BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780371|ref|YP_003064784.1| diaminopimelate decarboxylase protein [Candidatus Liberibacter asiaticus str. psy62] (431 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|254780371|ref|YP_003064784.1| diaminopimelate decarboxylase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040048|gb|ACT56844.1| diaminopimelate decarboxylase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 431 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 431/431 (100%), Positives = 431/431 (100%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK Sbjct: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY Sbjct: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS Sbjct: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL Sbjct: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT Sbjct: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP Sbjct: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL Sbjct: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 Query: 421 QKTPKQSSENY 431 QKTPKQSSENY Sbjct: 421 QKTPKQSSENY 431 >gi|83953467|ref|ZP_00962189.1| diaminopimelate decarboxylase [Sulfitobacter sp. NAS-14.1] gi|83842435|gb|EAP81603.1| diaminopimelate decarboxylase [Sulfitobacter sp. NAS-14.1] Length = 421 Score = 338 bits (867), Expect = 9e-91, Method: Composition-based stats. Identities = 205/421 (48%), Positives = 292/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L AE+V++ ++A V TPFY YST + +++ F +A DGMD +VCYA+K Sbjct: 1 MDHFLYRDGALFAEDVAISEIAAAVGTPFYVYSTATLLRHFKAFDDALDGMDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTLA G+G+D+VS GE RA AA VP ++IVFSGVGKT+ EI LAL+ GI Sbjct: 61 ANSNQAVLKTLAQAGAGMDVVSAGEYLRAKAAGVPGDKIVFSGVGKTVSEIRLALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ L+ A S+GK API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMEVLDAVARSMGKVAPITIRVNPDVDAKTHAKIATGKSENKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ +PG+++ G+D+HIGSQ+ + F A++ + +LT+QLR++GH I+ +D+GGGL Sbjct: 181 VYRMAAAMPGLEVVGIDVHIGSQLTDLTPFELAYQKVAELTEQLRADGHTIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +DY +++ + G+L C+I +EPGR + + G++V++VI +K + Sbjct: 241 GIPYERSNAAPPLPTDYGAMVQKTLGHLGCEIEIEPGRLIAGNAGLMVSEVIYVKSGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RP +Y+A+H+I +V DIVGP+CE+GD A R + Sbjct: 301 DFLIIDGAMNDLIRPAMYEAHHDIIPVVEAEAGAEQQPYDIVGPVCESGDTFAKQRMMPK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR LIPE++V+G QF +IR R TF E+I D+IP W Sbjct: 361 LVAGDLVAFRSAGAYGAVMASEYNSRALIPEVLVHGDQFAVIRRRPTFDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|83944426|ref|ZP_00956880.1| diaminopimelate decarboxylase [Sulfitobacter sp. EE-36] gi|83844749|gb|EAP82632.1| diaminopimelate decarboxylase [Sulfitobacter sp. EE-36] Length = 421 Score = 338 bits (867), Expect = 9e-91, Method: Composition-based stats. Identities = 204/421 (48%), Positives = 291/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L AE+V++ ++A V TPFY YST + +++ F +A DGMD +VCYA+K Sbjct: 1 MDHFLYRDGALLAEDVAISEIAAAVGTPFYVYSTATLLRHFKAFDDALDGMDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTLA G+G+D+VS GE RA AA VP ++IVFSGVGKT+ EI LAL+ GI Sbjct: 61 ANSNQAVLKTLAQAGAGMDVVSAGEYLRAKAAGVPGDKIVFSGVGKTVSEIRLALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ L+ A S+ K API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMEVLDAVARSMDKVAPITIRVNPDVDAKTHAKIATGKSENKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ +PG+++ G+D+HIGSQ+ + F A++ + +LT+QLR++GH I+ +D+GGGL Sbjct: 181 VYRMAAAMPGLEVVGIDVHIGSQLTDLTPFELAYQKVAELTEQLRADGHTIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +DY +++ + G+L C+I +EPGR + + G++V++VI +K + Sbjct: 241 GIPYERSNAAPPLPTDYGAMVQKTLGHLGCEIEIEPGRLIAGNAGLMVSEVIYVKSGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RP +Y+A+H+I +V DIVGP+CE+GD A R + Sbjct: 301 DFLIIDGAMNDLIRPAMYEAHHDIIPVVEAEAGAEQQPYDIVGPVCESGDTFAKQRMMPK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR LIPE++V+G QF +IR R TF E+I D+IP W Sbjct: 361 LAAGDLVAFRSAGAYGAVMASEYNSRALIPEVLVHGDQFAVIRRRPTFDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|84684125|ref|ZP_01012027.1| Orn/DAP/Arg decarboxylase, family 2 [Maritimibacter alkaliphilus HTCC2654] gi|84667878|gb|EAQ14346.1| Orn/DAP/Arg decarboxylase, family 2 [Rhodobacterales bacterium HTCC2654] Length = 421 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 206/421 (48%), Positives = 280/421 (66%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+VS+ +A V TPFY YS + ++Y F A GMD ++CYA+K Sbjct: 1 MDHFIYKDGVLHAEDVSITDIARSVGTPFYVYSAATLRRHYQVFDEALAGMDHLICYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+K + LG+G D+VS GE RRALAA +P +RIVFSGVGKT DE+ LAL++GI Sbjct: 61 ANSNLAVVKLMGDLGAGADVVSGGEYRRALAAGIPGDRIVFSGVGKTRDEMRLALENGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE EL LN+ A+S+ AP+ RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPELLALNEVAMSMDTVAPVTIRVNPDVDAKTHAKIATGKSENKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA LPGVK G+D+HIGSQ+ + F A++ + DLT LR +GH I +D+GGGL Sbjct: 181 VYAEIRGLPGVKAVGIDVHIGSQLTDLAPFRAAYEKVADLTHGLREDGHEIIRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +Y +I + G+L C+I +EPGR + + G++V+ VI +K + Sbjct: 241 GIPYETSNQAPPLPLEYGQVIRETVGDLGCEIEIEPGRLIAGNAGLMVSSVIYLKHGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP++YDA+H+I ++ A DIVGP+CETGD A R + Sbjct: 301 DFLILDSAMNDLVRPSMYDAHHDIVPVIEAAPGVEQAPHDIVGPVCETGDTFAKQRNLPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR LIPE++V+G F +IR R T++E++ D+IP W Sbjct: 361 LGAGDLVAFRSAGAYGAVMASEYNSRPLIPEVLVDGDHFAVIRARPTYEEMLARDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|332716389|ref|YP_004443855.1| Diaminopimelate decarboxylase [Agrobacterium sp. H13-3] gi|325063074|gb|ADY66764.1| Diaminopimelate decarboxylase [Agrobacterium sp. H13-3] Length = 422 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 250/421 (59%), Positives = 330/421 (78%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y +G LHAENV + ++A V TPFY YST +E++Y FS AF +D MVCYA+K Sbjct: 1 MNHFGYIDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYKVFSGAFADVDAMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++TLA LG+G+D+VS GELRRAL A VPA RI+FSGVGKT+ E+D AL++GIY Sbjct: 61 ANSNQAVLRTLAKLGAGIDVVSGGELRRALGAGVPANRIMFSGVGKTVAEMDYALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ESE EL+ LN RAV GK+A ++FR+NPD++A TH KISTGKKE+KFGI + + Sbjct: 121 CFNIESEPELEVLNLRAVKAGKRAHVSFRINPDVDARTHAKISTGKKENKFGISYERARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+TLPG++++G+DMHIGSQI +++ F AF+LLR+L + LR++GH I H+D+GGGL Sbjct: 181 VYAHAATLPGIEVTGIDMHIGSQITELQPFEDAFRLLRELVESLRADGHTISHVDIGGGL 240 Query: 241 GIAYHSDHRPPS-SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP YA ++ +L CKII EPGR +V + GILVT+VI +K +K Sbjct: 241 GIPYREDNNPPPLPDAYAHIVKNELKSLNCKIITEPGRLIVGNAGILVTEVIYVKDGGEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLY+AYH I +V PA D I ADIVGP+CETGD++AL+R++A Sbjct: 301 NFVIVDGAMNDLIRPTLYEAYHGIRPVVQPAVDAPRIKADIVGPVCETGDYLALDREMAA 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+PGDL+ + GAYGAVQ+GTYNSRLL+PE++V G +FH+IRPR T++ELI LDS+PAW Sbjct: 361 PQPGDLIAVSSAGAYGAVQAGTYNSRLLVPEVLVKGDKFHVIRPRGTYEELIALDSVPAW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|260431546|ref|ZP_05785517.1| diaminopimelate decarboxylase [Silicibacter lacuscaerulensis ITI-1157] gi|260415374|gb|EEX08633.1| diaminopimelate decarboxylase [Silicibacter lacuscaerulensis ITI-1157] Length = 421 Score = 336 bits (860), Expect = 6e-90, Method: Composition-based stats. Identities = 216/421 (51%), Positives = 293/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+LHAE+V + +A V TPFY YST + ++Y F A G D +VCYA+K Sbjct: 1 MDHFLYRDGALHAEDVPIAHIAEAVGTPFYIYSTATLLRHYRLFDEALAGTDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VS GE RA AA VP ++IVFSGVGKT +EI AL GI Sbjct: 61 AASNQAILKTLAQAGAGMDVVSGGEYLRAKAAGVPGDKIVFSGVGKTAEEIRTALTGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ +N A+ LG API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMEVINAVALELGVIAPITVRVNPDVDAKTHAKIATGKSENKFGIPIARAPQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A++LPG+K+ G+D+HIGSQ+ +E F A+ + +LT+QLR+ GH+I+ +D+GGGL Sbjct: 181 VYAHAASLPGLKVVGIDVHIGSQLTDLEPFRLAYSKVAELTEQLRAQGHDIRRLDLGGGL 240 Query: 241 GIAY-HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y S+ PP +Y ++I + G+L C+I +EPGR + + G++V+KVI +K + Sbjct: 241 GIPYARSNEAPPLPVEYGAMIKETLGHLGCEIEIEPGRLIAGNAGLMVSKVIYVKSGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +YDAYH+I ++ PA DIVGP+CETGD A R + Sbjct: 301 DFLILDGAMNDLIRPAMYDAYHDIVPVIEPAPGVEQRPYDIVGPVCETGDTFAKQRNMPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 RPGDL+ GAYGAV + YN+R LIPE++VNG QF +IR R TF E+I D+IP W Sbjct: 361 LRPGDLVAFRSAGAYGAVMASEYNTRPLIPEVLVNGDQFAVIRERPTFDEIINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|222149957|ref|YP_002550914.1| diaminopimelate decarboxylase [Agrobacterium vitis S4] gi|221736939|gb|ACM37902.1| diaminopimelate decarboxylase [Agrobacterium vitis S4] Length = 423 Score = 336 bits (860), Expect = 7e-90, Method: Composition-based stats. Identities = 243/421 (57%), Positives = 326/421 (77%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y +G LHAE+VS+ +A V TPFYCYST +E++Y FS AFDG+D+MVCYA+K Sbjct: 1 MNHFQYRDGILHAEDVSVPDIAKAVGTPFYCYSTATLERHYRVFSEAFDGVDSMVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL LG+G+D+VSEGELRRALAA +P RI+FSGVGKT E+DL L+ GIY Sbjct: 61 ANSNQAVLKTLGQLGAGVDVVSEGELRRALAAGIPPSRILFSGVGKTPSEMDLGLEVGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL LNQRA+ GK A ++FR+NPD++A TH KISTG+KE+KFGI + + Sbjct: 121 CFNVESEPELDVLNQRALKAGKTAHVSFRINPDVDAGTHAKISTGRKENKFGISYERARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A++L G+K++G+DMHIGSQI ++ F +AFKLLRDL LR+ GH I H+DVGGGL Sbjct: 181 VYARAASLEGIKVTGIDMHIGSQITDLQPFAEAFKLLRDLVTTLRAEGHTIDHVDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 ++ PP + YA+++ Q +L C+I+ EPGR +V + GILVT+VI +K +K Sbjct: 241 GIPYKDDNNPPPDPAAYAAIVKQQLASLDCRIVAEPGRLIVGNAGILVTEVIYVKDGGNK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLYDA+HE+ ++ A I AD+VGP+CETGD++AL+R++++ Sbjct: 301 TFVIVDAAMNDLIRPTLYDAHHELRPVLLSAASAPRIRADVVGPVCETGDYLALDREMSM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PRPGDL+ I GAYGAVQS TYN+R L+PE++V G QFH+IRPR +++++I LDS+P W Sbjct: 361 PRPGDLIAIGSAGAYGAVQSSTYNTRRLVPEVLVKGDQFHVIRPRPSYEDMIRLDSLPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|311693138|gb|ADP96011.1| diaminopimelate decarboxylase [marine bacterium HP15] Length = 416 Score = 335 bits (859), Expect = 9e-90, Method: Composition-based stats. Identities = 186/419 (44%), Positives = 258/419 (61%), Gaps = 4/419 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L+AE++ + +A TP Y YS +E++Y + +A +VCYA+K Sbjct: 1 MDHFNYRDGELYAEDIPVSAIADRFGTPAYVYSRATLERHYRAYDDALRDHPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LG+G DIVS GEL R L A R+VFSGVGK E+ AL+ G+ Sbjct: 61 ANSNLAVLNVLARLGAGFDIVSAGELERVLRAGGDPSRVVFSGVGKQEWEMKRALEVGVR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES++EL LN A LG KAPI+ RVNPD++A TH ISTG KE+KFGI I + Sbjct: 121 CFNVESDTELDRLNAVAGELGVKAPISLRVNPDVDAGTHPYISTGLKENKFGIDIAEASQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ +P + + GVD HIGSQ+ + F A + L L G +I H+D+GGGL Sbjct: 181 VYARAAGMPNLDVKGVDCHIGSQLTSVSPFLDALDRVLALIDSLADQGIHIHHLDMGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ +PP SDY + + G+ + ++ILEPGR + A+ GILVT+V +K + + Sbjct: 241 GVTYN-QEQPPQPSDYVKALAERLGDRKLELILEPGRSIAANAGILVTRVEFLKCTEHRN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ V P D D+VGP+CETGDF+ +R + Sbjct: 300 FAIIDAAMNDLIRPALYSAWQ-AIIPVKPHQDGEEKAWDLVGPVCETGDFLGKDRHL-RL 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + GAYG V S YN+R PE+MV+G Q H++R R T ++ + + +P Sbjct: 358 QAGDLLAVRSAGAYGFVMSSNYNTRNRPPELMVDGDQVHVVRRRETLEDQLAPESCLPE 416 >gi|206889561|ref|YP_002248957.1| diaminopimelate decarboxylase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741499|gb|ACI20556.1| diaminopimelate decarboxylase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 418 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 183/420 (43%), Positives = 267/420 (63%), Gaps = 3/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F + +G L+AE+V +++L + TP Y YS + ++ + AF + ++CYA+K Sbjct: 1 MHFFSHKKGELYAEDVPVKELINKFGTPLYIYSYGTLIRHIRAYEEAFCEVPHIICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN A+++ A LG G DIVS GEL +AL A + +IVF+GVGKT +EI+ AL++ I Sbjct: 61 ANSNLAILRIFAELGIGADIVSGGELFKALKAGIKPYKIVFAGVGKTDEEIEYALKNNIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE+EL +N++A +L K A +A RVNPDI+ THK I+TG K KFGIPI + Sbjct: 121 MFNVESEAELHKINEKAKNLKKVASVALRVNPDIDPKTHKYIATGLKSSKFGIPIEKALD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A ++ +K+ G+ HIGSQI + ++ +A + L QL + I++ID+GGGL Sbjct: 181 YYKLAKSMKNIKVIGIHKHIGSQITETSAYVEALNKILSLYDQLANYDMEIEYIDIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP + A ++ N + K+I+EPGR +V + GILVTKV+ K++ K Sbjct: 241 GITYRDE-EPPHPKELADVLIPLVKNKKGKLIIEPGRSIVGNAGILVTKVLYTKETEQKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I+D MND +RPTLY +YHEI + G + I ADIVGPICE+GDF+A +R+I Sbjct: 300 FIIVDAGMNDLIRPTLYGSYHEIQPVT--PGKKEKIVADIVGPICESGDFLAKDREIEKV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 G+ L + GAYG S YNSR + E++V G Q+ +IR R T+++LI + +P L Sbjct: 358 SAGEYLAVMSAGAYGFSMSSNYNSRPRVAEVLVKGDQYALIRKRETYKDLIRNEIVPEEL 417 >gi|15891339|ref|NP_357011.1| diaminopimelate decarboxylase [Agrobacterium tumefaciens str. C58] gi|15159724|gb|AAK89796.1| diaminopimelate decarboxylase [Agrobacterium tumefaciens str. C58] Length = 422 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 251/421 (59%), Positives = 332/421 (78%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y +G LHAENV + ++A V TPFY YST +E++Y FS AF +D MVCYA+K Sbjct: 1 MNHFGYIDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYKVFSGAFADVDAMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTLA LG+G+D+VS GELRRALAA VPA RI+FSGVGKT+ E+D AL++GIY Sbjct: 61 ANSNQAVLKTLAKLGAGIDVVSGGELRRALAAGVPASRIMFSGVGKTVAEMDYALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ESE EL+ LN RAV GK+A ++FR+NPD++A TH KISTGKKE+KFGI + + Sbjct: 121 CFNIESEPELEVLNLRAVKAGKRAHVSFRINPDVDARTHAKISTGKKENKFGISYERARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+TLPG++++G+DMHIGSQI +++ F AF+LLR+L + LR++GH I H+D+GGGL Sbjct: 181 VYAHAATLPGIEVTGIDMHIGSQITELQPFEDAFRLLRELVEVLRTDGHAISHVDIGGGL 240 Query: 241 GIAYHSDHRPPS-SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP YA ++ +L CKI+ EPGR +V + GILVT+VI +K DK Sbjct: 241 GIPYRDDNNPPPLPDAYAHIVKNELKSLNCKIVTEPGRLIVGNAGILVTEVIYVKDGGDK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYH I +V P+ + I ADIVGP+CETGD++AL+R++A Sbjct: 301 TFVIVDGAMNDLIRPTLYEAYHGIRPVVQPSENAPRIKADIVGPVCETGDYLALDREMAA 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+PGDL+ + GAYGAVQ+GTYNSRLL+PE++V G +FH+IRPR T++ELI LDS+PAW Sbjct: 361 PQPGDLIAVSSAGAYGAVQAGTYNSRLLVPEVLVKGDRFHVIRPRGTYEELIALDSVPAW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|83951152|ref|ZP_00959885.1| diaminopimelate decarboxylase [Roseovarius nubinhibens ISM] gi|83839051|gb|EAP78347.1| diaminopimelate decarboxylase [Roseovarius nubinhibens ISM] Length = 421 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 208/421 (49%), Positives = 294/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L+AE+V + ++A V TPFY YST +E+++ F A +G+D +VCYA+K Sbjct: 1 MDHFLYRDGELYAEDVPVAEIAAAVGTPFYVYSTATLERHFRLFDEALEGIDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA LG+G+D+VS GE RA+AA VP +RIVFSGVGKT DE+ AL GI Sbjct: 61 AASNQAILKTLARLGAGMDVVSGGEYARAIAAGVPGDRIVFSGVGKTRDEMRAALTGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ LN+ A+ LG +API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMAALNEVALELGTRAPITVRVNPDVDAKTHAKIATGKSENKFGIPIARARD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ +PG+++ G+D+HIGSQ+ +E F A++ + +LT+ LR+ GH+I+ +D+GGGL Sbjct: 181 VYAQAAAMPGLEVIGIDVHIGSQLTDLEPFRLAYRKVAELTETLRAEGHDIRRLDLGGGL 240 Query: 241 GIAY-HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y + PP +Y +I + G+L C+I +EPGR + + G++V++VI +K D+ Sbjct: 241 GIPYARGNEAPPLPVEYGKMIKEELGHLGCEIEIEPGRLVAGNAGLMVSRVIYVKSGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +YDA+H+I +V P D+VGP+CE+GD A R + + Sbjct: 301 EFLILDGAMNDLIRPAMYDAHHDIVPVVEPQAGAEQRPYDVVGPVCESGDTFAKGRNLPV 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV S YN+R LIPE++V+G QF +IR R +F E+I D+IP W Sbjct: 361 LNAGDLVAFRSAGAYGAVMSSEYNTRPLIPEVLVHGHQFAVIRARPSFDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|254487951|ref|ZP_05101156.1| diaminopimelate decarboxylase [Roseobacter sp. GAI101] gi|214044820|gb|EEB85458.1| diaminopimelate decarboxylase [Roseobacter sp. GAI101] Length = 421 Score = 334 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 205/421 (48%), Positives = 289/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L AE+V++ ++A V TPFY YST + +++ F +A +GMD +VCYA+K Sbjct: 1 MDHFLYRDGALFAEDVAISEIAATVGTPFYVYSTATLLRHFKAFDDALEGMDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++TLA G+G+D+VS GE RA AA VP ++IVFSGVGKT EI LAL+ GI Sbjct: 61 ANSNQAVLRTLAQAGAGMDVVSAGEYLRAKAAGVPGDKIVFSGVGKTAAEIRLALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ L+ A SLGK API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMEVLDTVARSLGKVAPITIRVNPDVDAKTHAKIATGKSENKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A + G+++ G+D+HIGSQ+ + F +A+ + +LT+ LR++GHNI+ +D+GGGL Sbjct: 181 VYRMAGAMAGLEVIGIDVHIGSQLTDLAPFEQAYDKVAELTEVLRADGHNIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP DY +++ + G+L C++ +EPGR + + G+++++VI +K + Sbjct: 241 GIPYERSNEAPPLPRDYGAMVQRKLGHLGCEVEIEPGRLIAGNAGLMISEVIYVKSGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +Y+A+H+I +V PA DIVGP+CE+GD A R + Sbjct: 301 DFLILDGAMNDLIRPAMYEAHHDIIPVVEPAPGAEQQPYDIVGPVCESGDTFAKQRMMPA 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV S YNSR LIPE++V QF +IRPR TF E+I D+IP W Sbjct: 361 LAAGDLVAFRSAGAYGAVMSSEYNSRALIPEVLVKDDQFAVIRPRPTFDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|99078471|ref|YP_611729.1| diaminopimelate decarboxylase [Ruegeria sp. TM1040] gi|99035609|gb|ABF62467.1| diaminopimelate decarboxylase [Ruegeria sp. TM1040] Length = 421 Score = 334 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 209/421 (49%), Positives = 292/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L+AE+V + ++A V TPFY YST + +++ F A +G D +VCYA+K Sbjct: 1 MDHFLYRDGALYAEDVPVAEIAATVGTPFYVYSTATLLRHFRLFDEALEGTDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VSEGE RRA AA VP ++IVFSGVGKT +EI AL GI Sbjct: 61 AASNQAILKTLAAAGAGMDVVSEGEYRRAKAAGVPGDKIVFSGVGKTAEEIRTALTGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ +N A+ LG API RVNPD++A TH KI+TGK E+KFGIPI + + Sbjct: 121 QFNVESEPEMDVINAVALELGVTAPITVRVNPDVDAKTHAKIATGKSENKFGIPIAKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A++LPG+++ G+D+HIGSQ+ +E F A++ + +LTQ LR++GH+I+ +D+GGGL Sbjct: 181 VYAHAASLPGLEVIGIDVHIGSQLTDLEPFRLAYQKVAELTQALRADGHDIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +Y +I + G+L C+I +EPGR + + G++V+KVI IK+ + Sbjct: 241 GIPYTRSNEAPPLPVEYGQMIKEELGHLGCEIEIEPGRLVAGNAGLMVSKVIYIKEGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +Y+A+H+I +V P DIVGP+CE+GD A R + Sbjct: 301 DFLILDGAMNDLIRPAMYEAHHDIIPVVEPTPGLEPQPYDIVGPVCESGDTFAKQRLMPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV S YNSR LIPE++V+G QF +IR R TF E+I D+IP W Sbjct: 361 LAAGDLVAFRSAGAYGAVMSSEYNSRPLIPEVLVHGDQFAVIRQRPTFDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|83643199|ref|YP_431634.1| diaminopimelate decarboxylase [Hahella chejuensis KCTC 2396] gi|83631242|gb|ABC27209.1| diaminopimelate decarboxylase [Hahella chejuensis KCTC 2396] Length = 423 Score = 334 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 184/419 (43%), Positives = 260/419 (62%), Gaps = 4/419 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L AE++S++++A TP Y YS +E++ + A DG M+CYA+K Sbjct: 1 MDHFEYRNHQLFAEDLSVQEIAEHYGTPCYIYSRATLERHLKAYQTAMDGYPHMICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LG+G DIVS GE+ R LAA ERIVFSGVGK E+ AL+ G++ Sbjct: 61 ANSNLAVLNVLARLGAGFDIVSVGEMERVLAAGGKPERIVFSGVGKLEHEMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L Q A +GKKAPI+ RVNPD++ TH ISTG KE+KFG+ I + Sbjct: 121 CFNVESAPELERLQQVAADMGKKAPISIRVNPDVDPQTHPYISTGLKENKFGVSIDEALE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY A+ P + + G+D HIGSQ+ QI F A + + ++ + LR+ G ++H+D+GGGL Sbjct: 181 LYHSAAVSPHLDVIGIDCHIGSQLTQISPFLDALERVLNIIETLRNEGIRLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ PP ++YA + + ++LEPGR + A+ G++VT+V +K + K Sbjct: 241 GVTYN-QETPPHPNEYARAVMERLKGSGLTLVLEPGRSIAANAGLMVTRVEYLKHNGHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP+LY A+ V + DIVGP+CETGDFI R + Sbjct: 300 FAIVDAAMNDLIRPSLYGAWQ-NIVPVRQHSEGKEARYDIVGPVCETGDFIGKERLLN-L 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS-IPA 418 +PGDLL + GAYG V S YNSR E+MV+G + +++R R T +EL + +P Sbjct: 358 KPGDLLAVRSAGAYGFVMSSNYNSRGRAAEVMVDGDKHYLVRRRETIEELFAGECALPE 416 >gi|110635369|ref|YP_675577.1| diaminopimelate decarboxylase [Mesorhizobium sp. BNC1] gi|110286353|gb|ABG64412.1| diaminopimelate decarboxylase [Chelativorans sp. BNC1] Length = 421 Score = 334 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 233/421 (55%), Positives = 322/421 (76%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y +G LHAENV + ++ V TPFYCYST +E++Y FS A G+D +VCYA+K Sbjct: 1 MNHFQYRDGVLHAENVPIPRITAAVGTPFYCYSTATLERHYRVFSEALSGLDALVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL +LG+G D+VS+GELRRALAA +PA +I+FSGVGKT +E+D AL +GI Sbjct: 61 ANSNQAVLKTLGNLGAGADVVSQGELRRALAAGIPANKILFSGVGKTGEEMDFALSAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L+ RA ++G KAP++ R+NPD++A THKKISTGK E+KFGIP + Sbjct: 121 CFNVESLPELELLSARARAIGVKAPVSLRINPDVDAKTHKKISTGKSENKFGIPWKDARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG++++G+DMHIGSQI +++ F +AF LL +LT+ LR++GH I+H+D+GGGL Sbjct: 181 AYARAASLPGLEVTGIDMHIGSQITELQPFDQAFALLTELTETLRADGHAIKHVDLGGGL 240 Query: 241 GIAYHSDHRPPS-SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 G+ Y D+ PP YA ++ ++ L K+I EPGR +V + G+L+++V+ +K+ K Sbjct: 241 GVPYREDNEPPPLPDAYAEVVRRHVTRLGLKVIFEPGRLIVGNAGVLISRVLYLKEGEGK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RPTLYDAYH I + PA D H+ AD+VGP+CETGDF+AL+R + Sbjct: 301 NFLIIDAAMNDLIRPTLYDAYHTIRPVAEPAADAPHLKADVVGPVCETGDFLALDRDLPR 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDL+ + GAYGAV S TYNSRLL+PE++VNG +FHI+RPR T+++LI LDS+P W Sbjct: 361 MEPGDLIAVGTAGAYGAVLSSTYNSRLLVPEVLVNGDRFHIVRPRPTYEQLIALDSLPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|259415035|ref|ZP_05738957.1| diaminopimelate decarboxylase [Silicibacter sp. TrichCH4B] gi|259348945|gb|EEW60699.1| diaminopimelate decarboxylase [Silicibacter sp. TrichCH4B] Length = 421 Score = 333 bits (854), Expect = 3e-89, Method: Composition-based stats. Identities = 209/421 (49%), Positives = 292/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+LHAE+V + ++A V TPFY YST + +++ F A +G D +VCYA+K Sbjct: 1 MDHFLYRDGALHAEDVPVAEIAATVGTPFYVYSTATLLRHFRLFDEALEGTDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VSEGE RRA AA VP ++IVFSGVGKT DEI AL GI Sbjct: 61 AASNQAILKTLAAAGAGMDVVSEGEYRRAKAAGVPGDKIVFSGVGKTADEIRCALSGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ +N A+ LG API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMEVINAVALELGTTAPITVRVNPDVDAKTHAKIATGKSENKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A++LPG+++ G+D+HIGSQ+ ++ F A++ + +LTQ LR +GH+I+ +D+GGGL Sbjct: 181 VYAHAASLPGLEVIGIDVHIGSQLTELAPFRLAYQKVAELTQALRDDGHDIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +Y +I + G+L C+I +EPGR + + G++V+KVI +K+ + Sbjct: 241 GIPYTRSNEAPPLPVEYGQMIKEELGHLGCEIEIEPGRLVAGNAGVMVSKVIYVKEGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +Y+AYH+I +V P DIVGP+CE+GD A R++ Sbjct: 301 DFLILDGAMNDLIRPAMYEAYHDIIPVVEPTPGLEPKPYDIVGPVCESGDTFAKQRQMPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR LIPE++V+G QF +IR R TF E+I D+IP W Sbjct: 361 LGAGDLVAFRSAGAYGAVMASEYNSRPLIPEVLVHGDQFAVIRQRPTFDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|126740531|ref|ZP_01756218.1| diaminopimelate decarboxylase [Roseobacter sp. SK209-2-6] gi|126718332|gb|EBA15047.1| diaminopimelate decarboxylase [Roseobacter sp. SK209-2-6] Length = 421 Score = 333 bits (854), Expect = 3e-89, Method: Composition-based stats. Identities = 201/421 (47%), Positives = 287/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L+AE+V + ++A V TPFY YST + +++ F A +G + +VCYA+K Sbjct: 1 MDHFLYRDGALYAEDVPVAEIAAAVGTPFYVYSTATLLRHFRLFDEALEGTEHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VS+GE RA AA VP +RIVFSGVGKT++E+ +AL GI Sbjct: 61 AASNQAILKTLAQAGAGMDVVSQGEYLRAKAAGVPGDRIVFSGVGKTMEEVRVALSGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ +N A+ LG API R+NPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMAVINAVALELGVIAPITIRINPDVDAKTHAKIATGKSENKFGIPISRAKE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A++LPG+++ G+D HIGSQ+ +E F A++ + +LT+ LR+ GH+I+ +D+GGGL Sbjct: 181 VYAHAASLPGLEVVGIDCHIGSQLTDLEPFRLAYEKVAELTEVLRAEGHDIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +Y LI G+L C+I +EPGR + + G++V+KVI +K + Sbjct: 241 GIPYERSNEAPPLPVEYGQLIKDTLGHLGCEIEIEPGRLIAGNAGLMVSKVIYVKSGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RP +Y+A+H+I + PA DIVGP+CETGD A R + Sbjct: 301 DFLIVDGAMNDLIRPAMYEAHHDIVAVDEPAPGVEQQPYDIVGPVCETGDTFAKERMMPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR LIPE++V+G QF +IR R + E+I D+IP W Sbjct: 361 LAAGDLIAFRSAGAYGAVMASEYNSRPLIPEVLVHGDQFAVIRRRPDYDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|190893634|ref|YP_001980176.1| diaminopimelate decarboxylase [Rhizobium etli CIAT 652] gi|190698913|gb|ACE92998.1| diaminopimelate decarboxylase protein [Rhizobium etli CIAT 652] Length = 422 Score = 332 bits (852), Expect = 5e-89, Method: Composition-based stats. Identities = 252/421 (59%), Positives = 330/421 (78%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y +G LHAENV + ++A V TPFY YST +E++Y FS AF MD+MVCYA+K Sbjct: 1 MNHFEYRDGILHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL LG+G+D+VSEGELRRALAA +PA RI+FSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ LNQRAVS GKKAP++FR+NPD++A TH KISTGKKE+KFGI + + Sbjct: 121 CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+ LPG++++G+DMHIGSQI +++ F AFKLLRDL LR++GH I H+D+GGGL Sbjct: 181 IYAHAAKLPGIEVTGIDMHIGSQITELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGL 240 Query: 241 G-IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 G ++ PP YA+++ +L CK+I EPGR +V + GILVT+V+ +K +K Sbjct: 241 GVPYKDDNNPPPLPDAYAAIVKNQLRDLNCKVITEPGRLIVGNAGILVTEVLYVKDGGEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYHEI + A + I AD+VGP+CETGD++AL+R++A+ Sbjct: 301 TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+PGDLL + GAYGAVQ+GTYNSRLL+PE++V G FH IRPR T+ ELI LDS+PAW Sbjct: 361 PKPGDLLAVSTAGAYGAVQAGTYNSRLLVPEVLVKGGDFHAIRPRRTYAELISLDSVPAW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|120553431|ref|YP_957782.1| diaminopimelate decarboxylase [Marinobacter aquaeolei VT8] gi|120323280|gb|ABM17595.1| diaminopimelate decarboxylase [Marinobacter aquaeolei VT8] Length = 416 Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats. Identities = 186/419 (44%), Positives = 261/419 (62%), Gaps = 4/419 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G L+AE+V++ +A TP Y YS +E++Y + A +VCYA+K Sbjct: 1 MDHFNYRNGELYAEDVAVADIAERFGTPAYIYSRATLERHYRAYDEALKNRPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LG+G DIVS GEL R L A A ++VFSGVGK E+ AL++G+ Sbjct: 61 ANSNLAVLNVLARLGAGFDIVSAGELERVLRAGGDAGKVVFSGVGKQEWEMKRALEAGVR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES++EL LN+ A LG KAPI+ RVNPD++A TH ISTG KE+KFGI I + + Sbjct: 121 CFNVESDTELDRLNKVAGELGVKAPISLRVNPDVDAGTHPYISTGLKENKFGIDIAEAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A++LP + I GVD HIGSQ+ + F A + L L G I+H+D+GGGL Sbjct: 181 VYARAASLPNLDIHGVDCHIGSQLTSVSPFLDALGRVLSLIDTLAEQGIRIRHLDMGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ PP +DY +++ G+ + +++LEPGR + A+ GILVT+V +K + + Sbjct: 241 GVTYN-QETPPQPADYVKALNERMGDRELELVLEPGRSIAANAGILVTRVEFLKCTEHRN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ V P D D+VGP+CETGDF+ +R + Sbjct: 300 FAIIDAAMNDLIRPALYSAWQ-AIIPVQPHQDSEERPWDLVGPVCETGDFLGKDRAL-RL 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + GAYG V + YN+R PE+MV+G Q H++R R T + + + +P Sbjct: 358 KAGDLLAVRSAGAYGFVMASNYNTRNRPPELMVDGDQVHVVRRRETLDDQLAPESCLPE 416 >gi|254713605|ref|ZP_05175416.1| diaminopimelate decarboxylase [Brucella ceti M644/93/1] gi|254716041|ref|ZP_05177852.1| diaminopimelate decarboxylase [Brucella ceti M13/05/1] gi|261217809|ref|ZP_05932090.1| diaminopimelate decarboxylase [Brucella ceti M13/05/1] gi|261321343|ref|ZP_05960540.1| diaminopimelate decarboxylase [Brucella ceti M644/93/1] gi|260922898|gb|EEX89466.1| diaminopimelate decarboxylase [Brucella ceti M13/05/1] gi|261294033|gb|EEX97529.1| diaminopimelate decarboxylase [Brucella ceti M644/93/1] Length = 420 Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats. Identities = 239/420 (56%), Positives = 319/420 (75%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G LHAENVSL ++A V TPFY YS IE+++ F +AF MDT+V YALK Sbjct: 1 MNHFEYRNGVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ LA LG+G D VS+GE+RRALAA +PA RIVFSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLTALAKLGAGADTVSQGEIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE ELK L+ RAV+ GK AP++ R+NPD++A TH KISTGK E+KFGIP + + Sbjct: 121 CFNVESEPELKILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ +L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y +D+ PP YA ++ ++ L K + EPGR +V + G+LVT+VI +K+ K Sbjct: 241 GIPYRTDNTPPPPVAYAQIVAKHIKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D AMND +RPTLYDA+H+I ++ P + I AD VGP+CETGD++ L+R++A P Sbjct: 301 FVIVDAAMNDLIRPTLYDAFHDIRPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKP 360 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 PGDL+ I TGAYGAV S TYNSRLLIPE++V+G ++H++RPR T++EL+ LDS+P WL Sbjct: 361 APGDLIAICTTGAYGAVLSSTYNSRLLIPEVLVDGERYHVVRPRRTYEELLALDSVPDWL 420 >gi|150397736|ref|YP_001328203.1| diaminopimelate decarboxylase [Sinorhizobium medicae WSM419] gi|150029251|gb|ABR61368.1| diaminopimelate decarboxylase [Sinorhizobium medicae WSM419] Length = 422 Score = 332 bits (850), Expect = 7e-89, Method: Composition-based stats. Identities = 253/421 (60%), Positives = 327/421 (77%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y +G L+AE+V L ++A V TPFYCYST +E++Y FS AF +D MVCYA+K Sbjct: 1 MNHFQYRDGILYAEDVPLTEIARAVGTPFYCYSTATLERHYKVFSQAFADVDAMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL LG+GLD+VSEGELRRALAA +P RI+FSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLKTLGRLGAGLDVVSEGELRRALAAGIPPSRIMFSGVGKTAREMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ LNQR V GK+AP++FR+NPD++A TH KISTGKKE+KFGI + S Sbjct: 121 CFNVESEPELEVLNQRGVRAGKRAPVSFRINPDVDARTHAKISTGKKENKFGISWERARS 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+TLPG++++G+DMHIGSQI +++ F AFKLLR+L LRS+GH I+H+D+GGGL Sbjct: 181 VYAHAATLPGIEVTGIDMHIGSQITELQPFDDAFKLLRELVDTLRSDGHVIEHVDLGGGL 240 Query: 241 GIAYHSDHRPPS-SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP YA ++ L CKI+ EPGR +V + GILVT+V+ +K DK Sbjct: 241 GIPYREDNNPPPLPDAYADVVKNQLKGLDCKIVTEPGRLIVGNAGILVTEVVYVKDGGDK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYHEI + A I AD+VGP+CETGD++AL+R++A+ Sbjct: 301 TFVIVDGAMNDLIRPTLYEAYHEIRPVRISAASAPRIKADVVGPVCETGDYLALDREMAM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PR GDLL I GAYGAVQ+GTYNSRLL+PE++V G +FH+IRPR + ELI LDS+P W Sbjct: 361 PRAGDLLAIGSAGAYGAVQAGTYNSRLLVPEVLVKGDRFHVIRPRKDYDELIGLDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|316936209|ref|YP_004111191.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris DX-1] gi|315603923|gb|ADU46458.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris DX-1] Length = 421 Score = 332 bits (850), Expect = 8e-89, Method: Composition-based stats. Identities = 216/421 (51%), Positives = 290/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE VSL +A V TPFYCYST +E++Y F+ AF G+D +VCYA+K Sbjct: 1 MRHFDYRDGVLHAEGVSLASIAKDVGTPFYCYSTATLERHYRVFTEAFAGLDALVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++TLA LG+G D+VS GEL+RALAA +P +IVFSGVGKT E+ AL I Sbjct: 61 ANSNQSVLRTLARLGAGADVVSGGELQRALAAGIPPGKIVFSGVGKTEAELRAALAHDIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVESE EL+ L++ AV G+ A I+ RVNPD+++ TH KISTGK E+KFGIPI Sbjct: 121 CLNVESEPELELLSRLAVETGRTARISLRVNPDVDSGTHAKISTGKSENKFGIPIRHARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG++++GVD+HIGSQI + AF+ + + LR +GH + H+D GGGL Sbjct: 181 VYARAARLPGIQVTGVDVHIGSQIIDLAPMEAAFRKVAEFVHVLRGDGHTVSHVDFGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 Y PP YA ++ + NL C ++ EPGR +V + GILV +VI +K K Sbjct: 241 GIPYYEDRDAPPEPFAYAEMVKRVTHNLGCALLFEPGRMIVGNAGILVARVIYVKHGDGK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYHEI + PA + AD+VGP+CETGD++AL+RK+ Sbjct: 301 TFVIIDAAMNDLIRPTLYEAYHEIVAVQQPAPGAASMVADVVGPVCETGDYLALDRKLPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ I +GAYGAVQ+ TYN+R L+PE++V Q ++RPR T ++LI +D W Sbjct: 361 LKAGDLIAIMTSGAYGAVQACTYNTRPLVPEVLVKDDQVAVVRPRFTVEQLIAMDQPAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|77359070|ref|YP_338645.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis TAC125] gi|76873981|emb|CAI85202.1| putative diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis TAC125] Length = 417 Score = 332 bits (850), Expect = 8e-89, Method: Composition-based stats. Identities = 193/416 (46%), Positives = 261/416 (62%), Gaps = 1/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE+VS+ +A TP Y YS E++YL F+NA ++VCYA+K Sbjct: 1 MDFFNYKNNQLFAEDVSIASIAQQYGTPCYVYSRATFERHYLAFANATKNHKSLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS+GEL R + A A ++VFSGV KT DEI AL+ GI Sbjct: 61 ANSNIAVLNILARLGSGFDIVSKGELARVIKAGGDASKVVFSGVAKTADEIAYALKLGIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SEL+ +++ A L API+ RVNPDI+A TH ISTG KE+KFGI I S Sbjct: 121 CFNVESVSELERISEVACELNLAAPISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVS 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y +A++LPG+ I GVD HIGSQ+ + F +A L L +L++ + H+D+GGGL Sbjct: 181 VYQHAASLPGLNIIGVDCHIGSQLTETRPFLEALDKLLTLIDELKACNIELTHLDIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P S A + + ++I EPGR + A+ G+LVT+V IK++ DK Sbjct: 241 GVTYNDEQPPHPSEYAAQVTERLVNYRHLELIFEPGRAIAANAGVLVTQVEFIKQNQDKY 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY A+ +I + + + DIVGP+CETGDF+ +R++A Sbjct: 301 FAIVDAGMNDMLRPALYQAWQKIIPVSVRDDETPTHNFDIVGPVCETGDFLGKDRELA-L 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL GAYG S YNSR + EIMV+GSQ H+IR R T + L + + I Sbjct: 360 KQGDLLVQRSAGAYGFTMSSNYNSRPRVAEIMVDGSQHHLIRERETIESLYQGEKI 415 >gi|149376983|ref|ZP_01894737.1| diaminopimelate decarboxylase [Marinobacter algicola DG893] gi|149358760|gb|EDM47230.1| diaminopimelate decarboxylase [Marinobacter algicola DG893] Length = 416 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 186/419 (44%), Positives = 260/419 (62%), Gaps = 4/419 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G L AENV++E +A TP Y YS +E++Y + +A G +VCYA+K Sbjct: 1 MDHFNYRSGELFAENVAVEDIARRFGTPAYVYSRATLERHYRAYDDALAGRPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LG+G DIVS GEL R + A + VFSGVGK E+ AL++G+ Sbjct: 61 ANSNIAVLNVLARLGAGFDIVSAGELERVIRAGGDPAKTVFSGVGKQRWEMRRALEAGVR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES++EL LN+ A LG +AP++ RVNPD++A TH ISTG KE+KFGI I + + Sbjct: 121 CFNVESDTELDRLNEVAGELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIAEAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ + + I GVD HIGSQ+ + F A + +L L NI+H+D+GGGL Sbjct: 181 VYERAAAMANLDIQGVDCHIGSQLTSVSPFLDALDRVLELIDTLAKKNINIRHLDMGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y +PP SDY + + + G+ ++I+EPGR + A+ GIL+T+V +K + + Sbjct: 241 GVTY-DQEQPPQPSDYVTALAERLGDRSLELIMEPGRSIAANAGILLTRVEFLKCTEHRN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D AMND +RP LY A+ V P D H D+VGP+CETGDF+ +RK+ Sbjct: 300 FAITDAAMNDLIRPALYSAWQ-SIIPVTPRNDGDEKHWDLVGPVCETGDFLGKDRKL-RL 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + GAYG V S YN+R PE+MV+G Q H++R R T +E + + +P Sbjct: 358 QAGDLLAVRSAGAYGFVMSSNYNTRNRPPELMVDGEQVHVVRRRETLEEQLGPESCLPE 416 >gi|209551143|ref|YP_002283060.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536899|gb|ACI56834.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 422 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 249/421 (59%), Positives = 326/421 (77%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y +G LHAENV + ++A V TPFY YST +E++Y FS AF MD+MVCYA+K Sbjct: 1 MNHFEYRDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL LG+G+D+VSEGELRRALAA +PA RI+FSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLKTLGRLGAGIDVVSEGELRRALAAGIPASRIMFSGVGKTPQEMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ LNQRAV G KAP++FR+NPD++A TH KISTGKKE+KFGI + + Sbjct: 121 CFNVESEPELEILNQRAVKAGTKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+ LPG++++G+DMHIGSQI +++ F AFKLL DL LR++GH I H+D+GGGL Sbjct: 181 IYAHAARLPGIEVTGIDMHIGSQITELQPFDDAFKLLHDLVATLRADGHTIDHVDIGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 ++ PP YA+++ L CKII EPGR +V + GILVT+V+ +K +K Sbjct: 241 GIPYKDDNNPPPLPDAYAAIVKNQLRGLNCKIITEPGRLIVGNAGILVTEVLYVKDGGEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYHEI + A + I AD+VGP+CETGD++AL+R++A+ Sbjct: 301 TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+PGDL+ + GAYGAVQ+GTYNSRLL+PE++V GS FH IRPR T+ ELI LDS+PAW Sbjct: 361 PKPGDLIAVSTAGAYGAVQAGTYNSRLLVPEVLVKGSDFHTIRPRRTYAELIGLDSVPAW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|85859277|ref|YP_461479.1| diaminopimelate decarboxylase [Syntrophus aciditrophicus SB] gi|85722368|gb|ABC77311.1| diaminopimelate decarboxylase [Syntrophus aciditrophicus SB] Length = 427 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 190/427 (44%), Positives = 273/427 (63%), Gaps = 3/427 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y + L EN+ + ++A V TPFY YS + ++ F+ AF + +++C+A+K Sbjct: 1 MNDFLYKDQQLWCENIPVSQIAEEVGTPFYLYSHATLRNHFRVFAEAFAKVPSIICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV++ L G G+DIVS GEL RAL A V ++V+SGVGK +DEI+ AL+SGI Sbjct: 61 ANSNLAVLRVLIAEGGGVDIVSGGELYRALQAGVEPGKVVYSGVGKRVDEIEYALRSGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ +N+ A +LG A IA RVNPD++ TH ISTG KE+KFGI I + Sbjct: 121 MFNVESLQELEVINRCAQNLGVSAGIALRVNPDVDPKTHPHISTGLKENKFGIDIERSLE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y +A +L + I GV HIGSQ+ ++ F +A + L L QL+ +I+++D+GGGL Sbjct: 181 TYRHARSLQHLDIRGVSCHIGSQVTRLSPFLEALERLSLLVHQLKREDFDIRYVDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ PP S+YA I + +L C I EPGR +V + GILVT+V+ K + +K Sbjct: 241 GITYN-QEMPPHPSEYAKAILETSRDLDCTFIFEPGRVIVGNAGILVTRVLYTKSNDNKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I+D MND +RP+LY+++H I ++ +R I AD+VGPICE+GD++A RK+ Sbjct: 300 FIIVDAGMNDLVRPSLYNSFHAIRPVIE--ENRKEIIADVVGPICESGDYLAKARKLKDF 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 GDLL + GAYG + YNSR IPEIMV Q++++R R T+ +LI + IPA+L Sbjct: 358 HRGDLLAVFSAGAYGFTMASNYNSRPRIPEIMVREDQYYVVRRRETYADLISHEEIPAFL 417 Query: 421 QKTPKQS 427 + Sbjct: 418 KNKAISR 424 >gi|241206546|ref|YP_002977642.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860436|gb|ACS58103.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 422 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 251/421 (59%), Positives = 328/421 (77%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y +G LHAENV + ++A V TPFY YST +E++Y FS AF MD+MVCYA+K Sbjct: 1 MNHFEYRDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL LG+G+D+VSEGELRRALAA +PA RI+FSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ LNQRAVS GKKAP++FR+NPD++A TH KISTGKKE+KFGI + + Sbjct: 121 CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+ LPG++++G+DMHIGSQI +++ F AFKLL DL LR++GH I H+D+GGGL Sbjct: 181 IYAHAAKLPGIEVTGIDMHIGSQITELQPFDDAFKLLHDLVATLRADGHTIHHVDIGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 ++ PP YA+++ L CKII EPGR +V + GILVT+V+ +K +K Sbjct: 241 GIPYKDDNNPPPLPDAYAAIVKNQLRGLNCKIITEPGRLIVGNAGILVTEVLYVKDGGEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYHEI + A + I AD+VGP+CETGD++AL+R++A+ Sbjct: 301 TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+PGDL+ + GAYGAVQ+GTYNSRLL+PE++V GS FH IRPR T+ ELI LDS+PAW Sbjct: 361 PKPGDLMAVSTAGAYGAVQAGTYNSRLLVPEVLVRGSDFHTIRPRRTYAELISLDSVPAW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|86359380|ref|YP_471272.1| diaminopimelate decarboxylase protein [Rhizobium etli CFN 42] gi|86283482|gb|ABC92545.1| diaminopimelate decarboxylase protein [Rhizobium etli CFN 42] Length = 422 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 248/421 (58%), Positives = 329/421 (78%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y +G L+AENV + ++A V TPFY YST +E++Y FS AF +D+MVCYA+K Sbjct: 1 MNHFDYRDGILYAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADVDSMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL LG+G+D+VSEGELRRALAA +PA RI+FSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLKTLGRLGAGIDVVSEGELRRALAAGIPANRIMFSGVGKTPQEMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ LNQRAV+ GK AP++FR+NPD++A TH KISTGKKE+KFGI + + Sbjct: 121 CFNVESEPELEILNQRAVNAGKTAPVSFRINPDVDAKTHAKISTGKKENKFGISWDRARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+ LPG++++G+DMHIGSQI +++ F AFKLL DL LR++GH+I H+D+GGGL Sbjct: 181 IYAHAAKLPGIEVTGIDMHIGSQITELQPFDDAFKLLSDLVATLRADGHSIHHVDIGGGL 240 Query: 241 G-IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 G ++ PP YA+++ L CKII EPGR +V + GILVT+V+ +K +K Sbjct: 241 GVPYKDDNNPPPLPDAYAAIVKNQLRGLNCKIITEPGRLIVGNAGILVTEVLYVKDGGEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYHEI + A + I AD+VGP+CETGD++AL+R++A+ Sbjct: 301 TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+PGDL+ + GAYGAVQ+GTYNSRLL+PE++V GS FH+IRPR T+ ELI LDS+PAW Sbjct: 361 PKPGDLMAVSTAGAYGAVQAGTYNSRLLVPEVLVKGSDFHVIRPRRTYAELISLDSVPAW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|291278645|ref|YP_003495480.1| diaminopimelate decarboxylase [Deferribacter desulfuricans SSM1] gi|290753347|dbj|BAI79724.1| diaminopimelate decarboxylase [Deferribacter desulfuricans SSM1] Length = 417 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 187/420 (44%), Positives = 272/420 (64%), Gaps = 3/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G + E V L+K+A V TPFY YS +++++ F +F+ + ++C+A+K Sbjct: 1 MHHFHYKDGEMFCEEVPLKKIAAEVGTPFYVYSAATLKRHFEVFDASFEEVPHIICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ L L G DIVS GEL RAL A + ++IV++GVGKT +EI+ AL+S I Sbjct: 61 ANSNLAVLNLLGKLSCGADIVSGGELYRALKAGIDPKKIVYAGVGKTEEEIEFALKSDIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN+ES EL+ +N+ A L KKA IA RVNP+++ TH ISTG K++KFGIPI + Sbjct: 121 MFNIESFQELEKINEVAGRLKKKARIALRVNPNVDPKTHPYISTGLKKNKFGIPIENAYQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++L +++ G HIGSQ+ +I F A K++ D+ + L+S G NI+++D+GGGL Sbjct: 181 EYEYAASLDNIEVVGAHCHIGSQLTEISPFVDATKIMVDMIKTLKSKGINIKYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ + PPS +YA I L ++ EPGR + + G+LVT+V+ K++ K Sbjct: 241 GIKYNEE-MPPSPKEYADKIIDVIRGLDVTLVFEPGRVIAGNAGVLVTRVLYTKETELKH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND MRP LY ++H+I + G ++ DIVGPICETGDF+A +R + Sbjct: 300 FKIVDAAMNDLMRPILYGSFHDIKPVKE--GHYKTVYGDIVGPICETGDFLAKDRNLPDF 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 + GDL+ + GAYG S YNSR +PEI+VN +++I+R R T+ +LI +SIP L Sbjct: 358 QQGDLIAVMSAGAYGFTMSSNYNSRPRVPEILVNKDKYYIVRRRETYDDLIGPESIPEDL 417 >gi|116254060|ref|YP_769898.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. viciae 3841] gi|115258708|emb|CAK09813.1| putative diaminopimelate decarboxylase [Rhizobium leguminosarum bv. viciae 3841] Length = 422 Score = 331 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 251/421 (59%), Positives = 328/421 (77%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y +G LHAENV + ++A V TPFY YST +E++Y FS AF MD+MVCYA+K Sbjct: 1 MNHFEYRDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL LG+G+D+VSEGELRRALAA +PA RI+FSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPANRIMFSGVGKTPSEMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ LNQRAVS GKKAP++FR+NPD++A TH KISTGKKE+KFGI + + Sbjct: 121 CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+ LPG++++G+DMHIGSQI +++ F AFKLL DL LR++GH I H+D+GGGL Sbjct: 181 IYAHAARLPGIEVTGIDMHIGSQITELQPFDDAFKLLHDLVATLRADGHTIHHVDIGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 ++ PP YA+++ L CKII EPGR +V + GILVT+V+ +K +K Sbjct: 241 GIPYKDDNNPPPLPDAYAAIVKNQLRGLDCKIITEPGRLIVGNAGILVTEVLYVKDGGEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYHEI + A + I AD+VGP+CETGD++AL+R++A+ Sbjct: 301 TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+PGDL+ + GAYGAVQ+GTYNSRLL+PE++V GS FH IRPR T+ ELI LDS+PAW Sbjct: 361 PKPGDLMAVSTAGAYGAVQAGTYNSRLLVPEVLVRGSDFHTIRPRRTYAELISLDSVPAW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|116747509|ref|YP_844196.1| diaminopimelate decarboxylase [Syntrophobacter fumaroxidans MPOB] gi|116696573|gb|ABK15761.1| diaminopimelate decarboxylase [Syntrophobacter fumaroxidans MPOB] Length = 434 Score = 331 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 184/427 (43%), Positives = 265/427 (62%), Gaps = 3/427 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L+ E V L +LA V TP Y YS + ++ F +AF+G+ + C+++K Sbjct: 11 MHHFHYHNDELYCERVPLRELAARVGTPCYVYSHATLLHHFTVFDSAFEGVPHLTCFSVK 70 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV++ LG G+DIVS GEL RA A + ++IV+SGVGKT++EID AL+ I Sbjct: 71 ANSNLAVLRLFGSLGGGVDIVSGGELYRARQAGIAPDKIVYSGVGKTLEEIDYALRENIL 130 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN+ES EL+ +N RA + G +A IA RVNPD++ NTH ISTG K++KFGI I Sbjct: 131 MFNIESTQELEAINARAAAFGCRARIALRVNPDVDPNTHPYISTGMKKNKFGIEIDSAVK 190 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A +L V++ GVD HIGSQ+ +I F A K LR L ++L + G IQ++D+GGGL Sbjct: 191 AYERARSLDHVEVVGVDCHIGSQLTEISPFVDALKRLRLLIEKLEAVGITIQYLDLGGGL 250 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y PP +YA I + + C +I EPGR +V + G+L+ +V+ K++ K+ Sbjct: 251 GIVY-DQEAPPEPREYARAILRELKGMHCTLIFEPGRVIVGNAGVLLARVLYTKRTQSKS 309 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I D AMND +RP+LY +YH++ + R D+VGPICE+GDFIA +R + + Sbjct: 310 FIITDTAMNDLIRPSLYGSYHQVQPLRRQ--SRESHIVDVVGPICESGDFIAKDRGLPMV 367 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 GD L + GAYG S YNSR E++V ++ +IR R T+ +LI+ ++IPA+L Sbjct: 368 ESGDFLAVMSAGAYGFTMSSNYNSRPRAAEVLVKDDRYFVIRRRETWDDLIQCETIPAFL 427 Query: 421 QKTPKQS 427 + + Sbjct: 428 SSDKQPA 434 >gi|163744294|ref|ZP_02151654.1| diaminopimelate decarboxylase [Oceanibulbus indolifex HEL-45] gi|161381112|gb|EDQ05521.1| diaminopimelate decarboxylase [Oceanibulbus indolifex HEL-45] Length = 421 Score = 331 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 216/421 (51%), Positives = 293/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+VSL ++A V TP Y YST + +++ F +A GMD +VCYA+K Sbjct: 1 MDHFLYKDGVLHAEDVSLAEIAAAVGTPVYVYSTATLLRHFHLFDDALSGMDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++TLA G+G+D+VS GE RRA AA V +RIVFSGVGKT +EI+LAL GI Sbjct: 61 ANSNQAVLRTLAQAGAGMDVVSGGEYRRAKAAGVAGDRIVFSGVGKTREEIELALTGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ L+ A LGK API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMILLDIVARELGKVAPITIRVNPDVDAKTHAKIATGKSENKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+TLPG++I G+D+HIGSQ+ + F +A+ + +LT+ LR++GHNI+ +D+GGGL Sbjct: 181 VYAMAATLPGLEIIGIDVHIGSQLTDLAPFEQAYGKVAELTEVLRADGHNIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +DY +++ + G+L C+I +EPGR + + G+LV++VI +K + Sbjct: 241 GIPYERSNSAPPLPTDYGAMVQRTLGHLDCEIEIEPGRLIAGNAGVLVSEVIYLKSGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +YDA+H+I + PA DIVGP+CE+GD A R + + Sbjct: 301 DFLILDAAMNDLIRPAMYDAWHDIVPLNEPAPGAEPRPVDIVGPVCESGDTFAKQRMMPV 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV S YNSR LIPE++VNG QF +IRPR +F E+I D+IP W Sbjct: 361 LGSGDLVAFRSAGAYGAVMSSEYNSRPLIPEVLVNGDQFAVIRPRPSFDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|153008332|ref|YP_001369547.1| diaminopimelate decarboxylase [Ochrobactrum anthropi ATCC 49188] gi|151560220|gb|ABS13718.1| diaminopimelate decarboxylase [Ochrobactrum anthropi ATCC 49188] Length = 421 Score = 331 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 234/421 (55%), Positives = 311/421 (73%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F++ G LHAENVSL ++A V TPFY YS IE+++ FS AF GM+T+V YALK Sbjct: 1 MNHFEHRNGVLHAENVSLPEIAQAVGTPFYVYSRATIERHFRVFSEAFAGMETLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+KTLA LG+G D VSEGE+RRALAA +PA +IVFSGVGKT E+D AL++GIY Sbjct: 61 ANSNLAVLKTLAKLGAGADTVSEGEIRRALAAGIPANKIVFSGVGKTPHEMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV GK A ++ R+NPD++A TH KISTGK E+KFGIP + Sbjct: 121 CFNVESEPELEILSARAVKAGKVASVSLRINPDVDAKTHAKISTGKSENKFGIPRVKARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLDVVGIDMHIGSQIIDLEPFDNAFALMAQLVKELQADGHNIRHVDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L K + EPGR +V + G+LVT+VI +K+ K Sbjct: 241 GIPYRTDNTPPPLPVAYAEIVAKHIKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+H+I + P D I AD VGP+CETGD++ L+R++A Sbjct: 301 NFVIVDAAMNDLIRPTLYDAFHDIKPVTLPKDDAPRIRADFVGPVCETGDYLGLDREVAK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ + TGAYGAV S TYNSRLLIPE++V+G ++H++RPR T++EL+ LDS+P W Sbjct: 361 PAPGDLIAVCTTGAYGAVLSSTYNSRLLIPEVLVDGDRYHVVRPRRTYEELLALDSVPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|227823226|ref|YP_002827198.1| diaminopimelate decarboxylase [Sinorhizobium fredii NGR234] gi|227342227|gb|ACP26445.1| diaminopimelate decarboxylase [Sinorhizobium fredii NGR234] Length = 422 Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 250/421 (59%), Positives = 327/421 (77%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y +G L+AE+V + +A V TPFYCYST +E++Y F+ AF +D MVCYA+K Sbjct: 1 MNHFDYRDGILYAEDVPVTDIARAVGTPFYCYSTATLERHYRVFAQAFADVDAMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL LG+G+D+VSEGELRRALAA +PAERI+FSGVGKT E+DL L++GIY Sbjct: 61 ANSNQAVLKTLGRLGAGIDVVSEGELRRALAAGIPAERIMFSGVGKTPREMDLGLEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ LNQRAV GK+A ++FR+NPD++A TH KISTGKKE+KFGI + + Sbjct: 121 CFNVESEPELEILNQRAVRAGKQAHVSFRINPDVDARTHAKISTGKKENKFGISWERARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+TLPG+K++G+DMHIGSQI +++ F AFKLLR+L LRS+GH I H+D+GGGL Sbjct: 181 VYAHAATLPGIKVTGIDMHIGSQITELQPFDDAFKLLRELVDTLRSDGHAIDHVDIGGGL 240 Query: 241 GIAYHSDHRPPS-SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP YA ++ L CKI+ EPGR +V + GILVT+VI +K +K Sbjct: 241 GIPYREDNNPPPLPDAYADIVKNQLKGLDCKIVTEPGRLIVGNAGILVTEVIYVKDGGEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYHEI + A + I AD+VGP+CETGD++AL+R++A+ Sbjct: 301 TFVIVDGAMNDLIRPTLYEAYHEIRPVKISAANAPRIKADVVGPVCETGDYLALDREMAM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+PGDL I GAYGAVQ+GTYNSRLL+PE++V G +FH+IRPR + LI+LDS+P W Sbjct: 361 PKPGDLFAIGSAGAYGAVQAGTYNSRLLVPEVLVKGDRFHVIRPRKDYDALIDLDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|146343265|ref|YP_001208313.1| diaminopimelate decarboxylase [Bradyrhizobium sp. ORS278] gi|146196071|emb|CAL80098.1| diaminopimelate decarboxylase [Bradyrhizobium sp. ORS278] Length = 446 Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 213/421 (50%), Positives = 295/421 (70%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y +G LHAE V+L +LA V TPFYCYST +E++Y F++AF G D ++CYA+K Sbjct: 26 MNHFDYRDGVLHAEAVNLAELASRVGTPFYCYSTATLERHYRVFADAFAGQDVLICYAMK 85 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++TLA LG+G D+VS GEL+RALAA +P+ +IVFSGVGKT E+ AL + I+ Sbjct: 86 ANSNQSVLRTLAKLGAGADVVSGGELKRALAAGIPSRKIVFSGVGKTEAELRAALAADIH 145 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C N+ESE EL L + AV G A I+ RVNPD++A TH KISTGK E+KFGIP+ Sbjct: 146 CLNIESEPELDLLARLAVETGHTARISIRVNPDVDAGTHAKISTGKSENKFGIPLDHARR 205 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ + G+K++GVD+HIGSQI + AF++L + Q LR++GH+I H+D GGGL Sbjct: 206 VYARAAKMKGIKVTGVDVHIGSQITDLGPMETAFRILTEFVQTLRADGHDISHVDFGGGL 265 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP + YA+++ + NL C ++ EPGR +V + GIL+ KVI +K K Sbjct: 266 GIPYHMDRAVPPEPAAYAAMVKRVSHNLGCTLMFEPGRMIVGNAGILLAKVIYVKHGEAK 325 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLY+A+H+I + D AD+VGP+CE+GD++AL+R + Sbjct: 326 NFVIIDAAMNDLIRPTLYEAHHDILPVKQAPPDAPAFVADVVGPVCESGDYLALDRALPE 385 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDLL I GAYGAVQ+ TYN+R L+PE++V G Q +IRPR+ ++LI +D+ W Sbjct: 386 PAPGDLLAIMTAGAYGAVQACTYNTRALVPEVLVKGDQAAVIRPRIEVEQLIAMDTPAPW 445 Query: 420 L 420 L Sbjct: 446 L 446 >gi|159045599|ref|YP_001534393.1| diaminopimelate decarboxylase [Dinoroseobacter shibae DFL 12] gi|157913359|gb|ABV94792.1| diaminopimelate decarboxylase [Dinoroseobacter shibae DFL 12] Length = 431 Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 210/430 (48%), Positives = 296/430 (68%), Gaps = 1/430 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+V + +A V TPFY YST + +++ F A +VC+A+K Sbjct: 1 MDHFTYIKGQLHAEDVPVSAIADAVGTPFYVYSTATLTRHFKLFDEALSWGPHLVCFAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSNQA++K LA LG+G+D+VS GE RA AA VP +RIVFSGVGKT DE+ +AL GI Sbjct: 61 SNSNQAILKLLADLGAGMDVVSGGEYARARAAGVPGDRIVFSGVGKTADEMRMALTGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ L+ A LG +API RVNPD++A TH+KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMQRLSAVAQGLGMQAPITIRVNPDVDAKTHEKIATGKSENKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+K+ G+D+HIGSQ+ ++E F A+ + +LT+ LR++GH I +D+GGGL Sbjct: 181 VYAQAARLPGIKVIGIDVHIGSQLTELEPFELAYAKVAELTRHLRADGHEITRLDLGGGL 240 Query: 241 GIAY-HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y ++ PP +DY +LI + G+L C+I +EPGR + + G+LV++VI +K+ D+ Sbjct: 241 GIPYARTNEAPPLPTDYGALIQRTVGDLGCEIEIEPGRLISGNAGLLVSEVIYVKQGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP++Y AYH+I + A DIVGP+CE+GD A +R++ Sbjct: 301 QFLILDAAMNDLIRPSMYGAYHDIVPVREAAPGTPTTPYDIVGPVCESGDTFAKSREMVP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YN+R LIPE++V+G QF +IR R +F E+I D+IPAW Sbjct: 361 LTEGDLVAFRSAGAYGAVMASEYNTRPLIPEVLVHGDQFAVIRQRPSFDEIINRDTIPAW 420 Query: 420 LQKTPKQSSE 429 L TP + + Sbjct: 421 LVDTPVPAEQ 430 >gi|86139003|ref|ZP_01057574.1| diaminopimelate decarboxylase [Roseobacter sp. MED193] gi|85824234|gb|EAQ44438.1| diaminopimelate decarboxylase [Roseobacter sp. MED193] Length = 421 Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 212/421 (50%), Positives = 293/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L+AE+V + ++A V TPFY YST + +++ F A +GMD +VCYA+K Sbjct: 1 MDHFLYRDGALYAEDVPVAEIAAAVGTPFYVYSTATLLRHFRLFDEALEGMDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VS+GE RA AA VP ++IVFSGVGKT DEI AL GI Sbjct: 61 AASNQAILKTLAQAGAGMDVVSQGEYLRAKAAGVPGDKIVFSGVGKTADEIRCALSGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ +N A+ LG+ API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMAVINAVALELGQVAPITIRVNPDVDAKTHAKIATGKSENKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+TLPG+K+ GVD HIGSQ+ ++E F KA++ + +LT+ LR++GH+I +D+GGGL Sbjct: 181 VYAHAATLPGLKVIGVDCHIGSQLTELEPFRKAYEKIAELTESLRADGHDIHRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +Y LI + G+L C+I +EPGR + + G++V+KVI +K D+ Sbjct: 241 GIPYTRSNEAPPLPVEYGQLIKETLGHLGCEIEIEPGRLIAGNAGLMVSKVIYVKSGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RP +Y+A+H+I + PA + DIVGP+CETGD A R + Sbjct: 301 EFLIVDGAMNDLIRPAMYEAHHDIVAVNEPAPGIENRPYDIVGPVCETGDTFAKQRDMPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR LIPE++V+G QF +IRPR F E+I D+IP W Sbjct: 361 LAAGDLIAFRSAGAYGAVMASEYNSRPLIPEVLVHGDQFAVIRPRPDFDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|163759920|ref|ZP_02167004.1| probable diaminopimelate dap decarboxylase protein [Hoeflea phototrophica DFL-43] gi|162282878|gb|EDQ33165.1| probable diaminopimelate dap decarboxylase protein [Hoeflea phototrophica DFL-43] Length = 422 Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 244/421 (57%), Positives = 321/421 (76%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y EG L+AE VS+ +A V TPFYCYST + ++Y F+ AF +D+MVCYA+K Sbjct: 1 MNHFEYREGVLYAEGVSVPDIAAEVGTPFYCYSTATLTRHYQVFAGAFSDIDSMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTLA LGSG+D+VSEGELRRALAA +PA RI+FSGVGKTI E+D AL + IY Sbjct: 61 ANSNQAVLKTLAKLGSGVDVVSEGELRRALAAGIPASRIMFSGVGKTIREMDAALAADIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ESE EL+ LN RA+++GK API+FR+NPD++A TH KISTGKKEDKFGI + Sbjct: 121 CFNIESEPELEVLNARALAIGKVAPISFRINPDVDAKTHAKISTGKKEDKFGISWQRARD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y +A+TLPGVK++G+DMHIGSQI +++ F A KL+ +L LRS+GH I H D+GGGL Sbjct: 181 VYRHAATLPGVKVTGIDMHIGSQITELQPFDDALKLMIELIGVLRSDGHIIDHFDIGGGL 240 Query: 241 GIAYHSDHRPPSSSD-YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 G+ Y D+ PP D Y ++ G+L CK+ILEPGR +VA+ G+LVT+V+ +K DK Sbjct: 241 GVPYRDDNTPPPDPDAYGKMVKARLGDLGCKVILEPGRLIVANAGVLVTEVVYVKDGGDK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLYDA+HE+ + A I ADIVGP+CE+GD++A +R++A Sbjct: 301 TFVIVDAAMNDLIRPTLYDAWHEVRAVRLSAASAPRIRADIVGPVCESGDYLAKDREMAA 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDLL + GAYGAVQ+GTYN+R LIPE++V FH++R R +++ELI LD IPAW Sbjct: 361 VKAGDLLAVGSAGAYGAVQAGTYNTRPLIPEVLVKDDAFHVVRKRPSYEELIALDDIPAW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|149913117|ref|ZP_01901651.1| diaminopimelate decarboxylase [Roseobacter sp. AzwK-3b] gi|149813523|gb|EDM73349.1| diaminopimelate decarboxylase [Roseobacter sp. AzwK-3b] Length = 421 Score = 329 bits (843), Expect = 6e-88, Method: Composition-based stats. Identities = 209/421 (49%), Positives = 288/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G L+AE+V + ++A V TPFYCYST + +++ F A G + ++CYA+K Sbjct: 1 MDHFLYRNGELYAEDVPVAEIAAQVGTPFYCYSTATLTRHFRLFDEALAGTEHLICYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SN A++KTLA LG+G+D+VS GE RA AA VP ERIVFSGVGKT DE+ +AL+ GI Sbjct: 61 AASNLAILKTLAELGAGMDVVSGGEYARAKAAGVPGERIVFSGVGKTRDEMRMALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ LN+ A+SLG +API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMAALNEVALSLGLRAPITVRVNPDVDAKTHAKIATGKSENKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ +PG+++ G+D+HIGSQ+ ++E F A++ + DLT+ LR++GH+I+ +D+GGGL Sbjct: 181 IYAEAAAMPGLEVVGIDVHIGSQLTELEPFRLAYEKVADLTEALRADGHDIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP DY LI G+L C+I +EPGR +V + GILV++VI +K + Sbjct: 241 GIPYTRSNEAPPLPVDYGQLIKDTVGHLGCEIEIEPGRLVVGNAGILVSEVIYLKAGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +YDAYH+I + P DIVGP+CE+GD A R + Sbjct: 301 DFLILDAAMNDLIRPAMYDAYHDIVPVREPQPGAEQAAYDIVGPVCESGDTFAKARMMPA 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YN+R L+PE++V+ QF +IR R TF E+I D+IP W Sbjct: 361 LAQGDLVAFRSAGAYGAVMASEYNTRPLVPEVLVHEHQFAVIRARPTFDEIINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|239832987|ref|ZP_04681316.1| diaminopimelate decarboxylase [Ochrobactrum intermedium LMG 3301] gi|239825254|gb|EEQ96822.1| diaminopimelate decarboxylase [Ochrobactrum intermedium LMG 3301] Length = 421 Score = 329 bits (842), Expect = 6e-88, Method: Composition-based stats. Identities = 233/421 (55%), Positives = 312/421 (74%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G +HAEN+SL ++A V TPFY YS +E+++ FS AF GM+T+V YALK Sbjct: 1 MNHFEYRNGVVHAENISLPEIAQAVGTPFYVYSRATVERHFRVFSEAFAGMETLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTLA LG+G D VSEGE+RRALAA +PA +IVFSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLKTLAKLGAGADTVSEGEIRRALAAGIPANKIVFSGVGKTPHEMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV GK A ++ R+NPD++A TH KISTGK E+KFGIP + Sbjct: 121 CFNVESEPELEILSARAVRAGKVASVSLRINPDVDAKTHAKISTGKSENKFGIPRVKARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLDVVGIDMHIGSQIIDLEPFDDAFALMAQLVKELQADGHNIRHVDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L K + EPGR +V + G+LVT+VI +K+ K Sbjct: 241 GIPYRTDNTPPPLPVAYAEIVARHIKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+H+I + P D I AD VGP+CETGD++ L+R++A Sbjct: 301 NFVIVDAAMNDLIRPTLYDAFHDIKPVTLPKDDAPRIRADFVGPVCETGDYLGLDREVAK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ + TGAYGAV S TYNSRLLIPE++V+G ++H++RPR T++EL+ LDS+P W Sbjct: 361 PAPGDLIAVCTTGAYGAVLSSTYNSRLLIPEVLVDGDRYHVVRPRRTYEELLALDSVPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|317050250|ref|YP_004111366.1| diaminopimelate decarboxylase [Desulfurispirillum indicum S5] gi|316945334|gb|ADU64810.1| diaminopimelate decarboxylase [Desulfurispirillum indicum S5] Length = 414 Score = 329 bits (842), Expect = 7e-88, Method: Composition-based stats. Identities = 179/416 (43%), Positives = 259/416 (62%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G LH E V L ++A V TP Y YS +E++ F+ AF ++ M+C+A+K Sbjct: 1 MDFFTYHNGELHCEEVPLSRIAQEVGTPVYVYSQRTLERHAQVFTQAFANLNAMICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN +++ LA G G DIVS GEL RAL A +P E+I+F+GVGK DE++ AL I+ Sbjct: 61 SNSNIHILRVLAEQGIGADIVSGGELYRALKAGIPREKILFAGVGKKADEMEYALSEDIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL L A L K A +A RVNPD++A TH ISTG KE+KFGIP+ Sbjct: 121 MFNVESMEELDLLQATAKRLNKTASVALRVNPDVDARTHPYISTGLKENKFGIPMESALE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA +L +++ G+ HIGSQ+ IE F AF ++++L ++L S I++ID+GGGL Sbjct: 181 SYRYAHSLSCIRVRGIHCHIGSQLTAIEPFVDAFVIIKNLVRELLSENIPIEYIDMGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y +PP ++ A+ I + + C++ILEPGR + + G +T+V+ K + + Sbjct: 241 GITY-DQEKPPLPTELAAAIAPHLKEVPCRLILEPGRAIAGNTGAFLTRVLFTKDNGSRK 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I+D AMND RP+LY ++H+I V + DIVGP+CE+GDF A NR + Sbjct: 300 FLIVDGAMNDLARPSLYGSFHDIRPAV--VREGNTEVVDIVGPVCESGDFFAKNRPLPPC 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGD+L + GAYG S YNSR E++V+G ++ +IR R T+++L L+ + Sbjct: 358 HPGDILSLMSAGAYGFTMSSNYNSRPRAAEVLVSGDRYRVIRQRETYEDLTRLEEL 413 >gi|15966402|ref|NP_386755.1| diaminopimelate DAP decarboxylase protein [Sinorhizobium meliloti 1021] gi|307315801|ref|ZP_07595314.1| diaminopimelate decarboxylase [Sinorhizobium meliloti BL225C] gi|307321017|ref|ZP_07600423.1| diaminopimelate decarboxylase [Sinorhizobium meliloti AK83] gi|15075673|emb|CAC47228.1| Probable diaminopimelate DAP decarboxylase [Sinorhizobium meliloti 1021] gi|306893292|gb|EFN24072.1| diaminopimelate decarboxylase [Sinorhizobium meliloti AK83] gi|306898547|gb|EFN29221.1| diaminopimelate decarboxylase [Sinorhizobium meliloti BL225C] Length = 422 Score = 329 bits (842), Expect = 7e-88, Method: Composition-based stats. Identities = 251/421 (59%), Positives = 327/421 (77%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y +G L+AE+V L ++A V TPFYCYST +E++Y FS AF +D MVCYA+K Sbjct: 1 MNHFQYRDGILYAEDVPLTEIARAVGTPFYCYSTATLERHYKVFSQAFADVDAMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL LG+GLD+VSEGELRRALAA +PA RI+FSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLKTLGRLGAGLDVVSEGELRRALAAGIPAGRIMFSGVGKTAREMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ LNQRAV G++AP++FR+NPD++A TH KISTGKKE+KFGI + Sbjct: 121 CFNVESEPELEVLNQRAVRAGRRAPVSFRINPDVDARTHAKISTGKKENKFGISWERARG 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+ LPG++++G+DMHIGSQI +++ F AFKLLR+L LRS+GH I+H+D+GGGL Sbjct: 181 VYAHAAELPGIEVTGIDMHIGSQITELQPFDDAFKLLRELVDTLRSDGHVIEHVDIGGGL 240 Query: 241 GIAYHSDHRPPS-SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP YA ++ L CKI+ EPGR +V + GILVT+V+ +K DK Sbjct: 241 GIPYREDNNPPPLPDAYADIVKNQLKGLDCKIVTEPGRLIVGNAGILVTEVVYVKDGGDK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYHEI + A I AD+VGP+CETGD++AL+R++A+ Sbjct: 301 TFVIVDGAMNDLIRPTLYEAYHEIRPVKISAASAPRIKADVVGPVCETGDYLALDREMAM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+PGDL I GAYGAVQ+GTYNSRLL+PE++V G +FH+IRPR + ELI LDS+P W Sbjct: 361 PKPGDLFAIGSAGAYGAVQAGTYNSRLLVPEVLVKGDRFHVIRPRRDYDELIGLDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|254510199|ref|ZP_05122266.1| diaminopimelate decarboxylase [Rhodobacteraceae bacterium KLH11] gi|221533910|gb|EEE36898.1| diaminopimelate decarboxylase [Rhodobacteraceae bacterium KLH11] Length = 421 Score = 329 bits (842), Expect = 7e-88, Method: Composition-based stats. Identities = 210/421 (49%), Positives = 292/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L AE+V + ++A V TPFY YST +++++ F +A DG D +VCYA+K Sbjct: 1 MDHFLYRDGALFAEDVPISEIAAAVGTPFYVYSTATLQRHFKLFDDALDGTDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VS GE RA AA VP ++IVFSGVGKT DEI AL GI Sbjct: 61 AASNQAILKTLAQAGAGMDVVSGGEYLRAKAAGVPGDKIVFSGVGKTADEIRTALTGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ +N A+ LGK API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMQVINAVALDLGKVAPITIRVNPDVDAKTHAKIATGKSENKFGIPISRASE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A++LPG+++ G+D+HIGSQ+ ++E F A+ + +LT++LRS GHNI+ +D+GGGL Sbjct: 181 VYALAASLPGLEVIGIDVHIGSQLTELEPFELAYTKVAELTERLRSEGHNIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +Y ++I + G+L C+I +EPGR + + G++V+ VI +K D+ Sbjct: 241 GIPYTRSNDAPPLPVEYGAMIQKTLGHLGCEIEIEPGRLIAGNAGLMVSSVIYVKSGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +Y+A+H+I + PA DIVGP+CETGD A R + Sbjct: 301 DFLILDGAMNDLIRPAMYEAHHDIVAVEEPAAGVEQRPYDIVGPVCETGDTFARQRNMPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ GAYGAV S YN+R LIPE++VNG QF +IR R +F E+I D+IP W Sbjct: 361 LKSGDLIAFRSAGAYGAVMSSEYNTRPLIPEVLVNGDQFAVIRERPSFDEIINRDTIPGW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|163738911|ref|ZP_02146324.1| diaminopimelate decarboxylase [Phaeobacter gallaeciensis BS107] gi|161387716|gb|EDQ12072.1| diaminopimelate decarboxylase [Phaeobacter gallaeciensis BS107] Length = 421 Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats. Identities = 209/421 (49%), Positives = 292/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L+AE+V + ++A V TPFY YST + +++ F +A GMD +VCYA+K Sbjct: 1 MDHFLYRDGALYAEDVPVAEIAATVGTPFYLYSTATLLRHFNLFDDALKGMDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VS+GE RA AA VP +RIVFSGVGKT DEI AL GI Sbjct: 61 AASNQAILKTLAQAGAGMDVVSQGEYLRAKAAGVPGDRIVFSGVGKTQDEIRTALSGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ +N A+ LG API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMDVINAVALELGVVAPITVRVNPDVDAKTHAKIATGKSENKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A++LPG+K+ G+D+HIGSQ+ ++ F A++ + +LT+QLR++GH+I +D+GGGL Sbjct: 181 VYARAASLPGLKVIGIDVHIGSQLTELAPFELAYQKVAELTEQLRADGHDIHRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +Y +++ + G+L C+I +EPGR + + GI+V+KVI +K D+ Sbjct: 241 GIPYTRSNDTPPLPVEYGAMVQRTLGHLGCEIEIEPGRLIAGNAGIMVSKVIYVKSGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RP +Y+AYH+I ++ P+ DIVGP+CETGD A +R + Sbjct: 301 DFLIIDGAMNDLIRPAMYEAYHDIVPVIEPSAGVEQRAYDIVGPVCETGDTFARHRDMPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR LIPE++VNG QF +IR R F E+I D+IP W Sbjct: 361 LEAGDLVAFRSAGAYGAVMASEYNSRPLIPEVLVNGDQFAVIRRRPDFDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|256112311|ref|ZP_05453232.1| diaminopimelate decarboxylase [Brucella melitensis bv. 3 str. Ether] gi|265993744|ref|ZP_06106301.1| diaminopimelate decarboxylase [Brucella melitensis bv. 3 str. Ether] gi|262764725|gb|EEZ10646.1| diaminopimelate decarboxylase [Brucella melitensis bv. 3 str. Ether] Length = 421 Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats. Identities = 234/421 (55%), Positives = 314/421 (74%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G LHAENVSL ++A V TPFY YS IE+++ F +AF MDT+V YALK Sbjct: 1 MNHFEYRNGVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ LA LG+G D VS+GE+RRALAA +PA RIVFSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLTALAKLGAGADTVSQGEIRRALAASIPANRIVFSGVGKTPREMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+ GK AP++ R+NPD++A TH KISTGK E+KFGIP + + Sbjct: 121 CFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ +L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L K + EPGR +V + G+LVT+VI +K+ K Sbjct: 241 GIPYRTDNTPPPPPVAYAQIVAKHIKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+H+I ++ P + I AD VGP+CETGD++ L+R++A Sbjct: 301 NFVIVDAAMNDLIRPTLYDAFHDIRPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ I TGAYGAV S TYNSRLLIPE++V+G ++H++RPR T++EL+ LDS+P W Sbjct: 361 PAPGDLIAICTTGAYGAVLSSTYNSRLLIPEVLVDGERYHVVRPRRTYEELLALDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|294851220|ref|ZP_06791893.1| diaminopimelate decarboxylase [Brucella sp. NVSL 07-0026] gi|294819809|gb|EFG36808.1| diaminopimelate decarboxylase [Brucella sp. NVSL 07-0026] Length = 421 Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats. Identities = 235/421 (55%), Positives = 314/421 (74%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G LHAENVSL ++A V TPFY YS IE+++ F +AF MDT+V YALK Sbjct: 1 MNHFEYRNGVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ LA LG+G D VS+GE+RRALAA +PA RIVFSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLTALAKLGAGADTVSQGEIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+ GK AP++ R+NPD++A TH KISTGK E+KFGIP + + Sbjct: 121 CFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ +L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L K + EPGR +V + G+LVT+VI +KK K Sbjct: 241 GIPYRTDNTPPPPPVAYAQIVAKHIKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKKGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+H+I ++ P + I AD VGP+CETGD++ L+R++A Sbjct: 301 NFVIVDAAMNDLIRPTLYDAFHDIRPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ I TGAYGAV S TYNSRLLIPE++V+G ++H++RPR T++EL+ LDS+P W Sbjct: 361 PAPGDLIAICTTGAYGAVLSSTYNSRLLIPEVLVDGERYHVVRPRRTYEELLALDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|163844005|ref|YP_001628409.1| diaminopimelate decarboxylase [Brucella suis ATCC 23445] gi|163674728|gb|ABY38839.1| diaminopimelate decarboxylase [Brucella suis ATCC 23445] Length = 421 Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats. Identities = 234/421 (55%), Positives = 314/421 (74%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G LHAENVSL ++A V TPFY YS IE+++ F +AF MDT+V YALK Sbjct: 1 MNHFEYRNGVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ LA LG+G D VS+GE+RRALAA +PA RIVFSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLTALAKLGAGADTVSQGEIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+ GK AP++ R+NPD++A TH KISTGK E+KFGIP + + Sbjct: 121 CFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ +L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L K + EPGR +V + G+LVT+VI +K+ K Sbjct: 241 GIPYRTDNTPPPPPVAYAQIVAKHIKPLGLKTVFEPGRRIVGNAGLLVTEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+H+I ++ P + I AD VGP+CETGD++ L+R++A Sbjct: 301 NFVIVDAAMNDLIRPTLYDAFHDIRPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ I TGAYGAV S TYNSRLLIPE++V+G ++H++RPR T++EL+ LDS+P W Sbjct: 361 PAPGDLIAICTTGAYGAVLSSTYNSRLLIPEVLVDGERYHVVRPRRTYEELLALDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|23502831|ref|NP_698958.1| diaminopimelate decarboxylase [Brucella suis 1330] gi|62290831|ref|YP_222624.1| LysA, diaminopimelate decarboxylase [Brucella abortus bv. 1 str. 9-941] gi|82700743|ref|YP_415317.1| diaminopimelate decarboxylase [Brucella melitensis biovar Abortus 2308] gi|148560505|ref|YP_001259800.1| diaminopimelate decarboxylase [Brucella ovis ATCC 25840] gi|161619901|ref|YP_001593788.1| diaminopimelate decarboxylase [Brucella canis ATCC 23365] gi|189025050|ref|YP_001935818.1| diaminopimelate decarboxylase [Brucella abortus S19] gi|225628182|ref|ZP_03786217.1| diaminopimelate decarboxylase [Brucella ceti str. Cudo] gi|225853419|ref|YP_002733652.1| diaminopimelate decarboxylase [Brucella melitensis ATCC 23457] gi|237816345|ref|ZP_04595338.1| diaminopimelate decarboxylase [Brucella abortus str. 2308 A] gi|254690121|ref|ZP_05153375.1| diaminopimelate decarboxylase [Brucella abortus bv. 6 str. 870] gi|254694611|ref|ZP_05156439.1| diaminopimelate decarboxylase [Brucella abortus bv. 3 str. Tulya] gi|254696236|ref|ZP_05158064.1| diaminopimelate decarboxylase [Brucella abortus bv. 2 str. 86/8/59] gi|254700621|ref|ZP_05162449.1| diaminopimelate decarboxylase [Brucella suis bv. 5 str. 513] gi|254704991|ref|ZP_05166819.1| diaminopimelate decarboxylase [Brucella suis bv. 3 str. 686] gi|254707493|ref|ZP_05169321.1| diaminopimelate decarboxylase [Brucella pinnipedialis M163/99/10] gi|254708966|ref|ZP_05170777.1| diaminopimelate decarboxylase [Brucella pinnipedialis B2/94] gi|254731154|ref|ZP_05189732.1| diaminopimelate decarboxylase [Brucella abortus bv. 4 str. 292] gi|256030493|ref|ZP_05444107.1| diaminopimelate decarboxylase [Brucella pinnipedialis M292/94/1] gi|256158479|ref|ZP_05456377.1| diaminopimelate decarboxylase [Brucella ceti M490/95/1] gi|256253898|ref|ZP_05459434.1| diaminopimelate decarboxylase [Brucella ceti B1/94] gi|256258375|ref|ZP_05463911.1| diaminopimelate decarboxylase [Brucella abortus bv. 9 str. C68] gi|256263101|ref|ZP_05465633.1| diaminopimelate decarboxylase [Brucella melitensis bv. 2 str. 63/9] gi|260169399|ref|ZP_05756210.1| diaminopimelate decarboxylase [Brucella sp. F5/99] gi|260546098|ref|ZP_05821838.1| diaminopimelate decarboxylase [Brucella abortus NCTC 8038] gi|260567535|ref|ZP_05838005.1| diaminopimelate decarboxylase [Brucella suis bv. 4 str. 40] gi|260755660|ref|ZP_05868008.1| diaminopimelate decarboxylase [Brucella abortus bv. 6 str. 870] gi|260758885|ref|ZP_05871233.1| diaminopimelate decarboxylase [Brucella abortus bv. 4 str. 292] gi|260760609|ref|ZP_05872952.1| diaminopimelate decarboxylase [Brucella abortus bv. 2 str. 86/8/59] gi|260884685|ref|ZP_05896299.1| diaminopimelate decarboxylase [Brucella abortus bv. 9 str. C68] gi|261214935|ref|ZP_05929216.1| diaminopimelate decarboxylase [Brucella abortus bv. 3 str. Tulya] gi|261221035|ref|ZP_05935316.1| diaminopimelate decarboxylase [Brucella ceti B1/94] gi|261314977|ref|ZP_05954174.1| diaminopimelate decarboxylase [Brucella pinnipedialis M163/99/10] gi|261316465|ref|ZP_05955662.1| diaminopimelate decarboxylase [Brucella pinnipedialis B2/94] gi|261751130|ref|ZP_05994839.1| diaminopimelate decarboxylase [Brucella suis bv. 5 str. 513] gi|261755692|ref|ZP_05999401.1| diaminopimelate decarboxylase [Brucella suis bv. 3 str. 686] gi|261758922|ref|ZP_06002631.1| diaminopimelate decarboxylase [Brucella sp. F5/99] gi|265987535|ref|ZP_06100092.1| diaminopimelate decarboxylase [Brucella pinnipedialis M292/94/1] gi|265996995|ref|ZP_06109552.1| diaminopimelate decarboxylase [Brucella ceti M490/95/1] gi|297247217|ref|ZP_06930935.1| diaminopimelate decarboxylase [Brucella abortus bv. 5 str. B3196] gi|23348856|gb|AAN30873.1| diaminopimelate decarboxylase [Brucella suis 1330] gi|62196963|gb|AAX75263.1| LysA, diaminopimelate decarboxylase [Brucella abortus bv. 1 str. 9-941] gi|82616844|emb|CAJ11940.1| Orn/DAP/Arg decarboxylase, family 2:ATP/GTP-binding site motif A (P-loop):Diaminopimelate decarboxylase [Brucella melitensis biovar Abortus 2308] gi|148371762|gb|ABQ61741.1| diaminopimelate decarboxylase [Brucella ovis ATCC 25840] gi|161336712|gb|ABX63017.1| diaminopimelate decarboxylase [Brucella canis ATCC 23365] gi|189020622|gb|ACD73344.1| diaminopimelate decarboxylase [Brucella abortus S19] gi|225617007|gb|EEH14054.1| diaminopimelate decarboxylase [Brucella ceti str. Cudo] gi|225641784|gb|ACO01698.1| diaminopimelate decarboxylase [Brucella melitensis ATCC 23457] gi|237788412|gb|EEP62627.1| diaminopimelate decarboxylase [Brucella abortus str. 2308 A] gi|260096205|gb|EEW80081.1| diaminopimelate decarboxylase [Brucella abortus NCTC 8038] gi|260157053|gb|EEW92133.1| diaminopimelate decarboxylase [Brucella suis bv. 4 str. 40] gi|260669203|gb|EEX56143.1| diaminopimelate decarboxylase [Brucella abortus bv. 4 str. 292] gi|260671041|gb|EEX57862.1| diaminopimelate decarboxylase [Brucella abortus bv. 2 str. 86/8/59] gi|260675768|gb|EEX62589.1| diaminopimelate decarboxylase [Brucella abortus bv. 6 str. 870] gi|260874213|gb|EEX81282.1| diaminopimelate decarboxylase [Brucella abortus bv. 9 str. C68] gi|260916542|gb|EEX83403.1| diaminopimelate decarboxylase [Brucella abortus bv. 3 str. Tulya] gi|260919619|gb|EEX86272.1| diaminopimelate decarboxylase [Brucella ceti B1/94] gi|261295688|gb|EEX99184.1| diaminopimelate decarboxylase [Brucella pinnipedialis B2/94] gi|261304003|gb|EEY07500.1| diaminopimelate decarboxylase [Brucella pinnipedialis M163/99/10] gi|261738906|gb|EEY26902.1| diaminopimelate decarboxylase [Brucella sp. F5/99] gi|261740883|gb|EEY28809.1| diaminopimelate decarboxylase [Brucella suis bv. 5 str. 513] gi|261745445|gb|EEY33371.1| diaminopimelate decarboxylase [Brucella suis bv. 3 str. 686] gi|262551463|gb|EEZ07453.1| diaminopimelate decarboxylase [Brucella ceti M490/95/1] gi|263093002|gb|EEZ17152.1| diaminopimelate decarboxylase [Brucella melitensis bv. 2 str. 63/9] gi|264659732|gb|EEZ29993.1| diaminopimelate decarboxylase [Brucella pinnipedialis M292/94/1] gi|297174386|gb|EFH33733.1| diaminopimelate decarboxylase [Brucella abortus bv. 5 str. B3196] gi|326409982|gb|ADZ67047.1| diaminopimelate decarboxylase [Brucella melitensis M28] gi|326539699|gb|ADZ87914.1| diaminopimelate decarboxylase [Brucella melitensis M5-90] Length = 421 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 234/421 (55%), Positives = 314/421 (74%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G LHAENVSL ++A V TPFY YS IE+++ F +AF MDT+V YALK Sbjct: 1 MNHFEYRNGVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ LA LG+G D VS+GE+RRALAA +PA RIVFSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLTALAKLGAGADTVSQGEIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+ GK AP++ R+NPD++A TH KISTGK E+KFGIP + + Sbjct: 121 CFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ +L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L K + EPGR +V + G+LVT+VI +K+ K Sbjct: 241 GIPYRTDNTPPPPPVAYAQIVAKHIKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+H+I ++ P + I AD VGP+CETGD++ L+R++A Sbjct: 301 NFVIVDAAMNDLIRPTLYDAFHDIRPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ I TGAYGAV S TYNSRLLIPE++V+G ++H++RPR T++EL+ LDS+P W Sbjct: 361 PAPGDLIAICTTGAYGAVLSSTYNSRLLIPEVLVDGERYHVVRPRRTYEELLALDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|222087349|ref|YP_002545886.1| diaminopimelate decarboxylase protein [Agrobacterium radiobacter K84] gi|221724797|gb|ACM27953.1| diaminopimelate decarboxylase protein [Agrobacterium radiobacter K84] Length = 423 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 249/421 (59%), Positives = 327/421 (77%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y +G L+AE+V + ++A V TPFY YST +E++Y FS AF +D MVCYA+K Sbjct: 1 MNHFQYRDGILYAEDVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFSDVDAMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL LG+G+D+VS GEL+RALAA +PA RI+FSGVGKT E+D+AL++GIY Sbjct: 61 ANSNQAVLKTLGRLGAGVDVVSVGELQRALAAGIPANRIMFSGVGKTAQEMDVALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ LNQRAV GK AP++FR+NPD++A TH KISTGKKE+KFGI + + Sbjct: 121 CFNVESEPELEVLNQRAVRAGKIAPVSFRINPDVDARTHAKISTGKKENKFGISWERART 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+ +G+DMHIGSQI +++ F AFKLLR+L + LR +GH+I H+D+GGGL Sbjct: 181 VYARAANLPGIDATGIDMHIGSQITELQPFEDAFKLLRELVETLRGDGHDIHHVDIGGGL 240 Query: 241 GIAYHSDHRPPS-SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP YA ++ L CKI+ EPGR +V + GILVT+VI +K +K Sbjct: 241 GIPYRDDNTPPPLPDAYAHIVKDQLRGLNCKIVTEPGRLIVGNAGILVTEVIYVKDGGNK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 +FVI+D AMND +RPTLY+AYHEI + A + I ADIVGP+CETGD++AL+R++A+ Sbjct: 301 SFVIVDAAMNDLIRPTLYEAYHEIRPVEITAANAPRIKADIVGPVCETGDYLALDREMAM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+PGDLL + GAYGAVQ+GTYNSRLL+PE++V GS FH+IR R T++ELI LDSIPAW Sbjct: 361 PKPGDLLAVSSGGAYGAVQAGTYNSRLLVPEVLVKGSDFHVIRARRTYEELIGLDSIPAW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|332534419|ref|ZP_08410259.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis ANT/505] gi|332036153|gb|EGI72628.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis ANT/505] Length = 417 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 195/416 (46%), Positives = 263/416 (63%), Gaps = 1/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE+VS+ +A TP Y YS E++YL F+NA ++VCYA+K Sbjct: 1 MDYFNYKNNQLFAEDVSVASIAQQYGTPCYVYSRATFERHYLAFANATKNHKSLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS+GEL R + A A ++VFSGV KT DEI AL+ GI Sbjct: 61 ANSNIAVLNILARLGSGFDIVSKGELARVIKAGGDASKVVFSGVAKTSDEIAYALKLGIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SEL+ +++ A L +API+ RVNPDI+A TH ISTG KE+KFGI I S Sbjct: 121 CFNVESASELERISEVACELNLEAPISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVS 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LPG+K+ GVD HIGSQ+ Q+ F +A L L +L++NG + H+D+GGGL Sbjct: 181 VYQQAAALPGLKVIGVDCHIGSQLTQVRPFLEALDKLMALIDELKTNGIELTHLDIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y ++ P S A + + ++I EPGR + A+ GILVT+V IK++ DK Sbjct: 241 GVPYDNEQPPHPSEYAAQVTERLANYKHLELIFEPGRAIAANAGILVTQVEFIKQNQDKF 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY A+ +I + + + DIVGP+CETGDF+ +R++A Sbjct: 301 FAIVDAGMNDMLRPALYQAWQKIIPVSVRDDETPTHNFDIVGPVCETGDFLGKDRELA-L 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL GAYG S YNSR + EIMV+G Q H+IR R T + L + + + Sbjct: 360 KQGDLLAQRSAGAYGFTMSSNYNSRPRVAEIMVDGQQHHLIRERETIESLYQGEKV 415 >gi|256370385|ref|YP_003107896.1| diaminopimelate decarboxylase [Brucella microti CCM 4915] gi|256000548|gb|ACU48947.1| diaminopimelate decarboxylase [Brucella microti CCM 4915] Length = 421 Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 234/421 (55%), Positives = 313/421 (74%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G LHAENVSL ++A V TPFY YS IE+++ F +AF MDT+V YALK Sbjct: 1 MNHFEYRNGVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ LA LG+G D VS GE+RRALAA +PA RIVFSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLTALAKLGAGADTVSHGEIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+ GK AP++ R+NPD++A TH KISTGK E+KFGIP + + Sbjct: 121 CFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ +L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L K + EPGR +V + G+LVT+VI +K+ K Sbjct: 241 GIPYRTDNTPPPPPVAYAQIVAKHIKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+H+I ++ P + I AD VGP+CETGD++ L+R++A Sbjct: 301 NFVIVDAAMNDLIRPTLYDAFHDIRPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ I TGAYGAV S TYNSRLLIPE++V+G ++H++RPR T++EL+ LDS+P W Sbjct: 361 PAPGDLIAICTTGAYGAVLSSTYNSRLLIPEVLVDGERYHVVRPRRTYEELLALDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|306843420|ref|ZP_07476021.1| diaminopimelate decarboxylase [Brucella sp. BO1] gi|306276111|gb|EFM57811.1| diaminopimelate decarboxylase [Brucella sp. BO1] Length = 421 Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 235/421 (55%), Positives = 314/421 (74%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G LHAENVSL ++A V TPFY YS IE+++ F +AF MDT+V YALK Sbjct: 1 MNHFEYRNGVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ LA LG+G D VSEGE+RRALAA +PA RIVFSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLTALAKLGAGADTVSEGEIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+ GK AP++ R+NPD++A TH KISTGK E+KFGIP + + Sbjct: 121 CFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ +L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L K + EPGR +V + G+LVT+VI +K+ K Sbjct: 241 GIPYRTDNTPPPPPVAYAEIVAKHIKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+H+I ++ P + I AD VGP+CETGD++ L+R++A Sbjct: 301 NFVIVDAAMNDLIRPTLYDAFHDIRPVIVPNDNAPRIRADFVGPVCETGDYLGLDREVAK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ I TGAYGAV S TYNSRLLIPE++V+G ++H++RPR T++EL+ LDS+P W Sbjct: 361 PAPGDLIAICTTGAYGAVLSSTYNSRLLIPEVLVDGERYHVVRPRRTYEELLALDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|254461301|ref|ZP_05074717.1| diaminopimelate decarboxylase [Rhodobacterales bacterium HTCC2083] gi|206677890|gb|EDZ42377.1| diaminopimelate decarboxylase [Rhodobacteraceae bacterium HTCC2083] Length = 433 Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 212/421 (50%), Positives = 296/421 (70%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+LHAE+V L ++A V TPFY YST +E+++ F +A +G + +VCYA+K Sbjct: 13 MDHFLYRDGALHAEDVPLSEIAASVGTPFYVYSTATLERHFKLFDDALEGTEHLVCYAMK 72 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA LG+G+D+VS GE RA AA VP ERIVFSG+GKT E+ AL GI Sbjct: 73 AASNQAILKTLAALGAGMDVVSGGEYARAKAAGVPGERIVFSGIGKTRAEVHQALTGGIR 132 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ +++ A +L API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 133 QFNVESEPEMQVISEIATALDVIAPITIRVNPDVDAKTHAKIATGKSENKFGIPISRARE 192 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A++LPG+K+ G+D+HIGSQ+ + F A+ + +LT+QLR++GH I +D+GGGL Sbjct: 193 VYALAASLPGLKVIGIDVHIGSQLIDLAPFEAAYNKVAELTEQLRADGHEISRLDLGGGL 252 Query: 241 GIAY-HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y S+ PPS +DY +LI + G+L C+I +EPGR + + G+LV++VI +K D+ Sbjct: 253 GIPYARSNEAPPSPTDYGALIKKCVGHLGCEIEIEPGRLIAGNAGLLVSEVIYVKSGEDR 312 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RP +YDA+H+I +V L DIVGP+CE+GD A R++ Sbjct: 313 EFLIIDGAMNDLIRPAMYDAHHDIVPVVESEVGVLPTPYDIVGPVCESGDTFAKGRQMPP 372 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + G+L+ GAYGAV + YN+R LIPE++V G QF +IRPR TF E+I D+IP W Sbjct: 373 LKAGNLVAFRSAGAYGAVMASEYNTRPLIPEVLVKGDQFAVIRPRPTFDEMINRDTIPEW 432 Query: 420 L 420 L Sbjct: 433 L 433 >gi|87121333|ref|ZP_01077223.1| diaminopimelate decarboxylase [Marinomonas sp. MED121] gi|86163490|gb|EAQ64765.1| diaminopimelate decarboxylase [Marinomonas sp. MED121] Length = 418 Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 183/420 (43%), Positives = 258/420 (61%), Gaps = 4/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +L AE VS+ +A TP Y YS +E++Y +++AF +++CYA+K Sbjct: 1 MDFFNYKDQALMAEGVSIASIAQQHGTPCYVYSRETLERHYKAYADAFASHPSLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SN A++ LA +G+G DIVS GEL R L A A +++FSG+GK E++ AL+ GI+ Sbjct: 61 ACSNIAILNVLAKMGAGFDIVSVGELERVLRAGGDASKVMFSGLGKQAHEMERALEVGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ESE EL LN+ A LGKKAP++ RVNPD++A TH ISTG KE+KFGI I+ Sbjct: 121 CFNIESEFELYRLNEVAEKLGKKAPVSLRVNPDVDAKTHPYISTGLKENKFGIDINDAVR 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A LP + + GVD HIGSQ+ ++ F AF L L +L G I+H+D+GGGL Sbjct: 181 IYTIAHELPYLDVMGVDCHIGSQLTELTPFIDAFDRLLKLIDELALVGIEIKHVDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP +DYA+L+ N + EPGR + A+ GILVT+V +K S K Sbjct: 241 GVRYRDE-VPPVPADYAALVLPKVENRAFSLAFEPGRSIAANAGILVTQVEFLKCSEHKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIV-NPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RP+LY A+ +I + D+VGP+CETGDF+ +R++ Sbjct: 300 FAIIDGAMNDLIRPSLYSAWMDIVPVKLKSQATGNKKLYDLVGPVCETGDFLGKDREL-D 358 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 GDLL + GAYG S YNSR E+MV+G + H+IR R T + + + +P Sbjct: 359 LEAGDLLAVRSAGAYGFTMSSNYNSRNRAAEVMVDGDKVHLIRARETIEHQLAGEQILPE 418 >gi|254464493|ref|ZP_05077904.1| diaminopimelate decarboxylase [Rhodobacterales bacterium Y4I] gi|206685401|gb|EDZ45883.1| diaminopimelate decarboxylase [Rhodobacterales bacterium Y4I] Length = 421 Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 204/421 (48%), Positives = 287/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L AE+V L ++A V TPFY YST + +++ F A +G D +VC+A+K Sbjct: 1 MDHFLYRDGALFAEDVPLSEIAAAVGTPFYVYSTATLLRHFRLFDEALEGTDHLVCFAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VS+GE RA AA VP +RIVFSGVGKT +EI +AL GI Sbjct: 61 AASNQAILKTLAQAGAGMDVVSQGEYLRARAAGVPGDRIVFSGVGKTAEEIRVALTGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ ++ A LG KAPI RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMEVISAVAEELGAKAPITIRVNPDVDAKTHAKIATGKSENKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+++ G+D+HIGSQ+ +E F A++ + +LT+ LR++GH+I+ +D+GGGL Sbjct: 181 VYARAAALPGLEVVGIDVHIGSQLTDLEPFRLAYQKVAELTETLRADGHDIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +Y +++ + G+L C+I +EPGR + + G LV+KVI +K + Sbjct: 241 GIPYERSNSAPPLPVEYGAMVKETLGHLGCEIEIEPGRLIAGNAGQLVSKVIYVKSGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVILD AMND +RP +Y+A+H+I + P DIVGP+CETGD A R + Sbjct: 301 DFVILDAAMNDLIRPAMYEAHHDIIPVQEPEAGTESRPYDIVGPVCETGDTFAKQRDLPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR LIPE++V+G QF +IR R ++E+I D+IP W Sbjct: 361 LAAGDLVSFRSAGAYGAVMASEYNSRPLIPEVLVHGDQFAVIRRRPDYEEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|88861274|ref|ZP_01135906.1| putative diaminopimelate decarboxylase [Pseudoalteromonas tunicata D2] gi|88816755|gb|EAR26578.1| putative diaminopimelate decarboxylase [Pseudoalteromonas tunicata D2] Length = 416 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 192/419 (45%), Positives = 271/419 (64%), Gaps = 4/419 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + L AE VS++ +A TP Y YS +E++Y F++A G +VCYA+K Sbjct: 1 MDHFNYRDNQLFAEGVSVQDIATQFGTPCYVYSRATLERHYHAFTDAAAGQHHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS+GEL R +AA ++VFSGV KT EI AL+ GI Sbjct: 61 ANSNLAVLNVLARLGSGFDIVSQGELARVVAAGGDPRKVVFSGVAKTAHEIRYALELGIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL+ ++ A LG+ API+ RVNPDI+A TH ISTG KE+KFGI IH+ S Sbjct: 121 CFNVESEAELERISDVATELGQTAPISIRVNPDIDAKTHPYISTGLKENKFGIEIHRAVS 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y +A+TLPG+ I G+D HIGSQ+ ++E F A + + +QL++ +I+H+DVGGGL Sbjct: 181 VYQHAATLPGISIEGIDFHIGSQLTEVEPFLAALDKVLAIIKQLKTLNIHIKHLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+AY ++ P SS + L+ + +++ EPGR + A+ GIL+T+V +K++ K Sbjct: 241 GVAYLAEEPPHPSSYVSQLVERLSEFSDLELVFEPGRAIAANAGILITQVEFLKQNQGKN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP+LY A+ I + +G DIVGP+CETGDF+ +R+++ Sbjct: 301 FAIVDAGMNDLLRPSLYQAWQNIIAVSPRSGTPS--SYDIVGPVCETGDFLGKDRELS-L 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + GAYG S YNSR + EIMV+G+ H IR R T +L + + +P Sbjct: 358 QQGDLLAVRSAGAYGFSMSSNYNSRPRVAEIMVDGATAHEIRKRETIADLYQGENKLPN 416 >gi|256059955|ref|ZP_05450139.1| diaminopimelate decarboxylase [Brucella neotomae 5K33] gi|261323926|ref|ZP_05963123.1| diaminopimelate decarboxylase [Brucella neotomae 5K33] gi|261299906|gb|EEY03403.1| diaminopimelate decarboxylase [Brucella neotomae 5K33] Length = 421 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 233/421 (55%), Positives = 313/421 (74%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G LHAENVSL ++A V TPFY YS IE+++ F +AF MDT+V YALK Sbjct: 1 MNHFEYRNGVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ LA LG+G D VS+GE+RRALAA +PA RIVFSG GKT E+D AL++GIY Sbjct: 61 ANSNQAVLTALAKLGAGADTVSQGEIRRALAAGIPANRIVFSGAGKTPREMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+ GK AP++ R+NPD++A TH KISTGK E+KFGIP + + Sbjct: 121 CFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ +L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L K + EPGR +V + G+LVT+VI +K+ K Sbjct: 241 GIPYRTDNTPPPPPVAYAQIVAKHIKPLSLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+H+I ++ P + I AD VGP+CETGD++ L+R++A Sbjct: 301 NFVIVDAAMNDLIRPTLYDAFHDIRPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ I TGAYGAV S TYNSRLLIPE++V+G ++H++RPR T++EL+ LDS+P W Sbjct: 361 PAPGDLIAICTTGAYGAVLSSTYNSRLLIPEVLVDGERYHVVRPRRTYEELLALDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|306842881|ref|ZP_07475518.1| diaminopimelate decarboxylase [Brucella sp. BO2] gi|306286968|gb|EFM58485.1| diaminopimelate decarboxylase [Brucella sp. BO2] Length = 421 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 234/421 (55%), Positives = 314/421 (74%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G LHAENVSL ++A V TPFY YS IE+++ F +AF MDT+V YALK Sbjct: 1 MNHFEYRNGVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ LA LG+G D VS+GE+RRALAA +PA RIVFSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLTALAKLGAGADTVSQGEIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+ GK AP++ R+NPD++A TH KISTGK E+KFGIP + + Sbjct: 121 CFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ +L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L K + EPGR +V + G+LVT+VI +K+ K Sbjct: 241 GIPYRTDNTPPPPPVAYAEIVAKHIKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+H+I ++ P + I AD VGP+CETGD++ L+R++A Sbjct: 301 NFVIVDAAMNDLIRPTLYDAFHDIRPVIVPNDNAPRIRADFVGPVCETGDYLGLDREVAK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ I TGAYGAV S TYNSRLLIPE++V+G ++H++RPR T++EL+ LDS+P W Sbjct: 361 PAPGDLIAICTTGAYGAVLSSTYNSRLLIPEVLVDGERYHVVRPRRTYEELLALDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|84500205|ref|ZP_00998471.1| diaminopimelate decarboxylase [Oceanicola batsensis HTCC2597] gi|84392139|gb|EAQ04407.1| diaminopimelate decarboxylase [Oceanicola batsensis HTCC2597] Length = 421 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 203/421 (48%), Positives = 286/421 (67%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L+AE+V + ++A V TPFY YST + +++ F +A G+ +VCYA+K Sbjct: 1 MDHFLYRDGALYAEDVPVAEIAAEVGTPFYLYSTATLTRHFQLFDDALSGLPHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA+++TLA LG+G+D+VS GE RA AA VP ERIVFSGVGKT E+ AL GI Sbjct: 61 AASNQAILRTLADLGAGMDVVSGGEYARARAAGVPGERIVFSGVGKTRVEMREALAGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN+ESE EL+ LN+ A+S+G AP+ RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNIESEPELEALNEVALSMGVVAPVTVRVNPDVDARTHAKIATGKSENKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA + LPG++ G+D+HIGSQ+ +E + +AF+ + DLT LR++GH+I+ +D+GGGL Sbjct: 181 VYARIAALPGLEAIGIDVHIGSQLTDLEPYRQAFEKVGDLTDALRADGHDIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP DY LI + G+ C+I +EPGR + + GI+V++VI +K + Sbjct: 241 GIPYTRGNEPPPLPMDYGKLIAETLGDKGCEIEIEPGRLVAGNAGIMVSRVIYVKSGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +Y+A+H+I +V + DIVGP+CE+GD A R + Sbjct: 301 DFLILDGAMNDLIRPAMYEAHHDIVPVVEAEAGIEYRPYDIVGPVCESGDTFARQRMMPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV S YN+R LIPE++VNG QF +IRPR +F E+I D++P W Sbjct: 361 LEAGDLVAFRSAGAYGAVMSSEYNTRPLIPEVLVNGHQFAVIRPRPSFDEIINRDTLPPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|302035867|ref|YP_003796189.1| diaminopimelate decarboxylase [Candidatus Nitrospira defluvii] gi|300603931|emb|CBK40263.1| Diaminopimelate decarboxylase [Candidatus Nitrospira defluvii] Length = 420 Score = 327 bits (837), Expect = 3e-87, Method: Composition-based stats. Identities = 178/420 (42%), Positives = 266/420 (63%), Gaps = 1/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y EG L+ E+V L ++A V TP Y YS + +++ + +AF + +V +A+K Sbjct: 1 MNDFQYREGELYCEDVPLSRIAKEVGTPCYVYSHHTLVRHFRVYDSAFQNIPHIVAFAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV++ +A GSG+DIVS GEL RAL A VP +IVF+GVGK +EI AL++ I Sbjct: 61 ANSNLAVLRMMAKEGSGVDIVSGGELFRALKAGVPPGKIVFAGVGKKPEEIRDALKADIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES +EL+ +N A S+G KA +A R+NPDI+ TH ISTG K+ KFGI + Sbjct: 121 MFNVESSAELQAINDVAASMGVKARVALRINPDIDPKTHPYISTGLKKSKFGIAADRAIE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + A+ +++ G+ HIGSQ+ Q+ F ++ K + + Q L G I+++++GGGL Sbjct: 181 EFKAAAAFSHIEVVGLHAHIGSQLTQVAPFVESLKKVLTMVQTLAEQGIPIRYLNIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + P D A+ I +L+C +I+EPGR +V + G+L+TKV+ K K Sbjct: 241 GITYSDETP-PEPKDLAAAIFPLVRDLKCVLIMEPGRVIVGNAGVLLTKVLYTKDGETKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I+D AMND +RP+LYDA+H+I + D+VGP+CE+GDF+A +R + Sbjct: 300 FLIVDAAMNDLIRPSLYDAHHDIKPVYENVARGAKETVDVVGPVCESGDFLAKDRAMPEM 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 GDL+ + GAYG V S YNSR +PE++V+ Q H+IR R ++ +L+ + IPA+L Sbjct: 360 NAGDLMAVMSAGAYGFVMSSNYNSRPRVPEVLVHEGQIHVIRARESYDDLVHGEQIPAFL 419 >gi|294678687|ref|YP_003579302.1| diaminopimelate decarboxylase [Rhodobacter capsulatus SB 1003] gi|294477507|gb|ADE86895.1| diaminopimelate decarboxylase [Rhodobacter capsulatus SB 1003] Length = 422 Score = 327 bits (837), Expect = 3e-87, Method: Composition-based stats. Identities = 206/422 (48%), Positives = 288/422 (68%), Gaps = 2/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G LHAE+V+L ++A V TPFY YS + +++ F A G D +VC+A+K Sbjct: 1 MDHFLYRNGVLHAEDVALTEIAAAVGTPFYVYSAATLTRHFQLFDAALAGTDHLVCFAIK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+K L LG+G+D+VS GE RRA AA VP +RIVFSGVGKT DEI LAL GI Sbjct: 61 SNSNLAVLKLLGDLGAGMDVVSGGEYRRAKAAGVPGDRIVFSGVGKTRDEIRLALTGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE EL+ +++ A +LG APIA RVNPD++A TH+KI+TGK E+KFGIPI + + Sbjct: 121 QFNVESEPELRAISEIATALGVTAPIALRVNPDVDAKTHEKIATGKSENKFGIPIAKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG-- 238 +YA A+ LPG+++ GVD+HIGSQ+ + F AF +R+LT LR +GH I+ +D+GG Sbjct: 181 VYAEAAKLPGIEVIGVDVHIGSQLTDLAPFEAAFTKVRELTLALREDGHKIRRLDLGGGL 240 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 G+ S+ PP +DY ++I + G+L C+I +EPGR + + G++VT VI +K+ Sbjct: 241 GIPYHQRSNEAPPLPTDYGAMITRVLGDLGCEIEIEPGRLISGNAGLMVTSVIYLKEGEG 300 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + F+I+D AMND +RP++Y A+H+I ++ PA D+VGP+CETGD R++ Sbjct: 301 RNFLIVDAAMNDLVRPSMYGAHHDIVPVIEPAPGLAPQPFDVVGPVCETGDTFTKGRELP 360 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 GDL+ GAYGAV + YNSR LIPE++V+G F +IR R +F+E++ DSIP Sbjct: 361 PMAEGDLVAFRSAGAYGAVMASEYNSRPLIPEVLVSGDHFAVIRQRPSFEEMLARDSIPE 420 Query: 419 WL 420 WL Sbjct: 421 WL 422 >gi|300021574|ref|YP_003754185.1| diaminopimelate decarboxylase [Hyphomicrobium denitrificans ATCC 51888] gi|299523395|gb|ADJ21864.1| diaminopimelate decarboxylase [Hyphomicrobium denitrificans ATCC 51888] Length = 423 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 221/421 (52%), Positives = 299/421 (71%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G LHAE+VSL ++A V TPFY YST +E++Y + AF ++C+A+K Sbjct: 1 MHHFHYKNGILHAEDVSLARIADEVGTPFYVYSTATLERHYKVLAEAFRDQKALICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ T+A LG+G+D+VSEGELRRA AA VPA +I+F+GVGKT E+ AL+ GI Sbjct: 61 ANSNQAVLATMARLGAGMDVVSEGELRRARAAGVPASKIIFAGVGKTRGEMAYALEEGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE EL L++ A +LGK A IA RVNPD++A TH KISTGK E+KFG+P Sbjct: 121 GFNVESEPELLALSEVATALGKTASIAIRVNPDVDAKTHAKISTGKAENKFGVPFEDARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA A+TLPG+KISG+ MHIGSQI + F AF LL DL + L ++G ++H+D+GGGL Sbjct: 181 LYARAATLPGLKISGIHMHIGSQITDLAPFRDAFALLHDLARDLIADGIRLEHLDIGGGL 240 Query: 241 GIAYHS-DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 G+ Y + PP+ +YA+++ G+L KI+LEPGR +V + G+LVT+V +K+ DK Sbjct: 241 GVPYRGANDIPPTPDEYAAVVKAALGDLGLKIVLEPGRMIVGNAGLLVTRVTYVKEGEDK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TF I+D AMND +RPTLY+AYHEI + D + DIVGP+CETGDF+A +R + Sbjct: 301 TFTIVDAAMNDLIRPTLYEAYHEIWPVAEQRNDMAPVQQDIVGPVCETGDFLAEDRALPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDLL + GAYGAV S TYN+RLL+PE++V+G ++ ++RPR ++ +LI D +P W Sbjct: 361 SEPGDLLAVMTAGAYGAVMSSTYNTRLLVPEVLVSGDRYAVVRPRPSYDDLIGADKLPPW 420 Query: 420 L 420 + Sbjct: 421 I 421 >gi|39937799|ref|NP_950075.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris CGA009] gi|39651659|emb|CAE30181.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris CGA009] Length = 421 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 215/421 (51%), Positives = 289/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE VSL +A V TPFYCYS+ +E++Y F+ AF G+D +VCYA+K Sbjct: 1 MRHFDYRDGVLHAEGVSLASIAQDVGTPFYCYSSATLERHYRVFTEAFAGLDALVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++TLA LG+G D+VS GEL+RALAA +P +IVFSGVGKT E+ AL I Sbjct: 61 ANSNQSVLRTLAKLGAGADVVSGGELQRALAAGIPPSKIVFSGVGKTEAELRAALDHDIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVESE EL+ L++ AV G+ A I+ RVNPD+++ TH KISTGK E+KFGIPI Sbjct: 121 CLNVESEPELEQLSRIAVETGRTARISLRVNPDVDSGTHAKISTGKSENKFGIPIRHARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG++++GVD+HIGSQI + AF+ + + LR +GH + H+D GGGL Sbjct: 181 VYARAAKLPGIQVTGVDVHIGSQIIDLAPMEAAFRKVAEFIHVLRGDGHTVNHVDFGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 Y PP YA ++ + NL C ++ EPGR +V + GILV KVI +K K Sbjct: 241 GIPYYEDRDAPPEPFAYAEMVKRVTHNLGCTLLFEPGRMIVGNAGILVAKVIYVKHGDGK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYHEI + PA + AD+VGP+CETGD++AL+RK+ Sbjct: 301 TFVIIDAAMNDLIRPTLYEAYHEILPVAAPAPGVATMVADVVGPVCETGDYLALDRKLPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ I GAYGAVQ+ TYN+R L+PE++V Q ++RPR+ ++LI +D W Sbjct: 361 LKAGDLIAIMTAGAYGAVQACTYNTRALVPEVLVKDDQVAVVRPRIEVEQLIAMDKPAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|315125206|ref|YP_004067209.1| diaminopimelate decarboxylase [Pseudoalteromonas sp. SM9913] gi|315013719|gb|ADT67057.1| diaminopimelate decarboxylase [Pseudoalteromonas sp. SM9913] Length = 417 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 193/416 (46%), Positives = 262/416 (62%), Gaps = 1/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE+VS+ +A TP Y YS E++YL F+NA ++VCYA+K Sbjct: 1 MDFFNYKNNQLFAEDVSVATIAQHYGTPCYVYSRATFERHYLAFANAAQDHKSLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LG+G DIVS+GEL R + A A ++VFSGV KT DEI AL+ GI Sbjct: 61 ANSNIAVLNILARLGAGFDIVSKGELARVIKAGGAANKVVFSGVAKTADEIAYALELGIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SEL+ +++ A L API+ RVNPDI+A TH ISTG KE+KFGI I S Sbjct: 121 CFNVESISELERISEVACELNLDAPISIRVNPDIDAKTHPYISTGLKENKFGIGIETALS 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y +A++LPG+ I GVD HIGSQ+ Q + F +A L L +L++ G + H+D+GGGL Sbjct: 181 VYQHAASLPGLNIVGVDCHIGSQLTQTKPFLEALDKLLALIDELKNAGIELSHLDIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P S A + + ++I EPGR + A+ GILVT+V IK++ DK Sbjct: 241 GVTYNDEQPPHPSEYAAQVTQRLTNYRHLELIFEPGRAIAANAGILVTQVEFIKQNQDKY 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP+LY A+ +I + + + D+VGP+CETGDF+ +R +A Sbjct: 301 FAIVDAGMNDMLRPSLYQAWQKIIPVSVRDDETPTHNYDVVGPVCETGDFLGKDRPLA-L 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL GAYG S YNSR + EIMV+G Q H+IR R T + L + + I Sbjct: 360 KQGDLLVQRSAGAYGFTMSSNYNSRPRVAEIMVDGEQHHLIRERETIESLYQGEKI 415 >gi|260466687|ref|ZP_05812874.1| diaminopimelate decarboxylase [Mesorhizobium opportunistum WSM2075] gi|259029550|gb|EEW30839.1| diaminopimelate decarboxylase [Mesorhizobium opportunistum WSM2075] Length = 422 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 234/421 (55%), Positives = 319/421 (75%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y +G LHAE+V++ +A V TPFYCYST + ++Y F+ AF G+D +VCYA+K Sbjct: 1 MNHFDYRDGVLHAEDVAIPDIAAQVGTPFYCYSTATLTRHYRVFAQAFAGLDALVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++TLA LG+G D+VSEGELRRALAA +PA +I+FSGVGKT EID AL +GI Sbjct: 61 ANSNQAVLRTLARLGAGADVVSEGELRRALAAGIPAGKILFSGVGKTAREIDFALTAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+LGK API+ R+NPD++A THKKISTGK E+KFGIP + Sbjct: 121 CFNVESEPELELLSSRAVALGKVAPISLRINPDVDARTHKKISTGKAENKFGIPWQRARQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+K++G+D HIGSQI +++ F AF LL DL LR++GH I+HIDVGGGL Sbjct: 181 VYARAAELPGIKVTGIDTHIGSQITELQPFDDAFALLVDLVGALRADGHAIEHIDVGGGL 240 Query: 241 GIAYH-SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y ++ PP YA ++ +Y L K++ EPGR +V + GILV++VI +K+ K Sbjct: 241 GIPYRVDNNPPPLPDAYAQIVRKYVTKLGLKVMFEPGRLIVGNAGILVSEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+++D AMND +RPTLYDA+H++ +V P D + D+VGP+CETGD+I L+R + Sbjct: 301 NFLVVDAAMNDLIRPTLYDAFHDVRPVVQPPADTPRMMVDVVGPVCETGDYIGLDRDLPR 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ + GAYGAVQ+GTYN+RLL+PE++V+G +FH++RPR+T+ +LI LDS+P W Sbjct: 361 LKAGDLVAVSTAGAYGAVQAGTYNTRLLVPEVLVDGDRFHVVRPRLTYDDLIGLDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|85705851|ref|ZP_01036947.1| diaminopimelate decarboxylase [Roseovarius sp. 217] gi|85669439|gb|EAQ24304.1| diaminopimelate decarboxylase [Roseovarius sp. 217] Length = 421 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 213/421 (50%), Positives = 288/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G L AE+V L ++A V TPFYCYST +E+++ F A GMD +VCYA+K Sbjct: 1 MDHFLYHNGVLQAEDVPLSEIAEAVGTPFYCYSTATLERHFRLFDEALTGMDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA LG+G+D+VS GE RA AA VP ERIVFSGVGKT +E+ LAL GI Sbjct: 61 AASNQAILKTLARLGAGMDVVSGGEYARAKAAGVPGERIVFSGVGKTREEMRLALMGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ L+ AV LG +API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMGVLSAVAVELGLRAPITIRVNPDVDAKTHAKIATGKSENKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+++ G+D+HIGSQ+ + F A++ + +LTQ LR +GH+I+ +D+GGGL Sbjct: 181 VYAQAAALPGLEVIGIDVHIGSQLTDLAPFRLAYEKVAELTQVLREDGHDIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP ++Y +LI + G+L C+I +EPGR + + GILV++VI +K + Sbjct: 241 GIPYTRSNEAPPLPTEYGALIREVLGHLGCEIEIEPGRLIAGNAGILVSRVIYLKSGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +YDA+H+I +V PA D+VGP+CE+GD A R + Sbjct: 301 DFLILDAAMNDLIRPAMYDAHHDIVPLVEPAPGVEQQPYDVVGPVCESGDTFAKGRMLPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV S YN+R L+PE++V+G F +IR R TF E+I D+IP W Sbjct: 361 LAEGDLVAFRSAGAYGAVMSSEYNTRPLVPEVLVHGRDFAVIRGRPTFDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|192293581|ref|YP_001994186.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris TIE-1] gi|192287330|gb|ACF03711.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris TIE-1] Length = 421 Score = 326 bits (836), Expect = 4e-87, Method: Composition-based stats. Identities = 215/421 (51%), Positives = 289/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE VSL +A V TPFYCYS+ +E++Y F+ AF G+D +VCYA+K Sbjct: 1 MRHFDYRDGVLHAEGVSLASIAQDVGTPFYCYSSATLERHYRVFTEAFAGLDALVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++TLA LG+G D+VS GEL+RALAA +P +IVFSGVGKT E+ AL I Sbjct: 61 ANSNQSVLRTLAKLGAGADVVSGGELQRALAAGIPPSKIVFSGVGKTEAELRAALAHDIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVESE EL+ L++ AV G+ A I+ RVNPD+++ TH KISTGK E+KFGIPI Sbjct: 121 CLNVESEPELEQLSRIAVETGRTARISLRVNPDVDSGTHAKISTGKSENKFGIPIRHARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG++++GVD+HIGSQI + AF+ + + LR +GH + H+D GGGL Sbjct: 181 VYARAAKLPGIQVTGVDVHIGSQIVDLAPMEAAFRKVAEFIHVLRGDGHTVSHVDFGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 Y PP YA ++ + NL C ++ EPGR +V + GILV KVI +K K Sbjct: 241 GIPYYEDRDAPPEPFAYAEMVKRVTHNLGCTLLFEPGRMIVGNAGILVAKVIYVKHGDGK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYHEI + PA + AD+VGP+CETGD++AL+RK+ Sbjct: 301 TFVIIDAAMNDLIRPTLYEAYHEIIAVQQPAPGVATMVADVVGPVCETGDYLALDRKLPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ I GAYGAVQ+ TYN+R L+PE++V Q ++RPR+ ++LI +D W Sbjct: 361 LKAGDLIAIMTAGAYGAVQACTYNTRALVPEVLVKDDQVAVVRPRIEVEQLIAMDKPAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|307943498|ref|ZP_07658842.1| diaminopimelate decarboxylase [Roseibium sp. TrichSKD4] gi|307773128|gb|EFO32345.1| diaminopimelate decarboxylase [Roseibium sp. TrichSKD4] Length = 424 Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats. Identities = 227/424 (53%), Positives = 305/424 (71%), Gaps = 1/424 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y G+L AE+VS+E +A V TPFYCYST + ++Y FS+AF G+DT+VCYA+K Sbjct: 1 MHHFQYKNGTLFAEDVSVEAIAEEVGTPFYCYSTATLTRHYEVFSSAFVGIDTLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++TL+ LG+G+D+VSEGELRRA AA VPA+RI+FSGVGKT E AL I Sbjct: 61 ANSNQAVLRTLSDLGAGMDVVSEGELRRARAAGVPADRILFSGVGKTEAEQAYALDEDIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL L++ A +GK A ++ R+NPD++A TH KISTGK E+KFGI + Sbjct: 121 CFNVESEPELDQLSRVASQIGKTARVSLRINPDVDAKTHAKISTGKAENKFGISWRRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+ LPG+++SG+DMHIGSQI +++ F AF L +L LRS+GH I HID+GGGL Sbjct: 181 VYAHAAKLPGIQVSGIDMHIGSQITELQPFDDAFGRLGELIADLRSDGHAIDHIDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L CKI+ EPGR + + GILV+KVI +K+ DK Sbjct: 241 GIPYVADNDPPPHPDAYAQVVKKHVDKLDCKIVFEPGRLIAGNAGILVSKVIYLKEGDDK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D MND +RPTLYDAYHE+ + PA D + AD+VGP+CETGD++A R++ Sbjct: 301 HFLIVDAGMNDLIRPTLYDAYHEVRPVREPADDTPRMTADVVGPVCETGDYLAQLRELPR 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ + GAYGAVQSGTYNSR LIPE++VN +F +IRPR + E+I +D IP W Sbjct: 361 LQSGDLIAVYSAGAYGAVQSGTYNSRPLIPEVLVNKDEFAVIRPRPSLDEMIGIDRIPDW 420 Query: 420 LQKT 423 L ++ Sbjct: 421 LTRS 424 >gi|30249905|ref|NP_841975.1| Orn/DAP/Arg decarboxylase family protein [Nitrosomonas europaea ATCC 19718] gi|30180942|emb|CAD85868.1| Orn/DAP/Arg decarboxylases family 2 [Nitrosomonas europaea ATCC 19718] Length = 417 Score = 326 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 191/416 (45%), Positives = 265/416 (63%), Gaps = 4/416 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 S+F+Y + L E+V L ++A TP Y YS+ AI Y F +AF D ++CYA+KA Sbjct: 5 SSFEYRDSQLFVESVPLAEIAAKFGTPCYVYSSAAIRTTYQIFDHAFGQRDHLICYAVKA 64 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN A++ LA LGSG DIVS GEL+R L A ++ VFSGVGKT +EI AL + I C Sbjct: 65 NSNLAILNLLARLGSGFDIVSGGELQRVLKAGGDPQKTVFSGVGKTPEEIRAALAANILC 124 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVESE EL LN+ A +GK AP++ RVNPD++ANTH ISTG KE+KFGIP + + Sbjct: 125 FNVESEMELMVLNEIAGQMGKIAPVSLRVNPDVDANTHPYISTGMKENKFGIPAAEAGRI 184 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y+ A LP +++SG+D HIGSQ+ +I F +A + DL +L++ G I+H+D+GGGLG Sbjct: 185 YSLAHQLPHIQVSGLDCHIGSQLTEIAPFIEAADKMLDLLARLQTMGVTIKHLDLGGGLG 244 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 I Y PPS Y + N ++++EPGR +V + G+L+T+V +K ++ + F Sbjct: 245 IRY-DRESPPSIEAYIKALCTIAENHPQQLLIEPGRSMVGNAGLLLTRVHYLKHTSHRNF 303 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 I+D AMND +RP LY AYH I + G+ IVGP+CETGDF+ +R +AL + Sbjct: 304 AIVDAAMNDMLRPALYQAYHSILPVTKRTGE--TKTYQIVGPVCETGDFLGHDRNLALTK 361 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 DLL + GAYG S YN+R E+MV+GS H+IR R T ++L L+ +P Sbjct: 362 -NDLLAVMSAGAYGMSMSSNYNTRPRAAEVMVDGSTVHLIRARETVEDLYALEKLP 416 >gi|149202882|ref|ZP_01879853.1| diaminopimelate decarboxylase [Roseovarius sp. TM1035] gi|149143428|gb|EDM31464.1| diaminopimelate decarboxylase [Roseovarius sp. TM1035] Length = 421 Score = 326 bits (834), Expect = 6e-87, Method: Composition-based stats. Identities = 211/421 (50%), Positives = 288/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G LHAE+V L ++A V TPFYCYST + +++ F A GMD +VCYA+K Sbjct: 1 MDHFLYHNGVLHAEDVPLSEIAEAVGTPFYCYSTATLSRHFRLFDEALAGMDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA LG+G+D+VS GE RA AA VP ERIVFSGVGKT DE+ +AL GI Sbjct: 61 AASNQAILKTLAGLGAGMDVVSGGEYARARAAGVPGERIVFSGVGKTRDEMRMALIGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ LN A+ LG +API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMAVLNAVALELGLRAPITIRVNPDVDAKTHAKIATGKSENKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+++ G+D+HIGSQ+ ++ F A++ + +LTQ LR++GH+I+ +D+GGGL Sbjct: 181 VYAQAAALPGLEVIGIDVHIGSQLTELAPFRLAYEKVAELTQVLRADGHDIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP ++Y +LI + G+L C+I +EPGR + + GILV++VI +K + Sbjct: 241 GIPYTRSNEAPPLPTEYGALIREVLGHLGCEIEIEPGRLIAGNAGILVSQVIYVKSGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +YDA+H+I + A D+VGP+CE+GD A R + Sbjct: 301 DFLILDAAMNDLIRPAMYDAHHDIVPLHEAAPGVEQRPYDVVGPVCESGDTFAKGRMLPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV S YN+R L+PE++V+G F +IR R TF E+I D+IP W Sbjct: 361 LAEGDLVAFRSAGAYGAVMSSEYNTRPLVPEVLVHGRDFAVIRGRPTFDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|56695249|ref|YP_165597.1| diaminopimelate decarboxylase [Ruegeria pomeroyi DSS-3] gi|56676986|gb|AAV93652.1| diaminopimelate decarboxylase [Ruegeria pomeroyi DSS-3] Length = 421 Score = 326 bits (834), Expect = 6e-87, Method: Composition-based stats. Identities = 207/421 (49%), Positives = 289/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L AE+V L ++A V +PFY YST + +++ F A DG D ++CYA+K Sbjct: 1 MDHFLYRDGALCAEDVPLAEIAATVGSPFYVYSTATLLRHFQLFDEALDGTDHLICYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA+++TLA G+G+D+VS GE RA AA VP RIVFSGVGKT +EI +AL GI Sbjct: 61 AASNQAILRTLAQAGAGMDVVSVGEYLRARAAGVPGVRIVFSGVGKTAEEIRVALVGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ +N A+ LGK API RVNPD++A TH KI+TGK E+KFGIPI + + Sbjct: 121 QFNVESEPEMEVINAIALELGKVAPITIRVNPDVDAKTHAKIATGKSENKFGIPIARASA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+++ G+D+HIGSQ+ + F A++ + +LT++LR+ GH+I+ +D+GGGL Sbjct: 181 VYAQAAALPGLEVVGIDVHIGSQLTDLAPFETAYRKVAELTERLRAEGHDIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +Y +LI + G+L C+I +EPGR + + G++V+KVI +K + Sbjct: 241 GIPYTRSNEAPPLPMEYGALIKRTLGHLGCEIEIEPGRLIAGNAGLMVSKVIYVKSGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +YDA+H+I +V P DIVGP+CE+GD A R + Sbjct: 301 DFLILDAAMNDLIRPAMYDAHHDIVPVVEPEPGVEPQPYDIVGPVCESGDTFAKARMMPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV S YNSR LIPE++V+G QF +IRPR +F E+I D+IP W Sbjct: 361 LAAGDLVAFRSAGAYGAVMSSEYNSRPLIPEVLVHGDQFAVIRPRPSFDEMINRDTIPPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|163851214|ref|YP_001639257.1| diaminopimelate decarboxylase [Methylobacterium extorquens PA1] gi|163662819|gb|ABY30186.1| diaminopimelate decarboxylase [Methylobacterium extorquens PA1] Length = 422 Score = 326 bits (834), Expect = 6e-87, Method: Composition-based stats. Identities = 225/421 (53%), Positives = 306/421 (72%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+V L LA V TPFYCYST +E++Y F+ AF G D +VC+A+K Sbjct: 1 MHHFHYRDGRLHAEDVDLTALAEEVGTPFYCYSTATLERHYRVFAEAFAGDDALVCFAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ TLAH G+G+DIVSEGELRRALAA VP ERIVFSGVGKT +E+ AL + I Sbjct: 61 ANSNQAVLATLAHQGAGMDIVSEGELRRALAAGVPGERIVFSGVGKTREEMAAALDANIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL L++ AV+ G+KAP++ RVNPD++A TH KISTGK ++KFGIPI + + Sbjct: 121 CFNVESEPELAALSEVAVARGRKAPVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG++I GVD HIGSQI + F A +LL +L + L ++GH + H+D GGGL Sbjct: 181 VYAGAARLPGLEIVGVDAHIGSQITDLTPFDNAARLLCELARDLLADGHRLHHVDFGGGL 240 Query: 241 GIAYHSDH-RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP + A+++ +F L + + E GR + + GILVT+VI +K + +K Sbjct: 241 GIPYRDDNAPPPDPTALAAILRPHFKPLGLRPVFEIGRMIAGNAGILVTRVIYVKPTDEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+A+H + + PA D + AD+VGP+CE+GD++AL R++ + Sbjct: 301 TFVIVDGAMNDLIRPTLYEAFHALRPVREPAPDTPRLTADVVGPVCESGDYLALGREMPM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDL+ + GAYGAVQ+ TYNSR L+PE++V G + ++RPR ++ +LI LD +P W Sbjct: 361 VAPGDLIAVMSAGAYGAVQACTYNSRRLVPEVLVTGDRSAVVRPRPSYDDLIRLDRLPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|163734181|ref|ZP_02141622.1| diaminopimelate decarboxylase [Roseobacter litoralis Och 149] gi|161392717|gb|EDQ17045.1| diaminopimelate decarboxylase [Roseobacter litoralis Och 149] Length = 421 Score = 326 bits (834), Expect = 6e-87, Method: Composition-based stats. Identities = 212/421 (50%), Positives = 292/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+V + ++A V TPFY YST + +++ F A DGMD +VCYA+K Sbjct: 1 MDHFLYRDGVLHAEDVPVPEIAATVGTPFYLYSTATLLRHFRLFDEALDGMDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VS GE RA AA VP ++IVFSGVGKT EI LAL+ GI Sbjct: 61 AASNQAILKTLAQAGAGMDVVSGGEYLRAKAAGVPGDKIVFSGVGKTAAEIRLALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ LN A+++G API RVNPD++A TH KI+TGK E+KFGIPI + H Sbjct: 121 QFNVESEPEMEVLNATALAMGVTAPITIRVNPDVDAKTHAKIATGKSENKFGIPISRAHE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A++L G+++ G+D+HIGSQ+ + F A+ + +LT QLR+ GHNI+ +D+GGGL Sbjct: 181 VYALAASLKGLEVIGIDVHIGSQLTDLAPFEAAYDKVAELTGQLRAQGHNIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP SDY ++I + G+L C+I +EPGR +V + GI+V++VI +K D+ Sbjct: 241 GIPYTRDNQAPPLPSDYGAMIKRKLGHLGCEIEIEPGRLIVGNAGIMVSEVIYVKSGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RP +Y+AYH+I +V P + DIVGP+CE+GD A R + Sbjct: 301 DFLIIDGAMNDLIRPAMYEAYHDIIPVVEPDPGIEQVKFDIVGPVCESGDTFARARVMPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 G+L+ GAYGAV S YNSR LIPE++V+ QF +IRPR TF E+I+ D+IP W Sbjct: 361 VAAGELVAFRSAGAYGAVMSSEYNSRPLIPEVLVHEDQFAVIRPRPTFDEMIKRDTIPTW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|148252717|ref|YP_001237302.1| diaminopimelate decarboxylase [Bradyrhizobium sp. BTAi1] gi|146404890|gb|ABQ33396.1| diaminopimelate decarboxylase [Bradyrhizobium sp. BTAi1] Length = 421 Score = 326 bits (834), Expect = 6e-87, Method: Composition-based stats. Identities = 215/421 (51%), Positives = 296/421 (70%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y +G LHAE V+L LA V TPFYCYST +E++Y F+ AF G D ++CYA+K Sbjct: 1 MNHFDYRDGVLHAEAVNLAGLAAQVGTPFYCYSTATLERHYRVFAEAFTGQDVLICYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++TLA LG+G D+VS GEL+RALAA +PA +IVFSGVGKT E+ AL + I+ Sbjct: 61 ANSNQSVLRTLAKLGAGADVVSGGELKRALAAGIPARKIVFSGVGKTEAELRAALAADIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C N+ESE EL L + A G A I+ RVNPD++A TH KISTGK E+KFGIP+ Sbjct: 121 CLNIESEPELDLLARLANETGHTARISVRVNPDVDAGTHAKISTGKSENKFGIPLEHARK 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ + G++++GVD+HIGSQI + AF++L + Q LR++GH I H+D GGGL Sbjct: 181 VYARAAKMKGIEVTGVDVHIGSQITDLGPMETAFRILAEFVQTLRADGHTISHVDFGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP + YA+++ + NL C ++ EPGR +V + GILV KVI +K K Sbjct: 241 GIPYHMDRAVPPEPAAYAAMVKRVSHNLGCTLMFEPGRMIVGNAGILVAKVIYVKHGEAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLY+A+H+I ++ PA + AD+VGP+CE+GD++AL+R + Sbjct: 301 NFVIIDAAMNDLIRPTLYEAHHDILPVIQPAPNAPAFVADVVGPVCESGDYLALDRTLPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PRPGDLL I +GAYGAVQ+ TYN+R L+PE++V G Q +IRPR+ ++LI +D+ W Sbjct: 361 PRPGDLLAIMTSGAYGAVQACTYNTRALVPEVLVKGDQSAVIRPRIEVEQLIAMDTPAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|163741842|ref|ZP_02149232.1| diaminopimelate decarboxylase [Phaeobacter gallaeciensis 2.10] gi|161385015|gb|EDQ09394.1| diaminopimelate decarboxylase [Phaeobacter gallaeciensis 2.10] Length = 421 Score = 326 bits (834), Expect = 7e-87, Method: Composition-based stats. Identities = 209/421 (49%), Positives = 294/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L+AE+V + ++A V TPFY YST + +++ F++A GMD +VCYA+K Sbjct: 1 MDHFLYRDGALYAEDVPVAEIAATVGTPFYLYSTATLLRHFHLFNDALKGMDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VS+GE RA AA VP +RIVFSGVGKT DEI AL GI Sbjct: 61 AASNQAILKTLAQAGAGMDVVSQGEYLRAKAAGVPGDRIVFSGVGKTQDEIRTALSGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ +N A+ LG API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMDVINAVALELGVVAPITVRVNPDVDAKTHAKIATGKSENKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A++LPG+K+ G+D+HIGSQ+ ++ F A++ + +LT+QLR++GH+I +D+GGGL Sbjct: 181 VYARAASLPGLKVIGIDVHIGSQLTELAPFELAYQKVAELTEQLRADGHDIHRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +Y +++ + G+L C+I +EPGR + + GI+V+KVI +K D+ Sbjct: 241 GIPYTRSNDTPPLPVEYGAMVQRTLGHLGCEIEIEPGRLIAGNAGIMVSKVIYVKSGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RP +Y+AYH+I ++ P+ DIVGP+CETGD A +R ++ Sbjct: 301 DFLIIDGAMNDLIRPAMYEAYHDIVPVIEPSAGVEQRAYDIVGPVCETGDTFARHRDMSP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR LIPE++VNG QF +IR R F E+I D+IP W Sbjct: 361 LEAGDLVAFRSAGAYGAVMASEYNSRPLIPEVLVNGDQFAVIRRRPDFDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|319781291|ref|YP_004140767.1| diaminopimelate decarboxylase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167179|gb|ADV10717.1| diaminopimelate decarboxylase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 422 Score = 326 bits (834), Expect = 7e-87, Method: Composition-based stats. Identities = 233/421 (55%), Positives = 321/421 (76%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y +G LHAE+V++ +A V TPFYCYST + ++Y F+ +F G+DT+VCYA+K Sbjct: 1 MNHFDYRDGVLHAEDVAIPDIAAQVGTPFYCYSTATLTRHYRVFAQSFAGLDTLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++TLA LG+G D+VSEGELRRALAA +PA +I+FSGVGKT E+D AL +GI Sbjct: 61 ANSNQAVLRTLAKLGAGADVVSEGELRRALAAGIPAGKILFSGVGKTAREMDFALAAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+LGK API+ R+NPD++A THKKISTGK E+KFGIP + Sbjct: 121 CFNVESEPELELLSARAVALGKVAPISLRINPDVDARTHKKISTGKAENKFGIPWQRARQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+TLPG++I+G+D HIGSQI +++ F AF LL DL LR++GH I+HID+GGGL Sbjct: 181 VYARAATLPGIRITGIDTHIGSQITELQPFDDAFALLVDLVGALRADGHAIEHIDLGGGL 240 Query: 241 GIAYH-SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y ++ PP YA ++ ++ L K++ EPGR +V + GILV++VI +K+ K Sbjct: 241 GIPYRVDNNPPPLPDAYAQIVRKHVTKLGLKVMFEPGRLIVGNAGILVSEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+++D AMND +RPTLYDA+H+I +V P D + D+VGP+CETGD+I L+R + Sbjct: 301 NFLVVDAAMNDLIRPTLYDAFHDIRPVVQPPADTPRMMVDVVGPVCETGDYIGLDRDLPR 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ + GAYGAVQ+GTYN+RLL+PE++V+G +FH++RPR+T+ +LI LDS+P W Sbjct: 361 LKAGDLIAVSTAGAYGAVQAGTYNTRLLVPEVLVDGDRFHVVRPRLTYDDLIGLDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|89091913|ref|ZP_01164868.1| diaminopimelate decarboxylase [Oceanospirillum sp. MED92] gi|89083648|gb|EAR62865.1| diaminopimelate decarboxylase [Oceanospirillum sp. MED92] Length = 418 Score = 325 bits (833), Expect = 7e-87, Method: Composition-based stats. Identities = 178/416 (42%), Positives = 263/416 (63%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y G L E+V+L +A TP Y YS A+E+ YL +++A +G ++VCYA+K Sbjct: 1 MDNFEYRNGQLCCEDVALAGVAEEFGTPTYVYSRDALERAYLAYADALEGHKSLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LG+G DIVS GEL R L A A +IVFSGVGK EI AL+ GI Sbjct: 61 ANSNLAVLNVLARLGAGFDIVSVGELERVLRAGGDAAKIVFSGVGKQPHEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ESE+EL+ +N+ A S GK A I+FRVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNIESEAELERVNEVAGSEGKVAAISFRVNPDVDAGTHPYISTGLKENKFGIDIDDAVR 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y+ A+ + V + G+D HIGSQ+ +++ F A + L ++ G I+H+D+GGGL Sbjct: 181 IYSRAADMDHVDVVGMDCHIGSQLTEVDPFLDALDRVLMLVDKIAEQGIKIKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP+ +Y + + + ++I EPGR + A+ G+++T+V +K + +K Sbjct: 241 GVCYTDE-VPPTPQEYIAEVLKKVEGRDLELIFEPGRSIAANAGVMLTRVEFLKCTGEKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP+LY AY EI ++ D+VGP+CETGDF+ +R + Sbjct: 300 FAIIDGAMNDLIRPSLYSAYQEIVPVMLRETGEEQQ-WDLVGPVCETGDFLGKDRSLN-L 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V + YNSR E+M++ ++ ++IR R + +L++ + + Sbjct: 358 EAGDLLAVCSAGAYGFVMASNYNSRGRPAEVMIDDNKSYLIRKRESLADLVKGEQL 413 >gi|114561631|ref|YP_749144.1| diaminopimelate decarboxylase [Shewanella frigidimarina NCIMB 400] gi|114332924|gb|ABI70306.1| diaminopimelate decarboxylase [Shewanella frigidimarina NCIMB 400] Length = 414 Score = 325 bits (833), Expect = 7e-87, Method: Composition-based stats. Identities = 188/416 (45%), Positives = 265/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y SL AE+ + KLA TP Y YS +E+++ F+NA ++CYA+K Sbjct: 1 MDYFSYQNNSLFAEDCDVAKLAKTHGTPLYIYSRATLERHWHAFNNAVADHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R L A +++VFSGVGKT+ E++ AL GIY Sbjct: 61 ANSNLAVLNVLARLGSGFDIVSGGELSRVLQAGGDPKKVVFSGVGKTVAEMEQALNIGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN+ A LGK AP++ R+NPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESSAELEQLNEVASRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEV 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A+ L + + GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 VFARAAELAHLHVKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLGEQGIQIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+S+ PP YA+ + + + K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTYNSE-TPPHPDAYAAALLERLNGRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP+LY A+ I + D DIVGP+CETGDF+ +R++A Sbjct: 300 FAIVDGAMNDLIRPSLYSAWQNIIPVQQ--NDAPTFAYDIVGPVCETGDFLGKDRQLA-V 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL I +GAYG + YNSR + EIMV+G ++R R T ++L + + + Sbjct: 357 KSGDLLAIRSSGAYGFAMASNYNSRPRVAEIMVDGGNDFVVRQRETLEQLWQGEHL 412 >gi|242279430|ref|YP_002991559.1| diaminopimelate decarboxylase [Desulfovibrio salexigens DSM 2638] gi|242122324|gb|ACS80020.1| diaminopimelate decarboxylase [Desulfovibrio salexigens DSM 2638] Length = 412 Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats. Identities = 184/415 (44%), Positives = 259/415 (62%), Gaps = 3/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+ LHAEN+S+ +LA TP Y YS + +++ F +AF G+D M CY++K Sbjct: 1 MHHFEIKNNELHAENISITELAKEYGTPLYIYSAATLRRHFEAFDSAFTGLDHMTCYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN +V+K LA +G+G+DIVS GEL RAL A VPA +IVFSGVGK EI AL++ I Sbjct: 61 ANSNLSVLKLLAEMGAGMDIVSGGELFRALKAGVPASKIVFSGVGKKAYEIAEALKADIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES E+ +N+ A S+ K A I+FR+NPD++ TH ISTG K++KFG+ + Sbjct: 121 MFNVESVGEMHRINEVAESMNKTARISFRINPDVDPKTHPYISTGMKKNKFGLDMETAKE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A L V G+D HIGSQ+ IE F +A L +L + G I+H+D+GGGL Sbjct: 181 AYKTAKELSNVSPIGMDCHIGSQLTTIEPFLEALDKLLAFRDELGAMGIEIEHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP ++ + + + K+ILEPGR + + GILV +VI KK+ K Sbjct: 241 GITYDEE-EPPHPKEFGEALSKALADKGLKVILEPGRVIAGNAGILVGEVIYTKKTPTKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I+D AMND +RP+LY +YH I + +R I D+VGPICE+GDF+A +R + Sbjct: 300 FLIVDAAMNDLVRPSLYQSYHRIAEVTQ--NNRPEIDYDVVGPICESGDFLAKDRMLPEM 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + G+L+ + GAYG S YNSRL EI+V+G + R R T+++L+ L+S Sbjct: 358 KQGELIAVFSAGAYGFTMSSNYNSRLRAAEIIVDGDDVIMARRRETYEDLLRLES 412 >gi|126666600|ref|ZP_01737578.1| diaminopimelate decarboxylase [Marinobacter sp. ELB17] gi|126628988|gb|EAZ99607.1| diaminopimelate decarboxylase [Marinobacter sp. ELB17] Length = 416 Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats. Identities = 182/418 (43%), Positives = 255/418 (61%), Gaps = 4/418 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE V L ++A TP Y YS +E++Y + NA +VCYA+K Sbjct: 1 MDYFIYKNDELWAEGVPLARIAEQHGTPAYVYSRATLERHYRAYDNALQNHPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LG+G DIVS GEL R + A ++VFSGVGK E+ AL+ G+ Sbjct: 61 ANSNLAVLDVLARLGAGFDIVSAGELERVIRAGGNPAKVVFSGVGKQPWEMRRALEVGVR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES+ EL LN A LG KAP++ RVNPD++A TH ISTG KE+KFGI I + Sbjct: 121 CFNVESDIELDRLNAIAGELGVKAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIEVAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A++LP + + GVD HIGSQ+ + F A + L +L G I+H+D+GGGL Sbjct: 181 IYARAASLPHLDVRGVDCHIGSQLTTVAPFLDALDRVLALVDKLAEQGVEIKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + PP +Y I G+ + ++ILEPGR + A+ G+L+T+V +K + + Sbjct: 241 GVTYNDE-TPPQPGEYVEAILARLGDRKLELILEPGRSIAANAGVLLTRVEFLKCTEHRN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ I + + D+VGP+CETGDF+ +R+++ Sbjct: 300 FAIIDAAMNDLIRPALYGAWQAIVPVAPH-SNGDEKAWDLVGPVCETGDFLGKDRQLS-L 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 GDLL + GAYG V S YN+R PE+MV+G Q H++R R T +E + + +P Sbjct: 358 NAGDLLAVRSAGAYGFVMSSNYNTRNRPPELMVDGDQVHVVRRRETVEEQLAPESCLP 415 >gi|308051401|ref|YP_003914967.1| diaminopimelate decarboxylase [Ferrimonas balearica DSM 9799] gi|307633591|gb|ADN77893.1| diaminopimelate decarboxylase [Ferrimonas balearica DSM 9799] Length = 414 Score = 325 bits (833), Expect = 9e-87, Method: Composition-based stats. Identities = 187/416 (44%), Positives = 264/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L AE V L ++A TP Y YS IE+++ F A ++CYA+K Sbjct: 1 MDHFSYRQGALSAEEVPLAEVAAAYGTPCYVYSRATIERHFHAFDRAVGDHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT DE+ ALQ+GIY Sbjct: 61 ANSNLAVLNLLARLGSGFDIVSGGELARVIQAGGDPGKVVFSGVGKTADEMRQALQAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL+ LN+ A ++G KAP++ R+NPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESEAELERLNEVAGAMGLKAPVSLRINPDVDAGTHPYISTGLKENKFGIAMARAEQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++ A++LP +++ G D HIGSQ+ + F A L L +L G + H+DVGGGL Sbjct: 181 VFQRAASLPNLQVKGADCHIGSQLTTLPPFIDALDRLLALVDRLAELGIVLSHLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP +YA + ++ GN +ILEPGR ++A+ G+L+T+V +K D+ Sbjct: 241 GVRYDEE-SPPLPDEYARALREHLGNRPLTLILEPGRAIMANAGVLLTEVAYLKTGEDRH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP+LY A+ I + D H D+VGP+CETGDF+ R++ Sbjct: 300 FAIVDAAMNDLIRPSLYSAWQAIIPVE--PRDGPHQTYDVVGPVCETGDFLGKGREL-CI 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL + +GAYG + YNSR E+MV+G H+IR R T ++L + +S+ Sbjct: 357 EPGDLLAVRSSGAYGFTMASNYNSRPRAAEVMVDGDAHHLIRARETVEQLWQGESL 412 >gi|254501211|ref|ZP_05113362.1| diaminopimelate decarboxylase [Labrenzia alexandrii DFL-11] gi|222437282|gb|EEE43961.1| diaminopimelate decarboxylase [Labrenzia alexandrii DFL-11] Length = 424 Score = 325 bits (833), Expect = 9e-87, Method: Composition-based stats. Identities = 222/422 (52%), Positives = 299/422 (70%), Gaps = 1/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G+L AE+V++E++A V TPFY YST + ++Y FS+AF + ++VCYA+K Sbjct: 1 MHHFDYKGGALFAEDVAIEEIAREVGTPFYVYSTATLTRHYEVFSSAFADIPSLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ TLA LG+G+D+VSEGELRRA AA VPA +IVFSGVGKT E AL I Sbjct: 61 ANSNQAVLATLAQLGAGMDVVSEGELRRARAAGVPANKIVFSGVGKTETEQAYALTEDIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL L++ A +GK A ++ R+NPD++A TH KI+TGK E+KFGIP + Sbjct: 121 CFNVESEPELHQLSRVATKIGKTARVSMRINPDVDAKTHAKIATGKAENKFGIPWQRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A++LPG+K++G+DMHIGSQI ++E F AF L +L LR GH I H+D+GGGL Sbjct: 181 VYATAASLPGLKVTGIDMHIGSQITELEPFDSAFARLGELITDLRGQGHAIDHVDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L CK++ EPGR + + GILVT+VI +K+ ADK Sbjct: 241 GIPYVTDNDPPPHPDAYAEVVKKHVRELDCKVMFEPGRMIAGNAGILVTQVIYVKEGADK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D MND +RPTLY+AYHE+ + P + AD+VGP+CETGDF+A NR + Sbjct: 301 NFVIVDAGMNDLIRPTLYEAYHEVRPVSEPDVNADRFTADVVGPVCETGDFLAQNRDMPK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GD+L + GAYG+VQS TYNSRLL+PE++VN QF +IRPR +++EL++LD IP W Sbjct: 361 VNAGDMLAVYSAGAYGSVQSSTYNSRLLVPEVLVNADQFAVIRPRPSYEELLDLDQIPDW 420 Query: 420 LQ 421 L+ Sbjct: 421 LK 422 >gi|302189433|ref|ZP_07266106.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae 642] Length = 415 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 196/416 (47%), Positives = 259/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AERIVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAERIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L DL +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP ++DY + + ++ EPGRF+VA+ G L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGTLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ E+ + D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMEVTAVR--PRDSEPRAYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+GSQ +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESL 412 >gi|298489348|ref|ZP_07007362.1| Diaminopimelate decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156139|gb|EFH97245.1| Diaminopimelate decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 415 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 194/416 (46%), Positives = 259/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AE+IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELDVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIANAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L DL +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP ++DY + + ++ EPGRF+VA+ G L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTAVR--PRDGEPRAYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+GSQ +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESL 412 >gi|330900736|gb|EGH32155.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 415 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 193/416 (46%), Positives = 258/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AE+IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L DL +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP +++Y + + ++ EPGRF+VA+ G L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAAEYIKAVRERLAGRDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVT--AGRPRDSEPRAYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+GSQ +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESL 412 >gi|156105141|gb|ABU49109.1| diaminopimelate decarboxylase [Mesorhizobium ciceri] Length = 422 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 233/421 (55%), Positives = 321/421 (76%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y +G LHAE+V++ +A V TPFYCYST + ++Y F+ +F G+DT+VCYA+K Sbjct: 1 MNHFDYRDGVLHAEDVAIPDIAAQVGTPFYCYSTATLTRHYRVFAQSFAGLDTLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++TLA LG+G D+VSEGELRRALAA +PA +I+FSGVGKT E+D AL +GI Sbjct: 61 ANSNQAVLRTLAKLGAGADVVSEGELRRALAAGIPAGKILFSGVGKTAREMDFALAAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+LGK API+ R+NPD++A THKKISTGK E+KFGIP + Sbjct: 121 CFNVESEPELELLSARAVALGKVAPISLRINPDVDARTHKKISTGKAENKFGIPWQRARQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+TLPG++I+G+D HIGSQI +++ F AF LL DL LR++GH I+HID+GGGL Sbjct: 181 VYARAATLPGIRITGIDTHIGSQITELQPFDDAFALLVDLVGALRADGHAIEHIDLGGGL 240 Query: 241 GIAYH-SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y ++ PP YA ++ ++ L K++ EPGR +V + GILV++VI +K+ K Sbjct: 241 GIPYRVDNNPPPLPDAYAQIVRKHVTKLGLKVMFEPGRLIVGNAGILVSEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+++D AMND +RPTLYDA+H+I +V P D + D+VGP+CETGD+I L+R + Sbjct: 301 NFLVVDAAMNDLIRPTLYDAFHDIRPVVQPPADTPRMMVDVVGPVCETGDYIGLDRDLPR 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ + GAYGAVQ+GTYN+RLL+PE++V+G +FH++RPR+T+ +LI LDS+P W Sbjct: 361 LKAGDLIAVSTAGAYGAVQAGTYNTRLLVPEVLVDGDRFHVVRPRLTYDDLIGLDSMPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|71738109|ref|YP_277093.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482608|ref|ZP_05636649.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624630|ref|ZP_06457584.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651144|ref|ZP_06482487.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aesculi str. 2250] gi|71558662|gb|AAZ37873.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|320326562|gb|EFW82613.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. glycinea str. B076] gi|320331372|gb|EFW87313.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. glycinea str. race 4] gi|330870014|gb|EGH04723.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330881320|gb|EGH15469.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. glycinea str. race 4] gi|331012751|gb|EGH92807.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 415 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 194/416 (46%), Positives = 259/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AE+IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELDVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L DL +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP ++DY + + ++ EPGRF+VA+ G L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTAVR--PRDGEPRAYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+GSQ +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESL 412 >gi|53804982|ref|YP_113352.1| diaminopimelate decarboxylase [Methylococcus capsulatus str. Bath] gi|53758743|gb|AAU93034.1| diaminopimelate decarboxylase [Methylococcus capsulatus str. Bath] Length = 415 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 182/416 (43%), Positives = 249/416 (59%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LH E+V L +A TP Y YS +E+++ F A +VCYA+K Sbjct: 1 MDHFNYRDGILHVEDVPLSAIAEQHGTPCYVYSRATLERHWHAFDAALGDCPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN A++ LA LGSG DIVS GEL R LAA R+VFSGVGK DE+ AL +GI Sbjct: 61 ANSNIAILNLLARLGSGFDIVSVGELERVLAAGGDPSRVVFSGVGKREDELARALDTGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVE EL L++ A G KAP++ RVNPD++A TH ISTG E+KFGI + + Sbjct: 121 CFNVEVAEELDRLDRLAGERGVKAPVSLRVNPDVDAGTHPYISTGLSENKFGIEVEEALV 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A+ +P +++ G+D HIGSQ+ F A + L +LR G I+H+D+GGGL Sbjct: 181 QYRRAARMPNLEVVGIDCHIGSQLTSSMPFIDALDRVLALVARLRGEGIAIRHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP ++YA + + G +I++EPGR + + GIL+T++ +K + K Sbjct: 241 GIRYRDE-DPPHPTEYAEQLFRRLGRHDFEILIEPGRAVAGNAGILLTRLEYLKANQTKH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ EI + P D D+VGP+CETGDF+ +R++ L Sbjct: 300 FAIVDAAMNDLLRPALYGAWQEIVPVA-PRNDVESHSYDVVGPVCETGDFLGKSRELRLV 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL + GAYG S YNSR EI+V+GS ++IR R L + + Sbjct: 359 -PGDLLAVRSAGAYGFSMSSNYNSRPRPAEILVDGSAVYLIRERENVARLFAGERL 413 >gi|330941151|gb|EGH44030.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 415 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 194/416 (46%), Positives = 258/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AE+IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +K+ GVD HIGSQ+ +E F A L L +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLKVIGVDCHIGSQLTTLEPFIDALDRLLALVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP ++DY + + ++ EPGRF+VA+ G L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTAVR--PRDSEPRAYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+GSQ +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESL 412 >gi|330984813|gb|EGH82916.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 415 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 194/416 (46%), Positives = 259/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AE+IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELDVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L DL +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP ++DY + + ++ EPGRF+VA+ G L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTAVR--PRDSEPRAYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+GSQ +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESL 412 >gi|85714907|ref|ZP_01045893.1| diaminopimelate decarboxylase [Nitrobacter sp. Nb-311A] gi|85698393|gb|EAQ36264.1| diaminopimelate decarboxylase [Nitrobacter sp. Nb-311A] Length = 421 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 217/421 (51%), Positives = 293/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE V L LA VV TPFYCYST +E++Y F+ AF G D +VCYA+K Sbjct: 1 MHHFDYRDGVLHAEGVDLSTLAEVVGTPFYCYSTATLERHYRVFAEAFAGTDHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++T+A LG+G D+VS GEL+RALAA +PA +I+FSGVGKT E+ AL + + Sbjct: 61 ANSNQSVLRTMAKLGAGADVVSGGELKRALAAEIPANKILFSGVGKTEAELRAALAADVL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVESE EL L++ A G+ A ++ R+NPD+++ H KISTG+ E+KFGIPI Q + Sbjct: 121 CINVESEPELDLLSRLASETGRTARVSVRINPDVDSGAHAKISTGRLENKFGIPITQARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+K++GVDMHIGSQI + AF+LL D LR++GH + H+D GGGL Sbjct: 181 VYARAAKLPGIKVTGVDMHIGSQITDLGPMETAFRLLADFVSTLRADGHVVSHVDFGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 Y PP YA ++ + NL C ++ EPGR +V + GILVT+VI +K + Sbjct: 241 GIPYYEDRSAPPEPLAYADMVRRVTRNLDCTLMFEPGRMIVGNAGILVTRVIYVKHGNAR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLY+AYH+I + D + AD+VGP+CETGD++AL R + Sbjct: 301 NFVIIDAAMNDLIRPTLYEAYHQIMPVRAAPKDAAVMVADVVGPVCETGDYLALERNLPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+ GDLL I GAYGAVQSGTYN+R LIPE++V G Q+ ++RPR+ ++LI +D + W Sbjct: 361 PQAGDLLAIMTAGAYGAVQSGTYNTRALIPEVLVKGDQYAVVRPRIEVEQLIAMDKLAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|114706749|ref|ZP_01439649.1| diaminopimelate decarboxylase protein [Fulvimarina pelagi HTCC2506] gi|114537697|gb|EAU40821.1| diaminopimelate decarboxylase protein [Fulvimarina pelagi HTCC2506] Length = 422 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 225/421 (53%), Positives = 301/421 (71%), Gaps = 2/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F++ +G LHAE+V + +A + TPFYCYST + ++Y FS+AF +D MVCYA+K Sbjct: 1 MNHFEFKDGLLHAEDVPVTTIAKDIGTPFYCYSTATLLRHYDVFSSAFADIDAMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTLA G+G D+VS GEL RAL + ++I+FSGVGKTI EID+A+ SGI+ Sbjct: 61 ANSNQAVLKTLADRGAGADVVSGGELLRALRVGIDPKKIMFSGVGKTIAEIDMAIASGIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ESE+EL+ ++ RAV G A ++FR+NPD++A TH KISTG+K DKFGI + S Sbjct: 121 CFNIESENELELISARAVDAGLTAHVSFRINPDVDAKTHAKISTGRKSDKFGIAYDRAES 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A LPGV+++G+DMHIGSQI ++ F +AF L L +LR+ GH I HID+GGGL Sbjct: 181 IYARARELPGVEVTGIDMHIGSQIIDLKPFDEAFDRLATLVHRLRAAGHEISHIDLGGGL 240 Query: 241 G-IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 G ++D PP YA ++ ++ +L KI+ EPGR +VA+ GILV +V+ +KK K Sbjct: 241 GVPYKNADATPPEPHAYAEIVKRHVRDLGAKIVFEPGRMIVANAGILVARVLYVKKDEGK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+A+HE V A +R I ADIVGPICE+GDF+ +R+I Sbjct: 301 TFVIVDAAMNDLIRPTLYEAWHE-IQPVERAANRKTITADIVGPICESGDFLGKDREIVE 359 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+++ GAYGAVQS TYNSR LI E +V G ++ +IR R T ELI LD IP W Sbjct: 360 VAEGDLVFLSSAGAYGAVQSSTYNSRPLIAETLVKGGEYAVIRERQTIDELIGLDHIPEW 419 Query: 420 L 420 L Sbjct: 420 L 420 >gi|330976601|gb|EGH76645.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 415 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 194/416 (46%), Positives = 259/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AE+IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L DL +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP ++DY + + ++ EPGRF+VA+ G L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTAVR--PRDSEPRAYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+GSQ +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESL 412 >gi|312963815|ref|ZP_07778286.1| Diaminopimelate decarboxylase [Pseudomonas fluorescens WH6] gi|311281850|gb|EFQ60460.1| Diaminopimelate decarboxylase [Pseudomonas fluorescens WH6] Length = 415 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 189/416 (45%), Positives = 259/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +F++A +G+ +VCYA+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAQRFGTPTYVYSRAHIEAQYRSFTDALNGIPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA A++IVFSGVGKT D++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGQADKIVFSGVGKTRDDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES EL+ L A +G +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNIESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP +++ GVD HIGSQ+ + F A L LT +L G +QHID+GGG+ Sbjct: 181 VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFIDALDRLLALTDRLGDCGIYLQHIDLGGGV 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP +DY + + ++ EPGR++VA+ G+L+T+V +K + K Sbjct: 241 GVQYRDE-EPPLIADYIQAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEYKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ + + A DIVGPICETGDF+A +R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMNVTAVTPRASVAR--AYDIVGPICETGDFLAKDRQLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G Q +R R T EL +S+ Sbjct: 357 EEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQAFEVRRRETVAELYAGESL 412 >gi|226946776|ref|YP_002801849.1| diaminopimelate decarboxylase [Azotobacter vinelandii DJ] gi|226721703|gb|ACO80874.1| diaminopimelate decarboxylase [Azotobacter vinelandii DJ] Length = 415 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 267/416 (64%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L AE V+L +A TP Y YS IE+ Y +++A GM +VC+A+K Sbjct: 1 MEPFIYRDGTLFAEGVALSAIAARFGTPTYVYSRAHIEERYRAYADALAGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LG+G DIVS GEL R LAA R+VFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLAVLNLLARLGAGFDIVSRGELERVLAAGGDPARVVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES+ EL+ L + A LG KAP++ RVNPD++A TH ISTG KE+KFGI I Q Sbjct: 121 CFNVESDVELERLQEVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIDIEQAEE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LP +++ G+D HIGSQ+ + F L L +L + G I+H+D+GGGL Sbjct: 181 VYARAAELPNLEVLGIDCHIGSQLTTLSPFLDTLDRLLLLVDRLAARGIVIRHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP+ DY + + + ++ EPGR +VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-QPPAPGDYIAAVRERIEGRALALVFEPGRSIVANAGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP LY A+ ++ + G+ D+VGP+CETGDF+A +R++AL Sbjct: 300 FAVIDAAMNDLIRPALYQAWMDVVPVTPHGGEVC--SYDLVGPVCETGDFLAKDRELALV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G + H+IR R T ++L +S+ Sbjct: 358 E-GDLLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGERMHLIRRRETIEDLYAGESL 412 >gi|330892010|gb|EGH24671.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. mori str. 301020] Length = 415 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 194/416 (46%), Positives = 258/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AE+IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELDVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L DL +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALARLLDLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP ++DY + + + EPGRF+VA+ G L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAADYIKAVRERLAGRDLGLFFEPGRFIVANAGALLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTAVR--PRDSEPCAYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+GSQ +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESL 412 >gi|66043452|ref|YP_233293.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae B728a] gi|63254159|gb|AAY35255.1| Diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae B728a] gi|330970500|gb|EGH70566.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 415 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 193/416 (46%), Positives = 258/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AE+IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L L +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLALVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP ++DY + + ++ EPGRF+VA+ G L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTAVR--PRDSEPRAYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+GSQ +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESL 412 >gi|213970728|ref|ZP_03398853.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato T1] gi|301382616|ref|ZP_07231034.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato Max13] gi|302061756|ref|ZP_07253297.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato K40] gi|302133635|ref|ZP_07259625.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924562|gb|EEB58132.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato T1] gi|331017916|gb|EGH97972.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 415 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 195/416 (46%), Positives = 259/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y F++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAFADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AERIVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAERIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L DL +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP + DY + + ++ EPGRF+VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAGDYIKAVRERLAGRDLGLLFEPGRFIVANAGVLLTQVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTAVR--PRDSEPRAYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G+Q +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGTQAFEVRRRETVAELFAGESL 412 >gi|330964219|gb|EGH64479.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 415 Score = 324 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 195/416 (46%), Positives = 259/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y F++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAFADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AERIVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAERIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELDVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L DL +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP + DY + + ++ EPGRF+VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAGDYIKAVRERLAGRDLGLLFEPGRFIVANAGVLLTQVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTAVR--PRDSEPRAYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G+Q +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGTQAFEVRRRETVAELFAGESL 412 >gi|28867457|ref|NP_790076.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato str. DC3000] gi|28850691|gb|AAO53771.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato str. DC3000] Length = 415 Score = 324 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 195/416 (46%), Positives = 258/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y F++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAFADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AERIVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAERIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L DL +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y PP + DY + + ++ EPGRF+VA+ G+L+T+V +K + K Sbjct: 241 GVRYR-HEEPPLAGDYIKAVRERLAGRDLGLLFEPGRFIVANAGVLLTQVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTAVR--PRDSEPRAYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G+Q +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGTQAFEVRRRETVAELFAGESL 412 >gi|153873428|ref|ZP_02002015.1| diaminopimelate decarboxylase [Beggiatoa sp. PS] gi|152070106|gb|EDN67985.1| diaminopimelate decarboxylase [Beggiatoa sp. PS] Length = 414 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 193/416 (46%), Positives = 265/416 (63%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L+AE+V+L +A TP Y YS +E+++ F NA ++CYA+K Sbjct: 1 MDYFNYRDGILYAEDVNLLTVAKAYGTPCYVYSRATLERHWHAFDNALKNHRHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LGSG DIVS GEL R L A +IVFSGVGKT+ E+ AL+ GI Sbjct: 61 ANSNLTVLSVLARLGSGFDIVSGGELERVLRAGGDPNKIVFSGVGKTVIEMRRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL LNQ A +GK AP++ RVNPD++A TH ISTG KE+KFGI I+ Sbjct: 121 CFNVESEAELLRLNQVAGDMGKMAPVSLRVNPDVDAKTHPYISTGLKENKFGIDINSAID 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A LP ++I G+D HIGSQ+ Q SF A + + L LR ++QHID+GGGL Sbjct: 181 VYKKAKALPHLQIIGIDCHIGSQLTQTTSFVDALQRVIVLVNTLRDKNIHLQHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ YH++ PP +Y + Q G+ +IILEPGR + A+ G+L+TKV +K +ADK Sbjct: 241 GVRYHTE-TPPEPENYVQALTQVLGDTPYEIILEPGRAIAANAGVLLTKVEYLKHTADKH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ +I + + + DIVGPICETGDF+ NR +A Sbjct: 300 FAIVDAAMNDLLRPALYTAWQDILPVQPRKNETEQ-NYDIVGPICETGDFLGKNRALA-L 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 D+L + +GAYG S YN+R + E+MV+G Q ++R R T +++ L+++ Sbjct: 358 HESDVLAVRTSGAYGFTMSSNYNTRPRVAELMVDGEQVAVVRRRETIDDILALENL 413 >gi|229593312|ref|YP_002875431.1| diaminopimelate decarboxylase [Pseudomonas fluorescens SBW25] gi|229365178|emb|CAY53443.1| diaminopimelate decarboxylase [Pseudomonas fluorescens SBW25] Length = 415 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 257/416 (61%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +F++A DG+ +VCYA+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA A++IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKADKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES EL+ L A +G +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNIESTDELERLQGVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP +++ GVD HIGSQ+ + F A L L +L G + HID+GGG+ Sbjct: 181 VYIRAAQLPNLEVLGVDCHIGSQLTSLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP +DY + + ++ EPGR++VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLIADYIQAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ + + + DIVGPICETGDF+A +R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMNVTAVTPRNSEAR--AYDIVGPICETGDFLAKDRQLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G Q +R R T EL +S+ Sbjct: 357 EEGDLLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESL 412 >gi|152997590|ref|YP_001342425.1| diaminopimelate decarboxylase [Marinomonas sp. MWYL1] gi|150838514|gb|ABR72490.1| diaminopimelate decarboxylase [Marinomonas sp. MWYL1] Length = 417 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 180/419 (42%), Positives = 259/419 (61%), Gaps = 3/419 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +LHAE+V+L +A+ TP Y YS +E++Y +++AF T++CYA+K Sbjct: 1 MDFFNYSNQTLHAEDVALSDVANQYGTPCYVYSRATLERHYKAYADAFASHPTLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SN A++ LA LGSG DIVS GEL R L A +++FSG+GK +E+ AL+ GI+ Sbjct: 61 ACSNIAILNVLARLGSGFDIVSVGELERVLKAGGEPSKVMFSGLGKQAEEMRRALEVGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL L++ A +GK AP++ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESEAELYRLDKVAGEMGKLAPVSLRVNPDVDAKTHPYISTGLKENKFGIDIKDAVR 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A LP + + GVD HIGSQ+ +++ F F L L +L G I+H+D+GGGL Sbjct: 181 IYKIAHELPNLNVMGVDCHIGSQLTELKPFLDTFDRLIGLVDELAEVGITIKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP +DYA L+ + ++ EPGR + A+ GIL+T+V +K + K Sbjct: 241 GVRYRDE-VPPEPADYAKLLLEKVKGRNFELAFEPGRSIAANAGILLTQVEFLKCNPHKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP+LY A+ I + + D+VGPICETGDF+ +R++ Sbjct: 300 FAIIDGAMNDLIRPSLYGAWMNIVPVSLLPTAEGKRNYDLVGPICETGDFLGKDREL-DI 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + GAYG S YNSR E+MV+G + ++IR R T + + + +P Sbjct: 359 QAGDLLAVRSAGAYGFTMSSNYNSRNRAAEVMVDGDKTYLIRARETIEHQLAGEQILPD 417 >gi|92115227|ref|YP_575155.1| diaminopimelate decarboxylase [Chromohalobacter salexigens DSM 3043] gi|91798317|gb|ABE60456.1| diaminopimelate decarboxylase [Chromohalobacter salexigens DSM 3043] Length = 418 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 176/414 (42%), Positives = 246/414 (59%), Gaps = 3/414 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAENV L +A TP Y YS +++ +S+A ++CYA+K Sbjct: 1 MDHFNYRDGHLHAENVPLTDIAERFGTPCYVYSRATFTRHFKAYSDALGDHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LG+G DIVS GEL R LAA ++VFSGV K E+ AL+ GI Sbjct: 61 ANSNLAVLDLLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVAKQAGEMARALEVGIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ LNQ A G+ A ++ RVNPD++A TH ISTG K +KFGI + + + Sbjct: 121 CFNVESLPELERLNQVAGECGQVARVSLRVNPDVDAKTHPYISTGLKANKFGIAVDEAFA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP ++I G+D HIGSQ+ ++ F A L L +L G I+H+D+GGGL Sbjct: 181 VYQRAAELPNLEIVGLDCHIGSQLTELAPFLDALDRLLILLDRLNEAGITIEHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP+ DYA + + ++ EPGR + A+ G+++T+V +K + Sbjct: 241 GVPYQDE-QPPAPYDYARALLERLDGRDLTLLFEPGRSIAANAGVMLTRVEYLKPGETQH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY A+ I V+ R D+VGP+CETGDF+ R++A Sbjct: 300 FAIVDAGMNDLIRPALYQAWQRIV-PVDTRQARETAVYDVVGPVCETGDFLGKARELA-I 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 PGDLL + GAYG V + YNSR E+MV+G ++R R T L + Sbjct: 358 APGDLLAVRSAGAYGFVMASHYNSRPRPAELMVDGDNVQVVRERETLDALWAGE 411 >gi|70733296|ref|YP_263070.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf-5] gi|68347595|gb|AAY95201.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf-5] Length = 415 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 192/416 (46%), Positives = 258/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y ++ A GM +VC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYQAYAQALAGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA A++IVFSGVGKT D++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGQADKIVFSGVGKTRDDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L A LG +AP++ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESAEELERLQLVAAELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIATAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP ++I GVD HIGSQ+ +E F A L DL +L G ++HID+GGGL Sbjct: 181 VYIRAAQLPNLEIVGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGECGIYLRHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP ++DY + + ++ EPGRF+VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAADYVKAVRERLDGRDLALVFEPGRFIVANAGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ +++ + D DIVGPICETGDF+A R +A Sbjct: 300 FAIVDGAMNDLIRPALYQAWMDVSAVR--PRDTEPRTYDIVGPICETGDFLAKERTLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G Q +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQAVEVRRRETVAELFAGESL 412 >gi|89069733|ref|ZP_01157069.1| Orn/DAP/Arg decarboxylase, family 2 [Oceanicola granulosus HTCC2516] gi|89044679|gb|EAR50790.1| Orn/DAP/Arg decarboxylase, family 2 [Oceanicola granulosus HTCC2516] Length = 421 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 196/421 (46%), Positives = 286/421 (67%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L AE+V+L+ +A V TP Y YS + ++Y F+ A +G+D ++C+++K Sbjct: 1 MDHFLYRDGRLMAEDVALDDIAAAVGTPVYVYSAKTLLRHYGLFAQALEGLDHLICFSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN A++ LA G+G+D+VS GE RA AA VP ERIVFSGVGKT +E+ LAL+ GI Sbjct: 61 SLSNLAILSLLAREGAGMDVVSGGEYARARAAGVPGERIVFSGVGKTREEMRLALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN+ESE E++ L++ A +G AP+ RVNPD++A TH KISTGK E+KFGIPI + Sbjct: 121 QFNLESEPEMRALSEVASGMGVVAPVTVRVNPDVDARTHAKISTGKSENKFGIPIRKARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+++ G+D+HIGSQ+ ++ F +A++ + DLT LR++GH+I+ +D+GGGL Sbjct: 181 VYAEAAALPGLEVVGIDVHIGSQLIELGPFEQAYRKVADLTATLRADGHDIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP DY +LI + G+L ++ +EPGR + + G+L+++VI +K+ + Sbjct: 241 GIPYTRSNEVPPLPLDYGALIKRTVGDLGVEVQIEPGRLIAGNSGVLLSRVIYVKEGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +YDA+H+I + PA D+VGPICE+GD A R + Sbjct: 301 DFLILDGAMNDLVRPAMYDAWHDIVPVAEPAAGGATRDFDVVGPICESGDTFARARPLPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR L+PE++V+G F +IR R T++ELI DSIP W Sbjct: 361 LAAGDLVAFRSAGAYGAVMASEYNSRPLVPEVLVSGDHFAVIRQRPTYEELIARDSIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|13473029|ref|NP_104596.1| diaminopimelate decarboxylase [Mesorhizobium loti MAFF303099] gi|14023777|dbj|BAB50382.1| diaminopimelate decarboxylase [Mesorhizobium loti MAFF303099] Length = 422 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 232/421 (55%), Positives = 320/421 (76%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y +G LHAE+V++ +A V TPFYCYST + ++Y F+ AF G+D +VCYA+K Sbjct: 1 MNHFDYRDGVLHAEDVAIPDIAAQVGTPFYCYSTATLTRHYRVFAQAFAGLDALVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++TLA LG+G D+VSEGELRRALAA +PA +I+FSGVGKT EIDLAL++GI Sbjct: 61 ANSNQAVLRTLARLGAGADVVSEGELRRALAAGIPASKILFSGVGKTAREIDLALEAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+LGK API+ R+NPD++A THKKISTGK E+KFGI + Sbjct: 121 CFNVESEPELELLSARAVALGKVAPISLRINPDVDAKTHKKISTGKAENKFGIAWQRARQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+TLPG+K++G+D HIGSQI +++ F AF LL DL LR++GH I+H+D+GGGL Sbjct: 181 VYARAATLPGIKVTGIDTHIGSQITELQPFDDAFALLVDLVGALRADGHAIEHVDLGGGL 240 Query: 241 GIAYH-SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y ++ PP YA ++ ++ L K++ EPGR +V + GILV++VI +K+ K Sbjct: 241 GIPYRVDNNPPPLPDAYAQIVRKHVTKLGLKVMFEPGRLIVGNAGILVSEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+++D AMND +RPTLYDA+H+I +V P D + D+VG +CETGD++ L+R + Sbjct: 301 NFLVVDAAMNDLIRPTLYDAFHDIRPVVQPPADTPRMMVDVVGQVCETGDYLGLDRDLPR 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ + GAYGAVQ+GTYN+RLL+PE++V+G +FHI+RPR+T+ +LI LDS+P W Sbjct: 361 LKAGDLVAVSTAGAYGAVQAGTYNTRLLVPEVLVDGDRFHIVRPRLTYDDLIGLDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|110835189|ref|YP_694048.1| diaminopimelate decarboxylase [Alcanivorax borkumensis SK2] gi|110648300|emb|CAL17776.1| diaminopimelate decarboxylase [Alcanivorax borkumensis SK2] Length = 413 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 187/416 (44%), Positives = 264/416 (63%), Gaps = 5/416 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y +G L AE + +E+LA TP Y YS A+E++YL F AF VCYA+K Sbjct: 1 MDHFQYRDGELFAEELPVEQLADRFGTPLYLYSRAALERHYLAFDEAFGDHPHQVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA +G+G DIVS GEL R L A ++IVFSGVGKT +E+ AL++ I+ Sbjct: 61 ANSNLAVLNVLARVGAGFDIVSGGELERVLRAGGDPDKIVFSGVGKTANEMAAALKANIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A L ++APIA RVNPD++A TH ISTG K++KFG+ I + + Sbjct: 121 CFNVESAAELELLNLVAGELDREAPIAIRVNPDVDAQTHPYISTGLKDNKFGVDITKAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY A+ LP +KI G+D HIGSQ+ +++ F A + + L QL+ +G I H+D+GGGL Sbjct: 181 LYQRAAELPHIKILGIDCHIGSQLTKLDPFEAALERVLKLLAQLQEHGIEIHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +EPGR + A+ GI VT+V+ +K + K Sbjct: 241 GVTYDDETPPDRSDYVQALLKHI--PGELPVHIEPGRSIAANAGIFVTQVLFLKPTEHKN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP+LY A+ I + D + DIVGP+CETGDF+ +R +A Sbjct: 299 FAIVDGAMNDLIRPSLYSAWQNIVPVKPHEADCRN--WDIVGPVCETGDFLGKDRALA-L 355 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG + YNSR E+MV+G Q ++R R T+ E ++L+S+ Sbjct: 356 ETGDLLAVRSAGAYGFAMASNYNSRNRPAEVMVDGDQAFVVRQRETYDEQLKLESL 411 >gi|330962353|gb|EGH62613.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 415 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 193/416 (46%), Positives = 262/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +++A DGM +VC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSGIAERFGTPTYVYSRAHIEAQYRAYADALDGMAHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AE+IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L DL +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP ++DY + + ++ EPGRF+VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + + DIVGPICETGDF+A +R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTAVRPRDSEAR--AYDIVGPICETGDFLAKDRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+GSQ +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESL 412 >gi|118591377|ref|ZP_01548775.1| diaminopimelate decarboxylase [Stappia aggregata IAM 12614] gi|118436049|gb|EAV42692.1| diaminopimelate decarboxylase [Stappia aggregata IAM 12614] Length = 424 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 227/422 (53%), Positives = 301/422 (71%), Gaps = 1/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G L AE+V +E +A V TPFYCYST + ++Y F+ AF + ++VCYA+K Sbjct: 1 MHHFDYKNGELFAEDVPIETIAREVGTPFYCYSTATLTRHYQVFAAAFSDIPSLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTLA LG+G+D+VSEGELRRA AA VPA +IVFSGVGKT E ALQ I Sbjct: 61 ANSNQAVLKTLAQLGAGMDVVSEGELRRARAAGVPASKIVFSGVGKTEAEQAYALQEDIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L++ A +GK A ++ R+NPD++A TH KI+TGK E+KFGIP + Sbjct: 121 CFNVESEPELRQLSRVASEMGKTARVSMRINPDVDAKTHAKIATGKAENKFGIPWQRARD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+K++G+DMHIGSQI ++E F AF L DL LRS GH I H+D+GGGL Sbjct: 181 VYAEAAALPGIKVTGIDMHIGSQITELEPFDNAFARLGDLIADLRSQGHTIDHVDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 ++ PP YA ++ ++ L C ++ EPGR + + GILVT+VI +K ADK Sbjct: 241 GIPYITDNNPPPHPDAYAQVVKKHVRELDCMVMFEPGRMIAGNAGILVTEVIYVKDGADK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLY+AYHE+ + PA + I ADIVGP+CETGDF+A NR + Sbjct: 301 KFVIVDAAMNDLIRPTLYEAYHEVRPVREPAEETDRIKADIVGPVCETGDFLAQNRDMPS 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + G++L + GAYGAVQS TYN+RLL+PE++VN QF +IRPR ++++L+ LD IP W Sbjct: 361 VKAGEMLAVYSAGAYGAVQSCTYNTRLLVPEVLVNADQFAVIRPRTSYEDLLGLDRIPDW 420 Query: 420 LQ 421 L+ Sbjct: 421 LK 422 >gi|256045584|ref|ZP_05448464.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. Rev.1] gi|260562895|ref|ZP_05833381.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|265992008|ref|ZP_06104565.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. Rev.1] gi|260152911|gb|EEW88003.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|263003074|gb|EEZ15367.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. Rev.1] Length = 421 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 233/421 (55%), Positives = 313/421 (74%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G LHAENVSL ++A V TPFY YS IE+++ F +AF MDT+V YALK Sbjct: 1 MNHFEYRNGVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ LA LG+G D VS+GE+RRALAA +PA RIVFSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLTALAKLGAGADTVSQGEIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+ GK AP++ R+NPD++A TH KISTGK E+KFGIP + + Sbjct: 121 CFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ +L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L K + EPGR +V + G+LVT+VI +K+ K Sbjct: 241 GIPYRTDNTPPPPPVAYAQIVAKHIKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+H+I ++ P + I AD VGP+CETGD++ L+R++A Sbjct: 301 NFVIVDAAMNDLIRPTLYDAFHDIRPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ I TGAYGAV S TYNSRLLIPE++ +G ++H++RPR T++EL+ LDS+P W Sbjct: 361 PAPGDLIAICTTGAYGAVLSSTYNSRLLIPEVLGDGERYHVVRPRRTYEELLALDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|312115134|ref|YP_004012730.1| diaminopimelate decarboxylase [Rhodomicrobium vannielii ATCC 17100] gi|311220263|gb|ADP71631.1| diaminopimelate decarboxylase [Rhodomicrobium vannielii ATCC 17100] Length = 422 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 216/422 (51%), Positives = 293/422 (69%), Gaps = 1/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G LHAE +L+ +A V TPFYCYST IE++Y F+ AF G+D +VCYA+K Sbjct: 1 MHHFSYKNGILHAEGAALDAIARDVGTPFYCYSTATIERHYRVFAEAFTGLDALVCYAIK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN +VI+TLA LGSG D+VSEGE+RRALAA +PA++IVFSGVGKT E+ AL +GIY Sbjct: 61 ANSNVSVIRTLAKLGSGADVVSEGEIRRALAAGIPADKIVFSGVGKTEAEMAFALDAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE+EL+ L+Q A G+ A IAFR+NPD++A TH KISTGK E KFG+ + Sbjct: 121 GFNVESEAELRALSQVASGRGRTARIAFRINPDVDAKTHAKISTGKSEHKFGVSWRDARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA A LPG+ ++GV MHIGSQI +E F AF L+ +L + LR +GH I ++++GGGL Sbjct: 181 LYALARDLPGLDVAGVHMHIGSQITHMEPFRDAFDLMANLVEDLRRDGHTISYVNLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 PP SDYA ++ L +++ EPGR +V + GILVT+VI K S +K Sbjct: 241 GIPYRWDQEVPPLPSDYAEIVIGLSNRLGARLLFEPGRIIVGNAGILVTQVIYSKHSGEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D MND +RPTLYDAYH+I + + AD+VGP+CETGDF+A +R + Sbjct: 301 RFVIVDAGMNDLVRPTLYDAYHDIWPVNEAQRNASIGRADVVGPVCETGDFLAKDRDMPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDL+ + GAYGA QS TYN+R L+PE++VNG+ + ++RPR ++++++ + + W Sbjct: 361 LAPGDLIAVMTAGAYGAAQSSTYNTRRLVPEVLVNGADYAVVRPRPSYEDMLRAEPLAGW 420 Query: 420 LQ 421 L+ Sbjct: 421 LR 422 >gi|113968735|ref|YP_732528.1| diaminopimelate decarboxylase [Shewanella sp. MR-4] gi|113883419|gb|ABI37471.1| diaminopimelate decarboxylase [Shewanella sp. MR-4] Length = 414 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 260/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +L+AE + LA TP Y YS +E+++ F+NA +VCYA+K Sbjct: 1 MDHFLYQDNTLYAEGCRVNDLAQQYGTPLYIYSRATLERHWHAFNNAVADHPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT+ E++ AL GIY Sbjct: 61 ANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LNQ A LGK AP++ RVNPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESSAELEQLNQVAGRLGKIAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEV 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A LP +++ GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 VFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP YA+ + G+ + K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTYDDE-TPPHPDVYAAALLARLGDRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ I + D DIVGP+CETGDF+ +R +A Sbjct: 300 FAIVDGAMNDLIRPALYSAWQNIIPV--NPRDEQAQVFDIVGPVCETGDFLGKDRALA-I 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + +GAYG + YN+R E+MV+G + +++R R +L + + + Sbjct: 357 AAGDLLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLAQLWQGEQL 412 >gi|325579300|ref|ZP_08149256.1| diaminopimelate decarboxylase [Haemophilus parainfluenzae ATCC 33392] gi|325159535|gb|EGC71669.1| diaminopimelate decarboxylase [Haemophilus parainfluenzae ATCC 33392] Length = 416 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 260/416 (62%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L+ E++ +++LA TP Y YS +E+++ F +A ++CYA+K Sbjct: 1 MDFFQYKNEQLYVEDLPVKQLAEEFGTPLYIYSRATLERHWHAFDSALGEHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN ++ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ EI AL+ GI Sbjct: 61 ANSNIGILNVMAKLGSGFDIVSQGELERVLAAGGEASKVVFSGVAKSRAEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ + + Sbjct: 121 CFNVESVAELHHINQIAGEMGKVAPISLRVNPDVDAHTHPYISTGLKENKFGVSVDEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+TLP VKI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLATTLPHVKITGMDCHIGSQLTELQPFLDATDRLIRLIEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S A+L+++ +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYAAALLNKLKDYEDLEIILEPGRAITANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I +R D+VGP+CET DF+ R++A Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIIEIDRTL-EREKTIYDVVGPVCETSDFLGKQRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD + GAYGA S YNSR E++V+G + H+IR R EL L+SI Sbjct: 359 AEGDYIAQRSAGAYGASMSSNYNSRPRTAEVLVDGDKAHLIRRRENLSELWALESI 414 >gi|114764059|ref|ZP_01443298.1| diaminopimelate decarboxylase [Pelagibaca bermudensis HTCC2601] gi|114543417|gb|EAU46432.1| diaminopimelate decarboxylase [Roseovarius sp. HTCC2601] Length = 421 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 199/421 (47%), Positives = 281/421 (66%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L AE+V + ++A V TP Y YST + +++ F A +VCYA+K Sbjct: 1 MDHFLYRDGQLCAEDVPVAEIAAAVGTPVYVYSTATLLRHFRLFDEALAWGPHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VS GE RA AA VP +RIVFSGVGKT EI AL+ GI Sbjct: 61 AASNQAILKTLAEAGAGMDVVSGGEYARARAAGVPGDRIVFSGVGKTRAEIRTALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN+ESE E++ +++ A LG AP+ RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNIESEPEMRAISEVASELGVVAPVTVRVNPDVDAKTHAKIATGKSENKFGIPIAKARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+K+ G+D+HIGSQ+ ++E F A++ + +LT+ LR +GH I +D+GGGL Sbjct: 181 VYAEAAALPGLKVVGIDVHIGSQLTELEPFAMAYRKVAELTEALRGDGHEITRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +Y ++I + G+L C+I +EPGR + + GILV++VI +K+ + Sbjct: 241 GIPYTRSNEAPPLPVEYGAMIERELGHLGCEIEIEPGRLIAGNAGILVSEVIYLKEGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +Y+A+H+I ++ P DIVGP+CE+GD A R + Sbjct: 301 NFLILDAAMNDLIRPAMYEAHHDIVPVIEPEAGLEQSPFDIVGPVCESGDTFAKGRMMPA 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV S YN+R LIPE++V G QF +IR R +F+E+I DS+P W Sbjct: 361 LGAGDLVAFRSAGAYGAVMSSEYNTRALIPEVLVKGDQFAVIRRRPSFEEIINRDSLPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|119469651|ref|ZP_01612520.1| putative diaminopimelate decarboxylase [Alteromonadales bacterium TW-7] gi|119446898|gb|EAW28169.1| putative diaminopimelate decarboxylase [Alteromonadales bacterium TW-7] Length = 417 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 190/416 (45%), Positives = 259/416 (62%), Gaps = 1/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE+V + +A TP Y YS E++YL F+NA ++VCYA+K Sbjct: 1 MDFFNYKNNQLFAEDVGIAAIAQQYGTPCYVYSRATFERHYLAFANATKNHKSLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS+GEL R + A A ++VFSGV KT DEI AL+ GI Sbjct: 61 ANSNIAVLNILARLGSGFDIVSKGELARVIKAGGDAGKVVFSGVAKTADEIAYALKLGIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SEL+ +++ A L API+ RVNPDI+A TH ISTG KE+KFGI I S Sbjct: 121 CFNVESASELERISEVACELNLVAPISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVS 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LPG+ + GVD HIGSQ+ +++ F +A L L +L+S G + H+D+GGGL Sbjct: 181 VYQQAAALPGLNVIGVDCHIGSQLTEVKPFLEALDKLLALIDELKSVGIELSHLDIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y ++ P S + + ++I EPGR + A+ G+L+T+V IK++ K Sbjct: 241 GVPYDNEQPPHPSEYAEQVTARLENYRHLELIFEPGRAIAANAGVLITQVEFIKQNQSKF 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP+LY A+ +I + D + DIVGP+CETGDF+ +R++A Sbjct: 301 FAIVDAGMNDMLRPSLYQAWQKIIPVSVRDDDTPTHNFDIVGPVCETGDFLGKDRELA-L 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL GAYG S YNSR + EIMV+G Q H+IR R T + L + + I Sbjct: 360 KQGDLLAQRSAGAYGFTMSSNYNSRPRVAEIMVDGEQHHLIRERETIESLYQGEKI 415 >gi|114049121|ref|YP_739671.1| diaminopimelate decarboxylase [Shewanella sp. MR-7] gi|113890563|gb|ABI44614.1| diaminopimelate decarboxylase [Shewanella sp. MR-7] Length = 414 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 260/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +L+AE + LA TP Y YS +E+++ F+NA +VCYA+K Sbjct: 1 MDHFLYQDNTLYAEGCRVNDLAQQYGTPLYIYSRATLERHWHAFNNAVADHPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT+ E++ AL GIY Sbjct: 61 ANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LNQ A LGK AP++ RVNPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESSAELEQLNQVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEV 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A LP +++ GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 VFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP YA+ + G+ + K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTYDDE-TPPHPDVYAAALLARLGDRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ I + D DIVGP+CETGDF+ +R +A Sbjct: 300 FAIVDGAMNDLIRPALYSAWQNIIPV--NPRDEQAQVFDIVGPVCETGDFLGKDRALA-I 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + +GAYG + YN+R E+MV+G + +++R R +L + + + Sbjct: 357 AAGDLLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLAQLWQGEQL 412 >gi|307546848|ref|YP_003899327.1| diaminopimelate decarboxylase [Halomonas elongata DSM 2581] gi|307218872|emb|CBV44142.1| diaminopimelate decarboxylase [Halomonas elongata DSM 2581] Length = 429 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 175/423 (41%), Positives = 255/423 (60%), Gaps = 8/423 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LH E+V L +A TP Y YS + +++ ++ A G ++CYA+K Sbjct: 1 MDHFDYRDGVLHGEDVDLTSVAEAFGTPCYVYSKATLARHFRAYTEALGGHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N AV+ LA LG+G DIVS GEL R L A ++VFSGV K +E+ AL+ GI Sbjct: 61 ANANLAVLGLLARLGAGFDIVSVGELERVLVAGGDPAKVVFSGVAKQENEMARALEVGIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ L+ A LGK A ++ RVNPD++A TH ISTG K++KFGIP+ + Sbjct: 121 CFNVESRAELERLDAVARGLGKVASVSLRVNPDVDAGTHPYISTGLKDNKFGIPVDEAFE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ + V+++G+D HIGSQ+ ++ F A L L +QLR G ++H+D+GGGL Sbjct: 181 VYRQAAGMDNVRVAGLDCHIGSQLTELSPFLDALDRLLALLEQLRDAGIEVEHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQC----KIILEPGRFLVADVGILVTKVISIKKS 296 G+ Y + PP DYA+ + + ++ EPGR + A+ G+L+T+V +K Sbjct: 241 GVPYQDE-NPPQPFDYATSLLERLSRWPGSERLTLLFEPGRSIAANAGVLLTRVEFLKPG 299 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 K F I+D AMND +RP LY A+ V+ R D+VGP+CETGDF+ R+ Sbjct: 300 ETKNFAIVDAAMNDLIRPALYQAWQ-AILPVDTRQPRETDTYDVVGPVCETGDFLGKQRR 358 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-S 415 +A GDLL + GAYG V + YNSR PE+MV+G + H++R R ++L + + Sbjct: 359 LA-IAAGDLLAVRSAGAYGFVMASNYNSRPRPPEVMVDGDRMHLVRRRERLEDLWAGETT 417 Query: 416 IPA 418 +P Sbjct: 418 LPD 420 >gi|146278482|ref|YP_001168641.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides ATCC 17025] gi|145556723|gb|ABP71336.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides ATCC 17025] Length = 421 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 209/421 (49%), Positives = 285/421 (67%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y GSLHAE V L +A V TPFYCYS +E++Y F+ A + MVC+A+K Sbjct: 1 MDHFLYRNGSLHAEEVPLADIAATVGTPFYCYSAATLERHYRLFTEALTPLPHMVCFAIK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN AV+K L LG+G+D+VS GE RA AA VP ERIVFSGVGKT +E+ LAL+ GI Sbjct: 61 SLSNLAVLKLLGDLGAGMDVVSGGEYLRARAAGVPGERIVFSGVGKTREEMRLALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ L++ A S+ +APIA RVNPD++A TH+KI+TGKKE+KFGIPI + Sbjct: 121 QFNVESEPEMRALSEVAASMDLRAPIAVRVNPDVDARTHEKIATGKKENKFGIPIARASE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+++ G+D+HIGSQ+ +E F +A+ + DLT +LR+ GH I+ +D+GGGL Sbjct: 181 VYAEAAALPGLEVVGIDVHIGSQLTDLEPFEQAYLKVADLTGRLRAEGHEIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +DY +LI + G+L C+I +EPGR + + G+LV++VI +K + Sbjct: 241 GIPYTRSNEAPPLPTDYGALIKRTVGHLGCEIEIEPGRLISGNSGVLVSRVIYVKNGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP++Y A+H+I + A D+VGPICETGD A R + Sbjct: 301 DFLILDAAMNDLVRPSMYGAHHDIVPVAEAAPGTEGQPYDVVGPICETGDTFAKARPLPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR L+PE++V G F +IR R TF E++ DSIP W Sbjct: 361 MSEGDLVAFRSAGAYGAVMASEYNSRPLVPEVLVRGDHFAVIRARPTFDEMLRRDSIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|117918847|ref|YP_868039.1| diaminopimelate decarboxylase [Shewanella sp. ANA-3] gi|117611179|gb|ABK46633.1| diaminopimelate decarboxylase [Shewanella sp. ANA-3] Length = 414 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 259/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +L+AE + LA TP Y YS +E+++ F+NA +VCYA+K Sbjct: 1 MDHFLYQDNTLYAEGCRVNDLAQQYGTPLYIYSRATLERHWHAFNNAVADHPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT+ E++ AL GIY Sbjct: 61 ANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A LGK AP++ RVNPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESSAELEQLNDVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEV 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A LP +++ GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 VFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLADQGIVIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP YA+ + G+ + K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTYDDE-TPPHPDVYAAALLARLGDRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ I + D DIVGP+CETGDF+ +R +A Sbjct: 300 FAIVDGAMNDLIRPALYSAWQNIIPV--NPRDEQAQVFDIVGPVCETGDFLGKDRALA-I 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + +GAYG + YN+R E+MV+G + +++R R +L + + + Sbjct: 357 AAGDLLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLAQLWQGEQL 412 >gi|254475385|ref|ZP_05088771.1| diaminopimelate decarboxylase [Ruegeria sp. R11] gi|214029628|gb|EEB70463.1| diaminopimelate decarboxylase [Ruegeria sp. R11] Length = 421 Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats. Identities = 204/421 (48%), Positives = 286/421 (67%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L AE+V + ++A V TPFY YST + +++ F +A GMD +VCYA+K Sbjct: 1 MDHFLYRDGALFAEDVPVAEIAAAVGTPFYVYSTATLLRHFQLFDDALAGMDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VS+GE RA AA VP ++IVFSGVGKT +EI AL GI Sbjct: 61 AASNQAILKTLAQAGAGMDVVSQGEYLRAKAAGVPGDKIVFSGVGKTAEEIRTALSGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ +N A+ LG API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMEVINAVALDLGVVAPITVRVNPDVDAKTHAKIATGKSENKFGIPIAKARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+TL G+ + G+D+HIGSQ+ ++E F A++ + +LT+ LR++GH+I+ +D+GGGL Sbjct: 181 VYAHAATLKGLDVIGIDVHIGSQLTELEPFRLAYQKVAELTETLRADGHDIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +Y LI G+L +I +EPGR + + G++V+KVI +K+ + Sbjct: 241 GIPYTRSNEAPPLPVEYGQLIKDTLGHLNVEIEIEPGRLIAGNAGLMVSKVIYVKEGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +Y+A+H+I +V P DIVGP+CETGD A R + Sbjct: 301 DFLILDGAMNDLIRPAMYEAHHDIVPVVEPEPGLEPRPYDIVGPVCETGDTFAKARLMPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 DL+ GAYGAV + YNSR LIPE++V+G QF +IR R F E+I D+IP W Sbjct: 361 LSANDLVAFRSAGAYGAVMASEYNSRPLIPEVLVHGDQFAVIRRRPDFDEMINRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|283850737|ref|ZP_06368024.1| diaminopimelate decarboxylase [Desulfovibrio sp. FW1012B] gi|283573980|gb|EFC21953.1| diaminopimelate decarboxylase [Desulfovibrio sp. FW1012B] Length = 412 Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats. Identities = 180/415 (43%), Positives = 261/415 (62%), Gaps = 3/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G L+AE+V + L TP Y YS + +++ F +AF G+ + C+++K Sbjct: 1 MHHFAYRGGELYAEDVPVSTLVAAYGTPLYVYSAATLRRHFTAFDSAFGGLPHLTCFSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN +V+KTLA +G+G+DIVS GEL RALAA V E+IV+SGVGK EI+ AL +GI Sbjct: 61 ANSNLSVLKTLAAMGAGVDIVSGGELYRALAAGVAPEKIVYSGVGKRAAEIEQALTAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ ++ A LGK A ++ R+NPD++ TH ISTG K++KFG+ I + Sbjct: 121 MFNVESLGELERISAIAKRLGKTAQVSLRINPDVDPKTHPYISTGLKKNKFGLDIENSLA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A LP + G+D HIGSQ+ I F +A + ++L + G +++D+GGGL Sbjct: 181 AYAKAMELPNITPVGIDCHIGSQLTSISPFLEALDKILTFREKLCAMGIVPRYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP ++ + + G+L +ILEPGR +V + GILVT+V+ KK+ K Sbjct: 241 GIQYDEE-DPPHPKEFGEALTKALGDLPMTLILEPGRVIVGNAGILVTEVVYTKKTPSKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D AMND +RP+LYD++H I + R ++ D+VGPICE+GDF+A +R + Sbjct: 300 FVIVDAAMNDLIRPSLYDSFHAIREVR--PAGRETLNVDVVGPICESGDFLARDRDLPAV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PG+LL + GAYG S YNSR E++V+G + R R T+++LI L+ Sbjct: 358 APGELLAVYSAGAYGFTMSSNYNSRPRAAEVLVDGETVTVARRRETYEDLIALER 412 >gi|198284947|ref|YP_002221268.1| diaminopimelate decarboxylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666233|ref|YP_002427632.1| diaminopimelate decarboxylase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249468|gb|ACH85061.1| diaminopimelate decarboxylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518446|gb|ACK79032.1| diaminopimelate decarboxylase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 419 Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats. Identities = 180/424 (42%), Positives = 265/424 (62%), Gaps = 6/424 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y + +L+ E++ L+++A TP Y YS A+ + Y +FS A G +T VCYA+K Sbjct: 1 MNTFHYRDHALYGEDLPLQEIAAHYGTPCYVYSEAALRERYHSFSAAL-GDNTRVCYAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN +++ A +G+G DIVS GEL R L A A IVFSGVGK+ EI AL +GI+ Sbjct: 60 ANSNLGILRIFAEMGAGFDIVSGGELERVLRAGGDAGTIVFSGVGKSSVEIRAALGAGIF 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVES +EL + A +GK+AP+A RVNPD++ TH+ I+TG KE KFGIP+ Q Sbjct: 120 CLNVESAAELWRIADIAADMGKRAPVALRVNPDVDPGTHRYIATGLKESKFGIPMDQARH 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY A+ P +++ G+ HIGSQ+ + +A +R L +L ++G +QH+D+GGG+ Sbjct: 180 LYLQAAQHPALELKGIACHIGSQLLDLTPLGEAAGRVRALYDELAAHGIALQHLDLGGGV 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI YH + PS +DYA + Q + + ++E GR L + G+L+TKV +K + K Sbjct: 240 GIRYHDEIP-PSPADYAWTLDQALQGVAVRRVVELGRALAGNAGVLLTKVEYLKDNGGKQ 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP LY A+H+I + G + D+VGP+CE+GDF+A +R +A Sbjct: 299 FCVVDAAMNDLLRPALYGAWHDILPLHQSVGTGPAM--DVVGPVCESGDFLARDRPLA-A 355 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 + GDLL + GAYG S YNSR PE++++G Q +IR R T + + L+ P Sbjct: 356 KAGDLLAVMSAGAYGFAMSSNYNSRPRPPEVLISGHQHRLIRRRETLADQLSLEENPPS- 414 Query: 421 QKTP 424 +K+P Sbjct: 415 RKSP 418 >gi|86747955|ref|YP_484451.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris HaA2] gi|86570983|gb|ABD05540.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris HaA2] Length = 421 Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats. Identities = 223/421 (52%), Positives = 291/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE V LE LA V TPFYCYST +E++Y FS AF G D +VCYA+K Sbjct: 1 MRHFDYRDGVLHAEGVGLEVLAREVGTPFYCYSTATLERHYRVFSEAFAGTDALVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++TLA LG+G D+VS GEL+RALAA +PA +IVFSGVGKT E+ AL I Sbjct: 61 ANSNQSVLRTLARLGAGADVVSGGELQRALAAGIPASKIVFSGVGKTEAELRAALAHDIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVESE EL+ L++ AV G+ A I+ RVNPD+++ TH KISTGK E+KFGIP+ Sbjct: 121 CLNVESEPELELLSRLAVETGRTARISIRVNPDVDSGTHAKISTGKSENKFGIPLVHARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+ ISGVD+HIGSQI + AF+L+ + QLR +GH I H+D GGGL Sbjct: 181 VYARAAKLPGILISGVDVHIGSQIIDLAPMEAAFRLVAEFVHQLRGDGHTISHVDFGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 Y PP YA ++ + NL C ++ EPGR +V + GILV +VI +K K Sbjct: 241 GIPYYEDRDAPPEPFAYAQMVKRVTHNLGCALLFEPGRMIVGNAGILVARVIYVKHGDGK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYHEI + PA I AD+VGP+CETGD++AL+R++ Sbjct: 301 TFVIIDAAMNDLIRPTLYEAYHEILPVAAPAPGAKLITADVVGPVCETGDYLALDRQLPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ I GAYGAVQ+ TYN+R L+PE++V Q+ ++RPR+ ++LI LD W Sbjct: 361 LKSGDLIAIMTAGAYGAVQACTYNTRALVPEVLVKDDQYAVVRPRIEVEQLIALDRPAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|320102687|ref|YP_004178278.1| diaminopimelate decarboxylase [Isosphaera pallida ATCC 43644] gi|319749969|gb|ADV61729.1| diaminopimelate decarboxylase [Isosphaera pallida ATCC 43644] Length = 472 Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats. Identities = 169/426 (39%), Positives = 243/426 (57%), Gaps = 15/426 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F+Y +G+L+ E V+ LA TP Y YS A + F D ++CY++KAN Sbjct: 6 FFEYRDGTLYCEGVAARDLAARFGTPLYVYSRAAFLAALEELQSVFAEFDPVICYSVKAN 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN +V+K LA GSG D+VS GELRR A R VF+GVGKT +EI AL+SG+ F Sbjct: 66 SNLSVLKMLAAHGSGFDVVSSGELRRVEEAGGDPGRTVFAGVGKTDEEIAHALKSGVLMF 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL +++ + G +AP+A RVNPD++ TH+ ISTG KE KFG+ I + L Sbjct: 126 NVESEAELDAIDRVSREHGLQAPVAPRVNPDVDPQTHRYISTGHKESKFGMDITRALRLT 185 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A + G+K+ G+ MHIGSQI + + + A DL +R GH IQ +++GGG GI Sbjct: 186 ERARDMAGIKVVGLHMHIGSQITKTQPYADAAAKAADLVATMRGQGHAIQWLNLGGGFGI 245 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y P + YA+++ C++ LEPGR + + G+L+++VI K S DK F+ Sbjct: 246 DYRGGEAQP-ITAYAAVMAPAIRASGCRLALEPGRRVAGNAGVLLSRVIFTKVSGDKRFL 304 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH-------------ADIVGPICETGD 349 I D AMND +RP+LY + V + I D+VGP+CE+GD Sbjct: 305 IQDAAMNDLLRPSLYQ-AFHKIWPVEASMQPPDIPAGHDGSQPGASDAWDVVGPVCESGD 363 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 F+A +R + GDLL + GAYG V + YN+R E++V G+ +IR R T+ + Sbjct: 364 FLAKDRPLPPLERGDLLAVFSAGAYGMVMASNYNTRPRPAEVLVEGNHARLIRRRETYDD 423 Query: 410 LIELDS 415 L+ + Sbjct: 424 LVAAER 429 >gi|39995269|ref|NP_951220.1| diaminopimelate decarboxylase [Geobacter sulfurreducens PCA] gi|39982031|gb|AAR33493.1| diaminopimelate decarboxylase [Geobacter sulfurreducens PCA] gi|298504274|gb|ADI82997.1| diaminopimelate decarboxylase [Geobacter sulfurreducens KN400] Length = 417 Score = 322 bits (826), Expect = 6e-86, Method: Composition-based stats. Identities = 187/420 (44%), Positives = 264/420 (62%), Gaps = 3/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y LHAE VSL+++ V +P Y YS + +++ F AF G+ +CY++K Sbjct: 1 MNHFQYKGNELHAEEVSLKEIVARVGSPVYVYSHATLTRHFTAFDEAFAGVPHTICYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANS QAV++T LG G DIVS GEL RAL A V +++V+SGVGK DEI+ AL +GI Sbjct: 61 ANSTQAVLRTFITLGGGADIVSGGELYRALQAGVDPKKVVYSGVGKKDDEIEYALNTGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE EL +++ A +GKKA IA RVNPD++ TH I+TG K KFGI I + + Sbjct: 121 MFNVESEQELTRISEIASRMGKKAGIAIRVNPDVDPQTHPYITTGLKNAKFGITIDRAMA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A TLPG+ + G+DMHIGSQ+ ++ F + + L+ + LR G ++Q+ D GGGL Sbjct: 181 EYARAKTLPGIDVIGIDMHIGSQLTKVTPFVDSIEKLKTMIANLRGQGIDLQYFDCGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y S PP +DY I L ++ EPGR +V + GILV + K+ +K Sbjct: 241 GIQY-STEEPPLPADYGKEIVAATKELGMHLLFEPGRNIVGNAGILVATCLFTKERDEKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+++D MND RP LY ++H + +V I ADIVGPICE+GDF+ +R++ + Sbjct: 300 FIMIDAGMNDLARPALYGSFHGVQPVVKDQDG--MIVADIVGPICESGDFLVKDREVPMF 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 R GDL+ GAYG S TYNSR + E+MV G+QF ++R R T ++LI + +P++L Sbjct: 358 RQGDLMAFMSAGAYGFAMSSTYNSRPRVAEVMVKGNQFEVVRERETVEDLIRGERVPSFL 417 >gi|110678901|ref|YP_681908.1| diaminopimelate decarboxylase [Roseobacter denitrificans OCh 114] gi|109455017|gb|ABG31222.1| diaminopimelate decarboxylase [Roseobacter denitrificans OCh 114] Length = 421 Score = 322 bits (825), Expect = 6e-86, Method: Composition-based stats. Identities = 214/421 (50%), Positives = 295/421 (70%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+VS+ ++A V TPFY YST + +++ F A DGMD +VCYA+K Sbjct: 1 MDHFLYRDGVLHAEDVSVPEIAAAVGTPFYLYSTATLLRHFRLFDEALDGMDHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VS GE RA AA VP ++IVFSGVGKT EI LAL+ GI Sbjct: 61 AASNQAILKTLAQAGAGMDVVSGGEYLRAKAAGVPGDKIVFSGVGKTAAEIRLALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ LN A+ +G API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMEVLNAAALEMGVTAPITIRVNPDVDAKTHAKIATGKSENKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+++ G+++ G+D+HIGSQ+ ++ F A+ + +LT+QLR+ GHNI+ +D+GGGL Sbjct: 181 VYALAASMKGLEVIGIDVHIGSQLTELAPFEAAYDKVAELTEQLRAEGHNIRRLDLGGGL 240 Query: 241 GIAY-HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y + PP SDY ++I + G+L C+I +EPGR +V + GI+V++VI +K D+ Sbjct: 241 GIPYARDNQAPPLPSDYGAMIKRKLGHLGCEIEIEPGRLIVGNAGIMVSEVIYVKSGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RP +Y+AYH+I +V P + DIVGP+CETGD A R + Sbjct: 301 DFLIIDGAMNDLIRPAMYEAYHDIIPVVEPDPGVEQVKFDIVGPVCETGDTFARARIMPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 G+ + GAYGAV S YNSR LIPE++V+ QF +IRPR TF E+I+ D+IP W Sbjct: 361 VAAGERVAFRSAGAYGAVMSSEYNSRPLIPEVLVHEDQFAVIRPRPTFDEMIKRDTIPTW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|114330425|ref|YP_746647.1| diaminopimelate decarboxylase [Nitrosomonas eutropha C91] gi|114307439|gb|ABI58682.1| diaminopimelate decarboxylase [Nitrosomonas eutropha C91] Length = 417 Score = 322 bits (825), Expect = 6e-86, Method: Composition-based stats. Identities = 191/420 (45%), Positives = 262/420 (62%), Gaps = 7/420 (1%) Query: 1 MSAF---KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY 57 MS F Y L AE + L +A TP Y YS+ AI Y +F AF + ++CY Sbjct: 1 MSHFSSFNYRNHQLFAEEIPLTAIAAEFGTPCYVYSSAAIRTAYQSFDRAFGQRNHLICY 60 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+KANSN AV+ LA LGSG DIVS GEL+R L A ++ VFSGVGKT +EI +AL + Sbjct: 61 AVKANSNLAVLNLLARLGSGFDIVSGGELQRVLKAGGDLQKTVFSGVGKTFEEIRIALAA 120 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 I+CFNVESE EL LN+ A +GK AP++ RVNPD++ANTH ISTG KE+KFGIP + Sbjct: 121 NIFCFNVESEMELIALNEIAGQMGKIAPVSLRVNPDVDANTHPYISTGMKENKFGIPAAE 180 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 +YA A LP +++SG+D HIGSQ+ +I F +A + DL +L++ G +I+H+D+G Sbjct: 181 AERIYAIAQQLPYIRVSGLDCHIGSQLTEIAPFIEAAHKMLDLLARLQATGISIEHLDLG 240 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GGLG+ Y PP+ +Y + N ++++EPGR +V + G+L+T+V +K + Sbjct: 241 GGLGVRY-DLEIPPTIEEYVKALCAATENYPQQLLIEPGRSMVGNAGLLLTRVHYLKHAP 299 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + F I+D AMND +RP LY AYH I I G+ IVGP+CETGDF+ +R + Sbjct: 300 HRNFAIVDAAMNDMLRPALYQAYHSILPIAKRTGE--TKIYQIVGPVCETGDFLGHDRNL 357 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 DLL + GAYG S YN+R E+MV+GS H+IR R T ++L L+ IP Sbjct: 358 -TLESNDLLAVMSAGAYGMSMSSNYNTRPRAVEVMVDGSSVHLIRARETIEDLYALEKIP 416 >gi|152985290|ref|YP_001351336.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PA7] gi|150960448|gb|ABR82473.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PA7] Length = 415 Score = 322 bits (824), Expect = 9e-86, Method: Composition-based stats. Identities = 188/416 (45%), Positives = 260/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L AE V+L ++A TP Y YS IE Y +++A GM +VC+A+K Sbjct: 1 MDTFSYRDGELFAEGVALSRIAERFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA ++VFSGVGK+ D++ ALQ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKSRDDMRRALQVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A LG KAP++ RVNPD++A TH ISTG KE+KFGI I + + Sbjct: 121 CFNVESSEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ L +++ GVD HIGSQ+ Q+ F A + L L +L + G I+H+D+GGGL Sbjct: 181 IYARAAELDHLEVIGVDCHIGSQLTQLAPFLDALERLLGLVDRLAARGIAIRHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP + DY I + ++ EPGR +VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-QPPLAGDYIRAIRERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLKHTGHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ + D D+VGPICETGDF+A +R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMD--VQAVRPRDAAPRRYDLVGPICETGDFLAKDRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL I GAYG V S YN+R E++V+G + H +R R T EL +S+ Sbjct: 357 AEGDLLAIRSAGAYGFVMSSNYNTRGRAAEVLVDGERAHEVRRRETVPELYAGESL 412 >gi|222054228|ref|YP_002536590.1| diaminopimelate decarboxylase [Geobacter sp. FRC-32] gi|221563517|gb|ACM19489.1| diaminopimelate decarboxylase [Geobacter sp. FRC-32] Length = 417 Score = 322 bits (824), Expect = 9e-86, Method: Composition-based stats. Identities = 182/420 (43%), Positives = 268/420 (63%), Gaps = 3/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L+AE+V+++ + + +PFY YS +E+++ AF + +CY++K Sbjct: 1 MHHFQYKGHDLYAEDVAIKDIVAKIGSPFYVYSQATLERHFRAMDEAFATVSHTICYSMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+K +LG G+DIVS GEL RAL A ++V+SGVGK DEI+ AL +GI Sbjct: 61 ANSNLAVVKNFVNLGGGVDIVSGGELYRALKAGASPSKVVYSGVGKKDDEIEYALNTGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE EL +++ A +G+KA IA RVNPD++ TH I+TG K KFGI I + Sbjct: 121 MFNVESEQELTRISEIANRMGRKAGIAIRVNPDVDPQTHPYITTGLKNAKFGITIDRAIE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A LPG++I G+D HIGSQ+ ++ F A K L+++ +L+ G ++ + D+GGGL Sbjct: 181 EYRRAKGLPGIEILGIDCHIGSQLTKVSPFVDAIKKLKNVIGKLKEMGISLTYFDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ + PP +DY S I + +L +I EPGR LV + GILV K + IK +K Sbjct: 241 GIQYNDE-APPLPADYGSEIIKETKDLGMHLIFEPGRNLVGNAGILVAKTLYIKHRDEKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+++D MND RP LY ++H I +V I ADIVGPICE+GDF+A +R++ + Sbjct: 300 FIVIDAGMNDLARPALYGSFHGIKPVVKNQDG--TITADIVGPICESGDFLAKDREVPMF 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 + GDL+ GAYG S +YNSR + E+MV G++F +IR R T ++L++ + +P++L Sbjct: 358 KQGDLMAFMSAGAYGFAMSSSYNSRPRVAEVMVKGNKFEVIRERETVEDLMKGEKVPSFL 417 >gi|330878499|gb|EGH12648.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 415 Score = 322 bits (824), Expect = 9e-86, Method: Composition-based stats. Identities = 195/416 (46%), Positives = 259/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y F++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAFADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AERIVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAERIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQEVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L DL +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP + DY + + ++ EPGRF+VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-VPPLAGDYIKAVRERLAGRDLGLLFEPGRFIVANAGVLLTQVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTAVR--PRDSEPRAYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G+Q +R R T EL +S+ Sbjct: 357 AEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGTQAFEVRRRETVAELFTGESL 412 >gi|126734685|ref|ZP_01750431.1| diaminopimelate decarboxylase [Roseobacter sp. CCS2] gi|126715240|gb|EBA12105.1| diaminopimelate decarboxylase [Roseobacter sp. CCS2] Length = 422 Score = 322 bits (824), Expect = 9e-86, Method: Composition-based stats. Identities = 206/421 (48%), Positives = 294/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +L+AE+V + ++A V TPFY YST +++++ F A D D +VC+A+K Sbjct: 1 MDHFLYRDSALYAEDVPVAEIAAAVGTPFYVYSTATLKRHFTLFDEALDWGDHLVCFAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SNQAVIK L + G+G+D+VS GE RA AA VP +RIVFSGVGKT DE+ LA++ GI Sbjct: 61 SLSNQAVIKLLGNAGAGMDVVSGGEYLRAKAAGVPGDRIVFSGVGKTADEMRLAIEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ L++ A SL PI RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMIVLDRVAQSLDAVVPITIRVNPDVDAKTHAKIATGKSENKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A +PG+K+ G+D+HIGSQ+ ++ F A+ + +LT+QLR++GH I+ +D+GGGL Sbjct: 181 VYAMAGAMPGLKVVGIDVHIGSQLTELAPFEAAYNKVAELTEQLRADGHEIKRLDLGGGL 240 Query: 241 GIAY-HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y S+ PP +DY +LI + G+L C+I +EPGR + + G++V+KVI +K D+ Sbjct: 241 GIPYARSNEAPPLPTDYGALIQRTVGHLGCEIEIEPGRLISGNAGLMVSKVIYVKSGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +Y+A+H+I +V PA + DIVGP+CE+GD A R++ Sbjct: 301 EFLILDGAMNDLIRPAMYEAWHDIVPVVEPAPGAVPAKYDIVGPVCESGDTFAKGREMPA 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + DL+ GAYGAV S YNSR +IPE++V+G QF +IRPR T++E+I D++P W Sbjct: 361 VKADDLVAFRSAGAYGAVMSSEYNSRPMIPEVLVDGDQFAVIRPRPTYEEMIARDTLPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|27376494|ref|NP_768023.1| diaminopimelate decarboxylase [Bradyrhizobium japonicum USDA 110] gi|27349634|dbj|BAC46648.1| diaminopimelate decarboxylase [Bradyrhizobium japonicum USDA 110] Length = 421 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 219/421 (52%), Positives = 300/421 (71%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y G LHAE V+L +LA V TPFYCYST +E++Y F++AF G +VCYA+K Sbjct: 1 MNHFDYRNGVLHAEAVNLSELAATVGTPFYCYSTATLERHYRVFADAFAGEKVLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++TLA LG+G D+VS GEL+RALAA +PA +I+FSGVGKT DE+ AL + I Sbjct: 61 ANSNQSVLRTLARLGAGADVVSGGELKRALAAGIPARKILFSGVGKTEDELRAALAADIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVESE EL+ L++ A +GK A I+ RVNPD++A TH KISTGK E+KFGIPI Sbjct: 121 CLNVESEPELELLSRLATEMGKTARISVRVNPDVDAGTHAKISTGKSENKFGIPIAHARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG++++G D+HIGSQI + AF++L + Q LR++GH+I H+D GGGL Sbjct: 181 VYARAAKLPGIQVTGTDVHIGSQITDLSKMETAFRILSEFVQTLRADGHDISHVDFGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 Y PP+ YA+++ + NL C ++ EPGR +V + GILV KVI +K K Sbjct: 241 GIPYYMDREAPPAPDAYAAMVKRVSHNLGCTLMFEPGRMIVGNAGILVAKVIYVKHGDGK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLY+A+H+I + PA D + AD+VGP+CETGD++AL+R + Sbjct: 301 NFVIIDAAMNDLIRPTLYEAHHDILPVTQPARDAATMVADVVGPVCETGDYLALDRTLPT 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+ GDLL I GAYGAVQ+GTYN+R L+PE++V Q+ ++RPR+ ++LI +D+ W Sbjct: 361 PKAGDLLAIMTAGAYGAVQAGTYNTRPLVPEVLVKDDQYAVVRPRIDVEQLIAMDTPAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|154252052|ref|YP_001412876.1| diaminopimelate decarboxylase [Parvibaculum lavamentivorans DS-1] gi|154156002|gb|ABS63219.1| diaminopimelate decarboxylase [Parvibaculum lavamentivorans DS-1] Length = 422 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 212/422 (50%), Positives = 295/422 (69%), Gaps = 1/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y +G LHAE+V++ +A + TPFYCYS+ +E++Y F+ AF G VCY++K Sbjct: 1 MHHFEYRDGVLHAEDVAISDIAAAIGTPFYCYSSATLERHYEVFAGAFKGQPARVCYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AVI TLA LG+G D+VSEGELRRALAA +PAE+IVFSGVGKT E+ AL++GI Sbjct: 61 ANSNLAVIATLARLGAGADVVSEGELRRALAAGIPAEKIVFSGVGKTEAEMAFALETGID 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE EL+ L + A + G A +A RVNPD++A TH+KI+TGK E+KFGI + + Sbjct: 121 QFNVESEPELELLAELAAARGLTAQVAIRVNPDVDAKTHEKIATGKAENKFGISWKRAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A L GVK G+D+HIGSQ+ +E F AF+ + + + LR+ GH I HID+GGGL Sbjct: 181 VYARARELKGVKACGIDVHIGSQLTALEPFAAAFERVAGMVEALRAEGHEITHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSD-YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ P D YA+++ + G+L C++ EPGR + + GILV++VI K+ D+ Sbjct: 241 GIPYRGDNDVPPHPDEYAAMVKRTIGHLGCELTFEPGRLIAGNAGILVSRVIYEKQGDDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RPTLYDA+H+I + PA + D+VGP+CETGDF A R++ Sbjct: 301 AFLIVDAAMNDLIRPTLYDAFHDIRPVTEPAEGAARVSYDVVGPVCETGDFFAKARELPR 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ I GAY AVQ+ TYN+R L+PE+MV G+ F +R R ++ +++ D IP+W Sbjct: 361 LKSGDLVAIMSAGAYSAVQASTYNTRPLVPEVMVKGATFQEVRARPSYDAMLKQDIIPSW 420 Query: 420 LQ 421 L+ Sbjct: 421 LE 422 >gi|326796187|ref|YP_004314007.1| diaminopimelate decarboxylase [Marinomonas mediterranea MMB-1] gi|326546951|gb|ADZ92171.1| diaminopimelate decarboxylase [Marinomonas mediterranea MMB-1] Length = 417 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 179/416 (43%), Positives = 250/416 (60%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +L AENVSLE +A TP Y YS E++Y +++AF T+VCYA+K Sbjct: 1 MDFFNYTDQTLFAENVSLETVAEQFGTPTYVYSRATFERHYNAYADAFASHPTLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SN A++ LA LG+G DIVS GEL R + A +++FSG+GK E+ AL+ GI+ Sbjct: 61 ACSNIAILNVLAKLGAGFDIVSIGELERVVRAGGDPSKVMFSGLGKQEHEMRRALELGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL LN+ A LG KAP++ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESEPELYRLNKVAGELGVKAPVSMRVNPDVDAKTHPYISTGLKENKFGIDIKDAPR 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ + + + GVD HIGSQ+ +++ F F L L +L G I+H+D+GGGL Sbjct: 181 IYQVANEMAHLNVMGVDCHIGSQLTELKPFLDTFDRLITLIDELAGLGIEIKHMDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP +DYA LI + EPGR + A+ G+L+TKV +K + K Sbjct: 241 GVRYRDE-VPPEPADYAQLILDKMKGRDISLAFEPGRSIAANAGLLLTKVEFLKCTEHKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP+LY A+ I + A D+VGP+CETGDF+ +R++ Sbjct: 300 FAVIDGAMNDLIRPSLYSAWMNIVPVNLEATSEGKRIYDLVGPVCETGDFLGKDREL-DI 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL + GAYG + YNSR E+MV+G H+IR R + + + Sbjct: 359 QAGDLLAVRSAGAYGFTMASNYNSRNRAAEVMVDGDVAHLIREREDIDHQLAGEQL 414 >gi|91975418|ref|YP_568077.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisB5] gi|91681874|gb|ABE38176.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisB5] Length = 421 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 214/421 (50%), Positives = 290/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+VSL +A V TPFYCYST +E++Y F+ A G+D +VCYA+K Sbjct: 1 MRHFDYRDGVLHAEDVSLASIAQAVGTPFYCYSTATLERHYRVFTEALSGVDALVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++TLA LG+G D+VS GEL+RALAA +P +IVFSGVGKT E+ AL I Sbjct: 61 ANSNQSVLRTLAKLGAGADVVSGGELKRALAAGIPPGKIVFSGVGKTEAELRAALAHDIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVESE EL+ L++ AV G+ A I+ RVNPD+++ TH KISTGK E+KFGIPI Sbjct: 121 CLNVESEPELELLSRLAVETGRIARISIRVNPDVDSGTHAKISTGKSENKFGIPIRHARD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG++++GVD+HIGSQI + AF+L+ + LR +GH I H+D GGGL Sbjct: 181 VYARAAKLPGIQVTGVDVHIGSQIIDLAPMESAFRLVAEFVHVLRGDGHTISHVDFGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 Y PP YA ++ + NL C ++ EPGR +V + GILV +VI +K K Sbjct: 241 GIPYYEDRAAPPEPFSYAEMVKRITHNLGCTLMFEPGRTIVGNAGILVAQVIYVKHGDGK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFV++D AMND +RPTLY+AYHEI + PA I D+VGP+CETGD++AL+R++ Sbjct: 301 TFVVIDAAMNDLIRPTLYEAYHEILPVAEPAPGVKMITGDVVGPVCETGDYLALDRQLPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ I GAYGAVQ+ TYN+R L+PE++V Q+ ++RPR+ ++LI +D W Sbjct: 361 LKSGDLIAIMTAGAYGAVQACTYNTRALVPEVLVKDDQYAVVRPRIEVEQLIAMDQPAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|144899443|emb|CAM76307.1| Diaminopimelate decarboxylase [Magnetospirillum gryphiswaldense MSR-1] Length = 421 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 212/422 (50%), Positives = 285/422 (67%), Gaps = 3/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ F Y G L AE V + ++A V TPFYCYST + ++Y F+ A G+D VC+A Sbjct: 1 MNHFDYVNGQLQAEQVPVAEIAAQVGTPFYCYSTATLVRHYTVFTQALAEAGLDAQVCFA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 LKAN N AV++T A LG+G D+VSEGELRRALAA VP +RIVFSGVGKT E+ A+ G Sbjct: 61 LKANPNVAVVRTFAQLGAGADVVSEGELRRALAAGVPVDRIVFSGVGKTEAELTFAVAKG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I NVESE EL+ L++ A + G + PIA RVNPD++A TH KI+TGKKE+KFGI + Sbjct: 121 IMQINVESEPELEALSKIAAARGIRMPIALRVNPDVDAGTHAKITTGKKENKFGIEWTRA 180 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 H +Y A LPG+++ G+ HIGSQ+ +E F +AF +RDL LR++G NI+ +D+GG Sbjct: 181 HEVYNKARALPGIEVVGIACHIGSQLTDVEPFRQAFLRVRDLVAMLRADGFNIRRLDLGG 240 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 GLGI Y PP + YA I G+L CKI+LEPGR LV + GILV++V+ +K+ A Sbjct: 241 GLGIPY-ESEEPPHPAVYAKAIKDTLGDLGCKIVLEPGRLLVGNAGILVSRVVYVKEGAT 299 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 +TF+I D AMND MRP LY+A+H I ++ PA D + D+VGP+CETGD A R + Sbjct: 300 RTFLIADAAMNDLMRPALYEAHHTIEPVIEPAKDAPRLPVDVVGPVCETGDTFAKQRSLP 359 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 + GDL+ GAYGA S TYN+R L+PE++V F ++R R +F +++ LDS+P Sbjct: 360 PIKAGDLIVFRTAGAYGAAMSSTYNTRPLVPEVLVKDDSFAVVRARPSFDDMLALDSVPD 419 Query: 419 WL 420 WL Sbjct: 420 WL 421 >gi|255263324|ref|ZP_05342666.1| diaminopimelate decarboxylase [Thalassiobium sp. R2A62] gi|255105659|gb|EET48333.1| diaminopimelate decarboxylase [Thalassiobium sp. R2A62] Length = 422 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 194/422 (45%), Positives = 277/422 (65%), Gaps = 2/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L AE+V + +A V TPFY YS + +++ F +A G+D +VC+A+K Sbjct: 1 MDHFLYRDGALFAEDVPVADIAASVGTPFYLYSAATLLRHFQLFDDALAGVDHLVCFAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SNQA++K L G+G+D+VS GE RA AA + +IVFSG+GKT E+++AL GI Sbjct: 61 SASNQAILKLLGDAGAGMDVVSGGEYARARAAGISGNKIVFSGIGKTRAEMEMALTGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ L+ A LG API RVNPD++A TH+KI+TG+K DKFGIPI + Sbjct: 121 QFNVESEPEMLALSAVATDLGVVAPITVRVNPDVDAKTHEKIATGRKGDKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG- 239 +YA A+ LP +K+ G+D+HIGSQ+ + F A++ + DLT+ LR++GH I +D+GGG Sbjct: 181 IYAVAAKLPSLKVIGIDVHIGSQLTDLAPFKTAYEKVADLTEHLRADGHEISRLDLGGGL 240 Query: 240 -LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + A + RPP + Y +I G+L C+I +EPGR + + GILV+++I IK D Sbjct: 241 GIPYAIGDNDRPPLPAQYGEMIIDTLGHLGCEIEIEPGRLISGNAGILVSQIIYIKSGED 300 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + F+ILD AMND +RP +Y A+H+I ++ P DIVGP+CE+GD A R + Sbjct: 301 REFMILDGAMNDLIRPAMYGAHHDIIPVIEPPAGVDKTPYDIVGPVCESGDTFAKARDMP 360 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 GDL+ GAYGAV S YN+R LIPE++V G QF +IRPR T+ ++I D++P Sbjct: 361 PMNAGDLVAFRSAGAYGAVMSSEYNTRPLIPEVLVMGDQFAVIRPRPTYDDIINRDTVPE 420 Query: 419 WL 420 WL Sbjct: 421 WL 422 >gi|328541749|ref|YP_004301858.1| diaminopimelate decarboxylase [polymorphum gilvum SL003B-26A1] gi|326411501|gb|ADZ68564.1| Diaminopimelate decarboxylase [Polymorphum gilvum SL003B-26A1] Length = 424 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 229/424 (54%), Positives = 308/424 (72%), Gaps = 1/424 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L AE+V + +A V TPFYCYST + ++Y FS+AF+G+ ++VCYA+K Sbjct: 1 MHHFDYRDGALFAEDVPVAAIAEAVGTPFYCYSTATLTRHYEVFSSAFEGIPSLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ TLA LG+G+D+VSEGELRRA AA VPA+RI+FSGVGKT E LA+ I Sbjct: 61 ANSNQAVLATLARLGAGMDVVSEGELRRARAAGVPADRIMFSGVGKTEAEQALAIDEDIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL L++ A G+ A ++ R+NPD++A THKKISTGK E+KFGIP + + Sbjct: 121 CFNVESEPELVQLSRVATEKGRTARVSLRINPDVDARTHKKISTGKAENKFGIPWQRARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA A LPG++++G+DMHIGSQI ++E F AF L DL + LR +GH+I+HID+GGGL Sbjct: 181 LYAEAGELPGIEVTGLDMHIGSQITELEPFDAAFARLGDLVRDLRGDGHHIEHIDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP +YA+++ ++ L C+II EPGR + + GILVT+VI +K+ DK Sbjct: 241 GIPYVTDNAPPPHPVEYAAVVKKHVDKLGCRIIFEPGRLIAGNAGILVTRVIYVKEGHDK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLYDAYHE+ + D I AD+VGP+CETGDF+A +R I Sbjct: 301 TFVIVDAAMNDLIRPTLYDAYHEVRPVRAAPADARRIRADVVGPVCETGDFLAHDRDIPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GD+L + GAYGAVQ+GTYNSRLLIPE++VN +F ++RPR ++ +LI LD +P+W Sbjct: 361 VGQGDMLAVFSAGAYGAVQAGTYNSRLLIPEVLVNEGEFAVVRPRPSYDDLIGLDRLPSW 420 Query: 420 LQKT 423 L + Sbjct: 421 LAEA 424 >gi|75674910|ref|YP_317331.1| diaminopimelate decarboxylase [Nitrobacter winogradskyi Nb-255] gi|74419780|gb|ABA03979.1| diaminopimelate decarboxylase [Nitrobacter winogradskyi Nb-255] Length = 421 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 216/421 (51%), Positives = 293/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+V L LA V TPFYCYST +E++Y F+ AF G D ++CYA+K Sbjct: 1 MHHFDYRDGVLHAEDVDLSTLAEAVGTPFYCYSTATLERHYRVFAEAFAGTDHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++T+A LG+G D+VS GEL+RALAA +PA +I+FSGVGKT E+ AL + + Sbjct: 61 ANSNQSVLRTMARLGAGADVVSGGELKRALAANIPASKILFSGVGKTESELRAALAADVL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVESE EL L++ AV G+ A I+ RVNPD+++ TH KISTG+ E+KFGIPI Q + Sbjct: 121 CINVESEPELDLLSRVAVETGRTARISVRVNPDVDSGTHAKISTGRLENKFGIPITQARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+K++G DMHIGSQI + AF+LL D LR++GH I H+D GGGL Sbjct: 181 VYARAAKLPGIKVTGADMHIGSQITDLGPMETAFRLLADFVGTLRADGHVISHVDFGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 Y PP YA ++ + +L C ++ EPGR +V + G+LVT+VI +K + Sbjct: 241 GIPYYEDRSAPPEPLAYAEMVRRVTRDLDCTLMFEPGRMIVGNAGVLVTRVIYVKHGNAR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLY+AYH+I + D + AD+VGP+CETGD++AL R + Sbjct: 301 NFVIIDAAMNDLIRPTLYEAYHQIMPVRAAPRDAAVMVADVVGPVCETGDYLALGRNLPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+ GDLL I GAYGAVQSGTYN+R L+PE++V G+Q+ +RPR+ +LI +D + W Sbjct: 361 PQAGDLLAIMTAGAYGAVQSGTYNTRALVPEVLVRGNQYATVRPRIEVDQLIAMDKLAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|301155478|emb|CBW14944.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus parainfluenzae T3T1] Length = 416 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 261/416 (62%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L+ E++ +++LA TP Y YS +E+++ F +A ++CYA+K Sbjct: 1 MDFFQYKNEQLYVEDLPVKQLAEEFGTPLYIYSRATLERHWHAFDSALGDHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN ++ +A LGSG DIVS+GEL R L A A ++VFSGV K+ EI AL+ GI Sbjct: 61 ANSNIGILNVMAKLGSGFDIVSQGELERVLEAGGEASKVVFSGVAKSRAEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ + + Sbjct: 121 CFNVESVAELHHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVDEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+TLP V+I+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLAATLPHVRITGMDCHIGSQLTELQPFLDATDRLIRLIEQLQEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S A+L+++ G +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYAAALLNKLKGYENLEIILEPGRAIAANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I G R D+VGP+CET DF+ R++A Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIIEIDRTLG-REKAIYDVVGPVCETSDFLGKQRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD + GAYGA S YNSR E++V+G + H+IR R F EL L+SI Sbjct: 359 AEGDYIAQRSAGAYGASMSSNYNSRPRTAEVLVDGDKAHLIRRRENFSELWALESI 414 >gi|315635221|ref|ZP_07890498.1| diaminopimelate decarboxylase [Aggregatibacter segnis ATCC 33393] gi|315475967|gb|EFU66722.1| diaminopimelate decarboxylase [Aggregatibacter segnis ATCC 33393] Length = 416 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 187/416 (44%), Positives = 259/416 (62%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L AEN+ +++LA TP Y YS +E+++ F+NAF +VC+A+K Sbjct: 1 MDFFQYKNNQLMAENLPVKQLAEQFGTPLYVYSRATLERHWHAFNNAFGEHPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N N A++ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ EI AL+ I Sbjct: 61 SNPNIAILNIMAKLGSGFDIVSQGELERVLAAGGDAAKVVFSGVAKSRQEIARALEVNIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNVESEAELLRINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVEQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+TLP +KI G+D HIGSQ+ +++ F A L L +QL +G +++H+D+GGGL Sbjct: 181 VYKLAATLPNIKIVGMDCHIGSQLTELQPFLDAVDRLIVLMEQLNQDGIHLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P + +L + + +II+EPGR + A+ GILVTKV +K + + Sbjct: 241 GVTYTDETPPHPTEYAKALWEKLSAFSELEIIVEPGRAITANAGILVTKVEYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY AY I I R D+VGPICET DF+ RK+A Sbjct: 301 FAIADAGMNDMIRPALYQAYMNILEIDRTLA-REEKIYDVVGPICETSDFLGKQRKLA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L GAYGA S YNSR E+MV+G + ++IR R EL +L+S+ Sbjct: 359 AEGDYLAQRSAGAYGASMSSNYNSRPRTAEVMVDGDKAYLIRRREALNELWQLESL 414 >gi|157377262|ref|YP_001475862.1| diaminopimelate decarboxylase [Shewanella sediminis HAW-EB3] gi|157319636|gb|ABV38734.1| diaminopimelate decarboxylase [Shewanella sediminis HAW-EB3] Length = 414 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 264/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE+ + +LA TP Y YS +E+++ F A ++CYA+K Sbjct: 1 MDHFLYKNNELQAEDCQVAQLAQTYGTPLYIYSRATLERHWHAFDRAVANHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R + A +++VFSGVGKT+ E+++AL GI+ Sbjct: 61 ANSNIAVLNVLARLGSGFDIVSGGELSRVIEAGGSPDKVVFSGVGKTVAEMEMALNLGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN AV LGK AP++ RVNPD++A TH ISTG KE+KFGI + + + Sbjct: 121 CFNVESAAELEQLNLVAVQLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A++LPG+++ GVD HIGSQ+ +I+ F A + L +L G NI+H DVGGGL Sbjct: 181 IFARANSLPGLEVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLAEQGINIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP YA+ + + G K+I EPGR + A+ GI VT+V+ +K ++DK Sbjct: 241 GVTYDDE-TPPQPDVYAAALLERLGGRDLKLIFEPGRAIAANAGIFVTQVLYLKGNSDKH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP+LY A+ I + + + DIVGP+CETGDF+ +R++ Sbjct: 300 FALVDGAMNDLIRPSLYSAWQNIIPVK--PREGETRNYDIVGPVCETGDFLGKDRELN-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L + +GAYG S YNSR EIMV+GS+ H+IR R +L + + + Sbjct: 357 DAGDFLAVRSSGAYGFTMSSNYNSRPRAAEIMVDGSRAHLIREREKLSQLWQGEQL 412 >gi|303248021|ref|ZP_07334287.1| diaminopimelate decarboxylase [Desulfovibrio fructosovorans JJ] gi|302490578|gb|EFL50483.1| diaminopimelate decarboxylase [Desulfovibrio fructosovorans JJ] Length = 412 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 177/415 (42%), Positives = 269/415 (64%), Gaps = 3/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y G L+AE+V + L TP Y YS + +++ F +AFDG+ + C+++K Sbjct: 1 MHHFQYRGGELYAEDVPVSTLVAAYGTPLYIYSAATLRRHFAAFDSAFDGLPHLTCFSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV++TL +G+G+DIVS GEL RALAA + +IV+SGVGK +EI+ AL +GI Sbjct: 61 ANSNLAVLRTLGAMGAGVDIVSGGELYRALAAGIDPAKIVYSGVGKRGNEIEEALNAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ +++ A LGK A ++ R+NP+++ TH ISTG K++KFG+ + + Sbjct: 121 MFNVESMGELERISRIAARLGKNANVSLRINPNVDPKTHPYISTGLKKNKFGLDMETSLA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A LPGV G+D HIGSQ+ IE F +A + ++L + G + +++D+GGGL Sbjct: 181 AYARAMELPGVTPVGIDCHIGSQLTSIEPFLEALDKILIFREKLVAMGISPRYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ + PP ++ + + G+L ++LEPGR +V + GILVT+V+ KK+ K Sbjct: 241 GIQYNEE-EPPHPREFGQALTKALGDLPLTLVLEPGRVIVGNAGILVTEVVYTKKTPSKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D AMND +RP+LYD+YH I+ + +R ++ D+VGPICE+GDF+A +R++ Sbjct: 300 FVIVDAAMNDLIRPSLYDSYHAISEVR--PAERDTLNVDVVGPICESGDFLARDRELPAV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PG+ L + GAYG S YNSR E++V+G + R R T+++L+ L+ Sbjct: 358 APGEYLAVYSAGAYGFTMSSNYNSRPRAAEVLVDGDTVTLARRRETYEDLVALER 412 >gi|188580974|ref|YP_001924419.1| diaminopimelate decarboxylase [Methylobacterium populi BJ001] gi|179344472|gb|ACB79884.1| diaminopimelate decarboxylase [Methylobacterium populi BJ001] Length = 422 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 225/421 (53%), Positives = 303/421 (71%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+V L LA V TPFYCYST +E++Y F+ AF G D +VC+A+K Sbjct: 1 MHHFHYRDGRLHAEDVDLTALADEVGTPFYCYSTATLERHYRVFAQAFAGDDALVCFAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ TLA G+G+DIVSEGELRRALAA VP ERIVFSGVGKT +E+ AL + I Sbjct: 61 ANSNQAVLATLARQGAGMDIVSEGELRRALAAGVPGERIVFSGVGKTREEMAAALDANIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL L++ A S G+KAP++ RVNPD++A TH KISTGK ++KFGIPI + + Sbjct: 121 CFNVESEPELAALSEVAASRGRKAPVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG++I GVD HIGSQI + F A +LL +L + L ++GH + H+D GGGL Sbjct: 181 VYAGAARLPGLEIVGVDAHIGSQITDLTPFDNAARLLCELARDLLADGHRLHHVDFGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLI-HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP + I +F L + + E GR + + GILVT+VI +K + +K Sbjct: 241 GIPYRDDNAPPPDPAALAAILRPHFKPLGLRPVFEIGRMIAGNAGILVTRVIYVKPTDEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+A+H + + PA D + AD+VGP+CE+GD++AL R++ + Sbjct: 301 TFVIVDGAMNDLIRPTLYEAFHALRPLREPAPDTPRLTADVVGPVCESGDYLALGREMPM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDL+ + GAYGAVQ+GTYNSR L+PE++V+G + ++RPR ++ +LI LD +P W Sbjct: 361 AAPGDLIAVMSAGAYGAVQAGTYNSRRLVPEVLVSGDRAAVVRPRPSYDDLIRLDRLPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|107104378|ref|ZP_01368296.1| hypothetical protein PaerPA_01005454 [Pseudomonas aeruginosa PACS2] gi|218894380|ref|YP_002443250.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa LESB58] gi|254243836|ref|ZP_04937158.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa 2192] gi|126197214|gb|EAZ61277.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa 2192] gi|218774609|emb|CAW30426.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa LESB58] Length = 415 Score = 321 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 190/416 (45%), Positives = 260/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L AE V+L ++A TP Y YS IE Y +++A GM +VC+A+K Sbjct: 1 MDTFSYRDGELFAEGVALSRIAERFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA ++VFSGVGKT D++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A LG KAP++ RVNPD++A TH ISTG KE+KFGI I + + Sbjct: 121 CFNVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ L +++ GVD HIGSQ+ Q+E F A + L L +L G I+H+D+GGGL Sbjct: 181 VYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP + DY I + ++ EPGR +VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-QPPLAGDYIRAIRERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ + D D+VGPICETGDF+A +R +A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMD--VQAVRPRDAAPRRYDLVGPICETGDFLAKDRDLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G Q H +R R T QEL +S+ Sbjct: 357 AEGDLLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQTHEVRRRETVQELYAGESL 412 >gi|24375791|ref|NP_719834.1| diaminopimelate decarboxylase [Shewanella oneidensis MR-1] gi|24350739|gb|AAN57278.1|AE015863_7 diaminopimelate decarboxylase [Shewanella oneidensis MR-1] Length = 414 Score = 321 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 263/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +L+AE + LA TP Y YS +E+++ F+NA G +VCYA+K Sbjct: 1 MDHFLYQDNTLYAEGCRVNDLAQTYGTPLYIYSRATLERHWHAFNNAVAGHPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT+ E++ AL GIY Sbjct: 61 ANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A LGK AP++ RVNPD++A TH ISTG KE+KFGI + + + Sbjct: 121 CFNVESSAELEQLNLVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A LP +++ GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 VFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLSLIDRLAEQGIVIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP YA+ + + G+ + K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTYDDE-TPPHPDVYAAALLKRLGHRKLKLIFEPGRAIAANAGIFVTEVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ +I + DIVGP+CETGDF+ +R+ A Sbjct: 300 FAIVDGAMNDLIRPALYSAWQKIIPVTPRDDQA--HVFDIVGPVCETGDFLGKDREFA-I 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL + +GAYG + YN+R E+MV+G + +++R R +L + + + Sbjct: 357 APGDLLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLPQLWQGEQL 412 >gi|294142609|ref|YP_003558587.1| diaminopimelate decarboxylase [Shewanella violacea DSS12] gi|293329078|dbj|BAJ03809.1| diaminopimelate decarboxylase [Shewanella violacea DSS12] Length = 414 Score = 321 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 182/416 (43%), Positives = 261/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE+ S+ LA TP Y YS +E+++ F A ++CYA+K Sbjct: 1 MDHFLYKNNELLAEDCSVADLARTHGTPLYIYSRATLERHWHAFDRAVADHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL+R + A ++VFSGVGKT E+++AL GI+ Sbjct: 61 ANSNIAVLNVLARLGSGFDIVSGGELQRVIQAGGDPAKVVFSGVGKTAAEMEMALNLGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A +GK AP++ R+NPD++A TH ISTG K++KFGI + Q + Sbjct: 121 CFNVESAAELEQLNIVAGRIGKLAPVSLRINPDVDAGTHPYISTGLKDNKFGIAMEQAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A+ LP +K+ GVD HIGSQ+ +I+ F A + L +L G +I+H DVGGGL Sbjct: 181 IFARAAALPNLKVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLAEQGIHIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP + YA+ + + G+ + K+I EPGR + A+ GI VT+V+ +K + DK Sbjct: 241 GVPYDDE-TPPQPAVYAAALIERLGDRKLKLIFEPGRAIAANAGIFVTQVLYLKGNGDKH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP LY A+ I + D ++ DIVGP+CETGDF+ +R++ Sbjct: 300 FALVDGAMNDLIRPALYSAWQNIIPV--NPRDGETLNYDIVGPVCETGDFLGKDRELN-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L + +GAYG S YNSR E+MV+G Q ++IR R +L + + + Sbjct: 357 AAGDFLAVRSSGAYGFTMSSNYNSRPRAAELMVDGEQAYVIREREKVTQLWQGEQL 412 >gi|126726029|ref|ZP_01741871.1| diaminopimelate decarboxylase [Rhodobacterales bacterium HTCC2150] gi|126705233|gb|EBA04324.1| diaminopimelate decarboxylase [Rhodobacterales bacterium HTCC2150] Length = 421 Score = 321 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 200/421 (47%), Positives = 280/421 (66%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+LHAE+V L +A V TPFY YS +++ A ++CYA+K Sbjct: 1 MDHFMYRDGALHAEDVPLADIATAVGTPFYAYSAATFARHFQVLDEALSWGPHLICYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQA++K L +G+G+D+VS GE RA AA VP ERIVFSGVGKT DEI++ L+ GI Sbjct: 61 ANSNQAILKMLGDMGAGMDVVSGGEYARARAAGVPGERIVFSGVGKTRDEIEMTLKGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ L++ A LG API RVNPD++A TH+KI+TGKKE+KFGIPI + Sbjct: 121 QFNVESEPEMVVLSEIATKLGLIAPITIRVNPDVDAKTHEKIATGKKENKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+KI G+D+HIGSQ+ + + +AF+L+ +LT+ LR +GH I +D+GGGL Sbjct: 181 VYAMAAGLPGLKIVGIDVHIGSQLTDLTPYREAFELVAELTKTLREDGHEISRLDLGGGL 240 Query: 241 GIAY-HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y + PP ++Y ++ + G+L C+I +EPGR + + G+LV++VI +K D+ Sbjct: 241 GIPYARDNDAPPVPAEYGQIVRETVGDLGCEIEIEPGRLVAGNAGVLVSEVIYVKSGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +Y A+H+I + DIVGP+CE+GD A R + Sbjct: 301 EFLILDAAMNDLIRPAMYSAHHDIVPLKEAEVGVEMQPYDIVGPVCESGDTFAKQRPLPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 DL+ GAYGAV + YN+R ++PE++V G QF +IRPR T +E+I D +P W Sbjct: 361 LEATDLVAFRSAGAYGAVMASEYNTRPMVPEVLVMGDQFAVIRPRPTLEEIINRDIVPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|77464302|ref|YP_353806.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides 2.4.1] gi|332559193|ref|ZP_08413515.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides WS8N] gi|77388720|gb|ABA79905.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides 2.4.1] gi|332276905|gb|EGJ22220.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides WS8N] Length = 421 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 205/421 (48%), Positives = 287/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y GSLHAE V L +A V TPFYCYS +E++Y F+ A + +VC+A+K Sbjct: 1 MDHFLYRNGSLHAEEVPLSDIAATVGTPFYCYSAATLERHYRLFTEALTPLPHLVCFAIK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN AV+K L LG+G+D+VS GE RA AA VP +RIVFSGVGKT +E+ +AL+ GI Sbjct: 61 SLSNLAVLKLLGDLGAGMDVVSAGEYLRARAAGVPGDRIVFSGVGKTREEMRIALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ L++ A S+G +APIA RVNPD++A TH+KI+TGKKE+KFGIPI + Sbjct: 121 QFNVESEPEMRALSEVASSMGLRAPIAVRVNPDVDARTHEKIATGKKENKFGIPIERASE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+++ G+D+HIGSQ+ ++E F +A+ + +LT +LR+ GH I+ +D+GGGL Sbjct: 181 VYAEAAALPGLEVMGIDVHIGSQLTELEPFEQAYLKVAELTGRLRAEGHEIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +DY +LI + G+L C+I +EPGR + + G+LV++VI +K + Sbjct: 241 GIPYTRSNEAPPLPTDYGALIKRTVGHLGCEIEIEPGRLISGNSGVLVSRVIYVKNGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP++Y A+H+I + A D+VGP+CETGD A R + Sbjct: 301 DFLILDAAMNDLVRPSMYGAHHDIVPLAEAAPGTESQPYDVVGPVCETGDTFAKARALPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR L+PE++V G F +IR R TF E++ DSIP W Sbjct: 361 MAEGDLVAFRSAGAYGAVMASEYNSRPLVPEVLVRGDHFAVIRARPTFDEMLGRDSIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|89052972|ref|YP_508423.1| diaminopimelate decarboxylase [Jannaschia sp. CCS1] gi|88862521|gb|ABD53398.1| diaminopimelate decarboxylase [Jannaschia sp. CCS1] Length = 421 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 202/421 (47%), Positives = 282/421 (66%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G+LHAE+V + +A V TPFY YST + +++ F A GMD ++C+A+K Sbjct: 1 MDHFLYKNGALHAEDVPVADIAASVGTPFYVYSTATLTRHFQLFEEALGGMDHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSNQAV+ +A LG+G+D+VS GE RA AA VP ++IVFSG+GKT DE+ LAL GI Sbjct: 61 SNSNQAVLSHMAMLGAGMDVVSGGEYLRAKAAGVPGDKIVFSGIGKTEDEMRLALNGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ L++ A +LG PI RVNPD++A TH KI+TG+KEDKFGIPI + Sbjct: 121 QFNVESEPEMHRLSRVATALGVTVPITVRVNPDVDAKTHAKIATGRKEDKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A++LPG+++ G+D+HIGSQ+ +E F A+ + +LT+QLR +GH I +D+GGGL Sbjct: 181 VYALAASLPGLQVIGIDVHIGSQLTDLEPFEIAYAKVAELTEQLREDGHTITRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +Y +I + G+L C+I +EPGR + + G+LV I +K D+ Sbjct: 241 GIPYERSNSAPPLPIEYGEVIKRTVGHLGCEIEIEPGRLISGNAGLLVASTIYVKHGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +Y AYH+I +V PA DIVGP+CE+GD A R + Sbjct: 301 DFLILDAAMNDLIRPAMYGAYHDIIPVVEPAPGAEQSPYDIVGPVCESGDTFAKQRDLPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + DL+ GAYGAV S YN+R LIPE++VNG QF +IR R +F ++I D++P W Sbjct: 361 VKEADLIAFRSAGAYGAVMSSEYNTRPLIPEVLVNGDQFAVIRARPSFDDMINRDTLPQW 420 Query: 420 L 420 + Sbjct: 421 M 421 >gi|218885457|ref|YP_002434778.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756411|gb|ACL07310.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 416 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 178/414 (42%), Positives = 253/414 (61%), Gaps = 3/414 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y EG L+AE V + +LA TP Y YS + +++ F +AF G+ + CY++K Sbjct: 1 MHHFQYREGQLYAEGVPVHELASRYGTPLYVYSAATLRRHFQAFDSAFTGVGHLTCYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN +++ LA +G+G+DIVS GEL RALAA VP +RIV+SGVGK DEI AL++ I Sbjct: 61 ANSNVHLLRLLADMGAGMDIVSGGELHRALAAGVPGQRIVYSGVGKQDDEIRAALEADIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ +N A +G+ A I R+NPD++ TH ISTG + +KFG+ + Q + Sbjct: 121 LFNVESVQELERINAVAGQMGRTARIGVRINPDVDPKTHPYISTGMRNNKFGLDMEQALA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A LP V+ G+D HIGSQ+ + F +A + D ++LR G I H+D+GGGL Sbjct: 181 AYLLARDLPNVQPVGIDCHIGSQLTTLAPFLEALDRVLDFHERLRDLGLAITHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP ++ + + +ILEPGR + + GILV +VI K + K Sbjct: 241 GITYGEE-TPPHPREFGEAVSERLRGRGLSLILEPGRVIAGNAGILVGRVIYTKSTPSKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I D AMND +RP+LY +YH I + R I AD+VGPICE+GDF+A +R + Sbjct: 300 FIIADAAMNDLVRPSLYQSYHRIAEV--QPAGRDEITADVVGPICESGDFLARDRILPDM 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + G+LL + GAYG S YNSR E++V+G+ IR R T +L+ + Sbjct: 358 QQGELLAVFSAGAYGFSMSSNYNSRPRAAEVLVDGATARCIRKRETLADLVAPE 411 >gi|221640187|ref|YP_002526449.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides KD131] gi|221160968|gb|ACM01948.1| Diaminopimelate decarboxylase [Rhodobacter sphaeroides KD131] Length = 435 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 206/421 (48%), Positives = 287/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y GSLHAE V L +A V TPFYCYS +E++Y F+ A + +VC+A+K Sbjct: 15 MDHFLYRNGSLHAEEVPLSDIAATVGTPFYCYSAATLERHYRLFTEALTPLPHLVCFAIK 74 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN AV+K L LG+G+D+VS GE RA AA VP +RIVFSGVGKT +E+ +AL+ GI Sbjct: 75 SLSNLAVLKLLGDLGAGMDVVSAGEYLRARAAGVPGDRIVFSGVGKTREEMRIALEGGIR 134 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ L++ A S+G +APIA RVNPD++A TH+KI+TGKKE+KFGIPI + Sbjct: 135 QFNVESEPEMRALSEVASSMGLRAPIAVRVNPDVDARTHEKIATGKKENKFGIPIERASE 194 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+++ GVD+HIGSQ+ ++E F +A+ + +LT +LR+ GH I+ +D+GGGL Sbjct: 195 VYAEAAALPGLEVMGVDVHIGSQLTELEPFEQAYLKVAELTGRLRAEGHEIRRLDLGGGL 254 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +DY +LI + G+L C+I +EPGR + + G+LV++VI +K + Sbjct: 255 GIPYTRSNEAPPLPTDYGALIKRTVGHLGCEIEIEPGRLISGNSGVLVSRVIYVKNGEGR 314 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP++Y A+H+I + A D+VGP+CETGD A R + Sbjct: 315 DFLILDAAMNDLVRPSMYGAHHDIVPLAEAAPGTESQPYDVVGPVCETGDTFAKARALPP 374 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR L+PE++V G F +IR R TF E++ DSIP W Sbjct: 375 MAEGDLVAFRSAGAYGAVMASEYNSRPLVPEVLVRGDHFAVIRARPTFDEMLGRDSIPEW 434 Query: 420 L 420 L Sbjct: 435 L 435 >gi|119384752|ref|YP_915808.1| diaminopimelate decarboxylase [Paracoccus denitrificans PD1222] gi|119374519|gb|ABL70112.1| diaminopimelate decarboxylase [Paracoccus denitrificans PD1222] Length = 421 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 199/421 (47%), Positives = 280/421 (66%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE V L ++A V TP Y YS + +++ F A D +VC+A+K Sbjct: 1 MDHFNYVDGWLHAEEVPLARIAAEVGTPVYVYSAATLTRHFKLFQQALAWTDHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+K L LG+G+DIVS GE RA AA VP ERIVFSGVGK E+ +AL+ GI Sbjct: 61 ANSNIAVLKLLGDLGAGMDIVSGGEYARARAAGVPGERIVFSGVGKLEPEMRMALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE EL+ L++ A S+G +APIA RVNPD++A TH+KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPELELLSRVASSMGVEAPIAVRVNPDVDARTHEKIATGKSENKFGIPIARARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+ LPG+K+ G+DMHIGSQ+ +E + +A+ + +LT+ LR++GH I +D+GGGL Sbjct: 181 VYAHAARLPGIKVVGIDMHIGSQLTDLEPYRQAYAKMAELTRALRADGHRITRLDMGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 ++ PP +Y +I G+L C+I +EPGR + + GIL++ VI +K+ + Sbjct: 241 GIPYRRDNNAPPLPIEYGQVIRDAVGDLGCEIEIEPGRNIAGNAGILLSSVIYLKQGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +Y A+H+I + A D+VGP+CETGD ++ Sbjct: 301 DFLILDAAMNDLIRPAMYSAHHDIVPVREAAPGAEVAPHDVVGPVCETGDTFQKAVELPA 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDL+ + GAYGAV + YNSR L+PE++V+ QF +IR R T +E++ D+IP W Sbjct: 361 LGPGDLVALRSAGAYGAVMASEYNSRPLVPEVLVSADQFAVIRARPTLEEMLGRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|146280906|ref|YP_001171059.1| diaminopimelate decarboxylase [Pseudomonas stutzeri A1501] gi|145569111|gb|ABP78217.1| diaminopimelate decarboxylase [Pseudomonas stutzeri A1501] gi|327479175|gb|AEA82485.1| diaminopimelate decarboxylase [Pseudomonas stutzeri DSM 4166] Length = 415 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 195/416 (46%), Positives = 262/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L LA TP Y YS IE Y +++A +GM +VC+A+K Sbjct: 1 MEAFSYRDGQLFAEGVALPALAQRFGTPTYVYSRAHIEAQYRAYADALEGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA RIVFSGVGKT D++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGEPGRIVFSGVGKTRDDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L Q A LG KAP++ RVNPD++A TH ISTG KE+KFGI I + Sbjct: 121 CFNVESTDELERLQQVAAELGMKAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIDNAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LP +++ GVD HIGSQ+ + F A L L +L + G I+H+D+GGGL Sbjct: 181 VYARAAELPNLEVVGVDCHIGSQLTSLPPFLDALDRLLALIDRLATRGIQIRHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP + DY + Q ++ EPGR +VA+ G+L+T+V +K +A K Sbjct: 241 GVRYRDE-QPPLAGDYIQAVRQRIEGRGLALVFEPGRSIVANAGLLLTRVEYLKHTAHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ + + GD DIVGPICETGDF+A +R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMNVIAVQPHEGD--TRRYDIVGPICETGDFLAKDRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G Q +R R + QEL +S+ Sbjct: 357 AEGDLLAVCSAGAYGFVMSSNYNTRGRAAEVLVDGDQAFEVRRRESVQELYAGESL 412 >gi|17986368|ref|NP_539002.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|17981958|gb|AAL51266.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. 16M] Length = 421 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 236/421 (56%), Positives = 317/421 (75%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G LHAENVSL ++A V TPFY YS IE+++ F +AF MDT+V YALK Sbjct: 1 MNHFEYRNGVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ LA LG+G D VS+GE+RRALAA +PA RIVFSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLTALAKLGAGADTVSQGEIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+ GK AP++ R+NPD++A TH KISTGK E+KFGIP + + Sbjct: 121 CFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ +L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGL 240 Query: 241 GIAYHSDHRPPSSSD-YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y + + PP YA ++ ++ L K + EPGR +V + G+LVT+VI +K+ K Sbjct: 241 GIPYRTPNTPPPPPVAYAQIVAKHIKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+H+I ++ P + I AD VGP+CETGD++ L+R++A Sbjct: 301 NFVIVDAAMNDLIRPTLYDAFHDIRPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ I TGAYGAV S TYNSRLLIPE++ +G ++H++RPR T++EL+ LDS+P W Sbjct: 361 PAPGDLIAICTTGAYGAVLSSTYNSRLLIPEVLGDGERYHVVRPRRTYEELLALDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|116053426|ref|YP_793751.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa UCBPP-PA14] gi|254238026|ref|ZP_04931349.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa C3719] gi|296392135|ref|ZP_06881610.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PAb1] gi|313106693|ref|ZP_07792911.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa 39016] gi|115588647|gb|ABJ14662.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa UCBPP-PA14] gi|126169957|gb|EAZ55468.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa C3719] gi|310879413|gb|EFQ38007.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa 39016] Length = 415 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 190/416 (45%), Positives = 261/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L AE V+L ++A TP Y YS IE Y +++A GM +VC+A+K Sbjct: 1 MDTFSYRDGELFAEGVALSRIAERFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA ++VFSGVGKT D++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A LG KAP++ RVNPD++A TH ISTG KE+KFGI I + + Sbjct: 121 CFNVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ L +++ GVD HIGSQ+ Q+E F A + L L +L G I+H+D+GGGL Sbjct: 181 VYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP + DY I + ++ EPGR +VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-QPPLAGDYIRAIRERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ + D + D+VGPICETGDF+A +R +A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMD--VQAVRPRDAVPRRYDLVGPICETGDFLAKDRDLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G Q H +R R T QEL +S+ Sbjct: 357 AEGDLLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQTHEVRRRETVQELYAGESL 412 >gi|254454697|ref|ZP_05068134.1| diaminopimelate decarboxylase [Octadecabacter antarcticus 238] gi|198269103|gb|EDY93373.1| diaminopimelate decarboxylase [Octadecabacter antarcticus 238] Length = 421 Score = 320 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 209/421 (49%), Positives = 292/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L AE+V++ ++A V TPFY YST + +++ F +A GMD +VC+A+K Sbjct: 1 MDHFLYRDGQLMAEDVNIAEIAAQVGTPFYVYSTATLLRHFKLFDDALSGMDHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN AV+K L G+G+D+VS GE RA AA V ++IVFSG+GKT +E+ LAL+ GI Sbjct: 61 SLSNVAVLKLLGDAGAGMDVVSGGEYLRAKAAGVSGDKIVFSGIGKTREEMRLALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ L+Q A+SL API RVNPD++A TH KISTGKKEDKFGIPI + Sbjct: 121 QFNVESEPEMEALSQVALSLNTVAPITVRVNPDVDAKTHAKISTGKKEDKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+K+ G+D+HIGSQ+ ++E F A++ + +LT+QLRS+GH+I +D+GGGL Sbjct: 181 VYAMAAKLPGLKVIGIDVHIGSQLTELEPFRLAYRKVAELTEQLRSDGHDITRLDLGGGL 240 Query: 241 GIAY-HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y ++ PP +Y +LI + G+L C+I +EPGR + + G+LV KVI +K D+ Sbjct: 241 GIPYARDNNAPPLPREYGALIKEEVGHLGCEIEIEPGRLISGNAGLLVAKVIYVKSGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RP +YDA+H+I ++ PA D+VGPICE+GD A R + Sbjct: 301 EFLIVDAAMNDLVRPAMYDAWHDIVPVIEPAAGVDQTPYDVVGPICESGDTFAKGRMLPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P L+ GAY AV S YNSR LIPE++VNG QF +IR R TF+++I D+IP W Sbjct: 361 LDPEALVGFRSAGAYSAVMSSEYNSRPLIPEVLVNGDQFAVIRRRPTFEDMINRDTIPEW 420 Query: 420 L 420 + Sbjct: 421 M 421 >gi|126463144|ref|YP_001044258.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides ATCC 17029] gi|126104808|gb|ABN77486.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides ATCC 17029] Length = 421 Score = 320 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 205/421 (48%), Positives = 287/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y GSLHAE V L +A V TPFYCYS +E++Y F+ A + +VC+A+K Sbjct: 1 MDHFLYRNGSLHAEEVPLSDIAATVGTPFYCYSAATLERHYRLFTEALTPLPHLVCFAIK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN AV+K L LG+G+D+VS GE RA AA VP +RIVFSGVGKT +E+ +AL+ GI Sbjct: 61 SLSNLAVLKLLGDLGAGMDVVSAGEYLRARAAGVPGDRIVFSGVGKTREEMRIALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ L++ A S+G +APIA RVNPD++A TH+KI+TGKKE+KFGIPI + Sbjct: 121 QFNVESEPEMRALSEVASSMGLRAPIAVRVNPDVDARTHEKIATGKKENKFGIPIERASE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+++ G+D+HIGSQ+ ++E F +A+ + +LT +LR+ GH I+ +D+GGGL Sbjct: 181 VYAEAAALPGLEVMGIDVHIGSQLTELEPFEQAYLKVAELTGRLRAEGHEIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP +DY +LI + G+L C+I +EPGR + + G+LV++VI +K + Sbjct: 241 GIPYTRSNEAPPLPTDYGALIKRTVGHLGCEIEIEPGRLISGNSGVLVSRVIYVKNGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP++Y A+H+I + A D+VGP+CETGD A R + Sbjct: 301 DFLILDAAMNDLVRPSMYGAHHDIVPLAEAAPGTDSQPYDVVGPVCETGDTFAKARALPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR L+PE++V G F +IR R TF E++ DSIP W Sbjct: 361 MAEGDLVAFRSAGAYGAVMASEYNSRPLVPEVLVRGDHFAVIRARPTFDEMLGRDSIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|304394204|ref|ZP_07376127.1| diaminopimelate decarboxylase [Ahrensia sp. R2A130] gi|303293644|gb|EFL88021.1| diaminopimelate decarboxylase [Ahrensia sp. R2A130] Length = 423 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 227/420 (54%), Positives = 310/420 (73%), Gaps = 1/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y G LHAE+VSL ++A V TPFY YS+ + ++Y F++AF +D +VCYA+K Sbjct: 1 MNHFDYRNGILHAEDVSLPRIAEEVGTPFYVYSSATLTRHYTVFADAFSELDALVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++TLA LGSG D+VS GEL RA A +PA +I+FSGVGKT+ E+DLAL I Sbjct: 61 ANSNQAVLETLARLGSGADVVSGGELTRARRAGIPASKIMFSGVGKTVAEMDLALGEEIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ESE EL+ L+ RA ++GK A ++FR+NPD++A T +KISTGKK DKFGIP + Sbjct: 121 CFNIESEPELEMLSARAAAMGKTAHVSFRINPDVDAKTIEKISTGKKTDKFGIPHEEASR 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+K++G+DMHIGSQI + F AF L DL LR GH+IQH+DVGGGL Sbjct: 181 IYARAAELPGIKVTGIDMHIGSQITDLAPFDTAFGKLADLVGHLRGEGHDIQHVDVGGGL 240 Query: 241 GIAYH-SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI YH ++ PP+ DYA+++ ++ L K+I EPGR + + G+ VTKVI +K+ + Sbjct: 241 GIPYHDDNNPPPNPDDYAAVVKKHVTGLDAKVIFEPGRLIAGNAGLFVTKVIYVKEGDAR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 +FVI+D AMND +RPTLY+AYHE+ + G+ AD+VGP+CE+GD++A R++ Sbjct: 301 SFVIVDGAMNDLIRPTLYEAYHEVRSVDVNRGNGPRFTADVVGPVCESGDYLAKEREMQK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PRPGDL+ + GAYGAVQ+GTYN+R L+PE+MV G Q+H+IRPR++ ELI+LDS+P W Sbjct: 361 PRPGDLIALGSAGAYGAVQAGTYNTRALVPEVMVKGDQYHVIRPRLSLDELIDLDSVPDW 420 >gi|182677052|ref|YP_001831198.1| diaminopimelate decarboxylase [Beijerinckia indica subsp. indica ATCC 9039] gi|182632935|gb|ACB93709.1| diaminopimelate decarboxylase [Beijerinckia indica subsp. indica ATCC 9039] Length = 423 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 234/423 (55%), Positives = 304/423 (71%), Gaps = 2/423 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F G +HAE+V LE+LA + TPFYCYST I ++Y F AF G D++VCYA+K Sbjct: 1 MHHFALRNGVMHAEDVDLERLAETIGTPFYCYSTATITRHYEVFKAAFAGQDSLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++TLA LG+G+D+VSEGELRRA AA VPA+R+ FSGVGKT EI LAL GI+ Sbjct: 61 ANSNQAVLQTLARLGAGMDVVSEGELRRARAAGVPADRVTFSGVGKTEREIALALDEGIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL ++ AV+ K A IA RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 CFNVESEPELAAISALAVARNKTAHIALRVNPDVDAKTHAKIATGKSENKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A LPG+ I+GVD+HIGSQI + F AF + LR++GH I H+D+GGGL Sbjct: 181 VYRMAKNLPGIAITGVDLHIGSQITDLTPFDHAFARAAEFVALLRADGHAIDHVDLGGGL 240 Query: 241 GIAYH--SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 GI YH D YA +I + G L K++LEPGR +V + G+LVT+V+ +K+ + Sbjct: 241 GIPYHSGDDPETYHPDLYAGIIKKRLGGLGLKLVLEPGRLIVGNAGVLVTRVLYVKQGEN 300 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 KTFVI+D AMND +RPTLY+A+HEI + P D + ADIVGP+CETGD++AL R++ Sbjct: 301 KTFVIVDAAMNDLVRPTLYEAHHEIAPLRPPLQDAPGVVADIVGPVCETGDYLALARRMP 360 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 PRPGD L I GAYGAVQ+ TYN+RLL+PE++V G+ + ++RPR T++ELI LD IPA Sbjct: 361 EPRPGDYLAILSAGAYGAVQACTYNTRLLVPEVLVKGAAYAVVRPRGTYEELIGLDKIPA 420 Query: 419 WLQ 421 WL+ Sbjct: 421 WLE 423 >gi|104784267|ref|YP_610765.1| diaminopimelate decarboxylase [Pseudomonas entomophila L48] gi|95113254|emb|CAK17982.1| diaminopimelate decarboxylase [Pseudomonas entomophila L48] Length = 415 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 264/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y ++++A G++ +VC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAVAERFGTPTYVYSRAHIEAQYRSYTDALQGVEHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA A+R+VFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNLLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L A +GK AP++ RVNPD++A TH ISTG KE+KFGI I + Sbjct: 121 CFNVESSDELERLQVVAAEMGKTAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP + + GVD HIGSQ+ +E F A L L +L G +++H+D+GGG+ Sbjct: 181 IYVRAAQLPNLDVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP +DY I + G+ + ++ EPGR++VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-QPPVLADYIQAIRERVGDRELALVFEPGRYIVANGGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ +++ + G+ D+VGPICETGDF+ +R + Sbjct: 300 FAIIDAAMNDLIRPALYQAWMDVSAVKPREGEGR--AYDLVGPICETGDFLGKDRVL-DL 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G Q +R R T EL +S+ Sbjct: 357 AEGDLLAVRSAGAYGFVMSSNYNTRGRCAEVLVDGDQAFEVRRRETVAELFAGESL 412 >gi|291288389|ref|YP_003505205.1| diaminopimelate decarboxylase [Denitrovibrio acetiphilus DSM 12809] gi|290885549|gb|ADD69249.1| diaminopimelate decarboxylase [Denitrovibrio acetiphilus DSM 12809] Length = 419 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 191/421 (45%), Positives = 264/421 (62%), Gaps = 4/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS+F+Y +LH ENVSL+++A V TPFY YS + K + F NAF+GMD +VCYA+K Sbjct: 1 MSSFQYKNETLHCENVSLKQIAEEVGTPFYVYSANGLRKRFREFDNAFEGMDRIVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A N V+ L GSG DIVS GEL RAL A + +IVF+GVGKT +EI + S I Sbjct: 61 ACGNIGVLALLGSEGSGADIVSGGELHRALKAGMDKNKIVFAGVGKTEEEIKFGISSDIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN ES E+ +N+ A + A IA RVNPD++A TH ISTG K++KFGIP+ + Sbjct: 121 MFNAESRQEIDLINKCAGEMNATARIAIRVNPDVDAKTHPYISTGLKKNKFGIPVDKAKE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YAS+LP ++ G+ HIGSQ+ +I F A +L L + LR NG NI+++D+GGGL Sbjct: 181 DYIYASSLPNIEAVGIHCHIGSQLTEISPFRDAAAILVKLIKDLRKNGVNIKYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI YH + PS +YA I + + ++ EPGR + + G LVTKV+ K++ +K+ Sbjct: 241 GITYHDE-HAPSHKEYAEAIKEVIRDEDFTLVFEPGRNISGNAGALVTKVLYTKETEEKS 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP+LY+AYHE + DIVGPICE+ DF+A +R + Sbjct: 300 FKIVDAAMNDLARPSLYNAYHE---VQAVDSTEKMFTGDIVGPICESSDFLAKDRNMPNV 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 + G L + TGAYG + YNSR +PEI+V+G +HI+R R T+ +L + IP +L Sbjct: 357 KRGGLYAVMDTGAYGMTMASNYNSRPRVPEILVDGENYHIVRRRETYDDLTGPEGIPKYL 416 Query: 421 Q 421 + Sbjct: 417 R 417 >gi|254292613|ref|YP_003058636.1| diaminopimelate decarboxylase [Hirschia baltica ATCC 49814] gi|254041144|gb|ACT57939.1| diaminopimelate decarboxylase [Hirschia baltica ATCC 49814] Length = 421 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 190/421 (45%), Positives = 264/421 (62%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G L E V L+ +A+ V TP Y YST +E++Y + AF+G ++ Y++K Sbjct: 1 MHHFNYVNGRLQCEGVPLDDIANQVGTPTYVYSTATLERHYNVLAEAFEGSKYLIAYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A N VI TLA LG+G D+VS GEL +AL A +PAE+IVFSGVGKT E+ AL +GI+ Sbjct: 61 ACGNIGVIATLAKLGAGADVVSGGELAKALHAGIPAEKIVFSGVGKTHAELTAALNAGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES E++ LN+ A+ LGK APIAFRVNP ++A H ISTG E KFGI H+ Sbjct: 121 QFNVESFPEMERLNEIAIGLGKVAPIAFRVNPHVDAGGHANISTGGAEHKFGIAWHEAAD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ + G+ GVD+HIGSQI IE AF+ + L ++LR+ G I+ +D+GGGL Sbjct: 181 MYAKAAAMEGINPIGVDVHIGSQIMDIEPMRIAFEKVVALVRELRAQGIEIKRMDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + P S + YA +I + + ++ILEPGR + + G+++ V +K+ +T Sbjct: 241 GIPYAPEDNPDSPAKYAQMIREVKQGVDVELILEPGRMIAGNAGVMLANVEYVKERDGRT 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVILD MND RP LYD+ HE+ ++ PA D D+VGP+CET D R + Sbjct: 301 FVILDAGMNDLARPALYDSIHEVQPLIEPASDAPIAPVDLVGPVCETTDRFQKARPMHPL 360 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 + D + GAYGAV S YN+R L E++VNG F +IRPR ++ ++I L+ P WL Sbjct: 361 KQDDKIAFMSAGAYGAVLSSQYNARPLAAEVLVNGDSFSVIRPRPSYDDIIALEKQPDWL 420 Query: 421 Q 421 + Sbjct: 421 E 421 >gi|323135718|ref|ZP_08070801.1| diaminopimelate decarboxylase [Methylocystis sp. ATCC 49242] gi|322398809|gb|EFY01328.1| diaminopimelate decarboxylase [Methylocystis sp. ATCC 49242] Length = 421 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 226/422 (53%), Positives = 304/422 (72%), Gaps = 3/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+LHAE+V++ +A V TPFYCYS I +++ F+ AFDG+D MVCYA+K Sbjct: 1 MHHFDYRDGALHAEDVAVSAIADCVGTPFYCYSAATIRRHFRVFAQAFDGLDAMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++ LA G+G+D+VS GEL RALAA P RI +SGVGKT +EI AL + I+ Sbjct: 61 ANSNQAVLRLLAKEGAGMDVVSGGELARALAAGAPGGRITYSGVGKTEEEIAAALDADIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ +++ A +GK A ++ RVNPD++A THKKISTGK E+KFG+P+ Sbjct: 121 CFNVESEPELEAISRVATRMGKVARVSLRVNPDVDARTHKKISTGKAENKFGVPLSHARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ GV I+G DMHIGSQ+ +E F +AF LL +L LR++GH+I H+D+GGGL Sbjct: 181 VYARAAKFRGVDITGADMHIGSQLTDLEPFDEAFSLLAELVVDLRADGHHISHVDLGGGL 240 Query: 241 GIAYH--SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 GI YH D + YA+++ ++F L CK++LEPGR +V + G+LVT+VI +K Sbjct: 241 GIPYHEGDDPQSYHPERYAAIVRKHFAGLNCKLVLEPGRLIVGNAGVLVTRVIYVKHGEA 300 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 KTFVI+D MND +RPTLYD H V A DR I AD+VGP+CETGD++AL+RK+ Sbjct: 301 KTFVIVDAGMNDLVRPTLYD-AHHDIIPVRAAADREEITADVVGPVCETGDYLALDRKMP 359 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 RPG+LL + GAYGAVQ+GTYN+R LIPE++V+G +F +IRPR + ELI +D +P Sbjct: 360 EARPGELLAVLTAGAYGAVQAGTYNTRPLIPEVLVDGERFAVIRPRPSVAELIAMDRVPD 419 Query: 419 WL 420 WL Sbjct: 420 WL 421 >gi|254560913|ref|YP_003068008.1| diaminopimelate decarboxylase [Methylobacterium extorquens DM4] gi|254268191|emb|CAX24106.1| diaminopimelate decarboxylase [Methylobacterium extorquens DM4] Length = 422 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 224/421 (53%), Positives = 304/421 (72%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y +G LHAE+V L LA V TPFYCYST +E++Y F+ AF G D +VC+A+K Sbjct: 1 MHHFQYRDGRLHAEDVDLTALAEEVGTPFYCYSTATLERHYRVFAEAFAGDDALVCFAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ TLAH G+G+DIVSEGELRRALAA VP ERIVFSGVGKT +E+ AL + I Sbjct: 61 ANSNQAVLATLAHQGAGMDIVSEGELRRALAAGVPGERIVFSGVGKTREEMAAALDANIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL L++ AV+ G+KAP++ RVNPD++A TH KISTGK ++KFGIPI + + Sbjct: 121 CFNVESEPELAALSEVAVARGRKAPVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG++I GVD HIGSQI + F A +LL +L + L ++GH + H+D GGGL Sbjct: 181 VYAGAARLPGLEIVGVDAHIGSQITDLTPFDNAARLLCELARDLLADGHRLHHVDFGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLI-HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP + I +F L + + E GR + + GILVT+VI +K + +K Sbjct: 241 GIPYRDDNAPPPDPAALAAILRPHFKPLGLRPVFEIGRMIAGNAGILVTRVIYVKPTDEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+A+H + + PA + + AD+VGP+CE+GD++AL R++ + Sbjct: 301 TFVIVDGAMNDLIRPTLYEAFHALRPVRKPAPNTPRLTADVVGPVCESGDYLALGREMPM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDL+ + GAYGAVQ+ TYNSR L+PE++V G + ++RPR ++ +LI LD +P W Sbjct: 361 VAPGDLIAVMSAGAYGAVQACTYNSRRLVPEVLVTGDRSAVVRPRPSYDDLIRLDRLPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|119475311|ref|ZP_01615664.1| diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2143] gi|119451514|gb|EAW32747.1| diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2143] Length = 415 Score = 319 bits (818), Expect = 5e-85, Method: Composition-based stats. Identities = 188/416 (45%), Positives = 259/416 (62%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF+Y G L AEN+ L +A TP Y YS +E+ +L++ A G M+CYA+K Sbjct: 1 MDAFQYHNGQLQAENIPLAVIAERFGTPTYVYSRGYLEQQFLSYQRALAGRQHMICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LG+G DIVS GEL R LAA ++VFSGV KT E+ AL++GI+ Sbjct: 61 ANSNIAVLNVLARLGAGFDIVSGGELERVLAAGGDPAKVVFSGVAKTPAEMRQALEAGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ESESEL L Q A LG A I+ RVNPD++ANTH ISTG KE+KFGI I + + Sbjct: 121 CFNLESESELGVLQQVAADLGVSASISIRVNPDVDANTHPYISTGLKENKFGIDIDRAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A L + I GVD HIGSQ+ F A L L L ++G +I H+D+GGGL Sbjct: 181 VYRRARDLSHINIIGVDCHIGSQLVDTTPFLDALDRLLKLIDTLANDGIHISHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PPS ++Y + + G+ + EPGR + A+ G+L+TKV +K + +K Sbjct: 241 GVCYTDE-QPPSPAEYIEKVLTHIGDRDITLAFEPGRSICANAGVLLTKVEYLKCNPEKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP LY A+ + V P + DIVGP+CETGDF+ +R++ Sbjct: 300 FAVIDAAMNDMIRPALYQAWMD-IKAVCPRKNEPTKTWDIVGPVCETGDFLGKDRQL-EL 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 R GDLL + GAYG S YNSR+ E+MV+G H+IR R T +L++ +++ Sbjct: 358 REGDLLSVSSAGAYGFTMSSNYNSRVRAAEVMVDGDDVHLIRARETVADLMQGEAL 413 >gi|218530082|ref|YP_002420898.1| diaminopimelate decarboxylase [Methylobacterium chloromethanicum CM4] gi|218522385|gb|ACK82970.1| diaminopimelate decarboxylase [Methylobacterium chloromethanicum CM4] Length = 422 Score = 319 bits (818), Expect = 5e-85, Method: Composition-based stats. Identities = 224/421 (53%), Positives = 302/421 (71%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+V L LA V TPFYCYST +E++Y F+ AF G D +VC+A+K Sbjct: 1 MHHFHYRDGRLHAEDVDLTALAEEVGTPFYCYSTATLERHYRVFAEAFAGDDALVCFAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ TLAH G+G+DIVSEGELRRALAA V ERIVFSGVGKT +E+ AL + I Sbjct: 61 ANSNQAVLATLAHQGAGMDIVSEGELRRALAAGVQGERIVFSGVGKTREEMAAALDANIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL L++ AV+ G+KAP++ RVNPD++A TH KISTGK ++KFGIPI + + Sbjct: 121 CFNVESEPELAALSEVAVARGRKAPVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG++I GVD HIGSQI + F A +LL +L + L ++GH + H+D GGGL Sbjct: 181 VYAGAARLPGLEIVGVDAHIGSQITDLIPFDNAARLLCELARDLLADGHRLHHVDFGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLI-HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP + I +F L + + E GR + + GILVT+VI +K + +K Sbjct: 241 GIPYRDDNAPPPDPAALAAILRPHFKPLGLRPVFEIGRMIAGNAGILVTRVIYVKPTDEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+A+H + + PA D + AD+VGP+CE+GD++AL R++ + Sbjct: 301 TFVIVDGAMNDLIRPTLYEAFHALRPVREPAPDTPRLTADVVGPVCESGDYLALGREMPM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDL+ + GAYGAVQ+ TYNSR L+PE++V G + ++RPR ++ +LI LD +P W Sbjct: 361 VAPGDLIAVMSAGAYGAVQACTYNSRRLVPEVLVTGDRSAVVRPRPSYDDLIRLDRLPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|330812549|ref|YP_004357011.1| diaminopimelate decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380657|gb|AEA72007.1| diaminopimelate decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 415 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 189/416 (45%), Positives = 258/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y G L AE V+L +A TP Y YS IE Y TF++A +GM +VC+A+K Sbjct: 1 MDAFNYRGGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRTFADALEGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA A++IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGSADKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES EL+ L A LG +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNIESTDELERLQIVAAELGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP +++ GVD HIGSQ+ +E F A L L +L G ++HID+GGG+ Sbjct: 181 VYVRAAQLPNLEVLGVDCHIGSQLTTLEPFIDALDRLLALVDRLGDCGIYLRHIDLGGGV 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP +DY + + ++ EPGR++VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLVADYIKAVRERLDGRDLALMFEPGRYIVANAGVLLTQVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + D DIVGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTAVR--PRDTAARSYDIVGPICETGDFLAKGRELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G Q +R R T EL +S+ Sbjct: 357 EEGDLLAVHSAGAYGFVMSSNYNTRGRCAEVLVDGDQAFEVRRRETVVELFAGESL 412 >gi|260428872|ref|ZP_05782849.1| diaminopimelate decarboxylase [Citreicella sp. SE45] gi|260419495|gb|EEX12748.1| diaminopimelate decarboxylase [Citreicella sp. SE45] Length = 421 Score = 319 bits (817), Expect = 6e-85, Method: Composition-based stats. Identities = 204/421 (48%), Positives = 284/421 (67%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G L+AE+V + ++A V TP Y YST + +++ F A D +VCYA+K Sbjct: 1 MDHFLYRNGQLYAEDVPVSEIAAAVGTPVYIYSTATLLRHFRLFDEALDWGPHLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SNQA++KTLA G+G+D+VS GE RALAA VP ERIVFSGVGKT DEI AL+ GI Sbjct: 61 AASNQAILKTLAAAGAGMDVVSGGEYARALAAGVPGERIVFSGVGKTRDEIRTALEGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN+ESE E++ +++ A +LG AP+ RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNIESEPEMRAISEVASALGVVAPVTVRVNPDVDARTHAKIATGKSENKFGIPIAKARQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+K+ G+D+HIGSQ+ +++ F A++ + +LT+ LR++GH I +D+GGGL Sbjct: 181 VYAEAAALPGLKVVGIDVHIGSQLTELDPFALAYRKVAELTEALRADGHEISRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP DY LI + G+L C+I +EPGR + + GILV++VI +K+ + Sbjct: 241 GIPYTRSNEAPPLPVDYGRLIERELGHLGCEIEIEPGRLIAGNAGILVSEVIYVKEGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +YDA+H+I +V P DIVGP+CETGD A R + Sbjct: 301 NFLILDAAMNDLIRPAMYDAHHDIIPVVEPEPGCEQEPYDIVGPVCETGDTFAKARLMPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 R G L+ GAYGAV + YN+R LIPE++V QF +IR R +F+++I DS+P W Sbjct: 361 LRAGGLVAFRSAGAYGAVMASEYNTRALIPEVLVKDDQFAVIRQRPSFEDIINRDSLPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|239906765|ref|YP_002953506.1| diaminopimelate decarboxylase [Desulfovibrio magneticus RS-1] gi|239796631|dbj|BAH75620.1| diaminopimelate decarboxylase [Desulfovibrio magneticus RS-1] Length = 412 Score = 319 bits (817), Expect = 6e-85, Method: Composition-based stats. Identities = 180/415 (43%), Positives = 261/415 (62%), Gaps = 3/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y G L+AE+V + L TP Y YS + +++ F +AF + + CY++K Sbjct: 1 MHHFEYRGGELYAEDVPVSTLVAAYGTPLYVYSAATLRRHFRAFDSAFAALPHLTCYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN +V+KTLA +G+G+DIVS GEL RALAA V ++IV+SGVGK EI+ AL++GI Sbjct: 61 ANSNLSVLKTLAAMGAGMDIVSGGELYRALAAGVDPQKIVYSGVGKRASEIEEALKAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ L+ A LGK A ++ R+NP+++ TH ISTG K++KFG+ I + Sbjct: 121 MFNVESTGELERLSAIASRLGKTAQVSLRINPNVDPKTHPYISTGLKKNKFGLDIDHSLA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A LPGV G+D HIGSQ+ I F +A + +L + G +++D+GGGL Sbjct: 181 AYAKAMELPGVTPVGIDCHIGSQLTSISPFLEALDKILAFRDKLTAMGIETRYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ + PP S++ + + G+L +ILEPGR +V + GILVT+ + KK+ K Sbjct: 241 GIQYNEE-EPPHPSEFGQALTKALGDLPITLILEPGRVIVGNAGILVTEAVYTKKTPSKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I+D AMND +RP+LYD+YH I + R + D+VGPICE+GDF+A +R + Sbjct: 300 FIIVDAAMNDLIRPSLYDSYHAIREVR--PAGRPELSVDVVGPICESGDFLARDRALPAV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PG+ L + GAYG S YNSR EI+V+G + + R R ++ +LI L+ Sbjct: 358 APGEHLAVFSAGAYGFTMSSNYNSRPRAAEILVDGDEVIVARRRESYDDLIALER 412 >gi|260576231|ref|ZP_05844223.1| diaminopimelate decarboxylase [Rhodobacter sp. SW2] gi|259021499|gb|EEW24803.1| diaminopimelate decarboxylase [Rhodobacter sp. SW2] Length = 421 Score = 319 bits (817), Expect = 6e-85, Method: Composition-based stats. Identities = 211/421 (50%), Positives = 288/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y GSLHAE+V+L ++A V TPFYCYS + ++Y F+ A + + +VC+A+K Sbjct: 1 MDHFLYRNGSLHAEDVALTEIAASVGTPFYCYSAATLTRHYALFTEALNPLPHLVCFAIK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN AV+K L LG+G+D+VS GE RRA AA VP +RIVFSGVGKT DE+ LALQ GI Sbjct: 61 SLSNLAVLKLLGDLGAGMDVVSGGEYRRARAAGVPGDRIVFSGVGKTRDEMRLALQGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE EL+ L+Q A LG APIA RVNPD++A TH+KI+TGKKE+KFGIPI + Sbjct: 121 QFNVESEPELRALSQVATELGLTAPIALRVNPDVDARTHEKIATGKKENKFGIPISRAPQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+++ G+D+HIGSQ+ ++E F +AF+ + DLTQ LR+ GH+I+ +D+GGGL Sbjct: 181 VYAEAARLPGLQVVGIDVHIGSQLTELEPFEQAFQKIADLTQTLRAQGHDIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP DY ++I + G+L C+I +EPGR + + G+LV VI +K+ D+ Sbjct: 241 GIPYTRSNEAPPLPLDYGAMIQRTLGHLGCEIEIEPGRLISGNAGVLVAGVIYVKQGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND RP++Y A+H+I + D+VGP+CETGD A R + Sbjct: 301 DFLILDAAMNDLARPSMYGAHHDILPVTEAPPGTEMQPYDVVGPVCETGDSFAKGRALPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGAV + YNSR LIPE++V G + +IR R TF E++ D+IP W Sbjct: 361 LAEGDLVAFRSAGAYGAVMASEYNSRPLIPEVLVQGDHYAVIRARPTFDEILNRDTIPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|91227530|ref|ZP_01261867.1| diaminopimelate decarboxylase [Vibrio alginolyticus 12G01] gi|91188554|gb|EAS74846.1| diaminopimelate decarboxylase [Vibrio alginolyticus 12G01] Length = 417 Score = 319 bits (817), Expect = 6e-85, Method: Composition-based stats. Identities = 187/420 (44%), Positives = 260/420 (61%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE+V L+ LA TP Y YS +E+++ F +A +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAEDVPLQALAEQYGTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R +AA +++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSGGELERVIAAGGDPKKVVFSGVGKTPAEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGELGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y +A +LP + + G+D HIGSQ+ I+ F A L L L++ G NI+H+DVGGG Sbjct: 181 DVYKFAQSLPNLNVQGIDCHIGSQLTNIDPFIDATDRLLALIDDLKAQGINIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ GIL+T+V +K + K Sbjct: 241 LGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGILLTRVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + G+ D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVSPRKGEA--QTYDLVGPICETGDFLGKDRAL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + GAYG V S YN+R E+MV+G Q H++R R L +L+ +P Sbjct: 358 LQEGDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGKQSHLVRQREELTSLWQLEQILPE 417 >gi|254492286|ref|ZP_05105460.1| diaminopimelate decarboxylase [Methylophaga thiooxidans DMS010] gi|224462611|gb|EEF78886.1| diaminopimelate decarboxylase [Methylophaga thiooxydans DMS010] Length = 416 Score = 319 bits (816), Expect = 7e-85, Method: Composition-based stats. Identities = 187/416 (44%), Positives = 250/416 (60%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y +LHAENVS+ ++ TP Y YS + +++ F +AF +VCYA+K Sbjct: 1 MDYFQYQADTLHAENVSVTQITQQYGTPTYVYSRATLARHWKAFDDAFSNHAHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R +AA A + VFSGVGK +EI+ AL I Sbjct: 61 ANSNLAVLNVLARLGSGFDIVSAGELARVIAAGGEAAKTVFSGVGKNREEIEYALNQNIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL +N A L K AP++ RVNPD++A TH ISTG KE+KFGI I + Sbjct: 121 CFNVESIPELARINDVAAMLNKVAPVSIRVNPDVDAQTHPYISTGLKENKFGIAIEDART 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A + + + GVD HIGSQ+ + F A K + L +L +G I+H+D+GGGL Sbjct: 181 VYQSAKQMSNLNVVGVDCHIGSQLTTVSPFVDALKRVLTLIDELAEDGITIKHLDIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP+ ++YA + + +I+LEPGR + + GIL+T+V IK + K Sbjct: 241 GIHYRDE-TPPTPAEYAEALQPLLTDRDLEILLEPGRAIAGNAGILLTQVEFIKPTEAKQ 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY ++ E V D DIVGPICETGDF+ +R +A Sbjct: 300 FAIVDAAMNDLLRPALYQSWQE-IQPVMLNSDAEEATYDIVGPICETGDFLGKDRLLA-I 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L I GAYG S YNSR E+MV+G Q H++R R T + L + I Sbjct: 358 KQGDFLAIRSAGAYGFTMSSNYNSRPRAAEVMVDGDQVHLVRERETIESLYAGEHI 413 >gi|146305308|ref|YP_001185773.1| diaminopimelate decarboxylase [Pseudomonas mendocina ymp] gi|145573509|gb|ABP83041.1| diaminopimelate decarboxylase [Pseudomonas mendocina ymp] Length = 415 Score = 319 bits (816), Expect = 7e-85, Method: Composition-based stats. Identities = 193/416 (46%), Positives = 269/416 (64%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L LA TP Y YS IE Y +++A GM +VC+A+K Sbjct: 1 MEAFTYRDGELFAEGVALSALAQRFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA RIVFSGVGK+ D++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSSGELERVLAAGGEPSRIVFSGVGKSRDDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A LG KAP++ RVNPD++A TH ISTG KE+KFGI I Q + Sbjct: 121 CFNVESSVELERLQKVAAELGLKAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIEQAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LP +++ GVD HIGSQ+ +E F A L L +L + G +I+H+D+GGGL Sbjct: 181 VYARAAELPNLEVVGVDCHIGSQLTTLEPFLDALDRLLLLVDRLAARGIHIKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP + DY + + + ++ EPGRF+VA+ G+L+T+V +K + K Sbjct: 241 GVQYRDE-QPPLAGDYIAAVRKRLAGRDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ +++ + G+ H D+VGPICETGDF+A +R++ + Sbjct: 300 FAIIDAAMNDLIRPALYQAWMDVSPVQPRDGEARH--YDLVGPICETGDFLAKDRQL-VL 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G Q + +R R T QEL +S+ Sbjct: 357 EEGDLLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQAYEVRRRETVQELYAGESL 412 >gi|240138367|ref|YP_002962839.1| diaminopimelate decarboxylase [Methylobacterium extorquens AM1] gi|240008336|gb|ACS39562.1| diaminopimelate decarboxylase [Methylobacterium extorquens AM1] Length = 422 Score = 319 bits (816), Expect = 7e-85, Method: Composition-based stats. Identities = 224/421 (53%), Positives = 303/421 (71%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+V L LA V TPFYCYST +E++Y F+ AF G D +VC+A+K Sbjct: 1 MHHFHYRDGRLHAEDVDLTALAEDVGTPFYCYSTATLERHYRVFAEAFAGDDALVCFAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ TLAH G+G+DIVSEGELRRALAA VP ERIVFSGVGKT +E+ AL + I Sbjct: 61 ANSNQAVLATLAHQGAGMDIVSEGELRRALAAGVPGERIVFSGVGKTREEMAAALDANIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL L++ AV+ G+KAP++ RVNPD++A TH KISTGK ++KFGIPI + + Sbjct: 121 CFNVESEPELAALSEVAVARGRKAPVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG++I GVD HIGSQI + F A +LL +L + L ++GH + H+D GGGL Sbjct: 181 VYAGAARLPGLEIVGVDAHIGSQITDLTPFDNAARLLCELARDLLADGHRLHHVDFGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLI-HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP + I +F L + + E GR + + G+LVT+VI +K + +K Sbjct: 241 GIPYRDDNAPPPDPAALAAILRPHFKPLGLRPVFEIGRMIAGNAGVLVTRVIYVKPTDEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+A+H + + PA D + AD+VGP+CE+GD++AL R++ + Sbjct: 301 TFVIVDGAMNDLIRPTLYEAFHALRPVREPAPDTPRLTADVVGPVCESGDYLALGREMPM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDL+ + GAYGAVQ+ TYNSR L+PE++V G + ++RPR ++ +LI LD +P W Sbjct: 361 VAPGDLIAVMSAGAYGAVQACTYNSRRLVPEVLVTGDRSAVVRPRPSYDDLIRLDRLPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|254427501|ref|ZP_05041208.1| diaminopimelate decarboxylase [Alcanivorax sp. DG881] gi|196193670|gb|EDX88629.1| diaminopimelate decarboxylase [Alcanivorax sp. DG881] Length = 413 Score = 319 bits (816), Expect = 8e-85, Method: Composition-based stats. Identities = 181/416 (43%), Positives = 256/416 (61%), Gaps = 5/416 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y +G L AE + +E+LA TP Y YS A+E++YL F AF VCYA+K Sbjct: 1 MDPFQYRDGELFAEELPVEQLADRFGTPLYLYSRAALERHYLAFDEAFGDHPHQVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA G+G DIVS GEL R L A ++IVFSGVGKT DE+ AL++ I+ Sbjct: 61 ANSNLAVLNVLARCGAGFDIVSGGELERVLRAGGDPDKIVFSGVGKTADEMAAALKANIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A L ++APIA RVNPD++A TH ISTG K++KFG+ I + + Sbjct: 121 CFNVESAAELELLNLVAGELDREAPIAIRVNPDVDAQTHPYISTGLKDNKFGVDITKAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY A+ LP ++I G+D HIGSQ+ ++ F A + + L QL+ +G I H+D+GGGL Sbjct: 181 LYQRAAELPHIRILGIDCHIGSQLTKLAPFEDALERVLKLLAQLQEHGIEIHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P + + +EPGR + A+ G+ +T+V+ +K + K Sbjct: 241 GVTYDDE--TPPDRSAYVQALLKHIPGELPVHIEPGRSIAANAGLFITQVLFLKPTEHKN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP+LY A+ I + D DIVGP+CETGDF+ +R ++ Sbjct: 299 FAIVDGAMNDLIRPSLYSAWQNIVPVKPHDADCRE--WDIVGPVCETGDFLGKDRALS-L 355 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG + YNSR EIMV+G Q ++R R T+ + ++ +S+ Sbjct: 356 ETGDLLAVRSAGAYGFAMASNYNSRNRPAEIMVDGDQAFVVRQRETYDDQLKQESL 411 >gi|299132212|ref|ZP_07025407.1| diaminopimelate decarboxylase [Afipia sp. 1NLS2] gi|298592349|gb|EFI52549.1| diaminopimelate decarboxylase [Afipia sp. 1NLS2] Length = 421 Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats. Identities = 214/421 (50%), Positives = 289/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G LHAE+V +++LA V TPFYCYST +E++Y F+ AF G+DT+VCYA+K Sbjct: 1 MHHFHYRNGVLHAEDVDIDRLAEAVGTPFYCYSTATLERHYRVFAEAFAGLDTLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++TLA LG+G D+VS GEL RA AA +PA+RIVFSGVGKT E+ AL I Sbjct: 61 ANSNQSVLRTLARLGAGADVVSGGELMRARAAGIPADRIVFSGVGKTESELRQALAENIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVESE EL L++ A G A I+ R+NPDI A H KISTGK E+KFGIP+ + Sbjct: 121 CINVESEPELDLLSRIAHETGNTARISLRLNPDIGAGGHAKISTGKSENKFGIPLEGARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG++++GVDMHIGSQI + AF LL D + LR++GH I HID GGGL Sbjct: 181 VYARAAKLPGIRVTGVDMHIGSQITDLGPMESAFTLLVDFVRTLRADGHAIDHIDFGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 PP+ YA ++ + L C ++ EPGR +V + GILV++VI +K + Sbjct: 241 GIPYESDLPVPPAPDAYADVVKRVTRGLDCTLMFEPGRMIVGNAGILVSRVIYVKHGEAR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLY+A+H+I + + I AD+VGP+CETGD++AL R + Sbjct: 301 NFVIIDAAMNDLIRPTLYEAHHDIIPVREVSSPGDGIVADVVGPVCETGDYLALGRHLPA 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ + +GAYGAVQ+GTYN+R L+PE++V G Q+ ++RPR+ +LI +D I W Sbjct: 361 LKAGDLVAVMSSGAYGAVQAGTYNTRGLVPEVLVKGDQYAVVRPRIDPAQLIGMDRIAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|89074449|ref|ZP_01160926.1| putative diaminopimelate decarboxylase [Photobacterium sp. SKA34] gi|89049737|gb|EAR55287.1| putative diaminopimelate decarboxylase [Photobacterium sp. SKA34] Length = 416 Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats. Identities = 187/417 (44%), Positives = 258/417 (61%), Gaps = 4/417 (0%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y L AENV L +LA TP Y YS +E+++ F A ++CYA+ Sbjct: 1 MDYFNYQQNNQLWAENVPLAQLAEQYGTPLYVYSRATLERHWKAFDEAVATHPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS+GEL R +AA ++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNVLARLGSGFDIVSQGELERVIAAGGDPAKVVFSGVGKTAAEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNAVAEELGVTAPISLRINPDVDAKTHPYISTGLRDNKFGIVFDRAV 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A +LP +++ G+D HIGSQ+ I F A L L +L++ G +IQH+D+GGG Sbjct: 181 EVYRLAHSLPHLQVVGMDCHIGSQLTDITPFIDATDRLLALVDELKAEGIHIQHLDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y+ + P S ++L+ + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVTYNDEQPPQPSDYASALLARLENYPDLELIFEPGRAIAANAGVLLTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RPTLY A+ +I + G+ D+VGPICETGDFI +R + L Sbjct: 301 NFAIVDAAMNDLIRPTLYSAWQDIVPVSPRQGEA--HVYDLVGPICETGDFIGKDRSLCL 358 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL + GAYG V + YN+R EIMV+G Q H++R R T +L +L+ I Sbjct: 359 AQ-GDLLAVRSAGAYGFVMASNYNTRARAAEIMVDGEQAHVVRERETLTQLWQLEQI 414 >gi|90581046|ref|ZP_01236846.1| putative diaminopimelate decarboxylase [Vibrio angustum S14] gi|90437742|gb|EAS62933.1| putative diaminopimelate decarboxylase [Vibrio angustum S14] Length = 416 Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats. Identities = 186/417 (44%), Positives = 258/417 (61%), Gaps = 4/417 (0%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y L AENV L +LA TP Y YS +E+++ F A ++CYA+ Sbjct: 1 MDYFNYQQNNQLWAENVPLAQLAEQYGTPLYVYSRATLERHWKAFDEAVATHPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS+GEL R +AA ++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNVLARLGSGFDIVSQGELERVIAAGGDPAKVVFSGVGKTATEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNAVAEELGVTAPISLRINPDVDAKTHPYISTGLRDNKFGIVFDRAV 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A +LP +++ G+D HIGSQ+ I F A L L +L++ G +IQH+D+GGG Sbjct: 181 EVYRLAHSLPHLQVVGMDCHIGSQLTDISPFIDATDRLLALVDELKAEGIHIQHLDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y+ + P + ++L+ + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVTYNDEQPPQPADYASALLARLENYPDLELIFEPGRAIAANAGVLLTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RPTLY A+ +I + G+ D+VGPICETGDFI +R + L Sbjct: 301 NFAIVDAAMNDLIRPTLYSAWQDIVPVSPRQGEA--HVYDLVGPICETGDFIGKDRSLCL 358 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL + GAYG V + YN+R EIMV+G Q H++R R T +L +L+ I Sbjct: 359 AQ-GDLLAVRSAGAYGFVMASNYNTRARAAEIMVDGEQAHVVRERETLTQLWQLEQI 414 >gi|253702729|ref|YP_003023918.1| diaminopimelate decarboxylase [Geobacter sp. M21] gi|251777579|gb|ACT20160.1| diaminopimelate decarboxylase [Geobacter sp. M21] Length = 417 Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats. Identities = 182/420 (43%), Positives = 261/420 (62%), Gaps = 3/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L AE+V+++ + V +P Y YS +E++Y +AF +CY++K Sbjct: 1 MHHFQYKGEELFAEDVAIKDIVAAVGSPVYIYSKATLERHYKAMDDAFAQAPHTICYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+KT +LG G+DIVS GEL RALAA V +++V+SGVGK +EI AL+SGI Sbjct: 61 ANSNLAVLKTFVNLGGGVDIVSGGELYRALAAGVDPKKVVYSGVGKRDEEIAYALESGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN+ESE EL +++ A +G+KA IA RVNPD++ TH I+TG K+ KFGI I + Sbjct: 121 MFNIESEQELDRISEVAGRIGRKAGIAIRVNPDVDPQTHPYITTGLKKAKFGINIERALE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A L ++I G+D HIGSQ+ ++ F A K L+ L + +R G +++++D+GGGL Sbjct: 181 QYQRAKGLADIEILGIDCHIGSQLTKVSPFVDAIKKLKRLLEGVRGMGIDVRYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP +DY S I + +L +I EPGR LV + GILV K + KK +K Sbjct: 241 GIQYDDE-APPLPADYGSSIQEETKDLGLHLIFEPGRNLVGNAGILVGKCLYTKKGEEKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D MND RP LY ++H + ++ + DIVGPICE+GDF+ R+I Sbjct: 300 FVIVDAGMNDLARPALYGSFHGVRPVLRNQDGVIEG--DIVGPICESGDFLVKEREIPNF 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 R GDL+ GAYG S YNSR E+MV+G +F ++R R ++LI + +P++L Sbjct: 358 RQGDLIAFMSAGAYGFTMSSNYNSRPRAAEVMVDGDKFEVVRDREKLEDLIRGERVPSFL 417 >gi|152977874|ref|YP_001343503.1| diaminopimelate decarboxylase [Actinobacillus succinogenes 130Z] gi|150839597|gb|ABR73568.1| diaminopimelate decarboxylase [Actinobacillus succinogenes 130Z] Length = 415 Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 261/416 (62%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L+AE+ + +LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MDFFHYKNHKLYAEDCEITQLAEQFGTPLYVYSKATLERHWHAFDDAFGDYPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV++T+A LGSG DIVS+GEL R LAA ++VFSGV KT EI AL+ GI Sbjct: 61 SNSNIAVLQTMARLGSGFDIVSQGELERVLAAGGDPGKVVFSGVAKTETEITRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNVESIPELYRINEVAGKLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVDQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP + ++G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYRRAAELPHIAVTGMDCHIGSQLTELQPFLDAADRLVVLMEQLKQDGVQLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y S+ PP +DYA+ + Q +IILEPGR + A+ G+LVTKV +K + Sbjct: 241 GVTY-SNETPPHPTDYATALLQKLQAYNLEIILEPGRAICANAGVLVTKVEYLKSNETHN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY + R D+VGPICET DF+ R++A Sbjct: 300 FAIVDAGMNDMIRPALYEAYM-NIIEADRTLPRAKAVYDVVGPICETSDFLGKKRELA-I 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L GAYGA S YNSR E+MV+G + +IR R ++Q L +L+++ Sbjct: 358 AAGDYLVQRSAGAYGASMSSNYNSRPRTAEVMVDGDKAFLIRRRESYQNLWQLENL 413 >gi|91776793|ref|YP_546549.1| diaminopimelate decarboxylase [Methylobacillus flagellatus KT] gi|91710780|gb|ABE50708.1| diaminopimelate decarboxylase [Methylobacillus flagellatus KT] Length = 445 Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats. Identities = 194/415 (46%), Positives = 263/415 (63%), Gaps = 2/415 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + F+ G LHAENV L ++A TP Y YS A+E Y F+ FDG D +VC+A+K+ Sbjct: 31 NPFQLKNGILHAENVPLTRIADEFGTPTYVYSRAALESAYTRFAAGFDGQDHLVCFAVKS 90 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N + AV+ A LG+G DIVS GEL R LAA ++VFSGVGKT E++ AL +GI+C Sbjct: 91 NPSLAVLNLFARLGAGFDIVSGGELARVLAAGGDPAKVVFSGVGKTETEMETALNAGIFC 150 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVES SEL LN A LGK AP++ RVNP+++A TH ISTG K +KFG+ +L Sbjct: 151 FNVESASELDRLNDVAGRLGKTAPVSLRVNPNVDAKTHPYISTGLKNNKFGVAYEDAFNL 210 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y +A++LP + + GVD HIGSQ+ ++ F AF + L QL + G + HID+GGG+G Sbjct: 211 YQHAASLPNIAVHGVDCHIGSQLTELSPFMDAFDRVLALVDQLEAEGIRVAHIDLGGGIG 270 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 I Y + PP + YA+ + Q G+ + K++ EPGR LV + G L+TKV +K + K F Sbjct: 271 ICYADE-TPPDFAAYAAAMLQKLGDRKVKLVFEPGRALVGNAGALITKVEYLKHTEAKNF 329 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 I+D AMND MRP LYDAYHEI +V +IVGP+CE+GDF+ +RK+A + Sbjct: 330 AIVDAAMNDLMRPALYDAYHEIAAVVPATDPSSAQVYEIVGPVCESGDFLGHDRKLA-LQ 388 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG S YN+R E+MV+G + H+IR R T +L L+ I Sbjct: 389 QGDLLAVLSAGAYGMSMSSNYNTRPRAAEVMVDGDKTHLIRERETVAQLFALEKI 443 >gi|197120414|ref|YP_002140841.1| diaminopimelate decarboxylase [Geobacter bemidjiensis Bem] gi|197089774|gb|ACH41045.1| diaminopimelate decarboxylase [Geobacter bemidjiensis Bem] Length = 417 Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 184/420 (43%), Positives = 259/420 (61%), Gaps = 3/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L AE+V+++ + V +P Y YS +E++Y +AF +CY++K Sbjct: 1 MHHFQYKGEELFAEDVAIKDIVAAVGSPVYIYSKATLERHYKAMDDAFAQAPHTICYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+KT +LG G+DIVS GEL RALAA V +++V+SGVGK DEI AL+SGI Sbjct: 61 ANSNLAVLKTFINLGGGVDIVSGGELYRALAAGVDPKKVVYSGVGKRDDEIAYALESGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN+ESE EL ++ A +GKKA IA RVNPD++ TH I+TG K+ KFGI I + Sbjct: 121 MFNIESEQELDRISDIAGRIGKKAGIAIRVNPDVDPQTHPYITTGLKKAKFGINIERALE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A L ++I G+D HIGSQ+ ++ F A K L+ L +R G +I+++D+GGGL Sbjct: 181 QYQRAKGLANIEILGIDCHIGSQLTKVSPFVDAIKKLKRLLDGVRGMGIDIKYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP +DY S I + +L +I EPGR LV + GILV K + KK +K Sbjct: 241 GIQYDDE-APPLPADYGSSIQEETKDLGLHLIFEPGRNLVGNAGILVGKCLYTKKGEEKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D MND RP+LY ++H + + + DIVGPICE+GDF+ R+I Sbjct: 300 FVIVDAGMNDLARPSLYGSFHGVRPVFRNQDGVIEG--DIVGPICESGDFLVKEREIPNF 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 R GDL+ GAYG S YNSR E+MV+G +F ++R R ++L+ + +P++L Sbjct: 358 RQGDLIAFMSAGAYGFTMSSNYNSRPRAAEVMVDGGKFEVVRDREKLEDLVRGERVPSFL 417 >gi|254230109|ref|ZP_04923505.1| diaminopimelate decarboxylase [Vibrio sp. Ex25] gi|262392884|ref|YP_003284738.1| diaminopimelate decarboxylase [Vibrio sp. Ex25] gi|151937354|gb|EDN56216.1| diaminopimelate decarboxylase [Vibrio sp. Ex25] gi|262336478|gb|ACY50273.1| diaminopimelate decarboxylase [Vibrio sp. Ex25] Length = 417 Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 186/420 (44%), Positives = 259/420 (61%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE+V L+ LA TP Y YS +E+++ F +A +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAEDVPLQALAEQYGTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS GEL R +AA +++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGDPKKVVFSGVGKTPAEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGELGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y +A +LP + + G+D HIGSQ+ I+ F A L L L++ G NI+H+DVGGG Sbjct: 181 DVYKFAQSLPNLNVQGIDCHIGSQLTNIDPFIDATDRLLALIDDLKAQGINIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ GIL+T+V +K + K Sbjct: 241 LGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGILLTRVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + G+ D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVSPRTGEA--QTYDLVGPICETGDFLGKDRAL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + GAYG V S YN+R E+MV+G Q H++R R L +L+ +P Sbjct: 358 LQEGDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGKQSHLVRQREELTSLWQLEQILPE 417 >gi|254438389|ref|ZP_05051883.1| diaminopimelate decarboxylase [Octadecabacter antarcticus 307] gi|198253835|gb|EDY78149.1| diaminopimelate decarboxylase [Octadecabacter antarcticus 307] Length = 421 Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 209/421 (49%), Positives = 292/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L AE+V++ ++A V TPFY YST + +++ F +A GMD ++C+A+K Sbjct: 1 MDHFLYRDGQLMAEDVTIAEIAAQVGTPFYVYSTATLLRHFQLFDDALAGMDHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN AV+K L G+G+D+VS GE RA AA V +RIVFSG+GKT +E+ LAL GI Sbjct: 61 SLSNVAVLKLLGDAGAGMDVVSGGEYLRAKAAGVSGDRIVFSGIGKTREEMRLALVGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E++ L++ A+SLGK API RVNPD++A TH KISTGKKEDKFGIPI + Sbjct: 121 QFNVESEPEMEVLSEVAMSLGKIAPITVRVNPDVDAKTHAKISTGKKEDKFGIPISRARD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+KI G+D+HIGSQ+ ++E F A++ + +LT+QLRS+GH+I +D+GGGL Sbjct: 181 VYAMAAKLPGLKIIGIDVHIGSQLTELEPFRLAYRKVAELTEQLRSDGHDISRLDLGGGL 240 Query: 241 GIAY-HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y ++ PP +Y +LI + G+L C+I +EPGR + + G+LV KVI +K D+ Sbjct: 241 GIPYARDNNAPPLPIEYGALIKEEVGHLGCEIEIEPGRLISGNAGLLVAKVIYVKSGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RP +YDA+H+I ++ A D+VGPICE+GD A R + Sbjct: 301 EFLIVDAAMNDLIRPAMYDAWHDIVPVIESAAGVEQTPYDVVGPICESGDTFAKGRMLPT 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + L+ GAY AV S YNSR LIPE++VNG QF +IR R TF+++I D+IP W Sbjct: 361 LQSEALVGFRSAGAYSAVMSSEYNSRPLIPEVLVNGDQFAVIRRRPTFEDMINRDTIPEW 420 Query: 420 L 420 + Sbjct: 421 M 421 >gi|262172884|ref|ZP_06040562.1| diaminopimelate decarboxylase [Vibrio mimicus MB-451] gi|261893960|gb|EEY39946.1| diaminopimelate decarboxylase [Vibrio mimicus MB-451] Length = 417 Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 183/420 (43%), Positives = 254/420 (60%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE V L LA+ TP Y YS +E+++ F + ++CYA+ Sbjct: 1 MDYFNYQDDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R LAA ++VFSGVGKT E+ ALQ I Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL LN+ A LG KAPI+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESERELHRLNKVAAELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A +LP + + G+D HIGSQ+ + F A L L L++ G +I+H+DVGGG Sbjct: 181 EVYRLAHSLPHLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+LVTKV +K + K Sbjct: 241 LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RP LY A+ +I + G+ D+VGP+CET DF+ +R + + Sbjct: 301 NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEA--QTYDLVGPVCETSDFLGKDRDL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 GDLL + +GAYG S YNSR + E+MV+G++ H++R R T L L+ +P Sbjct: 358 LEEGDLLAVRSSGAYGFTMSSNYNSRPRVAEVMVDGNKAHLVRQRETLSSLWALESVLPE 417 >gi|15603289|ref|NP_246363.1| hypothetical protein PM1424 [Pasteurella multocida subsp. multocida str. Pm70] gi|12721800|gb|AAK03508.1| LysA [Pasteurella multocida subsp. multocida str. Pm70] Length = 416 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 262/416 (62%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y + L AE V ++ +A TP Y YS +E+++ F+NA ++C+A+K Sbjct: 1 MDYFQYQQAQLMAEQVPVKHIAQQYGTPLYIYSRATLERHWHAFNNALGDHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N N A++ +A LGSG DIVS+GEL R LAA +IVFSGV KT EI AL+ GI Sbjct: 61 SNPNIAILNIMARLGSGFDIVSQGELERVLAAGGEPSKIVFSGVAKTETEIARALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL +NQ A +GK API+ RVNPD++A TH ISTG KE+KFGI + + + Sbjct: 121 CFNVESVAELYRINQVAGEMGKTAPISLRVNPDVDARTHPYISTGLKENKFGISVAEARN 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP ++I+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYQLANQLPHIQITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKQDGIQLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y +++ P S ++L+ + + +IILEPGR + A+ GILVTKV +K + D+ Sbjct: 241 GVPYTNENPPHPSEYASALLDKLKAYHELEIILEPGRAITANAGILVTKVEYLKHNEDRH 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY AY I + R D+VGPICET DF+ R++A Sbjct: 301 FAIVDAGMNDMIRPALYQAYMNIIEVDRTLT-RDKAVYDVVGPICETSDFLGKQRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L GAYGA S YNSR E+MV+G Q H+IR R T +EL L+ + Sbjct: 359 AAGDYLAQRSAGAYGASMSSNYNSRSRTAEVMVDGDQVHLIRRRETLEELWALERL 414 >gi|220919297|ref|YP_002494601.1| diaminopimelate decarboxylase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957151|gb|ACL67535.1| diaminopimelate decarboxylase [Anaeromyxobacter dehalogenans 2CP-1] Length = 427 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 183/431 (42%), Positives = 255/431 (59%), Gaps = 9/431 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+ G LHAE V +E+LA TP Y YST + +++ + G+D +VCYA+K Sbjct: 1 MNHFQRKRGVLHAEAVPVEELARAYGTPLYVYSTATLTRHWKVLHRSLAGLDHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ A LGSG DIVS GEL R L A ++VFSGVGK DE+ AL+SG+ Sbjct: 61 ANSNLAVLSLFARLGSGFDIVSGGELYRVLKAGGHPGKVVFSGVGKRDDEVAFALESGVK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 NVES EL ++ A +G +AP+A RVNPD++ TH ISTG E+KFG+ + + Sbjct: 121 VLNVESAPELARISIVARRMGLRAPVALRVNPDVDPKTHPYISTGLSENKFGVSVDEARR 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA A+ P +++ GV HIGSQI + F A + L + L G + H+DVGGGL Sbjct: 181 LYALAAQDPALEVRGVACHIGSQITTVRPFLDAIARVLSLVKDLGKQGIRLGHVDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + P +Y I + +++LEPGR LV + G+LVT+V+ +K+S K Sbjct: 241 GITYADEEP-PHPDEYGRAIKKALSRFDGEVMLEPGRVLVGNAGVLVTRVLHVKESGRKV 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV++D AMND +RP+ YDA+HEI P D I D+VGPICE+ DF+A R++ P Sbjct: 300 FVVVDAAMNDLVRPSYYDAHHEIEPAGAPRKDAEEIVCDVVGPICESSDFLARKRRMPRP 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 GDLL + GAYG S YNSR E++V+G + R R T+ +L+ + Sbjct: 360 VRGDLLVVRSAGAYGFAMSSNYNSRPRAAEVLVDGDGARLARRRETYADLVRGE------ 413 Query: 421 QKTPKQSSENY 431 TP+ +E + Sbjct: 414 --TPEPEAERF 422 >gi|28899758|ref|NP_799363.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus RIMD 2210633] gi|153838760|ref|ZP_01991427.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AQ3810] gi|260365174|ref|ZP_05777739.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus K5030] gi|260878126|ref|ZP_05890481.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AN-5034] gi|260895817|ref|ZP_05904313.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus Peru-466] gi|260900850|ref|ZP_05909245.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AQ4037] gi|28808010|dbj|BAC61247.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus RIMD 2210633] gi|149747846|gb|EDM58730.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AQ3810] gi|308087170|gb|EFO36865.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus Peru-466] gi|308092764|gb|EFO42459.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AN-5034] gi|308110594|gb|EFO48134.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AQ4037] gi|308111029|gb|EFO48569.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus K5030] gi|328472415|gb|EGF43281.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus 10329] Length = 417 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 187/420 (44%), Positives = 261/420 (62%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE+V L+ LA TP Y YS +E+++ F +A +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAEDVPLQALAEQYGTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS GEL R +AA A+++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGDAKKVVFSGVGKTPAEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGELGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y +A +LP + + G+D HIGSQ+ I+ F A L L L++ G NI+H+DVGGG Sbjct: 181 EVYQFAQSLPNLNVQGIDCHIGSQLTSIDPFIDATDRLLALIDDLKAQGINIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ GIL+T+V +K + K Sbjct: 241 LGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGILLTRVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + G+ D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVSPRNGEP--QTYDLVGPICETGDFLGKDRAL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + GAYG V S YN+R E+MV+G+Q H++R R L +L+ +P Sbjct: 358 LQEGDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGNQSHLVRQREELTSLWQLEQILPE 417 >gi|163869282|ref|YP_001610538.1| hypothetical protein Btr_2591 [Bartonella tribocorum CIP 105476] gi|161018985|emb|CAK02543.1| Diaminopimelate decarboxylase [Bartonella tribocorum CIP 105476] Length = 424 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 224/422 (53%), Positives = 299/422 (70%), Gaps = 1/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y +G LHAE SL LA V TPFYCYS A+ + + AF GM T++ YA+K Sbjct: 1 MNFFPYHQGMLHAEGCSLTDLAQEVGTPFYCYSANALVTRFKDYQKAFQGMPTLIAYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQA+++ LA G+G D+VSEGELRRALA +PA RIV+SGVGKT+ EID AL IY Sbjct: 61 ANSNQAILRLLAANGAGADVVSEGELRRALAVGIPAHRIVYSGVGKTVREIDFALSQNIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+QRAV+L K A ++ R+NPD++A THKKI+TGK E+KFGIP+ Sbjct: 121 CFNVESEPELEQLSQRAVALSKTARVSLRINPDVDAKTHKKITTGKSENKFGIPLFLARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A++LPG+++ G+DMHIGSQI ++ F +AF L+ D +QL S+G I HID+GGGL Sbjct: 181 AYKKAASLPGLQVCGIDMHIGSQICDLKPFEEAFLLIADCVRQLWSDGCAITHIDIGGGL 240 Query: 241 GI-AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI H PS DYA+L+ ++ L I++EPGR +V G+LVT V+ +KK + Sbjct: 241 GIAYGCEQHTLPSPFDYAALVKKHIAPLGIDIVVEPGRSIVGQAGVLVTSVLYLKKGQGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND MRPTLYDA+ + + A D I ADIVG +CETGD++AL+R + + Sbjct: 301 NFVIVDAAMNDLMRPTLYDAWQNVVLVKQAAKDAPLIRADIVGSVCETGDYLALDRCLPI 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDLL I + GAYGAV + TYNSRLLIPE++V +++ +IRPR+ + +L+E D IP W Sbjct: 361 LAPGDLLAITQAGAYGAVMASTYNSRLLIPEVLVQDTRYAVIRPRLDYAQLMECDHIPDW 420 Query: 420 LQ 421 ++ Sbjct: 421 VE 422 >gi|325271631|ref|ZP_08138133.1| diaminopimelate decarboxylase [Pseudomonas sp. TJI-51] gi|324103235|gb|EGC00580.1| diaminopimelate decarboxylase [Pseudomonas sp. TJI-51] Length = 415 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 264/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+AF Y +G L AE V+L +A TP Y YS IE Y ++++A G + +VC+A+K Sbjct: 1 MNAFNYRDGELFAEGVALSAIAERHGTPTYVYSRAHIEAQYRSYTDALQGAEHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA A+R+VFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L A +GK AP++ RVNPD++A TH ISTG KE+KFGI I + Sbjct: 121 CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP +++ GVD HIGSQ+ I+ F A L L +L G +++H+D+GGG+ Sbjct: 181 IYVRAAQLPNLEVVGVDCHIGSQLTTIDPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP +DY I + G+ ++ EPGR++VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-QPPLVADYIKAIRERVGDRDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + G+ D+VGPICETGDF+ +R + Sbjct: 300 FAIIDAAMNDLIRPALYQAWMGVSAVKPRGGEGR--AYDLVGPICETGDFLGKDRVL-DL 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL +E GAYG V S YN+R EI+V+G Q +R R T EL +S+ Sbjct: 357 AEGDLLAVESAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETIAELYAGESL 412 >gi|313501204|gb|ADR62570.1| LysA_2 [Pseudomonas putida BIRD-1] Length = 415 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 187/416 (44%), Positives = 264/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+AF Y +G L AE V+L +A TP Y YS IE Y ++++A G + +VC+A+K Sbjct: 1 MNAFNYRDGELFAEGVALSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA A+R+VFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L A +GK AP++ RVNPD++A TH ISTG KE+KFGI I + Sbjct: 121 CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP +++ GVD HIGSQ+ +E F A L L +L G +++H+D+GGG+ Sbjct: 181 IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP +DY I + G ++ EPGR++VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-QPPQVADYIKAIRERVGERDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + AG+ D+VGPICETGDF+ +R + Sbjct: 300 FAIIDAAMNDLIRPALYQAWMGVSAVKPRAGEGR--AYDLVGPICETGDFLGKDRVLN-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL +E GAYG V S YN+R EI+V+G Q +R R T EL +S+ Sbjct: 357 AEGDLLAVESAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETVAELYAGESL 412 >gi|226938955|ref|YP_002794026.1| DcdA [Laribacter hongkongensis HLHK9] gi|226713879|gb|ACO73017.1| DcdA [Laribacter hongkongensis HLHK9] Length = 417 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 179/415 (43%), Positives = 255/415 (61%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+AF Y L E++ L ++A TP Y Y+ +A+ + Y +SNAF GM +VCYALK Sbjct: 1 MNAFHYQNRELCVEDIPLARIAEQYGTPCYVYAESALTQAYSAYSNAFAGMPHLVCYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN +VI+ A LG+G D VS GE+ R LAA A +IVFSGVGK+ E+ AL+ GI+ Sbjct: 61 ANSNLSVIRHFASLGAGFDTVSIGEIERVLAAGGEAGKIVFSGVGKSAAEMRRALEIGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ L+ A LGK+AP++ R+NP+++A TH ISTG K +KFGI Sbjct: 121 CFNVESVNELERLDTVARELGKRAPVSLRINPNVDARTHPYISTGLKNNKFGIAYDIARQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A+ LP + + G+D HIGSQ+ A L L QL +G ++H+D+GGGL Sbjct: 181 SYRRAAELPNLDVIGIDCHIGSQLTDSTPLIDALDRLLVLVDQLSEDGIRLRHVDIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP YA I + +++EPGR LV + G+L+T+V +K+ K Sbjct: 241 GIRYADE-TPPDLQQYADAIRERLAGRDLALLMEPGRSLVGNAGVLLTRVEYLKEGDGKH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND MRP+ Y A+H+I + + L D+VGPICE+ DF+ +R +A Sbjct: 300 FAVVDAAMNDLMRPSYYQAFHDIRPVTQHDAELLPALYDVVGPICESSDFLGKDRALA-L 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 R GDL+ + +GAYG+ S YN+R E++VNG ++R R TF++LI + Sbjct: 359 REGDLIAVMSSGAYGSTMSSNYNTRPRAAEVLVNGRHVRLVRARETFEQLIANEI 413 >gi|145634864|ref|ZP_01790572.1| diaminopimelate decarboxylase [Haemophilus influenzae PittAA] gi|145268030|gb|EDK08026.1| diaminopimelate decarboxylase [Haemophilus influenzae PittAA] Length = 415 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 185/415 (44%), Positives = 264/415 (63%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKHNKLYAEDIPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ + + Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVDEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I +R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIIEIDRTL-EREKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD + GAYGA S YNSR E++V+G Q ++IR R T QEL L+S Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRPRTAEVLVDGDQSYLIRRRETLQELWALES 413 >gi|26991903|ref|NP_747328.1| diaminopimelate decarboxylase [Pseudomonas putida KT2440] gi|24987026|gb|AAN70792.1|AE016723_4 diaminopimelate decarboxylase [Pseudomonas putida KT2440] Length = 415 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 187/416 (44%), Positives = 264/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+AF Y +G L AE V+L +A TP Y YS IE Y ++++A G + +VC+A+K Sbjct: 1 MNAFNYRDGELFAEGVALSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA A+R+VFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L A +GK AP++ RVNPD++A TH ISTG KE+KFGI I + Sbjct: 121 CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP +++ GVD HIGSQ+ +E F A L L +L G +++H+D+GGG+ Sbjct: 181 IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP +DY I + G ++ EPGR++VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-QPPRVADYIKAIRERVGERDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + AG+ D+VGPICETGDF+ +R + Sbjct: 300 FAIIDAAMNDLIRPALYQAWMGVSAVKPRAGEGR--AYDLVGPICETGDFLGKDRVLN-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL +E GAYG V S YN+R EI+V+G Q +R R T EL +S+ Sbjct: 357 AEGDLLAVESAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETVAELYAGESL 412 >gi|90426344|ref|YP_534714.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisB18] gi|90108358|gb|ABD90395.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisB18] Length = 421 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 218/421 (51%), Positives = 294/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G LHAE V+L LA V TPFYCYST +E++Y FS AF G+D +VCYA+K Sbjct: 1 MHHFDYRNGVLHAEAVNLSSLADAVGTPFYCYSTATLERHYRVFSEAFAGVDALVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++TLA LG+G D+VS GEL+RA+AA +P ++I+FSGVGKT E+ AL I Sbjct: 61 ANSNQSVLRTLAKLGAGADVVSGGELQRAVAAGIPPQKILFSGVGKTATELRAALAHDIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVESE EL+ L++ A +G+ A I+ RVNPD+++ +H KISTGK E+KFGIPI + Sbjct: 121 CINVESEPELELLSRIASEMGRTARISVRVNPDVDSGSHAKISTGKSENKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+K++GVDMHIGSQI + AF+LL D LR +GH I H+D GGGL Sbjct: 181 VYARAAKLPGLKVTGVDMHIGSQITDLAPLEVAFRLLADFVTVLRGDGHTISHVDFGGGL 240 Query: 241 GIAYHSDH-RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y + PP YA+++ + NL C ++ EPGR +V + GILV +V +K+ K Sbjct: 241 GIPYFEEPGVPPEPQAYAAMVKRVTHNLGCTLMFEPGRLIVGNAGILVARVTYVKRGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLY+AYH+I + A I AD+VGP+CE+GD++AL+R + Sbjct: 301 NFVIIDAAMNDLIRPTLYEAYHDILPVQQAAPGSRDIVADVVGPVCESGDYLALDRSMPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ I GAYGAVQ+ TYN+R L+PE++V G + ++RPR+ ++LI LD W Sbjct: 361 PAPGDLIAIMTAGAYGAVQACTYNTRALVPEVLVKGDNYAVVRPRVDVEQLIALDQPAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|261495167|ref|ZP_05991630.1| diaminopimelate decarboxylase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309143|gb|EEY10383.1| diaminopimelate decarboxylase [Mannheimia haemolytica serotype A2 str. OVINE] Length = 416 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 193/416 (46%), Positives = 268/416 (64%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L AE V++ + TP Y YS + +E++ F+NAF +VC+A+K Sbjct: 1 MNHFEYKNNQLFAEEVAIADIIEQYGTPAYVYSRSTLERHLHAFNNAFGSHPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGEASKVVFSGVAKSHSEIKRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES SEL +NQ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNIESVSELHRINQVAGELGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A TLP VKI+G+D HIGSQ+ +++ F A L L +QLR +G + H+D+GGGL Sbjct: 181 VYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLIILMEQLREDGIELHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P + +L+ + G +II+EPGR + A+ GILVTKV +K++ D+ Sbjct: 241 GVPYNGEEPPHPTEYAKALLEKLKGYENLEIIIEPGRAITANAGILVTKVEYLKQNEDRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY +I + R D+VGPICET DF+ R++A Sbjct: 301 FAIVDTGMNDMIRPALYEAYMQITEVDKTLN-RDKAVYDVVGPICETSDFLGKQRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ I GAYGA S TYNSR EIMV+G+Q H+I+ R TF +L L+ + Sbjct: 359 SEGDLIAIRSAGAYGAAMSSTYNSRPQAAEIMVDGNQAHLIKARATFADLWRLEKL 414 >gi|117927014|ref|YP_867631.1| diaminopimelate decarboxylase [Magnetococcus sp. MC-1] gi|117610770|gb|ABK46225.1| diaminopimelate decarboxylase [Magnetococcus sp. MC-1] Length = 419 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 173/416 (41%), Positives = 254/416 (61%), Gaps = 1/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + L E V+LE++A V TPFYCYS + + F AF D+++CY++K Sbjct: 1 MDYFHYQDDQLFCEEVALEQIAQAVGTPFYCYSERTLLHHLQVFQQAFASQDSLICYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA G+G DIVS GEL R P ER+VFSGVGK+ EI AL G+ Sbjct: 61 ANSNLAVLDALAKQGAGFDIVSGGELERVRRVGCPGERVVFSGVGKSRAEIQAALAYGVR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ + + A+++ AP+ R+NPD++ TH ISTG K +KFGIP + + Sbjct: 121 MFNVESIPELQRIQEVALAMDVAAPVTLRINPDVDPKTHPYISTGLKRNKFGIPFGEAVA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ + V++ G+D HIGSQ+ Q+ F A K + L Q L+ +G I+++D+GGGL Sbjct: 181 VYQQAAQMSHVQVVGLDCHIGSQLTQLSPFVDALKRVMVLIQALKGHGIEIKNLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y PPS ++ A+ + + + +ILEPGR +V + G+LVT+V +KK + Sbjct: 241 GIPYEDGDTPPSPAELAAALLEQLDGMPVTVILEPGRAIVGNAGVLVTRVEYVKKGEQRH 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI D MND +RP +Y+ + + DR D+VGPICETGDF A +R ++ Sbjct: 301 FVITDAGMNDLLRPAIYN-AYHGVIPLQRKFDREEQVVDVVGPICETGDFFARDRYLSEV 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 G+LL + GAYG V S YN+R + E++V G ++ ++R R + +L+E +S+ Sbjct: 360 YQGELLAVRSAGAYGFVMSSNYNTRPRVAEVLVRGDRYAVVRKRESVAQLLENESL 415 >gi|229845773|ref|ZP_04465885.1| diaminopimelate decarboxylase [Haemophilus influenzae 7P49H1] gi|229810777|gb|EEP46494.1| diaminopimelate decarboxylase [Haemophilus influenzae 7P49H1] Length = 415 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 185/415 (44%), Positives = 265/415 (63%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKNNKLYAEDIPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ +++ Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I +R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIVEIDRTL-EREKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD + GAYGA S YNSR E++V+G Q ++IR R T QEL L+S Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRARTAEVLVDGDQSYLIRRRETLQELWALES 413 >gi|90420245|ref|ZP_01228153.1| diaminopimelate decarboxylase [Aurantimonas manganoxydans SI85-9A1] gi|90335579|gb|EAS49329.1| diaminopimelate decarboxylase [Aurantimonas manganoxydans SI85-9A1] Length = 424 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 225/421 (53%), Positives = 305/421 (72%), Gaps = 2/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+ +G LHAE+VS+E +AH V TPFYCYST + ++Y F+ AF +D +VCYA+K Sbjct: 1 MNHFEIRDGVLHAEDVSVETIAHDVGTPFYCYSTATLTRHYTVFAEAFADIDALVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTLA LG+G D+VS GEL RAL A +PAE+I+FSGVGK++ EIDLAL SGI+ Sbjct: 61 ANSNQAVLKTLAALGAGADVVSGGELLRALRAGIPAEKIMFSGVGKSVPEIDLALASGIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ESE EL+ + RAV+ G+ A ++FR+NPD++A TH KISTGKK DKFGI + + Sbjct: 121 CFNIESEPELEMIAARAVAAGRTAHVSFRINPDVDARTHAKISTGKKSDKFGIAYERAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A +LPG+ +SG+DMHIGSQI ++E F +AF+ L L ++LR GH+I H+D+GGGL Sbjct: 181 VYDRARSLPGIAVSGIDMHIGSQIVELEPFDQAFERLAGLVRRLRGAGHDIAHVDLGGGL 240 Query: 241 G-IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 G ++ PP+ YA ++ ++ +L CK++ EPGR + A+ GILVT+V+ +K++ K Sbjct: 241 GVPYSRTNTPPPAPPAYAEIVKRHVRDLDCKVVFEPGRLIAANAGILVTRVVYVKEAEGK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D MND +RPTLYD + V D + AD+VGP+CE+GD+ A R I Sbjct: 301 TFVIVDAGMNDLIRPTLYD-AWHDIHPVIDDPDAPRLVADVVGPVCESGDYFARARDIPA 359 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+Y+ GAYGAVQSGTYNSR LI E++V G FH IRPR T E+I LD +P W Sbjct: 360 VKAGDLVYLSSAGAYGAVQSGTYNSRPLIAEVLVKGDAFHAIRPRQTIDEMIALDRLPPW 419 Query: 420 L 420 L Sbjct: 420 L 420 >gi|121602458|ref|YP_988394.1| diaminopimelate decarboxylase [Bartonella bacilliformis KC583] gi|120614635|gb|ABM45236.1| diaminopimelate decarboxylase [Bartonella bacilliformis KC583] Length = 424 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 216/423 (51%), Positives = 297/423 (70%), Gaps = 1/423 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y +G LHAE +SL LA V TPFYCYS+ A+ ++ + AF M +++ YA+K Sbjct: 1 MNFFSYHQGELHAEGLSLSTLAKDVGTPFYCYSSGALVAHFKEYQEAFHDMPSLIAYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++ LA G+G D+VSEGELRRALA + +RIV+SGVGKT+ EID AL I+ Sbjct: 61 ANSNQAVLRILAAKGAGADVVSEGELRRALAVGITPQRIVYSGVGKTVREIDFALSQDIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+L K A I+ R+NPD++A THKKI+TG+ ++KFGIP+ S Sbjct: 121 CFNVESEPELEQLSARAVALSKTARISLRINPDVDAKTHKKITTGRFDNKFGIPLSLACS 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A+ LPG+++ G+DMHIGSQI ++ F AF + D + L G+ I HID+GGGL Sbjct: 181 AYKKAAQLPGLQVRGMDMHIGSQICDLKPFEDAFLIAADFVRHLWREGYAITHIDIGGGL 240 Query: 241 GIAYHSDHRP-PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI+YH + PS +DYA+L+ ++ L IILEPGR + G+LVT VI +K+ + Sbjct: 241 GISYHPEQNMVPSPADYAALVRKHIAPLGINIILEPGRSIAGHAGVLVTSVIYLKRGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV++D AMNDF+RPTLYDA+ + + D I ADIVGP+CETGD++ LNR + + Sbjct: 301 NFVVVDGAMNDFLRPTLYDAWQTVVPVKKAPEDAPLIMADIVGPVCETGDYLGLNRSLPM 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDLL I GAYGAV + TYNSRLL+PEI+V +++ +IRPR+ +++L+ LD IP W Sbjct: 361 VAAGDLLAITGAGAYGAVMASTYNSRLLVPEILVQNTRYDVIRPRLDYEQLMGLDHIPDW 420 Query: 420 LQK 422 ++ Sbjct: 421 IEN 423 >gi|254472266|ref|ZP_05085666.1| diaminopimelate decarboxylase [Pseudovibrio sp. JE062] gi|211958549|gb|EEA93749.1| diaminopimelate decarboxylase [Pseudovibrio sp. JE062] Length = 423 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 211/423 (49%), Positives = 293/423 (69%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F++ +G LHAE+V+L ++A V TPFYCYS E+++ F AFDG+D + CYA+K Sbjct: 1 MHYFEFKDGVLHAEDVALTEIAAEVGTPFYCYSRATFERHFKVFDGAFDGIDHLTCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN A++ LA LG+G D+VSEGELRRAL A +PA +IVFSGVGKT E+ AL +GI Sbjct: 61 ANSNIAILTVLAKLGAGADVVSEGELRRALKAGIPANKIVFSGVGKTRQEMRFALNAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE ELK L++ A +GK API+ R+NPD++A TH KISTG +KFGI + + Sbjct: 121 CFNVESEPELKRLSEVASEMGKTAPISLRINPDVDAKTHAKISTGLAANKFGIAWDRARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LPG+K++G+DMHIGSQI ++ F A + L L L+ +G I+H+DVGGGL Sbjct: 181 VYNEAAQLPGLKVTGMDMHIGSQITELGPFDDALERLGVLIGMLKEDGIEIEHLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y P ++YA ++ ++ L +I EPGR + + GILVT+ I K+ K Sbjct: 241 GIPYGGGIEAPLPTEYAKIVRKHIERLGVTLITEPGRLIAGNAGILVTETIYRKEGEPKN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D AMND +RPTLY+A+H+I + + + AD+VGP+CETGD+IA +R++ Sbjct: 301 FVIVDAAMNDLIRPTLYEAHHDIGAVSEERQNGEQMLADVVGPVCETGDYIARDRELPKF 360 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 GDLL + GAYGA QSGTYN+RLL+PE++V+G +F IIR R ++ EL+ D +P W+ Sbjct: 361 EEGDLLAVYSCGAYGATQSGTYNTRLLVPEVLVDGDKFAIIRQRPSYDELLNQDVVPNWV 420 Query: 421 QKT 423 +K Sbjct: 421 EKA 423 >gi|170724853|ref|YP_001758879.1| diaminopimelate decarboxylase [Shewanella woodyi ATCC 51908] gi|169810200|gb|ACA84784.1| diaminopimelate decarboxylase [Shewanella woodyi ATCC 51908] Length = 414 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 265/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G L AE+ + +LA TP Y YS +E+++ F +A ++CYA+K Sbjct: 1 MDHFLYKNGELLAEDCQVAELARTYGTPLYIYSRATLERHWHAFDSAVANHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R + A +++VFSGVGKT++E+++AL GI+ Sbjct: 61 ANSNIAVLNVLARLGSGFDIVSGGELSRVIEAGGDPKKVVFSGVGKTVEEMEMALNLGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A+ LGK AP++ RVNPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESAAELEQLNLVALKLGKIAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDDAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A LPG+++ GVD HIGSQ+ +I+ F A + L +L I+H DVGGGL Sbjct: 181 IFARAHALPGLQVKGVDCHIGSQLTEIKPFLDAMDRILALIDRLAEQDIIIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP YAS + + G+ + K+I EPGR + A+ GI VT+V+ +K ++DK Sbjct: 241 GVTYDDE-TPPQPDVYASALVERLGDRKLKLIFEPGRAIAANAGIFVTQVLYLKGNSDKH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP+LY A+ +I +V G+ + DIVGP+CETGDF+ R++ Sbjct: 300 FALVDGAMNDLIRPSLYSAWQKIIPVVPREGESRN--YDIVGPVCETGDFLGKEREL-CL 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 P D L + +GAYG S YNSR E+MV+G Q H+IR R +L + + + Sbjct: 357 EPQDYLAVRSSGAYGFTMSSNYNSRPRAAEVMVDGEQAHLIRQREKLSQLWQGEQL 412 >gi|310815091|ref|YP_003963055.1| diaminopimelate decarboxylase [Ketogulonicigenium vulgare Y25] gi|308753826|gb|ADO41755.1| diaminopimelate decarboxylase [Ketogulonicigenium vulgare Y25] Length = 419 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 199/421 (47%), Positives = 288/421 (68%), Gaps = 3/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L AE+VS+ +A V TP Y YST +++++ F +A GM +VC+A+K Sbjct: 1 MDHFNYRDGVLFAEDVSVADIARAVGTPVYIYSTATLKRHFQLFDDALAGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+KTL LG+G+D+VS GE RA AA VP ERIVFSG+GKT +EI L GI Sbjct: 61 ANSNVAVLKTLGDLGAGMDVVSVGEYLRAKAAGVPGERIVFSGIGKTREEIRTTLLGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE EL+ ++ A LG AP+A RVNPD++A+TH KI+TGK E+KFGIPI + + Sbjct: 121 QFNVESEPELQAISDIASELGLIAPVAVRVNPDVDAHTHAKIATGKSENKFGIPISRAQA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A++LPG+++ G+D+HIGSQ+ + F A++ + +LT+ LR+ GH I +D+GGGL Sbjct: 181 VYAFAASLPGIQVVGIDVHIGSQLTDLAPFRAAYQKVAELTEVLRAEGHTISRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP S+Y +++ + G+L +I +EPGR + + G+LV++VI +K+ D+ Sbjct: 241 GIPYRRDNSAPPLPSEYGAMVRETLGHLDVEIEIEPGRLIAGNAGLLVSRVIYVKEGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RP +Y+A+H+I + D+VGP+CETGD A R +A Sbjct: 301 RFLIVDAAMNDLIRPAMYEAHHDIIPVDESL--APSTVYDVVGPVCETGDTFARGRAMAP 358 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 G+L+ GAYGAV + YNSR L+PE++VNG QF +IRPR +++E+I D+IPAW Sbjct: 359 LNAGELVAFRSAGAYGAVMASEYNSRPLVPEVLVNGDQFAVIRPRPSYEEMIARDTIPAW 418 Query: 420 L 420 L Sbjct: 419 L 419 >gi|108802931|ref|YP_642868.1| diaminopimelate decarboxylase [Rubrobacter xylanophilus DSM 9941] gi|108764174|gb|ABG03056.1| diaminopimelate decarboxylase [Rubrobacter xylanophilus DSM 9941] Length = 416 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 169/420 (40%), Positives = 248/420 (59%), Gaps = 4/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G LH E+V L ++A TP Y YS A+E+ Y AF G+D +VC+A+K Sbjct: 1 MDEFHYRGGVLHCEDVPLHEIARGAGTPAYVYSYAALERAYREVEEAFSGLDHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN N AV++ LA LG+G DIVS GEL RA+ A +++VF+GVGKT E+ L I Sbjct: 61 ANGNLAVLRALASLGAGADIVSGGELYRAMRAGFDPKKVVFAGVGKTEQELKAGLGERIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ L + A GK+A +A R+NP ++ TH+ ISTG E KFGIP + S Sbjct: 121 MFNVESAGELEHLERLAHLHGKRARVALRINPGVDPGTHEHISTGNVESKFGIPADEALS 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L A V + GV HIGSQI ++ + ++ + L +LRS G +I+++++GGGL Sbjct: 181 LAERAKGFRCVDLIGVHQHIGSQIVKVAPYVESVERSAALVDELRSRGFDIRYLNIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PS ++ I KI+ E GR++ G L+T V+ K+S +++ Sbjct: 241 GIRYRDE-ETPSPAELVEAIRPTLAASGAKILCEMGRYIAGPAGALLTGVLYRKRSGERS 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F++ D MND +RP+LY AYHE+ + AD+VGP+CE+GDF+A +R + Sbjct: 300 FIVADAGMNDLIRPSLYGAYHEVLPLDE---GADQTRADLVGPVCESGDFLARDRDLPDA 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 R GD+L + GAYG + YNSR E++V ++ ++R R + +LI + +PA+L Sbjct: 357 REGDVLAVMNAGAYGFSMASNYNSRPRPAEVLVREDRWAVVREREHYPDLIRGELVPAFL 416 >gi|2499347|sp|O05321|DCDA_PSEFL RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|1929094|emb|CAA72943.1| LysA protein [Pseudomonas fluorescens] Length = 416 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 189/417 (45%), Positives = 257/417 (61%), Gaps = 5/417 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y G L AE V+L +A TP Y YS IE Y TF++A +GM +VC+A+K Sbjct: 1 MDAFNYRGGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRTFADALEGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA A++IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGSADKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESEL-KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFN+ES EL L A LG +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNIESTDELGSRLQIVAAELGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAE 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A+ LP +++ GVD HIGSQ+ +E F A L L +L G ++HID+GGG Sbjct: 181 DVYVRAAQLPNLEVLGVDCHIGSQLTTLEPFIDALDRLLALVDRLGDCGIYLRHIDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 +G+ Y + PP +DY + + ++ EPGR++VA+ G+L+T+V +K + K Sbjct: 241 VGVRYRDE-EPPLVADYIKAVRERLDGRDLALMFEPGRYIVANAGVLLTQVEYLKHTEHK 299 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RP LY A+ ++ + D DIVGPICETGDF+A R++A Sbjct: 300 DFAIVDAAMNDLIRPALYQAWMDVTAVR--PRDTAARSYDIVGPICETGDFLAKGRELA- 356 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G Q +R R T EL +S+ Sbjct: 357 LEEGDLLAVHSAGAYGFVMSSNYNTRGRCAEVLVDGDQAFEVRRRETVAELFAGESL 413 >gi|167036274|ref|YP_001671505.1| diaminopimelate decarboxylase [Pseudomonas putida GB-1] gi|166862762|gb|ABZ01170.1| diaminopimelate decarboxylase [Pseudomonas putida GB-1] Length = 415 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 263/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+AF Y +G L AE V+L +A TP Y YS IE Y ++++A G + +VC+A+K Sbjct: 1 MNAFNYRDGELFAEGVALSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA A+R+VFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L A +GK AP++ RVNPD++A TH ISTG KE+KFGI I + Sbjct: 121 CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP +++ GVD HIGSQ+ +E F A L L +L G +++H+D+GGG+ Sbjct: 181 IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP +DY I + G ++ EPGR++VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-QPPLVADYIKAIRERVGERDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + AG+ D+VGPICETGDF+ +R + Sbjct: 300 FAIIDAAMNDLIRPALYQAWMGVSAVKPRAGEGR--AYDLVGPICETGDFLGKDRVLN-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R EI+V+G Q +R R T EL +S+ Sbjct: 357 AEGDLLAVASAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETIAELYAGESL 412 >gi|92118935|ref|YP_578664.1| diaminopimelate decarboxylase [Nitrobacter hamburgensis X14] gi|91801829|gb|ABE64204.1| diaminopimelate decarboxylase [Nitrobacter hamburgensis X14] Length = 421 Score = 317 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 218/421 (51%), Positives = 295/421 (70%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+V+L LA VV TPFYCYST +E++Y F++AF G+D +VCYA+K Sbjct: 1 MRHFDYRDGVLHAESVNLSALAEVVGTPFYCYSTATLERHYRVFADAFAGVDHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++TLA LG+G D+VS GEL+RALAA +PA +I+FSGVGKT E+ AL + Sbjct: 61 ANSNQSVLRTLAKLGAGADVVSGGELKRALAAGIPASKILFSGVGKTDAELRAALAVDVL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVESE EL L++ A G+ A I+ RVNPD+++ TH KISTG+ E+KFGIPI + + Sbjct: 121 CINVESEPELDLLSKLASEAGRTARISIRVNPDVDSGTHAKISTGRSENKFGIPIARARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+ LPG+ ++GVDMHIGSQI + AF+LL D LR++GH I H+D GGGL Sbjct: 181 VYAHAAKLPGIAVTGVDMHIGSQITDLGPMEAAFRLLADFVTTLRADGHTISHVDFGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 Y PP YA ++ + NL C ++ EPGR +V + GILVT+VI +K + Sbjct: 241 GIPYYEDRAAPPEPLAYAEMVRRVTHNLGCTLMFEPGRMIVGNAGILVTRVIYVKHGDAR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RPTLY+AYH+I + D + AD+VGP+CETGD++AL R + Sbjct: 301 NFIIIDAAMNDLIRPTLYEAYHQIIPVRAAPKDAPVMVADVVGPVCETGDYLALGRNLPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+ GDLL I GAYGAVQSGTYN+R LIPE++V Q+ ++RPR+ ++LI +D W Sbjct: 361 PQAGDLLAIMTAGAYGAVQSGTYNTRALIPEVLVKDDQYAVVRPRIEVEQLIAMDMSAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|288941801|ref|YP_003444041.1| diaminopimelate decarboxylase [Allochromatium vinosum DSM 180] gi|288897173|gb|ADC63009.1| diaminopimelate decarboxylase [Allochromatium vinosum DSM 180] Length = 423 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 258/416 (62%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F +G LHAE V L ++A TP Y YS +E+++ F AF ++C+++K Sbjct: 1 MDHFNDRDGLLHAEEVPLTEIAERFGTPCYVYSRATLERHWRAFERAFRDHPHLICFSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LGSG DIVS GEL R LAA R+VFSGVGK DEI AL+ GI Sbjct: 61 SNSNLAVLNVLARLGSGFDIVSVGELERVLAAGGDPARVVFSGVGKRADEIRRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESESEL +++ A LG +AP++ RVNPD++ TH ISTG KE+KFGI I + S Sbjct: 121 CFNVESESELTRIDRIAGELGVRAPVSLRVNPDVDPQTHHYISTGLKENKFGIDIQEAES 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ +P +K+ G+D HIGSQ+ + F A + L +L ++G I+H+D+GGGL Sbjct: 181 VYALAAAMPNLKVVGIDCHIGSQLTDLAPFIDALGRVLALADRLCASGIAIEHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y +H P ++ A++ H + ++ILEPGR +V + G+L+T+V +K K Sbjct: 241 GIRYREEHPPEPAAYAAAMSH-LLADRPYEVILEPGRAIVGNAGVLLTQVEYLKHGPHKH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ILD AMND +RP LY A HEI +V D D+VGP+CETGDF+ +R +A Sbjct: 300 FAILDAAMNDLLRPALYQAGHEIVRVVQ-ETDADPSRYDLVGPVCETGDFLGKDRTLA-L 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + GAYG S YNSR E+MV+G + +++R R +L + + Sbjct: 358 EEGDLVAVRGAGAYGFTMSSNYNSRPRAAEVMVDGDRAYLVRAREQVADLYAGEQL 413 >gi|77461719|ref|YP_351226.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf0-1] gi|77385722|gb|ABA77235.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf0-1] Length = 415 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 188/416 (45%), Positives = 258/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y G L AE V+L +A TP Y YS IE YL +++A GM +VC+A+K Sbjct: 1 MDAFNYRGGELFAEGVALSAIADRFGTPTYVYSRAHIEAQYLAYADALAGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA +G+G DIVS GEL R LAA ++IVFSGVGKT D++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARIGAGFDIVSRGELERVLAAGGSPDKIVFSGVGKTRDDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L A LG +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQVVAAELGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP +++ GVD HIGSQ+ + F A L DL +L G +++HID+GGGL Sbjct: 181 VYVRAAHLPNLEVVGVDCHIGSQLTTLPPFLDALDRLLDLVDRLGDCGIHLRHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP ++DY + + ++ EPGRF+VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLAADYIKAVRERLVGRDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + + D+VGPICETGDF+A R++A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVTPVK--PRETAARTYDVVGPICETGDFLAKERELA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G Q +R R T EL +S+ Sbjct: 357 EEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQAFEVRRRETVAELFAGESL 412 >gi|15600470|ref|NP_253964.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PAO1] gi|12230897|sp|P19572|DCDA_PSEAE RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|9951590|gb|AAG08662.1|AE004940_6 diaminopimelate decarboxylase [Pseudomonas aeruginosa PAO1] Length = 415 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 189/416 (45%), Positives = 259/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + L AE V+L ++A TP Y YS IE Y +++A GM +VC+A+K Sbjct: 1 MDTFSYRDAELFAEGVALSRIAERFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA ++VFSGVGKT D++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A LG KAP++ RVNPD++A TH ISTG KE+KFGI I + + Sbjct: 121 CFNVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ L +++ GVD HIGSQ+ Q+E F A + L L +L G I+H+D+GGGL Sbjct: 181 VYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP + DY I + ++ EPGR +VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-QPPLAGDYIRAIRERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ + D D+VGPICETGDF+A +R +A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMD--VQAVRPRDAAPRRYDLVGPICETGDFLAKDRDLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G Q H +R R T QEL +S+ Sbjct: 357 AEGDLLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQTHEVRRRETVQELYAGESL 412 >gi|254360888|ref|ZP_04977034.1| diaminopimelate decarboxylase [Mannheimia haemolytica PHL213] gi|261493013|ref|ZP_05989555.1| diaminopimelate decarboxylase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|153092367|gb|EDN73430.1| diaminopimelate decarboxylase [Mannheimia haemolytica PHL213] gi|261311357|gb|EEY12518.1| diaminopimelate decarboxylase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 416 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 193/416 (46%), Positives = 269/416 (64%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L AE V++ + TP Y YS + +E+++ F+NAF +VC+A+K Sbjct: 1 MNHFEYKNNQLFAEEVAIADIIEQYGTPAYVYSRSTLERHWHAFNNAFGSHPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGEASKVVFSGVAKSHSEIKRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES SEL +NQ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNIESVSELHRINQVAGELGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A TLP VKI+G+D HIGSQ+ +++ F A L L +QLR +G + H+D+GGGL Sbjct: 181 VYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLIILMEQLREDGIELHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P + +L+ + G +II+EPGR + A+ GILVTKV +K++ D+ Sbjct: 241 GVPYNGEEPPHPTEYAKALLEKLKGYENLEIIIEPGRAITANAGILVTKVEYLKQNEDRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY +I + R D+VGPICET DF+ R++A Sbjct: 301 FAIVDTGMNDMIRPALYEAYMQITEVDKTLN-RDKAVYDVVGPICETSDFLGKQRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ I GAYGA S TYNSR EIMV+G+Q H+I+ R TF +L L+ + Sbjct: 359 SEGDLIAIRSAGAYGAAMSSTYNSRPQAAEIMVDGNQAHLIKARATFADLWRLEKL 414 >gi|317153254|ref|YP_004121302.1| diaminopimelate decarboxylase [Desulfovibrio aespoeensis Aspo-2] gi|316943505|gb|ADU62556.1| diaminopimelate decarboxylase [Desulfovibrio aespoeensis Aspo-2] Length = 412 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 175/414 (42%), Positives = 257/414 (62%), Gaps = 3/414 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y +G+L AE V + LA TP Y YS + +++ F +AFDG+D + CY++K Sbjct: 1 MHHFEYRDGALFAEEVPVTALAGQYGTPLYVYSAATLTRHFQAFDSAFDGLDHLTCYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN +V+K LA LG+G+DIVS GEL RAL A V ++IV+SGVGK EI AL +GI Sbjct: 61 ANSNLSVLKLLAGLGAGMDIVSGGELYRALKAGVSPDKIVYSGVGKRPSEIREALDAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN+ES +EL +N+ A GK A ++FR+NPD++ TH ISTG K++KFG+ I Sbjct: 121 MFNIESVAELLKINEVAGEAGKVAKVSFRINPDVDPQTHPYISTGMKKNKFGLDIENSLE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y + L ++ G+D HIGSQ+ I F +A L D +L+ G I+++D+GGGL Sbjct: 181 AYRMCADLANIEPIGMDCHIGSQLTSIAPFMEALDKLLDFYGRLKDMGIGIKYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP +++ + + + K+ILEPGR + + GILVT+V+ K + + Sbjct: 241 GITYDEE-EPPHPTEFGQALKEKLTGVPLKVILEPGRVIAGNAGILVTEVVYTKSNPSRN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I+D AMND +RP+LY +YH I + +R + D+VGPICE+GDF+A R + Sbjct: 300 FLIVDAAMNDLVRPSLYGSYHRIAEVT--PKERDSLTYDVVGPICESGDFLARERALPAV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 G+LL + GAYG S YNSR E++V+G + R R T+++LI+ + Sbjct: 358 NQGELLAVFSAGAYGFTMSSNYNSRPRACELLVDGDTVTVARKRETYEDLIDKE 411 >gi|49088246|gb|AAT51548.1| PA5277 [synthetic construct] Length = 416 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 188/416 (45%), Positives = 259/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + L AE V+L ++A TP Y YS IE Y +++A GM +VC+A+K Sbjct: 1 MDTFSYRDAELFAEGVALSRIAERFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA ++VFSGVGKT D++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CF+VES EL+ L + A LG KAP++ RVNPD++A TH ISTG KE+KFGI I + + Sbjct: 121 CFDVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ L +++ GVD HIGSQ+ Q+E F A + L L +L G I+H+D+GGGL Sbjct: 181 VYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP + DY I + ++ EPGR +VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-QPPLAGDYIRAIRERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ + D D+VGPICETGDF+A +R +A Sbjct: 300 FAIVDAAMNDLIRPALYQAWMD--VQAVRPRDAAPRRYDLVGPICETGDFLAKDRDLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E++V+G Q H +R R T QEL +S+ Sbjct: 357 AEGDLLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQTHEVRRRETVQELYAGESL 412 >gi|148550336|ref|YP_001270438.1| diaminopimelate decarboxylase [Pseudomonas putida F1] gi|148514394|gb|ABQ81254.1| diaminopimelate decarboxylase [Pseudomonas putida F1] Length = 415 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 187/416 (44%), Positives = 264/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+AF Y +G L AE V+L +A TP Y YS IE Y ++++A G + +VC+A+K Sbjct: 1 MNAFNYRDGELFAEGVALSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA A+R+VFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L A +GK AP++ RVNPD++A TH ISTG KE+KFGI I + Sbjct: 121 CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP +++ GVD HIGSQ+ +E F A L L +L G +++H+D+GGG+ Sbjct: 181 IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP +DY I + G ++ EPGR++VA+ G+L+T+V +K + K Sbjct: 241 GVRYRDE-QPPRVADYIKAIRERVGERDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + AG+ D+VGPICETGDF+ +R + Sbjct: 300 FAIIDAAMNDLIRPALYQAWMGVSAVKPRAGEGR--AYDLVGPICETGDFLGKDRVLN-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL +E GAYG V S YN+R EI+V+G Q +R R T EL +S+ Sbjct: 357 TEGDLLAVESAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETVAELYAGESL 412 >gi|308271344|emb|CBX27952.1| Diaminopimelate decarboxylase [uncultured Desulfobacterium sp.] Length = 427 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 194/420 (46%), Positives = 273/420 (65%), Gaps = 3/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y + L+ ENV + + + TP Y YS +++++ F++AF G++ +VC++ K Sbjct: 11 MNHFIYRDKELYCENVPVRNIVQKIGTPLYIYSHATLKRHFKAFNDAFKGVNKLVCFSAK 70 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N A++ + LG GLDIVS GEL R L A + +IV+SGVGK IDEID AL+ GI Sbjct: 71 ANTNLAILSLFSKLGGGLDIVSGGELYRGLKAGYASNKIVYSGVGKRIDEIDYALKMGIL 130 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ ++QRA L KKAP+A RVNPD++ TH ISTG K++KFGI I Sbjct: 131 MFNVESMEELEIVDQRAGLLKKKAPVAIRVNPDVDPKTHPYISTGMKKNKFGINIEAAME 190 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A+ L +K+ G+D HIGSQI Q F A +L+ + + L + NI+++D+GGGL Sbjct: 191 AYKVAAKLKNIKVIGLDCHIGSQITQTGPFKDALYILKTMIKDLAACKINIKYLDLGGGL 250 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ + PP +YA+ I + G+ + K+I EPGR +V + GILVTKV+ K + K Sbjct: 251 GITYNDE-EPPDPVEYANAIKEVIGDTKVKLIFEPGRVIVGNAGILVTKVLYRKSTGVKE 309 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I+D MND +RPTLY+A+H I +V D I ADIVGPICE+GDF+AL+R I Sbjct: 310 FIIVDAGMNDLVRPTLYEAFHAIKPVV--DSDNEEIKADIVGPICESGDFLALDRNIQKV 367 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 GDLL + +GAYG V S Y SRL + E+MVNG +F + R R +++L + IP +L Sbjct: 368 EQGDLLAVMSSGAYGFVMSSNYCSRLKLAEVMVNGDKFQVARKRQKYEDLTRGEIIPDFL 427 >gi|115526828|ref|YP_783739.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisA53] gi|115520775|gb|ABJ08759.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisA53] Length = 421 Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats. Identities = 221/421 (52%), Positives = 296/421 (70%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G LHAE V+L LA V TPFYCYST +E++Y F+ AF D +VCYA+K Sbjct: 1 MHHFDYNAGVLHAEAVNLAVLAEAVGTPFYCYSTATLERHYRVFTEAFADTDALVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++TLA LG+G D+VS GE+ RALAA +P +IVFSGVGKT+DE+ AL I Sbjct: 61 ANSNQSVLRTLAKLGAGADVVSGGEMARALAAGIPPSKIVFSGVGKTVDELRAALDHDIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVESE EL+ L+ A+S+GK A I+ RVNPD+++ TH KISTGK E+KFGIP+ + Sbjct: 121 CINVESEPELEMLSALAMSMGKTATISIRVNPDVDSGTHAKISTGKSENKFGIPLVKARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG++++GVD+HIGSQI + AF+LL D LR +GH I H+D GGGL Sbjct: 181 VYARAAALPGLRVTGVDVHIGSQITDLGPMEAAFRLLADFVTVLRGDGHTISHVDFGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 Y PP YA+++ + NL C+++ EPGR +V + GILV +VI +K K Sbjct: 241 GIPYYEDPTTPPEPLAYAAMVKRITHNLGCRLMFEPGRMIVGNAGILVARVIHVKHGDGK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYH+I I PA I AD+VGP+CETGD++AL+R++ Sbjct: 301 TFVIIDAAMNDLIRPTLYEAYHDILPIKAPAPGAGEITADVVGPVCETGDYLALSRRLPA 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ I GAYGAVQ+ TYN+R L+PE++V G Q+ +IRPR++ ++LI LD+ W Sbjct: 361 LKSGDLIAIMTAGAYGAVQACTYNTRPLVPEVLVKGDQYAVIRPRLSVEQLIALDTPAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|312884202|ref|ZP_07743913.1| diaminopimelate decarboxylase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368130|gb|EFP95671.1| diaminopimelate decarboxylase [Vibrio caribbenthicus ATCC BAA-2122] Length = 417 Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats. Identities = 193/420 (45%), Positives = 268/420 (63%), Gaps = 5/420 (1%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L AE+V+L LA TP Y YS +E+++ F +A +VCYA+ Sbjct: 1 MDYFNYQSDGQLWAEDVALTTLAEQYGTPLYVYSRATLERHWNAFDSAVGDHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R +AA +++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSGGELERVIAAGGDPKKVVFSGVGKTRAEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LNQ A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNQVAGELGVVAPISLRINPDVDAKTHPYISTGLRDNKFGIAFERAS 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y +A +LP + I G+D HIGSQ+ +IE F A L L L++ G NI+H+DVGGG Sbjct: 181 TVYDFAQSLPHLSIKGIDCHIGSQLTEIEPFIDATDRLLKLIDDLKTQGINIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + G+ + ++I EPGR + A+ GIL+T+V +K + K Sbjct: 241 LGVVYRDELPPQPSDYAKALLARLDGHKELELIFEPGRAIAANAGILLTRVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ EI +V G+ D+VGPICETGDF+ +R++ + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQEIVPVVPRKGE--TQTYDLVGPICETGDFLGKDREL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 R GDLL + +GAYG V + YN+R+ E+MV+G + H++R R + L L+ IP Sbjct: 358 LREGDLLAVRSSGAYGFVMASNYNTRVRSAEVMVDGHKTHLVRQREELESLWALEHIIPE 417 >gi|313202258|ref|YP_004040916.1| diaminopimelate decarboxylase [Methylovorus sp. MP688] gi|312441574|gb|ADQ85680.1| diaminopimelate decarboxylase [Methylovorus sp. MP688] Length = 415 Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats. Identities = 191/416 (45%), Positives = 265/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+AF+ G LHAE V L +LA TP Y YS A+E Y F F G+D +VC+A+K Sbjct: 1 MNAFQLKNGQLHAEQVPLNQLAEEFSTPCYVYSRQALETAYRDFQQGFAGVDHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN + V+ A LG+G DIVS GEL R LAA A ++VFSGVGKT DE+ AL +GI+ Sbjct: 61 ANPSLGVLSVFAKLGAGFDIVSGGELARVLAAGGDASKVVFSGVGKTADEMRAALTAGIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN+ A S+GK AP++ RVNP+++A TH ISTG K +KFG+ Q + Sbjct: 121 CFNVESAAELERLNEVAGSMGKIAPVSLRVNPNVDAKTHPYISTGLKNNKFGVAYEQSLA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY A+ +P + + GVD HIGSQ+ ++ F AF + L QL + G I+HID GGG+ Sbjct: 181 LYQQAAAMPNIDVHGVDCHIGSQLTELSPFLDAFDRVLALVDQLEAAGIAIRHIDAGGGI 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ + PP + YA+ + + G+ + K++ EPGR LV + G L+T+V +K + K Sbjct: 241 GICYNEE-TPPDFAAYAAAMLKKLGDRKVKLVFEPGRALVGNAGALLTRVEYLKHTEAKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND MRP LYDAYH+I + +IVGP+CE+GDF+ +R++ Sbjct: 300 FAIVDAAMNDLMRPALYDAYHQIAEVS--PDATPKEIYEIVGPVCESGDFLGHDRELG-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL I GAYG S YN+R E+MV+G+ + +IR R T EL L+++ Sbjct: 357 KQGDLLAILSAGAYGMSMSSNYNTRPRAAEVMVDGASYQLIRKRETIAELFALENV 412 >gi|163748703|ref|ZP_02155956.1| diaminopimelate decarboxylase [Shewanella benthica KT99] gi|161331813|gb|EDQ02617.1| diaminopimelate decarboxylase [Shewanella benthica KT99] Length = 414 Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats. Identities = 182/416 (43%), Positives = 258/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE+ S+ +LA TP Y YS +E+++ F A ++CYA+K Sbjct: 1 MDHFLYKNNELLAEDCSVAELARTHGTPLYIYSRATLERHWHAFDRAVADHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT E+++AL I Sbjct: 61 ANSNIAVLNVLARLGSGFDIVSGGELLRVIEAGGEPAKVVFSGVGKTAAEMEMALNLDIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A +GK AP++ R+NPD++A TH ISTG K++KFGI + Q + Sbjct: 121 CFNVESAAELEQLNIVAGRIGKIAPVSLRINPDVDAGTHPYISTGLKDNKFGIAMEQAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A+ LP ++I GVD HIGSQ+ +I+ F A + L +L G +I+H DVGGGL Sbjct: 181 IFARAAALPNLEIKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLAEQGIHIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G++Y + PP YA+ + + G+ + K+I EPGR + A+ GI VT+V+ +K + DK Sbjct: 241 GVSYGDE-TPPQPDVYAAALLERLGSRKLKLIFEPGRAIAANAGIFVTQVLYLKSNDDKH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP LY A+ I + D ++ DIVGPICETGDF+ +R++ Sbjct: 300 FALVDGAMNDLIRPALYSAWQNIIPVK--PRDGKTLNYDIVGPICETGDFLGKDRELN-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L + +GAYG S YNSR E+MV+G Q +IR R +L + + + Sbjct: 357 AAGDYLAVCSSGAYGFTMSSNYNSRPRSAEVMVDGEQAFVIREREKLTQLWQGEQL 412 >gi|157960206|ref|YP_001500240.1| diaminopimelate decarboxylase [Shewanella pealeana ATCC 700345] gi|157845206|gb|ABV85705.1| diaminopimelate decarboxylase [Shewanella pealeana ATCC 700345] Length = 414 Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats. Identities = 183/416 (43%), Positives = 267/416 (64%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L+AE + +LA TP Y YS +E+++ F NA ++CYA+K Sbjct: 1 MDHFLYQADELYAEQCQVAELAKQHGTPLYIYSRATLERHWRAFDNAVSEHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT+ E+++AL GIY Sbjct: 61 ANSNIAVLNVLARLGSGFDIVSGGELSRVIEAGGDPTKVVFSGVGKTVSEMEMALNLGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A+ LGK AP++ R+NPD++A TH ISTG KE+KFGI + + + Sbjct: 121 CFNVESAAELEQLNLVALRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A+ LPG+ + GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 IFARANELPGLAVKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLAEQGIEIKHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP YA+ + + G+ K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTYDDE-QPPQPDVYAAALLERLGDRDLKLIFEPGRAIAANAGIFVTQVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP+LY A+ +I ++ AG+ D+VGP+CETGDF+ +R++ Sbjct: 300 FALVDGAMNDLIRPSLYSAWQKIVPVIERAGES--HSYDVVGPVCETGDFLGKDRQLN-V 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L + +GAYG + YNSR E+MV+G + ++IR R +L + + I Sbjct: 357 QEGDYLAVRSSGAYGFTMASNYNSRPRAAELMVDGDKAYVIREREKVAQLWQGEQI 412 >gi|332289594|ref|YP_004420446.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Gallibacterium anatis UMN179] gi|330432490|gb|AEC17549.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Gallibacterium anatis UMN179] Length = 417 Score = 316 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 260/416 (62%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE +S+++LA TP Y YS +E+++ F +A G ++C+A+K Sbjct: 1 MDYFNYKNDQLMAEEISVKQLAQQFGTPLYVYSRATLERHWHAFDSALQGHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N N A++ LA LGSG DIVS+GEL R LAA A ++VFSGV K+ EI+ AL+ GI Sbjct: 61 SNPNIALLNLLAKLGSGFDIVSQGELERVLAAGGEANKVVFSGVAKSHTEIERALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL +NQ A LGKKAPI+ RVNPD++A TH ISTG K++KFG+ + + Sbjct: 121 CFNVESEAELLRINQVAEKLGKKAPISLRVNPDVDAKTHPYISTGLKKNKFGVSVERARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A TLP ++I G+D HIGSQ+ +++ F + L L +QLR +G +QH+D+GGGL Sbjct: 181 VYRLAKTLPHIQIVGMDCHIGSQLTELQPFLDSADRLLVLLEQLRQDGIELQHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P + ++L+ ++ + +IILEPGR + A+ GILVTKV +K + D Sbjct: 241 GVRYSDETPPHPTEYASALLAKFKQYPELEIILEPGRAISANAGILVTKVEYLKSNEDFN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY AY EI DR D+VGPICET DF+ R +A Sbjct: 301 FAIVDAGMNDMIRPALYQAYMEIIEADRTL-DRERKVYDVVGPICETSDFLGKGRSLA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD + GAYGA + YNS E++V+G + H+I+ R F+EL + + Sbjct: 359 AAGDFIVQRSAGAYGASMASNYNSHPRAAEVLVDGDKAHLIKRRERFEELWACEQL 414 >gi|260913224|ref|ZP_05919706.1| diaminopimelate decarboxylase [Pasteurella dagmatis ATCC 43325] gi|260632811|gb|EEX50980.1| diaminopimelate decarboxylase [Pasteurella dagmatis ATCC 43325] Length = 416 Score = 316 bits (809), Expect = 5e-84, Method: Composition-based stats. Identities = 183/416 (43%), Positives = 253/416 (60%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L AE V + +A TP Y YS +E+++ F A ++C+A+K Sbjct: 1 MDYFQYQNQQLMAEQVPVIHIAQQFGTPLYIYSRATLERHWHAFDKALGKHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N N A++ +A LGSG DIVS+GEL R L A A +IVFSGV KT EI AL+ GI Sbjct: 61 SNPNIAILNVMAKLGSGFDIVSQGELERVLVAGGDANKIVFSGVAKTETEIARALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL +NQ A LGK API+ RVNPD++A+TH ISTG KE+KFGI + + Sbjct: 121 CFNVESVAELHRINQVAGELGKVAPISLRVNPDVDAHTHPYISTGLKENKFGISVDEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +KI+G+D HIGSQ+ +++ F A L L +QL+ + ++H+D+GGGL Sbjct: 181 VYRLASQLPHIKITGMDCHIGSQLTELQPFLDATDRLIVLMKQLKEDSIQLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P + ++L+ + +IILEPGR + A+ GILVTKV +K + ++ Sbjct: 241 GVTYTDETPPHPTEYASALLEKLSDYPDLEIILEPGRAITANAGILVTKVEYLKHNENRH 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY AY I I + + D+VGPICET DF+ R +A Sbjct: 301 FAIVDAGMNDMIRPALYQAYMNIIEIDRTLARKPQV-YDVVGPICETSDFLGKQRTLA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD + GAYGA S YNSR E+MV+G Q H+IR R +EL L+ + Sbjct: 359 AEGDYIAQRSAGAYGASMSSNYNSRSRTAEVMVDGEQVHLIRRREKLEELWALEQL 414 >gi|86160486|ref|YP_467271.1| diaminopimelate decarboxylase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776997|gb|ABC83834.1| diaminopimelate decarboxylase [Anaeromyxobacter dehalogenans 2CP-C] Length = 427 Score = 316 bits (809), Expect = 5e-84, Method: Composition-based stats. Identities = 185/431 (42%), Positives = 254/431 (58%), Gaps = 9/431 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F G LHAE V +E+LA TP Y YST + +++ + G+D +VCYA+K Sbjct: 1 MNHFLRKRGVLHAEAVPVEQLAEAYGTPLYVYSTATLTRHWKVLHRSLAGLDHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ A LGSG DIVS GEL R L A ++VFSGVGK DEI AL+SG+ Sbjct: 61 ANSNLAVLSLFARLGSGFDIVSGGELYRVLKAGGHPGKVVFSGVGKRDDEIAFALESGVK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 NVES EL ++ A +G +APIA RVNPD++ TH ISTG E+KFG+ + + Sbjct: 121 VLNVESAPELARVSIVARRMGVRAPIALRVNPDVDPKTHPYISTGLSENKFGVSVDEARR 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA A+ P +++ GV HIGSQI + F A + L + L G + H+DVGGGL Sbjct: 181 LYALAAQDPALELRGVACHIGSQITTVRPFLDAIARVLALVKDLGKQGIRLGHVDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + P +Y I + +++LEPGR LV + G+LVT+V+ +K+S K Sbjct: 241 GITYADEEP-PHPDEYGRAIKKALSRFDGEVMLEPGRVLVGNAGVLVTRVLHVKESGRKV 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV++D AMND +RP+ YDA+HEI P D I D+VGPICE+ DF+A R++ P Sbjct: 300 FVVVDAAMNDLVRPSYYDAHHEIEPAGAPRKDAEEIVCDVVGPICESSDFLARKRRMPRP 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 GDLL + GAYG S YNSR E++V+G + R R T+ +L+ + Sbjct: 360 VRGDLLVVRSAGAYGFAMSSNYNSRPRAAEVLVDGDGARLARRRETYADLVRGE------ 413 Query: 421 QKTPKQSSENY 431 TP+ +E + Sbjct: 414 --TPEPEAERF 422 >gi|77920014|ref|YP_357829.1| diaminopimelate decarboxylase [Pelobacter carbinolicus DSM 2380] gi|77546097|gb|ABA89659.1| diaminopimelate decarboxylase [Pelobacter carbinolicus DSM 2380] Length = 417 Score = 316 bits (809), Expect = 5e-84, Method: Composition-based stats. Identities = 198/420 (47%), Positives = 267/420 (63%), Gaps = 3/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y + L E+V+L+ +A V TPFY YS + ++ FS+AF + ++CY++K Sbjct: 1 MNYFQYRDNDLFCEDVALKDIAAQVGTPFYVYSHATLSRHLEAFSSAFADVPHLICYSIK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+KT +G DIVS GEL RA +IV+SGVGKT EI ALQ+GI Sbjct: 61 ANSNLAVLKTFVSHNAGFDIVSGGELFRAQQVGCDPAKIVYSGVGKTEAEIADALQAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL T+N A LGKKA IA RVNPD++ TH ISTG K+ KFGI I Q Sbjct: 121 MFNVESRQELDTINAVAGRLGKKAGIAIRVNPDVDPQTHPYISTGMKKAKFGINISQALD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A++LP +++ GVD HIGSQ+ ++ F A +R+L Q L++ G I+++D+GGGL Sbjct: 181 DYRLAASLPNLEVIGVDCHIGSQLTKLSPFVDAIAKIRELVQTLQNEGFGIKYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PPS +DYA +I + L ++ EPGR +V + G+LV+KV+ +K+ K Sbjct: 241 GITY-EEEEPPSPADYAEVIIEGTKGLGVTLVFEPGRVMVGNAGMLVSKVLYVKEGEAKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D AMND RP LY +Y I + D I AD+VGPICE+GDF+A +R+I Sbjct: 300 FVIVDAAMNDLTRPALYGSYQGIQAVDRSTSD--TIVADVVGPICESGDFLAQDREITAF 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 GDLL + GAYG S YNSR +PEIMV G Q +IR R T+ +LI+ +SIP L Sbjct: 358 SQGDLLAVASAGAYGFTMSSNYNSRRRVPEIMVKGDQVMVIRKRETYDDLIKGESIPEGL 417 >gi|197124574|ref|YP_002136525.1| diaminopimelate decarboxylase [Anaeromyxobacter sp. K] gi|196174423|gb|ACG75396.1| diaminopimelate decarboxylase [Anaeromyxobacter sp. K] Length = 427 Score = 316 bits (809), Expect = 5e-84, Method: Composition-based stats. Identities = 183/431 (42%), Positives = 255/431 (59%), Gaps = 9/431 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+ G LHAE V +E+LA TP Y YST + +++ + G+D +VCYA+K Sbjct: 1 MNHFQRKRGVLHAEAVPVEELARAYGTPLYVYSTATLTRHWKVLHRSLAGLDHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ A LGSG DIVS GEL R L A ++VFSGVGK DEI AL+SG+ Sbjct: 61 ANSNLAVLSLFARLGSGFDIVSGGELYRVLKAGGHPGKVVFSGVGKRDDEIAFALESGVK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 NVES EL ++ A +G +AP+A RVNPD++ TH ISTG E+KFG+ + + Sbjct: 121 VLNVESAPELARVSIVARRMGLRAPVALRVNPDVDPKTHPYISTGLSENKFGVSVDEARR 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA A+ P +++ GV HIGSQI + F A + L + L G + H+DVGGGL Sbjct: 181 LYALAAQDPALEVRGVACHIGSQITTVRPFLDAIARVLSLVKDLGKQGIRLGHVDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + P +Y I + +++LEPGR LV + G+LVT+V+ +K+S K Sbjct: 241 GITYADEEP-PHPDEYGRAIKKALSRFDGEVMLEPGRVLVGNAGVLVTRVLHVKESGRKV 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV++D AMND +RP+ YDA+HEI P D I D+VGP+CE+ DF+A R++ P Sbjct: 300 FVVVDAAMNDLVRPSYYDAHHEIEAAGAPRKDADEIVCDVVGPVCESSDFLARKRRMPRP 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 GDLL + GAYG S YNSR E++V+G + R R T+ +L+ + Sbjct: 360 VRGDLLVVRSAGAYGFAMSSNYNSRPRAAEVLVDGDGARLARRRETYADLVRGE------ 413 Query: 421 QKTPKQSSENY 431 TP+ +E + Sbjct: 414 --TPEPEAERF 422 >gi|220921674|ref|YP_002496975.1| diaminopimelate decarboxylase [Methylobacterium nodulans ORS 2060] gi|219946280|gb|ACL56672.1| diaminopimelate decarboxylase [Methylobacterium nodulans ORS 2060] Length = 430 Score = 316 bits (809), Expect = 5e-84, Method: Composition-based stats. Identities = 227/422 (53%), Positives = 305/422 (72%), Gaps = 1/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G+LHAE V L +LA + TPFYCY++ +E++Y F+ AF G D +VCYA+K Sbjct: 1 MHHFTYRNGTLHAEEVDLAQLAGEIGTPFYCYASATLERHYRVFAEAFAGDDPLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ TLA LG+G+DIVSEGELRRALAA VPAERIVFSGV KT E++ ALQ+GI Sbjct: 61 ANSNQAVLATLARLGAGMDIVSEGELRRALAAGVPAERIVFSGVAKTKAEMEAALQAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL L++ A LG+ AP++ RVNPD++A TH KISTGK E+KFGIPI + Sbjct: 121 CFNVESEPELAALSEVAQGLGRDAPVSIRVNPDVDARTHAKISTGKSENKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+TLPG++++GVDMHIGSQI + F A LL +L + L + GH + HID GGGL Sbjct: 181 VYARAATLPGLRLAGVDMHIGSQITDLAPFDNAAALLAELARDLMAAGHRLHHIDFGGGL 240 Query: 241 GIAYHSDHRPPSSSD-YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP +A+++ +F L + + E GR + + GILVT+V+ +K+ + Sbjct: 241 GIPYRDDNAPPPDPSAFAAVLRPHFRPLGLRPVFEIGRMIAGNAGILVTRVVYVKQGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYH I + P + AD+VGP+CE+GD++AL R++ Sbjct: 301 TFVIVDAAMNDLIRPTLYEAYHAIRPVAQPDPHAPRLTADVVGPVCESGDYLALGREMPA 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDL+ + GAYGAVQ+GTYN+R L+PE++V G+ ++RPR T++ELI LD +P W Sbjct: 361 VAPGDLIAVMTAGAYGAVQAGTYNTRRLVPEVLVRGADHAVVRPRQTYEELIGLDRVPDW 420 Query: 420 LQ 421 L+ Sbjct: 421 LE 422 >gi|94499872|ref|ZP_01306408.1| putative diaminopimelate decarboxylase [Oceanobacter sp. RED65] gi|94428073|gb|EAT13047.1| putative diaminopimelate decarboxylase [Oceanobacter sp. RED65] Length = 417 Score = 316 bits (809), Expect = 5e-84, Method: Composition-based stats. Identities = 188/415 (45%), Positives = 261/415 (62%), Gaps = 3/415 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 F Y G L AE ++ LA +P Y YS A ++YL ++NAF D ++CYA+KA Sbjct: 3 DVFDYQNGELFAEQCAVSDLADRYGSPLYIYSRKAFSEHYLEYANAFKNEDALICYAVKA 62 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN AV+ LA LG+G DIVS GEL R L A +IVFSGV KT DE+ AL G++C Sbjct: 63 NSNIAVLNVLAKLGAGFDIVSVGELERVLKAGGDPSKIVFSGVAKTADEMRRALAVGVHC 122 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVESESEL+ LN A +G KAP++ RVNPD++A TH ISTG KE+KFG+ I + Sbjct: 123 FNVESESELERLNAVAEEMGVKAPLSLRVNPDVDAQTHPYISTGLKENKFGVDIDTAKQV 182 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 YA A + G++I GVD HIGSQ+ Q+E F A + L +L+ ++HID+GGGLG Sbjct: 183 YAKAKGMQGIEIKGVDCHIGSQLTQLEPFMDALDRVLVLVDELKEQAIELEHIDLGGGLG 242 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + Y + PP+ ++A + K++LEPGR + A+ GI VT+V +K + DK F Sbjct: 243 VTYDDE-VPPTPQEFADAVLPKLAGRNLKLVLEPGRSIAANAGIFVTQVEFLKSNGDKHF 301 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 I+D MND +RP+LY A+ I V P + D+VGP+CETGDF+ +R++A+ Sbjct: 302 AIIDGGMNDLIRPSLYSAWQRIV-EVQPREKTPKQNYDVVGPVCETGDFLGKDRELAIL- 359 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL ++ GAYG V + YN+R E+MV+G Q H+IR R T + + L+++ Sbjct: 360 PGDLLAVKSAGAYGFVMASNYNTRNKPAEVMVDGDQSHLIRRRETISDQLMLEAL 414 >gi|269961537|ref|ZP_06175900.1| diaminopimelate decarboxylase [Vibrio harveyi 1DA3] gi|269833766|gb|EEZ87862.1| diaminopimelate decarboxylase [Vibrio harveyi 1DA3] Length = 417 Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats. Identities = 189/420 (45%), Positives = 264/420 (62%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE+VSL+ LA TP Y YS +E+++ F +A +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAEDVSLQALAEQHGTPLYVYSRATLERHWNAFDSAVGEHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS GEL R +AA A+++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGDAKKVVFSGVGKTPAEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGELGVVAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y +A +LP + + G+D HIGSQ+ +IE F A L L L++ G NI+H+DVGGG Sbjct: 181 AVYKFAQSLPNLNVQGIDCHIGSQLTEIEPFIDATDRLLALIDDLKAQGINIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ GIL+T+V +K + K Sbjct: 241 LGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGILLTRVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + G+ D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVAPREGEA--QTYDLVGPICETGDFLGKDRAL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + GAYG V S YN+R E+MV+G+Q H++R R L +L+ +P Sbjct: 358 LQEGDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGNQSHLVRQREELTSLWQLEQILPE 417 >gi|288962188|ref|YP_003452483.1| diaminopimelate decarboxylase [Azospirillum sp. B510] gi|288914454|dbj|BAI75939.1| diaminopimelate decarboxylase [Azospirillum sp. B510] Length = 419 Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats. Identities = 213/420 (50%), Positives = 290/420 (69%), Gaps = 1/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F Y G LHAE+VSLE +A V TPFY YST A+E +Y ++ AF G D VCYALK Sbjct: 1 MSVFAYRNGVLHAESVSLEDVAREVGTPFYLYSTAALETHYNAYAGAFAGQDAGVCYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AVI+TLA+LG+G D+VS GE++RALA +PA RIVFSGVGKT +++ +AL++GI+ Sbjct: 61 ANSNLAVIRTLANLGAGGDVVSVGEMKRALAGGIPAGRIVFSGVGKTREDLRIALEAGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 NVES EL+ L++ A S+ +APIA RVNPD++A TH KI+TGKKE+KFGI Sbjct: 121 QINVESVPELEALSEVASSMRVEAPIALRVNPDVDAKTHAKIATGKKENKFGIDYDHARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ +PGVK + +HIGSQ+ + F A++ + L QLR +G +I +D+GGGL Sbjct: 181 IYRRAAAMPGVKPVAIAVHIGSQLTDLAPFRAAYERVAALLHQLREDGLDINRLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP +DYA+++ GNL C I LEPGR LV + GILV++VI +K+ + Sbjct: 241 GITY-KNEAPPDLADYAAMVRSITGNLGCSITLEPGRSLVGNAGILVSRVIYVKQGLHRR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP+LYDAYH I + PA D + D+VGP+CE+GD A+ R + Sbjct: 300 FAIVDAAMNDLIRPSLYDAYHGIVPVAEPAADAVQEPYDVVGPVCESGDTFAVQRPLPPL 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 +L+ GAYGAV + TYNSR L+PE++VNG +F +IRPR T +E++ + +P WL Sbjct: 360 ADDELVAFLSAGAYGAVMASTYNSRPLVPEVLVNGDRFAVIRPRPTVEEMLAAERVPDWL 419 >gi|156972658|ref|YP_001443565.1| diaminopimelate decarboxylase [Vibrio harveyi ATCC BAA-1116] gi|156524252|gb|ABU69338.1| hypothetical protein VIBHAR_00310 [Vibrio harveyi ATCC BAA-1116] Length = 417 Score = 315 bits (808), Expect = 7e-84, Method: Composition-based stats. Identities = 189/420 (45%), Positives = 264/420 (62%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE+VSL+ LA TP Y YS +E+++ F +A +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAEDVSLQALAEQHGTPLYVYSRATLERHWNAFDSAVGQYPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS GEL R +AA A+++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGDAKKVVFSGVGKTPAEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGELGVVAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y +A +LP + + G+D HIGSQ+ +IE F A L L L++ G NI+H+DVGGG Sbjct: 181 AVYKFAQSLPNLNVQGIDCHIGSQLTEIEPFIDATDRLLALIDDLKAQGINIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ GIL+T+V +K + K Sbjct: 241 LGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGILLTRVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + G+ D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVSPREGEA--HTYDLVGPICETGDFLGKDRAL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + GAYG V S YN+R E+MV+G+Q H++R R L +L+ +P Sbjct: 358 LQEGDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGNQSHLVRQREELTSLWQLEQILPE 417 >gi|167625818|ref|YP_001676112.1| diaminopimelate decarboxylase [Shewanella halifaxensis HAW-EB4] gi|167355840|gb|ABZ78453.1| diaminopimelate decarboxylase [Shewanella halifaxensis HAW-EB4] Length = 414 Score = 315 bits (807), Expect = 8e-84, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 264/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L+AE + +LA TP Y YS +E+++ F NA ++CYA+K Sbjct: 1 MDHFLYQADELYAEQCQVAELAKQHGTPLYIYSRATLERHWHAFDNAVSDHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT++E+++AL GIY Sbjct: 61 ANSNIAVLNVLARLGSGFDIVSGGELSRVIEAGGDPAKVVFSGVGKTVEEMEMALNLGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A+ LGK AP++ RVNPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESAAELEQLNLVALRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMEGAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++ A+ LPG+++ GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 IFTRANELPGLEVKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLAEQGIEIKHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP YA+ + + K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTYDEE-VPPQPDVYAAALLERLDGRDLKLIFEPGRAIAANAGIFVTQVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP+LY A+ +I ++ AG+ D+VGP+CETGDF+ +R++ + Sbjct: 300 FALVDGAMNDLIRPSLYSAWQKIIPVIERAGE--MQTYDVVGPVCETGDFLGKDRELNIL 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L I +GAYG S YNSR E+MV+G + ++IR R +L + + I Sbjct: 358 -AGDYLAIRSSGAYGFTMSSNYNSRPRAAELMVDGDKAYVIREREKLAQLWQGEQI 412 >gi|78357021|ref|YP_388470.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219426|gb|ABB38775.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 415 Score = 315 bits (807), Expect = 9e-84, Method: Composition-based stats. Identities = 173/414 (41%), Positives = 250/414 (60%), Gaps = 3/414 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + L ENV++++L TP Y YS ++++ F +AF + + CY++K Sbjct: 1 MHHFTYRDNELFVENVAVQELVATYGTPLYIYSKATFQRHFTAFDSAFGALPHLTCYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SN +++ L +G+G+DIVS GEL RAL A + +IV+SGVGKT EI AL++GI Sbjct: 61 ACSNMHILRFLGKMGAGMDIVSGGELFRALRAGIQPAKIVYSGVGKTRTEILQALEAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ +++ A G A +A R+NPD++ +TH ISTG KE+KFG+ + Q ++ Sbjct: 121 MFNVESMGELEKISEVANQTGHTANVALRINPDVDPHTHPYISTGLKENKFGLDMEQSYA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A LP + G+D HIGSQ+ + F +A + + ++L S G I +ID+GGGL Sbjct: 181 AYMRAMELPAITPMGIDCHIGSQLTSLSPFREAVEKILLFREKLCSAGLCIDYIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y PP ++ L+ L +ILEPGR + + GILVTKV KK+A K Sbjct: 241 GIPY-DTEEPPHPQEFGKLLTDMLSGLGITLILEPGRVIAGNAGILVTKVQYTKKTATKE 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D AMND +RP+LY ++H I + R D+VGPICE+GDF+A +R + Sbjct: 300 FVIVDAAMNDLIRPSLYQSHHHIAEVS--PRGRAKHTVDVVGPICESGDFLARDRLMPAV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 P +LL + GAYG S YNSR E++V G H+IR R T+++LI + Sbjct: 358 EPRELLAVFSAGAYGFTMSSQYNSRPRAAEVLVRGDTAHLIRRRETYEDLIAPE 411 >gi|148262316|ref|YP_001229022.1| diaminopimelate decarboxylase [Geobacter uraniireducens Rf4] gi|146395816|gb|ABQ24449.1| diaminopimelate decarboxylase [Geobacter uraniireducens Rf4] Length = 417 Score = 315 bits (807), Expect = 9e-84, Method: Composition-based stats. Identities = 181/420 (43%), Positives = 267/420 (63%), Gaps = 3/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L+AE+V+++ + V +P Y YS +E+++ AF + +CY++K Sbjct: 1 MHHFQYKGKELYAEDVAIKDIVAKVGSPVYIYSQATLERHFKAMDEAFAAVPHTICYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+K +LG G+DIVS GEL RAL A V +++V+SGVGK DEI+ AL +GI Sbjct: 61 ANSNLAVVKNFINLGGGVDIVSGGELYRALKAGVDPQKVVYSGVGKKDDEIEYALNTGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE EL +++ A +GKKA IA RVNPD++ TH I+TG K KFGI I + Sbjct: 121 MFNVESEQELTRISEIASRMGKKAGIAIRVNPDVDPQTHPYITTGLKNAKFGITIERAIE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A LPG++I G+D HIGSQ+ ++ F A K L+++ L+ G ++++ D+GGGL Sbjct: 181 EYRRAKDLPGIEILGIDCHIGSQLTKVTPFVDAIKKLKNVINTLKGMGISLKYFDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ + PP +DY + I +L ++ EPGR LV + GILV + K+ +K Sbjct: 241 GIQYNDE-APPLPADYGTEILAETKDLGLHLLFEPGRNLVGNAGILVATCLYTKQRDEKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+++D MND RP LY +YH + +VN I ADIVGPICE+GDF+A +R++ + Sbjct: 300 FIMIDAGMNDLARPALYGSYHGVKPVVNDQDGV--IVADIVGPICESGDFLAKDREVPMF 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 + GD++ GAYG S +YNSR + E+MV G +F ++R R T ++LI+ + +PA+L Sbjct: 358 KQGDMMAFMSAGAYGFAMSSSYNSRPRVAEVMVKGDRFEVVRERETVEDLIKGEKVPAFL 417 >gi|163803627|ref|ZP_02197492.1| diaminopimelate decarboxylase [Vibrio sp. AND4] gi|159172575|gb|EDP57435.1| diaminopimelate decarboxylase [Vibrio sp. AND4] Length = 417 Score = 315 bits (806), Expect = 9e-84, Method: Composition-based stats. Identities = 189/420 (45%), Positives = 265/420 (63%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE+VSL+ LA TP Y YS +E+++ F +A +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAEDVSLQVLAKQYGTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS GEL R +AA A+++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGDAKKVVFSGVGKTPAEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGELGVVAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y +A +LP + + G+D HIGSQ+ +IE F A L L L++ G +I+H+DVGGG Sbjct: 181 AVYQFAQSLPNLNVQGIDCHIGSQLTEIEPFIDATDRLLTLIDGLKAQGIDIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ GIL+T+V +K + K Sbjct: 241 LGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGILLTRVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I +V + + D+VGPICETGDF+ +R +A Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVV--PREGETQNYDLVGPICETGDFLGKDRALA- 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + GAYG V S YN+R E+MV+G+Q H++R R L +L+ +P Sbjct: 358 LQEGDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGNQSHLVRQREELTSLWQLEQILPE 417 >gi|331005625|ref|ZP_08328994.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC1989] gi|330420550|gb|EGG94847.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC1989] Length = 417 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 182/416 (43%), Positives = 253/416 (60%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y + L E +SL+ +A TP Y YS A ++Y + +A M+CYA+K Sbjct: 1 MNHFYYQQQQLMCEQLSLDTIAKQYGTPAYVYSRAAFTQHYCEYRDALGDHPGMICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R + A +RIVFSGV KT E+ AL+ G+Y Sbjct: 61 ANSNIAVLNVLAKLGSGFDIVSIGELERVIQAGGDPQRIVFSGVAKTEGEMRRALELGVY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES EL L A S+G +API+ RVNPD++A TH ISTG KE+KFG+ I Sbjct: 121 CFNIESIPELSRLQTVAESMGVQAPISLRVNPDVDAETHPYISTGLKENKFGVDIDHAVE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y +A+TLP + I GVD HIGSQ+ + F A + L QL G I+H+D+GGGL Sbjct: 181 IYQHAATLPNLTIKGVDCHIGSQLTSVAPFLDALDRVLALIDQLAEQGIIIEHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + +PP DY + + + EPGR + A+ G+L+TKV +K + K Sbjct: 241 GVVYNDE-QPPKIGDYIDEVKRRIAGRNLSLSFEPGRSIAANAGVLLTKVEFLKPTEHKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP+LY A+ ++ + D D+VGP+CETGDF+A +R++A Sbjct: 300 FAIIDAGMNDNIRPSLYRAWQKVLPVTETKADTATELWDLVGPVCETGDFLAKDRELA-L 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L + +GAYG S YNSR EIMV+G + HIIR R T +L++ +++ Sbjct: 359 DEGDYLALMSSGAYGFTMSSNYNSRGRAIEIMVDGDKSHIIRQRETVADLVKGEAL 414 >gi|307823078|ref|ZP_07653308.1| diaminopimelate decarboxylase [Methylobacter tundripaludum SV96] gi|307735853|gb|EFO06700.1| diaminopimelate decarboxylase [Methylobacter tundripaludum SV96] Length = 415 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 181/416 (43%), Positives = 252/416 (60%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE++++ + + +P Y YS +E+++ F AF ++CYA+K Sbjct: 1 MDYFNYRNDELFAEDIAVSDIVYKYGSPCYIYSRATLERHWKAFDQAFGEQAHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN A++ LA LGSG DIVS GEL R + A ++IVFSGVGK DEI AL+ GI Sbjct: 61 ANSNIAILNLLARLGSGFDIVSLGELERVITAGGDPKKIVFSGVGKREDEILAALKIGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+E EL +N+ A LG AP++FRVNPD++A TH ISTG KE+KFGI I Q + Sbjct: 121 CFNIEVSGELDRINRLAGQLGVIAPVSFRVNPDVDAKTHPYISTGLKENKFGIDIQQALT 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A+ +P + + G+D HIGSQ+ + F A + DL L + G + H+D+GGGL Sbjct: 181 EYRRAAAMPHISVIGIDCHIGSQLTETRPFLDALDKILDLVAALEAEGIKLHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + +PP ++Y + G +I+LEPGR +V + GILVT+V +K +A+K Sbjct: 241 GICYKDE-QPPEPAEYIQAVLARLGQTDFEILLEPGRAIVGNAGILVTQVEYLKPTANKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ VN + DIVGP+CETGDF+ +R + Sbjct: 300 FAIVDAAMNDLVRPALYSAWQ-NIIPVNRQNNAAEATWDIVGPVCETGDFLGKDRTL-KI 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL I +GAYG S YNSR + E++V+GS H+IR R T +L + + Sbjct: 358 AQGDLLAIRSSGAYGFTMSSNYNSRPRLAELIVDGSNLHVIRERETIAQLWAGEHL 413 >gi|77163847|ref|YP_342372.1| diaminopimelate decarboxylase [Nitrosococcus oceani ATCC 19707] gi|254436067|ref|ZP_05049574.1| diaminopimelate decarboxylase [Nitrosococcus oceani AFC27] gi|76882161|gb|ABA56842.1| diaminopimelate decarboxylase [Nitrosococcus oceani ATCC 19707] gi|207089178|gb|EDZ66450.1| diaminopimelate decarboxylase [Nitrosococcus oceani AFC27] Length = 417 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 194/419 (46%), Positives = 259/419 (61%), Gaps = 4/419 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE + L ++A TP Y YS AIE + F AF+ +CYA+K Sbjct: 2 MEYFHYRYNVLWAEEIPLPEIASRFDTPCYVYSRAAIEHQWRAFDQAFEKHPHQICYAVK 61 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R LAA RIVFSGVGK DE++ AL GI Sbjct: 62 ANSNLAVLNILARLGSGFDIVSVGELERVLAAGGDPGRIVFSGVGKRADEMERALAVGIA 121 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL LN+ A L ++AP++ RVNPD++A TH I+TG +++KFGI I Q + Sbjct: 122 CFNVESEAELIRLNEIAGKLEQRAPVSLRVNPDVDARTHPYIATGLRDNKFGIEIDQALA 181 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+TLP + I GVD HIGSQ+ + F A + + L QL G I+HID+GGGL Sbjct: 182 VYARAATLPHIDILGVDCHIGSQLTSLSPFLAALERVLALVDQLAERGIKIRHIDLGGGL 241 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PPS YA+ + Q +I +EPGR +V + G+L+T++ +K++ K Sbjct: 242 GIIYRDE-APPSPQQYAAALRQKLAGRNLEIWIEPGRAIVGNGGVLLTRIEYLKQAPQKN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LYDA+ EI + A D+VGP+CETGDF+ R++A Sbjct: 301 FAIVDAAMNDLLRPALYDAWQEIIPVAVDATGEPLF-FDVVGPVCETGDFLGKRRQLA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 GDLL + GAYG S YNSR EIMV+G++ H++R R T + L + ++P Sbjct: 359 EAGDLLVVRAAGAYGFTMSSNYNSRPRAAEIMVDGAEAHLVRERETVESLYRGEATLPG 417 >gi|88797197|ref|ZP_01112787.1| LysA [Reinekea sp. MED297] gi|88780066|gb|EAR11251.1| LysA [Reinekea sp. MED297] Length = 416 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 177/415 (42%), Positives = 247/415 (59%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE VS+E+LA+ TP Y YS AIE + + ++CYA+K Sbjct: 1 MVPFHYQNDQLFAEQVSVEQLANTYGTPLYIYSRQAIEHQFDAYQQGLGDHPGLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA G+G DIVS GEL R LAA E+IVFSGV K E+ AL+ GI+ Sbjct: 61 ANSNLGVLSLLAKRGAGFDIVSIGELERVLAAGGAPEKIVFSGVAKKASEMRRALEVGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES++EL+ LN A +G +API+ RVNPD++A TH ISTG K++KFG+ + Sbjct: 121 CFNVESQAELERLNSVAGDMGIQAPISLRVNPDVDAKTHPYISTGLKQNKFGVDHRLARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A+ L +++ G+D HIGSQ+ + + F A L L +L+ +G ++HID+GGG+ Sbjct: 181 FYQRANELQHIRVIGMDCHIGSQLLEAKPFEDAVDRLLTLLDELKQDGIALEHIDMGGGI 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y P +Y + + + +ILEPGR +VA+ GILVT+V +K + + Sbjct: 241 GVKYTDQDIEPDVRNYIRKLVGHLKDRNLALILEPGRSIVANAGILVTEVEYLKDNGEHH 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY A+ +I VN D DIVGPICETGDF+ R ++ Sbjct: 301 FGIVDAGMNDLIRPALYQAWMDIV-PVNRNADGHSASWDIVGPICETGDFLGKARDLS-L 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDLL ++ GAY V + YN+R E++V G ++R R T +L L+S Sbjct: 359 TPGDLLAVKSAGAYSFVMASNYNTRERPAEVLVQGDAHTVVRQRETLTDLWALES 413 >gi|330501238|ref|YP_004378107.1| diaminopimelate decarboxylase [Pseudomonas mendocina NK-01] gi|328915524|gb|AEB56355.1| diaminopimelate decarboxylase [Pseudomonas mendocina NK-01] Length = 415 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 193/416 (46%), Positives = 265/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L LA TP Y YS IE Y +++A GM +VC+A+K Sbjct: 1 MEAFNYRDGELFAEGVALSALAQRFGTPTYVYSRAHIEWQYRAYADALAGMPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA RIVFSGVGK+ D++ AL+ G++ Sbjct: 61 ANSNIGVLNVLARLGAGFDIVSSGELERVLAAGGEPSRIVFSGVGKSRDDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L + A LG KAP++ RVNPD++A TH ISTG KE+KFGI I Q + Sbjct: 121 CFNVESSVELERLQKVAAELGVKAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIEQAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LP + + GVD HIGSQ+ +E F A L L +L G I+H+D+GGGL Sbjct: 181 VYARAAELPNLDVIGVDCHIGSQLTTLEPFLDALDRLLLLVDKLAERGITIKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP + DY + + + ++ EPGRF+VA+ G+L+T+V +K + K Sbjct: 241 GVQYRDE-QPPLAGDYIAAVRKRLAGRDLSLVFEPGRFIVANAGVLLTQVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ +++ + G+ + D+VGPICETGDF+A +R++ + Sbjct: 300 FAIVDAAMNDLIRPALYQAWMDVSPVQPREGEARN--YDLVGPICETGDFLAKDRQL-VL 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V S YN+R E+MV+G Q +R R T QEL +S+ Sbjct: 357 EEGDLLAVRSAGAYGFVMSSNYNTRGRAAEVMVDGEQAFEVRRRETVQELYAGESL 412 >gi|148978773|ref|ZP_01815153.1| diaminopimelate decarboxylase [Vibrionales bacterium SWAT-3] gi|145962194|gb|EDK27478.1| diaminopimelate decarboxylase [Vibrionales bacterium SWAT-3] Length = 417 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 192/420 (45%), Positives = 267/420 (63%), Gaps = 5/420 (1%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L AE+V+L +LA TP Y YS +E+++ F ++ +VCYA+ Sbjct: 1 MDYFNYQEDGQLWAEDVALSQLAEQYGTPLYVYSRATLERHWNAFDSSVGEHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R +AA ++VFSGVGKT E+ AL+ I Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSGGELERVVAAGGDPAKVVFSGVGKTAAEMKRALELNI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG KAPI+ R+NPD++ANTH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGELGVKAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++YA+A TL + I G+D HIGSQ+ IE F A L L QLR++G NI+H+DVGGG Sbjct: 181 AVYAFAQTLENLSIHGIDCHIGSQLTDIEPFIDATDRLLALIDQLRADGINIKHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVVYRDELPPQPSDYAKALLARLENHSDLELIFEPGRAIAANAGVLLTKVEFLKPTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I ++ G+ + D+VGPICETGDF+ +R++ + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVIPRQGEA--VTYDLVGPICETGDFLGKDREL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 GDLL + GAYG V S YN+R E+MV+G++ H++R R L EL+ +P Sbjct: 358 LEEGDLLAVRSAGAYGFVMSSNYNTRSRAAEVMVDGNKTHLVRQREELTSLWELENILPE 417 >gi|332704148|ref|ZP_08424236.1| diaminopimelate decarboxylase [Desulfovibrio africanus str. Walvis Bay] gi|332554297|gb|EGJ51341.1| diaminopimelate decarboxylase [Desulfovibrio africanus str. Walvis Bay] Length = 420 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 181/414 (43%), Positives = 256/414 (61%), Gaps = 3/414 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y G LHAE++ +E LA TP Y YS +++ F +AF + + CY++K Sbjct: 1 MHHFEYHNGRLHAEDIPVEDLARQFGTPLYVYSKATFSRHFQAFDSAFSALPHITCYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V++ LA LG+G+DIVS GEL RAL A V E+IV+SGVGK +EI AL +GI Sbjct: 61 ANSNLCVLRLLASLGAGMDIVSGGELHRALKAGVSPEKIVYSGVGKRPEEIRQALDAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+T++ A G+ A I+ R+NPD++ TH ISTG K++KFG+ + Sbjct: 121 MFNVESREELRTISAIASESGRIARISLRINPDVDPKTHPYISTGMKKNKFGLDMETSLE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A LPG++ G+D HIGSQ+ IE F +A L + +LR G +I+++D+GGGL Sbjct: 181 TYRMAKGLPGIEPVGIDCHIGSQLTSIEPFLEALDKLVEFYGKLREMGIDIRYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ + PP + + + L IILEPGR + + GILVTKV+ K + K Sbjct: 241 GITYNEE-EPPHPEAFGKALTERLKGLPLTIILEPGRVIAGNAGILVTKVLYTKSTPSKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D AMND +RP+LY ++H I +V +R I+ D+VGPICE+GDF+A +R++ Sbjct: 300 FVIVDAAMNDLVRPSLYGSFHRIAEVVEH--NRPKINVDVVGPICESGDFLARDRELPNV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 G+LL GAYG S YNSR E+MV+G + R R T+ +L+ + Sbjct: 358 ESGELLAAFSAGAYGFAMSSQYNSRPRAAEVMVDGEVTVLARRRETYDDLVAAE 411 >gi|254000301|ref|YP_003052364.1| diaminopimelate decarboxylase [Methylovorus sp. SIP3-4] gi|253986980|gb|ACT51837.1| diaminopimelate decarboxylase [Methylovorus sp. SIP3-4] Length = 415 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 190/416 (45%), Positives = 265/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+AF+ G LHAE V L +LA TP Y YS A+E Y F F G+D +VC+A+K Sbjct: 1 MNAFQLKNGQLHAEQVPLNQLAEEFSTPCYVYSRQALETAYRDFQQGFAGVDHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN + V+ A LG+G DIVS GEL R LAA A ++VFSGVGKT DE+ AL +GI+ Sbjct: 61 ANPSLGVLSVFAKLGAGFDIVSGGELARVLAAGGDASKVVFSGVGKTADEMRAALTAGIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN+ A S+GK AP++ RVNP+++A TH ISTG K +KFG+ Q + Sbjct: 121 CFNVESAAELERLNEVAGSMGKIAPVSLRVNPNVDAKTHPYISTGLKNNKFGVAYEQSLA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY A+ +P + + GVD HIGSQ+ ++ F AF + L QL + G I+HID GGG+ Sbjct: 181 LYQQAAAMPNIDVHGVDCHIGSQLTELSPFLDAFDRVLALVDQLEAAGIAIRHIDAGGGI 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ + PP + YA+ + + G+ + K++ EPGR LV + G L+T+V +K + K Sbjct: 241 GICYNEE-TPPDFAAYAAAMLKKLGDRKVKLVFEPGRALVGNAGALLTRVEYLKHTEAKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND MRP LYDAYH+I + +IVGP+CE+GDF+ +R++ Sbjct: 300 FAIVDAAMNDLMRPALYDAYHQIAEVS--PDATPKEIYEIVGPVCESGDFLGHDRELG-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL I GAYG S YN+R E+MV+G+ + +IR R + EL L+++ Sbjct: 357 KQGDLLAILSAGAYGMSMSSNYNTRPRAAEVMVDGASYQLIRKRESISELFALENV 412 >gi|258405461|ref|YP_003198203.1| diaminopimelate decarboxylase [Desulfohalobium retbaense DSM 5692] gi|257797688|gb|ACV68625.1| diaminopimelate decarboxylase [Desulfohalobium retbaense DSM 5692] Length = 418 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 177/415 (42%), Positives = 254/415 (61%), Gaps = 3/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L AE + +LA TP Y YST + ++Y F +AF+G+D + C++ K Sbjct: 1 MHHFVYKDGRLQAEEFDVAELAATYGTPLYIYSTATLRRHYHAFDSAFEGLDHLTCFSAK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN +V++ L +G+G+DIVS GEL RAL A + E+IV+SGVGK EI+ AL++ I Sbjct: 61 ANSNLSVLRLLGDMGAGVDIVSGGELYRALKAGIAPEKIVYSGVGKQRHEIEQALEADIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN ES EL+ +N+ A G A I+ R+NPD++ TH ISTG K++KFG+ + Q Sbjct: 121 MFNCESVPELELINEVAQEKGLVARISLRINPDVDPQTHPYISTGLKKNKFGLNLEQSEE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A LPGV G+D HIGSQ+ IE F +A + L+ +L+ G I+++D+GGGL Sbjct: 181 AYRLARDLPGVDPIGMDCHIGSQLTSIEPFLEALERLKRFYAKLQDMGLAIRYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP + + +L +ILEPGR + + GI+V+KV+ K S K Sbjct: 241 GITYDEE-TPPHPQQLGEALAESLKDLDVTLILEPGRVIAGNAGIMVSKVLYTKTSEAKH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP+LY AYH + + R + DIVGPICETGDF+A +R + Sbjct: 300 FTVVDAAMNDLVRPSLYGAYHRLAEVTPQ--KRQELPMDIVGPICETGDFLAQDRTLPEL 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PG+ + GAYG + YNSR EI+V+G Q I+R R T+++LI L++ Sbjct: 358 APGECIAAFSAGAYGFTMASQYNSRPRAAEILVDGDQARIVRRRETYEDLIALET 412 >gi|86148171|ref|ZP_01066469.1| diaminopimelate decarboxylase [Vibrio sp. MED222] gi|218710945|ref|YP_002418566.1| diaminopimelate decarboxylase [Vibrio splendidus LGP32] gi|85834018|gb|EAQ52178.1| diaminopimelate decarboxylase [Vibrio sp. MED222] gi|218323964|emb|CAV20326.1| Diaminopimelate decarboxylase [Vibrio splendidus LGP32] Length = 417 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 191/420 (45%), Positives = 262/420 (62%), Gaps = 5/420 (1%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L AE+V+L +LA TP Y YS +E+++ F ++ +VCYA+ Sbjct: 1 MDYFNYQEDGQLWAEDVALSQLAEQYGTPLYVYSRATLERHWNAFDSSVGEHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R +AA ++VFSGVGKT E+ AL+ I Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSGGELERVVAAGGDPAKVVFSGVGKTAAEMKRALELNI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG KAPI+ R+NPD++ANTH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGELGVKAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++YA+A TL + I G+D HIGSQ+ IE F A L L QLR+N NI+H+DVGGG Sbjct: 181 AVYAFAKTLDNLSIHGIDCHIGSQLTDIEPFIDATDRLLALIDQLRANDINIKHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVVYRDELPPQPSDYAKALLARLDNHSDLELIFEPGRAIAANAGVLLTKVEFLKPTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + G+ + D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVSPRQGEA--VTYDLVGPICETGDFLGKDRDL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 GDLL + GAYG S YN+R E+MV+G + H++R R L EL+ +P Sbjct: 358 LEEGDLLAVRSAGAYGFAMSSNYNTRSRAAEVMVDGDKTHLVRQREELTSLWELENILPE 417 >gi|251772324|gb|EES52892.1| diaminopimelate decarboxylase [Leptospirillum ferrodiazotrophum] Length = 413 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 269/416 (64%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS+F+Y G L EN+ +E++ +P Y YS A+ + + AF T+V YA+K Sbjct: 1 MSSFEYRNGRLFVENLPVEEIVEKEGSPLYIYSKKALVERIRAYREAFAAHPTLVAYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN N A++ LA G+G+D+VS GEL RA A VPA++IVF+GVGK+ +EI AL+ I Sbjct: 61 ANGNLAILSLLAKEGAGIDVVSGGELFRARKAGVPADKIVFAGVGKSREEIAYALKEKIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES+ EL +++ AV+LG +AP+A RVNPD++ TH ISTG K+ KFGIP+ + + Sbjct: 121 MFNVESQDELDHISEVAVALGTQAPVALRVNPDVDPKTHPYISTGMKKSKFGIPVERAVA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y ASTLPG+KI G+ HIGSQ+ +I F AF L +L G + H+D+GGGL Sbjct: 181 EYQRASTLPGIKIVGIHQHIGSQLTEIAPFRDAFDRLLAFHGELSRAGIKVTHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y S+ PPS +D A+L+ +L ++LEPGR +V + GILVT+V+ K +A K+ Sbjct: 241 GIRYRSE-EPPSPADLAALVLPRVKDLGVTLVLEPGRSIVGNAGILVTRVLYRKNTAVKS 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI D MND +RP+LY A+H++ + G+ I D+VGPICETGDF+A +R++ Sbjct: 300 FVIGDAGMNDLLRPSLYGAHHDLLPVKETKGE--TIKGDLVGPICETGDFLATDREMPDF 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + GAYG + YN+R EI+V+GS + ++R R +F++LI + + Sbjct: 358 AAGDLIAVMSAGAYGFSMASNYNARPRPAEILVDGSSYRVVRDRESFEDLIRGERV 413 >gi|262198680|ref|YP_003269889.1| diaminopimelate decarboxylase [Haliangium ochraceum DSM 14365] gi|262082027|gb|ACY17996.1| diaminopimelate decarboxylase [Haliangium ochraceum DSM 14365] Length = 425 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 171/424 (40%), Positives = 251/424 (59%), Gaps = 7/424 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y + L+ E+V L ++A V TP Y YS + ++ F A G+ +VC+++K Sbjct: 1 MNHFAYRDDELYCEDVPLARIADEVGTPVYVYSHATLTRHLQVFDAALSGVPHLVCFSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N N AV++ L LG+G DIVS GEL R L A ++VFSGVGKT EI AL++GI Sbjct: 61 SNPNLAVLRLLFQLGAGADIVSGGELARVLRAGGDPAKVVFSGVGKTDAEIAAALRAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE EL ++ A +G +AP++ R+NPD++A TH I+TG KE KFGI + + Sbjct: 121 AFNVESEEELHAIDAVAADMGARAPVSLRINPDVDAQTHPYIATGLKESKFGIAMAEARR 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG-- 238 +YA A TL V I GVD HIGSQ+ + + F A L L ++L ++G ++++D+GG Sbjct: 181 VYALARTLAHVDIVGVDCHIGSQLTRTDPFSDAVSRLLGLIEELHADGVALRYLDIGGGL 240 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQY----FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 G+ PPS ++Y I II EPGR + + G L+T+V+ K Sbjct: 241 GIPYEGDGAAPPPSPAEYGDAIKSALAPLKLPTPLTIICEPGRVITGNAGALLTRVLYRK 300 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + K F ++D AMND +RP+LY +YH + +V A R D+VGPICE+GDF+A + Sbjct: 301 HAEAKHFTVVDAAMNDLIRPSLYGSYHPMRPVVR-AAQRPQQVTDVVGPICESGDFLARD 359 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R++ G+LL I GAYG + YNSR E+MV G +F ++R R + ++L + Sbjct: 360 RELPALERGELLAIGAAGAYGFAMASNYNSRPRAAEVMVRGDRFAVVRARESVEQLFADE 419 Query: 415 SIPA 418 +IP Sbjct: 420 AIPD 423 >gi|219871605|ref|YP_002475980.1| diaminopimelate decarboxylase [Haemophilus parasuis SH0165] gi|219691809|gb|ACL33032.1| diaminopimelate decarboxylase [Haemophilus parasuis SH0165] Length = 419 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 190/416 (45%), Positives = 267/416 (64%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE+V++ + TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MDYFHYKNQQLFAEDVAIADIIAQHGTPAYIYSRATLERHWHAFDKAFGDHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R LAA A ++VFSGV KT EI AL+ GI Sbjct: 61 SNSNLALLNVMARLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKTHREIARALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +N+ A LGK API+ RVNPD++A TH ISTG KE+KFG+ + + Sbjct: 121 CFNVESVSELKRINEVAGQLGKIAPISLRVNPDVDAKTHPYISTGLKENKFGVSVKEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y +A+TLP VKI+G+D HIGSQ+ +++ F A + L +QL+ +G + H+D+GGGL Sbjct: 181 VYRFATTLPHVKITGMDCHIGSQLTELQPFLDATDRVIVLMEQLKQDGIELHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P A+L+++ +IILEPGR + A+ GILVTKV IK++ D+ Sbjct: 241 GVTYTDETPPHPMEYAAALLNKLRAYPNLEIILEPGRAITANAGILVTKVEYIKQNEDRR 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY VN + R D+VGPICET DF+ R++A Sbjct: 301 FAIVDTGMNDMIRPALYEAYM-QIIEVNQSLVREKAIYDVVGPICETSDFLGKQRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + GAYGA S TYNSR E+MV+G + H+I+ R +F++L L++I Sbjct: 359 AEGDLIAMRSAGAYGATMSSTYNSRPQAIEVMVDGDKAHLIKARASFEDLWRLENI 414 >gi|269103729|ref|ZP_06156426.1| diaminopimelate decarboxylase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163627|gb|EEZ42123.1| diaminopimelate decarboxylase [Photobacterium damselae subsp. damselae CIP 102761] Length = 417 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 189/417 (45%), Positives = 252/417 (60%), Gaps = 4/417 (0%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L AE VS + LA TP Y YS +E+++ F A ++CYA+ Sbjct: 1 MDYFNYQQDGQLWAEQVSAQSLAAQYGTPLYVYSRATLERHWQAFDRAVASHPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AV+ LA LGSG DIVS GEL R +AA ++VFSGVGKT+ E+ AL GI Sbjct: 61 KANSNLAVLNVLAKLGSGFDIVSLGELERVIAAGGDPSKVVFSGVGKTVAEMTRALSLGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LNQ A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNQVAAELGVIAPISLRINPDVDAKTHPYISTGLRDNKFGITFERAL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A LP + + G+D HIGSQ+ +I F A L L L G I H+DVGGG Sbjct: 181 DVYRLAHRLPNLNVVGMDCHIGSQLTEITPFIDAVDRLLSLIDTLADEGITIAHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ GIL+T+V +K S K Sbjct: 241 LGVTYDQEQPPEPSDYAIALLERLNQYPELELIFEPGRAIAANAGILLTRVEYLKHSEYK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RPTLY A+ I G+ DIVGPICETGDFI +R++A Sbjct: 301 NFAIVDAAMNDLIRPTLYSAWQAIIPASPRQGE--MQTYDIVGPICETGDFIGRDRQLA- 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 P DLL + GAYG V + YN+R E+MV+G Q +++R R T Q+L + +S+ Sbjct: 358 LEPNDLLAVRSAGAYGFVMASNYNTRARAAEVMVDGEQSYLVRQRETLQQLWQGESL 414 >gi|330444897|ref|ZP_08308552.1| diaminopimelate decarboxylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489207|dbj|GAA03049.1| diaminopimelate decarboxylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 416 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 183/417 (43%), Positives = 257/417 (61%), Gaps = 4/417 (0%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y L AE+V L +LA TP Y YS +E+++ F A ++CYA+ Sbjct: 1 MDHFNYQQNDQLWAEDVPLAQLAEQYGTPLYVYSRATLERHWKAFDEAVATQPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS+GEL R +AA ++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNVLARLGSGFDIVSQGELERVIAAGGDPAKVVFSGVGKTSAEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNLVAEQLGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFERAV 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A +LP +K+ G+D HIGSQ+ +I F A L L +L++ G I+H+D+GGG Sbjct: 181 EVYRLAHSLPHLKVVGMDCHIGSQLTEITPFIDATDRLLALVDELKAEGIAIEHLDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P + +L+ + + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVTYSDEQPPLPADYAKALLGRLESYPELELIFEPGRAIAANAGVLLTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RPTLY A+ +I + G+ D+VGPICETGDFI +R + L Sbjct: 301 NFAIVDAAMNDLIRPTLYSAWQDIVPVTPRQGEA--QVYDLVGPICETGDFIGKDRSLCL 358 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL + GAYG V + YN+R E++V+G Q H++R R T +L +L+ I Sbjct: 359 AQ-GDLLAVRSAGAYGFVMASNYNTRARAAEVIVDGEQVHLVRERETLAQLWQLEHI 414 >gi|145632076|ref|ZP_01787811.1| diaminopimelate decarboxylase [Haemophilus influenzae 3655] gi|144986983|gb|EDJ93513.1| diaminopimelate decarboxylase [Haemophilus influenzae 3655] Length = 415 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 185/415 (44%), Positives = 264/415 (63%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKHNKLYAEDIPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ + + Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVDEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I +R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIIEIDRTL-EREKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD + GAYGA S YNSR E++V+G Q ++IR R T QEL L+S Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRARTAEVLVDGDQSYLIRRRETLQELWALES 413 >gi|319775330|ref|YP_004137818.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus influenzae F3047] gi|329122674|ref|ZP_08251252.1| diaminopimelate decarboxylase [Haemophilus aegyptius ATCC 11116] gi|317449921|emb|CBY86133.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus influenzae F3047] gi|327472548|gb|EGF17978.1| diaminopimelate decarboxylase [Haemophilus aegyptius ATCC 11116] Length = 415 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 185/415 (44%), Positives = 265/415 (63%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKHNKLYAEDIPIQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ +++ Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I +R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIVEIDRTL-EREKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD + GAYGA S YNSR E++V+G Q ++IR R T QEL L+S Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRARTAEVLVDGDQSYLIRRRETLQELWALES 413 >gi|149191481|ref|ZP_01869730.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] gi|148834669|gb|EDL51657.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] Length = 417 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 192/420 (45%), Positives = 264/420 (62%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE SL +LA TP Y YS +E+++ F + +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAEETSLTQLAEQYGTPLYVYSRATLERHWNAFDKSVGDHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R +AA ++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNIGVLNTLARLGSGFDIVSGGELERVVAAGGEPSKVVFSGVGKTAQEMRRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LNQ A +G API+ R+NPD++ANTH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNQVAGEMGVVAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y +A +LP + + G+D HIGSQ+ IE F A L L QLR++G NI+H+DVGGG Sbjct: 181 AVYKFAQSLPNLAVHGIDCHIGSQLTDIEPFIDATDRLLALIDQLRADGVNIKHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVVYRDELPPQPSDYAKALLARLENHPELELIFEPGRAIAANAGVLLTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + G+ I D+VGPICETGDFI +R + + Sbjct: 301 NFAIVDAAMNDLMRPALYQAWQDIIPVSPREGEA--ITYDLVGPICETGDFIGKDRSL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 DLL + GAYG V S YN+R + EI+V+G + H++R R + Q L EL+ +P Sbjct: 358 LEQNDLLAVRSAGAYGFVMSSNYNTRPRVAEIIVDGDKAHVVRQRESLQSLWELESILPE 417 >gi|83313590|ref|YP_423854.1| diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1] gi|82948431|dbj|BAE53295.1| Diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1] Length = 424 Score = 314 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 203/425 (47%), Positives = 284/425 (66%), Gaps = 3/425 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ F Y G L AE+V++ ++A V TPFYCYST ++++Y F+ A G+D +C+A Sbjct: 1 MNHFHYQNGELFAEDVAIARIAREVGTPFYCYSTATLQRHYTVFAEALKAAGLDATICFA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KAN N AVI+T A LG+G D+VSEGELR+ALAA VPA RIVFSGVGKT E++ A+ G Sbjct: 61 AKANPNMAVIRTFAQLGAGADVVSEGELRQALAAGVPAARIVFSGVGKTRHELEFAVAKG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ NVESE EL+ L++ A + G+ PIA RVNPD++A TH KI+TGKKE+KFGI + Sbjct: 121 IFQINVESEPELEMLSEIAAARGQVMPIAIRVNPDVDAGTHAKITTGKKENKFGIEWTRA 180 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 +YA A LPGV+ + HIGSQ+ ++ F +AF +RDL LR++G +I+ +D+GG Sbjct: 181 REVYARAKALPGVEPVAIACHIGSQLTELTPFREAFLRVRDLVAMLRADGIDIRRLDLGG 240 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 GLG+ Y + P + YA +I G+L C+ + EPGR LV + GILV+++I +K+ + Sbjct: 241 GLGVPYDDETP-PEPAAYAEVIKATLGDLGCRFVFEPGRLLVGNAGILVSRIIRVKEGST 299 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 +TF+I+D AMND RP+LYDAYH I + P D+VGP+CETGD A R++ Sbjct: 300 RTFLIVDAAMNDLARPSLYDAYHSIFPVAEPKAGAALAEVDVVGPVCETGDTFAKQRRLP 359 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 R DLL GAYGA S TYN+R LIPE++V G + +IR R +++++ L+S+P Sbjct: 360 PMRTDDLLAFGTAGAYGAAMSSTYNTRPLIPEVLVKGGDYAVIRVRPSYEDMRSLESLPG 419 Query: 419 WLQKT 423 WL Sbjct: 420 WLNDE 424 >gi|114770083|ref|ZP_01447621.1| diaminopimelate decarboxylase [alpha proteobacterium HTCC2255] gi|114548920|gb|EAU51803.1| diaminopimelate decarboxylase [alpha proteobacterium HTCC2255] Length = 421 Score = 314 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 200/421 (47%), Positives = 288/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+V++ ++A V TPFY YS + +++ F A +GM ++CYA+K Sbjct: 1 MDHFLYHKGILHAEDVAITEIAAAVGTPFYVYSQATLMRHFRVFDEALNGMKHLICYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN A++K L +LG+G+D+VS GE RA AA + ++IVFSGVGKT +E+ LA+++GI Sbjct: 61 ANSNIAILKILGNLGAGMDVVSGGEYLRAKAAGISGDKIVFSGVGKTREEMALAIKNGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE+ELK LN+ A+SLG API RVNPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEAELKVLNEVALSLGAIAPITLRVNPDVDAKTHAKIATGKSENKFGIPISKAQE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y+ A+++ + + G+D+HIGSQ+ +E F A+K + +LT+ LR +GHNI+ +D+GGGL Sbjct: 181 VYSIAASMEAIDVVGIDVHIGSQLTDLEPFRLAYKKVAELTKMLRQDGHNIRRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 +S+ PP+ DYA +IH+ G+L C+I +EPGR L + G++V+ VI K + Sbjct: 241 GIPYENSNQIPPTPEDYAKVIHETVGDLDCEIEIEPGRLLAGNAGLMVSSVIYNKSGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+I+D AMND +RP +Y+AYHEI ++ G DIVGP+CETGD A R + Sbjct: 301 DFMIVDAAMNDLIRPAMYEAYHEIIPVIETTGSPEIRDYDIVGPVCETGDTFANKRALTP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 G+++ GAYGAV + YN+R LIPE++V G QF IIR R + + +I+ D IP W Sbjct: 361 VADGEMVAFRSAGAYGAVMASEYNTRPLIPEVLVYGDQFSIIRNRPSIEAIIKRDIIPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|220933233|ref|YP_002512132.1| diaminopimelate decarboxylase [Thioalkalivibrio sp. HL-EbGR7] gi|219994543|gb|ACL71145.1| diaminopimelate decarboxylase [Thioalkalivibrio sp. HL-EbGR7] Length = 414 Score = 314 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 180/416 (43%), Positives = 257/416 (61%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y +G LHAE V L ++A TP Y YS +E+++ F A ++CYA+K Sbjct: 1 MDHFQYRDGVLHAEEVPLSQIAAAHGTPCYVYSRATLERHWRAFDTALGDHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANS+ AV+ LA LGSG DIVS GEL R L A A R+VFSGVGK DE+ AL+ GI Sbjct: 61 ANSSLAVLNVLARLGSGFDIVSVGELERVLRAGGEASRVVFSGVGKRADEMRRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL LN A LG +AP++ RVNPD++A TH ISTG KE+KFG+ I + Sbjct: 121 CFNVESEAELARLNGVAGELGVEAPVSIRVNPDVDARTHPYISTGLKENKFGVDIRVAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY A+ + +++ GVD HIGSQ+ + F A K + +L + L ++G + H+D+GGGL Sbjct: 181 LYRQAADMAHIRVVGVDCHIGSQLTGLSPFVDALKRVLELARTLEADGIGLDHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP YA + + + + +I+LEPGR + + G+L+T+V +K + K Sbjct: 241 GIRYRDE-EPPLPDAYARALFEGLADTRYEILLEPGRAIAGNAGVLLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP LY A+ EI + G+ D+VGP+CETGDF+ R + + Sbjct: 300 FAVVDAAMNDLIRPALYGAWQEIVPVAPRLGESR--TYDVVGPVCETGDFLGKERAL-VL 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 DLL + GAYG S YN+R E+MV+G Q H++ R + +EL+ +++ Sbjct: 357 AEDDLLAVRSAGAYGFTMSSNYNTRPRAAEVMVDGEQVHLVNRRESLEELMARETL 412 >gi|298293363|ref|YP_003695302.1| diaminopimelate decarboxylase [Starkeya novella DSM 506] gi|296929874|gb|ADH90683.1| diaminopimelate decarboxylase [Starkeya novella DSM 506] Length = 422 Score = 314 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 224/421 (53%), Positives = 293/421 (69%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE+ SL +AH V TPFY YST +E++Y F+ AF +CYALK Sbjct: 1 MHHFAYRDGLLHAEDASLVDIAHAVGTPFYAYSTATLERHYKVFTEAFADARATLCYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAVI T A LG+G DIVS GEL+RALAA + +IVFSGVGKT +E+ AL +G+ Sbjct: 61 ANSNQAVIATFAKLGAGADIVSGGELKRALAAGIAPHKIVFSGVGKTREEMAAALDAGVM 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL TL++ AVS G API+ RVNPD++A TH KISTGK E+KFGIPI + Sbjct: 121 CFNVESEPELLTLSEVAVSHGVAAPISVRVNPDVDAKTHHKISTGKSENKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y +A+ LPG++I+GVDMHIGSQI + F A LL +L + L ++GH + H+D+GGGL Sbjct: 181 VYRHAAALPGIRITGVDMHIGSQITDLTPFDNATALLVELARDLMADGHRLTHLDLGGGL 240 Query: 241 G-IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 G D PP YA L+ ++ NL ++ E GR LVA+ GILVT+V+ +K+ K Sbjct: 241 GVPYVAGDPEPPLPLHYAELVKRHTHNLGLGLVFEIGRMLVANAGILVTRVLYVKEGEGK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+HEI + I AD+VGP+CE+GDF+AL R++ Sbjct: 301 RFVIVDAAMNDLIRPTLYDAHHEILPVREAKSGEGQIVADVVGPVCESGDFLALGRRLPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL+ + TGAYGAVQ+ TYN+R L+PE++V G QF ++RPR+ LI LD +P W Sbjct: 361 LKAGDLVAVMTTGAYGAVQASTYNTRPLVPEVLVKGEQFALVRPRVDADALIALDRVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|145638478|ref|ZP_01794088.1| diaminopimelate decarboxylase [Haemophilus influenzae PittII] gi|145272807|gb|EDK12714.1| diaminopimelate decarboxylase [Haemophilus influenzae PittII] gi|309751609|gb|ADO81593.1| Diaminopimelate decarboxylase [Haemophilus influenzae R2866] gi|309973776|gb|ADO96977.1| Diaminopimelate decarboxylase [Haemophilus influenzae R2846] Length = 415 Score = 314 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 185/415 (44%), Positives = 264/415 (63%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKHNKLYAEDIPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ +++ Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDAADRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIIEIDRTLA-REKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD + GAYGA S YNSR E++V+G Q ++IR R T QEL L+S Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRPRTAEVLVDGDQSYLIRRRETLQELWVLES 413 >gi|90414245|ref|ZP_01222225.1| putative diaminopimelate decarboxylase [Photobacterium profundum 3TCK] gi|90324692|gb|EAS41233.1| putative diaminopimelate decarboxylase [Photobacterium profundum 3TCK] Length = 416 Score = 314 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 184/417 (44%), Positives = 256/417 (61%), Gaps = 4/417 (0%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y G L AE+++L +LA TP Y YS +E+++ F A ++CYA+ Sbjct: 1 MDYFNYQPNGQLWAEDIALTELAERYGTPLYVYSRATLERHWNAFDQAVTDHPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS+GEL R + A ++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNIGVLNVLARLGSGFDIVSQGELERVITAGGDPAKVVFSGVGKTAVEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LNQ A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNQVASELGVIAPISLRINPDVDAQTHPYISTGLRDNKFGIFFERAV 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A +LP + + G+D HIGSQ+ I+ F A L L L++ G I+H+DVGGG Sbjct: 181 EVYRLAHSLPNLNVVGMDCHIGSQLTNIDPFIDATDRLLALIDTLKAEGIVIKHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + + ++I EPGR + A+ G+L+T+V +K + K Sbjct: 241 LGVTYSEEQPPLPSEYATALLARLGEHSELELIFEPGRAIAANAGVLLTRVEFLKHTDYK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RPTLY A+ I +V G+ D+VGPICETGDFI +R++ Sbjct: 301 NFAIVDAAMNDLIRPTLYQAWQNIVPVVPRKGE--TKTYDLVGPICETGDFIGKDREL-C 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL + GAYG V S YN+R EIMV+G+ H++R R EL + + + Sbjct: 358 LAPGDLLAVRSAGAYGFVMSSNYNTRTRAAEIMVDGNTAHVVREREKLAELWQSEHL 414 >gi|84393560|ref|ZP_00992314.1| diaminopimelate decarboxylase [Vibrio splendidus 12B01] gi|84375839|gb|EAP92732.1| diaminopimelate decarboxylase [Vibrio splendidus 12B01] Length = 417 Score = 314 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 190/420 (45%), Positives = 262/420 (62%), Gaps = 5/420 (1%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L AE+V+L +LA TP Y YS +E+++ F ++ +VCYA+ Sbjct: 1 MDYFNYQEDGQLWAEDVALSQLAEQYGTPLYVYSRATLERHWNAFDSSVGEHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA +GSG DIVS GEL R +AA ++VFSGVGKT E+ AL+ I Sbjct: 61 KANSNLGVLNTLARMGSGFDIVSGGELERVVAAGGDPAKVVFSGVGKTAAEMKRALELNI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG KAPI+ R+NPD++ANTH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGELGVKAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++YA+A TL + I G+D HIGSQ+ IE F A L L QLR+N NI+H+DVGGG Sbjct: 181 AVYAFAKTLDNLSIHGIDCHIGSQLTDIEPFIDATDRLLALIDQLRANDINIKHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVVYRDELPPQPSDYAKALLARLDNHSDLELIFEPGRAIAANAGVLLTKVEFLKPTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + G+ + D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVSPRQGEA--VTYDLVGPICETGDFLGKDRDL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 GDLL + GAYG S YN+R E+MV+G + H++R R L EL+ +P Sbjct: 358 LEEGDLLAVRSAGAYGFAMSSNYNTRSRAAEVMVDGDKTHLVRQREELTSLWELENILPE 417 >gi|209967337|ref|YP_002300252.1| diaminopimelate decarboxylase [Rhodospirillum centenum SW] gi|209960803|gb|ACJ01440.1| diaminopimelate decarboxylase [Rhodospirillum centenum SW] Length = 436 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 202/422 (47%), Positives = 281/422 (66%), Gaps = 5/422 (1%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD-----GMDTMVCYA 58 F Y +G LH E+V L +A TP Y YST + N+ +++AFD G D VCYA Sbjct: 9 FAYRDGELHVEDVPLSAIAAEAGTPAYVYSTAELRANWRAYADAFDLDGPGGRDVAVCYA 68 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 LKANSN AVI+TL LG+G D+VS GE++RAL A +PA+RIVFSGVGKT DE+ AL++G Sbjct: 69 LKANSNLAVIRTLTALGAGADVVSVGEMQRALVAGIPADRIVFSGVGKTRDELAAALKAG 128 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ NVES EL L+ A LG AP+A RVNPD++A TH KI+TG+KEDKFGI Q Sbjct: 129 IHQINVESLPELDLLSAVASGLGLVAPVALRVNPDVDAQTHGKIATGRKEDKFGIDWSQA 188 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + +A A+ LPG++ GV +HIGSQ+ + F AF + +L LR++G I+ ID+GG Sbjct: 189 GAAFARAAALPGLRPLGVAIHIGSQLLKTSPFALAFAKVAELVTDLRAHGIGIERIDLGG 248 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 G+G+ Y + P YA ++ + G+L C I LEPGR LVA G+L+++V+ +K+ Sbjct: 249 GVGVPYREEDIGPDHRAYAQVVRETVGHLGCHITLEPGRSLVASAGVLLSRVVHVKEGLH 308 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + F++LD AMND +RP+LYDA+H I + PA D+VGP+CE+GD A R++ Sbjct: 309 RRFLVLDAAMNDLIRPSLYDAWHTILPVRQPARGAPLSAMDVVGPVCESGDTFAKGRRLP 368 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 + GDL+ I GAYGAV + TYNSR L+PE++V G + ++R R T +EL+ ++S+PA Sbjct: 369 PMQAGDLVAILTAGAYGAVMASTYNSRPLVPEVLVAGGERAVVRRRPTLEELLAMESVPA 428 Query: 419 WL 420 WL Sbjct: 429 WL 430 >gi|209883910|ref|YP_002287767.1| diaminopimelate decarboxylase [Oligotropha carboxidovorans OM5] gi|209872106|gb|ACI91902.1| diaminopimelate decarboxylase [Oligotropha carboxidovorans OM5] Length = 422 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 210/422 (49%), Positives = 291/422 (68%), Gaps = 2/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y G LHAE+V + +LA + TPFYCYST +E++Y F+ AF G+DT+VCYA+K Sbjct: 1 MHHFQYRNGVLHAEDVDIGRLAEQLGTPFYCYSTATLERHYRVFTEAFAGVDTLVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+V++TLA LG+G D+VS GEL RA AA +PA++IVFSGVGKT E+ AL I Sbjct: 61 ANSNQSVLRTLARLGAGADVVSGGELMRARAAGIPADKIVFSGVGKTEGELRQALAENIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 C NVESE EL L++ A G+ A ++ R+NPDI A H KISTGK E+KFGIP+ + Sbjct: 121 CINVESEPELDLLSRVADETGQVARVSLRLNPDIGAGGHAKISTGKSENKFGIPLSRARG 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG++++GVDMHIGSQI + AF LL D + LR++GH I HID GGGL Sbjct: 181 VYARAAKLPGIRLTGVDMHIGSQITDLAPLEAAFALLVDFVRTLRADGHAIDHIDFGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGN-LQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 PP+ + YA ++ + C+++ EPGR +V + GILV++VI +K Sbjct: 241 GIPYESDLPVPPTPAAYAEVVKRVTRGLDDCRLLFEPGRMIVGNAGILVSRVIYVKHGEG 300 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + FVI+D AMND +RPTLY+A+H+I + A + + AD+VGP+CETGD++AL R++ Sbjct: 301 RNFVIIDAAMNDLIRPTLYEAHHDILPVREAAPNDPSLVADVVGPVCETGDYLALGRRLP 360 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 GDL+ + +GAYGAVQ+GTYN+R L+PE++V G + ++RPR+ +LI LD I Sbjct: 361 ALAAGDLVAVMSSGAYGAVQAGTYNTRPLVPEVLVKGGDYAVVRPRVDAAQLIALDQIAP 420 Query: 419 WL 420 WL Sbjct: 421 WL 422 >gi|319404864|emb|CBI78465.1| Diaminopimelate decarboxylase [Bartonella rochalimae ATCC BAA-1498] Length = 424 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 224/423 (52%), Positives = 300/423 (70%), Gaps = 1/423 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y++G LHAE++SL LA V TPFYCYS + N+ + AF M ++ YA+K Sbjct: 1 MHFFSYYQGELHAEDLSLSILAQKVGTPFYCYSARTLITNFENYQQAFQDMPYLIAYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQA+++ LA G+G D+VSEGELRRALAA +PA RIV+SGVGKT+ EID AL I+ Sbjct: 61 ANSNQAILRLLARSGAGADVVSEGELRRALAAGIPAHRIVYSGVGKTMKEIDFALTQNIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+L A I+ R+NPD++A THKKI+TGK E+KFGIP+ Sbjct: 121 CFNVESEPELEQLSARAVALSTTARISLRINPDVDAKTHKKITTGKSENKFGIPLSSARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LPG+ I GVD+HIGSQI ++ F AF + D QL ++G+ I H+D+GGGL Sbjct: 181 VYKKAAQLPGLYICGVDIHIGSQICNLKPFEDAFLITADFICQLWNDGYTITHVDIGGGL 240 Query: 241 GIAYHSDHR-PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y S+H PS +YA+L+ ++ L IILEPGR +V + GILVT VI +K+ ++ Sbjct: 241 GIPYGSEHHSVPSPFEYAALVRKHIAPLGINIILEPGRSIVGEAGILVTSVIHLKRGKER 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMNDF+RPTLY+A+ + + D I+ADIVGP+CETGD++ LNR +AL Sbjct: 301 NFVIVDAAMNDFIRPTLYEAWQNVLLVKEKPIDTPLINADIVGPVCETGDYLGLNRSLAL 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDLL + GAYGAV S TYNSRLLIPE++V ++ +IRPR+ +++LI LD IP W Sbjct: 361 LSQGDLLVVTGAGAYGAVMSNTYNSRLLIPEVLVQDMRYAVIRPRLDYEQLIGLDQIPDW 420 Query: 420 LQK 422 ++ Sbjct: 421 IEN 423 >gi|288817402|ref|YP_003431749.1| diaminopimelate decarboxylase [Hydrogenobacter thermophilus TK-6] gi|288786801|dbj|BAI68548.1| diaminopimelate decarboxylase [Hydrogenobacter thermophilus TK-6] gi|308751009|gb|ADO44492.1| diaminopimelate decarboxylase [Hydrogenobacter thermophilus TK-6] Length = 415 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 179/412 (43%), Positives = 243/412 (58%), Gaps = 4/412 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 +Y +G LH E VSL+ LA TP Y YS + I + AF D ++CYA+KAN Sbjct: 8 YLEYIDGELHLEGVSLKALAEEFGTPLYVYSASHIRDRVRAYREAFP--DALICYAVKAN 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 N ++I+ G+G DIVS GEL +L A V RIV++GVGKT+ E++ A++S I F Sbjct: 66 FNPSIIRVAREEGAGADIVSGGELYASLLAGVEPSRIVYAGVGKTLKELEYAIKSDILMF 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A SLGKK IA RVNPD++ TH ISTG K+ KFG+ I Y Sbjct: 126 NVESRMELDVLNHLAESLGKKIRIAIRVNPDVDPKTHPYISTGMKKSKFGVDIKHAKQEY 185 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 YA L +++ G+ HIGSQI + + +A + + DL +L +G I+++D+GGGLGI Sbjct: 186 QYAGKLKNLEVVGIHCHIGSQILDVSPYIEAVEKVVDLYHELVRSGFEIRYVDIGGGLGI 245 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y D P D A + + KI+LEPGR +V + G+L+T+V +K K FV Sbjct: 246 KYKPDQSNPEPKDLAEAVMPALKGVDAKILLEPGRSIVGNAGLLITRVEFLKDKGHKHFV 305 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D MND +RP +YDAYH I +V D +I DIVGPICETGDF+AL+R+I Sbjct: 306 IVDAGMNDLIRPAMYDAYHHIVPVVKR--DTGYIKTDIVGPICETGDFLALDREIQKVER 363 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GD L + GAYG S YN R E++V + IIR R T+ + + + Sbjct: 364 GDYLAVLSAGAYGFAMSSHYNVRPRACEVLVEKQSYKIIRERETYAYIFKGE 415 >gi|260583176|ref|ZP_05850956.1| diaminopimelate decarboxylase [Haemophilus influenzae NT127] gi|260093794|gb|EEW77702.1| diaminopimelate decarboxylase [Haemophilus influenzae NT127] Length = 415 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 185/415 (44%), Positives = 264/415 (63%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKNNKLYAEDIPVQQLAEQFDTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ +++ Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIIEIDRTLA-REKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD + GAYGA S YNSR E++V+G Q ++IR R T QEL L+S Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRARTAEVLVDGDQSYLIRRRETLQELWALES 413 >gi|15606446|ref|NP_213826.1| diaminopimelate decarboxylase [Aquifex aeolicus VF5] gi|6225241|sp|O67262|DCDA_AQUAE RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|146386677|pdb|2P3E|A Chain A, Crystal Structure Of Aq1208 From Aquifex Aeolicus gi|146386678|pdb|2P3E|B Chain B, Crystal Structure Of Aq1208 From Aquifex Aeolicus gi|2983642|gb|AAC07209.1| diaminopimelate decarboxylase [Aquifex aeolicus VF5] Length = 420 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 178/410 (43%), Positives = 252/410 (61%), Gaps = 4/410 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 +Y +G L E VSL++LA TP Y YS+ I++ + + AF D ++CYA+KAN Sbjct: 10 YLEYRDGELFIEGVSLKELAQTFGTPLYVYSSNFIKERFEAYRKAFP--DALICYAVKAN 67 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 N ++K L LG+G DIVS GEL A A +P ERIV++GVGKT E+ A+ S I F Sbjct: 68 FNPHLVKLLGELGAGADIVSGGELYLAKKAGIPPERIVYAGVGKTEKELTDAVDSEILMF 127 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN+ A LGKKA IA RVNPD++ TH I+TG ++ KFG+ I + Y Sbjct: 128 NVESRQELDVLNEIAGKLGKKARIAIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEY 187 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 YAS L ++I G+ HIGSQI I + +A + + L + L G +I+++D+GGGLGI Sbjct: 188 EYASKLENLEIVGIHCHIGSQILDISPYREAVEKVVSLYESLTQKGFDIKYLDIGGGLGI 247 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + + P+ D A L+ N++ KIILEPGR ++ + GIL+T+V +K K F+ Sbjct: 248 KYKPEDKEPAPQDLADLLKDLLENVKAKIILEPGRSIMGNAGILITQVQFLKDKGSKHFI 307 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D MND +RP++Y+AYH I + +R + ADIVGPICETGDF+AL+R+I + Sbjct: 308 IVDAGMNDLIRPSIYNAYHHIIPVE--TKERKKVVADIVGPICETGDFLALDREIEEVQR 365 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 G+ L + GAYG S YN R E++V +IR R + ++E Sbjct: 366 GEYLAVLSAGAYGFAMSSHYNMRPRAAEVLVENGSVKLIRKRENYDYIVE 415 >gi|261867422|ref|YP_003255344.1| diaminopimelate decarboxylase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412754|gb|ACX82125.1| diaminopimelate decarboxylase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 416 Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 256/416 (61%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L EN+ +++LA TP Y YS A+E ++ F NAF +VC+A+K Sbjct: 1 MDFFQYQYDRLMVENLPVKQLAEEFGTPLYVYSKAALEHHWYAFENAFGNHPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N N A++ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ EI AL+ GI Sbjct: 61 SNPNIAILNIMARLGSGFDIVSQGELERVLAAGGEAHKVVFSGVAKSRREIARALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ESE+EL +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNIESEAELLRINQVAGDIGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVEQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+TLP ++I G+D HIGSQ+ +++ F A L L +QL+ + ++H+D+GGGL Sbjct: 181 VYKLATTLPNIEIVGMDCHIGSQLTELQPFLDAADRLIMLMEQLKQDSIQLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P + +L + + +II+EPGR + A+ GILVTKV +K + + Sbjct: 241 GVTYTDETPPHPTEYAKALWEKLSAFNELEIIVEPGRAITANAGILVTKVEYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY AY I I R D+VGPICET DF+ RK+A Sbjct: 301 FAIVDAGMNDMIRPALYQAYMNILEIDRTLA-REEKIYDVVGPICETSDFLGKQRKLA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L GAYGA S YNSR E+MV+G ++IR R EL L+S+ Sbjct: 359 AEGDYLAQRSAGAYGASMSSNYNSRPRTAEVMVDGDNAYLIRRREALNELWRLESL 414 >gi|167854915|ref|ZP_02477691.1| diaminopimelate decarboxylase [Haemophilus parasuis 29755] gi|167853982|gb|EDS25220.1| diaminopimelate decarboxylase [Haemophilus parasuis 29755] Length = 419 Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats. Identities = 189/416 (45%), Positives = 266/416 (63%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE+V++ + TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MDYFHYKNQQLFAEDVAITDIIAQHGTPAYIYSRATLERHWHAFDKAFGDHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNLALLNVIARLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSHREIARALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +N+ A LGK API+ RVNPD++A TH ISTG KE+KFG+ + + Sbjct: 121 CFNVESVSELKRINEVAGQLGKIAPISLRVNPDVDAKTHPYISTGLKENKFGVSVKEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y +A+TLP VKI+G+D HIGSQ+ +++ F A + L +QL+ +G + H+D+GGGL Sbjct: 181 VYRFATTLPHVKITGMDCHIGSQLTELQPFLDATDRVIVLMEQLKQDGIELHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P A+L+H+ +IILEPGR + A+ GILVTKV IK++ D+ Sbjct: 241 GVTYTDETPPHPMEYAAALLHKLRTYPNLEIILEPGRAITANAGILVTKVEYIKQNEDRR 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY VN + R D+VGPICET DF+ R++ Sbjct: 301 FAIVDTGMNDMIRPALYEAYM-QIIEVNQSLVREKAIYDVVGPICETSDFLGKQREL-TI 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + GAYGA S TYNSR E+MV+G + H+I+ R +F++L L++I Sbjct: 359 TEGDLIAMRSAGAYGATMSSTYNSRPQAIEVMVDGDKAHLIKARASFEDLWRLENI 414 >gi|297570155|ref|YP_003691499.1| diaminopimelate decarboxylase [Desulfurivibrio alkaliphilus AHT2] gi|296926070|gb|ADH86880.1| diaminopimelate decarboxylase [Desulfurivibrio alkaliphilus AHT2] Length = 430 Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats. Identities = 188/433 (43%), Positives = 275/433 (63%), Gaps = 13/433 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y +G L AE V + +A V TPFY YST +E+++ ++F + + C+A+K Sbjct: 1 MDHFQYRDGVLGAEEVPVPAIAEAVGTPFYLYSTATLERHFKALDDSFADLAHLTCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SN A+++ A LG G DIVS GEL RALAA + +IV+SGVGKT EI A+++GI Sbjct: 61 ACSNIAILRLFARLGGGADIVSGGELYRALAAGIDPGKIVYSGVGKTRAEIRQAIEAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN+ESE EL+ + Q A L A I+FRVNPD++ TH ISTG ++KFGIPI + + Sbjct: 121 MFNLESEQELEVVAQCATELQTTARISFRVNPDVDPQTHAYISTGLAKNKFGIPIAEAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A L GV+I GV HIGSQ+ ++ F L+ +L ++G ++++D+GGGL Sbjct: 181 VYRRARELAGVEIVGVSCHIGSQLTKVSPFVDTIDKLKKFLARLAADGIAVKYLDIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS-------- 292 GI Y+ PP + Y + + Q G L C +ILEPGR +V + GI+VT+V+ Sbjct: 241 GIKYN-QEEPPEPAAYGAAVRQALGELDCTLILEPGRVIVGNAGIMVTRVLYTKSGPKSS 299 Query: 293 --IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 + K F+++D MND RP+LYDAYH I +V GD AD+VGPICETGDF Sbjct: 300 PENSHNGQKKFIVVDAGMNDLFRPSLYDAYHAIVPVVQ--GDGATQTADVVGPICETGDF 357 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 +A ++++ RPG+LL ++ GAYG + YNSR + E++VNG++FH+IR R ++++L Sbjct: 358 LARDQEVPAARPGELLAVKSAGAYGFTMASNYNSRPRVAEVLVNGTEFHVIRRRESYEDL 417 Query: 411 IELDSIPAWLQKT 423 I + IPA+L ++ Sbjct: 418 IRGEEIPAFLNRS 430 >gi|90019887|ref|YP_525714.1| diaminopimelate decarboxylase [Saccharophagus degradans 2-40] gi|89949487|gb|ABD79502.1| diaminopimelate decarboxylase [Saccharophagus degradans 2-40] Length = 414 Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats. Identities = 188/416 (45%), Positives = 262/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F Y G L AE SL +A + TP Y YS A + Y ++NA MVCYA+K Sbjct: 1 MSDFHYQNGELFAEQCSLNAIADALGTPCYVYSKAAFTRAYQDYANALGNHPGMVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV++ LA LG+G DIVS GELRR L A RI+FSGVGKT +E+ AL+ GI Sbjct: 61 ANSNIAVLQVLAKLGAGFDIVSSGELRRVLKAGGQPNRIIFSGVGKTREEMREALEVGIA 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL+ L A LG A I+ RVNPD++A TH ISTG KE+KFGI I + + Sbjct: 121 CFNVESEAELERLADVAAELGVVASISLRVNPDVDAKTHPYISTGLKENKFGIDIQRAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA AS L +K+ GVD HIGSQ+ ++ F A L L L G I+H+D+GGGL Sbjct: 181 VYARASELASLKVVGVDCHIGSQLTELTPFLDALDRLLQLVDTLAETGITIEHLDIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP+ +DY + I G+ + II+EPGR + A+ G+++T+V +K + K Sbjct: 241 GVTYRDE-VPPAVADYLTQIKAKLGDRKLAIIMEPGRSIAANAGVMLTEVEFLKPTEHKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + + D+VGP+CETGDF+A +R +A Sbjct: 300 FAIIDGAMNDNIRPALYQAWQDVKPLSQR--EGETQQWDLVGPVCETGDFLAKDRALA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L + +GAYG V S YN+R E++V+G ++ ++R R +F++LI + + Sbjct: 357 QAGDRLALMSSGAYGFVMSSNYNTRGRAAEVLVDGDKYFVVRERESFEDLIRGEHL 412 >gi|254508819|ref|ZP_05120930.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus 16] gi|219548276|gb|EED25290.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus 16] Length = 417 Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats. Identities = 187/420 (44%), Positives = 259/420 (61%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AENV+L LA TP Y YS +E+++ F + +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAENVALSDLAQQYGTPLYVYSRATLERHWNAFDKSVGDHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA +GSG DIVS GEL R +AA A ++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNALARIGSGFDIVSGGELERVIAAGGDASKVVFSGVGKTEQEMQRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG KAPI+ R+NPD++ANTH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGQLGVKAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y +A++L + + G+D HIGSQ+ IE F A L L L+ G +I+H+DVGGG Sbjct: 181 AVYQFAASLENLDVKGIDCHIGSQLTDIEPFIDATDRLLALIDDLKEQGIDIKHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ GIL+TKV +K + K Sbjct: 241 LGVVYRDEMPPEPSDYAKALLSRLDNHKHLELIFEPGRAIAANAGILLTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + G+ D+VGPICETGDF+ +R++ + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVAPREGEATE--YDLVGPICETGDFLGKDRRL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 DLL + GAYG V S YN+R+ E+MV+G Q H++R R L L+ +P Sbjct: 358 LEENDLLAVRSAGAYGFVMSSNYNTRVRAAEVMVDGDQSHLVRQREELSSLWALENILPE 417 >gi|260774852|ref|ZP_05883754.1| diaminopimelate decarboxylase [Vibrio coralliilyticus ATCC BAA-450] gi|260609277|gb|EEX35432.1| diaminopimelate decarboxylase [Vibrio coralliilyticus ATCC BAA-450] Length = 417 Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats. Identities = 187/420 (44%), Positives = 258/420 (61%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE+V L LA TP Y YS E+++ F + +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAEDVPLTDLAEQFGTPLYVYSRATFERHWNAFDKSVGEHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R +AA A ++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSGGELERVIAAGGEASKVVFSGVGKTAPEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG KAPI+ R+NPD++ANTH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGELGVKAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y +A L + I G+D HIGSQ+ IE F A L L L++ G NI+H+DVGGG Sbjct: 181 AVYQFAQGLKNLTIKGIDCHIGSQLTDIEPFIDATDRLLALIDDLKAQGINIEHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVVYRDELPPEPSEYAKALLGRLENHQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + + + D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPV--NPREGEPVTYDLVGPICETGDFLGKDRAL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + DLL + GAYG V S YN+R + E+MV+G++ H++R R L L+ +P Sbjct: 358 LQENDLLAVRSAGAYGFVMSSNYNTRTRVAEVMVDGNKAHLVRQREELSSLWALENILPE 417 >gi|171910232|ref|ZP_02925702.1| diaminopimelate decarboxylase [Verrucomicrobium spinosum DSM 4136] Length = 433 Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats. Identities = 181/432 (41%), Positives = 257/432 (59%), Gaps = 18/432 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M +F+Y +G LH ENV LE L+ TP Y YS I +Y A D +D ++CYA+K Sbjct: 1 MHSFRYIQGRLHCENVDLESLSAKHGTPLYVYSKETITDHYKRLDGALDRLDHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN A+++T+A LG G DIVS GEL R + A A + F+GVGKT EI+ ALQ GIY Sbjct: 61 ANSNLAILQTIADLGGGFDIVSGGELYRVIQAGGRASQCTFAGVGKTRAEIEYALQQGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN ESE+EL+ +N+ A +LGKKAP+A RVNP+++A THK ISTGK E+KFG+ +I Sbjct: 121 SFNAESEAELRQINEVAGTLGKKAPVALRVNPNVDAKTHKYISTGKSENKFGVDFDRILD 180 Query: 181 -LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A A+ + I G+ MHIGSQ+ I+ F +A K + L ++L+ H+I+ +GGG Sbjct: 181 AYAAIATECEHLDIRGLQMHIGSQLTSIDPFVEAAKKVAPLVEKLK-ERHHIKFFSIGGG 239 Query: 240 ---------------LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVG 284 RP + YA + L+ +I+LEPGRF+V + G Sbjct: 240 LGIVYRESLDSGDQTWWGEKEEAERPLTIQSYADALVPILEPLKLRILLEPGRFMVGNAG 299 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 L++KV+ +KK K FVI+D MND +RP LY+ ++ A D+VGPI Sbjct: 300 ALLSKVLYLKKGNAKKFVIVDAGMNDLIRPALYE-GWHQITPLHKAEGAELEKVDVVGPI 358 Query: 345 CETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPR 404 CETGDF+A +R++ + GD L + GAYG + YNSR L EI+V+G++ H++R R Sbjct: 359 CETGDFLAQDRELPPVQAGDTLAVLSAGAYGFTMASNYNSRPLAAEILVDGAEAHLVRER 418 Query: 405 MTFQELIELDSI 416 T +L+ + + Sbjct: 419 QTLDDLVRGEHL 430 >gi|293390767|ref|ZP_06635101.1| diaminopimelate decarboxylase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951301|gb|EFE01420.1| diaminopimelate decarboxylase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 416 Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 258/416 (62%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L EN+ +++LA TP Y YS A+E+++ F NAF +VC+A+K Sbjct: 1 MDFFQYQYDRLMVENLPVKQLAEEFGTPLYVYSKAALERHWYAFENAFGNHPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N N A++ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ EI AL+ GI Sbjct: 61 SNPNIAILNIMARLGSGFDIVSQGELERVLAAGGEAHKVVFSGVAKSRREIARALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNVESEAELLRINQVAGDIGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVEQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+TLP ++I G+D HIGSQ+ +++ F A L L +QL+ + ++H+D+GGGL Sbjct: 181 VYKLATTLPNIEIVGMDCHIGSQLTELQPFLDAADRLIMLMEQLKQDSIQLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P + +L + + +II+EPGR + A+ GILVTKV +K + + Sbjct: 241 GVTYTDETPPHPTEYAKALWEKLSAFNELEIIVEPGRAITANAGILVTKVEYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY AY I I R D+VGPICET DF+ RK+A Sbjct: 301 FAIVDAGMNDMIRPALYQAYMNILEIDRTLA-REEKIYDVVGPICETSDFLGKQRKLA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L GAYGA S YNSR E+MV+G ++IR R EL +L+S+ Sbjct: 359 AEGDYLAQRSAGAYGASMSSNYNSRPRTAEVMVDGDNAYLIRRREALNELWQLESL 414 >gi|212633301|ref|YP_002309826.1| diaminopimelate decarboxylase [Shewanella piezotolerans WP3] gi|212554785|gb|ACJ27239.1| Diaminopimelate decarboxylase [Shewanella piezotolerans WP3] Length = 414 Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats. Identities = 179/416 (43%), Positives = 261/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L+AE + +LA TP Y YS +E+++ F NA ++CYA+K Sbjct: 1 MDHFIYQAEELYAEQCQVAELAKQHGTPLYIYSRATLERHWYAFDNAVANHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT+ E++LAL+ GIY Sbjct: 61 ANSNIAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMELALEIGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ L+ A + K AP++ R+NPD++A TH ISTG KE+KFGI + + + Sbjct: 121 CFNVESAAELEQLSVVAQRMNKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++ A LP ++I GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 IFLRAKELPCIEIKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLAELGIEIKHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP YA+ + + G K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTYDDE-LPPQPDVYAAALLERLGGRDLKLIFEPGRAIAANAGIFVTQVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP+LY A+ +I ++ G+ ++ D+VGP+CETGDF+ +R++ Sbjct: 300 FALVDGAMNDLIRPSLYSAWQKIIPAIDRGGE--TLNYDVVGPVCETGDFLGKDRQLN-I 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L I +GAYG + YNSR E+MV+G ++IR R +L + + + Sbjct: 357 AAGDYLAIRSSGAYGFTMASNYNSRPRAAELMVDGDNAYVIREREKLAQLWQGEQL 412 >gi|68249326|ref|YP_248438.1| diaminopimelate decarboxylase [Haemophilus influenzae 86-028NP] gi|68057525|gb|AAX87778.1| diaminopimelate decarboxylase [Haemophilus influenzae 86-028NP] Length = 415 Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats. Identities = 185/415 (44%), Positives = 265/415 (63%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKHNKLYAEDMPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ +++ Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I +R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIVEIDRTL-EREKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD + GAYGA S YNSR E++V+G Q ++IR R T QEL L+S Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRARTAEVLVDGDQSYLIRRRETLQELWALES 413 >gi|323495294|ref|ZP_08100375.1| diaminopimelate decarboxylase [Vibrio brasiliensis LMG 20546] gi|323310471|gb|EGA63654.1| diaminopimelate decarboxylase [Vibrio brasiliensis LMG 20546] Length = 417 Score = 312 bits (800), Expect = 6e-83, Method: Composition-based stats. Identities = 186/420 (44%), Positives = 258/420 (61%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE+V+L +LA TP Y YS +E+++ F + +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAEDVALTELAQQFGTPLYVYSRATLERHWHAFDKSVGEHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS GEL R +AA ++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGEPSKVVFSGVGKTEAEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LGKKAPI+ R+NPD++ANTH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGELGKKAPISLRINPDVDANTHPYISTGLRDNKFGIAFERAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y +A +L + + G+D HIGSQ+ IE F A L L L+S G I+H+DVGGG Sbjct: 181 AVYKFAQSLEHLDVRGIDCHIGSQLTDIEPFIDATDRLLALIDDLKSQGVTIEHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVVYRDELPPEPSDYAKALLGRLENHQDLELIFEPGRAIAANAGVLLTKVEFLKPTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + + + D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPV--CPREGEPVTYDLVGPICETGDFLGKDRAL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 DLL + GAYG V S YN+R E+MV+G+Q H++R R L L+ +P Sbjct: 358 IEENDLLAVRSAGAYGFVMSSNYNTRSRAAEVMVDGNQAHLVRQREELSSLWALENVLPE 417 >gi|319897770|ref|YP_004135967.1| diaminopimelate decarboxylase, plp-binding [Haemophilus influenzae F3031] gi|317433276|emb|CBY81651.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus influenzae F3031] Length = 415 Score = 312 bits (800), Expect = 6e-83, Method: Composition-based stats. Identities = 184/414 (44%), Positives = 263/414 (63%), Gaps = 2/414 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKHNKLYAEDIPIQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ +++ Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARK 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYNLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKDYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIVEIDRTLA-REKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GD + GAYGA S YNSR E++V+G Q ++IR R T QEL L+ Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRARTAEVLVDGDQSYLIRRRETLQELWALE 412 >gi|54310576|ref|YP_131596.1| putative diaminopimelate decarboxylase [Photobacterium profundum SS9] gi|46915019|emb|CAG21794.1| putative diaminopimelate decarboxylase [Photobacterium profundum SS9] Length = 416 Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 184/417 (44%), Positives = 257/417 (61%), Gaps = 4/417 (0%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y G L AE+++L +LA TP Y YS +E+++ F A ++CYA+ Sbjct: 1 MDYFNYQPNGQLWAEDIALTELAERYGTPLYVYSRATLERHWNAFDQAVIDHPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS+GEL R + A ++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNIGVLNVLARLGSGFDIVSQGELERVITAGGDPAKVVFSGVGKTAVEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LNQ A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNQVASELGLVAPISLRINPDVDAQTHPYISTGLRDNKFGIFFERAV 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A +LP + + G+D HIGSQ+ I+ F A L L L++ G I+H+DVGGG Sbjct: 181 EVYRLAHSLPNLNVVGMDCHIGSQLTNIDPFIDATDRLLALIDTLKAEGIVIKHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y+ + P S ++L+ + + ++I EPGR + A+ G+L+T+V +K + K Sbjct: 241 LGVTYNEEQPPLPSEYASALLARLGEHSDLELIFEPGRAIAANAGVLLTRVEFLKHTDYK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RPTLY A+ I +V G+ D+VGPICETGDFI +R++ Sbjct: 301 NFAIVDAAMNDLIRPTLYQAWQNIVPVVPREGEA--KTYDLVGPICETGDFIGKDREL-C 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL + GAYG V S YN+R EIMV+G+ H++R R EL + + + Sbjct: 358 LAPGDLLAVRSAGAYGFVMSSNYNTRTRAAEIMVDGNTAHVVREREKLAELWQSEHL 414 >gi|23015819|ref|ZP_00055585.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 424 Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 206/422 (48%), Positives = 286/422 (67%), Gaps = 3/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ F Y G+L AE+V++ ++A V TPFYCYST +E++Y F+ A G+D +C+A Sbjct: 1 MNHFHYSNGTLFAEDVAIARIAREVGTPFYCYSTATLERHYTVFAEALKSAGLDATICFA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KAN N AVI+T A LG+G D+VSEGELR+ALAA VPA RIVFSGVGKT E++ A+ G Sbjct: 61 AKANPNMAVIRTFAQLGAGADVVSEGELRQALAAGVPAARIVFSGVGKTRHELEFAVAKG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ NVESE EL+ L++ A + G PIA RVNPD++A TH KI+TGKKE+KFGI + Sbjct: 121 IFQINVESEPELEMLSEVAAARGLVMPIAIRVNPDVDAGTHAKITTGKKENKFGIEWTRA 180 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 +YA A LPGV+ + HIGSQ+ +++ F +AF +RDL LR++G +I+ +D+GG Sbjct: 181 REVYARAKALPGVEPVSIACHIGSQLTELDPFREAFLRVRDLVAMLRADGIDIRRLDLGG 240 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 GLG+ Y + P YA +I G+L C+ I EPGR LV + GILV+ +I +K+ + Sbjct: 241 GLGVPYDDETP-PEPKAYAEVIKASLGDLGCRFIFEPGRLLVGNAGILVSSIIRVKEGST 299 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 +TF+I+D AMND RP+LYDAYH I + P D+VGP+CETGD A R++ Sbjct: 300 RTFLIVDAAMNDLARPSLYDAYHSIFPVAEPKAGAPLAEVDVVGPVCETGDTFARQRRLP 359 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 R GDLL + GAYGA S TYN+R LIPE++V G+ + +IR R +++++ L+S+P Sbjct: 360 PMRAGDLLALGTAGAYGAAMSSTYNTRPLIPEVLVKGADYAVIRARPSYEDMRSLESLPG 419 Query: 419 WL 420 WL Sbjct: 420 WL 421 >gi|258622843|ref|ZP_05717860.1| diaminopimelate decarboxylase [Vibrio mimicus VM573] gi|258584904|gb|EEW09636.1| diaminopimelate decarboxylase [Vibrio mimicus VM573] Length = 439 Score = 312 bits (799), Expect = 7e-83, Method: Composition-based stats. Identities = 181/419 (43%), Positives = 252/419 (60%), Gaps = 5/419 (1%) Query: 2 SAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 F Y + G L AE V L LA+ TP Y YS +E+++ F + ++CYA+K Sbjct: 24 DYFNYQDDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVK 83 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ TLA LGSG DIVS GEL R LAA ++VFSGVGKT E+ ALQ I Sbjct: 84 ANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIK 143 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL LN+ A LG KAPI+ R+NPD++A TH ISTG +++KFGI + Sbjct: 144 CFNVESERELHRLNKVAAELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAE 203 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A +L + + G+D HIGSQ+ + F A L L L++ G +I+H+DVGGGL Sbjct: 204 VYRLAHSLSHLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGL 263 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + ++I EPGR + A+ G+LVTKV +K + K Sbjct: 264 GVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKN 323 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ +I + G+ D+VGP+CET DF+ +R + + Sbjct: 324 FAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEA--QTYDLVGPVCETSDFLGKDRDL-VL 380 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 GDLL + +GAYG S YNSR + E+MV+G++ H++R R T L L+ +P Sbjct: 381 EEGDLLAVRSSGAYGFTMSSNYNSRPRVAEVMVDGNKAHLVRQRETLSSLWALESVLPE 439 >gi|323500161|ref|ZP_08105106.1| diaminopimelate decarboxylase [Vibrio sinaloensis DSM 21326] gi|323314790|gb|EGA67856.1| diaminopimelate decarboxylase [Vibrio sinaloensis DSM 21326] Length = 417 Score = 312 bits (799), Expect = 7e-83, Method: Composition-based stats. Identities = 189/420 (45%), Positives = 260/420 (61%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AENV+L LA TP Y YS +E+++ F + +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAENVALSDLAQQYGTPLYVYSRATLERHWNAFDKSVGEHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS GEL R +AA A+++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGDAKKVVFSGVGKTEQEMQRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG KAPI+ R+NPD++ANTH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGQLGVKAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y +AS+L + I G+D HIGSQ+ IE F A L L L++ G I+H+DVGGG Sbjct: 181 AVYQFASSLENLDIKGIDCHIGSQLTDIEPFIDATDRLLALIDDLKAQGIQIEHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVVYRDELPPQPSDYAKALLGRLANHQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + GD D+VGPICETGDF+ +R++ + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVSPRQGDA--KVYDLVGPICETGDFLGKDREL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 DLL + GAYG V S YN+R + E+MV+G + H++R R L L+ +P Sbjct: 358 IEENDLLAVRSAGAYGFVMSSNYNTRTRVAEVMVDGEKAHLVRQREELSSLWALENILPE 417 >gi|251793705|ref|YP_003008435.1| diaminopimelate decarboxylase [Aggregatibacter aphrophilus NJ8700] gi|247535102|gb|ACS98348.1| diaminopimelate decarboxylase [Aggregatibacter aphrophilus NJ8700] Length = 416 Score = 312 bits (799), Expect = 7e-83, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 256/416 (61%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L AEN+ +++LA TP Y YS +E+++ F AF +VCYA+K Sbjct: 1 MDFFQYQHHQLMAENLPVKQLAEQFGTPLYIYSKATLERHWYAFDKAFGEHPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N N A++ +A LGSG DIVS+GEL R L A ++VFSGV K+ EI AL+ GI Sbjct: 61 SNPNIAILNVMAKLGSGFDIVSQGELERVLVAGGNPAKVVFSGVAKSEPEITRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNVESEAELLRINEVARRLGKTAPISLRVNPDVDAHTHPYISTGLKENKFGVSVEQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+TLP ++I G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLAATLPNIEIVGMDCHIGSQLTELQPFLDAVDRLIVLMEQLKQDGIALKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P + +L + + +II+EPGR + A+ GILVTKV +K + + Sbjct: 241 GVTYTDETPPHPTEYAKALWEKLNAFSELEIIVEPGRAITANAGILVTKVEYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY AY I I R D+VGPICET DF+ RK+A Sbjct: 301 FAIVDAGMNDMIRPALYQAYMNILEIDRTLA-REEKIYDVVGPICETSDFLGKQRKLA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L GAYGA S YNS E+MV+G + ++IR R EL +L+S+ Sbjct: 359 AQGDYLAQRSAGAYGASMSSNYNSHPRTAEVMVDGDKAYLIRRREVLNELWQLESL 414 >gi|90416170|ref|ZP_01224102.1| diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2207] gi|90331895|gb|EAS47109.1| diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2207] Length = 421 Score = 312 bits (799), Expect = 7e-83, Method: Composition-based stats. Identities = 182/417 (43%), Positives = 258/417 (61%), Gaps = 5/417 (1%) Query: 1 MSA-FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M +G+L E+ +L +A + TP Y YS AI N+L + +A + ++CYA+ Sbjct: 3 MHHAISSQDGNLFIESTALSTIAGQLGTPCYVYSKAAISNNFLAYQSALVDKEHLICYAV 62 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AV++TLA LG+G DIVS GEL R L A ++VFSGV KT E+ AL+ GI Sbjct: 63 KANSNIAVLQTLAELGAGFDIVSIGELERVLRAGGDPAKVVFSGVAKTASEMQRALELGI 122 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 +CFNVESE+EL+ LN A S G A ++ RVNPD++A TH ISTG KE+KFGI I+ Sbjct: 123 HCFNVESEAELELLNSTASSCGATAAVSLRVNPDVDAQTHPYISTGLKENKFGIDINLAA 182 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A+ + + + GVD HIGSQ+ I F A + L L +L G ++HID+GGG Sbjct: 183 QVYQRAAQMAHINVVGVDCHIGSQLVDIAPFVSALERLLALVDELAGLGIALKHIDIGGG 242 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + PP+ Y S I + ++LEPGR + A+ G+++T+V +K + +K Sbjct: 243 LGVRYDDE-EPPTPQSYMSAILPLLMDRSETLVLEPGRSITANAGVMLTQVQYLKSNGEK 301 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RP LY A+ +I I G+ D+VGP+CETGDF+A +R ++ Sbjct: 302 NFAIVDAAMNDMIRPALYQAWMDIQSIS--TGNSESAVYDVVGPVCETGDFLAKDRPLS- 358 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L + GAYG V S YNSR PE+MV+G Q H++R R T ++L+ +S+ Sbjct: 359 ICAGDYLCLMSAGAYGFVMSSNYNSRPRAPEVMVDGDQIHLVRQRETIEDLLSGESL 415 >gi|292493805|ref|YP_003529244.1| diaminopimelate decarboxylase [Nitrosococcus halophilus Nc4] gi|291582400|gb|ADE16857.1| diaminopimelate decarboxylase [Nitrosococcus halophilus Nc4] Length = 416 Score = 312 bits (798), Expect = 8e-83, Method: Composition-based stats. Identities = 190/419 (45%), Positives = 254/419 (60%), Gaps = 4/419 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +L AE V L ++A TP Y YS IE + F AF +CYA+K Sbjct: 1 MDHFHYHDNTLWAEEVPLPEIASRFGTPCYVYSRAMIEHQWRAFDQAFQDYPHRLCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R LAA ++VFSGVGK DE+ AL +GI Sbjct: 61 ANSNLAVLNILARLGSGFDIVSVGELERVLAAGGDPGQVVFSGVGKRADEMHRALTAGIA 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL LN A LG++AP++ RVNPD++A TH I+TG +E+KFGI I Q Sbjct: 121 CFNVESEAELAHLNDIAGKLGRQAPVSLRVNPDVDARTHPYIATGLRENKFGIEIDQALE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A TLP + I GVD HIGSQ+ + F A + + L QL G ++HID+GGGL Sbjct: 181 VYAHAVTLPYIDILGVDCHIGSQLTSLSPFLAASERVLALVDQLAERGIEVRHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PPS YA+ + + ++ +EPGR +V + G+L+T+V +K + K Sbjct: 241 GITYRDE-APPSPQQYATALREKLVGRNLEVWIEPGRAIVGNGGVLLTRVEYLKHTPHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LYDA+ E V + D D+VGP+CETGDF+ R +A Sbjct: 300 FAIVDAAMNDLLRPALYDAWQE-IIPVTISTDGKSHLFDVVGPVCETGDFLGKQRHLA-I 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 G+LL GAYG S YNSR E+MV+GS+ +++R R T + L + +P Sbjct: 358 GVGELLVARAAGAYGFTMSSNYNSRPRAAEVMVDGSKAYLVRERETVESLYAGESILPE 416 >gi|298528736|ref|ZP_07016140.1| diaminopimelate decarboxylase [Desulfonatronospira thiodismutans ASO3-1] gi|298512388|gb|EFI36290.1| diaminopimelate decarboxylase [Desulfonatronospira thiodismutans ASO3-1] Length = 415 Score = 312 bits (798), Expect = 9e-83, Method: Composition-based stats. Identities = 170/414 (41%), Positives = 255/414 (61%), Gaps = 3/414 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G L+AE++S+++L TP Y YS + ++Y F +AF+G M C+++K Sbjct: 1 MNFFEYRNGELYAEDISIKELVQEFDTPLYVYSAKTLRRHYEAFDSAFEGTRHMTCFSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+K L +G+G+DIVS GEL RAL A + ++IV+SGVGK EI AL S I Sbjct: 61 ANSNICVLKLLGQMGAGVDIVSGGELFRALKAGIDPQKIVYSGVGKREHEIREALLSNIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ +NQ A + +A I+ R+NPD++ TH ISTG K++KFG+ + Q Sbjct: 121 MFNVESRQELERINQVASEMEVQARISLRINPDVDPQTHPYISTGLKKNKFGLELEQAWE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A L ++ G+D HIGSQ+ +E F +A + ++ +L+ G +I+++D+GGGL Sbjct: 181 SYKLARELSNIEPVGIDCHIGSQLTSVEPFLEALERIKSFYGRLQELGLDIKYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y PP +++ + + + +ILEPGR + + GI+VT+V+ K + K Sbjct: 241 GITY-DQEEPPHPAEFGRAVKESLKDTDLTLILEPGRVIAGNAGIMVTRVLYTKGTPSKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D AMND MRP+LY +YH I + +G AD+VGPICETGDF+A R++ Sbjct: 300 FVIVDAAMNDLMRPSLYGSYHRIEPVQEKSG--RLYTADVVGPICETGDFLAQGRELPRL 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 DLL + GAYG + YNSR E++V+ Q + R R + +L++L+ Sbjct: 358 EQDDLLAVHSAGAYGFTMASQYNSRPRPAEVLVDNDQAVLARRREVYFDLLQLE 411 >gi|322421972|ref|YP_004201195.1| diaminopimelate decarboxylase [Geobacter sp. M18] gi|320128359|gb|ADW15919.1| diaminopimelate decarboxylase [Geobacter sp. M18] Length = 417 Score = 312 bits (798), Expect = 9e-83, Method: Composition-based stats. Identities = 182/420 (43%), Positives = 261/420 (62%), Gaps = 3/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L AE V+++ + +P Y YS +E+++ +AF G +CY++K Sbjct: 1 MHHFQYKGDELFAEEVAIKDIVAKTGSPVYIYSKATLERHFKAMDDAFAGAPHTICYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+KT +LGSG+DIVS GEL RALAA V +++V+SGVGK DEI AL++GI Sbjct: 61 ANSNLAVLKTFINLGSGVDIVSGGELYRALAAGVDPKKVVYSGVGKRDDEIAYALETGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE EL +N+ A L KKA IA RVNPD++ TH I+TG K+ KFGI I + Sbjct: 121 LFNVESEQELDRINEVAGRLNKKAGIAIRVNPDVDPQTHPYITTGLKKAKFGINIERALG 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A L ++I G+D HIGSQ+ ++ F A K L+ L + +R G ++++D+GGGL Sbjct: 181 QYQRAKELSNLEILGIDCHIGSQLTKVSPFVDAIKKLKRLLKGVREMGIEVKYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ + PP +DY S I + +L ++ EPGR LV + GILV + KK +K Sbjct: 241 GIQYNDE-APPLPADYGSSILEETKDLGLHLLFEPGRNLVGNAGILVGTCLYTKKGEEKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D MND RP LY ++H + + + DIVGPICE+GDF+ +R+I Sbjct: 300 FVIVDAGMNDLARPALYGSFHGVRPVFRNQDGVIEG--DIVGPICESGDFLVKDREIPNF 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 + GD + GAYG S YNSR + E+MV+G +F ++R R T ++L++ + IP++L Sbjct: 358 QQGDQIAFMSAGAYGFTMSSNYNSRPRVAEVMVDGVKFEVVRERETLEDLVKGERIPSFL 417 >gi|145630464|ref|ZP_01786244.1| diaminopimelate decarboxylase [Haemophilus influenzae R3021] gi|144983854|gb|EDJ91296.1| diaminopimelate decarboxylase [Haemophilus influenzae R3021] Length = 415 Score = 312 bits (798), Expect = 9e-83, Method: Composition-based stats. Identities = 183/415 (44%), Positives = 264/415 (63%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKNNKLYAEDIPVQQLAEQFDTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ +++ Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I +R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIVEIDRTL-EREKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD + GAYGA S YNSR E++V+ + ++IR R T QEL L+S Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRARTAEVLVDRDKSYLIRRRETLQELWALES 413 >gi|153003227|ref|YP_001377552.1| diaminopimelate decarboxylase [Anaeromyxobacter sp. Fw109-5] gi|152026800|gb|ABS24568.1| diaminopimelate decarboxylase [Anaeromyxobacter sp. Fw109-5] Length = 422 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 179/430 (41%), Positives = 258/430 (60%), Gaps = 9/430 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+ +G LHAE + LE+LA TP Y YST + +++ + G+ +VCYA+K Sbjct: 1 MNHFQRKKGVLHAEAIPLERLAERYGTPLYVYSTATLTRHWKVLHRSLAGIRHVVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N A++ A LGSG DIVS GEL R L A ++VFSGVGK DEI AL+SG+ Sbjct: 61 ANANLALLARFAKLGSGFDIVSAGELYRVLKAGGDPRKVVFSGVGKRDDEIAFALESGVR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 NVES EL ++ A +G +APIA RVNPD++ TH ISTG +E+KFG+ + + Sbjct: 121 VLNVESAGELARISIVARRMGVRAPIALRVNPDVDPKTHPYISTGLRENKFGVSVDEARR 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY A+ + + G+ HIGSQI ++ F A + L ++L G + H+DVGGGL Sbjct: 181 LYPLAAKDEALHVMGIASHIGSQITTVKPFLDAIDRVLSLARELEKQGIPLAHLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + P +Y + I + + +++LEPGR LV + G+LVT+V+ +K+S KT Sbjct: 241 GIRYKDEDP-PHPDEYGAAIRKALARWKGEVLLEPGRVLVGNAGVLVTRVLHVKRSGRKT 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV++D AMND +RP +YDA+H+I + P + AD+VGPICE+ DF+A R++ P Sbjct: 300 FVVVDAAMNDLVRPAIYDAHHDIEPVGPPREGEREVVADVVGPICESSDFLARKRRMPEP 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 PGDLL + GAYG S YN+R E++V+G Q + R R T+ +L+ + Sbjct: 360 VPGDLLAVRSAGAYGFSMSSNYNARPRAAEVLVDGDQALLARRRETYADLVRGE------ 413 Query: 421 QKTPKQSSEN 430 P S E Sbjct: 414 --EPSPSPER 421 >gi|261250031|ref|ZP_05942608.1| diaminopimelate decarboxylase [Vibrio orientalis CIP 102891] gi|260939535|gb|EEX95520.1| diaminopimelate decarboxylase [Vibrio orientalis CIP 102891] Length = 417 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 187/420 (44%), Positives = 259/420 (61%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE+VSL +LA TP Y YS +E+++ F + +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAEDVSLTELAQQFGTPLYVYSRATLERHWNAFDKSVGEHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS GEL R +AA A ++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGDAAKVVFSGVGKTEAEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG KAPI+ R+NPD++ANTH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGELGVKAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y +A +L + + G+D HIGSQ+ IE F A L L L++ G I+H+DVGGG Sbjct: 181 AVYKFAQSLDNLDVRGIDCHIGSQLTDIEPFIDATDRLLALIDDLKAQGVTIEHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVVYRDELPPQPSEYAKALLGRLENHQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I ++ G+ + D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVIPREGEA--VAYDLVGPICETGDFLGKDRAL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 DLL + GAYG V S YN+R E+MV+G Q H++R R L L+ +P Sbjct: 358 LEENDLLAVRSAGAYGFVMSSNYNTRSRAAEVMVDGKQAHLVRQREELSSLWALENVLPE 417 >gi|262404862|ref|ZP_06081416.1| diaminopimelate decarboxylase [Vibrio sp. RC586] gi|262348946|gb|EEY98085.1| diaminopimelate decarboxylase [Vibrio sp. RC586] Length = 417 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 181/420 (43%), Positives = 251/420 (59%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE V L L + TP Y YS +E+++ F + ++CYA+ Sbjct: 1 MDYFNYQDDGQLWAEQVPLADLVNQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R LAA ++VFSGVGKT E+ ALQ I Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL LN+ A LG KAPI+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELHRLNKVAAELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A +L + + G+D HIGSQ+ + F A L L L++ G +I+H+DVGGG Sbjct: 181 EVYRLAHSLQNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKTEGIHIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+LVTKV +K + K Sbjct: 241 LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RP LY A+ +I + G+ D+VGP+CET DF+ +R + + Sbjct: 301 NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEA--QTYDLVGPVCETSDFLGKDRDL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 GDLL + +GAYG S YNSR + E+MV+G + H++R R T L L+ +P Sbjct: 358 LEEGDLLAVRSSGAYGFTMSSNYNSRPRVAEVMVDGIKAHLVRQRETLSSLWALESVLPE 417 >gi|189219090|ref|YP_001939731.1| diaminopimelate decarboxylase [Methylacidiphilum infernorum V4] gi|189185948|gb|ACD83133.1| Diaminopimelate decarboxylase [Methylacidiphilum infernorum V4] Length = 428 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 164/425 (38%), Positives = 233/425 (54%), Gaps = 12/425 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + L+ E+V L L TP Y YS I +Y F + +D +CYA+K Sbjct: 1 MHHFYYKDSELYVEDVPLRNLVERYGTPLYVYSAQTIIDHYKRFDRSLRDIDHFICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ ++K L LGSG D+VS GEL R L A ++ F+GVGKT EI+ ALQ+GIY Sbjct: 61 ANSNQRILKLLVDLGSGFDLVSGGELYRVLRAGADPQKCTFAGVGKTQSEIEEALQAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F VESE EL +++ A KAP+AFR+NPD++A TH KI+TG +KFGI + I Sbjct: 121 SFIVESEEELLEIDKIAAKRSTKAPVAFRLNPDVSALTHAKITTGTDLNKFGISLDLIDD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG-- 238 ++ S L + GV MHIGSQI I+ F +A + + ++ + GG Sbjct: 181 VFEKCSRLENIHCRGVQMHIGSQIQSIDPFLEAIQKVIPWVEKAKKKYGAEFFDIGGGIG 240 Query: 239 ---------GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 G + + + + YA I L KI++EPGR LV + GILV++ Sbjct: 241 IVYEKAMESGTEAWWQERNELLTLNRYAEQIVPLVKPLGMKILVEPGRVLVGNAGILVSR 300 Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 VI +KK K FVI+D AMND +RP Y+ + + D+VGP+CE+ D Sbjct: 301 VIYVKKGIAKKFVIIDAAMNDLVRPAFYE-AYHQIVPLKETAHGPLEVVDVVGPVCESSD 359 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 A++R + R GD L + GAYG + YNSRL E++V G+Q ++R R ++Q+ Sbjct: 360 CFAIDRLLPEVRAGDYLALLSAGAYGFSMASNYNSRLKPAEVLVWGNQVQLVRKRESYQD 419 Query: 410 LIELD 414 L+ L+ Sbjct: 420 LVALE 424 >gi|78486188|ref|YP_392113.1| diaminopimelate decarboxylase [Thiomicrospira crunogena XCL-2] gi|78364474|gb|ABB42439.1| diaminopimelate decarboxylase [Thiomicrospira crunogena XCL-2] Length = 418 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 182/419 (43%), Positives = 246/419 (58%), Gaps = 6/419 (1%) Query: 1 MSA---FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY 57 MS F Y LHAE L+ LA TP Y YS A E + F AF +VCY Sbjct: 1 MSQSQPFHYQNNILHAEGCPLDTLAQKYGTPLYVYSRQAFEDRWREFDQAFGRQPHLVCY 60 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+K NSN A++ LA LGSG DIVS+GEL R L A ++VFSGV K EI+ AL Sbjct: 61 AVKTNSNIAILNLLARLGSGFDIVSQGELERVLRAGGDPSKVVFSGVAKKSSEIERALTV 120 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 GI CFNVES +EL + A L K API+ RVNPD++A TH ISTG K++KFG+ I+ Sbjct: 121 GIRCFNVESHAELDRIQAVAKKLNKIAPISIRVNPDVDAKTHPYISTGLKDNKFGVDINT 180 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 +LYA A L + I G+D HIGSQ+ +I F A + +L + L G NI H+D+G Sbjct: 181 APALYADAQALSHIDIIGIDCHIGSQLTEITPFVDALDRVLELKKTLTDQGINIHHLDLG 240 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GGLGI Y + PP +DY + + + ++I+EPGR + + G+LVT+V +K + Sbjct: 241 GGLGIQYTDE-TPPEIADYIQALMKKLDDPSIEVIIEPGRAIAGNAGVLVTEVEYLKPTE 299 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 K F I+D AMND +RP LY ++ V P D + D+VGP+CETGDF+ RK+ Sbjct: 300 HKNFAIIDAAMNDLIRPALYQSHQ-TIQPVTPRTDGEDVEWDLVGPVCETGDFLGKQRKL 358 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L + +GAYG S YN+R EI+V+ Q + IRPR T+ +L+ + + Sbjct: 359 N-LKAGDYLAVMSSGAYGFTMSSNYNTRTRAAEILVDHKQAYEIRPRETYNDLMGKEKL 416 >gi|237809856|ref|YP_002894296.1| diaminopimelate decarboxylase [Tolumonas auensis DSM 9187] gi|237502117|gb|ACQ94710.1| diaminopimelate decarboxylase [Tolumonas auensis DSM 9187] Length = 416 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 189/417 (45%), Positives = 262/417 (62%), Gaps = 4/417 (0%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L AE ++ +L TP Y YS IE+++ F A + ++CYA+ Sbjct: 1 MDFFNYREDGELLAEQCAVSELVAQYGTPLYIYSRATIERHWKAFDAAAGDVPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN N A++ LA LGSG DIVS GEL R +AA A+++VFSGVGKT +E+ AL I Sbjct: 61 KANGNLAILNLLARLGSGFDIVSGGELARVIAAGGDAKKVVFSGVGKTEEEMRYALGQDI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LNQ A S+GK A I+ R+NPDI+A TH ISTG K++KFGIPI + Sbjct: 121 LCFNVESEPELERLNQVAGSMGKVARISIRINPDIDAGTHPYISTGLKQNKFGIPIERAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y YA++LP ++I+GVD HIGSQ+ +I F +A L L +L + G I H+DVGGG Sbjct: 181 EVYRYAASLPNLQITGVDCHIGSQLTEISPFLEAVDKLLALIDELSAAGIKIHHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y+ + PP S+YA + Q + ++ EPGR ++A+ GIL TKV +K D+ Sbjct: 241 LGVNYNDE-TPPHPSEYALALKQKLQDRDLTLMFEPGRAIMANAGILATKVEYLKAGEDR 299 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RP+LY A+ VN + R H D+VGPICETGDF+ +R++A Sbjct: 300 HFAIVDAAMNDLIRPSLYSAWM-NIIPVNRSLPRDAHHYDVVGPICETGDFLGKDRELA- 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGD L + GAYG + YN+R E++V+G Q H++R R L + + + Sbjct: 358 IAPGDYLVVRSAGAYGFSMASNYNARSRAAEVLVDGEQPHLVREREPLASLWQFEHL 414 >gi|124516709|gb|EAY58217.1| Diaminopimelate decarboxylase [Leptospirillum rubarum] Length = 414 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 181/416 (43%), Positives = 259/416 (62%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L E+V + K+ V +P Y YS A+ + Y ++ AF G T++ YA+K Sbjct: 1 MNGFEYKGHELFVEDVPVRKIVSSVDSPVYIYSEKALREAYSSYQQAFQGHRTLIAYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN N ++ L +GSG D+VS GEL RA A +P++RIVF+GVGKT E+ A+ +GI Sbjct: 61 ANGNLQILSMLGKMGSGADVVSGGELFRARRAGIPSDRIVFAGVGKTDGEMREAIDAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL L++ A S+GK AP+A RVNPD++ TH ISTG K+ KFGIP+ Q Sbjct: 121 MFNVESSMELDRLSRVASSMGKVAPVALRVNPDVDPKTHPYISTGMKKSKFGIPVDQALE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A+ LPG++I G+ HIGSQ+ +I F AF + + L+ NG + +DVGGGL Sbjct: 181 EYRRAARLPGIRIVGIHQHIGSQLTEISPFRDAFDRMVAFARLLKENGIEVTWLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + +PP+ + A I L IILEPGR +V + GILVT+V +K+++ K Sbjct: 241 GIRY-GNEKPPTPREVAHEILSRLEGLNVGIILEPGRSIVGNAGILVTEVQYLKETSVKM 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP+LY A+H++ +V G D+VGP+CETGDF+ +R++ Sbjct: 300 FYIADAGMNDLIRPSLYGAFHDLWPVVKKTGAGKKG--DLVGPVCETGDFLVQDRELPPA 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL + GAYG + YN+R E++V+G +F +IR R T+++LI + I Sbjct: 358 EPGDLLAVMSAGAYGFAMASNYNARPRPAEVLVSGDRFSVIRARETYEDLIRGEGI 413 >gi|46143532|ref|ZP_00204500.1| COG0019: Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208989|ref|YP_001054214.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae L20] gi|126097781|gb|ABN74609.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 416 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 265/416 (63%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE+VS+ + + TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MNHFNYKNQQLFAEDVSVSDIINQYGTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNIESIAELHRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A TLP VKI+G+D HIGSQ+ +++ F A L L +QL+ +G + H+D+GGGL Sbjct: 181 VYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P + +L+ + G +IILEPGR + A+ GILVTKV +K + D+ Sbjct: 241 GVPYNGEEPPHPTEYAKALLEKLKGYADLEIILEPGRAITANAGILVTKVEYLKANEDRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY V+ + R D+VGPICET DF+ +R++A Sbjct: 301 FAIVDTGMNDMIRPALYEAYMR-ITEVDQSLSREKAVYDVVGPICETSDFLGKDRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + GAYGA S TYNSR EIMV+G Q ++I+ R +F +L L+ + Sbjct: 359 EQGDLIAMRSAGAYGAAMSSTYNSRPQAVEIMVDGDQAYLIKARASFADLWRLEKL 414 >gi|145637736|ref|ZP_01793388.1| diaminopimelate decarboxylase [Haemophilus influenzae PittHH] gi|145269085|gb|EDK09036.1| diaminopimelate decarboxylase [Haemophilus influenzae PittHH] Length = 415 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 183/415 (44%), Positives = 263/415 (63%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKHNKLYAEDMPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ + + Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVDEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I +R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIVEIDRTL-EREKTIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD + GAYGA S YNSR E++V+ + ++IR R T QEL L+S Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRARTAEVLVDRDKSYLIRRRETLQELWALES 413 >gi|119776382|ref|YP_929122.1| diaminopimelate decarboxylase [Shewanella amazonensis SB2B] gi|119768882|gb|ABM01453.1| diaminopimelate decarboxylase [Shewanella amazonensis SB2B] Length = 414 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 257/416 (61%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y E L AE + LA TP Y YS +E+++ F A ++CYA+K Sbjct: 1 MDHFLYREERLFAEECDVAGLAAEHGTPLYVYSRATLERHWHAFDGAVASHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R L A ++VFSGVGKT+ E++LAL +GI Sbjct: 61 ANSNLAVLNVLARLGSGFDIVSGGELSRVLEAGGDPAKVVFSGVGKTVAEMELALNTGIM 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL+ LN+ A LGK AP++ RVNPD++A TH ISTG KE+KFGIP+ + + Sbjct: 121 CFNLESGAELELLNEVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIPMEEAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L+A A+ LP + + GVD HIGSQ+ +++ F A + L +L G I+H DVGGGL Sbjct: 181 LFARAAALPNLAVKGVDCHIGSQLTELKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + PP YA+ I + K+I EPGR + A+ GI VT+V+ K + DK Sbjct: 241 GVTYNGE-TPPHPDVYAAAILEKLNGRPLKLIFEPGRAIAANAGIFVTQVLYTKDNGDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D AMND +RP+LY A+ I V + D+VGP+CETGDF+ +R++A Sbjct: 300 FVIVDGAMNDLIRPSLYGAWQNIIPAVKT--NEPTTRCDVVGPVCETGDFLGKDRELA-A 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG + YN+R E+MV+G + +++R R +L + + + Sbjct: 357 GSGDLLVVRSAGAYGFTMASNYNTRPRAAELMVDGDKAYVVREREKLSQLWQGEQL 412 >gi|240851353|ref|YP_002972756.1| diaminopimelate decarboxylase [Bartonella grahamii as4aup] gi|240268476|gb|ACS52064.1| diaminopimelate decarboxylase [Bartonella grahamii as4aup] Length = 424 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 220/424 (51%), Positives = 298/424 (70%), Gaps = 1/424 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE SL LA V TPFYCYS A+ + + AF GM +++ YA+K Sbjct: 1 MDFFSYHQGMLHAEGCSLAVLAQEVGTPFYCYSANALVTRFKDYKKAFQGMPSLLAYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++ LA+ G+G D+VSEGELRRALA +PA RIV+SGVGKT+ EID AL IY Sbjct: 61 ANSNQAVLRLLANNGAGADVVSEGELRRALAVGIPAHRIVYSGVGKTMREIDFALAQDIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+QRAV+L K A ++ R+NPD++A THKKI+TGK E+KFGIP+ Sbjct: 121 CFNVESEPELEQLSQRAVALSKIARVSLRINPDVDAKTHKKITTGKSENKFGIPLLLARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A +LPG+++ G+DMHIGSQI ++ F +AF L+ D +QL S+G+ I HID+GGGL Sbjct: 181 AYKKADSLPGLQVCGIDMHIGSQICDLKPFEEAFFLIADCVRQLWSDGYAITHIDIGGGL 240 Query: 241 GI-AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI H PS DYA+L+ +Y L I++EPGR +V G+L+T V+ +K+ + Sbjct: 241 GIAYGCEQHTVPSPFDYAALVKKYIAPLGINIVVEPGRSIVGQAGVLMTSVLYLKRGQGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND MRPTLYDA+ + + A D I ADIVG +CETGD++AL+R + + Sbjct: 301 NFVIVDAAMNDLMRPTLYDAWQNVVLVKKAAKDAPLIRADIVGSVCETGDYLALDRCLPI 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDLL I + GAYGAV + TYNSRLL+PE++V + + ++RPR+ + +L+ D IP W Sbjct: 361 LAPGDLLAITQAGAYGAVMASTYNSRLLVPEVLVQDTCYAVVRPRLDYAQLMGCDHIPDW 420 Query: 420 LQKT 423 ++ + Sbjct: 421 VENS 424 >gi|301169445|emb|CBW29045.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus influenzae 10810] Length = 415 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 183/415 (44%), Positives = 264/415 (63%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKHNKLYAEDMPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ +++ Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I +R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIVEIDRTL-EREKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD + GAYGA S YNSR E++V+ + ++IR R T QEL L+S Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRARTAEVLVDRDKSYLIRRRETLQELWALES 413 >gi|229844596|ref|ZP_04464735.1| diaminopimelate decarboxylase [Haemophilus influenzae 6P18H1] gi|229812310|gb|EEP48000.1| diaminopimelate decarboxylase [Haemophilus influenzae 6P18H1] Length = 415 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 184/415 (44%), Positives = 263/415 (63%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKHNKLYAEDIPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ + + Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVDEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I +R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIIEIDRTL-EREKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD + AYGA S YNSR E++V+G Q ++IR R T QEL L+S Sbjct: 359 AEGDYIAQCSAAAYGASMSSNYNSRARTAEVLVDGDQSYLIRRRETLQELWALES 413 >gi|52426139|ref|YP_089276.1| LysA protein [Mannheimia succiniciproducens MBEL55E] gi|52308191|gb|AAU38691.1| LysA protein [Mannheimia succiniciproducens MBEL55E] Length = 416 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 258/416 (62%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L+AE++ + +LA TP Y YS +E+++ F +A +VC+A+K Sbjct: 1 MDFFQYKNNKLYAEDLLVSELAEQFGTPLYIYSRATLERHWKAFDSALGDHPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N N A+++ +A LG+G DIVS+GEL R +AA ++VFSGV K EI AL+ I Sbjct: 61 SNPNIAILQVMAKLGAGFDIVSQGELERVIAAGGDPHKVVFSGVAKNEKEIARALELDIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ +N+ A GK API+ RVNPD++A+TH ISTG KE+KFG+ + + Sbjct: 121 CFNVESLAELQRINEVAGKSGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVDEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +K++G+D HIGSQ+ +I+ F A L L +QLR +G ++H+D+GGGL Sbjct: 181 VYRLASRLPNIKVTGMDCHIGSQLTEIQPFLDATDRLILLLEQLREDGIELEHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+++ +II+EPGR + A+ GILVTKV +K + Sbjct: 241 GVTYSDETPPHPSEYATALLNKLKQYTNLEIIMEPGRAISANSGILVTKVEYLKSNETHN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY AY I I D+VGPICET DF+ R++A Sbjct: 301 FAIVDAGMNDMIRPALYQAYMNIIEADRTLNRESKI-YDVVGPICETSDFLGKQRRLA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGD L GAYGA S TYNSR L E+MV+GSQ H+IR R EL L+S+ Sbjct: 359 APGDYLVQRSAGAYGASMSSTYNSRPLTAEVMVDGSQAHLIRRRAELTELWALESL 414 >gi|170719432|ref|YP_001747120.1| diaminopimelate decarboxylase [Pseudomonas putida W619] gi|169757435|gb|ACA70751.1| diaminopimelate decarboxylase [Pseudomonas putida W619] Length = 415 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 266/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+AF Y +G L AE V+L +A TP Y YS IE Y ++++A G++ +VC+A+K Sbjct: 1 MNAFNYRDGGLFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSYTDALQGVEHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA +G+G DIVS GEL R LAA A+R+VFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARMGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L A +GK AP++ RVNPD++A TH ISTG KE+KFGI I + Sbjct: 121 CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP +++ GVD HIGSQ+ +E F A L DL +L G +++H+D+GGG+ Sbjct: 181 IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLDLVDRLADCGIHLRHLDLGGGV 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP +DY I + G+ ++ EPGR++VA+ G L+T+V +K + K Sbjct: 241 GVRYRDE-EPPLVADYIKAIRERVGDRDLALVFEPGRYIVANAGALLTRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + G+ D+VGPICETGDF+A +R++ Sbjct: 300 FAIIDAAMNDLIRPALYQAWMGVSAVTPREGEGR--AYDLVGPICETGDFLAKDRQLN-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL ++ GAYG V S YN+R EI+V+G Q +R R T EL +S+ Sbjct: 357 AEGDLLAVQSAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETIAELYAGESL 412 >gi|256829250|ref|YP_003157978.1| diaminopimelate decarboxylase [Desulfomicrobium baculatum DSM 4028] gi|256578426|gb|ACU89562.1| diaminopimelate decarboxylase [Desulfomicrobium baculatum DSM 4028] Length = 423 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 184/414 (44%), Positives = 257/414 (62%), Gaps = 3/414 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y G LHAE++++ L + TP Y YS T ++++Y F +AFDG+D + CY++K Sbjct: 1 MHHFQYKNGQLHAEDIAVADLVYEYGTPLYIYSATTLKRHYKAFDSAFDGIDHLTCYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN + +K LA G+G DIVS GEL RAL A V ++IV+SGVGK EI AL + I Sbjct: 61 ANSNLSFLKILAQEGAGTDIVSGGELFRALRAGVDPKKIVYSGVGKKTVEIQEALFADIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ +N A + K A ++ R+NPD++ TH +STG KE+KFG+ Sbjct: 121 MFNVESVQELERINDVAGGVDKVARVSLRINPDVDPKTHPYVSTGLKENKFGLSRADALK 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A +LP V+ G+D HIGSQ+ Q+ F +A + L++ QL G I+++D+GGGL Sbjct: 181 AYALAQSLPNVEPIGMDCHIGSQLTQLSPFMEALEKLKEFHGQLVQMGIKIKYMDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ + PP + + + L +ILEPGR + + GILVT+V K + DKT Sbjct: 241 GITYNEE-APPHPEELGKALIESLKGLDVTLILEPGRVIAGNTGILVTEVQYTKTNEDKT 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D AMND +RP+LY +YH I + G+ + AD+VGPICE+GDF+A NR Sbjct: 300 FVIVDAAMNDLVRPSLYGSYHRIASVRE--GNGEEMTADVVGPICESGDFLAKNRTFPKV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GDLL GAYG V S YNSR EIMV G + ++R R + +L+ L+ Sbjct: 358 AQGDLLAAFSAGAYGFVMSSQYNSRARAAEIMVEGDKHVLVRKREVYNDLVALE 411 >gi|297539787|ref|YP_003675556.1| diaminopimelate decarboxylase [Methylotenera sp. 301] gi|297259134|gb|ADI30979.1| diaminopimelate decarboxylase [Methylotenera sp. 301] Length = 416 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 186/418 (44%), Positives = 256/418 (61%), Gaps = 3/418 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M++F + H EN++L +A TP Y YS +A+ + + +FS F D +VC+A+K Sbjct: 1 MNSFTLKNNTFHVENIALTSIADEFNTPCYVYSKSALTQAFESFSAGFKDCDHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN + A++ A LG+G DIVS GEL R LAA ++IVFSGVGKT E+ AL + I+ Sbjct: 61 ANPSLAILNLFAKLGAGFDIVSGGELARVLAAGGDPKKIVFSGVGKTEAEMQAALNADIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SEL+ LN A +GK API+ RVNP+++A TH ISTG K +KFG+ Sbjct: 121 CFNVESASELQRLNDVASFMGKVAPISLRVNPNVDAKTHPYISTGLKNNKFGVAYEDALD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ + + I GVD HIGSQI ++ F AF + L L NG IQHID GGG+ Sbjct: 181 IYLQAAKMSNIAIHGVDCHIGSQITELSPFLDAFDRVLALVDALAENGIVIQHIDAGGGI 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP + +A+ + G+ K++ EPGR LV + G+L+TKV +K + K Sbjct: 241 GICYSDE-TPPEFTVFATAMRAKLGSRNVKLVFEPGRALVGNAGVLLTKVEYLKHTESKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND MRP LYDAYH+I + D + +IVGP+CE+GDF+ +R +AL Sbjct: 300 FAIVDAAMNDLMRPALYDAYHDIKAVQPRQDDTEALTYEIVGPVCESGDFLGHDRTLALV 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 GD+L I GAYG S YN+R E+MV+G Q H+IR R +L L+ +P Sbjct: 360 E-GDILAIMSAGAYGMSMSSNYNTRPRAAEVMVDGDQCHLIRKREQIADLFALEQCLP 416 >gi|262273212|ref|ZP_06051028.1| diaminopimelate decarboxylase [Grimontia hollisae CIP 101886] gi|262222790|gb|EEY74099.1| diaminopimelate decarboxylase [Grimontia hollisae CIP 101886] Length = 417 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 184/420 (43%), Positives = 264/420 (62%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE++ L +LA TP Y YS +E+++ F A ++CYA+ Sbjct: 1 MDYFNYQDDGQLWAEDLPLAQLAGQYGTPLYVYSRATLERHWHAFDKAVGDHPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS+GEL R +AA +++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNVLARLGSGFDIVSQGELERVVAAGGDPKKVVFSGVGKTAPEMARALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE+EL LNQ A LGKKAP++ R+NPD++A TH ISTG KE+KFGI + Sbjct: 121 KCFNVESEAELDRLNQIAGELGKKAPVSLRINPDVDAKTHPYISTGLKENKFGIAFDRAR 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y YA++LP + + G+D HIGSQ+ + F ++ L L LR +G +I H+DVGGG Sbjct: 181 EVYHYANSLPHLDVHGIDCHIGSQLTDLAPFIESTDRLLGLIDDLRQDGIHITHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y+ + P S +L+ + + + +++ EPGR + A+ G+L+TKV +K + +K Sbjct: 241 LGVTYNDEKPPEPSDYAKALLERLANHQEIELVFEPGRAIAANAGVLLTKVEFLKHNEEK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RP LY A+ EI + G+ D+VGP+CETGD++ +R + + Sbjct: 301 NFAIIDAAMNDLLRPALYQAWQEIVPVKPRQGEA--KTYDLVGPVCETGDYLGKDRSL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 GDLL + +GAYG V S YN+R E+MV+G+Q H++R R L L+ +P Sbjct: 358 LEAGDLLAVRSSGAYGFVMSSNYNTRCRAAEVMVDGNQSHLVRQREPLASLWALEQVLPE 417 >gi|258625070|ref|ZP_05719989.1| diaminopimelate decarboxylase [Vibrio mimicus VM603] gi|258582621|gb|EEW07451.1| diaminopimelate decarboxylase [Vibrio mimicus VM603] Length = 449 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 181/416 (43%), Positives = 252/416 (60%), Gaps = 4/416 (0%) Query: 2 SAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 F Y + G L AE V L LA+ TP Y YS +E+++ F + ++CYA+K Sbjct: 24 DYFNYQDDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVK 83 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ TLA LGSG DIVS GEL R LAA ++VFSGVGKT E+ ALQ I Sbjct: 84 ANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIK 143 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL LN+ A LG KAPI+ R+NPD++A TH ISTG +++KFGI + Sbjct: 144 CFNVESERELHRLNKVAAELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAE 203 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A +L + + G+D HIGSQ+ + F A L L L++ G +I+H+DVGGGL Sbjct: 204 VYRLAHSLSNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGL 263 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + ++I EPGR + A+ G+LVTKV +K + K Sbjct: 264 GVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKN 323 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ +I + G+ D+VGP+CET DF+ +R + + Sbjct: 324 FAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEA--QTYDLVGPVCETSDFLGKDRDL-VL 380 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + +GAYG S YNSR + E+MV+G++ H++R R T L L+S+ Sbjct: 381 EEGDLLAVRSSGAYGFTMSSNYNSRPRVAEVMVDGNKAHLVRQRETLSSLWALESV 436 >gi|206603531|gb|EDZ40011.1| Diaminopimelate decarboxylase [Leptospirillum sp. Group II '5-way CG'] Length = 414 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 180/416 (43%), Positives = 259/416 (62%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L E+V + K+ V +P Y YS A+ + Y ++ AF TM+ YA+K Sbjct: 1 MNGFEYKGHELFVEDVPVRKIVSSVDSPVYIYSEKALREAYSSYQEAFQSHRTMIAYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN N ++ L +GSG D+VS GEL RA A +P++RIVF+GVGKT E+ A+ +GI Sbjct: 61 ANGNLQILSMLGKMGSGADVVSGGELFRARRAGIPSDRIVFAGVGKTEGEMREAIDAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL L++ A S+GK AP+A RVNPD++ TH ISTG K+ KFGIP+ Q Sbjct: 121 MFNVESSMELDRLSRVASSMGKVAPVALRVNPDVDPKTHPYISTGMKKSKFGIPVDQALE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A+ LPG++I G+ HIGSQ+ +I F AF + + L+ NG + +DVGGGL Sbjct: 181 EYRRAARLPGIRIVGIHQHIGSQLTEISPFRDAFDRMVAFARLLKENGIEVSWLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + +PP+ + A I L IILEPGR +V + GILVT+V +K+++ K Sbjct: 241 GIRY-GNEKPPTPREVAHEILSRLEGLNVGIILEPGRSIVGNAGILVTEVQYLKETSVKM 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP+LY A+H++ ++ G+ D+VGP+CETGDF+ +R++ Sbjct: 300 FYIADAGMNDLIRPSLYGAFHDLWPVIKKPGNGKKG--DLVGPVCETGDFLVQDRELPPV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL + GAYG + YN+R E++V+G +F +IR R T+++LI + I Sbjct: 358 EPGDLLAVMSAGAYGFAMASNYNARPRPAEVLVSGDRFSVIRARETYEDLIRGEGI 413 >gi|170718155|ref|YP_001785183.1| diaminopimelate decarboxylase [Haemophilus somnus 2336] gi|168826284|gb|ACA31655.1| diaminopimelate decarboxylase [Haemophilus somnus 2336] Length = 417 Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 255/416 (61%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L AENVS++K+A TP Y YS +E+++ F NA ++C+A+K Sbjct: 1 MDFFLYKDGHLMAENVSVKKIAEQFGTPAYIYSRATLERHWHAFDNALGDHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N N A++ +A LGSG DIVS+GEL R L A +++VFSGV K+ EI AL+ GI Sbjct: 61 SNPNIAILNIMARLGSGFDIVSQGELERVLFAGGDPKKVVFSGVAKSEQEIARALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL +NQ A +GK A I+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNVESAAELTKINQVARKMGKIASISLRVNPDVDAHTHPYISTGLKENKFGVSVEQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS L +KI G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYRQASQLENIKIVGIDCHIGSQLTELQPFLDATDRLIVLMEQLKKDGITLEHVDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + +IILEPGR + A+ GIL+T+V IK + + Sbjct: 241 GVTYSDEKAPHPSEYATALLEKLKNYQNLEIILEPGRAITANAGILLTRVEYIKSNESRH 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY AY I + R D+VGPICET DF+ R +A Sbjct: 301 FAIVDTGMNDMIRPALYQAYMNIIEVDRTLS-RETKVYDVVGPICETSDFLGKQRSLA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD + GAYGA + TYNSR EIMV+G Q H+I+ R F EL L+ + Sbjct: 359 AQGDFIVQRSAGAYGASMASTYNSRPRAIEIMVDGEQVHLIKRREEFAELWHLEKL 414 >gi|113461849|ref|YP_719918.1| diaminopimelate decarboxylase [Haemophilus somnus 129PT] gi|112823892|gb|ABI25981.1| diaminopimelate decarboxylase [Haemophilus somnus 129PT] Length = 417 Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 255/416 (61%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L AENVS++K+A TP Y YS +E+++ F NA ++C+A+K Sbjct: 1 MDFFLYKDGHLMAENVSVKKIAEQFGTPAYIYSRATLERHWYAFDNALGDHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N N A++ +A LGSG DIVS+GEL R L A +++VFSGV K+ EI AL+ GI Sbjct: 61 SNPNIAILNIMAKLGSGFDIVSQGELERVLFAGGDPKKVVFSGVAKSEQEIARALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL +NQ A +GK A I+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNVESAAELIRINQVARKMGKIASISLRVNPDVDAHTHPYISTGLKENKFGVSVEQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS L +KI G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYRQASQLENIKIVGIDCHIGSQLTELQPFLDATDRLIVLMEQLKKDGITLEHVDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + +IILEPGR + A+ GIL+T+V IK + + Sbjct: 241 GVTYSDEKAPHPSEYATALLEKLKNYQNLEIILEPGRAITANAGILLTRVEYIKSNESRH 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY AY I + R D+VGPICET DF+ R +A Sbjct: 301 FAIVDTGMNDMIRPALYQAYMNIIEVDRTLS-RETKVYDVVGPICETSDFLGKQRSLA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD + GAYGA + TYNSR EIMV+G Q H+I+ R F EL L+ + Sbjct: 359 AQGDFIVQRSAGAYGASMASTYNSRPRAIEIMVDGEQVHLIKRREEFAELWHLEKL 414 >gi|16272667|ref|NP_438885.1| diaminopimelate decarboxylase [Haemophilus influenzae Rd KW20] gi|260579819|ref|ZP_05847649.1| diaminopimelate decarboxylase [Haemophilus influenzae RdAW] gi|1169235|sp|P44316|DCDA_HAEIN RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|1573731|gb|AAC22385.1| diaminopimelate decarboxylase (lysA) [Haemophilus influenzae Rd KW20] gi|260093103|gb|EEW77036.1| diaminopimelate decarboxylase [Haemophilus influenzae RdAW] Length = 415 Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats. Identities = 184/415 (44%), Positives = 264/415 (63%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKHNKLYAEDMPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGNRPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ I Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVRIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ +++ Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I +R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIVEIDRTL-EREKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD + GAYGA S YNSR E++V+G Q ++IR R T QEL L+S Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRARTAEVLVDGDQSYLIRRRETLQELWALES 413 >gi|315497547|ref|YP_004086351.1| diaminopimelate decarboxylase [Asticcacaulis excentricus CB 48] gi|315415559|gb|ADU12200.1| diaminopimelate decarboxylase [Asticcacaulis excentricus CB 48] Length = 438 Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats. Identities = 183/439 (41%), Positives = 267/439 (60%), Gaps = 12/439 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---------DGM 51 M+ F +G +HAE VS+ +LA V TP Y YS+ E+++ FS A Sbjct: 1 MNHFDIRDGEMHAEGVSIRELAERVGTPLYVYSSATFERHFQVFSQALWAQDALQSPKNE 60 Query: 52 DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 ++ YA KANSN AV++TLA G+G D VSEGE+R+AL A +P ERIVFSGVGKT +E+ Sbjct: 61 APLIAYATKANSNLAVLQTLAEQGAGADTVSEGEIRKALTAGIPPERIVFSGVGKTDEEM 120 Query: 112 DLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF 171 AL++GIY NVES+ EL+ L+ A SLG API R+NP + A H KI+TG +DKF Sbjct: 121 AFALKTGIYQLNVESKPELERLSHVAASLGLVAPIVIRINPGVGAGGHAKITTGGAKDKF 180 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 G+ + +LY A+ P + G+ HIGSQI + AF +R Q+LR+ G ++ Sbjct: 181 GVSAREAIALYGQAAADPNIAPMGIACHIGSQITDLAPMQAAFSKMRGWVQELRAGGLSV 240 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 + +D+GGGLG+ Y + PPS D+A ++ GNL + EPGR + A+ GILV++VI Sbjct: 241 ERLDLGGGLGVPYFNMSEPPSPEDFAQMVALTVGNLGVRYTFEPGRLIAANAGILVSRVI 300 Query: 292 SIKKSA--DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 I + + F+++D AMND +RP +YDAYH+I +V + D+VGP+CETGD Sbjct: 301 HIHEREDSGQKFLVVDAAMNDLIRPAMYDAYHDIRPVVAVQTN-ETATYDVVGPVCETGD 359 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 R + + GDL+ GAYGAV YNSR L PE++V + + ++RPR +++E Sbjct: 360 TFTRGRDLPALKAGDLVAFMSAGAYGAVMGSEYNSRPLAPEVLVRDTDWAVVRPRPSYEE 419 Query: 410 LIELDSIPAWLQKTPKQSS 428 ++ + +P WL+ ++ Sbjct: 420 MMNREVLPEWLRPHRVRAD 438 >gi|307250800|ref|ZP_07532729.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857159|gb|EFM89286.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 416 Score = 310 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 265/416 (63%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE+VS+ + + TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MNHFNYKNQQLFAEDVSVSDIINQHGTPAYIYSRATLERHWHAFDKAFGSHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGKPSKVVFSGVAKSHSEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNIESIAELHRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A TLP VKI+G+D HIGSQ+ +++ F A L L +QL+ +G + H+D+GGGL Sbjct: 181 VYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P + +L+ + G +IILEPGR + A+ GILVTKV +K + D+ Sbjct: 241 GVPYNGEEPPHPTEYAKALLEKLKGYADLEIILEPGRAITANAGILVTKVEYLKANEDRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY V+ + R D+VGPICET DF+ +R++A Sbjct: 301 FAIVDTGMNDMIRPALYEAYM-QITEVDQSLSREKAVYDVVGPICETSDFLGKDRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + GAYGA S TYNSR EIMV+G Q ++I+ R +F +L L+ + Sbjct: 359 EQGDLIAMRSAGAYGAAMSSTYNSRPQAVEIMVDGDQAYLIKARASFADLWRLEKL 414 >gi|223042044|ref|ZP_03612221.1| diaminopimelate decarboxylase [Actinobacillus minor 202] gi|223017161|gb|EEF15596.1| diaminopimelate decarboxylase [Actinobacillus minor 202] Length = 416 Score = 310 bits (793), Expect = 4e-82, Method: Composition-based stats. Identities = 188/418 (44%), Positives = 267/418 (63%), Gaps = 3/418 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L AE++++ + TP Y YS +E+++ F NAF ++C+A+K Sbjct: 1 MNHFEYKNQQLFAEDIAVSDIVKEYGTPAYIYSRATLERHWHAFDNAFGDHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R L A A ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNIMARLGSGFDIVSQGELERVLVAGGDASKVVFSGVAKSHTEIARALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SEL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNVESISELHRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVQQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP VKI+G+D HIGSQ+ +++ F A L L +QL+ +G + H+D+GGGL Sbjct: 181 VYRLASRLPNVKITGMDCHIGSQLTELQPFLDATDRLIILMEQLKEDGILLHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ YH + P + +L+ + +IILEPGR + A+ GILVTKV +K + D+ Sbjct: 241 GVPYHGEEPPHPTEYAKALLEKLKDYQDLEIILEPGRAITANAGILVTKVEYLKTNEDRR 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY E V+ + R D+VGPICET DF+ R++A Sbjct: 301 FAIVDTGMNDMIRPALYEAYME-LTEVDRSLPREKAVYDVVGPICETSDFLGKERELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 GDL+ + GAYGA S TYNSR EIMV+G+ ++I+ R +F++L L+ +P Sbjct: 359 AEGDLVAMRSAGAYGATMSSTYNSRPQAVEIMVDGANCYLIKERASFEDLWRLEKCLP 416 >gi|300113121|ref|YP_003759696.1| diaminopimelate decarboxylase [Nitrosococcus watsonii C-113] gi|299539058|gb|ADJ27375.1| diaminopimelate decarboxylase [Nitrosococcus watsonii C-113] Length = 417 Score = 310 bits (793), Expect = 4e-82, Method: Composition-based stats. Identities = 193/418 (46%), Positives = 259/418 (61%), Gaps = 4/418 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L AE + L ++A P Y YS AIE + F AF+ +CYA+K Sbjct: 2 MEYFHYCNNVLWAEEIPLPEIASRFGMPCYIYSRAAIEHQWRAFDQAFEEHPHQICYAVK 61 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R LAA RIVFSGVGK DE++ AL GI Sbjct: 62 ANSNLAVLDILARLGSGFDIVSVGELERVLAAGGDPGRIVFSGVGKRTDEMERALAVGIA 121 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL LN+ A LG++AP++ RVNPD++A TH I+TG +++KFGI I Q + Sbjct: 122 CFNVESEAELLRLNEIAGKLGQRAPVSLRVNPDVDARTHPYIATGLRDNKFGIEIDQALA 181 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A TLP + I GVD HIGSQ+ + F A + + L QL G ++HID+GGGL Sbjct: 182 VYARAVTLPHIDILGVDCHIGSQLTSLSPFLAALERVLALVDQLAKRGIEVRHIDLGGGL 241 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PPS YA+ + + +I +EPGR +V + G+L+T++ +K++ K Sbjct: 242 GIIYRDE-APPSPQQYAAALREKLAGRDLEIWIEPGRAIVGNGGVLLTRIEYLKQAPQKN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LYDA+ E V R + D+VGP+CETGDF+ R++A Sbjct: 301 FAIVDAAMNDLLRPALYDAWQE-IIPVTVDATREALLFDVVGPVCETGDFLGKQRQLA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 GDLL + GAYG S YNSR EIMV+G++ H++R R T + L E + ++P Sbjct: 359 EAGDLLVVRAAGAYGFTMSSNYNSRPRAAEIMVDGAEAHLVRERETVESLYEGESTLP 416 >gi|315121839|ref|YP_004062328.1| diaminopimelate decarboxylase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495241|gb|ADR51840.1| diaminopimelate decarboxylase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 422 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 337/422 (79%), Positives = 378/422 (89%), Gaps = 1/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+AFKY+ GSLHAE+VSLEK++ VQTPFYCY+T AIE+NYLTFS A DGM+TM+CYA+K Sbjct: 1 MNAFKYYRGSLHAEDVSLEKISQTVQTPFYCYATAAIEQNYLTFSRALDGMNTMICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAVI+TLA LGSGLDIVSEGEL RAL+A VPAE+IVFSGVGKTI E+DLALQ+GIY Sbjct: 61 ANSNQAVIQTLARLGSGLDIVSEGELHRALSAQVPAEKIVFSGVGKTISEMDLALQTGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ESESEL TLNQRA+SLGK API+FRVNPD+NANTHKKISTGKKEDKFGIPIHQIHS Sbjct: 121 CFNIESESELITLNQRAISLGKIAPISFRVNPDVNANTHKKISTGKKEDKFGIPIHQIHS 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY YA LPG+KISG+DMHIGSQI+QIESF +AFKLLR+ T +LRS+GHNIQHIDVGGGL Sbjct: 181 LYDYAKDLPGIKISGIDMHIGSQINQIESFCQAFKLLRETTLKLRSDGHNIQHIDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 HS+ PPS SDYASLIH+YFG+LQCKIILEPGRFLVAD GILV+KVIS+KKS DK Sbjct: 241 GITYCHSNPPPPSPSDYASLIHKYFGDLQCKIILEPGRFLVADAGILVSKVISVKKSTDK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILDVAMNDFMRPTLYDAYHEI YI +P RLH+ ADIVGPICETGDFIALNR I L Sbjct: 301 IFIILDVAMNDFMRPTLYDAYHEIKYISSPEEGRLHVQADIVGPICETGDFIALNRTIPL 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+ GD+LYIEK GAYGAVQSGTYNSR LIPE+MV SQFHIIRPRM+FQ+LIE+DS P W Sbjct: 361 PQAGDILYIEKAGAYGAVQSGTYNSRRLIPEVMVKDSQFHIIRPRMSFQKLIEMDSTPEW 420 Query: 420 LQ 421 L+ Sbjct: 421 LK 422 >gi|165976954|ref|YP_001652547.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303253397|ref|ZP_07339540.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246442|ref|ZP_07528515.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248567|ref|ZP_07530582.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307255425|ref|ZP_07537232.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259877|ref|ZP_07541591.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|165877055|gb|ABY70103.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302647742|gb|EFL77955.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306852646|gb|EFM84878.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854917|gb|EFM87105.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306861609|gb|EFM93596.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866047|gb|EFM97921.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 416 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 265/416 (63%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE+VS+ + + TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MNHFNYKNQQLFAEDVSVSDIINQHGTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNIESIAELHRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A TLP VKI+G+D HIGSQ+ +++ F A L L +QL+ +G + H+D+GGGL Sbjct: 181 VYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P + +L+ + G +IILEPGR + A+ GILVTKV +K + D+ Sbjct: 241 GVPYNGEEPPHPTEYAKALLEKLKGYADLEIILEPGRAITANAGILVTKVEYLKANEDRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY V+ + R D+VGPICET DF+ +R++A Sbjct: 301 FAIVDTGMNDMIRPALYEAYM-QITEVDQSLSREKAVYDVVGPICETSDFLGKDRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + GAYGA S TYNSR EIMV+G Q ++I+ R +F +L L+ + Sbjct: 359 EQGDLIAMRSAGAYGAAMSSTYNSRPQAVEIMVDGDQAYLIKARASFADLWRLEKL 414 >gi|154245684|ref|YP_001416642.1| diaminopimelate decarboxylase [Xanthobacter autotrophicus Py2] gi|154159769|gb|ABS66985.1| diaminopimelate decarboxylase [Xanthobacter autotrophicus Py2] Length = 422 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 228/421 (54%), Positives = 298/421 (70%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G L AE+V + LA V+TPFYCYS+ +E++Y F AF G D ++CYALK Sbjct: 1 MHHFDYRNGRLFAEDVDITPLAAEVRTPFYCYSSATLERHYQVFMEAFSGRDVLLCYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQ+VI TLA LG+G DIVS GEL RA AA VPAERIVFSGVGKT +E+ AL GI Sbjct: 61 ANSNQSVIATLARLGAGADIVSAGELARARAAGVPAERIVFSGVGKTREEMAAALDGGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL L++ A ++G AP++ RVNPD++A THKKISTGK KFGIPI + Sbjct: 121 CFNVESEPELAALSEVATAMGVSAPVSIRVNPDVDAKTHKKISTGKSATKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y YA+ LPG+ I+GVDMHIGSQI + F A LL +L + L + GH + H+D+GGGL Sbjct: 181 VYDYAARLPGLAITGVDMHIGSQITDMAPFDNAVTLLAELARDLLAAGHRLHHMDLGGGL 240 Query: 241 GIAY-HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 G+ Y SD PP S YA ++ + G+L+ ++ E GR LVA+ GILVT+VI +K+ K Sbjct: 241 GVPYAASDPVPPPPSAYAEVVSRALGDLKLPLVFEMGRMLVANAGILVTRVIYVKEGEGK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFV++D AMND +RPTLY+A+H+I +V PA D + AD+VGP+CETGDF+AL+R + Sbjct: 301 TFVVVDAAMNDLIRPTLYEAHHDIIPVVEPAADAPLVVADVVGPVCETGDFLALDRPLPR 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDLL + GAYGAVQ+ TYN+R L+PE++V G+ ++RPR+ +LI LD W Sbjct: 361 LKAGDLLAVMTAGAYGAVQASTYNTRPLVPEVLVRGAAAAVVRPRLEVADLIALDRPAPW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|254483250|ref|ZP_05096482.1| diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2148] gi|214036473|gb|EEB77148.1| diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2148] Length = 416 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 172/419 (41%), Positives = 253/419 (60%), Gaps = 4/419 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F + +G L AE+ S+ +A TP Y YS +E + + +A G + +VCYA+K Sbjct: 1 MENFPFRDGELFAEDTSVSDIADRFGTPCYIYSRAGLEGAFRQYQDALAGCEHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ TLA LG+G DIVS GEL R +AA ++VFSGVGK DE+ AL+ I Sbjct: 61 ANSNLAVLDTLARLGAGFDIVSAGELHRVIAAGGDPGKVVFSGVGKKPDEMAQALELDIA 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL+ L A GK A ++ RVNPD++A TH ISTG +E+KFG+ + + Sbjct: 121 CFNLESAAELEVLAGVAAHAGKTARVSVRVNPDVDAQTHPYISTGLRENKFGVTMEEALL 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP +++ GVD HIGSQ+ QI F A K L L +L G ++H+D+GGGL Sbjct: 181 VYQRAAKLPNIEVVGVDCHIGSQLTQISPFIDALKRLLALIDELAEQGIVLRHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PPS + Y + + + G+ +++ EPGR + A+ G+L+T V +K + D Sbjct: 241 GVCYKDE-EPPSIAQYVAAVREELGDRPLQLVFEPGRSIAANAGLLLTTVEYLKTTPDHN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP LY A+ + D+VGP+CETGDF+ R+++ Sbjct: 300 FALVDAAMNDMIRPALYQAWLD-IRNTRENNVGQSASWDVVGPVCETGDFLGKQRQLS-L 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + GAYG S YNSR E+MV+G + H++R R + ++I + +P Sbjct: 358 QQGDLLALFGAGAYGFTMSSNYNSRPRAAEVMVDGEKVHLVRERESIADIIRGEHRLPD 416 >gi|190150854|ref|YP_001969379.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264204|ref|ZP_07545795.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915985|gb|ACE62237.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870450|gb|EFN02203.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 416 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 265/416 (63%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE+VS+ + + TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MNHFNYKNQQLFAEDVSVSDIINQHGTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNIESIAELHRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A +LP VKI+G+D HIGSQ+ +++ F A L L +QL+ +G + H+D+GGGL Sbjct: 181 VYRLAKSLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P + +L+ + G +IILEPGR + A+ GILVTKV +K + D+ Sbjct: 241 GVPYNGEEPPHPTEYAKALLEKLKGYADLEIILEPGRAITANAGILVTKVEYLKANEDRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY V+ + R D+VGPICET DF+ +R++A Sbjct: 301 FAIVDTGMNDMIRPALYEAYM-QITEVDQSLSREKAVYDVVGPICETSDFLGKDRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + GAYGA S TYNSR EIMV+G Q ++I+ R +F +L L+ + Sbjct: 359 EQGDLIAMRSAGAYGAAMSSTYNSRPQAVEIMVDGDQAYLIKARASFADLWRLEKL 414 >gi|332139612|ref|YP_004425350.1| putative diaminopimelate decarboxylase [Alteromonas macleodii str. 'Deep ecotype'] gi|327549634|gb|AEA96352.1| putative diaminopimelate decarboxylase [Alteromonas macleodii str. 'Deep ecotype'] Length = 416 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 184/418 (44%), Positives = 255/418 (61%), Gaps = 3/418 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE V++ +A TP Y YS +E+++ F++A +VCYA+K Sbjct: 1 MDYFAYSQGQLHAEEVAVSDIAAQHGTPVYIYSRATLERHWHAFNDAIGEHPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LGSG DIVS GEL R + A A ++VFSGVGK DEI AL+ GI Sbjct: 61 ANSNIGVLSVLAKLGSGFDIVSAGELARVIEAGGDASKVVFSGVGKKHDEIRYALEQGIM 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL +N+ A +G KAPI+ R+NPD++A TH ISTG K +KFGI + + Sbjct: 121 CFNVESEPELHRINEVAGEVGVKAPISLRINPDVDAKTHPYISTGLKANKFGIARERALA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A++LP + + G+D HIGSQ+ +I F A + L L +L I+H+DVGGGL Sbjct: 181 TYELAASLPNLNVVGMDCHIGSQLTEIGPFVDALERLLVLIDELAERNIIIEHLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P + ++ + G K+ILEPGR + A+ GILVT+V IK+ +K+ Sbjct: 241 GVTYNDEEPPHPKAYAQAMAEKMVGRENLKLILEPGRAIAANAGILVTEVEFIKEGEEKS 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ V D+VGP+CETGDFI +R++A Sbjct: 301 FAIVDAAMNDLLRPALYSAWQ-KIIPVKEESTAKLHTYDVVGPVCETGDFIGKDRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 P DLL + GAYG V + YNSR EIMV+G + ++R R ++L + + +P Sbjct: 359 EPTDLLAVRSAGAYGFVMASNYNSRCRPAEIMVDGDKAIVVREREKQKDLWQGEHKLP 416 >gi|325111253|ref|YP_004272321.1| diaminopimelate decarboxylase [Planctomyces brasiliensis DSM 5305] gi|324971521|gb|ADY62299.1| diaminopimelate decarboxylase [Planctomyces brasiliensis DSM 5305] Length = 429 Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats. Identities = 167/422 (39%), Positives = 244/422 (57%), Gaps = 10/422 (2%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + F+Y L+ E+V + +LA TP + YS + + AF+ D ++CY++KA Sbjct: 6 NPFEYRNNELYCEDVPVRQLAEEYGTPLWVYSEAKFLEEFRQLKKAFEACDPVICYSVKA 65 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN V+K L GS D+VS GEL R L A R+VF+GVGKT EI LAL+ I Sbjct: 66 NSNLHVLKALNEAGSSFDVVSGGELFRVLKAGADTTRVVFAGVGKTDAEIRLALEQNILM 125 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVESE+EL + A + AP+A R+NPDI+A THKK +TGKK +KFG+ I + ++L Sbjct: 126 FNVESEAELDAIAAVAREMDVVAPVALRLNPDIDAKTHKKTTTGKKGNKFGMDIERHNAL 185 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 T P +++ G+ MH+GS I + + +A K D+ LR GH+I +++GGG Sbjct: 186 ADKVLTEPHLELRGIHMHLGSPILTTDPYEQAAKKAVDVIADLRKKGHDISWVNLGGGFA 245 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 ++Y + P S YAS+I + CK+ LEPGR ++ + +LV++VI K+ K F Sbjct: 246 LSYR-NDEAPDYSTYASVIVPHIQAAGCKLALEPGRSIIGNACVLVSQVIYTKREGGKLF 304 Query: 302 VILDVAMNDFMRPTLYDAYH---------EINYIVNPAGDRLHIHADIVGPICETGDFIA 352 VI D AMND RP +YDA+H + Y A D+VGP+CE+ D+ A Sbjct: 305 VIQDGAMNDLARPAMYDAFHRVWPVQTDVPLPYDCEAAEIEGCEATDVVGPVCESSDYFA 364 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 +R + + GDL+ GAYG+ S YNSR E++V+GS+ +IR R T+ +LI Sbjct: 365 KDRALPPLQRGDLISTFSAGAYGSAMSSNYNSRPRGAEVLVSGSEARLIRKRETYDDLIA 424 Query: 413 LD 414 L+ Sbjct: 425 LE 426 >gi|91202264|emb|CAJ75324.1| similar to diaminopimelate decarboxylase lysa [Candidatus Kuenenia stuttgartiensis] Length = 429 Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats. Identities = 171/429 (39%), Positives = 247/429 (57%), Gaps = 14/429 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +L+ E V ++ + TP Y YS AI + AF +D +C+++K Sbjct: 1 MDAFHYDGNTLYCERVKIKDIVSETGTPVYIYSKNAILTRFNELKTAFQEVDATICFSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN +V K LA GSG D+VS GEL RAL A +IVF+GVGKT EI AL++ I+ Sbjct: 61 SNSNLSVCKILADEGSGFDVVSGGELFRALKAGGKPSKIVFAGVGKTDKEIQYALENDIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES +E++ +N A GK A +A R+NPDI+A TH K +TGKKE+KFGI + + Sbjct: 121 MFNVESIAEIEHINAAACRAGKTAKVALRINPDIDAKTHAKTTTGKKENKFGIDLIVAET 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + A V I G+ +H+GS I + + A K + ++ R+ G NIQ++++GGG Sbjct: 181 IIEKAKAYTNVTICGIHVHLGSPIYSADPYVNALKKITMFMEKCRNAGINIQYLNIGGGY 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS-ADK 299 I+Y + + DY++ I + ++C++I+EPGRF+ + GILVT VI K++ K Sbjct: 241 CISYTGE-KVIEPKDYSTQILPFAKEMKCRVIMEPGRFITGNSGILVTSVIYNKQNSHGK 299 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH------------ADIVGPICET 347 FVI D AMND +RP LYDA+H I + DIVGP+CE+ Sbjct: 300 KFVICDAAMNDLLRPALYDAFHRIWPVNTSVAMPDVETPDTSVAKQGMDLVDIVGPVCES 359 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D A +R I GDLL I GAYG S +YNSR EI+V+ ++ +IR R T+ Sbjct: 360 SDVFAKDRAIPPVNEGDLLAIFSAGAYGFTMSSSYNSRPRSCEILVDRDKYIVIRKRETY 419 Query: 408 QELIELDSI 416 ++LI + + Sbjct: 420 EDLIAGEEL 428 >gi|303250943|ref|ZP_07337133.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650215|gb|EFL80381.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 416 Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 264/416 (63%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE+VS+ + + TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MNHFNYKNQQLFAEDVSVSDIINQYGTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ + LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMVRLGSGFDIVSQGELERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNIESIAELHRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A TLP VKI+G+D HIGSQ+ +++ F A L L +QL+ +G + H+D+GGGL Sbjct: 181 VYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P + +L+ + G +IILEPGR + A+ GILVTKV +K + D+ Sbjct: 241 GVPYNGEEPPHPTEYAKALLEKLKGYADLEIILEPGRAITANAGILVTKVEYLKANEDRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY V+ + R D+VGPICET DF+ +R++A Sbjct: 301 FAIVDTGMNDMIRPALYEAYM-QITEVDQSLSREKAVYDVVGPICETSDFLGKDRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + GAYGA S TYNSR EIMV+G Q ++I+ R +F +L L+ + Sbjct: 359 EQGDLIAMRSAGAYGAAMSSTYNSRPQAVEIMVDGDQAYLIKARASFADLWRLEKL 414 >gi|192360548|ref|YP_001983745.1| diaminopimelate decarboxylase [Cellvibrio japonicus Ueda107] gi|190686713|gb|ACE84391.1| diaminopimelate decarboxylase [Cellvibrio japonicus Ueda107] Length = 415 Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 263/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F G L+AE++ L +A TP Y YS A + YL+++ A M+CYA+K Sbjct: 1 MQYFTERNGELYAEDLPLRDVAERFGTPCYVYSRAAFTQQYLSYAQALGSHPGMICYAIK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN A++ LA LG+G DIVS GEL R L A RIVFSGVGK++ E+ AL GI+ Sbjct: 61 ANSNLAILNMLAKLGAGFDIVSGGELERVLYAGGNPSRIVFSGVGKSVQEMARALDVGIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL+ L Q A GK A ++ RVNPD++ANTH ISTG KE+KFGI I + + Sbjct: 121 CFNVESEAELELLAQVAADKGKVANVSLRVNPDVDANTHPYISTGLKENKFGIAIERAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LP + I G+D HIGSQ+ Q+ F A + L L +L + G +I H+D+GGGL Sbjct: 181 VYARAAQLPSLAIKGLDCHIGSQLTQLTPFLDALERLLLLIDELAAKGIHISHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP ++Y + I G+ ++ EPGR + A+ G+L+T+V+ +K + K Sbjct: 241 GVTYRDE-TPPPVAEYMAAIKAKLGDRPLALMFEPGRSISANAGVLLTQVMFLKPTEHKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP+LY A+ +I + + D+VGPICETGDF+ R++A Sbjct: 300 FAVIDAAMNDNIRPSLYQAWQDIRPLQQR--GQAPKTWDLVGPICETGDFLGKGRELA-I 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL + GAYG S YN+R E++V+G Q H++R R TF++LI +++ Sbjct: 357 EPGDLLAVMSAGAYGFSMSSNYNTRGRAAEVVVDGDQMHLVRARETFEDLIRGEAL 412 >gi|158426283|ref|YP_001527575.1| diaminopimelate decarboxylase [Azorhizobium caulinodans ORS 571] gi|158333172|dbj|BAF90657.1| diaminopimelate decarboxylase [Azorhizobium caulinodans ORS 571] Length = 420 Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats. Identities = 215/420 (51%), Positives = 292/420 (69%), Gaps = 2/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F + +G L AE+V + LA V TPFYCYST +E++Y F AF + ++CYALK Sbjct: 1 MHHFIHHDGRLKAEDVDIATLAEEVGTPFYCYSTATLERHYRVFKAAFAEREMLLCYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAVI TLA +G+G DIVS GEL+RALAA +P ERIVFSGVGKT +E+ AL++GI Sbjct: 61 ANSNQAVIATLARMGAGADIVSGGELKRALAAGIPGERIVFSGVGKTREEMAQALEAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL L+Q A ++G+ A I+ R+NPD++A TH KISTGK E+KFGIPI + + Sbjct: 121 CFNVESEPELSALSQVATAMGRTANISIRINPDVDAKTHAKISTGKSENKFGIPISRART 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+TLPG+K++G+DMHIGSQI + F A L+ +L + L + GH + H+D+GGGL Sbjct: 181 VYAEAATLPGLKVAGIDMHIGSQITDLGPFENATLLMAELARDLLAQGHALHHLDLGGGL 240 Query: 241 G-IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 G D PPS YA++I + L ++ E GR +VA+ GILV +VI +K K Sbjct: 241 GVPYVAGDPVPPSPDAYAAVITRALKGLDLPLVFEMGRMIVANAGILVARVIYVKHGEGK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+ H V+ D+VGP+CETGD++AL+R++ Sbjct: 301 TFVIVDAAMNDLIRPTLYE-AHHDIVPVHQRPSAPTAKVDVVGPVCETGDYLALDRELPE 359 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDL+ + GAYGAVQ+ TYN+R LI E++V+G Q ++RPR+ ++LI LD +P+W Sbjct: 360 LMPGDLIAVMTAGAYGAVQASTYNTRPLIAEVLVSGHQAAVVRPRVEVEQLIGLDRLPSW 419 >gi|221134092|ref|ZP_03560397.1| putative diaminopimelate decarboxylase [Glaciecola sp. HTCC2999] Length = 416 Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats. Identities = 183/414 (44%), Positives = 257/414 (62%), Gaps = 2/414 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G+LHAENV+L +A TP Y YS +E+++ F A +VC+A+K Sbjct: 1 MDFFDYQNGTLHAENVALHDIAAKHGTPTYVYSRKTLERHWHKFDEALGDHPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LGSG DIVS GEL+R +AA +++VFSGVGKT DEI+ ALQ I Sbjct: 61 ANSNIGVLSVLAKLGSGFDIVSGGELKRVIAAGGDPQKVVFSGVGKTADEIEFALQQNIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL +N A L + A I+ R+NPD++ANTH ISTG K +KFGI + Sbjct: 121 CFNVESFAELDRINAVAAKLDRPARISLRINPDVDANTHPYISTGLKANKFGIAHTKAVE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA L ++I G+D HIGSQ+ + F A + L L +L ++ +I+H+DVGGGL Sbjct: 181 TYLYAKALSYLEIKGMDCHIGSQLTETAPFVDALERLLGLVDELATHDIHIEHLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y ++ P S +++ + G KII+EPGR + A+ G+L+TKV +K++ DK Sbjct: 241 GVTYANETPPLPSEYASAIAQKMQGREHMKIIMEPGRAIAANAGVLLTKVEFLKQNEDKH 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ I I P D D+VGP+CETGDF+ +R++A+ Sbjct: 301 FAIIDAAMNDLLRPALYSAWQNIVPIT-PRDDVAAAVYDVVGPVCETGDFLGKDRELAIV 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 P D+L ++ GAYG V + YN+R EIMV+G ++R R ++L + Sbjct: 360 -PDDILAVKSAGAYGFVMASNYNTRARPAEIMVDGDHVIVVREREKVEDLWHNE 412 >gi|297787806|pdb|3N2B|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Diaminopimelate Decarboxylase (Lysa) From Vibrio Cholerae. gi|297787807|pdb|3N2B|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Diaminopimelate Decarboxylase (Lysa) From Vibrio Cholerae. gi|297787808|pdb|3N2B|C Chain C, 1.8 Angstrom Resolution Crystal Structure Of Diaminopimelate Decarboxylase (Lysa) From Vibrio Cholerae. gi|297787809|pdb|3N2B|D Chain D, 1.8 Angstrom Resolution Crystal Structure Of Diaminopimelate Decarboxylase (Lysa) From Vibrio Cholerae Length = 441 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 180/420 (42%), Positives = 255/420 (60%), Gaps = 5/420 (1%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L AE V L LA+ TP Y YS +E+++ F + ++CYA+ Sbjct: 25 MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 84 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R LAA ++VFSGVGKT E+ ALQ I Sbjct: 85 KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 144 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG KAPI+ R+NPD++A TH ISTG +++KFGI + Sbjct: 145 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 204 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A +LP + + G+D HIGSQ+ + F A L L L++ G +I+H+DVGGG Sbjct: 205 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 264 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+LVTKV +K + K Sbjct: 265 LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK 324 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RP LY A+ +I + G+ D+VGP+CET DF+ +R + + Sbjct: 325 NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEA--QTYDLVGPVCETSDFLGKDRDL-V 381 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + +GAYG S YN+R + E+MV+G++ +++R R L L+ +P Sbjct: 382 LQEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLPE 441 >gi|15640156|ref|NP_229783.1| diaminopimelate decarboxylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587729|ref|ZP_01677490.1| diaminopimelate decarboxylase [Vibrio cholerae 2740-80] gi|121728316|ref|ZP_01681347.1| diaminopimelate decarboxylase [Vibrio cholerae V52] gi|147674363|ref|YP_001218294.1| diaminopimelate decarboxylase [Vibrio cholerae O395] gi|153214838|ref|ZP_01949646.1| diaminopimelate decarboxylase [Vibrio cholerae 1587] gi|153803072|ref|ZP_01957658.1| diaminopimelate decarboxylase [Vibrio cholerae MZO-3] gi|153818954|ref|ZP_01971621.1| diaminopimelate decarboxylase [Vibrio cholerae NCTC 8457] gi|153822335|ref|ZP_01975002.1| diaminopimelate decarboxylase [Vibrio cholerae B33] gi|153826290|ref|ZP_01978957.1| diaminopimelate decarboxylase [Vibrio cholerae MZO-2] gi|153830026|ref|ZP_01982693.1| diaminopimelate decarboxylase [Vibrio cholerae 623-39] gi|227080361|ref|YP_002808912.1| diaminopimelate decarboxylase [Vibrio cholerae M66-2] gi|229508403|ref|ZP_04397907.1| diaminopimelate decarboxylase [Vibrio cholerae BX 330286] gi|229508916|ref|ZP_04398406.1| diaminopimelate decarboxylase [Vibrio cholerae B33] gi|229515840|ref|ZP_04405298.1| diaminopimelate decarboxylase [Vibrio cholerae TMA 21] gi|229517030|ref|ZP_04406476.1| diaminopimelate decarboxylase [Vibrio cholerae RC9] gi|229520083|ref|ZP_04409511.1| diaminopimelate decarboxylase [Vibrio cholerae TM 11079-80] gi|229525021|ref|ZP_04414426.1| diaminopimelate decarboxylase [Vibrio cholerae bv. albensis VL426] gi|229527133|ref|ZP_04416527.1| diaminopimelate decarboxylase [Vibrio cholerae 12129(1)] gi|229606676|ref|YP_002877324.1| diaminopimelate decarboxylase [Vibrio cholerae MJ-1236] gi|254291934|ref|ZP_04962715.1| diaminopimelate decarboxylase [Vibrio cholerae AM-19226] gi|254851509|ref|ZP_05240859.1| diaminopimelate decarboxylase [Vibrio cholerae MO10] gi|255743922|ref|ZP_05417877.1| diaminopimelate decarboxylase [Vibrio cholera CIRS 101] gi|262151161|ref|ZP_06028300.1| diaminopimelate decarboxylase [Vibrio cholerae INDRE 91/1] gi|262167030|ref|ZP_06034747.1| diaminopimelate decarboxylase [Vibrio cholerae RC27] gi|297581834|ref|ZP_06943755.1| diaminopimelate decarboxylase [Vibrio cholerae RC385] gi|298501107|ref|ZP_07010907.1| diaminopimelate decarboxylase [Vibrio cholerae MAK 757] gi|13124077|sp|Q9KVL7|DCDA_VIBCH RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|9654525|gb|AAF93302.1| diaminopimelate decarboxylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548028|gb|EAX58106.1| diaminopimelate decarboxylase [Vibrio cholerae 2740-80] gi|121629446|gb|EAX61875.1| diaminopimelate decarboxylase [Vibrio cholerae V52] gi|124115081|gb|EAY33901.1| diaminopimelate decarboxylase [Vibrio cholerae 1587] gi|124121391|gb|EAY40134.1| diaminopimelate decarboxylase [Vibrio cholerae MZO-3] gi|126510516|gb|EAZ73110.1| diaminopimelate decarboxylase [Vibrio cholerae NCTC 8457] gi|126520161|gb|EAZ77384.1| diaminopimelate decarboxylase [Vibrio cholerae B33] gi|146316246|gb|ABQ20785.1| diaminopimelate decarboxylase [Vibrio cholerae O395] gi|148874511|gb|EDL72646.1| diaminopimelate decarboxylase [Vibrio cholerae 623-39] gi|149739958|gb|EDM54137.1| diaminopimelate decarboxylase [Vibrio cholerae MZO-2] gi|150422144|gb|EDN14110.1| diaminopimelate decarboxylase [Vibrio cholerae AM-19226] gi|227008249|gb|ACP04461.1| diaminopimelate decarboxylase [Vibrio cholerae M66-2] gi|227011873|gb|ACP08083.1| diaminopimelate decarboxylase [Vibrio cholerae O395] gi|229335364|gb|EEO00847.1| diaminopimelate decarboxylase [Vibrio cholerae 12129(1)] gi|229338602|gb|EEO03619.1| diaminopimelate decarboxylase [Vibrio cholerae bv. albensis VL426] gi|229342871|gb|EEO07861.1| diaminopimelate decarboxylase [Vibrio cholerae TM 11079-80] gi|229346093|gb|EEO11065.1| diaminopimelate decarboxylase [Vibrio cholerae RC9] gi|229347103|gb|EEO12064.1| diaminopimelate decarboxylase [Vibrio cholerae TMA 21] gi|229354033|gb|EEO18966.1| diaminopimelate decarboxylase [Vibrio cholerae B33] gi|229354676|gb|EEO19598.1| diaminopimelate decarboxylase [Vibrio cholerae BX 330286] gi|229369331|gb|ACQ59754.1| diaminopimelate decarboxylase [Vibrio cholerae MJ-1236] gi|254847214|gb|EET25628.1| diaminopimelate decarboxylase [Vibrio cholerae MO10] gi|255738405|gb|EET93795.1| diaminopimelate decarboxylase [Vibrio cholera CIRS 101] gi|262024548|gb|EEY43232.1| diaminopimelate decarboxylase [Vibrio cholerae RC27] gi|262031055|gb|EEY49680.1| diaminopimelate decarboxylase [Vibrio cholerae INDRE 91/1] gi|297533928|gb|EFH72768.1| diaminopimelate decarboxylase [Vibrio cholerae RC385] gi|297540141|gb|EFH76202.1| diaminopimelate decarboxylase [Vibrio cholerae MAK 757] Length = 417 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 180/420 (42%), Positives = 255/420 (60%), Gaps = 5/420 (1%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L AE V L LA+ TP Y YS +E+++ F + ++CYA+ Sbjct: 1 MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R LAA ++VFSGVGKT E+ ALQ I Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG KAPI+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A +LP + + G+D HIGSQ+ + F A L L L++ G +I+H+DVGGG Sbjct: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+LVTKV +K + K Sbjct: 241 LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RP LY A+ +I + G+ D+VGP+CET DF+ +R + + Sbjct: 301 NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEA--QTYDLVGPVCETSDFLGKDRDL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + +GAYG S YN+R + E+MV+G++ +++R R L L+ +P Sbjct: 358 LQEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLPE 417 >gi|109900371|ref|YP_663626.1| diaminopimelate decarboxylase [Pseudoalteromonas atlantica T6c] gi|109702652|gb|ABG42572.1| diaminopimelate decarboxylase [Pseudoalteromonas atlantica T6c] Length = 415 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 187/416 (44%), Positives = 253/416 (60%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L+AE+VSL +A TP Y YS IE+++L F A +VCYA+K Sbjct: 1 MDFFGYNNKKLYAEDVSLHDIAQTHGTPCYVYSKATIERHWLAFDKAAGAHPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LGSG DIVS GEL R L A ++VFSGVGKT +EI L LQ I Sbjct: 61 ANSNLGVLSVLAKLGSGFDIVSGGELLRVLKAGGDPTKVVFSGVGKTPEEIALGLQHNIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ ++Q AV+ K API+ RVNPD++A TH ISTG K +KFGI Q Sbjct: 121 CFNVESPAELERISQVAVAENKIAPISIRVNPDVDAKTHPYISTGLKANKFGIEREQAVE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y +A++LP ++I G+D HIGSQ+ +I F A L L +L NG + H+DVGGGL Sbjct: 181 VYRHAASLPNLEIKGIDCHIGSQLTEIAPFVDALDKLLVLIDELAENGITLAHLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P ++ + G ++I EPGR ++A+ G+L+TKV +K+ A+K Sbjct: 241 GVTYKDETPPHPDEYTQAIAQRMQGREDLQLIFEPGRAIMANAGVLLTKVEFLKQGAEKN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + R D+VGPICETGDFI R++A Sbjct: 301 FAIVDAAMNDLIRPALYSAWQ-SIIPLDTSLTRDSAVYDVVGPICETGDFIGKERELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L + GAYG V + YNSR EIMV+ Q ++R R T ++L +S+ Sbjct: 359 DAGDYLAVRSAGAYGFVMASNYNSRCKAAEIMVDKDQVMVVRERETLEDLWRGESV 414 >gi|126730019|ref|ZP_01745831.1| diaminopimelate decarboxylase [Sagittula stellata E-37] gi|126709399|gb|EBA08453.1| diaminopimelate decarboxylase [Sagittula stellata E-37] Length = 426 Score = 309 bits (791), Expect = 6e-82, Method: Composition-based stats. Identities = 201/420 (47%), Positives = 279/420 (66%), Gaps = 1/420 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 F Y +G L AE+VS+ ++A V+TPFY YS + +++ F A MVCYA+KA Sbjct: 7 DHFLYRDGQLFAEDVSVAEIARAVETPFYLYSHATLVRHFRLFDEALAWGPHMVCYAVKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 SNQA++ LA G+G+D+VS GE RA AA VP RIVFSGVGKT EI AL GI Sbjct: 67 ASNQAILTALAAEGAGMDVVSGGEYARAKAAGVPGARIVFSGVGKTRSEIRAALDGGIRQ 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVESE E++ +++ A S+G APIA RVNPD++A TH KI+TGK E+KFGIPI + + Sbjct: 127 FNVESEPEMQVISEVATSMGVVAPIAVRVNPDVDAKTHAKIATGKSENKFGIPIARAREV 186 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 YA A+ LPG+K+ G+D+HIGSQ+ Q+E F A++ + +LT+ LR+ GH I+ +D+GGGLG Sbjct: 187 YAEAAALPGLKVVGIDVHIGSQLTQLEPFEMAYRKVAELTEVLRAEGHAIERLDLGGGLG 246 Query: 242 IAY-HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 I Y S+ PP +DY +++ + G+L ++ +EPGR + + GILV++VI +K + Sbjct: 247 IPYARSNEAPPLPTDYGAMVQRTVGHLGVEVEIEPGRLIAGNAGILVSRVIYVKNGEGRD 306 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+ILD AMND +RP +YDAYH+I + + D+VGP+CETGD A R + Sbjct: 307 FLILDAAMNDLIRPAMYDAYHDIVPVAEAEPGIEQVAYDVVGPVCETGDTFAKGRVMPPL 366 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 GDL+ GAYGAV S YN+R L+PEIM QF +IR R +F ++I D++P WL Sbjct: 367 AAGDLVAFRSAGAYGAVMSSEYNTRPLVPEIMAKNDQFAVIRARPSFDDMINRDTVPEWL 426 >gi|253997642|ref|YP_003049706.1| diaminopimelate decarboxylase [Methylotenera mobilis JLW8] gi|253984321|gb|ACT49179.1| diaminopimelate decarboxylase [Methylotenera mobilis JLW8] Length = 416 Score = 309 bits (791), Expect = 6e-82, Method: Composition-based stats. Identities = 181/419 (43%), Positives = 257/419 (61%), Gaps = 5/419 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F LHAENV+L ++ +P Y YS A+ + + FS F + +VC+A+K Sbjct: 1 MNTFTLKNNVLHAENVALTQITENFGSPCYVYSKAALSQAFERFSAGFKDANHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N + A++ A LG+G DIVS GEL R +AA +++VFSGVGKT +E+ AL++GI+ Sbjct: 61 SNPSLAILNLFAKLGAGFDIVSGGELARVIAAGGDPKKVVFSGVGKTAEEMRAALEAGIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SEL LN A +GK AP++ RVNP+++A TH ISTG K +KFG+ Sbjct: 121 CFNVESASELIRLNDVAAYMGKIAPVSLRVNPNVDAKTHPYISTGLKNNKFGVAYEDALD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ + + I GVD HIGSQI ++ F AF + L L N IQHID+GGG+ Sbjct: 181 IYLQAAEMSNIAIHGVDCHIGSQITELSPFLDAFDRVLALVDALAENNIQIQHIDLGGGI 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP + YA + + GN K++ EPGR LV + G+L+TKV +K + K Sbjct: 241 GICYSDE-TPPEFTAYAKAMREKLGNRDVKLVFEPGRALVGNAGVLLTKVEYLKPTESKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND MRP LYDAYH+I + + ++ +IVGP+CE+GDF+ +R +A Sbjct: 300 FAIVDAAMNDLMRPALYDAYHDIQAVA--PRNEAAVNYEIVGPVCESGDFLGHDRNLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL I GAYG S YN+R E+MV+G Q H+I+ R +L + ++P Sbjct: 357 QEGDLLAIMSAGAYGMSMSSNYNTRPRAAEVMVDGDQCHLIKKRELIADLFANESTVPN 415 >gi|254226601|ref|ZP_04920182.1| diaminopimelate decarboxylase [Vibrio cholerae V51] gi|125620873|gb|EAZ49226.1| diaminopimelate decarboxylase [Vibrio cholerae V51] Length = 417 Score = 309 bits (791), Expect = 6e-82, Method: Composition-based stats. Identities = 179/420 (42%), Positives = 255/420 (60%), Gaps = 5/420 (1%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L AE V L LA+ TP Y YS +E+++ F + ++CYA+ Sbjct: 1 MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGEYPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R LAA ++VFSGVGKT E+ ALQ I Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG KAPI+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAQTHPYISTGLRDNKFGITFDRAA 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A +LP + + G+D HIGSQ+ + F A L L L++ G +I+H+DVGGG Sbjct: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLLTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RP LY A+ +I + G+ D+VGP+CET DF+ +R + + Sbjct: 301 NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEA--QTYDLVGPVCETSDFLGKDRDL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + +GAYG S YN+R + E+MV+G++ +++R R L L+ +P Sbjct: 358 LQEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLPE 417 >gi|332304598|ref|YP_004432449.1| diaminopimelate decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171927|gb|AEE21181.1| diaminopimelate decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 415 Score = 309 bits (791), Expect = 7e-82, Method: Composition-based stats. Identities = 184/415 (44%), Positives = 251/415 (60%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L+AE+VSL +A TP Y YS IE+++L F A +VCYA+K Sbjct: 1 MDFFGYKNEKLYAEDVSLHDIAQTHGTPCYVYSKATIERHWLAFDKAAGAHPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LGSG DIVS GEL R + A ++VFSGVGKT +EI L L+ I Sbjct: 61 ANSNLGVLSVLAKLGSGFDIVSGGELLRVIKAGGDPSKVVFSGVGKTPEEIALGLKHNIK 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ ++Q AV+ K API+ RVNPD++A TH ISTG K +KFGI Q Sbjct: 121 CFNVESPAELERISQVAVAENKIAPISIRVNPDVDAKTHPYISTGLKANKFGIEREQAVE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y +A++LP ++I G+D HIGSQ+ +I F A L L +L NG + H+DVGGGL Sbjct: 181 VYRHAASLPNLEIKGIDCHIGSQLTEIAPFVDALDKLLVLIDELAENGITLAHLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P ++ + G ++I EPGR ++A+ G+L+TKV +K+ A+K Sbjct: 241 GVTYKDETPPHPDEYTQAIAQRMQGREDLQLIFEPGRAIMANAGVLLTKVEFLKQGAEKN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ ++ + R D+VGPICETGDFI R++A Sbjct: 301 FAIVDAAMNDLIRPALYSAWQ-SIIPLDTSLTRDSAVYDVVGPICETGDFIGKERELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD L + GAYG V + YNSR EIMV+ ++R R T ++L +S Sbjct: 359 EAGDYLAVRSAGAYGFVMASNYNSRCKAAEIMVDKENVIVVRERETLEDLWRGES 413 >gi|325982948|ref|YP_004295350.1| diaminopimelate decarboxylase [Nitrosomonas sp. AL212] gi|325532467|gb|ADZ27188.1| diaminopimelate decarboxylase [Nitrosomonas sp. AL212] Length = 417 Score = 309 bits (791), Expect = 7e-82, Method: Composition-based stats. Identities = 183/413 (44%), Positives = 253/413 (61%), Gaps = 4/413 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y + L E+V L+++A TP Y YS +A+ K Y F AF D ++C+A+KAN Sbjct: 6 EFIYHDDELFVESVPLKQIAEKFGTPCYVYSRSALTKAYQAFDTAFANRDHLICFAVKAN 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN A++ A LGSG DIVS GEL+R + A + VFSGVGK+ E+ +AL+ I CF Sbjct: 66 SNIAILNLFAQLGSGFDIVSGGELQRVIKAGGDPGKTVFSGVGKSRYEMRMALEVNILCF 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL LN+ A + K AP++ R+NPD++A TH ISTG KE+KFGIP + +Y Sbjct: 126 NVESEAELIALNRIAKDMDKLAPVSLRINPDVDAKTHPYISTGLKENKFGIPAREAERIY 185 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A P ++ G+D HIGSQ+ ++E F +A K + L L++ I+H+D+GGGLGI Sbjct: 186 KSAHLYPNIRFIGLDCHIGSQLTELEPFMQASKKMLHLLDSLQAQNLEIEHLDLGGGLGI 245 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y+ + PS SDY S + ++ ++++EPGR LV + GIL+T++ +K + + F Sbjct: 246 RYNDE-ILPSISDYVSALCINTHQIKQRLLIEPGRSLVGNAGILLTRIEYLKHTPARNFA 304 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D AMND MRP LYDAYHEI + IVGP+CETGDF+ +R+I L Sbjct: 305 IVDAAMNDLMRPALYDAYHEILPV--HKNSGEIKDYQIVGPVCETGDFLGHDRRIGLID- 361 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 G+LL I GAYG S YNSR EIMV+ HIIR R T +L + Sbjct: 362 GNLLAIMSAGAYGMSMSSNYNSRPRAAEIMVDKDTTHIIRQRETIDQLFANEK 414 >gi|91791757|ref|YP_561408.1| diaminopimelate decarboxylase [Shewanella denitrificans OS217] gi|91713759|gb|ABE53685.1| diaminopimelate decarboxylase [Shewanella denitrificans OS217] Length = 414 Score = 309 bits (790), Expect = 7e-82, Method: Composition-based stats. Identities = 183/416 (43%), Positives = 265/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +L AE+ S+ ++A TP Y YS +E+++ F +A ++CYA+K Sbjct: 1 MDHFIYQDQNLFAESCSVAEIAQQHGTPVYIYSRATLERHWRAFDDAVGTHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R + A +++VFSGVGKT++E+ AL+ GIY Sbjct: 61 ANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPKKVVFSGVGKTVEEMQQALELGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A SL KAP++ R+NPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESSAELEQLNLVAQSLNTKAPVSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++ A+ L + + GVD HIGSQ+ +++ F A L L +L + G + H+DVGGGL Sbjct: 181 VFVRAAALSHIDVKGVDCHIGSQLTELKPFLDAMDRLLGLVDRLTALGIELSHLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP+ YA+ + + G + +I EPGR + A+ GI VT+V+ +K++++K Sbjct: 241 GVPY-DNETPPAPQVYAAALVERLGERKLTLIFEPGRAIAANAGIFVTQVLYLKENSNKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ +I + D DIVGP+CETGDF+ +R++A+ Sbjct: 300 FAIVDGAMNDLLRPALYSAWQKIIPVQQ--SDAATQAFDIVGPVCETGDFLGKDRQLAVV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL I GAYG S YNSR + EIMV+GSQ ++R R Q+L + + + Sbjct: 358 -AGDLLAIRSCGAYGFAMSSNYNSRPRVAEIMVDGSQAFVVREREKRQQLWQGEQL 412 >gi|240947851|ref|ZP_04752291.1| Diaminopimelate decarboxylase [Actinobacillus minor NM305] gi|240297813|gb|EER48249.1| Diaminopimelate decarboxylase [Actinobacillus minor NM305] Length = 416 Score = 309 bits (790), Expect = 8e-82, Method: Composition-based stats. Identities = 186/418 (44%), Positives = 266/418 (63%), Gaps = 3/418 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L AE++++ + TP Y YS +E+++ F NAF ++C+A+K Sbjct: 1 MNHFEYKNQQLFAEDIAVSDIVKEHGTPAYIYSRATLERHWHAFDNAFGDHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNIMARLGSGFDIVSQGELERVLAAGGDPSKVVFSGVAKSHAEIARALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SEL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNVESISELHRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVQQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP VKI+G+D HIGSQ+ +++ F A L L +QL+ +G + H+D+GGGL Sbjct: 181 VYRLASHLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGIRLHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ YH + P + +L+ + +IILEPGR + A+ GILVTKV +K + D+ Sbjct: 241 GVPYHGEEPPHPTEYAKALLEKLKDYQDLEIILEPGRAITANAGILVTKVEYLKTNEDRR 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY E+ + R D+VGPICET DF+ R++A Sbjct: 301 FAIVDTGMNDMIRPALYEAYMELTEVDRSLS-REKAVYDVVGPICETSDFLGKQRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 GDL+ + GAYGA S TYNSR EIMV+ + +++I+ R +F++L L+ +P Sbjct: 359 AEGDLIAMRSAGAYGATMSSTYNSRPQAVEIMVDSANYYLIKARASFEDLWRLEKCLP 416 >gi|301057683|ref|ZP_07198758.1| diaminopimelate decarboxylase [delta proteobacterium NaphS2] gi|300448229|gb|EFK11919.1| diaminopimelate decarboxylase [delta proteobacterium NaphS2] Length = 420 Score = 309 bits (790), Expect = 8e-82, Method: Composition-based stats. Identities = 190/420 (45%), Positives = 261/420 (62%), Gaps = 3/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y E L+ E+V + +A V TP Y YS +++++ F AF + + CY++K Sbjct: 1 MHHFHYKENELYCEDVPISAIAAKVGTPAYVYSHATLKQHFDAFDGAFGDVKHLTCYSMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN+A++ A G G+DIVS GEL RAL A V RIVFSGVGK++ +++ A+ S I Sbjct: 61 SNSNKALLALFAGRGGGVDIVSGGELYRALNAGVDPSRIVFSGVGKSLSDLEYAVSSDIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL LNQ A G+KA I+ RVNPD++ TH ISTG KE+KFGI + + Sbjct: 121 MFNVESPQELLKLNQVAREKGRKARISIRVNPDVDPKTHPYISTGLKENKFGIGVEEAIR 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A+TL GV++ GV HIGSQ+ + F A K L++L +L I+++D+GGGL Sbjct: 181 QYEKATTLKGVEVVGVSCHIGSQLTRTSPFVDALKKLKELIARLEKMNIAIRYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP YA I + + +ILEPGR +V + GILV KV+ K S +K Sbjct: 241 GITY-DNEVPPHPKQYAQDIKRELASSDWTLILEPGRVIVGNAGILVAKVLYAKTSHEKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND MRP+LY AYH I + G+RL AD+VGPICE+GDF+A +R I Sbjct: 300 FFVVDAAMNDLMRPSLYGAYHGIQPVKKTPGERLK--ADVVGPICESGDFLAKDRLIETL 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 DL+ + GAYG S TYNSR + E+MV+ +F +IR R TF +L+ +SIP +L Sbjct: 358 TSEDLIAVMSAGAYGFSMSSTYNSRPRVCEVMVSEDRFEVIRERETFADLVRGESIPRFL 417 >gi|327483026|gb|AEA77433.1| Diaminopimelate decarboxylase [Vibrio cholerae LMA3894-4] Length = 417 Score = 309 bits (790), Expect = 8e-82, Method: Composition-based stats. Identities = 180/420 (42%), Positives = 254/420 (60%), Gaps = 5/420 (1%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L AE V L LA+ TP Y YS +E+++ F + ++CYA+ Sbjct: 1 MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R LAA ++VFSGVGKT E+ ALQ I Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL LN+ A LG KAPI+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELLRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A +LP + + G+D HIGSQ+ + F A L L L++ G +I+H+DVGGG Sbjct: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+LVTKV +K + K Sbjct: 241 LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RP LY A+ +I + G+ D+VGP+CET DF+ +R + + Sbjct: 301 NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEA--QTYDLVGPVCETSDFLGKDRDL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 + GDLL + +GAYG S YN+R + E+MV+G++ +++R R L L+ +P Sbjct: 358 LQEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLPE 417 >gi|319407825|emb|CBI81478.1| Diaminopimelate decarboxylase [Bartonella sp. 1-1C] Length = 423 Score = 309 bits (790), Expect = 8e-82, Method: Composition-based stats. Identities = 225/423 (53%), Positives = 299/423 (70%), Gaps = 2/423 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y++G LHAEN+SL LA V TPFYCYS + N+ + AF M +++ YA+K Sbjct: 1 MHFFSYYQGELHAENLSLSILAQKVGTPFYCYSARTLITNFENYQQAFQDMPSLIAYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQA+++ LA G+G D+VSEGELRRALAA +PA RI++SGVGKT+ EID AL I+ Sbjct: 61 ANSNQAILRLLARSGAGADVVSEGELRRALAAGIPAHRIIYSGVGKTVKEIDFALTQNIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RA +L API+ R+NPD++A THKKI+TGK E+KFGIP+ Sbjct: 121 CFNVESEPELEQLSARAAALSTTAPISLRINPDVDAKTHKKITTGKSENKFGIPLSSARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LP + I GVD+HIGSQI ++ F AF + D +QL ++G+ I H+D+GGGL Sbjct: 181 VYKKAAQLPSLYICGVDIHIGSQICDLKPFEDAFLITADFVRQLWNDGYTITHVDIGGGL 240 Query: 241 GIAYHSDHR-PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y S+H PS DYA+L+ ++ L IILEPGR +V + GILVT VI +K+ ++ Sbjct: 241 GIPYGSEHHSVPSPFDYAALVRKHIAPLGINIILEPGRSIVGEAGILVTSVIHLKRGKER 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMNDF+RPTLY+A+ +V D I+ADIVGP+CETGD++ LNR + L Sbjct: 301 NFVIVDAAMNDFIRPTLYEAWQ-NVLLVKEKIDTPLINADIVGPVCETGDYLGLNRSLPL 359 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDLL + GAYGAV S TYNSRLLIPE++V ++ IIRPR+ + +LI LD IP W Sbjct: 360 LSKGDLLVVTGAGAYGAVMSNTYNSRLLIPEVLVQDMRYAIIRPRLDYAQLIGLDQIPDW 419 Query: 420 LQK 422 ++ Sbjct: 420 IEN 422 >gi|261210168|ref|ZP_05924465.1| diaminopimelate decarboxylase [Vibrio sp. RC341] gi|260840708|gb|EEX67257.1| diaminopimelate decarboxylase [Vibrio sp. RC341] Length = 417 Score = 309 bits (790), Expect = 9e-82, Method: Composition-based stats. Identities = 180/420 (42%), Positives = 253/420 (60%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE V L LA+ TP Y YS +E+++ F + ++CYA+ Sbjct: 1 MDYFNYQDDGQLWAEQVPLADLANQYGTPLYIYSRATLERHWHAFDKSVGDYPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R LAA ++VFSGVGKT E+ ALQ I Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL LN+ A LG KAPI+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELHRLNKVAAELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A +LP + + G+D HIGSQ+ + F A L L L++ G +I+H+DVGGG Sbjct: 181 EVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAQGIHIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ G+LVTKV +K + K Sbjct: 241 LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RP LY A+ +I + G+ D+VGP+CET DF+ +R + + Sbjct: 301 NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEA--QTYDLVGPVCETSDFLGKDRDL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 GDLL + +GAYG S YN+R + E+MV+G++ +++R R L L+ +P Sbjct: 358 LEEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLPE 417 >gi|217979913|ref|YP_002364060.1| diaminopimelate decarboxylase [Methylocella silvestris BL2] gi|217505289|gb|ACK52698.1| diaminopimelate decarboxylase [Methylocella silvestris BL2] Length = 422 Score = 309 bits (790), Expect = 9e-82, Method: Composition-based stats. Identities = 234/423 (55%), Positives = 303/423 (71%), Gaps = 3/423 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+ G L+AENV L LA V TPFYCYS+ + ++Y F +A +G+D++VCYA+K Sbjct: 1 MHHFESENGVLYAENVDLAALADDVGTPFYCYSSATLSRHYRVFKSALEGIDSLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ TLA LG+G+D+VSEGELRRALAA PA +I FSGVGKT E+ AL++GI+ Sbjct: 61 ANSNQAVLTTLARLGAGMDVVSEGELRRALAAGAPASQITFSGVGKTKQEMAFALKAGIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL L++ A ++G A IA RVNPD++A TH KISTGK E+KFG+PI + Sbjct: 121 CFNVESEPELLALSEVASAIGSTARIAIRVNPDVDAKTHAKISTGKSENKFGVPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG-- 238 +YA A LP +K+SGVD+HIGSQI +E F +FKL LR++GH+I H+DVGG Sbjct: 181 VYAEAGRLPNIKVSGVDLHIGSQITDLEPFDASFKLAAGFVATLRADGHDIDHVDVGGGL 240 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 G+ D YA ++ G L+C+I+ EPGR +V + GILVT+V+ +K+ Sbjct: 241 GIPYREGDDPASYHPDRYARILRARLGPLECRIVCEPGRLIVGNAGILVTRVLYLKRGEA 300 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 KTFVI+D AMND +RPTLYDAYHE V P D I AD+VGP+CETGD++AL RK+A Sbjct: 301 KTFVIVDAAMNDLIRPTLYDAYHE-IRPVRPRADAPEILADVVGPVCETGDYLALGRKMA 359 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 P+PGDLL I GAYGA QS TYNSRLLIPE++VNG+ + ++RPR + ELI LD +PA Sbjct: 360 APQPGDLLAIMSAGAYGATQSSTYNSRLLIPEVLVNGAAYAVVRPRPAYDELIGLDKLPA 419 Query: 419 WLQ 421 WL+ Sbjct: 420 WLR 422 >gi|307262007|ref|ZP_07543662.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868290|gb|EFN00112.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 416 Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 263/416 (63%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE+VS+ + + TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MNHFNYKNQQLFAEDVSVSDIINQHGTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ + LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMVRLGSGFDIVSQGELERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL +N+ A GK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNIESIAELHRINEVAGQSGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A TLP VKI+G+D HIGSQ+ +++ F A L L +QL+ +G + H+D+GGGL Sbjct: 181 VYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P + +L+ + G +IILEPGR + A+ GILVTKV +K + D+ Sbjct: 241 GVPYNGEEPPHPTEYAKALLEKLKGYADLEIILEPGRAITANAGILVTKVEYLKANEDRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY V+ + R D+VGPICET DF+ +R++A Sbjct: 301 FAIVDTGMNDMIRPALYEAYM-QITEVDQSLSREKAVYDVVGPICETSDFLGKDRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + GAYGA S TYNSR EIMV+G Q ++I+ R +F +L L+ + Sbjct: 359 EQGDLIAMRSAGAYGAAMSSTYNSRPQAVEIMVDGDQAYLIKARASFADLWRLEKL 414 >gi|149178525|ref|ZP_01857113.1| diaminopimelate decarboxylase [Planctomyces maris DSM 8797] gi|148842640|gb|EDL57015.1| diaminopimelate decarboxylase [Planctomyces maris DSM 8797] Length = 423 Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats. Identities = 160/423 (37%), Positives = 241/423 (56%), Gaps = 9/423 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MSAF Y L ENV + +LA TP + YS + +AF +D ++CY++K Sbjct: 1 MSAFHYQNDELFCENVPVAQLAEEFGTPLWVYSKSDFLGRLKEIQDAFAEVDPVICYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN N +++KT+ GS D+VS GEL R A R+VF+GVGKT +EI AL++ I Sbjct: 61 ANGNLSILKTMNDAGSSFDVVSGGELFRVQQAGADTSRVVFAGVGKTDEEIRQALKADIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F+VESE+EL + + A L +A R+NPDI+A TH K +TGKK +KFG+ I + Sbjct: 121 MFDVESEAELDAIARIAGELNCVGRVALRLNPDIDAKTHHKTTTGKKGNKFGMDIERATE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L ++++G+ MH+GS I + + KA K ++ QLR GHN +++GGG Sbjct: 181 LADKVLKDEHLELTGIHMHLGSPILSTDPYAKAVKKGAEVISQLREKGHNTNWLNLGGGF 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI+Y PS+ YA +I + C++ LEPGRF+ + G+L+++++ K+ K Sbjct: 241 GISY-KTDEGPSAQTYADVIVPTIKEIGCRLALEPGRFIAGNSGVLISQIVFTKREGGKL 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH--------IHADIVGPICETGDFIA 352 F I D M D +RP +YD+YH + + AD+VGP+CE+ D+ A Sbjct: 300 FYIQDGGMTDLVRPAMYDSYHRVWPVKPKVPMPFDCEGEIEGCEPADVVGPVCESCDYFA 359 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 +R + + GD L + GAYG+V S YN+R EI+V+GS+ +IR R T++ELI Sbjct: 360 KDRYLPPMQRGDYLCMFSAGAYGSVMSSNYNARPRSAEILVDGSENQVIRRRETYEELIA 419 Query: 413 LDS 415 L+ Sbjct: 420 LEQ 422 >gi|307257594|ref|ZP_07539354.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863897|gb|EFM95820.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 416 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 264/416 (63%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE+VS+ + + TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MNHFNYKNQQLFAEDVSVSDIINQHGTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ + LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMVRLGSGFDIVSQGELERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + Q Sbjct: 121 CFNIESIAELHRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A TLP VKI+G+D HIGSQ+ +++ F A L L +QL+ +G + H+D+GGGL Sbjct: 181 VYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P + +L+ + G +IILEPGR + A+ GILVTKV +K + D+ Sbjct: 241 GVPYNGEEPPHPTEYAKALLEKLKGYADLEIILEPGRAITANAGILVTKVEYLKANEDRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY V+ + R D+VGPICET DF+ +R++A Sbjct: 301 FAIVDTGMNDMIRPALYEAYM-QITEVDQSLSREKAVYDVVGPICETSDFLGKDRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + GAYGA S TYNSR EIMV+G Q ++I+ R +F +L L+ + Sbjct: 359 EQGDLIAMRSAGAYGAAMSSTYNSRPQAVEIMVDGDQAYLIKARASFADLWRLEKL 414 >gi|254788013|ref|YP_003075442.1| diaminopimelate decarboxylase [Teredinibacter turnerae T7901] gi|237687153|gb|ACR14417.1| diaminopimelate decarboxylase [Teredinibacter turnerae T7901] Length = 421 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 180/416 (43%), Positives = 265/416 (63%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y + L E +L +A TP Y YS +IE++Y +++A M+CYA+K Sbjct: 1 MAHFSYNDNQLTVEGCTLSAIADTYDTPCYVYSRASIEQSYQAYASALGAHPGMICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANS+ AV++ LA G+G DIVS+GEL+R LAA A+R++FSGVGK +E+ ALQ I Sbjct: 61 ANSSLAVLQVLAQQGAGFDIVSQGELQRVLAAGGSADRVIFSGVGKKAEEMRFALQQQIA 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+TL Q A ++G A ++ RVNPD++ANTH ISTG KE+KFG+ I Sbjct: 121 CFNVESAAELETLAQVAQAMGTTARVSLRVNPDVDANTHPYISTGLKENKFGVDIQTALD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A++L G+ + G+D HIGSQ+ Q+ F A + L QL G I+H+D+GGGL Sbjct: 181 VYRRAASLDGIDVVGIDCHIGSQLTQLAPFMDALDRVLALMDQLAEEGITIRHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + +PPS +DY + G+ ++ EPGR +VA+ G+L+T+V+ +K + K Sbjct: 241 GVTYN-NEQPPSPADYVGQVIAKLGDRAVALMFEPGRSIVANAGVLLTRVLYLKPTEHKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP+LY A+ + ++ P D+VGP+CETGD++A +R +A Sbjct: 300 FAIIDAAMNDNIRPSLYQAWQRVLPVIAPEESEPTQQWDLVGPVCETGDWLAKDRALA-L 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 G +L + +GAYG S YNSR EIMV+G + H+IR R TF +L+ + + Sbjct: 359 HEGSVLALMSSGAYGFTMSSNYNSRTRAAEIMVDGDKHHLIRARETFADLVRGEQL 414 >gi|197336405|ref|YP_002157271.1| diaminopimelate decarboxylase [Vibrio fischeri MJ11] gi|197317895|gb|ACH67342.1| diaminopimelate decarboxylase [Vibrio fischeri MJ11] Length = 417 Score = 308 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 188/417 (45%), Positives = 257/417 (61%), Gaps = 4/417 (0%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE + + +LA TP Y YS +E+++ F N+ +VCYA+ Sbjct: 1 MDYFNYKDDGQLWAEELPITQLAEQFGTPLYVYSRATLERHWKAFDNSVGNHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS+GEL R +AA ++VFSGVGKT DE+ AL+ I Sbjct: 61 KANSNIGVLNALARLGSGFDIVSQGELERVVAAGGDPTKVVFSGVGKTADEMRRALELKI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN A +G API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNAVAAEMGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y +A +LP + + G+D HIGSQ+ IE F A L L L++ G NI+H+DVGGG Sbjct: 181 EVYKFAQSLPNLDVQGIDCHIGSQLTDIEPFIDATDRLLALIDDLKAQGVNIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ GILVTKV +K + K Sbjct: 241 LGVVYRDELPPQPSEYATALLGRLAEHQDLELIFEPGRAIAANAGILVTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I +V GD + D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVVPHEGDA--QNYDLVGPICETGDFLGKDRAL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 DLL + +GAYG V S YN+R EIMV+G H++R R L EL++I Sbjct: 358 LEANDLLAVRSSGAYGFVMSSNYNTRCRAAEIMVDGGDAHLVRKREELSSLWELEAI 414 >gi|218778271|ref|YP_002429589.1| diaminopimelate decarboxylase [Desulfatibacillum alkenivorans AK-01] gi|218759655|gb|ACL02121.1| diaminopimelate decarboxylase [Desulfatibacillum alkenivorans AK-01] Length = 417 Score = 308 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 184/420 (43%), Positives = 266/420 (63%), Gaps = 3/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y +L+ E+V + +A + TP + YS + +++ F AF +D ++CY+ K Sbjct: 1 MHHFQYQNNALYCEDVPVADIAANLGTPLFIYSHATLTRHFQAFDKAFGDVDHIICYSAK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N A++K A +G+GLD+VS GEL R L A +PA +I ++GVGKT DEIDLAL SGI Sbjct: 61 ANTNGAILKMFADMGTGLDVVSGGELHRGLKAGIPANKIAYAGVGKTQDEIDLALNSGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ +N RA +LGKKAPI+ RVNP+++A TH ISTG K++KFGI + Sbjct: 121 MFNVESFEELQAINARAKALGKKAPISLRVNPNVDAKTHPYISTGMKKNKFGIAKEAVVE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A L ++ G+D HIGSQI Q+ F +A + ++ L +L+ G I ++DVGGGL Sbjct: 181 AYKAAHELDSTEVVGIDFHIGSQITQVGPFVEAMESVKSLAAELKGMGIGINYLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + P +YA I + + ++LEPGR +V + GI+VT+ + +K+ A K Sbjct: 241 GINYDDEEPP-EPDEYAKAICKVIADFPITVVLEPGRAMVGNAGIMVTRFLYLKEGATKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I+D MND +RP++Y A+H I + GD L D+VGPICE+ DF+A +R+I Sbjct: 300 FIIVDAGMNDLIRPSIYGAFHLIQPVNKREGDPLTG--DVVGPICESTDFLAKDREIGAV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 PGDLL + GAYG S YNSR E+MV G+ F +IR R +++L + IP +L Sbjct: 358 VPGDLLAVMSAGAYGFAMSSNYNSRPRACEVMVKGNAFEVIRQRENYEDLTRGEVIPTFL 417 >gi|59713092|ref|YP_205868.1| diaminopimelate decarboxylase, PLP-binding [Vibrio fischeri ES114] gi|59481193|gb|AAW86980.1| diaminopimelate decarboxylase, PLP-binding [Vibrio fischeri ES114] Length = 417 Score = 308 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 188/417 (45%), Positives = 256/417 (61%), Gaps = 4/417 (0%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE + + +LA TP Y YS +E+++ F N+ +VCYA+ Sbjct: 1 MDYFNYKDDGQLWAEELPITQLAEQFGTPLYVYSRATLERHWKAFDNSVGNHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS+GEL R +AA ++VFSGVGKT DE+ AL+ I Sbjct: 61 KANSNIGVLNALARLGSGFDIVSQGELERVVAAGGDPTKVVFSGVGKTADEMRRALELKI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN A +G API+ R+NPD++A TH ISTG +++KFGI Sbjct: 121 KCFNVESEPELERLNAVAAEMGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDHAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y +A +LP + + G+D HIGSQ+ IE F A L L L++ G NI+H+DVGGG Sbjct: 181 EVYKFAQSLPNLDVQGIDCHIGSQLTDIEPFIDATDRLLALIDDLKAQGVNIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + ++I EPGR + A+ GILVTKV +K + K Sbjct: 241 LGVVYRDELPPQPSEYATALLGRLAEHQDLELIFEPGRAIAANAGILVTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I +V GD + D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVVPREGDA--QNYDLVGPICETGDFLGKDRAL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 DLL + +GAYG V S YN+R EIMV+G H++R R L EL++I Sbjct: 358 LEANDLLAVRSSGAYGFVMSSNYNTRCRAAEIMVDGGDVHLVRKREELSSLWELEAI 414 >gi|319899468|ref|YP_004159565.1| Diaminopimelate decarboxylase [Bartonella clarridgeiae 73] gi|319403436|emb|CBI77004.1| Diaminopimelate decarboxylase [Bartonella clarridgeiae 73] Length = 424 Score = 308 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 221/423 (52%), Positives = 301/423 (71%), Gaps = 1/423 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE++S+ LA + TPFYCYS A+ N+ + NAF M ++ YA+K Sbjct: 1 MHFFSYHQGELHAEDLSISTLAQDIGTPFYCYSARALITNFENYQNAFRDMPYLIAYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQA+++ LA G+G DIVSEGELRRAL+A +PA +IV+SGVGKTI EID AL I Sbjct: 61 ANSNQAILRLLARSGAGADIVSEGELRRALSAGIPAHKIVYSGVGKTIKEIDFALAQDIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+L A I+ R+NPD++A THKKI+TGK E+KFGIP+ Sbjct: 121 CFNVESEPELEQLSARAVALSTTARISLRINPDVDAKTHKKITTGKSENKFGIPLSSARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LPG+ + GVD+HIGSQI ++ F AF + D +QL +G I H+D+GGGL Sbjct: 181 VYKKAAQLPGLYVCGVDIHIGSQICNLKPFENAFIITADFVRQLWGDGCAITHVDIGGGL 240 Query: 241 GIAYHSDHRP-PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI+Y ++H PS DYA+L+ ++ L IILEPGR +V + GILVT VI++K+ ++ Sbjct: 241 GISYGAEHYSLPSPFDYAALVRKHIAPLGINIILEPGRSIVGEAGILVTSVINLKRGKER 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMNDF+RPTLY+A+ + + D L I+AD+VGPICETGD++ LNR + + Sbjct: 301 NFFIVDAAMNDFIRPTLYEAWQNVLLVKEAPMDALLINADVVGPICETGDYLGLNRSLPI 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDLL + GAYGAV S TYNSRLLIPE++V G+++ ++RPR+ + +LI LD IP W Sbjct: 361 LSAGDLLAVTGAGAYGAVMSNTYNSRLLIPEVLVQGARYAVVRPRLDYAQLINLDRIPNW 420 Query: 420 LQK 422 ++ Sbjct: 421 IEN 423 >gi|293609896|ref|ZP_06692198.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828348|gb|EFF86711.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 416 Score = 308 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 192/416 (46%), Positives = 268/416 (64%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE S+E+LA TP Y YS A EK+YL AFD +D +C+A+K Sbjct: 1 MS-FTRINGVLHAEQCSMEQLAQQFGTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LG+G DIVS GEL R L A A ++VFSG+GKT +I+ +L GI Sbjct: 60 SNSNIAVLNVLAKLGAGFDIVSGGELARVLKAGGDASKVVFSGLGKTEADIETSLNVGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL L + A +GKKAPI+ RVNPD++A TH ISTG KE+KFGIP ++ Sbjct: 120 CFNVESYAELDRLQKVAARIGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYE 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++LP ++I G+D HIGSQ+ + + F A + + ++L+ G ++HID+GGGL Sbjct: 180 TYQYAASLPNLEIIGIDCHIGSQLTETKPFVDALDRVMLMIEELKKLGITLKHIDIGGGL 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PPS +YA+ + L K+ +EPGR + A+ G+L+TKV +K ++ + Sbjct: 240 GVCYKDE-TPPSVEEYANSMKPALEKLGLKVYMEPGRSISANAGVLLTKVDLLKPTSHRN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+ +I +V P+ D D+VG ICETGDFI +R +A Sbjct: 299 FAIIDAAMNDLIRPALYEAWMDIQPVV-PSSDTEEKTWDLVGAICETGDFIGKDRSLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + DLL + GAYG V S YN+R E+MV+G + H+IR R T + L E + + Sbjct: 357 KENDLLAVLGAGAYGFVMSSNYNTRGRAAEVMVSGDKAHLIRERETVESLWENERL 412 >gi|168704235|ref|ZP_02736512.1| diaminopimelate decarboxylase [Gemmata obscuriglobus UQM 2246] Length = 437 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 161/433 (37%), Positives = 242/433 (55%), Gaps = 20/433 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +L E+V + +LA TP Y YS A+ N AF + ++CY++K Sbjct: 1 MDHFDYRDRTLFCEDVPVPELAEKYGTPLYVYSEAALVANLNEVQTAFRDANPVICYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN N ++ + + GSG D+ S+GE +RAL A A ++VF+GVGKT EI+ AL++G++ Sbjct: 61 ANGNLSICRLMGQHGSGFDVTSQGEFQRALKAGPAAAKVVFAGVGKTDSEIEFALKNGVF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F+VESE EL + A LG KA +A RVNPD+ TH K T K KFG+ I I Sbjct: 121 LFDVESEQELHAIGAVAQKLGVKADVALRVNPDLPPKTHVKTDTSVKGVKFGLDIETIVD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + PG+ + G+ MH+GS I + + + + L +Q R+ GH+I+++++GGG Sbjct: 181 VAKGVVGHPGLSVVGLHMHLGSPILKADPYRMGAEKGLGLIKQFRAQGHDIKYLNMGGGF 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y D P+ S +A +I C++ILEPGRF+V + +L+++V+ K + K Sbjct: 241 GINYRKDEAKPA-SAFADVILPVVKESGCQLILEPGRFIVGNAAVLLSRVVFTKSTGGKH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAG-------------------DRLHIHADIV 341 +VI D AMND +RPTLY ++H I + AG D+V Sbjct: 300 YVIQDAAMNDLIRPTLYGSFHRIWPVAPAAGVPVTPDVNGDPDDPQPFREMPNCFKQDVV 359 Query: 342 GPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHII 401 GP+CE+GD++A +R + GDLL + GAYG S YNSR E++V+G +I Sbjct: 360 GPVCESGDYLAKDRPLPGLTRGDLLAVFSAGAYGMTMSSNYNSRCRAAEVLVSGRTHRLI 419 Query: 402 RPRMTFQELIELD 414 R R TF +L+ + Sbjct: 420 RRRETFADLVACE 432 >gi|46580057|ref|YP_010865.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|46449473|gb|AAS96124.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|311233943|gb|ADP86797.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris RCH1] Length = 412 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 176/414 (42%), Positives = 250/414 (60%), Gaps = 3/414 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y EGSL AE+VS+ LA TP Y YS +E++Y F +AF + C+++K Sbjct: 1 MHLFQYREGSLFAEDVSIIDLASTYGTPLYVYSAGTLERHYRAFDSAFGKAAHLTCFSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SN ++K L LG+G+DIVS GEL RAL A +P RIV+SGVGK DEI AL++ I Sbjct: 61 ACSNIHILKLLGSLGAGVDIVSGGELHRALLAGIPGRRIVYSGVGKRPDEIRSALEADIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+T+ + A S+G A ++ R+NPD++ +TH ISTG +++KFGI + Q Sbjct: 121 MFNVESLQELRTIEEVAASMGTTARVSLRINPDVDPHTHPYISTGLQKNKFGIEMTQALE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A LP + G+D HIGSQ+ + F +A + + + L G +I ++D+GGGL Sbjct: 181 GYMLARDLPHIDPIGIDCHIGSQLTSLSPFLEALDKVLEFREHLSILGLDISYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP D+ + + L ++LEPGR + + GILVT+V+ K + K Sbjct: 241 GITYGEE-TPPHPRDFGRAVLERTKGLNLTLVLEPGRVIAGNAGILVTEVLYTKTTPSKQ 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D AMND +RP+LY +YH I ++ R D+VGPICE+GDF+A +R + Sbjct: 300 FVIVDAAMNDLVRPSLYASYHRIAEVLPH--GRTEQTVDVVGPICESGDFLARDRVLPAV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 G+LL + GAYG S YNSR E++V G IR R T+ +L L+ Sbjct: 358 EQGELLAVFSAGAYGFSMSSQYNSRPRAAEVLVRGDTAKSIRRRETYDDLTALE 411 >gi|94265420|ref|ZP_01289172.1| Diaminopimelate decarboxylase [delta proteobacterium MLMS-1] gi|94266455|ref|ZP_01290148.1| Diaminopimelate decarboxylase [delta proteobacterium MLMS-1] gi|93452933|gb|EAT03438.1| Diaminopimelate decarboxylase [delta proteobacterium MLMS-1] gi|93454077|gb|EAT04412.1| Diaminopimelate decarboxylase [delta proteobacterium MLMS-1] Length = 416 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 192/418 (45%), Positives = 265/418 (63%), Gaps = 4/418 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y +G LHAE V++ ++A V TPFY YS + +++ F AF G+D + C+A+K Sbjct: 1 MHHFEYKDGVLHAEEVAVPEIAAAVGTPFYLYSAATLRRHFTAFDGAFAGLDHLSCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A+SN A+++ A LG G DIVS GEL RAL A + ERIV+SGVGKT EI AL +GI Sbjct: 61 ASSNIAILRLFARLGGGADIVSGGELFRALKAGIAPERIVYSGVGKTRAEIRQALVAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN+ES EL + Q A LG+ A ++FRVNPD++ TH ISTG E+KFGI I + + Sbjct: 121 MFNLESAQELTAIQQCAAELGQTARVSFRVNPDVDPQTHAYISTGLAENKFGIAIEEALA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A + V+I G+ HIGSQ+ Q+ F L+ +L G NI+++D+GGGL Sbjct: 181 VYKEARQMANVEIVGLSCHIGSQLTQVSPFVDTVDKLKKFMAELNGAGINIRYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP ++Y + Q G+L C +ILEPGR +V + GILVT+V+ K S K Sbjct: 241 GINYQGE-NPPEPAEYGMALRQALGDLPCTLILEPGRVIVGNAGILVTRVLFTK-SGRKN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV++D MND RP+LYDAYH I + + AD+VGPICETGDF+A R+IA Sbjct: 299 FVVVDAGMNDLARPSLYDAYHAIQPVTRREDG--QMVADVVGPICETGDFLARGREIARA 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 P DLL + GAYG + YNSR +PE++V+ QF IR R T+++L+ ++IP Sbjct: 357 VPDDLLAVMSAGAYGFTMASNYNSRPRVPEVLVSEDQFVEIRRRETYEDLVRGETIPD 414 >gi|49474787|ref|YP_032829.1| diaminopimelate decarboxylase [Bartonella quintana str. Toulouse] gi|49240291|emb|CAF26766.1| Diaminopimelate decarboxylase [Bartonella quintana str. Toulouse] Length = 424 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 216/422 (51%), Positives = 293/422 (69%), Gaps = 1/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE +SL LA V TPFYCYS A+ + + NAF M +++ YA+K Sbjct: 1 MRFFSYNQGVLHAEGLSLSALAQDVGTPFYCYSANALVTRFKDYQNAFRDMPSLIAYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++ LA G+G D+VSEGELRRALAA +PA IV+SGVGKT+ EID AL I Sbjct: 61 ANSNQAVLQLLAANGAGADVVSEGELRRALAAGIPAHCIVYSGVGKTVKEIDFALAHDIC 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+ K A I+ R+NPD++A THKKI+TGK E+KFGIP+ Sbjct: 121 CFNVESEPELEQLSARAVAFSKTARISLRINPDVDAKTHKKITTGKYENKFGIPLSLAWD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LPG+ + GVDMHIGSQI ++ F AF ++ D + L S+G+ + H+D+GGGL Sbjct: 181 VYKKAAQLPGIHVCGVDMHIGSQICDLKPFEDAFLIVADFVRHLSSSGYALTHVDIGGGL 240 Query: 241 GI-AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI H H PS DYA+L+ ++ L KII+EPGR ++ + G+LVT VI +K+ + Sbjct: 241 GIAYGHEQHSVPSLFDYAALVKRHIAPLGLKIIVEPGRSIIGEAGVLVTSVIYLKRGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV++D AMND +RPTLYDA+ + + D I ADIVG +CETGD++AL+R++ + Sbjct: 301 NFVVVDAAMNDLIRPTLYDAWQNVLLVKQAPEDASFIRADIVGSVCETGDYLALDRRVPI 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDLL I GAY AV + TYNSRLL+PE++V +++ IIRPR+ + +LI D IP W Sbjct: 361 LAAGDLLAITGAGAYSAVMASTYNSRLLVPEVLVQDTRYAIIRPRLDYAQLIGCDHIPDW 420 Query: 420 LQ 421 ++ Sbjct: 421 IE 422 >gi|258593057|emb|CBE69368.1| diaminopimelate decarboxylase [NC10 bacterium 'Dutch sediment'] Length = 418 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 182/419 (43%), Positives = 255/419 (60%), Gaps = 3/419 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y L E + +E++A V TPFY YS + ++ TF AF + +VC+A+K Sbjct: 1 MHHFQYRGDLLMCEELPIERIAAEVGTPFYLYSHATLTHHFQTFDQAFADIPHLVCFAIK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN A +K A LGSG D+VS GEL RA+ A +P RIVF+GVGKT +E+ AL+S I Sbjct: 61 ANSNGATLKLFADLGSGADVVSGGELYRAMRAGIPPSRIVFAGVGKTREEMGFALKSDIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ LN A ++G KA +A R+NPD++ TH ISTG K+ KFGI I Sbjct: 121 MFNVESPQELRLLNDVAGAMGTKARVALRINPDVDPKTHPYISTGLKKSKFGIDISLAME 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A L + + GV HIGSQI +I F + + L +LR +G IQ++DVGGGL Sbjct: 181 EYRVAKELRHIDVVGVHQHIGSQITEIAPFVDSLVKVAGLIAELRQHGFAIQYLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP +A + +L C I+LEPGR +V + G+LVTKV+ K++ K Sbjct: 241 GITYKDE-DPPVPRVFAEAMIAVIKDLGCTIVLEPGRVIVGNAGVLVTKVLYDKRTPAKH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+++D MND +RP+LY R + AD+VGP+CE+GDF+A +R + P Sbjct: 300 FIVVDAGMNDLVRPSLYG-SFHSILPARRQKGREEVMADVVGPVCESGDFLAKDRSMPAP 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS-IPA 418 PG+LL + GAYG S +YNSR +PEI+V G ++ IR R ++++LI + +P Sbjct: 359 EPGELLVVMSAGAYGYTMSSSYNSRPRLPEILVKGDRWFTIRERESYEDLIHGERALPE 417 >gi|114319371|ref|YP_741054.1| diaminopimelate decarboxylase [Alkalilimnicola ehrlichii MLHE-1] gi|114225765|gb|ABI55564.1| diaminopimelate decarboxylase [Alkalilimnicola ehrlichii MLHE-1] Length = 415 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 183/416 (43%), Positives = 251/416 (60%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF +G L AE V LE +A V TP Y YS AIE + F A VCYA+K Sbjct: 1 MQAFTLQDGRLCAEAVPLEDIAEQVGTPTYVYSKAAIESAWRGFDQALGDHPHQVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV++ LA LGSG DIVS GEL R LAA R+VFSGVGKT DE+ AL+ GI Sbjct: 61 ANSNLAVLQLLARLGSGFDIVSGGELERVLAAGGDPRRVVFSGVGKTADEMRRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL LN+ A L AP++ RVNPD++A TH ISTG +E+KFGI I + + Sbjct: 121 CFNVESTAELSRLNRVAGELRLTAPVSLRVNPDVDARTHPYISTGLRENKFGIDIREAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ + + GVD HIGSQ+ + A + + L +L + G I+H+DVGGGL Sbjct: 181 IYRQAANAAHLSVEGVDFHIGSQLTDLSPIADALERVLALVDRLAAEGITIRHLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP++ DYA ++ ++++EPGR +V + G+L+T+V +K +++ Sbjct: 241 GIRYRDE-TPPAAEDYARVLLDGLQGRDLELLMEPGRAVVGNAGVLITRVQYLKDGSEQR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP+LYD V P D + DIVGP+CETGDF+ R++A Sbjct: 300 FAVVDAAMNDLLRPSLYD-GWHAITPVRPRADTDTLPWDIVGPVCETGDFLGKQRELA-L 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG V + YN+R E++V G H++R R + L + + Sbjct: 358 AEGDLLAVHSAGAYGFVMASNYNTRPRPAEVLVAGGCHHLVREREPLRALWRGEHL 413 >gi|325294479|ref|YP_004280993.1| diaminopimelate decarboxylase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064927|gb|ADY72934.1| diaminopimelate decarboxylase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 420 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 179/411 (43%), Positives = 248/411 (60%), Gaps = 2/411 (0%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 Y G L + +S+E+LA TP Y YS +A+E + F +AF ++ + C+A+K+NSN Sbjct: 11 YENGKLKIDGISVEELARKYGTPLYVYSQSALEHWFKEFDSAFSSIEHITCFAVKSNSNI 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +V+K L LG+G D VS GE+ RAL A + ++IVF+GVGK IDEI+ L+ GI FNVE Sbjct: 71 SVLKVLKELGAGADTVSMGEIFRALTAGIDPKKIVFAGVGKRIDEIEYGLEKGILMFNVE 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 SESEL +N+ A LGK APIAFRVNPD+N TH ISTG K KFGI LY A Sbjct: 131 SESELYAINRVAEKLGKVAPIAFRVNPDVNPKTHPYISTGLKTSKFGIAYEGAIELYKKA 190 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 L + G+ HIGSQI + F +A + ++++ ++L S G I++ D GGGLGI+Y+ Sbjct: 191 KNLKNINPIGIHFHIGSQITDVSVFGEAARKIKEIVKELYSVGIEIEYFDAGGGLGISYN 250 Query: 246 SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + P + A I +L CK+ILEPGR L + GIL+++VI K+ +K F I+D Sbjct: 251 PNEPPVPARALADEIIPIIKDLGCKLILEPGRRLAGNAGILLSQVIYKKERHEKLFYIVD 310 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 MND RP+LY AYH I + AD+VGPICETGD +A +R++ GD+ Sbjct: 311 AGMNDLARPSLYKAYHHIVPASK--KEGNLKKADVVGPICETGDILAEDRELPPLNEGDI 368 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + + GAYG + YNSR E++ + IIR R T +LI + I Sbjct: 369 IAVLSAGAYGFTMASNYNSRPRPAEVIAKEGRAEIIRQRETLGDLISKEEI 419 >gi|260767552|ref|ZP_05876488.1| diaminopimelate decarboxylase [Vibrio furnissii CIP 102972] gi|260617452|gb|EEX42635.1| diaminopimelate decarboxylase [Vibrio furnissii CIP 102972] Length = 417 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 183/417 (43%), Positives = 254/417 (60%), Gaps = 4/417 (0%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AENVSL +LA TP Y YS +E+++ F + +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAENVSLAQLAEDYGTPLYVYSRATLERHWHAFDKSVGDHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R +AA ++VFSGVGKT E+ AL I Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSAGELERVVAAGGDPAKVVFSGVGKTAAEMKRALALKI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESESEL+ LNQ A +G KAPI+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESESELERLNQVAGEMGVKAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A L + I G+D HIGSQ+ IE F A L L L++ G +I+H+DVGGG Sbjct: 181 DVYRLAQRLDHISIHGIDCHIGSQLTAIEPFIDATDRLLALIDNLKAEGIHIKHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + + ++I EPGR + A+ G+L+T+V +K + K Sbjct: 241 LGVVYRDELPPQPSEYAKALLSRLANHQELELIFEPGRAIAANAGVLLTRVEYLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + + + D+VGP+CETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVS--PREGAALTYDLVGPVCETGDFLGKDRSL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL + GAYG S YN+R E++V+G H++R R L L+S+ Sbjct: 358 LQQGDLLAVRSAGAYGFAMSSNYNTRTRAAEVIVDGGTTHVVRQREELSSLWALESL 414 >gi|187735226|ref|YP_001877338.1| diaminopimelate decarboxylase [Akkermansia muciniphila ATCC BAA-835] gi|187425278|gb|ACD04557.1| diaminopimelate decarboxylase [Akkermansia muciniphila ATCC BAA-835] Length = 429 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 177/430 (41%), Positives = 248/430 (57%), Gaps = 13/430 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M +F Y G+L+ ENV+L++LA TP Y YS I ++ A ++ V YA+K Sbjct: 1 MHSFAYKNGTLYCENVNLQELADKESTPLYVYSKQTILNHFHRLREALAPLNAEVAYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SN A++ +A G+G DIVS GEL R L A + ++GVGKT EI AL GIY Sbjct: 61 ACSNIAILNLMARNGAGFDIVSGGELFRVLKAGGDPSKCTYAGVGKTEQEIRYALAQGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL+ +N A S+G KAP+A RVNP++ A THK I+TGK E+KFG+ +I S Sbjct: 121 CFNVESEAELRAINAIAASMGVKAPVAVRVNPNVEAGTHKYITTGKAENKFGVDFERIES 180 Query: 181 LYAY-ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG- 238 LY A LP + + G+ MHIGSQ+ Q + F +A + + L L+ GG Sbjct: 181 LYEMAARELPNLHLKGLQMHIGSQLTQAKPFLEAVRKVAPLAASLKEKHGIEFFSIGGGI 240 Query: 239 ----------GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVT 288 G+ ++ D + S YA + L II+EPGR +V + G L+T Sbjct: 241 GIVYQGTLDSGVQEWWNEDCAQLTLSTYAQAVVPTLQPLGLHIIVEPGRLIVGNAGALIT 300 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 + + K KTF I+D MND +RP LY YHEI + + AD+VGPICE+G Sbjct: 301 RCLYEKNGKAKTFKIVDAGMNDLIRPALYQGYHEIIPVREHPS-GSCVTADVVGPICESG 359 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 DF+A NR + R G+LL + GAYG S YNSR + E++V+G Q+++IR R +++ Sbjct: 360 DFLAQNRDMPDVRQGELLAVLSAGAYGFSMSSNYNSRPMAEEVLVDGDQWNVIRSRQSWE 419 Query: 409 ELIELDSIPA 418 +LI +SIP Sbjct: 420 DLIRGESIPE 429 >gi|71905849|ref|YP_283436.1| diaminopimelate decarboxylase [Dechloromonas aromatica RCB] gi|71845470|gb|AAZ44966.1| diaminopimelate decarboxylase [Dechloromonas aromatica RCB] Length = 420 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 183/420 (43%), Positives = 261/420 (62%), Gaps = 7/420 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM----DTMVC 56 M+ F G LHAE+V+L +A TP Y YS A+E + F + G +VC Sbjct: 1 MTHFALNNGVLHAESVALPAIADQFGTPAYVYSRAALEASLREFHDVLGGHVAGQGALVC 60 Query: 57 YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 YA+KANSN A++ A LG+G DIVS GEL+R LAA +++VFSGVGKT DE+ LAL Sbjct: 61 YAVKANSNLAILNVFARLGAGFDIVSGGELQRVLAAGADPKKVVFSGVGKTADEMKLALD 120 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 GI+CFNVES +EL+ LN+ A GKKAPI+ RVNP+++ TH ISTG K KFG+ Sbjct: 121 VGIFCFNVESAAELERLNEVASQCGKKAPISLRVNPNVDPKTHPYISTGLKGAKFGVAYD 180 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 LY A+ LP ++++G+D HIGSQ+ F +A + L Q+ + G +I H+D+ Sbjct: 181 NALDLYRRAAALPSIEVTGIDCHIGSQLLDPSPFVEALDRILALVDQMAAEGIHIHHLDL 240 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 GGGLGI Y+++ P+ + Y + + +++LEPGR LV + G+L+T++ +K+ Sbjct: 241 GGGLGIKYNAEQAQPTVASYLTPLLDKLAGRGLQVVLEPGRRLVGNAGLLLTRIEYLKQG 300 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 K F I+D AMND MRP LY+A+H+IN +V +G D+VGP+CETGDF+ R Sbjct: 301 EAKNFAIIDAAMNDLMRPALYEAWHDINPVVPRSGVATE--YDVVGPVCETGDFLGQARP 358 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + + GDLL + GAYG + YN+R E+MV+G + H+IR R T ++L +SI Sbjct: 359 L-VVEAGDLLAVMSAGAYGMAMASNYNTRPRAVEVMVDGDKIHVIRQRETVEQLYAGESI 417 >gi|319406349|emb|CBI79988.1| Diaminopimelate decarboxylase [Bartonella sp. AR 15-3] Length = 424 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 223/423 (52%), Positives = 299/423 (70%), Gaps = 1/423 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y++G LHAE++SL LA V TPFYCYS + N+ + AF M ++ YA+K Sbjct: 1 MHFFSYYQGELHAEDLSLSMLAQEVGTPFYCYSARTLITNFENYQQAFQNMPYLIAYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQA+++ LA G+G D+VSEGELRRALAA +P RIV+SGVGKT+ EID AL I+ Sbjct: 61 ANSNQAILRLLAQSGAGADVVSEGELRRALAAGIPTHRIVYSGVGKTVKEIDFALTQNIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+L A I+ R+NPD++A THKKI+TGK E+KFGIP+ Sbjct: 121 CFNVESEPELEQLSARAVALSTTARISLRINPDVDAKTHKKITTGKSENKFGIPLSSARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LPG+ + GVD+HIGSQI + F AF + D +QL ++G+ I H+D+GGGL Sbjct: 181 VYKKAAQLPGLYVCGVDIHIGSQICDLTPFEDAFLITADFVRQLWNDGYAITHVDIGGGL 240 Query: 241 GIAYHSDHR-PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI+Y S+H PS DYA+L+ ++ L IILEPGR +V + GILVT VI +K+ ++ Sbjct: 241 GISYGSEHYSVPSPFDYAALVRKHIAPLGINIILEPGRSIVGEAGILVTSVIHLKRGKER 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMNDF+RPTLY+A+ + + D L I+ADIVGP+CETGD++ LNR + + Sbjct: 301 NFVIVDAAMNDFIRPTLYEAWQNVLLVKEKPIDTLLINADIVGPVCETGDYLGLNRSLPI 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDLL I GAYGAV S TYNSRLLIPE++V + + +IRPR+ + +LI LD IP W Sbjct: 361 LSTGDLLVITGAGAYGAVMSNTYNSRLLIPEVLVQDAHYAVIRPRLDYGQLIGLDQIPNW 420 Query: 420 LQK 422 ++ Sbjct: 421 IEN 423 >gi|262278116|ref|ZP_06055901.1| diaminopimelate decarboxylase [Acinetobacter calcoaceticus RUH2202] gi|262258467|gb|EEY77200.1| diaminopimelate decarboxylase [Acinetobacter calcoaceticus RUH2202] Length = 416 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 196/416 (47%), Positives = 269/416 (64%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE SLE+LA TP Y YS TA EK+YL AFD +D +C+A+K Sbjct: 1 MS-FTRINGVLHAEQCSLEQLAQQFGTPLYVYSKTAFEKHYLDMDRAFDFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LG+G DIVS GEL R L A A ++VFSG+GKT +I+ +L GI Sbjct: 60 SNSNLAVLNVLAKLGAGFDIVSGGELARVLKAGGDASKVVFSGLGKTEADIETSLNVGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL L + A LGKKAPI+ RVNPD++A TH ISTG KE+KFGIP ++ Sbjct: 120 CFNVESYAELDRLQKVAARLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYE 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++LP ++I G+D HIGSQ+ + + F A + + +L+ G N++HID+GGGL Sbjct: 180 TYQYAASLPNLEIIGIDCHIGSQLTETKPFVDALDRVMVMIDELKKLGINLKHIDIGGGL 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PPS +YA+ + L K+ +EPGR + A+ G+L+TKV +K ++ + Sbjct: 240 GVCYKDE-TPPSVEEYANSMKPALEKLGLKVYMEPGRSISANAGVLLTKVDLLKPTSHRN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+ +I +V P+ D D+VG ICETGDFI +R +A Sbjct: 299 FAIIDAAMNDLIRPALYEAWMDIQPVV-PSTDTEEKTWDLVGAICETGDFIGKDRSLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + DLL + GAYG V S YN+R E+MV+G + H+IR R T + L E + + Sbjct: 357 KENDLLAVLGAGAYGFVMSSNYNTRGRAAEVMVSGDKAHLIRERETVESLWEKERL 412 >gi|323697888|ref|ZP_08109800.1| diaminopimelate decarboxylase [Desulfovibrio sp. ND132] gi|323457820|gb|EGB13685.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans ND132] Length = 412 Score = 307 bits (785), Expect = 3e-81, Method: Composition-based stats. Identities = 173/414 (41%), Positives = 253/414 (61%), Gaps = 3/414 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+ +G L AE VS+ LA TP Y YS +++ F +AFD +D + C+++K Sbjct: 1 MHHFQQRDGVLFAEEVSVTALAKQYCTPLYIYSAATFRRHFHAFDSAFDALDHLTCFSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+K LA G+G+DIVS GEL RAL A V RIV+SGVGK EI AL++ I Sbjct: 61 ANSNLAVLKMLAAEGAGMDIVSGGELYRALQAGVDPSRIVYSGVGKRDSEIREALEARIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES +EL+ ++Q A +G A ++FR+NPD++ TH ISTG +++KFG+ I Sbjct: 121 MFNVESLAELERIDQVAGEMGTTARVSFRINPDVDPQTHPYISTGMQKNKFGLDIDMSMQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A+ L V+ G+D HIGSQ+ ++ F +A L +L+ G I+++D+GGGL Sbjct: 181 AYKRAAELKHVEPVGMDCHIGSQLTSLDPFLEALDKLLAFNARLKDLGIEIKYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ + PP +++ + L K+ILEPGR + + GILVT+V+ K + K Sbjct: 241 GIPYNEE-EPPHPAEFGKALSDKLKGLPLKVILEPGRVIAGNAGILVTEVVYTKSNPAKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I+D AMND +RP+LY +YH I + R D+VGPICE+GDF+A +R++ Sbjct: 300 FLIVDAAMNDLVRPSLYGSYHRIAEVE--PKGRAPKVFDVVGPICESGDFLARDRELPEV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 G+LL + GAYG S YNSR E++V+G + + R R T+ +L+ + Sbjct: 358 MQGELLVVYSAGAYGFSMSSNYNSRPRACELLVDGDKVIVARRRETYDDLLMNE 411 >gi|332994942|gb|AEF04997.1| putative diaminopimelate decarboxylase [Alteromonas sp. SN2] Length = 416 Score = 307 bits (785), Expect = 3e-81, Method: Composition-based stats. Identities = 186/414 (44%), Positives = 254/414 (61%), Gaps = 2/414 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G L AE+V++ +A QTP Y YS +E+++ F++A ++CYA+K Sbjct: 1 MDFFAYKNGQLFAEDVAVADIAAQYQTPVYVYSRATLERHWHAFNDAIGEHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ TLA +GSG DIVS GEL R + A A ++VFSGVGK DEI AL+ GI Sbjct: 61 ANSNLGVLSTLAKIGSGFDIVSGGELARVIEAGGDASKVVFSGVGKKADEIRYALEQGIM 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL +N A SLGKKAPI+ R+NPD++A TH ISTG K +KFGI + Sbjct: 121 CFNVESEPELHRINAVAESLGKKAPISLRINPDVDAKTHPYISTGLKANKFGIARERALQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A++LP + + G+D HIGSQ+ +I F A + L L +L G I H+DVGGGL Sbjct: 181 TYELAASLPYLNVVGMDCHIGSQLTEIGPFVDALERLLLLIDELAERGITIDHLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P + A++ + G K+ILEPGR + A+ GILVT+V IK+ +K+ Sbjct: 241 GVTYNDEEPPHPKAYAAAMAEKMVGRENLKLILEPGRAIAANAGILVTEVEFIKEGEEKS 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ V + D+VGP+CETGDFI +R++A Sbjct: 301 FAIVDAAMNDLLRPALYSAWQ-NIIPVKQESTATARNYDVVGPVCETGDFIGKDRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 P DLL + GAYG + YNSR EIMV+G ++R R ++L + + Sbjct: 359 EPTDLLAVRSAGAYGFAMASNYNSRCRPAEIMVDGDATIVVREREILKDLWKGE 412 >gi|197104100|ref|YP_002129477.1| diaminopimelate decarboxylase [Phenylobacterium zucineum HLK1] gi|196477520|gb|ACG77048.1| diaminopimelate decarboxylase [Phenylobacterium zucineum HLK1] Length = 422 Score = 307 bits (785), Expect = 3e-81, Method: Composition-based stats. Identities = 189/424 (44%), Positives = 268/424 (63%), Gaps = 6/424 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM---VCY 57 M+ F+ G L E+V L ++A V TP Y YS+ +E++Y +A + + Sbjct: 1 MNHFELRGGELFCEDVPLARIAQAVGTPVYVYSSATLERHYTVLRDALVAHGVKDPLIAF 60 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+KANSN AV++TLA LG+G D+VSEGE+RRALAA VP ERIVFSGVGKT E+ ALQ+ Sbjct: 61 AVKANSNVAVLRTLARLGAGADVVSEGEVRRALAAGVPPERIVFSGVGKTEAEVAFALQA 120 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G+ NVESE EL +++ A LG +A IA RVNPD+ A H+KISTGK E+KFG+ + Sbjct: 121 GVAEINVESEPELDLVDRVAQRLGVRAQIAIRVNPDVQAGGHEKISTGKSENKFGVSFSE 180 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 LYA AS L GV+ GV HIGSQI + +AF +R L ++L+ G ++ +D+G Sbjct: 181 AERLYAKASNLAGVRPVGVACHIGSQITDLAPMAEAFAKMRGLVERLQREGLRVERLDLG 240 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GGLG+ Y + PPS DYA++I + G L + EPGR + A+ G+L+ V + + Sbjct: 241 GGLGVPYFNQPEPPSPDDYAAMIAETVGGLDVGLAFEPGRMIAANAGVLIAGVTHVHERP 300 Query: 298 -DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + F++LD AMND +RP +YDAYH+I + G+ D+VGP+CETGD +R Sbjct: 301 EGRRFLVLDAAMNDLIRPAMYDAYHDIRAVRPREGEAR--PYDVVGPVCETGDTFTRDRA 358 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + PGDL+ GAYGA + YNSRLL+PE++V G++F ++RPR T+ +++ + Sbjct: 359 LPPLEPGDLVAFMTAGAYGAAMASEYNSRLLVPEVLVKGAEFAVVRPRPTYDDMLARERP 418 Query: 417 PAWL 420 WL Sbjct: 419 APWL 422 >gi|83595885|gb|ABC25247.1| diaminopimelate decarboxylase [uncultured marine bacterium Ant4D3] Length = 421 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 180/416 (43%), Positives = 261/416 (62%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y LHAE++ L ++A TP Y YS +E+NY+ +S A +G + +VCYA+K Sbjct: 5 MDNFEYRGEKLHAEDLDLNQIAEQFGTPTYVYSRDTLERNYVAYSQALEGCEHLVCYAVK 64 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LG+G DIVS GEL R L A +RIVFSGVGK E+ AL+ G++ Sbjct: 65 ANSNIAVLNVLAQLGAGFDIVSVGELERVLVAGADPKRIVFSGVGKQTHEMQRALEVGVH 124 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL+ L A + AP++ R+NPD++A TH ISTG KE+KFGI I Q + Sbjct: 125 CFNVESEAELERLQNVAAGMNCIAPVSLRINPDVDAKTHPYISTGLKENKFGIGIDQAPA 184 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A+ + +K+ GVD HIGSQ+ I+ + A L L + + G I+H+D+GGGL Sbjct: 185 AYAQAAAMAHIKVIGVDCHIGSQLTSIDPYLDAMDRLFGLIDTIAAQGIAIEHLDLGGGL 244 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP+ +D+ + + + G+ + ++ EPGR + AD G+L+T+V IK + DK Sbjct: 245 GVCYGDE-EPPAIADFMARVRAHLGDRKLALVFEPGRSICADAGVLLTRVEYIKNNQDKY 303 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ +I + + + H + DIVGPICET DF+ +R +A Sbjct: 304 FAIVDAAMNDLIRPALYSAWQDIIPVNLHSNSQAH-NFDIVGPICETSDFLGKDRNLA-I 361 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 DLL + +GAYG + YNSR E+MV+G++ H+I R + + + Sbjct: 362 EANDLLAVCSSGAYGFAMASNYNSRNRAAEVMVDGNKSHLIGEREELSQQWAREHL 417 >gi|120602484|ref|YP_966884.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris DP4] gi|120562713|gb|ABM28457.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris DP4] Length = 412 Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats. Identities = 176/414 (42%), Positives = 250/414 (60%), Gaps = 3/414 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y EGSL AE+VS+ LA TP Y YS +E++Y F +AF + C+++K Sbjct: 1 MHLFQYREGSLFAEDVSIIDLASTYGTPLYVYSAGTLERHYRAFDSAFGKAAHLTCFSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SN ++K L LG+G+DIVS GEL RAL A +P RIV+SGVGK DEI AL++ I Sbjct: 61 ACSNIHILKLLGSLGAGVDIVSGGELHRALLAGIPGRRIVYSGVGKRPDEIRSALEADIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+T+ + A S+G A ++ R+NPD++ +TH ISTG +++KFGI + Q Sbjct: 121 MFNVESLQELRTIEEVAASMGTTARVSLRINPDVDPHTHPYISTGLQKNKFGIEMTQALE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A LP + G+D HIGSQ+ + F +A + + + L G +I ++D+GGGL Sbjct: 181 GYMLARDLPHIDPIGIDCHIGSQLTSLSPFLEALDKVLEFREHLSILGLDISYLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP D+ + + L ++LEPGR + + GILVT+V+ K + K Sbjct: 241 GITYGEE-TPPHPRDFGRAVLERTKGLNLTLVLEPGRVIAGNAGILVTEVLYTKTTPSKQ 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D AMND +RP+LY +YH I ++ R D+VGPICE+GDF+A +R + Sbjct: 300 FVIVDAAMNDLVRPSLYASYHRIAEVLPH--GRTEQAVDVVGPICESGDFLARDRVLPAV 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 G+LL + GAYG S YNSR E++V G IR R T+ +L L+ Sbjct: 358 EQGELLAVFSAGAYGFSMSSQYNSRPRAAEVLVRGDTAKSIRRRETYDDLTALE 411 >gi|319409426|emb|CBI83072.1| Diaminopimelate decarboxylase [Bartonella schoenbuchensis R1] Length = 424 Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats. Identities = 210/423 (49%), Positives = 298/423 (70%), Gaps = 1/423 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + L+AE +SL LA V TPFYCYS A+ ++ + NAF + +++ YA+K Sbjct: 1 MRFFPYHQDMLYAEGLSLSTLADKVGTPFYCYSANALVTHFQDYQNAFHDIASLIAYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQA+++ LAH G+G D+VSEGELRRALA +PA RIV++GVGKT+ EID AL I Sbjct: 61 ANSNQAILRLLAHNGAGADVVSEGELRRALAVGIPAHRIVYAGVGKTVREIDFALAHDIC 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+L K A I+ R+ PD++A TH+KI+TGK E+KFGIP+ + Sbjct: 121 CFNVESEQELEQLSARAVALSKNARISLRLTPDVDAKTHQKITTGKSENKFGIPLALAYD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A+ LPG+++ GV MHIGSQI ++ F +AF + D + LR++G+ I H+D+GGGL Sbjct: 181 AYKKAAQLPGLQVCGVAMHIGSQICDLKPFEEAFIIAADFVRHLRNDGYAITHVDIGGGL 240 Query: 241 GIAY-HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 G++Y PS DYA+L+ ++ L +ILEPGR +V + G+L+T V+ K+ + Sbjct: 241 GVSYGRESCLVPSPFDYAALVKKHIAPLGITVILEPGRSIVGNAGVLITSVVYFKRGKGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMNDFMRPTLYDA+H++ + + + I+ADIVGP+CETGD++AL+R + + Sbjct: 301 NFVIVDAAMNDFMRPTLYDAWHDVIPVKKTPLNGMMINADIVGPVCETGDYLALDRCLPV 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDLL I GAYGAV + TYNSRLL PE++V +++ ++RPR+ + +LI D IP W Sbjct: 361 LEAGDLLAITGAGAYGAVMANTYNSRLLAPEVLVQDTRYAVVRPRLDYAQLIGFDHIPDW 420 Query: 420 LQK 422 ++ Sbjct: 421 VEN 423 >gi|82701675|ref|YP_411241.1| diaminopimelate decarboxylase [Nitrosospira multiformis ATCC 25196] gi|82409740|gb|ABB73849.1| diaminopimelate decarboxylase [Nitrosospira multiformis ATCC 25196] Length = 418 Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats. Identities = 193/414 (46%), Positives = 267/414 (64%), Gaps = 3/414 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 +F Y G L AE+V LE++A TP Y YS A+ Y F +AF G D +VCYA+KAN Sbjct: 6 SFSYRNGHLWAESVQLERIALEFGTPCYAYSRAALTTAYCEFDDAFAGRDHLVCYAVKAN 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN ++ LA LGSG DIVS GEL+R L A ++IVFSGVGK E+ AL++GI CF Sbjct: 66 SNLGILNLLARLGSGFDIVSGGELQRVLKAGGDPQKIVFSGVGKQPAEMKAALEAGILCF 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL LN+ A +GK AP++ RVNPD++A TH ISTG KE+KFGIP + +LY Sbjct: 126 NVESEAELHGLNRVAGEMGKVAPVSLRVNPDVDAKTHPYISTGLKENKFGIPFDEAEALY 185 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A A L V+++G+D HIGSQ+ ++ F + K + L +L + G I+H+D+GGGLGI Sbjct: 186 ASAQALGNVRVAGLDCHIGSQLTELAPFIETCKKMLGLLDRLEAQGLEIEHLDLGGGLGI 245 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + PPS+ +Y + GN + KI++EPGR LV + G+L+T V +K + + F Sbjct: 246 RYAGE-NPPSAREYVEALRSVVGNRRQKILIEPGRSLVGNAGVLLTTVEYLKPTPHRDFA 304 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D AMND MRP LY AYHEI +V + +VGP+CETGDF+ +R +AL + Sbjct: 305 IVDAAMNDLMRPALYKAYHEILPVVA-RNEMDAKTYQVVGPVCETGDFLGHDRHLALAQ- 362 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAYG S YN+R E+M++G + H+IR R + ++L+ + I Sbjct: 363 GDLLAVMSAGAYGMSMSSNYNARPRAAEVMIDGDRIHLIRERESVEQLMAGEKI 416 >gi|49476269|ref|YP_034310.1| diaminopimelate decarboxylase [Bartonella henselae str. Houston-1] gi|49239077|emb|CAF28380.1| Diaminopimelate decarboxylase [Bartonella henselae str. Houston-1] Length = 421 Score = 306 bits (783), Expect = 5e-81, Method: Composition-based stats. Identities = 223/421 (52%), Positives = 304/421 (72%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE +SL LA V TPFYCYS +A+ N+ + NAF M +++ YA+K Sbjct: 1 MRFFSYNQGVLHAEGLSLSALAQDVGTPFYCYSASAVVTNFKDYQNAFLDMPSLIAYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++ LA G+G D+VSEGELRRALAA +PA RIV+SGVGKT+ EID AL IY Sbjct: 61 ANSNQAVLRLLAANGAGADVVSEGELRRALAAGIPAHRIVYSGVGKTVKEIDFALAHDIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ AV+L K A ++ R+NPD++A TH+KI+TGK E+KFGIP+ Sbjct: 121 CFNVESEPELEQLSVCAVALSKTARVSLRINPDVDARTHRKITTGKSENKFGIPLSLAWD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A+ LPG+++ GVDMHIGSQI ++ F AF ++ D +QLRS+G+ + HID+GGGL Sbjct: 181 VYKKAAQLPGIQVCGVDMHIGSQICDLKPFEDAFLIVADFVRQLRSHGYALTHIDIGGGL 240 Query: 241 GIAYHSDHR-PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y ++H PS SDYA+L+ ++ L IILEPGR +V D G+LVT V+ +K+ + Sbjct: 241 GIDYGNEHHSVPSLSDYAALVRKHIAPLGIHIILEPGRSIVGDAGVLVTSVLYLKRGNGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND MRPTLYDA+ + + + D L + ADIVG +CETGD++AL+R++ Sbjct: 301 NFVIVDAAMNDLMRPTLYDAWQNVLLVEQASKDALLMKADIVGAVCETGDYLALDRRVPT 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDLL I + GAYGAV + TYNSRLL+PE++V +++ +IRPR+ + +LI D +P W Sbjct: 361 LATGDLLAIMEAGAYGAVMASTYNSRLLVPEVLVQDTRYAVIRPRLDYAQLIGCDYVPDW 420 Query: 420 L 420 + Sbjct: 421 I 421 >gi|284162042|ref|YP_003400665.1| diaminopimelate decarboxylase [Archaeoglobus profundus DSM 5631] gi|284012039|gb|ADB57992.1| diaminopimelate decarboxylase [Archaeoglobus profundus DSM 5631] Length = 419 Score = 306 bits (783), Expect = 5e-81, Method: Composition-based stats. Identities = 163/422 (38%), Positives = 234/422 (55%), Gaps = 10/422 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 FK +G LH E+VS+ +LA + TP Y S +E+N + AF D + YA+KAN+ Sbjct: 2 FKVIDGVLHVEDVSVVELAEELGTPLYITSKAKLEENIEAYKRAFP--DAEILYAVKANN 59 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N A+++ +A G G D+ S GEL A A P+ +++F+G K+ +EI++ + + Sbjct: 60 NLAIMRIIAKHGFGADVFSGGELYMARLAGFPSNKLLFNGNSKSDEEIEMGIDCNVKFSV 119 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 + EL T+ + A GK IAFRVNPDI+ TH KI+TG K KFGIP Y Sbjct: 120 DSLD-ELYTIQKIAEKKGKIVEIAFRVNPDIDPKTHPKIATGLKTSKFGIPWDIALEAYK 178 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A LP VK G+ HIGSQI +I+ F +A L DL ++ G I+ +D+GGGL I Sbjct: 179 KAVELPNVKPVGIHCHIGSQIKEIDPFVEALNRLFDLAVEIEKLGVEIRFLDIGGGLAID 238 Query: 244 YHSDHRPPSSSDYASLIHQYFGNL-----QCKIILEPGRFLVADVGILVTKVISIKKSAD 298 Y + P ++ + K+ LEPGR LV + IL+TKV ++K A Sbjct: 239 YTGEGAPTPQDFANEILPVFNERKKELNSDPKLYLEPGRSLVGNTTILLTKVNAVK-KAY 297 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K FV +D N +RP LY+AYH + N IVGPICE+GD +A +RK+ Sbjct: 298 KNFVAVDAGFNLLIRPVLYNAYHR-VAVANKMDKEAEETYTIVGPICESGDILAEDRKLP 356 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 GDL+ I TGAYG V S YN R E++V+GS+++++R R ++ +LI IP Sbjct: 357 KVEKGDLIAIFDTGAYGFVMSSQYNGRPRCAEVLVDGSRWYVVRERESYGDLIYKQRIPD 416 Query: 419 WL 420 +L Sbjct: 417 FL 418 >gi|37678270|ref|NP_932879.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016] gi|37197009|dbj|BAC92850.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016] Length = 417 Score = 306 bits (783), Expect = 5e-81, Method: Composition-based stats. Identities = 188/420 (44%), Positives = 259/420 (61%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE VSL LA TP Y YS +E+++ F + +G +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAEEVSLTSLAEQYGTPLYVYSRATLERHWHAFDRSVEGHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R LAA ++VFSGVGKT E+ AL+ I Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSGGELERVLAAGGDPRKVVFSGVGKTEAEMRRALELNI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG KAPI+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNRVAGELGVKAPISLRINPDVDAQTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y +A +L + + G+D HIGSQ+ IE F A L L L+ G NI+H+DVGGG Sbjct: 181 AVYQFAQSLANLNVQGIDCHIGSQLTAIEPFIDATDRLLALIDDLKEQGINIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y ++ P S +L+ + + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVVYRNELPPQPSEYAKALLGRLENHQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + G+ + D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVQPRQGEA--VTYDLVGPICETGDFLGKDRSL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 DLL + GAYG V S YN+R E+MV+G Q +++R R + L EL+ +P Sbjct: 358 LAENDLLAVRSAGAYGFVMSSNYNTRARAAEVMVDGKQHYLVRQREELRSLWELEHILPE 417 >gi|170742956|ref|YP_001771611.1| diaminopimelate decarboxylase [Methylobacterium sp. 4-46] gi|168197230|gb|ACA19177.1| diaminopimelate decarboxylase [Methylobacterium sp. 4-46] Length = 423 Score = 306 bits (783), Expect = 6e-81, Method: Composition-based stats. Identities = 217/421 (51%), Positives = 299/421 (71%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+LHAE V L +LA V TPFYCY++ +E+++ F+ AF G D +VC+A+K Sbjct: 1 MHHFTYRDGTLHAEEVDLARLAEAVGTPFYCYASATLERHFRVFAEAFAGDDPLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ +LA LG+G+DIVSEGELRRALAA VP ERIVFSGV KT E+ +AL +GI Sbjct: 61 ANSNQAVLASLARLGAGMDIVSEGELRRALAAGVPGERIVFSGVAKTRAEMAVALDAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L++ A + G+ AP++ RVNPD++A TH KISTGK E+KFGIPI + Sbjct: 121 CFNVESEPELEALSEVARARGQTAPVSIRVNPDVDARTHAKISTGKSENKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+ ++GVDMHIGSQI + + A LL +L + L + GH + HID GGGL Sbjct: 181 VYARAAALPGLAVAGVDMHIGSQITDLAPYDNAASLLAELARDLMAAGHRLHHIDFGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASL-IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP + I +F L + + E GR + + GILVT+V+ +K+ + Sbjct: 241 GIPYRDDNAPPPDPAAFAAVIRPHFRPLGLRPVFEIGRMIAGNAGILVTRVVYVKEGEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 +FVI+D MND +RPTLY+AYH + + P + + AD+VGP+CE+GD++AL R++ Sbjct: 301 SFVIVDAGMNDLIRPTLYEAYHALRPVRQPDPEAPRLTADVVGPVCESGDYLALGREMPA 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDLL + GAYGAVQ+GTYN+R L+PE++V G+ ++RPR +++ELI LD +P W Sbjct: 361 VAPGDLLAVMSAGAYGAVQAGTYNTRRLVPEVLVRGAAHAVVRPRQSYEELIGLDRVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|119503712|ref|ZP_01625794.1| putative diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2080] gi|119460220|gb|EAW41313.1| putative diaminopimelate decarboxylase [marine gamma proteobacterium HTCC2080] Length = 418 Score = 306 bits (783), Expect = 6e-81, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 261/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M++F+ + L E V+L+++A TP Y YS IE+ YL + A D ++CYA+K Sbjct: 1 MNSFERHKDRLFCEEVALDEMASKYGTPLYVYSRACIEQAYLAYQTALADHDHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN A++ LA LG+G DIVS GEL R +AA ++VFSGV KT I AL+ GI+ Sbjct: 61 ANSNLAILSVLAKLGAGFDIVSLGELERVIAAGGDPTKVVFSGVCKTHAAIKRALEVGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESESEL+ L++ A + G API+ RVNPD++A TH I+TG K++KFG+ + Sbjct: 121 CFNVESESELEALSEVAQASGMVAPISLRVNPDVDAQTHPYIATGLKDNKFGVELDSALR 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY A LPG+K G+D HIGSQI I F +A L D+ + L+S G ++HID+GGGL Sbjct: 181 LYRKAVALPGIKPIGIDCHIGSQILDIAPFSEAMDHLIDVLENLKSEGIMLEHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + P +DY + + Q + +ILEPGR +VA+ G+L+T+V+ +K + K Sbjct: 241 GIPY-GNENAPKIADYVAALTQGLSDHSLTLILEPGRSIVAEAGVLLTEVMYLKPTPHKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP LY A+ +I + N GD DIVGP+CETGDF+ +R ++ Sbjct: 300 FALVDAAMNDLLRPALYGAWQDIVPLNNRNGDAKC--WDIVGPVCETGDFLGKDRNLS-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD+L + GAYG V + YN+R E+MV+GS H+IR R + L + + Sbjct: 357 TEGDVLAVMTAGAYGFVMASNYNTRPRSAEVMVDGSHSHLIRAREPLETLWADECL 412 >gi|114799974|ref|YP_762135.1| diaminopimelate decarboxylase [Hyphomonas neptunium ATCC 15444] gi|114740148|gb|ABI78273.1| diaminopimelate decarboxylase [Hyphomonas neptunium ATCC 15444] Length = 424 Score = 305 bits (782), Expect = 6e-81, Method: Composition-based stats. Identities = 194/420 (46%), Positives = 267/420 (63%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G L E V L ++A V TP Y YST +E++ + AF ++ Y++K Sbjct: 1 MHHFNYAGGRLQCEGVDLGRVADEVGTPVYVYSTATLERHARVIAEAFSSQKVLIAYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN N AV+ TLA G G D+VS GE++RA+ A +PA RIVFSGVGKT E+ LAL++GI+ Sbjct: 61 ANGNLAVLATLAAEGCGADVVSGGEMQRAMKAGIPAARIVFSGVGKTAAEMKLALEAGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ L++ A LG KAPIA RVNPD+ A H ISTGK DKFG+P + + Sbjct: 121 QFNVESAGELRLLSRVASGLGLKAPIALRVNPDVAAGGHPNISTGKSGDKFGVPWGEAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA A LPG+++ GVD+HIGSQI ++ AF+ + L +LR GH+I+ IDVGGGL Sbjct: 181 LYAEAGKLPGIQVVGVDVHIGSQIGELGPMRAAFEKVVALALRLRGQGHDIRRIDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y P S YA++I + ++ILEPGR + + G+L+T + K++ D+T Sbjct: 241 GIPYRETDAPAPPSAYAAMIAEVTAGHGFEVILEPGRVIAGNAGVLLTTALYEKEAPDRT 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I+D MND +RP LY A+H+I + PA D D+VGPICE+ D A R + Sbjct: 301 FLIIDAGMNDLIRPALYGAHHDIRPLDEPAQDAAEKVYDVVGPICESTDKFATARTLPKV 360 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 PGD L GAYGAV S YN+R L+PE++V+G ++ I+R R F+E+ L+ +P W+ Sbjct: 361 TPGDRLAFMSAGAYGAVLSSAYNARPLVPEVLVSGDRYSIVRRRPDFEEMTMLEEVPDWI 420 >gi|27364546|ref|NP_760074.1| diaminopimelate decarboxylase [Vibrio vulnificus CMCP6] gi|320154948|ref|YP_004187327.1| diaminopimelate decarboxylase [Vibrio vulnificus MO6-24/O] gi|27360665|gb|AAO09601.1| diaminopimelate decarboxylase [Vibrio vulnificus CMCP6] gi|319930260|gb|ADV85124.1| diaminopimelate decarboxylase [Vibrio vulnificus MO6-24/O] Length = 417 Score = 305 bits (782), Expect = 6e-81, Method: Composition-based stats. Identities = 188/420 (44%), Positives = 260/420 (61%), Gaps = 5/420 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE VSL LA TP Y YS +E+++ F + +G +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAEEVSLTSLAEQYGTPLYVYSRATLERHWHAFDRSVEGHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R LAA ++VFSGVGKT E+ AL+ I Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSGGELERVLAAGGDPRKVVFSGVGKTEAEMRRALELNI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG KAPI+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNRVAGELGVKAPISLRINPDVDAQTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y +A +L + + G+D HIGSQ+ IE F A L L L+ G NI+H+DVGGG Sbjct: 181 AVYQFAQSLANLNVQGIDCHIGSQLTAIEPFIDATDRLLALIDDLKEQGINIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y ++ P S +L+ + + ++I EPGR + A+ G+L+TKV +K + K Sbjct: 241 LGVVYRNELPPQPSEYAKALLGRLENHQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + G+ + D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVQPRQGEA--VTYDLVGPICETGDFLGKDRSL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 DLL + GAYG V S YN+R+ E+MV+G Q +++R R + L EL+ +P Sbjct: 358 LAENDLLAVRSAGAYGFVMSSNYNTRVRAAEVMVDGKQHYLVRQREELRSLWELEHILPE 417 >gi|262376587|ref|ZP_06069815.1| diaminopimelate decarboxylase [Acinetobacter lwoffii SH145] gi|262308297|gb|EEY89432.1| diaminopimelate decarboxylase [Acinetobacter lwoffii SH145] Length = 414 Score = 305 bits (782), Expect = 7e-81, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 257/416 (61%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE SL++LA TP Y YS +EK++L AF+ +D +C+A+K Sbjct: 1 MS-FTRINGVLHAEQCSLQQLAEQFGTPLYVYSKATLEKHFLDMDRAFNFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA G+G DIV+ GEL R L A +IVFSG+GK+ +I AL+ GI Sbjct: 60 SNSNLAVLNVLAKQGAGFDIVTGGELARVLKAGGEPSKIVFSGLGKSEADIKKALEVGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL + + A L KAPI+ RVNPD++A TH ISTG KE+KFGIP + Sbjct: 120 CFNVESYAELDRIQKVAAELNVKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDSVFE 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++LP + + G+D HIGSQ+ + + F A + + QL+ G +++HID+GGGL Sbjct: 180 TYQYAASLPNLDVVGIDCHIGSQLTETQPFVDALDRVIVMIDQLKEMGIHLKHIDIGGGL 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PPS +YA+ + L K+ +EPGR + A+ G+L+TKV +K + + Sbjct: 240 GVTYKDE-TPPSVEEYANALRPALEKLGLKVYMEPGRSISANAGVLLTKVDLLKPTNHRN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+ + V P D DIVG ICETGDF+ R++A Sbjct: 299 FAIIDAAMNDLIRPALYEAWMD-IQPVRPRTDAETKEWDIVGAICETGDFLGKERELA-I 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + D+L + GAYG V S YNSR E+MV+ Q H+IR R T + L E + + Sbjct: 357 KENDVLAVLGAGAYGFVMSSNYNSRGRAAEVMVDADQAHLIRERETIESLWERERL 412 >gi|299769073|ref|YP_003731099.1| diaminopimelate decarboxylase [Acinetobacter sp. DR1] gi|298699161|gb|ADI89726.1| diaminopimelate decarboxylase [Acinetobacter sp. DR1] Length = 416 Score = 305 bits (782), Expect = 7e-81, Method: Composition-based stats. Identities = 195/416 (46%), Positives = 270/416 (64%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE S+E+LA TP Y YS A EK+YL AFD +D +C+A+K Sbjct: 1 MS-FTRINGVLHAEQCSMEQLAQQFGTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LG+G DIVS GEL R L A A ++VFSG+GKT +I+ +L GI Sbjct: 60 SNSNLAVLNVLAKLGAGFDIVSGGELARVLKAGGDASKVVFSGLGKTEADIETSLNVGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL L + A LGKKAPI+ RVNPD++A TH ISTG KE+KFGIP ++ Sbjct: 120 CFNVESYAELDRLQKVAARLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYE 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++LP ++I G+D HIGSQ+ + + F A + + ++L+ G N++HID+GGGL Sbjct: 180 TYQYAASLPNLEIIGIDCHIGSQLTETKPFVDALDRVMLMIEELKKLGINLKHIDIGGGL 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PPS +YA+ + L K+ +EPGR + A+ G+L+TKV +K ++ + Sbjct: 240 GVCYKDE-TPPSVEEYANSMKPALEKLGLKVYMEPGRSISANAGVLLTKVDLLKPTSHRN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+ +I +V P+ D D+VG ICETGDFI +R +A Sbjct: 299 FAIIDAAMNDLIRPALYEAWMDIQPVV-PSSDTEEKTWDLVGAICETGDFIGKDRSLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + DLL + GAYG V S YN+R E+MV+G + H+IR R T + L E +S+ Sbjct: 357 KENDLLAVLGAGAYGFVMSSNYNTRGRAAEVMVSGDKAHLIRERETVESLWEKESL 412 >gi|294651118|ref|ZP_06728454.1| diaminopimelate decarboxylase [Acinetobacter haemolyticus ATCC 19194] gi|292823012|gb|EFF81879.1| diaminopimelate decarboxylase [Acinetobacter haemolyticus ATCC 19194] Length = 416 Score = 305 bits (782), Expect = 7e-81, Method: Composition-based stats. Identities = 191/416 (45%), Positives = 264/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE SL++LA TP Y YS +EK+YL AFD +D +C+A+K Sbjct: 1 MS-FTRINGVLHAEQCSLDQLAQQYGTPLYVYSKATLEKHYLDMDRAFDFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LG+G DIV+ GEL R LAA +IVFSG+GK+ +I+ AL GI Sbjct: 60 SNSNIAVLNVLAKLGAGFDIVTGGELARVLAAGGDPAKIVFSGLGKSEADIEKALTVGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL + + A LGKKAPI+ RVNPD++A TH ISTG KE+KFGIP + + Sbjct: 120 CFNVESHAELDRIQKVAAKLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVDA 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++L ++I G+D HIGSQ+ + + F A + + +QL+ G N++HID+GGGL Sbjct: 180 TYQYAASLSNLEIVGIDCHIGSQLTETKPFVDALDRVILMIEQLKKLGINLKHIDIGGGL 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP+ ++YA+ + L K+ +EPGR + A+ G L+TKV +K + + Sbjct: 240 GVCYKDE-TPPTVAEYANSMRPALEKLGLKVYMEPGRSISANAGALLTKVDLLKPTNHRN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+ + VNP D D+VG ICETGDF+ R +A Sbjct: 299 FAIIDAAMNDLIRPALYEAWMD-IQSVNPNSDVEVKTWDLVGAICETGDFLGKERNLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + D+L + GAYG V S YNSR E+MVNG Q ++IR R T + L E + + Sbjct: 357 QENDVLAVLGAGAYGFVMSSNYNSRGRAAEVMVNGDQVYLIRERETIESLWEKERL 412 >gi|322513198|ref|ZP_08066326.1| diaminopimelate decarboxylase [Actinobacillus ureae ATCC 25976] gi|322121029|gb|EFX92862.1| diaminopimelate decarboxylase [Actinobacillus ureae ATCC 25976] Length = 416 Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 262/416 (62%), Gaps = 2/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE+VS+ + + TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MNHFNYKNQQLFAEDVSVSDIINQYGTPAYIYSRATLERHWHAFDKAFGSHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGDPSKVVFSGVAKSHSEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ ++Q Sbjct: 121 CFNIESIAELHRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNQARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A +LP VKI+G+D HIGSQ+ +++ F A L L QL+ +G + H+D+GGGL Sbjct: 181 VYLLAKSLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMDQLKEDGIELHHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P + +L+ + G +IILEPGR + A+ GILVTKV +K + D+ Sbjct: 241 GVPYNGEEPPHPTEYAKALLEKLKGYADLEIILEPGRAITANAGILVTKVEYLKANEDRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY V+ + R D+VGPICET DF+ R++A Sbjct: 301 FAIVDTGMNDMIRPALYEAYM-QITEVDQSLVREKTVYDVVGPICETSDFLGKGRELA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + GAYGA S TYNSR EIMV+ H+I+ R +F +L L+ + Sbjct: 359 EQGDLIAMRSAGAYGAAMSSTYNSRPQAVEIMVDSDLAHLIKARASFADLWRLERL 414 >gi|152979892|ref|YP_001355061.1| diaminopimelate decarboxylase [Janthinobacterium sp. Marseille] gi|151279969|gb|ABR88379.1| diaminopimelate decarboxylase [Janthinobacterium sp. Marseille] Length = 427 Score = 305 bits (781), Expect = 8e-81, Method: Composition-based stats. Identities = 175/428 (40%), Positives = 247/428 (57%), Gaps = 15/428 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-----TMV 55 MS F Y +G L AEN L ++A +P Y YS A+ +N+ +++A +V Sbjct: 1 MSHFSYQDGVLCAENTPLTQIARQFGSPTYIYSKAALVENFSAYADACKQHGRNDETALV 60 Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 CY++K+NSN AV+ L LGSG DIVS GEL R LAA +++FSGVGK+ +E+ LAL Sbjct: 61 CYSVKSNSNLAVLNLLGKLGSGFDIVSGGELLRVLAAGGSPRKVIFSGVGKSREEMQLAL 120 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 I CFNVES EL LN A +GKKA ++ RVNP+++A TH ISTG K++KFGI Sbjct: 121 SHDILCFNVESIPELHRLNAVAAEMGKKASVSLRVNPNVDAKTHPYISTGLKDNKFGIAY 180 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 + Y A+ LP + + G+D HIGSQ+ +A L +L L + G ++ H+D Sbjct: 181 EDTLTTYRVAAALPNIDVVGIDCHIGSQLLDDAPLLEAVDKLIELIDTLDAEGIHLHHLD 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVT 288 +GGG+GI Y +D A Q G K++ EPGR +V + GIL+T Sbjct: 241 IGGGIGINYDNDQPVAVGDYLARLFAKIDAWRKQKHGGAPIKVLFEPGRSIVGNAGILLT 300 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 +V IK K F I+D AMND MRP +Y+A+H + + D+VGP+CE+G Sbjct: 301 EVQYIKHGETKNFAIVDAAMNDLMRPAMYEAWHGVLPVKQ--STAAAATYDVVGPVCESG 358 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D++A +R++A GDLL I GAYG S YN+R E+MV+G + H+IR R Sbjct: 359 DWLARSRELA-IEEGDLLAIMSAGAYGMTMSSNYNTRGRAAEVMVDGDKVHLIRKREAAS 417 Query: 409 ELIELDSI 416 +L L+S+ Sbjct: 418 DLFALESL 425 >gi|312795814|ref|YP_004028736.1| Diaminopimelate decarboxylase [Burkholderia rhizoxinica HKI 454] gi|312167589|emb|CBW74592.1| Diaminopimelate decarboxylase (EC 4.1.1.20) [Burkholderia rhizoxinica HKI 454] Length = 420 Score = 305 bits (781), Expect = 9e-81, Method: Composition-based stats. Identities = 182/420 (43%), Positives = 249/420 (59%), Gaps = 5/420 (1%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 +AF Y + LH E V +LA TP Y YS A+ Y ++ A G V YA+KA Sbjct: 3 NAFAYVDAQLHVERVPAGQLAEQYGTPLYVYSRAALTDAYQAYAGACTGRRAKVHYAVKA 62 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN AV+ A LG+G DIVS GEL R LAA +VFSGVGK ++ +AL++G+ C Sbjct: 63 NSNLAVLNVFARLGAGFDIVSGGELARVLAAGGKPHDVVFSGVGKNAADMRMALEAGVRC 122 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVES +EL LNQ A G+ API+ RVNPD++A TH ISTG K +KFG+ + Sbjct: 123 FNVESLAELARLNQIAGESGRIAPISLRVNPDVDAKTHPYISTGLKANKFGVAFDDARAA 182 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A + V+I+G+D HIGSQI +I + A + +L Q+ ++G I HIDVGGGLG Sbjct: 183 YRTALGMKHVRIAGIDCHIGSQITEISPYLDAIDKVLELVAQVEADGAPIDHIDVGGGLG 242 Query: 242 IAYHSDHRPPSSSDYASLIHQYFG--NLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 I Y + P + +++ + + +I EPGR LV + GIL+T+V +K A K Sbjct: 243 IRYDDETPPNIGTFVKTILDHFDRRGHGHREIWFEPGRSLVGNAGILLTRVEYLKPGAVK 302 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND RP +YD + V P R + DIVGP+CE+GD++A +R +A Sbjct: 303 HFAIVDAAMNDLARPAMYD-AYHAIDAVAPRDGRPPVTYDIVGPVCESGDWLARDRSLA- 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 PGDLL I TGAYG V S YN+R E++V+G Q H+ R R T +L++ + +P Sbjct: 361 LEPGDLLAIRSTGAYGFVMSSNYNTRPRAAELLVDGEQVHVARRRETLAQLMDGESVLPD 420 >gi|119943834|ref|YP_941514.1| diaminopimelate decarboxylase [Psychromonas ingrahamii 37] gi|119862438|gb|ABM01915.1| diaminopimelate decarboxylase [Psychromonas ingrahamii 37] Length = 421 Score = 305 bits (781), Expect = 9e-81, Method: Composition-based stats. Identities = 189/420 (45%), Positives = 250/420 (59%), Gaps = 6/420 (1%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L E + +E++ TP Y YS IE+++ F +A ++CYA+ Sbjct: 1 MDHFNYQNDGRLFVEGLPVEQVVKKTGTPAYIYSRATIERHWQAFDSAAGKHPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AV+ +A +GSG DIVS GEL R + A ++IVFSGVGKT EI ALQ+ I Sbjct: 61 KANSNLAVLNLMARMGSGFDIVSVGELMRVIQAGGDPKKIVFSGVGKTEIEISAALQANI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVES SEL +N A +L KAPI+ R+NP+I+A TH ISTG KE+KFGI I Q Sbjct: 121 MCFNVESISELYRINSVAKALNVKAPISIRINPNIDAGTHPYISTGLKENKFGIEIEQAL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y AS L ++I GVD HIGSQ+ +I F +A L L L G I H+D+GGG Sbjct: 181 DVYKIASDLEFLEIKGVDCHIGSQLTEIAPFIEALDKLLILIDLLAEKGITISHLDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + PP ++Y + I K+I EPGR ++A+ G+LVTKV +K + K Sbjct: 241 LGVPYDDE-TPPEPAEYMTAIINRMAGRSLKLIFEPGRAIMANAGVLVTKVEFLKLNDYK 299 Query: 300 TFVILDVAMNDFMRPTLYDAYH---EINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 F I+D AMND +RP LY A+ +N DR DIVGPICETGDF+ R+ Sbjct: 300 NFAIVDAAMNDLIRPALYSAWQNIIPLNTDYQDGQDRPVRSYDIVGPICETGDFLGKERQ 359 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +A GD L I TGAYG+ S YNSR EI+V+G + I+R R ++L + I Sbjct: 360 LA-LAEGDYLVIRSTGAYGSTMSSNYNSRCRAAEILVDGEKAFIVREREELKDLWRGEHI 418 >gi|73542823|ref|YP_297343.1| diaminopimelate decarboxylase [Ralstonia eutropha JMP134] gi|72120236|gb|AAZ62499.1| diaminopimelate decarboxylase [Ralstonia eutropha JMP134] Length = 419 Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 174/416 (41%), Positives = 252/416 (60%), Gaps = 5/416 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F +G+L AE V L ++A TP Y YS A+ Y ++ A G V YA+KAN Sbjct: 4 FFHRQDGALMAEQVPLAQIAAEFGTPAYVYSRAALTAAYQGYAAACKGRKAQVQYAMKAN 63 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV++ A LG+G DIVS GEL+R LAA ++VFSGVGK E++LAL + CF Sbjct: 64 SNLAVLQVFAKLGAGFDIVSGGELKRVLAAGGDPRKVVFSGVGKNAAEMELALAHDVRCF 123 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A +GK+A ++ R+NPD++A TH ISTG K +KFGI + Y Sbjct: 124 NVESIPELDRLNAVAGQIGKRARVSLRINPDVDAKTHPYISTGLKGNKFGIAFEDVLPTY 183 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LP ++++G+D HIGSQI ++ + +A + D+ + L G ++HIDVGGGLGI Sbjct: 184 RAAAALPNIEVTGIDCHIGSQITEVAPYLEALDKVLDVVEALEREGIVLEHIDVGGGLGI 243 Query: 243 AYHSDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + +L+ + G+ +++ EPGR LV + G+L+T+V +K A K Sbjct: 244 TYTDETPPDITGFATTLLDRVAARGHAHREVLFEPGRSLVGNAGVLLTQVEFLKPGAAKN 303 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y+AYH I + A + DIVGP+CE+GD++ +R +A Sbjct: 304 FCIVDAAMNDLARPAMYEAYHRIEPVK--ANGGSQVVYDIVGPVCESGDWLGRDRALA-V 360 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +PGDLL + GAYG V S YN+R E+MV+G + H++R R ++L + + Sbjct: 361 QPGDLLAVMSAGAYGFVMSSNYNTRPRAAEVMVDGGKVHLVRERELVEDLFRDERL 416 >gi|315178745|gb|ADT85659.1| diaminopimelate decarboxylase [Vibrio furnissii NCTC 11218] Length = 417 Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 183/417 (43%), Positives = 254/417 (60%), Gaps = 4/417 (0%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AENVSL +LA TP Y YS +E+++ F + +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAENVSLAQLAEDYGTPLYVYSRATLERHWHAFDKSVGDHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R +AA ++VFSGVGKT E+ AL I Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSAGELERVVAAGGDPAKVVFSGVGKTAAEMKRALALKI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESESEL+ LNQ A +G KAPI+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESESELERLNQVAGEMGVKAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y A L + I G+D HIGSQ+ IE F A L L L++ G +I+H+DVGGG Sbjct: 181 DVYRLAQRLDHISIHGIDCHIGSQLTAIEPFIDATDRLLALIDNLKAEGIHIKHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + + + ++I EPGR + A+ G+L+T+V +K + K Sbjct: 241 LGVVYRDELPPQPSEYAKALLSRLANHQELELIFEPGRAIAANAGVLLTRVEYLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I + + + D+VGP+CETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVS--PREGAALTYDLVGPVCETGDFLGKDRSL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL + GAYG S YN+R E++V+G H++R R L L+S+ Sbjct: 358 LQQGDLLAVRSAGAYGFAMSSNYNTRTRAAEVIVDGETTHVVRQREELSSLWALESL 414 >gi|170750439|ref|YP_001756699.1| diaminopimelate decarboxylase [Methylobacterium radiotolerans JCM 2831] gi|170656961|gb|ACB26016.1| diaminopimelate decarboxylase [Methylobacterium radiotolerans JCM 2831] Length = 422 Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 219/421 (52%), Positives = 297/421 (70%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE V L LA V TPFYCYST +E++Y F+ AF D +VC+A+K Sbjct: 1 MHHFHYRDGRLHAEEVDLTGLAAEVGTPFYCYSTATLERHYRVFAEAFAADDALVCFAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV++TLA G+G+DIVS GEL+RALAA V +IVFSGVGK+ E++ AL +GI+ Sbjct: 61 ANSNQAVLRTLAARGAGMDIVSGGELQRALAAGVDPGKIVFSGVGKSRAEMEAALTAGIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL L++ AV LG +AP++ RVNPD++A TH KISTGK E+KFGIPI + + Sbjct: 121 CFNVESEPELAVLSEVAVGLGLRAPVSVRVNPDVDAGTHAKISTGKYENKFGIPITRAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+ + GVDMHIGSQI + F A +LL L ++L + GH ++HID GGGL Sbjct: 181 VYAAAAALPGIAVHGVDMHIGSQITDLAPFADAARLLAGLARELLAAGHPLRHIDFGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLI-HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI Y D+ PP + +F L + + E GR +V + GIL+T+V+ +K S + Sbjct: 241 GIPYRDDNAPPPDPAALAATLRPHFAPLGLRPVFEIGRMIVGNAGILLTRVLYVKHSEGR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TFVI+D AMND +RPTLY+AYH + ++ P + + AD+VGP+CE+GD++ALNR++ Sbjct: 301 TFVIVDAAMNDLIRPTLYEAYHGLRPVIEPGPETSRLVADVVGPVCESGDYLALNREMPE 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 RPGDL+ + GAYGAVQS TYN+R L+PE++V G + ++RPR+ LI LD +P W Sbjct: 361 VRPGDLIAVMSAGAYGAVQSCTYNTRPLVPEVLVRGDRAAVVRPRLDVDALIALDRVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|254718034|ref|ZP_05179845.1| diaminopimelate decarboxylase [Brucella sp. 83/13] gi|265982981|ref|ZP_06095716.1| diaminopimelate decarboxylase [Brucella sp. 83/13] gi|306837594|ref|ZP_07470465.1| diaminopimelate decarboxylase [Brucella sp. NF 2653] gi|264661573|gb|EEZ31834.1| diaminopimelate decarboxylase [Brucella sp. 83/13] gi|306407301|gb|EFM63509.1| diaminopimelate decarboxylase [Brucella sp. NF 2653] Length = 421 Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 234/421 (55%), Positives = 313/421 (74%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y G LHAENVSL ++A V TPFY YS IE+++ F +AF MDT+V YALK Sbjct: 1 MNHFEYRNGVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ LA LG+G D VSEGE+RRALAA +PA RIVFSGVGKT E+D AL++ IY Sbjct: 61 ANSNQAVLAALAKLGAGADTVSEGEIRRALAAGIPANRIVFSGVGKTPREMDFALEARIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ L+ RAV+ GK AP++ R+NPD++A TH KISTGK E+KFGIP + + Sbjct: 121 CFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A++LPG+ + G+DMHIGSQI +E F AF L+ +L ++L+++GHNI+H+DVGGGL Sbjct: 181 AYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP YA ++ ++ L K + EPGR +V + G+LVT+VI +K+ K Sbjct: 241 GIPYRTDNTPPPPPVAYAEIVAKHIKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND +RPTLYDA+H+I ++ P + I AD VGP+CETGD++ L+R++A Sbjct: 301 NFVIVDAAMNDLIRPTLYDAFHDIRPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAK 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P PGDL+ I TGAYGAV S TYNSRLLIPE++V+G ++H++RPR T++EL+ LDS+P W Sbjct: 361 PAPGDLIAICTTGAYGAVLSSTYNSRLLIPEVLVDGERYHVVRPRRTYEELLALDSVPDW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|300309533|ref|YP_003773625.1| diaminopimelate decarboxylase [Herbaspirillum seropedicae SmR1] gi|300072318|gb|ADJ61717.1| diaminopimelate decarboxylase protein [Herbaspirillum seropedicae SmR1] Length = 430 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 173/431 (40%), Positives = 249/431 (57%), Gaps = 18/431 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-------- 52 MS F Y G LHAE VSL LA TP Y YS A+ +N+ ++NA Sbjct: 1 MSHFSYRNGVLHAEQVSLATLAEQFGTPLYVYSKAALVENFSAYANACQQAGRADGGKGG 60 Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 +VCY++K+NSN AV+ L LGSG DIVS GEL R +AA A +++FSGVGK DE+ Sbjct: 61 ALVCYSVKSNSNLAVLNLLGRLGSGFDIVSGGELLRVVAAGGDARKVIFSGVGKGRDEMK 120 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 LAL+ I CFNVES E+ LN+ A +LGK+A I+ RVNP+++A TH ISTG KE+KFG Sbjct: 121 LALEHDILCFNVESIPEVARLNEVAGALGKRARISLRVNPNVDAKTHPYISTGLKENKFG 180 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + Y A+ LP +++ G+D HIGSQ+ +A + D+ L + G I Sbjct: 181 VAYEDALNCYRAAAALPHIEVVGIDCHIGSQLLDDSPLLEALDKIIDMVDALEAEGIPIH 240 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGI 285 H+D+GGG+GI Y + A + +++ EPGR +V + G+ Sbjct: 241 HLDIGGGIGIRYDDEQPVAIGDYLARVFARVDAWRASKYQGRPIQVMFEPGRSVVGNAGL 300 Query: 286 LVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 L+T+V +K K F ++D AMND MRP +Y+A+H + + AG D+VGP+C Sbjct: 301 LLTEVQYLKHGEGKNFAVVDAAMNDLMRPAMYEAWHGVKTVKENAGQPR--IYDVVGPVC 358 Query: 346 ETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 E+GD++A +R++A GDLL + GAYG + YN+R E++V+G + H+IR R Sbjct: 359 ESGDWLARSRELA-IGEGDLLALMSAGAYGMTMASNYNTRGRAAEVLVDGERAHLIRARE 417 Query: 406 TFQELIELDSI 416 +L L+ I Sbjct: 418 NPADLFALEKI 428 >gi|254515502|ref|ZP_05127562.1| diaminopimelate decarboxylase [gamma proteobacterium NOR5-3] gi|219675224|gb|EED31590.1| diaminopimelate decarboxylase [gamma proteobacterium NOR5-3] Length = 414 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 174/416 (41%), Positives = 254/416 (61%), Gaps = 5/416 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y + L AE+V E LA TP Y YS A+E + A G + +VCYA+KAN Sbjct: 2 AFTYRKQHLFAEDVDCEALAQQYGTPCYVYSRKAMESALEEYHKALKGCEHLVCYAVKAN 61 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+ LA G+G DIVS GEL R +AA ++VFSGV K DE+ ALQ GI CF Sbjct: 62 SNIAVLDILARCGAGFDIVSVGELERVIAAGGDPGKVVFSGVVKRPDEMRRALQVGIRCF 121 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL+ L A L +AP++ RVNPD++A TH ISTG +E+KFG+ +L Sbjct: 122 NVESEAELEVLQAVAAQLQVQAPVSVRVNPDVDAGTHPYISTGLRENKFGVATDAAMALL 181 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A TL + ++G+D HIGSQ+ + A + L + L + G +I+H+D+GGG+G+ Sbjct: 182 RRAKTLSNIDVTGLDCHIGSQLIDMSPLLDALQQLLLMVDTLEAEGIHIRHLDLGGGIGV 241 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + +PP+ +DY + + + G+ ++ EPGR +VA+ G+L+T+V +K++ +F Sbjct: 242 RYRDE-QPPAVADYIAAVREALGDRDLALVFEPGRSIVANAGVLLTRVHYLKETDAHSFA 300 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 ++D AMNDF+RP LY A+ +I D ++VGP+CETGDF+ +R++A P Sbjct: 301 LVDAAMNDFIRPALYQAWVDIQPTG--PSDAEPRLWNVVGPVCETGDFLGKDRELA-IAP 357 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 LL I GAYG V S YN+R E+M++G H+IR R T ++L+ + +P Sbjct: 358 DTLLAIHGAGAYGFVMSSNYNTRPRAAEVMIDGDSAHLIRERETIEDLLRGEHRLP 413 >gi|84515838|ref|ZP_01003199.1| diaminopimelate decarboxylase [Loktanella vestfoldensis SKA53] gi|84510280|gb|EAQ06736.1| diaminopimelate decarboxylase [Loktanella vestfoldensis SKA53] Length = 422 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 206/421 (48%), Positives = 290/421 (68%), Gaps = 1/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G+L+AE+V++ +A V TPFY YST + +++ F A D +VC+A+K Sbjct: 1 MDHFLYRNGALYAEDVAIADIAAAVGTPFYVYSTATLTRHFQLFDEALGFADHLVCFAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN AV++ LA G+G+D+VS GE RA AA VP +RIVFSGVGKT DE+ +ALQ GI Sbjct: 61 SLSNIAVLRVLAQAGAGMDVVSGGEYLRAKAAGVPGDRIVFSGVGKTADEMRMALQGGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE E+ L+ A SLGK API R+NPD++A TH KI+TGK E+KFGIPI + Sbjct: 121 QFNVESEPEMVALDAVARSLGKIAPITLRINPDVDAKTHAKIATGKSENKFGIPISRARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+TL G+K+ G+D+HIGSQ+ ++ F A+ + +LT+ LR++GH I +D+GGGL Sbjct: 181 VYALAATLKGLKVVGIDVHIGSQLTELAPFEAAYAKVAELTEVLRADGHQITRLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 S+ PP SDY ++I + G+L C+I +EPGR + + G++V++VI +K D+ Sbjct: 241 GIPYERSNAAPPLPSDYGAMIERTLGHLGCEIEIEPGRLISGNAGLMVSQVIYVKSGEDR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+ILD AMND +RP +YDA+H+I +V PA DIVGP+CE+GD A R++A Sbjct: 301 DFLILDGAMNDLIRPAMYDAWHDIIPVVEPAPGTEPARYDIVGPVCESGDTFAKAREVAP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 +PGDL+ GAYGAV + YNSR LIPE++V+G QF +IR R +++E+I DS+P W Sbjct: 361 MQPGDLVAFRSAGAYGAVMASEYNSRPLIPEVLVHGDQFAVIRKRPSYEEMIARDSLPEW 420 Query: 420 L 420 L Sbjct: 421 L 421 >gi|304309745|ref|YP_003809343.1| Diaminopimelate decarboxylase (DAP decarboxylase) [gamma proteobacterium HdN1] gi|301795478|emb|CBL43676.1| Diaminopimelate decarboxylase (DAP decarboxylase) [gamma proteobacterium HdN1] Length = 422 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 202/423 (47%), Positives = 271/423 (64%), Gaps = 10/423 (2%) Query: 1 MSA-FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS+ F Y LHAE V+L +LA V TP Y YS +AIE+ +L F AF +VC+A+ Sbjct: 1 MSSAFHYQNHELHAEQVNLTQLAEQVGTPAYVYSRSAIEQQWLAFDRAFGAHPHLVCFAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AV+ LA LG+G DIVSEGEL R L A +++VFSGVGK E+ AL G+ Sbjct: 61 KANSNIAVLNLLARLGAGFDIVSEGELERVLRAGGDPKKVVFSGVGKQPAEMARALTVGV 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESESEL TLNQ A +LG KAP++ RVNPD++A TH ISTG KE+KFGI I + Sbjct: 121 RCFNVESESELHTLNQVAATLGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIDIDRAL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y AS LP + I GVD HIGSQ+ Q+ F A + L L++ G ++H+D+GGG Sbjct: 181 QVYRDASELPHINIVGVDCHIGSQLTQLAPFLDALDRVLVLVDALKAEGIALRHLDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYAS------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 LG+ Y + +PPS SDY H FG +IILEPGR +VA+ G+L+T+++ + Sbjct: 241 LGVCYR-NEQPPSPSDYVQALLTRLGQHPEFGKQGIEIILEPGRAIVANAGVLLTRIMGL 299 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K++ + F I+D AMND +RP LY A+ EI V D DIVGP+CETGDF+ Sbjct: 300 KETPARKFAIIDGAMNDLIRPALYGAWQEIV-AVKERQDSPEATYDIVGPVCETGDFLGK 358 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 R + + GDLL ++ GAYG V S YN+R E++V+ QFHI+R R ++ ++L Sbjct: 359 ERAL-RIQQGDLLAVKSAGAYGFVMSSNYNTRNRAAEVIVDKEQFHIVRARESYDYQLQL 417 Query: 414 DSI 416 +S+ Sbjct: 418 ESL 420 >gi|118602155|ref|YP_903370.1| diaminopimelate decarboxylase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567094|gb|ABL01899.1| diaminopimelate decarboxylase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 415 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 178/413 (43%), Positives = 253/413 (61%), Gaps = 3/413 (0%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F Y L+AE+V++ L ++P Y YS T IE N+ F AF +VCYA+KANS Sbjct: 3 FSYKNHILYAESVAITDLIDAYESPLYVYSRTDIENNWYEFDQAFGTHPHLVCYAVKANS 62 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N AV+ L+ +GSG DIVS GEL R L A A R VFSGV KT EI AL+ GI+CFN Sbjct: 63 NLAVLNVLSKIGSGFDIVSIGELERVLFAGADASRCVFSGVAKTKFEIKRALEVGIFCFN 122 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 VES +E+ + Q A +G +A I+ R+NP+++A TH ISTG KE+KFG+ I + +Y Sbjct: 123 VESMAEMNRIEQVAKDMGTQAQISLRINPNVDAKTHPYISTGLKENKFGVDIDDVVPIYR 182 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A P + + G++ HIGSQ+ ++ F A + +L +L I H+D+GGG+GI Sbjct: 183 MAHNSPYLAVKGLNCHIGSQLVEVSPFLDALDKVLELVAKLDKINIRITHLDLGGGIGIK 242 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 Y+++ ++ AS++ + KIILEPGR +V + G+ VTKV +K+++DK+F I Sbjct: 243 YNNEQIIDINAYIASILDKV-KMNDLKIILEPGRAVVGNAGVFVTKVEFLKQNSDKSFAI 301 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D AMND +RP Y + VN + + D+VGPICETGDF+A NRK++ G Sbjct: 302 IDGAMNDLLRPAFYQ-TYHQVLPVNENAKGVDANWDLVGPICETGDFLAKNRKLS-LSEG 359 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 D L + TGAYG S YNSR + E+MV+G+Q ++R R T Q+L + I Sbjct: 360 DYLALMSTGAYGFTMSSNYNSRPRVAEVMVSGNQHTLVRERETIQDLFNKEHI 412 >gi|254282311|ref|ZP_04957279.1| diaminopimelate decarboxylase [gamma proteobacterium NOR51-B] gi|219678514|gb|EED34863.1| diaminopimelate decarboxylase [gamma proteobacterium NOR51-B] Length = 417 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 178/417 (42%), Positives = 254/417 (60%), Gaps = 5/417 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y LH E+V++ +A V TP Y YS IE + + +A ++CYA+KAN Sbjct: 2 AFTYKNDVLHCEDVAISTIAEQVGTPVYVYSRADIEAAFGEYQSALANRPHLICYAVKAN 61 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+ LA LG+G DIVSEGEL R +AA ++VFSGVGK+ + I AL +GI CF Sbjct: 62 SNLAVLNLLARLGAGFDIVSEGELARVIAAGGDPSKVVFSGVGKSCEGIRQALDAGIRCF 121 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL LN+ A GK AP++ RVNPD++ANTH ISTG KE+KFG+ I + LY Sbjct: 122 NVESEAELNVLNEIAAECGKVAPVSLRVNPDVDANTHPYISTGLKENKFGVDIERAKDLY 181 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ + ++ GVD HIGSQ+ I F A L L L S+G ++H+D+GGGLG+ Sbjct: 182 EQAAAMSFIEPVGVDCHIGSQLLSITPFIDAVDRLLALVDALESSGITLKHLDLGGGLGV 241 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + + P+ S Y + + G+ + ++I EPGR +VA G LVT+V +K + + F Sbjct: 242 QYGEE-QAPAISAYIAALTDRLGDREFELIFEPGRSVVAMAGALVTRVNYLKPTEHRNFA 300 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 ++D AMND +RP LYDA+ +I D+VGP+CETGDF+ +R++A +P Sbjct: 301 LVDAAMNDLIRPALYDAWMDILPATQRHDTA--HRWDVVGPVCETGDFLGKDRELA-LQP 357 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS-IPA 418 DLL + GAYG V + YN+R E++V+ H++R R + L ++ +P Sbjct: 358 DDLLVVTGAGAYGFVMASNYNTRPRPAEVVVDKGTLHVVRQREALESLWAGETCLPE 414 >gi|296122026|ref|YP_003629804.1| diaminopimelate decarboxylase [Planctomyces limnophilus DSM 3776] gi|296014366|gb|ADG67605.1| diaminopimelate decarboxylase [Planctomyces limnophilus DSM 3776] Length = 447 Score = 304 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 160/421 (38%), Positives = 242/421 (57%), Gaps = 8/421 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y +G L E + + ++A TP + YS + AF ++ ++C+++K Sbjct: 24 MNPFQYRDGELFCEEIPVSRIARDFGTPCWIYSKAMLLHQLGQIQQAFAAVNPVICFSVK 83 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN ++K + GS D+VS GEL R A ++VF+GVGKT EI LAL++ I Sbjct: 84 ANSNLGILKVMRDAGSSFDVVSGGELYRVKKAGADTAKVVFAGVGKTDAEIQLALENQIL 143 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F+VESE EL + A +G AP+A R+NPDI+A TH K +TGKK +KFG+ I ++ Sbjct: 144 MFDVESEPELDAIAAVAEKMGVIAPVALRLNPDIDAKTHAKTTTGKKGNKFGMDIERVFE 203 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L P +K+ G+ MH+GS I E + A + ++T+ LR+ GH I +++GGG Sbjct: 204 LADKVLKTPRLKLVGIHMHLGSPILTTEPYELAGQKAIEVTRDLRARGHEIGWVNLGGGF 263 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI+Y P+ S+YA +I + ++ LEPGRF+ + GILV++V+ K+ K Sbjct: 264 GISYRGSEGLPA-SEYAKVIVPAVQEMGVQLALEPGRFITGNAGILVSEVVYTKREGGKL 322 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH-------IHADIVGPICETGDFIAL 353 FVI D AMND MRP +YDA+H+I + A + D+VGP+CE+GD+ A Sbjct: 323 FVIQDAAMNDLMRPAMYDAFHKIWPVKAAAEPANYEGKIEGCEACDVVGPVCESGDYFAK 382 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 R + + GDL+ I GAYG S YNSR E++V+ ++R R T+ +LI Sbjct: 383 GRYLPPVQRGDLISIFSAGAYGTSMSSNYNSRPRAVELLVDQGHVQVVRRRETYDDLIAA 442 Query: 414 D 414 + Sbjct: 443 E 443 >gi|319789610|ref|YP_004151243.1| diaminopimelate decarboxylase [Thermovibrio ammonificans HB-1] gi|317114112|gb|ADU96602.1| diaminopimelate decarboxylase [Thermovibrio ammonificans HB-1] Length = 419 Score = 304 bits (777), Expect = 3e-80, Method: Composition-based stats. Identities = 177/412 (42%), Positives = 244/412 (59%), Gaps = 2/412 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 + G L+ E + ++A TP Y YS A + F++AF ++ C+A+KAN Sbjct: 9 FIELRNGELYIEELPALEIAEKFSTPAYVYSANAFRWWFNEFNSAFSQVEHTTCFAVKAN 68 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN V+K LA LG+G D VS GE+ RAL A + ++IVF+GVGK DEI+ AL+ I Sbjct: 69 SNVWVLKLLAELGAGADTVSAGEIHRALTAGISPKKIVFAGVGKRPDEIEFALERDILMI 128 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESESEL+T+N+ LGKKAPIA RVNP+++ TH ISTG E KFG+ + LY Sbjct: 129 NVESESELETVNRVGEKLGKKAPIALRVNPEVDPKTHPYISTGLHEAKFGVDYERAVELY 188 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A + V G+ HIGSQI +F +A + + +L ++L S G ++ D GGGLG+ Sbjct: 189 KKAKEMKWVNPVGIHFHIGSQITDTSAFGEAAEKVAELVKELHSLGIEVELFDAGGGLGV 248 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y+ P S + A + L CK+ILEPGR + A+ G+L+TK++ IK+ +KTF Sbjct: 249 NYNPQEPPVPSEELAKQLIPAVKELGCKLILEPGRRISANAGVLLTKLLYIKRRPNKTFY 308 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D MND RP LY AYH I +VN R D+VGPICETGD +A R++ Sbjct: 309 IVDAGMNDLARPALYGAYHHIVPVVN--KGRKTETVDVVGPICETGDILAKGRELPECSE 366 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GD+L + GAYG + YNSR PEI+V GS +IR R T +L+ + Sbjct: 367 GDILAVLSAGAYGFTMASNYNSRPRPPEILVEGSSTRVIRQRETISDLLARE 418 >gi|323143200|ref|ZP_08077896.1| diaminopimelate decarboxylase [Succinatimonas hippei YIT 12066] gi|322417041|gb|EFY07679.1| diaminopimelate decarboxylase [Succinatimonas hippei YIT 12066] Length = 416 Score = 304 bits (777), Expect = 3e-80, Method: Composition-based stats. Identities = 173/416 (41%), Positives = 253/416 (60%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y L+AE++++ LA +P Y YS + ++ F A ++CYA+K Sbjct: 1 MDFFNYKNNELYAEDLAVTDLADQYGSPLYIYSKATLVRHMNAFKEALAKKRHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANS+ +++ +A LG+G D+VSEGELRR + A +++VFSGVGKT EI AL+ GI Sbjct: 61 ANSSLSILALMASLGAGFDVVSEGELRRVIKAGGDPKKVVFSGVGKTAHEIAFALEQGID 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES E+ ++ A SLGKKA ++ RVNP+++A TH ISTG K +KFGI + + Sbjct: 121 CFNIESVPEINAISSVAKSLGKKARVSVRVNPNVDAKTHPSISTGLKSNKFGIAYDEALA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y + P ++I G+D HIGSQ+ +A + L DL ++L G I HID+GGGL Sbjct: 181 VYRQMAADPNLEICGIDCHIGSQMTSGAPILEATERLLDLYKELTECGIKIDHIDIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PPS +Y S + +L I +EPGR +VA+ GILVTK + +KK + K Sbjct: 241 GVTYGDE-TPPSPYEYMSAVINRLKDLDISIYVEPGRAMVANAGILVTKALYLKKGSVKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+++ I + D D+VGP+CE+ DF+ RK+A Sbjct: 300 FCIVDAGMNDLIRPALYNSWMNIVEVKKHQ-DAKVDLYDVVGPVCESDDFLGKERKLA-V 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 G+ L + GAYG+ S YNSRLL EI+V+ ++ ++IR R F +L E +SI Sbjct: 358 SAGEYLAVRGAGAYGSSMSSNYNSRLLCAEILVDKNKSYVIRKRQDFSQLWENESI 413 >gi|50085728|ref|YP_047238.1| diaminopimelate decarboxylase [Acinetobacter sp. ADP1] gi|49531704|emb|CAG69416.1| diaminopimelate decarboxylase [Acinetobacter sp. ADP1] Length = 416 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 183/416 (43%), Positives = 260/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE SL++LA TP Y YS A EK+Y AFD +D +C+A+K Sbjct: 1 MS-FSRINGVLHAEQCSLDQLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LGSG DIV+ GEL R LAA +IVFSG+GK+ +I AL+ GI Sbjct: 60 SNSNLAVLNVLAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL + + AV L +KAP++ RVNPD++A TH ISTG KE+KFGIP + Sbjct: 120 CFNVESYAELDRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFE 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++L + + G+D HIGSQ+ + + F A + + +QL G N++HID+GGGL Sbjct: 180 TYQYAASLSHLDVVGIDCHIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGL 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PPS ++YA+ + L K+ +EPGR + A+ G+L+T+V +K + + Sbjct: 240 GVCYKDE-TPPSVAEYANALKPALEKLGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP+LY+A+ + VN + D+VG ICETGDF+ R +A Sbjct: 299 FAIIDAAMNDLIRPSLYEAWMD-IQSVNESTSAEAKEWDVVGAICETGDFLGKARTLA-I 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + D+L + GAYG V S YN+R E+MV+ + H+IR R + + L E + + Sbjct: 357 QENDILAVLGAGAYGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIESLWERERL 412 >gi|329890871|ref|ZP_08269214.1| diaminopimelate decarboxylase [Brevundimonas diminuta ATCC 11568] gi|328846172|gb|EGF95736.1| diaminopimelate decarboxylase [Brevundimonas diminuta ATCC 11568] Length = 424 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 183/426 (42%), Positives = 261/426 (61%), Gaps = 8/426 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-----TMV 55 M F +G LHAE VSLE LA V TP Y YS+ + ++Y A D ++ Sbjct: 1 MHHFDLKDGVLHAEGVSLEALAETVGTPTYVYSSATLRRHYGLLREACDAHKDALGEALI 60 Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 +A+KANSN +V+ TLA LG G D VSEGE+RRALAA VP ERI+FSGVGKT E+ A+ Sbjct: 61 AFAVKANSNLSVLATLAKLGCGADTVSEGEIRRALAAGVPGERIIFSGVGKTDAELAFAI 120 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 G+ NVES +EL L A + G A RVNP I A H KI+TG DKFG+P+ Sbjct: 121 DVGVRQINVESSAELDRLIAVAAAKGAAPATAIRVNPKIGAGGHAKITTGGAGDKFGVPV 180 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 + +LYA AS P V G+ HIGSQI + AF++LR +T+ LR+ GH+I +D Sbjct: 181 EEAMALYARASASPHVTPVGLACHIGSQITDLAPLEAAFRVLRQMTEDLRAQGHSITRLD 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-ISIK 294 +GGGLG+ Y+ + PS +DY ++ + L + EPGR + A+ G+L+++V + Sbjct: 241 LGGGLGVPYYGETATPSPADYVAMAARVLDGLNVEAAFEPGRLMAANAGVLLSRVIQVNE 300 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 ++ + F++LD AMND MRP LYDA+H++ + + + D+VGP+CETGD A + Sbjct: 301 RTDGRRFLVLDAAMNDLMRPALYDAFHDLKPVRPV--EGAALPYDVVGPVCETGDTFARD 358 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R + + GDL+ GAYGAV SG YN+R L E++V+G ++ +IRPR T++++ + Sbjct: 359 RDLPPLKAGDLVVFMSAGAYGAVMSGEYNTRPLAAEVLVDGERYAVIRPRPTYEQMFARE 418 Query: 415 SIPAWL 420 + WL Sbjct: 419 PMADWL 424 >gi|195952897|ref|YP_002121187.1| diaminopimelate decarboxylase [Hydrogenobaculum sp. Y04AAS1] gi|195932509|gb|ACG57209.1| diaminopimelate decarboxylase [Hydrogenobaculum sp. Y04AAS1] Length = 420 Score = 303 bits (775), Expect = 4e-80, Method: Composition-based stats. Identities = 172/408 (42%), Positives = 244/408 (59%), Gaps = 3/408 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 Y E L ENV LE+LA TP Y YS + I+ + AF D YALKAN Sbjct: 8 YLDYKEDKLFLENVDLEELAKEFGTPLYVYSASYIKDKAKAYKEAFKDTDF--HYALKAN 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 N ++IK L G G DIVS GELR+A+ A + A +IV++GVGKT++E+ A+++ I F Sbjct: 66 GNLSIIKLLKDEGFGADIVSGGELRKAIKAGIEASKIVYAGVGKTMEELKAAVEAEIKMF 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A +LGKKA +A RVNPD++ TH ISTG K+ KFG+ I + Y Sbjct: 126 NVESSIELDILNDIAKNLGKKANVAIRVNPDVDPKTHPYISTGMKKSKFGVDIKTAYKEY 185 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 YA +L + + G+ HIGSQ+ + + +A + +R+L +L +G +I++ID+GGGLGI Sbjct: 186 QYAKSLKHLNVIGIHCHIGSQLLDVSPYIEASEKVRELYDKLVKDGFDIKYIDMGGGLGI 245 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + + P D ++ F +++ ++ LEPGR +V + GIL+T+V +K K FV Sbjct: 246 KYKPEEQEPHPKDLKEALYPAFKDIKARLCLEPGRSMVGNAGILITEVQFLKDKGHKHFV 305 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D MND +RP++Y AYH I N I DIVGPICETGDF+A +R+I Sbjct: 306 IVDAGMNDLIRPSIYGAYHHIVPTHN-KYKEDFIKTDIVGPICETGDFLAQDREIHKVDR 364 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 GD L + GAYG S YN R E+++ ++ +IR R T+ + Sbjct: 365 GDYLAVLSAGAYGFSMSSHYNIRPRAAEVLIENGKYRLIRSRETYDYI 412 >gi|254447342|ref|ZP_05060808.1| diaminopimelate decarboxylase [gamma proteobacterium HTCC5015] gi|198262685|gb|EDY86964.1| diaminopimelate decarboxylase [gamma proteobacterium HTCC5015] Length = 418 Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats. Identities = 182/409 (44%), Positives = 254/409 (62%), Gaps = 4/409 (0%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G L + VSL+++A TP Y YS IE + + A ++CYA+KANSN V Sbjct: 13 DGELCIDGVSLKRIASTYGTPAYVYSRQHIESAWRAYDEALGSWPHLICYAVKANSNLGV 72 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + LA LG+G DIVS GEL R L A A+ IVFSGVGKT +E+ AL GI CFNVES Sbjct: 73 LSVLAKLGAGFDIVSGGELERVLRAGGEAKNIVFSGVGKTAEEMRRALDVGIRCFNVESH 132 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 +EL LN+ A +GK API+ RVNPD++A TH ISTG KE+KFG+ + Q ++Y A Sbjct: 133 AELLRLNRVAEEMGKTAPISLRVNPDVDAQTHPYISTGLKENKFGVAVDQALAVYREADA 192 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 LP + I G+D HIGSQ+ I+ F A K + L QL + I H+D+GGGLGI Y + Sbjct: 193 LPNIAIHGLDCHIGSQLTTIDPFVDALKRVLALVDQLAAEDIEIHHLDLGGGLGICYRDE 252 Query: 248 HRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 +PP+ ++ + G + +++ EPGR +V + G+L+T+V +K S DK F I+D A Sbjct: 253 -QPPAVAELMQALTNTLGERRFELLFEPGRSIVGNAGVLLTQVEYLKHSDDKNFAIVDAA 311 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 MND MRP+LY A+ I+ + G+ DIVGPICETGDF+ +R++ + GDLL Sbjct: 312 MNDLMRPSLYSAWQAIDAVEQREGNA--KPYDIVGPICETGDFLGKDREL-VLEEGDLLA 368 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 ++ GAYG + YN+R E+MV+ +IR R TF++LIE + + Sbjct: 369 VQSCGAYGFTMASNYNTRPRAVELMVDAGDIKVIRQRETFEQLIEGEQV 417 >gi|209693748|ref|YP_002261676.1| diaminopimelate decarboxylase [Aliivibrio salmonicida LFI1238] gi|208007699|emb|CAQ77810.1| diaminopimelate decarboxylase [Aliivibrio salmonicida LFI1238] Length = 417 Score = 302 bits (774), Expect = 6e-80, Method: Composition-based stats. Identities = 189/417 (45%), Positives = 254/417 (60%), Gaps = 4/417 (0%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE + +LA TP Y YS +E+++ F ++ +VCYA+ Sbjct: 1 MDYFNYKDDGQLWAEERPITQLAEQYGTPLYVYSRATLERHWNAFDSSVGEQPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ LA LGSG DIVS+GEL R +AA ++VFSGVGKT E+ AL+ I Sbjct: 61 KANSNIGVLNALACLGSGFDIVSQGELERVVAAGGDPTKVVFSGVGKTAKEMRRALELNI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN A +G API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNAVAEEMGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y +A TLP + I G+D HIGSQ+ I F A L L L++ G NI+H+DVGGG Sbjct: 181 EVYKFAQTLPNLNIQGIDCHIGSQLTDITPFIDATDRLLALIDDLKAQGVNIRHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P S +L+ + G ++I EPGR + A+ GILVTKV +K + K Sbjct: 241 LGVVYRDELPPQPSEYATALLSRLTGREDLELIFEPGRAIAANAGILVTKVEFLKHTEHK 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND MRP LY A+ +I +V G+ D+VGPICETGDF+ +R + + Sbjct: 301 NFAIIDAAMNDLMRPALYQAWQDIVPVVPREGEA--QSYDLVGPICETGDFLGKDRDL-V 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 DLL + +GAYG V S YN+R EIMV+G Q H++R R L EL+SI Sbjct: 358 LEANDLLAVRSSGAYGFVMSSNYNTRTRAAEIMVDGDQVHLVRKREELSSLWELESI 414 >gi|149908508|ref|ZP_01897170.1| diaminopimelate decarboxylase [Moritella sp. PE36] gi|149808342|gb|EDM68279.1| diaminopimelate decarboxylase [Moritella sp. PE36] Length = 418 Score = 302 bits (774), Expect = 6e-80, Method: Composition-based stats. Identities = 188/417 (45%), Positives = 259/417 (62%), Gaps = 4/417 (0%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE ++ +A TP Y YS IE+++ F++A +VCYA+ Sbjct: 1 MDYFNYQDDGQLFAEQCAVADVADKFGTPTYVYSRATIERHWHAFNDAAGAHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AV+ LA LGSG DIVS GEL R +AA +IVFSGVGKT+ EI+LAL I Sbjct: 61 KANSNIAVLNVLARLGSGFDIVSGGELLRVIAAGGDPSKIVFSGVGKTVAEINLALDHNI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 +CFNVES EL+ +N A+S G +API+ RVNP+I+A TH ISTG KE+KFGI I Sbjct: 121 HCFNVESTPELERINDIALSRGVQAPISIRVNPNIDAGTHPYISTGLKENKFGIDIDLAE 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +Y AS +PG+K+ GVD HIGSQ+ ++ F A L L +L + G ++H+DVGGG Sbjct: 181 GVYQVASKMPGIKLKGVDCHIGSQLTELSPFLDAVDKLLLLIDKLSAQGIVLEHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y+ + PP ++YA + + +I EPGR ++A+ GILV+KV IK + K Sbjct: 241 LGVPYNGE-TPPQPAEYAQALKAKLAGRKLALIFEPGRAIMANAGILVSKVEYIKLTEHK 299 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND +RP LY A+ VN + +R ++ D+VGPICETGDF+ NR + Sbjct: 300 NFAIVDAAMNDLIRPALYSAWQ-AIAPVNKSLERECLNYDVVGPICETGDFLGKNRDL-T 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 D + + GAYG+ S YNSR E+MV+G H++R R E+ + ++I Sbjct: 358 IAMDDYIVVRSAGAYGSTMSSNYNSRSRPAEVMVDGDVAHLVRRREGLAEIWKDEAI 414 >gi|148244272|ref|YP_001218966.1| diaminopimelate decarboxylase [Candidatus Vesicomyosocius okutanii HA] gi|146326099|dbj|BAF61242.1| diaminopimelate decarboxylase [Candidatus Vesicomyosocius okutanii HA] Length = 413 Score = 302 bits (773), Expect = 7e-80, Method: Composition-based stats. Identities = 181/411 (44%), Positives = 251/411 (61%), Gaps = 5/411 (1%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F Y LHAE+V++ L +P Y YS T IE N+ FS+AF +VCYA+KANS Sbjct: 3 FSYQNHILHAESVAIADLMKTYGSPLYVYSRTDIEYNWHLFSHAFGIHPHLVCYAVKANS 62 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N AV+ LA +GSG D+VS GEL R L A A R VFSGV KT EI AL+ GI+CFN Sbjct: 63 NLAVLSVLAKIGSGFDVVSNGELERILLAGADASRCVFSGVAKTNIEIKRALEVGIFCFN 122 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 VES +E+ + Q A + +API+ RVNPD++A TH ISTG KE+KFG+ I +Y Sbjct: 123 VESMAEMIRIEQVAKEMSMQAPISLRVNPDVDAKTHPYISTGLKENKFGVDIDDAIPIYK 182 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A P +K+ G+D HIGSQ+ +I F A + +L +L ++ H+D+GGG+GI Sbjct: 183 MAYNSPYLKVKGIDCHIGSQLTKISPFLDALDKVLELVAKLGKLNIHVTHLDLGGGVGIK 242 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 Y ++ + A + KIILEPGR +V + GI VTKV +K+++DK+F I Sbjct: 243 YDNEQTIDIN---AYISSILDKVGSLKIILEPGRAIVGNAGIFVTKVEFLKQNSDKSFAI 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D AMND +RP+ Y + ++ + + H D+VGPICETGDF+A NR+++ G Sbjct: 300 IDGAMNDLLRPSFYQ-AYHQVLPIDENAEGIDAHWDLVGPICETGDFLAKNRRLS-LSEG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 D L + GAYG+ S YNSR + E+MV GSQ+ ++R R T Q+L + Sbjct: 358 DYLALMSAGAYGSTMSSNYNSRPRVAEVMVLGSQYTLVRERETIQDLFNKE 408 >gi|325123129|gb|ADY82652.1| diaminopimelate decarboxylase [Acinetobacter calcoaceticus PHEA-2] Length = 415 Score = 302 bits (772), Expect = 9e-80, Method: Composition-based stats. Identities = 194/416 (46%), Positives = 268/416 (64%), Gaps = 5/416 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE S+E+LA TP Y YS A EKNYL AFD +D +C+A+K Sbjct: 1 MS-FTRINGVLHAEQCSMEQLAQQFGTPLYVYSKAAFEKNYLDMDRAFDFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LG G DIVS GEL R L A A ++VFSG+GKT +I+++L GI Sbjct: 60 SNSNIAVLNVLAKLG-GFDIVSGGELARVLKAGGDASKVVFSGLGKTEADIEISLNVGIA 118 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL L + A LGKKAPI+ RVNPD++A TH ISTG KE+KFGIP ++ Sbjct: 119 CFNVESYAELDRLQKVAARLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYE 178 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++LP ++I G+D HIGSQ+ + + F A + + ++L+ G ++HID+GGGL Sbjct: 179 TYQYAASLPNLEIIGIDCHIGSQLTETKPFVDALDRVMLMIEELKKLGITLKHIDIGGGL 238 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PPS +YA+ + L K+ +EPGR + A+ G+L+TKV +K ++ + Sbjct: 239 GVCYKDE-TPPSVEEYANSMKPALEKLGLKVYMEPGRSISANAGVLLTKVDLLKPTSHRN 297 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+ +I +V P+ D D+VG ICETGDFI +R +A Sbjct: 298 FAIIDAAMNDLIRPALYEAWMDIQPVV-PSSDTEEKTWDLVGAICETGDFIGKDRSLA-L 355 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + DLL + GAYG V S YN+R E+MV+G + H+IR R T + L E + + Sbjct: 356 KENDLLAVLGAGAYGFVMSSNYNTRGRAAEVMVSGDKAHLIRERETVESLWEKERL 411 >gi|225848225|ref|YP_002728388.1| diaminopimelate decarboxylase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643357|gb|ACN98407.1| diaminopimelate decarboxylase [Sulfurihydrogenibium azorense Az-Fu1] Length = 420 Score = 302 bits (772), Expect = 9e-80, Method: Composition-based stats. Identities = 176/413 (42%), Positives = 249/413 (60%), Gaps = 3/413 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 F Y +G L+ E+V+++ LA + TPFY YS AI + AF T++CYALKA Sbjct: 7 DYFVYKDGKLYCEDVNIQNLASKIGTPFYIYSKKAIIDKINEYKEAFKDYPTLICYALKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN +++K G G DIVS GEL +A +P+ +IV++GVGKT EI A+ I Sbjct: 67 NSNLSILKIFEEHGLGADIVSGGELYKARKVGIPSNKIVYAGVGKTDVEIIYAINENILS 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVES+ EL+ +N+ A KKA I+ R+NPD++ TH ISTG K+ KFGI I Q + Sbjct: 127 FNVESQMELEVINEIAKRQNKKANISIRINPDVDPKTHPYISTGLKKSKFGIDIGQALDV 186 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A + + + G+ HIGSQI + + +A + DL +L+ G +Q ID+GGGLG Sbjct: 187 YKQAVKMENLNVVGIHCHIGSQIMDVSVYKEAVEKTVDLVFKLKKEGIELQFIDIGGGLG 246 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + Y+ + PP++ D A+ + K+I+EPGR L+A G L+TKVI K DK F Sbjct: 247 VKYYPEDNPPTAFDLANTVLPIVKQTGLKLIIEPGRSLIAQAGALITKVIFTKDKKDKHF 306 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 VI+D MND +RP++Y+AYH I + + + ADIVGPICETGDF L+R+I Sbjct: 307 VIVDSGMNDLIRPSIYNAYHHIITVEE---KQEKMVADIVGPICETGDFFGLDREIGKVN 363 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GDLL I GAYG+ + YN R EI+V+G +F II+ R + + +L+ Sbjct: 364 RGDLLAILTAGAYGSSMASNYNVRPKAIEILVDGDKFKIIKEREDYSFITKLE 416 >gi|127511256|ref|YP_001092453.1| diaminopimelate decarboxylase [Shewanella loihica PV-4] gi|126636551|gb|ABO22194.1| diaminopimelate decarboxylase [Shewanella loihica PV-4] Length = 414 Score = 302 bits (772), Expect = 9e-80, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 265/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + L+AE ++ LA TP Y YS +E+++ F NA M+CYA+K Sbjct: 1 MDHFLYQQDELYAEQCTVASLAETYGTPLYVYSRATLERHWHAFDNAVADHPHMICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ LA LGSG DIVS GEL R L A A ++VFSGVGKT+ E+++AL++GIY Sbjct: 61 ANSNLAVLNVLARLGSGFDIVSGGELARVLEAGGEASKVVFSGVGKTVAEMEMALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A+ LGK AP++ RVNPD++A TH ISTG KE+KFGI + + + Sbjct: 121 CFNVESAAELEQLNLVALRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMEEAEA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++ A+ LPG+ + G D HIGSQ+ +++ F A + L +L G I H+DVGGGL Sbjct: 181 IFLRANELPGLAVKGADCHIGSQLTELQPFLDAMDRMLALIDRLAEQGVKIAHLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +PP S YAS + K+I EPGR + A+ GI VT+V+ +K++A+K Sbjct: 241 GVTYDGE-QPPEPSAYASALLGKLAGRDLKLIFEPGRAIAANAGIFVTQVLYLKENAEKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP+LY A+ +I +V G+ D+VGP+CETGDF+ +R + Sbjct: 300 FALVDGAMNDLIRPSLYSAWQKIIPVVPRPGETRQ--YDVVGPVCETGDFLGKDRALN-I 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 R DLL + +GAYG + YNSR E+MV+G + +++R R +L + + + Sbjct: 357 RANDLLAVRSSGAYGFTMASNYNSRPRAAEVMVDGERHYLVREREKVAQLWQGEQL 412 >gi|329847898|ref|ZP_08262926.1| diaminopimelate decarboxylase [Asticcacaulis biprosthecum C19] gi|328842961|gb|EGF92530.1| diaminopimelate decarboxylase [Asticcacaulis biprosthecum C19] Length = 458 Score = 302 bits (772), Expect = 1e-79, Method: Composition-based stats. Identities = 182/432 (42%), Positives = 258/432 (59%), Gaps = 12/432 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM------ 54 M+ F Y +G LH E VSL +A V TP Y YS+ +E++Y F+ A + + Sbjct: 1 MNHFDYLDGELHCEGVSLTDIARDVGTPVYVYSSATLERHYNVFAGALNASPALRSPKGE 60 Query: 55 ---VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 V YA+KANSN AV++TLA G G D VSEGE+R+A+ A VPAE+IVFSGVGKT E+ Sbjct: 61 APLVAYAMKANSNLAVLRTLALQGCGADTVSEGEIRKAMTAGVPAEKIVFSGVGKTDAEM 120 Query: 112 DLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF 171 AL++GIY NVES EL L + A SL AP R+NP + + H KI+TG DKF Sbjct: 121 AFALKAGIYQLNVESRPELDRLARVAASLNMIAPFVIRINPGVGSGGHAKITTGGARDKF 180 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 GI + LYA A+ + G+ HIGSQI + AF ++ + LR+ G ++ Sbjct: 181 GISAEEALKLYADAAAHRNLAPVGIACHIGSQITDLTPLQAAFSRMKGWVEALRAEGLSV 240 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 + +D+GGGLG+ Y + PP D+A + G+L + EPGR + A+ G+LV++V+ Sbjct: 241 ERLDLGGGLGVPYFNQPAPPHPVDFAEMAALTVGHLGLRYTFEPGRVIAANAGVLVSRVV 300 Query: 292 SIK--KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + + F++LD AMND +RP LYDAYH+I + P D I D+VGP+CETGD Sbjct: 301 HVHERIDSGQKFLVLDAAMNDLIRPALYDAYHDIRPVAAPTNDDSDI-YDVVGPVCETGD 359 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 NR++ R G+L+ GAYGAV YNSR L PE++V F ++RPR ++ E Sbjct: 360 TFTRNRELPRLRAGELVAFMSAGAYGAVMGSEYNSRPLAPEVLVRDGGFAVVRPRPSYDE 419 Query: 410 LIELDSIPAWLQ 421 ++ + +P WL+ Sbjct: 420 MMAREPLPQWLE 431 >gi|74316244|ref|YP_313984.1| diaminopimelate decarboxylase [Thiobacillus denitrificans ATCC 25259] gi|74055739|gb|AAZ96179.1| diaminopimelate decarboxylase [Thiobacillus denitrificans ATCC 25259] Length = 414 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 183/416 (43%), Positives = 261/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+A +G LH E V+L+ LA TP Y YS A+E Y + AF ++CYA+K Sbjct: 1 MNAPHRIDGRLHLEGVALDTLAERCGTPLYVYSRAALEAAYRAYEEAFAATPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANS+ A++ A +G+G DIVS GEL R L+A ++VFSGVGK +DE+ AL++GI Sbjct: 61 ANSSLALLNLFARMGAGFDIVSGGELARVLSAQGDPRKVVFSGVGKRVDEMRAALEAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SEL LN+ A LGK AP++FRVNPD++ TH ISTG KE+KFG+PI + + Sbjct: 121 CFNVESTSELHRLNRVAGELGKVAPVSFRVNPDVDPKTHPYISTGLKENKFGVPIAEAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY A+ LP ++++G+D HIGSQ+ + A + L L + G ++HID+GGG+ Sbjct: 181 LYRTAAALPHIRVTGIDCHIGSQLLDLSPLADAADRVFALVDALAAEGIALEHIDLGGGV 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI+Y + P + Y ++ + F + +I+EPGR LV + G+L+ +V +K ADK Sbjct: 241 GISYRGE-TAPDLAGYGRVLAERFAGRRETLIVEPGRSLVGNAGLLLARVEYLKLGADKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND MRP LY+AYHEI ++ A D+VGPICETGDF+ R+++ Sbjct: 300 FAIVDAAMNDLMRPALYEAYHEIVEVI--ARPLPKRRYDVVGPICETGDFLGSARELS-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + +GAYG S YNSR EI+V+ + H+IR R T + L+ + + Sbjct: 357 DEGDLVALLSSGAYGMSMSSNYNSRPRAAEILVDKKEIHLIRERETQEGLMAGERL 412 >gi|187930324|ref|YP_001900811.1| diaminopimelate decarboxylase [Ralstonia pickettii 12J] gi|187727214|gb|ACD28379.1| diaminopimelate decarboxylase [Ralstonia pickettii 12J] Length = 423 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 176/419 (42%), Positives = 257/419 (61%), Gaps = 6/419 (1%) Query: 1 MS-AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS + EG+L E V+L+ +A TP Y YS A+ NY ++ A +G + V YA+ Sbjct: 5 MSESLIRQEGALMIEGVALDAIAAQFGTPTYVYSRAALTANYRAYAAACEGRNAHVQYAM 64 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AV++ A LG+G DIVS GEL+R L A PA ++VFSGVGK+ DE+ AL+ G+ Sbjct: 65 KANSNLAVLQVFAQLGAGFDIVSAGELKRVLRAGAPASKVVFSGVGKSADEMRFALEVGV 124 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVES EL LN A S+GK AP++ R+NPD++A TH ISTG K +KFG+ ++ Sbjct: 125 ACFNVESIPELHRLNDVAASMGKVAPVSLRINPDVDAKTHPYISTGLKGNKFGVAFDEVL 184 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y A+ +P + + G+D HIGSQI ++ + A + D+ QL + G ++ HIDVGGG Sbjct: 185 PTYRAAAAMPNLHVVGIDCHIGSQITEVSPYLDALDKVLDVVTQLDAEGIHLSHIDVGGG 244 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSA 297 LGI Y + P ++ +L+ + ++ EPGR LV + G+L+T+V +K A Sbjct: 245 LGITYTDETPPDITAFARTLLDRVEQRGFGDRTVLFEPGRSLVGNAGLLLTRVEYLKPGA 304 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 K F I+D AMND RP +Y+AYH I + + D+VGP+CE+GD++ +R + Sbjct: 305 SKNFCIVDAAMNDLARPAMYEAYHHIVPVRE--SQSAPVVYDVVGPVCESGDWLGRDRSL 362 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 A +PGD+L I GAYG S YN+R E++V+G + H+ R R F++LI + + Sbjct: 363 A-VQPGDVLAILSAGAYGFTMSSNYNTRNRAAEVIVDGDKIHLARERECFEDLIRGEHL 420 >gi|257092050|ref|YP_003165691.1| diaminopimelate decarboxylase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044574|gb|ACV33762.1| diaminopimelate decarboxylase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 414 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 197/418 (47%), Positives = 258/418 (61%), Gaps = 5/418 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+AF G LHAE+VSL LA TP + YS A+E + F G+D +VCYA+K Sbjct: 1 MTAFARRNGVLHAESVSLIDLAARFGTPCWVYSRAALEASLAEFERELAGLDALVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV+ A G+G DIVS GELRRALAA RIVFSGVGKT E++LAL + I Sbjct: 61 ANSNLAVLDVFARRGAGFDIVSGGELRRALAAGADPRRIVFSGVGKTAAEMELALAADIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL L+ A LGK API+ RVNPD++A TH ISTG KE+KFG+ + + Sbjct: 121 CFNVESAPELDRLSAVAGRLGKTAPISLRVNPDVDAKTHPYISTGLKENKFGVAYEEALA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY +A++LP + ISG+D HIGSQ+ F A + L QL +NG + HID+GGGL Sbjct: 181 LYRHAASLPNLTISGIDCHIGSQLLDPAPFAAALDKILTLVDQLAANGIVLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + P+ Y + Q + +++LEPGR LV + G+L+T+V +K K Sbjct: 241 GIRYRDE-DAPTVQAYLQPMLQKLRDRHLQVLLEPGRRLVGNAGLLLTRVEYLKPGEVKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP LY ++H+I +V P G +IVGP+CE+GDF+ R +A Sbjct: 300 FAIVDAAMNDLARPALYGSWHDIVPVVAPQG--ATRPWEIVGPVCESGDFLGHGRDLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 GDLL I GAYG S YNSR E+MV+G+ H++R R T +EL L+ +P Sbjct: 357 ATGDLLAIMSAGAYGMAMSSNYNSRPRAAEVMVDGADVHLVRRRETAEELYALEQRLP 414 >gi|163781655|ref|ZP_02176655.1| diaminopimelate decarboxylase [Hydrogenivirga sp. 128-5-R1-1] gi|159882875|gb|EDP76379.1| diaminopimelate decarboxylase [Hydrogenivirga sp. 128-5-R1-1] Length = 422 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 163/410 (39%), Positives = 235/410 (57%), Gaps = 4/410 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 G LH E +SL++LA TP Y YS + I + + AF G +VCYA+KAN Sbjct: 15 YIGVKNGKLHLEGLSLKELAQEFGTPLYVYSASYIRERIRAYQKAFPG--ALVCYAVKAN 72 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 N V++ G+G DIVS GEL AL + RIV++GVGKT+ E++LA++ I F Sbjct: 73 FNPEVVRVAGEEGAGADIVSGGELVAALKGGIDPSRIVYAGVGKTVPELELAIEKEILMF 132 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL L++ A LGK+A IA RVNPD++ TH ISTG K+ KFG+ Y Sbjct: 133 NVESRDELYVLDEIAGRLGKRARIAIRVNPDVDPKTHPYISTGMKKSKFGVDFETAREEY 192 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A L +++ G+ HIGSQ+ + + +A + + +L + L G I ++D+GGGLGI Sbjct: 193 RLARELKNLEVVGIHCHIGSQLLDVSPYREAVQKVVELYRDLTDEGFEINYLDIGGGLGI 252 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + R PS + A + + +IILEPGR + + G+L+ +V +K K F+ Sbjct: 253 KYKPEDREPSPEELAREVLPLLEGVSAQIILEPGRSITGNAGLLIAQVQFLKDKEIKHFI 312 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D MND +RP +YDAYH + + + R HI ADIVGPICETGDF+A +R+I Sbjct: 313 IVDAGMNDLVRPAIYDAYHHVVPVE--SKGREHIIADIVGPICETGDFLAKDRRIEFLER 370 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 GD + + GAYG + YN R E++V + +IR R + ++ Sbjct: 371 GDYIAVLSAGAYGFAMASHYNVRPRPAEVLVENGSYRLIREREDYNYILN 420 >gi|302343308|ref|YP_003807837.1| diaminopimelate decarboxylase [Desulfarculus baarsii DSM 2075] gi|301639921|gb|ADK85243.1| diaminopimelate decarboxylase [Desulfarculus baarsii DSM 2075] Length = 420 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 190/420 (45%), Positives = 272/420 (64%), Gaps = 1/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y +G LHAE VSL ++A V TP Y Y+ +A+ + F AF G+D ++CYA+K Sbjct: 1 MDLFEYRDGVLHAEGVSLTEIAQAVGTPTYVYAQSAMRAEFAAFQEAFAGLDHLICYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN+AV+ + A +G G DIVS GEL RALAA VPAERIV+SGVGK E++ AL++GI Sbjct: 61 ANSNKAVLGSFAAMGGGADIVSGGELARALAAGVPAERIVYSGVGKLDWELEAALKAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL L+Q A LG KAP++ RVNPD++A TH KI+TG ++KFG+ + + Sbjct: 121 MFNVESAQELTVLDQIAGRLGLKAPVSLRVNPDVDAKTHPKITTGLAKNKFGLDMGLAFA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y +A+ LP + + GV HIGSQ+ ++ F A + L DL Q+LR G ++ ID+GGG+ Sbjct: 181 QYLHAARLPNLVVKGVSCHIGSQLTEVAPFVDALERLADLVQRLRREGLRLEIIDLGGGI 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ PP+ +YA+ + L K++LEPGR LV + G+L+T+V K + K Sbjct: 241 GIRYN-QETPPTPREYAARLRPVLEGLGLKLVLEPGRRLVGEAGVLLTRVHYAKTTPAKH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV++D AMND +RP YD++H + + AG+ + AD+VG ICETGDF+ R + + Sbjct: 300 FVVVDAAMNDLIRPAFYDSFHAVRPVAQNAGNGQRLVADVVGGICETGDFLVRERDLPVL 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 R GDLL I GAYG S YNSR E++V G ++ ++R R + ++L + + W+ Sbjct: 360 RRGDLLAIMSAGAYGFAMSSQYNSRPRAAEVLVCGQEWAVVRRRESIEDLSRGEELAPWM 419 >gi|262369521|ref|ZP_06062849.1| diaminopimelate decarboxylase [Acinetobacter johnsonii SH046] gi|262315589|gb|EEY96628.1| diaminopimelate decarboxylase [Acinetobacter johnsonii SH046] Length = 416 Score = 301 bits (770), Expect = 2e-79, Method: Composition-based stats. Identities = 187/416 (44%), Positives = 258/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE SL++LA TP Y YS EK++ AFD +D +C+A+K Sbjct: 1 MS-FTRNHGVLHAEQCSLQQLAQQFGTPLYVYSKATFEKHFTEMDRAFDFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LG+G DIV+ GEL R L A A +IVFSG+GKT ++ AL+ GI Sbjct: 60 SNSNIAVLNVLAKLGAGFDIVTGGELARVLKAGGDASKIVFSGLGKTEIDVQKALEVGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL + + A LGKKAPI+ RVNPD++A TH ISTG KE+KFGIP + Sbjct: 120 CFNVESHAELDRIQKVAAKLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFE 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA+TLP + I G+D HIGSQ+ + + F A + + QL++ G ++HID+GGGL Sbjct: 180 TYQYAATLPNLDIIGIDCHIGSQLTETQPFVDALDRVIVMIDQLKTMGIQLKHIDIGGGL 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP+ +YA+ + L K+ +EPGR + A+ G+L+TKV +K + + Sbjct: 240 GVTYKDE-VPPTVFEYANAMKPALEKLGLKVYMEPGRSISANAGVLLTKVDLLKPTIHRN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+ + V P D D+VG ICETGDF+ R +A Sbjct: 299 FAIIDAAMNDLIRPALYEAWMD-IQPVTPRSDVEAKEWDVVGAICETGDFLGKERLLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + D+L + GAYG V S YNSR E+MV+G H+IR R T + L + + + Sbjct: 357 KENDVLAVLGAGAYGFVMSSNYNSRGRAAEVMVDGENAHLIRERETIESLWDKERL 412 >gi|33151309|ref|NP_872662.1| diaminopimelate decarboxylase [Haemophilus ducreyi 35000HP] gi|33147529|gb|AAP95051.1| diaminopimelate decarboxylase [Haemophilus ducreyi 35000HP] Length = 417 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 189/415 (45%), Positives = 259/415 (62%), Gaps = 2/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE V+++ LA TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MNHFAYKHHQLFAEKVAVKALATQYGTPAYIYSRATLEQHWRAFDEAFGDRPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N N AV+ +A LGSG DIVS+GEL R LAA +IVFSGV K+ EI AL GI+ Sbjct: 61 SNPNLAVLNVMAKLGSGFDIVSQGELERVLAAGGDPAKIVFSGVAKSHIEIRRALAVGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL +NQ A LGK A I+ RVNPD++A TH ISTG KE+KFGI + Q + Sbjct: 121 CFNVESVAELHRINQIAGELGKIATISLRVNPDVDAGTHPYISTGLKENKFGISVQQARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ G+D HIGSQ+ +++ F A L L +QL +G + H+D+GGGL Sbjct: 181 VYQLASRLPHIQVVGLDCHIGSQLTELQPFLDAADRLIVLLEQLYRDGIRLSHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ YH++ P + +L+ ++ + +IILEPGR + AD GILVTKV +K + D+ Sbjct: 241 GVVYHTETPPQPAEYVRALLAKFAHYPELEIILEPGRAITADAGILVTKVEYLKSNEDRH 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LYDAY V+ + R+ ++VGPICET DF+ R +A Sbjct: 301 FAIVDTGMNDLLRPALYDAYMH-ISEVDQSLKRVEQQYEVVGPICETADFLGKARTLA-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GDLL + GAYGA S TYNSR EIMV+G+ H+I+ R F EL + Sbjct: 359 AEGDLLAVYSAGAYGASMSSTYNSRPQAVEIMVDGATSHLIKKRSDFAELWRNEK 413 >gi|309782874|ref|ZP_07677594.1| diaminopimelate decarboxylase [Ralstonia sp. 5_7_47FAA] gi|308918298|gb|EFP63975.1| diaminopimelate decarboxylase [Ralstonia sp. 5_7_47FAA] Length = 419 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 177/419 (42%), Positives = 258/419 (61%), Gaps = 6/419 (1%) Query: 1 MS-AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS + EG+L E V+L+ +A TP Y YS A+ NY ++ A +G + V YA+ Sbjct: 1 MSESLIRQEGALMIEGVALDAIAAQFGTPTYVYSRAALTANYRAYAAACEGRNAHVQYAM 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AV++ A LG+G DIVS GEL+R LAA PA ++VFSGVGK+ DE+ AL+ G+ Sbjct: 61 KANSNLAVLQVFAQLGAGFDIVSAGELKRVLAAGAPAAKVVFSGVGKSADEMRFALKVGV 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVES EL LN A S+GK AP++ R+NPD++A TH ISTG K +KFG+ ++ Sbjct: 121 ACFNVESIPELHRLNDVAASMGKVAPVSLRINPDVDAKTHPYISTGLKGNKFGVAFDEVL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y A+ +P +++ G+D HIGSQI ++ + A + D+ QL + G + HIDVGGG Sbjct: 181 PTYRAAAAMPNLRVVGIDCHIGSQITEVSPYLDALDKVLDVVTQLDAEGIRLAHIDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSA 297 LGI Y + P ++ +L+ + ++ EPGR LV + G+L+T+V +K A Sbjct: 241 LGITYTDETPPDITAFARTLLDRVEQRGFGDRTVLFEPGRSLVGNAGLLLTRVEYLKPGA 300 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 K F I+D AMND RP +Y+AYH I + + D+VGP+CE+GD++ +R + Sbjct: 301 SKNFCIVDAAMNDLARPAMYEAYHHIVPVRE--SQSAPVVYDVVGPVCESGDWLGRDRSL 358 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 A +PGD+L I GAYG S YN+R E++V+G + H+ R R F++LI + + Sbjct: 359 A-VQPGDVLAILSAGAYGFTMSSNYNTRNRAAEVIVDGDKVHLARERECFEDLIRGEHL 416 >gi|239500988|ref|ZP_04660298.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB900] Length = 416 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 194/416 (46%), Positives = 266/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE SLE+LA TP Y YS A EK+YL AFD +D +C+A+K Sbjct: 1 MS-FTRINGVLHAEQCSLEQLAQQFGTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LG+G DIVS GEL R L A A +IVFSG+GKT +I+ +L GI Sbjct: 60 SNSNIAVLNVLAKLGAGFDIVSGGELARVLKAGGDASKIVFSGLGKTEADIETSLNVGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL + + A LGKKAPI+ RVNPD++A TH ISTG KE+KFGIP ++ Sbjct: 120 CFNVESYAELDRIQKVAARLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYE 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++LP ++I G+D HIGSQ+ + + F A + + +L+ G N++HID+GGGL Sbjct: 180 TYQYAASLPNLEIVGIDCHIGSQLTETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGL 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PPS +YA+ + L K+ +EPGR + A+ G+L+TKV +K + + Sbjct: 240 GVCYKDE-IPPSVEEYANSMKPALEKLGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+ +I +V P D D+VG ICETGDFI +R +A Sbjct: 299 FAIIDAAMNDLIRPALYEAWMDIQPVV-PRTDTEEKTWDLVGAICETGDFIGKDRSLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + DLL + GAYG V S YN+R E+MV+G + ++IR R T + L E + + Sbjct: 357 QENDLLTVLGAGAYGFVMSSNYNTRGRAAEVMVSGEKSYLIRERETVESLWEKERL 412 >gi|169632675|ref|YP_001706411.1| diaminopimelate decarboxylase [Acinetobacter baumannii SDF] gi|169795020|ref|YP_001712813.1| diaminopimelate decarboxylase [Acinetobacter baumannii AYE] gi|184159195|ref|YP_001847534.1| diaminopimelate decarboxylase [Acinetobacter baumannii ACICU] gi|213158317|ref|YP_002320368.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB0057] gi|215482568|ref|YP_002324760.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB307-0294] gi|301345397|ref|ZP_07226138.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB056] gi|301511589|ref|ZP_07236826.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB058] gi|301594791|ref|ZP_07239799.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB059] gi|332854282|ref|ZP_08435282.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6013150] gi|332865658|ref|ZP_08436484.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6013113] gi|332876024|ref|ZP_08443810.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6014059] gi|169147947|emb|CAM85810.1| diaminopimelate decarboxylase [Acinetobacter baumannii AYE] gi|169151467|emb|CAP00216.1| diaminopimelate decarboxylase [Acinetobacter baumannii] gi|183210789|gb|ACC58187.1| Diaminopimelate decarboxylase [Acinetobacter baumannii ACICU] gi|193078108|gb|ABO13049.2| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 17978] gi|213057477|gb|ACJ42379.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB0057] gi|213986285|gb|ACJ56584.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB307-0294] gi|322509109|gb|ADX04563.1| lysA [Acinetobacter baumannii 1656-2] gi|332728098|gb|EGJ59487.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6013150] gi|332735179|gb|EGJ66259.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6013113] gi|332735890|gb|EGJ66931.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6014059] Length = 416 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 194/416 (46%), Positives = 266/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE SLE+LA TP Y YS A EK+YL AFD +D +C+A+K Sbjct: 1 MS-FTRINGVLHAEQCSLEQLAQQFGTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LG+G DIVS GEL R L A A +IVFSG+GKT +I+ +L GI Sbjct: 60 SNSNIAVLNVLAKLGAGFDIVSGGELARVLKAGGDASKIVFSGLGKTEADIETSLNVGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL + + A LGKKAPI+ RVNPD++A TH ISTG KE+KFGIP ++ Sbjct: 120 CFNVESYAELDRIQKVAARLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYE 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++LP ++I G+D HIGSQ+ + + F A + + +L+ G N++HID+GGGL Sbjct: 180 TYQYAASLPNLEIVGIDCHIGSQLTETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGL 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PPS +YA+ + L K+ +EPGR + A+ G+L+TKV +K + + Sbjct: 240 GVCYKDE-TPPSVEEYANSMKPALEKLGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+ +I +V P D D+VG ICETGDFI +R +A Sbjct: 299 FAIIDAAMNDLIRPALYEAWMDIQPVV-PRTDTEEKTWDLVGAICETGDFIGKDRSLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + DLL + GAYG V S YN+R E+MV+G + ++IR R T + L E + + Sbjct: 357 QENDLLTVLGAGAYGFVMSSNYNTRGRAAEVMVSGEKSYLIRERETVESLWEKERL 412 >gi|225850923|ref|YP_002731157.1| diaminopimelate decarboxylase [Persephonella marina EX-H1] gi|225645958|gb|ACO04144.1| diaminopimelate decarboxylase [Persephonella marina EX-H1] Length = 426 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 164/412 (39%), Positives = 245/412 (59%), Gaps = 3/412 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y E L EN+ ++++A V TPFY YS AI + AF+ +T++CYA KAN Sbjct: 8 YFYYRENQLFCENIPIKEIASKVGTPFYLYSKQAILDRIDQYKKAFEEYNTLICYAAKAN 67 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN +++K GLDIVS GEL +A A P+ +IV++GVGKT E++ A++ I F Sbjct: 68 SNLSILKIFEENDLGLDIVSGGELYKAKKAGFPSNKIVYAGVGKTDFELEYAIRENILSF 127 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE E+ L++ A L K I+ RVNPD++ TH ISTG ++ KFGI I + ++Y Sbjct: 128 NVESEMEIDVLDELAEKLNKTVRISIRVNPDVDPKTHPYISTGLRKSKFGIDIDEALNVY 187 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A + + G+ HIGSQI +I + +A + +L +L+ G +QH D+GGG+GI Sbjct: 188 RKAVKKKNIDVIGIHCHIGSQIMEISPYVEAVEKTAELVFRLKKEGIELQHFDIGGGIGI 247 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + PP+ D A + ++I+EPGR L+ + G L+T+V+ +K DK F+ Sbjct: 248 RYRPEDNPPTPEDLAKAVIPIVRTTGLRLIIEPGRSLIGEAGALITQVVFLKNKGDKHFI 307 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D MND +RP +Y+AYH I + + ADIVGPICETGDF AL+R+I + Sbjct: 308 IVDSGMNDLLRPAMYNAYHHILSVEK---KERKVVADIVGPICETGDFFALDREIDDVQR 364 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 D L + GAYG+ S YN R E++V+ + F++I+ R + + +L+ Sbjct: 365 KDYLAVMSAGAYGSSMSSNYNVRPRAAEVLVSDNSFYLIKEREDYSYITKLE 416 >gi|289207307|ref|YP_003459373.1| diaminopimelate decarboxylase [Thioalkalivibrio sp. K90mix] gi|288942938|gb|ADC70637.1| diaminopimelate decarboxylase [Thioalkalivibrio sp. K90mix] Length = 434 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 255/416 (61%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +LHAE V+L+ LA +V TP Y YS +E++Y FS A G VC+A+K Sbjct: 1 MDYFDYHGNTLHAEGVALDHLAQLVGTPAYVYSRATLERHYRAFSEALIGTPHQVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANS V+ LA LG+G DIVS GEL R L A ++VFSGVGKT E+ AL+ GI+ Sbjct: 61 ANSALGVLNVLARLGAGFDIVSGGELERVLRAGGDPAKVVFSGVGKTAAEMRRALKVGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L A +G AP++ RVNPD++A TH I+TG +E+KFG+ I + + Sbjct: 121 CFNVESAPELERLESIAAEMGVTAPVSIRVNPDVDAETHPYIATGLRENKFGVAIEEAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA ++ +GVD HIGSQ+ +I+ F A K + L QL ++G ++HIDVGGGL Sbjct: 181 LYARVRDSQHLEATGVDFHIGSQLTRIDPFTDALKRVLTLVDQLAADGIELEHIDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP +AS + + G K++LEPGR + A+ G+ +T+V +K + Sbjct: 241 GVRYRDE-TPPEPDAWASALRKVMGERSLKVLLEPGRAIAANAGVFLTRVEYLKHTEAHD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ EI +V + DIVGP+CETGDF+ R++A Sbjct: 300 FAIVDGAMNDLLRPALYGAWQEIIPVVQRR-ETAARTYDIVGPVCETGDFLGRERELA-L 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD+L + GAYG V +G YNSR PEIMV+G F II R L+ +S+ Sbjct: 358 AAGDVLAVRSAGAYGYVMAGNYNSRPRPPEIMVDGDHFQIINRREQVDHLMMRESM 413 >gi|83591736|ref|YP_425488.1| diaminopimelate decarboxylase [Rhodospirillum rubrum ATCC 11170] gi|83574650|gb|ABC21201.1| diaminopimelate decarboxylase [Rhodospirillum rubrum ATCC 11170] Length = 425 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 197/425 (46%), Positives = 282/425 (66%), Gaps = 1/425 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G LHAE+V+L +A V TPFY YS +E+++ FS+AF G +C+A K Sbjct: 1 MDYFSYRNGQLHAEDVALAAIAEAVGTPFYVYSAATLERHFRVFSDAFAGQPITLCFATK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 N N+AV+ LA LG+G D+VS+GE+ ALAA VPA RIVFSGV KT E+ AL++GI+ Sbjct: 61 TNGNKAVLALLAGLGAGADVVSQGEMEHALAAGVPAGRIVFSGVAKTKAEMAAALEAGIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 NVESE EL+ L++ A +LGK AP+A R+NPD+ A TH KI+TG+KE+KFGI + Sbjct: 121 QINVESEPELEALSEVAQALGKTAPVALRINPDVAAATHDKIATGRKENKFGIDWTVAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A+ LPG+ + GV +HIGSQI ++ F +AF+ LR+L LR++G ++ +D+GGGL Sbjct: 181 IFAKAAGLPGIAVKGVAVHIGSQILDLDPFRRAFERLRELVLALRADGIALERVDLGGGL 240 Query: 241 GIAYH-SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 GI YH D P ++YA+L + FG+L ++ EPGR + + G+LV++V+ K+ + Sbjct: 241 GIPYHRDDPASPPPAEYAALARRIFGDLGVHLVAEPGRLIAGNAGMLVSRVVYRKQGETR 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 TF+ILD ND +RP +YDA+H+I + A + + D+VGPICE+GD A R + Sbjct: 301 TFLILDAGFNDLIRPAMYDAFHDILPVTAAAENAVLTPVDVVGPICESGDIFARQRPLPP 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL+ GAYGA S TYN R L+PE+MV+G +F ++R R + E+ L+S+P W Sbjct: 361 IAAGDLVAFATAGAYGASMSSTYNGRPLVPEVMVSGDRFAVVRRRPSVAEMTALESVPPW 420 Query: 420 LQKTP 424 L K Sbjct: 421 LAKQA 425 >gi|260549303|ref|ZP_05823523.1| diaminopimelate decarboxylase [Acinetobacter sp. RUH2624] gi|260407709|gb|EEX01182.1| diaminopimelate decarboxylase [Acinetobacter sp. RUH2624] Length = 416 Score = 300 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 195/416 (46%), Positives = 266/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE SLE+LA TP Y YS TA EK+YL AFD +D +C+A+K Sbjct: 1 MS-FTRINGVLHAEQCSLEQLAQQFGTPLYVYSKTAFEKHYLDMDRAFDFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LG+G DIVS GEL R L A A +IVFSG+GKT +I+ +L GI Sbjct: 60 SNSNLAVLSVLAKLGAGFDIVSGGELARVLKAGGDASKIVFSGLGKTEVDIETSLNVGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL + + A LGKKAPI+ RVNPD++A TH ISTG KE+KFGIP ++ Sbjct: 120 CFNVESYAELDRIQKVAARLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYE 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++LP ++I G+D HIGSQ+ + + F A + + +L+ G N++HID+GGGL Sbjct: 180 TYQYAASLPNLEIVGIDCHIGSQLTETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGL 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PPS +YA+ + L K+ +EPGR + A+ G+L+TKV +K + + Sbjct: 240 GVCYKDE-TPPSVEEYANSMKPALEKLGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+ +I +V P D D+VG ICETGDFI +R +A Sbjct: 299 FAIIDAAMNDLIRPALYEAWMDIQPVV-PRTDTEEKVWDLVGAICETGDFIGKDRSLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + DLL + GAYG V S YN+R E+MV+G ++IR R T + L E + + Sbjct: 357 QENDLLAVLGAGAYGFVMSSNYNTRGRAAEVMVSGENSYLIRERETVESLWEKERL 412 >gi|241664492|ref|YP_002982852.1| diaminopimelate decarboxylase [Ralstonia pickettii 12D] gi|240866519|gb|ACS64180.1| diaminopimelate decarboxylase [Ralstonia pickettii 12D] Length = 423 Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats. Identities = 176/419 (42%), Positives = 258/419 (61%), Gaps = 6/419 (1%) Query: 1 MS-AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS + EG+L E V+L+ +A TP Y YS A+ NY ++ A +G + V YA+ Sbjct: 5 MSESLIRQEGALMIEGVALDAIAAQFGTPTYVYSRAALTANYRAYAAACEGRNAHVQYAM 64 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AV++ A LG+G DIVS GEL+R LAA PA ++VFSGVGK+ DE+ AL+ G+ Sbjct: 65 KANSNLAVLQVFAQLGAGFDIVSAGELKRVLAAGAPAAKVVFSGVGKSADEMRFALKVGV 124 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVES EL LN A S+GK AP++ R+NPD++A TH ISTG K +KFG+ ++ Sbjct: 125 ACFNVESIPELHRLNDVAASMGKVAPVSLRINPDVDAKTHPYISTGLKGNKFGVAFDEVL 184 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y A+ +P +++ G+D HIGSQI ++ + A + D+ QL + G + HIDVGGG Sbjct: 185 PTYRAAAAMPNLRVVGIDCHIGSQITEVSPYLDALDKVLDVVTQLDAEGIRLAHIDVGGG 244 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSA 297 LGI Y + P ++ +L+ + ++ EPGR LV + G+L+T+V +K A Sbjct: 245 LGITYTDETPPDITAFARTLLDRVEQRGFGDRTVLFEPGRSLVGNAGLLLTRVEYLKPGA 304 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 K F I+D AMND RP +Y+AYH I + + D+VGP+CE+GD++ +R + Sbjct: 305 SKNFCIVDAAMNDLARPAMYEAYHHIVPVRE--SQSAPVVYDVVGPVCESGDWLGRDRSL 362 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 A +PGD++ I GAYG S YN+R E++V+G + H+ R R F++LI + + Sbjct: 363 A-VQPGDVVAILSAGAYGFTMSSNYNTRNRAAEVIVDGDKVHLARERECFEDLIRGEHL 420 >gi|17547698|ref|NP_521100.1| diaminopimelate decarboxylase [Ralstonia solanacearum GMI1000] gi|17430003|emb|CAD16688.1| probable diaminopimelate decarboxylase protein [Ralstonia solanacearum GMI1000] Length = 451 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 182/419 (43%), Positives = 258/419 (61%), Gaps = 6/419 (1%) Query: 1 MS-AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS + +G+L E V+LE +A TP Y YS A+ NY ++ A +G + V YA+ Sbjct: 33 MSESLIRQDGALMIEGVALEAIAARFGTPTYVYSRAALTANYRAYAAACEGRNARVQYAM 92 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AV++ A LG+G DIVS GELRR LAA A +VFSGVGKT DE+ LAL++G+ Sbjct: 93 KANSNLAVLQIFAQLGAGFDIVSGGELRRVLAAGGKAADVVFSGVGKTADEMRLALEAGV 152 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVES EL LN+ A SLGK AP++ RVNPD++A TH ISTG K +KFG+ ++ Sbjct: 153 ACFNVESIPELHRLNEVAGSLGKTAPVSLRVNPDVDAKTHPYISTGLKGNKFGVAFDEVL 212 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y A+ +P +++ G+D HIGSQI ++ + A + D+ +L + G + HIDVGGG Sbjct: 213 PTYRAAAAMPNLRVVGIDCHIGSQITEVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGG 272 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSA 297 LGI Y + P ++ +L+ + ++ EPGR LV + G+L+T+V +K A Sbjct: 273 LGITYTDETPPDITAFARTLLDRIEQRGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGA 332 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 K F I+D AMND RP +Y+AYH I + G DIVGP+CE+GD++ +R + Sbjct: 333 AKNFCIVDAAMNDLARPAMYEAYHHIVPVRERGG--APTVYDIVGPVCESGDWLGRDRAL 390 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +PGDLL I GAYG S YN+R E++V+G + H+ R R F++LI + + Sbjct: 391 -DAQPGDLLAILSAGAYGFTMSSNYNTRGRAAEVIVDGDRVHVARERERFEDLIRGEQL 448 >gi|299065455|emb|CBJ36624.1| Diaminopimelate decarboxylase [Ralstonia solanacearum CMR15] Length = 419 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 183/419 (43%), Positives = 258/419 (61%), Gaps = 6/419 (1%) Query: 1 MS-AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS + +G+L E V+LE +A TP Y YS A+ NY ++ A +G + V YA+ Sbjct: 1 MSESLIRQDGALMIEGVALEAIAARFGTPTYVYSRAALTANYRAYAAACEGRNARVQYAM 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AV++ A LG+G DIVS GELRR LAA A +VFSGVGKT DE+ LAL++G+ Sbjct: 61 KANSNLAVLQIFAQLGAGFDIVSGGELRRVLAAGGKAADVVFSGVGKTADEMRLALEAGV 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVES EL LN+ A SLGK AP++ RVNPD++A TH ISTG K +KFGI ++ Sbjct: 121 ACFNVESIPELHRLNEVAGSLGKTAPVSLRVNPDVDAKTHPYISTGLKGNKFGIAFEEVL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y A+ +P +++ G+D HIGSQI ++ + A + D+ +L + G + HIDVGGG Sbjct: 181 PTYRAAAAMPNLRVVGIDCHIGSQITEVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSA 297 LGI Y + P ++ +L+ + ++ EPGR LV + G+L+T+V +K A Sbjct: 241 LGITYTDETPPDITAFARTLLDRIEQRGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGA 300 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 K F I+D AMND RP +Y+AYH I + G DIVGP+CE+GD++ +R + Sbjct: 301 AKNFCIVDAAMNDLARPAMYEAYHHIVPVRERGG--APTVYDIVGPVCESGDWLGRDRAL 358 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +PGDLL I GAYG S YN+R E++V+G + H+ R R F++LI + + Sbjct: 359 -DAQPGDLLAILSAGAYGFTMSSNYNTRGRAAEVIVDGDRVHVARERERFEDLIRGEQL 416 >gi|260556500|ref|ZP_05828718.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 19606] gi|260409759|gb|EEX03059.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 19606] Length = 416 Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 194/416 (46%), Positives = 267/416 (64%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE SLE+LA TP Y YS A EK+YL AFD +D +C+A+K Sbjct: 1 MS-FTRINGVLHAEQCSLEQLAQQFGTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LG+G DIVS GEL R L A A +IVFSG+GKT +I+ +L GI Sbjct: 60 SNSNIAVLNVLAKLGAGFDIVSGGELARVLKAGGDASKIVFSGLGKTEADIETSLNVGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL + + A LGKKAPI+ RVNPD++A TH ISTG KE+KFGIP ++ Sbjct: 120 CFNVESYAELDRIQKVAARLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYE 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++LP ++I G+D HIGSQ+ + + F A + + +L+ G N++HID+GGGL Sbjct: 180 TYQYAASLPNLEIVGIDCHIGSQLTETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGL 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PPS +YA+ + L K+ +EPGR + A+ G+L+TKV +K + + Sbjct: 240 GVCYKDE-TPPSVEEYANSMKPALEKLGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+ +I +V P D + D+VG ICETGDFI +R +A Sbjct: 299 FAIIDAAMNDLIRPALYEAWMDIQPVV-PRTDTVEKTWDLVGAICETGDFIGKDRSLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + DLL + GAYG V S YN+R E+MV+G + ++IR R T + L E + + Sbjct: 357 QENDLLTVLGAGAYGFVMSSNYNTRGRAAEVMVSGEKSYLIRERETVESLWEKERL 412 >gi|255320350|ref|ZP_05361534.1| diaminopimelate decarboxylase [Acinetobacter radioresistens SK82] gi|262379367|ref|ZP_06072523.1| diaminopimelate decarboxylase [Acinetobacter radioresistens SH164] gi|255302545|gb|EET81778.1| diaminopimelate decarboxylase [Acinetobacter radioresistens SK82] gi|262298824|gb|EEY86737.1| diaminopimelate decarboxylase [Acinetobacter radioresistens SH164] Length = 416 Score = 299 bits (765), Expect = 6e-79, Method: Composition-based stats. Identities = 187/416 (44%), Positives = 258/416 (62%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE SL++LA TP Y YS A EK+Y AF+ +D +C+A+K Sbjct: 1 MS-FTRINGVLHAEQCSLKQLAQQFGTPLYVYSKQAFEKHYTDMDRAFNFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LG+G DIV+ GEL R LAA ++VFSG+GKT +I+ AL GI Sbjct: 60 SNSNLAVLGVLAKLGAGFDIVTGGELARVLAAGGDPAKVVFSGLGKTEIDIEKALNVGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL + + A LG+KAP++ RVNPD++A TH ISTG KE+KFGIP + Sbjct: 120 CFNVESHAELDRIQKVAKKLGQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDSVFE 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++LP + I G+D HIGSQ+ + + F A + + + +QL G ++HID+GGGL Sbjct: 180 TYQYAASLPNLNIVGIDCHIGSQLTETKPFVDALERVMLMIEQLNELGIQLKHIDIGGGL 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP+ +YA + L K+ +EPGR + A+ GIL+T+V +K + + Sbjct: 240 GVTYKDE-VPPTVQEYADALKPALQKLGLKVYMEPGRSISANAGILLTRVDLLKPTNHRN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+ + V P D DIVG ICETGDF+ RK+A Sbjct: 299 FAIIDAAMNDLIRPALYEAWMD-IQPVEPHQDIQEKEWDIVGAICETGDFLGKERKLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 DLL + GAYG V S YN+R E+MVN Q +++R R T + L E + + Sbjct: 357 AENDLLAVLGAGAYGFVMSSNYNTRARAAEVMVNNHQAYLVRERETIESLWEREHL 412 >gi|83748189|ref|ZP_00945216.1| Diaminopimelate decarboxylase [Ralstonia solanacearum UW551] gi|83725157|gb|EAP72308.1| Diaminopimelate decarboxylase [Ralstonia solanacearum UW551] Length = 419 Score = 299 bits (764), Expect = 8e-79, Method: Composition-based stats. Identities = 181/419 (43%), Positives = 258/419 (61%), Gaps = 6/419 (1%) Query: 1 MS-AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS + +G+L E V+LE +A TP Y YS A+ NY ++ A +G + V YA+ Sbjct: 1 MSESLIRQDGALMVEGVALEAIAAQFGTPTYVYSRAALTANYRAYAAACEGRNARVQYAM 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AV++ A LG+G DIVS GELRR LAA A +VFSGVGKT DE+ LAL++G+ Sbjct: 61 KANSNLAVLQIFAQLGAGFDIVSGGELRRVLAAGGKAADVVFSGVGKTADEMRLALEAGV 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVES EL LN+ A SLGK AP++ RVNPD++A TH ISTG K +KFG+ ++ Sbjct: 121 ACFNVESIPELHRLNEVAGSLGKTAPVSLRVNPDVDAKTHPYISTGLKGNKFGVAFEEVL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y A+ +P +++ G+D HIGSQI ++ + A + D+ +L G + HIDVGGG Sbjct: 181 PTYRAAAAMPNLRVVGIDCHIGSQITEVSPYLDAIDKVLDVVARLDGEGIRLSHIDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSA 297 LGI Y + P ++ +L+ + ++ EPGR LV + G+L+T+V +K A Sbjct: 241 LGITYTDETPPDITAFARTLLDRIEQRGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGA 300 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 K F I+D AMND RP +Y+AYH I + +G D+VGP+CE+GD++ +R + Sbjct: 301 AKNFCIVDAAMNDLARPAMYEAYHHIVPVRERSGAA--TVYDVVGPVCESGDWLGRDRAL 358 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +PGDLL I GAYG S YN+R E++V+G + H+ R R F++LI + + Sbjct: 359 -DVQPGDLLAILSAGAYGFTMSSNYNTRNRAAEVIVDGDRVHVARERERFEDLIRGEQL 416 >gi|237749545|ref|ZP_04580025.1| diaminopimelate decarboxylase [Oxalobacter formigenes OXCC13] gi|229380907|gb|EEO30998.1| diaminopimelate decarboxylase [Oxalobacter formigenes OXCC13] Length = 428 Score = 299 bits (764), Expect = 8e-79, Method: Composition-based stats. Identities = 163/426 (38%), Positives = 259/426 (60%), Gaps = 15/426 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT-----MVCY 57 F Y + +L+ + +SL++LA TP Y YS A+ +N+ +++ ++ +VCY Sbjct: 4 HFSYQDDTLNIDGISLKELAIEYGTPLYVYSKKALVENFRQYADTCKRFESDKIHSLVCY 63 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 ++K+NSN A++ L G+G DIVS GEL+R +AA +++FSGVGKT +EI LAL+ Sbjct: 64 SVKSNSNLAILNILGQEGAGFDIVSGGELQRVIAAGCDPRKVIFSGVGKTANEIGLALKH 123 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 I+CFN+ES +EL +NQ A +GK+A ++FRVNP+++ TH ISTG KE+KFGIP + Sbjct: 124 DIHCFNIESFAELHRINQVAQEMGKQARVSFRVNPNVDPKTHPYISTGLKENKFGIPYEE 183 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + Y A+++ + ++G+D HIGSQ+ +A L L QL G ++HID+G Sbjct: 184 ALACYKAAASMTNIDVTGIDCHIGSQLLDDAPLLEALDKLLHLVDQLSEEGITLKHIDIG 243 Query: 238 GGLGIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG+GI Y + S + Q + ++ EPGR + + G+L+T+V Sbjct: 244 GGIGITYDDEKPVAISDYLTRLFTRVENWRKQKHPDQSIGLMFEPGRSISGNAGLLLTQV 303 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 +K ++DK F I+D AMND MRP+LY+A+H++ + N G+ DIVGP+CE+GD+ Sbjct: 304 QYLKTNSDKNFAIVDAAMNDLMRPSLYEAWHKVLPVSNRKGEA--TSYDIVGPVCESGDW 361 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 +A R++ + + D+L I GAYG + YN+R E++V+ ++IR R T +EL Sbjct: 362 LAKQREL-VIQADDILAIMSAGAYGMAMASNYNTRGRAAEVLVDNGNAYLIRRRETPEEL 420 Query: 411 IELDSI 416 L+S+ Sbjct: 421 FALESV 426 >gi|311109535|ref|YP_003982388.1| diaminopimelate decarboxylase [Achromobacter xylosoxidans A8] gi|310764224|gb|ADP19673.1| diaminopimelate decarboxylase 2 [Achromobacter xylosoxidans A8] Length = 430 Score = 299 bits (764), Expect = 9e-79, Method: Composition-based stats. Identities = 183/418 (43%), Positives = 258/418 (61%), Gaps = 6/418 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F++ L+AE+V L+ LA + TP Y YS A++ + ++ NA +VCY +KAN Sbjct: 16 YFQFRNNVLYAEDVPLDHLAEKLGTPLYVYSRAALKAAWESYRNAVGQHPVLVCYGMKAN 75 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+K A LG+G DIVS GEL+RALAA RIVFSGVGK E+ AL + + CF Sbjct: 76 SNLAVLKEFARLGAGFDIVSGGELKRALAAGADPSRIVFSGVGKQAWEMRAALAAQVKCF 135 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL+ L++ A +G +AP++ RVNPD++A TH ISTG KE+KFGI I +Y Sbjct: 136 NVESEAELRRLSEVAHGMGLRAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIESALDVY 195 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A +LPG+ I GVD HIGSQ+ I + A + L DL ++L G I H+D+GGGLGI Sbjct: 196 RSAQSLPGLDIVGVDCHIGSQLTDISPYFDALEKLLDLIEKLDQAGIRIAHLDLGGGLGI 255 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P G +++LEPGR LV + G+L+T+V +K S + Sbjct: 256 RYTDEIPPSPQVLLDRVFERLNARGFGHLQLVLEPGRSLVGNAGVLLTRVQYLKHSEARN 315 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+H + + AGD DIVGP+CE+ D++A RK+A Sbjct: 316 FAIVDAAMNDLLRPALYEAFHGVRPVHPRAGDA--TLYDIVGPVCESADWLAKQRKLA-I 372 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 GDLL +E TGAY + YN+R E MV+G +++++R R T +L+ + ++P Sbjct: 373 EQGDLLAVESTGAYSMAMASNYNARPRAAEAMVDGDKYYVVRQRETLDDLLRGESTLP 430 >gi|291484767|dbj|BAI85842.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. natto BEST195] Length = 441 Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats. Identities = 133/422 (31%), Positives = 201/422 (47%), Gaps = 15/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V LA TP Y Y I + +F AF G+ V YA KA S+ A Sbjct: 15 GHLEIGGVDALYLAEKYGTPLYVYDVALIRERAKSFKQAFIFAGLKAQVAYASKAFSSVA 74 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I+ G LD+VS GEL A+AA PAERI F G K+ +E+ +AL+ I C V++ Sbjct: 75 MIQLAEEEGLSLDVVSGGELYTAVAAGFPAERIHFHGNNKSREELRMALEHRIGCIVVDN 134 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--Y 184 E+ L G + R+ P + A+TH I+TG+++ KFG +H + A Sbjct: 135 FYEIALLEDLCKETGHSIDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQ 194 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIA 243 +++ GV HIGSQI F A + + + R + +++GGG GI Sbjct: 195 VLQSEHIQLLGVHCHIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIR 254 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P +++Y I + +G +I +EPGR LV D G + V S K+ Sbjct: 255 YTEDDEPLHATEYVEKIIEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEV 314 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D MND +RP LY A +E N G+ I G CE+GD + + Sbjct: 315 PGVRQYVAVDGGMNDNIRPALYQAKYEAAA-ANRIGEAHDKTVSIAGKCCESGDMLIWDI 373 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GDLL + TGAYG + YN + V + H++ R T++++++LD Sbjct: 374 DLPEVKEGDLLAVFCTGAYGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVKLD- 432 Query: 416 IP 417 +P Sbjct: 433 LP 434 >gi|1304007|dbj|BAA12662.1| LysA [Bacillus subtilis] Length = 441 Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats. Identities = 133/422 (31%), Positives = 201/422 (47%), Gaps = 15/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V LA TP Y Y I + +F AF G+ V YA KA S+ A Sbjct: 15 GHLEIGGVDALYLAEKYGTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVA 74 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I+ G LD+VS GEL A+AA PAERI F G K+ +E+ +AL+ I C V++ Sbjct: 75 MIQLAEEEGLSLDVVSGGELYTAVAAGFPAERIHFHGNNKSREELRMALEHRIGCIVVDN 134 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--Y 184 E+ L G + R+ P + A+TH I+TG+++ KFG +H + A Sbjct: 135 FYEIALLEDLCKETGHSIDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQ 194 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIA 243 +++ GV HIGSQI F A + + + R + +++GGG GI Sbjct: 195 VLQSEHIQLLGVHCHIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIR 254 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P +++Y I + +G +I +EPGR LV D G + V S K+ Sbjct: 255 YTEDDEPLHATEYVEKIIEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEV 314 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D MND +RP LY A +E N G+ I G CE+GD + + Sbjct: 315 PGVRQYVAVDGGMNDNIRPALYQAKYEAAA-ANRIGEAHDKTVSIAGKCCESGDMLIWDI 373 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GDLL + TGAYG + YN + V + H++ R T++++++LD Sbjct: 374 DLPEVKEGDLLAVFCTGAYGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVKLD- 432 Query: 416 IP 417 +P Sbjct: 433 LP 434 >gi|16079395|ref|NP_390219.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. 168] gi|221310255|ref|ZP_03592102.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. 168] gi|221314579|ref|ZP_03596384.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319501|ref|ZP_03600795.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323777|ref|ZP_03605071.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. SMY] gi|321311813|ref|YP_004204100.1| diaminopimelate decarboxylase [Bacillus subtilis BSn5] gi|226694207|sp|P23630|DCDA_BACSU RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|410117|gb|AAA67473.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. 168] gi|2634773|emb|CAB14270.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis str. 168] gi|320018087|gb|ADV93073.1| diaminopimelate decarboxylase [Bacillus subtilis BSn5] Length = 439 Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats. Identities = 133/422 (31%), Positives = 201/422 (47%), Gaps = 15/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V LA TP Y Y I + +F AF G+ V YA KA S+ A Sbjct: 13 GHLEIGGVDALYLAEKYGTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I+ G LD+VS GEL A+AA PAERI F G K+ +E+ +AL+ I C V++ Sbjct: 73 MIQLAEEEGLSLDVVSGGELYTAVAAGFPAERIHFHGNNKSREELRMALEHRIGCIVVDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--Y 184 E+ L G + R+ P + A+TH I+TG+++ KFG +H + A Sbjct: 133 FYEIALLEDLCKETGHSIDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQ 192 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIA 243 +++ GV HIGSQI F A + + + R + +++GGG GI Sbjct: 193 VLQSEHIQLLGVHCHIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIR 252 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P +++Y I + +G +I +EPGR LV D G + V S K+ Sbjct: 253 YTEDDEPLHATEYVEKIIEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEV 312 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D MND +RP LY A +E N G+ I G CE+GD + + Sbjct: 313 PGVRQYVAVDGGMNDNIRPALYQAKYEAAA-ANRIGEAHDKTVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GDLL + TGAYG + YN + V + H++ R T++++++LD Sbjct: 372 DLPEVKEGDLLAVFCTGAYGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVKLD- 430 Query: 416 IP 417 +P Sbjct: 431 LP 432 >gi|328954155|ref|YP_004371489.1| diaminopimelate decarboxylase [Desulfobacca acetoxidans DSM 11109] gi|328454479|gb|AEB10308.1| diaminopimelate decarboxylase [Desulfobacca acetoxidans DSM 11109] Length = 420 Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats. Identities = 189/417 (45%), Positives = 265/417 (63%), Gaps = 3/417 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G L+ E V++ +A V TPFY YS ++ ++ F AF +VC+A+K Sbjct: 1 MHHFHYSNGQLYCEGVAVAAIAAKVGTPFYLYSHATLQHHFQVFDRAFGETPHLVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A+++ + G G+DIVS GEL RAL A V ++V+SGVGK DEI AL+ GI Sbjct: 61 SNSNLAILRIFINQGGGVDIVSGGELFRALRAGVAPGKVVYSGVGKRPDEIRYALEQGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN+ES EL+ LNQ A +G++A IA RVNPD++ TH ISTG K++KFGI I + + Sbjct: 121 MFNIESPQELQVLNQAAGQMGRRARIALRVNPDVDPQTHPYISTGLKQNKFGIDIDRSVA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A LP ++I GV HIGSQ+ Q+ F + L++L +LR I+++D+GGGL Sbjct: 181 EYLIAKQLPHLEIVGVACHIGSQLTQLSPFIETLGRLKELIARLRREDIQIRYLDIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y+ + PP +Y I Q L C +ILEPGR LV + GILVTKV+ K++ K Sbjct: 241 GIQYNEE-TPPHPVEYGRSIIQELQGLDCTLILEPGRVLVGNAGILVTKVLFTKQTEAKY 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I D AMND RP+LY +YH I +V DR + A +VGPICE+GDF+A +R + Sbjct: 300 FIIADAAMNDLARPSLYGSYHGIQPVVE--KDRREVTASLVGPICESGDFLAKDRLMPAF 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 PG+L+ + GAYG S YNSR +PEI+V+ ++F++IR R T+++LI + IP Sbjct: 358 DPGELVAVMSAGAYGFTMSSNYNSRPRVPEILVHKNEFYVIRQRETYEDLIRGEEIP 414 >gi|241762096|ref|ZP_04760179.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373346|gb|EER62946.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 421 Score = 298 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 186/424 (43%), Positives = 257/424 (60%), Gaps = 7/424 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD---TMVCY 57 M F G+L E++ L ++A TP Y YS + + + F+ A DG +V + Sbjct: 1 MIPFSLKNGTLCVEDIPLPEIAAQYGTPCYVYSHSYLTERARRFTKALDGAGKGKALVAF 60 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+KAN +QA++ + A G G D+VS GE+RRA+ A +P ERIVFSGVGKT +E+ AL+ Sbjct: 61 AVKANPSQAILASFAKEGLGADVVSAGEIRRAVHAGIPPERIVFSGVGKTAEEMRYALEI 120 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 GI FN+ES SE++ L + A SLGKKA +A R+NPD++ +TH KI+TGK + KFGI Sbjct: 121 GIGQFNIESVSEIEMLAEVAASLGKKAAVALRINPDVDPHTHAKIATGKADTKFGIAAED 180 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 S Y ++ P +KI G+ HIGSQI + F A + + ++ L GH I+ D+G Sbjct: 181 ALSAYEKLASYPSLKIQGIASHIGSQITDLAPFEAAAERIYEIITALEKAGHAIETADLG 240 Query: 238 GGLG-IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 GGLG PPS Y +I + C++I EPGR L+A+ GIL++KVI +K+S Sbjct: 241 GGLGVRYKDDQPEPPSIEAYGEMIKRVTKGWNCRLIFEPGRSLIANAGILLSKVIRVKES 300 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 FVILD AMND +RPTLYDAYHEI ADIVGP+CETGD A NR Sbjct: 301 KTARFVILDAAMNDLVRPTLYDAYHEI---KAVTPSAQAYQADIVGPVCETGDIFARNRS 357 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 I +P DL+ I GAYGA + YNSR L+ E+MV+G++ +IR R + ++L+ + Sbjct: 358 IPAVKPDDLVAIMSAGAYGATMASAYNSRPLVAEVMVSGNKSALIRKRQSVEDLMRDEQK 417 Query: 417 PAWL 420 WL Sbjct: 418 VEWL 421 >gi|268323184|emb|CBH36772.1| diaminopimelate decarboxylase [uncultured archaeon] Length = 419 Score = 298 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 144/418 (34%), Positives = 239/418 (57%), Gaps = 11/418 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L V +LA TP Y + N+ ++++AF D YA+KAN N A++ Sbjct: 6 GHLVFGGVDAVELAETYGTPLYVTDEDMLRNNFRSYNSAFKSADK--YYAVKANGNLAIL 63 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 K LA G+G D+ S GEL+ +A +P ++I+F+G K+ +E+ +++G+ +V+S Sbjct: 64 KILASEGAGADVFSGGELQLVKSAGIPRDKILFNGNSKSEEELRAVVEAGVK-VSVDSHD 122 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E++TL+ AV++ K+ IA RVNPD++ + KI+TG +E KFGIP +++ + A L Sbjct: 123 EMRTLSAIAVAMDKEVEIAIRVNPDVSPKVNPKIATGLRESKFGIPFYEVIATCEDAKML 182 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 P + ++G+ HIGSQI + F +A + + +L ++L + G ++ +D+GGGLGI++ + Sbjct: 183 PNITLTGLHCHIGSQILDVSVFSEATEKMMNLVEELYARGMELEFVDLGGGLGISHRKEE 242 Query: 249 RPPSSSDYASLIHQYFGNLQC------KIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 + P+ +D A I F K++LEPGR +V IL+ +V ++K++ K FV Sbjct: 243 KAPTPNDLADAILPTFDARLDSLGIKLKLVLEPGRSIVGPATILLCRVNTVKQA-YKNFV 301 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +D N FMRP +Y AYHE+ N ++ + +VGP+CE+GD +A +R + Sbjct: 302 AIDAGFNLFMRPVMYGAYHEVVV-ANKLNEQASVLCTVVGPVCESGDILAKDRMLPEVER 360 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 GDL+ I GAYG S YN R E+++ + +IR + + +LI IP L Sbjct: 361 GDLVAILNAGAYGFSMSSQYNGRPRCAEVLICDGKVDVIRTKESVDDLIRNQVIPPRL 418 >gi|71279638|ref|YP_267983.1| diaminopimelate decarboxylase [Colwellia psychrerythraea 34H] gi|71145378|gb|AAZ25851.1| diaminopimelate decarboxylase [Colwellia psychrerythraea 34H] Length = 420 Score = 298 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 209/419 (49%), Positives = 295/419 (70%), Gaps = 3/419 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 S F + + EN++L +A VQTPFYCYS+TAIE ++ + NAF D ++CYA+KA Sbjct: 5 SYFPHKNNEMFVENIALSDIAQHVQTPFYCYSSTAIETSFQAYKNAFSSQDALICYAVKA 64 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSNQAV+ TLA LGSG D+VS GE+RRA+ A +PA++IV+SGV KT +EI AL GI+ Sbjct: 65 NSNQAVLATLAKLGSGADVVSMGEIRRAITAGIPADKIVYSGVAKTEEEIHYALSLGIFQ 124 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVESE EL+ +++ A SL K A IAFR+NPD+ A TH KISTGK E+KFG+PI + Sbjct: 125 FNVESEPELELISKVATSLNKTAAIAFRINPDVCAQTHAKISTGKAENKFGVPISKARIA 184 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A++LPG+K+ GVD+HIGSQ+ + F +A++ + +L +LR++GH I +DVGGGLG Sbjct: 185 YKRAASLPGIKVQGVDVHIGSQLTSLAPFEEAYQRIAELVNELRADGHEISVVDVGGGLG 244 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 I Y + PS YA L+ G+L CKII+EPGR L+ + GILV+ V+ IK ++ F Sbjct: 245 ITYLDE-IIPSKQSYADLVKAQLGHLNCKIIIEPGRSLLGNAGILVSSVVFIKNGEERQF 303 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 +ILD MND +RP++Y+AYH+I + A + D+VGP+CETGD A R++ Sbjct: 304 LILDAGMNDLIRPSMYEAYHQIIAVNKGANE--LKTYDVVGPVCETGDTFAKARQVHKSD 361 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 GDL+ I +GAYG+V S +YN+R+L PE+MV G++F I++ R +++E+I+ D IP+WL Sbjct: 362 AGDLIAIMSSGAYGSVMSSSYNTRMLAPEVMVKGNEFAIVKKRPSYEEIIKQDIIPSWL 420 >gi|222109911|ref|YP_002552175.1| diaminopimelate decarboxylase [Acidovorax ebreus TPSY] gi|221729355|gb|ACM32175.1| diaminopimelate decarboxylase [Acidovorax ebreus TPSY] Length = 431 Score = 298 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 168/416 (40%), Positives = 248/416 (59%), Gaps = 3/416 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 Y + +L E + L LA TP Y YS A+ + F G +CYA+KAN Sbjct: 11 HLHYHDQALQLEGLRLADLAREFGTPLYVYSQAAMLDALGAYQRGFAGRKVQICYAMKAN 70 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ AV++ A G G DIVS GEL+R +AA +++FSGVGKT E+ AL+ GI CF Sbjct: 71 SSLAVLQLFARHGCGFDIVSAGELQRVIAAGGDPAKVIFSGVGKTRAEMRQALEVGIGCF 130 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL+ L++ A S+G +API+ RVNP+++A TH ISTG K +KFGI + + Y Sbjct: 131 NVESEAELEVLSEVAQSMGLRAPISIRVNPNVDAKTHPYISTGLKGNKFGIAHERTVATY 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LPG+++ G+D HIGSQI + + A + DL Q + + G + HID GGGLGI Sbjct: 191 QRAAALPGLRVVGIDCHIGSQITEESPYLDAMDRMLDLVQAIEAAGIAVHHIDFGGGLGI 250 Query: 243 AYHSDHRPPSSSDYASLIH--QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y+ D P + + +A L+ G ++++EPGR LV + G+ +T+V+ +K K Sbjct: 251 DYNGDTPPRADALWAKLLAKLDARGYGDRQLMIEPGRSLVGNAGVCLTEVLYLKPGEQKN 310 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y AYH I + A + D+VGPICE+GD+I +R +A Sbjct: 311 FCIVDAAMNDLPRPAMYQAYHAIVPLQATAPTAVSHVYDVVGPICESGDWIGRDRNLA-V 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD+L + GAY + TYN+R E++V+G++ H+IR R + ++ + + Sbjct: 370 AAGDMLAVLSAGAYCSSMGSTYNTRPRPAEVLVDGARAHLIRTRESVNDIFRSEKL 425 >gi|37196770|dbj|BAC92756.1| diaminopimelate decarboxylase [Methylophilus methylotrophus] Length = 414 Score = 298 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 187/418 (44%), Positives = 254/418 (60%), Gaps = 5/418 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+AF +G LHAENV+L +A QTP Y YS A+ + F G D ++C+A+K Sbjct: 1 MTAFSIQQGLLHAENVALRDIAQTHQTPTYVYSRAALTTAFERFQAGLTGHDHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN + A++ A +G+G DIVS GEL R LAA +++VFSGVGK+ EI AL++GI Sbjct: 61 ANPSLAILNLFARMGAGFDIVSGGELARVLAAGGDPKKVVFSGVGKSHAEIKAALEAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL + Q A SLGKKAPI+ RVNP+++A TH ISTG K +KFG+ Sbjct: 121 CFNVESVNELDRIQQVAASLGKKAPISLRVNPNVDAKTHPYISTGLKNNKFGVAFEDALG 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY A+ LP +++ GVD HIGSQI ++ F A + L L + G +IQHIDVGGG+ Sbjct: 181 LYEKAAQLPNIEVHGVDCHIGSQITELSPFLDALDKVLGLVDALAAKGIHIQHIDVGGGV 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PP + Y + I + K++ EPGR LV + G+L+TKV +K K Sbjct: 241 GITYSDE-TPPDFAAYTAAILKKLAGRNVKVLFEPGRALVGNAGVLLTKVEYLKPGETKN 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND MRP LYDA+H I I +IVGP+CE+GDF+ +R +A Sbjct: 300 FAIVDAAMNDLMRPALYDAFHNITTIA--TSAAPAQIYEIVGPVCESGDFLGHDRTLA-I 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS-IP 417 GD L I GAYG + YN+R E++V+G Q H+IR R +L +L+ +P Sbjct: 357 EEGDYLAIHSAGAYGMSMASNYNTRARAAEVLVDGDQVHVIREREQIADLFKLERTLP 414 >gi|186477550|ref|YP_001859020.1| diaminopimelate decarboxylase [Burkholderia phymatum STM815] gi|184194009|gb|ACC71974.1| diaminopimelate decarboxylase [Burkholderia phymatum STM815] Length = 420 Score = 298 bits (762), Expect = 2e-78, Method: Composition-based stats. Identities = 180/420 (42%), Positives = 251/420 (59%), Gaps = 6/420 (1%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 SAF Y +G LHAE VS LA TP Y YS A+ K + +++A G V A+KA Sbjct: 4 SAFAYVDGVLHAEGVSAVSLAEQFGTPLYVYSRDALTKAWHAYADACAGRRATVHVAVKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN AV+ A +G+G DIVS GEL R LAA AE VFSGVGK++ E+ AL +G+ C Sbjct: 64 NSNLAVLNLFARMGAGFDIVSGGELARVLAAGGKAENTVFSGVGKSVAEMRDALAAGVKC 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVES EL LN A +GKKAP++ RVNPD++A TH ISTG K +KFG+ + Sbjct: 124 FNVESIPELDRLNAVAGEMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFDDARAT 183 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A+ + + + G+D HIGSQI ++ + A L +L Q+ ++G I+H+DVGGGLG Sbjct: 184 YRAAAAMKHLDVVGIDCHIGSQITEVAPYLDAVDKLLELVAQIEADGVTIKHVDVGGGLG 243 Query: 242 IAYHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 I Y + P + + G+ ++ EPGR LV + G+L+T+V +K A+K Sbjct: 244 ITYDDETPPDIGDFVRTLLDRIEARGHGHREVYFEPGRSLVGNAGMLLTRVEFLKTGAEK 303 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND RP +Y+AYH I +V D DIVGP+CE+GD++ R++A Sbjct: 304 NFAIVDAAMNDLARPAMYEAYHAIEPVVQR--DGARHVYDIVGPVCESGDWLGRERRLA- 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 PGDLL I GAYG S YN+R E+MV+G + +++R R ++L + +P+ Sbjct: 361 VEPGDLLAIRSAGAYGFAMSSNYNTRARAAEVMVDGDKAYVVRKREEVKDLFAGESVLPS 420 >gi|300690200|ref|YP_003751195.1| diaminopimelate decarboxylase [Ralstonia solanacearum PSI07] gi|299077260|emb|CBJ49886.1| Diaminopimelate decarboxylase [Ralstonia solanacearum PSI07] Length = 419 Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 180/419 (42%), Positives = 257/419 (61%), Gaps = 6/419 (1%) Query: 1 MS-AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS + +G+L E V+LE +A TP Y YS A+ NY ++ A + + V YA+ Sbjct: 1 MSESLIRQDGALMVEGVALEAIAAQFGTPTYVYSRAALTANYRAYAAACESRNARVQYAM 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AV++ A LG+G DIVS GELRR LAA A +VFSGVGKT DE+ LAL++G+ Sbjct: 61 KANSNLAVLQIFAQLGAGFDIVSGGELRRVLAAGGKAANVVFSGVGKTADEMRLALEAGV 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVES EL LN+ A SLGK AP++ R+NPD++A TH ISTG K +KFG+ ++ Sbjct: 121 ACFNVESIPELHRLNEVAGSLGKTAPVSLRINPDVDAKTHPYISTGLKGNKFGVAFEEVL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y A+ +P +++ G+D HIGSQI ++ + A + D+ +L + G + HIDVGGG Sbjct: 181 PTYRAAAAMPNLRMVGIDCHIGSQITEVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSA 297 LGI Y + P ++ +L+ + ++ EPGR LV + G+L+T+V +K A Sbjct: 241 LGITYTDETPPDITAFARTLLDRIEQRGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGA 300 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 K F I+D AMND RP +Y+AYH I + G DIVGP+CE+GD++ +R + Sbjct: 301 AKNFCIVDAAMNDLARPAMYEAYHHIVPVRERGG--APTVYDIVGPVCESGDWLGRDRAL 358 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +PGDLL I GAYG S YN+R E++V+G + H+ R R F++LI + + Sbjct: 359 -DVQPGDLLAILSAGAYGFTMSSNYNTRNRAAEVIVDGDRVHVARERERFEDLIRGEQL 416 >gi|121593140|ref|YP_985036.1| diaminopimelate decarboxylase [Acidovorax sp. JS42] gi|120605220|gb|ABM40960.1| diaminopimelate decarboxylase [Acidovorax sp. JS42] Length = 431 Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 168/416 (40%), Positives = 247/416 (59%), Gaps = 3/416 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 Y + +L E + L LA TP Y YS A+ + F G +CYA+KAN Sbjct: 11 HLHYHDQALQLEGLRLADLAREFGTPLYVYSHAAMLDALGAYQRGFAGRKVQICYAMKAN 70 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ AV++ A G G DIVS GEL+R +AA +++FSGVGKT E+ AL+ GI CF Sbjct: 71 SSLAVLQLFARHGCGFDIVSAGELQRVIAAGGDPAKVIFSGVGKTRAEMRQALEVGIGCF 130 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL L++ A S+G +API+ RVNP+++A TH ISTG K +KFGI + + Y Sbjct: 131 NVESEAELDVLSEVAQSMGLRAPISIRVNPNVDAKTHPYISTGLKGNKFGIAHERTVATY 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LPG+++ G+D HIGSQI + + A + DL Q + + G + HID GGGLGI Sbjct: 191 QRAAALPGLRVVGIDCHIGSQITEESPYLDAMDRMLDLVQAIEAAGIAVHHIDFGGGLGI 250 Query: 243 AYHSDHRPPSSSDYASLIH--QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y+ D P + + +A L+ G ++++EPGR LV + G+ +T+V+ +K K Sbjct: 251 DYNGDTPPRADALWAKLLAKLDARGYGDRQLMIEPGRSLVGNAGVCLTEVLYLKPGEQKN 310 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y AYH I + A + D+VGPICE+GD+I +R +A Sbjct: 311 FCIVDAAMNDLPRPAMYQAYHAIVPLQATAPTAVSHVYDVVGPICESGDWIGRDRNLA-V 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD+L + GAY + TYN+R E++V+G++ H+IR R + ++ + + Sbjct: 370 AAGDMLAVLSAGAYCSSMGSTYNTRPRPAEVLVDGARAHLIRTRESVNDIFRSEKL 425 >gi|262373159|ref|ZP_06066438.1| diaminopimelate decarboxylase [Acinetobacter junii SH205] gi|262313184|gb|EEY94269.1| diaminopimelate decarboxylase [Acinetobacter junii SH205] Length = 416 Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 188/416 (45%), Positives = 264/416 (63%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F G LHAE SL++LA TP Y YS +EK+YL AFD +D +C+A+K Sbjct: 1 MS-FTRINGVLHAEQCSLDQLALQFGTPLYVYSKATLEKHYLDMDRAFDFIDHQICFAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN AV+ LA LG+G DIV+ GEL R LAA +IVFSG+GK+ +I+ AL GI Sbjct: 60 SNSNLAVLNVLAKLGAGFDIVTGGELARVLAAGGNPAKIVFSGLGKSEADIEKALDVGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL + + A LGKKAPI+ RVNPD++A TH ISTG KE+KFGIP ++ Sbjct: 120 CFNVESYAELDRIQKVAAKLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYE 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y YA++LP ++I G+D HIGSQ+ + + F A + + ++L+ G N++HID+GGGL Sbjct: 180 TYQYAASLPNLEIVGIDCHIGSQLTETKPFVDALDRVVLMIEELKKLGINLKHIDIGGGL 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP+ ++YA+ + L K+ +EPGR + A+ G L+TKV +K + + Sbjct: 240 GVRYKDE-TPPTVAEYANAMRPVLEKLGLKVYMEPGRSISANAGALLTKVDLLKPTNHRN 298 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+A+ + V P D D+VG ICETGDF+ R +A Sbjct: 299 FAIIDAAMNDLIRPALYEAWMD-IQSVAPHSDVEVKTWDLVGAICETGDFLGKQRDLA-L 356 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + D+L + GAYG V S YN+R E+MV+G Q ++IR R T + L E + + Sbjct: 357 QENDVLAVLGAGAYGFVMSSNYNTRGRAAEVMVSGDQAYLIRERETIESLWEKERL 412 >gi|300702820|ref|YP_003744421.1| diaminopimelate decarboxylase [Ralstonia solanacearum CFBP2957] gi|299070482|emb|CBJ41777.1| Diaminopimelate decarboxylase [Ralstonia solanacearum CFBP2957] Length = 419 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 181/419 (43%), Positives = 258/419 (61%), Gaps = 6/419 (1%) Query: 1 MS-AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS + +G+L E V+LE +A TP Y YS A+ NY ++ A +G + V YA+ Sbjct: 1 MSESLIRQDGALMVEGVALEAIAAQFGTPTYVYSRAALTANYRAYAAACEGRNARVQYAM 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AV++ A LG+G DIVS GELRR LAA A +VFSGVGKT DE+ LAL++G+ Sbjct: 61 KANSNLAVLQIFAQLGAGFDIVSGGELRRVLAAGGKAADVVFSGVGKTADEMRLALEAGV 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVES EL LN+ A SLGK AP++ RVNPD++A TH ISTG K +KFGI ++ Sbjct: 121 ACFNVESIPELHRLNEVAGSLGKTAPVSLRVNPDVDAKTHPYISTGLKGNKFGIAFEEVL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y A+ +P +++ G+D HIGSQI ++ + A + D+ +L + G + HIDVGGG Sbjct: 181 PTYRAAAAMPNLRVVGIDCHIGSQITEVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSA 297 LGI Y + P ++ +L+ + ++ EPGR LV + G+L+T+V +K A Sbjct: 241 LGITYTDETPPDITAFARTLLDRIEQRGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGA 300 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 K F I+D AMND RP +Y+AYH I + G D+VGP+CE+GD++ +R + Sbjct: 301 AKNFCIVDAAMNDLARPAMYEAYHHIVPVRERGGAA--TVYDVVGPVCESGDWLGRDRAL 358 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +PGDLL I GAYG S YN+R E++V+G + H+ R R F++L+ + + Sbjct: 359 -DVQPGDLLAILSAGAYGFTMSSNYNTRNRAAEVIVDGDRVHVARERERFEDLVRGEQL 416 >gi|296332270|ref|ZP_06874732.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674971|ref|YP_003866643.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150584|gb|EFG91471.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413215|gb|ADM38334.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. spizizenii str. W23] Length = 439 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 133/422 (31%), Positives = 200/422 (47%), Gaps = 15/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V LA TP Y Y I + +F AF G+ V YA KA S+ A Sbjct: 13 GHLEIGGVDALYLAEKYGTPLYVYDVALIRERAKSFKQAFITAGLKAQVAYASKAFSSVA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I+ G LD+VS GEL A+AA PAERI F G K +E+ +AL+ I C V++ Sbjct: 73 MIQLAEEEGLSLDVVSGGELYTAVAAGFPAERIHFHGNNKGREELRMALEHRIGCIVVDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--Y 184 E+ L G + R+ P + A+TH I+TG+++ KFG +H + A Sbjct: 133 FYEISLLEDLCEETGHSIDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQ 192 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIA 243 +++ GV HIGSQI F A + + + R + +++GGG GI Sbjct: 193 VLQSEHIQLLGVHCHIGSQIFDTAGFVLAAEKIFKKLDEWRESYSFVSKVLNLGGGFGIR 252 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P +++Y I + +G +I +EPGR LV D G + V S K+ Sbjct: 253 YTEDDEPLHATEYVEKIIEAVKENAARYGFNIPEIWIEPGRSLVGDAGTTLYTVGSQKEV 312 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D MND +RP LY A +E N G+ I G CE+GD + + Sbjct: 313 PGVRQYVAVDGGMNDNIRPALYQAKYEAAT-ANRIGEAHDKTVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GDLL + TGAYG + YN + V + H++ R T++++++LD Sbjct: 372 DLPEVKEGDLLAVFCTGAYGYSMANNYNRIPRPAVVFVENGEDHLVVKRETYEDIVKLD- 430 Query: 416 IP 417 +P Sbjct: 431 LP 432 >gi|269925950|ref|YP_003322573.1| diaminopimelate decarboxylase [Thermobaculum terrenum ATCC BAA-798] gi|269789610|gb|ACZ41751.1| diaminopimelate decarboxylase [Thermobaculum terrenum ATCC BAA-798] Length = 418 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 168/412 (40%), Positives = 248/412 (60%), Gaps = 4/412 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +L+ E+V L L QTP Y YS I Y +F G T +CY+LK+N Sbjct: 5 AFHYRGDTLYCEDVPLVDLVKEYQTPLYVYSANYIRNAYQKLKESFGGFPTKICYSLKSN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 N + K LA LG+G D+ S GEL RAL A E IVF+GVGK+ EI AL+SG+ F Sbjct: 65 PNIWIGKLLADLGAGADVTSGGELFRALKAGFNPEDIVFAGVGKSSREIVEALRSGVGLF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ++ESE EL+ +++ A SL + A I+ RVNP+I+ +TH+KI+TG + +KFG+PI + +Y Sbjct: 125 SIESEQELRKISELAQSLNRVANISIRVNPNIDPHTHEKITTGLRSNKFGVPIEEALRVY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A TLP ++I G+ MHIGSQ+ ++ +A + D+ ++L + G +++ID+GGG GI Sbjct: 185 QLACTLPAIRIVGIGMHIGSQLVNLDPVIQAANTILDMAEELINTGIRLEYIDIGGGFGI 244 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + A + + +L+ K+I+EPGRF+ G L+T V+ K S K FV Sbjct: 245 KYKDESPE-DPEIVAKALERRLRDLKLKLIIEPGRFISGPSGALLTSVLYTKTSGGKKFV 303 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D MN +RP LYDAYH I +V D+VGPICE+ D++A +R + P Sbjct: 304 IVDAGMNALIRPALYDAYHHIQPLVRRD---KTEIVDVVGPICESSDYLAKDRLLPQVFP 360 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + + I + GAYG + YNS EI+V+G++ +IR R T+++LI L+ Sbjct: 361 TETIAILQAGAYGFAMASEYNSHPRPAEILVDGNKVRLIRKRQTYEDLIRLE 412 >gi|134096284|ref|YP_001101359.1| diaminopimelate decarboxylase [Herminiimonas arsenicoxydans] gi|133740187|emb|CAL63238.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Herminiimonas arsenicoxydans] Length = 427 Score = 297 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 171/428 (39%), Positives = 250/428 (58%), Gaps = 15/428 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-----TMV 55 MS F Y +G L AE+ L ++A +P Y YS A+ +N+ ++++A +V Sbjct: 1 MSHFSYQDGVLCAEHTPLTQIARQFGSPTYIYSKAALVENFSSYADACKKHGRTDDTALV 60 Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 CY++K+NSN AV++ L LGSG DIVS GEL R LAA +++FSGVGK+ +E+ LAL Sbjct: 61 CYSVKSNSNLAVLQLLGKLGSGFDIVSGGELLRVLAAGGSPRKVIFSGVGKSREEMQLAL 120 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 I CFNVES EL LN+ A +GK+A ++ RVNP+++A TH ISTG K++KFG+ Sbjct: 121 SHDILCFNVESIPELHRLNEVAGEMGKRASVSLRVNPNVDAKTHPYISTGLKDNKFGVAY 180 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 + Y AS LP + + G+D HIGSQ+ +A L +L L + G I H+D Sbjct: 181 EDALTTYRVASALPNISVVGIDCHIGSQLLDDAPLLEAVDKLIELIDALAAEGIVIHHLD 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVT 288 +GGG+GI Y +D A + K++ EPGR +V + GIL+T Sbjct: 241 IGGGIGINYDNDKPVAVGDYLARVFAKVDAWRAKNHAGAPIKVLFEPGRSIVGNAGILLT 300 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 +V IK K F I+D AMND MRP +Y+A+H + ++ D+VGP+CE+G Sbjct: 301 EVQYIKHGETKNFAIVDAAMNDLMRPAMYEAWHGVQPVLQRH--VAAQTYDVVGPVCESG 358 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D++A +R++A + GDLL I GAYG S YN+R E+MV+G+ H+IR R Sbjct: 359 DWLARSRELA-IQEGDLLAIMSAGAYGMTMSSNYNTRGRAAEVMVDGATVHLIRKRELAS 417 Query: 409 ELIELDSI 416 +L L+++ Sbjct: 418 DLFALETL 425 >gi|223939745|ref|ZP_03631617.1| diaminopimelate decarboxylase [bacterium Ellin514] gi|223891616|gb|EEF58105.1| diaminopimelate decarboxylase [bacterium Ellin514] Length = 432 Score = 297 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 176/433 (40%), Positives = 261/433 (60%), Gaps = 17/433 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y + ENVS+E L +P Y YS + +++ A +D ++C+ALK Sbjct: 1 MHYFRYVGNKFYCENVSVESLVKKYGSPLYIYSQRTLTEHFQKLDQALAPVDHLICFALK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSNQAV++TLA LG G DIVS GEL+RA+AA + VF+GVGKT EI+ AL+ G+Y Sbjct: 61 SNSNQAVLRTLADLGGGFDIVSSGELQRAIAAGADPRKCVFAGVGKTESEIEFALKKGVY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE EL+ +N+ A L K APIA RVNP+++A+TH KI+TG ++KFGI I I Sbjct: 121 SFNVESEPELQRINRIAGRLKKIAPIAVRVNPNVDAHTHAKITTGTYDNKFGIAIENIEG 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG- 239 +YA AS L +K+ G+ MHIGSQ+ +E F +A K + L ++L+ H ++ +GGG Sbjct: 181 VYARASKLKNIKLRGLQMHIGSQLTSVEPFEQAVKKVSPLVERLK-KKHGLEFFSIGGGL 239 Query: 240 -------------LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 + + + YA+ + L +I++EPGRF+ + GIL Sbjct: 240 GIVYDPALESSNPEWWRTTKGKKILTPTLYATRLVPLLKPLGLRILMEPGRFISGNAGIL 299 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 VT++ +K++ K F+I+D AMND +RP YDAYHEI + G I +D+VGPICE Sbjct: 300 VTRIEYVKRTGKKNFLIVDAAMNDLIRPAFYDAYHEIVPLTRKNGQ--LISSDVVGPICE 357 Query: 347 TGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 +GDF A +R + GD L + GAYG V + YN+R + E++VNG++ ++R R Sbjct: 358 SGDFFAKDRPLPKLGEGDHLALLSAGAYGFVMASNYNTRSMAAEVLVNGNKSALVRERQP 417 Query: 407 FQELIELDSIPAW 419 +E+ +++ W Sbjct: 418 VEEIWAGETVAPW 430 >gi|260753687|ref|YP_003226580.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553050|gb|ACV75996.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 421 Score = 297 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 185/424 (43%), Positives = 256/424 (60%), Gaps = 7/424 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD---TMVCY 57 M F G+L E++ L ++A TP Y YS + + + F+ A DG +V + Sbjct: 1 MIPFSLKNGTLCVEDIPLPEIAAQYGTPCYVYSHSYLTERARRFTKALDGAGKGKALVAF 60 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+KAN +QA++ + A G G D+VS GE+ RA+ A +P ERIVFSGVGKT +E+ AL+ Sbjct: 61 AVKANPSQAILASFAKEGLGADVVSAGEIHRAVHAGIPPERIVFSGVGKTAEEMRYALEI 120 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 GI FN+ES SE++ L + A SLGKKA +A R+NPD++ +TH KI+TGK + KFGI Sbjct: 121 GIGQFNIESVSEIEMLAEVATSLGKKAAVALRINPDVDPHTHAKIATGKADTKFGIAAED 180 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 S Y ++ P +KI G+ HIGSQI + F A + + ++ L GH I+ D+G Sbjct: 181 ALSAYEKLASYPSLKIQGIASHIGSQITDLAPFEAAAERIYEIITALEKAGHTIETADLG 240 Query: 238 GGLG-IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 GGLG PPS Y +I + C++I EPGR L+A+ GIL++KVI +K+S Sbjct: 241 GGLGVRYKDDQPEPPSIEAYGEMIKRVTKGWNCRLIFEPGRSLIANAGILLSKVIRVKES 300 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 FVILD AMND +RPTLYDAYHEI ADIVGP+CETGD A NR Sbjct: 301 KTARFVILDAAMNDLVRPTLYDAYHEI---KAVTPSVQAYQADIVGPVCETGDIFAGNRS 357 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 I +P DL+ I GAYGA + YNSR L+ E+MV+G++ +IR R + ++L+ + Sbjct: 358 IPAVKPDDLVAIMSAGAYGATMASAYNSRPLVAEVMVSGNKSALIRKRQSVEDLMRDEQK 417 Query: 417 PAWL 420 WL Sbjct: 418 VEWL 421 >gi|163859235|ref|YP_001633533.1| hypothetical protein Bpet4914 [Bordetella petrii DSM 12804] gi|163262963|emb|CAP45266.1| lysA [Bordetella petrii] Length = 430 Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats. Identities = 188/418 (44%), Positives = 264/418 (63%), Gaps = 6/418 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y G LHAE V+L+ LA + TP Y YS A+ + + T+S+A +VCY +KAN Sbjct: 16 HFHYQNGILHAEGVALDALASQLGTPLYVYSRAALAQAWRTYSDAIGTRPVLVCYGMKAN 75 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+K A LG+G DIVS GEL+R LAA ++VFSGVGK E+ AL++G+ CF Sbjct: 76 SNLAVLKEFARLGAGFDIVSGGELKRVLAAGGNPAKVVFSGVGKQAWEMRAALEAGVKCF 135 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES++EL+ L+ A S+G++A ++ RVNPD++A TH ISTG KE+KFGI I Y Sbjct: 136 NVESQAELQCLSDVAQSMGQRARVSLRVNPDVDAQTHPYISTGLKENKFGIAIESALDAY 195 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LPG++I GVD HIGSQ+ I + A + L DL +QL + G IQH+D+GGGLGI Sbjct: 196 RTAAALPGLEIVGVDCHIGSQLTDISPYFDALEKLLDLIEQLDAAGIAIQHLDLGGGLGI 255 Query: 243 AYHSDHRPPSSSDYASLIH--QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + + Q G ++LEPGR LV + G+L+T V +K + + Sbjct: 256 RYTDEIPPSPKALLDQVFERLQARGMAHLHLVLEPGRSLVGNAGVLLTTVQYLKHAQARN 315 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LYDAYH + + D I DIVGP+CE+ D++A RK+A Sbjct: 316 FAIVDAAMNDLLRPALYDAYHGVQPVA--PRDGAAIEYDIVGPVCESADWLARQRKLA-L 372 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 + GD+L +E GAY V + YN+R E+MV+GS+ +I+R R T +L+ + ++P Sbjct: 373 QAGDVLALESAGAYAMVMASNYNTRARAAEVMVDGSRHYIVRQRETLDDLLRGESTLP 430 >gi|326315781|ref|YP_004233453.1| diaminopimelate decarboxylase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372617|gb|ADX44886.1| diaminopimelate decarboxylase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 427 Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats. Identities = 168/418 (40%), Positives = 245/418 (58%), Gaps = 3/418 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 Y L E+V LA + TP Y YS ++ + F G +CYA+KAN Sbjct: 11 HIAYRGDDLFIESVRAADLAQELGTPLYVYSRASMLSALEAYQRGFAGRKVQICYAMKAN 70 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ AV++ A G G DIVS GELRR LAA A +++FSGVGKT E+ AL++GI CF Sbjct: 71 SSLAVLQLFARAGCGFDIVSAGELRRVLAAGGEAGKVIFSGVGKTRQEMREALEAGIGCF 130 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE EL+ L++ A++ G++AP++ RVNP+++ TH ISTG K +KFG+ + + Y Sbjct: 131 NVESEPELEVLSEVAMACGRRAPVSIRVNPNVDPKTHPYISTGLKGNKFGVAHERTVATY 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LPG+++ G+D HIGSQI + + A + DL Q+ S G I HID GGGLGI Sbjct: 191 QRAAALPGLQVVGIDCHIGSQITEATPYLDAVDRMLDLVAQIESAGIPIHHIDFGGGLGI 250 Query: 243 AYHSDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y+ D P + + + L+ + G + ++EPGR LV + G+ +T+V+ +K K Sbjct: 251 DYNGDTPPAADALWTQLLARLDARGYGDRQFMIEPGRSLVGNAGVCLTEVLYVKPGEQKN 310 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y A+H I + PA D+VGP+CE+GD+I +R +A Sbjct: 311 FCIVDAAMNDLPRPAMYQAFHGIVPVAAPAPGAAPAVYDVVGPVCESGDWIGRDRTLA-V 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 R GD L + GAY + YN+R E++V+G Q H+IR R ++ + +P Sbjct: 370 RSGDRLAVLSAGAYCSSMGSNYNTRARPAEVLVDGGQAHLIRVREPLEDTFRHEKLPG 427 >gi|56420835|ref|YP_148153.1| diaminopimelate decarboxylase [Geobacillus kaustophilus HTA426] gi|56380677|dbj|BAD76585.1| diaminopimelate decarboxylase [Geobacillus kaustophilus HTA426] Length = 439 Score = 296 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 130/424 (30%), Positives = 197/424 (46%), Gaps = 15/424 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSN 64 +G L V + +LA TP Y Y I F AF V YA KA S Sbjct: 11 EQGHLEIGGVDVVELAKTYGTPLYIYDVALIRARARAFKEAFQRHGVRAQVAYASKAFSA 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+++ A G LD+VS GEL ALAA P ERI F G K+ DE+ +AL+ GI C Sbjct: 71 VAIVQLAAEEGLSLDVVSGGELYTALAAGFPPERIHFHGNNKSRDELAMALEHGIGCIVA 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--Y 182 ++ EL+ + + A S G+ P+ RV P + A+TH I TG+++ KFG ++ + + Sbjct: 131 DNFYELELIEELAASCGRTVPVLLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEAF 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLG 241 ++ GV HIGSQI + F A + + + + +G +++GGG G Sbjct: 191 RRVMASAAFQLLGVHCHIGSQIFETAGFVLAAQKVFAKLAEWNKEHGFVPAVVNLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y + P + Y + +I +EPGR LV D G + + S K Sbjct: 251 IRYTEEDDPIPVTAYVDCIVEEVKRQAEACRLPLPEIWIEPGRSLVGDAGTTIYTIGSRK 310 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + I +D M+D +RP LY A +E G+ I G CE+GD + Sbjct: 311 EVPNVRTYIAVDGGMSDNIRPALYGAKYEAALANRVFGE-PTEVVSIAGKCCESGDMLIW 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + +PGD L + TGAYG + YN + V ++ R T+++LI+ Sbjct: 370 DIALPEAKPGDYLAVFCTGAYGYSMANNYNRLPRPAVVFVENGDAQLVVKRETYEDLIQY 429 Query: 414 DSIP 417 D +P Sbjct: 430 D-LP 432 >gi|317401523|gb|EFV82153.1| diaminopimelate decarboxylase [Achromobacter xylosoxidans C54] Length = 430 Score = 296 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 179/418 (42%), Positives = 258/418 (61%), Gaps = 6/418 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F+Y L+AE+V L+ LA + TP Y YS A+ + T+ +A +VCY +KAN Sbjct: 16 YFQYRNNVLYAEDVPLDHLAGQLGTPLYVYSRAALRAAWDTYRSAVGQRPVLVCYGMKAN 75 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN A++K A LG+G DIVS GEL+RALAA +IVFSGVGK + E+ AL +G+ CF Sbjct: 76 SNLAILKEFARLGAGFDIVSGGELKRALAAGADPAKIVFSGVGKQVWEMRAALAAGVMCF 135 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL+ L+ A G++A ++ RVNPD++A TH ISTG KE+KFGIPI Y Sbjct: 136 NVESEAELQRLSDVAQEAGQRARVSLRVNPDVDAQTHPYISTGLKENKFGIPIGAALDAY 195 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A LPG++I+G+D HIGSQ+ I + A + L DL L G + H+D+GGGLGI Sbjct: 196 RSARLLPGLEITGLDCHIGSQLTDISPYFDALEKLLDLVADLEGIGIRLSHLDLGGGLGI 255 Query: 243 AYHSDHRPPSSSDYASLIH--QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y+ + P + + Q G +++LEPGR LV + G+L+T V +K + Sbjct: 256 RYNDEMPPSPKALLDHVFQRLQARGQDHLRLVLEPGRSLVGNAGVLLTTVQYLKHGEARN 315 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND +RP LYDA+H + + AGD I D+VGP+CE+ D++A R + + Sbjct: 316 FAVVDAAMNDLLRPALYDAWHGLQPLRPRAGD--TIDYDVVGPVCESADWLARQRAL-VL 372 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 D+L +E GAYG +G YN+R E+MV+G +H++R R T +L+ + ++P Sbjct: 373 EQDDVLALESAGAYGMTMAGNYNTRPRAAEVMVDGGHYHVVRQRETLDDLLRGESTLP 430 >gi|226952075|ref|ZP_03822539.1| diaminopimelate decarboxylase [Acinetobacter sp. ATCC 27244] gi|226837167|gb|EEH69550.1| diaminopimelate decarboxylase [Acinetobacter sp. ATCC 27244] Length = 407 Score = 296 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 186/406 (45%), Positives = 260/406 (64%), Gaps = 3/406 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 +HAE SL++LA TP Y YS +EK+YL AFD +D +C+A+K+NSN AV+ Sbjct: 1 MHAEQCSLDQLAQQYGTPLYVYSKATLEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNV 60 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 LA LG+G DIV+ GEL R LAA +IVFSG+GK+ +I+ AL GI CFNVES +EL Sbjct: 61 LAKLGAGFDIVTGGELARVLAAGGDPAKIVFSGLGKSEADIEKALTVGIACFNVESHAEL 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGKKAPI+ RVNPD++A TH ISTG KE+KFGIP + + Y YA++L Sbjct: 121 DRIQKVAAKLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVDATYQYAASLSN 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++I G+D HIGSQ+ + + F A + + +QL+ G N++HID+GGGLG+ Y + P Sbjct: 181 LEIVGIDCHIGSQLTETKPFVDALDRVILMIEQLKKLGINLKHIDIGGGLGVCYKDE-TP 239 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P+ ++YA+ + L K+ +EPGR + A+ G L+TKV +K + + F I+D AMND Sbjct: 240 PTVAEYANSMRPALEKLGLKVYMEPGRSISANAGTLLTKVDLLKPTNHRNFAIIDAAMND 299 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 +RP LY+A+ + VNP D D+VG ICETGDF+ R +A + D+L + Sbjct: 300 LIRPALYEAWMD-IQSVNPNSDVEVKTWDLVGAICETGDFLGKERNLA-LQENDVLAVLG 357 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GAYG V S YNSR E+MVNG Q ++IR R T + L E + + Sbjct: 358 AGAYGFVMSSNYNSRGRAAEVMVNGDQAYLIRERETIESLWEKERL 403 >gi|56461656|ref|YP_156937.1| diaminopimelate decarboxylase [Idiomarina loihiensis L2TR] gi|56180666|gb|AAV83388.1| Diaminopimelate decarboxylase [Idiomarina loihiensis L2TR] Length = 420 Score = 296 bits (757), Expect = 6e-78, Method: Composition-based stats. Identities = 173/417 (41%), Positives = 246/417 (58%), Gaps = 4/417 (0%) Query: 1 MSAF-KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y G H EN +E L +P Y YS I KN+ F + +CYA+ Sbjct: 1 MSELIDYKNGQFHIENCDVESLIERFSSPLYVYSKGQILKNWREFQQYWP-APHKLCYAV 59 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN A+++ LA G+G DIVS GEL+R L A A +VFSGV K+ DEI +AL++GI Sbjct: 60 KANSNLAILQLLAEHGAGFDIVSGGELQRVLMAGGKAGDVVFSGVAKSKDEIIMALEAGI 119 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE+EL+ + A ++ K+AP++ RVNPD++A TH I+TG K +KFGI + Sbjct: 120 GCFNVESEAELERIQDIAAAMDKQAPVSLRVNPDVDAKTHPYIATGMKANKFGISMSLAK 179 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++ A +LP + + G D HIGSQI E F A + + +L +L +G + H+D+GGG Sbjct: 180 PVFLKAHSLPNINLIGADCHIGSQIMTAEPFLDAAQRMFNLVSELEKDGVQLTHLDLGGG 239 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 G+AY + S L+ Q ++LEPGR + AD G+L+T V IK S DK Sbjct: 240 FGVAYQPEEPLDKSFYLKELVKLAENYPQITLVLEPGRAITADAGVLLTTVEYIKPSEDK 299 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV++D MND +RP+LY A+H+I ++ DIVGP+CETGDF R + Sbjct: 300 NFVLVDAGMNDLIRPSLYQAWHDILPAHENKRGGDQLN-DIVGPVCETGDFFGHARHLN- 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD+L I+ GAYG + YNSR PE++V+G +IR R +F +L+ + + Sbjct: 358 VQQGDVLAIKHAGAYGFTMASNYNSRGRPPEVLVSGDNATLIRERESFNDLVRGEHL 414 >gi|16126452|ref|NP_421016.1| diaminopimelate decarboxylase [Caulobacter crescentus CB15] gi|221235233|ref|YP_002517669.1| diaminopimelate decarboxylase [Caulobacter crescentus NA1000] gi|13423716|gb|AAK24184.1| diaminopimelate decarboxylase [Caulobacter crescentus CB15] gi|220964405|gb|ACL95761.1| diaminopimelate decarboxylase [Caulobacter crescentus NA1000] Length = 421 Score = 295 bits (756), Expect = 7e-78, Method: Composition-based stats. Identities = 181/424 (42%), Positives = 267/424 (62%), Gaps = 7/424 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG---MDTMVCY 57 M+ F+Y L E V L K+A V TP Y YS +E++++ F +A +D ++ Y Sbjct: 1 MNHFEYGPQGLACEGVPLAKIAAEVGTPVYVYSRATLERHFVVFRDALAMSGVVDPLIAY 60 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+KANSN AV+K L LG+G D VSEGE+RRALAA +P ERIVFSGVGK EI ALQ+ Sbjct: 61 AVKANSNVAVLKVLGDLGAGADTVSEGEVRRALAAGIPGERIVFSGVGKARREIAFALQA 120 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G+ NVESE EL + + A LG +A +AFRVNPD+ A H KI+TGK E+KFG+ + Sbjct: 121 GVAEINVESEPELNLIAEVAAELGVRAKVAFRVNPDVAAGGHAKIATGKSENKFGVSFAE 180 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 LYA AS ++ GV HIGSQI + AF +R L +QL + G +++ +D+G Sbjct: 181 AARLYANASNNANLQPVGVACHIGSQITDLAPMRAAFTKMRGLVEQLLAEGLSVERLDLG 240 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GGLG+ Y + PPS +++A+++ + L + EPGR + A+ G+LV++VI + + Sbjct: 241 GGLGVPYFNHPEPPSPAEFAAMVGEVTQGLPVTLAFEPGRVIAANAGVLVSEVIHVHERP 300 Query: 298 -DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + F+++D AMND +RP +YDA+H+I ++ G+ D+VGP+CETGD +R Sbjct: 301 EGRKFLVIDAAMNDLVRPAMYDAFHDIRPVIQRTGE---TVYDVVGPVCETGDTFTRDRA 357 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDL+ GAYGA + YN+R L+PE++V+G ++ +IR R T+ E++ D + Sbjct: 358 LPPFAAGDLVAFMSAGAYGAAMASEYNTRPLVPEVLVDGDRYAVIRQRPTYDEMLARDLV 417 Query: 417 PAWL 420 P W+ Sbjct: 418 PDWV 421 >gi|299137487|ref|ZP_07030669.1| diaminopimelate decarboxylase [Acidobacterium sp. MP5ACTX8] gi|298600892|gb|EFI57048.1| diaminopimelate decarboxylase [Acidobacterium sp. MP5ACTX8] Length = 423 Score = 295 bits (756), Expect = 7e-78, Method: Composition-based stats. Identities = 183/416 (43%), Positives = 249/416 (59%), Gaps = 5/416 (1%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F Y L L +LA TP Y YS AI + F G+ +CYA+KANS Sbjct: 10 FVYAGSRLECSGADLSELAAQFGTPLYVYSGDAIAERARMLQQEFAGVLHTICYAVKANS 69 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA-ERIVFSGVGKTIDEIDLALQSGIYCF 122 + AV++ L LG G DIVS GEL R A A R+VFSGVGK E+D AL +GI F Sbjct: 70 SLAVMRMLGELGCGFDIVSGGELERVRRAAPEALGRVVFSGVGKQAWEMDAALDAGILLF 129 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL+ L +RA +LGK A IA RVNPD+ A TH ISTG +E KFGI I + +Y Sbjct: 130 NVESEAELEVLAERAQALGKIARIALRVNPDVFAETHPYISTGLREHKFGIAIERAREVY 189 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A + G++ +GV +HIGSQI +E F +A + +R L + LR +G +I+++D GGG GI Sbjct: 190 QRAVRMQGIEPAGVSVHIGSQIRSVEPFAEAVRRVRSLVEDLRGDGMDIRYVDAGGGFGI 249 Query: 243 AYHSDHRPPSSS--DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y P++ +YA + + L ++LEPGRFLVA G L+T+V+ K++ K Sbjct: 250 EYGKAEFDPAARVAEYARALREVLDGLNAHLLLEPGRFLVAQAGALLTRVLYTKQNGKKH 309 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI D AMND +RP LY A+HEI +V +R ADIVGP+CE+GDF A +R+ Sbjct: 310 FVITDAAMNDLIRPALYQAHHEIVPVVK--DERAVQVADIVGPVCESGDFFARDRETQEL 367 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 R GDL+ + GAYG + YN+R+ E++V + +IR R T +L+ + I Sbjct: 368 RQGDLVVLLDAGAYGMSLASHYNTRVRPAEVLVEQGRARLIRRRETLDDLLAAELI 423 >gi|163793816|ref|ZP_02187790.1| D-3-phosphoglycerate dehydrogenase [alpha proteobacterium BAL199] gi|159180927|gb|EDP65444.1| D-3-phosphoglycerate dehydrogenase [alpha proteobacterium BAL199] Length = 420 Score = 295 bits (756), Expect = 7e-78, Method: Composition-based stats. Identities = 187/420 (44%), Positives = 271/420 (64%), Gaps = 2/420 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+ +G+L ENV L +A V TP Y YS AI Y + A D + + YA+K Sbjct: 1 MQGFEIRDGALAVENVPLATIAEQVGTPAYVYSAGAIRTRYRALAAALDPLGIAIHYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQA+I L LG+G D+VS GEL RALAA +PA+RIVF+GVGKT DE+ AL +GI+ Sbjct: 61 ANSNQAIITLLRGLGAGADVVSGGELARALAAGIPADRIVFAGVGKTRDEMAAALDAGIH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN+ESE EL+TL + A S G A + RVNP+++A TH KI+TGK E+KFG+PI + + Sbjct: 121 LFNIESEPELETLAEVARSKGTTARVGLRVNPNVDAKTHAKITTGKAENKFGVPIERAPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +A A L GV+ G+ +HIGSQI +E + + + +R++ LR+ G+ ++++D+GG Sbjct: 181 FFARAGELSGVEAVGLSVHIGSQILDLEPYRQTYVRVREMALTLRAQGYGLRNLDLGG-G 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 + P A++I + G+L ++ +EPGR+LV G+L+ +VI +K+ K Sbjct: 240 LGIGYRGEEGPDPQGLAAIIKEQLGDLDFELAVEPGRWLVGAAGVLLARVILVKQGETKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 V++D AMND +RPTLY+ +H I +V + ADIVGPICE+GD++A +R + Sbjct: 300 HVVVDAAMNDLIRPTLYEGFHRIEPVVGRDRADAGM-ADIVGPICESGDYLAKDRPLPAV 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 G+LL + GAYGAV S TYN+R L PE++V+G ++ +IRPR + LI LD +P WL Sbjct: 359 AAGELLVVRDAGAYGAVMSSTYNARPLAPEVLVDGDRWTVIRPRQSVDALIALDKVPDWL 418 >gi|20808385|ref|NP_623556.1| diaminopimelate decarboxylase [Thermoanaerobacter tengcongensis MB4] gi|20516997|gb|AAM25160.1| Diaminopimelate decarboxylase [Thermoanaerobacter tengcongensis MB4] Length = 445 Score = 295 bits (756), Expect = 8e-78, Method: Composition-based stats. Identities = 131/432 (30%), Positives = 202/432 (46%), Gaps = 14/432 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQ 65 +G L LA TP Y + +N F N F V YA KA Sbjct: 11 KGHLEIGGCDTVALAKKFGTPLYVIDEELLRQNCRAFYNGFKRDYPGNEVIYASKAFMTM 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ K + GLD+VS GEL AL A P E+I F G K+ +E+ +AL++ I V+ Sbjct: 71 AICKIIEEENLGLDVVSGGELYTALKAGFPPEKIYFHGNNKSREELIMALENDIGKIIVD 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL LN+ A + K I RV+P I A+TH+ + TG+ + KFG P+ ++ A Sbjct: 131 NWHELNMLNELARKMNKVPNIYIRVSPGIEAHTHQYVKTGQIDSKFGFPLFNGDAMRAIE 190 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGI 242 YA TL V + G+ HIGSQI S+ +++ + + G ++ +D+GGG GI Sbjct: 191 YALTLKNVNLVGLHSHIGSQIFDSYSYKAEIEIMMNFIKLIKEFLGWEVEELDLGGGFGI 250 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKK 295 AY + P A + Q KII+EPGR ++ + G + V +IK+ Sbjct: 251 AYTEEDDPQPIEKIAHEMMQSVKEYSVSLNVKMPKIIVEPGRSIIGNAGTTLYTVGAIKE 310 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LY A +E R+ I G +CE+GD + + Sbjct: 311 IPGIRKYVAVDGGMSDNIRTALYGAKYEAIVANKARLPRV-EKVSIAGKLCESGDMLIWD 369 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD+L + TGAY + YN ++V+ Q +I R T+++L+ D Sbjct: 370 ILLPEIEEGDILAVLSTGAYNYSMASNYNRLPRPAAVLVSNGQADVIVERETYEDLVRKD 429 Query: 415 SIPAWLQKTPKQ 426 IP L ++ Sbjct: 430 VIPERLLSVKRK 441 >gi|319956050|ref|YP_004167313.1| diaminopimelate decarboxylase [Nitratifractor salsuginis DSM 16511] gi|319418454|gb|ADV45564.1| diaminopimelate decarboxylase [Nitratifractor salsuginis DSM 16511] Length = 407 Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats. Identities = 167/401 (41%), Positives = 234/401 (58%), Gaps = 2/401 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + LA TP Y Y + +NY AF G +++ YA+KANSN +VI LG Sbjct: 3 IDFHALAEKYGTPLYVYDFDQMRENYRRLKEAFAGSKSLIAYAVKANSNLSVISLFGKLG 62 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G D VS GE+ RA A + RI+FSGVGK DEI+ AL+ GI N+ESE+E+ + + Sbjct: 63 AGADCVSLGEILRARTAGIEPYRIIFSGVGKRDDEIEAALKEGILMINLESEAEMHRVEE 122 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A LG++A I+ RVNP+++ TH ISTG E+KFG+ I + +Y YA + G Sbjct: 123 VAQRLGQEARISIRVNPNVDPQTHPYISTGLHENKFGVEIDRAKRMYIYAKNSDWLDPVG 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIGSQ+ ++E +A ++ DL + L + G I+ DVGGGLG+ Y + P + Sbjct: 183 IHFHIGSQLTELEPIKEAASIVADLVRSLAAIGIEIRFFDVGGGLGVVYRDE-TPIDVEE 241 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA +I + L II EPGR+L A+ G L+T+V+ K + K FVI+D AMND MRPT Sbjct: 242 YAKVITESIKGLDLTIICEPGRYLTANAGWLLTRVLYEKNNGAKRFVIVDAAMNDLMRPT 301 Query: 316 LYDAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 LY AYH + Y+ A +R AD+VGPICE+GD++A R + R GDLL I GAY Sbjct: 302 LYQAYHGVEYLEPDAKERGEATPADLVGPICESGDWLAKERLLPPTRSGDLLAIRSAGAY 361 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 G + YN+R E+ Q +IR R F++ I L+ Sbjct: 362 GFTMASNYNTRGRPAEVACEQGQCRLIRDRENFEDQIRLEK 402 >gi|295690237|ref|YP_003593930.1| diaminopimelate decarboxylase [Caulobacter segnis ATCC 21756] gi|295432140|gb|ADG11312.1| diaminopimelate decarboxylase [Caulobacter segnis ATCC 21756] Length = 421 Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats. Identities = 183/424 (43%), Positives = 266/424 (62%), Gaps = 7/424 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCY 57 M+ F+Y L E V L K+A V TP Y YS +E+++ F +A +D ++ Y Sbjct: 1 MNHFEYGPEGLACEGVPLAKIAAEVGTPVYVYSRATLERHFTVFRDALALAGVVDPLIAY 60 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+KANSN AV+K L LG+G D VSEGE+RRALAA +P ERIVFSGVGKT EI AL + Sbjct: 61 AVKANSNVAVLKVLGDLGAGADTVSEGEIRRALAAGIPGERIVFSGVGKTRREIAFALTT 120 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G+ NVESE EL + Q A LG KA +AFRVNPD+ A H KI+TGK E+KFG+ + Sbjct: 121 GVAEINVESEPELDLIAQVAAELGVKAKVAFRVNPDVAAGGHAKIATGKSENKFGVSFAE 180 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 LYA AS ++ GV HIGSQI +E AF +R L +QL G +++ +D+G Sbjct: 181 AARLYANASNNSSLEPVGVACHIGSQITDLEPMRAAFTKMRGLVEQLLGEGLSVERLDLG 240 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GGLG+ Y + PPS + +A+++ + L + EPGR + A+ G+LV++V+ + + Sbjct: 241 GGLGVPYFNSPEPPSPAAFAAMVGEVTQGLPVTLAFEPGRVIAANAGVLVSEVVHVHERP 300 Query: 298 -DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + F+++D AMND +RP +YDA+H+I ++ G+ D+VGP+CETGD +R Sbjct: 301 EGRKFLVIDAAMNDLIRPAMYDAFHDIRPVIQRGGE---TVYDVVGPVCETGDTFTRDRA 357 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDL+ GAYGA + YN+R L+PE++V+G ++ +IR R T++E++ D + Sbjct: 358 LPPFTTGDLVAFMSAGAYGAAMASEYNTRPLVPEVLVDGDRYAVIRKRPTYEEILARDLV 417 Query: 417 PAWL 420 P W+ Sbjct: 418 PDWV 421 >gi|223038682|ref|ZP_03608975.1| diaminopimelate decarboxylase [Campylobacter rectus RM3267] gi|222880084|gb|EEF15172.1| diaminopimelate decarboxylase [Campylobacter rectus RM3267] Length = 413 Score = 295 bits (755), Expect = 9e-78, Method: Composition-based stats. Identities = 162/410 (39%), Positives = 232/410 (56%), Gaps = 11/410 (2%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + LA TP Y Y + Y NAF ++VCYA+KANSN +V+K LA LG Sbjct: 1 MDFTNLAQKYGTPLYIYDFDYMAHRYEALKNAFHARKSLVCYAVKANSNLSVLKFLAGLG 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G D VS GE+RRAL A + +I+ SGVGK DE+ AL++ I N+ESE+E+ L Sbjct: 61 AGFDCVSVGEVRRALLAGAKSYQIILSGVGKRDDELKFALENEILMINLESEAEMNRLES 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L K A I+ RVNPDI+A TH ISTG E+KFG+ +Y +A P ++ G Sbjct: 121 IAKQLDKPARISIRVNPDIDAKTHPYISTGLNENKFGVDPQTAKKMYLHAKNSPYLEPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIGSQ+ + +A K + +LT++L++ +I+ DVGGGLGI Y + P + Sbjct: 181 IHSHIGSQLTDVWPLIEAAKTVANLTRELKAVQIDIKFFDVGGGLGIIYGDESE-PDLYE 239 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L ++ EPGRF+ + G +T V+ K + DK FVI+D AMND +RP+ Sbjct: 240 YAQGILANLSGLDVTVVCEPGRFIAGNAGYFLTSVLYEKFNKDKRFVIVDGAMNDLIRPS 299 Query: 316 LYDAYHE----------INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 LY A H+ + D+VGPICE+GDF+A +R + PGDL Sbjct: 300 LYQARHKIFALSGGEIFDECKKEQLKELKFSPCDVVGPICESGDFLAKDRNLPPLNPGDL 359 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + I+ GAYG S YN+R + E+ V G + +IR R +F++++ L+ Sbjct: 360 VVIKSAGAYGFAMSSNYNTRGRVAEVAVKGGEDFLIRRRESFEDIVALEC 409 >gi|88705498|ref|ZP_01103208.1| Diaminopimelate decarboxylase [Congregibacter litoralis KT71] gi|88700011|gb|EAQ97120.1| Diaminopimelate decarboxylase [Congregibacter litoralis KT71] Length = 414 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 174/419 (41%), Positives = 256/419 (61%), Gaps = 7/419 (1%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F Y EG L AE + E LA TP Y YS A+E + +A G + +VCYA+KANS Sbjct: 3 FSYREGRLFAEELDCETLAEEYGTPCYLYSRAAMEAALAEYHDALSGCEHLVCYAVKANS 62 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N AV+ TLA G+G DIVS GEL R LAA ++VFSGV K +E+ AL+ GI CFN Sbjct: 63 NLAVLDTLARQGAGFDIVSVGELERVLAAGGDPGKVVFSGVVKRREEMHRALELGIRCFN 122 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 VESE+EL+ L + A +LGK+AP++ RVNPD++A TH ISTG +E+KFG+ L Sbjct: 123 VESEAELEVLQEVAAALGKRAPVSVRVNPDVDAGTHPYISTGLRENKFGVATDVAMKLLR 182 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + TLP + + G+D HIGSQ+ + ++ + L + L + G I H+D+GGG+G+ Sbjct: 183 HGKTLPNIDVIGLDCHIGSQLTDMAPLLESLRQLLVMVDTLEAEGIRIHHLDLGGGIGVR 242 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 Y + PP+ +DY + + + G+ + ++ EPGR +VA+ G+L+T+V K++ +F + Sbjct: 243 YKDE-EPPAIADYIAAVRKALGDRKLCLVFEPGRSIVANAGVLLTRVHYTKETDAHSFAL 301 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D AMNDF+RP LY A+ +I + +IVGP+CETGDF+ +R +A PG Sbjct: 302 VDAAMNDFIRPALYQAWVDIQTTA--PSEEPIRTWNIVGPVCETGDFLGKDRDLA-LAPG 358 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQK 422 LL I GAYG V S YN+R E+M++GS ++R R + +L+ + L++ Sbjct: 359 TLLAIHGAGAYGFVMSSNYNTRPRAAEVMIDGSSSQLVRERESIGDLLRGEH---RLRQ 414 >gi|307731218|ref|YP_003908442.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1003] gi|307585753|gb|ADN59151.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1003] Length = 420 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 183/419 (43%), Positives = 253/419 (60%), Gaps = 6/419 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G LHAE VS LA TP Y YS A+ + + +++A G V A+KAN Sbjct: 5 AFDYVDGVLHAEGVSAVSLAEQFGTPLYVYSRAALTEAWNAYASACAGRRASVHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+ A LG+G DIVS GEL R LAA AE VFSGVGK +E+ AL +G+ CF Sbjct: 65 SNLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKHANEMREALAAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A +GKKAP++ RVNPD++A TH ISTG K +KFG+ + + Y Sbjct: 125 NVESIPELDRLNAVAAQMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFDEARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ + +++ G+D HIGSQI ++ + A L +L +Q+ +G I+HIDVGGGLGI Sbjct: 185 QAAAAMANLEVVGIDCHIGSQITEVAPYLDAVDKLLELVEQIEQDGMTIRHIDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P S + + G+ ++ EPGR LV + G+L+T+V +K A+K Sbjct: 245 TYDDETPPDISDFVRTVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y+AYH I+ +V + D+VGP+CE+GD++ R +A Sbjct: 305 FAIVDAAMNDLARPAMYEAYHAIDAVVQR--ELPAHVYDVVGPVCESGDWLGRERLLA-V 361 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 PGDLL I GAYG V S YN+R E+MV+G+Q H++R R Q+L + +P Sbjct: 362 EPGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGTQAHVVRAREEVQQLFAGETVLPE 420 >gi|312137223|ref|YP_004004560.1| diaminopimelate decarboxylase [Methanothermus fervidus DSM 2088] gi|311224942|gb|ADP77798.1| diaminopimelate decarboxylase [Methanothermus fervidus DSM 2088] Length = 428 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 138/426 (32%), Positives = 203/426 (47%), Gaps = 16/426 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSN 64 +G L V +LA TP Y I +NY NAF + YA KAN+N Sbjct: 5 EKGHLVIGEVDAVELAEKYDTPLYVIDENKIRENYRRIYNAFKKRYDKFKILYACKANTN 64 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A++K L GSG+D VS GE+ AL A E I+F+G DE++ A++SG+ Sbjct: 65 IAIMKILNDEGSGIDAVSPGEIYIALVAGFKPEEILFTGNNVRNDELEFAVESGVMINID 124 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 + + ++ I+FR+NP + A H+ TG + KFGI Y+ Sbjct: 125 SISQLKRL---SKLCNPEEVEISFRINPLVGAGHHEHCITGGEMSKFGIAEKDAVKAYSM 181 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIA 243 A L KI G+ HIGS I F A L + +++ + G + ID+GGG GI Sbjct: 182 AKNLGF-KIKGIHCHIGSGILDPSPFLMAVDALTKIAERVSKEVGIEFEFIDIGGGFGIP 240 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKS 296 Y + + + A I + F + +EPGR++V + L+T+V +IKKS Sbjct: 241 YKPEEPELNIENLAKKIIEVFKERCDEYNLGNPWLYIEPGRYIVGNAACLLTRVNTIKKS 300 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + F +D N +RP +Y +YH I N A + DI G +CE+GD A +R+ Sbjct: 301 -YRKFAGVDAGFNTLIRPAMYGSYHHIIV-ANKANEEPCEKIDIAGNLCESGDIFARDRE 358 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD+L I GAY S YNSR E++V + IIR R + +L++ I Sbjct: 359 LPKLEEGDILAIMDAGAYCFSMSSQYNSRPRPAEVLVKDDKVSIIRERESIIDLLDKQVI 418 Query: 417 PAWLQK 422 PA L K Sbjct: 419 PARLLK 424 >gi|330999054|ref|ZP_08322778.1| diaminopimelate decarboxylase [Parasutterella excrementihominis YIT 11859] gi|329575641|gb|EGG57172.1| diaminopimelate decarboxylase [Parasutterella excrementihominis YIT 11859] Length = 437 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 170/416 (40%), Positives = 244/416 (58%), Gaps = 4/416 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F + +G+L ENV L+ LA TP Y YS AI + ++ + ++C+A+KAN Sbjct: 10 EFAWKDGTLWCENVPLKDLAARFGTPLYVYSKQAIVNAFQSYQKPLEPYKHLMCFAVKAN 69 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN ++I+ L LG+G DIVSEGELRR AA +++FSGV KT EI+ AL + I CF Sbjct: 70 SNLSIIRLLGKLGAGFDIVSEGELRRIQAAGCDTSKVIFSGVAKTYHEIEAALDADIKCF 129 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 N+ES +EL + A GKKA ++FRVNPD++A TH ISTG K++KFGI Q LY Sbjct: 130 NIESPAELDRVIAVAQKKGKKARVSFRVNPDVDAKTHPYISTGLKKNKFGIAYDQAVELY 189 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 AS P +++ G+D HIGSQI F A + L L +LR NG ++QHID GGGLGI Sbjct: 190 LKASRSPELEVVGIDCHIGSQITDTAPFVDACEKLCTLLDKLRLNGIDLQHIDFGGGLGI 249 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y ++ P + A+L ++I E GR LV + G L+ V +K+ K Sbjct: 250 QYSNEAVPSPTVLVAALRRVLVKRGYGDKEMIFEAGRSLVGNSGALLMTVQYMKQGELKN 309 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RPTLY A+ +I + ++ +VGP+CETGD++ +R + Sbjct: 310 FCIVDCGMNDMIRPTLYQAWMQIVPVTPKKEEKETYCY-VVGPVCETGDWLGKDRLLN-V 367 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDL+ + GAYG + YNSR L E++V+G++ +IR R +EL + + Sbjct: 368 QEGDLMALLSAGAYGMSMASNYNSRCLPAEVLVDGNRAALIRKRQCAEELFSDEIL 423 >gi|296159586|ref|ZP_06842410.1| diaminopimelate decarboxylase [Burkholderia sp. Ch1-1] gi|295890294|gb|EFG70088.1| diaminopimelate decarboxylase [Burkholderia sp. Ch1-1] Length = 420 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 183/417 (43%), Positives = 250/417 (59%), Gaps = 5/417 (1%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 SAF Y G LHAE VS LA TP Y YS A+ + + ++ A G V A+KA Sbjct: 4 SAFDYVNGVLHAEGVSAVSLAEQFGTPLYVYSRAALTEAWNAYAGACAGRRASVHVAVKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN AV+ A LG+G DIVS GEL R LAA AE VFSGVGK +E+ AL +G+ C Sbjct: 64 NSNLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKNANEMREALAAGVKC 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVES EL LN A +GKKAP++ RVNPD++A TH ISTG K +KFG+ + Sbjct: 124 FNVESIPELDRLNAVAAEMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARAT 183 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A+ + +++ G+D HIGSQI ++ + A + +L +Q+ +G I+HIDVGGGLG Sbjct: 184 YQAAAGMANLEVVGIDCHIGSQITEVAPYLDAVDKVLELVEQIEQDGLKIRHIDVGGGLG 243 Query: 242 IAYHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 I Y + P + + G+ ++ EPGR LV + G+L+T+V +K A+K Sbjct: 244 ITYDDETPPEIGEFVRTVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEK 303 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND RP +Y+AYH I+ +V D D+VGP+CE+GD++ R +A Sbjct: 304 NFAIVDAAMNDLARPAMYEAYHAIDPVVKH--DVPAHVYDVVGPVCESGDWLGRERLLA- 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL I GAYG V S YN+R E+MV+G+Q H+IR R ++L ++I Sbjct: 361 IEPGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGTQTHVIRAREEARQLFSGETI 417 >gi|289548601|ref|YP_003473589.1| diaminopimelate decarboxylase [Thermocrinis albus DSM 14484] gi|289182218|gb|ADC89462.1| diaminopimelate decarboxylase [Thermocrinis albus DSM 14484] Length = 416 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 166/410 (40%), Positives = 238/410 (58%), Gaps = 4/410 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 +Y + L E VSL +LA TP Y YS + I + +F G ++CYA+KAN Sbjct: 8 YLEYVKDELFLEGVSLRELAEKYGTPLYVYSASYIRDRLREYRESFPG--ALICYAVKAN 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 N ++ +A G+G DIVS GEL AL A V RIV++GVGKT+ E+ A+++ I F Sbjct: 66 FNPHIVSLMAGEGAGADIVSGGELYVALMAGVNPSRIVYAGVGKTVKELVEAIKADILMF 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL+ LNQ LGKK I+ RVNP ++ TH I+TG K+ KFGI I + Y Sbjct: 126 NVESRMELEILNQLGEQLGKKVRISIRVNPHVDPKTHPYIATGMKKSKFGIDIDRAEEEY 185 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 YA ++ +++ GV HIGSQI + +A + DL + L G +Q++D+GGGLGI Sbjct: 186 RYALSMKNIQVVGVHCHIGSQILDTSPYVEAVSKVVDLYRSLEDQGIELQYLDIGGGLGI 245 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + R + + +S + ++ ++LEPGR LV + G+L+T+V +K +K FV Sbjct: 246 KYKPEDRALTPMELSSALSPILQKVKATVVLEPGRSLVGNAGVLITQVQFVKDKGEKHFV 305 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D MND +RP +YDAYH I +V R I D+VGPICETGDF+A +R++ Sbjct: 306 IVDAGMNDLIRPAIYDAYHHILPVVKR--GRPSIVTDVVGPICETGDFLAKDRQLEEVGR 363 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 GD L + GAYG S YN R E++V+ +IR R +Q ++ Sbjct: 364 GDYLAVLSAGAYGFAMSSHYNVRPRACEVLVDRGYVRVIREREDYQYILS 413 >gi|319791909|ref|YP_004153549.1| diaminopimelate decarboxylase [Variovorax paradoxus EPS] gi|315594372|gb|ADU35438.1| diaminopimelate decarboxylase [Variovorax paradoxus EPS] Length = 422 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 163/416 (39%), Positives = 245/416 (58%), Gaps = 5/416 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 + +G+LH E ++L+ LA TP + YS + + F+G D ++CYA+KAN Sbjct: 10 HIAHRDGALHVEGLALDALAREHGTPLFVYSKQWMLDALAAYQRGFEGRDALICYAMKAN 69 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ V++ A G G DIVS GEL R LA ++I+FSGVGKT E+ AL +GI CF Sbjct: 70 SSLGVLRVFAEAGCGFDIVSGGELARVLAVGADPKKIIFSGVGKTRAEMRQALAAGIACF 129 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL LN+ A++ G +API+ R+NP+++ TH ISTG K +KFGI + Y Sbjct: 130 NVESEAELDVLNEVALAEGGRAPISIRINPNVDPKTHPYISTGLKGNKFGIAHDRAVEAY 189 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +A+ LPG+++ G+D HIGSQI + + A + DL + + + G I H+D GGGLGI Sbjct: 190 RHAARLPGLEVVGIDCHIGSQITEASPYLDACDRILDLVEAIEAAGVPIHHLDFGGGLGI 249 Query: 243 AYHSDHRPPSSSDYASLIH--QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y+ + P + + L+ G K+++EPGR LV + G+ VT+V+ K DK Sbjct: 250 DYNGEVPPKADDLWQQLLAKLDARGFGARKLVIEPGRSLVGNAGVCVTEVLYTKPGEDKN 309 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y A+ +I + G+ D+VGP+CE+GD+I +R + + Sbjct: 310 FCIVDAAMNDLPRPAMYQAFQKIVPLRIRTGEAP--TYDVVGPVCESGDWIGRDRALNVL 367 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAY S YN+R E++V+G +IR R T ++ + + + Sbjct: 368 -AGDLLAVLSAGAYCMSMSSNYNTRPRAAEVLVSGQSATLIRRRETMEDQLRNELV 422 >gi|85711583|ref|ZP_01042641.1| Diaminopimelate decarboxylase [Idiomarina baltica OS145] gi|85694735|gb|EAQ32675.1| Diaminopimelate decarboxylase [Idiomarina baltica OS145] Length = 417 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 172/416 (41%), Positives = 244/416 (58%), Gaps = 3/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS Y G LH E+ +L LA TP Y YS + I N+ F AF +CYA+K Sbjct: 1 MSQLSYKAGQLHIESNNLSALAEQFGTPLYVYSKSQILANWQKFR-AFWPSQHKLCYAVK 59 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN A+++ LA G+ DIVS GEL+R LAA A ++VFSGV K+ EI AL+ GI Sbjct: 60 ANSNLAILQLLAQHGAWFDIVSGGELKRVLAAGGSANQVVFSGVAKSEAEIRFALEKGIA 119 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ + Q A +L +AP++ RVNPD++A TH ISTG K +KFGI I+ + Sbjct: 120 CFNVESAAELERIEQVARALKTRAPVSLRVNPDVDAKTHPYISTGLKANKFGIAINDAMA 179 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++ A TL +++ G D HIGSQI F A K + L ++L+ + H+D+GGG Sbjct: 180 VFRRAHTLNHIELLGADCHIGSQIMSDAPFLDAAKRMFKLLERLQEEAIELSHLDLGGGF 239 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + +I + ++LEPGR +V D G+L++KV IK+S DK Sbjct: 240 GVDYEGHATLDLENYLQGVIDLAHDYPKLTLMLEPGRAIVGDAGVLISKVEYIKRSDDKQ 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV++D MND MRP+LY A+H+I + G I D+VGP+CETG F+ R + Sbjct: 300 FVLVDAGMNDLMRPSLYQAWHDIVPVRELTGVADGI-VDVVGPVCETGCFLGHARHLN-V 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 DL+ I+ GAYG + YN+R+ E++V + +IR R TF +LI + + Sbjct: 358 NADDLIAIKHAGAYGFTMASNYNTRVRPAEVLVENDRAWLIRERETFDDLIRGERL 413 >gi|188996497|ref|YP_001930748.1| diaminopimelate decarboxylase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931564|gb|ACD66194.1| diaminopimelate decarboxylase [Sulfurihydrogenibium sp. YO3AOP1] Length = 419 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 183/413 (44%), Positives = 247/413 (59%), Gaps = 3/413 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + F Y E L+ E VS+ LA V TPF+ YS AI + AF DT++CYALKA Sbjct: 6 NYFGYIEKKLYCEEVSILNLASKVGTPFFVYSKKAILDKINQYKEAFKDYDTLICYALKA 65 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN +++K G G DIVS GEL +A A + +IV++GVGKT EI A+ I Sbjct: 66 NSNLSLLKIFEENGVGADIVSGGELYKAKKAGFSSNKIVYAGVGKTDFEISYAISENILS 125 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVES EL +N+ A KKA ++ RVNP+++ TH ISTG K+ KFGI I Q Sbjct: 126 FNVESFMELDVINEIAGKQEKKANVSIRVNPNVDPKTHPYISTGLKKSKFGIDIDQALDA 185 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A+ L + + GV HIGSQI I F +A + + DL +L+ G ++ ID+GGGLG Sbjct: 186 YKKAAKLENLNVVGVHCHIGSQIMDISVFREAAEKVVDLVFKLKKEGIELKFIDMGGGLG 245 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + YH D PP+ D A I K+I+EPGR L+A+ G L+TKVI +K +K F Sbjct: 246 VKYHPDDNPPTPKDLADAIIPVVKQTGLKLIIEPGRSLIAEAGALITKVIFLKDKQEKHF 305 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 VI+D MND +RP +Y+AYH ++N + ADIVGPICETGDF+AL+RKI Sbjct: 306 VIVDSGMNDLVRPAMYNAYHH---VLNVQEKDEEMIADIVGPICETGDFLALDRKIGKVE 362 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GDLL I GAYG+ S YN R E++V+GS F +I+ R ++ + + + Sbjct: 363 RGDLLAIMTAGAYGSSMSSNYNVRPRALEVLVDGSNFKVIKEREDYKHISKYE 415 >gi|319761552|ref|YP_004125489.1| diaminopimelate decarboxylase [Alicycliphilus denitrificans BC] gi|330823421|ref|YP_004386724.1| diaminopimelate decarboxylase [Alicycliphilus denitrificans K601] gi|317116113|gb|ADU98601.1| diaminopimelate decarboxylase [Alicycliphilus denitrificans BC] gi|329308793|gb|AEB83208.1| diaminopimelate decarboxylase [Alicycliphilus denitrificans K601] Length = 429 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 165/416 (39%), Positives = 246/416 (59%), Gaps = 4/416 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 Y + +L+ E+ L LA TP Y YS ++ + + F G +CYA+KAN Sbjct: 11 QLHYRDQALYLEDRRLSDLAREHGTPLYVYSQASMLQALAAYQRGFAGRRVQICYAMKAN 70 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ AV++ A G G DIVS GEL R +AA +++FSGVGKT E+ AL++GI CF Sbjct: 71 SSLAVLQLFAQHGCGFDIVSGGELERVMAAGGDPAKVIFSGVGKTRAEMRQALEAGIGCF 130 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL+ L++ A S+G +API+ RVNP+++A TH ISTG K +KFGI + Y Sbjct: 131 NVESEAELEVLSEVAQSMGLRAPISIRVNPNVDAKTHPYISTGLKGNKFGIAHERTLDTY 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LPG+++ G+D HIGSQI + + A L DL Q + + G I HID GGGLGI Sbjct: 191 RRAAQLPGLRVVGIDCHIGSQITEETPYLDAMDRLLDLVQAIEAAGIAIHHIDFGGGLGI 250 Query: 243 AYHSDHRPPSSSDYASLIH--QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y+ D P + + ++SL+ G +++EPGR LV + G+ +T+V+ +K K Sbjct: 251 DYNGDTPPAADALWSSLLAKLDARGYGDRLLMIEPGRSLVGNAGVCLTQVLYLKPGEQKN 310 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D AMND RP +Y + ++ A D+VGPICE+GD++ +R +A Sbjct: 311 FCVVDAAMNDLPRPAMYQ-AYHAIVPLDAAAKAPEQVYDVVGPICESGDWLGKDRSLA-V 368 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD+L + TGAY + TYN+R E++V+G+Q H+IR R ++ + + Sbjct: 369 AAGDMLAVLSTGAYCSSMGSTYNTRARPAEVLVDGAQAHLIRAREGISDIFRCERL 424 >gi|170695718|ref|ZP_02886860.1| diaminopimelate decarboxylase [Burkholderia graminis C4D1M] gi|170139323|gb|EDT07509.1| diaminopimelate decarboxylase [Burkholderia graminis C4D1M] Length = 420 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 182/416 (43%), Positives = 245/416 (58%), Gaps = 5/416 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G LHAE VS LA TP Y YS A+ + ++ A G V A+KAN Sbjct: 5 AFDYVDGVLHAEGVSAVSLAEQFGTPLYVYSRAALTAAWNAYAGACAGRRASVHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+ A LG+G DIVS GEL R LAA AE VFSGVGK +E+ AL +G+ CF Sbjct: 65 SNLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKHANEMREALAAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LNQ A +GKKAP++ RVNPD++A TH ISTG K +KFG+ + Y Sbjct: 125 NVESIPELDRLNQVAAQMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ + +++ G+D HIGSQI +I + A + +L +Q+ +G I+HIDVGGGLGI Sbjct: 185 QAAAAMTNLEVVGIDCHIGSQITEIAPYLDAVDKVLELVEQIEQDGVTIRHIDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + + G+ ++ EPGR LV + G+L+T+V +K A+K Sbjct: 245 TYDDETPPDIGEFVRTVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +YDAY D DIVGP+CE+GD++ R ++ Sbjct: 305 FAIVDAAMNDLARPAMYDAY--HAIDAAVKRDVPAHVYDIVGPVCESGDWLGRERLLS-V 361 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL I GAYG V S YN+R E+MV+G+Q H++R R Q+L ++I Sbjct: 362 EPGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGTQAHVVRAREEVQQLFAGEAI 417 >gi|254419909|ref|ZP_05033633.1| diaminopimelate decarboxylase [Brevundimonas sp. BAL3] gi|196186086|gb|EDX81062.1| diaminopimelate decarboxylase [Brevundimonas sp. BAL3] Length = 424 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 183/426 (42%), Positives = 263/426 (61%), Gaps = 8/426 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-----TMV 55 M F +G+L+AE V LE +A V TP Y YST ++++Y A D ++ Sbjct: 1 MHHFDLKDGALYAEGVPLEIIADEVGTPVYVYSTATLKRHYGLLRAAADAHREALGEALI 60 Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 +A+KANSN +V+ TLA LGSG D VSEGE+RRALAA +PA+RI+FSGVGKT E+ A+ Sbjct: 61 AFAVKANSNLSVLATLAKLGSGADTVSEGEIRRALAAGIPADRIIFSGVGKTDVEMVFAI 120 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 G+ N+ES +EL L A + +A RVNP++ A H KI+TG K DKFG+P+ Sbjct: 121 GVGVRQINIESGAELDRLIAVAALMQASPAVAVRVNPNVGAGGHAKITTGGKGDKFGVPV 180 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 + +LYA AS P V G+ HIGSQI+ + AF +L +T+ LR+ GH + +D Sbjct: 181 EEAMALYARASASPYVTPVGLACHIGSQINDLAPLEAAFTVLAQMTRDLRAQGHAVTRLD 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-ISIK 294 +GGGLG+ Y PPS +DY ++ + L + EPGR L A+ G+L+++V + Sbjct: 241 LGGGLGVPYSGGVEPPSPADYVAMAARVLSGLDVEAAFEPGRLLAANAGVLLSQVIQVNE 300 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +S + F++LD AMND MRP LYDA+H+I + G L D+VGP+CETGD A + Sbjct: 301 RSDGRRFLVLDAAMNDLMRPALYDAFHDIKPVNPRPGAALSH--DVVGPVCETGDTFARD 358 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R + DL+ GAYGAV + YNSR L+PE++V+G Q+ +IRPR T++++++ + Sbjct: 359 RSLPPLEAEDLVVFTGAGAYGAVMASEYNSRPLVPEVLVDGDQWAVIRPRPTYEDMLDRE 418 Query: 415 SIPAWL 420 WL Sbjct: 419 PFADWL 424 >gi|303256483|ref|ZP_07342497.1| diaminopimelate decarboxylase [Burkholderiales bacterium 1_1_47] gi|302859974|gb|EFL83051.1| diaminopimelate decarboxylase [Burkholderiales bacterium 1_1_47] Length = 437 Score = 294 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 171/416 (41%), Positives = 243/416 (58%), Gaps = 4/416 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F + +G+L ENV L+ LA TP Y YS AI + ++ + ++C+A+KAN Sbjct: 10 EFAWKDGTLWCENVPLKDLAARFGTPLYVYSKQAIVNAFQSYQKPLEPYKHLMCFAVKAN 69 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN ++I+ L LG+G DIVSEGELRR AA +++FSGV KT EI+ AL + I CF Sbjct: 70 SNLSIIRLLGKLGAGFDIVSEGELRRIQAAGCDTSKVIFSGVAKTYHEIEAALDADIKCF 129 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 N+ES +EL + A GKKA ++FRVNPD++A TH ISTG K++KFGI Q LY Sbjct: 130 NIESPAELDRVIAVAQKKGKKARVSFRVNPDVDAKTHPYISTGLKKNKFGIAYDQAVELY 189 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 AS P +++ G+D HIGSQI F A + L L +LR NG ++QHID GGGLGI Sbjct: 190 LKASRSPELEVVGIDCHIGSQITDTAPFVDACEKLCTLLDKLRLNGIDLQHIDFGGGLGI 249 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y ++ P + A+L ++I E GR LV + G L+ V +K+ K Sbjct: 250 QYSNEAVPSPTVLVAALRRALVKRGYGDKEMIFEAGRSLVGNSGALLMTVQYMKQGELKN 309 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RPTLY A+ V P + + +VGP+CETGD++ +R + Sbjct: 310 FCIVDCGMNDMIRPTLYQAWM-QIVPVTPKKEGKETYCYVVGPVCETGDWLGKDRLLN-V 367 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDL+ + GAYG + YNSR L E++V+G++ +IR R +EL + + Sbjct: 368 QEGDLMALLSAGAYGMSMASNYNSRCLPAEVLVDGNKAVLIRKRQRAEELFSDEIL 423 >gi|289641898|ref|ZP_06474054.1| diaminopimelate decarboxylase [Frankia symbiont of Datisca glomerata] gi|289508307|gb|EFD29250.1| diaminopimelate decarboxylase [Frankia symbiont of Datisca glomerata] Length = 445 Score = 294 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 138/431 (32%), Positives = 232/431 (53%), Gaps = 17/431 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G L+ E+V++E +A TP Y YS + + ++AF + ++C+++K Sbjct: 1 MDRFTYRDGVLYVEDVAVEDIAARFGTPVYVYSHGTLVTHLRQVADAFADLAPLICFSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SN +++ LA G+G+D+VS GEL RAL A VPA+RIVF+GVGK+ +E+ A++SGI Sbjct: 61 ALSNIHLLRGLAAAGAGVDVVSGGELYRALLAGVPAQRIVFAGVGKSDEELRYAVRSGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKA--PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 C NVESE E++ L + A A + + + + T K +TG++ KFGI + ++ Sbjct: 121 CVNVESEGEMRALARAAAECRMPAGAAVRVNPDVAVGSRTPAKTTTGRRGGKFGIDLDRV 180 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 H +Y A ++ G+ H+GS + ++ A + +T++L ++G + I++GG Sbjct: 181 HEVYRLAVDDEWLRPEGLHFHLGSPVFHPRAYGDAVDKVLTVTEKLTADGAPVPTINIGG 240 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQ---CKIILEPGRFLVADVGILVTKVISIKK 295 G Y P SD+A++I + +++EPGR + A+ G+L+ V +K Sbjct: 241 GFPADY-EGSGVPGWSDFAAVIAPKLRSFVAAGGTVVMEPGRSIAANAGVLLASVRYLKT 299 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG-----------DRLHIHADIVGPI 344 S + VI D M+ +R YD +H + G D+ GP+ Sbjct: 300 SGSRNVVITDTGMSHLIRTAFYDTFHFLWPARPRNGLSPVGRTGEHDQPDLARYDVAGPL 359 Query: 345 CETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPR 404 CE+ D++A +R + RPGD+L I GAYG + YNS E++V+G +IR R Sbjct: 360 CESSDYLAKDRLLPSLRPGDVLAIFTAGAYGMTMASHYNSLPRPAEVLVDGGDVRLIRRR 419 Query: 405 MTFQELIELDS 415 T+++L+ + Sbjct: 420 ETYEDLVSAEV 430 >gi|167036981|ref|YP_001664559.1| diaminopimelate decarboxylase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039692|ref|YP_001662677.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X514] gi|256750624|ref|ZP_05491510.1| diaminopimelate decarboxylase [Thermoanaerobacter ethanolicus CCSD1] gi|300915059|ref|ZP_07132374.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X561] gi|307724982|ref|YP_003904733.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X513] gi|320115399|ref|YP_004185558.1| diaminopimelate decarboxylase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166853932|gb|ABY92341.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X514] gi|166855815|gb|ABY94223.1| diaminopimelate decarboxylase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256750464|gb|EEU63482.1| diaminopimelate decarboxylase [Thermoanaerobacter ethanolicus CCSD1] gi|300888783|gb|EFK83930.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X561] gi|307582043|gb|ADN55442.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X513] gi|319928490|gb|ADV79175.1| diaminopimelate decarboxylase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 445 Score = 294 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 133/434 (30%), Positives = 202/434 (46%), Gaps = 14/434 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQ 65 +G L LA TP Y + +N F N F V YA KA Sbjct: 11 KGHLEIGGCDTVTLAKKFGTPLYVIDEELLRQNCRAFYNGFKKDYPGNEVIYASKAFMTM 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ K + GLD+VS GEL AL A PAE+I F G K+ +E+ +AL++ I V+ Sbjct: 71 AICKIIEEENLGLDVVSGGELYTALKAGFPAEKIYFHGNNKSKEELIMALENNIGRIIVD 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL LN A + K I RV+P + A+TH+ + TG+ + KFG P+ ++ A Sbjct: 131 NWYELNMLNDLAKKMNKVPNIYIRVSPGVEAHTHQYVKTGQMDSKFGFPLFNGDAMRAIE 190 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGI 242 YA TL V + G+ HIGSQI ES+ +++ + + ++ +D+GGG GI Sbjct: 191 YALTLENVNLVGLHSHIGSQIFDAESYKAEIEIMMNFLKLVKEFLGWEVGELDLGGGFGI 250 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKK 295 AY + P A I Q II+EPGR ++ + G + V +IK Sbjct: 251 AYVEEDDPQPIEQIAQEIMQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKD 310 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LY A ++ N A + I G +CE+GD + + Sbjct: 311 IPGVRKYVAVDGGMSDNIRTALYGAKYDAIV-ANKAKNIKSEKVSIAGKLCESGDMLIWD 369 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD+L + TGAY + YN ++V+ Q II R T+++LI D Sbjct: 370 ITLPKIEEGDILAVTCTGAYNYSMASNYNRLPRPAAVLVSNGQADIIVARETYEDLIRND 429 Query: 415 SIPAWLQKTPKQSS 428 IP L ++ + Sbjct: 430 IIPERLTNEKRKIA 443 >gi|307266020|ref|ZP_07547567.1| diaminopimelate decarboxylase [Thermoanaerobacter wiegelii Rt8.B1] gi|306918982|gb|EFN49209.1| diaminopimelate decarboxylase [Thermoanaerobacter wiegelii Rt8.B1] Length = 445 Score = 294 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 134/434 (30%), Positives = 202/434 (46%), Gaps = 14/434 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQ 65 +G L LA TP Y + +N F N F V YA KA Sbjct: 11 KGHLEIGGCDTVTLAKKFGTPLYVIDEELLRQNCRAFYNGFKKDYPGNEVIYASKAFMTM 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ K + GLD+VS GEL AL A PAE+I F G K+ +E+ +AL++ I V+ Sbjct: 71 AICKIIEEENLGLDVVSGGELYTALKAGFPAEKIYFHGNNKSKEELIMALENNIGRIIVD 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL LN A + K I RV+P + A+TH+ + TG+ + KFG P+ ++ A Sbjct: 131 NWFELNMLNDLAKKMNKVPNIYIRVSPGVEAHTHQYVKTGQIDSKFGFPLFNGDAMRAIE 190 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGI 242 YA TL V I G+ HIGSQI ES+ +++ + + ++ +D+GGG GI Sbjct: 191 YALTLENVNIVGLHSHIGSQIFDAESYKAEIEIMMNFLKLVKEFLGWEVGELDLGGGFGI 250 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKK 295 AY + P A I Q II+EPGR ++ + G + V +IK Sbjct: 251 AYVEEDDPQPIEQIAQEIMQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKD 310 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LY A ++ N A + I G +CE+GD + + Sbjct: 311 IPGVRKYVAVDGGMSDNIRTALYGAKYDAIV-ANKAKNIKSEKVSIAGKLCESGDMLIWD 369 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD+L + TGAY + YN ++V+ Q II R T+++LI D Sbjct: 370 ITLPKIEEGDILAVTCTGAYNYSMASNYNRLPRPAAVLVSNGQADIIVARETYEDLIRND 429 Query: 415 SIPAWLQKTPKQSS 428 IP L ++ + Sbjct: 430 IIPERLTNEKRKIA 443 >gi|187925578|ref|YP_001897220.1| diaminopimelate decarboxylase [Burkholderia phytofirmans PsJN] gi|187716772|gb|ACD17996.1| diaminopimelate decarboxylase [Burkholderia phytofirmans PsJN] Length = 420 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 181/417 (43%), Positives = 251/417 (60%), Gaps = 5/417 (1%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 SAF Y +G LHAE VS LA TP Y YS A+ + + ++ A G V A+KA Sbjct: 4 SAFDYVDGVLHAEGVSAVSLAEQFGTPLYVYSRAALTEAWNAYAGACAGRRASVHVAVKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN AV+ A LG+G DIVS GEL R LAA AE VFSGVGK DE+ AL +G+ C Sbjct: 64 NSNLAVLNVFARLGAGFDIVSGGELARVLAAGGRAENTVFSGVGKHADEMRDALAAGVKC 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVES EL LN A ++GKKAP++ RVNPD++A TH ISTG K +KFG+ + Sbjct: 124 FNVESIPELDRLNAVAAAMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARAT 183 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A+ + +++ G+D HIGSQI ++ + A + +L +Q+ +G I+HIDVGGGLG Sbjct: 184 YQAAAAMANLEVVGIDCHIGSQITEVAPYLDAVDKVLELVEQIEQDGVKIRHIDVGGGLG 243 Query: 242 IAYHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 I Y + P + + G+ ++ EPGR LV + G+L+T+V +K A+K Sbjct: 244 ITYDDETPPEIGEFVRTVLDRIEARGHGHREVYFEPGRSLVGNAGMLLTRVEFLKPGAEK 303 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AM D RP +Y+AYH I+ +V D D+VGP+CE+GD++ R ++ Sbjct: 304 NFAIVDAAMTDLARPAMYEAYHAIDPVVKR--DVPAHVYDVVGPVCESGDWLGRERLLS- 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL I GAYG V S YN+R E+MV+G+Q H++R R ++L ++I Sbjct: 361 VEPGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGTQVHVVRAREEVKQLFAGETI 417 >gi|320106738|ref|YP_004182328.1| diaminopimelate decarboxylase [Terriglobus saanensis SP1PR4] gi|319925259|gb|ADV82334.1| diaminopimelate decarboxylase [Terriglobus saanensis SP1PR4] Length = 437 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 184/420 (43%), Positives = 249/420 (59%), Gaps = 9/420 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F Y G L + VSL+KLA TP Y YS + + F+ F + VCYA+KANS Sbjct: 20 FVYAGGELVCDGVSLQKLAKKFGTPLYVYSAAQMVERAGMFAREFADVQHTVCYAVKANS 79 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAE-----RIVFSGVGKTIDEIDLALQSG 118 V+K LA G G DIVS GEL R + A R+VFSGVGK EIDLAL+ G Sbjct: 80 ALGVLKLLAAQGCGFDIVSGGELERVIRAAGDKRAEVCGRVVFSGVGKQPAEIDLALREG 139 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I FNVESE EL+ + +RA L KA IA RVNPD+ A TH ISTG +E KFGI I Sbjct: 140 ILLFNVESEGELELVAERAAKLKIKARIALRVNPDVFAETHPYISTGLREHKFGIDIRLA 199 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 +Y A+ L ++ +GV +HIGSQI +E F A + L +QLR++GH+I++ D GG Sbjct: 200 RKVYKRAAQLKWLEPAGVSVHIGSQIRSVEPFAAALSRVVALIKQLRADGHDIRYADAGG 259 Query: 239 GLGIAYHSDHRPPSSS--DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 GLGI Y + + P+ YA + G + ++LEPGRF+VA G LV++V+ +KK+ Sbjct: 260 GLGIDYGAGNFEPAKQVAKYAKALKGALGTMDLHLLLEPGRFIVAQAGALVSQVLFVKKN 319 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 KTFVI D AMND +RP LY A+HEI + R D+VGP+CE+GDF A +R+ Sbjct: 320 GTKTFVIADAAMNDLIRPALYQAHHEIVPLKQT--SRKLRKVDVVGPVCESGDFFARDRE 377 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +A + GD + + GAYG S YN+R+ E+++ + +IR R T ++L + I Sbjct: 378 MAPLKRGDGIALLDAGAYGLSLSSNYNTRVRPAEVLIERGKARLIRRRETVEDLFGPEMI 437 >gi|326389774|ref|ZP_08211339.1| diaminopimelate decarboxylase [Thermoanaerobacter ethanolicus JW 200] gi|325994256|gb|EGD52683.1| diaminopimelate decarboxylase [Thermoanaerobacter ethanolicus JW 200] Length = 445 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 134/434 (30%), Positives = 202/434 (46%), Gaps = 14/434 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQ 65 +G L LA TP Y + +N F N F V YA KA Sbjct: 11 KGHLEIGGCDTVTLAKKFGTPLYVIDEELLRQNCRVFYNGFKKDYPGNEVIYASKAFMTM 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ K + GLD+VS GEL AL A PAE+I F G K+ +E+ +AL++ I V+ Sbjct: 71 AICKIIEEENLGLDVVSGGELYTALKAGFPAEKIYFHGNNKSKEELIMALENNIGRIIVD 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL LN A + K I RV+P + A+TH+ + TG+ + KFG P+ ++ A Sbjct: 131 NWFELNMLNDLAKKMNKVPNIYIRVSPGVEAHTHQYVKTGQIDSKFGFPLFNGDAMRAIE 190 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGI 242 YA TL V I G+ HIGSQI ES+ +++ + + ++ +D+GGG GI Sbjct: 191 YALTLENVNIVGLHSHIGSQIFDAESYKAEIEIMMNFLKLVKEFLGWEVGELDLGGGFGI 250 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKK 295 AY + P A I Q II+EPGR ++ + G + V +IK Sbjct: 251 AYVEEDDPQPIEQIAQEIMQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKD 310 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LY A ++ N A + I G +CE+GD + + Sbjct: 311 IPGVRKYVAVDGGMSDNIRTALYGAKYDAIV-ANKAKNIKSEKVSIAGKLCESGDMLIWD 369 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD+L + TGAY + YN ++V+ Q II R T+++LI D Sbjct: 370 ITLPKIEEGDILAVLCTGAYNYSMASNYNRLPRPAAVLVSNGQADIIVARETYEDLIRND 429 Query: 415 SIPAWLQKTPKQSS 428 IP L ++ + Sbjct: 430 IIPERLTNEKRKIA 443 >gi|323527565|ref|YP_004229718.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1001] gi|323384567|gb|ADX56658.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1001] Length = 420 Score = 293 bits (750), Expect = 4e-77, Method: Composition-based stats. Identities = 178/416 (42%), Positives = 242/416 (58%), Gaps = 5/416 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G LHAE VS LA TP Y YS A+ + ++ A G V A+KAN Sbjct: 5 AFDYVDGVLHAEGVSAVSLAEQFGTPLYVYSRAALTDAWNAYAGACAGRRASVHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+ A LG+G DIVS GEL R LAA AE VFSGVGK DE+ AL +G+ CF Sbjct: 65 SNLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKHADEMREALAAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A + +KAP++ RVNPD++A TH ISTG K +KFG+ + Y Sbjct: 125 NVESIPELDRLNAVAAQMDRKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ + +++ G+D HIGSQI ++ + A L +L +Q+ +G I+HIDVGGGLGI Sbjct: 185 QAAAAMANLEVVGIDCHIGSQITEVAPYLDAVDKLLELVEQIEQDGLTIRHIDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G+ ++ EPGR LV + G+L+T+V +K A+K Sbjct: 245 TYDDETPPDIGDFVSTVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y+AY + D+VGP+CE+GD++ R ++ Sbjct: 305 FAIVDAAMNDLARPAMYEAY--HVIDAAVQREVPAHVYDVVGPVCESGDWLGRERLLS-V 361 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL I GAYG V S YN+R E+MV+G+Q H++R R Q+L +SI Sbjct: 362 EPGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGTQAHVVRAREEVQQLFAGESI 417 >gi|56552664|ref|YP_163503.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis ZM4] gi|13124113|sp|Q9Z661|DCDA_ZYMMO RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|4378171|gb|AAD19416.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis ZM4] gi|56544238|gb|AAV90392.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis ZM4] Length = 421 Score = 293 bits (750), Expect = 4e-77, Method: Composition-based stats. Identities = 185/424 (43%), Positives = 258/424 (60%), Gaps = 7/424 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD---TMVCY 57 M F G+L E++ L ++A TP Y YS + + + F+ A DG ++V + Sbjct: 1 MIPFSLKNGTLCVEDIPLPEIAAQYGTPCYVYSHSYLTERARRFTKALDGAGKGKSLVAF 60 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+KAN +QA++ + A G G D+VS GE+RRA+ A +P ERIVFSGVGKT +E+ AL+ Sbjct: 61 AVKANPSQAILASFAKEGLGADVVSAGEIRRAVHAGIPPERIVFSGVGKTAEEMRYALEI 120 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 GI FN+ES SE++ L + A SLGKKA +A R+NPD++ +TH KI+TGK + KFGI Sbjct: 121 GIGQFNIESVSEIEMLAEVATSLGKKAAVALRINPDVDPHTHAKIATGKADTKFGIAAED 180 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 S Y ++ P +KI G+ HIGSQI + F A + + ++ L GH I+ D+G Sbjct: 181 ALSAYEKLASYPSLKIQGIASHIGSQITDLAPFEAAAERIYEIITALEKAGHAIETADLG 240 Query: 238 GGLG-IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 GGLG PPS Y +I + C++I EPGR L+A+ G+L++KVI IK+S Sbjct: 241 GGLGVRYKDDQPEPPSVEAYGEMIKRVTKGWNCRLIFEPGRSLIANAGVLLSKVIRIKES 300 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 FVILD AMND +RPTLYDAYHEI ADIVGP+CETGD A NR Sbjct: 301 KTARFVILDAAMNDLVRPTLYDAYHEI---KAVTPSAQTYQADIVGPVCETGDIFARNRS 357 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 I+ + DL+ I GAYGA + YNSR L+ E+MV+G++ +IR R + ++L+ + Sbjct: 358 ISAVKADDLMAIMSAGAYGATMASAYNSRPLVAEVMVSGNKSALIRKRQSVEDLMRDEQK 417 Query: 417 PAWL 420 WL Sbjct: 418 VEWL 421 >gi|120609686|ref|YP_969364.1| diaminopimelate decarboxylase [Acidovorax citrulli AAC00-1] gi|120588150|gb|ABM31590.1| diaminopimelate decarboxylase [Acidovorax citrulli AAC00-1] Length = 427 Score = 293 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 169/418 (40%), Positives = 245/418 (58%), Gaps = 3/418 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 Y L E+V LA TP Y YS ++ + F G +CYA+KAN Sbjct: 11 HIAYRGDDLFIESVRAADLAQEHGTPLYVYSKASMLSALEAYQRGFAGRKVQICYAMKAN 70 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ V++ A G G DIVS GELRR LAA A +++FSGVGKT E+ AL++GI CF Sbjct: 71 SSLGVLQLFARAGCGFDIVSAGELRRVLAAGGEAAKVIFSGVGKTRQEMREALEAGIGCF 130 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE EL+ LN+ A++ G++AP++ RVNP+++ TH ISTG K +KFG+ + + Y Sbjct: 131 NVESEPELEVLNEVAMACGRRAPVSIRVNPNVDPKTHPYISTGLKGNKFGVAHERTVATY 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LPG+++ G+D HIGSQI + + A + DL Q+ S G I HID GGGLGI Sbjct: 191 QRAAALPGLQVVGIDCHIGSQITEATPYLDAVDRMLDLVAQIESAGIPIHHIDFGGGLGI 250 Query: 243 AYHSDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y+ D P + + + L+ + G + ++EPGR LV + G+ +T+V+ +K K Sbjct: 251 DYNGDTPPAADALWKQLLARLDARGYGDRQFMIEPGRSLVGNAGVCLTEVLYVKPGEQKN 310 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y A+H I + PA D D+VGP+CE+GD+I +R +A Sbjct: 311 FCIVDAAMNDLPRPAMYQAFHGIVPVAAPARDAATAVYDVVGPVCESGDWIGRDRTLA-V 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 R GD L + GAY + TYN+R E++V+G+ H+IR R ++ + +P Sbjct: 370 RAGDRLAVLSAGAYCSSMGSTYNTRARPAEVLVDGTHAHLIRTREPLEDTFRHEKLPG 427 >gi|255321868|ref|ZP_05363018.1| diaminopimelate decarboxylase [Campylobacter showae RM3277] gi|255300972|gb|EET80239.1| diaminopimelate decarboxylase [Campylobacter showae RM3277] Length = 413 Score = 293 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 163/410 (39%), Positives = 235/410 (57%), Gaps = 11/410 (2%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + LA TP Y Y I Y NAF ++VCYA+KANSN +V+K LA LG Sbjct: 1 MDFTNLAQKYGTPLYVYDFDYIAHRYEALKNAFHARKSLVCYAVKANSNLSVLKFLAGLG 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G D VS GE++RAL A +I+ SGVGK DE+ AL++ I N+ESE+E+ L Sbjct: 61 AGFDCVSVGEVKRALLAGAKNYQIILSGVGKRDDELKFALENEILMINLESEAEMNRLEA 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A LGK A I+ RVNPDI+A TH ISTG E+KFG+ + +Y +A P ++ G Sbjct: 121 IAKQLGKSARISIRVNPDIDAKTHPYISTGLNENKFGVDLQTAKKMYLHAKNSPHLEPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIGSQI I+ +A K++ +LT++L++ +I+ DVGGG+GI Y + P + Sbjct: 181 IHSHIGSQITDIKPVIEAAKIVANLTRELKATQIDIKFFDVGGGIGIVYGEESE-PDLYE 239 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L ++ EPGRF+V + G +T V+ K + +K FVI+D AMND +RP+ Sbjct: 240 YAQGILANLSGLDVTVVCEPGRFIVGNAGYFLTSVLYEKFNKEKRFVIVDGAMNDLIRPS 299 Query: 316 LYDAYHE----------INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 LY A H+ + D+VGPICE+GDF+A +R + PGDL Sbjct: 300 LYQAKHKIFALSSGKTLCECKKEQLWELKFSPCDVVGPICESGDFLAKDRNLPPLNPGDL 359 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + I+ GAYG S YN+R E+ V G + ++R R +F++++ L+ Sbjct: 360 VVIKSAGAYGFAMSSNYNTRGRAAEVAVKGGEDFLVRRRESFEDVVALER 409 >gi|255065336|ref|ZP_05317191.1| diaminopimelate decarboxylase [Neisseria sicca ATCC 29256] gi|255050161|gb|EET45625.1| diaminopimelate decarboxylase [Neisseria sicca ATCC 29256] Length = 406 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 173/404 (42%), Positives = 245/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 LH E V +LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LHCEQVPYSRLAEEFGTPLYVYSQSALTEAFENYQTAFAALSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALHAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y +A+ Sbjct: 123 DRIQKVAERLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAARQSH 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L +L G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDRLADEGIVLEHLDLGGGVGIVYQDE-TI 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+ +V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLARVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + + + A+IVGPICETGDF+ +R +A GDLL I Sbjct: 302 LMRPALYDAYHRIEAVE--PKNIPPLTANIVGPICETGDFLGKDRTLA-CEEGDLLVIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+GS++ +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNTRNRAAEVLVDGSEYRLIRRRETLEQQMANE 402 >gi|311068934|ref|YP_003973857.1| diaminopimelate decarboxylase [Bacillus atrophaeus 1942] gi|310869451|gb|ADP32926.1| diaminopimelate decarboxylase [Bacillus atrophaeus 1942] Length = 439 Score = 292 bits (748), Expect = 6e-77, Method: Composition-based stats. Identities = 126/422 (29%), Positives = 200/422 (47%), Gaps = 15/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V LA TP Y Y I + +F AF G+ V YA KA S+ A Sbjct: 13 GHLEIGGVDALYLAENYGTPLYVYDVALIRERAKSFQQAFTAAGLRAQVAYASKAFSSVA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I+ G LD+VS GEL A++A PAERI F G K+ +E+ +AL+ I C V++ Sbjct: 73 MIQLAQEEGLSLDVVSGGELYTAISAGFPAERIHFHGNNKSREELQMALEYHIGCIVVDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ + + G + R+ P + A+TH I+TG+++ KFG ++ + A Sbjct: 133 FYEISLIEELCKESGYTVDVLLRITPGVEAHTHDYITTGQEDSKFGFDLNNGQTERAIEQ 192 Query: 187 TLP--GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIA 243 LP +++ GV HIGSQI F A + + + R + +++GGG GI Sbjct: 193 ILPSNHIRLLGVHCHIGSQIFDTAGFVLAAEKIFTKLDEWRESYSFISKVLNLGGGFGIR 252 Query: 244 YHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P ++ Y + + +I +EPGR LV D G + V + K+ Sbjct: 253 YTEEDEPLPATVYVEKIIEAVKANAERYSFSIPEIWIEPGRSLVGDAGTTLYTVGAQKEV 312 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M+D +RP LY A +E N + + I G CE+GD + + Sbjct: 313 PGTRRYAAVDGGMSDNIRPALYQAKYEAIS-ANRIEEEHNTTVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GDLL + TGAYG + YN + V + H++ R T++++++LD Sbjct: 372 DLPEVKAGDLLAVFCTGAYGYSMANNYNRIPRPAVVFVEDGEAHLVIKRETYEDIVKLD- 430 Query: 416 IP 417 +P Sbjct: 431 LP 432 >gi|33594789|ref|NP_882432.1| diaminopimelate decarboxylase [Bordetella parapertussis 12822] gi|33599061|ref|NP_886621.1| diaminopimelate decarboxylase [Bordetella bronchiseptica RB50] gi|33564865|emb|CAE39809.1| diaminopimelate decarboxylase [Bordetella parapertussis] gi|33575107|emb|CAE30570.1| diaminopimelate decarboxylase [Bordetella bronchiseptica RB50] Length = 429 Score = 292 bits (748), Expect = 6e-77, Method: Composition-based stats. Identities = 183/418 (43%), Positives = 261/418 (62%), Gaps = 6/418 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F+Y G LHAE+V L+ LA + TP Y YS A+ + T+ +A +VC+ +KAN Sbjct: 15 HFRYQNGVLHAEDVPLDSLAAQLGTPLYVYSRAALRSAWETYRDAIGERPVLVCFGMKAN 74 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+K A LG+G DIVS GEL R LA ++VFSGVGK E+ AL++ + CF Sbjct: 75 SNLAVLKEFARLGAGFDIVSGGELARVLAVGGDPAKVVFSGVGKQAWEMRAALEADVKCF 134 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL+ L+ AVS+G++A ++ RVNPD++A TH ISTG KE+KFGI I + Y Sbjct: 135 NVESEAELERLSDVAVSMGRRARVSLRVNPDVDAQTHPYISTGLKENKFGIAIESAPAAY 194 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LPGV++ GVD HIGSQ+ I + A + L DL +QL NG I+H+D+GGGLGI Sbjct: 195 RLAARLPGVEVVGVDCHIGSQLTDISPYFDALEKLLDLIEQLAENGIAIKHLDLGGGLGI 254 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G I+LEPGR LV + G+L+T V +K + + Sbjct: 255 RYTDEIPPSPKALLDRVFERINARGLGHLHIVLEPGRSLVGNAGVLLTTVQYLKHAEARN 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+AYH + + A R I D+VGP+CE+ D++A R +A Sbjct: 315 FAIVDAAMNDLLRPALYEAYHGVQPVTPRADKR--IEYDVVGPVCESADWLARGRALA-I 371 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 + GD+L +E GAY V + YN+R+ E+MV+G++ +I+R R T + L + + ++P Sbjct: 372 QAGDVLAVESAGAYSMVMASNYNTRVRAAEVMVDGNRHYIVRQRETLESLYQGESTLP 429 >gi|297172094|gb|ADI23076.1| diaminopimelate decarboxylase [uncultured gamma proteobacterium HF0770_07M15] Length = 432 Score = 292 bits (748), Expect = 6e-77, Method: Composition-based stats. Identities = 179/432 (41%), Positives = 257/432 (59%), Gaps = 15/432 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y G LH E VS+ LA TP Y YS+ + ++ SNA +D ++C+A+K Sbjct: 1 MHDFRYVNGQLHCEGVSIASLAKQHGTPLYVYSSKTLTDHFTKLSNALAPLDHLICFAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN V++TLA LGSG D VS GE++RA+AA ++ VF+GVGKT DEI AL+ GIY Sbjct: 61 SNSNLGVLRTLADLGSGFDTVSGGEIQRAIAAGGNPKKCVFAGVGKTADEIAFALRKGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE+EL+ +N+ A L K APIA RVNP+++A THKKI+TG E+KFGI I +I + Sbjct: 121 CFNVESEAELERINRIAGKLKKIAPIAIRVNPNVDAKTHKKITTGTYENKFGIAIEKIPA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG------------ 228 LYA + L +++ GV MHIGSQ+ Q++ F A + + L +L++ Sbjct: 181 LYARGAKLKHIRLRGVQMHIGSQLTQVKPFADAVRKIAPLAAKLKAKHGIEFISIGGGLG 240 Query: 229 -HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 + G + + YA+ + L K++LEPGRF+ + GILV Sbjct: 241 IMYEDALVSGNADWWKRKEAKNILTPAKYAATLVPLLQPLGLKVLLEPGRFISGNAGILV 300 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 T+V +K++ K F I+D AMND +RP Y++YHEI + ++ D+VG ICET Sbjct: 301 TRVEYVKRTGKKYFAIVDAAMNDLLRPAFYESYHEIVPVKQ--SKARPVNTDVVGGICET 358 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 GD +R I GDL+ I GAYG V +GTYN+R L E++V G + I+R R Sbjct: 359 GDTFCKDRPIPRVAEGDLVAILSAGAYGFVMAGTYNTRPLPAEVLVKGKKSAIVRKRQKV 418 Query: 408 QELIELDSIPAW 419 +E+ E +++ W Sbjct: 419 KEIWEDETVAPW 430 >gi|89901687|ref|YP_524158.1| diaminopimelate decarboxylase [Rhodoferax ferrireducens T118] gi|89346424|gb|ABD70627.1| diaminopimelate decarboxylase [Rhodoferax ferrireducens T118] Length = 433 Score = 292 bits (747), Expect = 7e-77, Method: Composition-based stats. Identities = 168/416 (40%), Positives = 246/416 (59%), Gaps = 5/416 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y L E + L L TP + YS +A+ + F G + +CYA+KAN Sbjct: 11 HFAYRGNELFCEEIRLSDLVRAHGTPLFVYSKSAMLAALAAYQRGFAGRNVQICYAMKAN 70 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 VI+ A G G DIVS G++ R LAA AE+I+FSGVGKT E+ AL++GI CF Sbjct: 71 PALGVIQVFAEAGCGFDIVSGGDMDRVLAAGGRAEKIIFSGVGKTRAEMRRALRAGIGCF 130 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL+ L++ A+S+G AP++ RVNP+++ TH ISTG K+ KFG+ ++ Y Sbjct: 131 NVESEAELEVLSEVALSMGVAAPVSIRVNPNVDPKTHPYISTGLKDSKFGVAHERVLPTY 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A L GV++ G+D HIGSQI Q + A + DL + + + G + HID GGGLGI Sbjct: 191 QRAVKLAGVRVVGIDCHIGSQITQEGPYLDAVDRMLDLVEAIEAAGIPLHHIDFGGGLGI 250 Query: 243 AYHSDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 YH + P + + L+ + G Q +++EPGR LV + G+ +++V+ +K K Sbjct: 251 DYHGETPPDAGLLWQKLLARLDARGFGQRHLMIEPGRSLVGNAGVCLSEVLYLKPGEQKN 310 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y A+H+I + G D+VGPICE+GD+I +R +A Sbjct: 311 FCIIDAAMNDLPRPAMYQAFHQIVPLNRRPGAPD--TYDVVGPICESGDWIGHDRSLA-V 367 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +PGDLL + GAY + YNSR EI+V+G+Q ++IR R T + ++ +S+ Sbjct: 368 QPGDLLAVLSAGAYCMSMASNYNSRGRAAEILVDGAQAYVIRQRETIADQMQGESL 423 >gi|327401963|ref|YP_004342802.1| diaminopimelate decarboxylase [Archaeoglobus veneficus SNP6] gi|327317471|gb|AEA48087.1| diaminopimelate decarboxylase [Archaeoglobus veneficus SNP6] Length = 427 Score = 292 bits (747), Expect = 7e-77, Method: Composition-based stats. Identities = 158/425 (37%), Positives = 242/425 (56%), Gaps = 10/425 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F+ +G LH E VS+ L + +P Y S +E+N + AF D + YA+KAN+ Sbjct: 8 FRSVDGVLHVEGVSVLDLVKELGSPLYVTSRGRLEENMKAYMQAFP--DARLLYAVKANN 65 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N +++K ++ G G D+ S+GEL AL A E+I+F+G K+ +EI + +++G Y F+ Sbjct: 66 NLSIMKIISRAGFGADVFSDGELYLALLAGFKPEKILFNGNSKSEEEIRMGVRAGTY-FS 124 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 V+S EL L++ AV G++ IAFR+NPDI+ TH KISTG + KFGIP ++ + Y Sbjct: 125 VDSIDELHVLSEVAVEEGEEVKIAFRINPDISPETHPKISTGLRTSKFGIPWEEVANAYR 184 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A +PG+ +G+ HIGSQI I F +A L D+ + L G +++ +D+GGGLGI Sbjct: 185 LAVEMPGIVPAGIHCHIGSQILDISPFVEALNRLFDVAEVLEDMGIDVEFLDLGGGLGID 244 Query: 244 YHSDHRPPSSSDYA-----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 Y P + A + N ++ LEPGR ++ + IL+TKV ++K A Sbjct: 245 YEGKGSPTPADFAAKILPVFEERKERLNSNPELWLEPGRSIIGNTTILLTKVNAVK-KAY 303 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K FV +D N MRP +Y+AYH + + + IVGPICE+GD +A +RK+ Sbjct: 304 KNFVAVDAGFNLLMRPAMYNAYHRVAIANKMDREEEEV-YTIVGPICESGDVLAEDRKLP 362 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 GD++ I GAYG S YN R E++V G+++++IR R ++ +L+ IP Sbjct: 363 RVERGDIIAIFDAGAYGFSMSSQYNGRRRCAEVLVEGNKYYVIRERESYTDLVGKQVIPE 422 Query: 419 WLQKT 423 L K Sbjct: 423 HLLKE 427 >gi|297171019|gb|ADI22033.1| diaminopimelate decarboxylase [uncultured myxobacterium HF0200_05J13] Length = 420 Score = 292 bits (747), Expect = 7e-77, Method: Composition-based stats. Identities = 163/425 (38%), Positives = 240/425 (56%), Gaps = 6/425 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+ LH E+V LE +A TP Y YS I ++ A + ++CYA+K Sbjct: 1 MDHFQRRSQILHCEDVPLEAIATEFGTPTYVYSKATISRHVRVLQEALKDLPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N A++ L LG G D VS GEL R + + SGVGK DEID AL + + Sbjct: 61 ANANLAILDLLQQLGCGFDAVSVGELARVSHIGASPAKTIVSGVGKRDDEIDAALSADVL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 ES EL+ + A +A ++ RVNPD++A TH I+TG ++KFG+PI + Sbjct: 121 YICAESREELEAIGDIAAKRNTRARVSIRVNPDVDAKTHPYIATGMNKNKFGVPIERAIE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY + T+P +++ GV HIGSQ+ ++ F A + + +LT+ LR+ G +Q I +GGGL Sbjct: 181 LYQHGLTIPSIELVGVTCHIGSQVTELSPFIDAAERMVELTRNLRALGAPLQFIGMGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y PPS +DY + + G L +ILEPGR +V + GIL+++V+ K+ A++ Sbjct: 241 GIPY-GSETPPSPADYGQALSKLLGALGLTVILEPGRVIVGNAGILLSRVVRTKEGAERR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D MND +RP LY A+H+I + P+ +R I D+VGP+CE+ D A + Sbjct: 300 FALIDAGMNDLIRPALYQAHHQIEAVAAPSDEREII--DVVGPVCESADTFAEQAEFTKL 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 PGDL+ I GAYG V + YN R E++ GS +IR R T + L + A L Sbjct: 358 EPGDLIAIRSAGAYGFVMACNYNGRPRPAEVLCTGSTKQLIRARETLEHLWHGE---ARL 414 Query: 421 QKTPK 425 + TP+ Sbjct: 415 ESTPE 419 >gi|261365975|ref|ZP_05978858.1| diaminopimelate decarboxylase [Neisseria mucosa ATCC 25996] gi|288565436|gb|EFC86996.1| diaminopimelate decarboxylase [Neisseria mucosa ATCC 25996] Length = 406 Score = 292 bits (747), Expect = 7e-77, Method: Composition-based stats. Identities = 176/404 (43%), Positives = 246/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 LH E V +LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LHCEQVPYSRLAEEFGTPLYVYSQSALTEAFENYQTAFAALSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALHAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y +A+ Sbjct: 123 DRIQKVAERLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAARQSH 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L QL G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLIEACERILILVDQLADEGIVLEHLDLGGGVGIVYQDE-TV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + + + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--PKNIPPLTANIVGPICETGDFLGKDRTIA-CEEGDLLVIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+GS++ +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNTRNRAAEVLVDGSEYRLIRRRETLEQQMANE 402 >gi|237752091|ref|ZP_04582571.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter winghamensis ATCC BAA-430] gi|229376658|gb|EEO26749.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter winghamensis ATCC BAA-430] Length = 415 Score = 292 bits (746), Expect = 8e-77, Method: Composition-based stats. Identities = 160/398 (40%), Positives = 231/398 (58%), Gaps = 4/398 (1%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L+ A TP Y Y IE + AF G +VCYALKANSN +VIK LA L SG Sbjct: 19 LQSAAEQFGTPLYVYDLERIEARFNALKQAFAGRKALVCYALKANSNLSVIKKLASLESG 78 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D VS GE++RA+ A +P +I++SGVGK EI A+ GI NVES+ E+ + A Sbjct: 79 ADCVSLGEIKRAVMAGIPKYKIIYSGVGKQDFEIKEAISLGILFINVESKEEMLRVEACA 138 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 LG A I+ RVNPDI+ TH ISTG KE+KFG+ I + +Y +A ++ G+ Sbjct: 139 RELGISARISIRVNPDIDPQTHPYISTGLKENKFGVSIEEAKGMYLHAHNAEFLEPIGIH 198 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 HIGSQ+ +++ ++ + + LTQ L + +I+ D+GGG+GI Y + S DYA Sbjct: 199 FHIGSQLTKLKPIAESAQKIAQLTQSLLALKIDIKFFDIGGGIGITYSDESTI-SPYDYA 257 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 I L I+ EPGRF+V + G+ +TKV+ K++ K FVI+D AMND +RP+LY Sbjct: 258 QAILAELRGLDVTIVCEPGRFIVGNSGVFLTKVLYQKENQGKRFVIVDGAMNDLIRPSLY 317 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 AYH+I + N A++ GPICE+GD++ N + GD+L + GAYG Sbjct: 318 AAYHQILALKNMESKGE---AEVAGPICESGDYLGKNIVLPHCERGDILAVLSAGAYGFS 374 Query: 378 QSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + YN+R E++V + ++R R +F++LI L+ Sbjct: 375 MASNYNTRPRCAEVVVENGKIRLVRKRESFEDLIALEK 412 >gi|295399037|ref|ZP_06809019.1| diaminopimelate decarboxylase [Geobacillus thermoglucosidasius C56-YS93] gi|294978503|gb|EFG54099.1| diaminopimelate decarboxylase [Geobacillus thermoglucosidasius C56-YS93] Length = 438 Score = 292 bits (746), Expect = 9e-77, Method: Composition-based stats. Identities = 133/423 (31%), Positives = 197/423 (46%), Gaps = 15/423 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQ 65 +G L V LA TP Y Y I F AF V YA KA S+ Sbjct: 12 KGHLEIGGVDTVDLAKEYGTPLYIYDVALIRARARAFKEAFQKHRVKSQVAYASKAFSSI 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+++ G LD+VS GEL AL A P ERI F G K+ +E+ +AL+SGI C V+ Sbjct: 72 AMVQLAEEEGLSLDVVSGGELYTALQAGFPPERIHFHGNNKSREELIMALESGIGCVVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--A 183 + EL+ L Q + GK I RV P + A+TH I TG+++ KFG ++ + Sbjct: 132 NFYELELLEQLSKRHGKTTAILIRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEALR 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + P + G+ HIGSQI + F A + + + G +++GGG GI Sbjct: 192 KALSSPSFSVLGIHCHIGSQIFETTGFVLAAQKIFQKIANWKEMYGFVPAVVNLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIH-------QYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y S+ P S+Y I +I +EPGR +V D G + + S K+ Sbjct: 252 RYTSEDDPIPVSEYVDKIIEEVKKQVNEQNIPMPEIWIEPGRSIVGDAGTTIYSIGSQKE 311 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + + +D M+D +RP LY+A +E N D + I G CE+GD + + Sbjct: 312 VPNVRRYVAVDGGMSDNIRPALYEAKYEAVL-ANRVLDEKNEIVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + PGD L + TGAYG + YN + V + ++ R T+++L+ LD Sbjct: 371 LPLPKANPGDYLAVFCTGAYGYSMANNYNRIPRPAVVFVENGEAQLVVKRETYEDLVRLD 430 Query: 415 SIP 417 +P Sbjct: 431 -LP 432 >gi|312110358|ref|YP_003988674.1| diaminopimelate decarboxylase [Geobacillus sp. Y4.1MC1] gi|311215459|gb|ADP74063.1| diaminopimelate decarboxylase [Geobacillus sp. Y4.1MC1] Length = 438 Score = 292 bits (746), Expect = 9e-77, Method: Composition-based stats. Identities = 133/423 (31%), Positives = 197/423 (46%), Gaps = 15/423 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQ 65 +G L V LA TP Y Y I F AF V YA KA S+ Sbjct: 12 KGHLEIGGVDTVDLAKEYGTPLYIYDVALIRARARAFKEAFQKHRVKSQVAYASKAFSSI 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+++ G LD+VS GEL AL A P ERI F G K+ +E+ +AL+SGI C V+ Sbjct: 72 AMVQLAEEEGLSLDVVSGGELYTALQAGFPPERIHFHGNNKSREELIMALESGIGCVVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--A 183 + EL+ L Q + GK I RV P + A+TH I TG+++ KFG ++ + Sbjct: 132 NFYELELLEQLSKRHGKTTAILIRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEALR 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + P + G+ HIGSQI + F A + + + G +++GGG GI Sbjct: 192 KALSSPSFSVLGIHCHIGSQIFETTGFVLAAQKIFQKIANWKAMYGFVPAVVNLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIH-------QYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y S+ P S+Y I +I +EPGR +V D G + + S K+ Sbjct: 252 RYTSEDDPIPVSEYVDKIIEEVKKQVNEQNIPMPEIWIEPGRSIVGDAGTTIYSIGSQKE 311 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + + +D M+D +RP LY+A +E N D + I G CE+GD + + Sbjct: 312 VPNVRRYVAVDGGMSDNIRPALYEAKYEAVL-ANRVLDEKNEIVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + PGD L + TGAYG + YN + V + ++ R T+++L+ LD Sbjct: 371 LPLPKANPGDYLAVFCTGAYGYSMANNYNRIPRPAVVFVENGEAQLVVKRETYEDLVRLD 430 Query: 415 SIP 417 +P Sbjct: 431 -LP 432 >gi|194334306|ref|YP_002016166.1| diaminopimelate decarboxylase [Prosthecochloris aestuarii DSM 271] gi|194312124|gb|ACF46519.1| diaminopimelate decarboxylase [Prosthecochloris aestuarii DSM 271] Length = 416 Score = 292 bits (746), Expect = 9e-77, Method: Composition-based stats. Identities = 163/414 (39%), Positives = 232/414 (56%), Gaps = 4/414 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y + L E V+L+ LA TP + S A+ + Y F AF + CY++KAN Sbjct: 6 FFSYKDTVLSCEGVALDALAAEYSTPLFVVSRNALVEQYRAFEEAFSSLSHFTCYSVKAN 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 N VIK L+ G G D+ S GEL RAL A V ++I+ +GVGK+ +I+ ALQSGI+ Sbjct: 66 FNIHVIKALSDQGCGCDVNSGGELFRALKAGVDPQKIIMAGVGKSDQDIEYALQSGIFML 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ES SEL+ + A LG A + R+NP++ A TH I+TG ++KFGI + ++ Sbjct: 126 KAESLSELRHIEAVARRLGVTASVGVRINPNVTAETHPYITTGDSKEKFGIDEGSLDEMF 185 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 ++ V +DMHIGSQI E +H A + L D+ R+ G +I ++D+GGG + Sbjct: 186 DLFKSMKHVNFMCLDMHIGSQIFDTEFYHAATEKLLDVLDAARAKGFSIDYLDIGGGFPV 245 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA-DKTF 301 Y +AS++ II EPGRF+ A+ G++VTKV+ K++ K F Sbjct: 246 TYEPQKPATPIEQFASVLIPVLKKTGTTIIFEPGRFIAANSGVMVTKVLYRKRNHIGKEF 305 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 VI+D M + +RP LY +YHEI + I AD+VGP+CE+GDF A R I Sbjct: 306 VIVDAGMTELIRPALYQSYHEIIGVKQQ---EATIVADVVGPVCESGDFFARGRTIDAVG 362 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 G+ L I GAYGAV S YN RL E+MV+ + +IR R TF++LIE + Sbjct: 363 EGEYLAILSAGAYGAVMSNNYNGRLRPAEVMVDNGRTSLIRKRDTFEQLIENEV 416 >gi|149926604|ref|ZP_01914864.1| diaminopimelate decarboxylase [Limnobacter sp. MED105] gi|149824533|gb|EDM83749.1| diaminopimelate decarboxylase [Limnobacter sp. MED105] Length = 435 Score = 292 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 163/419 (38%), Positives = 239/419 (57%), Gaps = 9/419 (2%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKA 61 F G L EN L LA TP Y YS ++I+ Y +++A G +CYA+KA Sbjct: 16 QFDKASGELQFENTELSGLAQEFGTPLYVYSASSIKAAYRAYASACQGLAHVTICYAVKA 75 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN ++K LA G+G DIVS GEL R +AA E+ VF+GVGK++ EI+ AL G+ C Sbjct: 76 NSNIHILKLLAQEGAGFDIVSAGELARVIAAGGAPEKAVFAGVGKSMQEIEYALGQGVGC 135 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVESE+E++ + A L +KA ++ RVNPD++A TH ISTG KE+KFG+ ++ + Sbjct: 136 FNVESEAEMERVALVAEKLQRKANVSLRVNPDVDAKTHPYISTGLKENKFGVSMNAAKRV 195 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y +A+ P + + G+D HIGSQ+ + A + L QL + G I H+D+GGG+G Sbjct: 196 YQFANAHPWLNVHGIDCHIGSQLTDASPYFDALDRVLALLDQLSAEGIEINHLDLGGGIG 255 Query: 242 IAYHSDHRPPSSSDY------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 I Y + P + Q G + EPGR +V + G+L+T+V +K+ Sbjct: 256 IRYLDETPPTPAEVLPKLIAKVQSWAQAKGRSMPTLSFEPGRSIVGNAGVLLTQVEFLKE 315 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + K F I+D AMND MRP +Y A+H + + N D+VGP+CE+GD++A NR Sbjct: 316 NEGKHFAIVDAAMNDLMRPAMYKAFHGVVAVQNNPHAAAQE-YDVVGPVCESGDWLAKNR 374 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 +A GD L I GAYG + YNSR E+++ S+ +IR R T ++ + + Sbjct: 375 TLA-IEQGDYLAILSAGAYGQTMASNYNSRGRAAEVLLENSKVTLIRRRETIEDQLRPE 432 >gi|158312466|ref|YP_001504974.1| diaminopimelate decarboxylase [Frankia sp. EAN1pec] gi|158107871|gb|ABW10068.1| diaminopimelate decarboxylase [Frankia sp. EAN1pec] Length = 437 Score = 292 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 145/430 (33%), Positives = 234/430 (54%), Gaps = 14/430 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G+L E L ++A TP Y YS + +Y+ F+ AF+ ++ ++C++ K Sbjct: 1 MDEFSYRDGTLWCEQTELREVAEKFGTPTYVYSAATLVDHYVRFAKAFESINPLICFSAK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SN +++ LA G+G+D VS GEL RAL A V ERIV +GVGK++DE+ A++ I Sbjct: 61 ALSNVHLLRLLAGQGAGIDTVSGGELHRALVAGVDPERIVLAGVGKSVDELRAAVRHDIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI--NANTHKKISTGKKEDKFGIPIHQI 178 C NVESE+E++ L + A ++ +A RVNPDI + T + +T + KFG+ I + Sbjct: 121 CINVESEAEVELLARVAREEDRRPRLAIRVNPDIAPDMRTPARTTTAIRGAKFGVDIERA 180 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 +L+ AST ++ G +HIGS I + A + LT L ++GH++ ++VGG Sbjct: 181 AALFRAASTDEFLRAEGFHVHIGSPIFDPRVYATALDRILALTAGLEADGHSVTTLNVGG 240 Query: 239 GLGIAYHS--DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 G Y ++ Q F + +++ EPGR + A+ GIL+ V K++ Sbjct: 241 GFPAEYTEGSAPGWDDFAEAICPRLQGFVDRGGQVVFEPGRTIAANAGILLATVRYRKRA 300 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH----------IHADIVGPICE 346 D+ V++D M +R +YD+YH + + G + D+VGPICE Sbjct: 301 GDRELVVIDAGMTHIVRAAMYDSYHFMWPVTPVNGTVPRSRDQQSIDDLVDYDVVGPICE 360 Query: 347 TGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 + D++A R + GDL+ I GAYG + YNS+L E++V G + +IR R T Sbjct: 361 SSDYLAKGRALPAMVSGDLIAIFSAGAYGMTMTSNYNSQLRPAEVLVRGGRADLIRRRET 420 Query: 407 FQELIELDSI 416 + +L+ L+ + Sbjct: 421 YDDLVALELL 430 >gi|126176184|ref|YP_001052333.1| diaminopimelate decarboxylase [Shewanella baltica OS155] gi|160877194|ref|YP_001556510.1| diaminopimelate decarboxylase [Shewanella baltica OS195] gi|125999389|gb|ABN63464.1| diaminopimelate decarboxylase [Shewanella baltica OS155] gi|160862716|gb|ABX51250.1| diaminopimelate decarboxylase [Shewanella baltica OS195] gi|315269398|gb|ADT96251.1| diaminopimelate decarboxylase [Shewanella baltica OS678] Length = 414 Score = 292 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 187/416 (44%), Positives = 257/416 (61%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +LHAE + LA TP Y YS +E+++ F+NA ++CYA+K Sbjct: 1 MDHFLYQQNALHAEGCQVADLAQTYGTPLYIYSRATLERHWHAFNNAVADHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT E++ AL GIY Sbjct: 61 ANANLAVLNVLARLGSGFDIVSGGELARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A LGK AP++ R+NPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESSAELELLNLVAGRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEI 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A LP +K+ GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 VFARAHALPHLKVKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y PP YA+ I G+ Q K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTY-DAETPPHPDVYAAAILARLGDRQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ I +V D DIVGP+CETGDF+ NR++AL Sbjct: 300 FAIVDGAMNDLIRPALYSAWQNIIPVV--PRDSEAYEFDIVGPVCETGDFLGKNRQLALA 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 LL + +GAYG + YN+R E+MV+G Q ++R R +L + + + Sbjct: 358 AGD-LLAVRSSGAYGFAMASNYNTRPRAAEVMVDGEQAFLVREREKLSQLWQGEQL 412 >gi|154174502|ref|YP_001408878.1| diaminopimelate decarboxylase [Campylobacter curvus 525.92] gi|112803741|gb|EAU01085.1| diaminopimelate decarboxylase [Campylobacter curvus 525.92] Length = 399 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 162/400 (40%), Positives = 228/400 (57%), Gaps = 4/400 (1%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + +LA TP Y Y I Y +AF +++CYA+KANSN +V+K LA LG Sbjct: 1 MDFNELAREYGTPLYVYDFDYITNRYNMLKDAFSARKSLICYAVKANSNLSVLKLLASLG 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G D VS GE+RRAL A +I+ SGVGK DE++ AL+S I N+ESE+E+ L Sbjct: 61 AGFDCVSIGEVRRALLAGAKKYQIILSGVGKRDDELEEALKSDILMINLESEAEMYRLED 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 L KA I+ RVNPD++A TH ISTG E+KFG+ I+ +Y +A ++ G Sbjct: 121 ITKKLNLKARISIRVNPDVDAKTHPYISTGLNENKFGVDINTAKKMYIHAKNSAALEPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQ+ IE +A ++ +L ++L++ +I+ DVGGG+GI Y + S D Sbjct: 181 VHFHIGSQLTNIEPIIEAAGIVSELMRELKALEIDIKFFDVGGGIGIIYQ-NETDISLYD 239 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I G I+ EPGRF+V + G +T V+ K + K F+I+D AMND +RP+ Sbjct: 240 YAQGILAKLGGQDVTIVCEPGRFIVGNAGYFLTSVLYEKFNKQKRFIIVDGAMNDLIRPS 299 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY AYH I+ + D+VGPICE+GDF A N + GD++ I+ GAYG Sbjct: 300 LYGAYHGISVVGKNTSAGA---CDVVGPICESGDFFAKNLNLPACESGDIIVIKSAGAYG 356 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 S YNSR E+ V +IR R F+++I L+ Sbjct: 357 FSMSSNYNSRARAAEVAVQDKAHRLIRKRENFEDIIALEK 396 >gi|217975044|ref|YP_002359795.1| diaminopimelate decarboxylase [Shewanella baltica OS223] gi|217500179|gb|ACK48372.1| diaminopimelate decarboxylase [Shewanella baltica OS223] Length = 414 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 187/416 (44%), Positives = 257/416 (61%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +LHAE + LA TP Y YS +E+++ F+NA ++CYA+K Sbjct: 1 MDHFLYQQNALHAEGCQVADLAQTYGTPLYIYSRATLERHWHAFNNAVADHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT E++ AL GIY Sbjct: 61 ANANLAVLNVLARLGSGFDIVSGGELARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A LGK AP++ R+NPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESSAELEQLNLVAGRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEI 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A LP +K+ GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 VFARAHALPHLKVKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y PP YA+ I G+ Q K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTY-DAETPPHPDVYAAAILARLGDRQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ I +V D DIVGP+CETGDF+ NR++AL Sbjct: 300 FAIVDGAMNDLIRPALYSAWQNIIPVV--PRDSEAYEFDIVGPVCETGDFLGKNRQLALA 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 LL + +GAYG + YN+R E+MV+G Q ++R R +L + + + Sbjct: 358 AGD-LLAVRSSGAYGFAMASNYNTRPRAAEVMVDGEQAFLVREREKLSQLWQGEQL 412 >gi|90408777|ref|ZP_01216922.1| diaminopimelate decarboxylase [Psychromonas sp. CNPT3] gi|90310121|gb|EAS38261.1| diaminopimelate decarboxylase [Psychromonas sp. CNPT3] Length = 420 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 184/422 (43%), Positives = 251/422 (59%), Gaps = 7/422 (1%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L E+V++E + TP Y YS IE+++ A M+CYA+ Sbjct: 1 MDHFNYQTDGRLFVEDVAIEDIIKKAGTPAYVYSRATIERHWKGLDKAASAYPHMICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ +A LGSG DIVS GEL R + A +++VFSGVGKT EI ALQ+ I Sbjct: 61 KANSNLGVLNIMARLGSGFDIVSAGELLRVIQAGGDPKKVVFSGVGKTEIEIATALQASI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 +CFN+ES SEL +N A SL KAPI+ R+NP+I+A TH ISTG KE+KFGI I Q Sbjct: 121 FCFNIESISELYRINSVAQSLNIKAPISIRINPNIDAGTHPYISTGLKENKFGIEIEQAL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y A L ++I GVD HIGSQI + F +A L L +L G I H+D+GGG Sbjct: 181 NVYLLAERLEFIEIKGVDCHIGSQITTLAPFLEALDKLLVLIDELEEVGITITHLDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + PP DY I + G+ K++ EPGR ++A+ G+L+TKV +K + K Sbjct: 241 LGVPYQ-NETPPEPEDYMREIIKKMGSRNLKLLFEPGRSIMANAGVLITKVEYLKINEQK 299 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALNRK 356 F I+D AMND +RP LY+A+ EI I N R + DIVGPICE+ DF+ +R Sbjct: 300 NFAIVDAAMNDLLRPALYNAWQEIIPINNKLQTSTIRPERNYDIVGPICESADFLGKDRT 359 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-S 415 ++ GD L + +GAYG+ S YNSR E+MV+ + I+R R + L + Sbjct: 360 LS-VAEGDYLAVRSSGAYGSTMSSNYNSRCRPVEVMVDSEKAFIVREREEHRNLWAGEHV 418 Query: 416 IP 417 +P Sbjct: 419 LP 420 >gi|254468165|ref|ZP_05081571.1| diaminopimelate decarboxylase [beta proteobacterium KB13] gi|207086975|gb|EDZ64258.1| diaminopimelate decarboxylase [beta proteobacterium KB13] Length = 417 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 180/405 (44%), Positives = 245/405 (60%), Gaps = 4/405 (0%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 E+V L +A TP Y YS I NA +D ++C+A+KANSN +++K Sbjct: 12 HYFIEDVKLTDIAQKFGTPAYVYSKKHILDQINFLQNALSDIDHLICFAVKANSNLSILK 71 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G G DIVS GEL+R L +IVFSGVGK++ EI++AL + I FNVESE E Sbjct: 72 LFKECGCGFDIVSGGELQRVLTVDSLNSKIVFSGVGKSVSEIEMALNNNILAFNVESEEE 131 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L +N + L K A ++ RVNP+++A TH ISTG K++KFGI LY A+ L Sbjct: 132 LFRINDISQRLSKIAKVSIRVNPNVDAKTHPYISTGLKDNKFGIDETSAIKLYKKAAKLD 191 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 +KI+G+D HIGSQ+ + F AF L L +L SN ++HID+GGG+GI+Y+++ Sbjct: 192 HIKITGIDCHIGSQLTDLSPFEDAFIKLASLIDELESNQIAVEHIDIGGGIGISYNNEDI 251 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 P Y +I +Y KIILEPGRFL+ G+++T V IKKS K FV++D AMN Sbjct: 252 SPIDF-YVQMIKKYLLKYNKKIILEPGRFLIGKAGLMLTNVEYIKKSEHKNFVLVDAAMN 310 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 D MRP+LY+A+HE+ + N DIVGPICETGDF+A +R I GD+L I Sbjct: 311 DLMRPSLYNAFHEVINLSNTQDSND--IFDIVGPICETGDFLAKDRNI-KANQGDILAIM 367 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYG S YNSR +PEI+V+ +F++IR R F +LI + Sbjct: 368 DAGAYGFSMSSNYNSRPRVPEIIVDKDEFYLIRERENFSDLIAHE 412 >gi|296445377|ref|ZP_06887335.1| diaminopimelate decarboxylase [Methylosinus trichosporium OB3b] gi|296257138|gb|EFH04207.1| diaminopimelate decarboxylase [Methylosinus trichosporium OB3b] Length = 422 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 230/422 (54%), Positives = 301/422 (71%), Gaps = 2/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y G LHAE+V+L K+A V PFYCYS I +++ FS AF G+D +VCYA+K Sbjct: 1 MHHFDYRAGVLHAEDVALPKIAEDVGAPFYCYSAATIRRHFTVFSAAFAGLDALVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+ LA LG+G+D+VS GELRRA AA VPA +I FSGVGKT EI LA+ GI+ Sbjct: 61 ANSNQAVLALLAGLGAGMDVVSGGELRRARAAGVPASKITFSGVGKTAQEIALAIDEGIF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ + A + G++A I+ RVNPD++A TH KISTG E+KFG+P+ + Sbjct: 121 CFNVESEPELEAIAAIAAAKGRRAHISLRVNPDVDAKTHAKISTGLAENKFGVPLSRARD 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA A+ LPG+ I GVDMHIGSQI + F AF LL +L LR++GH I H+D+GGGL Sbjct: 181 IYAQAARLPGLDIVGVDMHIGSQITDLRPFDAAFSLLAELVVGLRADGHAISHVDLGGGL 240 Query: 241 GIAYH--SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 GI YH D YA ++ ++ G L CK++ EPGR +V + G+LVT+V+ +K+ Sbjct: 241 GIPYHAGEDPASYHPDRYAEIVRRHMGALGCKLLFEPGRLIVGNAGVLVTRVLYVKQGEA 300 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 KTFVI+D MND +RPTLYDA+HEI + PA R I AD+VGP+CETGD+IAL R I Sbjct: 301 KTFVIVDAGMNDLVRPTLYDAWHEIIPVTEPARGRNEILADVVGPVCETGDYIALGRSIP 360 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 P GDLL + +GAYGAVQ+GTYNSR LIPE++V+G+++ ++R R + + LI LDS+P Sbjct: 361 APAQGDLLAVLTSGAYGAVQAGTYNSRPLIPEVLVDGARWAVVRARPSIESLIALDSVPD 420 Query: 419 WL 420 WL Sbjct: 421 WL 422 >gi|15679335|ref|NP_276452.1| diaminopimelate decarboxylase [Methanothermobacter thermautotrophicus str. Delta H] gi|8134391|sp|O27390|DCDA_METTH RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|2622442|gb|AAB85813.1| diaminopimelate decarboxylase [Methanothermobacter thermautotrophicus str. Delta H] Length = 428 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 141/426 (33%), Positives = 204/426 (47%), Gaps = 17/426 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQ 65 +G L +LA TP Y I +NY AF G V YA KAN+N Sbjct: 10 KGHLLIGGADAVELADEYGTPLYVIDEMRIRENYRRLYRAFSGEYSRFQVFYACKANTNL 69 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 AV++ L GSG+D VS GE+ AL A +RI+++G DE+ AL SG+ Sbjct: 70 AVMRILEEEGSGIDAVSPGEIYTALMAGFDPDRILYTGNNVRDDELQFALDSGVRINVDS 129 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 L+ + I+FRVNP + A H+ TG + KFG+ + +Y A Sbjct: 130 RSQLLRLSE----IAPEGLRISFRVNPLVGAGHHEHCITGGEMSKFGVMEREAPEVYRMA 185 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAY 244 L + G+ HIGS I E F A + L D+ + + G + ID GGGLGI Y Sbjct: 186 MDLGF-EPVGIHAHIGSGILDPEPFMLAVETLMDIAGRVHEATGVEFEFIDFGGGLGIPY 244 Query: 245 HSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 + P ++AS I F + + + LEPGR++V D L+T+V +IK+S Sbjct: 245 TPEEEPLDIDEFASKITGLFKDKLSEYGLGRPMMCLEPGRYIVGDASYLLTRVNTIKES- 303 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + F +D N +RP +Y +YH I P D D+ G +CE+GD A +R++ Sbjct: 304 YRKFAGVDAGFNTLLRPAMYGSYHHILVAERPL-DEPSEKMDVAGNVCESGDLFARDRQL 362 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 GD+L I GAY S YNSR E++V + ++R R TF +L+ ++P Sbjct: 363 PEINEGDVLAIMNAGAYSFSMSSQYNSRPRPAEVLVREGKVDVVRERETFSDLLRGQNVP 422 Query: 418 AWLQKT 423 A L K Sbjct: 423 ARLLKR 428 >gi|297529532|ref|YP_003670807.1| diaminopimelate decarboxylase [Geobacillus sp. C56-T3] gi|297252784|gb|ADI26230.1| diaminopimelate decarboxylase [Geobacillus sp. C56-T3] Length = 439 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 130/424 (30%), Positives = 198/424 (46%), Gaps = 15/424 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSN 64 +G L V + +LA TP Y Y I F AF V YA KA S Sbjct: 11 EQGHLEIGGVDVVELAKTYGTPLYIYDVALIRARARAFKEAFQRHGVRAQVAYASKAFSA 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+++ A G LD+VS GEL ALAA P ERI F G K+ DE+ +AL+ GI C Sbjct: 71 VAIVQLAAEEGLSLDVVSGGELYTALAAGFPPERIHFHGNNKSRDELAMALEHGIGCIVA 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--Y 182 ++ EL+ + + A S G+ P+ RV P + A+TH I TG+++ KFG ++ + + Sbjct: 131 DNFYELELIEELAESSGRTVPVLLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEAF 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLG 241 ++ GV HIGSQI + F A + + + +++G +++GGG G Sbjct: 191 RRVMASAAFQLLGVHCHIGSQIFETAGFVLAAQKVFAKLAEWNKAHGFVPAVVNLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y + P + Y + +I +EPGR LV D G + + S K Sbjct: 251 IRYTEEDDPIPVTAYVDCIVEEVKRQAEACRLPLPEIWIEPGRSLVGDAGTTIYTIGSRK 310 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + I +D M+D +RP LY A +E G+ I G CE+GD + Sbjct: 311 EVPNVRTYIAVDGGMSDNIRPALYGAKYEAALANRVFGE-PTEVVSIAGKCCESGDMLIW 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + +PGD L + TGAYG + YN + V ++ R T+++LI+ Sbjct: 370 DIALPEAKPGDYLAVFCTGAYGYSMANNYNRLPRPAVVFVENGDAQLVVKRETYEDLIQY 429 Query: 414 DSIP 417 D +P Sbjct: 430 D-LP 432 >gi|293602585|ref|ZP_06685029.1| diaminopimelate decarboxylase [Achromobacter piechaudii ATCC 43553] gi|292819012|gb|EFF78049.1| diaminopimelate decarboxylase [Achromobacter piechaudii ATCC 43553] Length = 429 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 187/415 (45%), Positives = 255/415 (61%), Gaps = 5/415 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F+Y L+AE+V L+ LAH + TP Y YS A++ + T+ +A + +VCY +KAN Sbjct: 16 YFQYRNNVLYAEDVPLDHLAHGLGTPLYVYSRAALKAAWETYRSAIGPLPVLVCYGMKAN 75 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+K LG+G DIVS GEL+RALA +IVFSGVGK + E+ AL +G+ CF Sbjct: 76 SNLAVLKEFVRLGAGFDIVSGGELKRALAVGADPAKIVFSGVGKQVWEMRDALAAGVKCF 135 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE EL+ L+ A +G +AP++ RVNPD+NA TH ISTG KE+KFGI I +Y Sbjct: 136 NVESEGELRRLSDVAQEMGMRAPVSLRVNPDVNAQTHPYISTGLKENKFGIAIESALGVY 195 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A LPGV+I GVD HIGSQ+ I + A + L DL QL G I H+D+GGGLGI Sbjct: 196 LTAQALPGVEIVGVDCHIGSQLTDISPYFDALEKLLDLIGQLDQAGIRIAHLDLGGGLGI 255 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G +ILEPGR LV + G+L+T V +K + + Sbjct: 256 RYTDETPPSPKALLDRVFERLNARGQGHLHLILEPGRSLVGNAGVLLTTVQYLKHADARN 315 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LYDAYH + + AGD + DIVGP+CE+ D++A R +A Sbjct: 316 FAIVDAAMNDLLRPALYDAYHGVQPLRPRAGD--LVEYDIVGPVCESADWLAKGRALA-I 372 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GD+L +E GAY + YN+R E+MV+GS +H++R R T +L+ +S Sbjct: 373 QQGDVLAVESAGAYSMAMASNYNTRARAAEVMVDGSNYHVVRQRETLDDLLRGES 427 >gi|261417864|ref|YP_003251546.1| diaminopimelate decarboxylase [Geobacillus sp. Y412MC61] gi|319767324|ref|YP_004132825.1| diaminopimelate decarboxylase [Geobacillus sp. Y412MC52] gi|261374321|gb|ACX77064.1| diaminopimelate decarboxylase [Geobacillus sp. Y412MC61] gi|317112190|gb|ADU94682.1| diaminopimelate decarboxylase [Geobacillus sp. Y412MC52] Length = 439 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 130/424 (30%), Positives = 198/424 (46%), Gaps = 15/424 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSN 64 +G L V + +LA TP Y Y I F AF V YA KA S Sbjct: 11 EQGHLEIGGVDVVELAKTYGTPLYIYDVALIRARARAFKEAFQRHGVRAQVAYASKAFSA 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+++ A G LD+VS GEL ALAA P ERI F G K+ DE+ +AL+ GI C Sbjct: 71 VAIVQLAAEEGLSLDVVSGGELYTALAAGFPPERIHFHGNNKSRDELAMALEHGIGCIVA 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--Y 182 ++ EL+ + + A S G+ P+ RV P + A+TH I TG+++ KFG ++ + + Sbjct: 131 DNFYELELIEELAESSGRTVPVLLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEAF 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLG 241 ++ GV HIGSQI + F A + + + +++G +++GGG G Sbjct: 191 RRVMASAAFQLLGVHCHIGSQIFETAGFVLAAQKVFAKLAEWNKAHGFVPAVVNLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y + P + Y + +I +EPGR LV D G + + S K Sbjct: 251 IRYTEEDDPIPVTAYVDCIVEEVKRQAEACRLPLPEIWIEPGRSLVGDAGTTIYTIGSRK 310 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + I +D M+D +RP LY A +E G+ I G CE+GD + Sbjct: 311 EVPNVRTYIAVDGGMSDNIRPALYGAKYEAALANRVFGE-PTEVVSIAGKCCESGDMLIW 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + +PGD L + TGAYG + YN + V ++ R T+++LI+ Sbjct: 370 DIALPEAKPGDYLAVFCTGAYGYSMANNYNRLPRPAVVFVENGDAQLVVKRETYEDLIQY 429 Query: 414 DSIP 417 D +P Sbjct: 430 D-LP 432 >gi|171060084|ref|YP_001792433.1| diaminopimelate decarboxylase [Leptothrix cholodnii SP-6] gi|170777529|gb|ACB35668.1| diaminopimelate decarboxylase [Leptothrix cholodnii SP-6] Length = 422 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 173/416 (41%), Positives = 245/416 (58%), Gaps = 5/416 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 L+ E+ L LA TP Y YS ++ + A G ++CYA+KAN Sbjct: 8 HLARRGRDLYLEDCQLATLAQQHGTPLYVYSQASMLDALAAYQRALAGRPHLICYAMKAN 67 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ AV++T A G G DIVS GEL+R LAA A ++VFSGVGKT E+ AL++G+ CF Sbjct: 68 SSLAVLQTFARAGCGFDIVSGGELQRVLAAGASASKVVFSGVGKTRTEMRQALEAGVRCF 127 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESESEL L+Q AV LG +AP++ RVNPD++A TH ISTG K +KFGI Q ++Y Sbjct: 128 NVESESELALLSQVAVELGVRAPVSLRVNPDVDAGTHPYISTGLKGNKFGIAHEQALAVY 187 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +A+ LPG+ + G+D HIGSQ+ ++ F A + DL + + + G + H+D+GGGLGI Sbjct: 188 RHAAQLPGIAVRGIDCHIGSQLTEVAPFLDALDRILDLVEAIEAAGITLHHLDLGGGLGI 247 Query: 243 AYHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + A G+ +I+ EPGR LV + G+L+T+V+ +K K Sbjct: 248 TYTDETPPSADELIAQLLARIDARGHGHREIVFEPGRSLVGNAGVLLTEVLYLKPGETKN 307 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND MRP +Y+A+ I D + D+VGP+CE+GD++ R++A Sbjct: 308 FCIVDAAMNDLMRPAMYEAWMGIVPCTER--DAPAVTWDVVGPVCESGDWLGRERELA-V 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGD L I GAYG + YN+R E+MV G Q +IR R + EL + + Sbjct: 365 APGDHLAILSAGAYGMAMASNYNTRGRAAEVMVRGHQATLIRRRESAAELYANERL 420 >gi|207744536|ref|YP_002260928.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum IPO1609] gi|206595942|emb|CAQ62869.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum IPO1609] Length = 407 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 177/407 (43%), Positives = 251/407 (61%), Gaps = 5/407 (1%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 E V+LE +A TP Y YS A+ NY ++ A +G + V YA+KANSN AV++ Sbjct: 1 MVEGVALEAIAAQFGTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIF 60 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 A LG+G DIVS GELRR LAA A +VFSGVGKT DE+ LAL++G+ CFNVES EL Sbjct: 61 AQLGAGFDIVSGGELRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELH 120 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 LN+ A SLGK AP++ RVNPD++A TH ISTG K +KFG+ ++ Y A+ +P + Sbjct: 121 RLNEVAGSLGKTAPVSLRVNPDVDAKTHPYISTGLKGNKFGVAFEEVLPTYRAAAAMPNL 180 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 ++ G+D HIGSQI ++ + A + D+ +L G + HIDVGGGLGI Y + P Sbjct: 181 RVVGIDCHIGSQITEVSPYLDAIDKVLDVVARLDGEGIRLSHIDVGGGLGITYTDETPPD 240 Query: 252 SSSDYASLIHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 ++ +L+ + ++ EPGR LV + G+L+T+V +K A K F I+D AMN Sbjct: 241 ITAFARTLLDRIEQRGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMN 300 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 D RP +Y+AYH I + +G D+VGP+CE+GD++ +R + +PGDLL I Sbjct: 301 DLARPAMYEAYHHIVPVRERSGAA--TVYDVVGPVCESGDWLGRDRAL-DVQPGDLLAIL 357 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GAYG S YN+R E++V+G + H+ R R F++LI + + Sbjct: 358 SAGAYGFTMSSNYNTRNRAAEVIVDGDRVHVARERERFEDLIRGEQL 404 >gi|207721858|ref|YP_002252296.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum MolK2] gi|206587025|emb|CAQ17609.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum MolK2] Length = 407 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 177/407 (43%), Positives = 252/407 (61%), Gaps = 5/407 (1%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 E V+LE +A TP Y YS A+ NY ++ A +G + V YA+KANSN AV++ Sbjct: 1 MVEGVALEAIAAQFGTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIF 60 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 A LG+G DIVS GELRR LAA A +VFSGVGKT DE+ LAL++G+ CFNVES EL Sbjct: 61 AQLGAGFDIVSGGELRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELH 120 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 LN+ A SLGK AP++ RVNPD++A TH ISTG K +KFG+ ++ Y A+ +P + Sbjct: 121 RLNEVAGSLGKTAPVSLRVNPDVDAKTHPYISTGLKGNKFGVAFEEVLPTYRAAAAMPNL 180 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 ++ G+D HIGSQI ++ + A + D+ +L + G + HIDVGGGLGI Y + P Sbjct: 181 RVVGIDCHIGSQITEVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGGLGITYTDETPPD 240 Query: 252 SSSDYASLIHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 ++ +L+ + ++ EPGR LV + G+L+T+V +K A K F I+D AMN Sbjct: 241 ITAFARTLLDRIEQRGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMN 300 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 D RP +Y+AYH I + +G D+VGP+CE+GD++ +R + +PGDLL I Sbjct: 301 DLARPAMYEAYHHIVPVRERSGAA--TVYDVVGPVCESGDWLGRDRAL-DVQPGDLLAIL 357 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GAYG S YN+R E++V+G + H+ R R F++LI + + Sbjct: 358 SAGAYGFTMSSNYNTRNRAAEVIVDGDRVHVARERERFEDLIRGEQL 404 >gi|302879299|ref|YP_003847863.1| diaminopimelate decarboxylase [Gallionella capsiferriformans ES-2] gi|302582088|gb|ADL56099.1| diaminopimelate decarboxylase [Gallionella capsiferriformans ES-2] Length = 417 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 190/414 (45%), Positives = 261/414 (63%), Gaps = 4/414 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + F Y LHAE+VSL +A V +TP Y YS A+ + + FS+A G + ++CYA+KA Sbjct: 5 NQFNYINNQLHAEDVSLSDIAAVHETPCYVYSRAALTEGFREFSDALQGREHLICYAVKA 64 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N+N A++ A LG+G DIVS GEL+R LAA A ++VFSGVGKT E+ LAL +GI C Sbjct: 65 NANLAILNVFARLGAGFDIVSGGELQRVLAAGGDARKVVFSGVGKTRAEMRLALDAGILC 124 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVES +EL LN+ A S+GK A I+ RVNPD++A TH ISTG K++KFG+ + +L Sbjct: 125 FNVESAAELDRLNEVAGSMGKIAAISLRVNPDVDAKTHPYISTGLKQNKFGVAYTEAVAL 184 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y AS L ++I+G+D HIGSQ+ + F A + + L +L S G ++H+D+GGGLG Sbjct: 185 YRKASGLKNLRITGMDCHIGSQLTETSPFIAAIEKILLLVDELASEGIALEHLDLGGGLG 244 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 I Y + PP+ +Y + + K+ILEPGR LV + G+L+T+V IK +K F Sbjct: 245 ICYDDE-TPPAIGEYIAALLGALQGRTQKLILEPGRVLVGNAGVLLTRVEYIKPGEEKNF 303 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 I+D AMND MRP LYDAYH I +V A ++VGPICETGDFI R++A Sbjct: 304 AIVDAAMNDLMRPALYDAYHGILPVVREAH--AVQSYEVVGPICETGDFIGHARELA-IA 360 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 P LL + GAYG S YN+R E+MV+G+ H++R R T +L + Sbjct: 361 PHSLLAVMSAGAYGMSMSSNYNTRPRAAEVMVDGTAVHLVRERETVPQLFSGEK 414 >gi|294788607|ref|ZP_06753849.1| diaminopimelate decarboxylase [Simonsiella muelleri ATCC 29453] gi|294483484|gb|EFG31169.1| diaminopimelate decarboxylase [Simonsiella muelleri ATCC 29453] Length = 406 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 182/403 (45%), Positives = 251/403 (62%), Gaps = 4/403 (0%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 EN++ LA TP Y YS A+ + + AF G ++CYA+KANSN ++IK Sbjct: 4 FCENIAYSYLAEHFGTPLYVYSENALTNAFRAYEMAFSGSQPLICYAVKANSNLSIIKHF 63 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 + LGSG D VS GE+ R LAA A++I+FSGVGK++ EI AL +GI CFNVES EL Sbjct: 64 SELGSGFDTVSGGEIARVLAAGGAAKKIIFSGVGKSVAEIAFALNAGIKCFNVESLPELD 123 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 +NQ A +GK API+ R+NPD++A TH ISTG K +KFGI + Q Y YA+ + Sbjct: 124 RINQVAEQMGKIAPISLRINPDVDAKTHPYISTGLKANKFGIAMSQAEQAYQYAANQSHL 183 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 KI G+D HIGSQ+ + +A + L L +L + G ++HID+GGG+GI YH + P Sbjct: 184 KIMGIDCHIGSQLIDLSPLVEACQRLLMLVDKLSAQGIELEHIDLGGGVGIVYH-NEPIP 242 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + ++YA + + ++LEPGR LV + G L+T+V +K+ +K FVI+D AMND Sbjct: 243 NLNEYAQAVQNLLAGRKLDLVLEPGRSLVGNAGTLLTRVEFVKQGEEKNFVIVDAAMNDL 302 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 MRP LY AYH I + I ADIVGPICETGDF+A NR+IA GDLL + Sbjct: 303 MRPALYQAYHHIENAEK--NKQPEILADIVGPICETGDFLAQNRQIA-AEAGDLLLVHSA 359 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G + IR R T ++++ L+ Sbjct: 360 GAYGASMASNYNTRCRAAEVLVSGDKVREIRQRETLEDVMRLE 402 >gi|323702566|ref|ZP_08114229.1| diaminopimelate decarboxylase [Desulfotomaculum nigrificans DSM 574] gi|323532540|gb|EGB22416.1| diaminopimelate decarboxylase [Desulfotomaculum nigrificans DSM 574] Length = 446 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 132/435 (30%), Positives = 204/435 (46%), Gaps = 13/435 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF-DGMDTMVCYALKANSNQA 66 +G L +LA TP Y +N + AF + V YA K +N A Sbjct: 12 KGHLEIGGCDTVELAQRFGTPLYVIDEALFRQNCRDYYRAFTEEYGAEVIYASKTLTNLA 71 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + G GLD+VS GEL A A P R+ F G K+ +E+ AL+ + V++ Sbjct: 72 VCTIVEQEGLGLDVVSGGELYTAAMARFPMHRVYFHGNNKSPEELRQALEYKVGRIVVDN 131 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 EL+ LNQ A L +A I R++P + A+TH+ I TG+ + KFG+ I ++ A Sbjct: 132 LYELELLNQIAGELATRAKIIIRLSPGVEAHTHEYIKTGQIDSKFGLAIENGMAMAAVKR 191 Query: 187 TLP--GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIA 243 L V++ G HIGSQI +++S+ A +++ D Q R+ G+ + +D+GGGLGI Sbjct: 192 CLELNNVELKGFHCHIGSQIFELQSYAHAAEVMMDFVQDVYRATGYLTEELDLGGGLGIY 251 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y P +YA ++ + KII+EPGR + G + V +IK Sbjct: 252 YCQGDEPRPVKEYADIMMGALKARAARYNLPLPKIIVEPGRSISGPAGTTLYTVGAIKDI 311 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D RP LY A +E N + I G CE+GD + + Sbjct: 312 PGIRKYVSVDGGMGDNPRPALYQAKYE-ACAANRMTEANTEKVSIAGKCCESGDMLIWDI 370 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ + GD+L + TGAY S YN ++V G + +I R + +LI D Sbjct: 371 ELPALQAGDILAVASTGAYNYSMSMNYNRLPRPAMVLVGGGKADLIVRREDYADLIRNDV 430 Query: 416 IPAWLQKTPKQSSEN 430 IP L+ + + + + Sbjct: 431 IPERLRSSVVKLASS 445 >gi|149194454|ref|ZP_01871551.1| Diaminopimelate decarboxylase [Caminibacter mediatlanticus TB-2] gi|149135629|gb|EDM24108.1| Diaminopimelate decarboxylase [Caminibacter mediatlanticus TB-2] Length = 402 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 168/396 (42%), Positives = 233/396 (58%), Gaps = 2/396 (0%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 + A TP Y Y EK Y AF +++ YA+KANSN +VIK A LGSG D Sbjct: 5 EFAKKYDTPLYVYDFNHFEKQYNELKQAFKARKSIIAYAIKANSNLSVIKKFASLGSGAD 64 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 VS GE++RAL A V +I+FSGVGK DEI AL I NVESE+ELK +++ A S Sbjct: 65 CVSIGEVKRALLAGVDKYKIIFSGVGKRDDEIKEALDKDILMLNVESEAELKRIDEIAKS 124 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + K+A I+ RVNPDI+ TH ISTG E+KFG+ I +Y A + G+ H Sbjct: 125 MNKEARISIRVNPDIDPKTHPYISTGLSENKFGVDIESAKKMYINAKKSKNLNPIGIHFH 184 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 IGSQ+ ++ +A +++ +L + L++ +I+ D+GGGLGI Y + DYA Sbjct: 185 IGSQLTELNPIKEASEIVANLVRSLKAINVDIKFFDIGGGLGIKYKDEETI-KPYDYAQA 243 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 I L II EPGRFLV + G +TKV+ K + DK FVI+D AMND +RP+LY+A Sbjct: 244 ILSTLSGLDVTIICEPGRFLVGNGGWFLTKVLYEKVNGDKRFVIVDGAMNDLIRPSLYNA 303 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 YH++ I + ++ A+IVGP+CE+GDF A + ++ PGDL+ I GAYG S Sbjct: 304 YHKVEVISSVKNPQIS-KANIVGPVCESGDFFAKDIEVPQTNPGDLIVIHSAGAYGFTMS 362 Query: 380 GTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 YN+R EI + + +IR R TF++LI + Sbjct: 363 SNYNTRPRPCEIAIEDGKDRVIRRRETFEDLIACEI 398 >gi|323519139|gb|ADX93520.1| diaminopimelate decarboxylase [Acinetobacter baumannii TCDC-AB0715] Length = 407 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 189/406 (46%), Positives = 262/406 (64%), Gaps = 3/406 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 +HAE SLE+LA TP Y YS A EK+YL AFD +D +C+A+K+NSN AV+ Sbjct: 1 MHAEQCSLEQLAQQFGTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNV 60 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 LA LG+G DIVS GEL R L A A +IVFSG+GKT +I+ +L GI CFNVES +EL Sbjct: 61 LAKLGAGFDIVSGGELARVLKAGGDASKIVFSGLGKTEADIETSLNVGIACFNVESYAEL 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGKKAPI+ RVNPD++A TH ISTG KE+KFGIP ++ Y YA++LP Sbjct: 121 DRIQKVAARLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYETYQYAASLPN 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++I G+D HIGSQ+ + + F A + + +L+ G N++HID+GGGLG+ Y + P Sbjct: 181 LEIVGIDCHIGSQLTETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGLGVCYKDE-TP 239 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 PS +YA+ + L K+ +EPGR + A+ G+L+TKV +K + + F I+D AMND Sbjct: 240 PSVEEYANSMKPALEKLGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRNFAIIDAAMND 299 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 +RP LY+A+ +I +V P D D+VG ICETGDFI +R +A + DLL + Sbjct: 300 LIRPALYEAWMDIQPVV-PRTDTEEKTWDLVGAICETGDFIGKDRSLA-LQENDLLTVLG 357 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GAYG V S YN+R E+MV+G + ++IR R T + L E + + Sbjct: 358 AGAYGFVMSSNYNTRGRAAEVMVSGEKSYLIRERETVESLWEKERL 403 >gi|91785428|ref|YP_560634.1| diaminopimelate decarboxylase [Burkholderia xenovorans LB400] gi|91689382|gb|ABE32582.1| diaminopimelate decarboxylase [Burkholderia xenovorans LB400] Length = 420 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 182/417 (43%), Positives = 248/417 (59%), Gaps = 5/417 (1%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 SAF Y +G LHAE VS LA TP Y YS A+ + ++ A G V A+KA Sbjct: 4 SAFDYVDGVLHAEGVSAVSLAEQFGTPLYVYSRAALTAAWNAYAGACAGRRASVHVAVKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN AV+ A LG+G DIVS GEL R LAA AE VFSGVGK +E+ AL +G+ C Sbjct: 64 NSNLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKNANEMREALAAGVKC 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVES EL LN A +GKKAP++ RVNPD++A TH ISTG K +KFG+ + Sbjct: 124 FNVESIPELDRLNAVAAEMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARAT 183 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A+ + +++ G+D HIGSQI + + A + +L +Q+ +G I+HIDVGGGLG Sbjct: 184 YQAAAGMANLEVVGIDCHIGSQITEAAPYLDAVDKVLELVEQIEQDGLKIRHIDVGGGLG 243 Query: 242 IAYHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 I Y + P + + G+ ++ EPGR LV + G+L+T+V +K A+K Sbjct: 244 ITYDDETPPEIGEFVRTVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEK 303 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND RP +Y+AYH I+ +V D D+VGP+CE+GD++ R +A Sbjct: 304 NFAIVDAAMNDLARPAMYEAYHAIDPVVKR--DVPAHVYDVVGPVCESGDWLGRERLLA- 360 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL I GAYG V S YN+R E+MV+G+Q H+ R R ++L ++I Sbjct: 361 VEPGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGTQVHVARAREEVRQLFVGETI 417 >gi|154686579|ref|YP_001421740.1| hypothetical protein RBAM_021480 [Bacillus amyloliquefaciens FZB42] gi|154352430|gb|ABS74509.1| LysA [Bacillus amyloliquefaciens FZB42] Length = 439 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 127/422 (30%), Positives = 196/422 (46%), Gaps = 15/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V LA TP Y Y I + +F AF + V YA KA S+ A Sbjct: 13 GHLEIGGVDALYLAEHYGTPLYVYDVALIRERAKSFKQAFIDADLKAQVAYASKAFSSVA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I+ G LD+VS GEL A+AA PA+RI F G K+ +E+ +AL I C V++ Sbjct: 73 MIQLAEQEGLSLDVVSGGELFTAVAAGFPADRIHFHGNNKSEEELKMALDHQIGCIVVDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--Y 184 E+ L + G+ + R+ P + A+TH I+TG+++ KFG +H A Sbjct: 133 FYEISLLAELCRKSGRTMDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQIEKAIEQ 192 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 +++ GV HIGSQI F A + + + R + + +++GGG GI Sbjct: 193 VLQSDHIRLLGVHCHIGSQIFDTAGFVLAAEKIFAKLNEWRESFGFVSEVLNLGGGFGIR 252 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P + Y I + +I +EPGR LV D G + + S K+ Sbjct: 253 YTEEDEPLHPAVYVEKIIEAVKENAALHAFDIPEIWIEPGRSLVGDAGTTLYTIGSQKEV 312 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M+D +RP LY A +E N G+ I G CE+GD + + Sbjct: 313 PGTRKYAAVDGGMSDNIRPALYQAKYEAVS-ANRIGEHHDKTVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GDLL + TGAYG + YN + V + H++ R T++++++LD Sbjct: 372 DLPEVKEGDLLAVFCTGAYGYSMANNYNRIPRPAVVFVEDGEAHLVIRRETYEDIVKLD- 430 Query: 416 IP 417 +P Sbjct: 431 LP 432 >gi|332977415|gb|EGK14192.1| diaminopimelate decarboxylase [Psychrobacter sp. 1501(2011)] Length = 447 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 179/414 (43%), Positives = 250/414 (60%), Gaps = 3/414 (0%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 Y +G L E VS ++L TP Y YS AI + Y +S++F +D VCYA+KANS Sbjct: 32 LSYQQGVLSIEAVSAQQLVEQYGTPLYVYSKKAILEAYQAYSDSFAEIDHQVCYAVKANS 91 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N AV+K LA G+G D+VS GEL R LA ++IVFSGVGKT+ E+ ALQ+GI CFN Sbjct: 92 NLAVLKVLAEAGAGFDLVSSGELARVLAVGADPKKIVFSGVGKTVSEMKAALQAGIGCFN 151 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 VES SEL LN+ A + KAPI+ RVNPD++A TH ISTG K++KFGI Y Sbjct: 152 VESLSELDRLNEVAAEMQVKAPISIRVNPDVDAKTHPYISTGLKDNKFGISHDVAVEAYK 211 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +A++L ++I G+D HIGSQ+ +I+ F A + +L L+ G ++HID+GGGLG+ Sbjct: 212 HANSLANLQIVGIDCHIGSQLTEIDPFVAALDKVCELIDALKQAGIELEHIDLGGGLGVI 271 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 Y + S++A+ + L K+ EPGR +VA+ G+L+T+V +K + K F I Sbjct: 272 YIDEQVA-EVSEFANALLPKLKQLGLKVFFEPGRSIVANAGVLLTQVEVLKPTEHKNFAI 330 Query: 304 LDVAMNDFMRPTLYDAYHEINY-IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +D AMND +RP LY A + P DIVG +CETGDF+A R ++ Sbjct: 331 VDAAMNDLIRPALYQAEMAVIPVNSQPQSQTQEQSWDIVGAVCETGDFLAKKRLLS-LAV 389 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 G++L I GAYG V S YNSR E+MV+ + ++R R T ++L + +S Sbjct: 390 GEVLAITGAGAYGFVMSSNYNSRPRPAEVMVSADKHQVVRKRETIEQLFDTESF 443 >gi|119899943|ref|YP_935156.1| LysA2 protein [Azoarcus sp. BH72] gi|119672356|emb|CAL96270.1| LysA2 protein [Azoarcus sp. BH72] Length = 424 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 183/406 (45%), Positives = 248/406 (61%), Gaps = 4/406 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V L LA TP Y YS A+ + + A G ++VCYA+KAN+N V+ Sbjct: 21 LMLEEVPLATLAERFGTPTYVYSRAALTAAFRDWQAALAGRRSLVCYAVKANANLGVLSV 80 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LG+G DIVS GEL R +AA A+R+VFSGVGK+ E+ AL +GI CFNVES EL Sbjct: 81 FAQLGAGFDIVSGGELARVIAAGGRADRVVFSGVGKSRAEMRQALAAGIRCFNVESAPEL 140 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + LN+ A LG++APIA RVNPD++ TH ISTG K +KFG+ + LY A+TLP Sbjct: 141 ERLNEVAGELGQRAPIALRVNPDVDPKTHPYISTGLKSNKFGVAFGEALELYRRAATLPH 200 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ISG+ HIGSQ+ +A + L QL + G + HID+GGGLGI Y + P Sbjct: 201 LRISGIACHIGSQLLDPAPVAEAAAKVLGLVDQLSAEGIVLDHIDLGGGLGIRYRDE-TP 259 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 PS + Y + + FG+ + +I EPGR LV + G+L+T+V +K +K F I+D AMND Sbjct: 260 PSVAAYLAPLLAAFGDRREEICFEPGRSLVGNAGLLLTRVEYLKHGEEKNFAIVDAAMND 319 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 RP LYDAYHE + D +IVGPICE+GDF+A +R++A R GDL+ + Sbjct: 320 LARPALYDAYHEAVAV--CRSDAPRQRYEIVGPICESGDFLAHDRELA-LRDGDLVALLS 376 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GAYG S YN+R E+MV+G Q H++R R T + L + + Sbjct: 377 AGAYGMTMSSNYNTRPRAAEVMVDGGQVHLVRERETVEALYAGEHL 422 >gi|78187207|ref|YP_375250.1| diaminopimelate decarboxylase [Chlorobium luteolum DSM 273] gi|78167109|gb|ABB24207.1| diaminopimelate decarboxylase [Chlorobium luteolum DSM 273] Length = 416 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 167/414 (40%), Positives = 234/414 (56%), Gaps = 4/414 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y G+L E V+L+ LA TP Y S +IE Y F AF G++ CY++KAN Sbjct: 6 AFHYDNGALFCEGVALKDLASRWGTPLYVTSKHSIEDRYREFEAAFSGLEHFTCYSVKAN 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 N +VIKTL LG G D+ S GEL RAL A VP RI+F+GVGK DEI AL SG+ Sbjct: 66 FNLSVIKTLGDLGCGCDVNSAGELFRALKAGVPGSRIIFAGVGKRPDEISYALLSGVLML 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ES SEL+ ++ A G AP+A R+NP++ A TH I+TG ++KFGI ++ ++ Sbjct: 126 KAESLSELRAIDAIAAERGLTAPVALRINPNVTAETHPYITTGDSKEKFGIDEAELPEVF 185 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 + L V++ G+DMHIGSQI E + A L D+ RS G ++ +D+GGG Sbjct: 186 SLLGELQHVRLVGLDMHIGSQIFDPEFYVAAITKLLDIFNYSRSKGFGVEFLDIGGGFPA 245 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI-KKSADKTF 301 Y +A I K+I EPGRFL+A+ +L+T+++ + K F Sbjct: 246 TYDPMKPETPLDRFADKIIPMLKPTGVKVIFEPGRFLLANASVLLTRILYRKRNHTGKEF 305 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 ++D M + +RP LY ++HE+ + + AD+VGPICE+ DF A R I Sbjct: 306 FVVDGGMTELIRPALYQSHHEVLSVTRHD---ETVVADVVGPICESSDFFARQRAIGDAP 362 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 G+LL + GAYGAV S YN RL E+MV GS +IR R +F++LI+ + Sbjct: 363 EGELLAVMTVGAYGAVMSSNYNGRLRPAEVMVEGSDVQVIRRRESFEQLIQNEV 416 >gi|288931191|ref|YP_003435251.1| diaminopimelate decarboxylase [Ferroglobus placidus DSM 10642] gi|288893439|gb|ADC64976.1| diaminopimelate decarboxylase [Ferroglobus placidus DSM 10642] Length = 419 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 157/423 (37%), Positives = 240/423 (56%), Gaps = 12/423 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F+ G LH E +S+ L TP Y S +++N + AF+ V YA+KAN+ Sbjct: 2 FESRNGVLHVEELSVIDLVERFGTPLYVTSYAKLKENIEAYKKAFNW--ARVLYAVKANN 59 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N A++K +A G D+ S+GEL +L A + I+F+G K+ +EI ++SG+ F+ Sbjct: 60 NLAIMKVIAKENFGADVFSQGELYLSLLAGFDKKFILFNGNSKSEEEIKAGIESGVK-FS 118 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 V+S EL T+++ A +G++ IAFRVNPDI+ TH KI+TG K+ KFGIP Q+ Y Sbjct: 119 VDSVDELYTISEIASEMGEEVEIAFRVNPDIDPKTHPKIATGLKKSKFGIPAEQVVETYR 178 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A LP V G+ HIGSQI +I F +A + DL +++ G +++ +DVGGGLGI Sbjct: 179 LALELPNVVPIGIHCHIGSQITEISPFVEAVNKIFDLAERVEELGIDLKFVDVGGGLGID 238 Query: 244 YHSDHRPPSSSDYASLIHQYFGNL------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 Y P+ D A+ + + ++ LEPGR LV + IL+T+V ++K++ Sbjct: 239 Y-EGKGVPTPEDLANALKPVYEERKSRLDSNPELWLEPGRSLVGNTTILLTRVNAVKRA- 296 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 K FV +D N +RP +Y AYH+I + + +VGPICE+GD + +RK+ Sbjct: 297 YKNFVAVDAGFNLLIRPAMYGAYHKIAVANKMDWEEEEV-YTVVGPICESGDVLGEDRKL 355 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 GD++ + GAYG V S YN R E++V GS+ ++IR + +F +LI IP Sbjct: 356 PRVEKGDIIAVFDAGAYGFVMSSQYNGRPRCAEVLVKGSEAYVIREKESFGDLIAKQKIP 415 Query: 418 AWL 420 +L Sbjct: 416 EFL 418 >gi|260220221|emb|CBA27542.1| Diaminopimelate decarboxylase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 464 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 171/417 (41%), Positives = 245/417 (58%), Gaps = 4/417 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 Y LH E SL+ LA TP + YS ++ + F G + +CYA+KAN Sbjct: 48 HVHYENSQLHVEGCSLDALASTHGTPLFVYSKASMLDALAAYQRGFAGRNARICYAMKAN 107 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ A+++ A G G DIVSEGEL R LAA A +++FSGVGKT E+ AL+ GI CF Sbjct: 108 SSLAILQLFAKAGCGFDIVSEGELARVLAAGADAGKVIFSGVGKTRAEMARALEVGIGCF 167 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+E+ LN+ A+ +GK+API+ RVNP+++ TH ISTG K +KFGI + Y Sbjct: 168 NVESEAEIDVLNEVALGMGKQAPISIRVNPNVDPKTHPYISTGLKGNKFGIAHERTLLTY 227 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LPG+K+ G+D HIGSQI + + A + DL + + + G I HID GGGLGI Sbjct: 228 QRAAALPGLKVVGIDCHIGSQITEETPYLDAMDRMLDLVESIEAAGIGIHHIDFGGGLGI 287 Query: 243 AYHSDHRPPSSSDYASLIH--QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y+ D P + + + L+ G Q ++++EPGR LV + G+ VT+V+ +K K Sbjct: 288 NYNGDTPPAADALWHKLLAKLDARGFGQRQLMIEPGRSLVGNAGVCVTEVLYMKPGEQKN 347 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL-HIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND RP +Y A+H I + A D+VGP+CE+GD+I +R + Sbjct: 348 FCIVDAAMNDLPRPAMYQAFHTIVPVKQAASQSSGAEVFDVVGPVCESGDWIGHDRTLQ- 406 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L + GAY S YNSR E++V+G+ H+IR R +F + I + + Sbjct: 407 VQSGDKLAVLSAGAYCMSMSSNYNSRPKAAEVLVDGAHSHLIRQRDSFADQIRGEKL 463 >gi|33594517|ref|NP_882161.1| diaminopimelate decarboxylase [Bordetella pertussis Tohama I] gi|33564593|emb|CAE43910.1| diaminopimelate decarboxylase [Bordetella pertussis Tohama I] gi|332383928|gb|AEE68775.1| diaminopimelate decarboxylase [Bordetella pertussis CS] Length = 429 Score = 290 bits (741), Expect = 4e-76, Method: Composition-based stats. Identities = 181/418 (43%), Positives = 259/418 (61%), Gaps = 6/418 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F+Y G LHAE+V L+ LA + TP Y YS A+ + T+ +A +VC+ +K N Sbjct: 15 HFRYQNGVLHAEDVPLDSLAAQLGTPLYVYSRAALRSAWETYRDAIGERPVLVCFGMKTN 74 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+K A LG+G DIVS GEL R LA ++VFSGVGK E+ AL++ + CF Sbjct: 75 SNLAVLKEFARLGAGFDIVSGGELARVLAVGGDPAKVVFSGVGKQAWEMRAALEADVKCF 134 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL+ L+ AVS+G++A ++ RVNPD++A TH ISTG KE+KFGI I + Y Sbjct: 135 NVESEAELERLSDVAVSMGRRARVSLRVNPDVDAQTHPYISTGLKENKFGIAIESAPAAY 194 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LPGV++ GVD HIGSQ+ I + A + L DL +QL NG I+H+D+GGGLGI Sbjct: 195 RLAARLPGVEVVGVDCHIGSQLTDISPYFDALEKLLDLIEQLAENGIAIKHLDLGGGLGI 254 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G I+LEPGR L + G+L+T V +K + + Sbjct: 255 RYTDEIPPSPKALLDRVFERINARGLGHLHIVLEPGRSLAGNAGVLLTTVQYLKHAEARN 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY+AYH + + A R I D+VGP+CE+ D++A R +A Sbjct: 315 FAIVDAAMNDLLRPALYEAYHGVQPVTPRADKR--IEYDVVGPVCESADWLARGRALA-I 371 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 + GD+L +E GAY V + YN+R+ E+MV+G++ +I+R R T + L + + ++P Sbjct: 372 QAGDVLAVESAGAYSMVMASNYNTRVRAAEVMVDGNRHYIVRQRETLESLYQGESTLP 429 >gi|187476584|ref|YP_784608.1| diaminopimelate decarboxylase [Bordetella avium 197N] gi|115421170|emb|CAJ47654.1| diaminopimelate decarboxylase [Bordetella avium 197N] Length = 429 Score = 290 bits (741), Expect = 4e-76, Method: Composition-based stats. Identities = 182/418 (43%), Positives = 260/418 (62%), Gaps = 6/418 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y G LHAE+V+L+ LA + TP Y YS A+ Y ++ A +VCY +KAN Sbjct: 15 HFHYKHGVLHAEDVALDILAAKLGTPLYVYSRAALRAAYDSYRLAIGERPVLVCYGMKAN 74 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+K A +G+G DIVS GEL+R LA +IVFSGVGK E+ AL++G+ CF Sbjct: 75 SNLAVLKEFARMGAGFDIVSGGELKRVLAVGGDPAKIVFSGVGKQAWEMREALEAGVKCF 134 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES +EL L++ A + GK A ++ RVNPD++A TH ISTG KE+KFGI I + + Y Sbjct: 135 NVESTAELHRLSKVAQATGKVARVSLRVNPDVDAQTHPYISTGLKENKFGIAIEEALAAY 194 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A++LPG+++ GVD HIGSQ+ I + A L DL ++ G I+H+D+GGGLGI Sbjct: 195 QTAASLPGLQVVGVDCHIGSQLTDISPYFDALDKLLDLIDRMAETGIRIEHLDLGGGLGI 254 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + Q G ++LEPGR LV + G+L+T V +K + + Sbjct: 255 RYTDEVPPSPKALLDEVFNRLQARGYGHLHLVLEPGRSLVGNAGLLLTTVQFLKHNDARN 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RPTLY AYH + +V AG+ D+VGP+CE+GD++A R +A Sbjct: 315 FAIVDAAMNDLLRPTLYQAYHGVRPVVPRAGEAR--VYDVVGPVCESGDWLAKERALA-I 371 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 D+L +E GAYG V +G YN+R E+MV+G+Q+H++R R + +L+ + ++P Sbjct: 372 EQDDVLALESAGAYGMVMAGNYNTRARAAEVMVDGAQYHVVRQRESLDDLLRGESTLP 429 >gi|239827592|ref|YP_002950216.1| diaminopimelate decarboxylase [Geobacillus sp. WCH70] gi|239807885|gb|ACS24950.1| diaminopimelate decarboxylase [Geobacillus sp. WCH70] Length = 439 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 133/421 (31%), Positives = 195/421 (46%), Gaps = 14/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQ 65 +G L V LA TP Y Y I + F AF V YA KA S+ Sbjct: 12 KGHLEIGGVDTVDLAKEYGTPLYIYDVALIRERARGFKEAFQKHGVKAQVAYASKAFSSI 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+++ G LD+VS GEL AL A P ERI F G K+ DE+ +AL++G+ C V+ Sbjct: 72 AMVQLAEEEGLSLDVVSGGELYTALQAGFPPERIHFHGNNKSRDELMMALENGVGCIVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL+ L Q + GKK I RV P + A+TH I TG+++ KFG ++ + A Sbjct: 132 NFYELELLEQLSKQYGKKTAILLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEALQ 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGI 242 A + + G+ HIGSQI + F A + + + +++GGG GI Sbjct: 192 KALSSLSFSVLGIHCHIGSQIFETTGFVLAAQKIFQKIAHWKETYGFIPTVVNLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y SD P S+Y +I +EPGR LV D G + + S K Sbjct: 252 RYTSDDDPIPVSEYVDQIVEEVKKQASEKNIPMPEIWIEPGRSLVGDAGTTIYSIGSRKD 311 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + + +D M+D +RP LYDA +E ++ I A I G CE+GD + + Sbjct: 312 VPNVRHYVAVDGGMSDNIRPALYDAKYEAVLANRVLDEKNEIVA-IAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + PGD L + TGAYG + YN + V + ++ R T+++L+ LD Sbjct: 371 LPLPKASPGDYLAVFCTGAYGYSMANNYNRIPRPAVVFVENGEAQLVVKRETYEDLVRLD 430 Query: 415 S 415 Sbjct: 431 V 431 >gi|297545173|ref|YP_003677475.1| diaminopimelate decarboxylase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842948|gb|ADH61464.1| diaminopimelate decarboxylase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 445 Score = 289 bits (740), Expect = 5e-76, Method: Composition-based stats. Identities = 133/434 (30%), Positives = 199/434 (45%), Gaps = 14/434 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQ 65 +G L LA TP Y + +N F N F V YA KA Sbjct: 11 KGHLEIGGCDTVTLAKKFGTPLYVIDEELLRQNCRAFYNGFKKDYPGNEVIYASKAFMTM 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ K + GLD+VS GEL AL A P E+I F G K+ +E+ +AL++ I V+ Sbjct: 71 AICKIIEEEKLGLDVVSGGELYTALKAGFPPEKIYFHGNNKSREELIMALENNIGRIIVD 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL LN A + K I R++P + A+TH+ + TG+ + KFG P+ ++ A Sbjct: 131 NWYELNMLNDLAKKMNKVPNIYIRISPGVEAHTHQYVKTGQIDSKFGFPLFNGDAIKAIE 190 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGI 242 YA TL V + G+ HIGSQI ES+ ++ + + L+ +D+GGG GI Sbjct: 191 YALTLENVNLVGLHSHIGSQIFDAESYKAEIDIMMNFLKLLKEFLGWEVGELDLGGGFGI 250 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKK 295 AY + P AS I Q II+EPGR ++ + G + V +IK Sbjct: 251 AYVEEDDPQPIEQIASEIMQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKD 310 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LY A ++ N A + I G +CE+GD + + Sbjct: 311 IPGVRKYVAVDGGMSDNIRTALYGAKYDAIV-ANKAKNIKSEKVSIAGKLCESGDMLIWD 369 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD+L + TGAY + YN ++V Q II R T+++LI D Sbjct: 370 ITLPKIEEGDILAVTCTGAYNYSMASNYNRLPRPAAVLVYNGQADIIVARETYEDLIRND 429 Query: 415 SIPAWLQKTPKQSS 428 IP L + + Sbjct: 430 VIPERLTNKKIKIA 443 >gi|289578961|ref|YP_003477588.1| diaminopimelate decarboxylase [Thermoanaerobacter italicus Ab9] gi|289528674|gb|ADD03026.1| diaminopimelate decarboxylase [Thermoanaerobacter italicus Ab9] Length = 445 Score = 289 bits (740), Expect = 5e-76, Method: Composition-based stats. Identities = 134/434 (30%), Positives = 201/434 (46%), Gaps = 14/434 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQ 65 +G L LA TP Y + +N F N F V YA KA Sbjct: 11 KGHLEIGGCDTVTLAKKFGTPLYVIDEELLRQNCRAFYNGFKKDYPGNEVIYASKAFMTM 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ K + GLD+VS GEL AL A PAE+I F G K+ +E+ +AL++ I V+ Sbjct: 71 AICKIIEEEKLGLDVVSGGELYTALKAGFPAEKIYFHGNNKSREELIMALENNIGRIIVD 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL LN A + K I R++P + A+TH+ + TG+ + KFG P+ ++ A Sbjct: 131 NWYELNMLNDLAKKMNKVPNIYIRISPGVEAHTHQYVKTGQIDSKFGFPLFNGDAIKAIE 190 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGI 242 YA TL V + G+ HIGSQI ES+ +++ + + L+ +D+GGG GI Sbjct: 191 YALTLENVNLVGLHSHIGSQIFDAESYKAEIEIMMNFLKLLKEFLGWEVGELDLGGGFGI 250 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKK 295 AY + P AS I Q II+EPGR ++ + G + V +IK Sbjct: 251 AYVEEDDPQPIEQIASEIMQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKD 310 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LY A ++ N A + I G +CE+GD + + Sbjct: 311 IPGVRKYVAVDGGMSDNIRTALYGAKYDAIV-ANKAKNIKSEKVSIAGKLCESGDMLIWD 369 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD+L + TGAY + YN ++V Q II R T+++LI D Sbjct: 370 ITLPKIEEGDILAVTCTGAYNYSMASNYNRLPRPAAVLVYNGQADIIVARETYEDLIRND 429 Query: 415 SIPAWLQKTPKQSS 428 IP L + + Sbjct: 430 VIPERLTNEKIKIA 443 >gi|21674193|ref|NP_662258.1| diaminopimelate decarboxylase [Chlorobium tepidum TLS] gi|21647356|gb|AAM72600.1| diaminopimelate decarboxylase [Chlorobium tepidum TLS] Length = 416 Score = 289 bits (740), Expect = 5e-76, Method: Composition-based stats. Identities = 159/414 (38%), Positives = 240/414 (57%), Gaps = 4/414 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 F + +G L E+V+L++LA TP + S ++ Y +F AF + CY++KA Sbjct: 5 HFFSFSDGILCCESVALDELARQFGTPLFVTSRQSLVSQYRSFEEAFASLPHFTCYSVKA 64 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N N AVI+TLA G G D+ S GEL RAL A VPA +I+ +GVGK+ EI L SG+ Sbjct: 65 NFNLAVIRTLAEEGCGCDVNSGGELYRALTAGVPANKIIMAGVGKSEAEIKYGLTSGVMM 124 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 ES SELK +N A LGK A + R+NP++ A TH I+TG ++KFGI + + Sbjct: 125 IKAESISELKAINSVAEHLGKVAQVGVRINPNVTAETHPYITTGDSKEKFGIDEAGLGEV 184 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 + TLP +++ G+DMHIGSQI E + A + L ++ + R G +I+ +D+GGG Sbjct: 185 FELFKTLPNLELHGLDMHIGSQIFDPEYYVAATQKLLEVLESARHLGFDIKWLDLGGGFP 244 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA-DKT 300 + Y P + +A + + +I EPGRF+ A+ ++VTK++ KK+ K Sbjct: 245 VTYDPQKPAPPITKFAEKLIPMLQDKGVTVIFEPGRFIAANASVIVTKILYRKKNQIGKE 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D M + +RP LY ++HE+ + + AD+VGPICE+ DF A +R I Sbjct: 305 FFIVDAGMTELIRPALYQSHHEVLSVKQHDRS---VVADVVGPICESSDFFARHRTIDDA 361 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 G+LL + +GAYGAV S YN RL E+MV+G + + R R T+++L++ + Sbjct: 362 PEGELLAVLSSGAYGAVMSSNYNGRLRPAEVMVDGDEVTLTRRRETYEQLVQNE 415 >gi|307322647|ref|ZP_07601981.1| diaminopimelate decarboxylase [Sinorhizobium meliloti AK83] gi|306891709|gb|EFN22561.1| diaminopimelate decarboxylase [Sinorhizobium meliloti AK83] Length = 447 Score = 289 bits (740), Expect = 5e-76, Method: Composition-based stats. Identities = 181/418 (43%), Positives = 261/418 (62%), Gaps = 2/418 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + Y G L E + +E +A V TPFYCYS + I + ++ ++ +VC+A+KA Sbjct: 19 DSLSYRNGKLFIEKLPVEDIAAEVWTPFYCYSASTIRNAFTLLADKLKPVNALVCFAVKA 78 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN +++K LA LG G+DIVS GEL RAL A V +IVFSGVGKT EI AL+ GI+ Sbjct: 79 NSNISILKLLADLGCGMDIVSGGELERALEAGVAPSKIVFSGVGKTRREIRRALEVGIHQ 138 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 NVES +EL+++ + A LG +AP+ FRVNPD++A+TH KISTGKK DKFGI I I L Sbjct: 139 LNVESPAELESIREVARDLGCRAPVVFRVNPDVDAHTHAKISTGKKGDKFGINIELIKEL 198 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 YA A+ P + ++G+ +HIGSQ+ + + A++ L L QLR+ ++ +D+GGGLG Sbjct: 199 YAKAAACPELDVAGLAVHIGSQLLNLSPYRAAYRRLASLVDQLRTLDLPVRRLDLGGGLG 258 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 I Y P +YA+++ + G L C++ +EPGR+LV G+LVT+V+++K++ Sbjct: 259 INYDFG-VGPDVGEYAAIVEETVGGLHCELTVEPGRWLVGPAGLLVTEVLNLKEAGGTVL 317 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 I+D AMND MRP LYDA H + + N G+ IVGP+CE+ D + + Sbjct: 318 AIVDAAMNDLMRPALYDAVHPVLPLQN-LGNCSAHPYQIVGPVCESSDVFGTYDALPPLQ 376 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 G + GAYGA + TYNSR LI E++V+ +F +IR R T Q+L+EL+ W Sbjct: 377 SGVRIAFGCAGAYGASMASTYNSRDLIAEVLVDADRFRLIRRRQTIQDLLELERATPW 434 >gi|11498406|ref|NP_069634.1| diaminopimelate decarboxylase (lysA) [Archaeoglobus fulgidus DSM 4304] gi|8134392|sp|O29458|DCDA_ARCFU RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|2649806|gb|AAB90438.1| diaminopimelate decarboxylase (lysA) [Archaeoglobus fulgidus DSM 4304] Length = 419 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 143/423 (33%), Positives = 225/423 (53%), Gaps = 12/423 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F +G L E V + ++ TP Y S +E+N + AF + YA+KAN+ Sbjct: 2 FSTSDGILTVEGVKVTEIVRETGTPVYVTSRALLERNLEAYKKAFSNEG--LLYAVKANN 59 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N A+++ +A G G D+ S+GEL A A + ++F+G K+ EI++ + +G+ Sbjct: 60 NLALMRIIASHGFGADVFSDGELYLASLAGFRKDMVLFNGNSKSRKEIEMGVTAGVKFSV 119 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 + EL+T+++ A +GK+ IAFRVNPD++ TH KI+TG +E KFGIP + Y Sbjct: 120 DSLD-ELRTISKIAKEVGKEVEIAFRVNPDVDPKTHPKIATGLRESKFGIPHEMVREAYE 178 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A L GV G+ HIGSQI + F A + D+ + G + +D+GGGLGI Sbjct: 179 MALKLDGVVPVGIHCHIGSQILDLSPFVHALNKVMDIAVDIEKLGVELSFVDMGGGLGID 238 Query: 244 YHSDHRPPSSSDYA------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 Y P+ D A + ++ LEPGR +V + +L+T+V ++K Sbjct: 239 Y-EGKGAPTPKDLASAILPEFEGRKADLTSDPQLWLEPGRSIVGNTTVLITRVNAVK-KG 296 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 K FV +D N +RP +Y +YH + + + +VGPICE+GD +A +RK+ Sbjct: 297 YKNFVAVDAGFNVLIRPAMYGSYHRVAVANKMDAEPEEV-YTVVGPICESGDVLARDRKL 355 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 GDL+ + GAYG V S YN R E++V+G ++ +IR + ++ +LIE +P Sbjct: 356 PKVEVGDLIAVFDAGAYGFVMSSQYNGRPRCAEVLVSGDRWDVIREKESYGDLIEKQRLP 415 Query: 418 AWL 420 WL Sbjct: 416 EWL 418 >gi|332977382|gb|EGK14160.1| diaminopimelate decarboxylase [Desmospora sp. 8437] Length = 444 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 133/425 (31%), Positives = 203/425 (47%), Gaps = 12/425 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSN 64 +G L +LAH TP Y T I + +F AF+ + YA KA S Sbjct: 11 EQGHLEIGGCDTVELAHRFGTPLYVMDETMIRRRIRSFVEAFEKTGLSYRMAYASKAFST 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + +A G LD+VS+GEL AL A P ERI F G KT+DE+ +AL +GI F Sbjct: 71 LAMCRLVAEEGLHLDVVSDGELYTALKAGFPPERIYFHGNNKTLDELVMALDAGIGRFVA 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ +EL L+Q A G++ + R P + A+TH I TG+++ KFG + A Sbjct: 131 DNFTELALLDQLARDRGRRVKVILRTTPGVEAHTHHYIQTGQEDSKFGFDLESGQVHQAL 190 Query: 185 ASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLG 241 L G++ G HIGSQI + + F A + + L + R G + +++GGG G Sbjct: 191 KQCLTSEGLEPEGFHCHIGSQIFESDGFRLAVRKMAALAAECRQSLGFRTRILNLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-----CKIILEPGRFLVADVGILVTKVISIKKS 296 I Y+ +P Y + I + +I LEPGR +V + G + +V ++K+ Sbjct: 251 IRYNEKDQPMPVDHYIAAIAEEVRQGFAGGELPQIWLEPGRSIVGEAGTTLYRVGTVKEI 310 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D MND RP LY A +E + N AG+ I G +CE+GD + + Sbjct: 311 PGLRKYVAVDGGMNDNPRPALYHASYE-ASLANRAGEEPAETVSIAGKLCESGDMLIWDI 369 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GDLL + TGAY + YN + V + + R T ++LI D Sbjct: 370 PLPRVNTGDLLAVSCTGAYNYSMANNYNRLRRPAVVFVRDGEASEVVRRETLEDLIRNDR 429 Query: 416 IPAWL 420 +P + Sbjct: 430 VPGRM 434 >gi|167647175|ref|YP_001684838.1| diaminopimelate decarboxylase [Caulobacter sp. K31] gi|167349605|gb|ABZ72340.1| diaminopimelate decarboxylase [Caulobacter sp. K31] Length = 432 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 184/421 (43%), Positives = 263/421 (62%), Gaps = 7/421 (1%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYA 58 + F+Y L E V L K+A V TP Y YS +E+++ F +A D ++ YA Sbjct: 13 NHFEYGPEGLACEGVPLAKIASQVGTPVYVYSRATLERHFTVFRDALLAAGVIDPLIAYA 72 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KANSN AV+K L +LG+G D VSEGE+RRALAA +P ERIVFSGVGK EI AL++G Sbjct: 73 VKANSNVAVLKVLGNLGAGADTVSEGEVRRALAAGIPGERIVFSGVGKKRGEIAFALRAG 132 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + NVESE EL + A LG KA +AFRVNPD+ A H KI+TGK E+KFG+ + Sbjct: 133 VAEINVESEPELNLIAAVAAELGVKAKVAFRVNPDVAAGGHAKIATGKSENKFGVSFAEA 192 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 LYA AS ++ GV HIGSQI + +AF +R L +QL G +++ +D+GG Sbjct: 193 ARLYANASNNANLEPIGVACHIGSQITDLSPMRQAFTKMRGLVEQLLGEGLHVERLDLGG 252 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA- 297 GLG+ Y PPS +D+A+++ + L K+ EPGR + A+ G+LV++VI + + Sbjct: 253 GLGVPYFDMPEPPSPADFAAMVGEVTQGLPVKLAFEPGRVIAANAGVLVSEVIHVHERPE 312 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 K F+++D AMND +RP +YDA+H+I ++ AG+ D+VGPICETGD +R + Sbjct: 313 GKRFLVIDAAMNDLIRPAMYDAFHDIRPLIKRAGE---TVYDVVGPICETGDTFTRDRAL 369 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 GDL+ GAYGA + YN+R L+PE++V+G F +IR R +++E++ D +P Sbjct: 370 PPLAAGDLVAFMSAGAYGAAMASEYNTRPLVPEVLVDGDTFAVIRARPSYEEILARDLVP 429 Query: 418 A 418 Sbjct: 430 D 430 >gi|328552744|gb|AEB23236.1| diaminopimelate decarboxylase [Bacillus amyloliquefaciens TA208] gi|328912458|gb|AEB64054.1| diaminopimelate decarboxylase [Bacillus amyloliquefaciens LL3] Length = 439 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 125/422 (29%), Positives = 196/422 (46%), Gaps = 15/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V LA TP Y Y I + +F AF + V YA KA S+ A Sbjct: 13 GHLEIGGVDALYLAEHYGTPLYVYDVALIRERAKSFKQAFIDADLKAQVAYASKAFSSVA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I+ G LD+VS GEL A++A PA+RI F G K+ +E+ +AL I C V++ Sbjct: 73 MIQLAEQEGLSLDVVSGGELFTAVSAGFPADRIHFHGNNKSREELQMALDHQIGCIVVDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--Y 184 E+ L + G+ + R+ P + A+TH I+TG+++ KFG +H A Sbjct: 133 FHEISLLAELCRKSGRAMDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQIEKAIEQ 192 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 +++ GV HIGSQI F A + + + R + + +++GGG GI Sbjct: 193 VLQSDHIRLLGVHCHIGSQIFDTAGFVLAAEKIFAKLNEWRESFGFVSEVLNLGGGFGIR 252 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P + Y I + + +I +EPGR LV D G + + S K+ Sbjct: 253 YTEEDEPLHPAVYVEKIIEAVKENAELYAFDIPEIWIEPGRSLVGDAGTTLYTIGSQKEV 312 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M+D +RP LY A +E N + I G CE+GD + + Sbjct: 313 PGTRKYAAVDGGMSDNIRPALYQAKYEAVS-ANRISEHHDTTVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GDLL + TGAYG + YN + V + H++ R T++++++LD Sbjct: 372 DLPEVKEGDLLAVFCTGAYGYSMANNYNRIPRPAVVFVEDGEAHLVIKRETYEDIVKLD- 430 Query: 416 IP 417 +P Sbjct: 431 LP 432 >gi|237756659|ref|ZP_04585168.1| diaminopimelate decarboxylase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691179|gb|EEP60278.1| diaminopimelate decarboxylase [Sulfurihydrogenibium yellowstonense SS-5] Length = 419 Score = 289 bits (739), Expect = 7e-76, Method: Composition-based stats. Identities = 181/413 (43%), Positives = 246/413 (59%), Gaps = 3/413 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + F Y E L+ E VS+ LA V TPF+ YS AI + AF DT++CYALKA Sbjct: 6 NYFGYIEKKLYCEEVSILNLASKVGTPFFVYSKKAILDKINQYKEAFKDYDTLICYALKA 65 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN +++K G G DIVS GEL +A A + +IV++GVGKT EI A+ I Sbjct: 66 NSNLSLLKIFEENGLGADIVSGGELYKAKKAGFSSNKIVYAGVGKTDFEISYAISENILS 125 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVES EL +N+ A KKA ++ RVNP+++ TH ISTG K+ KFGI I Q Sbjct: 126 FNVESFMELDVINEIASKQEKKANVSIRVNPNVDPKTHPYISTGLKKSKFGIDIDQALDA 185 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A L + + GV HIGSQI + F +A + + DL +L+ G ++ ID+GGGLG Sbjct: 186 YKKAVKLENLNVVGVHCHIGSQIMDVSVFREAAEKVVDLVFKLKKEGIELKFIDMGGGLG 245 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + YH D PP+ D A I K+I+EPGR L+A+ G L+TKVI +K +K F Sbjct: 246 VKYHPDDNPPTPKDLADAIIPVVKQTGLKLIIEPGRSLIAEAGALITKVIFLKDKQEKHF 305 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 VI+D MND +RP +Y+AYH ++N + ADIVGPICETGDF+AL+RKI Sbjct: 306 VIVDSGMNDLVRPAMYNAYHH---VLNVQEKDEEMIADIVGPICETGDFLALDRKIGKVE 362 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GDLL I GAYG+ S YN R + E++V+G F +I+ R ++ + + + Sbjct: 363 RGDLLAIMTAGAYGSSMSSNYNVRPIALEVLVDGPNFKVIKEREDYKHISKYE 415 >gi|153002477|ref|YP_001368158.1| diaminopimelate decarboxylase [Shewanella baltica OS185] gi|151367095|gb|ABS10095.1| diaminopimelate decarboxylase [Shewanella baltica OS185] Length = 414 Score = 289 bits (739), Expect = 7e-76, Method: Composition-based stats. Identities = 187/416 (44%), Positives = 257/416 (61%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +LHAE + LA TP Y YS +E+++ F+NA ++CYA+K Sbjct: 1 MDHFLYQQNALHAEGCQVAYLAQTYGTPLYIYSRATLERHWHAFNNAVADHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT E++ AL GIY Sbjct: 61 ANANLAVLNVLARLGSGFDIVSGGELARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A LGK AP++ R+NPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESSAELEQLNLVAGRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEI 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A LP +K+ GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 VFARAHALPHLKVKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y PP YA+ I G+ Q K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTY-DAETPPHPDVYAAAILARLGDRQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ I +V D DIVGP+CETGDF+ NR++AL Sbjct: 300 FAIVDGAMNDLIRPALYSAWQNIIPVV--PRDSEAYEFDIVGPVCETGDFLGKNRQLALA 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 LL + +GAYG + YN+R E+MV+G Q ++R R +L + + + Sbjct: 358 AGD-LLAVRSSGAYGFAMASNYNTRPRAAEVMVDGEQAFLVREREKLSQLWQGEQL 412 >gi|304315452|ref|YP_003850599.1| diaminopimelate decarboxylase [Methanothermobacter marburgensis str. Marburg] gi|302588911|gb|ADL59286.1| diaminopimelate decarboxylase [Methanothermobacter marburgensis str. Marburg] Length = 428 Score = 289 bits (739), Expect = 7e-76, Method: Composition-based stats. Identities = 140/426 (32%), Positives = 201/426 (47%), Gaps = 17/426 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQ 65 +G L +LA TP Y I +NY AF D V YA KAN+N Sbjct: 10 KGHLVIGGADAVELAEEYGTPLYVIDEMRIRENYRRLHRAFSRNYSDFQVFYACKANTNL 69 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 AV++ L GSG+D VS GE+ AL A ERI+++G DE+ AL++G+ Sbjct: 70 AVMRILEEEGSGIDAVSPGEIYIALMAGFDPERILYTGNNVRDDELQFALEAGVRINIDS 129 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 L+ + ++FRVNP + A H+ TG + KFGI + +Y+ A Sbjct: 130 RSQLLRLAE----MAPEGLEVSFRVNPLVGAGHHEHCITGGEMSKFGIMESEAPEVYSLA 185 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFK-LLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 L K G+ HIGS I E F A + L+ + G + ID GGGLGI Y Sbjct: 186 LDLGL-KPVGIHAHIGSGILDPEPFMLAVESLMDIAGRVHGETGIEFEFIDFGGGLGIPY 244 Query: 245 HSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 D P ++AS I F + + + LEPGR++V D L+T+V ++K+S Sbjct: 245 TPDEEPLDIDEFASRITGLFKDKLSDYGLGRPVMCLEPGRYIVGDASYLLTRVNTVKES- 303 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + F +D N +RP +Y +YH I P DI G +CE+GD A +R + Sbjct: 304 YRKFAGVDAGFNTLLRPAMYGSYHHILVADRPLA-GPSGKIDIAGNVCESGDLFARDRPM 362 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 + GD+L I GAY + YNSR E++V ++R R TF +L+ +P Sbjct: 363 SEVNEGDILAIMNAGAYSFSMASQYNSRPRPAEVLVRDGDAEVVRRRETFADLLAGQVVP 422 Query: 418 AWLQKT 423 A L K Sbjct: 423 ARLLKR 428 >gi|304412536|ref|ZP_07394142.1| diaminopimelate decarboxylase [Shewanella baltica OS183] gi|307307195|ref|ZP_07586933.1| diaminopimelate decarboxylase [Shewanella baltica BA175] gi|304349178|gb|EFM13590.1| diaminopimelate decarboxylase [Shewanella baltica OS183] gi|306910434|gb|EFN40865.1| diaminopimelate decarboxylase [Shewanella baltica BA175] Length = 414 Score = 289 bits (738), Expect = 7e-76, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 255/416 (61%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y + +L AE + LA TP Y YS +E+++ F+NA ++CYA+K Sbjct: 1 MDHFLYQQNALQAEGCQVADLAQTYGTPLYIYSRATLERHWHAFNNAVADHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT E++ AL GIY Sbjct: 61 ANANLAVLNVLARLGSGFDIVSGGELARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A LGK AP++ R+NPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESSAELEQLNLVAGRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEI 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A LP + + GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 VFARAHALPHLNVKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y PP YA+ I G+ Q K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTY-DAETPPHPDVYAAAILARLGDRQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ I +V D DIVGP+CETGDF+ NR++AL Sbjct: 300 FAIVDGAMNDLIRPALYSAWQNIIPVV--PRDSEAYEFDIVGPVCETGDFLGKNRQLALA 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 LL + +GAYG + YN+R E+MV+G Q ++R R +L + + + Sbjct: 358 AGD-LLAVRSSGAYGFAMASNYNTRPRAAEVMVDGEQAFLVREREKLSQLWQGEQL 412 >gi|332286107|ref|YP_004418018.1| diaminopimelate decarboxylase [Pusillimonas sp. T7-7] gi|330430060|gb|AEC21394.1| diaminopimelate decarboxylase [Pusillimonas sp. T7-7] Length = 420 Score = 289 bits (738), Expect = 7e-76, Method: Composition-based stats. Identities = 182/416 (43%), Positives = 253/416 (60%), Gaps = 5/416 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F++ G+LHAE++SL +LA TP Y YS A+ + + A +G D +VCY +KAN Sbjct: 6 HFQFKNGALHAEDISLAQLATTYGTPLYVYSRQALHDAWEAYRIASEGRDVLVCYGMKAN 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+ +LG+G DIVS GEL R LA ++VFSGVGK + E+ AL++G+ CF Sbjct: 66 SNLAVLNEFKNLGTGFDIVSGGELARVLAVGADPAKVVFSGVGKQVWEMQAALEAGVKCF 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL L Q A +GK AP++ RVNPD++A TH ISTG KE+KFGI I + +Y Sbjct: 126 NVESEAELTRLAQVAQDMGKVAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIEKAIEVY 185 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+TLP + I GVD HIGSQI ++ + A L L Q L S+ +++H+D+GGG+GI Sbjct: 186 QRAATLPSLSIVGVDCHIGSQITEVSPYLDALDKLIVLIQTLASHNIHLKHLDLGGGIGI 245 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + S +I+LEPGR LV + G+L+T+V +K S K Sbjct: 246 RYTDEQPLTPSDLLDKVFQTLGRHQLDHLQIVLEPGRSLVGNAGVLLTQVEYLKHSEAKN 305 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RPTLYDA+H + + DIVGPICE+GD++A +RK+ Sbjct: 306 FAIVDAAMNDLVRPTLYDAWHSVEAVKPRQQG--DTLYDIVGPICESGDWLARDRKL-TL 362 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL I GAY + YN+R E+MV+G H++RPR + L ++I Sbjct: 363 QQGDLLAIMSAGAYAFTMASQYNTRPRAAEVMVDGDTAHLVRPREPLESLYASETI 418 >gi|257453688|ref|ZP_05618975.1| diaminopimelate decarboxylase [Enhydrobacter aerosaccus SK60] gi|257448922|gb|EEV23878.1| diaminopimelate decarboxylase [Enhydrobacter aerosaccus SK60] Length = 435 Score = 289 bits (738), Expect = 7e-76, Method: Composition-based stats. Identities = 175/415 (42%), Positives = 242/415 (58%), Gaps = 3/415 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + Y +L + VSL +A TP Y YS AI Y + ++F ++ +CYA+KA Sbjct: 22 NCLSYDGNALMMDGVSLADIAKTFGTPTYVYSQQAILAAYKAYDDSFAEIEHQICYAVKA 81 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN AV+ LA G+G DIV+ GEL R LAA ++IVFSG+GKT ++I AL+ GI C Sbjct: 82 NSNLAVLNALAKAGAGFDIVTGGELARVLAAGGDPKKIVFSGLGKTAEDIRSALEVGIAC 141 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVESE+EL +N A L ++API+ RVNP+++A TH ISTG KE+KFGI + Sbjct: 142 FNVESEAELYRINAVAGKLQQQAPISLRVNPNVDAQTHPYISTGLKENKFGITHEDAPRI 201 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A LP +K+ G+D HIGSQ+ Q++ F A + ++ L G ++HID+GGGLG Sbjct: 202 YQIAHDLPHLKVVGIDCHIGSQLTQVQPFMDALDKVIEMIHALAKQGIALEHIDLGGGLG 261 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + Y + S +A L+ L + LEPGR +VA+ G+L+T+V +K + K F Sbjct: 262 VQYIDEDVA-SIQQFAQLLLPKLKTLGLTLYLEPGRSIVANAGVLLTRVDILKPTEHKNF 320 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 I+D AMND +RP LY + DIVG ICETGDF+A NR +AL Sbjct: 321 AIVDAAMNDLIRPALYQSEM-AVIPTQLNSPVEPKVWDIVGAICETGDFLAKNRVLALAD 379 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 D+L I GAYG V S YNSR E++V H+IR R T + L + + + Sbjct: 380 -NDILAITGAGAYGFVMSSNYNSRPRACEVLVKDGHAHVIRERETVESLWQNEKL 433 >gi|291612946|ref|YP_003523103.1| diaminopimelate decarboxylase [Sideroxydans lithotrophicus ES-1] gi|291583058|gb|ADE10716.1| diaminopimelate decarboxylase [Sideroxydans lithotrophicus ES-1] Length = 433 Score = 289 bits (738), Expect = 8e-76, Method: Composition-based stats. Identities = 178/430 (41%), Positives = 255/430 (59%), Gaps = 18/430 (4%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y + L+AE V+L ++A TP Y YS A+ +Y F+ A D ++CYA+KAN Sbjct: 4 YFHYQQDQLYAEKVALSEIAQRFGTPCYVYSRAALTDSYRQFAEALKSRDHLICYAVKAN 63 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN A++ A LG+G DIVS GEL+R LAA A ++VFSGVGK+ E+ AL++ I CF Sbjct: 64 SNLAILNLFARLGAGFDIVSGGELQRVLAAGGAASKVVFSGVGKSEAEMRQALEAEILCF 123 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A S+GK AP++ RVNPD++A TH ISTG K++KFG+ + LY Sbjct: 124 NVESAPELDRLNALAGSMGKVAPVSLRVNPDVDAKTHPYISTGLKQNKFGVAYTEALELY 183 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ +P ++++G+D HIGSQ+ + F A + + L +L + G ++H+D+GGGLGI Sbjct: 184 RKAAAMPNLRVTGMDCHIGSQLTETSPFIAAAEKVLALVDKLAAAGITLEHLDLGGGLGI 243 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + PPS ++Y + K+I+EPGR LV + G+L+T++ +K +K F Sbjct: 244 RYDDE-TPPSIAEYGKALLAVLQGRSEKLIVEPGRVLVGNAGVLLTRIEYLKHGEEKNFA 302 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAG----------------DRLHIHADIVGPICE 346 I+D AMND MRP LYDA+H I + ++VGPICE Sbjct: 303 IVDAAMNDLMRPALYDAWHAILPVQRRQNAPLSNSLPQAGERTSEKSNSQIYEVVGPICE 362 Query: 347 TGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 TGDFI R++A GD L + GAYG S YN+R E+MV+G+ H++R R T Sbjct: 363 TGDFIGHAREMA-VDKGDALAVMSAGAYGMSMSSNYNTRPRAAEVMVDGAVVHLVRERET 421 Query: 407 FQELIELDSI 416 ++L + I Sbjct: 422 VRQLYASEKI 431 >gi|224373130|ref|YP_002607502.1| diaminopimelate decarboxylase [Nautilia profundicola AmH] gi|223589760|gb|ACM93496.1| diaminopimelate decarboxylase [Nautilia profundicola AmH] Length = 400 Score = 289 bits (738), Expect = 8e-76, Method: Composition-based stats. Identities = 171/397 (43%), Positives = 233/397 (58%), Gaps = 3/397 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +KLA TP Y Y E + NAF G +++ YA+KANSN +VIK A LGSG Sbjct: 4 KKLADKYGTPLYVYDFHHFENQFNELKNAFKGRKSIISYAVKANSNLSVIKKFATLGSGA 63 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE++RAL A V +++FSGVGK DEI+ AL+ I NVESE+EL + A Sbjct: 64 DCVSIGEVKRALMAGVDRYKVIFSGVGKRDDEIEEALKLDILMINVESEAELNRVADIAE 123 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 LG A I+ RVNP+I+ TH ISTG E+KFG+ I +Y +A + G+ Sbjct: 124 KLGVVARISIRVNPNIDPKTHPYISTGLHENKFGVDIDTAKKMYLFAKNNSSLNPVGIHF 183 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ ++E +A +++ DL + L++ +I+ DVGGGLGI Y + DYA Sbjct: 184 HIGSQLTELEPIKEASQIVADLVRSLKAINIDIKFFDVGGGLGIKYKDEETI-KPYDYAQ 242 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L I+ EPGRFLV + G +T V+ K + DK FVI+D AMND +RP+LY+ Sbjct: 243 AILSTLSGLDVTIVCEPGRFLVGNGGWFLTSVLYEKVNGDKRFVIVDGAMNDLIRPSLYN 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH+I I + G+ A++VGPICE+GDF A + ++ GDL+ I GAYG Sbjct: 303 AYHKIEVITDKNGEISK--ANLVGPICESGDFFAKDIELPSTNHGDLVVIHSAGAYGFTM 360 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 S YN+R EI V + IIR R TF++LI + Sbjct: 361 SSNYNTRPRAAEIAVENGEDRIIRRRETFEDLIACEV 397 >gi|52549770|gb|AAU83619.1| diaminopimelate decarboxylase [uncultured archaeon GZfos32E4] Length = 425 Score = 289 bits (738), Expect = 8e-76, Method: Composition-based stats. Identities = 153/427 (35%), Positives = 236/427 (55%), Gaps = 13/427 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 K + + + +LA TP Y + N+ ++ NAF+ +DT + YA+KA Sbjct: 1 MKEEKDYFVFGGMDVVELAERYGTPLYVTDENKLRNNFKSYKNAFETTNIDTDIYYAVKA 60 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N N A++K LA G+G D+ S GEL A +PAE+I+F+G K+ D++ A++SG+ Sbjct: 61 NGNLALLKILASEGAGADVFSAGELELTKLAGIPAEKILFNGNSKSDDDLKEAVESGVR- 119 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 +V+S EL+ L+ A LG++ IA RVNPD++ + H KI+TG KE KFGIP H + + Sbjct: 120 VSVDSVDELRALSAVANELGREVEIAIRVNPDVSPDVHAKIATGLKESKFGIPFHDVIPV 179 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG-- 239 A LP V ++G+ HIGSQI I F +A + + L +++ G ++ +D+GGG Sbjct: 180 CEEAEKLPNVLLAGLHCHIGSQILDISVFGEATEKMMALVERMYERGMKLKFVDLGGGLG 239 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISI 293 +G P+ D A +I F N + +LEPGR +V IL+++V ++ Sbjct: 240 IGYRQEEKATAPTPEDLAEMILPLFENKIRDLGISLKLVLEPGRSIVGASTILLSRVNAV 299 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K++ K FV +D N +RP +YDAYHE+ N +R +VG +CE+GD +A Sbjct: 300 KRAN-KNFVAIDAGFNLLIRPVMYDAYHEVVV-ANKVNERASELYTVVGNVCESGDIMAK 357 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 +R + GDL+ I TGAYG S YN R E++V + +IR R + ++LI Sbjct: 358 DRMLPKVERGDLVAILDTGAYGFSMSSQYNGRPRCAEVLVCNGKADLIRSRESIEDLIRN 417 Query: 414 DSIPAWL 420 IPA L Sbjct: 418 QEIPARL 424 >gi|239814143|ref|YP_002943053.1| diaminopimelate decarboxylase [Variovorax paradoxus S110] gi|239800720|gb|ACS17787.1| diaminopimelate decarboxylase [Variovorax paradoxus S110] Length = 427 Score = 289 bits (738), Expect = 9e-76, Method: Composition-based stats. Identities = 166/416 (39%), Positives = 247/416 (59%), Gaps = 5/416 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 + +G+LH E + LE LA TP + YS + + F+G ++CYA+KAN Sbjct: 13 HIAHRDGALHVEGLGLEALAREHGTPLFVYSKQWMLDALAAYQRGFEGRSALICYAMKAN 72 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ V++ A G G DIVS GEL R LA RI+FSGVGKT E+ AL +GI CF Sbjct: 73 SSLGVLRVFAEAGCGFDIVSGGELARVLAVGADPARIIFSGVGKTRAEMRQALAAGIACF 132 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL LN+ A++ G++API+ R+NP+++ TH ISTG K +KFGI + Y Sbjct: 133 NVESEAELDVLNEVALAEGRRAPISIRINPNVDPKTHPYISTGLKGNKFGIAHDRAVEAY 192 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +A+ LPG+++ G+D HIGSQI + + A + DL + + + G I H+D GGGLGI Sbjct: 193 RHAARLPGLEVVGIDCHIGSQITEASPYLDACDRVLDLVEAIEAAGVPIHHLDFGGGLGI 252 Query: 243 AYHSDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y+ + P + + + L+ + G Q K+++EPGR LV + G+ +T+V+ K DK Sbjct: 253 DYNGEVPPKADALWQQLLARLDARGFGQRKLVIEPGRSLVGNAGVCLTEVLYTKPGEDKN 312 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y A+ +I + AGD D+VGP+CE+GD+I +R + + Sbjct: 313 FCIVDAAMNDLPRPAMYQAFQKIVPLRIRAGDAP--TYDVVGPVCESGDWIGRDRALNVV 370 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL + GAY + YN+R E++V+G +IR R T ++ + + I Sbjct: 371 S-GDLLAVLSAGAYCMSMASNYNTRGRAAEVLVSGRSATLIRRRETMEDQLRSERI 425 >gi|146294666|ref|YP_001185090.1| diaminopimelate decarboxylase [Shewanella putrefaciens CN-32] gi|145566356|gb|ABP77291.1| diaminopimelate decarboxylase [Shewanella putrefaciens CN-32] gi|319427902|gb|ADV55976.1| diaminopimelate decarboxylase [Shewanella putrefaciens 200] Length = 414 Score = 289 bits (738), Expect = 9e-76, Method: Composition-based stats. Identities = 184/416 (44%), Positives = 256/416 (61%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +LHAE + LA TP Y YS +E+++ F+NA ++CYA+K Sbjct: 1 MDHFLYHNNALHAEGCQVADLAKTYGTPLYIYSRATLERHWHAFNNAVMDHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT+ E++ AL GIY Sbjct: 61 ANANLAVLNVLARLGSGFDIVSGGELARVIEAGGSPAKVVFSGVGKTVAEMEQALNLGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A LGK AP++ R+NPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESSAELEQLNLVAGRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEI 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A LP +K+ GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 VFARAHALPHLKVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP YA+ + + GN + K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTYDDE-TPPHPDVYAAALLKRLGNRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ I + D DIVGP+CETGDF+ RK+AL Sbjct: 300 FAIVDGAMNDLIRPALYSAWQNIIPVA--PRDSEAYEFDIVGPVCETGDFLGKERKLALA 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 LL + +GAYG + YN+R E+MV+G ++R R +L + + + Sbjct: 358 AGD-LLAVRSSGAYGFAMASNYNTRPRAAEVMVDGEHAFLVREREKISQLWQGEQL 412 >gi|120600508|ref|YP_965082.1| diaminopimelate decarboxylase [Shewanella sp. W3-18-1] gi|120560601|gb|ABM26528.1| diaminopimelate decarboxylase [Shewanella sp. W3-18-1] Length = 414 Score = 289 bits (738), Expect = 9e-76, Method: Composition-based stats. Identities = 185/416 (44%), Positives = 257/416 (61%), Gaps = 4/416 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +LHAE + LA TP Y YS +E+++ F+NA ++CYA+K Sbjct: 1 MDHFLYHNNALHAEGCQVADLAKTYGTPLYIYSRATLERHWHAFNNAVMDHPHLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N AV+ LA LGSG DIVS GEL R + A ++VFSGVGKT+ E++ AL GIY Sbjct: 61 ANANLAVLNVLARLGSGFDIVSGGELARVIEAGGSPAKVVFSGVGKTVAEMEQALNLGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES +EL+ LN A LGK AP++ R+NPD++A TH ISTG KE+KFGI + + Sbjct: 121 CFNVESSAELEQLNLVAGRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEI 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++A A LP +K+ GVD HIGSQ+ +I+ F A + L +L G I+H DVGGGL Sbjct: 181 VFARAHALPHLKVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP YA+ + + GN + K+I EPGR + A+ GI VT+V+ +K+++DK Sbjct: 241 GVTYDDE-TPPHPDVYAAALLKRLGNRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKR 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND +RP LY A+ I +V D DIVGP+CETGDF+ RK+AL Sbjct: 300 FAIVDGAMNDLIRPALYSAWQNIIPVV--PRDSEAYEFDIVGPVCETGDFLGKERKLALA 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 LL + +GAYG + YN+R E+MV+G ++R R +L + + + Sbjct: 358 AGD-LLAVRSSGAYGFAMASNYNTRPRAAEVMVDGEHAFLVREREKISQLWQGEQL 412 >gi|226227158|ref|YP_002761264.1| diaminopimelate decarboxylase [Gemmatimonas aurantiaca T-27] gi|226090349|dbj|BAH38794.1| diaminopimelate decarboxylase [Gemmatimonas aurantiaca T-27] Length = 423 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 174/415 (41%), Positives = 241/415 (58%), Gaps = 4/415 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 S F +G LHAE V L +A V TP Y Y I Y ++AF+G+ + +A+KA Sbjct: 4 SGFDRRQGVLHAEGVPLPTIAAAVGTPAYVYCAGTIRARYERLAHAFEGVPHRIHFAMKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN AV++ L LG+G+DIVS GEL RA A +VFSGVGKT+ EI+ AL + Sbjct: 64 NSNLAVLRLLQELGAGVDIVSGGELYRAREAGFTGRDVVFSGVGKTVQEIEQALDDRVLL 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHS 180 NVESE+EL T++ A G APIA RVNP++ T H I TG+K KFGIP I Sbjct: 124 INVESEAELVTIDAVAARKGVVAPIAIRVNPEVTVETPHAYIRTGEKGQKFGIPRDDITR 183 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L + LP + + G+ MH+GSQI + A L + R+ GH+++++DVGGGL Sbjct: 184 LVSLIRELPHIALRGLGMHLGSQIGNADPLRDALPRLLVAVEAARAEGHDVRYLDVGGGL 243 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 + Y D R DYA ++ ++LEPGR++VA+ G L+T+V+ K +A K Sbjct: 244 SVPYEPDERDADVEDYAQIVRAAATETGLTLLLEPGRYIVAEAGTLLTQVLYRKHAAGKD 303 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F++ D M+D +RP LY AYH I I AD+VGPICE+GDF A NR++ Sbjct: 304 FIVTDAGMSDLIRPALYQAYH---AIEAVVDTTRTITADVVGPICESGDFFAKNRELPDV 360 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 G+LL I TGAYG + YNSR E++ +GS+F II R +++L+ L+ Sbjct: 361 SAGELLAIRTTGAYGYTMTSNYNSRPRAVEVLADGSRFAIITERERYEDLVRLER 415 >gi|52548561|gb|AAU82410.1| diaminopimelate decarboxylase [uncultured archaeon GZfos17C7] Length = 425 Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats. Identities = 152/427 (35%), Positives = 235/427 (55%), Gaps = 13/427 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 K + + + +LA TP Y + N+ ++ NAF+ +DT + YA+KA Sbjct: 1 MKEEKDYFVFGGMDVVELAERYGTPLYVTDENKLRNNFKSYKNAFETTNIDTDIYYAVKA 60 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N N A++K LA G+G D+ S GEL A +PAE+I+F+G K+ D++ A++SG+ Sbjct: 61 NGNLALLKILASEGAGADVFSAGELELTKLAGIPAEKILFNGNSKSDDDLKEAVESGVR- 119 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 +V+S EL+ L+ A LG++ IA RVNPD++ + H KI+TG KE KFGIP H + + Sbjct: 120 VSVDSVDELRALSAVANELGREVEIAIRVNPDVSPDVHAKIATGLKESKFGIPFHDVIPV 179 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG-- 239 A LP V ++G+ HIGSQI I F +A + + L +++ G ++ +D+GGG Sbjct: 180 CEEAEKLPNVLLAGLHCHIGSQILDISVFGEATEKMMALVERMYERGMKLKFVDLGGGLG 239 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISI 293 +G P+ D A +I F N + +LEPGR +V IL+++V ++ Sbjct: 240 IGYRQEEKATAPTPEDLAEMILPLFENKIRDLGISLKLVLEPGRSIVGASTILLSRVNAV 299 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K++ K FV +D N +RP +Y AYHE+ N +R +VG +CE+GD +A Sbjct: 300 KRAN-KNFVAIDAGFNLLIRPVMYGAYHEVVV-ANKVNERASELYTVVGNVCESGDIMAK 357 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 +R + GDL+ I TGAYG S YN R E++V + +IR R + ++LI Sbjct: 358 DRMLPKVERGDLVAILDTGAYGFSMSSQYNGRPRCAEVLVCNGKADLIRSRESIEDLIRN 417 Query: 414 DSIPAWL 420 IPA L Sbjct: 418 QEIPARL 424 >gi|138895872|ref|YP_001126325.1| diaminopimelate decarboxylase [Geobacillus thermodenitrificans NG80-2] gi|196248761|ref|ZP_03147461.1| diaminopimelate decarboxylase [Geobacillus sp. G11MC16] gi|134267385|gb|ABO67580.1| Diaminopimelate decarboxylase [Geobacillus thermodenitrificans NG80-2] gi|196211637|gb|EDY06396.1| diaminopimelate decarboxylase [Geobacillus sp. G11MC16] Length = 439 Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats. Identities = 132/424 (31%), Positives = 200/424 (47%), Gaps = 15/424 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 +G L V +LA + TP Y Y I F AF G+ V YA KA S+ Sbjct: 11 EKGHLEIGGVDTVELAKMYGTPLYIYDVALIRARARAFKEAFHLQGVRAQVAYASKAFSS 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+++ A G LD+VS GEL A+AA P+ERI F G K+ DE+ +AL+ GI C Sbjct: 71 IAMVQLAAEEGLSLDVVSGGELYTAIAAGFPSERIHFHGNNKSRDELAMALEHGIGCIVA 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--Y 182 ++ EL+ + Q A + G+ P+ RV P + A+TH I TG+++ KFG ++ + + Sbjct: 131 DNFYELELIEQLAAASGRVVPVLLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEAF 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLG 241 ++ GV HIGSQI + F A + + + ++ G I++GGG G Sbjct: 191 RRVMASSAFQLLGVHCHIGSQIFETTGFVLAAQKVFTKMAEWNKAYGFIPSVINLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y + P S Y + +I +EPGR LV D G + + S K Sbjct: 251 IRYTEEDDPIPVSAYVDCIVEEVKKQAKACQLPLPEIWIEPGRSLVGDAGTTIYTIGSRK 310 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + +D M+D +RP LY A +E G+R I G CE+GD + Sbjct: 311 DVPNIRTYLAVDGGMSDNIRPALYGAKYEAVLANRVLGER-TETVSIAGKCCESGDMLIW 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + +PGD L + TGAYG + YN + V ++ R T+++LI+ Sbjct: 370 DLALPETKPGDYLAVFCTGAYGYSMANNYNRLPRPAIVFVENGDAQLVVKRETYEDLIQH 429 Query: 414 DSIP 417 D +P Sbjct: 430 D-LP 432 >gi|187251103|ref|YP_001875585.1| diaminopimelate decarboxylase [Elusimicrobium minutum Pei191] gi|186971263|gb|ACC98248.1| Diaminopimelate decarboxylase [Elusimicrobium minutum Pei191] Length = 417 Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats. Identities = 186/419 (44%), Positives = 264/419 (63%), Gaps = 3/419 (0%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F Y LHAENV +E +A V TP Y YS + KN+ F NA + Y++KANS Sbjct: 2 FHYINCVLHAENVPVEIIAKEVGTPCYIYSNEILTKNFKDFDNALKKFKNTISYSIKANS 61 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N ++KT+A LG G D+VS GE+ AL A +PA +IVFSGVGKT E++ A+++ I N Sbjct: 62 NLGIVKTIASLGGGADVVSAGEMCIALKAGIPANKIVFSGVGKTKRELEEAIKNEILQIN 121 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 ESE+E+ T+N A+ LGKKA IA RVNPD++A TH KI+TGKKE+KFG+ LY Sbjct: 122 AESEAEVNTINHIALKLGKKANIALRVNPDVDAKTHVKITTGKKENKFGVDWDIAKDLYI 181 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 AS + G+ + G+ MHIGSQ+ ++ F AF + D+ +L G ++++D+GGGLGI Sbjct: 182 KASKMEGLNVVGIAMHIGSQLLDLDPFRLAFTKMADMVSELEKEGIILKNLDLGGGLGIN 241 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 Y+ PP+ YA +I + G II+EPGR ++ + IL+++VI K K F+I Sbjct: 242 YN-VELPPTKEAYAQVIEETLGKFNKHIIIEPGRSIIGEAAILISEVIFTKDMGSKHFII 300 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D MND MRP +YD++H I +V I ADIVGPICE+ D A +R I + G Sbjct: 301 VDAGMNDLMRPAMYDSWHTIVPVVK--KGLAPITADIVGPICESSDTFAKDRIIEPVKQG 358 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQK 422 +L+ + GAYG+ S YN R L+PE+MVN + F ++R R T++E++ +IP WL+K Sbjct: 359 ELVAMMSAGAYGSSMSSVYNFRPLVPEVMVNKNAFTVVRKRTTYEEMLSGQTIPDWLKK 417 >gi|209521076|ref|ZP_03269807.1| diaminopimelate decarboxylase [Burkholderia sp. H160] gi|209498495|gb|EDZ98619.1| diaminopimelate decarboxylase [Burkholderia sp. H160] Length = 420 Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats. Identities = 180/416 (43%), Positives = 245/416 (58%), Gaps = 5/416 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G LHAE VS LA TP Y YS A+ + ++ A G A+KAN Sbjct: 5 AFDYVDGVLHAEGVSAVSLAEQFGTPLYVYSRAALTAAWNAYAGACAGRRASAHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+ A LG+G DIVS GEL R LAA AE VFSGVGK E+ AL +G+ CF Sbjct: 65 SNLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKQASEMRDALAAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A +GKKAP++ RVNPD++A TH ISTG K +KFG+ + Y Sbjct: 125 NVESIPELDRLNAVAGEMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFDDARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ + +++ G+D HIGSQI ++ + A + +L +Q+ +G I+HIDVGGGLGI Sbjct: 185 QAAAAMANLEVVGIDCHIGSQITEVAPYLDAIDKVLELVEQIEQDGVTIRHIDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + + G+ ++ EPGR LV + G+L+T++ +K DK Sbjct: 245 TYDDETPPEIGEFVRTVLDRIEARGHAHREVYFEPGRSLVGNAGVLLTRLEFLKPGEDKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +YDAYH I +V D D+VGP+CE+GD++ R +A Sbjct: 305 FAIVDAAMNDLARPAMYDAYHAIEPVVKR--DVPAHVYDVVGPVCESGDWLGRERLLA-V 361 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL I GAYG V S YN+R E+MV+G+Q H++R R ++L ++I Sbjct: 362 EPGDLLAIRSAGAYGFVMSSNYNTRARAAEVMVDGTQAHVVRAREEVEQLFAGETI 417 >gi|52550218|gb|AAU84067.1| diaminopimelate decarboxylase [uncultured archaeon GZfos36D8] Length = 425 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 153/427 (35%), Positives = 236/427 (55%), Gaps = 13/427 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 K + + + +LA TP Y + N+ ++ NAF+ +DT + YA+KA Sbjct: 1 MKEEKDYFVFGGMDVVELAERYGTPLYVTDENKLRNNFKSYKNAFETTNIDTDIYYAVKA 60 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N N A++K LA G+G D+ S GEL A +PAE+I+F+G K+ D++ A++SG+ Sbjct: 61 NGNLALLKILASEGAGADVFSAGELELTKLAGIPAEKILFNGNSKSDDDLKEAVESGVR- 119 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 +V+S EL+ L+ A LG++ IA RVNPD++ + H KI+TG KE KFGIP H + + Sbjct: 120 VSVDSVDELRALSAVANELGREVEIAIRVNPDVSPDVHAKIATGLKESKFGIPFHDVIPV 179 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG-- 239 A LP V ++G+ HIGSQI I F +A + + L +++ G ++ +D+GGG Sbjct: 180 CEEAEKLPNVLLAGLHCHIGSQILDITVFGEATEKMMALVERVYERGMQLKFVDLGGGLG 239 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISI 293 +G P+ D A +I F N + +LEPGR +V IL+++V ++ Sbjct: 240 IGYRQEEKATAPTPEDLAEMILPLFENKIRDLGISLKLVLEPGRSIVGASTILLSRVNAV 299 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K++ K FV +D N +RP +YDAYHE+ N +R +VG +CE+GD +A Sbjct: 300 KRAN-KNFVAIDAGFNLLIRPVMYDAYHEVVV-ANKVNERASELYTVVGNVCESGDIMAK 357 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 +R + GDL+ I TGAYG S YN R E++V + +IR R + ++LI Sbjct: 358 DRMLPKVERGDLVAILDTGAYGFSMSSQYNGRPRCAEVLVCNGKADLIRSRESIEDLIRN 417 Query: 414 DSIPAWL 420 IPA L Sbjct: 418 QEIPARL 424 >gi|297616725|ref|YP_003701884.1| diaminopimelate decarboxylase [Syntrophothermus lipocalidus DSM 12680] gi|297144562|gb|ADI01319.1| diaminopimelate decarboxylase [Syntrophothermus lipocalidus DSM 12680] Length = 443 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 125/427 (29%), Positives = 201/427 (47%), Gaps = 13/427 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT-MVCYALKANSNQA 66 +G L + + L TP Y N F +AF +V YA K S A Sbjct: 6 QGHLEVGGIDVLDLVREFGTPLYVLDEEGFRANCRAFRDAFAKYGHSLVIYASKTLSCLA 65 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + G GLD+VS GEL AL A P ERI F G KT+DE+ +A++S + V++ Sbjct: 66 ACIIVEEEGLGLDVVSGGELYTALRASFPPERIFFHGNNKTLDELVMAVESRVGRVVVDN 125 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYAY 184 E++ L LG+ I R+ P + A+TH+ I TG+ + KFG + Sbjct: 126 FYEIELLENVCERLGRTQNILLRITPGVEAHTHEYIKTGQIDSKFGFTLANGDALKAVDT 185 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIA 243 +++ G+ HIGSQI +++++ A +++ DL ++++ ++ +++GGG GI Sbjct: 186 VCRTKNLRLMGLHCHIGSQIFEMDAYAHATEIMVDLLAEIKNRFGLELEELNMGGGFGIY 245 Query: 244 YHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 YHS P ++A + K+I+EPGR + GI + + S K+ Sbjct: 246 YHSGDEPRQPEEWAKAVMSTLRSKTEANALRMPKVIVEPGRAIAGPAGITLYTLGSYKEI 305 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D M D RP LY + +E N A + G CE+GD + + Sbjct: 306 PGVRKYVAVDGGMTDNPRPALYGSKYEAVI-ANRADREPDELVSVAGRCCESGDMLIWDI 364 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 K++ P+PGD+L + TGAY S YN ++V Q +I R ++++LI D Sbjct: 365 KLSHPQPGDILAVFATGAYNYSMSSNYNRVGRPAMVLVRDGQADLIVKRESYEDLIRNDV 424 Query: 416 IPAWLQK 422 IP L + Sbjct: 425 IPERLAR 431 >gi|52080853|ref|YP_079644.1| diaminopimelate decarboxylase [Bacillus licheniformis ATCC 14580] gi|52786225|ref|YP_092054.1| hypothetical protein BLi02486 [Bacillus licheniformis ATCC 14580] gi|319645190|ref|ZP_07999423.1| diaminopimelate decarboxylase [Bacillus sp. BT1B_CT2] gi|52004064|gb|AAU24006.1| diaminopimelate decarboxylase [Bacillus licheniformis ATCC 14580] gi|52348727|gb|AAU41361.1| LysA [Bacillus licheniformis ATCC 14580] gi|317392999|gb|EFV73793.1| diaminopimelate decarboxylase [Bacillus sp. BT1B_CT2] Length = 439 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 132/422 (31%), Positives = 200/422 (47%), Gaps = 15/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L V + LA TP Y Y I + F AF G+ V YA KA S+ A Sbjct: 13 GHLEIGGVDVLSLAERYGTPLYVYDVALIRERARKFQKAFKEAGLKAQVAYASKAFSSVA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I+ G LD+VS GEL A+ A PAERI F G K+ +E+ +AL+ I C +++ Sbjct: 73 MIQLAEQEGLSLDVVSGGELFTAIKAGFPAERIHFHGNNKSPEELAMALEHQIGCIVLDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ G+ + R+ P + A+TH I+TG+++ KFG +H A Sbjct: 133 FHEIAITEDLCKRSGQTVDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQVEQAIEQ 192 Query: 187 TLPG--VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 L K+ GV HIGSQI F A + + + R + +++GGG GI Sbjct: 193 VLRSSAFKLLGVHCHIGSQIFDTAGFVLAADKIFEKLAEWRETYSFIPEVLNLGGGFGIR 252 Query: 244 YHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P ++ Y ++FG +I +EPGR LV D G + + S K+ Sbjct: 253 YTKDDEPLAADVYVEKIIEAVKANAEHFGFDIPEIWIEPGRSLVGDAGTTLYTIGSQKEV 312 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D M+D +RP LY+A +E N D H A I G CE+GD + + Sbjct: 313 PGIRKYVAIDGGMSDNIRPALYEAKYEAAV-ANRMNDACHDTASIAGKCCESGDMLIWDL 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 +I R GD+L + TGAYG + YN + V + ++ R T++++++LD Sbjct: 372 EIPEVRDGDVLAVFCTGAYGYSMANNYNRIPRPAVVFVEDGEAQLVIQRETYEDIVKLD- 430 Query: 416 IP 417 +P Sbjct: 431 LP 432 >gi|298369659|ref|ZP_06980976.1| diaminopimelate decarboxylase [Neisseria sp. oral taxon 014 str. F0314] gi|298282216|gb|EFI23704.1| diaminopimelate decarboxylase [Neisseria sp. oral taxon 014 str. F0314] Length = 406 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 175/404 (43%), Positives = 245/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 LH E V +LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LHCEQVPYSRLAEEFGTPLYVYSQSALTEAFENYQTAFAALSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALHAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y +A+ Sbjct: 123 DRIQKVAERLGKTAYVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAARQSH 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L +L G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLIEACERILILVDRLADEGIVLEHLDLGGGVGIVYQDE-TV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + + + ADIVGPICETGDF+A R +A GDLL + Sbjct: 302 LMRPALYDAYHHIEAVE--PKNIPPLTADIVGPICETGDFLAKGRTLA-CEAGDLLVVRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++VNG++ +IR R T+ + + + Sbjct: 359 AGAYGASMASNYNTRNRAAEVLVNGNESKLIRRRETWAQQMANE 402 >gi|93005050|ref|YP_579487.1| diaminopimelate decarboxylase [Psychrobacter cryohalolentis K5] gi|92392728|gb|ABE74003.1| diaminopimelate decarboxylase [Psychrobacter cryohalolentis K5] Length = 443 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 178/417 (42%), Positives = 239/417 (57%), Gaps = 5/417 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 Y +LH E VS+ ++ TP Y YS AI Y ++++F + +CYA+KAN Sbjct: 26 ELHYQNNTLHMEQVSITEVVKHYGTPCYVYSKQAILDVYQAYTDSFASLTHQICYAVKAN 85 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+ LA G+G DIVS GEL R LAA A R+VFSGVGKT +I+ AL GI CF Sbjct: 86 SNLAVLGVLAQAGAGFDIVSRGELMRVLAAGGEATRVVFSGVGKTYSDIEYALNQGIGCF 145 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES SEL +N+ A L K API+ RVNPD++A TH ISTG K++KFGI +Y Sbjct: 146 NVESISELTLINEVAAQLDKSAPISLRVNPDVDAKTHPYISTGLKDNKFGIAHEDALVVY 205 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ L + I G+D HIGSQ+ ++ F A + +L LR G ++HID+GGGLG+ Sbjct: 206 QQAAKLSHIDIVGIDCHIGSQLTEVAPFVAALDKVIELVHSLRKAGIELRHIDLGGGLGV 265 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + P S ++A+ + L + EPGR +VA+ G+L+TKV +K + K F Sbjct: 266 RYIDE-TPVSIDEFANALLPKLSELGLTVFFEPGRSIVANAGVLLTKVDVLKPTEHKNFA 324 Query: 303 ILDVAMNDFMRPTLYDAYH---EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 I+D AMND +RP LY A N DIVG ICETGDF+A +R ++ Sbjct: 325 IVDAAMNDLIRPALYQAEMAVIPNVLPSNGINTESTEPWDIVGAICETGDFLAKDRLLS- 383 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD+L I GAYG S YNSR E+MV + +IR R T + L + + Sbjct: 384 LSTGDILAITGAGAYGFTMSSNYNSRPRASEVMVADDRHQLIRKRETVEALYADEVL 440 >gi|217969261|ref|YP_002354495.1| diaminopimelate decarboxylase [Thauera sp. MZ1T] gi|217506588|gb|ACK53599.1| diaminopimelate decarboxylase [Thauera sp. MZ1T] Length = 423 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 176/412 (42%), Positives = 247/412 (59%), Gaps = 4/412 (0%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G+L E + L ++A TP Y YS A+ + + +A G +VCYA+KANSN Sbjct: 16 RDGALWLEELPLAEIAARFGTPTYVYSRAALAAAFAAWQDALAGRRALVCYAVKANSNLG 75 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 ++ A LG+G DIVS GEL R LAA A+++VFSGVGKT E+ AL +GI CFNVES Sbjct: 76 ILSVFARLGAGFDIVSGGELARVLAAGGRADKVVFSGVGKTRAEMRQALLAGIRCFNVES 135 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 +EL+ L+ A LG +AP++ RVNPD++ TH ISTG K +KFG+ ++Y A+ Sbjct: 136 AAELEHLDAVAGELGVRAPVSLRVNPDVDPKTHPYISTGLKGNKFGVAFADAPAIYRRAA 195 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 LP + I+GV HIGSQ+ +A + LRDL + L ++G ++HID+GGGLGI Y Sbjct: 196 ALPNLHITGVACHIGSQLLDRAPIAEAAQKLRDLVEHLAADGMALEHIDLGGGLGIRYRD 255 Query: 247 DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 + PP + A L+ + G + EPGR LV + G+L+T++ +K K F I+D Sbjct: 256 ETPPPVAEYLAPLLEVFAGRAEELC-FEPGRSLVGNAGLLLTRIEYLKPGETKNFAIVDA 314 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 AMND RP LYDA+HE+ + D+VGPICE+GDF+A R +A GDLL Sbjct: 315 AMNDLARPALYDAWHEVVEVAARTHAPS--TYDVVGPICESGDFLARERSLA-VAEGDLL 371 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 I GAYG + YN+R EI+V+G+ H++R R T +EL + P Sbjct: 372 AILSAGAYGMTMASNYNTRPRAAEILVDGASAHVVRERETVEELFARERTPG 423 >gi|332524336|ref|ZP_08400557.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2] gi|332107666|gb|EGJ08890.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2] Length = 424 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 170/411 (41%), Positives = 253/411 (61%), Gaps = 4/411 (0%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G L E SL LA TP Y YS TA+ + A +G+ ++CYA+KANSN AV Sbjct: 14 DGELRLEGHSLADLARRHGTPLYVYSRTAMLDALAGYQRALEGLPHLICYAIKANSNLAV 73 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++T A G G DIVS GEL R LAA +IVFSGVGKT E+ AL+ G++CFNVES Sbjct: 74 LQTFARAGCGFDIVSGGELERVLAAGAEPSKIVFSGVGKTAAEMRRALEVGVHCFNVESL 133 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 EL+ L + A ++G++AP++ RVNPD++A TH ISTG K++KFGIP + ++Y A+ Sbjct: 134 GELERLAEVAAAMGRRAPVSLRVNPDVDAGTHPYISTGLKDNKFGIPHDEALAVYRRAAA 193 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 LP +++ G+D HIGSQI Q+E + A + DL + + + G + H+DVGGGLGI Y + Sbjct: 194 LPSLQVVGIDCHIGSQITQLEPYLDALGRVLDLVEAVEAEGIALAHVDVGGGLGITYTDE 253 Query: 248 HRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 P + + + G+ ++++EPGR LV + G+L+ +V +K K F I+D Sbjct: 254 APPSPETLVRGLADLMRARGHGHRQLLVEPGRSLVGNAGVLLAEVQYLKPGETKNFCIVD 313 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 AMND +RP +Y+A+ I P D + D+VGP+CE+GD++ +R++A PGD+ Sbjct: 314 AAMNDLVRPAMYEAWMAIEPC-RPGADTVAATWDVVGPVCESGDWLGRDRRLA-VAPGDI 371 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + + GAYG +G YNSR EI+++G H++R R + L L+ + Sbjct: 372 VAVLSAGAYGMAMAGNYNSRPRAAEILLDGDAVHVVREREDTRALFALERL 422 >gi|308174124|ref|YP_003920829.1| diaminopimelate decarboxylase [Bacillus amyloliquefaciens DSM 7] gi|307606988|emb|CBI43359.1| diaminopimelate decarboxylase [Bacillus amyloliquefaciens DSM 7] Length = 439 Score = 288 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 124/422 (29%), Positives = 195/422 (46%), Gaps = 15/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V L TP Y Y I + +F AF + V YA KA S+ A Sbjct: 13 GHLEIGGVDALYLVEHYGTPLYVYDVALIRERAKSFKQAFIDADLKAQVAYASKAFSSVA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I+ G LD+VS GEL A++A PA+RI F G K+ +E+ +AL I C V++ Sbjct: 73 MIQLAEQEGLSLDVVSGGELFTAVSAGFPADRIHFHGNNKSREELQMALDHQIGCIVVDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--Y 184 E+ L + G+ + R+ P + A+TH I+TG+++ KFG +H A Sbjct: 133 FHEISLLAELCRKSGRAMDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQIEKAIEQ 192 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 +++ GV HIGSQI F A + + + R + + +++GGG GI Sbjct: 193 VLQSDHIRLLGVHCHIGSQIFDTAGFVLAAEKIFAKLNEWRESFGFVSEVLNLGGGFGIR 252 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P + Y I + + +I +EPGR LV D G + + S K+ Sbjct: 253 YTEEDEPLHPAVYVEKIIEAVKENAELYAFDIPEIWIEPGRSLVGDAGTTLYTIGSQKEV 312 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M+D +RP LY A +E N + I G CE+GD + + Sbjct: 313 PGTRKYAAVDGGMSDNIRPALYQAKYEAVS-ANRISEHHDTTVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GDLL + TGAYG + YN + V + H++ R T++++++LD Sbjct: 372 DLPEVKEGDLLAVFCTGAYGYSMANNYNRIPRPAVVFVEDGEAHLVIKRETYEDIVKLD- 430 Query: 416 IP 417 +P Sbjct: 431 LP 432 >gi|237747395|ref|ZP_04577875.1| diaminopimelate decarboxylase [Oxalobacter formigenes HOxBLS] gi|229378746|gb|EEO28837.1| diaminopimelate decarboxylase [Oxalobacter formigenes HOxBLS] Length = 431 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 170/426 (39%), Positives = 249/426 (58%), Gaps = 15/426 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT-----MVCY 57 F Y L + V L+KLA TP Y YS TA+ +++ +++ +T +VCY Sbjct: 7 HFIYQNDVLTVDGVPLDKLAAQFGTPLYVYSKTALIEHFHQYADTCKRHETDDIHSLVCY 66 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 ++K+NSN A++ L G+G DIVS GEL R +AA +++FSGVGKT +EI LAL+ Sbjct: 67 SVKSNSNLAILNILGREGAGFDIVSGGELLRVIAAGCDPRKVIFSGVGKTTEEISLALKH 126 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 I CFNVES +EL+ +N+ A +GKKA I+FRVNPD++ TH ISTG KE+KFGIP + Sbjct: 127 DILCFNVESFAELQRINRIASEMGKKARISFRVNPDVDPKTHPYISTGLKENKFGIPFEE 186 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 S Y AS + + ++G+D HIGSQ+ +A L L QL +QHID+G Sbjct: 187 ALSCYEQASKMTHIDVTGIDCHIGSQLLDDSPLLEALDKLIGLYDQLAQRNIELQHIDIG 246 Query: 238 GGLGIAYH-------SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG+GI Y ++ + + I+ EPGR + + G+L+T+V Sbjct: 247 GGIGITYDNEEPVAVPEYLSRLFRKIGEWKNANYPGKPLAIMFEPGRSISGNAGLLLTQV 306 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 +K ++DK F I+D AMND MRP+LY+A+H + +V G L D+VGP+CE+GD+ Sbjct: 307 QYLKTNSDKHFAIVDAAMNDLMRPSLYEAWHTVLPVVKRNGSAL--TYDVVGPVCESGDW 364 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 +A RK++ D L + GAYG + YN+R E++V+ Q H+IR R +EL Sbjct: 365 LARQRKLS-IEADDYLAVMSAGAYGMAMASNYNTRGRAAEVLVDNGQVHLIRQRERAEEL 423 Query: 411 IELDSI 416 L++I Sbjct: 424 YALETI 429 >gi|289192693|ref|YP_003458634.1| diaminopimelate decarboxylase [Methanocaldococcus sp. FS406-22] gi|288939143|gb|ADC69898.1| diaminopimelate decarboxylase [Methanocaldococcus sp. FS406-22] Length = 435 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 152/429 (35%), Positives = 230/429 (53%), Gaps = 16/429 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD------TMVCYA 58 + +G + + +LA TP Y S I+ NY + AF + +V YA Sbjct: 9 EIKDGRMFIDGYDAIELAEKFGTPLYVMSEEQIKINYNRYVEAFKRYEEETGKEFIVAYA 68 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KAN+N A+ + LA LG G D+VS GEL A + VP+++IVF+G KT +EI + +++ Sbjct: 69 YKANANLAITRLLAKLGCGADVVSGGELYIAKLSGVPSDKIVFNGNCKTKEEIIMGIEAK 128 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I FNV+S SEL +N+ A +G+ A +AFR+NP+++ TH KISTG K++KFG+ + Sbjct: 129 IRAFNVDSISELILINETAKEIGEIANVAFRINPNVDPKTHPKISTGLKKNKFGLDVESG 188 Query: 179 HSL--YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 ++ A + VK+ GV HIGSQ+ I F + + + D +L+ G I+ +++ Sbjct: 189 IAMKAIKMALEMENVKVVGVHCHIGSQLTDISPFVEETRKVMDFVVELKKEGIEIEDVNL 248 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNL-----QCKIILEPGRFLVADVGILVTKVI 291 GGGLGI Y+ D P+ D A I +ILEPGR LVA G L+ KV Sbjct: 249 GGGLGIPYYKDKEIPTQKDLADAIINTMLQYQDKVEMPNLILEPGRSLVATAGYLLGKVH 308 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK++ +V++D MND MRP +Y+AYH I N + G +CE+ D Sbjct: 309 HIKETPVTKWVMIDAGMNDMMRPAMYEAYHHII---NCKVKDEKEVVSVAGGLCESSDVF 365 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 +R++ GD+L I GAYG + YN+R ++ + +IR R T+ +LI Sbjct: 366 GRDRELDKVEVGDILAIFDVGAYGISMANNYNARGRPRMVLTSKKGVFLIRERETYADLI 425 Query: 412 ELDSIPAWL 420 D +P L Sbjct: 426 AKDIVPPHL 434 >gi|189499930|ref|YP_001959400.1| diaminopimelate decarboxylase [Chlorobium phaeobacteroides BS1] gi|189495371|gb|ACE03919.1| diaminopimelate decarboxylase [Chlorobium phaeobacteroides BS1] Length = 416 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 158/415 (38%), Positives = 234/415 (56%), Gaps = 4/415 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + F + G L E VSLE+LA TP + S ++ Y +F AF +D + CY++KA Sbjct: 5 NLFPFSNGVLCCEGVSLERLAEKYGTPLFVTSRNSLVNQYRSFEKAFALLDHLTCYSVKA 64 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N N +I+TLA G G D+ S GEL RAL A +I+ +GVGK+ EI+ A+ SGI Sbjct: 65 NFNLHIIRTLAAEGCGFDVNSGGELYRALQAGADPAKIIMAGVGKSAAEIEYAISSGILM 124 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 ES SEL+ +++ A LG +A + RVNP++ A TH I+TG ++KFGI + + Sbjct: 125 LKTESLSELRLIDEIAGRLGVQASVGIRVNPNVTAETHPYITTGDSKEKFGIDETDLAQV 184 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 ++ + V ++ +DMHIGSQI E +H A + L D+ RS G I++ D+GGG Sbjct: 185 FSLIGAMDHVNLTALDMHIGSQIFDTEFYHAASEKLLDVLAVARSAGFAIRYFDIGGGFP 244 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI-KKSADKT 300 + Y +A + I+ EPGRF+ A+ +LVT+V+ + A K Sbjct: 245 VTYDPQKPATPIGHFAEKLIPLLEKAGTTILFEPGRFIAANSTVLVTRVLYRKRNHAGKE 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI+D M + +RP LY ++HEI + + AD+VGP+CE+GDF A R I Sbjct: 305 FVIVDAGMTELIRPALYQSHHEIVAVKPHDS---MMVADVVGPVCESGDFFARARTIDAV 361 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 G+LL + +GAYG+V YN RL E+MV+G +IR R TF++LI+ + Sbjct: 362 GEGELLAVLSSGAYGSVMGNNYNGRLRPAEVMVDGDDATLIRKRDTFEQLIQNEV 416 >gi|167838175|ref|ZP_02465034.1| diaminopimelate decarboxylase [Burkholderia thailandensis MSMB43] Length = 423 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 180/419 (42%), Positives = 245/419 (58%), Gaps = 5/419 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G+LHAE VS LA TP + YS A+ Y ++ A G + A+KAN Sbjct: 5 AFDYVDGTLHAERVSAADLAERFGTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN V+ A LG+G DIVS GEL R LAA A+ +VFSGVGK DE+ +AL++G+ CF Sbjct: 65 SNLGVLNVFARLGAGFDIVSGGELARVLAAGGRAQNVVFSGVGKNADEMRIALEAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A SLGK+AP++ RVNPD++ TH ISTG K +KFGI + Y Sbjct: 125 NVESIPELDRLNAVAASLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LP +++ G+D HIGSQI ++ + A L DL +Q+ ++G I H+DVGGGLGI Sbjct: 185 RAAAALPNLEVVGIDCHIGSQITELSPYLDAIDKLLDLVEQIEADGVKIGHVDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G+ +I EPGR L + GIL+T+V +K+ +K Sbjct: 245 TYDDETPPDIGAYVRAVLERIDARGHGHREIWFEPGRSLTGNAGILLTRVEFLKQGEEKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y V P D D+VGP+CE+GD++ R +A Sbjct: 305 FAIVDAAMNDLARPAMYQ-AFHAIEPVTPRMDVAAAVYDVVGPVCESGDWLGRGRSLA-I 362 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 PGDLL I GAYG S YN+R E++V+G+ H++RPR T + L E + +P Sbjct: 363 APGDLLAIRSAGAYGFTMSSNYNTRPRAAEVIVDGANAHLVRPRETVESLFEREAVLPD 421 >gi|282163529|ref|YP_003355914.1| diaminopimelate decarboxylase [Methanocella paludicola SANAE] gi|282155843|dbj|BAI60931.1| diaminopimelate decarboxylase [Methanocella paludicola SANAE] Length = 426 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 147/424 (34%), Positives = 236/424 (55%), Gaps = 12/424 (2%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 + +G LH V +LA TP Y + + NY F+ AF G+ + +A K+N Sbjct: 8 HLEVKKGHLHIGGVDTVQLAQQYGTPLYVTNEDRLRDNYRRFAKAFKGVP--LFFAAKSN 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 ++ V + LA G+G D S+GE+ A A +PA++I+F+G KT E+ A+++G+ Sbjct: 66 NSLVVQRILAQEGAGADAFSDGEIYLARLAGIPAQKILFTGNSKTDAELAYAVEAGVM-V 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 +++S EL +L+ A + GK +AFRVNP+I+ +TH K++TG K KFGIP +I Y Sbjct: 125 SIDSHDELISLSHIAKAHGKTMNVAFRVNPEISGDTHPKLATGLKISKFGIPRQEIVDTY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 AS LPG+ G+ HIGSQI ++ + + + DL Q+ +++ +D+GGG GI Sbjct: 185 KEASKLPGINPVGIHCHIGSQILEVSPYVETVNRMMDLVAQIS-KFVDLEFVDIGGGFGI 243 Query: 243 AYHSDHRPPSSSDYA------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D + P+ DYA + ++ +EPGR++VAD +L+T V ++K Sbjct: 244 PYQKDVKAPTPQDYAKAILPLYRKRCKEIGISPELHIEPGRYIVADTTVLLTHVNTVK-K 302 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 A TF+ +D N +RP +YD+YHE+ N A + + GPICE+GD +A +RK Sbjct: 303 AYSTFIGVDAGFNTLIRPAMYDSYHEVVV-ANKADKKSASTYTVAGPICESGDILARDRK 361 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + + D++ + GAYG S Y +R E++++ Q +IR R T+ +LI+ I Sbjct: 362 LPQVKKDDIIALLDAGAYGFCMSSQYLARPRSAEVLIHDGQAELIRKRETYDDLIQNQLI 421 Query: 417 PAWL 420 P L Sbjct: 422 PGRL 425 >gi|296109111|ref|YP_003616060.1| diaminopimelate decarboxylase [Methanocaldococcus infernus ME] gi|295433925|gb|ADG13096.1| diaminopimelate decarboxylase [Methanocaldococcus infernus ME] Length = 431 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 158/425 (37%), Positives = 228/425 (53%), Gaps = 14/425 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD------TMVCYALK 60 + ++ + + +LA TP Y S I+ N+ + AF + ++ YA K Sbjct: 9 IKDRIYIDGYDVIELAERFGTPLYIMSEEQIKINFNRYVEAFKRYEEETGKEFILAYAYK 68 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN A+ K LA LGSG D+VS GEL A + VP+E+IVF+G K +EI + ++S I Sbjct: 69 ANSNLAITKLLAKLGSGADVVSGGELYIAKLSQVPSEKIVFNGNCKIREEIIMGIESEIR 128 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNV+S SEL +N+ A LGK+A +AFR+NPD++ TH KISTG K++KFG+ Sbjct: 129 AFNVDSISELIMINEIAKELGKEANVAFRINPDVDPKTHPKISTGLKKNKFGLDTKTALK 188 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 A + + G+ HIGSQ+ + F +A K + + +L+ ++ +++GGGL Sbjct: 189 AIDMALKMENINFVGLHCHIGSQLTDVSPFVEATKKMMEFILKLKEKNIEVRDLNLGGGL 248 Query: 241 GIAYHSDHRPPSSSDYASLI-----HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 GI YH D P+ DYA+ I +I+EPGR +VA G LV KV IK+ Sbjct: 249 GIPYHKDKEIPTVKDYANSIIETILKFKDKVEMPNLIIEPGRSIVATAGYLVGKVWHIKE 308 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +V++D MND MRP +YDAYH + N + G +CE+ D +R Sbjct: 309 TEVTKWVMIDAGMNDLMRPAMYDAYHHME---NAKVKGEKEKVSVAGGLCESSDVFGRDR 365 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 +I GD + I GAYG S YNSR I+ + +IIR R TF +LI D Sbjct: 366 EIDKVEVGDYIVIFDAGAYGISMSNNYNSRGRPRMILTSKKGVYIIRERETFSDLIAKDI 425 Query: 416 IPAWL 420 IP L Sbjct: 426 IPPHL 430 >gi|261393306|emb|CAX50938.1| diaminopimelate decarboxylase (DAP decarboxylase) [Neisseria meningitidis 8013] Length = 406 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 175/404 (43%), Positives = 246/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y A+ P Sbjct: 123 DRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRRAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLIEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDE-DV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLMGTRRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G+++ +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVDGNEYRLIRRRETLEQQMANE 402 >gi|91786679|ref|YP_547631.1| diaminopimelate decarboxylase [Polaromonas sp. JS666] gi|91695904|gb|ABE42733.1| diaminopimelate decarboxylase [Polaromonas sp. JS666] Length = 427 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 168/416 (40%), Positives = 244/416 (58%), Gaps = 4/416 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y L AE++ + +LA + TP + YS A+ + F G D +CYA+KAN Sbjct: 11 HFAYRGNDLFAEDLMVSELASLHGTPLFVYSKAAMLSALAAYQRGFAGRDVQICYAMKAN 70 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ V++ A G G DIVS GEL R LAA A +I+FSGVGKT E+ AL +GI CF Sbjct: 71 SSLGVLQVFAGAGCGFDIVSGGELERVLAAGGQANKIIFSGVGKTRAEMRQALAAGIGCF 130 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL L+ A ++ +AP++ RVNP+++ TH ISTG K +KFG+ +Y Sbjct: 131 NVESEAELDVLSGVAAAMNLRAPVSIRVNPNVDPKTHPYISTGLKGNKFGVAHEDALRIY 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +A+ LPG++++G+D HIGSQI + + A + DL + S G ++HID GGGLGI Sbjct: 191 QHAAALPGLQVAGIDCHIGSQITETTPYLDAMDRVLDLVASIESAGIELEHIDFGGGLGI 250 Query: 243 AYHSDHRPPSSSDYASLIH--QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y+ D P + + L+ G K+++EPGR LV + GI +T+V+ +K K Sbjct: 251 NYNGDTPPEADVLWRQLLAKLDARGYGSKKLMIEPGRSLVGNAGICLTEVLYLKPGEQKN 310 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y A+H I V G D+VGP+CE+GD+I +R +A Sbjct: 311 FCIIDAAMNDLPRPAMYQAFHAIVPAVA-GGPAPATTYDVVGPVCESGDWIGRDRPLA-V 368 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD+L + GAY + YN+R E++V+GSQ H+IR R Q+ + + + Sbjct: 369 NAGDVLAVLSAGAYCMSMASNYNTRGRAAEVLVDGSQAHLIRRREDAQDQMRHEQL 424 >gi|125973201|ref|YP_001037111.1| diaminopimelate decarboxylase [Clostridium thermocellum ATCC 27405] gi|256004005|ref|ZP_05428991.1| diaminopimelate decarboxylase [Clostridium thermocellum DSM 2360] gi|281417400|ref|ZP_06248420.1| diaminopimelate decarboxylase [Clostridium thermocellum JW20] gi|125713426|gb|ABN51918.1| diaminopimelate decarboxylase [Clostridium thermocellum ATCC 27405] gi|255992133|gb|EEU02229.1| diaminopimelate decarboxylase [Clostridium thermocellum DSM 2360] gi|281408802|gb|EFB39060.1| diaminopimelate decarboxylase [Clostridium thermocellum JW20] gi|316940568|gb|ADU74602.1| diaminopimelate decarboxylase [Clostridium thermocellum DSM 1313] Length = 437 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 128/427 (29%), Positives = 199/427 (46%), Gaps = 15/427 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 + L L + TP Y + I +N + NA D + +V YA KA Sbjct: 12 KNHLEIGGCDCVDLVNNFGTPLYVMDESLIRENCRIYKNALDKYYNGNGLVLYASKAFCT 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ K + G GLD+VS GEL A+ A P E++ F G KTIDE++LA+ + + V Sbjct: 72 MAMCKIVQQEGLGLDVVSGGELYTAIKAGFPMEKVYFHGNNKTIDELELAIDNNVRRIVV 131 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL +N+ A GK I+FR+ P I+A+TH I TG+ + KFG+ + ++ Sbjct: 132 DNRQELLHVNRIAAEKGKTVNISFRIKPGIDAHTHDFIRTGQIDSKFGVALENGEAMEII 191 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI-DVGGGLG 241 A L VK+ G+ HIGSQI ++ F +A +++ +++ ++GGG G Sbjct: 192 GEAVKLSNVKVVGLHCHIGSQIFELAPFEEAARVMLTFIAKIKEELGIEIEELNLGGGFG 251 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK 294 I Y D P Y + + ++ I++EPGR +VA GI + ++ +IK Sbjct: 252 IKYTQDDDPIEYDRYIKSVSEVVKSVCEDKGIKLPFIVIEPGRSIVASAGITLYRIGTIK 311 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 I +D M D R LY + +E N A I G CE+GD + Sbjct: 312 DIKGVRKYIAVDGGMTDNPRYALYQSKYEGVI-ANKADAAKTEKVTIAGKCCESGDLLGK 370 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + GD+L I TGAY S YN ++V + +I R + ++I Sbjct: 371 DVLLPEAEEGDILAILATGAYNYSMSSNYNRIPRPAVVLVKDGKARVIVKREDYNDIIRN 430 Query: 414 DSIPAWL 420 D IP L Sbjct: 431 DIIPEDL 437 >gi|294671408|ref|ZP_06736257.1| hypothetical protein NEIELOOT_03116 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306885|gb|EFE48128.1| hypothetical protein NEIELOOT_03116 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 406 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 183/405 (45%), Positives = 256/405 (63%), Gaps = 4/405 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 LH EN+S +LA TP Y YS ++ + + AF + ++CYA+KAN N +VI+ Sbjct: 3 LHCENISYTELAERFGTPLYVYSQAELDSAFARYQTAFAALAPLICYAVKANGNLSVIRR 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A++ +FSGVGK+ EI+ AL+SGI CFNVES EL Sbjct: 63 FAELGSGFDIVSGGELARVLAAGGRADKTIFSGVGKSAAEIEFALKSGIKCFNVESLPEL 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 +N+ A L AP++ R+NPD++A TH ISTG K +KFGI + Y +A++LP Sbjct: 123 DRINEIAGRLKTAAPVSLRINPDVDAQTHPYISTGLKANKFGIAMEDAERAYLHAASLPH 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + I G+D HIGSQ+ ++E +A + L L +L ++G +QHID+GGG+GI Y + Sbjct: 183 LNIIGIDCHIGSQLIKLEPLVEACERLLPLIDKLAAHGIGLQHIDLGGGVGIVYQ-NEET 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P + YA+ + + G K+ILEPGR LV + G L+T+V +K++ DK FV++D AMND Sbjct: 242 PDLAAYAAAVQKLLGGRSLKLILEPGRSLVGNAGALLTRVEFVKQNGDKNFVVVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LY AYH I ADIVGPICETGDF+A +R I+ R GDLL + Sbjct: 302 LMRPALYQAYHHIENAEPSIS--APFAADIVGPICETGDFLAKDRMIS-ARAGDLLVVRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY + +G YN+R E+++NGS+ I+R R T +E++ + Sbjct: 359 AGAYASSMAGNYNTRPRAAEVLINGSEAKIVRHRETLEEMLANER 403 >gi|121603580|ref|YP_980909.1| diaminopimelate decarboxylase [Polaromonas naphthalenivorans CJ2] gi|120592549|gb|ABM35988.1| diaminopimelate decarboxylase [Polaromonas naphthalenivorans CJ2] Length = 428 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 162/417 (38%), Positives = 241/417 (57%), Gaps = 4/417 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y + +L AE+V +LA TP + YS TA+ ++ F+G D +CYA+KAN Sbjct: 11 HFAYRDNALFAEDVRASELAATYGTPLFIYSKTAMLSALASYQRGFEGRDAQICYAMKAN 70 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ AV++ A G DIVS GEL R AA ++++FSGVGKT E+ AL +GI CF Sbjct: 71 SSLAVLQVFARADCGFDIVSGGELERVQAAGGDLKKVIFSGVGKTRAEMCQALAAGIGCF 130 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE+EL L++ AV++ +AP++ RVNP+++ TH ISTG K +KFG+ +Y Sbjct: 131 NVESEAELDVLSEVAVAMKLRAPVSIRVNPNVDPKTHPYISTGLKGNKFGVAHEDALRIY 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +A++L G+K+ G+D HIGSQI ++ + A + DL + + G + HID GGGLGI Sbjct: 191 QHAASLEGLKVVGIDCHIGSQITEVTPYLDAMDRVLDLVAAIEAAGIALAHIDFGGGLGI 250 Query: 243 AYHSDHRPPSSSDYASL---IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 Y +D PP + G K+++EPGR LV + GI +T+V+ +K K Sbjct: 251 NYSADDMPPEADALWRQLLAKLDARGYGGKKLMIEPGRSLVGNAGICITEVLYLKPGEQK 310 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND RP +Y A+H I + A + + D+VGP+CE+GD+I +R + Sbjct: 311 NFCIIDAAMNDLPRPAMYQAFHAIVPVERAATETAGVIYDVVGPVCESGDWIGRDRIL-D 369 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L + GAY + YN+R E++V+G +IR R T + + + Sbjct: 370 VAAGDQLAVMSAGAYCMSMASNYNTRGRAAELLVDGDLARLIRARETAADTFRGELL 426 >gi|319409711|emb|CBY90016.1| diaminopimelate decarboxylase (DAP decarboxylase) [Neisseria meningitidis WUE 2594] Length = 414 Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats. Identities = 174/404 (43%), Positives = 247/404 (61%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFENYQTAFAELSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAARLGKTAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLIEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDE-NV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYARAVQKLMGTRRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + + + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYG+ + YN+R E++V+G+++ +IR R T ++ + + Sbjct: 359 AGAYGSSMASNYNTRNRAAEVLVDGNEYRLIRRRETLEQQMANE 402 >gi|304388543|ref|ZP_07370644.1| diaminopimelate decarboxylase [Neisseria meningitidis ATCC 13091] gi|304337463|gb|EFM03631.1| diaminopimelate decarboxylase [Neisseria meningitidis ATCC 13091] Length = 406 Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats. Identities = 176/404 (43%), Positives = 248/404 (61%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ R+NPD++A TH ISTG K +KFGI Y YA+ P Sbjct: 123 DRIQKVAARLGKTAPVSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYHYAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDE-NV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G+++ +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVDGNEYRLIRRRETLEQQMANE 402 >gi|15677805|ref|NP_274969.1| diaminopimelate decarboxylase [Neisseria meningitidis MC58] gi|13124076|sp|Q9JXM2|DCDA_NEIMB RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|7227237|gb|AAF42304.1| diaminopimelate decarboxylase [Neisseria meningitidis MC58] gi|316985611|gb|EFV64558.1| diaminopimelate decarboxylase [Neisseria meningitidis H44/76] gi|325139296|gb|EGC61837.1| diaminopimelate decarboxylase [Neisseria meningitidis CU385] gi|325201024|gb|ADY96479.1| diaminopimelate decarboxylase [Neisseria meningitidis H44/76] Length = 414 Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats. Identities = 176/404 (43%), Positives = 248/404 (61%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ R+NPD++A TH ISTG K +KFGI Y YA+ P Sbjct: 123 DRIQKVAARLGKTAPVSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYHYAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDE-NV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G+++ +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVDGNEYRLIRRRETLEQQMANE 402 >gi|255020055|ref|ZP_05292127.1| Diaminopimelate decarboxylase [Acidithiobacillus caldus ATCC 51756] gi|254970482|gb|EET27972.1| Diaminopimelate decarboxylase [Acidithiobacillus caldus ATCC 51756] Length = 421 Score = 287 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 175/417 (41%), Positives = 251/417 (60%), Gaps = 10/417 (2%) Query: 4 FKYF-----EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA 58 F Y G L E++SL LA TP Y YS + + + + F++A G T +CYA Sbjct: 5 FHYRQLLHGGGQLCVEDLSLADLAERYATPTYVYSESYLRQRFHAFTHAL-GPQTTLCYA 63 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN+N +++ LA G+G DIVS GEL R L A R+VFSGVGK+ DEI AL++ Sbjct: 64 VKANANLSILNRLARWGAGFDIVSGGELARVLRAGGDPTRVVFSGVGKSRDEIRRALEAE 123 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 IYC NVES +EL + Q A LG +APIA RVNPD+ A+TH I+TG +E KFGIP+ + Sbjct: 124 IYCLNVESPAELARIEQVAAELGCRAPIAMRVNPDVEASTHPYIATGLRETKFGIPMAEA 183 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 LY A+ +++ GV HIGSQ+ + +A + + L + L G ++QH+D+GG Sbjct: 184 PLLYERAARSRHLEVLGVACHIGSQLLDLAPIAEAARRVVQLYEALGRQGIHLQHLDLGG 243 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 G+GI YH + P+ +DYA+++ G+L + ++E GR LV + G L+T+V K + + Sbjct: 244 GVGIRYHDEQA-PTPADYAAILDAALGDLPVRRVVELGRALVGNAGALLTRVEYRKYNGN 302 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + F ++D AMND +RP+LY A+HEI + A D+VGP+CE+GDF A R + Sbjct: 303 RAFCVVDAAMNDLLRPSLYGAWHEIWPLERRA--AAQAPMDVVGPVCESGDFFAKARPLP 360 Query: 359 -LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R G++L I GAYG S YNSR EI+V+G+ +IR R T EL + Sbjct: 361 ADLREGEVLAILGAGAYGFAMSSQYNSRPRAAEILVHGTDARVIRRRETLGELWAAE 417 >gi|193212450|ref|YP_001998403.1| diaminopimelate decarboxylase [Chlorobaculum parvum NCIB 8327] gi|193085927|gb|ACF11203.1| diaminopimelate decarboxylase [Chlorobaculum parvum NCIB 8327] Length = 431 Score = 287 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 155/415 (37%), Positives = 235/415 (56%), Gaps = 4/415 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 F Y +G+L E++ L++LA TP + S ++ Y F AF + CY++KA Sbjct: 20 HFFSYSDGTLSCESLKLDELARQYGTPLFVTSRQSLISQYRAFEEAFAALPHFTCYSVKA 79 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N N VI+TLA G G D+ S GEL RAL A VPAE+I+ +GVGKT +EI+ L SG+ Sbjct: 80 NFNLEVIRTLAAEGCGCDVNSGGELYRALKAGVPAEKIIMAGVGKTEEEIEYGLNSGVMM 139 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 ES +ELK +N+ A LGK A + RV P++ A TH I+TG ++KFGI + + Sbjct: 140 IKAESTAELKAINRVAARLGKVAQVGVRVTPNVTAETHPYITTGDSKEKFGIDEAGLAEV 199 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 + L +++ G+DMHIGSQI E + A + L ++ + R G +I+ +D+GGG Sbjct: 200 FDLFKALTNLELHGLDMHIGSQIFDPEYYVAATQKLLEVLESARHLGFDIKWLDLGGGFP 259 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI-KKSADKT 300 Y + +A + + +I EPGRF+ A+ +LVTK++ K A K Sbjct: 260 ATYDPQKPATPITKFAEKLIPMLDDKGVTVIFEPGRFIAANSSVLVTKILYRKKNHAGKE 319 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D M + +RP LY ++HE+ + + AD+VGP+CE+ DF +R I Sbjct: 320 FFIVDAGMTELIRPALYQSHHEVLTVKQHDKS---VVADVVGPVCESSDFFVRHRTIGDA 376 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 G+LL + +GAYGAV YN R E+MV+GS+ +IR R T+++L++ + Sbjct: 377 PEGELLAVLSSGAYGAVMGTNYNGRRRPAEVMVDGSEAKLIRRRETYEQLVQNEI 431 >gi|88813059|ref|ZP_01128301.1| diaminopimelate decarboxylase [Nitrococcus mobilis Nb-231] gi|88789692|gb|EAR20817.1| diaminopimelate decarboxylase [Nitrococcus mobilis Nb-231] Length = 425 Score = 287 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 184/422 (43%), Positives = 256/422 (60%), Gaps = 6/422 (1%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + F G LHAE+++L +A TP Y YS AIE + F +AF G D ++CYA+KA Sbjct: 6 NNFTLRNGVLHAEDIALPSVAKRFGTPCYVYSRRAIEAAWRVFDDAFAGHDHLICYAVKA 65 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN AV+ LA LGSG DIVS GEL R LAA ++VFSGV KT E+ AL+ GI C Sbjct: 66 NSNLAVLNLLARLGSGFDIVSGGELERVLAAGGDPAKVVFSGVAKTEAEMRRALEVGILC 125 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVESE EL+ L A SL ++A ++ R+NPD++ +TH I+TG E+KFGI IH + + Sbjct: 126 FNVESEPELERLAAVAQSLNRRARVSLRINPDVDPDTHPYIATGLSENKFGIDIHAVERV 185 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A+ LPG+ ++GVD HIGSQ+ +IE A + + L +L+ G I H+DVGGG+ Sbjct: 186 YRRAADLPGIDVTGVDFHIGSQLTRIEPITDALERVLALIDRLQGQGIEISHLDVGGGVA 245 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 I Y + PPS YA + + +++LEPGR +V + G+L+T+V +K +A + F Sbjct: 246 IRYRDE-TPPSIGTYARQLLARLESRPLRVLLEPGRAIVGNAGVLLTRVEYLKHTAQRHF 304 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 I+D AMND +RP LYDA+ I +V GD D+VGP+CE+ DF+A +R++AL Sbjct: 305 AIVDAAMNDLLRPALYDAWMAIEAVVPREGDTPTRRYDVVGPVCESADFLARDRELALAA 364 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI----P 417 LL + GAYG V S YNSR E++ +G H+IR R L + + P Sbjct: 365 GD-LLAVRSAGAYGFVMSSNYNSRPRPAELLADGEVIHLIRERECSDALWAGERLVMLGP 423 Query: 418 AW 419 Sbjct: 424 ER 425 >gi|261401778|ref|ZP_05987903.1| diaminopimelate decarboxylase [Neisseria lactamica ATCC 23970] gi|269208091|gb|EEZ74546.1| diaminopimelate decarboxylase [Neisseria lactamica ATCC 23970] Length = 406 Score = 287 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 174/404 (43%), Positives = 246/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + + Sbjct: 183 LKIVGIDCHIGSQLTDLSPLVEACERILILVDSLAAEGIVLEHLDLGGGVGIVYQDE-KV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LY+AYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYNAYHHIEAVE--TKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVDGGGYRLIRRRETLEQQMANE 402 >gi|193213915|ref|YP_001995114.1| diaminopimelate decarboxylase [Chloroherpeton thalassium ATCC 35110] gi|193087392|gb|ACF12667.1| diaminopimelate decarboxylase [Chloroherpeton thalassium ATCC 35110] Length = 417 Score = 287 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 154/416 (37%), Positives = 240/416 (57%), Gaps = 4/416 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 S F Y GSL+ E V + +++ +P + S +I Y F AF ++ + CY++KA Sbjct: 5 SFFHYQNGSLYCEGVPVSEVSKQYGSPVFVTSKASILSQYHAFEEAFQSLNHLTCYSVKA 64 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N N VIK L G G D+ S GEL RAL A +I+ +GVGKT +EI+ AL +GI Sbjct: 65 NYNLEVIKVLVDAGCGFDVNSGGELFRALKAGAEPSKIIMAGVGKTAEEIEYALSTGIMM 124 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 ES+SEL +N+ A AP+ RVNP++ A TH I+TG E+KFGI Sbjct: 125 IKAESQSELILINEIAKKNNLVAPVGIRVNPNVLAETHPYITTGDSEEKFGIDETLAEET 184 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 ++ L + + G+DMHIGSQI +++A L + S G I+HID+GGG Sbjct: 185 FSLIKRLENLNLIGLDMHIGSQIFDTLPYYEATLKLLGVKNIAESMGFEIEHIDIGGGFP 244 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + Y+++ +++A + NL K+I EPGR++VA+ +L+TKV+ K++ Sbjct: 245 VTYNAEKPATPIAEFAKKLVPILSNLNAKVIFEPGRYMVANASVLLTKVLYRKQNYKDKI 304 Query: 302 V-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 I+D AM + +RP+LY ++H++ + + I ADIVGP+CE+GDF A RK+ Sbjct: 305 FLIVDSAMTELLRPSLYKSHHDVLAVAKKDNE---ILADIVGPVCESGDFFARARKVGDV 361 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + G+LL + +GAYG+V YN+RL E++V+G +IR R ++++LI+ + + Sbjct: 362 QEGELLAVMSSGAYGSVMGSNYNARLKPAEVLVSGDAHKLIRKRESYEQLIQNEML 417 >gi|307721570|ref|YP_003892710.1| diaminopimelate decarboxylase [Sulfurimonas autotrophica DSM 16294] gi|306979663|gb|ADN09698.1| diaminopimelate decarboxylase [Sulfurimonas autotrophica DSM 16294] Length = 403 Score = 287 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 161/400 (40%), Positives = 231/400 (57%), Gaps = 3/400 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 V + LA TP Y Y + + Y AF G +++ YA+KANSN +V++ A +G Sbjct: 2 VDFKALAKEYGTPLYVYDFDYMSEQYTELKEAFKGRKSIIAYAVKANSNLSVVRHFAKMG 61 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE+RRA A +PA +I+FSGVGK+ DEI A++ I NVESE+EL+ + Sbjct: 62 SGADCVSIGEVRRAFLAGIPAYKIIFSGVGKSDDEIREAIEKDILYINVESEAELQRVES 121 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A LG+ + I+ RVNP+I+ TH ISTG ++KFG+ + +Y A + G Sbjct: 122 IAEELGRPSRISIRVNPNIDPQTHPYISTGLHDNKFGVDLSTAKRMYIQAKNSEHLDPVG 181 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIGSQ+ Q++ +A +++ DL + L++ ++ DVGGGLG+ Y + D Sbjct: 182 IHFHIGSQLTQLQPIREAAEIVADLIRSLQAIDIELKFFDVGGGLGVKY-GNEETIKPYD 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I+ EPGRFL A+ G VTKV+ K++ DK FV++D AMND +RP+ Sbjct: 241 YAQAILSTLTALDLTILCEPGRFLTANAGYFVTKVLYEKQNGDKKFVVVDGAMNDLLRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYH+I I + + DIVGP+CE+GDF A N + DLL I GAYG Sbjct: 301 LYNAYHKIEAITD--NNGKTREVDIVGPVCESGDFFAKNYPLPELNRNDLLVIHSAGAYG 358 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 YN+R E+ V + +IR R F++LI L+ Sbjct: 359 FGMGSNYNTRGRSAEVAVQNGKARLIRKRECFEDLICLEQ 398 >gi|116754057|ref|YP_843175.1| diaminopimelate decarboxylase [Methanosaeta thermophila PT] gi|116665508|gb|ABK14535.1| diaminopimelate decarboxylase [Methanosaeta thermophila PT] Length = 440 Score = 287 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 155/426 (36%), Positives = 222/426 (52%), Gaps = 12/426 (2%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + G LH ++A TP Y S + +N + AF D +A+KA Sbjct: 19 DHIQVVNGHLHISGADTVEIARRFGTPVYVTSEDRLRENIRRYHRAFPDADK--YFAVKA 76 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N N ++I+ LA G+G D+ S GEL A A VP ERI+F+G K +E+ +A+ SG+ Sbjct: 77 NGNISIIRILAQEGAGADVFSAGELYLARLAGVPRERILFNGNSKRDEELRMAVTSGVR- 135 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 +++SE EL++L++ A K I FRVNPDI+ NTH KI+TG K KFGIP + S+ Sbjct: 136 VSIDSEEELESLSRIASEESKNVEILFRVNPDISVNTHPKIATGLKSSKFGIPAQSVRSI 195 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A + G+K G+ HIGSQI + SF +A + DL ++ G +++ +D+GGGLG Sbjct: 196 CEKAMHMDGIKPIGLHCHIGSQILDVSSFSEAAARMMDLVGEIVDIGGDMELLDLGGGLG 255 Query: 242 IAYHSDHRPPSSSD-------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y P S + ++ K+ILEPGR +VAD IL+T V + Sbjct: 256 IQYDPAAPPAPSPEDLANAVLPVIERRSEELGVRLKLILEPGRSIVADTTILLTGVN-VV 314 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 K A TFV +D N RP LYDAY + N A + +VGPICE+GD +A N Sbjct: 315 KRAHVTFVGVDAGFNVLARPMLYDAY-HYIVVANRADAEISERYTVVGPICESGDVLARN 373 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R + + + GD+L GAYG S YN + E++V + +IR L+ Sbjct: 374 RALPVVKKGDILAFLDAGAYGFSMSSQYNGQPRPAEVLVRDGEVELIRKAEDISALLACQ 433 Query: 415 SIPAWL 420 IP L Sbjct: 434 IIPPRL 439 >gi|332969020|gb|EGK08060.1| diaminopimelate decarboxylase [Kingella kingae ATCC 23330] Length = 408 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 180/404 (44%), Positives = 254/404 (62%), Gaps = 4/404 (0%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 ENVS E+LA+ TP Y YS A+ + Y + AF+ +++CYA+KANSN ++I+ Sbjct: 3 TCENVSFEQLANQFGTPLYVYSENALTQAYRAYEQAFESSKSLICYAIKANSNLSIIQHF 62 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 A LGSG D VS GE+ R LAA A +I+FSGVGK++ E++ AL +GI CFNVES EL Sbjct: 63 AKLGSGFDTVSGGEIARVLAAGGAANKIIFSGVGKSVAEMEFALNAGIKCFNVESLPELD 122 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 LN+ A LGK AP++ R+NPD++A TH ISTG KE+KFGI + Y +AS+L + Sbjct: 123 RLNEVAARLGKIAPVSLRINPDVDAKTHPYISTGLKENKFGIAMADAERAYQHASSLQHL 182 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + G+D HIGSQ+ + +A + + L +L + G +QHID+GGG+GI Y + + P Sbjct: 183 NVVGIDCHIGSQLTDLSPLVEACERMLLLVDKLAAQGIVLQHIDLGGGVGIVYKDE-QTP 241 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++YA + + ++LEPGR LV + G L+T+V IK+ +K FVI+D AMND Sbjct: 242 DLAEYAQAVQKLLAGRDLGLVLEPGRSLVGNAGTLLTRVEFIKQGEEKNFVIVDAAMNDL 301 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 MRP LY AYH I + + AD+VGPICETGDF+A NR+I + GD+L + Sbjct: 302 MRPALYQAYHHIENASDKKQPAMF--ADVVGPICETGDFLAQNREI-VAEQGDVLLVRSA 358 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAYGA + YN+R E++V G +IR R T +L+ L+ Sbjct: 359 GAYGASMASNYNTRCRAVEVLVQGDNVRVIRQRETLDDLLRLEQ 402 >gi|194016686|ref|ZP_03055299.1| diaminopimelate decarboxylase [Bacillus pumilus ATCC 7061] gi|194011292|gb|EDW20861.1| diaminopimelate decarboxylase [Bacillus pumilus ATCC 7061] Length = 441 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 127/422 (30%), Positives = 196/422 (46%), Gaps = 15/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V LA TP Y Y I + +F AF + + V YA KA S+ A Sbjct: 13 GHLEIGGVDAVSLAETYGTPLYVYDVALIRERAKSFQKAFIEEELKAQVAYASKAFSSIA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + G LD+VS GEL A+ A P E+I F G K+ DE+ +AL+ I C V++ Sbjct: 73 MFQLAKEEGLSLDVVSGGELHTAICAGFPVEKIHFHGNNKSRDELKMALEHEIGCIVVDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+K + + L K+ + R+ P + A+TH I+TG+++ KFG +H + A Sbjct: 133 FYEMKLIEELGQELSKQVKVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQADEAVKQ 192 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 L +++ GV HIGSQI F A + + R + +++GGG GI Sbjct: 193 VLGSEVIELLGVHCHIGSQIFDTAGFVLAADKIFLKLDEWRESFGFISTVLNLGGGFGIR 252 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P +++Y I Q + +I +EPGR LV D G + + S K Sbjct: 253 YTEEDEPLPATEYVEKIIQAVKENVTRYEFDMPEIWIEPGRSLVGDAGTTLYTIGSSKHV 312 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D M+D +RP LY A +E N + I G CE+GD + + Sbjct: 313 PGIRDYVAVDGGMSDNIRPALYQAKYEAAS-ANKMSQSHNQTVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GDLL + TGAYG S YN + V + ++ R T+ ++++LD Sbjct: 372 DLPELSQGDLLAVFCTGAYGYSMSNNYNRIPRPAVVFVEDGEAQLVVERETYADIVKLD- 430 Query: 416 IP 417 +P Sbjct: 431 LP 432 >gi|310642618|ref|YP_003947376.1| diaminopimelate decarboxylase [Paenibacillus polymyxa SC2] gi|309247568|gb|ADO57135.1| Diaminopimelate decarboxylase [Paenibacillus polymyxa SC2] Length = 455 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 135/428 (31%), Positives = 199/428 (46%), Gaps = 14/428 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 G L L TP Y + + F AF G+ V YA KA Sbjct: 12 NGHLEIGGCDTTLLKERFGTPLYIVDEQLVRRRCREFIEAFRETGLKFQVAYASKAFCVM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ A G LD+VS GEL AL A PAERI F G KT +EI++AL++ I CF V+ Sbjct: 72 AMCALAAEEGMSLDVVSSGELFTALQAGFPAERIHFHGNNKTPEEIEMALEAQIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYA 183 S+ EL L A G++ I RV P + A+TH+ ++TG+++ KFG I Sbjct: 132 SKMELHLLQALASEKGQQVNILLRVTPGVEAHTHEYMATGQEDSKFGFDIANGTARQAVE 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A L + + GV HIGSQI ++ F A + + ++++ ++ + I++GGG GI Sbjct: 192 QAIKLDHLNLLGVHSHIGSQIFEVNGFQMAAERVAVFCREIKEQLQYSFKVINLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKK 295 Y + P S Y I + +I +EPGR +V D G + V SIK Sbjct: 252 RYTEEDTPLKLSTYVQAIGEAVKTHFSGLYDELPEIWIEPGRSIVGDSGTTLYTVGSIKD 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D RP LY A +E + N A D I G CE+GD + + Sbjct: 312 IPQVRKYVSVDGGMTDNPRPALYQAKYE-AMLANRAQDANEETVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ P GDLL + TGAY + YN + VN + ++ R T+++++ D Sbjct: 371 VELPRPNSGDLLAVASTGAYNYSMASNYNRIRRPAVVFVNNGEAELVVRRETYEDIVRND 430 Query: 415 SIPAWLQK 422 +P L + Sbjct: 431 VLPQRLVR 438 >gi|242309007|ref|ZP_04808162.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter pullorum MIT 98-5489] gi|239524431|gb|EEQ64297.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter pullorum MIT 98-5489] Length = 400 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 168/396 (42%), Positives = 248/396 (62%), Gaps = 3/396 (0%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 ++A QTP + Y IE+ Y F +AF G T++CYALKANSN +V+K LA L SG D Sbjct: 2 QIAKEYQTPIFAYDFDKIEEYYHQFKSAFSGRKTLICYALKANSNLSVVKKLASLESGAD 61 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 VS GE++RA+ A +P +I++SGVGK +EI A++ GI N+ES++EL + A + Sbjct: 62 CVSLGEIKRAILAGIPPYKIIYSGVGKQEEEIKEAIKLGILFINIESKAELFKVESIAKN 121 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 L KA I+ RVNPDI+ TH ISTG KE+KFGI I + SLY +A ++ G+ H Sbjct: 122 LNTKARISIRVNPDIDPQTHPYISTGLKENKFGIEIQEAKSLYLHAHKSEFLEPIGIHFH 181 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 IGSQ+ +++ +++ + + L L + +I+ D+GGGLGI Y + + DYA Sbjct: 182 IGSQLTKLQPIYESAQKIAKLVHSLLALKIDIKFFDIGGGLGITYSDETTI-NPYDYAQS 240 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 I + L II EPGRF++ + G+ + KV+ K S +K FVI+D AMND +RP+LY+A Sbjct: 241 ILECLRGLDLTIICEPGRFIIGNAGVFLVKVLYEKISQNKRFVIVDGAMNDLIRPSLYNA 300 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 YH+I + P G++ ADIVGPICE+GD++ N ++ + GD+L I +GAYG S Sbjct: 301 YHQIIPLTQPQGEKS--PADIVGPICESGDYLGKNIELPPLKEGDVLAILSSGAYGFSMS 358 Query: 380 GTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 YN+R E+ ++ + +IR R TF++LI L+ Sbjct: 359 SNYNTRPRCAEVAISQGKIKLIRKRETFEDLIALEK 394 >gi|225175576|ref|ZP_03729570.1| diaminopimelate decarboxylase [Dethiobacter alkaliphilus AHT 1] gi|225168905|gb|EEG77705.1| diaminopimelate decarboxylase [Dethiobacter alkaliphilus AHT 1] Length = 446 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 123/435 (28%), Positives = 205/435 (47%), Gaps = 12/435 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQ 65 +G L LA TP Y I KN + + F ++ V YA KA + Sbjct: 12 KGHLEVGGCDTLDLAKEFGTPLYVMDEEQIRKNCAEYRDTFKEHYPNSQVAYAGKAFLTK 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + + G LD+VS GE+ ALAA PAE++++ G KT +EI++AL++G+ F V+ Sbjct: 72 AMCRLVDDEGLALDVVSGGEIHTALAAGFPAEKMLYHGNNKTPEEIEMALENGVGRFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--A 183 S SEL+ LN A GK A + R+ P + A+TH I TG+ + KFG+ + ++ Sbjct: 132 SYSELELLNALAGEAGKVAGLYLRIKPGVEAHTHHYIQTGQVDSKFGMGLADGEAMTAVK 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGI 242 A+ + V++ G+ HIGSQI ++ F A ++ D Q+++ + +D+GGG GI Sbjct: 192 MAAKMKHVELKGLHCHIGSQIFDLKPFQMAAAVMVDFMQEIKKKTGTVIGELDLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y + P S S + K+++EPGR ++ + GI + V S+K+ Sbjct: 252 RYTREDSPYSLSGFVELIAKTVKDKCAEHNYPLPKLLVEPGRSIIGEAGITLYTVGSVKE 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D+ I G CE+GD + + Sbjct: 312 IPGVRKYVAVDGGMMDNLRPAMYEAKYEAVVANRMNDQAEEKVSIAGKACESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ + GDL+ + TGAY + YN P + V Q ++ R ++ +L++ D Sbjct: 372 ELPKLQRGDLMAVLSTGAYHYSMANNYNRFPRPPVVFVKDGQADLVVARESYDDLVQNDI 431 Query: 416 IPAWLQKTPKQSSEN 430 IPA +Q + + N Sbjct: 432 IPARMQAPAAKKAAN 446 >gi|322435524|ref|YP_004217736.1| diaminopimelate decarboxylase [Acidobacterium sp. MP5ACTX9] gi|321163251|gb|ADW68956.1| diaminopimelate decarboxylase [Acidobacterium sp. MP5ACTX9] Length = 433 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 181/417 (43%), Positives = 244/417 (58%), Gaps = 6/417 (1%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F Y +L + SL LA TP Y YS I F AF +CYA+KANS Sbjct: 20 FAYRNRALSCDQTSLATLAATHGTPLYVYSQQHILGRLALFQQAFASRPHTICYAVKANS 79 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA-ERIVFSGVGKTIDEIDLALQSGIYCF 122 A++K LA G+G DIVS GEL R + A PA ++ VF+GVGK I EID AL++GI F Sbjct: 80 ALAILKLLAQNGAGFDIVSGGELARVVKAAKPAVKKTVFAGVGKQIPEIDAALKAGILLF 139 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESESEL L RA L A + RVNPD+ A TH ISTG KFGI I+ ++Y Sbjct: 140 NVESESELALLADRAELLKIPARFSLRVNPDVFAETHPYISTGLSAHKFGIDINAARAIY 199 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ + +GV +HIGSQI ++ F A + L QQL+ +G + HID GGGLGI Sbjct: 200 RKAAKSKYLIPTGVSVHIGSQIRAVDPFGAALDRVTSLIQQLKKDGITLTHIDAGGGLGI 259 Query: 243 AYHSDHRPPSSSDYASLIH--QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y P+++ A + +L ++LEPGRFLVA G L+T V+++KK+ +KT Sbjct: 260 EYTDAPFDPAAAVAAYAKQVLEATDHLDLHLLLEPGRFLVAQAGALLTTVVNVKKNGNKT 319 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVI D MND +RP LY A+H+I + + DIVGP+CE+GDF A +R + Sbjct: 320 FVITDAGMNDLIRPALYQAHHQILPVRQTSAKSS--PVDIVGPVCESGDFFARDRDLPAT 377 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 +PGDLL I GAYG + YN+R PE++V+G++ +IR R T ++L + +P Sbjct: 378 KPGDLLAILDAGAYGMSLTSNYNTRTRPPEVLVDGAESRLIRRRETIKDLFAPE-LP 433 >gi|332187942|ref|ZP_08389675.1| diaminopimelate decarboxylase [Sphingomonas sp. S17] gi|332012103|gb|EGI54175.1| diaminopimelate decarboxylase [Sphingomonas sp. S17] Length = 420 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 174/423 (41%), Positives = 252/423 (59%), Gaps = 4/423 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYAL 59 M F + G LH E+V + ++A V TP Y YS + ++ F + + YA+ Sbjct: 1 MDHFHFSNGELHVEDVPVARIAAEVGTPVYIYSASTFRRHAQVFREGLSALPRVHLAYAI 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN N AV++ LA G G D+VS GE+RRALAA + AE IVFSGVGKT E+ AL++GI Sbjct: 61 KANPNLAVLRVLADEGYGADVVSVGEMRRALAAGMKAEDIVFSGVGKTRAELIAALEAGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 FN+E E E L + A G AP RVNPD++A TH KISTG+KE+KFG+PI Q Sbjct: 121 GQFNLELEEEGAVLAELAHERGLVAPATLRVNPDVDAGTHAKISTGRKENKFGVPIDQAL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++ + LPG+ + GV HIGSQ+ + A+K + +L +LR GH + +D+GGG Sbjct: 181 GMFDRLAGLPGIDLKGVACHIGSQLGDLAPLEAAYKRVGELVAELRGAGHRVTRVDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y P+ + Y ++ + + +++ EPGR + + G+L T+V+ +K Sbjct: 241 LGVPYKPGDVMPAPAAYGEMVARVTKDWDVELMFEPGRVIAGNAGVLATEVVWVKPGVAN 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 +VI+D AMND RP LYDAYH+ + A+I GP+CETGD A+NR+I + Sbjct: 301 PYVIVDAAMNDLARPALYDAYHDFV---AVKPTGETMMANIAGPVCETGDTFAMNREIDV 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + GDL GAYGA + TYNSR L+PE+MV G +F ++ R+ + +I + +P W Sbjct: 358 VKSGDLAVFRTAGAYGATMASTYNSRPLVPEVMVEGDRFAVVADRIAAETIIAAERVPEW 417 Query: 420 LQK 422 L+K Sbjct: 418 LKK 420 >gi|254478073|ref|ZP_05091456.1| diaminopimelate decarboxylase [Carboxydibrachium pacificum DSM 12653] gi|214035935|gb|EEB76626.1| diaminopimelate decarboxylase [Carboxydibrachium pacificum DSM 12653] Length = 447 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 127/427 (29%), Positives = 197/427 (46%), Gaps = 12/427 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQ 65 +G L +LA TP Y + N F NA + V YA KA Sbjct: 11 KGHLVIGGCDAVELAERFGTPLYVIDEDVLRANSRIFYNALKSHNPENEVVYAGKAFLTT 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ K + G GLD+VS GEL AL A P E+I F G K+ +E+ +ALQS + ++ Sbjct: 71 AMCKIIQQEGLGLDVVSGGELYTALKAGFPTEKIYFHGNNKSEEELIMALQSEVGRIIID 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--A 183 + EL+ L A L K+ I RV P I A+TH+ I TG+ + KFG I + Sbjct: 131 NWDELELLEILAKKLNKEPAIYIRVTPGIEAHTHRYIMTGQIDSKFGFTISNGEAFKAVK 190 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGI 242 A T +K G+ HIGSQI + + A K++ +L ++++ G ++ +D+GGG GI Sbjct: 191 RALTSGSLKFKGLHCHIGSQILESTPYKIAVKIMLELLKEIKDTLGRGVEELDLGGGFGI 250 Query: 243 AY-HSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGILVTKVISIKK 295 Y D P ++ + + KII+EPGR ++ + GI + KV +K+ Sbjct: 251 PYVEDDSYQPVEEMLRDILEELEAQVSLLKVKLPKIIVEPGRAIIGNTGITLYKVGGVKE 310 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + T I N + I G +CE+GD I + Sbjct: 311 IPGVRKYVFVDGGMSDNIRTALYGARYSAVIANRVYNGRLEKVTIAGKLCESGDVIIWDI 370 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GD++ + TGAYG + YN I+V+ + II R T++++I+ D Sbjct: 371 LLPEVKKGDIIAVLNTGAYGYSMASNYNRLPKPAVILVSKGKAEIIVKRETYEDVIKNDV 430 Query: 416 IPAWLQK 422 IP L++ Sbjct: 431 IPERLEE 437 >gi|20806736|ref|NP_621907.1| diaminopimelate decarboxylase [Thermoanaerobacter tengcongensis MB4] gi|20515193|gb|AAM23511.1| Diaminopimelate decarboxylase [Thermoanaerobacter tengcongensis MB4] Length = 447 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 127/427 (29%), Positives = 197/427 (46%), Gaps = 12/427 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQ 65 +G L +LA TP Y + N F NA + V YA KA Sbjct: 11 KGHLVIGGCDAVELAERFGTPLYVIDEDVLRANSRIFYNALKSHNPENEVVYAGKAFLTT 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ K + G GLD+VS GEL AL A P E+I F G K+ +E+ +ALQS + ++ Sbjct: 71 AMCKIIQQEGLGLDVVSGGELYTALKAGFPTEKIYFHGNNKSEEELIMALQSEVGRIIID 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--A 183 + EL+ L A L K+ I RV P I A+TH+ I TG+ + KFG I + Sbjct: 131 NWDELELLEILAKKLNKEPAIYIRVTPGIEAHTHRYIMTGQIDSKFGFTISNGEAFKAVK 190 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGI 242 A T +K G+ HIGSQI + + A K++ +L ++++ G ++ +D+GGG GI Sbjct: 191 RALTSGSLKFKGLHCHIGSQILESTPYKIAVKIMLELLKEIKDTLGRGVEELDLGGGFGI 250 Query: 243 AY-HSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGILVTKVISIKK 295 Y D P ++ + + KII+EPGR ++ + GI + KV +K+ Sbjct: 251 PYVEDDSYQPVEEMLRDILEELEAQVSLLKIKLPKIIVEPGRAIIGNTGITLYKVGGVKE 310 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + T I N + I G +CE+GD I + Sbjct: 311 IPGVRKYVFVDGGMSDNIRTALYGARYSAVIANRVYNGRLEKVTIAGKLCESGDVIIWDI 370 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GD++ + TGAYG + YN I+V+ + II R T++++I+ D Sbjct: 371 LLPEVKKGDIIAVLNTGAYGYSMASNYNRLPKPAVILVSKGKAEIIVKRETYEDVIKNDV 430 Query: 416 IPAWLQK 422 IP L++ Sbjct: 431 IPERLEE 437 >gi|327398433|ref|YP_004339302.1| diaminopimelate decarboxylase [Hippea maritima DSM 10411] gi|327181062|gb|AEA33243.1| diaminopimelate decarboxylase [Hippea maritima DSM 10411] Length = 412 Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 175/414 (42%), Positives = 249/414 (60%), Gaps = 4/414 (0%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F+Y L+AE V ++ + V +P Y YS + + F+ AF + ++ +A+K+NS Sbjct: 2 FEYKNNELYAEGVRVKNIVDNVGSPVYVYSKGHFKAQFEKFNKAFSR-EHVIAFAIKSNS 60 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N AVIKT A LG+G DIVS+GEL RA+ A V +IVFSGV K DEI+ AL++ I N Sbjct: 61 NLAVIKTFASLGAGADIVSKGELFRAIKAGVDTSKIVFSGVAKRDDEIEYALENDIMMIN 120 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 VESE EL +N+ A L KKA IAFRVNPD++ TH ISTG K++KFG+P + + LY Sbjct: 121 VESEDELYNVNRVAEKLNKKARIAFRVNPDVDPKTHPYISTGLKKNKFGVPYEEAYDLYL 180 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A L + + G+ HIGSQ+ + A + DL ++L G + +DVGGG+GI Sbjct: 181 KAKELKNIDVYGIQFHIGSQLLDTTPIYDASVRVADLMRRLTDKGVEFRVVDVGGGVGIV 240 Query: 244 YHSDHRP-PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y P + YA I + F + K++LEPGRFLV + GILV+KVI K + K F+ Sbjct: 241 YDEKTDKEPDVNLYARQIEEAFRDFDVKLVLEPGRFLVGNGGILVSKVIYHKTNGQKNFL 300 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D MND +RP+LY AYH+I + I DIVGPICETGDF A + +I Sbjct: 301 IIDAGMNDLLRPSLYKAYHKIAPMKKTGSKA--IKCDIVGPICETGDFFARDYEIEDVPN 358 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 G+ + + GAYG + YNSR E++V+G + ++R R + ++LI+ + + Sbjct: 359 GNFIVVFSAGAYGFTMASNYNSRPRPAEVLVSGDSYRVVRERESLEDLIKGEIL 412 >gi|309378898|emb|CBX22485.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 406 Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 176/404 (43%), Positives = 244/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ K + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEEFGTPLYVYSQSALTKAFEHYQTAFAALNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLIEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDE-SV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + L A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVETKNISPL--TANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVDGGGYRLIRRRETLEQQMANE 402 >gi|295706474|ref|YP_003599549.1| diaminopimelate decarboxylase [Bacillus megaterium DSM 319] gi|294804133|gb|ADF41199.1| diaminopimelate decarboxylase [Bacillus megaterium DSM 319] Length = 439 Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 126/422 (29%), Positives = 196/422 (46%), Gaps = 14/422 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSN 64 +G L V +LA TP Y Y I + F F+ V YA KA S Sbjct: 11 RQGHLEIGGVDTVELASDFGTPLYVYDVALIRQRARGFKETFEKHGVKAQVAYASKAFST 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+++ + G LD+VS GEL ALAA P ERI F G K+ E+++A++ + C V Sbjct: 71 IAMVQVVHEEGLSLDVVSGGELYTALAADFPKERIHFHGNNKSRAELEMAIKEDVGCIVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E+ L + KK P+ R+ P I A+TH I TG+++ KFG + + A Sbjct: 131 DNFYEIALLQEITEQYQKKMPVLLRLTPGIEAHTHDYILTGQEDSKFGFDLQNGQADEAV 190 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGGGLG 241 G+++ G+ HIGSQI + F A + L ++ + Q +++GGG G Sbjct: 191 RLVQNSKGLELLGIHCHIGSQIFETTGFIMATQKLFAKMKEWKQRIKFVPQVLNLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIK 294 I Y + +P S Y +I + +I +EPGR LV D G + + S K Sbjct: 251 IRYTEEDQPIPVSQYVEVIIEEVKKQSKQLEVEIPEIWIEPGRSLVGDAGTTLYSIGSRK 310 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + +D MND +RP LY A +E N D I G CE+GD + Sbjct: 311 HVPNVREYVAIDGGMNDNIRPALYQAKYEAVI-ANRMNDESDELVSIAGKCCESGDMLMW 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + ++ P DLL + TGAYG + YN + V + ++ R T++++++ Sbjct: 370 DVQLPKANPDDLLAMFCTGAYGYSMASHYNRLPKPAVVFVEDGEAQLVVKRETYEDIVKN 429 Query: 414 DS 415 D Sbjct: 430 DV 431 >gi|303241562|ref|ZP_07328062.1| diaminopimelate decarboxylase [Acetivibrio cellulolyticus CD2] gi|302590880|gb|EFL60628.1| diaminopimelate decarboxylase [Acetivibrio cellulolyticus CD2] Length = 437 Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 137/427 (32%), Positives = 210/427 (49%), Gaps = 15/427 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 + L L + TP Y + I +N + NA D + MV YA KA S Sbjct: 12 KNHLEIGGCDCVDLVNNYGTPVYVLDESLIRENCRLYKNAMDKYYDGNGMVLYASKALST 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 AV K + G GLD+VS GEL A+ A VP +RI F G KT +E++LA+ + I V Sbjct: 72 MAVCKIVEQEGLGLDVVSGGELYTAMKAGVPMDRIYFHGNNKTCEELELAISNNIRRIVV 131 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ ELK +N A GK I+FR+ P I+A+TH + TG+ + KFG+ + ++ Sbjct: 132 DNREELKRVNDIASKQGKVVNISFRIKPGIDAHTHDFVQTGQIDSKFGVALENGEAIEII 191 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLG 241 A+ + VK++GV HIGSQI +E F A K++ + ++++ I+ +++GGG G Sbjct: 192 GEAAKMKNVKVAGVHCHIGSQIFDLEPFKLAAKVMLEFIAKIKNEIGLEIEELNLGGGFG 251 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK 294 I Y + P Y + + ++ I++EPGR +VA GI + KV ++K Sbjct: 252 IKYTMNDDPIEYDHYIESVSKVVRSVCEEKGIKLPFIVMEPGRSIVASAGITLYKVGAVK 311 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 D +D M D R LY + ++ N A I G CE+GD +A Sbjct: 312 DIKDVRTYVSVDGGMTDNPRYALYQSRYDALI-ANRADAPKVQDVTIAGKCCESGDLLAK 370 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ + GD+L + TGAY S YN P ++V + +I R F ++I Sbjct: 371 DIKMPEIQAGDILAVLATGAYNYSMSSNYNRIPKPPIVLVKNGKSRVIVKREDFDDIIRN 430 Query: 414 DSIPAWL 420 D IP L Sbjct: 431 DIIPEDL 437 >gi|261378590|ref|ZP_05983163.1| diaminopimelate decarboxylase [Neisseria cinerea ATCC 14685] gi|269144922|gb|EEZ71340.1| diaminopimelate decarboxylase [Neisseria cinerea ATCC 14685] Length = 406 Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 176/404 (43%), Positives = 243/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPHLAEEFGTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A L K AP++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAARLSKTAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDE-HV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++VNG + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVNGGGYKLIRRRETLEQQMANE 402 >gi|147919802|ref|YP_686452.1| diaminopimelate decarboxylase [uncultured methanogenic archaeon RC-I] gi|110621848|emb|CAJ37126.1| diaminopimelate decarboxylase [uncultured methanogenic archaeon RC-I] Length = 427 Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 150/424 (35%), Positives = 227/424 (53%), Gaps = 12/424 (2%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 + L V LA TP Y + + NY FS AF G+ + +A K+N Sbjct: 9 HLEVKGNHLTIGGVDAVSLAETYGTPLYVTNEDRLRDNYRRFSAAFPGVS--IFFAAKSN 66 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 +N V + A G+G D S+GE+ A A +PAE+I+F+G KT E+ A+ SG+ Sbjct: 67 NNLVVQRIFAQEGAGADAFSDGEIYLARMAGIPAEKILFTGNSKTDAELQYAIDSGVM-V 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 +V+S EL L++ A K+ IAFRVNPD++A+ H K++TG K KFGIP I S+Y Sbjct: 126 SVDSRDELLALSKLAKKAKKEVKIAFRVNPDVSADAHPKLATGLKVSKFGIPTKDIVSIY 185 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A LPGV G+ HIGSQI + + +A + DL +Q+ +++ +D+GGG GI Sbjct: 186 KEAKKLPGVNPVGIHCHIGSQILETAPYTEATNKMMDLVEQISG-FIDLEWVDLGGGFGI 244 Query: 243 AYHSDHRPPSSSDYA------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P+ D+A + ++ LEPGR++VAD +L+ +V ++K Sbjct: 245 PYQKGTKVPTPKDWAKAILPTFKARCKKIGISPELHLEPGRYMVADSTVLLMRVNTVK-K 303 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 A K FV D N +RP +YD+YHE N AG +VGPICE+GD +A +R+ Sbjct: 304 AYKNFVGTDAGFNTLIRPAMYDSYHEAVI-ANKAGSPAKGEYTVVGPICESGDILATDRQ 362 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + + D++ + GAYG S Y R E++V+ + +IR R TF +L++ + Sbjct: 363 LPVVEKDDIVALLDAGAYGFCMSSQYVGRPRCAEVLVHNGKADLIRKRETFDDLLQNQIM 422 Query: 417 PAWL 420 P L Sbjct: 423 PGRL 426 >gi|169831365|ref|YP_001717347.1| diaminopimelate decarboxylase [Candidatus Desulforudis audaxviator MP104C] gi|169638209|gb|ACA59715.1| diaminopimelate decarboxylase [Candidatus Desulforudis audaxviator MP104C] Length = 440 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 130/426 (30%), Positives = 199/426 (46%), Gaps = 11/426 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L L V TP Y +N + AF V YA KA A Sbjct: 11 EKGHLEIGGCDAVDLVRVFGTPLYVLDEALFRENCRLYRVAFARGGGGVLYAGKALLTLA 70 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + + G GLD+VS GEL A+ A P +R+ F G KT DE+ +AL +G++ F +S Sbjct: 71 VCRLVEEEGLGLDVVSGGELYTAVQAGFPMDRVYFHGNNKTADEVRMALSAGVHRFVCDS 130 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 EL L++ A+ LGK+ + R+ P I A+TH I TG+ + KFG+ I +L A Sbjct: 131 FDELDLLSRLALELGKECNLLLRLTPGIEAHTHDYIRTGQIDSKFGLAIPNGQALEAVRR 190 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGGGLGIA 243 L P +K+ G+ HIGSQI ++E + A ++L + +Q+R I+ +D+GGGLGI Sbjct: 191 CLERPALKLRGLHCHIGSQIFELEPYADAARILMEFARQVRDVTGWVIEELDLGGGLGIY 250 Query: 244 YHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y PP+ A I K+++EPGR + G + V ++K+ Sbjct: 251 YSPGDDPPAVETLAETIFGAVAQAAASEGLPIPKVLVEPGRSIAGPAGTTLYTVGTVKEI 310 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D M D RP LY A +E G + + G CE+GD + Sbjct: 311 PGVRTYVAVDGGMGDNPRPALYGARYEACLANRMNGRLDTLAVSLAGRCCESGDLLIRQA 370 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + R GD++ + TGAY + YN ++V +I R ++ +LI D Sbjct: 371 DLPPVRVGDVVAVSCTGAYTYSMASNYNRFPRPAMVLVRDGSAELIVRRESYADLIRNDI 430 Query: 416 IPAWLQ 421 +P + Sbjct: 431 VPVRFR 436 >gi|154147876|ref|YP_001406852.1| diaminopimelate decarboxylase [Campylobacter hominis ATCC BAA-381] gi|153803885|gb|ABS50892.1| diaminopimelate decarboxylase [Campylobacter hominis ATCC BAA-381] Length = 412 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 165/405 (40%), Positives = 239/405 (59%), Gaps = 11/405 (2%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA TP Y Y I+ YL NAF ++VC+A+KANSN +V+K LA+LGSG D Sbjct: 6 LATKYGTPLYIYDFDYIKSRYLALKNAFSARKSLVCFAVKANSNLSVLKFLANLGSGFDC 65 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+RRAL A A +I+FSGVGK +E+ ALQ+ I N+ES +E+ L A L Sbjct: 66 VSIGEVRRALLAGANAYKIIFSGVGKKDEELKEALQNNILMINLESPAEMLRLENIAKEL 125 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 K+A I+ RVNP+++A TH ISTG E+KFG+ I + +Y YA ++ G+ HI Sbjct: 126 KKQARISIRVNPNVDAKTHPYISTGLNENKFGVEISEAKKMYLYAKKSEWLQPYGIHFHI 185 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 GSQ+ ++ +A ++ ++ +L++ +I+ DVGGG+G+ Y + S DYA I Sbjct: 186 GSQLTELAPIIEAANIVSNIMSELKALEIDIKFFDVGGGIGVIY-ENENEISLYDYAQGI 244 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 +I EPGRFL A+ G+ +TKV+ K ++ K FVI+D AMND +RP+LY+A+ Sbjct: 245 LGALKGQDVTVICEPGRFLTANAGVFLTKVLYQKLNSKKRFVIVDGAMNDLIRPSLYNAH 304 Query: 321 HEINYIVNPAGDRLHI----------HADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 H I+ + G+ + AD+VGPICE+ DF+A N + + GDLL ++ Sbjct: 305 HGISVVSKQNGEISNENSVQNLNEISKADVVGPICESSDFLAKNVDLPELKNGDLLLVKS 364 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAYG S YNSRL E+ + +IR R +F+ LI L+ Sbjct: 365 AGAYGFSMSSNYNSRLRCAEVALENGTDRLIRRRESFEYLIALER 409 >gi|59802399|ref|YP_209111.1| hypothetical protein NGO2098 [Neisseria gonorrhoeae FA 1090] gi|239998049|ref|ZP_04717973.1| hypothetical protein Ngon3_00993 [Neisseria gonorrhoeae 35/02] gi|240079813|ref|ZP_04724356.1| hypothetical protein NgonF_00641 [Neisseria gonorrhoeae FA19] gi|240114768|ref|ZP_04728830.1| hypothetical protein NgonPID1_00673 [Neisseria gonorrhoeae PID18] gi|240116968|ref|ZP_04731030.1| hypothetical protein NgonPID_00658 [Neisseria gonorrhoeae PID1] gi|240122606|ref|ZP_04735562.1| hypothetical protein NgonP_01441 [Neisseria gonorrhoeae PID332] gi|240124794|ref|ZP_04737680.1| hypothetical protein NgonSK_00970 [Neisseria gonorrhoeae SK-92-679] gi|240127312|ref|ZP_04739973.1| hypothetical protein NgonS_01425 [Neisseria gonorrhoeae SK-93-1035] gi|260441419|ref|ZP_05795235.1| hypothetical protein NgonDG_10117 [Neisseria gonorrhoeae DGI2] gi|268593898|ref|ZP_06128065.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae 35/02] gi|268595955|ref|ZP_06130122.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae FA19] gi|268600416|ref|ZP_06134583.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID18] gi|268602648|ref|ZP_06136815.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID1] gi|268681197|ref|ZP_06148059.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID332] gi|268683367|ref|ZP_06150229.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae SK-92-679] gi|268685676|ref|ZP_06152538.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae SK-93-1035] gi|291044781|ref|ZP_06570490.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae DGI2] gi|293397871|ref|ZP_06642077.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae F62] gi|59719294|gb|AAW90699.1| putative diaminopimelate decarboxylase [Neisseria gonorrhoeae FA 1090] gi|268547287|gb|EEZ42705.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae 35/02] gi|268549743|gb|EEZ44762.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae FA19] gi|268584547|gb|EEZ49223.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID18] gi|268586779|gb|EEZ51455.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID1] gi|268621481|gb|EEZ53881.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID332] gi|268623651|gb|EEZ56051.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae SK-92-679] gi|268625960|gb|EEZ58360.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae SK-93-1035] gi|291011675|gb|EFE03671.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae DGI2] gi|291611817|gb|EFF40886.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae F62] gi|317165492|gb|ADV09033.1| hypothetical protein NGTW08_2082 [Neisseria gonorrhoeae TCDC-NG08107] Length = 406 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 176/404 (43%), Positives = 245/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEEFGTPLYVYSQSALTGAFENYQTAFAALNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKIAARLGKTAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDE-GV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYARAVQKLMGTRRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + + L A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVETKNIEPL--TANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNTRNRAAEVLVDGGGYKLIRRRETLEQQMANE 402 >gi|294501127|ref|YP_003564827.1| diaminopimelate decarboxylase [Bacillus megaterium QM B1551] gi|294351064|gb|ADE71393.1| diaminopimelate decarboxylase [Bacillus megaterium QM B1551] Length = 439 Score = 285 bits (730), Expect = 7e-75, Method: Composition-based stats. Identities = 126/422 (29%), Positives = 195/422 (46%), Gaps = 14/422 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSN 64 +G L V +LA TP Y Y I + F F+ V YA KA S Sbjct: 11 KQGHLEIGGVDTVELASNFGTPLYVYDVALIRQRARGFKETFEKHGVKAQVAYASKAFST 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+++ + G LD+VS GEL ALAA P ERI F G K+ E+++A++ + C V Sbjct: 71 IAMVQVVHEEGLSLDVVSGGELYTALAADFPKERIHFHGNNKSRAELEMAIKEDVGCIVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E+ L + KK P+ R+ P I A+TH I TG+++ KFG + + A Sbjct: 131 DNFYEIALLQEITEQYQKKMPVLLRLTPGIEAHTHDYILTGQEDSKFGFDLQNGQADEAV 190 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLG 241 G+++ G+ HIGSQI + F A + L ++ + Q +++GGG G Sbjct: 191 RLVQNSKGLELLGIHCHIGSQIFETTGFIMATQKLFAKMKEWKQRIEFVPQVLNLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIK 294 I Y + +P S Y +I + +I +EPGR LV D G + + S K Sbjct: 251 IRYTEEDQPIPVSQYVEVIIEEVKKQSKQLEVEIPEIWIEPGRSLVGDAGTTLYSIGSRK 310 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + +D MND +RP LY A +E N D I G CE+GD + Sbjct: 311 HVPNVREYVAIDGGMNDNIRPALYQAKYEAVI-ANRMNDESDELVSIAGKCCESGDMLMW 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + P DLL + TGAYG + YN + V + ++ R T++++++ Sbjct: 370 DVHLPKANPDDLLAMFCTGAYGYSMASHYNRLPKPAVVFVEDGEAQLVVKRETYEDIVKN 429 Query: 414 DS 415 D Sbjct: 430 DV 431 >gi|53720784|ref|YP_109770.1| diaminopimelate decarboxylase [Burkholderia pseudomallei K96243] gi|53723888|ref|YP_104274.1| diaminopimelate decarboxylase [Burkholderia mallei ATCC 23344] gi|67641896|ref|ZP_00440661.1| diaminopimelate decarboxylase [Burkholderia mallei GB8 horse 4] gi|121598495|ref|YP_994480.1| diaminopimelate decarboxylase [Burkholderia mallei SAVP1] gi|124383764|ref|YP_001027872.1| diaminopimelate decarboxylase [Burkholderia mallei NCTC 10229] gi|126440111|ref|YP_001060712.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 668] gi|126450624|ref|YP_001082967.1| diaminopimelate decarboxylase [Burkholderia mallei NCTC 10247] gi|134283137|ref|ZP_01769838.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 305] gi|167004384|ref|ZP_02270142.1| diaminopimelate decarboxylase [Burkholderia mallei PRL-20] gi|167721539|ref|ZP_02404775.1| diaminopimelate decarboxylase [Burkholderia pseudomallei DM98] gi|167817718|ref|ZP_02449398.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 91] gi|167826115|ref|ZP_02457586.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 9] gi|167896199|ref|ZP_02483601.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 7894] gi|167920804|ref|ZP_02507895.1| diaminopimelate decarboxylase [Burkholderia pseudomallei BCC215] gi|217424773|ref|ZP_03456270.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 576] gi|226198282|ref|ZP_03793853.1| diaminopimelate decarboxylase [Burkholderia pseudomallei Pakistan 9] gi|254174722|ref|ZP_04881383.1| diaminopimelate decarboxylase [Burkholderia mallei ATCC 10399] gi|254180377|ref|ZP_04886975.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1655] gi|254201350|ref|ZP_04907714.1| diaminopimelate decarboxylase [Burkholderia mallei FMH] gi|254206692|ref|ZP_04913043.1| diaminopimelate decarboxylase [Burkholderia mallei JHU] gi|52211198|emb|CAH37187.1| diaminopimelate decarboxylase [Burkholderia pseudomallei K96243] gi|52427311|gb|AAU47904.1| diaminopimelate decarboxylase [Burkholderia mallei ATCC 23344] gi|121227305|gb|ABM49823.1| diaminopimelate decarboxylase [Burkholderia mallei SAVP1] gi|124291784|gb|ABN01053.1| diaminopimelate decarboxylase [Burkholderia mallei NCTC 10229] gi|126219604|gb|ABN83110.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 668] gi|126243494|gb|ABO06587.1| diaminopimelate decarboxylase [Burkholderia mallei NCTC 10247] gi|134245332|gb|EBA45425.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 305] gi|147747244|gb|EDK54320.1| diaminopimelate decarboxylase [Burkholderia mallei FMH] gi|147752234|gb|EDK59300.1| diaminopimelate decarboxylase [Burkholderia mallei JHU] gi|160695767|gb|EDP85737.1| diaminopimelate decarboxylase [Burkholderia mallei ATCC 10399] gi|184210916|gb|EDU07959.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1655] gi|217392229|gb|EEC32254.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 576] gi|225929802|gb|EEH25818.1| diaminopimelate decarboxylase [Burkholderia pseudomallei Pakistan 9] gi|238522908|gb|EEP86350.1| diaminopimelate decarboxylase [Burkholderia mallei GB8 horse 4] gi|243060289|gb|EES42475.1| diaminopimelate decarboxylase [Burkholderia mallei PRL-20] Length = 423 Score = 285 bits (730), Expect = 7e-75, Method: Composition-based stats. Identities = 181/416 (43%), Positives = 247/416 (59%), Gaps = 4/416 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G+LHAE VS +LA TP + YS A+ Y ++ A G + A+KAN Sbjct: 5 AFDYVDGTLHAERVSTVELAERFGTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN V+ A LG+G DIVS GEL R LAA A +VFSGVGK+ DE+ +AL++G+ CF Sbjct: 65 SNLGVLNVFARLGAGFDIVSGGELARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A SLGK+AP++ RVNPD++ TH ISTG K +KFGI + Y Sbjct: 125 NVESIPELDRLNAVAASLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LP +++ G+D HIGSQI ++ + A L DL +++ ++G I H+DVGGGLGI Sbjct: 185 RAAAALPNLEVVGIDCHIGSQITELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G+ Q +I EPGR L + GIL+T+V +K+ +K Sbjct: 245 TYDDETPPDIGAYVRAVLARIDARGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y V P D DIVGP+CE+GD++ R +A Sbjct: 305 FAIVDAAMNDLARPAMYQ-AFHAIVPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-I 362 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL I GAYG S YN+R E++V+G+ H++RPR T + L E ++I Sbjct: 363 APGDLLAIRSAGAYGFTMSSNYNTRPRAAEVIVDGANAHLVRPRETVESLFEHETI 418 >gi|325135569|gb|EGC58187.1| diaminopimelate decarboxylase [Neisseria meningitidis M0579] gi|325201385|gb|ADY96839.1| diaminopimelate decarboxylase [Neisseria meningitidis M01-240149] gi|325207366|gb|ADZ02818.1| diaminopimelate decarboxylase [Neisseria meningitidis NZ-05/33] Length = 414 Score = 285 bits (730), Expect = 8e-75, Method: Composition-based stats. Identities = 175/404 (43%), Positives = 245/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDATKTIFSGVGKNEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDE-NV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G+++ +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVDGNEYRLIRRRETLEQQMANE 402 >gi|167564379|ref|ZP_02357295.1| diaminopimelate decarboxylase [Burkholderia oklahomensis EO147] gi|167571526|ref|ZP_02364400.1| diaminopimelate decarboxylase [Burkholderia oklahomensis C6786] Length = 423 Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats. Identities = 179/419 (42%), Positives = 247/419 (58%), Gaps = 5/419 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G+LHAE V+ +LA TP + YS A+ Y ++ A G V A+KAN Sbjct: 5 AFDYVDGTLHAERVAAAELAERFGTPLFVYSRAALTAAYDAYAKACAGRRASVHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN V+ A LG+G DIVS GEL R LAA A+ +VFSGVGK+ DE+ AL++G+ CF Sbjct: 65 SNLGVLNVFARLGAGFDIVSGGELARVLAAGGRAQNVVFSGVGKSADEMRAALEAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A SLGK+AP++ RVNPD++ TH ISTG K +KFGI + + Y Sbjct: 125 NVESTPELDRLNAVAASLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGIAFDEARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LP + + G+D HIGSQI ++ + A L DL +Q+ ++G I H+DVGGGLGI Sbjct: 185 RAAAALPNLDVVGIDCHIGSQITELSPYLDAIDKLLDLVEQIEADGVKIHHVDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G+ +I EPGR L + GIL+T+V +K+ +K Sbjct: 245 TYDDETPPDIGAYVRAVLERIDARGHGHREIWFEPGRSLTGNAGILLTRVEFLKQGDEKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y+ V P D D+VGP+CE+GD++ R +A Sbjct: 305 FAIVDAAMNDLARPAMYE-AFHAIEPVKPRTDIATAVYDVVGPVCESGDWLGRERSLA-I 362 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 PGDLL I GAYG S YN+R E++V+G+ +++RPR T + L E + +P Sbjct: 363 APGDLLAIRSAGAYGFTMSSNYNTRPRAAEVIVDGANAYLVRPRETVESLFERESVLPG 421 >gi|126453755|ref|YP_001067996.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1106a] gi|167847626|ref|ZP_02473134.1| diaminopimelate decarboxylase [Burkholderia pseudomallei B7210] gi|242316004|ref|ZP_04815020.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1106b] gi|126227397|gb|ABN90937.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1106a] gi|242139243|gb|EES25645.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1106b] Length = 423 Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats. Identities = 181/416 (43%), Positives = 247/416 (59%), Gaps = 4/416 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G+LHAE VS +LA TP + YS A+ Y ++ A G + A+KAN Sbjct: 5 AFDYVDGALHAERVSTVELAERFGTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN V+ A LG+G DIVS GEL R LAA A +VFSGVGK+ DE+ +AL++G+ CF Sbjct: 65 SNLGVLNVFARLGAGFDIVSGGELARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A SLGK+AP++ RVNPD++ TH ISTG K +KFGI + Y Sbjct: 125 NVESIPELDRLNAVAASLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LP +++ G+D HIGSQI ++ + A L DL +++ ++G I H+DVGGGLGI Sbjct: 185 RAAAALPNLEVVGIDCHIGSQITELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G+ Q +I EPGR L + GIL+T+V +K+ +K Sbjct: 245 TYDDETPPDIGAYVRAVLARIDARGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y V P D DIVGP+CE+GD++ R +A Sbjct: 305 FAIVDAAMNDLARPAMYQ-AFHAIVPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-I 362 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL I GAYG S YN+R E++V+G+ H++RPR T + L E ++I Sbjct: 363 APGDLLAIRSAGAYGFTMSSNYNTRPRAAEVIVDGANAHLVRPRETVESLFEHETI 418 >gi|325133435|gb|EGC56099.1| diaminopimelate decarboxylase [Neisseria meningitidis M13399] Length = 406 Score = 285 bits (729), Expect = 9e-75, Method: Composition-based stats. Identities = 174/404 (43%), Positives = 245/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y + + P Sbjct: 123 DRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALKAYRHVAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L QL G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILVLVDQLADEGIVLEHLDLGGGVGIVYQDE-NV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGALLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + + + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--PKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G+++ +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVDGNEYRLIRRRETLEQQMANE 402 >gi|254670860|emb|CBA07331.1| Diaminopimelate decarboxylase [Neisseria meningitidis alpha153] Length = 406 Score = 285 bits (729), Expect = 9e-75, Method: Composition-based stats. Identities = 174/404 (43%), Positives = 244/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEEFGTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELVRVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAERLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDTLVAEGIVLEHLDLGGGVGIVYQDE-SV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + + + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKNIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVDGGGYRLIRRRETLEQQMANE 402 >gi|296314185|ref|ZP_06864126.1| diaminopimelate decarboxylase [Neisseria polysaccharea ATCC 43768] gi|296839164|gb|EFH23102.1| diaminopimelate decarboxylase [Neisseria polysaccharea ATCC 43768] Length = 406 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 175/404 (43%), Positives = 245/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDE-NV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVDGDGYKLIRRRETLEQQMANE 402 >gi|288918854|ref|ZP_06413198.1| diaminopimelate decarboxylase [Frankia sp. EUN1f] gi|288349706|gb|EFC83939.1| diaminopimelate decarboxylase [Frankia sp. EUN1f] Length = 439 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 140/432 (32%), Positives = 231/432 (53%), Gaps = 15/432 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F + +G+L E L ++A TP Y YS + + +Y+ F+ AF+ +D ++C++ K Sbjct: 1 MDEFSFRDGTLWCEQTPLREVAEKFGTPTYVYSASTLVDHYVRFAKAFESIDPLICFSAK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SN +++ L G+G+D VS GEL RAL A V ERIV +GVGK+ DE+ A++ I Sbjct: 61 ALSNVHLLRILGDQGAGIDTVSGGELHRALLAGVDPERIVLAGVGKSADELREAVRRDIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI--NANTHKKISTGKKEDKFGIPIHQI 178 C NVESE E+ L + A G + +A RVNPDI + T + +T + KFG+ I + Sbjct: 121 CINVESEEEVALLARIAREEGGRPRLAIRVNPDIAPDLRTPARTTTAVRGVKFGVDIERA 180 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 +L++ A+ ++ G+ +HIGS I + + A + + L + + G+ + I++GG Sbjct: 181 AALFSRAAGDGFLRPEGIHVHIGSPIFDPQVYAMAIERVLALVADIEAAGNPVTTINLGG 240 Query: 239 GLGIAYHS--DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 G Y +D + F + +II EPGR + A+ G+L+ V K++ Sbjct: 241 GFPAEYTEGSAPGWDEFADAICPRLEGFVHRGGQIIFEPGRTIAANAGVLLAAVRYRKQA 300 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH----------IHADIVGPICE 346 ++ V++D M R +YD+YH + + G + D+VGPICE Sbjct: 301 GERELVVIDAGMTHIARAAMYDSYHFMWPVSPVNGAIPRSRDQKSVDDLVAYDVVGPICE 360 Query: 347 TGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 + D++A R + GDL+ I GAYG + YNS+L E++V G++ ++R R T Sbjct: 361 SSDYLAKGRALPAMVAGDLVAIFTAGAYGMTMTSNYNSQLRPAEVLVRGAEAKLVRRRET 420 Query: 407 FQELIELDSIPA 418 + +L+ L+ P Sbjct: 421 YDDLVALE-FPD 431 >gi|254198509|ref|ZP_04904930.1| diaminopimelate decarboxylase [Burkholderia pseudomallei S13] gi|169655249|gb|EDS87942.1| diaminopimelate decarboxylase [Burkholderia pseudomallei S13] Length = 423 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 181/416 (43%), Positives = 246/416 (59%), Gaps = 4/416 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G+LHAE VS LA TP + YS A+ Y ++ A G + A+KAN Sbjct: 5 AFDYVDGTLHAERVSTIDLAERFGTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN V+ A LG+G DIVS GEL R LAA A +VFSGVGK+ DE+ +AL++G+ CF Sbjct: 65 SNLGVLNVFARLGAGFDIVSGGELARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A SLGK+AP++ RVNPD++ TH ISTG K +KFGI + Y Sbjct: 125 NVESIPELDRLNAVAASLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LP +++ G+D HIGSQI ++ + A L DL +++ ++G I H+DVGGGLGI Sbjct: 185 RAAAALPNLEVVGIDCHIGSQITELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G+ Q +I EPGR L + GIL+T+V +K+ +K Sbjct: 245 TYDDETPPDIGAYVRAVLARIDARGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y V P D DIVGP+CE+GD++ R +A Sbjct: 305 FAIVDAAMNDLARPAMYQ-AFHAIVPVAPRTDVAAAVYDIVGPVCESGDWLGRERLLA-I 362 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL I GAYG S YN+R E++V+G+ H++RPR T + L E ++I Sbjct: 363 APGDLLAIRSAGAYGFTMSSNYNTRPRAAEVIVDGANAHLVRPRETVESLFEHETI 418 >gi|325266603|ref|ZP_08133280.1| diaminopimelate decarboxylase [Kingella denitrificans ATCC 33394] gi|324982046|gb|EGC17681.1| diaminopimelate decarboxylase [Kingella denitrificans ATCC 33394] Length = 407 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 170/404 (42%), Positives = 247/404 (61%), Gaps = 3/404 (0%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 EN+ +LA TP Y YS + + Y + AF ++ ++CYA+KANSN ++I+ Sbjct: 3 TIENIEFGQLAAQFGTPLYVYSENELTQAYARYQTAFVALNPLICYAVKANSNLSIIRHF 62 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 A LGSG D VS GE+ R LAA A++I+FSGVGK+ EI+ AL +GI CFNVES EL Sbjct: 63 ARLGSGFDTVSGGEIARVLAAGGSADKIIFSGVGKSEVEIEFALNAGIKCFNVESLPELD 122 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 +N A LGK AP++ R+NPD++A TH ISTG K +KFGI + Y +A +L + Sbjct: 123 RINAVAQRLGKTAPVSLRINPDVDAKTHPYISTGLKANKFGIAMADAEQAYRHAGSLHHL 182 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 +I G+D HIGSQ+ + +A + L LT +L G ++HID+GGG+GIAY + + P Sbjct: 183 RIVGIDCHIGSQLMDLSPLIEACERLLQLTDRLAGQGIVLEHIDLGGGIGIAYQ-NEQSP 241 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + YA+ + ++LEPGR LV + G L+T+V +K+ +K FVI+D AMND Sbjct: 242 DLAAYAAAVQTLLAGRPQSLVLEPGRSLVGNAGTLLTRVEYVKRGEEKNFVIVDAAMNDL 301 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 MRP LY + + + ADIVGPICETGDF+A +R I+ + GDLL + Sbjct: 302 MRPALYQ-AYHNIENAETSERQPVFLADIVGPICETGDFLARDRMIS-AQAGDLLLVRSA 359 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY + + YN+R E++V+G + +IRPR T++++ + Sbjct: 360 GAYASSMASNYNTRGRAAEVLVSGDKVRLIRPRETWEDVFASEK 403 >gi|148555770|ref|YP_001263352.1| diaminopimelate decarboxylase [Sphingomonas wittichii RW1] gi|148500960|gb|ABQ69214.1| diaminopimelate decarboxylase [Sphingomonas wittichii RW1] Length = 423 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 185/426 (43%), Positives = 264/426 (61%), Gaps = 9/426 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-----DTMV 55 M F +G LHAE+V+L +A V TP Y YST IE++ F A + ++ Sbjct: 1 MDHFNLKDGVLHAEDVALPAIAEAVGTPVYVYSTATIERHVAVFKAALAAVESGPEGPLI 60 Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 +A+KAN N+AV+ TLA G G D+VS GEL RA AA +PA++IVFSGVGKT E+ L L Sbjct: 61 AFAVKANPNRAVLATLARAGLGADVVSGGELLRARAAGIPADKIVFSGVGKTEAEMRLGL 120 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 + GI+ FN+ESE E + L++ A + G++AP+AFR+NP++ A TH KISTG EDKFG+ Sbjct: 121 EQGIFQFNIESEPEAEMLSEVAAATGRRAPVAFRINPNVIAGTHAKISTGGSEDKFGVAY 180 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 + + YA A+ LPG+ + GV +HIGSQ+ + AF+ + L +LR+ GH I D Sbjct: 181 DRAIAAYARAAELPGLDVRGVAVHIGSQLTDLGPSRAAFEKIGALIAELRAAGHRIVTAD 240 Query: 236 VGGGLGIAYHSDHRPPS-SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 +GGGLG+ Y P Y +++ + +++ EPGR +V + G+L+++VI +K Sbjct: 241 LGGGLGVPYDPAKPVPPLPDAYGAMVREVTAGWNTRLVFEPGRVIVGNAGVLLSRVIRVK 300 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 FVI+D AMND MRP+LYDA+H+I + + A+IVGPICE+GD A Sbjct: 301 PGVTDPFVIVDAAMNDLMRPSLYDAWHDIR---AVTPNGAAMTANIVGPICESGDSFAKK 357 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R + PGDL+ GAYGA + TYNSR L PE++VNG Q+ ++R R + LI D Sbjct: 358 RAMDAVGPGDLVTFMTAGAYGATMANTYNSRALTPEVLVNGDQWAVVRERQPIEALIAAD 417 Query: 415 SIPAWL 420 +P W+ Sbjct: 418 KLPPWV 423 >gi|237814107|ref|YP_002898558.1| diaminopimelate decarboxylase [Burkholderia pseudomallei MSHR346] gi|237505838|gb|ACQ98156.1| diaminopimelate decarboxylase [Burkholderia pseudomallei MSHR346] Length = 423 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 180/416 (43%), Positives = 246/416 (59%), Gaps = 4/416 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G+LHAE VS +LA TP + YS A+ Y ++ A G + A+KAN Sbjct: 5 AFDYVDGTLHAERVSTVELAERFGTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN V+ A LG+G DIVS GEL R LAA A +VFSGVGK+ DE+ +AL++G+ CF Sbjct: 65 SNLGVLNVFARLGAGFDIVSGGELARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A SLGK+AP++ RVNPD++ TH ISTG K +KFGI + Y Sbjct: 125 NVESIPELDRLNAVAASLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ P +++ G+D HIGSQI ++ + A L DL +++ ++G I H+DVGGGLGI Sbjct: 185 RAAAAQPNLEVVGIDCHIGSQITELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G+ Q +I EPGR L + GIL+T+V +K+ +K Sbjct: 245 TYDDETPPDIGAYVRAVLARIDARGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y V P D DIVGP+CE+GD++ R +A Sbjct: 305 FAIVDAAMNDLARPAMYQ-AFHAIVPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-I 362 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL I GAYG S YN+R E++V+G+ H++RPR T + L E ++I Sbjct: 363 APGDLLAIRSAGAYGFTMSSNYNTRPRAAEVIVDGANAHLVRPRETVESLFEHETI 418 >gi|167582586|ref|ZP_02375460.1| diaminopimelate decarboxylase [Burkholderia thailandensis TXDOH] Length = 423 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 178/419 (42%), Positives = 246/419 (58%), Gaps = 5/419 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G+LHAE V LA TP + YS A+ Y ++ A G + A+KAN Sbjct: 5 AFDYVDGTLHAERVCTADLAERFGTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN V+ A LG+G DIVS GEL R LAA A+ +VFSGVGK+ DE+ +AL++G+ CF Sbjct: 65 SNLGVLNVFARLGAGFDIVSGGELARVLAAGGRAQNVVFSGVGKSADEMRIALEAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A SLGK+AP++ RVNPD++ TH ISTG K +KFGI + Y Sbjct: 125 NVESIPELDRLNAVAASLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LP +++ G+D HIGSQI ++ + A L DL +Q+ ++G I H+DVGGGLGI Sbjct: 185 RAAAALPNLEVVGIDCHIGSQITELSPYLDAIDKLLDLVEQIEADGVKIHHVDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G+ +I EPGR L + GIL+T+V +K+ +K Sbjct: 245 TYDDETPPDIGAYVRAVLERIDARGHGHREIWFEPGRSLTGNAGILLTRVEFLKQGEEKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y V P D D+VGP+CE+GD++ +R +A Sbjct: 305 FAIVDAAMNDLARPAMYQ-AFHAIEPVTPRTDVAAAVYDVVGPVCESGDWLGRDRSLA-I 362 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 PGDLL I GAYG S YN+R E++V+G+ +++RPR T + L E + +P Sbjct: 363 APGDLLAIRSAGAYGFTMSSNYNTRPRAAEVIVDGASAYLVRPRETVESLFEREAVLPD 421 >gi|56476690|ref|YP_158279.1| diaminopimelate decarboxylase [Aromatoleum aromaticum EbN1] gi|56312733|emb|CAI07378.1| Diaminopimelate decarboxylase [Aromatoleum aromaticum EbN1] Length = 420 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 176/408 (43%), Positives = 250/408 (61%), Gaps = 5/408 (1%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E+V L +A TP Y YS A+E+ + + +A G +VCYA+KANSN V+ Sbjct: 17 LQIEDVPLAAIAERFGTPTYVYSRAALEQAFDAYRDALAGRRALVCYAVKANSNLGVLAV 76 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LG+G DIVS GEL R LAA ++VFSGVGK+ E+ AL +GI CFNVESE+EL Sbjct: 77 FAKLGAGFDIVSGGELSRVLAAGGDPGKVVFSGVGKSAGEMRQALAAGIRCFNVESEAEL 136 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + L+ A LG +APIA RVNPD++ TH ISTG K +KFG+ +LY A+ + Sbjct: 137 ERLDMLAGELGTRAPIALRVNPDVDPKTHPYISTGLKNNKFGVAFDTALALYRRAAGMAN 196 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 V+ISG+ HIGSQ+ +A + + L +L + G ++ HID+GGGLGI Y + P Sbjct: 197 VRISGIACHIGSQLLDSGPIAEAAEKVLGLVDELAAEGIHLDHIDLGGGLGIRYRDE-AP 255 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 PS + Y + + + ++ EPGR L+ + G+L+T++ +K A++ F I+D AMND Sbjct: 256 PSVAAYLAPLLRLLDGRSEELCFEPGRSLIGNAGLLLTRIEYLKPGAERNFAIVDAAMND 315 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 RP LYDAYHE + D + +IVGPICE+GDF+A +R +A GDL+ + Sbjct: 316 LARPALYDAYHEAVAVA--PRDVPERNYEIVGPICESGDFLAHDRPLA-VAAGDLVALLS 372 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS-IP 417 GAYG S YN+R E++V+GS+ H++R R T + L L+S +P Sbjct: 373 AGAYGMAMSSNYNTRPRAAEVIVDGSRMHLVRQRETVESLYALESPLP 420 >gi|51247766|pdb|1TWI|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase From M. Jannaschii In Co-Complex With L-Lysine gi|51247767|pdb|1TWI|B Chain B, Crystal Structure Of Diaminopimelate Decarboxylase From M. Jannaschii In Co-Complex With L-Lysine gi|51247768|pdb|1TWI|C Chain C, Crystal Structure Of Diaminopimelate Decarboxylase From M. Jannaschii In Co-Complex With L-Lysine gi|51247769|pdb|1TWI|D Chain D, Crystal Structure Of Diaminopimelate Decarboxylase From M. Jannaschii In Co-Complex With L-Lysine Length = 434 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 154/429 (35%), Positives = 231/429 (53%), Gaps = 16/429 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYA 58 + +G + +LA TP Y S I+ NY + AF G + +V YA Sbjct: 8 EIKDGRFFIDGYDAIELAEKFGTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYA 67 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KAN+N A+ + LA LG G D+VS GEL A + VP+++IVF+G KT +EI + +++ Sbjct: 68 YKANANLAITRLLAKLGCGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEAN 127 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I FNV+S SEL +N+ A LG+ A +AFR+NP++N TH KISTG K++KFG+ + Sbjct: 128 IRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESG 187 Query: 179 HSL--YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 ++ A + V + GV HIGSQ+ I F + + + D +L+ G I+ +++ Sbjct: 188 IAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNL 247 Query: 237 GGGLGIAYHSDHRPPSSSDYAS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 GGGLGI Y+ D + P+ D A ++ +ILEPGR LVA G L+ KV Sbjct: 248 GGGLGIPYYKDKQIPTQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVH 307 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK++ +V++D MND MRP +Y+AYH I N I G +CE+ D Sbjct: 308 HIKETPVTKWVMIDAGMNDMMRPAMYEAYHHII---NCKVKNEKEVVSIAGGLCESSDVF 364 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 +R++ GD+L I GAYG + YN+R ++ + +IR R T+ +LI Sbjct: 365 GRDRELDKVEVGDVLAIFDVGAYGISMANNYNARGRPRMVLTSKKGVFLIRERETYADLI 424 Query: 412 ELDSIPAWL 420 D +P L Sbjct: 425 AKDIVPPHL 433 >gi|15669285|ref|NP_248090.1| diaminopimelate decarboxylase LysA [Methanocaldococcus jannaschii DSM 2661] gi|2499349|sp|Q58497|DCDA_METJA RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|1591741|gb|AAB99100.1| diaminopimelate decarboxylase (lysA) [Methanocaldococcus jannaschii DSM 2661] Length = 438 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 154/429 (35%), Positives = 231/429 (53%), Gaps = 16/429 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYA 58 + +G + +LA TP Y S I+ NY + AF G + +V YA Sbjct: 12 EIKDGRFFIDGYDAIELAEKFGTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYA 71 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KAN+N A+ + LA LG G D+VS GEL A + VP+++IVF+G KT +EI + +++ Sbjct: 72 YKANANLAITRLLAKLGCGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEAN 131 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I FNV+S SEL +N+ A LG+ A +AFR+NP++N TH KISTG K++KFG+ + Sbjct: 132 IRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESG 191 Query: 179 HSL--YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 ++ A + V + GV HIGSQ+ I F + + + D +L+ G I+ +++ Sbjct: 192 IAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNL 251 Query: 237 GGGLGIAYHSDHRPPSSSDYAS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 GGGLGI Y+ D + P+ D A ++ +ILEPGR LVA G L+ KV Sbjct: 252 GGGLGIPYYKDKQIPTQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVH 311 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK++ +V++D MND MRP +Y+AYH I N I G +CE+ D Sbjct: 312 HIKETPVTKWVMIDAGMNDMMRPAMYEAYHHII---NCKVKNEKEVVSIAGGLCESSDVF 368 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 +R++ GD+L I GAYG + YN+R ++ + +IR R T+ +LI Sbjct: 369 GRDRELDKVEVGDVLAIFDVGAYGISMANNYNARGRPRMVLTSKKGVFLIRERETYADLI 428 Query: 412 ELDSIPAWL 420 D +P L Sbjct: 429 AKDIVPPHL 437 >gi|152990136|ref|YP_001355858.1| diaminopimelate decarboxylase [Nitratiruptor sp. SB155-2] gi|151421997|dbj|BAF69501.1| diaminopimelate decarboxylase [Nitratiruptor sp. SB155-2] Length = 400 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 163/396 (41%), Positives = 235/396 (59%), Gaps = 4/396 (1%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA TP Y Y + KNY AF +++ YA+KANSN +++K LA LGSG D Sbjct: 5 ALAQKYDTPLYVYDFNEVAKNYEAIKEAFKARKSIIAYAVKANSNMSLLKHLAELGSGAD 64 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 VS GE++RAL A +P +I+FSGVGK DEI+ AL I N+ESE+E + + A Sbjct: 65 CVSIGEVKRALLAGIPNYKIIFSGVGKRDDEIEEALLKDILYINIESEAETYRVEEIAKK 124 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 LGK A ++FRVNP+I+ TH ISTG E+KFG+ I LY YA P + + H Sbjct: 125 LGKVARVSFRVNPNIDPKTHPYISTGLHENKFGVEIETAKKLYLYAKNSPFINPVAIHFH 184 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 IGSQ+ ++E +A ++ DL + L+ +I+ DVGGGLGI Y + DYA Sbjct: 185 IGSQLTELEPIKEASAIVADLVRSLQKLDIDIKFFDVGGGLGIRYKDEKTI-EPYDYAQA 243 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 I I+ EPGR++V + G+ +TKV+ K+S K FVI+D AMND +RP+LY+A Sbjct: 244 ILSTLRGTDMTIVCEPGRYIVGNAGVFLTKVLYEKQSDKKRFVIVDGAMNDLLRPSLYNA 303 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 YHE+ + + AD+VGP+CE+GDF+A NR + + GD++ ++ GAYG V + Sbjct: 304 YHEVEVVGKSGNES---LADVVGPVCESGDFLAKNRMLPPTKHGDVIVVKSAGAYGFVMA 360 Query: 380 GTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 YN+R E+ + + +IR R +F+ +IE + Sbjct: 361 SNYNTRPRPAEVAIENGEDRLIRERESFEYIIEKEI 396 >gi|76810164|ref|YP_335101.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710b] gi|167740511|ref|ZP_02413285.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 14] gi|167904581|ref|ZP_02491786.1| diaminopimelate decarboxylase [Burkholderia pseudomallei NCTC 13177] gi|167912845|ref|ZP_02499936.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 112] gi|254190340|ref|ZP_04896848.1| diaminopimelate decarboxylase [Burkholderia pseudomallei Pasteur 52237] gi|254258974|ref|ZP_04950028.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710a] gi|76579617|gb|ABA49092.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710b] gi|157938016|gb|EDO93686.1| diaminopimelate decarboxylase [Burkholderia pseudomallei Pasteur 52237] gi|254217663|gb|EET07047.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710a] Length = 423 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 181/416 (43%), Positives = 246/416 (59%), Gaps = 4/416 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G+LHAE VS LA TP + YS A+ Y ++ A G + A+KAN Sbjct: 5 AFDYVDGTLHAERVSTIDLAERFGTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN V+ A LG+G DIVS GEL R LAA A +VFSGVGK+ DE+ +AL++G+ CF Sbjct: 65 SNLGVLNVFARLGAGFDIVSGGELARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A SLGK+AP++ RVNPD++ TH ISTG K +KFGI + Y Sbjct: 125 NVESIPELDRLNAVAASLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LP +++ G+D HIGSQI ++ + A L DL +++ ++G I H+DVGGGLGI Sbjct: 185 RAAAALPNLEVVGIDCHIGSQITELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G+ Q +I EPGR L + GIL+T+V +K+ +K Sbjct: 245 TYDDETPPDIGAYVRAVLARIDARGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y V P D DIVGP+CE+GD++ R +A Sbjct: 305 FAIVDAAMNDLARPAMYQ-AFHAIVPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-I 362 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PGDLL I GAYG S YN+R E++V+G+ H++RPR T + L E ++I Sbjct: 363 APGDLLAIRSAGAYGFTMSSNYNTRPRAAEVIVDGANAHLVRPRETVESLFEHETI 418 >gi|238025969|ref|YP_002910200.1| Diaminopimelate decarboxylase [Burkholderia glumae BGR1] gi|237875163|gb|ACR27496.1| Diaminopimelate decarboxylase [Burkholderia glumae BGR1] Length = 423 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 173/423 (40%), Positives = 244/423 (57%), Gaps = 7/423 (1%) Query: 1 MSA--FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA 58 M+ F Y +G+LHAE + +KLA TP Y YS A+ Y ++ A +G + A Sbjct: 1 MTHRAFDYVDGTLHAEGIPADKLADHFDTPLYVYSRAALTAAYQAYAKACEGRRASLHVA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KANSN V+ A LG+G DIVS GEL R LAA AE +VFSGV K+ DE+ LAL++G Sbjct: 61 VKANSNLGVLNVFARLGAGFDIVSGGELARVLAAGGKAEHVVFSGVAKSADEMRLALEAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + CFNVES EL LN A SLGK+AP++ RVNPD++ TH ISTG K +KFG+ Sbjct: 121 VKCFNVESVPELDRLNAVAGSLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGVAFADA 180 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + Y A LP ++++G+D HIGSQI ++ + A + DL +Q+ ++G I H+DVGG Sbjct: 181 RATYRAADALPNLQVAGIDCHIGSQITELSPYLDALDKVLDLVEQIEADGIAIHHVDVGG 240 Query: 239 GLGIAYHSDHRPPSSSDYASLIH--QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 GLGI Y + P + +L G+ ++ EPGR L + GIL+T+V +K Sbjct: 241 GLGITYADETPPDIGAFVQALFAKLDARGHGHRELCFEPGRSLTGNAGILLTRVEFLKPG 300 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +K F I+D MND RP +Y+ + V D+VGP+CE+GD++ R Sbjct: 301 EEKNFAIVDAGMNDLARPAMYE-AYHAIVPVRQTSAHASAVYDVVGPVCESGDWLGRERT 359 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-S 415 +A GDLL I GAYG S YN+R E++V+G +++R R T L E + Sbjct: 360 LA-IAAGDLLAIRSAGAYGFAMSSNYNTRPRAAEVLVDGQNAYLVRQRETIASLYENEAI 418 Query: 416 IPA 418 +P Sbjct: 419 LPE 421 >gi|298675499|ref|YP_003727249.1| diaminopimelate decarboxylase [Methanohalobium evestigatum Z-7303] gi|298288487|gb|ADI74453.1| diaminopimelate decarboxylase [Methanohalobium evestigatum Z-7303] Length = 426 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 158/424 (37%), Positives = 225/424 (53%), Gaps = 11/424 (2%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + + L V L + +P Y + I N+ + AF D + YA KA Sbjct: 6 NHLEIENSRLTIGGVDTSNLVNEYGSPIYVTNEQRIRDNFRRYKKAFP--DADLFYAAKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N N ++K LA G+G D+ S+GEL AL A +P ++I+F+G K+ E+ +A+Q+G+ Sbjct: 64 NGNLTILKILAEEGAGADVFSDGELYTALLAGIPRDKILFNGNSKSDRELLMAVQTGVR- 122 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 +V+S EL TL+ A + GK IAFRVNPD++ TH KISTG K KFGIP ++ S Sbjct: 123 VSVDSFDELNTLSSIAKNEGKVVDIAFRVNPDVSPKTHPKISTGLKTSKFGIPHDEVVSA 182 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A PGV G+ HIGSQI ++E F + + DL +Q+ G + +D+G GLG Sbjct: 183 YKQALDKPGVNPVGIHCHIGSQILEVEPFVETVNKMMDLVEQISRLGVEFEFVDIGSGLG 242 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGILVTKVISIKK 295 I Y + P+ +D A I F K++LEPGR+LV D IL+T V ++K Sbjct: 243 IPYEKNIEVPTPNDLADSIVPIFNERCKAEGINPKLVLEPGRYLVGDSAILLTSVNTMKN 302 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +A K FV +D N +RP +YDAYH N A IVGPICETGD +A +R Sbjct: 303 AA-KKFVGIDAGFNTMIRPVMYDAYHHAVV-ANKADKNAEDTYTIVGPICETGDIMATDR 360 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ GD++ G YG S YN R E++VN IIR T+ +L+ Sbjct: 361 ELPEIEKGDVIAFLDVGGYGFSMSSQYNGRPRCAELLVNKGDVDIIRKAETYADLLANQE 420 Query: 416 IPAW 419 +P Sbjct: 421 VPPR 424 >gi|330507768|ref|YP_004384196.1| diaminopimelate decarboxylase [Methanosaeta concilii GP-6] gi|328928576|gb|AEB68378.1| diaminopimelate decarboxylase [Methanosaeta concilii GP-6] Length = 427 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 153/425 (36%), Positives = 222/425 (52%), Gaps = 11/425 (2%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + L+ E+V +LA TP Y S + +N + AF D +A+KA Sbjct: 6 DHLTTIDNHLYIEDVDCCRLAAEEGTPLYVTSERRLRENIRRYHRAFP--DAEKYFAVKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N N A+++ A G G DI S GEL A +P + I+F+G K+ + ALQ+G+ Sbjct: 64 NGNLAILQVAAQEGMGADIFSAGELSLVRLAGIPRDMILFNGNSKSEKDHIAALQAGVR- 122 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 +V+S EL+ L + A +L +A I FRVNP+++ TH KI+TG + KFGIP Q+ Sbjct: 123 ISVDSNEELEHLARTARNLDSEAEILFRVNPNVSPKTHPKIATGLRSSKFGIPAEQVAGT 182 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A L G+K G+ HIGSQI F +A + D+T+ + + G N++ ID+GGGLG Sbjct: 183 YKRAMELEGIKPVGLHCHIGSQILDTAPFAEAAGRMMDITRAVVAEGGNVERIDLGGGLG 242 Query: 242 IAYHSDHRPPSSSDYA------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 I Y D P SD A + ++ILEPGR +VAD I++T V + K Sbjct: 243 IQYQPDSTAPLPSDLAKAVLPVIQDSCRDMGIFPQLILEPGRSIVADSTIMLTGVN-VVK 301 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 A FV +D N RP LYD+YH N A ++ IVGPICETGD +A +R Sbjct: 302 RAHVNFVAVDAGFNVLARPMLYDSYHH-VLAANRAEEQGEETYTIVGPICETGDVLARDR 360 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ GD L GAYG + YN + E++V+ ++ +IR R L+ + Sbjct: 361 RLPRLVRGDTLAFLDAGAYGFSMASQYNGQPRPAEVLVSEDRWELIRHREDESALLAGQT 420 Query: 416 IPAWL 420 IP+ L Sbjct: 421 IPSRL 425 >gi|240013231|ref|ZP_04720144.1| hypothetical protein NgonD_01030 [Neisseria gonorrhoeae DGI18] gi|240015677|ref|ZP_04722217.1| hypothetical protein NgonFA_00668 [Neisseria gonorrhoeae FA6140] gi|240120302|ref|ZP_04733264.1| hypothetical protein NgonPI_00705 [Neisseria gonorrhoeae PID24-1] Length = 406 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 176/404 (43%), Positives = 246/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V+ +LA TP Y YS +A+ + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVAYPRLAEEFGTPLYVYSQSALTGAFENYQTAFAALNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKIAARLGKTAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDE-GV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYARAVQKLMGTRRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + + L A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVETKNIEPL--TANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNTRNRAAEVLVDGGGYKLIRRRETLEQQMANE 402 >gi|313669199|ref|YP_004049483.1| diaminopimelate decarboxylase [Neisseria lactamica ST-640] gi|313006661|emb|CBN88127.1| diaminopimelate decarboxylase [Neisseria lactamica 020-06] Length = 406 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 176/404 (43%), Positives = 246/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYRDE-NV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIESVE--TKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+GS + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVDGSGYKLIRRRETLEQQMANE 402 >gi|224418942|ref|ZP_03656948.1| diaminopimelate decarboxylase [Helicobacter canadensis MIT 98-5491] gi|253827889|ref|ZP_04870774.1| diaminopimelate decarboxylase [Helicobacter canadensis MIT 98-5491] gi|253511295|gb|EES89954.1| diaminopimelate decarboxylase [Helicobacter canadensis MIT 98-5491] Length = 418 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 165/398 (41%), Positives = 241/398 (60%), Gaps = 3/398 (0%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L ++A QTP + Y IE+ + F AF G +++CYALKANSN +VIK LA L SG Sbjct: 21 LLQVAKEYQTPLFVYDFDKIEEYFNQFKLAFSGRKSLICYALKANSNLSVIKKLASLESG 80 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE++RA+ A +P +I++SGVGK EI A++ GI N+ES+ EL + A Sbjct: 81 VDCVSLGEIKRAILAGIPTYKIIYSGVGKQDYEIQEAIKLGILFINIESKEELLKVESIA 140 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 +L KA I+ RVNPDI+ TH ISTG KE+KFGI + + SLY YA ++ G+ Sbjct: 141 KTLNTKARISIRVNPDIDPQTHPYISTGLKENKFGIGVEEAKSLYLYAHKSESLEPIGIH 200 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 HIGSQI +++ ++ + + L L + +I+ D+GGGLGI Y + + DYA Sbjct: 201 FHIGSQITKLQPIAESAQKIAQLLHSLLALKIDIKFFDIGGGLGITYKDETTI-NPYDYA 259 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 I + L II EPGRF++ + G+ +T+V+ K S +K FVI++ AMND +RP+LY Sbjct: 260 QSILECLRGLDVTIICEPGRFIMGNSGVFLTQVLYEKISQEKRFVIVNGAMNDLIRPSLY 319 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 +AYH+I + + DIVGPICE+GD++ N + + GD+L I GAYG Sbjct: 320 NAYHKITPL--NPREGELAPTDIVGPICESGDYLGKNIALPPLKAGDILAILSAGAYGFS 377 Query: 378 QSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 S YN+R E+ ++ + +IR R TF++LI L+ Sbjct: 378 MSSNYNTRPRCAEVAISQGKARLIRKRETFEDLIALEK 415 >gi|240112021|ref|ZP_04726511.1| hypothetical protein NgonM_00270 [Neisseria gonorrhoeae MS11] gi|254492827|ref|ZP_05105998.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae 1291] gi|268598074|ref|ZP_06132241.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae MS11] gi|226511867|gb|EEH61212.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae 1291] gi|268582205|gb|EEZ46881.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae MS11] Length = 406 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 175/404 (43%), Positives = 244/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEEFGTPLYVYSQSALTGAFENYQTAFAALNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A GSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASFGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKIAARLGKTAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDE-GV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYARAVQKLMGTRRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + + L A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVETKNIEPL--TANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNTRNRAAEVLVDGGGYKLIRRRETLEQQMANE 402 >gi|218767449|ref|YP_002341961.1| diaminopimelate decarboxylase [Neisseria meningitidis Z2491] gi|13124075|sp|Q9JWA6|DCDA_NEIMA RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|121051457|emb|CAM07750.1| diaminopimelate decarboxylase [Neisseria meningitidis Z2491] Length = 406 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 174/404 (43%), Positives = 246/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDE-DV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGALLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + + + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--PKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G+++ +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVDGNEYRLIRRRETLEQQMANE 402 >gi|325141466|gb|EGC63940.1| diaminopimelate decarboxylase [Neisseria meningitidis 961-5945] gi|325199068|gb|ADY94524.1| diaminopimelate decarboxylase [Neisseria meningitidis G2136] Length = 414 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 176/404 (43%), Positives = 245/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ R+NPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAAHLGKTAPVSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDE-DV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++VNG + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVNGGGYKLIRRRETLEQQMANE 402 >gi|254674321|emb|CBA10105.1| Diaminopimelate decarboxylase [Neisseria meningitidis alpha275] Length = 406 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 176/404 (43%), Positives = 245/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ R+NPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAAHLGKTAPVSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDE-DV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++VNG + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVNGGGYKLIRRRETLEQQMANE 402 >gi|308390075|gb|ADO32395.1| diaminopimelate decarboxylase [Neisseria meningitidis alpha710] Length = 414 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 177/404 (43%), Positives = 246/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEEFGTPLYVYSKSALTEAFENYQTAFATLNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS+GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSDGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ RVNPD++A TH ISTG K +KFGI Y +AS Sbjct: 123 DRIQKVAARLGKVAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHASRQSH 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L QL G ++H+D+GGG+GI Y + Sbjct: 183 LKIVGIDCHIGSQLTDLSPLVEACERILVLVDQLADEGIVLEHLDLGGGVGIVYQDE-NV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + + + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--PKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++VNG + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVNGGGYKLIRRRETLEQQMANE 402 >gi|304316110|ref|YP_003851255.1| diaminopimelate decarboxylase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777612|gb|ADL68171.1| diaminopimelate decarboxylase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 445 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 117/431 (27%), Positives = 184/431 (42%), Gaps = 12/431 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQ 65 +G L K+A TP Y + +N +F N F V YA KA Sbjct: 11 KGHLEIAGCDTVKIAKQYGTPLYVIDEEQLRENCRSFYNGFKRNYPGNEVIYASKAFMTT 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ K + GLD+VS GEL AL A P + I F G K+ DE+ +AL+ I C V+ Sbjct: 71 AICKIIEEENLGLDVVSGGELYTALKADFPVKNIYFHGNNKSADELTMALEYNIGCIIVD 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYA 183 + EL LN+ A +GKK I RV+P + A+TH+ I TG+ + KFG P+ Sbjct: 131 NWFELNMLNELAFKMGKKPNIYLRVSPGVEAHTHEYIKTGQIDSKFGFPLFNGDALDAIK 190 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 YA TL V ++G+ HIGSQI +S+ ++ + ++++ + GG Sbjct: 191 YALTLDNVNLTGLHCHIGSQIFSYDSYKAEIDIMMNFLKKVKDHTGWEVGELDLGGGFGI 250 Query: 244 YHSDHRPPSSSDYASLIHQYF--------GNLQCKIILEPGRFLVADVGILVTKVISIKK 295 + + P + + II+EPGR ++ + G + V +IK Sbjct: 251 AYVEEDDPQPIELIANEIMKSVEEYSRNLNIKMPHIIVEPGRSIIGNAGTTLYTVGAIKN 310 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + T + N A I G CE+GD + + Sbjct: 311 IPGVRKYVSVDGGMADNIRTALYGAKYNAIVANKARKINLEKVSIAGKCCESGDMLIWDI 370 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ GD++ + TGAY + YN ++VN + +I R T+++L+ D Sbjct: 371 ELPQLESGDIIAVTCTGAYNYSMASNYNRLPRPAAVLVNNGESDLIVARETYEDLVRNDV 430 Query: 416 IPAWLQKTPKQ 426 IP L K+ Sbjct: 431 IPQRLLNENKK 441 >gi|225076892|ref|ZP_03720091.1| hypothetical protein NEIFLAOT_01943 [Neisseria flavescens NRL30031/H210] gi|224951778|gb|EEG32987.1| hypothetical protein NEIFLAOT_01943 [Neisseria flavescens NRL30031/H210] Length = 406 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 175/404 (43%), Positives = 246/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEEFGTPLYVYSQSALTEAFEHYQTAFATLNPLVCYAVKANGNLSIIKY 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAERLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIVGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDE-NV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYARAVQKLIGTRRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYG+ + YN+R E++V+GS+ +IR R T ++ + + Sbjct: 359 AGAYGSSMASNYNTRNRAAEVLVDGSECKLIRQRETVEQQMANE 402 >gi|325206881|gb|ADZ02334.1| diaminopimelate decarboxylase [Neisseria meningitidis M04-240196] Length = 406 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 175/404 (43%), Positives = 246/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELVRVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ R+NPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAARLGKTAPVSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLIEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDE-SV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + L A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVETKNISPL--TANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G+++ +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVDGNEYRLIRRRETLEQQMANE 402 >gi|296536745|ref|ZP_06898801.1| diaminopimelate decarboxylase [Roseomonas cervicalis ATCC 49957] gi|296262912|gb|EFH09481.1| diaminopimelate decarboxylase [Roseomonas cervicalis ATCC 49957] Length = 447 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 170/421 (40%), Positives = 240/421 (57%), Gaps = 5/421 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALK 60 + +G L E V L ++A V TP + YS + + Y +A G D + YA K Sbjct: 27 SLHAHDG-LLMEEVPLARIAREVGTPTWVYSANTLRRRYRALRDALRGAGLDASIHYATK 85 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN NQAV++ L G+G DIVS GELR +AA +PA VFSGVGK +EI AL GI+ Sbjct: 86 ANDNQAVLRVLGAEGAGADIVSMGELRATMAAGIPAGATVFSGVGKKPEEIRFALAQGIF 145 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 N ES E+ + A LG +AP+A RVNPD++A TH KI+TGK E+KFGI Sbjct: 146 QLNAESVEEIDMIAAIAAELGVRAPVALRVNPDVDAKTHAKITTGKAENKFGIAYEDALP 205 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIE-SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 LYA + LP ++ G+ HIGSQI + F A+ L ++ + +R+ G I+ +D GGG Sbjct: 206 LYARMAALPAIRPIGIATHIGSQITEGVAPFRAAYARLAEMVRAIRAQGLPIERVDCGGG 265 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LGI Y + PP A I G L ++LEPGR++ G+L+ ++ K+ + Sbjct: 266 LGIPYRDEVAPPPE-ALAGAIQATLGGLGLPVMLEPGRWIAGPAGVLLASIVLQKQGRGR 324 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F++ D AMND +RP +Y+A+H I + ADIVGP+CE+GD A R + Sbjct: 325 RFLVADAAMNDLVRPAMYEAWHGILPLDPKRHAAPLAPADIVGPVCESGDTFARGRAMPD 384 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGD + GAYGAV S TYN+R L E++V+G + ++RPR T ++L+ +P W Sbjct: 385 MAPGDFIAFLDAGAYGAVMSSTYNARPLAAEVLVDGHRHAVVRPRQTPEDLLAHQRLPEW 444 Query: 420 L 420 L Sbjct: 445 L 445 >gi|295677895|ref|YP_003606419.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1002] gi|295437738|gb|ADG16908.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1002] Length = 420 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 180/418 (43%), Positives = 247/418 (59%), Gaps = 6/418 (1%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F Y +G LHAE VS LA TP Y YS A+ + ++ A G V A+KANS Sbjct: 6 FDYVDGVLHAEGVSAVSLAEQFGTPLYVYSRAALTAAWNAYAGACAGRRASVHVAVKANS 65 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N AV+ A LG+G DIVS GEL R LAA AE VFSGVGK E+ AL +G+ CFN Sbjct: 66 NLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKQASEMRDALVAGVKCFN 125 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 VES EL LN A +GKKAP++ RVNPD++A TH ISTG K +KFG+ + Y Sbjct: 126 VESIPELDRLNAVAGEMGKKAPVSLRVNPDVDAKTHPYISTGLKTNKFGVAFEDARATYQ 185 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A+ + +++ G+D HIGSQI ++ + A + +L +Q+ +G +I+HIDVGGGLGI Sbjct: 186 AAAAMANLEVVGIDCHIGSQITEVAPYLDAIDKVLELVEQIEQDGVSIRHIDVGGGLGIT 245 Query: 244 YHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 Y + P + + G+ ++ EPGR LV + G+L+T++ +K DK F Sbjct: 246 YDDETPPEIGEFVRTVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRLEFLKPGEDKNF 305 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 I+D AM D RP +YDAYH I +V D D+VGP+CE+GD++ R +A Sbjct: 306 AIVDAAMTDLARPAMYDAYHAIEPVVKR--DVPAHVYDVVGPVCESGDWLGRERLLA-VE 362 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 PGDLL I GAYG V S YN+R E+MV+G+Q H++R R ++L + ++PA Sbjct: 363 PGDLLAIRSAGAYGFVMSSNYNTRARAAEVMVDGTQAHVVRAREEVKQLFAGETTLPA 420 >gi|308069561|ref|YP_003871166.1| diaminopimelate decarboxylase [Paenibacillus polymyxa E681] gi|305858840|gb|ADM70628.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Paenibacillus polymyxa E681] Length = 455 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 134/428 (31%), Positives = 196/428 (45%), Gaps = 14/428 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 G L L TP Y + + F AF G+ V YA KA Sbjct: 12 NGHLEIGGCDTTLLKERFGTPLYIVDEQLVRRRCREFIEAFRETGLKFQVAYASKAFCVM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ A G LD+VS GEL AL A PAERI F G KT +EI++AL + I CF V+ Sbjct: 72 AMCALAAEEGMSLDVVSSGELFTALQAGFPAERIHFHGNNKTPEEIEMALDAQIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYA 183 SE EL L A ++ I RV P + A+TH+ ++TG+++ KFG I Sbjct: 132 SEMELHLLQALASEKEQQVNILLRVTPGVEAHTHEYMATGQEDSKFGFDIGNGTARQAVE 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A L + + GV HIGSQI ++ F A + + +++++ + + I++GGG GI Sbjct: 192 QAIELDHLNLLGVHSHIGSQIFEVNGFQMAAERVAAFSREIKEQLQFSFKVINLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKK 295 Y + P S Y I + +I +EPGR +V D G + V SIK Sbjct: 252 RYTEEDTPLKVSTYVQAIGEAVKTYFSGLYDELPEIWIEPGRSIVGDSGTTLYTVGSIKD 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D RP LY A +E + N A D I G CE+GD + + Sbjct: 312 IPQVRKYVSVDGGMTDNPRPALYQAKYE-AMLANRAQDTNEETVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ GDLL + TGAY + YN + VN + ++ R T+++++ D Sbjct: 371 VELPRINSGDLLAVASTGAYNYSMASNYNRIRRPAVVFVNNGEAELVVRRETYEDIVRND 430 Query: 415 SIPAWLQK 422 +P L + Sbjct: 431 VVPQRLIR 438 >gi|83721058|ref|YP_443535.1| diaminopimelate decarboxylase [Burkholderia thailandensis E264] gi|167620699|ref|ZP_02389330.1| diaminopimelate decarboxylase [Burkholderia thailandensis Bt4] gi|257137679|ref|ZP_05585941.1| diaminopimelate decarboxylase [Burkholderia thailandensis E264] gi|83654883|gb|ABC38946.1| diaminopimelate decarboxylase [Burkholderia thailandensis E264] Length = 423 Score = 284 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 178/419 (42%), Positives = 246/419 (58%), Gaps = 5/419 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G+LHAE V LA TP + YS A+ Y ++ A G + A+KAN Sbjct: 5 AFDYVDGTLHAERVCTADLAERFGTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN V+ A LG+G DIVS GEL R LAA A+ +VFSGVGK+ DE+ +AL++G+ CF Sbjct: 65 SNLGVLNVFARLGAGFDIVSGGELARVLAAGGRAQNVVFSGVGKSADEMRIALEAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A SLGK+AP++ RVNPD++ TH ISTG K +KFGI + Y Sbjct: 125 NVESIPELDRLNAVAASLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LP +++ G+D HIGSQI ++ + A L DL +Q+ ++G I H+DVGGGLGI Sbjct: 185 RAAAALPNLEVVGIDCHIGSQITELSPYLDAIDKLLDLVEQIEADGVKIHHVDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G+ +I EPGR L + GIL+T+V +K+ +K Sbjct: 245 TYDDETPPDIGAYVRAVLERIDARGHGHREIWFEPGRSLTGNAGILLTRVEFLKQGEEKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y V P D D+VGP+CE+GD++ +R +A Sbjct: 305 FAIVDAAMNDLARPAMYQ-AFHAIEPVTPRTDVAAAVYDVVGPVCESGDWLGRDRSLA-I 362 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 PGDLL I GAYG S YN+R E++V+G+ +++RPR T + L E + +P Sbjct: 363 APGDLLAIRSAGAYGFTMSSNYNARPRAAEVIVDGASAYLVRPRETVESLFEREAVLPD 421 >gi|121635635|ref|YP_975880.1| diaminopimelate decarboxylase [Neisseria meningitidis FAM18] gi|120867341|emb|CAM11112.1| diaminopimelate decarboxylase [Neisseria meningitidis FAM18] gi|325131386|gb|EGC54095.1| diaminopimelate decarboxylase [Neisseria meningitidis M6190] gi|325137467|gb|EGC60053.1| diaminopimelate decarboxylase [Neisseria meningitidis ES14902] gi|325204928|gb|ADZ00382.1| diaminopimelate decarboxylase [Neisseria meningitidis M01-240355] Length = 414 Score = 284 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 177/404 (43%), Positives = 245/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAARLGKTAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDE-DV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++VNG + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVNGGGYKLIRRRETLEQQMANE 402 >gi|225871912|ref|YP_002753366.1| diaminopimelate decarboxylase [Acidobacterium capsulatum ATCC 51196] gi|225794282|gb|ACO34372.1| diaminopimelate decarboxylase [Acidobacterium capsulatum ATCC 51196] Length = 436 Score = 284 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 190/423 (44%), Positives = 255/423 (60%), Gaps = 11/423 (2%) Query: 4 FKYFEGS--LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 F Y + LH E VSLE LA TP Y YS I + + F+ AF + ++C+A+KA Sbjct: 15 FSYPDRRAALHVEGVSLEALARRHGTPLYVYSADHIAQRFDLFARAFAPVSHLICFAVKA 74 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA-ERIVFSGVGKTIDEIDLALQSGIY 120 NS A+++ L G+G DIVS GEL R LA A ER+VFSGVGKT E+DLAL+SGI Sbjct: 75 NSALAILQLLEKRGAGFDIVSGGELERVLAVNKKAAERVVFSGVGKTAPEMDLALRSGIL 134 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F+VESE EL+ L +RA L K+A ++ RVNPD+ A TH ISTG +E KFGI + + Sbjct: 135 LFHVESEGELELLAERASKLRKRAAVSLRVNPDVFAETHPYISTGLREHKFGIEMARARK 194 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y + ++ GV +HIGSQI E F A + + L QLR +GH I+ +D GGGL Sbjct: 195 VYRAVARHKYLEARGVSVHIGSQIRMAEPFGAAAERVAALIGQLRKDGHGIRFLDAGGGL 254 Query: 241 GIAYH-------SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 GI Y D A+L+H + ++LEPGRFLVA G LVT+V+ Sbjct: 255 GIEYQAGLEDASFDPAERVQQYAAALLHAVATVPEITLLLEPGRFLVAQAGALVTRVLYR 314 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K++ K FVI+D AMND +RP LY A+HE+ ++ G R + ADIVGP+CETGDF A Sbjct: 315 KQNGAKHFVIVDAAMNDLIRPALYQAHHEVVPVLPRRGARSMV-ADIVGPVCETGDFFAR 373 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 +R +A R G+LL I GAYG S YNSR+ E++V+G + +IR R T +L+ Sbjct: 374 DRAMAAVREGELLAILDAGAYGMSLSSNYNSRVRPAEVLVSGKRARLIRRRETINDLLAP 433 Query: 414 DSI 416 + Sbjct: 434 EKF 436 >gi|304320595|ref|YP_003854238.1| Orn/DAP/Arg decarboxylase, family 2 [Parvularcula bermudensis HTCC2503] gi|303299497|gb|ADM09096.1| Orn/DAP/Arg decarboxylase, family 2 [Parvularcula bermudensis HTCC2503] Length = 419 Score = 284 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 178/419 (42%), Positives = 258/419 (61%), Gaps = 3/419 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F L+AE+V L ++A V TP Y YS + ++Y ++ F D ++ +A+K Sbjct: 1 MDHFSSRHDGLYAEDVPLRRIADAVGTPLYIYSAATLRRHYDILADEFKNRDALIAFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A SN AV+ L G+G DIVS GEL RAL A +PAER+VFSGV K+ E++ AL +GI Sbjct: 61 ALSNIAVLALLGRRGAGADIVSGGELYRALKAGIPAERVVFSGVAKSRGEMEAALNAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVESE+EL L+ A +LGK AP+A RVNPD++A T +ISTG+K+DKFG+P Sbjct: 121 QFNVESEAELAHLSAVASALGKTAPVALRVNPDVDAGTDTRISTGRKDDKFGVPFADAGR 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY A+ LPG++ G+ +HIGSQI + F +A + L LR+ GH + H+D+GGGL Sbjct: 181 LYRLAAALPGLRPQGLTVHIGSQITSVAPFERAAARVGGLVTSLRAEGHEVTHLDLGGGL 240 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + PP DYA+ +++ +L ++ILEPGR + + G+ VT+++ K Sbjct: 241 GIPYERAAAAPPLPVDYAATLNRATADLNVRLILEPGRLIAGNAGLFVTRIVLTKNQEGT 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + ++D AMND +RP LY A HE+ P G +H H I GP+CE+ D A + + Sbjct: 301 HYALVDGAMNDLIRPALYGARHEVMEDTPPTGVPVHHH--IAGPVCESTDLFAKDVPLHE 358 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 G LL GAYGAVQ+ YN+R L+PE++V+G +F +IR R T++E++ L+ IP Sbjct: 359 VSAGALLAFRTAGAYGAVQASQYNTRPLVPEVLVDGDRFTVIRRRPTYEEMLSLEVIPD 417 >gi|182412489|ref|YP_001817555.1| diaminopimelate decarboxylase [Opitutus terrae PB90-1] gi|177839703|gb|ACB73955.1| diaminopimelate decarboxylase [Opitutus terrae PB90-1] Length = 434 Score = 284 bits (725), Expect = 3e-74, Method: Composition-based stats. Identities = 173/435 (39%), Positives = 254/435 (58%), Gaps = 15/435 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+Y LH E+V L +A + TP Y YS T I +NY + G+D VCYA+K Sbjct: 1 MHHFRYSGHDLHCESVDLAAVARLYGTPTYVYSATTITENYQRLQRSLSGLDLQVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN N A+++ ++LG+G D+VS GE+RR +AA + VF+GVGK+ EI LAL++ ++ Sbjct: 61 ANGNLALLRLFSNLGAGFDLVSGGEIRRVVAAGGNLRKSVFAGVGKSEAEIKLALENQVF 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F+VESE EL +N A +LG KAPIA RVNPD++A TH KI+TGK ++KFGIP+ Q + Sbjct: 121 AFHVESEPELARINHVAGTLGVKAPIAIRVNPDVDAQTHAKITTGKSDNKFGIPLRQAGA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG-- 238 Y A+ L +++ GV +HIGSQ+ + F +A K L L++N GG Sbjct: 181 AYEAAAKLKNIEVKGVQIHIGSQLTSVAPFVEAVKKLVPFVADLKANHGISYFSIGGGMG 240 Query: 239 ------------GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 + + Y + L KI+LE GRF+V + G+L Sbjct: 241 IVYRDALASGEQAWWSNQPAGQGMITPESYGEALTPLLAPLGLKILLEHGRFMVGNAGVL 300 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 +T+V +K+ A K F+I+D AMND +RP +YD+YHEI + + R + ADIVGP+CE Sbjct: 301 LTRVEHLKRGASKNFLIVDAAMNDLVRPAMYDSYHEIVPLHRDSSRRALV-ADIVGPVCE 359 Query: 347 TGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 + D A +R++ G+LL GAYG + YN+RL+ E++V GS F ++ R T Sbjct: 360 STDCFAKDRQLQEVGEGELLAFMSAGAYGYAMANRYNARLMPAEVVVRGSSFELVNARET 419 Query: 407 FQELIELDSIPAWLQ 421 F++ I + IPA+L+ Sbjct: 420 FEQTIANEKIPAFLK 434 >gi|152993635|ref|YP_001359356.1| diaminopimelate decarboxylase [Sulfurovum sp. NBC37-1] gi|151425496|dbj|BAF72999.1| diaminopimelate decarboxylase [Sulfurovum sp. NBC37-1] Length = 409 Score = 284 bits (725), Expect = 3e-74, Method: Composition-based stats. Identities = 155/407 (38%), Positives = 232/407 (57%), Gaps = 6/407 (1%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 N+ + LA TP Y Y +E+ Y AF G +++ YA+KANSN +VI LA L Sbjct: 2 NIDYKALAQKYGTPLYMYDFDYMERRYNDLKEAFAGKKSLINYAVKANSNLSVIAHLAKL 61 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+G D VS GE+RRAL A V +I+FSGVGK DEI AL+ I N+ESE+E+K + Sbjct: 62 GTGADCVSIGEVRRALDAGVDRYKIIFSGVGKRDDEIREALEKDILMLNLESEAEMKRVE 121 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 A LGK+A I+ RVNP+I+ TH ISTG E+KFG+ I +Y YA+ + Sbjct: 122 MVAKELGKEARISIRVNPNIDPQTHPYISTGLHENKFGVEIDMAKRMYIYANKSEYLNPV 181 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+ HIGSQ+ +++ ++ ++ DL + L+ +I+ DVGGG+G+ Y + P Sbjct: 182 GIHFHIGSQLTKLDPIKESAVIVADLVRSLKVIKIDIKFFDVGGGIGVVYSDETTIPVR- 240 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 DY I + L ++ EPGR++VA+ G T V+ K + K FVI+D MND +RP Sbjct: 241 DYTEAIFEATKGLDVTLLCEPGRYMVANAGAFFTSVLYEKVNDGKRFVIVDGGMNDLIRP 300 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 +LY+AYH I + AD+VGP+CE+GDF N + + DL+ + GAY Sbjct: 301 SLYNAYH---KIDAVMVEGERTFADVVGPVCESGDFFGKNVPLPPLKHNDLIVVHSAGAY 357 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQ 421 G + YN+R E+ + + +IR R ++++ + L+ +L+ Sbjct: 358 GFTMASNYNTRPKPAEVALEAGKDRLIRRRESYEDQVRLEK--EFLR 402 >gi|330827982|ref|YP_004390934.1| diaminopimelate decarboxylase [Aeromonas veronii B565] gi|328803118|gb|AEB48317.1| Diaminopimelate decarboxylase [Aeromonas veronii B565] Length = 416 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 179/417 (42%), Positives = 257/417 (61%), Gaps = 4/417 (0%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L AE SL++LA TP Y YS +E+++ F A + ++CYA+ Sbjct: 1 MDHFNYDADGQLQAEQTSLQQLAEQYGTPLYVYSRATLERHWHAFDKAAGDIPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN A++ LA LGSG DIVS GEL R LAA ++VFSGV K+ E+ LAL+ I Sbjct: 61 KANSNLALLNLLARLGSGFDIVSGGELSRVLAAGGDPAKVVFSGVAKSEAEMRLALEKEI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFN+ESE+EL+ LN+ A ++GKKA ++ RVNPDI+A TH ISTG K++KFGIPI Sbjct: 121 LCFNLESEAELERLNRVAGNMGKKARVSVRVNPDIDAGTHPYISTGLKQNKFGIPIELAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y A+ + ++I GVD HIGSQ+ ++ F +A L L L + G +I H+DVGGG Sbjct: 181 AIYRKAAAMANIEIVGVDCHIGSQLTELNPFMEAADKLLRLIDGLAAEGIHIHHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y +PP ++YA + Q ++ EPGR +VA+ G+L+T+V +K + Sbjct: 241 LGVNY-GSEQPPHPTEYAEALKQKLAGRDLTLLFEPGRAIVANAGVLLTRVEYLKPGETR 299 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F ++D MND +RP+LY A+ I + + AG I D+VGP+CETGDF+ R +A Sbjct: 300 NFALIDAGMNDMLRPSLYGAWMNIIEVDSRAGHAPAI-YDVVGPVCETGDFLGKERTLA- 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 G LL + GAYG S YN+R E++V+G++ H+IR R +L + + Sbjct: 358 IAEGSLLAVRSAGAYGFTMSSNYNTRPRAAEVLVDGAEAHLIREREQLADLWRGEHL 414 >gi|148652160|ref|YP_001279253.1| diaminopimelate decarboxylase [Psychrobacter sp. PRwf-1] gi|148571244|gb|ABQ93303.1| diaminopimelate decarboxylase [Psychrobacter sp. PRwf-1] Length = 445 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 184/412 (44%), Positives = 250/412 (60%), Gaps = 3/412 (0%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 Y +G+L E S+++LA TP Y YS AI Y ++ +F +D VCYA+KANS Sbjct: 32 LSYQQGTLFVEQASVQQLAEQYGTPLYVYSKQAILDAYTAYTTSFAAIDHQVCYAVKANS 91 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N AV+ LA G+G D+VS GEL R LA +IVFSGVGKT+ E+ AL++GI CFN Sbjct: 92 NLAVLSVLAKAGAGFDLVSSGELARVLAVGADPSKIVFSGVGKTVTELTAALKAGIGCFN 151 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 VES SEL TLN A L KAPI+ RVNPD++A TH ISTG K++KFGI + Y Sbjct: 152 VESLSELDTLNAVAAELNVKAPISIRVNPDVDAKTHPYISTGLKDNKFGISHDIAVAAYQ 211 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +A++L ++I G+D HIGSQ+ +I+ F A + +L + L+ G +QHID+GGGLG+ Sbjct: 212 HAASLEHLQIVGIDCHIGSQLTEIDPFVAALDKVCELIEALKQVGIELQHIDLGGGLGVI 271 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 Y + S++A+ + L K+ EPGR +VA+ G+LVTKV +K + + F I Sbjct: 272 YIDEEVA-KVSEFAAALLPKLQELGLKVFFEPGRSIVANAGMLVTKVEVLKPTEHRDFAI 330 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D AMND +RP LY A V A DIVG +CETGDF+A R ++ G Sbjct: 331 VDAAMNDLIRPALYQAEM-AVIPVQTASQASQKSWDIVGAVCETGDFLAKKRLLS-LAVG 388 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 D+L I GAYG V S YNSR E+MV+G + ++R R T +L E +S Sbjct: 389 DILAITGAGAYGFVMSSNYNSRPRPAEVMVSGDKHQVVRARETVAQLFETES 440 >gi|124268300|ref|YP_001022304.1| diaminopimelate decarboxylase [Methylibium petroleiphilum PM1] gi|124261075|gb|ABM96069.1| diaminopimelate decarboxylase [Methylibium petroleiphilum PM1] Length = 424 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 167/413 (40%), Positives = 247/413 (59%), Gaps = 5/413 (1%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 Y L + + +LA TP Y YS A+ + A G + ++CYA+KA+S+ Sbjct: 11 YRGTELFIDGCAASELAARFGTPLYVYSRRAMLAALAPYQRALAGREHLICYAMKASSSL 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 AV++T A G G DIVS GEL R LAA ++VFSG+GKT E+ AL+ G+ CFNVE Sbjct: 71 AVLQTFAQAGCGFDIVSGGELDRVLAAGGDPGKVVFSGLGKTRAEMRRALEIGVRCFNVE 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 SE+EL L++ A+SLG+ AP++ RVNPD++A TH ISTG K +KFGI + + Y A Sbjct: 131 SEAELDVLSEVALSLGRVAPVSLRVNPDVDAKTHPYISTGLKGNKFGIAHDRAVAAYRRA 190 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + LPG+K+ G+D HIGSQI +I + A + DL + + S+G I H+D+GGGLGI Y Sbjct: 191 AQLPGLKVVGIDCHIGSQITEIAPYLDAADRVLDLVEAIESSGLRIHHLDLGGGLGIQYT 250 Query: 246 SDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + P + + +L+ + G+ ++ EPGR LV + G+L+++V+ +K K F + Sbjct: 251 DERPPAADALIGALLARLDARGHGARTLVFEPGRSLVGNAGVLLSEVLYLKPGTHKNFCV 310 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D AMND MRP LY+A I D + + D+VGP+CE+GD++ +R +A +PG Sbjct: 311 VDAAMNDLMRPALYEATMSIVPCR--LRDGVPVVYDVVGPVCESGDWLGRDRALA-LQPG 367 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 D + + GAYG + YNSR E+MV+G +IR R EL + + Sbjct: 368 DAVAVLSAGAYGMSMASNYNSRPRAAEVMVDGDVATLIREREPVAELFRGEHL 420 >gi|313142454|ref|ZP_07804647.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter canadensis MIT 98-5491] gi|313131485|gb|EFR49102.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter canadensis MIT 98-5491] Length = 397 Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats. Identities = 164/396 (41%), Positives = 240/396 (60%), Gaps = 3/396 (0%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 ++A QTP + Y IE+ + F AF G +++CYALKANSN +VIK LA L SG+D Sbjct: 2 QVAKEYQTPLFVYDFDKIEEYFNQFKLAFSGRKSLICYALKANSNLSVIKKLASLESGVD 61 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 VS GE++RA+ A +P +I++SGVGK EI A++ GI N+ES+ EL + A + Sbjct: 62 CVSLGEIKRAILAGIPTYKIIYSGVGKQDYEIQEAIKLGILFINIESKEELLKVESIAKT 121 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 L KA I+ RVNPDI+ TH ISTG KE+KFGI + + SLY YA ++ G+ H Sbjct: 122 LNTKARISIRVNPDIDPQTHPYISTGLKENKFGIGVEEAKSLYLYAHKSESLEPIGIHFH 181 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 IGSQI +++ ++ + + L L + +I+ D+GGGLGI Y + + DYA Sbjct: 182 IGSQITKLQPIAESAQKIAQLLHSLLALKIDIKFFDIGGGLGITYKDETTI-NPYDYAQS 240 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 I + L II EPGRF++ + G+ +T+V+ K S +K FVI++ AMND +RP+LY+A Sbjct: 241 ILECLRGLDVTIICEPGRFIMGNSGVFLTQVLYEKISQEKRFVIVNGAMNDLIRPSLYNA 300 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 YH+I + + DIVGPICE+GD++ N + + GD+L I GAYG S Sbjct: 301 YHKITPL--NPREGELAPTDIVGPICESGDYLGKNIALPPLKAGDILAILSAGAYGFSMS 358 Query: 380 GTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 YN+R E+ ++ + +IR R TF++LI L+ Sbjct: 359 SNYNTRPRCAEVAISQGKARLIRKRETFEDLIALEK 394 >gi|256810722|ref|YP_003128091.1| diaminopimelate decarboxylase [Methanocaldococcus fervens AG86] gi|256793922|gb|ACV24591.1| diaminopimelate decarboxylase [Methanocaldococcus fervens AG86] Length = 436 Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats. Identities = 156/429 (36%), Positives = 230/429 (53%), Gaps = 16/429 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYA 58 + +G + +LA TP Y S I+ NY + AF G + +V YA Sbjct: 10 EIKDGRFFIDGYDAIELAEKFGTPLYVMSEEQIKINYNKYIEAFKRWEEETGKEFIVAYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KAN+N A+ K L+ LG G D+VS GEL A + VP+E+IVF+G KT +EI + +++ Sbjct: 70 YKANANLAITKLLSKLGCGADVVSGGELYIAKLSNVPSEKIVFNGNCKTKEEIIMGIEAN 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH-- 176 I FNV+S SEL +N+ A LGK A +AFR+NP+++ TH KISTG K++KFG+ + Sbjct: 130 IRAFNVDSISELILINETAKELGKVANVAFRINPNVDPKTHPKISTGLKKNKFGLDVESG 189 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 A + V + GV HIGSQ+ + F +A + + D +L+ G I+ +++ Sbjct: 190 IALKAIKMALEMDNVNVVGVHCHIGSQLTDVSPFIEATEKVMDFVVKLKEEGIEIRDVNL 249 Query: 237 GGGLGIAYHSDHRPPSSSDYAS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 GGGLGI Y D + P+ D A ++ +ILEPGR LVA G L+ +V Sbjct: 250 GGGLGIPYEKDKKVPTQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGRVH 309 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK++ +V++D MND MRP +YDAYH I N I G +CE+ D Sbjct: 310 HIKETPITKWVMVDAGMNDMMRPAMYDAYHHII---NCKVKDEKEVVSIAGGLCESSDVF 366 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 +R+I P GD+L I GAYG + YN+R ++ + +IR R ++ +LI Sbjct: 367 GRDREIDKPEVGDVLAIFDVGAYGISMANNYNARGRPRMVLTSKKGVFLIRERESYADLI 426 Query: 412 ELDSIPAWL 420 D +P L Sbjct: 427 AKDIVPPHL 435 >gi|294012853|ref|YP_003546313.1| diaminopimelate decarboxylase [Sphingobium japonicum UT26S] gi|292676183|dbj|BAI97701.1| diaminopimelate decarboxylase [Sphingobium japonicum UT26S] Length = 426 Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 280/428 (65%), Gaps = 5/428 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYAL 59 M F Y +G++ AE V + +A V TP Y YST + ++ F D ++ +A+ Sbjct: 1 MDHFTYVDGAMLAEQVPMADIAAQVGTPVYIYSTATLTRHVAVFREGLSQIHDPLIAFAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN N AV+ TLA LG G D+VS GEL RA+AA +PAERIVFSGVGKT DE+ +AL+ GI Sbjct: 61 KANPNAAVLATLAKLGLGADVVSAGELLRAIAAGIPAERIVFSGVGKTADEMRIALEQGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 Y FN+ESE E + L++ A+S+G+KAP+A+R+NPD++A TH KISTGK E+KFGIP + Sbjct: 121 YQFNLESEPEAEMLSEVALSMGRKAPVAYRINPDVDAGTHAKISTGKSENKFGIPYDRAL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + YA A LPG+ + GV +HIGSQ+ + AF + L ++LR+ GH+I+ D+GGG Sbjct: 181 ASYAAARDLPGLDVQGVAVHIGSQLTDLTPLEAAFIKVGALIERLRAEGHDIRTADLGGG 240 Query: 240 LGIAYHSDHR-PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 LG+ Y PPS +DY +++ + +++ EPGR +V + G+L+++V+ +K+ A Sbjct: 241 LGVPYDPSQPLPPSPADYGAMVTRITQGWNVRLMFEPGRLIVGNAGVLLSQVVRVKQGAQ 300 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 FVI+D AMND +RP+LYDA+H+I A++VGP+CETGD A++R + Sbjct: 301 APFVIVDAAMNDLLRPSLYDAWHDIR---AVHPKGERAAANVVGPVCETGDTFAMHRDMD 357 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 + GDL+ GAYGA + TYNSR L PE++V+G ++ ++R R + LIE DSIPA Sbjct: 358 VVGAGDLVAFMTAGAYGATMASTYNSRALTPEVLVSGDKWAVVRARPPIEALIEGDSIPA 417 Query: 419 WLQKTPKQ 426 W+ Q Sbjct: 418 WIASEGVQ 425 >gi|147677570|ref|YP_001211785.1| diaminopimelate decarboxylase [Pelotomaculum thermopropionicum SI] gi|146273667|dbj|BAF59416.1| diaminopimelate decarboxylase [Pelotomaculum thermopropionicum SI] Length = 440 Score = 283 bits (723), Expect = 5e-74, Method: Composition-based stats. Identities = 135/426 (31%), Positives = 207/426 (48%), Gaps = 13/426 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD-GMDTMVCYALKANSNQ 65 +G L +LA TP Y +N + F YA KA N Sbjct: 11 EKGHLEIGGCDTVELARTFGTPLYVLDEALFRQNCRDYYTHFTVRYGAEAVYAGKALLNL 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 AV + + G GLD+VS GEL AL A PAE+I F G K+ E+ +AL++G+ V+ Sbjct: 71 AVCRIVEEEGLGLDVVSGGELYTALKANFPAEKIFFHGNNKSSAELAMALETGVGRIVVD 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YA 183 + EL+ LN+ A +GKKA + R+ P I A+TH+ I TG+ + KFG+ I ++ Sbjct: 131 NMFELELLNRMAGEVGKKAAVILRLTPGIEAHTHEYIKTGQIDSKFGLVIENGQAMAGVR 190 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-DLTQQLRSNGHNIQHIDVGGGLGI 242 A + G+++ GV HIGSQI +++S+ +A K++ + R G + +D+GGGLG+ Sbjct: 191 RALEMDGIELKGVHCHIGSQIFELDSYSQAAKIMMSFVYLVYRETGCLLGELDMGGGLGV 250 Query: 243 AYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y +P +YA +G K+I+EPGR + G + V +IK Sbjct: 251 YYAEGDKPRPIQEYADVLMKAVMEKASEYGIPVPKVIVEPGRSICGPAGTTLYTVGAIKN 310 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M D RP LY A +E + N AG + + G CE+GD + + Sbjct: 311 IPGIRKYVAVDGGMGDNPRPALYQARYE-ACLANKAGRQPEEVVSVAGKCCESGDMLIWD 369 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + PGD+L + TGAY S YN ++V + +I R T+++LI D Sbjct: 370 ISLPAAEPGDILAVSCTGAYNYTMSMNYNRLPRPAMVLVGNGRAELINRRETYEDLIRTD 429 Query: 415 SIPAWL 420 +P L Sbjct: 430 LLPERL 435 >gi|261403462|ref|YP_003247686.1| diaminopimelate decarboxylase [Methanocaldococcus vulcanius M7] gi|261370455|gb|ACX73204.1| diaminopimelate decarboxylase [Methanocaldococcus vulcanius M7] Length = 438 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 156/429 (36%), Positives = 228/429 (53%), Gaps = 16/429 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYA 58 + +G + +LA TP Y S I+ NY + AF G + +V YA Sbjct: 12 EIKDGRFFIDGYDAVELAEKFGTPLYVMSEEQIKINYNKYIEAFKRWEEETGKEFVVAYA 71 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KAN+N A+ + L+ LG G D+VS GEL A + VP+ +IVF+G KT +EI + +++ Sbjct: 72 YKANANLAITRLLSKLGCGADVVSGGELYIAKLSNVPSRKIVFNGNCKTKEEIIMGIETK 131 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH-- 176 I FNV+S SEL +N+ A LG+ A IAFR+NP++N TH KISTG K++KFG+ + Sbjct: 132 IRSFNVDSISELILINETAKELGETANIAFRINPNVNPKTHPKISTGLKKNKFGLDVESG 191 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 A+ + V + GV HIGSQ+ I F + + + D +L+ G I+ +++ Sbjct: 192 VALKAIKMATEMEHVNVVGVHCHIGSQLTDISPFIEEARKVMDFVVELKKEGIEIEDVNL 251 Query: 237 GGGLGIAYHSDHRPPSSSDYASLI-----HQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 GGGLGI Y D + P+ D A I +ILEPGR LVA G L+ +V Sbjct: 252 GGGLGIPYEKDKQIPTQKDLADAIINTLLEYKDKVEMPNLILEPGRSLVATAGYLLGRVH 311 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK++ +V++D MND MRP +Y+AYH I N I G +CE+ D Sbjct: 312 HIKETPITKWVMIDAGMNDMMRPAMYEAYHHII---NCKVKDEKEKVSIAGGLCESSDVF 368 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 +R++ P GD+L I GAYG + YN+R I+ + +IR R T+ +LI Sbjct: 369 GRDRELDKPEVGDILAIFDVGAYGISMANNYNARGRPRMILTSKKGVFLIRERETYADLI 428 Query: 412 ELDSIPAWL 420 D +P L Sbjct: 429 AKDIVPPHL 437 >gi|323705134|ref|ZP_08116710.1| diaminopimelate decarboxylase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535560|gb|EGB25335.1| diaminopimelate decarboxylase [Thermoanaerobacterium xylanolyticum LX-11] Length = 445 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 117/431 (27%), Positives = 185/431 (42%), Gaps = 12/431 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQ 65 +G L K+A TP Y + +N +F N F V YA KA Sbjct: 11 KGHLEIAGCDTVKIAKQYGTPLYVIDEELLRENCRSFYNGFKKNYPGNEVIYASKAFMTT 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ K + GLD+VS GEL AL A P + I F G K+IDE+ +AL+ I C V+ Sbjct: 71 AICKIIEEENLGLDVVSGGELYTALKADFPVQNIYFHGNNKSIDELTMALEYNIGCIIVD 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYA 183 + EL LN+ A+ +GKK I R++P + A+TH+ I TG+ + KFG P+ Sbjct: 131 NWFELNMLNELALKMGKKPNIYLRISPGVEAHTHEYIKTGQIDSKFGFPLFNGDALDAIK 190 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 YA TL V ++G+ HIGSQI +S+ ++ + ++++ GG Sbjct: 191 YALTLDNVNLTGLHCHIGSQIFSYDSYKAEIDIMMNFLKKVKDTTGWEVENLDLGGGFGI 250 Query: 244 YHSDHRPPSSSDYASLIHQYF--------GNLQCKIILEPGRFLVADVGILVTKVISIKK 295 + + P + + + II+EPGR ++ + G + V +IK Sbjct: 251 AYVEEDDPQPIELIASEIMKTVEEFSKELNIKRPNIIVEPGRSIIGNAGTTLYTVGAIKN 310 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + T + N A I G CE+GD + + Sbjct: 311 IPGVRKYVSVDGGMADNIRTALYGAKYNAIVANKARKINLEKVSIAGKCCESGDMLIWDI 370 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GD++ + TGAY + YN +++N + +I R T+ +LI+ D Sbjct: 371 DLPQLESGDIIAVTCTGAYNYSMASNYNRLPRPAAVLLNNGESDLIVARETYDDLIKNDV 430 Query: 416 IPAWLQKTPKQ 426 IP L K+ Sbjct: 431 IPERLLSENKK 441 >gi|157164320|ref|YP_001466459.1| diaminopimelate decarboxylase [Campylobacter concisus 13826] gi|112801631|gb|EAT98975.1| diaminopimelate decarboxylase [Campylobacter concisus 13826] Length = 407 Score = 282 bits (722), Expect = 6e-74, Method: Composition-based stats. Identities = 156/406 (38%), Positives = 234/406 (57%), Gaps = 6/406 (1%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + ++LA +TP Y Y I++ Y NAF ++VCYA+KANSN +V+K LA LG Sbjct: 1 MDFKELASKYKTPLYVYDFNYIKERYEALKNAFYARKSLVCYAVKANSNLSVLKFLADLG 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G D VS GE++RAL A +I+FSGVGK+ +E+ AL++ I NVES +EL L + Sbjct: 61 AGFDCVSIGEVKRALLAGAKRYQIIFSGVGKSDEELKEALENEILLINVESFAELLRLEE 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L KA I+ RVNP ++A TH ISTG E+KFG+ +Y +A ++ +G Sbjct: 121 IAKGLNLKARISIRVNPGVDAKTHPYISTGLNENKFGVDAVTAKKMYIHAKASEFLEPTG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIGSQ+ + A K++ +L ++LR+ +I+ DVGGGLGI Y+ + + + D Sbjct: 181 IHFHIGSQLTSLSPIIDAAKIVSELLRELRALEIDIKFFDVGGGLGIIYNDE-KEINLYD 239 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I I+ EPGRF+V + G V V+ K + K FVI D AMND +RP+ Sbjct: 240 YAQGILGALKGQDVTIVCEPGRFIVGNAGYFVASVLYEKFNGKKRFVITDGAMNDLIRPS 299 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY A+H+I D D+VGP+CE+GDF+A + + GD++ ++ GAYG Sbjct: 300 LYGAHHKIFVDGK---DENLGTCDVVGPVCESGDFLAKDINLPECESGDVIVVKGAGAYG 356 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQ 421 S YN+R E+ V + +IR R F++++ + +L+ Sbjct: 357 FSMSSNYNTRNRAAEVCVLDGKDRLIRRRECFEDVVAPEI--EFLE 400 >gi|220931558|ref|YP_002508466.1| diaminopimelate decarboxylase [Halothermothrix orenii H 168] gi|219992868|gb|ACL69471.1| diaminopimelate decarboxylase [Halothermothrix orenii H 168] Length = 448 Score = 282 bits (722), Expect = 6e-74, Method: Composition-based stats. Identities = 133/427 (31%), Positives = 206/427 (48%), Gaps = 14/427 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQA 66 G LH +S L TP + I K + AF+ ++ YA KA NQA Sbjct: 13 GVLHIGGISTVDLVEKYGTPLLVFDEWEIRKKAREYVKAFNKYYPNSRTVYASKAFLNQA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + G GLD+VS GEL AL A P E+I F G K+ EI +A+++GI F +++ Sbjct: 73 LCYIIEEEGLGLDVVSGGELYIALKAGFPPEKIFFHGNNKSNAEIKMAVEAGIGRFMLDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAY 184 E + +N+ A L K RV P I A+TH+ I TG+ + KFG+ +++ Sbjct: 133 LKEARYINKVAGRLEKSIKAILRVTPGIEAHTHEFIQTGQIDSKFGVSVYRDQALKAIEE 192 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 + ++++GV +HIGSQI + SF + ++ + +R + ++ +D+GGGLGI Sbjct: 193 IIRMDNIELTGVHVHIGSQIFNLTSFSRTIDVMFEFMNNVRDKTGYILKELDLGGGLGIP 252 Query: 244 YHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P +YA F II EPGR ++ G + V ++K+ Sbjct: 253 YTEDEPDPGIDEYARLVSEKVREKSHEFDYPLPVIINEPGRSIIGTAGTTLYTVGTVKEI 312 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D +RP LY A ++ N A D I G CE+GD + + Sbjct: 313 PFIRKYLAVDGGMTDNIRPALYGAEYDAIL-ANRADDEREEIVSIAGKCCESGDILIHDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 K+ R GD++ I TGAY S YN ++VN +I R ++++LI+ D Sbjct: 372 KMPEAREGDIIAIPCTGAYTYAMSSNYNGLRRPAVVLVNDGNADLIIKRESYEDLIKNDI 431 Query: 416 IPAWLQK 422 +PA L+K Sbjct: 432 VPARLRK 438 >gi|189347052|ref|YP_001943581.1| diaminopimelate decarboxylase [Chlorobium limicola DSM 245] gi|189341199|gb|ACD90602.1| diaminopimelate decarboxylase [Chlorobium limicola DSM 245] Length = 417 Score = 282 bits (722), Expect = 7e-74, Method: Composition-based stats. Identities = 156/420 (37%), Positives = 242/420 (57%), Gaps = 7/420 (1%) Query: 1 MSA---FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY 57 MS F Y + L E+V L++LA + TP + S ++E + F AF + + CY Sbjct: 1 MSERTVFHYQDNVLCCEDVRLDELAGIYGTPLFVTSKRSLEGSLREFEAAFASLPHITCY 60 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 ++KAN N +VI TLA +G G D+ S GEL RAL A V E+I+F+GVGK +EI AL++ Sbjct: 61 SVKANFNLSVISTLAGMGCGCDVNSGGELFRALKAGVSPEKIIFAGVGKKPEEIAFALEA 120 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G+ VES SEL+ + + A G AP+A R+NP++ A TH I+TG ++KFGI Sbjct: 121 GVLMLKVESLSELEAIERIAAEKGLTAPVALRINPNVTAETHPYITTGDSKEKFGIDEAG 180 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + ++ + V++ +DMHIGSQI E + A +L D+ + RS G +I+++D+G Sbjct: 181 LEEAFSLLRRMKHVRLVCLDMHIGSQIFDPEYYVAATAVLLDIFETARSLGFSIEYLDIG 240 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK-KS 296 GG + Y + + +A + +I EPGRFLVA+ +L+++++ K Sbjct: 241 GGFPVTYDARKPATPITYFAEKLMPLLAAAGVPVIFEPGRFLVANASVLLSRILYKKTNH 300 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 K F I+D M + +RP LY ++HE+ ++ + AD+VGP+CE+ DF A R Sbjct: 301 TGKQFYIVDAGMTELIRPALYQSHHEVLTVIRH---EKTVVADVVGPVCESSDFFARQRT 357 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 I G+LL + +GAY AV S YN RL E+MV+G + +IR R T+++LI + + Sbjct: 358 IDDAAEGELLAVMSSGAYAAVMSSNYNGRLRPAEVMVDGQEVTVIRRRETYEQLIANEVL 417 >gi|225619871|ref|YP_002721128.1| diaminopimelate decarboxylase [Brachyspira hyodysenteriae WA1] gi|225214690|gb|ACN83424.1| diaminopimelate decarboxylase [Brachyspira hyodysenteriae WA1] Length = 412 Score = 282 bits (722), Expect = 7e-74, Method: Composition-based stats. Identities = 154/412 (37%), Positives = 235/412 (57%), Gaps = 4/412 (0%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF-DGMDTMVCYALKANSN 64 Y L ENV + ++A + TPFY YS I F D ++ YA+KA +N Sbjct: 4 YENNILMCENVDIREIAEIYGTPFYIYSKNDILNKIRFLKEVFSPLNDVLIVYAIKAENN 63 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +++K +A G G D+VS GE + + A AE +VFSGV KT +EI +++ I FN+ Sbjct: 64 LSILKMMAEEGIGADVVSIGETLKYIKAGGKAENVVFSGVAKTEEEIRKSIELNIKRFNI 123 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ES E +N A L K + RVNP+++A+TH+KI+TG +KFGI I I Sbjct: 124 ESIPEAIRINNIAKELKNKVKCSIRVNPNVDAHTHEKITTGVNGNKFGISIKTIRENSEL 183 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 +L ++I + MHIGSQ+ E F+KA ++RDL ++ S G NI ID+GGG G+ Y Sbjct: 184 LKSLSNIEIESLSMHIGSQMTDAEPFYKAILVMRDLIGEINSMGFNITDIDIGGGYGVRY 243 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + DH + + + + ++ EPGR+ VA+ G L+ +V IK+ + +VIL Sbjct: 244 NRDHSGFDFNKFKAESINLLKEMNLRVTTEPGRYFVAESGALIMRVEYIKEELGRKYVIL 303 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 + MND++R +YDAY+EI +V + D VGPICE+ DF A +R+ ++ GD Sbjct: 304 NGGMNDYVRVAMYDAYNEIYPLVKKDNVS---NYDFVGPICESSDFFAYDRESSVLEQGD 360 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + + GAYG S YNSRL IP++M++ + +IIR R TF+++I + + Sbjct: 361 YVALLDAGAYGFSMSSNYNSRLFIPQVMIDDKKHYIIRKRQTFEDMIRDEIL 412 >gi|113869390|ref|YP_727879.1| diaminopimelate decarboxylase [Ralstonia eutropha H16] gi|113528166|emb|CAJ94511.1| diaminopimelate decarboxylase [Ralstonia eutropha H16] Length = 419 Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats. Identities = 174/416 (41%), Positives = 254/416 (61%), Gaps = 5/416 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F +G+L E V L ++A TP Y YS A+ Y ++ A G V YA+KAN Sbjct: 4 FFHRQDGALAVEQVPLARIAAEFGTPTYVYSRAALTAAYQAYAAACQGRKAQVQYAMKAN 63 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV++ A LG+G DIVS GEL+R LAA ++VFSGVGK+ E++LAL + CF Sbjct: 64 SNLAVLQVFAKLGAGFDIVSGGELKRVLAAGGDPRKVVFSGVGKSAAEMELALAHDVRCF 123 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN+ A +GK+A ++ R+NPD++A TH ISTG K +KFGI + Y Sbjct: 124 NVESIPELDRLNEVAGRVGKRARVSLRINPDVDAKTHPYISTGLKGNKFGIAFEDVLPTY 183 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LP ++++G+D HIGSQI ++E + +A + D+ + L +G ++HIDVGGGLGI Sbjct: 184 RAAAALPHLEVTGIDCHIGSQITEVEPYLEALDKVLDVVEALERDGIRLEHIDVGGGLGI 243 Query: 243 AYHSDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + +L+ + G+ +++ EPGR LV + G+L+T+V +K A K Sbjct: 244 TYTDETPPDITGFATTLLERVAARGHGHREVLFEPGRSLVGNAGVLLTQVEFLKPGAAKN 303 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y+AYH I +V D DIVGP+CE+GD++ +R +A Sbjct: 304 FCIVDAAMNDLARPAMYEAYHRIEPVV--LRDAQAATYDIVGPVCESGDWLGRDRALA-V 360 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +PGDLL + GAYG S YN+R E+MV+G+ H++R R ++L + + Sbjct: 361 QPGDLLAVMSAGAYGFTMSSNYNTRPRAAEVMVDGASVHLVRERELVEDLFRDERL 416 >gi|254804203|ref|YP_003082424.1| Diaminopimelate decarboxylase [Neisseria meningitidis alpha14] gi|254667745|emb|CBA03656.1| Diaminopimelate decarboxylase [Neisseria meningitidis alpha14] Length = 406 Score = 282 bits (721), Expect = 8e-74, Method: Composition-based stats. Identities = 175/404 (43%), Positives = 248/404 (61%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK A ++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQ-NEKV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGALLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G+++ +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVDGNEYRLIRLRETLEQQMANE 402 >gi|288559410|ref|YP_003422896.1| diaminopimelate decarboxylase LysA [Methanobrevibacter ruminantium M1] gi|288542120|gb|ADC46004.1| diaminopimelate decarboxylase LysA [Methanobrevibacter ruminantium M1] Length = 427 Score = 282 bits (721), Expect = 8e-74, Method: Composition-based stats. Identities = 128/424 (30%), Positives = 190/424 (44%), Gaps = 16/424 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQ 65 +G L +L TP Y + NY F NAF V YA KAN+N Sbjct: 10 KGHLDIGGADACELVEEYGTPIYVIDEERVRDNYNRFYNAFTKFYPKFKVFYACKANTNI 69 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 AV+K L G +D VS GE+ +RI+F+G DE+D + Sbjct: 70 AVLKILEEEGCCIDAVSPGEVYICKKMGFSGDRILFTGNNIRNDEMDYVNSEDVILNIDS 129 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + + + I+FRVNP + A H TG + KFGI + +Y A Sbjct: 130 VSALKRLAE---SIDPQGKKISFRVNPMVGAGHHGHCITGGEMSKFGIMETEAVEIYKLA 186 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFK-LLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 L + G+ HIGS I E F A + + + + G + + ID GGG+GI Y Sbjct: 187 KELGF-EPVGMHSHIGSGILDPEPFKLAIESTMNIAGKVHQEAGIDFEFIDFGGGVGIPY 245 Query: 245 HSDHRPPSSSDYASLIHQYF-------GNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + +A + F + + LEPGR++V D +++ +V S+K+S Sbjct: 246 TPEEELLDLEHFAEENIKLFKEKLEEFDMGEPILYLEPGRYIVGDASVILVEVNSVKES- 304 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + F+ +D N +RP +YD+YH I N + D+ G +CE+GD A +R + Sbjct: 305 YRKFIGVDAGFNTLLRPAMYDSYHHIVV-ANKMNEEPTQTVDVAGNVCESGDLFARDRPL 363 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 GD+L I GAYG + YNSR L EI+V + +IR TF ++ E SIP Sbjct: 364 PDIEEGDILGILNAGAYGYTMASNYNSRPLPAEILVKNGESFVIREAQTFDDIFEKQSIP 423 Query: 418 AWLQ 421 L+ Sbjct: 424 EHLK 427 >gi|302381729|ref|YP_003817552.1| diaminopimelate decarboxylase [Brevundimonas subvibrioides ATCC 15264] gi|302192357|gb|ADK99928.1| diaminopimelate decarboxylase [Brevundimonas subvibrioides ATCC 15264] Length = 424 Score = 282 bits (721), Expect = 8e-74, Method: Composition-based stats. Identities = 188/426 (44%), Positives = 259/426 (60%), Gaps = 8/426 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-----DTMV 55 M F+ G+LHAE+V L+ LA V TP Y YST + ++Y A D D ++ Sbjct: 1 MDHFQLRAGTLHAEDVPLDTLAAEVGTPAYVYSTATLSRHYGVLREAVDAHPAAFGDALI 60 Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 +A+KANSN +V+ TLA LGSG D VSEGE+RRAL A +PA RI+FSGVGKT E+ AL Sbjct: 61 AFAVKANSNLSVLATLARLGSGADTVSEGEIRRALKAGIPAARIIFSGVGKTDAELAYAL 120 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 G+ NVES +EL L A G IA RVNP I A H KI+TG + DKFGIP Sbjct: 121 DVGVRQINVESPAELDRLIAVAAEKGACPDIAIRVNPKIGAGGHAKITTGGEGDKFGIPA 180 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 + +LYA A+ P V G+ HIGSQI + AF+LLR++T LR G ++ +D Sbjct: 181 DEALALYARAAASPHVTPVGLACHIGSQIIDLTPLEAAFRLLREMTLTLRGQGLSVTRLD 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 +GGGLG+ Y S +DYA++ L+ + EPGR L A+ G+L+ +VI I + Sbjct: 241 LGGGLGVPYSGGAETASVADYAAMAAGVLEGLEVEAAFEPGRLLAANAGVLLARVIQITE 300 Query: 296 S-ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + F++LD AMND +RP +YDA+HE+ + GD I DIVGP+CETGD A Sbjct: 301 RADGRRFLVLDAAMNDLVRPAMYDAFHEVKPVTPRDGD--LIAYDIVGPVCETGDTFARG 358 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R + + GDL+ GAYGAV S YNSR L+PE++V+ +++ ++R R T+ E++ + Sbjct: 359 RDLPPLQAGDLVVFTGAGAYGAVMSSEYNSRPLVPEVLVDEARWAVVRGRPTYDEMLTRE 418 Query: 415 SIPAWL 420 ++ WL Sbjct: 419 TVAGWL 424 >gi|157692836|ref|YP_001487298.1| diaminopimelate decarboxylase [Bacillus pumilus SAFR-032] gi|157681594|gb|ABV62738.1| diaminopimelate decarboxylase [Bacillus pumilus SAFR-032] Length = 443 Score = 282 bits (721), Expect = 8e-74, Method: Composition-based stats. Identities = 125/422 (29%), Positives = 194/422 (45%), Gaps = 15/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V LA TP Y Y I + +F AF + + V YA KA S+ A Sbjct: 15 GHLEIGGVDAVSLAETYGTPLYVYDVALIRERAKSFQKAFIEEELTAQVAYASKAFSSIA 74 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + G LD+VS GEL A+ A P E+I F G K+ DE+ +AL++ I C V++ Sbjct: 75 MFQLAKEEGLSLDVVSGGELHTAICAGFPVEKIHFHGNNKSRDELKMALENEIGCIVVDN 134 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AY 184 E+K L + L K+ + R+ P + A+TH I+TG+++ KFG +H + Sbjct: 135 FYEMKLLEELGQELSKQVKVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQADEAVKR 194 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 +++ GV HIGSQI F A + + R + +++GGG GI Sbjct: 195 VLESEVIELLGVHCHIGSQIFDTAGFVLAADKIFLKLNEWRESFGFISTVLNLGGGFGIR 254 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P +++Y I Q + +I +EPGR LV D G + + S K Sbjct: 255 YTEEDEPLPATEYVEKIIQAVKENVARYEFDMPEIWIEPGRSLVGDAGTTLYTIGSSKHV 314 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D M+D +RP LY A +E N I G CE+GD + + Sbjct: 315 PGIRDYVAVDGGMSDNIRPALYQAKYEAAS-ANKMSQSHDQTVSIAGKCCESGDMLIWDI 373 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GDLL + TGAYG S YN + V + ++ R ++ ++++LD Sbjct: 374 DLPELSQGDLLAVFCTGAYGYSMSNNYNRIPRPAVVFVEDGEAQLVVERESYADMVKLD- 432 Query: 416 IP 417 +P Sbjct: 433 LP 434 >gi|310823824|ref|YP_003956182.1| diaminopimelate decarboxylase [Stigmatella aurantiaca DW4/3-1] gi|309396896|gb|ADO74355.1| Diaminopimelate decarboxylase [Stigmatella aurantiaca DW4/3-1] Length = 413 Score = 282 bits (721), Expect = 9e-74, Method: Composition-based stats. Identities = 171/415 (41%), Positives = 252/415 (60%), Gaps = 3/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M++F+Y +G+LHAE+V L +A V TP Y YS A+ ++ AF ++CY++K Sbjct: 1 MTSFQYKKGALHAESVPLGAIAEAVGTPTYVYSQAALTGHFQVLDKAFGESPHLICYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANS AV+ A +GSG DIVS GEL R A + VF+GVGKT +E+ AL +GI Sbjct: 61 ANSTLAVLGLFAGMGSGFDIVSGGELARVRQARGDMGKTVFAGVGKTQEEMARALAAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ L+ G++AP RVNPD++A TH+ ISTG K KFG+P + + Sbjct: 121 LFNVESAEELEALDAVGRQAGRRAPFGLRVNPDVDARTHRYISTGLKTSKFGVPFEEAVA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA A + GV+ GVD HIGSQ+ + A + L +L++ GH ++++D+GGGL Sbjct: 181 LYARARKMKGVRALGVDCHIGSQLTRTAPVKAALSKVAGLYAELKAQGHPLEYLDIGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PPS +YA + + ++ILEPGR LV + G+L+T+V+ K++ KT Sbjct: 241 GITYADE-TPPSPQEYARTVLEVVKGTGARLILEPGRSLVGNAGVLLTRVLYRKQAPAKT 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV++D MND +RP LY+A+H + +V G + D+VGP+CE+ D +A R + LP Sbjct: 300 FVVVDAGMNDLIRPALYEAHHALLPVVKQRGKA--VEVDVVGPVCESTDVLARARPLVLP 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 R G L + GAYG + TYNSR E++V G+ + ++R R ++L + Sbjct: 358 RQGALFAVMSAGAYGMSMASTYNSRPRPAEVLVEGTAWRVVRERERDEDLWRRER 412 >gi|115372602|ref|ZP_01459909.1| diaminopimelate decarboxylase [Stigmatella aurantiaca DW4/3-1] gi|115370323|gb|EAU69251.1| diaminopimelate decarboxylase [Stigmatella aurantiaca DW4/3-1] Length = 457 Score = 282 bits (721), Expect = 9e-74, Method: Composition-based stats. Identities = 171/415 (41%), Positives = 252/415 (60%), Gaps = 3/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M++F+Y +G+LHAE+V L +A V TP Y YS A+ ++ AF ++CY++K Sbjct: 45 MTSFQYKKGALHAESVPLGAIAEAVGTPTYVYSQAALTGHFQVLDKAFGESPHLICYSVK 104 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANS AV+ A +GSG DIVS GEL R A + VF+GVGKT +E+ AL +GI Sbjct: 105 ANSTLAVLGLFAGMGSGFDIVSGGELARVRQARGDMGKTVFAGVGKTQEEMARALAAGIL 164 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ L+ G++AP RVNPD++A TH+ ISTG K KFG+P + + Sbjct: 165 LFNVESAEELEALDAVGRQAGRRAPFGLRVNPDVDARTHRYISTGLKTSKFGVPFEEAVA 224 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA A + GV+ GVD HIGSQ+ + A + L +L++ GH ++++D+GGGL Sbjct: 225 LYARARKMKGVRALGVDCHIGSQLTRTAPVKAALSKVAGLYAELKAQGHPLEYLDIGGGL 284 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PPS +YA + + ++ILEPGR LV + G+L+T+V+ K++ KT Sbjct: 285 GITYADE-TPPSPQEYARTVLEVVKGTGARLILEPGRSLVGNAGVLLTRVLYRKQAPAKT 343 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV++D MND +RP LY+A+H + +V G + D+VGP+CE+ D +A R + LP Sbjct: 344 FVVVDAGMNDLIRPALYEAHHALLPVVKQRGKA--VEVDVVGPVCESTDVLARARPLVLP 401 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 R G L + GAYG + TYNSR E++V G+ + ++R R ++L + Sbjct: 402 RQGALFAVMSAGAYGMSMASTYNSRPRPAEVLVEGTAWRVVRERERDEDLWRRER 456 >gi|241759521|ref|ZP_04757624.1| diaminopimelate decarboxylase [Neisseria flavescens SK114] gi|241320078|gb|EER56439.1| diaminopimelate decarboxylase [Neisseria flavescens SK114] Length = 406 Score = 282 bits (720), Expect = 9e-74, Method: Composition-based stats. Identities = 175/404 (43%), Positives = 246/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E + LA TP Y YS +A+ + + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQLPYTHLAEEFGTPLYVYSKSALTEAFENYQTAFAALNPLVCYAVKANGNLSIIKY 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ RVNPD++A TH ISTG K +KFGI Y +AS Sbjct: 123 DRIRKVAARLGKVAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHASRQSH 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L QL + G ++H+D+GGG+GI Y + Sbjct: 183 LKIVGIDCHIGSQLTDLSPLVEACERILALVDQLVAEGIVLEHLDLGGGVGIVYQDE-NV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K++LEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAKEVQKLIGTRRLKLVLEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYG+ + YN+R E++V+GS+ +IR R T ++ + + Sbjct: 359 AGAYGSSMASNYNTRNRAAEVLVDGSECKLIRQRETIEQQMANE 402 >gi|161869233|ref|YP_001598399.1| diaminopimelate decarboxylase [Neisseria meningitidis 053442] gi|161594786|gb|ABX72446.1| diaminopimelate decarboxylase [Neisseria meningitidis 053442] gi|325127395|gb|EGC50328.1| diaminopimelate decarboxylase [Neisseria meningitidis N1568] gi|325143686|gb|EGC66005.1| diaminopimelate decarboxylase [Neisseria meningitidis M01-240013] Length = 414 Score = 282 bits (720), Expect = 1e-73, Method: Composition-based stats. Identities = 176/404 (43%), Positives = 246/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF + +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKVAARLGKTAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQ-NEKV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGALLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + + + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--PKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++VNG + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNARNRAAEVLVNGGGYKLIRRRETLEQQMANE 402 >gi|319639010|ref|ZP_07993768.1| diaminopimelate decarboxylase [Neisseria mucosa C102] gi|317399914|gb|EFV80577.1| diaminopimelate decarboxylase [Neisseria mucosa C102] Length = 406 Score = 282 bits (720), Expect = 1e-73, Method: Composition-based stats. Identities = 176/404 (43%), Positives = 247/404 (61%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E++ LA TP Y YS +A+ + + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LSCEHIPYSHLAEEFGTPLYVYSKSALTEAFDNYQTAFAALNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ RVNPD++A TH ISTG K +KFGI Y +AS+ Sbjct: 123 DRIQKVAARLGKVAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHASSQSH 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L QL G ++H+D+GGG+GI Y + Sbjct: 183 LKIVGIDCHIGSQLTDLSPLIEACERILALVDQLVEEGIVLEHLDLGGGVGIVYQDE-NV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGSYAQAVQKLIGTRRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYG+ + YN+R E++V+GS + +IR R T ++ + + Sbjct: 359 AGAYGSSMASNYNTRNRAAEVLVDGSGYKLIRQRETVEQQMANE 402 >gi|94497890|ref|ZP_01304455.1| diaminopimelate decarboxylase [Sphingomonas sp. SKA58] gi|94422618|gb|EAT07654.1| diaminopimelate decarboxylase [Sphingomonas sp. SKA58] Length = 421 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 194/422 (45%), Positives = 278/422 (65%), Gaps = 5/422 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYAL 59 M F Y +G++ E V +E +A V TP Y YST A+E++ F D ++ +A+ Sbjct: 1 MDHFSYVDGAMQVEQVPMEAIAQAVGTPVYVYSTAALERHVGVFREGLAQLSDPLIAFAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN N AV+ TLA LG G D+VS GEL RA+AA +PA RIVFSGVGKT +E+ +AL GI Sbjct: 61 KANPNAAVLATLARLGLGADVVSAGELLRAVAAGIPASRIVFSGVGKTAEEMRIALDHGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 Y FN+ESE E + L+Q A ++GK+AP+AFR+NPD++A TH KISTGK E+KFGIP + Sbjct: 121 YQFNLESEPEAEMLSQVAAAMGKRAPVAFRINPDVDAGTHAKISTGKSENKFGIPYDRAL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 YA A LPG+ + GV +HIGSQ+ + AF + L + LR+ GH+I+ D+GGG Sbjct: 181 DSYAAARDLPGLDVQGVAVHIGSQLTDLAPLEAAFVKVGALIEVLRAAGHDIRTADLGGG 240 Query: 240 LGIAYHSDHR-PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 LG+ Y PPS +DY +++ + + +++ EPGR +V + G+L+++VI +K+ A Sbjct: 241 LGVPYDPAQPLPPSPADYGAMVCRVTQSWPVRLMFEPGRVIVGNAGVLLSRVIRVKQGAQ 300 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 FVI+D AMND MRP+LYDA+H+I + A++VGP+CETGD A++R + Sbjct: 301 APFVIVDAAMNDLMRPSLYDAWHDIRTV---KPSGDRATANVVGPVCETGDTFAMHRDMD 357 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 + R G+L+ GAYGA +GTYNSR L PE++V+G ++ ++R R + LI+ D IP Sbjct: 358 VVRAGELVAFMTAGAYGATMAGTYNSRPLTPEVLVSGDKWAVVRERPPLRALIDGDIIPD 417 Query: 419 WL 420 WL Sbjct: 418 WL 419 >gi|332982022|ref|YP_004463463.1| diaminopimelate decarboxylase [Mahella australiensis 50-1 BON] gi|332699700|gb|AEE96641.1| diaminopimelate decarboxylase [Mahella australiensis 50-1 BON] Length = 429 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 124/429 (28%), Positives = 189/429 (44%), Gaps = 12/429 (2%) Query: 4 FKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKA 61 K + G L LA TP Y T I + +A + MV YA KA Sbjct: 1 MKINDKGHLEIGGCDTISLAQRFGTPLYVMDDTQIRDACRRYVSAIRQYGNGMVLYAGKA 60 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 +N A+ K + G GLD+VS GEL A+ A P ERI G K+ +E+ +A++ GI Sbjct: 61 FTNIAMCKLIQQEGLGLDVVSGGELYTAMKAEFPPERIYMHGNNKSYEELRMAVEYGIER 120 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 ++S E++ L Q A + K ++ RV P I+A+TH I TG+++ KFG I Sbjct: 121 VVIDSFHEVELLEQLARNYDKNIGVSVRVKPGIDAHTHHYIKTGQQDSKFGFGIEDGQIY 180 Query: 182 Y--AYASTLPGVKISGVDMHIGSQIDQIESF-HKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 Y T P +++ G+ HIGSQI + + + A +L + ++G N+ ID GG Sbjct: 181 RIIEYILTQPHLELKGLHCHIGSQIFETDPYIETAQIMLELMWDINDTHGLNMDEIDFGG 240 Query: 239 GLGIAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 G GI Y + P + DY +I++EPGR + GI + V Sbjct: 241 GFGIRYVEEDNPLAPEDYIDALTDGIKAYCDNNARQYPRILIEPGRSIAGPAGITLYMVG 300 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 +IK D + I N A I G CE+GD + Sbjct: 301 AIKHIPDVRTYVSVDGGMADNPRPALYQAKYSAMIANKADKPAECTVSIAGKCCESGDML 360 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + GD+L + TGAY + YN + ++V + ++ R ++ +LI Sbjct: 361 IWDIDLPKVEAGDILAVFDTGAYNYSMASNYNRLPIPAVVLVKDGRAELMVSRQSYDDLI 420 Query: 412 ELDSIPAWL 420 D IP+WL Sbjct: 421 SHDCIPSWL 429 >gi|326574794|gb|EGE24728.1| diaminopimelate decarboxylase [Moraxella catarrhalis O35E] Length = 435 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 173/414 (41%), Positives = 251/414 (60%), Gaps = 5/414 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F+Y +G+LH + VS L + TP Y YS A+ +NY ++++AFD +D +CYA+KAN Sbjct: 27 HFEYIDGTLHFDGVSTHALKEIYGTPLYAYSQRALLENYQSYTDAFDTIDHQICYAVKAN 86 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN A++KTLA G+G DIVS+GEL R L A+++V+SGVGKT D+I+ AL++ I+CF Sbjct: 87 SNLAILKTLAKAGAGFDIVSKGELARVLQVA-DAKKVVYSGVGKTADDIEYALKADIHCF 145 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES SEL T+N+ A + A I+ R+NPD++A TH ISTG K++KFGI Q + Y Sbjct: 146 NVESLSELDTINEVAGRQNQIARISLRINPDVDAKTHPYISTGMKDNKFGISHEQAVAAY 205 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 YA LP +KI G+D HIGSQ+ + F A L +L L G +QHID+GGGLG+ Sbjct: 206 VYAHHLPNLKIVGIDCHIGSQLLDTDGFSDALDKLIELIDTLTDKGIKLQHIDLGGGLGV 265 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + P S A+++ L K+ LEPGR LVA+ G+L+T V +K + K F Sbjct: 266 RYIDE-NPVSIDQVATVLLPRLKQLGLKLYLEPGRSLVANAGVLLTTVDVLKPTEFKNFA 324 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D +M++ +RP LY++ I D+VG +CE+ DF+ +R ++ + Sbjct: 325 IVDASMSELIRPALYESQMAIIPAKLSRDTA--KTWDVVGTVCESSDFLGKDRILS-LQV 381 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L + GAYG + YN+R E+MVN +IR R +L + + I Sbjct: 382 GDTLAVTGAGAYGFSMACNYNTRPRPCEVMVNHGTHRLIRKREALDDLWKDELI 435 >gi|118594281|ref|ZP_01551628.1| diaminopimelate decarboxylase [Methylophilales bacterium HTCC2181] gi|118440059|gb|EAV46686.1| diaminopimelate decarboxylase [Methylophilales bacterium HTCC2181] Length = 415 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 168/418 (40%), Positives = 251/418 (60%), Gaps = 6/418 (1%) Query: 1 MSA-FKY-FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA 58 M+ Y G EN++++++ TP Y YS +I +Y +F AF + ++C+A Sbjct: 1 MNNKIIYSNNGKYFIENIAVDEIEKKFDTPAYVYSKKSILDSYRSFEEAFKTSNHLICFA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN N A++ LA+ G+G DIVS GEL+R +AA +++VFSG+GK+ EI+LA+ Sbjct: 61 VKANPNLAILNLLANHGAGFDIVSGGELQRVIAAKGDPKKVVFSGIGKSSKEIELAIHHQ 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I FN+ESE EL + A +GK A I+ RVNP+++A TH ISTG K++KFG+ + Sbjct: 121 ILAFNIESEPELYRIQAIAQKMGKIANISVRVNPNVDAKTHPYISTGLKDNKFGVDEQKA 180 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 LY A+ + + I G+D HIGSQI ++ F + L + +L+ G +I H+D+GG Sbjct: 181 IELYKIANNMDSIAIRGIDCHIGSQITELSPFIDSIAKLVGIIDKLKVLGIHIAHLDIGG 240 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 G+GI Y + +PP+ YA I KII EPGR ++ G+L+TKV +KK + Sbjct: 241 GIGINY-ENEKPPNFKAYAEAILPLLEKQNLKIIFEPGRAILGKAGVLLTKVEYVKKGST 299 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K F I+D AMND MRP+LY+AYH+I + D+VGP+CETGDFI +R ++ Sbjct: 300 KNFAIIDAAMNDLMRPSLYNAYHDIINTSQSSESSAQ--FDVVGPVCETGDFIGKDRMLS 357 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 G++L + GAYG S YNSR+ E++V+ ++ IR R F +LI +SI Sbjct: 358 -LEEGNVLAVVDVGAYGMSMSSNYNSRVRPVELLVDENKIIEIRKRENFNDLIRGESI 414 >gi|219850725|ref|YP_002465157.1| diaminopimelate decarboxylase [Methanosphaerula palustris E1-9c] gi|219544984|gb|ACL15434.1| diaminopimelate decarboxylase [Methanosphaerula palustris E1-9c] Length = 429 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 157/427 (36%), Positives = 226/427 (52%), Gaps = 12/427 (2%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALK 60 F G L E + LA TP Y S I + +A D V YA K Sbjct: 6 HFSIRGGDLFIEGQNCVDLAEQYGTPLYVTSEDRIRTQMQGYRDALSSYYSDISVLYAAK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN N AV + LA G+G D+ S GE+ AL A + +++F+G KT+ ++ LA++ GI Sbjct: 66 ANGNLAVFQILASEGAGADVFSSGEVALALKAGMDPHKLLFNGSSKTLMDLALAVELGIR 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 +V+S EL L+ A GK A IAFRVNP + TH KI+TG KFGIP QI + Sbjct: 126 -VSVDSLDELHQLDAVAAEAGKVAEIAFRVNPALEVPTHPKIATGLASSKFGIPHQQIPA 184 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 YA A +K G+ HIGSQI + F KA +++ + +++ G ++ +D+GGGL Sbjct: 185 AYAEALACSNIKPVGIHCHIGSQILDVTPFAKAAEVMVRIAREITDLGIKLEFLDLGGGL 244 Query: 241 -GIAYHSDHRPPSSSDYASLIHQYF------GNLQCKIILEPGRFLVADVGILVTKVISI 293 H+ PS ++YA+ + F N+ ++ +EPGR LVAD +L+ V S+ Sbjct: 245 GIPYNHTSETAPSPAEYAAAVMPVFLAGIKECNIHPELWVEPGRSLVADSTVLLATVNSV 304 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K A KTFV +D N +RP +YD+YHEI N A + + GPICETGD +A+ Sbjct: 305 K-KAHKTFVNVDAGFNLLIRPVMYDSYHEIVV-ANRADQPIAGTYTVAGPICETGDLLAV 362 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 +R + + GDL+ + TGAYG S YNSR E+++ G ++R T +L+ Sbjct: 363 DRALPGVQEGDLVAVLDTGAYGFSMSSQYNSRPRCAEVLIRGGDAALMRRAETVDDLLAS 422 Query: 414 DSIPAWL 420 P WL Sbjct: 423 MVTPPWL 429 >gi|148826629|ref|YP_001291382.1| diaminopimelate decarboxylase [Haemophilus influenzae PittEE] gi|148716789|gb|ABQ98999.1| diaminopimelate decarboxylase [Haemophilus influenzae PittEE] Length = 450 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 173/392 (44%), Positives = 248/392 (63%), Gaps = 2/392 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKNNKLYAEDIPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ +++ Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I +R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIVEIDRTL-EREKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 GD + GAYGA S YNSR E+ Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRARTAEVF 390 >gi|296271966|ref|YP_003654597.1| diaminopimelate decarboxylase [Arcobacter nitrofigilis DSM 7299] gi|296096141|gb|ADG92091.1| diaminopimelate decarboxylase [Arcobacter nitrofigilis DSM 7299] Length = 402 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 157/400 (39%), Positives = 235/400 (58%), Gaps = 4/400 (1%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 N++ ++LA+ +TP+Y Y I Y +AF ++V YA+KANSN +VIK LA+L Sbjct: 2 NINFKELANKYKTPYYVYDFDHITSQYNELKDAFRARKSLVAYAVKANSNLSVIKHLANL 61 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+G D VS GE+RRAL + +I+FSGVGK EI AL I NVES++EL + Sbjct: 62 GAGADCVSIGEVRRALKVGIAPYKIIFSGVGKIDAEIREALSLDILMINVESDAELNRVE 121 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 A L K A I+ RVNP+I+ TH ISTG E+KFG+ I +Y + Sbjct: 122 MIAKELDKIARISIRVNPNIDPQTHPYISTGLHENKFGVDIDTAKRMYIQCKNSDNLDPV 181 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+ +HIGSQ+ Q++ ++ K++ DL + L++ + +D+GGGLGI Y + + ++ Sbjct: 182 GIHLHIGSQLTQLDPIKESVKIVADLVRNLKAIKIELSFMDIGGGLGIVY-DNEKLIDTN 240 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 +YA + + L ++ EPGRF+V + GI +TKV+ K + +K FVI+D AMND +RP Sbjct: 241 EYAQSVLETMFGLDITVVCEPGRFMVGNAGIFITKVLYEKVNGNKRFVIVDGAMNDLIRP 300 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 LY+A H+I I + ++VGPICE+GDF A N ++ DL+ I GAY Sbjct: 301 ALYNAQHKIEVIDKSSDISD---CNLVGPICESGDFFAKNIELPKTEHNDLVAIYSAGAY 357 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YN+R + EI V + +IR R TF+++I L+ Sbjct: 358 CFTMASNYNTRGRVAEIAVENGKDRLIRKRETFEDIIALE 397 >gi|88604175|ref|YP_504353.1| diaminopimelate decarboxylase [Methanospirillum hungatei JF-1] gi|88189637|gb|ABD42634.1| diaminopimelate decarboxylase [Methanospirillum hungatei JF-1] Length = 430 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 152/433 (35%), Positives = 224/433 (51%), Gaps = 15/433 (3%) Query: 1 MS---AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMV 55 M+ L + +LA TP Y T I NY + +A V Sbjct: 1 MNLPPHLSIKNQHLMIDGCDTVELAFKYGTPLYVTDETRIRDNYRGYVSALSDHYPHIRV 60 Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 YA KAN N +IK LA G+G D+ S GEL AL A + E ++F+G KT + LA+ Sbjct: 61 LYAAKANGNLNIIKILAQEGAGADVFSSGELHMALLAGMKPEHLLFNGSSKTEADHRLAV 120 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 + G+ +++S EL L++ A GK ++FRVNP I+ TH KI+TG KFGIP Sbjct: 121 EKGVR-VSLDSLDELAQLDRIAGEAGKVVEVSFRVNPAIDVPTHPKIATGLATSKFGIPA 179 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 +I YA A V G+ HIGSQI +E F K +++ ++ ++L G + +D Sbjct: 180 AEITDAYAAALACKNVVPVGIHCHIGSQILDVEPFAKEAQVMMEVVEELHRMGVRFKFVD 239 Query: 236 VGGGLGI-AYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVT 288 +GGGLG+ H P+ + YA+ + + +Q +I +EPGR +V D +L+T Sbjct: 240 LGGGLGVAYDHFGPDAPTFASYANAVMPVCTSVLRRLGIQPEIWIEPGRSMVCDSTVLLT 299 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 KV S+K A KTFV +D N +RP +YD+YHE + N A + + GPICETG Sbjct: 300 KVNSVK-KAHKTFVNVDAGFNLLIRPAMYDSYHE-VLVANRADEEPAGTYTVTGPICETG 357 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D +A +RK+ GDL+ + GAYG + YN R E++V Q ++R T Sbjct: 358 DILAHDRKLPGVVAGDLIAVLDAGAYGYSMASQYNGRGRCAEVLVRKGQAELMRRAETID 417 Query: 409 ELIELDSIPAWLQ 421 +L+ P+WL+ Sbjct: 418 DLMANLETPSWLR 430 >gi|268678856|ref|YP_003303287.1| diaminopimelate decarboxylase [Sulfurospirillum deleyianum DSM 6946] gi|268616887|gb|ACZ11252.1| diaminopimelate decarboxylase [Sulfurospirillum deleyianum DSM 6946] Length = 401 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 159/397 (40%), Positives = 235/397 (59%), Gaps = 3/397 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 LAH TP Y Y +I + + F +++C+A+K+NSN +V+K +AHLG+G Sbjct: 5 SALAHTYGTPLYLYDFDSITHKFSALKDVFKARKSLICFAVKSNSNLSVLKHMAHLGAGC 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE++RAL A +P +I+FSGVGK DEI+ AL++ I N+ESE E+K + A Sbjct: 65 DCVSIGEVKRALLAGIPKYKIIFSGVGKRDDEIEEALRNDILMLNLESEEEMKRVEIIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 LG A I+ RVNP+I+ TH ISTG E+KFG+ I +Y +A + G+ Sbjct: 125 KLGVVARISIRVNPNIDPKTHPYISTGLHENKFGVDIESAKRMYIHAKNSASLDPVGIHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQI + F +A +L +L + L++ +I+ DVGGG+GI Y + + DYA Sbjct: 185 HIGSQITDVNPFKEAADVLANLVRNLKALKIDIKFFDVGGGIGIQYKEEETI-ALYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I G L ++ EPGR+LV D G +TKV+ K + K FVI+D AMND +RP+LY Sbjct: 244 SIFAALGGLDVTLVCEPGRYLVGDCGYFLTKVLYEKYNGFKRFVIVDGAMNDLIRPSLYQ 303 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH I ++ D+VGP+CE+GDF+A N ++ D+L ++ GAYG Sbjct: 304 AYHAIEVEGKEGTEKSL--CDVVGPVCESGDFLAKNIELPALEHDDILVVKSAGAYGFTM 361 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 S YN+R+ + E+ + + +IR R TF+++I L+ Sbjct: 362 SSNYNTRMRVAEVALENGEDRLIRRRETFEDVIALEK 398 >gi|296113696|ref|YP_003627634.1| diaminopimelate decarboxylase [Moraxella catarrhalis RH4] gi|295921390|gb|ADG61741.1| diaminopimelate decarboxylase [Moraxella catarrhalis RH4] gi|326562436|gb|EGE12755.1| diaminopimelate decarboxylase [Moraxella catarrhalis 7169] gi|326562805|gb|EGE13100.1| diaminopimelate decarboxylase [Moraxella catarrhalis 46P47B1] gi|326563210|gb|EGE13478.1| diaminopimelate decarboxylase [Moraxella catarrhalis 12P80B1] gi|326563474|gb|EGE13737.1| diaminopimelate decarboxylase [Moraxella catarrhalis 103P14B1] gi|326569144|gb|EGE19206.1| diaminopimelate decarboxylase [Moraxella catarrhalis BC1] gi|326570630|gb|EGE20666.1| diaminopimelate decarboxylase [Moraxella catarrhalis BC7] gi|326571337|gb|EGE21354.1| diaminopimelate decarboxylase [Moraxella catarrhalis BC8] gi|326573784|gb|EGE23741.1| diaminopimelate decarboxylase [Moraxella catarrhalis 101P30B1] Length = 435 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 170/414 (41%), Positives = 250/414 (60%), Gaps = 5/414 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F+Y +G+LH + ++ L + TP Y YS + +NY ++++AFD +D +CYA+KAN Sbjct: 27 HFEYIDGTLHFDGINTHTLKEIYGTPLYAYSQRTLLENYQSYTDAFDAIDHQICYAVKAN 86 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN A++KTLA G+G DIVS+GEL R L A+++V+SGVGKT D+I+ AL++ I+CF Sbjct: 87 SNLAILKTLAKAGAGFDIVSKGELARVLQVA-DAKKVVYSGVGKTADDIEYALKADIHCF 145 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES SEL T+N+ A + A I+ R+NPD++A TH ISTG K++KFGI Q + Y Sbjct: 146 NVESLSELDTINEVAGRQNQIARISLRINPDVDAKTHPYISTGMKDNKFGISHEQAVAAY 205 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 YA LP +KI G+D HIGSQ+ + F A L +L L G +QHID+GGGLG+ Sbjct: 206 VYAHHLPNLKIVGIDCHIGSQLLDTDGFSDALDKLIELIDTLTDKGIKLQHIDLGGGLGV 265 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + P S A+++ L K+ LEPGR LVA+ G+L+T V +K + K F Sbjct: 266 RYIDE-NPVSIDQVATVLLPRLKQLGLKLYLEPGRSLVANAGVLLTTVDVLKPTEFKNFA 324 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D +M++ +RP LY++ I D+VG +CE+ DF+ +R ++ + Sbjct: 325 IVDASMSELIRPALYESQMAIIPAKLSRDTA--KTWDVVGTVCESSDFLGKDRILS-LQV 381 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L + GAYG + YN+R E+MVN +IR R +L + + I Sbjct: 382 GDTLAVTGAGAYGFSMACNYNTRPRPCEVMVNHGTHRLIRKREALDDLWKDELI 435 >gi|212638853|ref|YP_002315373.1| diaminopimelate decarboxylase [Anoxybacillus flavithermus WK1] gi|212560333|gb|ACJ33388.1| Diaminopimelate decarboxylase [Anoxybacillus flavithermus WK1] Length = 460 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 137/422 (32%), Positives = 199/422 (47%), Gaps = 15/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQA 66 G L V LAH+ TP Y Y I + F FD V YA KA S A Sbjct: 34 GHLEIGGVDTIDLAHLYGTPLYIYDVALIRERARAFKRMFDKHRVRAQVAYASKAFSTIA 93 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ + G LD+VS GEL ALAA P ERI F G K+ +E+ +A+++ I C V++ Sbjct: 94 IVQLMEQEGLSLDVVSGGELYTALAAGFPVERIHFHGNNKSKEELQMAIEAKIGCVVVDN 153 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--Y 184 EL+ L Q + PI RV P I A+TH I TG+++ KFG +H + A Sbjct: 154 FYELELLQQLCLMHEYTMPILLRVTPGIEAHTHDYILTGQEDSKFGFDLHNGQADEALQR 213 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGGGLGIA 243 A + + G+ HIGSQI F A K L + R H Q +++GGG GI Sbjct: 214 ALASSHIHVLGIHCHIGSQIFDATGFVLATKKLFEKLAIWRDTHHFTAQVVNLGGGFGIR 273 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P + Y I + F +I +EPGR LV D G + + S K+ Sbjct: 274 YTKEDDPLAPEQYVEQIIEEVKRNVASFHLPFPEIWIEPGRSLVGDAGTTIYTIGSRKEV 333 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + +D M+D +RP LY+A +E + A I G CE+GD + + Sbjct: 334 PNVRQYVAVDGGMSDNIRPALYEAKYEAVLANRMHDHCEEVVA-IAGKCCESGDMLIWDL 392 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + +PGD L + TGAYG + YN + V + ++ R T+++LI LD Sbjct: 393 PLPKAQPGDYLAVFCTGAYGYAMANNYNRIPRPAVVFVEDGEAQLVVKRETYEDLIRLD- 451 Query: 416 IP 417 +P Sbjct: 452 LP 453 >gi|326386636|ref|ZP_08208258.1| diaminopimelate decarboxylase [Novosphingobium nitrogenifigens DSM 19370] gi|326208951|gb|EGD59746.1| diaminopimelate decarboxylase [Novosphingobium nitrogenifigens DSM 19370] Length = 419 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 173/421 (41%), Positives = 256/421 (60%), Gaps = 4/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT-MVCYAL 59 M F+Y G LHAE+V L ++A V TP Y YS + ++ F +A + + +A+ Sbjct: 1 MDHFEYRNGVLHAEDVPLPRIADAVGTPVYVYSRATLTRHARVFRDALSILPATKIAFAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K+N N AV+K LA G G D+VS GE+ RALAA +PAE IVFSGVGKT E+ AL++GI Sbjct: 61 KSNPNLAVLKVLAAEGYGADVVSGGEMERALAAGMPAEGIVFSGVGKTEAEMIRALEAGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 FN+ES E L + A LGK A A RVNPD++A TH KISTGK E+KFG+P + Sbjct: 121 GQFNLESAEEGLELAELAQRLGKTATCALRVNPDVDAGTHGKISTGKAENKFGVPFDRAA 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++A S PG+ + G+ +HIGSQ+ + AF + L +++R+ GH I H+D+GGG Sbjct: 181 DIFARLSAEPGLAMRGLALHIGSQLSSLAPLEAAFTKIGGLMREIRAAGHAITHMDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 +G+ Y + P +YA++I + + ++ EPGR + + G+LVT+V+ +K+ Sbjct: 241 VGVPYKAGDVFPQPEEYAAMIARVTADWGVTLMFEPGRVITGNTGVLVTRVVRVKEGVGH 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 +V++D AMND RP LYDA+H+ + I A+IVGPICE+ D A+ R I Sbjct: 301 PWVVVDAAMNDLARPALYDAWHDF---AAVTPNGQTITANIVGPICESSDTFAMARDIDE 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL GAYGA + TYNSR ++PE+MV+G ++ ++ R+ ++ + +P + Sbjct: 358 VARGDLAVFRTAGAYGATMANTYNSRPMVPEVMVDGERWAVVADRIVPATILSAERVPDF 417 Query: 420 L 420 L Sbjct: 418 L 418 >gi|254458657|ref|ZP_05072081.1| diaminopimelate decarboxylase [Campylobacterales bacterium GD 1] gi|207084423|gb|EDZ61711.1| diaminopimelate decarboxylase [Campylobacterales bacterium GD 1] Length = 402 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 162/404 (40%), Positives = 231/404 (57%), Gaps = 5/404 (1%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++LA +TP Y Y + K Y AF G +++ YA+KANSN +V+K A+LGSG Sbjct: 4 KELASEYKTPLYVYDLDYMSKQYQELKEAFRGRKSILAYAVKANSNLSVVKHFANLGSGA 63 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+RRA A +PA +I+FSGVGK+ DEI A++ I NVESE+EL + A Sbjct: 64 DCVSIGEVRRAFLAGIPAYKIIFSGVGKSDDEIREAIEKDILYINVESEAELFRVAIIAK 123 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 L K + I+ RVNP+I+ TH ISTG ++KFG+ I+ +Y ++ + GV Sbjct: 124 ELNKISRISIRVNPNIDPQTHPYISTGLHDNKFGVDINTAKRMYIFSKNSDSLDPVGVHF 183 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +++ ++ DL + L + ++ D+GGGLGI Y + DYA Sbjct: 184 HIGSQLTNLEPIYESAVIVADLVRSLEAIDIELKFFDIGGGLGITYDDEATI-KPYDYAQ 242 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L +I EPGRFL A+ G +TKV+ K++ K FV++D AMND +RP LY Sbjct: 243 AILGTLKGLDLTVICEPGRFLTANAGYFLTKVLYEKQNGAKKFVVVDGAMNDLLRPALYG 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH I I + A + DIVGP+CE+GDF A + + DLL + GAYG Sbjct: 303 AYHRIEAITDSASEPR--TVDIVGPVCESGDFFAKDYLLPELNHNDLLVVHSAGAYGFGM 360 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQK 422 YN+R E+ V Q +IR R F++LI L+ +L+ Sbjct: 361 GSNYNTRGRSAEVAVEKGQARLIRKRENFEDLIALEK--EFLEN 402 >gi|326572968|gb|EGE22947.1| diaminopimelate decarboxylase [Moraxella catarrhalis CO72] Length = 435 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 171/414 (41%), Positives = 251/414 (60%), Gaps = 5/414 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F+Y +G+LH + ++ L + TP Y YS A+ +NY ++++AFD +D +CYA+KAN Sbjct: 27 HFEYIDGTLHFDGINTHTLKEIYGTPLYAYSQRALLENYQSYTDAFDAIDHQICYAVKAN 86 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN A++KTLA G+G DIVS+GEL R L A+++V+SGVGKT D+I+ AL++ I+CF Sbjct: 87 SNLAILKTLAKAGAGFDIVSKGELARVLQVA-DAKKVVYSGVGKTADDIEYALKADIHCF 145 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES SEL T+N+ A + A I+ R+NPD++A TH ISTG K++KFGI Q + Y Sbjct: 146 NVESLSELDTINEVAGRQNQIARISLRINPDVDAKTHPYISTGMKDNKFGISHEQAVAAY 205 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 YA LP +KI G+D HIGSQ+ + F A L +L L G +QHID+GGGLG+ Sbjct: 206 VYAHHLPNLKIVGIDCHIGSQLLDTDGFSDALDKLIELIDTLTDKGIKLQHIDLGGGLGV 265 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + P S A+++ L K+ LEPGR LVA+ G+L+T V +K + K F Sbjct: 266 RYIDE-NPVSIDQVATVLLPRLKQLGLKLYLEPGRSLVANAGVLLTTVDVLKPTEFKNFA 324 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D +M++ +RP LY++ I D+VG +CE+ DF+ +R ++ + Sbjct: 325 IVDASMSELIRPALYESQMAIIPAKLSRDTA--KTWDVVGTVCESSDFLGKDRILS-LQV 381 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L + GAYG + YN+R E+MVN +IR R +L + + I Sbjct: 382 GDTLAVTGAGAYGFSMACNYNTRPRPCEVMVNHGTHRLIRKREALDDLWKDELI 435 >gi|71064779|ref|YP_263506.1| diaminopimelate decarboxylase [Psychrobacter arcticus 273-4] gi|71037764|gb|AAZ18072.1| diaminopimelate decarboxylase [Psychrobacter arcticus 273-4] Length = 443 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 177/417 (42%), Positives = 240/417 (57%), Gaps = 5/417 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 A Y +LH E VS+ ++ TP Y YS AI Y ++++F ++ +CYA+KAN Sbjct: 26 ALHYQNDALHMEQVSITEVVKHYGTPCYVYSKQAILAVYQAYTDSFASLNHQICYAVKAN 85 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV+ LA G+G DIVS GEL R LAA A R+VFSGVGKT +I+ AL I CF Sbjct: 86 SNLAVLGVLAQAGAGFDIVSRGELMRVLAAGGEASRVVFSGVGKTYSDIEYALNQSIGCF 145 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES SEL +N A +L K API+ RVNPD++A TH ISTG K++KFGI +Y Sbjct: 146 NVESISELTLINDVAKALDKSAPISLRVNPDVDAKTHPYISTGLKDNKFGIAHEDALVVY 205 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ L + I G+D HIGSQ+ ++E F A + +L L G ++HID+GGGLG+ Sbjct: 206 QQAAKLSHINIVGIDCHIGSQLTEVEPFVAALDKVIELVHSLGKVGIELRHIDLGGGLGV 265 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + P S ++A+ + L + EPGR +VA+ GIL+T+V +K + K F Sbjct: 266 RYIDE-TPVSIDEFANALLPKLSKLGLTVFFEPGRSIVANAGILLTQVDVLKPTEHKNFA 324 Query: 303 ILDVAMNDFMRPTLYDAYH---EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 I+D AMND +RP LY A N DIVG ICETGDF+A +R ++ Sbjct: 325 IVDAAMNDLIRPALYQAEMAVIPSALPNNGIDTEGTQPWDIVGAICETGDFLAKDRLLS- 383 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD+L I GAYG S YNSR E+MV + +IR R + + L + + Sbjct: 384 LATGDVLAITGAGAYGFTMSSNYNSRPRASEVMVADDRHQLIRKRESIEALYADEVL 440 >gi|261379373|ref|ZP_05983946.1| diaminopimelate decarboxylase [Neisseria subflava NJ9703] gi|284797820|gb|EFC53167.1| diaminopimelate decarboxylase [Neisseria subflava NJ9703] Length = 406 Score = 280 bits (717), Expect = 3e-73, Method: Composition-based stats. Identities = 174/404 (43%), Positives = 243/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E + LA TP Y YS +A+ + + + AF ++ +VCYA+KAN N +IK Sbjct: 3 LFCEQLPYTHLAEEFGTPLYVYSKSALTEAFENYQTAFSALNPLVCYAVKANGNLNIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ RVNPD++A TH ISTG K +KFGI Y + S Sbjct: 123 DRIQKVAARLGKVAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHVSLQSH 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L QL G ++H+D+GGG+GI Y + Sbjct: 183 LKIVGIDCHIGSQLTDLSPLIEACERILALVDQLADEGIVLEHLDLGGGVGIVYQDE-NV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K++LEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLVLEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + D + A+IVGPICETGDF+ +R IA GDLL I Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYG+ + YN+R E++V+GS + +IR R T ++ + + Sbjct: 359 AGAYGSSMASNYNTRNRAAEVLVDGSGYKLIRQRETVEQQMANE 402 >gi|303244558|ref|ZP_07330892.1| diaminopimelate decarboxylase [Methanothermococcus okinawensis IH1] gi|302485106|gb|EFL48036.1| diaminopimelate decarboxylase [Methanothermococcus okinawensis IH1] Length = 438 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 157/430 (36%), Positives = 237/430 (55%), Gaps = 14/430 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCY 57 +G L + + +LA TP Y S + I KN+ + AF G + +V Y Sbjct: 9 ITVEDGILKIDGYNATELAKEYGTPLYVMSESQIVKNFTRYVEAFKEYTEKTGKEFIVGY 68 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A KANSN A+ + L+ LG G D+VS GEL A + VP+E+IVF+G KT DEI + +++ Sbjct: 69 AYKANSNLAITRLLSKLGCGADVVSGGELYTAKLSNVPSEKIVFNGNCKTKDEIIMGIEA 128 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 I FNV+S SEL +N+ A +GK A +AFR+NP++N TH KISTG K++KFG+ + Sbjct: 129 NIRSFNVDSISELILINETAKEMGKVANVAFRINPNVNPKTHPKISTGLKKNKFGLDVES 188 Query: 178 IHSL--YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 ++ A + V I GV HIGSQ+ I F + + + D +L+ G I+ ++ Sbjct: 189 GIAMKAIKMAKDMENVNIVGVHCHIGSQLTDITPFIEETRKVMDFVVELKKEGIKIKDVN 248 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-----CKIILEPGRFLVADVGILVTKV 290 +GGGLGI Y + P+ D A+ I + +ILEPGR LVA G+L+ KV Sbjct: 249 LGGGLGIPYDKNTEIPTQKDLANAIINTMMEYKDKIELPNLILEPGRSLVATAGVLLGKV 308 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 IK++ ++++D MND MRP +YDAYHEI + + +I G +CE+ D Sbjct: 309 HHIKETPVAKWIMVDAGMNDMMRPAMYDAYHEITPCI-IRNENKKEVVNIAGGLCESSDV 367 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 +R++ D++ I GAYG + YN+R I+ + +IIR R T+ +L Sbjct: 368 FGKDRELPKIEVNDIVAILDVGAYGISMANNYNARGRPRMILTSEKGVYIIRERETYADL 427 Query: 411 IELDSIPAWL 420 + D +P +L Sbjct: 428 LSKDIVPNYL 437 >gi|114566946|ref|YP_754100.1| diaminopimelate decarboxylase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337881|gb|ABI68729.1| diaminopimelate decarboxylase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 441 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 119/427 (27%), Positives = 202/427 (47%), Gaps = 13/427 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD-GMDTMVCYALKANSNQA 66 +G+L + LA TP + +N AF D+ V YA K + A Sbjct: 15 QGNLEIGGMDTVDLARKFGTPLWIIDEEGFRRNCRNIKKAFSLYGDSQVLYASKTLATMA 74 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G GLD+VS GEL AL A P +++ F G K+ +E+ +A+ +G+ V++ Sbjct: 75 IYRIVEQEGLGLDVVSGGELYTALKAGFPMQKVYFHGNNKSREELRMAICAGVARIVVDN 134 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AY 184 EL+ LNQ + I RV P + A+TH+ I TG+ + KFG + ++ Sbjct: 135 FYELELLNQLCTEENCQQEILLRVTPGVEAHTHEYIQTGQIDSKFGFTLSDGQAMEGVKK 194 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A ++PG+K+ G+ HIGSQI ++SF ++ D +++ ++ +++GGGLGI Sbjct: 195 ALSMPGIKLVGLHCHIGSQIFAMQSFQYTSSIMMDFWAEIKRTSGCQLEELNLGGGLGIY 254 Query: 244 Y-------HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y ++ + + G +II+EPGR + G+ + + S K+ Sbjct: 255 YVAGDEPRKAEEWAKAVMPVVQEKARQHGLKVPRIIVEPGRAIAGPAGLTLYTLGSSKEV 314 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D M D RP LY A + + N A ++ I G CE+GD + + Sbjct: 315 KGIRKYVAVDGGMTDNPRPALYAAKY-QALLANKAEEKPVETVSIAGKCCESGDMLIWDL 373 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ GD+L + TGAY S YN ++V Q +I R +++L+ D Sbjct: 374 ELPWVEAGDILAVLATGAYNYSMSSNYNRLPRPAMVLVKQGQADLIIKRENYEDLLRNDL 433 Query: 416 IPAWLQK 422 IP L++ Sbjct: 434 IPERLER 440 >gi|160872806|ref|ZP_02062938.1| diaminopimelate decarboxylase [Rickettsiella grylli] gi|159121605|gb|EDP46943.1| diaminopimelate decarboxylase [Rickettsiella grylli] Length = 417 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 178/420 (42%), Positives = 243/420 (57%), Gaps = 7/420 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS F YF+ L AE + + +L +P Y YS + + + + F + F +CYA+K Sbjct: 1 MS-FIYFDHILQAEAIPITQLITHYGSPCYIYSKSRLYEQWCAFKS-FIQNGHQICYAVK 58 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN A++ LAH G+G DIVS GE R L A AE VFSGVGKT +EI AL + I Sbjct: 59 ANSNLAILALLAHWGAGFDIVSGGEFDRVLRAGGHAENTVFSGVGKTCEEIKSALFAHIG 118 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL + A ++G APIA RVNP+I+ TH I+TG + KFG+ + Sbjct: 119 CFNVESSGELFRIEALAKNIGAVAPIALRVNPNIDPKTHPYITTGLNDTKFGLNEKDALT 178 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY YA+ + I G+ H+GSQI I+ F +A + L LT+ L+ ++ I++GGGL Sbjct: 179 LYRYAAQSNHLTIRGISCHLGSQITTIDPFLQALEHLLKLTEALKKEHILLKTINLGGGL 238 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKI--ILEPGRFLVADVGILVTKVISIKKSAD 298 G+ Y +++ PS +Y+ I + ILEPGR L+A GILVTKV +K + Sbjct: 239 GVTYQTENV-PSVQEYSQKILALLKKRNSTLTLILEPGRALIAQAGILVTKVEYLKSNHR 297 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K F I+D MND +RP LY A H I IV + R DIVGPICE+ DF NR++ Sbjct: 298 KHFAIVDAGMNDLIRPALYQAEHAILPIVQRSLPR-KKKYDIVGPICESSDFFGKNREL- 355 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 + R GD L I +GAYG S YNSR E+MV+ + +IR R T +L+ ++IP Sbjct: 356 VLRAGDYLAIMDSGAYGFSMSSNYNSRPRAAELMVDTDRVFLIRSRETLAQLLANETIPP 415 >gi|194290982|ref|YP_002006889.1| diaminopimelate decarboxylase protein [Cupriavidus taiwanensis LMG 19424] gi|193224817|emb|CAQ70828.1| DIAMINOPIMELATE DECARBOXYLASE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 419 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 173/416 (41%), Positives = 254/416 (61%), Gaps = 5/416 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F +G+L E V L ++A TP Y YS A+ Y ++ A G V YA+KAN Sbjct: 4 FFHRQDGALAVEQVPLARIAAEFGTPTYVYSRAALTAAYQAYAAACAGRKAQVQYAMKAN 63 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN AV++ A LG+G DIVS GEL+R LAA ++VFSGVGK+ E++LAL + CF Sbjct: 64 SNLAVLQVFARLGAGFDIVSGGELKRVLAAGGDPRKVVFSGVGKSAAEMELALAQDVRCF 123 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN+ A +GK+A ++ R+NPD++A TH ISTG K +KFGI + Y Sbjct: 124 NVESIPELDRLNEVAGRVGKRARVSLRINPDVDARTHPYISTGLKGNKFGIAFEDVLPTY 183 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LP + ++G+D HIGSQI ++E + +A + D+ + L G +++HIDVGGGLGI Sbjct: 184 RAAAALPHLAVTGIDCHIGSQITEVEPYLEALDKVLDVVEALEREGISLEHIDVGGGLGI 243 Query: 243 AYHSDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + +L+ + G+ +++ EPGR LV + G+L+T+V +K A K Sbjct: 244 TYTDETPPDITGFATTLLERVAARGHGHREVLFEPGRSLVGNAGVLLTQVEFLKPGAAKN 303 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y+AYH I + D + DIVGP+CE+GD++ +R +A Sbjct: 304 FCIVDAAMNDLARPAMYEAYHRIEPVA--LRDGAAVTYDIVGPVCESGDWLGRDRALA-V 360 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +PGDLL + GAYG S YN+R E+MV+G++ H++R R ++L + + Sbjct: 361 QPGDLLAVMSAGAYGFTMSSNYNTRPRAAEVMVDGARVHLVRERELVEDLFRDERL 416 >gi|258545703|ref|ZP_05705937.1| diaminopimelate decarboxylase [Cardiobacterium hominis ATCC 15826] gi|258519073|gb|EEV87932.1| diaminopimelate decarboxylase [Cardiobacterium hominis ATCC 15826] Length = 425 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 153/405 (37%), Positives = 231/405 (57%), Gaps = 3/405 (0%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 VSL L +P Y Y AI + + + + +A+KANSN A+++ L Sbjct: 24 CVGGVSLVDLVAEFGSPLYVYDGDAIRGQFRAYLAHGLPRELQLHFAMKANSNLAILRLL 83 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 A G+G DIVS GEL R L A A ++VFSGV K+ E+ AL +GI CFNVES +EL+ Sbjct: 84 AAEGAGFDIVSGGELARVLQAGGDAAQVVFSGVAKSDAEMQAALAAGIGCFNVESAAELQ 143 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 L + A ++GK AP+A RVNPD++A TH ISTG +E+KFG+ + +LY +A+ P + Sbjct: 144 CLAEVASAMGKVAPVALRVNPDVDAKTHPYISTGMRENKFGVALEDAPALYRWAAVQPSL 203 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 ++ GV HIGSQI + F +A + L L + G + H+D+GGGLGI D Sbjct: 204 RVVGVGCHIGSQIRSLAPFLQAADSVLTLADALVAEGIALGHVDLGGGLGIETADDFMAL 263 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + +D + + + G ++ L+PGR LV + G+L+++V+ K + + F++LD AMND+ Sbjct: 264 TPADLSRALLERVGERPLRLHLQPGRSLVGNAGLLLSQVVFRKSQSGRDFLMLDAAMNDY 323 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 +RP LY + + P + D+VGP+CE+ D A + I GD++ I T Sbjct: 324 VRPALYQVRPSLVNVSRPYDGVSRM--DVVGPVCESSDTFARDFPICG-ERGDVVVIPGT 380 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GAYG + YNSR E+++ G Q +IR R TF +L + + Sbjct: 381 GAYGFSMASNYNSRPRPAEVLIEGGQARLIRRRETFADLWAQEVL 425 >gi|194100049|ref|YP_002003189.1| LysA [Neisseria gonorrhoeae NCCP11945] gi|193935339|gb|ACF31163.1| LysA [Neisseria gonorrhoeae NCCP11945] Length = 406 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 175/404 (43%), Positives = 246/404 (60%), Gaps = 4/404 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V+ +LA TP Y YS +A+ + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVAYPRLAEEFGTPLYVYSQSALTGAFENYQTAFAALNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ RVNPD++A TH ISTG K +KFGI Y +A+ P Sbjct: 123 DRIQKIAARLGKTAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L L + G ++H+D+GGG+GI Y + Sbjct: 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDE-GV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYARAVQKLMGTRRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LYDAYH I + + L A+IVGPICETGDF+ +R IA GDLL + Sbjct: 302 LMRPALYDAYHHIEAVETKNIEPL--TANIVGPICETGDFLGKDRTIA-CEEGDLLDLRS 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAYGA + YN+R E++V+G + +IR R T ++ + + Sbjct: 359 AGAYGASMASNYNTRNRAAEVLVDGGGYKLIRRRETLEQQMANE 402 >gi|94970467|ref|YP_592515.1| diaminopimelate decarboxylase [Candidatus Koribacter versatilis Ellin345] gi|94552517|gb|ABF42441.1| diaminopimelate decarboxylase [Candidatus Koribacter versatilis Ellin345] Length = 427 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 182/418 (43%), Positives = 250/418 (59%), Gaps = 8/418 (1%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F Y LH E ++ LA TP Y YS T I + + F+ AF + +CY++KANS Sbjct: 12 FVYKSNKLHVEKIAASDLARRFGTPLYTYSATTIRERFDIFNRAFGKVPHTICYSVKANS 71 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAER-IVFSGVGKTIDEIDLALQSGIYCF 122 N ++K L LGSG D+VS GEL R L A + +VFSGVGKT E+DLA++S I F Sbjct: 72 NLTILKMLVKLGSGFDVVSGGELERVLVVDKKAAKKVVFSGVGKTAPEMDLAIKSDILLF 131 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 N+ESESEL+ L RA L KK IAFRVNPD+ A TH ISTG +E KFG+PI LY Sbjct: 132 NIESESELELLASRASKLRKKPRIAFRVNPDVPAETHPYISTGLREHKFGVPITDAALLY 191 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A A++ ++ +GV +HIGSQI + F+ + + DL + LR+ GHNI+ ID GGGLGI Sbjct: 192 AQAASTEWLEPAGVSVHIGSQITDVAPFNATMERVADLVRGLRAQGHNIRLIDGGGGLGI 251 Query: 243 AYHSDHRPPSSS-----DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 AY + +Y++ + +L ++LEPGR ++ G L+T+V+ KK+ Sbjct: 252 AYRDGDTSLKAFEASAKNYSAALLPPLNSLGIHLLLEPGRAIIGPAGALLTRVVYSKKNG 311 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 KTFVI+D MND +RP LY AYHEI D+VGP+CETGDF A +R++ Sbjct: 312 RKTFVIVDAGMNDLIRPALYGAYHEIVAAEPRGTGAE--TVDVVGPVCETGDFFARDREL 369 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GDL+ I GAYG Q+ YN+R E++V GS+ ++R R T ++L+ + Sbjct: 370 THLEEGDLVAILDAGAYGMSQTSNYNTRPRPAEVLVEGSRAKVVRRRETIKDLLGPER 427 >gi|149181673|ref|ZP_01860166.1| diaminopimelate decarboxylase [Bacillus sp. SG-1] gi|148850651|gb|EDL64808.1| diaminopimelate decarboxylase [Bacillus sp. SG-1] Length = 435 Score = 280 bits (715), Expect = 4e-73, Method: Composition-based stats. Identities = 130/419 (31%), Positives = 198/419 (47%), Gaps = 14/419 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 L V +LA TP Y Y I + F N F+ G+ V YA KA S+ A Sbjct: 13 DHLEIGGVDTVELAKEYGTPLYIYDVELIRERARGFKNTFENLGIKAQVAYASKAFSSVA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G LD+VS GEL A+ A PAERI F G K+ +E+ +AL+ I C V++ Sbjct: 73 IFQLMNEEGLSLDVVSGGELFTAVKAGFPAERIHFHGNNKSEEELRMALEHNIGCIVVDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 EL+ L +G+ I RV P I A+TH I TG+++ KFG + + A Sbjct: 133 FYELQLLEDVCKDMGQSMDILIRVTPGIEAHTHDYILTGQEDSKFGFGLENGQTEEALLR 192 Query: 187 --TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 + + G+ HIGSQI + F A + + + + +++GGG GI Sbjct: 193 GVKSAHLNVLGLHCHIGSQIFETTGFVLAASKIIGKLADWKDKHGYVAEVLNLGGGFGIR 252 Query: 244 YHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y ++ P + S Y + F +I +EPGR LV D G + V S K+ Sbjct: 253 YTAEDDPIAPSQYVEEIISEVKKKAEEFNLDMPEIWIEPGRSLVGDAGTTLYSVGSAKEV 312 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D M+D +RP LY+A +E N AG +H I G CE+GD + + Sbjct: 313 PNIRKYLAVDGGMSDNIRPALYEAKYEAIL-ANKAGQPVHETVSIAGKCCESGDMLIWDL 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD+L + TGAYG + YN P + V + ++ R +F++L++LD Sbjct: 372 PLPESSQGDILAVFCTGAYGYSMANNYNRIPRPPVVFVENGKTKLVVRRESFEDLLKLD 430 >gi|78044590|ref|YP_360770.1| diaminopimelate decarboxylase [Carboxydothermus hydrogenoformans Z-2901] gi|77996705|gb|ABB15604.1| diaminopimelate decarboxylase [Carboxydothermus hydrogenoformans Z-2901] Length = 517 Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats. Identities = 136/428 (31%), Positives = 206/428 (48%), Gaps = 14/428 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 +G L V LA TP Y KN + F ++ YA K Sbjct: 83 EKGHLEIGGVDTVDLAREFGTPLYILDEEEFRKNCREYYQNFTQKHPGSLAIYAGKTLLT 142 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + + G GLD+VS GEL A+ A P ++ F G K+ +EI L +++G+ F V Sbjct: 143 TAICRLVEEEGLGLDVVSGGELYTAIKADFPLHKVYFHGNNKSPEEIRLGVEAGVGRFVV 202 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA- 183 ++ EL LN A S + PI RV+P I A+TH+ I TG+ + KFG PI ++ A Sbjct: 203 DNLYELYLLNDIAKSYKVRQPILLRVSPGIEAHTHEYIKTGQIDSKFGFPIETGQAMDAA 262 Query: 184 -YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLG 241 A L G+++ G HIGSQI ++ESF +++ + ++ G + +D+GGGLG Sbjct: 263 QRALELDGIELKGFHCHIGSQIFELESFAHTVEVMTAFMAEVFKATGFMTEELDLGGGLG 322 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIK 294 I Y PP+ + A I + K +I+EPGR + G + + +IK Sbjct: 323 IYYAEGDNPPTVAAMAETIFTTLESQCQKLGLKVPKVIVEPGRSIAGPAGSTLYTIGAIK 382 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + +D M D RP LY A +E N A D+ I G CE+GD + Sbjct: 383 DIPGIRTYVAVDGGMGDNPRPALYQAKYEAIV-ANKANDQPVKLVSIAGKCCESGDMLIW 441 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + ++A +PGDLL + TGAY + YN ++V G + +I R T+ +L+ Sbjct: 442 DIELAEIKPGDLLLVSNTGAYNYSMAMNYNRLPRPAMVLVGGGKAELIVRRETYDDLLSH 501 Query: 414 DSIPAWLQ 421 D IPA L+ Sbjct: 502 DLIPAHLK 509 >gi|51247744|pdb|1TUF|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase From M. Jannaschi gi|51247745|pdb|1TUF|B Chain B, Crystal Structure Of Diaminopimelate Decarboxylase From M. Jannaschi Length = 434 Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats. Identities = 153/429 (35%), Positives = 230/429 (53%), Gaps = 16/429 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYA 58 + +G + +LA TP Y S I+ NY + AF G + +V YA Sbjct: 8 EIKDGRFFIDGYDAIELAEKFGTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYA 67 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 AN+N A+ + LA LG G D+VS GEL A + VP+++IVF+G KT +EI + +++ Sbjct: 68 YXANANLAITRLLAKLGCGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEAN 127 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I FNV+S SEL +N+ A LG+ A +AFR+NP++N TH KISTG K++KFG+ + Sbjct: 128 IRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESG 187 Query: 179 HSL--YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 ++ A + V + GV HIGSQ+ I F + + + D +L+ G I+ +++ Sbjct: 188 IAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNL 247 Query: 237 GGGLGIAYHSDHRPPSSSDYAS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 GGGLGI Y+ D + P+ D A ++ +ILEPGR LVA G L+ KV Sbjct: 248 GGGLGIPYYKDKQIPTQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVH 307 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK++ +V++D MND MRP +Y+AYH I N I G +CE+ D Sbjct: 308 HIKETPVTKWVMIDAGMNDMMRPAMYEAYHHII---NCKVKNEKEVVSIAGGLCESSDVF 364 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 +R++ GD+L I GAYG + YN+R ++ + +IR R T+ +LI Sbjct: 365 GRDRELDKVEVGDVLAIFDVGAYGISMANNYNARGRPRMVLTSKKGVFLIRERETYADLI 424 Query: 412 ELDSIPAWL 420 D +P L Sbjct: 425 AKDIVPPHL 433 >gi|194336708|ref|YP_002018502.1| diaminopimelate decarboxylase [Pelodictyon phaeoclathratiforme BU-1] gi|194309185|gb|ACF43885.1| diaminopimelate decarboxylase [Pelodictyon phaeoclathratiforme BU-1] Length = 417 Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats. Identities = 158/414 (38%), Positives = 243/414 (58%), Gaps = 4/414 (0%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + F+Y +L ++V LE+LA TP + S ++ ++Y F AF+ + CY++KA Sbjct: 5 NFFRYTGTTLCCDDVKLEELAANFGTPLFVTSRRSVIESYKAFECAFEALPHFTCYSVKA 64 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N N +VI+TLA LG G D+ S GEL RAL + V ++I+F+GVGK DEI ALQSG+ Sbjct: 65 NYNLSVIRTLAELGCGCDVNSAGELYRALQSGVSPDKIIFAGVGKREDEIVYALQSGVLM 124 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 ES SEL+ +++ A LG A +A R+NP++ A TH I+TG ++KFGI ++ ++ Sbjct: 125 LKAESLSELRAIDRIAGELGLTASVAIRINPNVTAETHPYITTGDSKEKFGIDEAELSTV 184 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 ++ S LP +K+ G+DMHIGSQI E + A L + + R G I+ +D+GGG Sbjct: 185 FSLLSRLPNIKLVGLDMHIGSQIFDPEYYVAATVKLLAIFKASRELGFAIEFLDIGGGFP 244 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK-KSADKT 300 + Y +A + L K+I EPGR+LVA+ +L+T+++ K K Sbjct: 245 VTYDPLKPATPIEHFAEKLVPMLLPLDVKVIFEPGRYLVANASVLLTRILYKKSNHTGKQ 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F ++D M + +RP LY ++HE+ + + AD+VGPICE+ DF A +R I Sbjct: 305 FFVVDAGMTELIRPALYQSHHEVQSVTFH---EEEVIADVVGPICESSDFFARHRAIGAA 361 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 G+LL + GAY AV S YN RL E++VNGS+ ++R R T ++L++ + Sbjct: 362 EEGELLAVMSAGAYAAVMSSNYNGRLRPAEVLVNGSEVKLVRKRETLEQLVQNE 415 >gi|254300613|ref|ZP_04968058.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 406e] gi|157810592|gb|EDO87762.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 406e] Length = 423 Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats. Identities = 180/419 (42%), Positives = 246/419 (58%), Gaps = 5/419 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AF Y +G+LHAE VS +LA TP + YS A+ Y ++ A G + A+KAN Sbjct: 5 AFDYVDGTLHAERVSTVELAERFGTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKAN 64 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN V+ A LG+G DIVS GEL R LAA A +VFSGVGK+ DE+ +AL++G+ CF Sbjct: 65 SNLGVLNVFARLGAGFDIVSGGELARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCF 124 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL LN A SLGK+AP++ RVNPD++ TH ISTG K +KFGI + Y Sbjct: 125 NVESIPELDRLNAVAASLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATY 184 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ LP +++ G+D HIGSQI ++ + A L DL +++ ++G I H+DVGGGLGI Sbjct: 185 RAAAALPNLEVVGIDCHIGSQITELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGI 244 Query: 243 AYHSDHRPPSSSDY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + P + G+ Q +I EPGR L + GIL+T+V +K+ +K Sbjct: 245 TYDDETPPDIGAYVRAVLARIDARGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKN 304 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D AMND RP +Y V P D DIVGP+CE+GD++ R +A Sbjct: 305 FAIVDAAMNDLARPAMYQ-AFHAIVPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-I 362 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 PG LL I GAYG S YN+R E++V+G+ H++RPR T + L E + +P Sbjct: 363 APGGLLAIRSAGAYGFTMSSNYNTRPRAAEVIVDGANAHLVRPRETVESLFEHEAILPE 421 >gi|119357521|ref|YP_912165.1| diaminopimelate decarboxylase [Chlorobium phaeobacteroides DSM 266] gi|119354870|gb|ABL65741.1| diaminopimelate decarboxylase [Chlorobium phaeobacteroides DSM 266] Length = 435 Score = 279 bits (713), Expect = 7e-73, Method: Composition-based stats. Identities = 151/414 (36%), Positives = 236/414 (57%), Gaps = 4/414 (0%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F Y + +L + L+ LA TP + S + Y F AF G+ CY++KAN Sbjct: 25 FHYSKNTLCCDGQRLDDLADTFGTPLFVTSKKNLITRYNEFEEAFSGLPHFTCYSVKANF 84 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N +VIKT LG G D+ S GEL RAL A V E+I+F+GVGK +EI AL+SG+ Sbjct: 85 NLSVIKTFGELGCGCDVNSGGELYRALQAGVSPEKIIFAGVGKKAEEIAYALRSGVLMLK 144 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 ES SEL +++ A G A +A R+NP++ A TH I+TG ++KFGI ++ ++ Sbjct: 145 AESLSELAVIDRIAAESGNVALVAIRINPNVTAETHPYITTGDSKEKFGIDEGELDAVLM 204 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 S L V+++G+DMHIGSQI E + A L + +++++ G I++ D+GGG + Sbjct: 205 LLSELKHVRLAGLDMHIGSQIFDPEYYVAATIKLLAILERVKAQGFAIEYFDIGGGFPVT 264 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI-KKSADKTFV 302 Y + + +A + K+I EPGRFLVA+ +L+T+++ + K F Sbjct: 265 YDPAKQATPIAQFAEKLIPLLRPAGVKVIFEPGRFLVANASVLLTRILYRKQNHTGKQFF 324 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I+D M + +RP LY ++HE+ + + + AD+VGP+CE+ DF A +R I Sbjct: 325 IVDAGMTELIRPALYQSHHEVLAVTRH---KESVEADVVGPVCESSDFFARHRTIDDAAE 381 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 G+LL + +GAY AV S YN RL E++V+G ++R R T+++LI+ + + Sbjct: 382 GELLAVMSSGAYAAVMSSNYNGRLRPAEVLVDGQDVRLVRTRETYEQLIQNELL 435 >gi|313683044|ref|YP_004060782.1| diaminopimelate decarboxylase [Sulfuricurvum kujiense DSM 16994] gi|313155904|gb|ADR34582.1| diaminopimelate decarboxylase [Sulfuricurvum kujiense DSM 16994] Length = 400 Score = 279 bits (713), Expect = 7e-73, Method: Composition-based stats. Identities = 164/400 (41%), Positives = 228/400 (57%), Gaps = 4/400 (1%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + + LA TP Y Y ++ + + AF G +++ YA+KANSN +V+K A LG Sbjct: 2 IDFKALAQTYGTPLYVYDFDKMKTQFESLKEAFRGRKSILAYAVKANSNLSVVKHFAQLG 61 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE+RRAL A VP RI+FSGVGK DEI A++S I NVESE+EL + Sbjct: 62 SGADCVSIGEVRRALMAGVPKYRIIFSGVGKRDDEIREAIESDILYINVESEAELGRVEM 121 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A LG KA I+ RVNP+I+ TH ISTG ++KFG+ I +Y A + G Sbjct: 122 IARELGAKARISIRVNPNIDPKTHPYISTGLHDNKFGVEIVAAKRMYIQAKNSDHLDPVG 181 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIGSQ+ ++E ++A ++ DL + L++ ++ D+GGGLG+ Y + D Sbjct: 182 IHFHIGSQLTELEPIYEAAVIVADLLRSLQAIDIELKFFDIGGGLGVRY-DNETTIEPYD 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I + II EPGRFL A+ G +TKV+ K + K FV++D AMND +RP+ Sbjct: 241 YAQAILSALKGIDVTIICEPGRFLTANAGYFLTKVLYEKNNGAKRFVMVDGAMNDLIRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY AYH I + AD+VGP+CE+GDF+A N + DLL I GAYG Sbjct: 301 LYKAYHRIEALDK---SGEESIADVVGPVCESGDFLAKNYPLPPMEHNDLLVIHSAGAYG 357 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 YN+R EI V G+ +IR R F+++I L+ Sbjct: 358 FGMGSNYNTRGRSAEIAVEGANVRLIRRRENFEDVIALER 397 >gi|288555982|ref|YP_003427917.1| diaminopimelate decarboxylase [Bacillus pseudofirmus OF4] gi|288547142|gb|ADC51025.1| diaminopimelate decarboxylase [Bacillus pseudofirmus OF4] Length = 440 Score = 279 bits (712), Expect = 9e-73, Method: Composition-based stats. Identities = 131/429 (30%), Positives = 204/429 (47%), Gaps = 15/429 (3%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYAL 59 S+ +G L V +LA+ TP + Y I++ F AF +G++ V YA Sbjct: 6 SSLINDKGHLEIGGVDTIELANKYGTPLFVYDVALIKERAEQFQEAFREEGVNYQVAYAS 65 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA S A+ + LG LD+VS GEL A+ A VP ERI F G K++ E+++A++SGI Sbjct: 66 KAFSCIAMFQLADELGLSLDVVSGGELYTAIQAGVPMERIHFHGNNKSLAELEMAVESGI 125 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 C V++ ELK L K I R+ P + A+TH ISTG+++ KFG + Sbjct: 126 GCVVVDNFYELKQLGHICARHDVKMDILLRITPGVEAHTHDYISTGQEDSKFGFDLESGQ 185 Query: 180 SLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDV 236 A +L P + + G+ HIGSQI + F A + + + ++ R G +++ Sbjct: 186 VDQAIQLSLLDPHINLLGIHSHIGSQIFETSGFVMAVEKIFEFIEKWREELGFTPSVLNL 245 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGILVTK 289 GGG GI Y P +Y + +I +EPGR LV D G + Sbjct: 246 GGGFGIRYIEGDTPLPVGEYVRKMVHVIKEKAAAHQMEIPEIWIEPGRSLVGDAGTTLYS 305 Query: 290 VISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 + S K+ + +D M+D +RP LY A +E N A + I G CE+G Sbjct: 306 IGSRKEIPNVRHYLSVDGGMSDNLRPALYQAEYEGIL-ANRADEETTETFSIAGKCCESG 364 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + D+L + TGAYG + YN P + V + ++ R +++ Sbjct: 365 DMLIWDLPLPKASHEDVLAVFCTGAYGYSMANNYNRIPRPPVVFVEKGEAQLVIQRESYE 424 Query: 409 ELIELDSIP 417 +L+ LD +P Sbjct: 425 DLVRLD-LP 432 >gi|82523967|emb|CAI78778.1| diaminopimelate decarboxylase [uncultured epsilon proteobacterium] Length = 403 Score = 279 bits (712), Expect = 9e-73, Method: Composition-based stats. Identities = 156/407 (38%), Positives = 234/407 (57%), Gaps = 5/407 (1%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 ++ ++LA +TP Y Y + Y AF G +++ YA+KANSN +V+K A LG Sbjct: 2 INFKELAGEYKTPLYVYDLDYMSAQYNELKAAFKGRKSIMAYAVKANSNLSVVKHFADLG 61 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE+RRA A +P+ +I+FSGVGK+ DEI A++ I NVESE+EL + Sbjct: 62 SGADCVSIGEVRRAFLAGIPSYKIIFSGVGKSDDEIREAIEKDILYINVESEAELGRVEL 121 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L I+ RVNP+I+ TH ISTG ++KFG+ + +Y +A + G Sbjct: 122 IAKELNCTCRISIRVNPNIDPKTHPYISTGLHDNKFGVDLSSAKRMYIFAKNSENLDPVG 181 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIGSQ+ Q++ +++ +++ DL + L++ ++ D+GGGLG+ Y + + D Sbjct: 182 IHFHIGSQLTQLKPIYESAEIVADLVRSLQNIKIELKFFDIGGGLGVKYDDEVTI-NPYD 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L ++ EPGRFL A+ G +TKV+ K++ DK FV++D AMND +RP Sbjct: 241 YAQAILGTLKGLDLTVVCEPGRFLTANAGYFLTKVLYEKQNGDKKFVVVDGAMNDLLRPA 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY AYH+I I + A + DIVGP+CE+GDF A + + DLL I G+YG Sbjct: 301 LYGAYHKIEAITDNASE--MQKVDIVGPVCESGDFFAKDYMLPKLEHNDLLVIHSAGSYG 358 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQK 422 YN+R E+ + +IR R TF +L+ L+ +L+K Sbjct: 359 FGMGSNYNTRGRSAEVALKNGTAKVIRKRETFDDLVALEL--EFLEK 403 >gi|322381769|ref|ZP_08055723.1| diaminopimelate decarboxylase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154157|gb|EFX46479.1| diaminopimelate decarboxylase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 445 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 134/428 (31%), Positives = 202/428 (47%), Gaps = 14/428 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 +G L V +L TP Y T + + F +AF G+ V YA KA Sbjct: 11 NQGHLEIGGVDTTELVERFGTPLYVVDETLVRQRCQEFVSAFRDSGLKFQVAYASKAFCV 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +A+ + G LD+VS+GEL AL + P ERI F G KT EI++AL++GI CF V Sbjct: 71 KAMCRVAVEEGMSLDVVSDGELMTALESGFPPERIHFHGNNKTPQEIEMALRAGIGCFVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA- 183 ++ E++ L+ A G + + R+ P + A+TH+ ISTG+ + KFG + + A Sbjct: 131 DNFVEMQLLHSMAAEQGLRVNVLLRITPGVEAHTHEYISTGQTDSKFGFDLENGSAFQAV 190 Query: 184 -YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLG 241 AS L + G+ HIGSQI ++E F A + + Q+R + Q I++GGG G Sbjct: 191 QEASRLESFHLLGIHSHIGSQIFEVEGFQIAVEKVAAFAVQVRDEMGISFQVINLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y ++ P S Y + +I +EPGR +V D G + V +IK Sbjct: 251 IRYTAEDTPLPVSQYVQAITNSIKTCFASYKYPIPEIWVEPGRSIVGDAGTTLYTVGTIK 310 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 +D M D RP LY + +E N A + + G CE+GD + Sbjct: 311 DIPGVRKYVSVDGGMTDNPRPALYQSVYEAIL-ANRAKEEAAEVISVAGKCCESGDMLIW 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ + GD+L + TGAY + YN + V Q I+ R +F+ L+ Sbjct: 370 DVKLPKVQTGDILAVFCTGAYNYSMASNYNRIRRPAVVFVQNGQADIVVKRESFEYLLGN 429 Query: 414 DSIPAWLQ 421 D IP L+ Sbjct: 430 DVIPKRLR 437 >gi|319651413|ref|ZP_08005542.1| diaminopimelate decarboxylase [Bacillus sp. 2_A_57_CT2] gi|317396944|gb|EFV77653.1| diaminopimelate decarboxylase [Bacillus sp. 2_A_57_CT2] Length = 439 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 132/426 (30%), Positives = 207/426 (48%), Gaps = 19/426 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 +G L + LA TP Y Y I + F FD G+ V YA KA S Sbjct: 11 EKGHLEIGGMDTVDLAGQFGTPLYVYDVALIRERARGFKQTFDKLGIKAQVAYASKAFST 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+++ + G LD+VS GEL ALAA P ERI F G K+ +E+++AL++ + C V Sbjct: 71 VAMVQLVDEEGLSLDVVSGGELYTALAADFPPERIHFHGNNKSREELEMALKNQVGCIVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA- 183 ++ EL+ L + SL + I RV P I A+TH I TG+++ KFG + + A Sbjct: 131 DNFYELELLEEICESLAARTKILLRVTPGIEAHTHDYILTGQEDSKFGFDLQNGQAETAL 190 Query: 184 -YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLG 241 A ++ G+ HIGSQI F A K + + + + + +++GGG G Sbjct: 191 QKALNSSWIETLGLHCHIGSQIFDTTGFILAAKKIFEKMAEWKEKHAYEPIVLNLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y D P +S Y +++ +I +EPGR LV D G + + S K Sbjct: 251 IRYTEDDDPIHASQYVEEIIGEVKKQAEHYSMKMPEIWIEPGRSLVGDAGTTLYQTGSRK 310 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + + ++ +D M+D +RP LY A +E N D+ I G CE+GD + Sbjct: 311 EVPNVRNYLAVDGGMSDNIRPALYQAKYEAVL-ANRVLDKPEETVSIAGKCCESGDMLIW 369 Query: 354 NRKIALPRPGD--LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + LP+ GD LL + TGAYG + YN P + + + ++ R T+++++ Sbjct: 370 D--LPLPKAGDQDLLAVFCTGAYGYSMANNYNRIPRPPVVFIENGEAKLVVKRETYEDIL 427 Query: 412 ELDSIP 417 LD +P Sbjct: 428 RLD-LP 432 >gi|229543952|ref|ZP_04433011.1| diaminopimelate decarboxylase [Bacillus coagulans 36D1] gi|229325091|gb|EEN90767.1| diaminopimelate decarboxylase [Bacillus coagulans 36D1] Length = 438 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 129/420 (30%), Positives = 189/420 (45%), Gaps = 14/420 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQ 65 +G L V LA TP Y Y I + F F + V YA KA S Sbjct: 12 KGHLEIGGVDTVSLAARYGTPLYVYDVALIRQRARAFKETFRKLGVKSQVAYASKAFSAI 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+I+ G LD+VS GEL ALAA P E I F G K+ +E+++AL +GI + Sbjct: 72 AMIQLADEEGLSLDVVSGGELYTALAAGFPVEHIHFHGNNKSREELEMALDAGIGYIVAD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--A 183 + EL L G+K RV P I A+TH I TG+++ KFG + + Sbjct: 132 NFYELDMLENLCAEKGRKVSALLRVTPGIEAHTHDYILTGQEDSKFGFDLQNGQAEAALK 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 + +K+ GV HIGSQI + F A + + D + G+ + +++GGG GI Sbjct: 192 QVLSSGWIKLLGVHCHIGSQIFETAGFVLAVQKIMDKLDEWHARYGYFPEVLNLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKK 295 Y + P + Y I + +I +EPGR LV + G + V S K+ Sbjct: 252 RYTEEDHPLPPAYYVEEIVKEVKKQAGSRRLPVPEIWIEPGRSLVGEAGTTLYSVGSRKE 311 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 I +D M+D +RP LYDA +E N D+ + G CE+GD + + Sbjct: 312 VPHVRKYIAVDGGMSDNIRPALYDAKYEAVL-ANRPLDKCEETVSVAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL + TGAYG + YN P + V + ++ R T+++LI D Sbjct: 371 LPLPKTGSDDLLAVFCTGAYGYSMANNYNRIPRPPVVFVENGKDELVVKRETYEDLIRND 430 >gi|253576361|ref|ZP_04853691.1| diaminopimelate decarboxylase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844254|gb|EES72272.1| diaminopimelate decarboxylase [Paenibacillus sp. oral taxon 786 str. D14] Length = 442 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 131/429 (30%), Positives = 193/429 (44%), Gaps = 13/429 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +L TP Y + + + +AF V YA KA Sbjct: 12 KGHLEIGGCDTVELKQTYGTPLYIVDEALVRQRCREYMDAFRASGLSFQVAYASKAFCVM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + G LD+VSEGEL AL A PA+RI F G KT DE+++A+ +GI CF + Sbjct: 72 AMCRLAEEEGLSLDVVSEGELYTALQAGFPAQRIHFHGNNKTPDELEMAISAGIGCFVAD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYA 183 + +EL L A G + RV P + A+TH+ ISTG+ + KFG I Sbjct: 132 NFTELHMLQALAAEKGVTVNVLLRVTPGVEAHTHEYISTGQTDSKFGFDIGNGSALEAVD 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGI 242 A+ + + GV HIGSQI ++E F A + + Q++ G + +++GGG GI Sbjct: 192 LANRSLNLHLLGVHSHIGSQIFEVEGFQLAVERVAAFAMQVKDQLGVIFKVVNLGGGFGI 251 Query: 243 AYHSDHRPPSSSDY------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y P SDY A +I +EPGR +V D G + V + K Sbjct: 252 RYTEGDTPLKVSDYVGAITDAVKREFADYPQLPEIWVEPGRSIVGDAGTTLYTVGTSKDI 311 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D M D RP LY + +E + N A D I G CE+GD + + Sbjct: 312 PGVRKYVAVDGGMTDNPRPALYGSKYE-AMLANRANDANEETVSIAGKCCESGDMLIWDV 370 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ GDLL + TGAY + YN + V + ++ R + Q+L+ D Sbjct: 371 ELPKVNSGDLLAVSCTGAYNYAMASNYNRIRRPAVVFVQDGRSDLVVKRESLQDLVACDV 430 Query: 416 IPAWLQKTP 424 IP + K P Sbjct: 431 IPERIAKQP 439 >gi|126650126|ref|ZP_01722359.1| diaminopimelate decarboxylase [Bacillus sp. B14905] gi|126593298|gb|EAZ87260.1| diaminopimelate decarboxylase [Bacillus sp. B14905] Length = 449 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 133/429 (31%), Positives = 204/429 (47%), Gaps = 15/429 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L V +LA TP + Y T I K +F + F G+ V YA KA + Sbjct: 21 ENGHLTIGQVDTLELAKEYGTPLFVYDTALIRKRARSFIDTFKKLGVKAEVAYASKAFAC 80 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 AV + A LD+VS GEL A+ A PAERI F G K+I E++LA S I C V Sbjct: 81 VAVYQLAAEENLSLDVVSGGELFTAIKAGFPAERIHFHGNNKSISELELAFDSKIGCIVV 140 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--Y 182 ++ E++ L + + +K I RV P + A+TH I+TG+ + KFG ++ + + Sbjct: 141 DNFYEIQLLKEISERRQQKMRILLRVTPGVEAHTHDFITTGQADSKFGFDLNNGQADEAF 200 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI F A + L D +++G +++GGG G Sbjct: 201 QQTFNHEFLELLGLHCHIGSQIFDTAGFGLAGEKLIDKISDWNKAHGFTCTVLNLGGGFG 260 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIK 294 I Y + P Y + N +I +EPGR LV D GI + + S K Sbjct: 261 IRYTEEDAPLEPQVYVEDMITVVKNKATVLGLKMPEIWIEPGRSLVGDAGISLYTIGSQK 320 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 D I +D M+D +RP LYDA +E A + + + G +CE+GD + + Sbjct: 321 TVPDVRKYIAVDGGMSDNIRPALYDAKYEAIIASK-ANEPKNEIYTVAGKLCESGDKLII 379 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ GD+L I TGAYG + YN + V Q + R +++++++ Sbjct: 380 DAKLQDAASGDILAIFCTGAYGYSMASNYNRVPRPAVVFVENGQHQLAIRRESYEDIVQN 439 Query: 414 DSIPAWLQK 422 D +P L+K Sbjct: 440 D-LPLTLKK 447 >gi|329118402|ref|ZP_08247108.1| diaminopimelate decarboxylase [Neisseria bacilliformis ATCC BAA-1200] gi|327465448|gb|EGF11727.1| diaminopimelate decarboxylase [Neisseria bacilliformis ATCC BAA-1200] Length = 406 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 183/405 (45%), Positives = 262/405 (64%), Gaps = 4/405 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L EN+S +LA TP Y YS +A+++ + + AF ++ ++CYA+KAN N ++I+ Sbjct: 3 LRCENLSYTELAERYGTPLYVYSQSALDEAFAAYQTAFAALNPLICYAVKANGNLSLIRR 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS GEL R LAA A + +FSGVGK+ E++ AL++GI CFNVES EL Sbjct: 63 FAELGSGFDIVSGGELARVLAAGGSAAKTIFSGVGKSAAEMEYALKAGIKCFNVESLPEL 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + LN A L +AP++ R+NPD++A TH ISTG K +KFGI + + YA A+ LP Sbjct: 123 ERLNGIAGRLNTRAPVSLRINPDVDAQTHPYISTGLKANKFGIAMRDAEAAYARAAELPH 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++I G+D HIGSQ+ +++ +A + + L +L + G +QHID+GGG+GI Y + Sbjct: 183 LRIVGIDCHIGSQLIRLDPLIEACERILALADRLAAQGIELQHIDLGGGVGIVYRDE-DT 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P S YA+ + + G+ +ILEPGR LV + G L+T+V +K++ DK FVI+D AMND Sbjct: 242 PDLSAYAAAVQKLIGSRPLGLILEPGRSLVGNAGDLLTRVEYVKRNEDKNFVIVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LY AYH I PA ADIVGP+CETGDF+A +R+IA + GDLL + Sbjct: 302 LMRPALYQAYHRIEPAEPPA--AAPFTADIVGPVCETGDFLAKDRRIA-AQAGDLLVVRG 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY A +G YN+R E++V+GSQ ++R R T +E++ + Sbjct: 359 AGAYAASMAGNYNARRRAAEVLVSGSQARLVRRRETVEEMLANEQ 403 >gi|296133144|ref|YP_003640391.1| diaminopimelate decarboxylase [Thermincola sp. JR] gi|296031722|gb|ADG82490.1| diaminopimelate decarboxylase [Thermincola potens JR] Length = 446 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 135/432 (31%), Positives = 207/432 (47%), Gaps = 14/432 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSN 64 +G L +LA TP Y I +N + +F G ++ V YA KA Sbjct: 11 EKGHLVIGGCDTVELAREFGTPLYVMDEEFIRQNCKAYYESFTGAYPNSEVIYASKAFLA 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + G GLD+VS GEL AL A P RI F G K+ +EI +AL++ I F V Sbjct: 71 IAMCNIIEEEGLGLDVVSGGELYTALKAKFPTGRIYFHGNNKSPEEIRMALEANIGRFVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--Y 182 ++ E+ LN A + KKA I R+ P I A+TH+ I TG+ + KFG+ + ++ Sbjct: 131 DNTYEMDLLNSIAGEMNKKANILIRITPGIEAHTHEYIQTGQIDSKFGLVLSNGQAMEGI 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLG 241 A L + + G+ HIGSQI +++S+ A +++ + Q+ G I +++GGG G Sbjct: 191 KKALGLENLILKGLHCHIGSQIFELQSYQHAAEVMMEYIQKVTAETGVEITELNLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y + RP S YA + F K+I+EPGR +V G + + S+K Sbjct: 251 IYYSAGDRPASIKTYATIVMETVQRKAREFNINVPKVIVEPGRSIVGAAGTTLYTIGSVK 310 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + +D M D RP LY A +E N A + I G CE+GD + Sbjct: 311 DIPGVRKYVAVDGGMADNPRPALYQARYEALV-ANKADQPKNDEVSIAGKCCESGDMLIW 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + PGD+L + TGAY + YN ++VN +I R T+++L++ Sbjct: 370 DLAVPEVEPGDILAVSCTGAYNYSMASNYNRLTKPAVVLVNRGNAELIVRRETYEDLVQN 429 Query: 414 DSIPAWLQKTPK 425 D +P +K K Sbjct: 430 DIVPERFKKNKK 441 >gi|295696434|ref|YP_003589672.1| diaminopimelate decarboxylase [Bacillus tusciae DSM 2912] gi|295412036|gb|ADG06528.1| diaminopimelate decarboxylase [Bacillus tusciae DSM 2912] Length = 444 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 127/428 (29%), Positives = 194/428 (45%), Gaps = 14/428 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQA 66 G L +LA TP Y + + + F AF V YA KA QA Sbjct: 13 GHLEIGGCDTVELAERFGTPLYVFDEVLLRETCREFHAAFRKAGLRYQVAYAGKAFCTQA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G LD+VS GEL AL A P E+I G K+ DE+ L++GI F V++ Sbjct: 73 MCRLVEEEGLHLDVVSAGELHTALTAGFPPEKIHLHGNNKSRDELIYGLRAGIGGFVVDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 EL L + A GK+ I RV P + A+TH+ I TG+++ KFG + + A Sbjct: 133 FYELDLLAELAERQGKRPNILLRVTPGVEAHTHEYIQTGQQDTKFGFDLASGQAEAAVRR 192 Query: 187 TLPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGGGLGIA 243 + G+ HIGSQI + E F A + + + + + + ++VGGG GI Sbjct: 193 AQRARGVNLVGLHCHIGSQIFETEGFVLAVERMMEFYARAVNEWGASLRILNVGGGFGIR 252 Query: 244 YHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + RP Y + I ++ +EPGR + G + V + K+ Sbjct: 253 YVEEDRPLPVEAYIAAIADAVKGEALRRGVAVPEVWVEPGRRIAGPAGTTLYTVGARKEI 312 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + ++ +D M D RP +Y A +E N AG+ + A + G CETGD + + Sbjct: 313 PGVRRYIAVDGGMADNPRPIIYQARYEAVV-ANRAGEPVEELAAVAGKFCETGDMLIWDT 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 +A PGD+L + TGAY + YN + V + ++ R T +LI LD Sbjct: 372 PLARAVPGDILAVFGTGAYTYSMASNYNRAPRPAVVFVRDGRADVVVRRETLDDLIRLDQ 431 Query: 416 IPAWLQKT 423 IP ++K Sbjct: 432 IPERMRKE 439 >gi|218245017|ref|YP_002370388.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 8801] gi|257058041|ref|YP_003135929.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 8802] gi|218165495|gb|ACK64232.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 8801] gi|256588207|gb|ACU99093.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 8802] Length = 474 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 110/433 (25%), Positives = 188/433 (43%), Gaps = 20/433 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANS 63 + L L+ L +P Y + + AF+ + V YA KA S Sbjct: 41 KQDRLEIGGCDLQTLVKQFGSPLYVLDEATLRTACRQYREAFNTYYQGTSQVIYASKAWS 100 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAA--------PVPAERIVFSGVGKTIDEIDLAL 115 A++ +A G G D+VS GEL + A A++I F G K+ E+ A+ Sbjct: 101 CLAIVSIVASEGLGFDVVSGGELHTTIKALEAMGWSTEQIAQQIYFHGNNKSHQELIFAI 160 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 + G + + PI R+ P I +TH+ I TG + KFG Sbjct: 161 EIGCTIIVDNWLELETLVKLGNQTGTLSIPILLRLTPGIECHTHEYIRTGHLDSKFGFDP 220 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 +Q+ +++ Y S P + G+ HIGSQI + + ++ + ++ +++G +Q ++ Sbjct: 221 NQLDAVFTYVSQQPTLDCRGLHAHIGSQIFERQPHQDLGLVMVEWLKKAQNHGLVLQELN 280 Query: 236 VGGGLGIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVT 288 +GGGLGI Y PPS + + K+I EPGR LV + Sbjct: 281 IGGGLGIRYVESDDPPSIEQWVKTVSESVMKACEIHQLPLPKLIAEPGRSLVGPACVTAY 340 Query: 289 KVISIKKSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 + S K+ +T++ +D M+D RP Y + + N + I G CE+ Sbjct: 341 TIGSRKEIPQLRTYIAVDGGMSDNPRPITYQSRYRTVV-ANRMSEPCTETVTIAGKHCES 399 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 GD + + ++ +PGD+L + TGAY + YN ++V + ++I R T+ Sbjct: 400 GDILIKDAQLPQTQPGDILVVMATGAYNHSMASNYNRLPRPAAVLVQEGEANLIVQRETY 459 Query: 408 QELIELDSIPAWL 420 ++L+ D +P L Sbjct: 460 EDLLRQDRLPQRL 472 >gi|261885449|ref|ZP_06009488.1| diaminopimelate decarboxylase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 403 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 154/400 (38%), Positives = 230/400 (57%), Gaps = 10/400 (2%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA TP Y Y I+ Y F+ +++CYALKANSN +++K +A LG+G D Sbjct: 6 LAKKYGTPLYAYDFDYIQNQYNKLKKEFNARKSLICYALKANSNLSLLKHIADLGAGFDC 65 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+++A+ A +I++SGVGK+ +EI+ AL I N+ESE E+K + A L Sbjct: 66 VSIGEVKKAILAGAQNYKIIYSGVGKSDEEIEEALNLDILMLNLESEEEMKRVESIAKKL 125 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 KKA I+ RVNP+++ TH ISTG ++KFG+ I + +Y YA + G+ HI Sbjct: 126 NKKARISVRVNPNVDPKTHPYISTGLSKNKFGVGIEKARKMYLYAHKSEFLDPVGIHFHI 185 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 GSQ+ ++ +A ++ DL ++L++ +I+ DVGGG+GI Y + + P YA I Sbjct: 186 GSQLTDLKPVIEAANIVSDLLRELKALDIDIKFFDVGGGIGIRY-ENEKDPDLYGYAQGI 244 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK-----TFVILDVAMNDFMRPT 315 II EPGRFLV + G+ +TKV+ K + F+I+D AMND +RP+ Sbjct: 245 LVALKGEDITIICEPGRFLVGNAGVFITKVLYEKINDTHSDDKKRFIIVDGAMNDLLRPS 304 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+A+HEI D+VGPICE+GDF+ N + GD+L ++ GAYG Sbjct: 305 LYEAHHEIIA----LNSGEKELCDVVGPICESGDFLGKNVNLPKQSSGDILVVKSAGAYG 360 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 S YNSRL E+ V G + +IR R +F++L++ + Sbjct: 361 FCMSSNYNSRLRTAEVAVCGGKDRLIRQRESFEDLVKNEK 400 >gi|145300547|ref|YP_001143388.1| diaminopimelate decarboxylase [Aeromonas salmonicida subsp. salmonicida A449] gi|142853319|gb|ABO91640.1| diaminopimelate decarboxylase [Aeromonas salmonicida subsp. salmonicida A449] Length = 416 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 178/417 (42%), Positives = 251/417 (60%), Gaps = 4/417 (0%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L AE SL+ LA TP Y YS +E+++ F A + ++CYA+ Sbjct: 1 MDHFNYDADGQLQAEQTSLQHLAEQYGTPLYVYSRATLERHWHAFDQAAGDIPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN A++ LA LGSG DIVS GEL R LAA ++VFSGV K+ E+ LAL I Sbjct: 61 KANSNLALLNLLARLGSGFDIVSGGELSRVLAAGGDPAKVVFSGVAKSEAEMRLALDKEI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFN+ESE+EL+ LN+ A S+GKKA ++ RVNPDI+A TH ISTG K++KFGIPI Q Sbjct: 121 LCFNLESEAELERLNRVAGSMGKKARVSVRVNPDIDAGTHPYISTGLKQNKFGIPIEQAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y A+ + ++I GVD HIGSQ+ ++ F +A L L L + G +I H+DVGGG Sbjct: 181 AIYRKAAAMANIEIKGVDCHIGSQLTELNPFMEAADKLLRLIDTLAAEGIHIHHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y +PP ++YA + Q ++ EPGR +VA+ G+L+T+V +K + Sbjct: 241 LGVNY-GAEQPPHPTEYAEALKQKLAGRDLTLLFEPGRAIVANAGVLLTRVEYLKPGETR 299 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F ++D MND +RP+LY A+ V+ D+VGP+CETGDF+ R +A Sbjct: 300 NFALIDAGMNDLLRPSLYGAWM-NIIEVDSRTAHEKALYDVVGPVCETGDFLGKERTLA- 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 G LL + GAYG S YN+R E++V+G+Q +IR R +L + + Sbjct: 358 IAEGSLLAVRSAGAYGFTMSSNYNTRPRAAEVLVDGTQSFLIREREQLADLWRGEHL 414 >gi|116621306|ref|YP_823462.1| diaminopimelate decarboxylase [Candidatus Solibacter usitatus Ellin6076] gi|116224468|gb|ABJ83177.1| diaminopimelate decarboxylase [Candidatus Solibacter usitatus Ellin6076] Length = 412 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 179/413 (43%), Positives = 247/413 (59%), Gaps = 2/413 (0%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F Y + E V L LAH V TP Y YS+ I NY +++AF G+ +CYA+KANS Sbjct: 2 FAYSHNDYYCEQVPLADLAHRVGTPVYVYSSAVILGNYRAYADAFAGLPNTICYAVKANS 61 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 + A++ LA G+G DIVS GEL R LAA ++VFSGVGKT E++ AL SGI FN Sbjct: 62 SLAILALLAKAGAGFDIVSGGELYRVLAAGGDPSKVVFSGVGKTAGEVEYALSSGIRSFN 121 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 ESESEL ++ A LGK+A + RVNPD++A TH ISTG + KFGI I ++Y Sbjct: 122 CESESELALIDAMAARLGKQASFSIRVNPDVDAVTHPYISTGLSQHKFGIAIADAPAVYE 181 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A + GV HIGSQI + +A + L LR GH I+H+D+GGGLG+ Sbjct: 182 RARQFRHLVAEGVSCHIGSQILDLSPIQEAVDKVLALANALREQGHPIRHLDLGGGLGVP 241 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 Y P+ +D+ + + + +EPGR +V GIL+T+V+ K++ DK F++ Sbjct: 242 YRPTEIAPAIADFVCGLRKRVTASNLAVTIEPGRSIVGAAGILLTRVLYRKRNGDKEFMV 301 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D AMND +RP+LY A+HEI + A + D+VGP+CETGDF+A +R++A PG Sbjct: 302 VDAAMNDLIRPSLYRAHHEILPLRRNAL--PPVTVDVVGPVCETGDFLARDREMANAMPG 359 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 D L I GAYG V S YNSR PE++V G + +IR R + +L+ + I Sbjct: 360 DYLAICTAGAYGFVLSSNYNSRPRAPEVLVTGDTWRVIRERECYADLVRGEEI 412 >gi|169827284|ref|YP_001697442.1| diaminopimelate decarboxylase [Lysinibacillus sphaericus C3-41] gi|168991772|gb|ACA39312.1| Diaminopimelate decarboxylase [Lysinibacillus sphaericus C3-41] Length = 449 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 132/429 (30%), Positives = 203/429 (47%), Gaps = 15/429 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L V +LA TP + Y T I K +F + F G+ V YA KA + Sbjct: 21 ENGHLTIGQVDTLELAKEYGTPLFVYDTALIRKRARSFIDTFKKLGVKAEVAYASKAFAC 80 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 AV + A LD+VS GEL A+ A PAERI F G K+I E++LA S I C V Sbjct: 81 VAVYQLAAEENLSLDVVSGGELFTAIKAGFPAERIHFHGNNKSIAELELAFDSKIGCIVV 140 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--Y 182 ++ E++ L + + +K I RV P + A+TH I+TG+ + KFG ++ + + Sbjct: 141 DNFYEIQLLKEISERRQQKMRILLRVTPGVEAHTHDFITTGQADSKFGFDLNNGQADEAF 200 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI F A + L D +++G +++GGG G Sbjct: 201 QQTFNHEFLELLGLHCHIGSQIFDTAGFGLAGEKLIDKISDWNKAHGFTCTVLNLGGGFG 260 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIK 294 I Y + P Y + N +I +EPGR LV D G + + S K Sbjct: 261 IRYTEEDAPLEPQVYVEDMITVVKNKATVLGLKMPEIWIEPGRSLVGDAGTSLYTIGSQK 320 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 D I +D M+D +RP LYDA +E A + + + G +CE+GD + + Sbjct: 321 TVPDVRKYIAVDGGMSDNIRPALYDAKYEAIIASK-ANEPKNEIYTVAGKLCESGDKLII 379 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ GD+L I TGAYG + YN + V Q + R +++++++ Sbjct: 380 DAKLQDAASGDVLAIFCTGAYGYSMASNYNRVPRPAVVFVENGQHQLAIRRESYEDIVQN 439 Query: 414 DSIPAWLQK 422 D +P L+K Sbjct: 440 D-LPLTLKK 447 >gi|299538364|ref|ZP_07051647.1| diaminopimelate decarboxylase [Lysinibacillus fusiformis ZC1] gi|298725951|gb|EFI66543.1| diaminopimelate decarboxylase [Lysinibacillus fusiformis ZC1] Length = 439 Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats. Identities = 134/429 (31%), Positives = 202/429 (47%), Gaps = 15/429 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 +G L V +LA TP + Y T I K +F + F G+ V YA KA + Sbjct: 11 EDGHLTIGQVDTLELAKEYGTPLFVYDTALIRKRARSFIDTFKKLGVKAEVAYASKAFAC 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 AV + A LD+VS GEL AL A PAERI F G K+I EI+LA S I C V Sbjct: 71 VAVYQLAAEENLSLDVVSGGELFTALKAGFPAERIHFHGNNKSIAEIELAFDSKIGCIVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--Y 182 ++ E++ L + +K I RV P + A+TH I+TG+ + KFG ++ + + Sbjct: 131 DNFYEIQLLKDISERRQQKMRILLRVTPGVEAHTHDFITTGQADSKFGFDLNNGQADEAF 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI F A + L D +++G +++GGG G Sbjct: 191 QQTFNHEFLELLGLHCHIGSQIFDTAGFGLAGEKLIDKISDWNKTHGFTCTVLNLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIK 294 I Y + P Y + N +I +EPGR LV D G + + S K Sbjct: 251 IRYTEEDAPLEPQVYVEDMITVVKNKATVLGLKMPEIWIEPGRSLVGDAGTSLYTIGSQK 310 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 D I +D M+D +RP LYDA +E A + + G +CE+GD + + Sbjct: 311 TVPDVRKYIAVDGGMSDNIRPALYDAKYEAVIASK-ANEPKDELYTVAGKLCESGDKLII 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ GD+L I TGAYG + YN + V Q + R +++++++ Sbjct: 370 DAKLQDAASGDVLAIFCTGAYGYSMASNYNRVPRPAVVFVEDGQHQLAIRRESYEDIVQN 429 Query: 414 DSIPAWLQK 422 D +P L+K Sbjct: 430 D-LPLTLKK 437 >gi|78189076|ref|YP_379414.1| diaminopimelate decarboxylase [Chlorobium chlorochromatii CaD3] gi|78171275|gb|ABB28371.1| diaminopimelate decarboxylase [Chlorobium chlorochromatii CaD3] Length = 418 Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats. Identities = 153/416 (36%), Positives = 232/416 (55%), Gaps = 5/416 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y G+L + V L+ LA TP Y S ++ ++Y F AF + CY++KAN Sbjct: 6 YFSYCNGALLCDGVPLQTLAEQYGTPLYVTSERSLIESYEAFERAFQPLHHFTCYSVKAN 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 N +VIKT A LG G D+ S GEL R+L A V ++I+F+GVGK +EI AL+SG+ Sbjct: 66 YNLSVIKTFAALGCGCDVNSGGELYRSLQAGVAPDQIIFAGVGKKYEEIAYALESGVLML 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ES SEL +N+ A GK A IA R+NP++ A TH I+TG ++KFGI + L+ Sbjct: 126 KAESVSELHVINRIAAEQGKIASIALRINPNVTAETHPYITTGDSKEKFGIDEADLADLF 185 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A LP V++ G+DMHIGSQI E + A L L +S G ++++D+GGG + Sbjct: 186 ALIRQLPHVRLIGLDMHIGSQIFDPEYYVAATTKLLALFNLSKSMGFALEYLDIGGGFPV 245 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA-DKTF 301 Y +A + L +I EPGR+LVA+ +L+T+++ K++ K F Sbjct: 246 TYTDTKHATPIERFAEKLVPLLQPLGVTVIFEPGRYLVANASVLLTRILYRKRNHVGKEF 305 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 ++D + + +RP LY ++HE+ + + AD+VGP+CE+ DF A R++ Sbjct: 306 FVVDAGLTELIRPALYQSHHEVQAVQRQ---EASVIADVVGPVCESSDFFARQRELDAVP 362 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIELDSI 416 G LL + GAY +V YN RL E+MV + + R R +F++LI+ + + Sbjct: 363 EGGLLAVMSCGAYASVMGSNYNGRLRPAEVMVRRNGEVVLTRRRESFEQLIQNEVL 418 >gi|118475343|ref|YP_891475.1| diaminopimelate decarboxylase [Campylobacter fetus subsp. fetus 82-40] gi|118414569|gb|ABK82989.1| diaminopimelate decarboxylase [Campylobacter fetus subsp. fetus 82-40] Length = 403 Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 154/400 (38%), Positives = 230/400 (57%), Gaps = 10/400 (2%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA TP Y Y I+ Y F+ +++CYALKANSN +++K +A LG+G D Sbjct: 6 LAKKYGTPLYAYDFDYIQNQYNKLKKEFNARKSLICYALKANSNLSLLKHIADLGAGFDC 65 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+++A+ A +I++SGVGK+ +EI+ AL I N+ESE E+K + A L Sbjct: 66 VSIGEVKKAILAGAQNYKIIYSGVGKSDEEIEEALNLDILMLNLESEEEMKRVESIAKKL 125 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 KKA I+ RVNP+++ TH ISTG ++KFG+ I + +Y YA + G+ HI Sbjct: 126 NKKARISVRVNPNVDPKTHPYISTGLSKNKFGVGIEKARKMYLYAHKSEFLDPVGIHFHI 185 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 GSQ+ ++ +A ++ DL ++L++ +I+ DVGGG+GI Y + + P YA I Sbjct: 186 GSQLTDLKPVIEAANIVSDLLRELKALDIDIKFFDVGGGIGIRY-ENEKDPDLYGYAQGI 244 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK-----TFVILDVAMNDFMRPT 315 II EPGRFLV + G+ +TKV+ K + F+I+D AMND +RP+ Sbjct: 245 LAALKGEDITIICEPGRFLVGNAGVFITKVLYEKINDTHSDDKKRFIIVDGAMNDLLRPS 304 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+A+HEI D+VGPICE+GDF+ N + GD+L ++ GAYG Sbjct: 305 LYEAHHEIIA----LNSGKKELCDVVGPICESGDFLGKNVNLPKQSSGDILVVKSAGAYG 360 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 S YNSRL E+ V G + +IR R +F++L++ + Sbjct: 361 FCMSSNYNSRLRTAEVAVCGGKDRLIRQRESFEDLVKNEK 400 >gi|307295072|ref|ZP_07574914.1| diaminopimelate decarboxylase [Sphingobium chlorophenolicum L-1] gi|306879546|gb|EFN10764.1| diaminopimelate decarboxylase [Sphingobium chlorophenolicum L-1] Length = 421 Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 186/423 (43%), Positives = 277/423 (65%), Gaps = 5/423 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYAL 59 M F Y +G++ E V + ++A V TP Y YST + ++ F D ++ +A+ Sbjct: 1 MDHFTYVDGAMLVEQVPMAEIAAKVGTPVYIYSTATLTRHVGVFREGLSQLADPLIAFAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN N AV+ TL LG G D+VS GEL RA+AA +PA RIVFSGVGKT DE+ +AL+ GI Sbjct: 61 KANPNAAVLATLGRLGLGADVVSAGELLRAIAAGIPANRIVFSGVGKTADEMRIALEQGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 Y FN+ESE E + L++ A+S+G++AP+A+R+NPD++A TH KISTGK E+KFGIP + Sbjct: 121 YQFNLESEPEAEMLSEVALSMGRRAPVAYRINPDVDAGTHAKISTGKSENKFGIPYDRAL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + YA A LPG+ + GV +HIGSQ+ ++ AF + L ++LR GH+I+ D+GGG Sbjct: 181 ASYAAARDLPGLDVQGVAVHIGSQLTDLKPLEAAFVKVGALIEKLREAGHDIRTADLGGG 240 Query: 240 LGIAYHSDHR-PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 LG+ Y PPS +DY +++ + +++ EPGR +V + G+L+++V+ +K+ A Sbjct: 241 LGVPYDPSQPLPPSPADYGAMVTRITQGWNVRLLFEPGRLIVGNAGVLLSQVVRVKQGAQ 300 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 FVI+D AMND +RP+LYDA+H+I A++VGP+CETGD A++R + Sbjct: 301 APFVIVDAAMNDLLRPSLYDAWHDIR---AVQPKGDRAAANVVGPVCETGDTFAMHRDMD 357 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 + GDL+ GAYGA + TYNSR L PE++V+G ++ ++R R + LI+ D+IP Sbjct: 358 VVGAGDLVAFMTAGAYGATMASTYNSRALTPEVLVSGDKWAVVRARPPIETLIQGDNIPD 417 Query: 419 WLQ 421 W+Q Sbjct: 418 WVQ 420 >gi|117620267|ref|YP_855006.1| diaminopimelate decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561674|gb|ABK38622.1| diaminopimelate decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 416 Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 178/417 (42%), Positives = 252/417 (60%), Gaps = 4/417 (0%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y +G L AE+ SL++LA TP Y YS +E+++ F A + ++CYA+ Sbjct: 1 MDHFNYDADGQLQAEHTSLQQLAEQYGTPLYVYSRATLERHWHAFDKAAGDIPHLICYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN A++ LA LGSG DIVS GEL R LAA ++VFSGV K+ E+ LAL I Sbjct: 61 KANSNLALLNLLARLGSGFDIVSGGELSRVLAAGGDPAKVVFSGVAKSEAEMRLALDKEI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFN+ESE+EL+ LN+ A +GKKA ++ RVNPDI+A TH ISTG K++KFGIPI Q Sbjct: 121 LCFNLESEAELERLNRVAGGMGKKARVSVRVNPDIDAGTHPYISTGLKQNKFGIPIEQAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y A+ + ++I GVD HIGSQ+ ++ F +A L L L G +I H+DVGGG Sbjct: 181 AIYRKAAAMANIEIVGVDCHIGSQLTELNPFMEAADKLLRLIDGLAVEGIHIHHLDVGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y +PP S+YA + Q ++ EPGR +VA+ G+L+T+V +K + Sbjct: 241 LGVNY-GAEQPPHPSEYAEALKQKLAGRDLTLLFEPGRAIVANAGVLLTRVEYLKPGETR 299 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F ++D MND +RP+LY A+ I + + D+VGP+CETGDF+ R +A Sbjct: 300 NFALIDAGMNDLLRPSLYGAWMNIIEVDSRTAHEP-ALYDVVGPVCETGDFLGKERTLA- 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 G LL + GAYG S YN+R E++V+G+Q +IR R +L + + Sbjct: 358 IAEGSLLAVRSAGAYGFTMSSNYNTRPRAAEVLVDGAQSFLIREREQLADLWRGEHL 414 >gi|148643431|ref|YP_001273944.1| diaminopimelate decarboxylase, LysA [Methanobrevibacter smithii ATCC 35061] gi|222445673|ref|ZP_03608188.1| hypothetical protein METSMIALI_01314 [Methanobrevibacter smithii DSM 2375] gi|148552448|gb|ABQ87576.1| diaminopimelate decarboxylase, LysA [Methanobrevibacter smithii ATCC 35061] gi|222435238|gb|EEE42403.1| hypothetical protein METSMIALI_01314 [Methanobrevibacter smithii DSM 2375] Length = 427 Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 133/433 (30%), Positives = 192/433 (44%), Gaps = 18/433 (4%) Query: 1 MS-AFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVC 56 M K + L +A TP Y I NY F NAF D V Sbjct: 1 MDLNIKINDKNHLDIGGADACDIAEEFGTPTYVIDENRIRDNYNRFYNAFSKYYPDFRVY 60 Query: 57 YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 YA KAN+N AV++ L G +D VS GE+ + P ERI+F+G T +E+ + Sbjct: 61 YACKANTNLAVMRILESEGCCIDAVSPGEVYTSKKLGFPGERILFTGNNVTTEELKFVAE 120 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 G + + V + I+FRVNP + A H TG KFGI + Sbjct: 121 QGAVLNLDSVSALKRLAE---VVDPEGFKISFRVNPMVGAGHHDHCITGGVMSKFGIMDN 177 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFK-LLRDLTQQLRSNGHNIQHID 235 + +Y +A L G+ HIGS I E F A + + + G + + +D Sbjct: 178 EAVEVYQFAEDLGFT-PVGMHSHIGSGILDPEPFKLAIESTIDIAGKVHTEAGIDFEFVD 236 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIH-------QYFGNLQCKIILEPGRFLVADVGILVT 288 GGG+GI Y + +A + + + LEPGR+LV D +L+T Sbjct: 237 FGGGVGIPYTPEENIVDIDTFAKENIALFKSKLEEHDLGKPTMYLEPGRYLVGDASVLLT 296 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 +V S+K+S + F+ +D + +RP +YD+YH I DI G +CE+G Sbjct: 297 RVNSVKQS-YRKFLGVDSGFHTLLRPAMYDSYHHIVLANKMDAPNTQE-VDIAGNVCESG 354 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D A +R + GDLL I GAYG S YNSR E++V + + R R TF+ Sbjct: 355 DLFARDRPMPDVEEGDLLAILNAGAYGFTMSSNYNSRPKASEVLVKDGECFLTRERETFE 414 Query: 409 ELIELDSIPAWLQ 421 +L IP +LQ Sbjct: 415 DLFNKQIIPDYLQ 427 >gi|171462912|ref|YP_001797025.1| diaminopimelate decarboxylase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192450|gb|ACB43411.1| diaminopimelate decarboxylase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 432 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 179/424 (42%), Positives = 244/424 (57%), Gaps = 10/424 (2%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF----DGMDTMVCY 57 S F G+ +AE V L LA TP Y YS A+ + Y + A V Y Sbjct: 12 SGFTERNGNWYAEEVPLTDLAKEFGTPLYVYSKKALTEAYQAYDKACVDANGKRRARVHY 71 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+KANSN AVI L SG D+VS GEL RALA + +VF+GVGK+ EI AL++ Sbjct: 72 AMKANSNLAVIDCFKKLSSGFDLVSGGELARALAIGADPKSLVFAGVGKSAAEIAAALKA 131 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G+ C N ES +EL +NQ A L +API+ RVNPD++A TH ISTG K +KFGI H+ Sbjct: 132 GVKCINAESIAELHKINQVATELKLRAPISLRVNPDVDAQTHPYISTGLKGNKFGIVYHE 191 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + Y AS L + + G+D HIGSQI I + A + DL QL+ G I H+D+G Sbjct: 192 VLKTYREASLLSQIDVVGIDCHIGSQITTIAPYLDALDKVLDLVAQLKKEGIAIHHLDLG 251 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQY--FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 GGLGI+Y + P + +L+++ G ++LEPGR LV + G+L+T V +K Sbjct: 252 GGLGISYSDETPPDITEFTNTLLNRVAERGFGHLDVVLEPGRSLVGNAGVLLTTVEYLKP 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 A+K F I+D +M + MRP LY+A+H I + N + L DIVGP+CE+GD++ NR Sbjct: 312 GAEKNFCIVDASMTELMRPALYEAHHGIVPVKNKPAEAL--TYDIVGPVCESGDWLGRNR 369 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD- 414 +A GDLL I GAYG V + YN+R EIMV+G +IIR R +L + Sbjct: 370 HLA-VEEGDLLAILSAGAYGFVMASNYNTRPKPAEIMVDGKNIYIIRARENTADLFSSEK 428 Query: 415 SIPA 418 ++P Sbjct: 429 TLPN 432 >gi|296284457|ref|ZP_06862455.1| diaminopimelate decarboxylase [Citromicrobium bathyomarinum JL354] Length = 419 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 173/421 (41%), Positives = 257/421 (61%), Gaps = 4/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYAL 59 M FK +G LHAE+V L +A V TP Y YS +E++ F +D ++ +A+ Sbjct: 1 MDHFKLTDGILHAEDVPLPTIAQEVGTPVYVYSRATLERHARVFREGLGELDNPLILFAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN N AV++ L G G D+VS GELRRALAA + ++IVFSGVGKT E++L L +GI Sbjct: 61 KANPNLAVLRVLQREGFGADVVSGGELRRALAAGMTPDKIVFSGVGKTRAELELGLDTGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 FN+ES E + L + A + G+KA A R+NPD++A TH+KISTGK ++KFG+P+H Sbjct: 121 AQFNIESREEGRELAELAAARGEKARCALRINPDVDAGTHEKISTGKADNKFGVPLHHAA 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +A LPG+ + G+ +HIGSQ+ + AF + L QLR GH I +D+GGG Sbjct: 181 EAFAELGALPGLALEGLAIHIGSQLADLAPLETAFGKIGTLLGQLREAGHTITRVDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + PS +DY +++ + + +++ EPGR + + G+L+T+V+ +K+ + Sbjct: 241 LGVPYRTGESFPSPADYGAMVARVTRDWGVQLVFEPGRVIAGNAGVLLTRVVRVKRGLNN 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND RP LY A+H+ + + A+IVGPICETGD A NR Sbjct: 301 PFVIVDAAMNDLARPALYGAWHDFEPVAQT---EERMTANIVGPICETGDTFATNRDCPA 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL GAYGA + +YNSR +PE++V+GS + ++ R+ +++ + +P W Sbjct: 358 LVAGDLAVFRTAGAYGATMASSYNSRGFVPEVLVSGSDYAVVADRIDAGAIMDAERVPEW 417 Query: 420 L 420 L Sbjct: 418 L 418 >gi|94312207|ref|YP_585417.1| diaminopimelate decarboxylase [Cupriavidus metallidurans CH34] gi|93356059|gb|ABF10148.1| diaminopimelate decarboxylase (DAP decarboxylase) [Cupriavidus metallidurans CH34] Length = 419 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 164/418 (39%), Positives = 248/418 (59%), Gaps = 7/418 (1%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 F +G L E V L ++A +P + YS A+ Y ++ A G + V YA+KA Sbjct: 3 DFFSRRDGILAVEQVPLTRIADQFGSPTFVYSRAALTAAYNAYAAACKGRNAHVQYAVKA 62 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN AV++ A LG+G DIVS GEL R +AA ++VFSGV K + +++LAL + Sbjct: 63 NSNLAVLQVFAQLGAGFDIVSGGELLRVIAAGGDPRKVVFSGVAKNVADMELALSHDVRG 122 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 FNVES EL LN A LGK+A ++ R+NPD++A TH ISTG K +KFG+ + Sbjct: 123 FNVESIPELDRLNAVAGRLGKRARVSLRINPDVDAKTHPYISTGLKANKFGVAFEDVLPT 182 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A+ LP ++++G+D HIGSQI ++ + +A + D+ + L + G ++HIDVGGGLG Sbjct: 183 YRAAAALPNIEVTGIDCHIGSQITEVAPYLEALDKVLDVVEALEAEGIKLEHIDVGGGLG 242 Query: 242 IAYHSDHRPPSSSDYASLIHQ---YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 I Y+ + PP + +A+ + G+ +++ EPGR LV + G+L+T+V +K A Sbjct: 243 ITYNDE-TPPDITKFATTLIDRVAARGHGHREVLFEPGRSLVGNAGVLLTRVEFLKPGAA 301 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K F I+D AMND RP +Y+A+H I + + D+VGP+CE+GD++ +R +A Sbjct: 302 KNFCIVDAAMNDLARPAMYEAFHRIEPVAPRNDAG--VMYDVVGPVCESGDWLGRDRTLA 359 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL + GAYG V S YN+R E+MV+G H++R R +L + + Sbjct: 360 -VQAGDLLAVMSAGAYGFVMSSNYNTRGRAAEVMVDGDTVHLVRERELPADLFRNERL 416 >gi|145588275|ref|YP_001154872.1| diaminopimelate decarboxylase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046681|gb|ABP33308.1| diaminopimelate decarboxylase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 432 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 173/421 (41%), Positives = 246/421 (58%), Gaps = 10/421 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNA----FDGMDTMVCYAL 59 F G+ +AE+++L LA TP Y YS +A+ K Y + A + YA+ Sbjct: 14 FSERNGNWYAEDIALADLAREFGTPLYVYSKSALSKAYQAYDKACVDKQGKRRARIHYAM 73 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN AVI LG+G D+VS GEL RALA + +VF+GVGK+ EI AL++G+ Sbjct: 74 KANSNLAVINCFKELGAGFDLVSGGELARALAIGADPKSLVFAGVGKSAKEIAEALKAGV 133 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 C NVES +EL +N+ A LG +API+ RVNPD++A TH ISTG K +KFGI H++ Sbjct: 134 KCINVESIAELHKINRVATELGLRAPISLRVNPDVDAQTHPYISTGLKGNKFGIAYHEVL 193 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y AS L + + G+D HIGSQI + A + DL QL+ G I H+D+GGG Sbjct: 194 KTYREASQLAQIDVVGIDCHIGSQITTTAPYLDALDKVLDLVAQLKKEGIVIHHLDLGGG 253 Query: 240 LGIAYHSDHRPPSSSDYASLIHQY--FGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 LGI+Y + P + +L+++ G ++LEPGR LV + G+L+T V +K A Sbjct: 254 LGISYSDETPPDITDFTDTLLNRVAERGFGHLDVVLEPGRSLVGNAGVLLTTVEYLKPGA 313 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 +K F I+D AM + MRP LY+A+H I + A + D+VGP+CE+GD++ +R + Sbjct: 314 EKNFCIVDAAMTELMRPALYEAHHGIVPV--QAKQAKALTYDVVGPVCESGDWLGRDRHL 371 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SI 416 A GDLL I GAYG V + YN+R EI+V+G ++IR R +L + + Sbjct: 372 A-VEEGDLLAILSAGAYGFVMASNYNTRPKPAEIIVDGKNAYVIRARENTSDLFASEAVL 430 Query: 417 P 417 P Sbjct: 431 P 431 >gi|89099060|ref|ZP_01171939.1| diaminopimelate decarboxylase [Bacillus sp. NRRL B-14911] gi|89086190|gb|EAR65312.1| diaminopimelate decarboxylase [Bacillus sp. NRRL B-14911] Length = 439 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 130/421 (30%), Positives = 197/421 (46%), Gaps = 15/421 (3%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAV 67 L + +LA TP Y Y I + F F+ G+ + V YA KA S+ A+ Sbjct: 14 HLEIGGMDTVELAKQFGTPVYVYDVALIRERARGFRQTFEELGVKSQVAYASKAFSSIAM 73 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 I+ G LD+VS GEL ALAA P ERI F G K+ +E+++AL G+ C V++ Sbjct: 74 IQLAEEEGLSLDVVSGGELYTALAAEFPVERIHFHGNNKSREELEMALHYGVGCIVVDNF 133 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AYA 185 EL+ L + K I RV P I A+TH I TG+++ KFG + + A Sbjct: 134 DELELLKSVCENKNTKTKILLRVTPGIEAHTHDYILTGQEDSKFGFDLQNGQAEAALKQA 193 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGIAY 244 + P ++ G+ HIGSQI + F A + + + + + +++GGG GI Y Sbjct: 194 ISTPWLETLGIHCHIGSQIFETTGFILAAEKIFEKLSIWKKELAYEPAVLNLGGGFGIRY 253 Query: 245 HSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + P ++S Y I + +I +EPGR LV D G + K S K Sbjct: 254 TDEDAPIAASKYVEEIISEVKKLAGSYQMEMPEIWIEPGRSLVGDAGTTLYKTGSRKDVP 313 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + +D M+D +RP LY A +E N ++ I G CE+GD + + Sbjct: 314 NVRHYLAVDGGMSDNIRPALYQAKYEAVL-ANRPLEKAEETVSIAGKCCESGDMLIWDLP 372 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + DLL + TGAYG + YN P + V + ++ R +F++LI LD + Sbjct: 373 LPKAEREDLLAVFCTGAYGYSMANNYNRIPRPPVVFVENGEARLVVKRESFEDLIRLD-L 431 Query: 417 P 417 P Sbjct: 432 P 432 >gi|182418166|ref|ZP_02949466.1| diaminopimelate decarboxylase [Clostridium butyricum 5521] gi|237666166|ref|ZP_04526153.1| diaminopimelate decarboxylase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377984|gb|EDT75524.1| diaminopimelate decarboxylase [Clostridium butyricum 5521] gi|237658256|gb|EEP55809.1| diaminopimelate decarboxylase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 431 Score = 276 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 123/426 (28%), Positives = 201/426 (47%), Gaps = 14/426 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKA 61 K + L L +P Y + I + + N F + + V +A KA Sbjct: 7 MKVEDNQLTIGGAKASDLVKEYGSPLYVFDEELIREYCRDYRNYFRCEENNNRVAFAGKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + K L LD+VS GEL A A P ER++F G KT+DEI+L ++ G+ Sbjct: 67 FLTVQMCKLLKEENMSLDVVSGGELYTAYKAGFPLERVMFHGNNKTLDEIELGVKLGVGN 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIH 179 F V++ E++ LN A S GK I R+ P I A+TH I TG+ + KFG I Sbjct: 127 FVVDNHYEMEVLNDIAKSYGKTQNIYLRITPGIEAHTHDYIKTGQIDSKFGFAPVGTVIE 186 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGG 238 A L + ++G+ HIGSQI +++ + A +++ L ++ ++G+ I+ +D GG Sbjct: 187 DAVEKAINLENINLAGIHCHIGSQIFELQPYEDAVEVMLALVKKIQENHGYFIKEVDFGG 246 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVI 291 G GI Y+ +P ++ +Y I + + +EPGR +VA+ G + V Sbjct: 247 GFGIYYNKGDKPRTTREYCETIINKVDEVCRRTGQERPILTIEPGRSIVANAGSTLYTVG 306 Query: 292 SIKKSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 S+K+ + +D M D +RP LY++ +E + I G CE+GD Sbjct: 307 SVKEIPGVRTYVAVDGGMTDNIRPALYNSAYECVIANRVNSEGGQ-TVTIAGKCCESGDI 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + N ++ GD+L I TGAYG S YN +M+ Q ++ R +++++ Sbjct: 366 LLENVELPEVTSGDILAILTTGAYGYSMSSNYNRIPKPAVVMIRDGQARLVCKRESYEDI 425 Query: 411 IELDSI 416 I D + Sbjct: 426 IRNDVL 431 >gi|296127489|ref|YP_003634741.1| diaminopimelate decarboxylase [Brachyspira murdochii DSM 12563] gi|296019305|gb|ADG72542.1| diaminopimelate decarboxylase [Brachyspira murdochii DSM 12563] Length = 412 Score = 276 bits (705), Expect = 6e-72, Method: Composition-based stats. Identities = 152/412 (36%), Positives = 233/412 (56%), Gaps = 4/412 (0%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSN 64 Y L E++ + +L V +PFY YS I + + F +D ++ YA+KA +N Sbjct: 4 YKNNILMCEDIDIRELTKVYGSPFYLYSKNDILQKIRFLKDIFSSLDDVLIAYAVKAENN 63 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +++K + G G D+VS GE + + A A IVFSGV KT +EI +++ I FN+ Sbjct: 64 LSILKMMVEEGIGADVVSIGESLKYIKAGGDARNIVFSGVAKTEEEIKKSIELNIKRFNI 123 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ES E +N A L K+ + RVNP+++A+TH+KI+TG +KFG+ I I Sbjct: 124 ESIPEAVRINNIAKELKKRVKCSIRVNPNVDAHTHEKITTGVNGNKFGVCIKTIIENSNL 183 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 +L ++I + MHIGSQ+ E F++A ++RDL ++ S G NI ID+GGG G+ Y Sbjct: 184 LKSLDNIEIESLSMHIGSQMTDAEPFYRAILVMRDLINEVNSMGFNITDIDIGGGYGVRY 243 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + DH + + + K+ EPGR+ VA+ G L+ +V +K+ + +VIL Sbjct: 244 NKDHSGFDFDKFKNESINLLKEMNLKVTTEPGRYFVAESGALIMRVEYVKEELGRKYVIL 303 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D MND++R +YDAY+EI +V + D VGPICE+ DF A +R+ ++ GD Sbjct: 304 DGGMNDYVRVAMYDAYNEIYPLVKR---ESVSNYDFVGPICESSDFFAYDRECSVVEEGD 360 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + + GAYG S YNSR LI ++M + + +IIR R TF E+IE + I Sbjct: 361 YVALLDAGAYGFSMSSNYNSRPLIAQVMADKDKHYIIRKRQTFNEMIESEII 412 >gi|170076731|ref|YP_001733369.1| diaminopimelate decarboxylase [Synechococcus sp. PCC 7002] gi|169884400|gb|ACA98113.1| diaminopimelate decarboxylase [Synechococcus sp. PCC 7002] Length = 462 Score = 276 bits (705), Expect = 6e-72, Method: Composition-based stats. Identities = 117/426 (27%), Positives = 191/426 (44%), Gaps = 13/426 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSN 64 + L + +L +P Y + + ++F G +++V YA KA S Sbjct: 38 QDHLVVGGCDVTELVKQYGSPLYILDEYTLRTTCCQYRDSFQKYYGGESLVIYASKAWSC 97 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + G G D+VS GEL L A V ++I F G K+ +E++ AL G+ V Sbjct: 98 MAICAIVDSEGLGFDVVSGGELYTTLKAGVSPQKIYFHGNNKSREELNFALDQGVTII-V 156 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL+ L A I R+ P I +TH+ I TG + KFG +QI + +A Sbjct: 157 DNFFELELLKALTGDRQTTAKIILRLTPGIECHTHEYIRTGHLDSKFGFDPNQIEAAFAL 216 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 S + G+ HIGSQI + + +L ++ G N + +++GGGLGI Y Sbjct: 217 VSQAEFLNCIGLHAHIGSQIFEQQPHKDLGDVLAGWYKKAADYGLNPEILNLGGGLGIRY 276 Query: 245 HSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 PPS ++ + + G K+I+EPGR LV + V S K Sbjct: 277 TESDDPPSIEAWSQNVAQSLEAACRSHGIPLPKLIVEPGRSLVGSACVTAYTVGSRKVVP 336 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + +D M+D RP Y + + N + G CE+GD + + + Sbjct: 337 EIRTYVSVDGGMSDNPRPITYQSLYRAVI-ANRLSAPCEETVTVAGKHCESGDVVIKDAQ 395 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + P+PGD+L + TGAY + YN ++VN + +I R T ++L+ D + Sbjct: 396 LPTPQPGDILVVLATGAYNYSMASNYNRIGRPAAVLVNEGEAQLIIRRETLEDLVRQDCL 455 Query: 417 PAWLQK 422 P L++ Sbjct: 456 PERLRQ 461 >gi|23099288|ref|NP_692754.1| diaminopimelate decarboxylase [Oceanobacillus iheyensis HTE831] gi|22777517|dbj|BAC13789.1| diaminopimelate decarboxylase (dap decarboxylase) [Oceanobacillus iheyensis HTE831] Length = 435 Score = 276 bits (705), Expect = 6e-72, Method: Composition-based stats. Identities = 118/421 (28%), Positives = 188/421 (44%), Gaps = 14/421 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 +G L + LA TP Y Y I N F AF G+ V YA KA S+ Sbjct: 12 EKGHLEIGGLDTLDLAKKYGTPLYVYDVALIRNNARAFVQAFTEKGVKGKVAYASKAFSS 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+++ G LD++SEGEL AL A P ERI G K+I+EI +A+ I C + Sbjct: 72 IAMLQVAKQEGLCLDVISEGELYTALQAEFPTERIHMHGNNKSIEEIRMAVDYEIGCIVI 131 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHSLY 182 ++ ++ L + K+ + RV P + + TH+ I TG ++ KFG + Q + Sbjct: 132 DNFHDIDLLEKVLEEKQKQMDVLIRVTPGVESKTHQYIMTGNEDSKFGFDLQNGQAEQAF 191 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLG 241 ++ G+ HIGSQI + F A LL ++ + + +++GGG G Sbjct: 192 KRLHNHQQIRFQGLHCHIGSQIFETSGFQVATDLLFSELEKWNNKYDYQPNVLNLGGGFG 251 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIK 294 I Y D +P Y + +I +EPGR +V + GI + + S K Sbjct: 252 IRYTKDDQPLPLDKYIKSMADAVQTHVKQLSMEMPEIWIEPGRSIVGNAGITLYTIGSNK 311 Query: 295 KSADKT-FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + +D M D +RP LY+A +E N + + I G CE+GD + Sbjct: 312 QIPGIREYYSIDGGMTDNIRPALYNAAYEAVI-ANHPKNPIEKEVSIAGKCCESGDMLIW 370 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + GD+L + TGAY + YN + V + ++ R T+Q+++ Sbjct: 371 DLPVPEINSGDVLAVFSTGAYSYSMASHYNRLPNAAVVFVENGRDQLVVRRETYQDVVRN 430 Query: 414 D 414 D Sbjct: 431 D 431 >gi|114326793|ref|YP_743950.1| diaminopimelate decarboxylase [Granulibacter bethesdensis CGDNIH1] gi|114314967|gb|ABI61027.1| diaminopimelate decarboxylase [Granulibacter bethesdensis CGDNIH1] Length = 448 Score = 276 bits (705), Expect = 6e-72, Method: Composition-based stats. Identities = 175/425 (41%), Positives = 253/425 (59%), Gaps = 7/425 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYA 58 M A +G L ++V L +A TP + YS + Y +A + +A Sbjct: 28 MHAM---DG-LLLDDVPLNAIADAQGTPCWVYSAGTFRRRYRLLRDALAEAGIAPHIHFA 83 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN + AV++ L + G+G D+VS GEL RA AA +P ERIVFSGVGKT E+ LAL G Sbjct: 84 VKANDHLAVLRLLGNEGAGADVVSGGELSRARAAGIPGERIVFSGVGKTAAELTLALSEG 143 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I NVES EL+ L+ A +G+ A IA RVNPD++A TH KI+TG ++KFGI + Sbjct: 144 IAQINVESAEELEMLSAIACGMGRTARIALRVNPDVDAGTHPKITTGLADNKFGIQAGDV 203 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 +LYA A++LPG++ G+ MHIGSQI+ + F AF+ + L Q LR G ++ +D GG Sbjct: 204 PALYARAASLPGIEPVGLAMHIGSQINVMTPFLAAFRRMAILVQALRDQGLTVRLVDCGG 263 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 GLGI Y D + + A + G L +++LEPGR+L G+L++ V+ +K+S Sbjct: 264 GLGIDYRGDVTS-TPAALAGAMKAELGGLDVQLVLEPGRWLAGPAGVLLSSVVLVKQSRP 322 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + FV+LD AMND +RP+LY+A+H I + + I D+VGP+CETGD A +R + Sbjct: 323 RPFVVLDAAMNDLLRPSLYEAWHGIVPLSAVEAAHMPIDCDVVGPVCETGDTFARSRSLP 382 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 + G + I + GAYGAV S TYN+R L +++V+ + +IRPR T L + IP Sbjct: 383 PLQGGSRVAILEAGAYGAVMSSTYNARPLAAQVLVDDGHWAVIRPRQTVDALWRDEVIPP 442 Query: 419 WLQKT 423 L + Sbjct: 443 HLTRQ 447 >gi|148827915|ref|YP_001292668.1| diaminopimelate decarboxylase [Haemophilus influenzae PittGG] gi|148719157|gb|ABR00285.1| diaminopimelate decarboxylase [Haemophilus influenzae PittGG] Length = 450 Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats. Identities = 173/392 (44%), Positives = 247/392 (63%), Gaps = 2/392 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKHNKLYAEDIPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGNASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ +++ Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + P S +L+ + + +IILEPGR + A+ GILV KV +K + + Sbjct: 241 GVTYTDETPPHPSDYANALLEKLKDYPELEIILEPGRAISANAGILVAKVQYLKSNESRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I D MND +RP LY+AY I I R D+VGP+CET DF+ R+++ Sbjct: 301 FAITDTGMNDMIRPALYEAYMNIVEIDRTLA-REKAIYDVVGPVCETSDFLGKQRELS-I 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 GD + GAYGA S YNSR E+ Sbjct: 359 AEGDYIAQCSAGAYGASMSSNYNSRARTAEVF 390 >gi|261349779|ref|ZP_05975196.1| diaminopimelate decarboxylase [Methanobrevibacter smithii DSM 2374] gi|288860563|gb|EFC92861.1| diaminopimelate decarboxylase [Methanobrevibacter smithii DSM 2374] Length = 427 Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats. Identities = 133/433 (30%), Positives = 192/433 (44%), Gaps = 18/433 (4%) Query: 1 MS-AFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVC 56 M K + L +A TP Y I NY F NAF D V Sbjct: 1 MDLNIKINDKNHLDIGGADACDIAEEFGTPTYVIDENRIRDNYNRFYNAFSKYYPDFRVY 60 Query: 57 YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 YA KAN+N AV++ L G +D VS GE+ + P ERI+F+G T +E+ + Sbjct: 61 YACKANTNLAVMRILESEGCCIDAVSPGEVYTSKKLGFPGERILFTGNNVTTEELKFVAE 120 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 G + + V + I+FRVNP + A H TG KFGI + Sbjct: 121 QGAVLNLDSVSALKRLAE---VVDPEGFKISFRVNPMVGAGHHDHCITGGVMSKFGIMDN 177 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFK-LLRDLTQQLRSNGHNIQHID 235 + +Y +A L G+ HIGS I E F A + + + G + + +D Sbjct: 178 EAVEVYQFAEDLGFT-PVGMHSHIGSGILDPEPFKLAIESTIDIAGKVHTEAGIDFEFVD 236 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIH-------QYFGNLQCKIILEPGRFLVADVGILVT 288 GGG+GI Y + +A + + + LEPGR+LV D +L+T Sbjct: 237 FGGGVGIPYTPEENIVDIDTFAKENIALFKSKLEEHDLGKPTMYLEPGRYLVGDASVLLT 296 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 +V S+K+S + F+ +D + +RP +YD+YH I DI G +CE+G Sbjct: 297 RVNSVKQS-YRKFLGVDSGFHTLLRPAMYDSYHHIVLANKMDAPNTQE-VDIAGNVCESG 354 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D A +R + GDLL I GAYG S YNSR E++V + + R R TF+ Sbjct: 355 DLFARDRPMPNVEEGDLLAILNAGAYGFTMSSNYNSRPKASEVLVKDGECFLTRERETFE 414 Query: 409 ELIELDSIPAWLQ 421 +L IP +LQ Sbjct: 415 DLFNKQIIPDYLQ 427 >gi|32267006|ref|NP_861038.1| diaminopimelate decarboxylase [Helicobacter hepaticus ATCC 51449] gi|32263058|gb|AAP78104.1| diaminopimelate decarboxylase [Helicobacter hepaticus ATCC 51449] Length = 424 Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats. Identities = 166/398 (41%), Positives = 234/398 (58%), Gaps = 4/398 (1%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA QTP Y Y I + + +AF +++CYALKANSN ++I LA LGSG D Sbjct: 8 ALADTYQTPLYVYDLERITQAFCAIKDAFKARKSLICYALKANSNLSIIHHLAQLGSGAD 67 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 VS GE+RRAL A +P +I+FSGVGK +EI+ ALQS I NVESE EL + A Sbjct: 68 CVSIGEVRRALRAGIPKYKIIFSGVGKQDNEIEEALQSDILFLNVESEEELLRIESIAKK 127 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 L K A I+ RVNP+I+A TH ISTG E+KFG+ I Q S+Y +A ++ G+ H Sbjct: 128 LDKIARISVRVNPNIDAKTHPYISTGLNENKFGVDIEQAKSMYIFAKNAQFLEPIGIHFH 187 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 IGSQI +E ++ + + LT L + +++ D+GGG+GI Y + + DYA Sbjct: 188 IGSQITDLEPIKQSAQKIAQLTHSLLALKIDLKFFDIGGGIGIRYTDESLI-NPYDYAQA 246 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 I + L II EPGRFLV + G+L+T+V+ K + K FVI+D AMND MRP LY A Sbjct: 247 ILEALYGLDLTIICEPGRFLVGESGVLLTRVLYEKHNGHKRFVIVDAAMNDLMRPALYRA 306 Query: 320 YHEINYIVNP---AGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 H++ Y + DIVGPICE+ D++A N K+ + GD+L ++ GAYG Sbjct: 307 THQVEYFLKDKRVDSSLESSLCDIVGPICESSDYLAKNIKLPPLQAGDVLVLKNAGAYGY 366 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YN+R E+ + +I+ R +F+++IE + Sbjct: 367 SMASNYNTRPRPAEVALMQGNARLIKHRESFEKMIEDE 404 >gi|325282864|ref|YP_004255405.1| diaminopimelate decarboxylase [Deinococcus proteolyticus MRP] gi|324314673|gb|ADY25788.1| diaminopimelate decarboxylase [Deinococcus proteolyticus MRP] Length = 454 Score = 275 bits (703), Expect = 9e-72, Method: Composition-based stats. Identities = 126/419 (30%), Positives = 190/419 (45%), Gaps = 14/419 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L + +LA TP + Y I + F A G+D V YA KA +A Sbjct: 35 GELVIGGLPAPELAERFGTPLFVYDEALIREQCRRFHRALQKTGLDHQVSYASKAFLCRA 94 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + +A G GLD+VS GEL ALAA I G K E+ AL +G+ C+ V+S Sbjct: 95 LARLMAEEGLGLDVVSGGELYTALAAGFDPAHIHLHGNNKLDSELRRALAAGVGCYVVDS 154 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ LN A LG +A RV P + A+TH I TG + KFG+ + + A + Sbjct: 155 LDEVARLNTLAGELGTRARCLLRVTPGVEAHTHDFIQTGAADSKFGLNLASGQASEALRA 214 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGIA 243 L + + GV HIGSQI E A + + +G + +++GGG GI Sbjct: 215 MLQAEWLDVLGVHFHIGSQIFGTEGTRAALARVLAWLAGEREHSGFAARVLNIGGGFGIR 274 Query: 244 YHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y +P D ++ LEPGR +V + G + V ++K+ Sbjct: 275 YTGADQPQPLEDLLAEVAAALRAGAAEHRLPLPQLWLEPGRSIVGEAGWTLYTVGTVKQI 334 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +V +D M+D +R LY A +E + N +VG +CE+GD +A ++ Sbjct: 335 PGVRNYVSVDGGMSDHLRTALYGADYE-VALANRMHGAPQGTYTVVGKLCESGDVVARDK 393 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + PR GDLL + TGAY S YN+ L + V + + R T+ +L+ Sbjct: 394 PLPEPRHGDLLAVSCTGAYHYAMSSRYNAMLRPAVVFVKDGEAREVVRRETYDDLLRGQ 452 >gi|291277519|ref|YP_003517291.1| diaminopimelate decarboxylase [Helicobacter mustelae 12198] gi|290964713|emb|CBG40568.1| diaminopimelate decarboxylase [Helicobacter mustelae 12198] Length = 412 Score = 275 bits (703), Expect = 9e-72, Method: Composition-based stats. Identities = 161/398 (40%), Positives = 229/398 (57%), Gaps = 1/398 (0%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++LA TP Y Y I+ N+L + +AF G +++CYALKANSN +VIK +A L Sbjct: 7 DFQQLAEDYGTPLYVYDMEKIKANFLAYKDAFSGRKSLICYALKANSNLSVIKIIAELDG 66 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D VS GE++RA+ A + RI+FSGVGK EI AL+ GI NVES +EL + Sbjct: 67 GADCVSIGEVKRAILAGIKPYRIIFSGVGKKDSEIKEALKIGILFINVESYAELLRVEAV 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A LG A I+ RVNP+I+ TH ISTG E+KFG+ + + +Y YA ++ GV Sbjct: 127 AKELGSIARISVRVNPNIDPKTHPYISTGLSENKFGVEMEEARRMYLYAHKSDFLQPIGV 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 HIGSQ+ Q++ ++ + + D + L + G +++ DVGGG+GI Y + DY Sbjct: 187 HFHIGSQLTQLDPIAQSTQKIADFARGLVAIGIDLKFFDVGGGVGICYKDEGV-FDIHDY 245 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 A I L II EPGR +V + G LVT+V+ K + K FVI+D AMND +RP+L Sbjct: 246 AQSILSKLSGLDVTIICEPGRSIVGNSGYLVTQVLYEKHTPKKRFVIVDGAMNDLLRPSL 305 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 YDA+H ++ I + AD+VGPICE+ DF+A N ++ GD + E GAYG Sbjct: 306 YDAHHGVSVIKQRKEEGELSLADVVGPICESADFLAKNIELPPMHAGDFVIFENAGAYGF 365 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R E+ V ++R R + + LI + Sbjct: 366 SMSSNYNTRGRCAEVGVQKEGVFLLRRRESLEFLIRDE 403 >gi|254414419|ref|ZP_05028185.1| diaminopimelate decarboxylase [Microcoleus chthonoplastes PCC 7420] gi|196178649|gb|EDX73647.1| diaminopimelate decarboxylase [Microcoleus chthonoplastes PCC 7420] Length = 469 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 120/422 (28%), Positives = 187/422 (44%), Gaps = 13/422 (3%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQAV 67 L ++ L +P Y + + +AF DT+V YA KA + A+ Sbjct: 45 LEIGGCDVQGLIEEFGSPLYILDEVTVRTACRQYRDAFARYYSGDTLVLYASKAWNCLAI 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 A G G+D+VS GEL AL A VPA+++ F G K+I E+ LA++S Sbjct: 105 CAIAASEGLGVDVVSGGELYTALEAGVPADKLYFHGNNKSIAELQLAIESHCTIVVDNQL 164 Query: 128 S-ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E + S + I R+ P I +TH I TG + KFG H + +++A+ S Sbjct: 165 ELETLADLAQKTSPDTQVRIMIRITPGIECHTHDYIRTGHLDSKFGFDPHTLDNVFAFIS 224 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 P + G+ HIGSQI + + +L D Q+ +IQ ++VGGGLGI Y Sbjct: 225 QNPILDCIGLHAHIGSQIFESQPHKDLGAVLVDYLQKAAQFNLSIQELNVGGGLGIRYTE 284 Query: 247 DHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADK 299 D PP+ + + + N + ++ EPGR ++ + + S K+ Sbjct: 285 DDDPPTIDAWVKGVCEAVVNACNQQQLPLPRLLSEPGRSIIGPACVTAYTIGSRKEIPQT 344 Query: 300 TFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 +D M+D RP Y + + N + I G CE+GD + + ++ Sbjct: 345 RTYLAVDGGMSDNPRPITYQSVYRPVV-ANRMSAPITETVTIAGKHCESGDILLKDAQLP 403 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 +PGDLL I TGAY + YN ++V +I R T+Q+LI D +P Sbjct: 404 ETQPGDLLVIMGTGAYNYSMASNYNRVPRPAAVLVKDGTAELIVQRETYQDLIRFDHLPK 463 Query: 419 WL 420 L Sbjct: 464 RL 465 >gi|300856974|ref|YP_003781958.1| diaminopimelate decarboxylase [Clostridium ljungdahlii DSM 13528] gi|300437089|gb|ADK16856.1| diaminopimelate decarboxylase [Clostridium ljungdahlii DSM 13528] Length = 428 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 125/428 (29%), Positives = 203/428 (47%), Gaps = 13/428 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT-MVCYAL 59 M + + L+ +S +L +TP Y + + +F+ V YA Sbjct: 1 MGSMEIRNNVLYIGGMSTGELVKEFKTPLYVMDEELVRDRCRRYYKSFEADKANKVTYAG 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA A+ + + G LD+VS+GEL AL + P E++ F G KT+DEID+ ++ G+ Sbjct: 61 KAFLTLAMCQIINSEGLYLDVVSDGELYTALKSGFPMEKVYFHGNNKTLDEIDMGVKLGV 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 F V++ E++ +N A GK I RV P I A+TH I TG+ + KFG + Sbjct: 121 GKFVVDNFYEMEKINSAAKKYGKIQEILLRVTPGIEAHTHDYIKTGQIDSKFGFTMLNNE 180 Query: 180 SLY--AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDV 236 + A P +K G+ HIGSQI + + + +++ +L ++++ G ++ +D+ Sbjct: 181 VMNIIKSAVDFPNLKFVGIHCHIGSQIFETKPYEDEVEIMLNLVKKIKDELGREVEELDL 240 Query: 237 GGGLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 GGG GI Y +P S D+ A + +++EPGR ++ + G + Sbjct: 241 GGGFGIYYTEGDKPKSVEDFCSIILQKAKEKAKELDLKLPILVIEPGRSIIGNAGTTLYT 300 Query: 290 VISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V SIK +D M D +RP LY A +E N D + I G CE+G Sbjct: 301 VGSIKNIPGVRKYVSVDGGMADNIRPALYGAKYECVL-ANRVNDSVKETVTIAGKSCESG 359 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + ++ R GD+L + TGAYG S YN ++V + +I R TF Sbjct: 360 DILIKDVELPESRSGDILAVFTTGAYGYSMSSNYNKIPKPAAVLVKEGKARLIAKRQTFD 419 Query: 409 ELIELDSI 416 +LIE + + Sbjct: 420 DLIENEIM 427 >gi|134298993|ref|YP_001112489.1| diaminopimelate decarboxylase [Desulfotomaculum reducens MI-1] gi|134051693|gb|ABO49664.1| diaminopimelate decarboxylase [Desulfotomaculum reducens MI-1] Length = 447 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 126/440 (28%), Positives = 205/440 (46%), Gaps = 14/440 (3%) Query: 4 FKYFEG-SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF-DGMDTMVCYALKA 61 ++ + L +LA TP Y +N + +F + T V YA K Sbjct: 7 MRFNDKRHLEIGGCDTVELAKKYGTPLYVIDEALFRQNCQNYYRSFTEEYGTEVIYASKT 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 SN A+ + G GLD+VS GEL A A P ER+ F G K+ DE+ LAL + Sbjct: 67 LSNLAICTIVEQEGLGLDVVSGGELFTAAKARFPMERVYFHGNNKSPDELRLALDYKVGR 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V++ EL+ LN A KA I R++P + A+TH+ I TG+ + KFG+ I ++ Sbjct: 127 IVVDNLYELELLNAIAGEKDTKASIILRLSPGVEAHTHEYIKTGQIDSKFGLAIENGMAM 186 Query: 182 YAYASTLPGVK--ISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGG 238 A +L + G+ HIGSQI ++ S+ A +++ + + + G+ + +++GG Sbjct: 187 SAVMRSLELSNILLKGIHCHIGSQIFELASYAHAAEVMMNFVQKIFQETGYLAEELNLGG 246 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVI 291 GLGI Y P S +YA ++ F K+I+EPGR + G + ++ Sbjct: 247 GLGIYYSEGDYPRSVKEYADILMSAVRAKAAEFDIPAPKVIVEPGRSISGPSGTTLYRIG 306 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 +IK +D M+D RP LY + +E + N + I G CE+GD Sbjct: 307 AIKDIPGIRKYVSVDGGMSDNPRPALYKSKYE-ACLANRVNEEPIEQVSIAGKCCESGDM 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + K+ + GD+L I TGAY S YN ++V + +I R + ++ Sbjct: 366 LIWDIKLPVITTGDILAISCTGAYNYSMSMNYNRLPRPAMVLVCEGKADLIVKREDYADI 425 Query: 411 IELDSIPAWLQKTPKQSSEN 430 I D +P L + + + + Sbjct: 426 IRNDVMPQRLCNSRIKLASS 445 >gi|57234679|ref|YP_181278.1| diaminopimelate decarboxylase [Dehalococcoides ethenogenes 195] gi|57225127|gb|AAW40184.1| diaminopimelate decarboxylase [Dehalococcoides ethenogenes 195] Length = 434 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 127/423 (30%), Positives = 192/423 (45%), Gaps = 12/423 (2%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKAN 62 + L + L TP Y + I +N F F D+ V YA KA Sbjct: 13 EVKNNRLVIGGADVAGLCAKYGTPLYVFDEATIRQNCRDFKREFSRRYADSSVSYASKAF 72 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + A++K LA G LD+VS GEL A +A P + + F G K+ DE+ LAL+ + Sbjct: 73 LHPALLKILAEEGMSLDVVSGGELSIASSAGFPMDMVYFHGNNKSADELRLALRLHVGRI 132 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V+S E+K L++ A G I R+ P ++A+TH I+TGK + KFG P+ Q Sbjct: 133 VVDSFDEIKLLSKLADESGHIPDILLRLTPGVDAHTHHHITTGKLDSKFGFPLFQAAEAV 192 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLG 241 A + + G HIGSQI + + F A L+ + Q G +I+ +D+GGG G Sbjct: 193 GLAMAQASLNLVGFHFHIGSQIFETQPFLDAIDLVLEFAAQVQERYGFDIEELDIGGGYG 252 Query: 242 IAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y D P S YA + +EPGR ++A G+ + V IK Sbjct: 253 VQYEVDKPAPQVSVYAEAIGAKIVSKCHSLKLTPPSLNIEPGRAVIAQAGVALYTVGVIK 312 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 +D M D +RP LY+A +E N + G CE+GD + Sbjct: 313 DIPGIRVYASVDGGMGDNIRPALYEAKYEAVV-ANNVQSSEKQKVTVAGKFCESGDILIT 371 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + ++ + + GD+L + GAY S YN +M+ + +IR R T ++L L Sbjct: 372 DIELPVLKTGDILAVPCCGAYCLPMSSNYNGYQRPAVVMLKNGEDRLIRRRETVEDLSRL 431 Query: 414 DSI 416 DS+ Sbjct: 432 DSV 434 >gi|317128511|ref|YP_004094793.1| diaminopimelate decarboxylase [Bacillus cellulosilyticus DSM 2522] gi|315473459|gb|ADU30062.1| diaminopimelate decarboxylase [Bacillus cellulosilyticus DSM 2522] Length = 444 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 121/421 (28%), Positives = 188/421 (44%), Gaps = 12/421 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSN 64 +G L V KL TP + Y I F +AF+ + V YA KA S+ Sbjct: 11 EQGHLEIGGVDTTKLVEKYGTPLFVYDVKDIVNRAQAFKSAFEEENIEYQVAYASKAFSS 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + + LG LD+VS GEL AL + P ERI F G K+ DEI++A++ GI C V Sbjct: 71 IAMFQLIDELGLSLDVVSGGELYTALKSNFPVERIHFHGNNKSPDEIEMAVKEGIGCIVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHSLY 182 ++ +EL L SL K+ + R+ P + A+TH+ ISTG+++ KFG I Q Sbjct: 131 DNFTELSWLMAITQSLKKEMKVLIRITPGVEAHTHEYISTGQEDSKFGFDIQSGQAEKAI 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 V++ GV HIGSQI + + F A + + + ++ G+ +++GGG G Sbjct: 191 MMIQEHQYVQLEGVHSHIGSQIFETDGFTSAVEAIYNHLLTWKNKLGYEPNVLNLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y + P +Y Q F ++ +EPGR LV + G + + S K Sbjct: 251 IKYTIEDEPLPLEEYVQAMVKAVKHYAQKFNMTLPEVWIEPGRSLVGEAGTTIYSIGSRK 310 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + + I N + I G CE+GD + + Sbjct: 311 EIPGIRTYVSVDGGMTDNIRPALYQAKYAAQIANKMDGKSEELVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ GDLL + TGAYG + YN L I V Q + R ++++L++ + Sbjct: 371 IELPKTEAGDLLAVFSTGAYGYSMANNYNRILRPAVIFVEDGQEQCVIKRESYEDLVKNE 430 Query: 415 S 415 Sbjct: 431 V 431 >gi|258515316|ref|YP_003191538.1| diaminopimelate decarboxylase [Desulfotomaculum acetoxidans DSM 771] gi|257779021|gb|ACV62915.1| diaminopimelate decarboxylase [Desulfotomaculum acetoxidans DSM 771] Length = 447 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 142/426 (33%), Positives = 198/426 (46%), Gaps = 13/426 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF-DGMDTMVCYALKANSNQAV 67 G L N L TP Y N + AF D ++ V YA K N AV Sbjct: 13 GHLTIGNCDTVDLVREYSTPLYVLDEKYFRSNCREYYRAFSDRFNSDVIYASKTLLNTAV 72 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LDIVS GEL AL A PA R+ F G KT DE+ LAL++G+ + V++ Sbjct: 73 CRMIEEEGLCLDIVSGGELYTALKAGFPASRMYFHGNNKTTDELKLALEAGVGRYIVDNL 132 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYA 185 EL+ LN A A I R+ P + A+TH+ I TG+ + KFG+ I ++ A Sbjct: 133 YELELLNNMAGKANITADILLRITPGVEAHTHEYIKTGQIDSKFGLAIETGQAMEGTKKA 192 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L V++ G HIGSQI ++ESF A ++ +R+ +D+GGGLGI Y Sbjct: 193 LNLANVRLHGFHCHIGSQIFELESFAHAANIMMSFINNVRTETAFTAAELDLGGGLGIYY 252 Query: 245 HSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 P + A + KI++EPGR + GI + V S+K Sbjct: 253 FEGDEPKPVKELADIIINEVRKQADEYCLPVPKIMVEPGRSISGPAGITLYTVGSVKDIP 312 Query: 298 DKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + +D MND RP LY + +E N ++ I G CE+GD + + K Sbjct: 313 GIRKYVAVDGGMNDNPRPALYQSRYEAAL-ANKMNEKETELVSIAGKCCESGDMLIKDTK 371 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + PGD+L + TGAY S YN I+VN +I R TF++LI D I Sbjct: 372 LPPAEPGDVLVVTSTGAYNYAMSMNYNRITRPAMILVNEGAAEVIVQRETFEDLIRNDLI 431 Query: 417 PAWLQK 422 P LQK Sbjct: 432 PKHLQK 437 >gi|73748375|ref|YP_307614.1| diaminopimelate decarboxylase [Dehalococcoides sp. CBDB1] gi|73660091|emb|CAI82698.1| diaminopimelate decarboxylase [Dehalococcoides sp. CBDB1] Length = 434 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 128/423 (30%), Positives = 193/423 (45%), Gaps = 12/423 (2%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKAN 62 + L V + L TP Y + I +N F F D+ + YA KA Sbjct: 13 EVKNNHLIIGGVDVAGLCAKYGTPLYIFDELTIRQNCRDFKREFSRRYADSSISYASKAF 72 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + A++K LA G LD+VS GEL A A P + + G K+ +E+ LAL+ + Sbjct: 73 LHPALLKILAEEGMSLDVVSGGELSVANNAGFPMDMVYLHGNNKSAEELRLALRLHVGRI 132 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V+S E+K L++ A G I R+ P ++A+TH+ I+TGK + KFG P+ Q Sbjct: 133 VVDSFDEIKLLSKLADESGHIPDILLRITPGVDAHTHQHITTGKLDSKFGFPLFQAAEAV 192 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLG 241 A + + G HIGSQI + + F A L+ D Q G +I+ +D+GGG G Sbjct: 193 GLAMAQASLNLVGFHFHIGSQIFETQPFLDAIDLVLDFAAQVQERYGFDIEELDIGGGYG 252 Query: 242 IAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y D P S YA + + +EPGR ++A G+ + V IK Sbjct: 253 VQYEVDKPAPPISAYAEAIGAKVVSKCRSLKLTPPSLNIEPGRAIIAQAGVALYTVGVIK 312 Query: 295 KSADKT-FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + +D M D +RP LY+A +E N I G CE+GD + Sbjct: 313 DIPGIRLYASVDGGMGDNIRPALYEAKYEAVV-ANNVQSAEKEKVTIAGKFCESGDILIR 371 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + ++ R GD+L + GAY S YN +M+ + +IR R T ++L L Sbjct: 372 DIELPSLRTGDILAVPCCGAYCLPMSSNYNGYHRPAVVMLKNGEDRLIRRRETVEDLSRL 431 Query: 414 DSI 416 DS+ Sbjct: 432 DSV 434 >gi|84490355|ref|YP_448587.1| hypothetical protein Msp_1578 [Methanosphaera stadtmanae DSM 3091] gi|84373674|gb|ABC57944.1| LysA [Methanosphaera stadtmanae DSM 3091] Length = 429 Score = 274 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 136/430 (31%), Positives = 197/430 (45%), Gaps = 16/430 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALK 60 K L N+ +LA +TP Y + NY AF D +CYA K Sbjct: 6 NLKKENNHLIIGNIDANELAEKYKTPLYVIDEEKVRNNYNKLYTAFNSKYEDLHMCYAAK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N AV+K L GS +D VS GE+ AL A ERIVF+G T +E++ A ++G+ Sbjct: 66 ANTNLAVMKILEDEGSYIDAVSPGEIYTALLAGFTPERIVFTGNNVTNEELEYAHKTGVT 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 + K I+ RVNP + A H+ TG + KFGI + Sbjct: 126 INLDSI---SALERLSTIEGTKGKEISIRVNPMVEAGHHEHCITGGPKSKFGIKEEEAVE 182 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGG 239 +Y A L K G+ HIGS+I + E F A + + D+ + + G + + +D GGG Sbjct: 183 VYQKAIDLGF-KPIGMHSHIGSEILESEPFMLAVETMMDIAGKVHKEVGVDFKFLDFGGG 241 Query: 240 LGIAYHSDHRPPS-------SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y + + + + +EPGRFLV + +L+T+V + Sbjct: 242 FGIPYEPTENELDLETFTTDIIKLFKSKLEEYDMGKPAMYIEPGRFLVGNAEVLLTRVNT 301 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 IK+S + F +D +RPT+Y +YH I N + DI G +CE+GD A Sbjct: 302 IKES-YRKFAGVDCGFGTLLRPTMYGSYHHIVV-ANKINEENVEEIDIAGNLCESGDLFA 359 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 +R + GDLL I GAY + YNSR E++VN + +IR R F +L Sbjct: 360 RDRPMPKLEEGDLLAILNAGAYAYSMASQYNSRPRPAEVLVNKDEVDVIRRREEFSDLFN 419 Query: 413 LDSIPAWLQK 422 IP L K Sbjct: 420 GQKIPTRLLK 429 >gi|313903676|ref|ZP_07837065.1| diaminopimelate decarboxylase [Thermaerobacter subterraneus DSM 13965] gi|313465864|gb|EFR61389.1| diaminopimelate decarboxylase [Thermaerobacter subterraneus DSM 13965] Length = 445 Score = 274 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 129/426 (30%), Positives = 200/426 (46%), Gaps = 13/426 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L +L TP Y I + + A G + YA KA A++ Sbjct: 21 GHLVIGGADAVELVERFGTPLYVLDEAVIRQRCRAYREAMGGAGV-IAYAAKALCTTAIL 79 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G +D VS GEL ALAA PA RI+ G K+ +E+ LA+++G+ V++ Sbjct: 80 RIMDQEGLWVDAVSAGELHTALAAGFPAGRILLHGNNKSDEELRLAIETGVGRVVVDNFH 139 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 EL L A + G+ P+ RV P + A+TH+ I TG++E KFG + L A L Sbjct: 140 ELDRLAAMARAAGRSVPVLLRVAPGVEAHTHEFIRTGQQESKFGFDLATGQVLEALDRVL 199 Query: 189 PGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYH 245 G HIGSQI +E + +A +++ DL + R G ++ +D+GGGLGI Y Sbjct: 200 DEPALDWHGFHCHIGSQILAVEPWEQAARIMMDLAAEAHRRTGRFVRELDLGGGLGIRYV 259 Query: 246 SDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 PPS ++ + I ++ILEPGR +V + G+ + V S+K+ Sbjct: 260 PGDEPPSIAETVTRIRTAVERAAGERGLPVPRLILEPGRSIVGEAGVTLYTVGSVKRVPG 319 Query: 299 -KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 +V +D M D R LY A + + N D +VG CE+GD + ++ Sbjct: 320 LMPYVAVDGGMADNPRYALYRALY-TAVLANRPLDEPAERVCLVGRYCESGDILIPEIEL 378 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 PGD++ + TGAY S YN ++V + +I R T+ +L+ D IP Sbjct: 379 PRVEPGDVVAVFSTGAYNYSMSSQYNRFPRPAMVLVREGEAAVIVERETYDDLLRHDRIP 438 Query: 418 AWLQKT 423 L++ Sbjct: 439 PSLERE 444 >gi|147669155|ref|YP_001213973.1| diaminopimelate decarboxylase [Dehalococcoides sp. BAV1] gi|146270103|gb|ABQ17095.1| diaminopimelate decarboxylase [Dehalococcoides sp. BAV1] Length = 434 Score = 274 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 129/423 (30%), Positives = 192/423 (45%), Gaps = 12/423 (2%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKAN 62 + L V + L TP Y + I +N F F D+ V YA KA Sbjct: 13 EVKNNHLIIGGVDVAGLCAKYGTPLYIFDELTIRQNCRDFKREFSRRYADSSVSYASKAF 72 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + A++K LA G LD+VS GEL A A P + + G K+ +E+ LAL+ + Sbjct: 73 LHPALLKILAEEGMSLDVVSGGELSVANNAGFPMDMVYLHGNNKSAEELRLALRLHVGRI 132 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V+S E+K L++ A G I R+ P ++A+TH I+TGK + KFG P+ Q Sbjct: 133 VVDSFDEIKLLSKLADESGHIPDILLRITPGVDAHTHHYITTGKLDSKFGFPLFQAAEAV 192 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLG 241 A + + G HIGSQI + + F A L+ D Q G +I+ +D+GGG G Sbjct: 193 GLAMAQASLNLVGFHFHIGSQIFETQPFLDAIDLVLDFAAQVQERYGFDIEELDIGGGYG 252 Query: 242 IAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y D P S YA + + +EPGR ++A G+ + V IK Sbjct: 253 VQYEVDKPAPPISAYAEAIGAKVVSKCRSLKLTPPSLNIEPGRAIIAQAGVALYTVGVIK 312 Query: 295 KSADKT-FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + +D M D +RP LY+A +E N I G CE+GD + Sbjct: 313 DIPGIRLYASVDGGMGDNIRPALYEAKYEAVV-ANNVQSAEKEKVTIAGKFCESGDILIR 371 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + ++ R GD+L + GAY S YN +M+ + +IR R T ++L L Sbjct: 372 DIELPSLRTGDILAVPCCGAYCLPMSSNYNGYHRPAVVMLKNGEDRLIRRRETVEDLSRL 431 Query: 414 DSI 416 DS+ Sbjct: 432 DSV 434 >gi|257459021|ref|ZP_05624140.1| diaminopimelate decarboxylase [Campylobacter gracilis RM3268] gi|257443406|gb|EEV18530.1| diaminopimelate decarboxylase [Campylobacter gracilis RM3268] Length = 437 Score = 274 bits (699), Expect = 3e-71, Method: Composition-based stats. Identities = 168/435 (38%), Positives = 234/435 (53%), Gaps = 36/435 (8%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + LA TP Y Y I+KN++ F ++VC+A+KANSN +V+K L+ LG Sbjct: 1 MDYSSLARKYGTPLYVYDFNEIQKNFIALKEVFAARKSLVCFAIKANSNLSVLKFLSDLG 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GELRRAL + +I+FSGVGK E++ AL+S I N+ESE+E+ L + Sbjct: 61 SGFDCVSIGELRRALYVGAKSYKIIFSGVGKQDGELEFALKSDILLINLESEAEMLRLER 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L K A I+ RVNP+++A TH ISTG E+KFG+ I +Y YA + G Sbjct: 121 IAQKLNKPARISIRVNPNVDAKTHPYISTGLNENKFGVNIETARKMYIYAKKSKFLNPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIGSQ+ I A K++ DL ++LR+ +I+ DVGGG+GI Y + + D Sbjct: 181 IHFHIGSQLTDISPICDAAKIVSDLLRELRALEIDIKFFDVGGGIGIRYEDEKQIVL-YD 239 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I + L I+ EPGRF+ G+ +T+V+ K++ K FVI+D AMND +RP+ Sbjct: 240 YAQGILKSLSGLDVTIVCEPGRFIAGAAGVFLTRVLYEKQNCGKRFVIVDGAMNDLIRPS 299 Query: 316 LYDAYHEINYIVNPAGDRLHIH-----------------------------------ADI 340 LY A+H I I G L+ D+ Sbjct: 300 LYGAHHAIEIIGASEGINLNEPDASEVNLGSRGEDQTSGSDADQKNLGGVNLAETSLCDV 359 Query: 341 VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHI 400 VGPICE+GDF+A + + GDLL I+ GAYG S YN+R E+ V Q + Sbjct: 360 VGPICESGDFLAKGVSLPSLQSGDLLAIKSAGAYGFSMSSNYNTRCRAAEVAVYDGQDRL 419 Query: 401 IRPRMTFQELIELDS 415 IR R +F ELI L+ Sbjct: 420 IRKRESFDELIALEK 434 >gi|282900558|ref|ZP_06308500.1| Diaminopimelate decarboxylase [Cylindrospermopsis raciborskii CS-505] gi|281194358|gb|EFA69313.1| Diaminopimelate decarboxylase [Cylindrospermopsis raciborskii CS-505] Length = 466 Score = 274 bits (699), Expect = 3e-71, Method: Composition-based stats. Identities = 108/423 (25%), Positives = 184/423 (43%), Gaps = 13/423 (3%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQAV 67 L ++ L +P Y + + +AF+ + + YA KA + AV Sbjct: 45 LEIGGCDVKTLVQQFGSPLYILDELTVRTACQQYRDAFNKYYKGQSQILYASKAWNCLAV 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 +A G G+D+VS GEL AL A + ++I G K+ E+ A+++G Sbjct: 105 CAIVASEGLGIDVVSGGELYTALTAGMSPDKIYLHGNNKSHHELIFAVETGCTIVVDNWY 164 Query: 128 SELKTLNQ-RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 + KK I R+ P I +TH+ I TG + KFG + + ++++ S Sbjct: 165 ELKTLVAILEQEDQAKKIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLPEVFSFVS 224 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + G+ HIGSQI + + ++ + + + ++VGGGLGI Y Sbjct: 225 QQSRLHCVGLHAHIGSQIFERQPHRDLAAVMVQWLHEAKQYNLELAELNVGGGLGIKYTE 284 Query: 247 DHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADK 299 PPS +++ I + ++ K++ EPGR L+A G+ + S K D Sbjct: 285 SDDPPSIEEWSRAICEVVQSVCAEENLPLPKLLCEPGRSLIATGGVTAYTIGSTKTIPDI 344 Query: 300 TFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 +D M+D RP Y + + N L + G CE+GD + N ++ Sbjct: 345 RTYVTIDGGMSDNPRPITYQSVYRAVV-ANKMSAPLTETVTLAGKHCESGDILIKNVQLP 403 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 PGD+L + TGAY + YN ++V + ++I R T+Q++I D +P Sbjct: 404 KTEPGDVLVVMTTGAYNYSMASNYNRLPRPAAVLVANGEANLILQRETYQDIIRQDCLPE 463 Query: 419 WLQ 421 L+ Sbjct: 464 RLK 466 >gi|108757300|ref|YP_634066.1| diaminopimelate decarboxylase [Myxococcus xanthus DK 1622] gi|108461180|gb|ABF86365.1| diaminopimelate decarboxylase [Myxococcus xanthus DK 1622] Length = 413 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 172/415 (41%), Positives = 250/415 (60%), Gaps = 3/415 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y +G LHAE+V L +A V TP Y YST + ++ + AF ++CY++K Sbjct: 1 MNHFAYHKGVLHAEDVPLAAIAESVGTPTYVYSTATLTRHIRVVTEAFGDRPHLICYSVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN A+++ +A G G DIVS GEL R A + VF+GVGKT +E++ AL +GI Sbjct: 61 ANSNLAILRLIAERGGGFDIVSGGELARVRHVGGDAGKTVFAGVGKTQEEMEAALAAGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL+ L+ LG++AP A RVNPD++A TH+ ISTG K KFG+P + + Sbjct: 121 LFNVESAEELEALDAVGRRLGRRAPFALRVNPDVDARTHRYISTGLKTSKFGVPFEEAVA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA A + G+ +G+D HIGSQ+ Q A + L L+ GH + ++DVGGGL Sbjct: 181 LYARAKKMKGLLAAGLDCHIGSQLTQTAPIRAALSKVAGLYSALKEKGHPLAYLDVGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + PPS +YA + G +ILEPGR LV + G+L+T+V+ KK+ + Sbjct: 241 GITYLDE-TPPSPEEYARTVLAAAGATGATLILEPGRALVGNAGVLLTRVLYRKKTPARH 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV++D MND +RP LY+A+H + +V G + D+VGP+CE+ D +A R + LP Sbjct: 300 FVVVDAGMNDLLRPALYEAHHGLQPLVKRRGKA--VEVDVVGPVCESTDVLAKARPLVLP 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + G+L GAYG S TYNSR E++V+G+ + ++R R ++L + Sbjct: 358 QAGELFAFMSAGAYGMSMSSTYNSRPRPAEVLVDGAAWRVVRERERVEDLWRGER 412 >gi|315636623|ref|ZP_07891857.1| diaminopimelate decarboxylase [Arcobacter butzleri JV22] gi|315479132|gb|EFU69831.1| diaminopimelate decarboxylase [Arcobacter butzleri JV22] Length = 407 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 163/399 (40%), Positives = 236/399 (59%), Gaps = 4/399 (1%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 ++ ++LA+ QTP+Y Y I Y +AF +++ YA+KANSN +VIK LA+LG Sbjct: 8 INFKELANKYQTPYYVYDFNYITNQYEELKSAFRARKSLIAYAVKANSNLSVIKHLANLG 67 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G D VS GE++RAL +P+ +I+FSGVGK DEI AL+ I NVES +EL + Sbjct: 68 AGADCVSIGEVKRALKVGIPSYKIIFSGVGKIDDEIRQALELDILMINVESSAELDRVEI 127 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L K A I+ RVNP+I+ TH ISTG E+KFG+ I +Y + G Sbjct: 128 IAKELNKIARISIRVNPNIDPKTHPYISTGLHENKFGVDIDSAKRMYIQCKNSENLDPVG 187 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIGSQ+ +++ +A K++ DL + L++ + ID+GGGLGI Y + + + Sbjct: 188 IHCHIGSQLTELQPIKEAVKIIADLVKNLKAIKIELSFIDIGGGLGIIYKDEKLI-DTYE 246 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I + L II EPGRF+V + GI VTKV+ K + +K FVI+D AMND +RP Sbjct: 247 YAQSILETMFGLDITIICEPGRFIVGNSGIFVTKVLYEKINGNKRFVIVDGAMNDLIRPA 306 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYH I + ++ ++VGP+CE+GDF A N ++ DL+ I GAYG Sbjct: 307 LYNAYHRIEVL---NDNQDFSDCNLVGPVCESGDFFAKNIQLPKTEHNDLVAIYSAGAYG 363 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + EI + + +IR R TF++LI L+ Sbjct: 364 FTMSSNYNTRGKVAEIAIEDGKDRLIRKRETFEDLIALE 402 >gi|87200688|ref|YP_497945.1| diaminopimelate decarboxylase [Novosphingobium aromaticivorans DSM 12444] gi|87136369|gb|ABD27111.1| diaminopimelate decarboxylase [Novosphingobium aromaticivorans DSM 12444] Length = 419 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 166/422 (39%), Positives = 256/422 (60%), Gaps = 4/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT-MVCYAL 59 M F+ G LHAE+V+L +A V TP Y YS + ++ F +A + + +A+ Sbjct: 1 MDHFEVSNGVLHAEDVALPVIAAEVGTPVYVYSRATLTRHARVFRDALSILPAVKIAFAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K+N N AV+K LA G G D+VS GE+ RALAA + + IVFSGVGKT E+ +++GI Sbjct: 61 KSNPNLAVLKVLAAEGYGADVVSGGEMERALAAGMKPDGIVFSGVGKTEAEMRRGIEAGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 FN+ESE E L + A S+GK A A RVNPD++A TH KISTGK E+KFG+P + Sbjct: 121 GQFNLESEEEGLELAEIAASMGKVASAALRVNPDVDAGTHGKISTGKAENKFGVPFDRAA 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++YA + PG+ + G+ +HIGSQ+ +++ AF + L + +R GH + H+D+GGG Sbjct: 181 AIYARLADTPGLNMRGLALHIGSQLSKLDPLEAAFTKVGGLMRAIREGGHAVTHMDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 +G+ Y + P ++YA+++ + + ++ EPGR + + G+L+T+V+ +K+ A Sbjct: 241 VGVPYKAGEVFPQPAEYAAMVAKVTADWGVTLMFEPGRVITGNTGVLMTQVVRVKEGAGH 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 +V++D AMND RP LYDA+H+ A+IVGPICE+ D A+ R I Sbjct: 301 PWVVVDAAMNDLARPALYDAWHDF---AAVEPTGETFVANIVGPICESSDTFAMARTIDK 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL GAYGA + TYNSR L+PE+MV+G ++ ++ R+ ++ + +P + Sbjct: 358 VGRGDLAVFRTAGAYGATMANTYNSRPLVPEVMVDGEKWAVVADRIDPATILAAERVPDF 417 Query: 420 LQ 421 L+ Sbjct: 418 LK 419 >gi|289432423|ref|YP_003462296.1| diaminopimelate decarboxylase [Dehalococcoides sp. GT] gi|288946143|gb|ADC73840.1| diaminopimelate decarboxylase [Dehalococcoides sp. GT] Length = 434 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 129/423 (30%), Positives = 193/423 (45%), Gaps = 12/423 (2%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKAN 62 + L V + L TP Y + I +N F F D+ V YA KA Sbjct: 13 EVKNNHLIIGGVDVAGLCAKYGTPLYIFDELTIRQNCRDFKREFSRRYADSSVSYASKAF 72 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + A++K LA G LD+VS GEL A A P + + G K+ +E+ LAL+ + Sbjct: 73 LHPALLKILAEEGMSLDVVSGGELSVANNAGFPMDMVYLHGNNKSAEELRLALRLHVGRI 132 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V+S E+K L++ A G I R+ P ++A+TH+ I+TGK + KFG P+ Q Sbjct: 133 VVDSFDEIKLLSKLADESGHIPDILLRITPGVDAHTHQHITTGKLDSKFGFPLFQAAEAV 192 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLG 241 A + + G HIGSQI + + F A L+ D Q G +I+ +D+GGG G Sbjct: 193 GLAMAQASLNLVGFHFHIGSQIFETQPFLDAIDLVLDFAAQVQERYGFDIEELDIGGGYG 252 Query: 242 IAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y D P S YA + + +EPGR ++A G+ + V IK Sbjct: 253 VQYEVDKLAPPISAYAEAIGAKVVSKCRSLKLTPPSLNIEPGRAIIAQAGVALYTVGVIK 312 Query: 295 KSADKT-FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + +D M D +RP LY+A +E N I G CE+GD + Sbjct: 313 DIPGIRLYASVDGGMGDNIRPALYEAKYEAVV-ANNVQSAEKEKVTIAGKFCESGDILIR 371 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + ++ R GD+L + GAY S YN +M+ + +IR R T ++L L Sbjct: 372 DIELPSLRTGDILAVPCCGAYCLPMSSNYNGYHRPAVVMLKNGEDRLIRRRETVEDLSRL 431 Query: 414 DSI 416 DS+ Sbjct: 432 DSV 434 >gi|157738336|ref|YP_001491020.1| diaminopimelate decarboxylase [Arcobacter butzleri RM4018] gi|157700190|gb|ABV68350.1| diaminopimelate decarboxylase [Arcobacter butzleri RM4018] Length = 402 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 163/399 (40%), Positives = 239/399 (59%), Gaps = 4/399 (1%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 ++ ++LA+ QTP+Y Y I Y +AF +++ YA+KANSN +VIK LA+LG Sbjct: 3 INFKELANKYQTPYYVYDFNYITNQYEELKSAFRARKSLIAYAVKANSNLSVIKHLANLG 62 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G D VS GE++RAL +P+ +I+FSGVGK DEI AL+ I NVES++EL+ + Sbjct: 63 AGADCVSIGEVKRALKVGIPSYKIIFSGVGKIDDEIRQALELDILMINVESDAELQRVEI 122 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A LGK A I+ RVNP+I+ TH ISTG E+KFG+ I +Y + G Sbjct: 123 IAKELGKVARISIRVNPNIDPKTHPYISTGLHENKFGVDIDTAKRMYIQCKNSDFLDPVG 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIGSQ+ +++ +A K++ DL + L++ + ID+GGGLGI Y + + + Sbjct: 183 IHCHIGSQLTELQPIKEAVKIVADLVRNLKAIKIELSFIDIGGGLGIIYKDEKLI-DTYE 241 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I + L II EPGRF++ + GI VTKV+ K + +K FVI+D AMND +RP Sbjct: 242 YAQSILETMFGLDITIICEPGRFIIGNSGIFVTKVLYEKINGNKRFVIVDGAMNDLIRPA 301 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYH I + ++ ++VGP+CE+GDF A N ++ DL+ I GAYG Sbjct: 302 LYNAYHRIEVL---NDNQDFSDCNLVGPVCESGDFFAKNIQLPKTEHNDLVAIYSAGAYG 358 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + EI + + +IR R TF++LI L+ Sbjct: 359 FTMSSNYNTRGKVAEIAIEDGKDRLIRKRETFEDLIALE 397 >gi|254827163|ref|ZP_05231850.1| lysA [Listeria monocytogenes FSL N3-165] gi|254831447|ref|ZP_05236102.1| hypothetical protein Lmon1_08838 [Listeria monocytogenes 10403S] gi|254899351|ref|ZP_05259275.1| hypothetical protein LmonJ_06044 [Listeria monocytogenes J0161] gi|254912510|ref|ZP_05262522.1| diaminopimelate decarboxylase [Listeria monocytogenes J2818] gi|254936837|ref|ZP_05268534.1| lysA [Listeria monocytogenes F6900] gi|255026088|ref|ZP_05298074.1| hypothetical protein LmonocytFSL_06525 [Listeria monocytogenes FSL J2-003] gi|284802397|ref|YP_003414262.1| diaminopimelate decarboxylase [Listeria monocytogenes 08-5578] gi|284995539|ref|YP_003417307.1| diaminopimelate decarboxylase [Listeria monocytogenes 08-5923] gi|258599545|gb|EEW12870.1| lysA [Listeria monocytogenes FSL N3-165] gi|258609433|gb|EEW22041.1| lysA [Listeria monocytogenes F6900] gi|284057959|gb|ADB68900.1| diaminopimelate decarboxylase [Listeria monocytogenes 08-5578] gi|284061006|gb|ADB71945.1| diaminopimelate decarboxylase [Listeria monocytogenes 08-5923] gi|293590495|gb|EFF98829.1| diaminopimelate decarboxylase [Listeria monocytogenes J2818] Length = 436 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 131/421 (31%), Positives = 196/421 (46%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KLA TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLADKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+ +EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 134 NYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 193 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + G + + +++GGG G Sbjct: 194 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P S+Y I +I +EPGR LV + G + KV S K Sbjct: 254 VRYTAEDEPLEPSEYVRQIMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRK 313 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + ++ +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 314 EVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIW 372 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN P + V +I R T++ L++ Sbjct: 373 DLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQN 432 Query: 414 D 414 D Sbjct: 433 D 433 >gi|47097095|ref|ZP_00234665.1| diaminopimelate decarboxylase [Listeria monocytogenes str. 1/2a F6854] gi|47014540|gb|EAL05503.1| diaminopimelate decarboxylase [Listeria monocytogenes str. 1/2a F6854] Length = 428 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 131/421 (31%), Positives = 196/421 (46%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KLA TP Y Y I F F+ G+ V YA KA S Sbjct: 6 EGHLEIGGVDTLKLADKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 65 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+ +EI +AL GI CF ++ Sbjct: 66 AIYQLMAEEGLSLDVVSGGELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID 125 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 126 NYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 185 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + G + + +++GGG G Sbjct: 186 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFG 245 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P S+Y I +I +EPGR LV + G + KV S K Sbjct: 246 VRYTAEDEPLEPSEYVRQIMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRK 305 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + ++ +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 306 EVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIW 364 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN P + V +I R T++ L++ Sbjct: 365 DLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQN 424 Query: 414 D 414 D Sbjct: 425 D 425 >gi|110597928|ref|ZP_01386210.1| diaminopimelate decarboxylase [Chlorobium ferrooxidans DSM 13031] gi|110340505|gb|EAT58991.1| diaminopimelate decarboxylase [Chlorobium ferrooxidans DSM 13031] Length = 409 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 151/412 (36%), Positives = 234/412 (56%), Gaps = 4/412 (0%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 Y +L + +SLEKLA TP + S ++ ++ F +AF + CY++KAN N Sbjct: 1 YNGRTLSCDGISLEKLADTFGTPLFVTSAKSLAGSHRAFEHAFADLPHFTCYSVKANYNL 60 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +VI+T A LG G D+ S GEL RAL A V AE+I+F+GVGK +EI AL+SG+ E Sbjct: 61 SVIRTFAELGCGCDVNSGGELFRALTAGVAAEKIIFAGVGKKPEEIAYALKSGVLMLKAE 120 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 S SEL+ +N+ A L A +A R+NP++ A TH I+TG ++KFGI ++ +++A Sbjct: 121 SLSELRAINRIAGELELIANVAIRINPNVTAETHPYITTGDSKEKFGIDEAELPAVFALL 180 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 L + + G+DMHIGSQI E + A L D+ + G ++ +D+GGG + Y Sbjct: 181 PQLRNLCLLGLDMHIGSQIFDPEYYVAATTKLLDIFSASKEMGFGVEFLDIGGGFPVTYD 240 Query: 246 SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS-IKKSADKTFVIL 304 + +A + +I EPGR VA+ +L+T+++ + K F ++ Sbjct: 241 PLKPATPIAHFAEKLIPMLKPAGVTVIFEPGRSFVANASVLLTRILYKKRNHTGKEFFVV 300 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D M + +RP LY A+HEI + + + AD+VGP+CE+ DF A +R+I G+ Sbjct: 301 DAGMTELIRPALYQAHHEILAVTSHEQS---VVADVVGPVCESSDFFARHREIDAAEEGE 357 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 LL + GAY AV YN RL E++VNGS +IR R ++++LI+ + + Sbjct: 358 LLAVMSAGAYAAVMGSNYNGRLRPAEVLVNGSDVKLIRKRESYEQLIQNELL 409 >gi|302392438|ref|YP_003828258.1| diaminopimelate decarboxylase [Acetohalobium arabaticum DSM 5501] gi|302204515|gb|ADL13193.1| diaminopimelate decarboxylase [Acetohalobium arabaticum DSM 5501] Length = 437 Score = 273 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 132/428 (30%), Positives = 205/428 (47%), Gaps = 14/428 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSN 64 +G+L + +A TP Y + N + AF+ ++ YA KA + Sbjct: 11 EKGNLEVGGCDVTNIATEYGTPLYILDEEELRDNCRAYRQAFEEWYPNSETIYASKAFMS 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + K + G GLD+VS GEL AL A P ++I F G KT +E+++ L I V Sbjct: 71 LTICKIVEEEGLGLDVVSGGELYTALEADFPTDKIYFHGNNKTPEELEMVLNEEIGRIVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLY 182 ++ EL+ LN+ A GK+A I RV P + A+TH I TG+ + KFG+ I Sbjct: 131 DNNYELELLNELADQQGKRADILIRVTPGVEAHTHSYIQTGQTDSKFGVGIQNGLALETV 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLG 241 A L + + G+ HIGSQI +ESF A ++ D ++++ ++ +++GGG+G Sbjct: 191 KKAVELENIDVKGIHCHIGSQIFNLESFEVAVDVMLDFVEEVKIETGLVMEELNIGGGIG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK 294 I Y + S YA L+ + KII EPGR ++ G + V SIK Sbjct: 251 IKYTDKDQSVSIDQYAELVAKAIKQKCEEINIPLPKIINEPGRSIIGTAGSTIYTVGSIK 310 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 D + +D M D +RP LY+A +E N A + I G CE+GD + Sbjct: 311 NIPDVRKYVAVDGGMPDNIRPALYEAEYEAIV-ANKANRKPEEVVSITGKCCESGDMLIW 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + ++ PGD+L TGAYG + YNS +++N Q I +++L+ Sbjct: 370 DIELPEMEPGDVLLTPCTGAYGYAMANNYNSLPKPGVVLINNGQVEEIIRGERYEDLVAK 429 Query: 414 DSIPAWLQ 421 + IPA L+ Sbjct: 430 EEIPARLK 437 >gi|103485699|ref|YP_615260.1| diaminopimelate decarboxylase [Sphingopyxis alaskensis RB2256] gi|98975776|gb|ABF51927.1| diaminopimelate decarboxylase [Sphingopyxis alaskensis RB2256] Length = 419 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 171/421 (40%), Positives = 256/421 (60%), Gaps = 4/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM-VCYAL 59 M F+Y +G LHAE++ L ++A + TP Y YS +E++ F++A + + +A+ Sbjct: 1 MDHFEYRDGVLHAEDIPLPRIAKEIGTPVYVYSRATLERHAQVFADALRDIPRKHIAFAI 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K N N V++ LA G G D+VS GEL RALAA + AE IVFSGVGKT E+ L GI Sbjct: 61 KCNPNLGVLRVLARQGYGADVVSGGELERALAAGMAAEDIVFSGVGKTRAELAQGLDRGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 FN+E E E L++ AV+ A RVNPD++A TH KISTGK E+KFG+ I Sbjct: 121 GQFNIEHEPEGVALSEIAVAKEMTARAVLRVNPDVDAGTHAKISTGKAENKFGVGIDSAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +++ S LPG+K+ GV +HIGSQ+ ++ AF+ + L LR+ GH+I H+D+GGG Sbjct: 181 AIFDRLSALPGLKMRGVALHIGSQLTSLDPLEAAFERVGRLVADLRAAGHSITHVDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + PP+ ++Y +++ + + ++ EPGR + + G+L+T+V+ +K A Sbjct: 241 LGVPYRPEDNPPTPAEYGAMVARVTKDWDVTLMFEPGRVIAGNTGVLLTEVLWVKPGATH 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND RP LYDA+H+ + A IVGP+CETGD A +R+I Sbjct: 301 PFVIVDAAMNDLARPALYDAWHDFV---AVKPTGEKMIASIVGPVCETGDTFARDREIDA 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 +PG L GAYGA + TYNSR L+PE++V+G ++ + R+ ++ + +P W Sbjct: 358 VQPGALAVFRTAGAYGATMASTYNSRSLVPEVLVDGDRYITVADRIAAGTIMAAERVPDW 417 Query: 420 L 420 + Sbjct: 418 I 418 >gi|300869785|ref|YP_003784656.1| diaminopimelate decarboxylase [Brachyspira pilosicoli 95/1000] gi|300687484|gb|ADK30155.1| diaminopimelate decarboxylase [Brachyspira pilosicoli 95/1000] Length = 412 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 147/412 (35%), Positives = 234/412 (56%), Gaps = 4/412 (0%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSN 64 Y + L E++ + + V +TPFY YS I + N F + + + YA+KA +N Sbjct: 4 YKDNILMCEDIEIRNITDVYKTPFYIYSKNDILQKIRFLKNVFSDIENHSIVYAIKAENN 63 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +++K + G G D+VS GE + + A AE IVFSGV KT +EI +++ I FN+ Sbjct: 64 LSILKMMIEEGIGGDVVSIGETLKYIKAGGKAENIVFSGVAKTEEEIRKSIELNIKRFNI 123 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ES E +N A L ++ + RVNP+I+A+TH+KI+TG +KFGI I I Sbjct: 124 ESIPEAIRINSIAKELKRRVKCSIRVNPNIDAHTHEKITTGINGNKFGISIKTIRENANM 183 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 +L ++I + MHIGSQ+ E F+KA ++RDL ++ S G NI +ID+GGG G+ Y Sbjct: 184 LKSLDNIEIDSLSMHIGSQMVDAEPFYKAILVMRDLIAEVNSLGFNITNIDIGGGFGVRY 243 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + H + +++ + EPGR+ VA+ G L+ +V IK+ + + IL Sbjct: 244 NRAHSGFDFDKFKKDSISLLKDMKLSVTTEPGRYFVAESGALIMRVEYIKEELSRKYAIL 303 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D MND++R +Y+AY+EI +V + + D VGPICE+ D A +R+ + GD Sbjct: 304 DGGMNDYVRVAMYEAYNEIMPLVKTD---KYSNYDFVGPICESSDVFANDRECETLKEGD 360 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + + GAYG + YNSR LI ++M++ + +IIR R +F+++I+ + I Sbjct: 361 YVALLDAGAYGFSMASNYNSRPLISQVMIDKDKHYIIRKRQSFEDMIKDEII 412 >gi|149185865|ref|ZP_01864180.1| diaminopimelate decarboxylase [Erythrobacter sp. SD-21] gi|148830426|gb|EDL48862.1| diaminopimelate decarboxylase [Erythrobacter sp. SD-21] Length = 420 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 164/421 (38%), Positives = 257/421 (61%), Gaps = 4/421 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYAL 59 M F++ +G L AE+V L +A V TP Y YS + ++ F +A + + +A+ Sbjct: 1 MDHFQHRDGILFAEDVPLPLIAEEVGTPVYVYSRATLVRHARVFRDALSELKQPHIAFAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN N AV++ LA+ G G D+VS GEL RAL A + E IVFSGVGKT E+ L+ GI Sbjct: 61 KANPNLAVLRLLANEGYGADVVSGGELTRALKAGMKPEDIVFSGVGKTHAELQQGLEEGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 FN+ESE E L A GK+A A RVNPD++A TH+KISTGK+E+KFG+P+ + Sbjct: 121 GQFNIESEEEGYELAAIARRFGKRAACALRVNPDVDARTHEKISTGKRENKFGVPLDRAA 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++Y + G+ + G+ +HIGSQ+ +E AF + L ++LR+ G ++ H D+GGG Sbjct: 181 AIYTALAKEEGLDMRGIAVHIGSQLADLEPLEAAFGKVGALIKELRAGGCSVTHADLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + P+ ++Y +++ + + +++ EPGR + + G+L+T+VI +K+ ++ Sbjct: 241 LGVPYKAGEELPAPAEYGAMVTRLTRDWNVQLMFEPGRVIAGNAGVLLTRVIRVKRGIER 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F+++D AMND RP +Y A+H+ A IVGPICETGD A++RKI + Sbjct: 301 PFLVVDAAMNDLARPAMYGAWHDFE---AVEPTGEKTIAHIVGPICETGDTFAMDRKIDV 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGDL GAYGA + +YNSR + E++V+G ++ ++ R+ +++ + +P W Sbjct: 358 LAPGDLAVFRTAGAYGATMASSYNSRGFVAEVLVDGDRYAVVADRIAAGAIMDAERVPDW 417 Query: 420 L 420 L Sbjct: 418 L 418 >gi|282896303|ref|ZP_06304325.1| Diaminopimelate decarboxylase [Raphidiopsis brookii D9] gi|281198799|gb|EFA73678.1| Diaminopimelate decarboxylase [Raphidiopsis brookii D9] Length = 464 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 112/425 (26%), Positives = 185/425 (43%), Gaps = 15/425 (3%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQAV 67 L ++ L +P Y + + +AF + V YA KA + AV Sbjct: 41 LEIGGCDVKTLVQQFGSPLYILDELTVRTACQQYRDAFTKYYKGHSQVLYASKAWNCLAV 100 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 +A G G+D+VS GEL AL A + ++I G K+ E+ A+++G Sbjct: 101 CAIVASEGLGIDVVSGGELYTALTAGMSPDKIYLHGNNKSHHELMFAVETGCTIVVDNWY 160 Query: 128 SELKTL---NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 + Q KK I R+ P I +TH+ I TG + KFG + + ++++ Sbjct: 161 ELRTLVAILEQDEQDQAKKIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLPEVFSF 220 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 S + GV HIGSQI + + ++ ++ + + ++VGGGLGI Y Sbjct: 221 VSQQSRLHCVGVHAHIGSQIFERQPHRDLAAVMVQWLREAKQYNLELAELNVGGGLGIKY 280 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 PPS +++ I + N+ K++ EPGR L+A G+ + S K Sbjct: 281 TESDDPPSIEEWSRAICEVVQNVCAEENLPLPKLLCEPGRSLIATGGVTAYTIGSTKTIP 340 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 D +D M+D RP Y + + N L + G CE+GD + N + Sbjct: 341 DIRTYVTIDGGMSDNPRPITYQSVYRAVV-ANKMSAPLTETVTLAGKHCESGDILIKNVQ 399 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + PGD+L + TGAY + YN ++V + ++I R T+Q++I D + Sbjct: 400 LPKTEPGDVLVVMTTGAYNYSMASNYNRLPRPAAVLVANGEANLILQRETYQDIIRQDCL 459 Query: 417 PAWLQ 421 P L+ Sbjct: 460 PGRLK 464 >gi|310780443|ref|YP_003968775.1| diaminopimelate decarboxylase [Ilyobacter polytropus DSM 2926] gi|309749766|gb|ADO84427.1| diaminopimelate decarboxylase [Ilyobacter polytropus DSM 2926] Length = 433 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 115/425 (27%), Positives = 185/425 (43%), Gaps = 14/425 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALK 60 + + + L+ +S ++L +P Y I KN TF AF T V YA K Sbjct: 6 SMEIKDNQLYIGGISSKELVEKHGSPLYVMDEALISKNMETFKAAFKSDRFQTEVVYASK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A + + + G +D+VS GEL +A P E++ G KT +E+++ L GI Sbjct: 66 AFLTTGMCQIVDRHGLSMDVVSGGELFTVKSAGFPMEKVHMHGNNKTWEELEMCLDYGIG 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH- 179 V++ EL L + GKK + RVNP I A+TH+ I T KFG I + Sbjct: 126 EIIVDNRDELDKLERVCREKGKKINVLLRVNPGIEAHTHEYIQTSTYSSKFGESIFDENI 185 Query: 180 -SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVG 237 + V++ G HIGSQI + F A + +Q++ + +++G Sbjct: 186 KDIIKKFIAAEHVELKGFHCHIGSQIFDEKPFFAAMDTMLKFIKQMKDEAGLDTTVLNLG 245 Query: 238 GGLGIAYHSDHRPPSSSDYASLIH-------QYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG G+ Y + + + K+I+EPGR +VA+ G + V Sbjct: 246 GGFGVYYFDGDDAVDFEKFCKEMIKDLESKLDEYEIDLDKVIIEPGRSIVANAGTTLYTV 305 Query: 291 ISIK-KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K + K +V +D M D +RP LY A +E N ++ + G CE+GD Sbjct: 306 GGTKVTYSGKKYVFVDGGMTDNIRPALYQAEYEGVI-ANRINEKTEDLVTVAGKCCESGD 364 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + + + GD+L I TGAY + YN + V + + R ++++ Sbjct: 365 LLLRDVYLQEAKEGDILAISTTGAYNYSMASNYNRIRKPAVVFVKDGESKVAVKRESYED 424 Query: 410 LIELD 414 LI D Sbjct: 425 LIRND 429 >gi|16803991|ref|NP_465476.1| hypothetical protein lmo1952 [Listeria monocytogenes EGD-e] gi|224498598|ref|ZP_03666947.1| hypothetical protein LmonF1_02429 [Listeria monocytogenes Finland 1988] gi|224501248|ref|ZP_03669555.1| hypothetical protein LmonFR_01785 [Listeria monocytogenes FSL R2-561] gi|16411405|emb|CAD00030.1| lysA [Listeria monocytogenes EGD-e] Length = 436 Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats. Identities = 131/421 (31%), Positives = 196/421 (46%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KLA TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLADKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+ +EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELFTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 134 NYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 193 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + G + + +++GGG G Sbjct: 194 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P S+Y I +I +EPGR LV + G + KV S K Sbjct: 254 VRYTAEDEPLEPSEYVRQIMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRK 313 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + ++ +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 314 EVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIW 372 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN P + V +I R T++ L++ Sbjct: 373 DLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQN 432 Query: 414 D 414 D Sbjct: 433 D 433 >gi|291542677|emb|CBL15787.1| diaminopimelate decarboxylase [Ruminococcus bromii L2-63] Length = 432 Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats. Identities = 123/423 (29%), Positives = 196/423 (46%), Gaps = 15/423 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANS 63 +G L +LA TP Y T I + +F+ + M YA KA S Sbjct: 11 NKGHLTIGGCDTLELAKEFGTPLYVLDETTIRNVCKAYVKSFEKYYHGNGMPLYASKALS 70 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 + + + G GLD+VS GE+ A+ A P E++ F G KT DEI AL+S + F Sbjct: 71 CKELCRIAKEEGLGLDVVSGGEIYTAVQAGFPMEKVHFHGNNKTADEIRFALESNVGKFV 130 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY- 182 V++ EL+ LN+ +GKKA I+FR+ P ++A+TH I TG+ + KFG + + Sbjct: 131 VDNLYELELLNEICGEMGKKANISFRIKPGVDAHTHNFIRTGQIDSKFGFALETGEAFEA 190 Query: 183 -AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGL 240 A V ++ + HIGSQI I+ F A +++ D + G I +++GGG Sbjct: 191 VKKAQMYDNVNLTELHCHIGSQIFDIDPFVTAAEIMLDFMGKIHDELGIVISELNLGGGF 250 Query: 241 GIAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 GI Y D P +Y + G I +EPGR +V + GI + KV Sbjct: 251 GIMYTKDDEPVPYENYMEKVSEAVKAKAKEHGLPVPYIFIEPGRSIVGEAGITLYKVGGK 310 Query: 294 KKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K+ + +D M D +R LY + + + + I + G CE+GD + Sbjct: 311 KEIPNVRTYVSVDGGMTDNIRYALYQSAYTVVNAGKADKEPDEI-VTVAGKCCESGDLVQ 369 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 + K+A GD L + TGAY + YN +MV + ++ R +++++++ Sbjct: 370 EHTKVAKVEVGDTLAVLSTGAYNYSMASNYNRIPRPAIVMVKDGKARVVVKRESYEDIVK 429 Query: 413 LDS 415 D Sbjct: 430 NDI 432 >gi|325957878|ref|YP_004289344.1| diaminopimelate decarboxylase [Methanobacterium sp. AL-21] gi|325329310|gb|ADZ08372.1| diaminopimelate decarboxylase [Methanobacterium sp. AL-21] Length = 428 Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats. Identities = 143/435 (32%), Positives = 201/435 (46%), Gaps = 20/435 (4%) Query: 1 MSAFKYF---EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMV 55 M F +G+L LA TP Y I NY NAF + + Sbjct: 1 MD-FDLKTNEKGNLKIGEADAVDLAERFGTPLYVIDENRIRDNYKRLYNAFKDYYPNFKM 59 Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 YA KAN+N AV+K L + GSG+D VS GE+ +L A ERI+++G T +E+ A+ Sbjct: 60 FYACKANTNLAVMKILENEGSGIDAVSPGEIYTSLLAGFEPERILYTGNNVTDEELKFAV 119 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 +SG+ + + K I+FRVNP + A H TG KFGI Sbjct: 120 ESGVRLNLDSISQLKRL---SKIPEAKGMEISFRVNPMVGAGHHDHCITGGPLSKFGIKE 176 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHI 234 + +Y A L K G+ HIGS I E F A + L D + + G I Sbjct: 177 EEAVEVYKMAIELGF-KPVGIHSHIGSGILDPEPFMLAVRTLMDTAGKVHKEAGVEFDFI 235 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILV 287 D GGG+GI Y + +D+A I + + +EPGR+LV D +L+ Sbjct: 236 DFGGGIGIPYTPEESKLDINDFAEKIVDLYKAKLEEYDLGTPTMCIEPGRYLVGDASVLL 295 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 TKV +IK+S + F +D N +RPT+Y +YH I P + DI G +CE+ Sbjct: 296 TKVNTIKQS-YRKFAGVDAGFNTLLRPTMYGSYHHIVSASTPLAES-TQTIDIAGDVCES 353 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 GD A R + GD+L I GAY + YNSR E++VN + +IR R TF Sbjct: 354 GDLFARERPMPEIEEGDILAILNAGAYAFSMASQYNSRPKPAEVLVNNGETDVIRERETF 413 Query: 408 QELIELDSIPAWLQK 422 +L ++P L K Sbjct: 414 ADLFNKQNVPVRLLK 428 >gi|91762456|ref|ZP_01264421.1| Diaminopimelate decarboxylase [Candidatus Pelagibacter ubique HTCC1002] gi|91718258|gb|EAS84908.1| Diaminopimelate decarboxylase [Candidatus Pelagibacter ubique HTCC1002] Length = 404 Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats. Identities = 148/408 (36%), Positives = 230/408 (56%), Gaps = 4/408 (0%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 KY +L E V+++K+A TP YCYS + +N F F ++C+A+K+N+ Sbjct: 1 MKYINKNLTIEKVNVQKIAKKFGTPTYCYSHKRLTENIKKFKKNFSSFSPLICFAVKSNT 60 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N +I+ + LG G D+VS GEL A+ A + ++IVFSGVGKT EI A+ I N Sbjct: 61 NVNLIREIRKLGLGADVVSMGELMMAIKAGIDPKKIVFSGVGKTSKEISYAIDKKILLIN 120 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 ES+SE+ + + A S K I R+NP+ +A T K+ISTGKKE+KFG+ L Sbjct: 121 AESKSEIIEIEKIAKSKKKIVNIGIRLNPNTDAKTLKQISTGKKENKFGVDEKTFFELVN 180 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + + + + + +HIGSQI + + K+L + + ++ +GH + ID+GGG+GI+ Sbjct: 181 FTNHSKNINLKCLSVHIGSQILDHKPYE---KMLNVVNKIIKKSGHIFEFIDLGGGMGIS 237 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 Y + + + Y I ++ + KII EPGR +V ++G L+++VI IK++ K F+I Sbjct: 238 YEKNSKKLNYQKYNIAIQKFLKGQKTKIIFEPGRSIVGNIGFLISQVIYIKENTKKDFII 297 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 LD AMND MRP LY A H+ +V + + VGPICE+ D + + Sbjct: 298 LDAAMNDLMRPALYGANHQTIPVVK-NNRISNKTYEFVGPICESTDKFTTIKGFQKLKEK 356 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 DL+ + GAYG S YN R E+++ GS+ +II+ R ++LI Sbjct: 357 DLVIMCDVGAYGMSLSSNYNVRPKPAELIIKGSKINIIKKRQKLKDLI 404 >gi|189485646|ref|YP_001956587.1| diaminopimelate decarboxylase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287605|dbj|BAG14126.1| diaminopimelate decarboxylase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 410 Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats. Identities = 163/415 (39%), Positives = 238/415 (57%), Gaps = 5/415 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+ L+ E V L +A +T Y YS + I N+ + A + ++C+A K Sbjct: 1 MPQFE--GNDLYIEQVKLSDIAKKYKTSTYVYSKSKIVTNFENYKKALGSREGLICFACK 58 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 NSN ++K LA LG+G D S GE+ R L A +IV++GVGKT +EI+ AL+S I+ Sbjct: 59 TNSNGTILKLLAKLGAGADTTSGGEIYRCLKADFDPSKIVYAGVGKTAEEIEYALKSRIF 118 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FNVES EL +++ A + KA IAFR+NP ++ +TH I TGKK KFGIP + Sbjct: 119 MFNVESFEELDAIDKIAAKIKIKAKIAFRINPHVDPDTHSYIITGKKGTKFGIPYEEAVK 178 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A ++I G+ HIGSQI I+SF A + ++ + + NG +++++ GGGL Sbjct: 179 AYLAAKQKKNIEILGIHSHIGSQILDIDSFRLAAQKIKKIVNIVEKNGIKLEYVNFGGGL 238 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y D + PS S + + K I EPGR ++A+ G L+ KVI K S K+ Sbjct: 239 GVEYKKDQKAPSPKQLISELFPV-FDENKKFIFEPGRSIIANAGHLLVKVIYRKISGGKS 297 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I D MND +RPTLY+AYHEI + + + D+VGPICE+GDF+ +R + Sbjct: 298 FLITDAGMNDLIRPTLYEAYHEILPVK--MTNDKKVKTDVVGPICESGDFMGKDRMLPFV 355 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 G L I GAYG S YNSR L+ E++VNG + +IR R +++L+ + Sbjct: 356 EQGGYLLITCAGAYGFAMSSEYNSRPLLAEVLVNGDKTMLIRKRAKYEDLLLNEV 410 >gi|237751705|ref|ZP_04582185.1| diaminopimelate decarboxylase [Helicobacter bilis ATCC 43879] gi|229373071|gb|EEO23462.1| diaminopimelate decarboxylase [Helicobacter bilis ATCC 43879] Length = 448 Score = 272 bits (696), Expect = 7e-71, Method: Composition-based stats. Identities = 169/458 (36%), Positives = 243/458 (53%), Gaps = 44/458 (9%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M FK EKLA TP Y Y ++++ YL ++F G ++VCYALK Sbjct: 1 MKHFKAK--------CDYEKLAKEYGTPLYIYDIESLQQQYLKIKDSFGGFKSLVCYALK 52 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN +++ TLA LGSG D VS E++RA+ A +P +I+FSGVGK EI+ A++ GI Sbjct: 53 ANSNLSILNTLAKLGSGADCVSLNEVKRAILAGIPPYKIIFSGVGKEDYEIEEAIKLGIL 112 Query: 121 CFNVESESELKTLNQRAVS-----------------------------LGKKAPIAFRVN 151 NVES+ EL + + + I+ RVN Sbjct: 113 FINVESKMELYRIEAITKRLYGDSIAKKSSHTTETSQADSLPLTTPESMQYQTRISIRVN 172 Query: 152 PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFH 211 PD++A TH ISTG E+KFG+ I LY YA + G+ HIGSQI Sbjct: 173 PDVDAKTHPYISTGLHENKFGLDIESAKELYIYAHKSEFLNPIGIHYHIGSQILDKAPLL 232 Query: 212 KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI 271 ++ + + DL + L++ ++ D+GGG GI+Y+ + DY I + L Sbjct: 233 ESTQKILDLAKSLKALQIPLKFFDIGGGFGISYN-NEESFVIQDYIHEIIRKIDALDFTA 291 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 I EPGRF++ + G L+T+VI K++A+K FVI+D AMND +RP+LY AYH I++I Sbjct: 292 ICEPGRFIMGNSGALLTRVIGEKQTANKRFVIVDCAMNDLLRPSLYHAYHHISHITQKET 351 Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 D I D+VG ICE+GD++ + K+ GDLL IE GAYG S YNSR+ EI Sbjct: 352 DSTQI-CDVVGAICESGDYVGKDIKLPHCESGDLLLIESAGAYGYSMSSNYNSRMRPAEI 410 Query: 392 MVNGSQFHIIRPRMTFQ-----ELIELDSIPAWLQKTP 424 + + ++I+ R F EL L+ +P++ KT Sbjct: 411 AIYNGESYLIKERENFDLSVQNELSCLEKLPSFDSKTN 448 >gi|37519679|ref|NP_923056.1| diaminopimelate decarboxylase [Gloeobacter violaceus PCC 7421] gi|35210670|dbj|BAC88051.1| diaminopimelate decarboxylase [Gloeobacter violaceus PCC 7421] Length = 444 Score = 272 bits (696), Expect = 7e-71, Method: Composition-based stats. Identities = 112/424 (26%), Positives = 169/424 (39%), Gaps = 14/424 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 G L + LA TP Y + + AF D V YA KA SN Sbjct: 23 GHLMIGGCDVVDLAQRFGTPLYILDEATLRAACTQYVEAFKRHYAGDFRVLYASKAWSNL 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + G G+D VS GE+ AL A VP E + G K+ EI LA + G Sbjct: 83 AICAIVHRCGLGIDAVSAGEVHTALRAGVPGELVYLHGNNKSEAEILLAAEVGATVVADN 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 L A+S + RV P I+ +TH+ I TG + KFG ++ ++ AY Sbjct: 143 W---LDLEILSAISAECPVRVMVRVAPGIDIHTHEYIRTGHLDSKFGFDPSELAAVLAYL 199 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 + +P ++ G+ HIGSQ ++ A +LL + + + G + ++VGGGLGI Y Sbjct: 200 ARIPSLRAVGLHAHIGSQSFELAPHGDAAQLLLEWYPKALALGLSDFNELNVGGGLGIRY 259 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSA 297 D PP+ ++ I Q + EPGR LV V S K Sbjct: 260 TDDDDPPAIDEWVGTICQAVTRTCNTYNLPLPKLLCEPGRSLVGPACATAYTVGSTKTIP 319 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + + N D + G CE+GD + + ++ Sbjct: 320 SIRKYFSVDGGMSDNPRPITYKALYTAVVANKMHDGRREKVTVAGKHCESGDVLLRDVEL 379 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 GD L + TGAY + YN ++V+ + +I R + +L+ D +P Sbjct: 380 PPLERGDCLVVFSTGAYNCSMASNYNRIPRPAAVLVSDGEATLIVKRESPDDLLRCDCLP 439 Query: 418 AWLQ 421 LQ Sbjct: 440 ERLQ 443 >gi|85707825|ref|ZP_01038891.1| Orn/DAP/Arg decarboxylase, family 2 [Erythrobacter sp. NAP1] gi|85689359|gb|EAQ29362.1| Orn/DAP/Arg decarboxylase, family 2 [Erythrobacter sp. NAP1] Length = 419 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 176/422 (41%), Positives = 260/422 (61%), Gaps = 4/422 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM-VCYAL 59 M F Y G +HAENV L ++A V TP Y YS +E++ F A D + + +A+ Sbjct: 1 MDHFTYQNGVMHAENVPLPRIADDVGTPVYVYSRATLERHARVFREALDAVPDKLIAFAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K+N N AV+K L+ G G D+VS GE+RRALAA +P E+IVFSGVGKT E+ AL++GI Sbjct: 61 KSNPNLAVLKVLSREGYGADVVSVGEMRRALAAGMPPEKIVFSGVGKTRAELQAALEAGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 FN+ESE E L + A +G++A A R+NPD++A TH KISTGK ++KFG+PI Q Sbjct: 121 GQFNIESEEEGLELAELAAEMGREAQCALRINPDVDAGTHDKISTGKADNKFGVPISQAG 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++ + GV++ GV +HIGSQ+ ++ +AF L +L LR GH I H+D+GGG Sbjct: 181 QIFGKLAGQEGVRLRGVAVHIGSQLGELAPLERAFTKLGELVTSLRGAGHTITHVDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ Y + PS ++Y +++ + + +I EPGR + + G+L+T+V+ +K+ Sbjct: 241 LGVPYRAGEELPSPAEYGAMVARVTKDWGVSLIFEPGRVIAGNAGVLLTRVVRVKRGIKD 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FVI+D AMND RP LY AYH+ + D + A+IVGPICETGD A+ R Sbjct: 301 PFVIVDAAMNDLARPALYGAYHDFVAVQPRGSD---MTANIVGPICETGDTFAMGRLTDK 357 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GDL GAYGA + +YNSR + E++V+G +F ++ R+ +++ + +P W Sbjct: 358 LESGDLAVFRTAGAYGATMASSYNSRGFVAEVLVDGDKFAVVADRIDAGAIMDAERVPEW 417 Query: 420 LQ 421 L+ Sbjct: 418 LE 419 >gi|57168450|ref|ZP_00367584.1| diaminopimelate decarboxylase [Campylobacter coli RM2228] gi|305432869|ref|ZP_07402027.1| diaminopimelate decarboxylase [Campylobacter coli JV20] gi|57020258|gb|EAL56932.1| diaminopimelate decarboxylase [Campylobacter coli RM2228] gi|304444023|gb|EFM36678.1| diaminopimelate decarboxylase [Campylobacter coli JV20] Length = 402 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 166/399 (41%), Positives = 233/399 (58%), Gaps = 3/399 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + +KL QTPFY Y I++ +L NAF + + YA+KANSN ++++ L L Sbjct: 1 MDYKKLKDEFQTPFYIYDFDFIKERFLKLKNAFKARKSQIFYAVKANSNLSLLQMLVKLD 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE++RAL A + +I+FSGVGKT +E+ LAL+ I N+ESE+E+ L Sbjct: 61 SGFDCVSIGEVKRALKAGAKSYKIIFSGVGKTQEELRLALEYDILYINLESEAEMMLLES 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L KA I+ RVNP++NA TH ISTG E+KFG+ I +Y YA P ++ G Sbjct: 121 VAKELNLKARISIRVNPNVNAKTHPYISTGLNENKFGVEIDLARKMYLYAKNSPHLEPIG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQ+ I H+A ++ L ++L++ ++ D+GGGLG+ Y + P D Sbjct: 181 VHFHIGSQLLDISPIHEAAAIVAKLVRELKALQIELKFFDIGGGLGVRYEKEDVEPDLYD 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I +EPGRFLVA+ G V V+ K + K FVI+D AMND +RP+ Sbjct: 241 YAQGILAQLHGLDVTIGMEPGRFLVANSGEFVCSVLYEKHNKTKRFVIVDGAMNDLIRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYHEI N D+VG ICE+GDF A R + + GD++ I+ TGAYG Sbjct: 301 LYEAYHEILLPYNQ---GEESPCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYG 357 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + E+ + Q +IR R F++ I L+ Sbjct: 358 FSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQIALE 396 >gi|270307899|ref|YP_003329957.1| diaminopimelate decarboxylase [Dehalococcoides sp. VS] gi|270153791|gb|ACZ61629.1| diaminopimelate decarboxylase [Dehalococcoides sp. VS] Length = 434 Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats. Identities = 129/423 (30%), Positives = 193/423 (45%), Gaps = 12/423 (2%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKAN 62 + L + L TP Y + + I +N F F D+ V YA KA Sbjct: 13 EVKNNHLVIGGADVTGLCAKHGTPLYIFDESTIRQNCRDFKREFSRRYADSSVSYASKAF 72 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + A++K LA G LD+VS GEL A A P + + F G K+ +E+ LAL+ + Sbjct: 73 LHPALLKILAEEGMSLDVVSGGELSIANNAGFPMDMVYFHGNNKSAEELRLALRLHVGRI 132 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V+S E+K L++ A G I R+ P ++A+TH I+TGK + KFG P+ Q Sbjct: 133 VVDSFDEIKLLSKLADESGHIPDILLRLTPGVDAHTHHHITTGKLDSKFGFPLFQAAEAV 192 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLG 241 A + + G HIGSQI + + F A L+ D Q G +I+ +D+GGG G Sbjct: 193 GLAMAQASLNLVGFHFHIGSQIFETQPFLDAIDLVLDFAAQVQERYGFDIEELDIGGGYG 252 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIK 294 + Y D P+ S YA I + +EPGR ++A G+ + V IK Sbjct: 253 VQYEIDKPAPAVSVYAEAIGAKIVAKCHSLKLAPPSLNIEPGRAIIAQAGVALYTVGVIK 312 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 +D M D +RP LY+A +E N I G CE+GD + Sbjct: 313 DIPGIRQYASVDGGMGDNIRPALYEAKYEAVVASNVQS-AEKQKVTIAGKFCESGDILIT 371 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + ++ R GD+L + GAY S YN +++ + +IR R T ++L L Sbjct: 372 DIELPSLRAGDILAVPCCGAYCLPMSSNYNGYQRPAVVILKNGEDRLIRRRETVEDLSRL 431 Query: 414 DSI 416 DS+ Sbjct: 432 DSV 434 >gi|121997989|ref|YP_001002776.1| diaminopimelate decarboxylase [Halorhodospira halophila SL1] gi|121589394|gb|ABM61974.1| diaminopimelate decarboxylase [Halorhodospira halophila SL1] Length = 418 Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats. Identities = 168/413 (40%), Positives = 244/413 (59%), Gaps = 5/413 (1%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F + L AE + L++LA TP Y YS AIE+ + + +A G+ VCYA+KAN Sbjct: 7 FARYADRLWAEALPLDELAERFGTPCYVYSRAAIEERWALYRSAL-GVAGDVCYAVKANG 65 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N A+++ LA G+G DIVS GEL R L A A R+VFSGVGK DEI ALQ+GI CFN Sbjct: 66 NLALLQLLARHGAGFDIVSGGELERVLHAGGDAARVVFSGVGKGTDEIRRALQAGIRCFN 125 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 VES +EL+ + A + AP+A RVNPD+N TH I+TG + KFGI + + +LY Sbjct: 126 VESAAELERIASVAATENTPAPVALRVNPDVNPETHPYIATGLAQSKFGIALEEAEALYL 185 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A+ P +++ G+ HIGSQ+ + +A + L L ++L+ G ++ HID GGGLG+ Sbjct: 186 QAANDPRLEVRGIACHIGSQLLSVAPLTEAAERLAALARRLQEQGISLDHIDAGGGLGVH 245 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 Y + P + ++ ++ EPGR +VA+ GIL+T++ +K + K F I Sbjct: 246 YIDEQPPTPAEHIEAISAPLRDLGVSVLV-EPGRAIVAEAGILLTRIEYLKHNGGKEFAI 304 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D MND++RP LYDA H + + + D+VGP+CE+ D A + + G Sbjct: 305 VDAGMNDYLRPALYDAAHTLEAVT--PSEAELRPVDVVGPVCESADTFARDCTLPAAAGG 362 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 LL I GAYGAV + YN+R PE++V+G+Q H+IR R T EL+ +S+ Sbjct: 363 -LLAIRSAGAYGAVMASQYNARPRPPEVLVDGTQAHLIRRRETIDELMSGESL 414 >gi|186686026|ref|YP_001869222.1| diaminopimelate decarboxylase [Nostoc punctiforme PCC 73102] gi|186468478|gb|ACC84279.1| diaminopimelate decarboxylase [Nostoc punctiforme PCC 73102] Length = 465 Score = 272 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 117/422 (27%), Positives = 182/422 (43%), Gaps = 14/422 (3%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQAV 67 L + L +P Y + + +AF ++ V YA KA + AV Sbjct: 46 LEIGGCDVTTLVKQFGSPLYILDEETLRSACQQYRDAFKQYYKGESQVLYASKAWNCLAV 105 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 A G G+D+VS GEL AL A V E+I G K+ +E+ LA++SG+ Sbjct: 106 CAIAASEGLGIDVVSGGELYTALQAGVSPEKIYLHGNNKSREELILAIESGVTIVADNWY 165 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + G+ I R+ P I +TH+ I TG + KFG + + ++ + S Sbjct: 166 ELRTLVE--IAQPGQSIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLDEVFTFVSQ 223 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 + GV HIGSQI + + ++ + G NI ++VGGGLGI Y Sbjct: 224 QSTLDCVGVHAHIGSQIFERQPHQDLAAVMVQWLRDAGKYGLNITELNVGGGLGIKYTES 283 Query: 248 HRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADKT 300 PPS ++ I + K++ EPGR L+A + V S K + Sbjct: 284 DDPPSIEEWVKAICEVVQEACAVENLPLPKLLSEPGRSLIATACVTAYTVGSSKVIPEIR 343 Query: 301 FVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + +D M+D RP Y + + N + I G CE+GD + N + Sbjct: 344 TYVAIDGGMSDNPRPITYQSVYRAVV-ANKMSSPVTQTVTIAGKHCESGDILIKNALLPK 402 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PGD+L + TGAY + YN ++V + ++I R T+Q+LI DS+P Sbjct: 403 TEPGDILVVMGTGAYNYSMASNYNRLPRPAAVVVANGEANLILQRETYQDLIRQDSLPER 462 Query: 420 LQ 421 L+ Sbjct: 463 LK 464 >gi|313632593|gb|EFR99586.1| diaminopimelate decarboxylase [Listeria seeligeri FSL N1-067] Length = 436 Score = 272 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 131/421 (31%), Positives = 198/421 (47%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KLA TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLAEKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A PAERI F G K+++EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELYTAIKAGFPAERIHFHGNNKSVEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS---LY 182 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + + Sbjct: 134 NYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEAAIK 193 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + G + + +++GGG G Sbjct: 194 QVLHASAAFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P S+Y I +I +EPGR LV + G + KV S K Sbjct: 254 VRYTAEDEPLEPSEYVRQIMEEVRDVANANDIAIPEIWIEPGRSLVGEAGTTLYKVGSRK 313 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + +V +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 314 EVPGIRNYVAVDGGMSDNIRPALYDAHYDAVLAANPE-KVPEETVAIAGKCCESGDMLIW 372 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN P + V ++ R T++ L++ Sbjct: 373 DLPLPKSDAGEILAVFCTGAYGYAMASNYNRIPRPPVVFVEDGVDKLVVARETYENLVQN 432 Query: 414 D 414 D Sbjct: 433 D 433 >gi|153953245|ref|YP_001394010.1| hypothetical protein CKL_0608 [Clostridium kluyveri DSM 555] gi|219853879|ref|YP_002471001.1| hypothetical protein CKR_0536 [Clostridium kluyveri NBRC 12016] gi|146346126|gb|EDK32662.1| LysA [Clostridium kluyveri DSM 555] gi|219567603|dbj|BAH05587.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 431 Score = 272 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 119/426 (27%), Positives = 206/426 (48%), Gaps = 13/426 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKA 61 + + L+ +S EKL TP Y + + AF + V YA KA Sbjct: 6 NMEVKDNVLYIGGISTEKLIEDYGTPLYVIDEKLVRDKCRRYYKAFKAHKNNKVTYAGKA 65 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N A+ + + G LD+VSEGEL AL + P E+I F G KT++EI++ + + Sbjct: 66 FLNLAMCQIINSEGLYLDVVSEGELYTALKSGFPMEKIYFHGNNKTLEEIEMGIDLEVGR 125 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F V++ E+ +N A GK + R+ P I A+TH+ I TG+ + KFG + + Sbjct: 126 FVVDNLYEMDKINSLAKEKGKIQKVLLRITPGIEAHTHEYIKTGQIDSKFGFTMINGEII 185 Query: 182 Y--AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGG 238 A +L +K++G+ HIGSQI + + + +++ L ++++ + ++ +D+GG Sbjct: 186 DVVKKAISLSNIKLTGIHCHIGSQIFETKPYEDEVEIMLKLVRKIKDETGYEVEELDLGG 245 Query: 239 GLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 G GI Y + +P + D+ A + + G +++EPGR ++ + G + + Sbjct: 246 GFGIYYTPEDKPKTVEDFCSIILERAEMKSKELGIRVPSLVIEPGRSIIGNAGTTLYTIG 305 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 +IK+ +D M D +RP LY+A +E D + I G CE+GD Sbjct: 306 AIKEIPGVRKYVSVDGGMVDNIRPALYNAPYECTVANRVEDDSKEV-VTIAGKCCESGDV 364 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + N ++ + GD+L + TGAYG + YN + ++V Q +I R +F + Sbjct: 365 LIKNVQLPKVQSGDILAVFTTGAYGYSMASNYNKIPIPAVVLVKNGQSRLISKRQSFDNM 424 Query: 411 IELDSI 416 IE + Sbjct: 425 IENQIM 430 >gi|296188475|ref|ZP_06856863.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7] gi|296046739|gb|EFG86185.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7] Length = 433 Score = 272 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 121/422 (28%), Positives = 187/422 (44%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 +G L +LA TP Y + F + F+ G+++ V YA KA N Sbjct: 12 KGHLEIGKCDTTELAKEFGTPLYVVDEDLVRSTCREFKDNFEIEGIESEVIYASKAFLNL 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ K + G LD+VS GEL AL A P RI G KT E+ +A+++GI V+ Sbjct: 72 AIAKVICEEGLSLDVVSGGELYTALKANFPVSRIYMHGNNKTEGELSMAIEAGIGRIVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YA 183 + +EL+ + SL KK + RVNP I A+TH+ I T K + KFG I Sbjct: 132 NRNELEVIEYLCKSLNKKVDVLLRVNPGIEAHTHEYIQTSKNDSKFGESIFDEDMCKIIN 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGI 242 V G HIGSQI + +SF+ + +++++ + + +++GGG G+ Sbjct: 192 RFQNSESVNFKGFHCHIGSQIFEEKSFYSEVSDMIKFLEKIKNQCGFSTEELNLGGGFGV 251 Query: 243 AYHSDH-------RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y + Q G K+++EPGR ++A+ G + V KK Sbjct: 252 YYSEGDKPVNLKSCLKNMLSILKEESQKSGLNIKKVMIEPGRSIIANAGTTLYNVGGTKK 311 Query: 296 -SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 K ++ +D M D R LYDA +E + I I G CE+GD I Sbjct: 312 TYGGKQYIFIDGGMADNPRTALYDAKYEAVVANKVNSENSEI-YTIAGKCCESGDIIIKE 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ GD++ + TGAY S YN + V + I R T++++I D Sbjct: 371 IELPEVERGDIMAVLTTGAYNYSMSSNYNRIPKPAVVFVKEGEAKIAVKRETYEDIIRND 430 Query: 415 SI 416 + Sbjct: 431 IL 432 >gi|167629948|ref|YP_001680447.1| diaminopimelate decarboxylase [Heliobacterium modesticaldum Ice1] gi|167592688|gb|ABZ84436.1| diaminopimelate decarboxylase [Heliobacterium modesticaldum Ice1] Length = 437 Score = 272 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 118/426 (27%), Positives = 191/426 (44%), Gaps = 13/426 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT-MVCYALKANSNQAV 67 G+L L +P Y + +N + AF V +A KA A+ Sbjct: 13 GNLAIGGCDATDLIKEFGSPLYVMDEAHLRENCRKYYQAFSASGAGEVLFASKAFMTMAM 72 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G GLD+VS GEL A A P E++ F G KT E+ A++ G+ V++ Sbjct: 73 CRLVEQEGLGLDVVSGGELYTARRAGFPMEKVYFHGNNKTPAELRQAIEYGVGHIVVDNL 132 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E LN A G + R+ P I+ +TH+ + TG+ + KFG + +L + Sbjct: 133 YEADLLNAIAGETGALVRVLLRITPGIDCHTHEFVRTGQIDSKFGFTLPTGQALAGVKAV 192 Query: 188 LPGVKI--SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGIAY 244 L + G+ HIGSQI ++ESF A +++ ++R +++GGG GI Y Sbjct: 193 LERGNLIYDGLHCHIGSQIFELESFGYAAEVMMTFIDEIRRETGVETAILNLGGGFGIRY 252 Query: 245 HSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 P ++YA + + G K+++EPGR +VA G + V S+K+ Sbjct: 253 TEADTPGDVAEYARIVLSAVALEAEKRGLPTPKVLVEPGRSIVATAGTTLYTVGSVKEII 312 Query: 298 DKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + +D M D RP LY + +E + + N A + G CE+GD + + Sbjct: 313 GVRKYVAVDGGMTDNPRPALYGSRYE-SMLANKATQEPEEVVSVTGKCCESGDMLLWDVS 371 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD+L + TGAY S YN + V + ++ R + +LI D I Sbjct: 372 LPKVESGDILAVSCTGAYNYTMSMNYNRIGRPAVVFVRDGKAAVVVERESLDDLIRNDRI 431 Query: 417 PAWLQK 422 P +LQ+ Sbjct: 432 PPYLQR 437 >gi|239944279|ref|ZP_04696216.1| putative diaminopimelate decarboxylase [Streptomyces roseosporus NRRL 15998] gi|239990734|ref|ZP_04711398.1| putative diaminopimelate decarboxylase [Streptomyces roseosporus NRRL 11379] gi|291447747|ref|ZP_06587137.1| diaminopimelate decarboxylase [Streptomyces roseosporus NRRL 15998] gi|291350694|gb|EFE77598.1| diaminopimelate decarboxylase [Streptomyces roseosporus NRRL 15998] Length = 463 Score = 272 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 122/419 (29%), Positives = 195/419 (46%), Gaps = 12/419 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G+L +++ +LA TP Y + +++AF G D V YA KA ++AV Sbjct: 45 DGALTVGGIAVARLAEEFGTPAYFLDESDFRARCRAWADAF-GPDADVFYAGKAFLSRAV 103 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ L G LD+ S GEL AL A +PAERI F G KT+ EI+ A+++G+ ++S Sbjct: 104 VRWLKEEGLNLDVCSGGELTTALDAGMPAERIAFHGNNKTVAEIERAVEAGVGRIVLDSF 163 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYA 185 E+ + A G + + RV + A+TH+ I+T ++ KFGI + A Sbjct: 164 QEIVRVAHIAQRHGVRQRVQIRVTVGVEAHTHEFIATAHEDQKFGIALADGQAAEAVRRA 223 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 +L G+++ GV HIGSQI + F + + + L ++R + ID+GGGLGIAY Sbjct: 224 LSLDGLELIGVHSHIGSQIFDMAGFEVSARRVVQLLAEIRDEHGVELPEIDLGGGLGIAY 283 Query: 245 HSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 SD P + A + +I +EPGR +V + +V +IK Sbjct: 284 TSDDDPREPHEIAKALSDIVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLE 343 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T +V+ D + +VG CE+GD + + + Sbjct: 344 GLRTYVSVDGGMSDNIRTALYDAEYSVALVSRTSDAEPMLVRVVGKHCESGDIVVKDAFL 403 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDL+ + TGAY + YN L P + V + +I R T ++L+ LD Sbjct: 404 PADLAPGDLIAVPATGAYCRSMASNYNHALRPPVVAVRDGEARVIVRRETEEDLLRLDV 462 >gi|224438040|ref|ZP_03658979.1| diaminopimelate decarboxylase [Helicobacter cinaedi CCUG 18818] gi|313144485|ref|ZP_07806678.1| diaminopimelate decarboxylase [Helicobacter cinaedi CCUG 18818] gi|313129516|gb|EFR47133.1| diaminopimelate decarboxylase [Helicobacter cinaedi CCUG 18818] Length = 436 Score = 272 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 171/410 (41%), Positives = 232/410 (56%), Gaps = 11/410 (2%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 ++ LA +TP Y Y I +L AF +++CYALKANSN ++I L L Sbjct: 3 DIDYHTLAETYKTPLYVYDLQKISSAFLRLKEAFRARKSLICYALKANSNLSIIHHLGTL 62 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 GSG D VS GE+RRAL A + +I+FSGVGK +EI ALQS I NVESE EL + Sbjct: 63 GSGADCVSIGEVRRALRAGILKYKIIFSGVGKQDNEIQEALQSDILFLNVESEGELGRIE 122 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 A SL K A I+ RVNP+I+A TH ISTG E+KFG+ I Q ++Y +A P ++ Sbjct: 123 SIAKSLNKVARISIRVNPNIDAKTHPYISTGLSENKFGVDIQQAKAMYIFAKNSPHIEPV 182 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+ HIGSQ+ IE +A + L L + +++ DVGGG+GI Y + + Sbjct: 183 GIHFHIGSQLTDIEPIKEAAHKVAQLAHSLIALKIDLKFFDVGGGIGIRY-EEENLINPY 241 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 DYA I + L II EPGRFLV + G+L+T+V+ K + +K FVI D AMND MRP Sbjct: 242 DYAQAILEALYGLDLTIICEPGRFLVGESGVLLTRVLYEKHNGEKRFVITDAAMNDLMRP 301 Query: 315 TLYDAYHEINYIVNPAGDRLHIH----------ADIVGPICETGDFIALNRKIALPRPGD 364 TLY A H+I Y+ D+VGPICE+GD++A N + GD Sbjct: 302 TLYHATHKIEYVEKIQNAEHIGERSVESSLCDMCDVVGPICESGDYLAKNIALPKLTHGD 361 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 LL IE GAYG + YN+RL E+++ + +I+ R F+ LI + Sbjct: 362 LLKIENVGAYGYSMASNYNTRLRPAEVVIENGRARLIKNRECFESLISDE 411 >gi|226311991|ref|YP_002771885.1| diaminopimelate decarboxylase [Brevibacillus brevis NBRC 100599] gi|226094939|dbj|BAH43381.1| diaminopimelate decarboxylase [Brevibacillus brevis NBRC 100599] Length = 440 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 138/428 (32%), Positives = 192/428 (44%), Gaps = 14/428 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT--MVCYALKANSN 64 +G+L +LA TP Y Y I F NAF V YA KA Sbjct: 11 EQGNLEIGGCDSTQLAATYGTPLYVYDEQQIRTKCREFVNAFHNTGFSFQVAYASKAFCT 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ K + G LD+VS GEL AL A P ERI F G K+ DE+ +AL + I CF V Sbjct: 71 MAMCKLVEEEGLSLDVVSGGELYTALQAGFPVERIHFHGNNKSYDELIMALDAKIGCFVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL L Q A +K I RV P + A+TH+ ISTG+ + KFG + +L A Sbjct: 131 DNFYELHMLAQLAEERNEKVAILLRVTPGVEAHTHEYISTGQIDSKFGFDVQNGQALEAI 190 Query: 185 ASTLPGVKIS--GVDMHIGSQIDQIESFHKAFKL-LRDLTQQLRSNGHNIQHIDVGGGLG 241 + + GV HIGSQI + E F A K L + G + ++VGGG G Sbjct: 191 QFSHESNHLHLLGVHSHIGSQIFETEGFLVAVKRLTELLGEAKEKLGFLPEVLNVGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIK 294 I Y P + Y I +I +EPGR ++ D G + ++ S K Sbjct: 251 IRYVEGDTPQPAETYIKAITDIVRQELTALAIPLPEIWIEPGRSIIGDAGTTLYRIGSHK 310 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + I +D M D +RP LYDA +E N I G CE+GD + Sbjct: 311 NIPNVRKYIAVDGGMTDNLRPALYDAEYEAAI-ANKMNAPATEVVSIAGKCCESGDMLIW 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ + GD+L + TGAYG + YN I V + ++ R T+ E++ Sbjct: 370 DVKLPEAQAGDILAVPSTGAYGYSMANNYNRIARPAVIFVKDGEAEVVVRRETYAEVVGN 429 Query: 414 DSIPAWLQ 421 D +P Q Sbjct: 430 DVLPKRAQ 437 >gi|289435300|ref|YP_003465172.1| hypothetical protein lse_1939 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171544|emb|CBH28090.1| lysA [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 436 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 132/421 (31%), Positives = 198/421 (47%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KLA TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLAEKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A PAERI F G K+++EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELYTAIKAGFPAERIHFHGNNKSVEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 134 NYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAESAIK 193 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + G + + +++GGG G Sbjct: 194 QVLHASAAFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P S+Y I +I +EPGR LV + G + KV S K Sbjct: 254 VRYTAEDEPLEPSEYVRQIMEEVRDVANTNDIAIPEIWIEPGRSLVGEAGTTLYKVGSRK 313 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + +V +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 314 EVPGIRNYVAVDGGMSDNIRPALYDAHYDAVLAANPE-KVPEETVAIAGKCCESGDMLIW 372 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN P + V ++ R T++ L++ Sbjct: 373 DLPLPKSDAGEILAVFCTGAYGYAMASNYNRIPRPPVVFVEDGVDKLVVARETYENLVQN 432 Query: 414 D 414 D Sbjct: 433 D 433 >gi|299821617|ref|ZP_07053505.1| diaminopimelate decarboxylase [Listeria grayi DSM 20601] gi|299817282|gb|EFI84518.1| diaminopimelate decarboxylase [Listeria grayi DSM 20601] Length = 488 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 129/422 (30%), Positives = 186/422 (44%), Gaps = 15/422 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSN 64 EG L V KLA TP Y Y I F F+ M V YA KA S Sbjct: 64 QEGHLEIGGVDTIKLAEKYGTPLYVYDVALIRDRARGFKRTFEEMGITAQVAYASKAFSA 123 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + +A G +D+VS GEL A+ A PAE I F G KT +EI++AL I C V Sbjct: 124 IAIYQLMAEEGLSVDVVSGGELYTAIKAGFPAELIHFHGNNKTREEIEMALDYEIGCIVV 183 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E+ L +K + RV P I A+TH I TG+++ KFG + + A Sbjct: 184 DNFYEIDLLKTILSERQQKVSVLVRVTPGIEAHTHDYILTGQEDSKFGFGLDNGQAEKAL 243 Query: 185 ---ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGL 240 + G+ HIGSQI + F A + D + R +++GGG Sbjct: 244 QLLLQDSAYFDVKGLHCHIGSQIFETTGFKVAAHRVMDKLVEWRDAFGFKASVLNLGGGF 303 Query: 241 GIAYHSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 G+ Y +D P ++Y I Q +I +EPGR LV + G + + S Sbjct: 304 GVRYTADDEPLEPAEYVRQIILEVKEVAQQNELAVPEIWIEPGRALVGEAGTTLYSIGSR 363 Query: 294 KKSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K+ I +D MND +RP LYDA +E N I G CE+GD + Sbjct: 364 KEVPGIRDYIAVDGGMNDNIRPALYDAKYEAVI-ANHPEKAAEETVSIAGKCCESGDMLI 422 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 + + + G++L + TGAYG + YN + V ++ R T+ +LI+ Sbjct: 423 WDIPLPNMQSGEILAVFCTGAYGYAMASNYNRICRPAVVFVENGIDKLVVARETYDDLIQ 482 Query: 413 LD 414 D Sbjct: 483 ND 484 >gi|227877371|ref|ZP_03995442.1| diaminopimelate decarboxylase [Lactobacillus crispatus JV-V01] gi|256848696|ref|ZP_05554130.1| diaminopimelate decarboxylase [Lactobacillus crispatus MV-1A-US] gi|262045896|ref|ZP_06018860.1| diaminopimelate decarboxylase [Lactobacillus crispatus MV-3A-US] gi|293381825|ref|ZP_06627797.1| diaminopimelate decarboxylase [Lactobacillus crispatus 214-1] gi|312978255|ref|ZP_07789998.1| diaminopimelate decarboxylase [Lactobacillus crispatus CTV-05] gi|227863039|gb|EEJ70487.1| diaminopimelate decarboxylase [Lactobacillus crispatus JV-V01] gi|256714235|gb|EEU29222.1| diaminopimelate decarboxylase [Lactobacillus crispatus MV-1A-US] gi|260573855|gb|EEX30411.1| diaminopimelate decarboxylase [Lactobacillus crispatus MV-3A-US] gi|290921611|gb|EFD98641.1| diaminopimelate decarboxylase [Lactobacillus crispatus 214-1] gi|310894774|gb|EFQ43845.1| diaminopimelate decarboxylase [Lactobacillus crispatus CTV-05] Length = 436 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 119/422 (28%), Positives = 193/422 (45%), Gaps = 14/422 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSN 64 +G L V + +LA TP Y I + F F+ + V YA KA + Sbjct: 12 EQGHLTIGGVDIVELAQKYGTPLVVYDVDQIRRQIRAFKKVFEEENMAYAVSYASKAFAA 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + +A G+ D+VS GEL A+ A P ER+ F G K++ E+++A+++ + + Sbjct: 72 IAMYQVIAEEGAYTDVVSAGELFTAIKANFPMERVSFHGNNKSLTELEMAVKNHVGKIII 131 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E++ L Q + R+ P I+A+TH+ TG+ + KFG + + A Sbjct: 132 DNFHEIQLLAQVLKKYDATISVMLRIAPGISAHTHEYDQTGQIDSKFGFDLESGQAEKAL 191 Query: 185 ASTL--PGVKISGVDMHIGSQIDQIESFHK-AFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 L P +K+ G+ HIGSQI + F A KL+ G+ Q I+VGGG G Sbjct: 192 KQVLANPRMKMLGIHAHIGSQIFALNGFEMGAQKLMVVAQDWREKYGYLAQVINVGGGFG 251 Query: 242 IAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y + P ++ + +I +EPGR +V G + V S K Sbjct: 252 IKYTQEDHPLRPEEFVKTIVKVIKTEAEKMNYPLPEIDIEPGRSIVGPAGYNLYTVGSRK 311 Query: 295 KSADKT-FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 ++ +D M D +RP LY A +E +P L H I G CE+GD +A Sbjct: 312 DIPGYRSYITVDGGMGDNIRPALYQAKYETVLATDPQA-PLTEHVRIAGKYCESGDILAE 370 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 ++ + + GDLL + TGAYG + YN + + ++ R + ++L+ L Sbjct: 371 DQALPQVKAGDLLAMLDTGAYGYSMASNYNRNPRPAVVFAENGKAKLVIKRESLEDLVHL 430 Query: 414 DS 415 D Sbjct: 431 DQ 432 >gi|332312393|gb|EGJ25488.1| Diaminopimelate decarboxylase [Listeria monocytogenes str. Scott A] Length = 436 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 129/421 (30%), Positives = 194/421 (46%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KL TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLTEKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+ +EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +K + RV P I A+TH I TG+ + KFG + + A Sbjct: 134 NYYEISLLEDILIERNEKVSVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 193 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + G + + +++GGG G Sbjct: 194 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P S+Y I +I +EPGR LV + G + KV S K Sbjct: 254 VRYTAEDEPLEPSEYVRQIMDEVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRK 313 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + ++ +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 314 EVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIW 372 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN P + V +I R T++ L++ Sbjct: 373 DLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQN 432 Query: 414 D 414 D Sbjct: 433 D 433 >gi|304407007|ref|ZP_07388661.1| diaminopimelate decarboxylase [Paenibacillus curdlanolyticus YK9] gi|304343994|gb|EFM09834.1| diaminopimelate decarboxylase [Paenibacillus curdlanolyticus YK9] Length = 443 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 132/429 (30%), Positives = 193/429 (44%), Gaps = 14/429 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 +G L L LA TP Y + + F AF G+ V YA KA S Sbjct: 14 KGHLTIGGCDLTDLAKEYGTPLYIVDEAFVRQRAREFVEAFRATGLKFQVAYASKAFSVM 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ LD+VS+GEL AL A P ERI F G KT +EI++A+ +GI CF V+ Sbjct: 74 AMCAIAEQENLSLDVVSDGELYTALQAGFPVERIHFHGNNKTPEEINMAIDAGIGCFVVD 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ LN A GK + R+ P + A+TH ISTG+++ KFG + + A Sbjct: 134 NFVEMSLLNALAADKGKTVNVLLRITPGVEAHTHDFISTGQQDSKFGFDLGNGTAFRAIE 193 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGI 242 L + + GV HIGSQI +++ F A + ++R G I+VGGG GI Sbjct: 194 ETLKLGNLNLLGVHSHIGSQIFEVDGFGMAVDKVAKFAVKVRDELGKTFSVINVGGGFGI 253 Query: 243 AYHSDHRPPSSSDYASLIHQYF-------GNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P S Y + I +I +EPGR +V D G + + + K+ Sbjct: 254 RYVEGDSPLPLSTYVNAIADAIISNFTAANYPTPEIWIEPGRSMVGDAGTTLYTIGTHKE 313 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 I +D M D RP LY + +E N A + G CE+GD + + Sbjct: 314 IPGVRKYIAVDGGMTDNPRPALYGSKYEAVL-ANRANAANEETVTVAGKACESGDMLIWD 372 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ GDLL + TGAY + YN + V + ++ R T ++++ D Sbjct: 373 LELPKSESGDLLAVFCTGAYNYAMASNYNRIRRPAVVFVKDGEASLVVKRETLEDIVVND 432 Query: 415 SIPAWLQKT 423 IP L+K Sbjct: 433 VIPQRLRKA 441 >gi|315150595|gb|EFT94611.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0012] Length = 436 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 14 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 70 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 130 IGTIVIDNFYEIDLLEELLATRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 189 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 190 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 249 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 250 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 309 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 310 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANRDGHDSVKKVTVVGKYCESG 369 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T++ Sbjct: 370 DVLLRDVLLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYE 429 Query: 409 ELIELDS 415 ++ LD Sbjct: 430 DMTTLDC 436 >gi|46908186|ref|YP_014575.1| diaminopimelate decarboxylase [Listeria monocytogenes serotype 4b str. F2365] gi|226224557|ref|YP_002758664.1| diaminopimelate decarboxylase [Listeria monocytogenes Clip81459] gi|254825552|ref|ZP_05230553.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-194] gi|254852854|ref|ZP_05242202.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL R2-503] gi|254931876|ref|ZP_05265235.1| diaminopimelate decarboxylase [Listeria monocytogenes HPB2262] gi|255520093|ref|ZP_05387330.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-175] gi|300763736|ref|ZP_07073733.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL N1-017] gi|46881456|gb|AAT04752.1| diaminopimelate decarboxylase [Listeria monocytogenes serotype 4b str. F2365] gi|225877019|emb|CAS05728.1| Putative diaminopimelate decarboxylase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606187|gb|EEW18795.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL R2-503] gi|293583427|gb|EFF95459.1| diaminopimelate decarboxylase [Listeria monocytogenes HPB2262] gi|293594793|gb|EFG02554.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-194] gi|300515472|gb|EFK42522.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL N1-017] gi|328472794|gb|EGF43643.1| diaminopimelate decarboxylase [Listeria monocytogenes 220] Length = 436 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 130/421 (30%), Positives = 195/421 (46%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KL TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLTEKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+ +EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 134 NYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 193 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + G + + +++GGG G Sbjct: 194 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P S+Y I +I +EPGR LV + G + KV S K Sbjct: 254 VRYTAEDEPLEPSEYVRQIMDEVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRK 313 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + ++ +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 314 EVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIW 372 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN P + V +I R T++ L++ Sbjct: 373 DLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQN 432 Query: 414 D 414 D Sbjct: 433 D 433 >gi|256762439|ref|ZP_05503019.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T3] gi|256683690|gb|EEU23385.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T3] Length = 436 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 14 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 70 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 130 IGTIVIDNFYEIDLLEELLTTRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 189 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 190 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 249 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 250 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 309 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 310 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANRDGHDSVKKVTVVGKYCESG 369 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T++ Sbjct: 370 DVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYE 429 Query: 409 ELIELDS 415 ++ LD Sbjct: 430 DMTTLDC 436 >gi|254387531|ref|ZP_05002770.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294815081|ref|ZP_06773724.1| Diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|326443444|ref|ZP_08218178.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|197701257|gb|EDY47069.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294327680|gb|EFG09323.1| Diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 463 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 121/420 (28%), Positives = 191/420 (45%), Gaps = 12/420 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + + +LA TP Y +++AF G V YA KA ++A Sbjct: 44 EDGVATVGGLDVTRLAEEFGTPAYILDEDDFRARCRAWADAF-GPGADVFYAGKAFLSRA 102 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ L G LD+ S GEL AL A +PA+RI F G K+++EI+ A+++G+ ++S Sbjct: 103 VVRWLHEEGLNLDVCSGGELLTALDAGMPADRIAFHGNNKSLEEIERAVRAGVGRIVLDS 162 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAY 184 E+ + A LG + + R+ + A+TH+ I+T ++ KFG+P+ Sbjct: 163 FQEIARVAHVAQGLGVRQRVLIRITVGVEAHTHEFIATAHEDQKFGLPLAGGQAAEGVRR 222 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A L G+++ G+ HIGSQI F A + L QQ+R + ID+GGGLGIA Sbjct: 223 ALGLDGLELIGLHSHIGSQIFDTSGFEVAAHRVVGLLQQVRDEHGVELPEIDLGGGLGIA 282 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P A +H+ +I +EPGR +V + +V +IK Sbjct: 283 YTPDDDPREPRHIAKALHEIVTRECENAGLRPPRISVEPGRAIVGPTAFTLYEVGTIKPL 342 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + T +V+ D + + +VG CE+GD + + Sbjct: 343 PGLRTYVSVDGGMSDNIRTALYDAEYSVSLVSRVSDAAPMLSRVVGKHCESGDIVVKDAF 402 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + PGDLL + TGAY + YN L P + V +I R T ++L+ LD Sbjct: 403 LPADLAPGDLLAVPATGAYCRSMASNYNHALRPPVVAVRDGAARVIVRRETEEDLLRLDV 462 >gi|313607903|gb|EFR84055.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL F2-208] Length = 436 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 129/421 (30%), Positives = 194/421 (46%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KL TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLTEKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+ +EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 134 NYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 193 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + G + + +++GGG G Sbjct: 194 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P +Y I +I +EPGR LV + G + KV S K Sbjct: 254 VRYTAEDEPLEPGEYVRQIMDEVRDVANSNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRK 313 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + ++ +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 314 EVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIW 372 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN P + V +I R T++ L++ Sbjct: 373 DLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQN 432 Query: 414 D 414 D Sbjct: 433 D 433 >gi|85373232|ref|YP_457294.1| diaminopimelate decarboxylase [Erythrobacter litoralis HTCC2594] gi|84786315|gb|ABC62497.1| diaminopimelate decarboxylase [Erythrobacter litoralis HTCC2594] Length = 420 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 174/422 (41%), Positives = 251/422 (59%), Gaps = 5/422 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM-VCYAL 59 M F G LHAE+V L ++A V TP Y YS +E++ F+ + + +A+ Sbjct: 1 MDHFSLNSGVLHAEDVPLPQIAEEVGTPVYVYSRATLERHARVFTEGLAEVPDKLIAFAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K+N N AV+K L G G D+VS GELRRALAA + +IVFSGVGKT E+ L L GI Sbjct: 61 KSNPNLAVLKVLQKAGFGADVVSGGELRRALAAGMAPAKIVFSGVGKTRAELMLGLDEGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 FN+ES E + L + A + G+ AP R+NPD++A TH+KISTGK E+KFGIP+ Sbjct: 121 GQFNIESREEGRELAELAAARGELAPACLRINPDVDAKTHEKISTGKAENKFGIPLVHAR 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++A L G+ + G+ +HIGSQ+ +E AF + L LR GH I H+D+GGG Sbjct: 181 EVFAELVQLDGLHLRGIAVHIGSQLGDLEPLETAFGKVGKLVADLREAGHLITHVDLGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA-D 298 LG+ Y + PS +DY +++ + + + + EPGR + + GIL+T+VI +K+ Sbjct: 241 LGVPYKAGEEFPSPADYGAMVARVTRDWRVHLTFEPGRVIAGNAGILLTRVIRVKRGGNG 300 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 FVI+D AMND RP LY A+H+ + H+ A+IVGPICETGD A +RK Sbjct: 301 PPFVIVDAAMNDLARPALYGAWHDFD---AVEPSGEHMTANIVGPICETGDTFARDRKCD 357 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 + GDL GAYGA + +YNSR + E++V+G QF ++ R+ +++ + +P Sbjct: 358 ALQSGDLAVFRTAGAYGATMASSYNSRGFVAEVLVDGDQFAVVADRIDAGAIMDAERVPE 417 Query: 419 WL 420 WL Sbjct: 418 WL 419 >gi|256785194|ref|ZP_05523625.1| diaminopimelate decarboxylase [Streptomyces lividans TK24] gi|289769087|ref|ZP_06528465.1| diaminopimelate decarboxylase [Streptomyces lividans TK24] gi|289699286|gb|EFD66715.1| diaminopimelate decarboxylase [Streptomyces lividans TK24] Length = 463 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 120/419 (28%), Positives = 193/419 (46%), Gaps = 12/419 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + + + +LA TP Y + + AF G D V YA KA ++AV Sbjct: 45 DGVVTVGGIPVTQLAEEYGTPAYLLDEADFRERARAWRTAF-GDDADVFYAGKAFLSRAV 103 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ L G LD+ S GEL AL+A +PAERI F G K+ +EI+ A+++G+ ++S Sbjct: 104 VRWLDEEGLNLDVCSGGELATALSAGMPAERIAFHGNNKSPEEIERAVRAGVGRIVLDSF 163 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYA 185 E+ + A SLGK+ + R+ + A+TH+ I+T ++ KFGIP+ A Sbjct: 164 QEIVRVAHIAQSLGKRQRVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRA 223 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L G+++ G+ HIGSQI + F A + L + +R + ID+GGGLGIAY Sbjct: 224 LKLDGLEVIGIHSHIGSQIFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAY 283 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 SD P + A + + +I +EPGR +V + +V ++K Sbjct: 284 TSDDDPREPHEIAKALTEIVTRECEAARLATPRISVEPGRAIVGPTAFTLYEVGTVKPLE 343 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T + + D + +VG CE+GD + + + Sbjct: 344 GLRTYVSVDGGMSDNIRTALYDAEYSVALASRTSDAEPMLVRVVGKHCESGDIVVKDAFL 403 Query: 358 AL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDL+ + TGAY + YN L P + V ++ R T ++L+ LD Sbjct: 404 PEDLAPGDLIAVPATGAYCRSMASNYNHALRPPVVAVRDGAARVVVRRETEEDLLRLDV 462 >gi|294779094|ref|ZP_06744505.1| diaminopimelate decarboxylase [Enterococcus faecalis PC1.1] gi|294453819|gb|EFG22210.1| diaminopimelate decarboxylase [Enterococcus faecalis PC1.1] gi|323480667|gb|ADX80106.1| diaminopimelate decarboxylase [Enterococcus faecalis 62] Length = 430 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 8 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 63 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 64 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 123 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 124 IGTIVIDNFYEIDLLEELLTTRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 183 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 184 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 243 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 244 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 303 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 304 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANREGHDSVKKVTVVGKYCESG 363 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T++ Sbjct: 364 DVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYE 423 Query: 409 ELIELDS 415 ++ LD Sbjct: 424 DMTTLDC 430 >gi|229550075|ref|ZP_04438800.1| diaminopimelate decarboxylase [Enterococcus faecalis ATCC 29200] gi|255972853|ref|ZP_05423439.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T1] gi|256619013|ref|ZP_05475859.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis ATCC 4200] gi|256958924|ref|ZP_05563095.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis DS5] gi|257078955|ref|ZP_05573316.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis JH1] gi|257422677|ref|ZP_05599667.1| diaminopimelate decarboxylase [Enterococcus faecalis X98] gi|307271076|ref|ZP_07552359.1| diaminopimelate decarboxylase [Enterococcus faecalis TX4248] gi|307275020|ref|ZP_07556183.1| diaminopimelate decarboxylase [Enterococcus faecalis TX2134] gi|312900700|ref|ZP_07759997.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0470] gi|312951434|ref|ZP_07770331.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0102] gi|229304779|gb|EEN70775.1| diaminopimelate decarboxylase [Enterococcus faecalis ATCC 29200] gi|255963871|gb|EET96347.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T1] gi|256598540|gb|EEU17716.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis ATCC 4200] gi|256949420|gb|EEU66052.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis DS5] gi|256986985|gb|EEU74287.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis JH1] gi|257164501|gb|EEU94461.1| diaminopimelate decarboxylase [Enterococcus faecalis X98] gi|306508468|gb|EFM77575.1| diaminopimelate decarboxylase [Enterococcus faecalis TX2134] gi|306512574|gb|EFM81223.1| diaminopimelate decarboxylase [Enterococcus faecalis TX4248] gi|310630590|gb|EFQ13873.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0102] gi|311292181|gb|EFQ70737.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0470] gi|315033910|gb|EFT45842.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0017] gi|315036920|gb|EFT48852.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0027] gi|315152542|gb|EFT96558.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0031] gi|315155821|gb|EFT99837.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0043] gi|315158012|gb|EFU02029.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0312] gi|315166786|gb|EFU10803.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1341] gi|327535074|gb|AEA93908.1| diaminopimelate decarboxylase [Enterococcus faecalis OG1RF] Length = 436 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 14 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 70 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 130 IGTIVIDNFYEIDLLEELLTTRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 189 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 190 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 249 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 250 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 309 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 310 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANREGHDSVKKVTVVGKYCESG 369 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T++ Sbjct: 370 DVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYE 429 Query: 409 ELIELDS 415 ++ LD Sbjct: 430 DMTTLDC 436 >gi|217963896|ref|YP_002349574.1| diaminopimelate decarboxylase [Listeria monocytogenes HCC23] gi|217333166|gb|ACK38960.1| diaminopimelate decarboxylase [Listeria monocytogenes HCC23] gi|307571534|emb|CAR84713.1| lysA [Listeria monocytogenes L99] Length = 436 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 129/421 (30%), Positives = 195/421 (46%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KL TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLTEKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+ +EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 134 NYYEISLLEEILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 193 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + G + + +++GGG G Sbjct: 194 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P +Y I +I +EPGR LV + G + KV S K Sbjct: 254 VRYTAEDEPLEPGEYVRQIMDEVRDVANSNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRK 313 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + ++ +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 314 EVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIW 372 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN P + V +I R T++ L++ Sbjct: 373 DLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGIDKLIVARETYENLVQN 432 Query: 414 D 414 D Sbjct: 433 D 433 >gi|256961983|ref|ZP_05566154.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis Merz96] gi|293382282|ref|ZP_06628221.1| diaminopimelate decarboxylase [Enterococcus faecalis R712] gi|293389458|ref|ZP_06633915.1| diaminopimelate decarboxylase [Enterococcus faecalis S613] gi|307289045|ref|ZP_07569001.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0109] gi|312907476|ref|ZP_07766467.1| diaminopimelate decarboxylase [Enterococcus faecalis DAPTO 512] gi|312910094|ref|ZP_07768941.1| diaminopimelate decarboxylase [Enterococcus faecalis DAPTO 516] gi|256952479|gb|EEU69111.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis Merz96] gi|291080227|gb|EFE17591.1| diaminopimelate decarboxylase [Enterococcus faecalis R712] gi|291081075|gb|EFE18038.1| diaminopimelate decarboxylase [Enterococcus faecalis S613] gi|306499754|gb|EFM69115.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0109] gi|310626504|gb|EFQ09787.1| diaminopimelate decarboxylase [Enterococcus faecalis DAPTO 512] gi|311289367|gb|EFQ67923.1| diaminopimelate decarboxylase [Enterococcus faecalis DAPTO 516] gi|315163956|gb|EFU07973.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1302] Length = 436 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 14 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 70 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 130 IGTIVIDNFYEIDLLEELLATRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 189 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 190 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 249 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 250 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 309 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 310 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANRDGHDSVKKVTVVGKYCESG 369 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T++ Sbjct: 370 DVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYE 429 Query: 409 ELIELDS 415 ++ LD Sbjct: 430 DMTTLDC 436 >gi|257416043|ref|ZP_05593037.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis AR01/DG] gi|257157871|gb|EEU87831.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis ARO1/DG] Length = 436 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 14 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 70 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 130 IGTIVIDNFYEIDLLEELLATRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 189 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 190 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 249 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 250 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 309 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 310 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANREGHDSVKKVTVVGKYCESG 369 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T++ Sbjct: 370 DVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYE 429 Query: 409 ELIELDS 415 ++ LD Sbjct: 430 DMTTLDC 436 >gi|300861365|ref|ZP_07107452.1| diaminopimelate decarboxylase [Enterococcus faecalis TUSoD Ef11] gi|295112942|emb|CBL31579.1| diaminopimelate decarboxylase [Enterococcus sp. 7L76] gi|300850404|gb|EFK78154.1| diaminopimelate decarboxylase [Enterococcus faecalis TUSoD Ef11] Length = 430 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 8 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 63 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 64 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 123 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 124 IGTIVIDNFYEIDLLEELLATRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 183 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 184 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 243 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 244 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 303 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 304 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANREGHDSVKKVTVVGKYCESG 363 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T++ Sbjct: 364 DVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYE 423 Query: 409 ELIELDS 415 ++ LD Sbjct: 424 DMTTLDC 430 >gi|229545884|ref|ZP_04434609.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1322] gi|255975909|ref|ZP_05426495.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T2] gi|256853066|ref|ZP_05558436.1| diaminopimelate decarboxylase [Enterococcus faecalis T8] gi|256965181|ref|ZP_05569352.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis HIP11704] gi|257082601|ref|ZP_05576962.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis E1Sol] gi|257419240|ref|ZP_05596234.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T11] gi|307273284|ref|ZP_07554530.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0855] gi|307278506|ref|ZP_07559580.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0860] gi|307291495|ref|ZP_07571378.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0411] gi|229308952|gb|EEN74939.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1322] gi|255968781|gb|EET99403.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T2] gi|256711525|gb|EEU26563.1| diaminopimelate decarboxylase [Enterococcus faecalis T8] gi|256955677|gb|EEU72309.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis HIP11704] gi|256990631|gb|EEU77933.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis E1Sol] gi|257161068|gb|EEU91028.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T11] gi|306497455|gb|EFM66989.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0411] gi|306504849|gb|EFM74045.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0860] gi|306510269|gb|EFM79293.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0855] gi|315029577|gb|EFT41509.1| diaminopimelate decarboxylase [Enterococcus faecalis TX4000] gi|315144475|gb|EFT88491.1| diaminopimelate decarboxylase [Enterococcus faecalis TX2141] gi|315147212|gb|EFT91228.1| diaminopimelate decarboxylase [Enterococcus faecalis TX4244] gi|315160504|gb|EFU04521.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0645] Length = 436 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 14 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 70 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 130 IGTIVIDNFYEIDLLEELLATRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 189 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 190 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 249 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 250 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 309 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 310 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANREGHDSVKKVTVVGKYCESG 369 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T++ Sbjct: 370 DVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYE 429 Query: 409 ELIELDS 415 ++ LD Sbjct: 430 DMTTLDC 436 >gi|16332032|ref|NP_442760.1| diaminopimelate decarboxylase [Synechocystis sp. PCC 6803] gi|2499348|sp|Q55484|DCDA_SYNY3 RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|1001344|dbj|BAA10831.1| diaminopimelate decarboxylase [Synechocystis sp. PCC 6803] Length = 469 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 119/433 (27%), Positives = 188/433 (43%), Gaps = 21/433 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT---MVCYALKANS 63 G L S+ L +P Y T + + + +F V YA KA S Sbjct: 37 KNGELEIGGCSVPALVEQFGSPLYILDETTLRQAAQQYRQSFQAHYPGSSQVIYASKAWS 96 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVP--------AERIVFSGVGKTIDEIDLAL 115 AV+ A G G D+VS GEL ++A AE+I F G K++ E+ A+ Sbjct: 97 CLAVVAIAAQEGLGFDVVSGGELFTTVSALKQLGWDEAEIAEKIYFHGNNKSVQELQEAI 156 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 V++ EL+TL + A G I R+ P I +TH+ I TG + KFG Sbjct: 157 AINCTII-VDNWLELETLTKLAADSGAPVKIMLRLTPGIECHTHEYIKTGHLDSKFGFDP 215 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 +Q+ +++ Y + P + G+ HIGSQI + + ++L + + G + ++ Sbjct: 216 NQLEAVFTYIAQQPSLHCLGLHAHIGSQIFERQPHKDLGEVLVQWFTKGLTYGLPLTELN 275 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVT 288 +GGGLGI Y PPS ++A K+I EPGR LV + Sbjct: 276 IGGGLGICYTESDDPPSIEEWAQVAAISVAKACDRQNIPYPKLIAEPGRSLVGSACVTAY 335 Query: 289 KVISIKKSADKTFVIL-DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 +V K + I D M+D RP Y + + + N D + + G CE+ Sbjct: 336 RVGGRKVVPNIRTYISVDGGMSDNPRPITYQSVYR-VALANRMNDEITETVTVAGKHCES 394 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 GD + + + PGD++ + TGAY + YN ++VN Q ++I R T+ Sbjct: 395 GDILVKDVALPAAEPGDIMVVAATGAYNHSMASNYNRLGRPAAVLVNQGQANLILQRETY 454 Query: 408 QELIELDSIPAWL 420 +L+ D +P L Sbjct: 455 TDLLRQDCLPNRL 467 >gi|260893164|ref|YP_003239261.1| diaminopimelate decarboxylase [Ammonifex degensii KC4] gi|260865305|gb|ACX52411.1| diaminopimelate decarboxylase [Ammonifex degensii KC4] Length = 435 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 136/425 (32%), Positives = 206/425 (48%), Gaps = 13/425 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L V LA TP Y N + + G YA KA A+ Sbjct: 13 GHLEIGEVDTVHLAREYGTPLYVLDEEVFRANCRRYLCSL-GPGNRAAYAGKALLTLAIC 71 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + G LD+VS GEL A+ A P ER+ F G K++ EI++ L+ G+ F V++ Sbjct: 72 RICQEEGLYLDVVSAGELYTAVKAGFPPERLYFHGNNKSLQEIEMGLELGVGRFVVDNFY 131 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYAYAS 186 EL+ L +RA +LGKK I R+ P I A+TH+ I TG+ + KFG P+ A Sbjct: 132 ELELLEERARALGKKPAILLRLTPGIEAHTHEYIRTGQLDSKFGFPLATGVAEEAVRRAL 191 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGGGLGIAYH 245 + P +++ G+ HIGSQI ++E F +A +++ +R ++ +D+GGGLGI Y Sbjct: 192 SSPHLELVGLHCHIGSQILRLEPFQEAARVMVAFAASIRRKTGWVMEELDLGGGLGIRYT 251 Query: 246 SDHRPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVISIKKSAD 298 ++ PP+ DY I + +I++EPGR +V GI + V +IK+ Sbjct: 252 AEDDPPAIEDYVQAILRAVEEACQEEGLPLPRIVVEPGRSIVGPAGITLYTVGAIKEIPG 311 Query: 299 KTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + +D M D RP LY A +E N + + + G CE+GD + K+ Sbjct: 312 VRTYVAVDGGMADNPRPALYQARYEAVL-ANRMLEPPAVEVAVAGKCCESGDILIPAIKL 370 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 P+PGD+L + TGAY S YN ++V G + +I R T ++LI D +P Sbjct: 371 PRPQPGDILAVFATGAYNYSMSMNYNRLPRPAMVLVRGGEVDLIVARETLEDLISHDRVP 430 Query: 418 AWLQK 422 L K Sbjct: 431 ERLWK 435 >gi|150019596|ref|YP_001311850.1| diaminopimelate decarboxylase [Clostridium beijerinckii NCIMB 8052] gi|149906061|gb|ABR36894.1| diaminopimelate decarboxylase [Clostridium beijerinckii NCIMB 8052] Length = 431 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 128/425 (30%), Positives = 198/425 (46%), Gaps = 14/425 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 K + L +S + L +P Y + I + + F + V +A KA Sbjct: 7 MKVEDNQLMIGGISAKNLVREYGSPLYVFDEDLIREYCRDYRKYFKCEENNNRVAFAGKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + K L LD+VS GEL A + P E+++F G KT+ EI+L ++ G+ Sbjct: 67 FLTLQMCKLLKEENMCLDVVSGGELYTAYKSEFPLEKVMFHGNNKTLSEIELGVRLGVGN 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIH 179 F V++ E+ LN A K I R+ P I A+TH I TG+ + KFG I Sbjct: 127 FVVDNYYEIDALNDIAKEYNKVQNIYLRITPGIEAHTHDYIKTGQIDSKFGFAPVGTVIE 186 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGG 238 A +L + ++G+ HIGSQI +E + A +++ +L + + + G+ I +D GG Sbjct: 187 DAIKKAISLENINLAGIHCHIGSQIFDLEPYEDAVEIMLELVRNTKENLGYLINEVDFGG 246 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVI 291 G GI Y P S+ +Y S I + + +EPGR +VA+ G + V Sbjct: 247 GFGIYYTEGDEPRSTEEYCSTIINKVDEVCARTGQERPILTIEPGRSIVANAGTTLYTVG 306 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 S+K+ +D M D +RP LY+A +E GDR I G CE+GD Sbjct: 307 SVKEIPSVRKYVSVDGGMTDNIRPALYNAEYECILASGVEGDRE-ETVTISGKCCESGDI 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + N KI + GD+L I TGAYG S YN +MV ++ +I R ++ +L Sbjct: 366 LLENIKIPEVKSGDILAIMTTGAYGYSMSSNYNRIPKPAVVMVKDNETRLICKRESYDDL 425 Query: 411 IELDS 415 ++ D Sbjct: 426 LKNDV 430 >gi|311030741|ref|ZP_07708831.1| diaminopimelate decarboxylase [Bacillus sp. m3-13] Length = 441 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 132/423 (31%), Positives = 194/423 (45%), Gaps = 15/423 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 +G L V +LA+ TP Y Y I + F F G+ V YA KA S+ Sbjct: 12 KGHLEIGGVDTIELANDYGTPLYVYDVALIRERSRDFQTTFKNLGVKAQVAYASKAFSSV 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + + G LD+VS GEL AL A P +RI F G K+++E+++A++ I C V+ Sbjct: 72 AMFQLIKEEGLSLDVVSGGELYTALVADFPVDRIHFHGNNKSVEELEMAVEKKIGCVVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YA 183 + EL L G PI RV P INA+TH I TG+++ KFG + + Sbjct: 132 NFLELTLLQDICKKHGYTMPILLRVTPGINAHTHDYILTGQEDSKFGFDLQSGQAHEAMK 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGI 242 AS + + G+ HIGSQI + F A L D ++ G + +++GGG GI Sbjct: 192 IASNATHLDLLGIHCHIGSQIFETTGFKLAAGKLFDTLKEWNEQEGFEARVVNLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y + P +S Y + G +I +EPGR LV D G + V S K+ Sbjct: 252 RYTEEDNPLPASVYVEEIITDVQSFVKDHGLKMPEIWIEPGRSLVGDAGTTIYSVGSKKE 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M D +RP LY A +E N D I G CE+GD + + Sbjct: 312 IPNIRHYLAIDGGMTDNIRPALYQAKYEAVL-ANRVEDEADDKVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + D L + TGAYG + YN + V + ++ R TF++L+ LD Sbjct: 371 LPLPKANHEDYLAVFCTGAYGYAMANNYNRITKPAVVFVEDGEVQLVIRRETFEDLVRLD 430 Query: 415 SIP 417 +P Sbjct: 431 -LP 432 >gi|227518697|ref|ZP_03948746.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0104] gi|227553306|ref|ZP_03983355.1| diaminopimelate decarboxylase [Enterococcus faecalis HH22] gi|227073877|gb|EEI11840.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0104] gi|227177561|gb|EEI58533.1| diaminopimelate decarboxylase [Enterococcus faecalis HH22] gi|315575921|gb|EFU88112.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0309B] gi|315580574|gb|EFU92765.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0309A] Length = 436 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 116/428 (27%), Positives = 185/428 (43%), Gaps = 18/428 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 14 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 70 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 130 IGTIVIDNFYEIDLLEELLATRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 189 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 190 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 249 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 250 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 309 Query: 289 KVISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 V + K+ +D M D +RP LY A ++ D + +VG CE+ Sbjct: 310 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANRDGHDSVKE-VTVVGKYCES 368 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 GD + + + + GDLL I TGAYG + YN + V Q ++ R T+ Sbjct: 369 GDVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETY 428 Query: 408 QELIELDS 415 +++ LD Sbjct: 429 EDMTTLDC 436 >gi|29376071|ref|NP_815225.1| diaminopimelate decarboxylase [Enterococcus faecalis V583] gi|29343533|gb|AAO81295.1| diaminopimelate decarboxylase [Enterococcus faecalis V583] Length = 430 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 116/428 (27%), Positives = 185/428 (43%), Gaps = 18/428 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 8 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 63 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 64 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 123 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 124 IGTIVIDNFYEIDLLEELLATRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 183 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 184 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 243 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 244 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 303 Query: 289 KVISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 V + K+ +D M D +RP LY A ++ D + +VG CE+ Sbjct: 304 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANRDGHDSVKE-VTVVGKYCES 362 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 GD + + + + GDLL I TGAYG + YN + V Q ++ R T+ Sbjct: 363 GDVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETY 422 Query: 408 QELIELDS 415 +++ LD Sbjct: 423 EDMTTLDC 430 >gi|21223714|ref|NP_629493.1| diaminopimelate decarboxylase [Streptomyces coelicolor A3(2)] gi|13276798|emb|CAC33917.1| diaminopimelate decarboxylase [Streptomyces coelicolor A3(2)] Length = 463 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 120/419 (28%), Positives = 193/419 (46%), Gaps = 12/419 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + + + +LA TP Y + + AF G D V YA KA ++AV Sbjct: 45 DGVVTVGGIPVTQLAEEYGTPAYLLDEADFRERARAWRTAF-GDDADVFYAGKAFLSRAV 103 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ L G LD+ S GEL AL+A +PAERI F G K+ +EI+ A+++G+ ++S Sbjct: 104 VRWLDEEGLNLDVCSGGELATALSAGMPAERIAFHGNNKSPEEIERAVRAGVGRIVLDSF 163 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYA 185 E+ + A SLGK+ + R+ + A+TH+ I+T ++ KFGIP+ A Sbjct: 164 QEIVRVAHIAQSLGKRQRVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRA 223 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L G+++ G+ HIGSQI + F A + L + +R + ID+GGGLGIAY Sbjct: 224 LKLDGLEVIGIHSHIGSQIFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAY 283 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 SD P + A + + +I +EPGR +V + +V ++K Sbjct: 284 TSDDDPREPHEIAKALTEIVTRECEAARLATPRISVEPGRAIVGPTAFTLYEVGTVKPLE 343 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T + + D + +VG CE+GD + + + Sbjct: 344 GLRTYVSVDGGMSDNIRTALYDAEYSVALASRTSDAEPMLVRVVGKHCESGDIVVKDAFL 403 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDL+ + TGAY + YN L P + V ++ R T ++L+ LD Sbjct: 404 PGDLAPGDLIAVPATGAYCRSMASNYNHALRPPVVAVRDGAARVVVRRETEEDLLRLDV 462 >gi|290892112|ref|ZP_06555108.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J2-071] gi|290558235|gb|EFD91753.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J2-071] Length = 436 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 129/421 (30%), Positives = 194/421 (46%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KL TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLTEKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+ +EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 134 NYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 193 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + G + + +++GGG G Sbjct: 194 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P +Y I +I +EPGR LV + G + KV S K Sbjct: 254 VRYTAEDEPLEPGEYVRQIMDEVRDVANSNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRK 313 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + ++ +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 314 EVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIW 372 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN P + V +I R T++ L++ Sbjct: 373 DLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGIDKLIVARETYENLVQN 432 Query: 414 D 414 D Sbjct: 433 D 433 >gi|205372423|ref|ZP_03225236.1| diaminopimelate decarboxylase [Bacillus coahuilensis m4-4] Length = 444 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 118/428 (27%), Positives = 189/428 (44%), Gaps = 16/428 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYA 58 M+ +G L + V+ +L TP Y+ T I +N F FD V YA Sbjct: 10 MN----QQGVLEIDGVTSTELVKQYGTPLMVYNETVIRQNCREFKQTFDQSGLTYQVAYA 65 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA +++ + G LD+VS GEL AL A P ERI F G K+++E+++ + +G Sbjct: 66 GKAFLCMDMVRLVKEEGMSLDVVSGGELYTALQAGFPVERIHFHGNNKSVEELEMGIDAG 125 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I CF V++ EL+ L++ A +K I RV P + A+TH I TG+++ KFG + Sbjct: 126 IGCFVVDNFIELELLHELAAEREQKVNILLRVTPGVEAHTHDYIMTGQEDSKFGFDVGNG 185 Query: 179 HSL--YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHID 235 A P + GV HIGSQI + E F A ++L Q+ + + ++ Sbjct: 186 QGKLGVQLALQKPYFHLLGVHSHIGSQIFETEGFQYAIEVLARFLQEVHEESDVVMSVLN 245 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYF-------GNLQCKIILEPGRFLVADVGILVT 288 VGGG G+ Y + P +Y I + +I +EPGR +VA+ G + Sbjct: 246 VGGGFGVRYTEEDEPLPIREYVKSITEAVKFSFGQLCYPTPEIWVEPGRSIVAEAGTTLY 305 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 K+ + K + + N A + I G CE+G Sbjct: 306 KIGTQKNLPGIRKYVAIDGGMTDNLRPALYKARYDALLANRANEERTEVVSIAGKACESG 365 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + R GD L + TGAYG + YN + V + ++ R +++ Sbjct: 366 DMLIWDIALPPVRMGDTLAVFSTGAYGYSMANNYNRTPRPAVVFVKEGESRLVIRRESYR 425 Query: 409 ELIELDSI 416 +L+ D + Sbjct: 426 DLVRNDVL 433 >gi|16801132|ref|NP_471400.1| hypothetical protein lin2066 [Listeria innocua Clip11262] gi|16414567|emb|CAC97296.1| lysA [Listeria innocua Clip11262] gi|313618118|gb|EFR90219.1| diaminopimelate decarboxylase [Listeria innocua FSL S4-378] Length = 436 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 130/421 (30%), Positives = 196/421 (46%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KL TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLTEKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+ +EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 134 NYYEISLLEDILIERNEKAAVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 193 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + + G + + +++GGG G Sbjct: 194 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHGTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P S+Y I +I +EPGR LV + G + KV S K Sbjct: 254 VRYTAEDEPLEPSEYVRQIMDEVRDVANSNDIAIPEIWIEPGRSLVGEAGTTLYKVGSRK 313 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + ++ +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 314 EVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIW 372 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN P + V +I R T++ L++ Sbjct: 373 DLPLPKSDAGEILAVFCTGAYGYAMASNYNRIPRPPVVFVENGMDKLIVARETYENLVQN 432 Query: 414 D 414 D Sbjct: 433 D 433 >gi|116873394|ref|YP_850175.1| diaminopimelate decarboxylase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742272|emb|CAK21396.1| diaminopimelate decarboxylase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 436 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 130/421 (30%), Positives = 200/421 (47%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KL TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLTEKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+++EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELYTAIKADFPPERIHFHGNNKSVEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 134 NYYEIDLLENILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 193 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + + G + + +++GGG G Sbjct: 194 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHGTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P S+Y I + ++ +I +EPGR LV + G + KV S K Sbjct: 254 VRYTAEDEPLEPSEYVRQIMEEVRDVANSNAIAIPEIWIEPGRSLVGEAGTTLYKVGSRK 313 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + ++ +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 314 EVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIW 372 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN P + V +I R T++ L++ Sbjct: 373 DLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQN 432 Query: 414 D 414 D Sbjct: 433 D 433 >gi|167769427|ref|ZP_02441480.1| hypothetical protein ANACOL_00757 [Anaerotruncus colihominis DSM 17241] gi|167668395|gb|EDS12525.1| hypothetical protein ANACOL_00757 [Anaerotruncus colihominis DSM 17241] Length = 435 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 130/420 (30%), Positives = 197/420 (46%), Gaps = 15/420 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 G L LA TP Y I + ++ + + +V YA KA + Sbjct: 15 GHLTIGGCDTVALAQKYGTPLYVMDEDEIRRACASYRGSIERYYGGRGLVTYASKAFCCK 74 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A K A G GLD+VS GEL A++A PAERI F G KT+ E+ AL G+ V+ Sbjct: 75 AACKIAAEEGLGLDVVSGGELYTAISANFPAERIFFHGNNKTVQELTEALAYGVGQIVVD 134 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + EL+TLNQ A+S G+ A I FR+ P I+A+TH + TG+ + KFG+ + ++ A Sbjct: 135 NFDELETLNQLALSRGEPANILFRIKPGIDAHTHDFVRTGQIDSKFGLALETGEAMRAVQ 194 Query: 186 STLPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGGGLGI 242 + L ++ GV HIGSQI IE F A +++ +R + +D+GGG GI Sbjct: 195 TALSMQGVRLRGVHCHIGSQIFDIEPFEHAAEVMLGFIADVRDQTGCELEILDLGGGFGI 254 Query: 243 AYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKK 295 Y +H P Y + + I++EPGR + G+ + ++K+ Sbjct: 255 KYLPEHDPVEYDRYMQRVARTVQRVSAARGVKTPFIVIEPGRSIAGPAGVTLYTAGAVKE 314 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D R LY + +E + N A + G CE+GD I Sbjct: 315 IPGVRTYVSIDGGMCDNPRYILYRSEYE-AMVANKASQPKTRTVTLAGKCCESGDLIGEG 373 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 +I PGD++ + TGAY S YN P +M+ G Q ++ R T+++L+ D Sbjct: 374 MQIQDVHPGDIIAVLATGAYNYAMSSNYNRIPRPPVVMLRGGQARVVVKRETYEDLVRND 433 >gi|225156512|ref|ZP_03724846.1| diaminopimelate decarboxylase [Opitutaceae bacterium TAV2] gi|224802840|gb|EEG21088.1| diaminopimelate decarboxylase [Opitutaceae bacterium TAV2] Length = 499 Score = 270 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 171/457 (37%), Positives = 251/457 (54%), Gaps = 37/457 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y LH E+V+L +A + TP Y YS + NY + + G+D +CYA+K Sbjct: 44 MHHFHYNGNHLHCESVNLADVARLYGTPTYVYSAATMTDNYTRLARSLGGLDLQICYAMK 103 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANS+ A+++ A+LG+ D+VS GE+RR LAA +R VF+GVGKT EI LAL++GI+ Sbjct: 104 ANSSLAILRHFANLGAAFDLVSGGEIRRVLAAGADVKRSVFAGVGKTEAEIKLALENGIF 163 Query: 121 CFNVESESELKTLNQR------AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 F+VESE E+ +N + + KAPIA R+NPD++A+TH KI+TGK ++KFGIP Sbjct: 164 AFHVESEPEIARINHVAGKLLSSGRITGKAPIAIRINPDVDAHTHAKITTGKADNKFGIP 223 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + Y A+ P ++I GV MHIGSQ+ ++ F +A + L++ Sbjct: 224 LKHAAAAYETAARYPHIEIKGVQMHIGSQLTSVKPFVEAVAKVAPFVADLKTRYGITYFS 283 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYF--------------------------GNLQ 268 GG I + + A Q Sbjct: 284 IGGGIGIIYKDALASGAKAWWDAQPADQRPLTPEAYGAALTPLLQPLASATGGGGGTGTG 343 Query: 269 CKIILEPGRFLVADVGILVTKVIS----IKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 KI+LEPGRFLV + G+L+T+V ++ DK+F+++D AMND +RP +YD+YHEI Sbjct: 344 LKILLEPGRFLVGNAGVLLTRVEYLKRGHDRARDKSFLVVDAAMNDLVRPAMYDSYHEIL 403 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 + R + AD+VGPICE+GD A +R + G+ L GAYG +G YNS Sbjct: 404 PLQRDTA-RPALVADVVGPICESGDCFAKDRSLQELGEGEHLAFMSAGAYGYTMAGRYNS 462 Query: 385 RLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQ 421 R + E++VN F +I R TF++ I +SIPA+L+ Sbjct: 463 RPMAAEVLVNQGTFELINARETFEQQIAGESIPAFLK 499 >gi|257089826|ref|ZP_05584187.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis CH188] gi|312903248|ref|ZP_07762428.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0635] gi|256998638|gb|EEU85158.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis CH188] gi|310633124|gb|EFQ16407.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0635] gi|315577593|gb|EFU89784.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0630] Length = 436 Score = 270 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 14 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 70 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 130 IGTIVIDNFYEIDLLEELLATRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 189 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 190 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 249 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 250 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 309 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 310 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANREGYDSVKKVTVVGKYCESG 369 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T++ Sbjct: 370 DVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYE 429 Query: 409 ELIELDS 415 ++ LD Sbjct: 430 DMTTLDC 436 >gi|317122541|ref|YP_004102544.1| diaminopimelate decarboxylase [Thermaerobacter marianensis DSM 12885] gi|315592521|gb|ADU51817.1| diaminopimelate decarboxylase [Thermaerobacter marianensis DSM 12885] Length = 445 Score = 270 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 127/426 (29%), Positives = 200/426 (46%), Gaps = 13/426 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L L TP Y AI + + +A + YA KA A++ Sbjct: 21 GHLVIGGADALDLVERFGTPLYVLDEVAIRQRCRAYRDAMGDAGV-IAYAAKALCTTAIL 79 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G +D VS GEL ALAA PA R++ G K+ +E+ LA+++G+ +++ Sbjct: 80 RIMDQEGLWMDAVSGGELHTALAAGFPAGRVLLHGNNKSDEELRLAIETGVGRVVIDNFY 139 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 EL+ L A + G+K P+ RV P + A+TH+ I TG++E KFG + +L A L Sbjct: 140 ELERLAAMARAAGRKVPVLLRVAPGVEAHTHEFIRTGQQESKFGFDLATGQALAALERVL 199 Query: 189 PGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYH 245 G HIGSQI +E + +A +++ DL + R G ++ +D+GGGLGI Y Sbjct: 200 DEPALDWYGFHCHIGSQILAVEPWEQAARIMMDLAAEAHRRTGRVMRELDLGGGLGIRYL 259 Query: 246 SDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSAD 298 PPS ++ I ++ILEPGR +V + G+ + V ++K+ Sbjct: 260 PQDEPPSIAETVGRIRAAVAAAAEERGLPVPRLILEPGRSIVGEAGVTLYTVGAVKRVPG 319 Query: 299 -KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 +V +D M D R LY A + + N D +VG CE+GD + + Sbjct: 320 LAPYVAVDGGMADNPRYALYRALY-TAVLANRPLDEPAERVCLVGRYCESGDILIPQIDL 378 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 PGD++ + TGAY S YN ++V + +I R T+ +L+ D IP Sbjct: 379 PRVEPGDVVAVFSTGAYNYSMSSQYNRFPRPAMVLVRDGEAEVIVERETYDDLLRHDRIP 438 Query: 418 AWLQKT 423 L + Sbjct: 439 PSLARE 444 >gi|172036266|ref|YP_001802767.1| diaminopimelate decarboxylase [Cyanothece sp. ATCC 51142] gi|171697720|gb|ACB50701.1| diaminopimelate decarboxylase [Cyanothece sp. ATCC 51142] Length = 476 Score = 270 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 113/431 (26%), Positives = 183/431 (42%), Gaps = 20/431 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSNQ 65 L L+ L +P Y + + + F ++ V YA KA S Sbjct: 45 DHLEIGGCDLQTLVEQFGSPLYILDEMTLRTACRQYRDNFQTYYKGESQVIYASKAWSCL 104 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVP--------AERIVFSGVGKTIDEIDLALQS 117 AV+ +A G D+VS GEL A A++I F G K+ E+ A++ Sbjct: 105 AVVGVIARENLGFDVVSGGELYTTQKALTQLGYSCQEIAKKIYFHGNNKSEAELKEAIKV 164 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G + PI R+ P I +TH+ I TG + KFG +Q Sbjct: 165 GCTIIVDNWLELQTLAQLGNDTPNLTIPILIRLTPGIECHTHEYIRTGHLDSKFGFDPNQ 224 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + +++ Y S + G+ HIGSQI + + +L + + R G N+ +++G Sbjct: 225 LEAVFTYISQQTSLDCRGLHAHIGSQIFERQPHQDLAGVLVEWLKIGREYGLNLSELNIG 284 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKV 290 GGLGI Y + PPS ++ + + + I EPGR L+ + V Sbjct: 285 GGLGICYTEEDDPPSIEEWVKAVSEAVMKACQRCEIDLPKLIAEPGRSLIGSACVTAYTV 344 Query: 291 ISIKKSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 S K+ + +T++ +D M+D RP Y + + + N + I G CE+GD Sbjct: 345 GSRKEIPELRTYIAVDGGMSDNPRPITYQSLYR-VALANRMSAEISETVTIAGKHCESGD 403 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + ++ PGD+L I TGAY + YN +MVN + ++I R T+ + Sbjct: 404 IVIKDAQLPQTHPGDILVIMGTGAYNYSMASNYNRLPRPAAVMVNQGEANLIVRRETYDD 463 Query: 410 LIELDSIPAWL 420 LI D +P L Sbjct: 464 LIRQDCLPQRL 474 >gi|332706085|ref|ZP_08426157.1| diaminopimelate decarboxylase [Lyngbya majuscula 3L] gi|332355177|gb|EGJ34645.1| diaminopimelate decarboxylase [Lyngbya majuscula 3L] Length = 473 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 112/426 (26%), Positives = 174/426 (40%), Gaps = 16/426 (3%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQAV 67 L + L +P Y + AF +++V YA KA + A+ Sbjct: 51 LEIGGCDVTTLVEQFGSPLYIVDEVTFRTACHQYREAFANYYPGESLVLYASKAWNCLAI 110 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 G+D+VS GEL AL A V A+++ F G K+ E++LA + Sbjct: 111 CAIANSESLGIDVVSGGELYTALQAGVSADKLYFHGNNKSTSELELATEICCTIVVDNWL 170 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 L A + I R+ P I +TH I TG + KFG ++ + S Sbjct: 171 E----LKALASLPQENIRIMIRLTPGIECHTHDYIRTGHLDSKFGFDPDTWDQVFTFISQ 226 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 P + G+ HIGSQI + + K+L + + +Q I+VGGGLGI Y Sbjct: 227 HPTLNFVGLHAHIGSQIFERQPHQDLAKVLVECIVKAADYDLPVQEINVGGGLGICYLES 286 Query: 248 HRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADKT 300 PPS D+ + K++ EPGR +V + + S K + Sbjct: 287 DDPPSIDDWVKGVCDSVVAACTSRQLVLPKLLSEPGRSIVGPACVTAYTLGSSKVIPEIR 346 Query: 301 FV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 +D M+D RP Y + + N L I G CE+GD + + + Sbjct: 347 TYLTVDGGMSDNPRPITYQSVYRSVV-ANRMSAPLTEKITIAGKHCESGDILIKDATLPQ 405 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 +PGD+L + TGAY + YN ++V + +I R T+Q+LI LD +P Sbjct: 406 TQPGDILVVMATGAYNYSMASNYNRLPRPAAVLVKDGEAQVIVQRETYQDLIRLDRLPER 465 Query: 420 LQKTPK 425 L+ + Sbjct: 466 LRPRAE 471 >gi|298492876|ref|YP_003723053.1| diaminopimelate decarboxylase ['Nostoc azollae' 0708] gi|298234794|gb|ADI65930.1| diaminopimelate decarboxylase ['Nostoc azollae' 0708] Length = 463 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 114/426 (26%), Positives = 185/426 (43%), Gaps = 14/426 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANS 63 SL + L +P Y + + + F ++ V YA KA + Sbjct: 41 RHDSLEIGGCDVTTLVEQFGSPLYILDEETLRTACRQYHDTFKQHYKDESQVLYASKAWN 100 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 AV +A G G+D+VS GEL AL A V ++I G K+ DE+ LA++SG Sbjct: 101 CLAVCAIVASEGLGIDVVSGGELYTALNAGVTPDKIYLHGNNKSRDELVLAIESGCTIVA 160 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 + V+ I R+ P I +TH+ I TG + KFG + ++A Sbjct: 161 DNWYELKTLVE--LVTKSSPVRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPSDLDEVFA 218 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + S P + G+ HIGSQI + + ++ + ++ ++VGGGLGI Sbjct: 219 FVSKQPSLNCVGLHAHIGSQIFERQPHRDLAAVMVQWLRDAAKYNLELKELNVGGGLGIK 278 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y PPS +++ I + K++ EPGR L+A + + S K Sbjct: 279 YTESDDPPSIEEWSKAICEVVQQACAAENLPLPKLLCEPGRSLIATACVTAYSIGSAKVI 338 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 D +T+V +D M+D RP Y + + N L + G CE+GD + N Sbjct: 339 PDLRTYVTIDGGMSDNPRPITYQSVYRSVV-ANKMSAALTETVTLAGKHCESGDILIKNA 397 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ PGD+L + TGAY + YN ++V + ++I R +Q++I D Sbjct: 398 QLPKTEPGDILVVMGTGAYNYSMASNYNRLPRPAAVLVANGEANLILQRENYQDIIRQDC 457 Query: 416 IPAWLQ 421 +P L+ Sbjct: 458 LPERLK 463 >gi|332529506|ref|ZP_08405464.1| diaminopimelate decarboxylase [Hylemonella gracilis ATCC 19624] gi|332041026|gb|EGI77394.1| diaminopimelate decarboxylase [Hylemonella gracilis ATCC 19624] Length = 440 Score = 269 bits (688), Expect = 6e-70, Method: Composition-based stats. Identities = 169/430 (39%), Positives = 243/430 (56%), Gaps = 17/430 (3%) Query: 3 AFKYF----EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM----DTM 54 Y LH E V L LA TP + YS A+ + Sbjct: 11 HLAYRATATGQDLHLEGVRLADLARTHGTPLFVYSQQAMLDALAAYQRGLASRLAQGKAR 70 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 +CYALKANS+ A+++ A G G DIVS GEL R LAA R++FSGVGKT E+ A Sbjct: 71 ICYALKANSSLAILQLFARAGCGFDIVSGGELERVLAAGGDPARVIFSGVGKTRAEMRQA 130 Query: 115 ----LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 +GI CFNVESE+EL LN+ A +LGK AP++ RVNPD++A TH ISTG K +K Sbjct: 131 LNAGQGAGIGCFNVESEAELDVLNEVATALGKVAPVSIRVNPDVDAKTHPYISTGLKGNK 190 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 FGI + ++Y +A+ LPG+K+ G+D HIGSQI + + A + + DL + + + G Sbjct: 191 FGIAHERAVAVYQHAARLPGLKVVGIDCHIGSQITEERPYLDALERVLDLVEAIEAAGIP 250 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVT 288 + HID+GGGLGI YH D P + + + L+ + G+ I +EPGR LV + G+ +T Sbjct: 251 LHHIDLGGGLGIDYHGDTPPAADALWHKLLARVDARGHADKAIFIEPGRSLVGNAGVCLT 310 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY--IVNPAGDRLHIHADIVGPICE 346 +V+ +K K F I+D AMND RP +Y+AYH+I PA ++ ++VGPICE Sbjct: 311 EVLYLKPGEQKNFCIVDAAMNDLPRPAMYEAYHQIVPLAPREPAQAGGAVNYEVVGPICE 370 Query: 347 TGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 +GD++ +R ++ + GD L + GAY + YN+R E++V G Q +IR R + Sbjct: 371 SGDWLGHDRALS-VQAGDQLAVLSAGAYCMSMASNYNTRGRAAEVLVQGDQAILIRQRES 429 Query: 407 FQELIELDSI 416 + D + Sbjct: 430 AADSFRHDIL 439 >gi|17230489|ref|NP_487037.1| diaminopimelate decarboxylase [Nostoc sp. PCC 7120] gi|17132091|dbj|BAB74696.1| diaminopimelate decarboxylase [Nostoc sp. PCC 7120] Length = 464 Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats. Identities = 114/425 (26%), Positives = 182/425 (42%), Gaps = 14/425 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 +G+L + L +P Y + + + F ++ V YA KA + Sbjct: 43 QGNLEIGGCDVTTLVEQFGSPLYILDEETLRTACQQYRDGFQKYYPGESQVLYASKAWNC 102 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 AV A G G+D+VS GEL ALAA V +I G K+ +E+ LA++SG+ Sbjct: 103 LAVCAIAASEGLGIDVVSGGELYTALAAGVSPAKIYLHGNNKSREELVLAIESGVTIVAD 162 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 + + + R+ P I +TH+ I TG + KFG + + ++ + Sbjct: 163 NWYE--LRILASLADSEEPIRLMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLAEVFEF 220 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 S P + G+ HIGSQI + + ++ + G N+ ++VGGGLGI Y Sbjct: 221 VSQQPNLNCVGLHAHIGSQIFERQPHRDLAAVMVQWLRDANKYGLNVTELNVGGGLGIKY 280 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 PPS ++ I + K++ EPGR L+A I V S K Sbjct: 281 VESDDPPSIDEWVKAICEVVQAACAAENLPLPKLLSEPGRSLIATSCITAYTVGSSKTIP 340 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + +D M+D RP Y + + N I G CE+GD + N + Sbjct: 341 EIRTYVSIDGGMSDNPRPITYQSVYRAVI-ANKLSAPHTETVTIAGKHCESGDILIKNAQ 399 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + PGD+L + TGAY + YN ++V + ++I R T+Q+LI D + Sbjct: 400 LPKTEPGDILVVMATGAYNYSMASNYNRLPRPAAVVVANGEANLILQRETYQDLIRQDCL 459 Query: 417 PAWLQ 421 P L+ Sbjct: 460 PERLK 464 >gi|261405994|ref|YP_003242235.1| diaminopimelate decarboxylase [Paenibacillus sp. Y412MC10] gi|261282457|gb|ACX64428.1| diaminopimelate decarboxylase [Paenibacillus sp. Y412MC10] Length = 444 Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats. Identities = 131/433 (30%), Positives = 195/433 (45%), Gaps = 14/433 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 +G L L TP Y ++ + AF G+ V YA KA Sbjct: 12 QGHLEIGGCDTSDLKAQYGTPLYIVDEQSVRNRCREYIEAFKASGLKFQVAYASKAFCVM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + G LD+VS+GEL AL A PA+RI F G KT +EI++AL + I CF V+ Sbjct: 72 AMCRLADEEGMSLDVVSDGELYTALQAGFPADRIHFHGNNKTPEEIEMALDAEIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL L A +K I RV P + A+TH+ ISTG+ + KFG I + A Sbjct: 132 NVIELHMLQAIAAEKNRKVNILLRVTPGVEAHTHEYISTGQTDSKFGFDIGNGSAYEAVQ 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGI 242 A + + G+ HIGSQI ++E F A + + + ++ G + +++GGG GI Sbjct: 192 LAEAQANIHLMGIHSHIGSQIFEVEGFQMAVQRVAEFAASVKEGLGVVFKVVNLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKK 295 Y P S Y I N +I +EPGR +V D G + V + K Sbjct: 252 RYVDGDTPLQVSQYVKAITDAVKNHFAGLGSELPEIWVEPGRSIVGDAGTTLYTVGTSKD 311 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M D RP LY++ +E N A + I G CE+GD + + Sbjct: 312 IPGVRKYVAVDGGMTDNPRPALYESKYEALL-ANRAKEEPEETVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ GDLL + TGAY + YN + V Q +++ R + ++I D Sbjct: 371 LELPKVETGDLLAVSCTGAYNYSMASNYNRIRKPAVVFVKDGQSNLVVRRESLADIISND 430 Query: 415 SIPAWLQKTPKQS 427 +PA + K S Sbjct: 431 VVPAGVTKETVTS 443 >gi|15614107|ref|NP_242410.1| diaminopimelate decarboxylase [Bacillus halodurans C-125] gi|13431434|sp|Q9KCM5|DCDA_BACHD RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|10174161|dbj|BAB05263.1| diaminopimelate decarboxylase [Bacillus halodurans C-125] Length = 439 Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats. Identities = 125/420 (29%), Positives = 192/420 (45%), Gaps = 14/420 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQ 65 +G L V +LA++ TP + Y I + F AF +G+ V YA KA S Sbjct: 12 KGHLEIGGVDTVELANLYGTPLFVYDVALIRERAKDFKQAFADEGVQAQVAYASKAFSCI 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + LG LD+VS GEL A A V ERI F G K+ EI++A+++GI CF V+ Sbjct: 72 AMFQLAEELGLSLDVVSGGELYTAQQAGVSMERIHFHGNNKSRAEIEMAVEAGIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YA 183 + EL L A I R+ P + A+TH ISTG+++ KFG + + Sbjct: 132 NFYELDLLADICEQKRATANILLRITPGVEAHTHDYISTGQEDSKFGFDLVSGQATLAVK 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGI 242 A + + + GV HIGSQI + F A + + + R + +++GGG GI Sbjct: 192 KALAVDSIHLLGVHSHIGSQIFETTGFVMAVEKIFEHLVTWREDHGFEPSVLNLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P DY + + +I +EPGR LV D G + + S K+ Sbjct: 252 RYIEGDTPRPVGDYVKEMIRAVKQQIAEHEMSMPEIWIEPGRSLVGDAGTTLYTIGSRKE 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +RP LY A +E N ++ + G CE+GD + + Sbjct: 312 IPNVRHYLSVDGGMSDNLRPALYQAEYEGAL-ANRVNEQPVGMFSVAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + D+L + TGAYG + YN P + V ++ R +++L+ LD Sbjct: 371 LPLPEANHEDILAVFCTGAYGYSMANNYNRIPRPPVVFVEDGDAQLVIQRERYEDLVRLD 430 >gi|294339197|emb|CAZ87551.1| Diaminopimelate decarboxylase (DAP decarboxylase ) [Thiomonas sp. 3As] Length = 430 Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats. Identities = 170/418 (40%), Positives = 243/418 (58%), Gaps = 7/418 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--CYALK 60 Y +L E V+ +A TP Y YS +IE+ +S A V YA+K Sbjct: 14 HIDYVGSTLKIEQVTASAVAAEFGTPTYVYSRASIEEAAQRYSQAAQASSVHVALRYAVK 73 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV++ LA LG G DIVS GEL+R LAA A ++VFSGVGK+ D++ AL G+ Sbjct: 74 ANSNLAVLQLLARLGWGFDIVSAGELKRVLAAGGEAGKVVFSGVGKSADDMRFALDVGVE 133 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SEL LN+ A + GK A +A RVNPD++A TH ISTG K +KFGI Q Sbjct: 134 CFNVESPSELAALNRVAQAAGKVARVALRVNPDVDAGTHPYISTGLKTNKFGISQDQAAQ 193 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L + L V++ G+ HIGSQI +E + A + DL +Q+ G I+HID+GGGL Sbjct: 194 LALQTAQLEQVQLVGIACHIGSQITTVEPYLDALDKVLDLVEQMEHKGAKIEHIDLGGGL 253 Query: 241 GIAYHSDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 GI Y + P + L+ + G +++EPGR +V + G+L+T+ + +K + Sbjct: 254 GIRYTDETPPTPQEWLSPLLARISARGFGHRTVVIEPGRSIVGNAGVLLTRTLFLKSTPV 313 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K F ++D MND +RP LY A E ++ + + DIVGP+CE+ D++A +R + Sbjct: 314 KHFAVVDAGMNDLIRPALYSA--EQAVVLAEQREGSALKYDIVGPVCESADWLARDRAL- 370 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL I +GAYG V + YNSR E+M++G+ +IRPR T ++L + + Sbjct: 371 VLEEGDLLAILSSGAYGMVMASNYNSRGRPAEVMIDGATATLIRPRETPEQLYASERL 428 >gi|282861110|ref|ZP_06270175.1| diaminopimelate decarboxylase [Streptomyces sp. ACTE] gi|282563768|gb|EFB69305.1| diaminopimelate decarboxylase [Streptomyces sp. ACTE] Length = 463 Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats. Identities = 124/419 (29%), Positives = 193/419 (46%), Gaps = 12/419 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G+L + + +LA TP Y + +++AF G D V YA KA ++AV Sbjct: 45 NGALTVGGIEVARLAEEFGTPAYILDESDFRARCRAWADAF-GADADVFYAGKAFLSRAV 103 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ L G LD+ S GEL AL A +P ERI F G KT EI+ A+ +G+ ++S Sbjct: 104 VRWLTEEGLNLDVCSGGELATALDAGMPVERIAFHGNNKTAAEIERAVSAGVGRIVLDSF 163 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYA 185 E+ + A SLGK+ + RV + A+TH+ I+T ++ KFGI + A Sbjct: 164 QEIVRVAHIAQSLGKRQRVQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRRA 223 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 TL G+++ G+ HIGSQI + F + + + L ++R + ID+GGGLGIAY Sbjct: 224 LTLDGLELIGIHSHIGSQIFDMAGFEVSARRVVQLLAEIRDEHGVELPEIDLGGGLGIAY 283 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 S+ P + A + +I +EPGR +V + +V +IK Sbjct: 284 TSEDDPREPHEIAKALGDIVTRECESAGLATPRISVEPGRAVVGPTAFTLYEVGTIKPLE 343 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T +V+ D + +VG CE+GD + + + Sbjct: 344 GLRTYVSVDGGMSDNIRTALYDAEYSVSLVSRTSDAEPMLVRVVGKHCESGDIVVKDAFL 403 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDL+ + TGAY + YN L P + V Q +I R T ++L+ LD Sbjct: 404 PADLAPGDLIAVPATGAYCRSMASNYNHALRPPVVAVRDGQARVIVRRETEEDLLRLDV 462 >gi|182435976|ref|YP_001823695.1| putative diaminopimelate decarboxylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776601|ref|ZP_08235866.1| diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1] gi|178464492|dbj|BAG19012.1| putative diaminopimelate decarboxylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656934|gb|EGE41780.1| diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1] Length = 463 Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats. Identities = 122/419 (29%), Positives = 194/419 (46%), Gaps = 12/419 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G+L +++ +LA TP Y + +S+AF G D V YA KA ++AV Sbjct: 45 DGALTVGGMTVARLAEEFGTPAYFLDESDFRARCRAWSDAF-GPDADVFYAGKAFLSRAV 103 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ L G LD+ S GEL AL A +PAERI F G KT+ EI+ A+++G+ ++S Sbjct: 104 VRWLKEEGLNLDVCSGGELTTALDAGMPAERIAFHGNNKTVAEIERAVEAGVGRIVLDSF 163 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYA 185 E+ + A G + + RV + A+TH+ I+T ++ KFGI + A Sbjct: 164 QEIVRVAHIAQRHGVRQRVQIRVTVGVEAHTHEFIATAHEDQKFGIALADGQAAEAVRRA 223 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 +L G+ + GV HIGSQI + F + + + L ++R + ID+GGGLGIAY Sbjct: 224 LSLDGLDLIGVHSHIGSQIFDMAGFEVSARRVVQLLAEIRDEHGVELPEIDLGGGLGIAY 283 Query: 245 HSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 S+ P + A + +I +EPGR +V + +V +IK Sbjct: 284 TSEDDPREPHEIAKALSDIVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLE 343 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T +V+ D + +VG CE+GD + + + Sbjct: 344 GLRTYVSVDGGMSDNIRTALYDAEYSVALVSRTSDAEPMLVRVVGKHCESGDIVVKDAFL 403 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDL+ + TGAY + YN L P + V + +I R T ++L+ LD Sbjct: 404 PADLAPGDLIAVPATGAYCRSMASNYNHALRPPVVAVRDGEARVIVRRETEEDLLRLDV 462 >gi|71083118|ref|YP_265837.1| diaminopimelate decarboxylase [Candidatus Pelagibacter ubique HTCC1062] gi|71062231|gb|AAZ21234.1| Diaminopimelate decarboxylase [Candidatus Pelagibacter ubique HTCC1062] Length = 404 Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats. Identities = 149/408 (36%), Positives = 232/408 (56%), Gaps = 4/408 (0%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 KY + +L E V+++K+A TP YCYS + +N F F ++C+A+K+N+ Sbjct: 1 MKYIKKNLTIEKVNVQKIAKKFGTPTYCYSHKRLTENIKNFKKNFSSFSPLICFAVKSNT 60 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N +I+ + LG G D+VS GEL AL A + ++IVFSGVGKT EI A+ I N Sbjct: 61 NVNLIREIRKLGLGADVVSMGELMMALKAGIDPKKIVFSGVGKTSKEISYAIDKKILLIN 120 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 ES+SE+ + + A S K I R+NP+ +A T K+ISTGKKE+KFG+ L Sbjct: 121 AESKSEIIEIEKIAKSKKKIVNIGIRLNPNTDAKTLKQISTGKKENKFGVDEKTFFELVN 180 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + + + + + +HIGSQI + + K+L + + ++ +GH + ID+GGG+GI+ Sbjct: 181 FTNHSKNINLKCLSVHIGSQILDHKPYE---KMLSVVNKIIKKSGHIFEFIDLGGGMGIS 237 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 Y + + + Y + I ++ + KII EPGR +V ++G L+++VI IK++ K F+I Sbjct: 238 YEKNSKKLNYQKYNTAIQKFLKGQKTKIIFEPGRSIVGNIGFLISQVIYIKENTKKDFII 297 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 LD AMND MRP LY A H+ +V + + VGPICE+ D + + Sbjct: 298 LDAAMNDLMRPALYGANHQTIPVVK-NNRISNKTYEFVGPICESTDKFTTIKGFQKLKEK 356 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 DL+ + GAYG S YN R E+++ GS+ +II+ R ++LI Sbjct: 357 DLVLMCDVGAYGMSLSSNYNVRPKPAELIIKGSKINIIKKRQKLKDLI 404 >gi|75907135|ref|YP_321431.1| diaminopimelate decarboxylase [Anabaena variabilis ATCC 29413] gi|75700860|gb|ABA20536.1| diaminopimelate decarboxylase [Anabaena variabilis ATCC 29413] Length = 464 Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats. Identities = 113/425 (26%), Positives = 181/425 (42%), Gaps = 14/425 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 +G+L + L +P Y + + + F ++ V YA KA + Sbjct: 43 QGNLEIGGCDVTTLVEQFGSPLYILDEETLRTACQQYRDGFQKYYPGESQVLYASKAWNC 102 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 AV G G+D+VS GEL ALAA V +I G K+ +E+ LA++SG+ Sbjct: 103 LAVCAIAGSEGLGIDVVSGGELYTALAAGVSPAKIYLHGNNKSREELILAIESGVTIVAD 162 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 + I R+ P I +TH+ I TG + KFG + + ++ + Sbjct: 163 NWYE--LRTLASLTHTDQPVRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLAEVFEF 220 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 S P + G+ HIGSQI + + ++ + G N+ ++VGGGLGI Y Sbjct: 221 VSQQPNLNCVGLHAHIGSQIFERQPHRDLAAVMVQWLRDANKYGLNVTELNVGGGLGIKY 280 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 PPS ++ I + + K++ EPGR L+A + V S K Sbjct: 281 VESDDPPSIDEWVKAICEVVQSACAAENLPLPKLLSEPGRSLIATSCVTAYTVGSSKTIP 340 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + +D M+D RP Y + + N I G CE+GD + N + Sbjct: 341 EIRTYVSIDGGMSDNPRPITYQSVYRAVI-ANKLSVSHTETVTIAGKHCESGDILIKNAQ 399 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + PGD+L + TGAY + YN ++V + ++I R T+Q+LI D + Sbjct: 400 LPKTEPGDILVVMATGAYNYSMASNYNRLPRPAAVVVANGEANLILQRETYQDLIRQDCL 459 Query: 417 PAWLQ 421 P L+ Sbjct: 460 PERLK 464 >gi|293375752|ref|ZP_06622023.1| diaminopimelate decarboxylase [Turicibacter sanguinis PC909] gi|292645621|gb|EFF63660.1| diaminopimelate decarboxylase [Turicibacter sanguinis PC909] Length = 430 Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats. Identities = 123/425 (28%), Positives = 190/425 (44%), Gaps = 14/425 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 L VS + L + QTP Y + + +N + F V YA KA Sbjct: 7 MNIENQQLFIGGVSCQTLVNTYQTPLYVFDEALLRQNCKDYRKHFKVEERGNRVAYAGKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + + G LD+VS GEL A A P + ++F G KT DEI++ L+ G+ Sbjct: 67 FLPLYMCHLIKEEGLYLDVVSGGELYTAYKADFPMDHVLFHGNNKTFDEINMGLEYGVGV 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI--H 179 F V++ EL+TLN GK+ + R+ P I A+TH I TG+ + KFG + Sbjct: 127 FVVDNYYELETLNTMCHKRGKQQNVYLRITPGIEAHTHDYIKTGQIDSKFGFTLSNGDLQ 186 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGG 238 + + G+ HIGSQI + F +++ L + ++ I +D+GG Sbjct: 187 RCLEVFHKYEHLNLIGLHAHIGSQIFDVNPFLDEVEIMMTLVKDIKEQFGFEITDVDLGG 246 Query: 239 GLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 G+G+ Y P S + + A + + ++I+EPGR +VA+ G + V Sbjct: 247 GVGVYYTEKDAPKSIAQFCEAILTKAQTVCETLQIDIPRLIIEPGRSIVANAGSTLYTVG 306 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 S+K D +D M D +RP+LY A +E N H I G CE+GD Sbjct: 307 SMKDIKDVRTYVSVDGGMTDNIRPSLYQAVYECAI-ANWMESGNERHVTIAGKCCESGDI 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + + GD+L I TGAYG S YN + V + +I R T++EL Sbjct: 366 LITDVDVNKIESGDILIITSTGAYGYSMSSNYNKIPKAAVVAVKDGEAQLICRRQTYEEL 425 Query: 411 IELDS 415 + L+ Sbjct: 426 LSLEV 430 >gi|320008557|gb|ADW03407.1| diaminopimelate decarboxylase [Streptomyces flavogriseus ATCC 33331] Length = 463 Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats. Identities = 125/419 (29%), Positives = 196/419 (46%), Gaps = 12/419 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G+L + + +LA TP Y + + +AF G D V YA KA ++AV Sbjct: 45 DGALTVGGIEVARLAEEFGTPAYFLDESDFRARCRAWVDAF-GTDADVFYAGKAFLSRAV 103 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ LA G LD+ S GEL AL A +PAERI F G KT+ EI+ A+ +G+ ++S Sbjct: 104 VRWLAEEGLNLDVCSGGELATALDAGMPAERIAFHGNNKTVAEIERAVGAGVGRIVLDSF 163 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYA 185 E+ ++ A LG + + RV + A+TH+ I+T ++ KFGI + A Sbjct: 164 QEIARVSHIAQRLGTRQRVQIRVTVGVEAHTHEFIATAHEDQKFGIALADGQAAEAVRRA 223 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 TL G+++ G+ HIGSQI + F + + + L ++R + ID+GGGLGIAY Sbjct: 224 LTLDGLELIGIHSHIGSQIFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAY 283 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 SD P + A + +I +EPGR +V + +V +IK Sbjct: 284 TSDDDPREPHEIAKALGDIVTRECESAGLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLE 343 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T +V+ + D + +VG CE+GD + + + Sbjct: 344 GLRTYVSVDGGMSDNIRTALYDAEYSVALVSRSSDAEPMLVRVVGKHCESGDIVVKDAFL 403 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDL+ + TGAY + YN L P + V Q +I R T ++L+ LD Sbjct: 404 PSDLAPGDLIAVPATGAYCRSMASNYNHALRPPVVAVRDGQARVIVRRETEEDLLRLDV 462 >gi|257086803|ref|ZP_05581164.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis D6] gi|256994833|gb|EEU82135.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis D6] gi|315027325|gb|EFT39257.1| diaminopimelate decarboxylase [Enterococcus faecalis TX2137] Length = 436 Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 14 MN----RENHLEVGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 70 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 130 IGTIVIDNFYEIDLLEELLATRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 189 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 190 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 249 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 250 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 309 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 310 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANREGYDSVKKVTVVGKYCESG 369 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T++ Sbjct: 370 DVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYE 429 Query: 409 ELIELDS 415 ++ LD Sbjct: 430 DMTTLDC 436 >gi|187935097|ref|YP_001887472.1| diaminopimelate decarboxylase [Clostridium botulinum B str. Eklund 17B] gi|187723250|gb|ACD24471.1| diaminopimelate decarboxylase [Clostridium botulinum B str. Eklund 17B] Length = 431 Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats. Identities = 131/432 (30%), Positives = 210/432 (48%), Gaps = 17/432 (3%) Query: 1 MS---AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMV 55 M+ + K L + L TP Y I +N + F V Sbjct: 1 MNLFGSMKIENNELTIGGIKSTDLVKEYGTPLYVMDEGLIRQNCNEYYKYFKCDNSSNRV 60 Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 YA KA + K + LD+VS GEL A + P ++++F G KT+DEI+L + Sbjct: 61 AYAGKAFLTLEMCKIINEENLSLDVVSGGELFIAHKSGFPLDKVMFHGNNKTLDEIELGV 120 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 + G+ F V++ E++ LN+ A S K + R+ P I A+TH+ I TG+ + KFG Sbjct: 121 KLGVGRFVVDNYYEMEELNRIAASYNKIQKVFLRITPGIEAHTHEYIKTGQVDSKFGFAP 180 Query: 176 --HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQ 232 + I + LP +++SG+ HIGSQI +IE + A +++ L ++++ N I+ Sbjct: 181 VGNMIEDAINKSINLPNIELSGLHCHIGSQIFEIEPYEDAVEIMLGLIKKIKQNTGYLIK 240 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGI 285 +D+GGG GI Y+ +P ++ +Y I + +I+EPGR +V + GI Sbjct: 241 ELDLGGGFGIYYNRGDKPKTTKEYCEAILNKVDEVCSRTGLSKPSLIIEPGRSIVGNSGI 300 Query: 286 LVTKVISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 + V SIK +D M+D +RP LY A +E + N L I G Sbjct: 301 TLYTVGSIKDIPGVRKYVSVDGGMSDNIRPALYHAEYEC-MLANKVEKDLKETVTICGKC 359 Query: 345 CETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPR 404 CE+GD + + I+ P+ D+L + TGAYG S YN P +MV ++ +I R Sbjct: 360 CESGDILLNDVNISTPQSNDILSVMTTGAYGYSMSNNYNKIPRPPVVMVKDNKERLICRR 419 Query: 405 MTFQELIELDSI 416 T+++LI+ + I Sbjct: 420 ETYEDLIQNEII 431 >gi|145219513|ref|YP_001130222.1| diaminopimelate decarboxylase [Prosthecochloris vibrioformis DSM 265] gi|145205677|gb|ABP36720.1| diaminopimelate decarboxylase [Chlorobium phaeovibrioides DSM 265] Length = 422 Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats. Identities = 156/417 (37%), Positives = 231/417 (55%), Gaps = 4/417 (0%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 F + G L E L LA TP Y S ++ ++Y F AF + + CY++KAN Sbjct: 7 FHFEAGELSCEGAGLSALAEEFGTPLYVTSRRSLVESYREFEAAFASLPHLTCYSVKANF 66 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N VI+ LG+G D+ S GEL RAL A VP+ERI+ +GVGK DEI AL+SG+ Sbjct: 67 NLNVIREFGELGAGCDVNSGGELYRALQAGVPSERIIVAGVGKRPDEIAYALKSGVLLLK 126 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 VES SEL+ +++ A G A +A RVNP++ A TH I+TG ++KFGI ++ +++ Sbjct: 127 VESLSELRAIDRIAGEEGVVASVALRVNPNVTAETHPYITTGDSKEKFGIDEAELPGIFS 186 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +L V++ G+DMHIGSQI E + A L D+ R G I+++D+GGG + Sbjct: 187 LLGSLHNVRLIGLDMHIGSQIFDTEFYVAALTKLLDVFSYARGAGFAIEYLDIGGGFPVT 246 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK-KSADKTFV 302 Y + +A + K+ILEPGRFLVA+ +L++K++ K K F Sbjct: 247 YDPMKPATAIERFAEKLVPMLKETGAKVILEPGRFLVANSTVLLSKILYKKSNHTGKKFF 306 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 ++D M + +RP LY ++HE+ + + AD+VGP+CE+ DF A R+I Sbjct: 307 VVDAGMTELIRPALYQSHHEVLSVRQHDQ---RVVADVVGPVCESSDFFARGREIDDAPE 363 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 G LL + GAY AV + YN RL E+MV+G + ++R R T ++L D Sbjct: 364 GGLLAVMSCGAYAAVMASNYNGRLRPAEVMVDGGEPRLMRRRETLEQLTAHDVFTPR 420 >gi|328466300|gb|EGF37457.1| diaminopimelate decarboxylase [Listeria monocytogenes 1816] Length = 436 Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats. Identities = 129/421 (30%), Positives = 194/421 (46%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KL TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLTEKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+ +EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 134 NYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 193 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + G + + +++GGG G Sbjct: 194 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P S+Y I +I +EPGR LV + G + KV S K Sbjct: 254 VRYTAEDEPLEPSEYVRQIMDEVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRK 313 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + ++ +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 314 EVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIW 372 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN + V +I R T++ L++ Sbjct: 373 DLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPSVVFVENGVDKLIVARETYENLVQN 432 Query: 414 D 414 D Sbjct: 433 D 433 >gi|47093381|ref|ZP_00231148.1| diaminopimelate decarboxylase [Listeria monocytogenes str. 4b H7858] gi|47018252|gb|EAL09018.1| diaminopimelate decarboxylase [Listeria monocytogenes str. 4b H7858] Length = 428 Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats. Identities = 129/421 (30%), Positives = 194/421 (46%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KL TP Y Y I F F+ G+ V YA KA S Sbjct: 6 EGHLEIGGVDTLKLTEKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 65 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+ +EI +AL GI CF ++ Sbjct: 66 AIYQLMAEEGLSLDVVSGGELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID 125 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 126 NYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 185 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + G + + +++GGG G Sbjct: 186 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFG 245 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P S+Y I +I +EPGR LV + G + KV S K Sbjct: 246 VRYTAEDEPLEPSEYVRQIMDEVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRK 305 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + ++ +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 306 EVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIW 364 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN + V +I R T++ L++ Sbjct: 365 DLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPSVVFVENGVDKLIVARETYENLVQN 424 Query: 414 D 414 D Sbjct: 425 D 425 >gi|315169667|gb|EFU13684.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1342] Length = 436 Score = 268 bits (686), Expect = 1e-69, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 177/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 14 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + + I F G KT +E+ AL + Sbjct: 70 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMESAEIEFHGNNKTPEELRYALDNK 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 130 IGTIVIDNFYEIDLLEELLATRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 189 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 190 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 249 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 250 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 309 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 310 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANRDGHDSVKKVTVVGKYCESG 369 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T++ Sbjct: 370 DVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYE 429 Query: 409 ELIELDS 415 ++ LD Sbjct: 430 DMTTLDC 436 >gi|256842929|ref|ZP_05548417.1| diaminopimelate decarboxylase [Lactobacillus crispatus 125-2-CHN] gi|256614349|gb|EEU19550.1| diaminopimelate decarboxylase [Lactobacillus crispatus 125-2-CHN] Length = 436 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 119/422 (28%), Positives = 193/422 (45%), Gaps = 14/422 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSN 64 +G L V + +LA TP Y I + F F+ + V YA KA + Sbjct: 12 EQGHLTIGGVDIVELAQKYGTPLVVYDVDQIRRQIRAFKKVFEEENMAYAVSYASKAFAA 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + +A G+ D+VS GEL A+ A P ER+ F G K++ E+++A+++ + + Sbjct: 72 IAMYQVIAEEGAYTDVVSAGELFTAIKANFPMERVSFHGNNKSLTELEMAVKNHVGKIII 131 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E++ L Q + R+ P I+A+TH+ TG+ + KFG + + A Sbjct: 132 DNFHEIQLLAQVLKKYDATISVMLRIAPGISAHTHEYDQTGQIDSKFGFDLESGQAEKAL 191 Query: 185 ASTL--PGVKISGVDMHIGSQIDQIESFHK-AFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 L P +K+ G+ HIGSQI + F A KL+ G+ Q I+VGGG G Sbjct: 192 KQVLANPRMKMLGIHAHIGSQIFALNGFEMGAQKLMVVAQDWREKYGYLAQVINVGGGFG 251 Query: 242 IAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y + P ++ + +I +EPGR +V G + V S K Sbjct: 252 IKYTQEDHPLRPEEFVKTIVKVIKTEAEKMNYPLPEIDIEPGRSIVGPAGYNLYTVGSRK 311 Query: 295 KSADKT-FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 ++ +D M D +RP LY A +E +P L H I G CE+GD +A Sbjct: 312 DIPGYRSYITVDGGMGDNIRPALYQAKYETVLATDPQA-PLTEHVRIAGKYCESGDILAE 370 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 ++ + + GDLL + TGAYG + YN + + ++ R + ++L+ L Sbjct: 371 DQALPQVKAGDLLAMLDTGAYGYSMASNYNRNPRPVVVFAENGKAKLVIKRESLEDLVHL 430 Query: 414 DS 415 D Sbjct: 431 DQ 432 >gi|325841752|ref|ZP_08167446.1| diaminopimelate decarboxylase [Turicibacter sp. HGF1] gi|325489871|gb|EGC92222.1| diaminopimelate decarboxylase [Turicibacter sp. HGF1] Length = 430 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 123/425 (28%), Positives = 190/425 (44%), Gaps = 14/425 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 L VS + L + QTP Y + + +N + F V YA KA Sbjct: 7 MNIENQQLFIGGVSCQTLVNTYQTPLYVFDEALLRQNCKDYRKHFKVEERGNRVAYAGKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + + G LD+VS GEL A A P + ++F G KT DEI++ L+ G+ Sbjct: 67 FLPLYMCHLIKEEGLYLDVVSGGELYTAYKADFPMDHVLFHGNNKTFDEINMGLEYGVGV 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI--H 179 F V++ EL+TLN GK+ + R+ P I A+TH I TG+ + KFG + Sbjct: 127 FVVDNYYELETLNTMCHKRGKQQNVYLRITPGIEAHTHDYIKTGQIDSKFGFTLSNGDLQ 186 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGG 238 + + G+ HIGSQI + F +++ L + ++ I +D+GG Sbjct: 187 RCLEVFHKYEHLNLIGLHAHIGSQIFDVNPFLDEVEIMMTLVKDIKEQFGFEITDVDLGG 246 Query: 239 GLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 G+G+ Y P S + + A + + ++I+EPGR +VA+ G + V Sbjct: 247 GVGVYYTEKDAPKSIAQFCEAILTKAQTVCETLQIDIPRLIIEPGRSIVANAGSTLYMVG 306 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 S+K D +D M D +RP+LY A +E N H I G CE+GD Sbjct: 307 SMKDIKDVRTYVSVDGGMTDNIRPSLYQAVYECAI-ANWMESGNERHVTIAGKCCESGDI 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + + GD+L I TGAYG S YN + V + +I R T++EL Sbjct: 366 LITDVDVNKIESGDILIITSTGAYGYSMSSNYNKIPKAAVVAVKDGEAQLICRRQTYEEL 425 Query: 411 IELDS 415 + L+ Sbjct: 426 LSLEV 430 >gi|296135146|ref|YP_003642388.1| diaminopimelate decarboxylase [Thiomonas intermedia K12] gi|295795268|gb|ADG30058.1| diaminopimelate decarboxylase [Thiomonas intermedia K12] Length = 430 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 171/418 (40%), Positives = 241/418 (57%), Gaps = 7/418 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--CYALK 60 Y +L E V+ +A TP Y YS +IE+ +S A V YA+K Sbjct: 14 HIAYVGSTLKIEQVTASAVAAEFGTPTYVYSRASIEEAAQRYSQAAQASPVHVALRYAVK 73 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AV++ LA LG G DIVS GEL+R LAA A ++VFSGVGK+ D++ AL G+ Sbjct: 74 ANSNLAVLQLLARLGWGFDIVSAGELKRVLAAGGEAGKVVFSGVGKSADDMRFALDVGVE 133 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SEL LN+ A + GK A +A RVNPD++A TH ISTG K +KFGI Q Sbjct: 134 CFNVESPSELAALNRVAQAAGKVARVALRVNPDVDAGTHPYISTGLKTNKFGISQDQAAQ 193 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L + V++ G+ HIGSQI +E + A + DL +Q+ G I+HID+GGGL Sbjct: 194 LALQTAQFEQVQLVGIACHIGSQITTVEPYLDALDKVLDLVEQMERKGAKIEHIDLGGGL 253 Query: 241 GIAYHSDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 GI Y + P + L+ + G I++EPGR +V + G+L+T+ + +K + Sbjct: 254 GIRYTDETPPTPQEWLSPLLARISARGFGHRTIVIEPGRSIVGNAGVLLTRTLFLKSTPV 313 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K F ++D MND +RP LY A E + + + DIVGP+CE+ D++A +R + Sbjct: 314 KHFAVVDAGMNDLIRPALYSA--EQAVVPAEQREGSALKYDIVGPVCESADWLARDRAL- 370 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL I +GAYG V + YNSR E+MV+G+ +IRPR T ++L + + Sbjct: 371 VLAEGDLLAILSSGAYGMVMASNYNSRGRPAEVMVDGATATLIRPRETPEQLYASERL 428 >gi|251780918|ref|ZP_04823838.1| diaminopimelate decarboxylase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085233|gb|EES51123.1| diaminopimelate decarboxylase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 431 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 129/427 (30%), Positives = 213/427 (49%), Gaps = 14/427 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT--MVCYALK 60 + K + L + L TP Y I +N + F ++ V YA K Sbjct: 6 SMKIEDNELTIGGIKSTDLVKEYGTPLYVMDEGLIRQNCNDYYRYFKCNNSLNRVAYAGK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A + K + LD+VS GEL A + P ++++F G KT+DEI+L ++ G+ Sbjct: 66 AFLTLEMCKIINEENLSLDVVSGGELFTAYKSGFPLDKVMFHGNNKTLDEIELGVKLGVG 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQI 178 F V++ E++ LN+ A S K I R+ P I A+TH+ I TG+ + KFG + I Sbjct: 126 RFVVDNYYEMEALNRMAASYNKVQKIFLRITPGIEAHTHEYIKTGQVDSKFGFAPVGNMI 185 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVG 237 + LP +++SG+ HIGSQI +IE + A +++ L ++ + G+ I+ +D+G Sbjct: 186 EDAINKSIDLPNIELSGLHCHIGSQIFEIEPYEDAVEIMLGLIKKIQENTGYLIKELDLG 245 Query: 238 GGLGIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG GI Y+ +P ++ +Y + G + +I+EPGR +V + GI + + Sbjct: 246 GGFGIYYNRGDKPKTTKEYCEAILNKVDEVCSRTGQSKPSLIIEPGRSIVGNSGITLYTI 305 Query: 291 ISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 SIK +D M+D +RP LY+A +E + N L I G CE+GD Sbjct: 306 GSIKDIPGVRKYVSVDGGMSDNIRPALYNAEYEC-MLANKVEKDLKETVTICGKCCESGD 364 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + N ++ P+ D+L + TGAYG S YN P +MV ++ +I R T+++ Sbjct: 365 ILLNNVNLSEPQSNDILSVMTTGAYGYSMSNNYNKIPRPPVVMVKDNKERLICRRETYED 424 Query: 410 LIELDSI 416 LI+ + + Sbjct: 425 LIQNEVV 431 >gi|315503932|ref|YP_004082819.1| diaminopimelate decarboxylase [Micromonospora sp. L5] gi|315410551|gb|ADU08668.1| diaminopimelate decarboxylase [Micromonospora sp. L5] Length = 461 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 113/419 (26%), Positives = 184/419 (43%), Gaps = 13/419 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G+L + + LA TP Y + + F AF D V YA KA +AV Sbjct: 44 GGALTVAGLDVRDLAAEYGTPAYVLDEDDLRERCREFRAAFP--DADVYYAGKAFLCRAV 101 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ +A G LD+ + GEL AL+A +P ERI F G K++ E+ A+ +G+ V+S Sbjct: 102 VRMIAEEGMFLDVCTGGELATALSAGMPPERIGFHGNNKSVAELTRAVDAGVGRIIVDSF 161 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 +E+ L++ A G + + RV + A+TH+ I+T ++ KFG + + A Sbjct: 162 TEIDRLSELARERGVRPKVLVRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAAAAAFKI 221 Query: 188 LPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAY 244 L ++ G+ HIGSQI F + + + L Q+R G + +D+GGG GIAY Sbjct: 222 LDEDVLELRGLHSHIGSQIFDASGFEVSARRVLALQSQIRDARGVELPELDLGGGFGIAY 281 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 + P S D A + + + +EPGR +V + + ++K Sbjct: 282 TTQDDPASPHDLAKRLRKIVDGECAAENLAVPHLSVEPGRAIVGPAVFTLYQAGTVKDVD 341 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T + N + A +VG CE+GD + + + Sbjct: 342 GLRTYVSVDGGMSDNIRTALYDASYSATLANRTSTAPPMLARVVGKHCESGDIVVKDEFL 401 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 +PGDL+ + TGAY + YN P + V + +I R T +L+ LD Sbjct: 402 PADVQPGDLVAVPGTGAYCRSMASNYNHVPRPPVVAVREGRARLIVRRETEDDLLALDV 460 >gi|295692736|ref|YP_003601346.1| diaminopimelate decarboxylase [Lactobacillus crispatus ST1] gi|295030842|emb|CBL50321.1| Diaminopimelate decarboxylase [Lactobacillus crispatus ST1] Length = 436 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 112/422 (26%), Positives = 186/422 (44%), Gaps = 14/422 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSN 64 +G L V +LA TP Y I + F F+ + V YA KA + Sbjct: 12 EQGHLTIGGVDTVELAQKYGTPLVVYDVDQIRRQIRAFKKVFEEENMAYAVSYASKAFAA 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + +A G+ D+VS GEL A+ A P ER+ F G K++ E+++A+++ + + Sbjct: 72 IAIYQVIAEEGAYTDVVSAGELFTAIKANFPMERVSFHGNNKSLTELEMAVKNHVGKIII 131 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E++ L Q + R+ P I+A+TH+ TG+ + KFG + + A Sbjct: 132 DNFHEIQLLAQVLKKYDATISVMLRIAPGISAHTHEYDQTGQIDSKFGFDLESGQAEKAL 191 Query: 185 ASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 L P +K+ G+ HIGSQI + F A + L + Q R + + GG Sbjct: 192 KQVLANPRMKMLGIHAHIGSQIFALNGFEMAAQKLMVVAQDWREKYGYLAQVINVGGGFG 251 Query: 243 AYHSDHRPPSSSD--------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 ++ P + + +I +EPGR +V G + V S K Sbjct: 252 IKYTQEDHPLRPEEFVKTIVKVIKTEAEKMNYPLPEIDIEPGRSIVGPAGYNLYTVGSRK 311 Query: 295 KSADKT-FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 ++ +D M D +RP LY A +E +P L H I G CE+GD +A Sbjct: 312 DIPGYRSYITVDGGMGDNIRPALYQAKYETVLATDPQA-PLTEHVRIAGKYCESGDILAE 370 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 ++ + + GDLL + TGAYG + YN + + ++ R + ++L+ L Sbjct: 371 DQALPQVKAGDLLAMLDTGAYGYSMASNYNRNSRPAVVFAENGKAKLVIKRESLEDLVHL 430 Query: 414 DS 415 D Sbjct: 431 DQ 432 >gi|330815285|ref|YP_004358990.1| Diaminopimelate decarboxylase [Burkholderia gladioli BSR3] gi|327367678|gb|AEA59034.1| Diaminopimelate decarboxylase [Burkholderia gladioli BSR3] Length = 423 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 179/423 (42%), Positives = 258/423 (60%), Gaps = 7/423 (1%) Query: 1 MSA--FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA 58 M+ F Y G+LHAE + +KLA TP Y YS A+ Y ++ A +G + A Sbjct: 1 MTHPVFDYVNGTLHAEGIPTDKLAEHFDTPLYVYSRAALTAAYQAYAQACEGRRAAIHVA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KANSN V+ A LG+G DIVS GEL R LAA AE +VFSGVGK+ +E+ +ALQ+G Sbjct: 61 VKANSNLGVLNVFARLGAGFDIVSGGELARVLAAGGKAENVVFSGVGKSAEEMRVALQAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + CFNVES EL L++ A SLGK+AP++ RVNPD++ TH ISTG K +KFG+ + Sbjct: 121 VKCFNVESIPELDRLDEVAGSLGKRAPVSLRVNPDVDPKTHPYISTGLKANKFGVAFAEA 180 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + Y A+ LP +++ G+D HIGSQI ++ + A + DL +Q+ ++G I H+D+GG Sbjct: 181 RASYRAAAALPNLQVVGIDCHIGSQITELSPYLDALDKVLDLVEQIEADGIPIHHVDIGG 240 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 GLGI Y + P A+L + G+ Q ++ EPGR L + GIL+T+V +K Sbjct: 241 GLGITYADETPPAIGEFVAALFARLDARGHGQREVYFEPGRSLTGNAGILLTRVEFLKPG 300 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +K F I+D AMND RP +Y+AYH I + +G + D+VGP+CE+GD++ R Sbjct: 301 EEKNFAIVDAAMNDLARPAMYEAYHAIVPVKEQSGHASAV-YDVVGPVCESGDWLGRERT 359 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-S 415 +A PG+LL I GAYG V S YN+R E++V+G +++RPR T + L + Sbjct: 360 LA-IAPGELLAIRSAGAYGFVMSSNYNTRARAAEVLVDGVNAYLVRPRETIESLFGDEAI 418 Query: 416 IPA 418 +P Sbjct: 419 LPD 421 >gi|329929809|ref|ZP_08283485.1| diaminopimelate decarboxylase [Paenibacillus sp. HGF5] gi|328935787|gb|EGG32248.1| diaminopimelate decarboxylase [Paenibacillus sp. HGF5] Length = 444 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 131/433 (30%), Positives = 195/433 (45%), Gaps = 14/433 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 +G L L TP Y ++ + AF G+ V YA KA Sbjct: 12 QGHLEIGGCDTSDLKAQYGTPLYIVDEQSVRNRCREYIEAFKASGLKFQVAYASKAFCVM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + G LD+VS+GEL AL A PA+RI F G KT +EI++AL + I CF V+ Sbjct: 72 AMCRLADEEGMSLDVVSDGELYTALQAGFPADRIHFHGNNKTPEEIEMALDAEIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL L A +K I RV P + A+TH+ ISTG+ + KFG I + A Sbjct: 132 NVIELHMLQAIAAEKNRKVNILLRVTPGVEAHTHEYISTGQTDSKFGFDIGNGSAYEAVQ 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGI 242 A + + G+ HIGSQI ++E F A + + + ++ G + +++GGG GI Sbjct: 192 LAEAQANIHLMGIHSHIGSQIFEVEGFQMAVQRVAEFAASVKEGLGVVFKVVNLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKK 295 Y P S Y I N +I +EPGR +V D G + V + K Sbjct: 252 RYVDGDTPLQVSQYVKAITDAVKNHFAGLGSELPEIWVEPGRSIVGDAGTTLYTVGTSKD 311 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M D RP LY++ +E N A + I G CE+GD + + Sbjct: 312 IPGVRKYVAVDGGMTDNPRPALYESKYEALL-ANRAKEEPEETVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ GDLL + TGAY + YN + V Q +++ R + ++I D Sbjct: 371 LELPKVETGDLLAVSCTGAYNYSMASNYNRIRKPAVVFVKDGQSNLVVRRESLADIISND 430 Query: 415 SIPAWLQKTPKQS 427 +PA + K S Sbjct: 431 VVPADVTKETVTS 443 >gi|315646372|ref|ZP_07899490.1| diaminopimelate decarboxylase [Paenibacillus vortex V453] gi|315278015|gb|EFU41335.1| diaminopimelate decarboxylase [Paenibacillus vortex V453] Length = 443 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 131/433 (30%), Positives = 194/433 (44%), Gaps = 14/433 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQ 65 +G L L TP Y ++ + AF G+ V YA KA Sbjct: 12 QGHLEIGGCDTSDLKAQYGTPLYIVDEQSVRNRCREYIEAFNASGLKFQVAYASKAFCVM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + G LD+VS+GEL AL A PAERI F G KT +EI++AL + I CF V+ Sbjct: 72 AMCRLADEEGMSLDVVSDGELYTALQAGFPAERIHFHGNNKTPEEIEMALDAHIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL L A + I RV P + A+TH+ ISTG+ + KFG I + A Sbjct: 132 NVIELHMLQAIAAEKNRTVNILLRVTPGVEAHTHEYISTGQTDSKFGFDIGNGSAYEAVK 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGI 242 A + + G+ HIGSQI ++E F A + + + ++ G + +++GGG GI Sbjct: 192 LAEAQGNINLMGIHSHIGSQIFEVEGFQMAVQRVAEFASSVKEGLGVVFKVVNLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKK 295 Y P S Y I +I +EPGR +V D G + V + K Sbjct: 252 RYVDGDTPLQVSQYVKAITDAVKTHFAGLGSELPEIWVEPGRSIVGDAGTTLYTVGTSKD 311 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M D RP LY++ +E N A D++ I G CE+GD + + Sbjct: 312 IPGVRKYVAVDGGMTDNPRPALYESKYEAVL-ANRANDKVEETVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GDLL + TGAY + YN + V Q +++ R + ++I D Sbjct: 371 LDLPKVETGDLLAVSCTGAYNYSMASNYNRIRKPAVVFVKDGQSNLVVRRESLADIISND 430 Query: 415 SIPAWLQKTPKQS 427 +PA + K S Sbjct: 431 IVPANVAKETVTS 443 >gi|315282993|ref|ZP_07871276.1| diaminopimelate decarboxylase [Listeria marthii FSL S4-120] gi|313613364|gb|EFR87225.1| diaminopimelate decarboxylase [Listeria marthii FSL S4-120] Length = 436 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 129/421 (30%), Positives = 196/421 (46%), Gaps = 15/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KL TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLTEKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+ +EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 134 NYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 193 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + + G + + +++GGG G Sbjct: 194 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHGTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + Y ++ P S+Y I +I +EPGR LV + G + KV S K Sbjct: 254 VRYTAEDEPLEPSEYVRQIMDEVRDVADSNDIAIPEIWIEPGRSLVGEAGTTLYKVGSRK 313 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + ++ +D M+D +RP LYDA+++ NP I G CE+GD + Sbjct: 314 EVPGIRNYLAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIW 372 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + G++L + TGAYG + YN P + V ++ R T++ L++ Sbjct: 373 DLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGIDKLVVARETYENLVQN 432 Query: 414 D 414 D Sbjct: 433 D 433 >gi|15611345|ref|NP_222996.1| diaminopimelate decarboxylase [Helicobacter pylori J99] gi|8134398|sp|Q9ZME5|DCDA_HELPJ RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|4154810|gb|AAD05866.1| DIAMINOPIMELATE DECARBOXYLASE [Helicobacter pylori J99] Length = 405 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 160/397 (40%), Positives = 236/397 (59%), Gaps = 2/397 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LA+LGSG Sbjct: 5 EELFQTYKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLANLGSGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE++RAL A + +IVFSGVGK+ EI+ AL+ I NVES ELKT+ A Sbjct: 65 DCVSIGEIQRALKAGIKPYKIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVEEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ ++ +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLDPITEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 GILNSLQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P G R D+VGP+CE+ D + + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPCGGREISPCDVVGPVCESSDTFLKDANLPELEPGDKLAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLEI 399 >gi|315172370|gb|EFU16387.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1346] Length = 436 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 14 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRVQARGFKQTLNQLGIKNKVVYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 70 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 130 IGTIVIDNFYEIDLLEELLATRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 189 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 190 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 249 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 250 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 309 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 310 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANREGHDSVKKVTVVGKYCESG 369 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T++ Sbjct: 370 DVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYE 429 Query: 409 ELIELDS 415 ++ LD Sbjct: 430 DMTTLDC 436 >gi|297584485|ref|YP_003700265.1| diaminopimelate decarboxylase [Bacillus selenitireducens MLS10] gi|297142942|gb|ADH99699.1| diaminopimelate decarboxylase [Bacillus selenitireducens MLS10] Length = 444 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 128/422 (30%), Positives = 192/422 (45%), Gaps = 14/422 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSN 64 +G L V + LA TP Y Y I F +AF+ + V YA KA S Sbjct: 11 EKGHLTIGEVDVTGLAEAYGTPLYVYDVKDIRDRAEAFKSAFERASVQYQVAYASKAFSC 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + LG LD+ S GEL AL A P +RI F G KT DE+++A+ I C V Sbjct: 71 VAMFQLADELGLSLDVCSGGELYTALEADFPVDRIHFHGNNKTADELEMAVNERIGCIVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA- 183 ++ +EL L + + R+ P + A+TH+ ISTG+++ KFG ++ + A Sbjct: 131 DNFTELTWLMAITEAKELPMDVLIRITPGVEAHTHEYISTGQEDSKFGFDLNSGQATKAI 190 Query: 184 -YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + + GV HIGSQI + E F A K + ++ + + G+ + ++VGGG G Sbjct: 191 DMIMNHDHLHLLGVHSHIGSQIFKTEGFEHAVKEIYKSLEKWKDDLGYEPEVLNVGGGFG 250 Query: 242 IAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y P DY A G +I +EPGR +V + G + + S K Sbjct: 251 IRYSEHDEPLPIGDYIDKTVQAARSEADKRGMNVPEIWIEPGRAMVGEAGTTLYTIGSRK 310 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + +D M D +RP LY A +E N + G CE+GD + Sbjct: 311 EIPTLRTYLSVDGGMTDNIRPALYQAEYEAVV-ANKGHAPEEELVSVAGRCCESGDMLIW 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + KI PGDLL + TGAYG + YN L + V ++ + R + +L+ Sbjct: 370 DLKIPETAPGDLLAVSSTGAYGYAMASNYNRMLRPAVVFVEDGEYECVIERENYADLVRK 429 Query: 414 DS 415 +S Sbjct: 430 ES 431 >gi|241896460|ref|ZP_04783756.1| diaminopimelate decarboxylase [Weissella paramesenteroides ATCC 33313] gi|241870440|gb|EER74191.1| diaminopimelate decarboxylase [Weissella paramesenteroides ATCC 33313] Length = 438 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 126/421 (29%), Positives = 202/421 (47%), Gaps = 16/421 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 G L V+ +LA QTP Y Y I + +F F +D +V YA KA + Sbjct: 19 QNGELTIGGVTATELAKQYQTPLYVYDVNHIRQQMRSFKEVFMNRQIDYVVSYASKAFAT 78 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + A G LD+VS GE++ ALAA P ++ F+G K+I+E+++A+ +G+ + Sbjct: 79 IAMYEVAAQEGIHLDVVSGGEIQTALAANYPMSQVSFNGNNKSIEELEMAIDNGLGTIIL 138 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA- 183 ++ EL L+ K + R+ P + A+TH ISTG+ + KFG ++ + A Sbjct: 139 DNFYELSVLHDLLSERDKTQDVLLRITPGVEAHTHDYISTGQTDSKFGFDVNSGQAYAAL 198 Query: 184 -YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A P + + GV HIGSQI + F A + L DL + + Q I+ GGG GI Sbjct: 199 QKAIADPYLNVLGVSAHIGSQIFDVTGFKMAAEKLVDLVHEWG---FDPQVINTGGGFGI 255 Query: 243 AYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y +D +P ++++ + +G I +EPGR +V G + + S K Sbjct: 256 RYTADDKPLPATEFVEAIIDTITEKTTLYGMTMPAIWIEPGRAIVGPAGYNLYTIGSRKD 315 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY+A +E NP + + G CE+GD + Sbjct: 316 VPGIRTYLSVDGGMGDNIRPALYEAKYEAILANNPQAPTEEV-VRVAGKYCESGDVLVWQ 374 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + + +PGD+L + TGAYG + YN + V G Q ++ R T+ +++ LD Sbjct: 375 QALPKTKPGDVLAVLATGAYGYSMASNYNRNPRPAVVFVEGGQSQLVVERETYADMLRLD 434 Query: 415 S 415 Sbjct: 435 K 435 >gi|251796357|ref|YP_003011088.1| diaminopimelate decarboxylase [Paenibacillus sp. JDR-2] gi|247543983|gb|ACT01002.1| diaminopimelate decarboxylase [Paenibacillus sp. JDR-2] Length = 442 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 142/429 (33%), Positives = 204/429 (47%), Gaps = 14/429 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 +G L V + LA TP Y T I + + +AF G+ V YA KA S Sbjct: 12 QGHLEIGGVDVTDLAKEYGTPLYIVDETLIRQRANEYVSAFKESGLKFQVAYASKAFSVM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ G LD+VS+GEL AL A PA RI F G KT DEI++AL + I CF V+ Sbjct: 72 AMCAIADQEGLSLDVVSDGELYTALQAGFPAARIHFHGNNKTPDEINMALDANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYA 183 + EL+ LN A GKK I FR+ P + A+TH+ ISTG+++ KFG + Sbjct: 132 NFVELRMLNALAADKGKKVKILFRITPGVEAHTHEYISTGQEDSKFGFDLGNGAAKQAIQ 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGI 242 A L ++I GV HIGSQI +++ F A + Q+R G + I++GGG GI Sbjct: 192 EALELSNLEILGVHSHIGSQIFEVDGFRMAVDKVVAFAVQIRDELGLTFKVINLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + I + +I +EPGR +V D G + V ++K Sbjct: 252 RYVEGDTPLPVAQYVAAITDAVISNFSAAEFPLPEIWVEPGRSIVGDAGTTLYTVGTMKD 311 Query: 296 SADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 I +D M D RP LY + +E N A + I G CE+GD + ++ Sbjct: 312 IPGVRKYIAVDGGMMDNPRPALYQSQYEAIL-ANRANEANTETVTIAGKACESGDKLIID 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ GDLL + TGAY + YN + V Q ++ R + + ++ D Sbjct: 371 LELPKAETGDLLAVSCTGAYNYSMASNYNRFRRPAVVFVKDGQSDLVVQRESLENIVGND 430 Query: 415 SIPAWLQKT 423 IPA L K+ Sbjct: 431 VIPARLLKS 439 >gi|312794090|ref|YP_004027013.1| diaminopimelate decarboxylase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181230|gb|ADQ41400.1| diaminopimelate decarboxylase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 433 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 207/421 (49%), Gaps = 16/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSN 64 +G+L E V L L + TP Y + T I +N F ++ G + ++ YA KA Sbjct: 12 KGNLSWEGVDLLDLIEMYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCT 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +A+ + G GLD+VS GEL AL+ ++I F G KT DE+++A++ G+ + Sbjct: 72 KAMCQIAKEEGIGLDVVSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVEKGVK-IVL 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL+ L+ + KKA + R+ P I A+TH+ I TG+ + KFG+ + + Sbjct: 131 DNFDELEMLSLICKTKNKKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMV 190 Query: 185 ASTLPGVKISGV--DMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 L ++S V HIGSQI + F A +++ + ++++ G + +D+GGG G Sbjct: 191 QKVLQRQELSLVGLHCHIGSQIFETAPFKLAARVMLEFMLKIKNELGWQVDILDLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK 294 I Y + PP + I + ++LEPGR +V + GI + + SIK Sbjct: 251 IKYTAHDEPPKIEKFIEAIAEEVEEFCSLRGLKKPFVVLEPGRSIVGEAGITLYTIGSIK 310 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + + + +D M D R LY A ++ + NP G R + I G CE+GD + Sbjct: 311 EIPNVRNYASVDGGMTDNPRYALYQARYDAYVVENPLGQRTKV-YTIAGRCCESGDILIK 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ + G L I TGAY S YN +++ Q +I R T+++L+ Sbjct: 370 DIKLPELKTGQHLAILATGAYNYSMSSNYNRFPRPAVVLLKNGQARVIVKRETYEDLVRN 429 Query: 414 D 414 D Sbjct: 430 D 430 >gi|297618779|ref|YP_003706884.1| diaminopimelate decarboxylase [Methanococcus voltae A3] gi|297377756|gb|ADI35911.1| diaminopimelate decarboxylase [Methanococcus voltae A3] Length = 444 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 144/427 (33%), Positives = 227/427 (53%), Gaps = 15/427 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------DTMVCYALK 60 +G LH + +E++A TP Y S T I+ N+ ++ AF+ + + +A K Sbjct: 19 KDGILHIDGYKIEEIAEKYGTPLYIMSETQIKNNFEKYTQAFNRYTEETGKEVIFSFAYK 78 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N A+ L +G G D+VS GEL A + VP+ +IVF+G K ++EI + +++ I Sbjct: 79 ANTNLAITTLLNKMGCGADVVSSGELYIAKLSKVPSNKIVFNGNCKLVEEIKMGIETDIR 138 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--I 178 FNV+ S+L +N+ A +GK A ++FRVNP+++ TH KISTG K++KFG+ I Sbjct: 139 AFNVDGISDLILINETAKEMGKIANVSFRVNPNVDPKTHPKISTGLKKNKFGLDIEDGTA 198 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 A + V + G+ HIGSQ+ QI+ F + L + L G ++ +++GG Sbjct: 199 LKAIKMALEMENVNVVGIHCHIGSQLTQIDPFIEEANKLMEFIVSLSEEGIKMRDLNIGG 258 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-----CKIILEPGRFLVADVGILVTKVISI 293 GLGI Y + + P D A + +I+EPGR +V GILV K I Sbjct: 259 GLGIPYDKNTKIPVQDDLAKAVIDTIMTYSDKIELPNLIIEPGRSIVGTSGILVGKTIHR 318 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K++ ++++D MND MRP +Y+AYHEI + +I G +CE+ D Sbjct: 319 KETKVANWIMIDAGMNDMMRPAIYEAYHEITPCT--IREGTEEVLNIAGGLCESSDVFGK 376 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 +RKI + GD + + GAYG + YNSR ++ N ++ +IR R + +LI Sbjct: 377 DRKIPTIQVGDYVAVLDVGAYGISMANNYNSRGKPAMVLTNENEISLIRERESLSDLIAK 436 Query: 414 DSIPAWL 420 D +P L Sbjct: 437 DRVPNHL 443 >gi|228914093|ref|ZP_04077713.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229090475|ref|ZP_04221713.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-42] gi|228692825|gb|EEL46546.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-42] gi|228845546|gb|EEM90577.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 449 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 143 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L +++R + ++ ++VGGG GI Sbjct: 203 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 263 RYTESDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 322 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDI 382 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 383 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 442 Query: 416 I 416 I Sbjct: 443 I 443 >gi|302871382|ref|YP_003840018.1| diaminopimelate decarboxylase [Caldicellulosiruptor obsidiansis OB47] gi|302574241|gb|ADL42032.1| diaminopimelate decarboxylase [Caldicellulosiruptor obsidiansis OB47] Length = 433 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 122/422 (28%), Positives = 206/422 (48%), Gaps = 16/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSN 64 +G+L E + L +L + TP Y + T I +N F ++ G + ++ YA KA Sbjct: 12 KGNLCWEGIDLLELIEMYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCT 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +A+ + G GLD+VS GEL AL+ ++I F G K DE+++A+ G+ + Sbjct: 72 KAMCRIAKEEGIGLDVVSGGELYTALSVNFEPDKIFFHGNNKVYDELEMAVDKGVK-IVL 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL L+ + KKA + R+ P I A+TH+ I TG+ + KFG+ + + Sbjct: 131 DNFDELDMLSLICKTKNKKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMV 190 Query: 185 ASTLPGVKISGV--DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGGGLG 241 L +++ + HIGSQI + F A +++ + +L++ I+ +D+GGG G Sbjct: 191 QKVLQKEELNLIGLHCHIGSQIFETAPFKLAARVMLEFMLKLKNELGCEIEILDLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK 294 I Y + PP + I + I+LEPGR +V + GI + + SIK Sbjct: 251 IKYTAHDEPPKIEKFIEAIAEEVEEFCSLRGLKKPFIVLEPGRSIVGEAGITLYTIGSIK 310 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + + + +D M D R LY A ++ + NP G+R + I G CE+GD + Sbjct: 311 EIPNVRNYASVDGGMTDNPRYALYQARYDAYVVENPLGERTKV-YTIAGRCCESGDILIK 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ + G L I TGAY S YN +++ Q +I R T+++L+ Sbjct: 370 DIKLPELKTGQHLAILATGAYNYSMSSNYNRFPRPAVVLLKNGQAKVIVKRETYEDLVRN 429 Query: 414 DS 415 D Sbjct: 430 DV 431 >gi|119512926|ref|ZP_01631989.1| diaminopimelate decarboxylase [Nodularia spumigena CCY9414] gi|119462422|gb|EAW43396.1| diaminopimelate decarboxylase [Nodularia spumigena CCY9414] Length = 473 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 114/425 (26%), Positives = 184/425 (43%), Gaps = 13/425 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 + L + L +P Y + + + F ++ V YA KA + Sbjct: 43 QDILEIGGCDVTTLVEQFGSPLYILDEETLRLACQQYRDTFKQYYQGESQVLYASKAWNC 102 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ A G G+D+VS GEL AL A V +++ G K+ +E+ LA++SG Sbjct: 103 LAICAIAASEGLGIDVVSGGELYTALNAGVTPDKLYLHGNNKSREELVLAIESGSTIVAD 162 Query: 125 ESESELKTLNQRAVSLGKK-APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 + + + G I R+ P I +TH+ I TG + KFG + + ++ Sbjct: 163 NWQELRILVEMAEAAPGTSAIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLDEVFT 222 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + S P + G+ HIGSQI + + ++ Q+ + G N+ ++VGGGLGI Sbjct: 223 FVSKQPSLNCVGLHAHIGSQIFERQPHRDLAAVMVQWLQKAANYGLNVTELNVGGGLGIR 282 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y PPS ++ I + + K++ EPGR L+A I + S K Sbjct: 283 YTESDDPPSIEEWVKAICEVVQSACTAANLPLPKLLCEPGRSLIATACITAYTMGSSKVV 342 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 D +D M+D RP Y + + N L I G CE+GD + N Sbjct: 343 PDIRTYVTVDGGMSDNPRPITYQSVYRAVV-ANKVSAPLTQTVTIAGKHCESGDILIKNA 401 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ PGD+L I TGAY + YN ++V + ++I R ++Q+LI D Sbjct: 402 QLPKTEPGDILVIMGTGAYNYSMASNYNRLPRPAAVVVANGEANLILRRESYQDLIRQDC 461 Query: 416 IPAWL 420 +P L Sbjct: 462 LPDRL 466 >gi|228932803|ref|ZP_04095673.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826853|gb|EEM72617.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 449 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 123/421 (29%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV G+ I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 143 NFLELEILHDLAVQHGEFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L +++R + ++ ++VGGG GI Sbjct: 203 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 263 RYTESDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 322 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDI 382 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 383 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 442 Query: 416 I 416 I Sbjct: 443 I 443 >gi|163791505|ref|ZP_02185911.1| lysA [Carnobacterium sp. AT7] gi|159873228|gb|EDP67326.1| lysA [Carnobacterium sp. AT7] Length = 437 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 128/420 (30%), Positives = 200/420 (47%), Gaps = 14/420 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 L +V L TP Y Y + I+ TF AF + V YA KA S A Sbjct: 16 NHLEIGDVDTVSLVEKYGTPLYVYDVSQIKYKARTFKKAFLDRNIKAQVAYASKAFSCLA 75 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + +A LD+VS GEL A+ + P+++I F G K+ EI AL I CF V++ Sbjct: 76 IYQLMAKEELSLDVVSGGELYTAIQSNYPSKKIHFHGNNKSDAEIVAALDYDIGCFVVDN 135 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY-- 184 ELK LN+ +K I RV P + A+TH+ I+TG+ + KFG + + A Sbjct: 136 FYELKKLNEYTAQRKQKMAILLRVTPGVEAHTHEYITTGQTDSKFGFDLDNGQAQQALEL 195 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A +P + + G+ HIGSQI + F A L +++ + +++ ++VGGG GI Sbjct: 196 ALEMPYIDVMGLHCHIGSQIFETTGFSLAIDKLLIQSKEWQELFGFHLRVLNVGGGFGIR 255 Query: 244 YHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y ++ P DY + + + +I +EPGR LV D GI + +V S K Sbjct: 256 YTAEDEPLPIEDYVNNLIDEVQSVSAKVQLPMPEIWIEPGRSLVGDAGITLYQVGSQKVI 315 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 D + ++ +D M D +RP LYDA + N D++ I G CE+GD + + Sbjct: 316 PDVRNYLAIDGGMTDNIRPALYDAKYTGVL-ANRVEDKVEETYSIAGKCCESGDMLIWDL 374 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + D+L + TGAYG + YN P + V + + R ++ +L+ L+ Sbjct: 375 PLPKADDKDILAVFSTGAYGYAMASNYNRIPRPPVVFVENGKDFLAIKRESYADLMRLEC 434 >gi|307636984|gb|ADN79434.1| diaminopimelate decarboxylase [Helicobacter pylori 908] gi|325995576|gb|ADZ50981.1| Diaminopimelate decarboxylase [Helicobacter pylori 2018] gi|325997172|gb|ADZ49380.1| Diaminopimelate decarboxylase [Helicobacter pylori 2017] Length = 405 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 163/397 (41%), Positives = 236/397 (59%), Gaps = 2/397 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LA+LGSG Sbjct: 5 EELFQTYKTPFYLYDFDKIKQAFLNYKEAFRGRKSLICYALKANSNLSILSLLANLGSGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE++RAL A + +IVFSGVGK+ EI+ AL+ I NVES ELKT+ A Sbjct: 65 DCVSIGEIQRALKAGIKPYKIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ D GGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDAGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 GILNSLQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYH 303 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A H I I G R D+VGP+CE+ D + + PGD L IEK GAYG+ Sbjct: 304 AKHAIRVITPCRG-REISPCDVVGPVCESSDTFLKDANLPELEPGDKLAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLEI 399 >gi|83590211|ref|YP_430220.1| diaminopimelate decarboxylase [Moorella thermoacetica ATCC 39073] gi|83573125|gb|ABC19677.1| diaminopimelate decarboxylase [Moorella thermoacetica ATCC 39073] Length = 434 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 138/425 (32%), Positives = 204/425 (48%), Gaps = 14/425 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQA 66 G L + +LA TP Y + I N F AF+ V YA KA A Sbjct: 7 GRLVIGGCEVVQLARDFGTPLYIFDEDCIRDNCRQFYRAFNAGSGQAEVIYAGKAFLTTA 66 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + +A G GLD+VS GEL ALAA P ERI F G K+ E+ L++GI F V++ Sbjct: 67 MCRIIASEGLGLDVVSGGELYTALAAGFPVERIYFHGNNKSYAELCQGLEAGIGRFMVDN 126 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHSLYAY 184 +EL+ L++ AV G+ A + RV P I A+TH I TG+ + KFG + Q + Sbjct: 127 FTELELLSRLAVERGQVAKVILRVTPGIEAHTHDYIRTGQVDSKFGFTLPGGQALAAARR 186 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGIA 243 A LPG++ G+ HIGSQI ++E +++A ++ +L ++ + +D+GGG GI Sbjct: 187 AGELPGIEFMGLHCHIGSQIFELEPYNEAVAVMMELAAAVKEATGLVTAELDLGGGFGIY 246 Query: 244 YHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P YA + Q ++++EPGR +V G V SIK+ Sbjct: 247 YTTGDEPRPIRAYAETILARVREEARRLNLPQPRVLVEPGRSIVGPAGSTAYTVGSIKEI 306 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D M D +RP LY A +E N AG + G CE+GD + Sbjct: 307 PGVRKYVAVDGGMADNIRPALYGAKYEAIL-ANKAGMPATEKVTVTGKCCESGDMLIWEA 365 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ GD+L + TGAYG + YN ++V +I R + +LI D Sbjct: 366 ELPPVERGDILLMPCTGAYGYTMASNYNRLGRPAAVLVRDGVADLIIKREDYSDLIRNDV 425 Query: 416 IPAWL 420 IPA L Sbjct: 426 IPARL 430 >gi|228926550|ref|ZP_04089621.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833138|gb|EEM78704.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 449 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 143 NFLELEILHDLAVQNGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L +++R + ++ ++VGGG GI Sbjct: 203 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 263 RYTESDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTIYTVGSVKD 322 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDI 382 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 383 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 442 Query: 416 I 416 I Sbjct: 443 I 443 >gi|312128102|ref|YP_003992976.1| diaminopimelate decarboxylase [Caldicellulosiruptor hydrothermalis 108] gi|311778121|gb|ADQ07607.1| diaminopimelate decarboxylase [Caldicellulosiruptor hydrothermalis 108] Length = 433 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 125/422 (29%), Positives = 208/422 (49%), Gaps = 16/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSN 64 +G+L E + L L + TP Y + T I +N F ++ G + ++ YA KA Sbjct: 12 KGNLSWEGIDLLDLIEMYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCT 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +A+ K G GLD+VS GEL AL+ ++I F G KT DE+++A+ G+ + Sbjct: 72 KAMCKIAKEEGIGLDVVSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVDRGVK-IVL 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL+ L+ + KKA + R+ P I A+TH+ I TG+ + KFG+ + + Sbjct: 131 DNFDELEMLSLICKTKNKKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMV 190 Query: 185 ASTLPGVKISGV--DMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 L ++S V HIGSQI + F A +++ + ++++ G+ I+ +D+GGG G Sbjct: 191 QKVLQRQELSLVGLHCHIGSQIFETAPFKLAARVMLEFMLKIKNELGYEIEMLDLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK 294 I Y + PP + I + I+LEPGR +V + GI + + S+K Sbjct: 251 IKYTAHDEPPRIEKFIEAIAEEVEEFCSLRGLKKPFIVLEPGRSIVGEAGITLYTIGSVK 310 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + + + +D M D R LY A ++ + NP G R + I G CE+GD + Sbjct: 311 EIPNVRNYASVDGGMTDNPRYALYQARYDAYVVENPLGQRTKV-YTIAGRCCESGDILIK 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ + G L I TGAY S YN +++ Q +I R T+++L+ Sbjct: 370 DIKLPELKTGQHLAILATGAYNYSMSSNYNRFPRPAVVLLKNGQSRVIVKRETYEDLVRN 429 Query: 414 DS 415 D Sbjct: 430 DV 431 >gi|119487027|ref|ZP_01620899.1| diaminopimelate decarboxylase [Lyngbya sp. PCC 8106] gi|119455956|gb|EAW37090.1| diaminopimelate decarboxylase [Lyngbya sp. PCC 8106] Length = 461 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 115/424 (27%), Positives = 187/424 (44%), Gaps = 13/424 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 L ++ L +P Y + + A +++V YA KA S Sbjct: 36 DHLEIGGCDVKLLVERFGSPLYIVDEQTLRAACRQYREALARYYPGESLVLYASKAWSCL 95 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ +A G GLD+VS GEL A+ A V + + G K+ DEI LA+++G Sbjct: 96 AICALVASEGLGLDVVSGGELYTAITANVNPQTLYLHGNNKSRDEILLAIETGCTIVIDN 155 Query: 126 SES-ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ S + R+ P I +TH+ I TG + KFG +Q ++++ Sbjct: 156 WLDLQMLAQLSEQRSTQAPIRVMVRLTPGIECHTHEYIRTGHLDSKFGFDPNQFDAVFSA 215 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 + PG+ G+ HIGSQI +++ ++ + + G NI ++VGGGLGI Y Sbjct: 216 IAQQPGLSCVGLHAHIGSQIFELQPHGDLASVIVEAITKASQYGLNISEVNVGGGLGICY 275 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSA 297 PPS +A + Q + ++ EPGR +V I V S K+ Sbjct: 276 TEADDPPSIETWAKTVCQAMVKACQQQNIELPKLLCEPGRSIVGPACITAYTVGSQKQIP 335 Query: 298 DKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 I +D M+D RP Y + + + VN L + G CE+GD + + + Sbjct: 336 GIRTYIAVDGGMSDNPRPITYQSVYRVVL-VNRMSAPLSQTVTVAGKHCESGDIVIKDAQ 394 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + PGD+L + TGAY + YN ++V+ + ++I R T+Q+LI D + Sbjct: 395 LPPCEPGDILAVLATGAYNYSMASNYNRLSRPAAVLVSEGECNLILERETYQDLIRQDRL 454 Query: 417 PAWL 420 P L Sbjct: 455 PERL 458 >gi|332799321|ref|YP_004460820.1| diaminopimelate decarboxylase [Tepidanaerobacter sp. Re1] gi|332697056|gb|AEE91513.1| diaminopimelate decarboxylase [Tepidanaerobacter sp. Re1] Length = 444 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 119/422 (28%), Positives = 188/422 (44%), Gaps = 15/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQA 66 L +LA TP Y I +N + ++ + + ++ V YA KA Sbjct: 12 NHLEIGGCDAVELAKEFGTPLYVMDENHIRENCRLYRDSLNNLHENSEVIYAGKAFLTME 71 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + K + G LD+VS GEL A+ + P++RI F G K+ E+++A + G+ V++ Sbjct: 72 MCKLIEEEGLSLDVVSGGELYTAIKSGFPSKRIYFHGNNKSYAELEMAAEYGVGRIVVDN 131 Query: 127 ESELKTLNQRAVSLG-KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 EL+ L A KK I R+ P I A+TH I TG+ + KFG + H+ A Sbjct: 132 FYELELLRDVAKKYQGKKIKILLRLTPGIEAHTHDYIKTGQLDSKFGFGMENGHAFMAVE 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGI 242 A ++ G+K+ G HIGSQI + E F A K++ + + ID GGG GI Sbjct: 192 NALSIKGLKLMGFHCHIGSQIFEDEPFKDAAKIMIQFAKIVNERYDFRTREIDFGGGFGI 251 Query: 243 AYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y +P + +Y + KI++EPGR +V + G + + SIK Sbjct: 252 RYTEKDKPLAVKNYIEVLVESVKEACKKHNMPIPKILIEPGRAIVGEAGTTLYTIGSIKN 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M+D +RP LY A + R I I G CE+GD + + Sbjct: 312 IPGVRKYVSVDGGMSDNIRPALYGAEYSAVIANKAGCPREEI-VSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + PGD+L + TGAY + YN + V ++ R T+++L+ + Sbjct: 371 INLPKIMPGDILAVFTTGAYHYSMASNYNMMPKPAVVFVKNKTARLVVRRQTYEDLLSNE 430 Query: 415 SI 416 Sbjct: 431 VF 432 >gi|302542535|ref|ZP_07294877.1| diaminopimelate decarboxylase [Streptomyces hygroscopicus ATCC 53653] gi|302460153|gb|EFL23246.1| diaminopimelate decarboxylase [Streptomyces himastatinicus ATCC 53653] Length = 463 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 124/419 (29%), Positives = 191/419 (45%), Gaps = 12/419 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + + + LA TP Y + AF G D V YA KA ++AV Sbjct: 45 DGVVTVGGIDVASLAERFGTPAYFLDEDDFRARCRAWREAF-GEDADVFYAGKAFLSRAV 103 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ L G LD+ SEGEL ALAA +PAERI G K+ EI A+++G+ ++S Sbjct: 104 VRWLHEEGLNLDVCSEGELVTALAAGIPAERIALHGNNKSAKEIHRAVEAGVGRIVLDSF 163 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYA 185 E+ + A LGK+ + RV + A+TH+ I+T ++ KFGIP+ A Sbjct: 164 QEIVRVAHIAQGLGKRQKVQIRVTVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRA 223 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L G+++ GV HIGSQI F A + L +++R + ID+GGGLGIAY Sbjct: 224 LKLDGLELIGVHSHIGSQIFDTSGFEVAAHRVVGLLKEVRDEHGVELPEIDLGGGLGIAY 283 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 D P D A + + ++ +EPGR +V + +V ++K+ Sbjct: 284 TPDDDPSEPHDIAKALREIVTRECAGAGLSVPRLSVEPGRAIVGPTAFTLYEVGTVKELP 343 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T +V+ + + + +VG CE+GD + + + Sbjct: 344 GLRTYVSVDGGMSDNIRTALYDAEYSVALVSRSSTAEPMVSRVVGKHCESGDIVVRDAFL 403 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDLL + TGAY + YN L P + V G + I R T ++L+ LD Sbjct: 404 PADLAPGDLLAVPATGAYCRSMASNYNHALRPPVVAVRGGEAREIVRRETEEDLLRLDV 462 >gi|256420790|ref|YP_003121443.1| diaminopimelate decarboxylase [Chitinophaga pinensis DSM 2588] gi|256035698|gb|ACU59242.1| diaminopimelate decarboxylase [Chitinophaga pinensis DSM 2588] Length = 435 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 142/428 (33%), Positives = 230/428 (53%), Gaps = 16/428 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F+Y G L+ E+V ++ L A + TPFY YS + +Y AF+ +D ++C+++ Sbjct: 1 MDLFQYKNGVLYCEDVPVDSLPAKGLPTPFYLYSANTLRLHYKKIYGAFEKLDPVICFSV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K+++N ++ LA LG+G+DIVS GEL + ++VF+GVGK+ +EI A+ S + Sbjct: 61 KSSNNVHLLNELAALGAGMDIVSGGELFVVKQSNADLSKVVFAGVGKSDEEITDAILSEV 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI-NANTHKKISTGKKEDKFGIPIHQI 178 N+ESE EL + + A L ++ + R+ PDI + T++K TG K KFGI + Sbjct: 121 GYINIESEQELARVQELAGDLKREVSVLIRIQPDITDEKTNEKTRTGYKGAKFGIDYANV 180 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 +L + P VKI G+ HIGS I + + + + LT+ L+ ++ +++GG Sbjct: 181 EALIEENADHPFVKIKGLHCHIGSPISSYTFYEECIRKMVGLTESLKQKNIILKVLNIGG 240 Query: 239 GLGIAYHSDH---RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 G Y + + L+ Y KIILEPGR + A+ +LVT+V+ +KK Sbjct: 241 GFPANYMDNDNFSWESFAGPIIELLEPYVKKEGFKIILEPGRSISANTAVLVTRVLYVKK 300 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD-----------RLHIHADIVGPI 344 S DK ILD M + +RP +Y+A+H I + A + D+VGPI Sbjct: 301 SGDKNIAILDAGMTELIRPAMYNAFHFIWPVKPEAQHLLTNRNYPVEQEGLTNYDVVGPI 360 Query: 345 CETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPR 404 CE+ D++A R + + GD + + GAYG V + YN + E+M++ + +IIR R Sbjct: 361 CESSDYLAKERALPPLQQGDYVAVFTVGAYGMVMASNYNLHVRPAEVMIDKDKIYIIRER 420 Query: 405 MTFQELIE 412 T Q+L+ Sbjct: 421 ETQQDLVR 428 >gi|302389700|ref|YP_003825521.1| diaminopimelate decarboxylase [Thermosediminibacter oceani DSM 16646] gi|302200328|gb|ADL07898.1| diaminopimelate decarboxylase [Thermosediminibacter oceani DSM 16646] Length = 442 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 194/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQ 65 +G L LA TP Y + I +N + + D+ V YA KA Sbjct: 11 KGHLEICGCDAVDLAREFGTPLYVMDESHIRQNCRLYRETLNSLHPDSGVIYAGKAFLTM 70 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + + G LD+VS GEL A+ A PAE+I F G K+ +E+ +A+ + V+ Sbjct: 71 NMCRIVEQEGLYLDVVSGGELYVAIKAGFPAEKIYFHGNNKSYEELKMAIDYNVGHIVVD 130 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + E++ LN L + I R++P I A+TH I TG+ + KFG + ++ A Sbjct: 131 NFHEMEMLNDLTKKLRHRVNILLRISPGIEAHTHDYIKTGQLDSKFGFGLENGQAMMAVD 190 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGI 242 A + GV++ G HIGSQI + E F A +L+ + ++S H I+ +D GGG G+ Sbjct: 191 RALGIKGVRLVGFHCHIGSQIFETEPFELAAELMMKFVKSVKSRFGHGIRQLDFGGGFGV 250 Query: 243 AYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y + +P +Y + +I++EPGR +V GI + + +IK Sbjct: 251 KYTEEDKPLHPREYLMTLVESVKRWARELNVAVPRILVEPGRAIVGPAGITLYTIGAIKD 310 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D ++D +RP LY A + + N AG + I G CE+GD + + Sbjct: 311 IPGVRKYVSVDGGISDNIRPALYGARY-SAVLANKAGMPVEETVSIAGKCCESGDMLIWD 369 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 K+ GD+L + TGAY + YN + V ++ R T+++L+ + Sbjct: 370 IKLPRVSTGDILAVFCTGAYHYSMASNYNMIPRPAVVFVRDGIARLVVKRETYKDLLRNE 429 Query: 415 SI 416 Sbjct: 430 IF 431 >gi|30261517|ref|NP_843894.1| diaminopimelate decarboxylase [Bacillus anthracis str. Ames] gi|47526713|ref|YP_018062.1| diaminopimelate decarboxylase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184346|ref|YP_027598.1| diaminopimelate decarboxylase [Bacillus anthracis str. Sterne] gi|165870390|ref|ZP_02215045.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0488] gi|167634404|ref|ZP_02392725.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0442] gi|167639222|ref|ZP_02397494.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0193] gi|170686644|ref|ZP_02877864.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0465] gi|170706359|ref|ZP_02896820.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0389] gi|177651559|ref|ZP_02934348.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0174] gi|190568073|ref|ZP_03020983.1| diaminopimelate decarboxylase [Bacillus anthracis Tsiankovskii-I] gi|218902627|ref|YP_002450461.1| diaminopimelate decarboxylase [Bacillus cereus AH820] gi|227815733|ref|YP_002815742.1| diaminopimelate decarboxylase [Bacillus anthracis str. CDC 684] gi|229600202|ref|YP_002865930.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0248] gi|254682418|ref|ZP_05146279.1| diaminopimelate decarboxylase [Bacillus anthracis str. CNEVA-9066] gi|254726082|ref|ZP_05187864.1| diaminopimelate decarboxylase [Bacillus anthracis str. A1055] gi|254733834|ref|ZP_05191548.1| diaminopimelate decarboxylase [Bacillus anthracis str. Western North America USA6153] gi|254740474|ref|ZP_05198165.1| diaminopimelate decarboxylase [Bacillus anthracis str. Kruger B] gi|254753865|ref|ZP_05205900.1| diaminopimelate decarboxylase [Bacillus anthracis str. Vollum] gi|254758960|ref|ZP_05210987.1| diaminopimelate decarboxylase [Bacillus anthracis str. Australia 94] gi|300118533|ref|ZP_07056272.1| diaminopimelate decarboxylase [Bacillus cereus SJ1] gi|301053058|ref|YP_003791269.1| diaminopimelate decarboxylase [Bacillus anthracis CI] gi|30255371|gb|AAP25380.1| diaminopimelate decarboxylase [Bacillus anthracis str. Ames] gi|47501861|gb|AAT30537.1| diaminopimelate decarboxylase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178273|gb|AAT53649.1| diaminopimelate decarboxylase [Bacillus anthracis str. Sterne] gi|164713885|gb|EDR19407.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0488] gi|167512661|gb|EDR88035.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0193] gi|167530292|gb|EDR93018.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0442] gi|170128893|gb|EDS97759.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0389] gi|170669167|gb|EDT19910.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0465] gi|172082837|gb|EDT67900.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0174] gi|190560807|gb|EDV14782.1| diaminopimelate decarboxylase [Bacillus anthracis Tsiankovskii-I] gi|218537180|gb|ACK89578.1| diaminopimelate decarboxylase [Bacillus cereus AH820] gi|227003325|gb|ACP13068.1| diaminopimelate decarboxylase [Bacillus anthracis str. CDC 684] gi|229264610|gb|ACQ46247.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0248] gi|298724057|gb|EFI64760.1| diaminopimelate decarboxylase [Bacillus cereus SJ1] gi|300375227|gb|ADK04131.1| diaminopimelate decarboxylase [Bacillus cereus biovar anthracis str. CI] Length = 438 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L +++R + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 372 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|52143926|ref|YP_082902.1| diaminopimelate decarboxylase [Bacillus cereus E33L] gi|51977395|gb|AAU18945.1| diaminopimelate decarboxylase [Bacillus cereus E33L] Length = 438 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 125/421 (29%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L ++LR + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEELRERTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 372 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|150400645|ref|YP_001324411.1| diaminopimelate decarboxylase [Methanococcus aeolicus Nankai-3] gi|150013348|gb|ABR55799.1| diaminopimelate decarboxylase [Methanococcus aeolicus Nankai-3] Length = 435 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 151/430 (35%), Positives = 224/430 (52%), Gaps = 16/430 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCY 57 L + + +LA TP Y S + I KN+ ++ AF G + +V Y Sbjct: 8 ITVENNKLKIDGFDVSELAEQHGTPLYVMSESQIVKNFTRYTEAFKEYSEKTGKEFIVSY 67 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A KANSN AV+K L +LG G D+VS GEL A V + +IVF+G K +EI + +++ Sbjct: 68 AYKANSNLAVLKILTNLGCGADVVSGGELYTAKMVSVDSSKIVFNGNCKLEEEIIMGIET 127 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH- 176 I FNV+S SEL+ +N+ A LGK A +AFR+NP++N TH KISTG K +KFG+ + Sbjct: 128 NIRAFNVDSISELELINEVAGKLGKVANVAFRINPNVNPKTHPKISTGLKSNKFGLDVEA 187 Query: 177 -QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 A + VKI G+ HIGSQ+ I F + K + D L+ G I+ ++ Sbjct: 188 GIALKAIKMAKEMKNVKIVGIHCHIGSQLTDISPFVEETKKVMDFVVSLKEQGIKIEDVN 247 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 +GGGLG+ Y + P D A+ ++ +I+EPGR LVA G+L+ KV Sbjct: 248 IGGGLGVPYDKNTEIPVQKDLANAVINTMLEYADKVELPNLIIEPGRSLVATAGVLLGKV 307 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 IK++ ++++D MND MRP +Y+AYHEI +I G +CE+ D Sbjct: 308 HHIKETPSAKWIMIDAGMNDMMRPAIYEAYHEITPCTIRD---EKEVVNIAGGLCESSDV 364 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 R++ D + I GAYG + YN+R + I+ + + IR R T+ +L Sbjct: 365 FGKERELPKIEVKDTIAILDVGAYGISMANNYNARGISKMILTSEDGAYTIRERETYADL 424 Query: 411 IELDSIPAWL 420 + D IP Sbjct: 425 LSKDIIPPKY 434 >gi|118476980|ref|YP_894131.1| diaminopimelate decarboxylase [Bacillus thuringiensis str. Al Hakam] gi|118416205|gb|ABK84624.1| diaminopimelate decarboxylase [Bacillus thuringiensis str. Al Hakam] Length = 449 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 143 NFLELEILHDLAVQNGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L +++R + ++ ++VGGG GI Sbjct: 203 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 263 RYTESDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 322 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDI 382 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 383 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 442 Query: 416 I 416 I Sbjct: 443 I 443 >gi|196042182|ref|ZP_03109464.1| diaminopimelate decarboxylase [Bacillus cereus NVH0597-99] gi|196026955|gb|EDX65580.1| diaminopimelate decarboxylase [Bacillus cereus NVH0597-99] Length = 438 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFLELEILHDLAVQNGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L +++R + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 372 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|228945117|ref|ZP_04107477.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229121060|ref|ZP_04250300.1| Diaminopimelate decarboxylase [Bacillus cereus 95/8201] gi|228662389|gb|EEL17989.1| Diaminopimelate decarboxylase [Bacillus cereus 95/8201] gi|228814561|gb|EEM60822.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 449 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 180/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 143 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L +++R + ++ ++VGGG GI Sbjct: 203 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEEVREQTNYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 263 RYTESDTPLTLETYVRAVTSAVREQFTVRNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 322 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D+ I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDKNEETVSIAGKCCESGDMLIWDI 382 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 383 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 442 Query: 416 I 416 I Sbjct: 443 I 443 >gi|168185565|ref|ZP_02620200.1| diaminopimelate decarboxylase [Clostridium botulinum C str. Eklund] gi|169296355|gb|EDS78488.1| diaminopimelate decarboxylase [Clostridium botulinum C str. Eklund] Length = 432 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 122/424 (28%), Positives = 197/424 (46%), Gaps = 14/424 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKA 61 + + L+ +S +L + +TP Y I +N + F G + V YA KA Sbjct: 7 MEVIDNELYIGGISTRQLTNEFKTPLYVMDEELIRENCRRYRKNFKGNNEANKVAYAGKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 A+ + + G LD+VS GEL A + P E+I F G KT +EID+A++ G+ Sbjct: 67 FLTIAMCQLINEEGMCLDVVSGGELYTAYKSNFPMEKIYFHGNNKTFEEIDMAIKLGVGR 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIH 179 F ++ E++ +N+ A K I R+ P I A+TH I TG+ + KFG + Q Sbjct: 127 FVADNFYEIQNINKIAKKYNKVQKILLRITPGIEAHTHDYIKTGQIDSKFGFTLLQDQTL 186 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGG 238 A+ ++ G HIGSQI +IE + +++ L ++ G I+ +D+GG Sbjct: 187 KAVEMANDFSNIEFVGFHCHIGSQIFEIEPYRDEVRIMLSLIKEVNEKLGCTIKELDLGG 246 Query: 239 GLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 G GI Y P D+ A + + +++EPGR +V + G + V Sbjct: 247 GFGIYYGKGDSPKKIEDFCSAILEEAIKVSKELNIQLPSLVIEPGRSIVGNAGTTLYTVG 306 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 SIK+ + +D M D +RP LY A +E N I G CE+GD Sbjct: 307 SIKEIPEIRKYVSVDGGMTDNIRPALYRASYECLV-ANKVKAASKEKVTISGKCCESGDI 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + K++ GD+L + TGAYG + YN + VN + +I R ++++L Sbjct: 366 LLEDVKVSHAESGDILAVLTTGAYGYSMASNYNKIPRSAVVFVNKGRSKLICKRQSYEDL 425 Query: 411 IELD 414 I + Sbjct: 426 ISGE 429 >gi|329571373|gb|EGG53060.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1467] Length = 436 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 14 MN----RENHLEIGGCDTVKLAQKFGTPLFVYDVAHICAQARGFKQTLNQLGIKNKVVYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 70 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 130 IGTIVIDNFYEIDLLEELLTTRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 189 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 190 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 249 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I ++ +EPGR L+A+ G + Sbjct: 250 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIY 309 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 310 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANREGHDSVKKVTVVGKYCESG 369 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T++ Sbjct: 370 DVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYE 429 Query: 409 ELIELDS 415 ++ LD Sbjct: 430 DMTTLDC 436 >gi|327440840|dbj|BAK17205.1| diaminopimelate decarboxylase [Solibacillus silvestris StLB046] Length = 439 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 129/427 (30%), Positives = 207/427 (48%), Gaps = 15/427 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L V +LA TP + Y T I K F + F+ G+ V YA KA + A Sbjct: 13 GHLTIGGVDTIELAKQYGTPLFVYDTALIRKRSRGFIDTFEQLGVKAQVAYASKAFACVA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + A LD+VS GEL A+ A PA+RI F G K+I E++LA ++GI C V++ Sbjct: 73 AYQLAAQENLSLDVVSGGELYTAIKAGFPADRIHFHGNNKSIAELELAFETGIGCIVVDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAY 184 E+ + + A +K I RV P + A+TH I+TG+ + KFG ++ + + Sbjct: 133 FYEISLIKEIAQQKNQKMKILLRVTPGVEAHTHDFITTGQADSKFGFDLNNGQADEAFKQ 192 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESF-HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +++ G+ HIGSQI + E F A K+++ + +G Q +++GGG GI Sbjct: 193 VVNDEHIELLGLHCHIGSQIFETEGFSLAAGKVMQKMGAWKEQHGFVAQVLNLGGGFGIR 252 Query: 244 YHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + +P +Y + + + + +I +EPGR LV D G + + S K Sbjct: 253 YTEEDKPLEPHEYVADMIRTVQDESKKLNLAMPEIWIEPGRSLVGDAGTSLYTIGSQKTV 312 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + I +D M+D +RP LYDA +E N A D + G +CE+GD + ++ Sbjct: 313 PNVRDYIAVDGGMSDNIRPALYDAKYEAII-ANKANDPKTSTYTVAGKLCESGDKLIIDA 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GD+L + TGAYG + YN + V + + R ++++L+ D Sbjct: 372 SLQNAHTGDILAMFCTGAYGYSMASNYNRVPRPAVVFVENGEHQLAIKRESYEDLVVND- 430 Query: 416 IPAWLQK 422 +P L K Sbjct: 431 LPLTLTK 437 >gi|29829461|ref|NP_824095.1| diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] gi|29606569|dbj|BAC70630.1| putative diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] Length = 463 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 121/419 (28%), Positives = 195/419 (46%), Gaps = 12/419 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + + +++LA TP Y + + AF G D V YA KA ++AV Sbjct: 45 DGVVRVGGIDVKQLAEEFGTPGYFLDEADFRERARAWRTAF-GHDADVFYAGKAFLSRAV 103 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ L G LD+ S GEL AL+A +PA+RI F G K+ +EI A+++G+ ++S Sbjct: 104 VRWLHEEGLNLDVCSGGELATALSAGMPADRIAFHGNNKSEEEIRTAVEAGVGRIVLDSF 163 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYA 185 E+ + A SLGK+ RV + A+TH+ I+T ++ KFGI + A Sbjct: 164 QEIVRVAHIAQSLGKRQRAQIRVTVGVEAHTHEFIATAHEDQKFGIGLADGQAAEAVRRA 223 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L G+++ G+ HIGSQI + F A + + L ++R + ID+GGGLGIAY Sbjct: 224 LALDGLELVGIHSHIGSQIFDMAGFEVAARRVVKLLAEVRDEHGVELPEIDLGGGLGIAY 283 Query: 245 HSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 S+ P + A + +I +EPGR +V + +V +IK Sbjct: 284 TSEDDPREPHEIAKALSEIVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLD 343 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T +V+ A D + +VG CE+GD + + + Sbjct: 344 GLRTYVSVDGGMSDNIRTALYDAEYSVALVSRASDAEPMLVRVVGKHCESGDIVVKDAFL 403 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDL+ + TGAY + YN L P + V+ + +I R T ++++ LD Sbjct: 404 PADLAPGDLIAVPATGAYCRSMASNYNHALRPPVVAVHDGEARVIVRRETEEDILRLDV 462 >gi|153951269|ref|YP_001398641.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. doylei 269.97] gi|152938715|gb|ABS43456.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. doylei 269.97] Length = 402 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 161/399 (40%), Positives = 235/399 (58%), Gaps = 3/399 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + ++L TPFY Y+ I++ +L AF + + YA+KANSN ++++ LA+L Sbjct: 1 MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLD 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE++RAL A A +I+FSGVGKT +E+ AL+ I N+ESE+E+ L Sbjct: 61 SGFDCVSIGEVKRALKAEAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLES 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L KA I+ RVNP+++A TH ISTG E+KFG+ I +Y YA ++ G Sbjct: 121 VAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEIDIAKKMYLYAKNSSFLEPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQ+ I ++A ++ L ++L++ +++ D+GGGLG+AY D P Sbjct: 181 VHFHIGSQLLDISPIYEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECEPDLYH 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I +EPGR+LVA G V V+ K++ K FV++D AMND +RP+ Sbjct: 241 YAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYHEI N A + D+VG ICE+GDF A R + + GD++ I+ TGAYG Sbjct: 301 LYEAYHEIILPYNQAQES---LCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYG 357 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + E+ + Q +IR R F++ I L+ Sbjct: 358 FSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQIALE 396 >gi|317131446|ref|YP_004090760.1| diaminopimelate decarboxylase [Ethanoligenens harbinense YUAN-3] gi|315469425|gb|ADU26029.1| diaminopimelate decarboxylase [Ethanoligenens harbinense YUAN-3] Length = 432 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 127/421 (30%), Positives = 192/421 (45%), Gaps = 15/421 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSNQ 65 G L +LA TP Y I +N + + V YA KA + Sbjct: 13 GHLTIGGCDTLELAEQFGTPLYVMDEATITQNCRKYVESIGTYYNSRGRVYYASKAFCCK 72 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + + + G GLD+VS GEL A++ PA+RI F G KT EI+ AL G+ F V+ Sbjct: 73 EICRIMENAGMGLDVVSGGELYTAMSVGFPADRICFHGNNKTPGEINYALDCGVGRFVVD 132 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--A 183 + +EL LN A++ KK + FR+ P I+A+TH I TG+ + KFG+ + + Sbjct: 133 NLTELALLNTLALARNKKPSVLFRIKPGIDAHTHNFIRTGQIDSKFGLALETGEAEEAVR 192 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGI 242 A LPGV ++G+ HIGSQI I F A +++ + +R ++ +++GGG GI Sbjct: 193 QAVALPGVSLTGMHCHIGSQIFDIAPFELAAEVMVNFMADMRDRHGADLTELNLGGGFGI 252 Query: 243 AYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P Y + I+LEPGR +VA GI + V ++K Sbjct: 253 QYVPGQNPVPYDRYMQAVSETVKKTCEARDMETPFIMLEPGRSIVASAGITLYTVGAVKD 312 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D R LY A + A ++ I G CE+GD I + Sbjct: 313 IPGVRTYVSVDGGMGDNPRYALYQAEYAAVVAGK-AAEKPTETVTIAGKCCESGDLIQEH 371 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 I + GD+L + TGAY + YN +M+ Q +I R +F++L+ D Sbjct: 372 TAIQPVQAGDILAVFATGAYNYSMASNYNRIPRPATVMIRDRQPRVIIRRESFEDLVRND 431 Query: 415 S 415 Sbjct: 432 V 432 >gi|65318785|ref|ZP_00391744.1| COG0019: Diaminopimelate decarboxylase [Bacillus anthracis str. A2012] Length = 438 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 123/421 (29%), Positives = 178/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G K +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKXEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L +++R + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 372 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|330469869|ref|YP_004407612.1| diaminopimelate decarboxylase [Verrucosispora maris AB-18-032] gi|328812840|gb|AEB47012.1| diaminopimelate decarboxylase [Verrucosispora maris AB-18-032] Length = 461 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 116/419 (27%), Positives = 183/419 (43%), Gaps = 13/419 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G L + + +A TP Y + F AF D V YA KA +AV Sbjct: 44 DGDLVVAGLRVRDIAAEFGTPVYVLDEGDLRSRCRDFRAAFPTED--VYYAGKAFLCRAV 101 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ +A G LD+ S GEL ALAA +P ERI F G K+ E+ AL +G+ V+S Sbjct: 102 VRMIAEEGMFLDVCSGGELAVALAAGMPPERIGFHGNNKSEAELRRALDAGVGRIIVDSF 161 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 +E+ L A + + RV + A+TH+ I+T ++ KFG + ++ A Sbjct: 162 AEIDRLTALARERAVRPRVLIRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAIAAALRI 221 Query: 188 LPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAY 244 L ++ G+ HIGSQI F + + + L Q+R G + +D+GGG GIAY Sbjct: 222 LDEGVLELRGLHSHIGSQIFDTSGFEVSARRVLALQAQIRDARGVELPELDLGGGFGIAY 281 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 S P + D A + + + + +EPGR +V + +V ++K Sbjct: 282 TSQDDPAAPHDLAKRLRKIVDSECAAEQLAVPHLSIEPGRAIVGPAVFTLYEVGTVKDVD 341 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T + + A + A +VG CE+GD + + + Sbjct: 342 GIRTYVSVDGGMSDNIRTALYDASYSATLASRASTAEPMLARVVGKHCESGDIVVKDEFL 401 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 +PGDL+ + TGAY + YN P + V Q +I R T +L+ LD Sbjct: 402 PADVQPGDLVAVPGTGAYCRSMASNYNHVPRPPVVAVRDGQARLIVRRETEADLLALDV 460 >gi|218289328|ref|ZP_03493562.1| diaminopimelate decarboxylase [Alicyclobacillus acidocaldarius LAA1] gi|218240434|gb|EED07615.1| diaminopimelate decarboxylase [Alicyclobacillus acidocaldarius LAA1] Length = 443 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 121/426 (28%), Positives = 187/426 (43%), Gaps = 14/426 (3%) Query: 3 AF-KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYAL 59 F + +G L VS L TP Y I F F +G+ + YA Sbjct: 16 HFPRNEKGHLLIGGVSAVDLVEQFGTPLIAYDEGLIRDTIRAFHRVFQEEGVPYQISYAS 75 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA A+ + + G G+D+VS GEL ALAA VPA ++ G KT +E++ A++SGI Sbjct: 76 KAFCTIAICQLVHEEGLGIDVVSGGELYTALAAGVPASKLHMHGNNKTPEELEYAIESGI 135 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 V++ E+ L G + RV P + A+TH ISTG+++ KFG + Sbjct: 136 GAVIVDNFDEIDLLADILEEKGCTVDVLVRVAPGVEAHTHDYISTGQQDSKFGFDLASHQ 195 Query: 180 SLYAYAS--TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDV 236 A+ + ++ GV HIGSQI +E F + + + R G +++ Sbjct: 196 VEEAFLRLKQVERARVIGVHAHIGSQIFDVEGFRLLADRMAGVYEDGLRRFGLPFSVLNL 255 Query: 237 GGGLGIAYHSDHRPPSSSDY------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GGG GI Y + PP + A G + +EPGR +V G+ + +V Sbjct: 256 GGGFGIPYTDEDAPPVADLVRGVIRAAKAAFAARGMDVPVLWIEPGRSIVGPAGVTLYRV 315 Query: 291 ISIKKSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 S K + +V +D M D R LY A + N A D + G CE+GD Sbjct: 316 GSRKVIPGVRNYVAIDGGMTDNPRLALYGAKYH-ACYANRAADPPDRPWSVAGKCCESGD 374 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + + P+PGD+L + TGAY + YN + + ++ R T+ + Sbjct: 375 MLIWDLPLPDPQPGDILAVFATGAYTYAMASHYNRIPKPAVVFCRDGEARLVARRETWAD 434 Query: 410 LIELDS 415 + LD Sbjct: 435 VARLDV 440 >gi|118443019|ref|YP_877435.1| diaminopimelate decarboxylase [Clostridium novyi NT] gi|118133475|gb|ABK60519.1| diaminopimelate decarboxylase [Clostridium novyi NT] Length = 432 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 122/424 (28%), Positives = 198/424 (46%), Gaps = 14/424 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKA 61 + + L+ V +LA +TP Y I +N + F G + V YA KA Sbjct: 7 MEVMDNELYIGGVGTRELASEFKTPLYVMDEELIRENCRRYRENFKGNNEVNKVAYAGKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 A+ + + G LD+VS GEL A + P E+I F G KT++EID+ ++ G+ Sbjct: 67 FLTIAMCQLINEEGMCLDVVSGGELYTAYKSEFPMEKIYFHGNNKTLEEIDMGVRLGVGR 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIH 179 F ++ E++ +N+ A K I R+ P I A+TH I TG+ + KFG + +Q Sbjct: 127 FVADNFYEIENINKIAKKYDKVQKILLRITPGIEAHTHDYIKTGQIDSKFGFTLLQNQTL 186 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGG 238 A+ ++ G HIGSQI +IE + +++ L ++++ + +D+GG Sbjct: 187 KAVEMANKFSNIEFVGFHCHIGSQIFEIEPYRDEVRIMLALIKEVKEKLGCTIKELDLGG 246 Query: 239 GLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 G GI Y P D+ A + + +++EPGR +V + G + V Sbjct: 247 GFGIYYGKGDSPKKIEDFCSAILEEAVKVSKELDIELPSLVIEPGRSIVGNAGTTLYTVG 306 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 SIK+ + +D M D +RP LY A +E N + I G CE+GD Sbjct: 307 SIKEIPEIRKYVSVDGGMTDNIRPALYRASYECLV-ANNVKAKSKEKVTISGKCCESGDI 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + N K++ GD+L + TGAYG S YN + VN Q +I R ++++L Sbjct: 366 LLENVKVSHAESGDILAVLTTGAYGYSMSSNYNKIPRPAVVFVNRGQSKLICKRQSYEDL 425 Query: 411 IELD 414 + + Sbjct: 426 VSGE 429 >gi|295704431|ref|YP_003597506.1| diaminopimelate decarboxylase [Bacillus megaterium DSM 319] gi|294802090|gb|ADF39156.1| diaminopimelate decarboxylase [Bacillus megaterium DSM 319] Length = 442 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 120/423 (28%), Positives = 181/423 (42%), Gaps = 12/423 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSN 64 L +L TP Y Y IE F +AF + YA KA Sbjct: 11 NNNHLEIGQCDTVELKKQYGTPLYIYDQELIETKCKAFHSAFRRSGFSYQIAYAGKAFLC 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + L L LD+VS GEL AL A PAERI F G KTI+E+++AL + I CF V Sbjct: 71 MEMASLLTKLDMSLDVVSGGELFTALEAGYPAERIHFHGNNKTIEEMEMALDANIGCFVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ +EL+ L+ A +KA I RV P I A+TH+ I TG+++ KFG + ++ A Sbjct: 131 DNFTELEVLHALAAERKQKASILLRVTPGIEAHTHEYIMTGQEDSKFGFGLSNDQAMKAV 190 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLG 241 A P + G+ HIGSQI +++ F +A +L D +R ++ ++VGGG G Sbjct: 191 SSALEKPYYDLLGIHCHIGSQIFEVDGFSRAIDILTDFLFSIRDKMEFEVKVLNVGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIH-------QYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y P Y + ++ +EPGR +V + G + + S K Sbjct: 251 IRYTESDSPLPVEYYVDALTEKLSRTLTEQNYTLPEVWIEPGRSIVGEAGTTLYTIGSTK 310 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + + + N D+ I G CE+GD + + Sbjct: 311 EIPGVRKYVGIDGGMTDNIRPALYDAKHEAVLANRVTDKKDETVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GDLL + TGAY + YN + V + + R T+++L+ D Sbjct: 371 IDLPRVNQGDLLAVSSTGAYNYSMASNYNRIPRPAVVFVKNGEARLAVERETYEDLVRKD 430 Query: 415 SIP 417 P Sbjct: 431 VKP 433 >gi|196035356|ref|ZP_03102761.1| diaminopimelate decarboxylase [Bacillus cereus W] gi|195992033|gb|EDX55996.1| diaminopimelate decarboxylase [Bacillus cereus W] Length = 438 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 180/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFLELEVLHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L +++R + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVRNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D+ I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDKNEETVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 372 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|257085239|ref|ZP_05579600.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis Fly1] gi|256993269|gb|EEU80571.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis Fly1] Length = 436 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ E L KLA TP + Y I F + G+ V YA Sbjct: 14 MN----REDHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYA 69 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S A+ + L D+VS GEL AL + I F G KT +E+ AL + Sbjct: 70 SKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYALDNK 129 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I +++ E+ L + + + + FRV+P ++A TH I TG+++ KFG + Sbjct: 130 IGTIVIDNFYEIDLLEELLATRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASG 189 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHID 235 + A L P + GV HIGSQI +E F A + + + + R + + ++ Sbjct: 190 QATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLN 249 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGG G+ Y P + + + I + ++ +EPGR L+A+ G + Sbjct: 250 MGGGFGVQYTQQDEPLAPATFVEKIVYSLKDHCEQLGYPLPELWIEPGRSLIAEAGTTIY 309 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K+ + ++ N G +VG CE+G Sbjct: 310 TVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANRDGHDSIKKVTVVGKYCESG 369 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL I TGAYG + YN + V Q ++ R T + Sbjct: 370 DVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRETHE 429 Query: 409 ELIELDS 415 ++ LD Sbjct: 430 DMTTLDC 436 >gi|160933534|ref|ZP_02080922.1| hypothetical protein CLOLEP_02380 [Clostridium leptum DSM 753] gi|156867411|gb|EDO60783.1| hypothetical protein CLOLEP_02380 [Clostridium leptum DSM 753] Length = 432 Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats. Identities = 127/423 (30%), Positives = 193/423 (45%), Gaps = 15/423 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANS 63 +G L LA TP Y I + + +F M YA KA + Sbjct: 11 EKGHLTIGGCDTVGLAEEYGTPLYVMDEMTIRQACRLYQKSFQENYDGHGMAFYASKALN 70 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 + + + +A G GLD+VS GEL AL A E+I F G KT DE+++AL +G+ Sbjct: 71 CKELCRIVAEEGLGLDVVSGGELYTALKAGFDPEKIHFHGNNKTQDELNMALDNGVGVIV 130 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 +++ E+K L+Q A G A ++ R+ P I+A+TH I TG+ + KFG + +L A Sbjct: 131 MDNLDEMKRLDQLAAEKGVTAQVSMRIKPGIDAHTHSFIRTGQIDSKFGFALETGEALEA 190 Query: 184 YAST--LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGL 240 + + + + HIGSQI I+ F A +++ +Q++ G ++ +++GGG Sbjct: 191 AKAAIASKNLNLKEIHCHIGSQIFDIDPFVLAAEVMMGFRKQIKDVTGVTVECMNLGGGF 250 Query: 241 GIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 GI Y P + Y + + I LEPGR +V + GI + V S+ Sbjct: 251 GIKYTDRDHPQPYNAYMSTVAKAVKAKAKEYDMPVPFICLEPGRSIVGESGITLYTVGSV 310 Query: 294 KKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K +D M D R LY + + + I + AG I G CE+GD I Sbjct: 311 KVIPKIRTYVSIDGGMTDNPRYALYKSSY-LAVIADKAGQPAVEKVTIAGKCCESGDLIQ 369 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 + I PGD L + TGAY S YN P +MV +I R T+ +LI+ Sbjct: 370 EDAMIQEAAPGDTLAVFSTGAYNYSMSSNYNRIPKPPIVMVKAGSSRVIVKRETYDDLIK 429 Query: 413 LDS 415 D Sbjct: 430 NDV 432 >gi|108562717|ref|YP_627033.1| diaminopimelate decarboxylase [Helicobacter pylori HPAG1] gi|107836490|gb|ABF84359.1| diaminopimelate decarboxylase [Helicobacter pylori HPAG1] Length = 405 Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats. Identities = 159/396 (40%), Positives = 235/396 (59%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHLGSG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLGSGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL T+ + A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FV++D MNDF+RP+LY Sbjct: 244 KILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + + PGD + IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGREISPCDVVGPVCESSDTFLKDVHLPELDPGDKIAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 398 >gi|229010823|ref|ZP_04168020.1| Diaminopimelate decarboxylase [Bacillus mycoides DSM 2048] gi|228750497|gb|EEM00326.1| Diaminopimelate decarboxylase [Bacillus mycoides DSM 2048] Length = 449 Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats. Identities = 131/422 (31%), Positives = 191/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +E+ +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEMIMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+++ KFG + ++ A Sbjct: 143 NFLELEILHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIE 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR +++R H ++ ++VGGG GI Sbjct: 203 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVRERTHYVMKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y +I +EPGR +V D G + V ++K+ Sbjct: 263 RYTDSDTPLTLETYVHAVTSTIREQFTLCEYPLPEIWIEPGRSIVGDAGTTLYTVGAVKE 322 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYGARYE-AMLANRGNDENEELVSIAGKCCESGDMLIWD 381 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL I TGAYG + YN + G I+ R T++ +I D Sbjct: 382 INLPQVASSDLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGND 441 Query: 415 SI 416 I Sbjct: 442 RI 443 >gi|328957339|ref|YP_004374725.1| diaminopimelate decarboxylase [Carnobacterium sp. 17-4] gi|328673663|gb|AEB29709.1| diaminopimelate decarboxylase [Carnobacterium sp. 17-4] Length = 438 Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats. Identities = 129/420 (30%), Positives = 195/420 (46%), Gaps = 14/420 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 L V L TP Y Y + I+ TF AF + V YA KA S A Sbjct: 16 NHLEIGGVDTVSLVEKYGTPVYVYDISQIKYKARTFKKAFQDRNIKAQVAYASKAFSCLA 75 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + +A LD+VS GEL A+ A P ++I F G K+ EI AL I CF V++ Sbjct: 76 VYQLMAKEEMSLDVVSGGELFTAIQAEYPNKKIHFHGNNKSDSEIIAALDYDIGCFVVDN 135 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 EL LN+ +K + RV P + A+TH+ I+TG+ + KFG + + A Sbjct: 136 FYELSKLNEYTKQRQQKVSVLLRVTPGVEAHTHEYITTGQTDSKFGFDLENGQAQQALEM 195 Query: 187 --TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 +P + + G+ HIGSQI + + F A L +++ + ++ ++VGGG GI Sbjct: 196 SLEMPYIDVMGLHCHIGSQIFETDGFSLAIDKLMIQSKEWQVLFDFQLRVLNVGGGFGIR 255 Query: 244 YHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y S+ P DY + + + +I +EPGR LV D GI + +V S K Sbjct: 256 YTSEDEPLPIEDYVNNLIDEVQSVSEKIQLPMPEIWIEPGRSLVGDAGITLYQVGSQKLI 315 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 D + ++ +D M D +RP LYDA + N D + I G CE+GD + + Sbjct: 316 PDVRNYLAIDGGMTDNIRPALYDAKYTGVL-ANRVADAVEETYSIAGKCCESGDMLIWDL 374 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + D+L + TGAYG + YN P + V + + R ++ +L+ LD Sbjct: 375 PLPKADATDILAVFSTGAYGYAMASNYNRIPRPPVVFVENGKDFLAIKRESYADLMRLDC 434 >gi|302521927|ref|ZP_07274269.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78] gi|318060725|ref|ZP_07979448.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actG] gi|318075515|ref|ZP_07982847.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actF] gi|302430822|gb|EFL02638.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78] Length = 465 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 124/420 (29%), Positives = 189/420 (45%), Gaps = 12/420 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 EG+L V + +LA TP Y + +AF G V YA KA ++A Sbjct: 46 EEGALSVGGVPVTRLAEEFGTPAYFLDEEDFRARCRDWRSAF-GEGADVFYAGKAFLSRA 104 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ L G LD+ S GEL AL A +PA RI F G KT EI+ A+ +G+ V+S Sbjct: 105 VVRWLHEEGLNLDVCSGGELLTALDAGMPAARIAFHGNNKTAAEIERAVAAGVGRIVVDS 164 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAY 184 EL + A +LG+ + RV + A+TH+ I+T ++ KFG+ + Sbjct: 165 FQELVRVAHTAQALGRVQRVQIRVTVGVEAHTHEFIATAHEDQKFGLALAGGQAAEAVRR 224 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A TL G+++ G+ HIGSQI + F + + + L ++R + ID+GGGLGIA Sbjct: 225 ALTLDGIELVGIHSHIGSQIFDMAGFEVSARRVVGLLAEIRDEHGVELPEIDLGGGLGIA 284 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y SD P + A + +I +EPGR +V + +V +IK Sbjct: 285 YTSDDDPREPHEIAKALGDIVTRECESAGLAVPRISVEPGRAIVGPTAFTLYEVGTIKPL 344 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + T + + D + +VG CE+GD + + Sbjct: 345 EGLRTYVSVDGGMSDNIRTALYDAEYSVALASRTSDAAPMLVRVVGKHCESGDIVVRDAF 404 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + PGDLL + TGAY + YN L P + V Q ++ R T ++L+ LD Sbjct: 405 LPADLAPGDLLAVPATGAYCRSMASNYNHALRPPVVAVRDGQARVVVRRETEEDLLRLDV 464 >gi|159039562|ref|YP_001538815.1| diaminopimelate decarboxylase [Salinispora arenicola CNS-205] gi|157918397|gb|ABV99824.1| diaminopimelate decarboxylase [Salinispora arenicola CNS-205] Length = 470 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 126/429 (29%), Positives = 196/429 (45%), Gaps = 24/429 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G+L S+ LA TP Y + F AF D V YA KA +AV Sbjct: 44 DGALAVAGCSVRDLAAEFGTPVYVLDEEDLRTRCRDFRAAFPTED--VYYAGKAFLCRAV 101 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ +A G LD+ S GEL ALAA +P ERI F G K++ E+ AL +G+ V+S Sbjct: 102 VRMIAEEGLHLDVCSGGELATALAAGMPPERIGFHGNNKSVAELSRALDAGVGRIIVDSS 161 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ L A G + + RV + A+TH+ I+T ++ KFG + ++ A Sbjct: 162 HEIDRLTGLARERGVRPRVLVRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAIAAVLRI 221 Query: 188 LPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAY 244 L ++ G+ HIGSQI F + + + L Q+R G + +D+GGG GIAY Sbjct: 222 LDEDVLELRGLHSHIGSQIFDASGFEVSARRVLALQAQIRDARGVQLPELDLGGGFGIAY 281 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVI------ 291 + P + +D A + + + +EPGR +V + +V Sbjct: 282 TTQDDPATPADLAKRLRKIVDGECAAERLAVPHLSIEPGRAIVGPAMFTLYEVGTVKSVP 341 Query: 292 ----SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 + +V +D M+D +R LYDA + +G + A +VG CE+ Sbjct: 342 VGAGGDTADGHRCYVSVDGGMSDNIRTALYDASYSATVASRASGAAP-VLARVVGKHCES 400 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 GD + + + +PGDL+ + TGAY + YN L P + V Q +I R T Sbjct: 401 GDIVVKDEFLPADVQPGDLVAVPGTGAYCRSMASNYNHVLRPPVVAVRDGQARLIVRRET 460 Query: 407 FQELIELDS 415 ++L+ LD Sbjct: 461 EEDLLALDV 469 >gi|229166360|ref|ZP_04294117.1| Diaminopimelate decarboxylase [Bacillus cereus AH621] gi|228617102|gb|EEK74170.1| Diaminopimelate decarboxylase [Bacillus cereus AH621] Length = 438 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 131/422 (31%), Positives = 192/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +E+ +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEMIMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+++ KFG + ++ A Sbjct: 132 NFLELEILHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR +++R H ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVRERTHYVMKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y +I +EPGR +V D G + V ++K+ Sbjct: 252 RYTDSDTPLTLETYVHAVTSTIREQFTLCEYPLPEIWIEPGRSIVGDAGTTLYTVGAVKE 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D+ I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYGARYE-AMLANRGNDKNEELVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL I TGAYG + YN + G I+ R T++ +I D Sbjct: 371 INLPQVASSDLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGND 430 Query: 415 SI 416 I Sbjct: 431 RI 432 >gi|258541957|ref|YP_003187390.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-01] gi|256633035|dbj|BAH99010.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-01] gi|256636092|dbj|BAI02061.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-03] gi|256639147|dbj|BAI05109.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-07] gi|256642201|dbj|BAI08156.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-22] gi|256645256|dbj|BAI11204.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-26] gi|256648311|dbj|BAI14252.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-32] gi|256651364|dbj|BAI17298.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654355|dbj|BAI20282.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-12] Length = 447 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 167/417 (40%), Positives = 241/417 (57%), Gaps = 4/417 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVI 68 L E V+L +A V TP + + A G+D + YA+KAN + A++ Sbjct: 32 LMLEGVALNAIADSVGTPCWVLGAGTLRARMRRMHTAMRNAGLDVSIHYAVKANDHLAIL 91 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + G G DIVS GEL RAL A +PA+RIVFSGVGKT E++ A+ GI NVES Sbjct: 92 TLIGQEGFGADIVSGGELARALKAGIPADRIVFSGVGKTDAELEQAISHGIGQINVESAE 151 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 EL+ ++ A LGK+A I RVNPD++A TH KI+TG +KFGIP +LYA+A TL Sbjct: 152 ELEAISAIATKLGKQATITLRVNPDVDAKTHAKITTGLAANKFGIPFQDAAALYAHAFTL 211 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 PGV+ G HIGSQI + A+ + +L + +R+ G+ + +D GGGLGI Y ++ Sbjct: 212 PGVRPVGFATHIGSQILTTTPYRAAYARVAELVRTVRAAGNAVSVVDCGGGLGICYRNET 271 Query: 249 RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA-DKTFVILDVA 307 A I G L K+ +EPGR+ + G+L++ VI K+ D F++LD A Sbjct: 272 EG-QPEALAGAIKAELGGLGVKLAIEPGRWPIGPAGVLLSSVILRKEQGMDVPFLVLDAA 330 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 MN+ +RP++YDA+H I + A + A +VGP+CE+GD A +R + + Sbjct: 331 MNELLRPSMYDAWHGILPLAPQAFSQPVSLAHVVGPVCESGDTFARDRLLPPLARNARIA 390 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQKTP 424 + TGAYGAV S TYNSR L E++V Q+ +IR R + +EL + +++P+ L K Sbjct: 391 LLDTGAYGAVMSSTYNSRPLAAEVLVEDGQWQVIRQRQSVEELWQDETVPSHLAKAT 447 >gi|229016774|ref|ZP_04173704.1| Diaminopimelate decarboxylase [Bacillus cereus AH1273] gi|229022979|ref|ZP_04179496.1| Diaminopimelate decarboxylase [Bacillus cereus AH1272] gi|228738285|gb|EEL88764.1| Diaminopimelate decarboxylase [Bacillus cereus AH1272] gi|228744510|gb|EEL94582.1| Diaminopimelate decarboxylase [Bacillus cereus AH1273] Length = 449 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 133/422 (31%), Positives = 192/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+++ KFG + ++ A Sbjct: 143 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIE 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 203 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVRERTNYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y +I +EPGR +V D G + V ++K+ Sbjct: 263 RYTESDTPLTLETYVHAVTSTIREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGAVKE 322 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYGARYE-AMLANRGNDENEELVSIAGKCCESGDMLIWD 381 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + P DLL I TGAYG + YN + G I+ R T++ +I D Sbjct: 382 INLPQVAPSDLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGND 441 Query: 415 SI 416 I Sbjct: 442 RI 443 >gi|49477226|ref|YP_035636.1| diaminopimelate decarboxylase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328782|gb|AAT59428.1| diaminopimelate decarboxylase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 438 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 125/421 (29%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L ++LR + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEELRERTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 372 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|300868260|ref|ZP_07112890.1| diaminopimelate decarboxylase [Oscillatoria sp. PCC 6506] gi|300333742|emb|CBN58074.1| diaminopimelate decarboxylase [Oscillatoria sp. PCC 6506] Length = 470 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 111/427 (25%), Positives = 182/427 (42%), Gaps = 12/427 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 + L + L +P Y + + A ++ V YA KA S Sbjct: 43 QDRLEIGGCDVVNLVEQFGSPIYILDEVTLRTACRQYREALKRYYPGESQVLYASKAWSC 102 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 AV + G G+D+VS GE+ AL A V ++ F G K+ E++LA++SG Sbjct: 103 MAVCAIASSEGLGIDVVSGGEIFTALQAGVSPNKLYFHGNNKSRSELELAIESGCTIVAD 162 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 + + + R P I +TH+ I TG + KFG + + ++A+ Sbjct: 163 NWLELSTLVEILENRATQPVRVMLRFTPGIECHTHEYIRTGHLDSKFGFDPNDLDRVFAF 222 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 S P + G+ HIGSQI +++ ++ + + G + ++VGGGLGI+Y Sbjct: 223 LSKQPSLSCIGLHAHIGSQIFELQPHEDLAGVIAEAFVKASHYGLPVGELNVGGGLGISY 282 Query: 245 HSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 PPS + +I Q K++ EPGR L+ + V S K Sbjct: 283 TEADDPPSIEAWVKVIGESVAAACQKLEIPLPKLLCEPGRSLIGSACVTAYTVGSKKVIP 342 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +D M+D RP Y + + + N L I G CE+GD + N + Sbjct: 343 GMRTYLAVDGGMSDNPRPITYQSVYRVVA-ANQMSAPLTETVTIAGKHCESGDIVIKNAQ 401 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + + +PGD+L + TGAY + YN ++V + ++I R T+Q+L+ D + Sbjct: 402 LPVSKPGDVLVVMATGAYNYSMASNYNRLPRPTAVLVRDGEANVIIQRETYQDLLRQDRL 461 Query: 417 PAWLQKT 423 P L K Sbjct: 462 PERLVKQ 468 >gi|295836505|ref|ZP_06823438.1| diaminopimelate decarboxylase [Streptomyces sp. SPB74] gi|295826063|gb|EFG64650.1| diaminopimelate decarboxylase [Streptomyces sp. SPB74] Length = 465 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 121/420 (28%), Positives = 187/420 (44%), Gaps = 12/420 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 EG+L V + +LA TP Y + +AF G V YA KA ++A Sbjct: 46 EEGALSVGGVPVTRLAEEFGTPAYFLDEEDFRARCRDWRSAF-GEGADVFYAGKAFLSRA 104 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ L G LD+ S GEL AL A +PA RI F G KT EI+ A+ +G+ V+S Sbjct: 105 VVRWLHEEGLNLDVCSGGELLTALDAGMPAARIAFHGNNKTAAEIERAVSAGVGRIVVDS 164 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAY 184 EL + A + G+ + RV + A+TH+ I+T ++ KFG+ + Sbjct: 165 FQELARVAHTAQAHGRVQRVQIRVTVGVEAHTHEFIATAHEDQKFGLALAGGQAAEAVRR 224 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A TL G+++ G+ HIGSQI + F + + + L ++R + ID+GGGLGIA Sbjct: 225 ALTLDGIELVGIHSHIGSQIFDMAGFEVSARRVVGLLAEIRDEHGVELPEIDLGGGLGIA 284 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y S+ P + A + +I +EPGR +V + +V +IK Sbjct: 285 YTSEDDPREPHEIAKALGDIVTRECESAGLAVPRISVEPGRAIVGPTAFTLYEVGTIKPL 344 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + T + + D + +VG CE+GD + + Sbjct: 345 EGLRTYVSVDGGMSDNIRTALYDAEYSVALASRVSDAEPMLVRVVGKHCESGDIVVRDAF 404 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + PGDLL + TGAY + YN L P + V ++ R T ++L+ LD Sbjct: 405 LPADLAPGDLLAVPATGAYCRSMASNYNHALRPPVVAVRDGGARVVVRRETEEDLLRLDV 464 >gi|312622915|ref|YP_004024528.1| diaminopimelate decarboxylase [Caldicellulosiruptor kronotskyensis 2002] gi|312203382|gb|ADQ46709.1| diaminopimelate decarboxylase [Caldicellulosiruptor kronotskyensis 2002] Length = 433 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 123/422 (29%), Positives = 212/422 (50%), Gaps = 16/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSN 64 +G+L E + L L + TP Y + T I +N F ++ + G + ++ YA KA Sbjct: 12 KGNLSWEGIDLLDLIEMYGTPLYVMNETMIRENINIFKSSLNKYFGENGLIIYASKAFCT 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +A+ + G GLD+VS GEL AL+ ++I F G KT DE+++A++ G+ + Sbjct: 72 KAMCQIAKEEGIGLDVVSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVEKGVK-IVL 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL+ L+ + KKA + R+ P I A+TH+ I TG+ + KFG+ + + Sbjct: 131 DNFDELEMLSLICRTKNKKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSIV 190 Query: 185 ASTLPGVKISGV--DMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 L +++ V HIGSQI + F A +++ + ++++ G+ I+ +D+GGG G Sbjct: 191 QKVLQKEELNLVGLHCHIGSQIFETAPFKLAARVMLEFMLKIKNELGYEIKILDLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK 294 I Y + PP + +I + I+LEPGR +V + GI + + ++K Sbjct: 251 IKYTAHDEPPRVEKFIEVITEEVEEFCSLKGLKKPFIVLEPGRSIVGEAGITLYTIGNVK 310 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + + +V +D M D R LY A ++ + NP G R + I G CE+GD + Sbjct: 311 EIPNVRNYVSVDGGMTDNPRYALYQARYDAYVVENPLGQRTKV-YTIAGRCCESGDILIK 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ + G L I TGAY S YN +++ Q +I R T+++L+ Sbjct: 370 DIKLPELKTGQHLAILATGAYNYSMSSNYNRFPRPAVVLLKNGQARVIVKRETYEDLVRN 429 Query: 414 DS 415 D Sbjct: 430 DV 431 >gi|163939333|ref|YP_001644217.1| diaminopimelate decarboxylase [Bacillus weihenstephanensis KBAB4] gi|229132325|ref|ZP_04261179.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST196] gi|163861530|gb|ABY42589.1| diaminopimelate decarboxylase [Bacillus weihenstephanensis KBAB4] gi|228651031|gb|EEL07012.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST196] Length = 438 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 131/422 (31%), Positives = 191/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +E+ +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEMIMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+++ KFG + ++ A Sbjct: 132 NFLELEILHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR +++R H ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVRERTHYVMKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y +I +EPGR +V D G + V ++K+ Sbjct: 252 RYTDSDTPLTLETYVHAVTSTIREQFTLCEYPLPEIWVEPGRSIVGDAGTTLYTVGAVKE 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYGARYE-AMLANRGNDENEELVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL I TGAYG + YN + G I+ R T++ +I D Sbjct: 371 INLPQVASSDLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGND 430 Query: 415 SI 416 I Sbjct: 431 RI 432 >gi|206977595|ref|ZP_03238488.1| diaminopimelate decarboxylase [Bacillus cereus H3081.97] gi|222095152|ref|YP_002529212.1| diaminopimelate decarboxylase [Bacillus cereus Q1] gi|206744168|gb|EDZ55582.1| diaminopimelate decarboxylase [Bacillus cereus H3081.97] gi|221239210|gb|ACM11920.1| diaminopimelate decarboxylase [Bacillus cereus Q1] Length = 438 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 125/421 (29%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L ++LR + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEELRERTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 372 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|218437837|ref|YP_002376166.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7424] gi|218170565|gb|ACK69298.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7424] Length = 477 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 117/428 (27%), Positives = 178/428 (41%), Gaps = 19/428 (4%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQAV 67 L L L + +P Y + + AF + V YA KA S AV Sbjct: 45 LEIGGCDLSTLVNQFGSPLYILDEYTLRTACKQYREAFIKYYPGQSQVIYASKAWSCMAV 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVP-------AERIVFSGVGKTIDEIDLALQSGIY 120 +A G G D+VS GEL L A +I F G K++ E+ AL G Sbjct: 105 CAVIASEGLGFDVVSGGELYTTLQTLEQMGLGDDIATKIYFHGNNKSVTELQFALSVGCT 164 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 + A K I R+ P I +TH+ I TG ++KFG HQ+ + Sbjct: 165 IMVDNWLELETLVKLGANLGEKSVRIMLRLTPGIECHTHEYIRTGHLDNKFGFDPHQLEA 224 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + Y S G+ HIGSQI + + H +L + + G IQ ++VGGGL Sbjct: 225 VLTYVSEHSIFNCIGIHAHIGSQIFETQPHHDLAGVLVGYLKSAIAKGLPIQELNVGGGL 284 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISI 293 GI Y PP+ ++ + K+I EPGR L+ I V S Sbjct: 285 GIRYTEKDDPPAIEEWVKNVATAIVKACEAEQIPLPKLIAEPGRSLIGSACITAYTVGSR 344 Query: 294 KKSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K+ + +T++ +D M+D RP Y + + N I G CE+GD + Sbjct: 345 KEIPELRTYIAVDGGMSDNPRPITYQSLYRAII-ANRMSTPQSETVTIAGKHCESGDILI 403 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 + + PGD+L + TGAY + YN ++V+ + ++I R T+++L+ Sbjct: 404 KDALLPKAEPGDILVVMGTGAYNYSMASNYNRLPRPAAVLVHQGEANLILKRETYEDLLR 463 Query: 413 LDSIPAWL 420 D +P L Sbjct: 464 QDRLPDRL 471 >gi|312134674|ref|YP_004002012.1| diaminopimelate decarboxylase [Caldicellulosiruptor owensensis OL] gi|311774725|gb|ADQ04212.1| diaminopimelate decarboxylase [Caldicellulosiruptor owensensis OL] Length = 433 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 125/422 (29%), Positives = 204/422 (48%), Gaps = 16/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSN 64 +G+L E + L L V TP Y + T I +N F ++ G + ++ YA KA Sbjct: 12 KGNLSWEGIDLLDLIEVYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCT 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +A+ + G GLD+VS GEL AL+ +I F G KT DE+++A+ G+ + Sbjct: 72 KAMCRIAKEEGIGLDVVSGGELYTALSVNFEPNKIFFHGNNKTYDELEMAVDKGVK-IVL 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL L+ + KKA + R+ P I A+TH+ I TG+ + KFG+ + + Sbjct: 131 DNFDELDMLSLICKTKNKKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMV 190 Query: 185 ASTLPGVKISGV--DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGGGLG 241 L +++ V HIGSQI + F A +++ + +L++ I+ +D+GGG G Sbjct: 191 QKVLQKEELNLVGLHCHIGSQIFETAPFKLAARVMLEFMLKLKNELGCEIEILDLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK 294 I Y + PP + I + I+LEPGR +V + GI + + SIK Sbjct: 251 IKYTAHDEPPRIEKFIEAIAEEVEEFCSLRGLKKPFIVLEPGRSIVGEAGITLYTIGSIK 310 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + + +D M D R LY A ++ + NP G+R + I G CE+GD + Sbjct: 311 EIPKVRNYASVDGGMTDNPRYALYQARYDAYVVENPLGERTKV-YTIAGRCCESGDILIK 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ + G L I TGAY S YN +++ Q +I R T+++L+ Sbjct: 370 DIKLPELKTGQHLAILATGAYNYSMSSNYNRFPRPAVVLLKNGQAKVIVKRETYEDLVRN 429 Query: 414 DS 415 D Sbjct: 430 DV 431 >gi|229138209|ref|ZP_04266805.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST26] gi|228645241|gb|EEL01477.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST26] Length = 449 Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats. Identities = 125/421 (29%), Positives = 178/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 143 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR + +R + ++ ++VGGG GI Sbjct: 203 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEAVRERTNYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y +I +EPGR +V D G + V S+K Sbjct: 263 RYTESDTPLTLETYVRAVTSAVREQFTLCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 322 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDI 382 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 383 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 442 Query: 416 I 416 I Sbjct: 443 I 443 >gi|217958996|ref|YP_002337544.1| diaminopimelate decarboxylase [Bacillus cereus AH187] gi|217065258|gb|ACJ79508.1| diaminopimelate decarboxylase [Bacillus cereus AH187] Length = 438 Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats. Identities = 125/421 (29%), Positives = 178/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR + +R + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEAVRERTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTLCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 372 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|158333611|ref|YP_001514783.1| diaminopimelate decarboxylase [Acaryochloris marina MBIC11017] gi|158303852|gb|ABW25469.1| diaminopimelate decarboxylase [Acaryochloris marina MBIC11017] Length = 460 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 106/425 (24%), Positives = 175/425 (41%), Gaps = 12/425 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 G + + L +P Y + + +F + + YA KA S Sbjct: 35 GQMVIGGCLVTDLVKQFGSPLYIVDELTLRTACQQYRLSFQKFYPGPSQILYASKAWSCM 94 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ +A+ G GLD+VS GEL AL A V E I F G K++ E+++AL G Sbjct: 95 AISALVANEGLGLDVVSGGELYTALQAGVDPETIYFHGNNKSVPELEMALSCGCTIIADN 154 Query: 126 SESELKTLN--QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 + +L + R+ P I +TH+ I TG + KFG +QI + Sbjct: 155 WLELEQLTELLDTIDALPNPPRVMLRITPGIECHTHEYIRTGHLDSKFGFDPNQIDQALS 214 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +A P + G HIGSQI +++ ++ + + ++ G ++ +++GGGLGI Sbjct: 215 FAQKNPQITWVGFHAHIGSQIFELQPHQDLTSVIVEWLAKAQALGLSMNELNIGGGLGIR 274 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVISIKKS 296 Y PPS + ++ ++ K++ EPGR LV I V + K Sbjct: 275 YVESDDPPSIAQWSEIVCNGISQACQTANIPLPKLLCEPGRSLVGTSCITAYTVGAKKNI 334 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 D + + I N + G CE+GD + + Sbjct: 335 PDIRTYLSVDGGMSDNPRPITYQSVYSAAIANHMDSSATEIVTVAGKHCESGDVLLKDIP 394 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + +PGD+L + TGAY + YN ++V ++I R T+Q+LI D + Sbjct: 395 LPPSQPGDILVVMGTGAYNYSMASNYNRISRPAAVLVQNGDANLILKRETYQDLIRQDCL 454 Query: 417 PAWLQ 421 P L+ Sbjct: 455 PRHLE 459 >gi|150392021|ref|YP_001322070.1| diaminopimelate decarboxylase [Alkaliphilus metalliredigens QYMF] gi|149951883|gb|ABR50411.1| diaminopimelate decarboxylase [Alkaliphilus metalliredigens QYMF] Length = 433 Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats. Identities = 120/434 (27%), Positives = 202/434 (46%), Gaps = 13/434 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYA 58 M + +LA TP Y S I++ F +T YA Sbjct: 1 MEKQNENNKHFMFGGCNTVELAERYGTPLYVLSKEKIQERCKEIRETFLQKYENTKAAYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA A+ + + G GLD+VS GE+ A+ A P E+ +F G K+ +E+ LA++ G Sbjct: 61 SKAFLTMAMCRIIESEGLGLDVVSGGEIYTAVQAGFPMEKTMFHGNNKSFEELYLAVEHG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL+ L Q A GKK + FRV P + TH I TG+K+ KFGIP+ Sbjct: 121 VGRIIVDNLLELEMLQQIAKEQGKKVDVLFRVTPGVEGKTHAYIVTGQKDSKFGIPLQPE 180 Query: 179 HSL--YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHID 235 P +K+ G HIGSQ+ + +S+ A ++L +L + L+ + ++ Sbjct: 181 IIESAVKQTMESPYIKLKGFHFHIGSQLFENDSYTDATQVLVNLMKHLKDHLEFITEELN 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGILVTK 289 GGG GI Y + P +++ + II+EPGR++V + GI + + Sbjct: 241 TGGGFGIKYVDEAPRPLGYFTDAIMETIKDACEKVGLEVPTIIIEPGRWIVGEAGITLYR 300 Query: 290 VISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 + ++K+ D +D + D RP LY+A ++ ++ I I G CE+G Sbjct: 301 IGTVKEIPDVRTYASVDGGLPDNPRPALYNAKYDAVVANKIDEEKDQI-VTIAGKCCESG 359 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + + GDLL + TGAY + YN ++V+ + I+ R T+ Sbjct: 360 DILIWDLQAPQIQTGDLLAVLSTGAYNFSMASNYNRLPRPAVVLVDQGKAEIMVQRETYG 419 Query: 409 ELIELDSIPAWLQK 422 +L+ + +P L++ Sbjct: 420 DLLSREQMPNSLRR 433 >gi|239982304|ref|ZP_04704828.1| putative diaminopimelate decarboxylase [Streptomyces albus J1074] gi|291454149|ref|ZP_06593539.1| diaminopimelate decarboxylase [Streptomyces albus J1074] gi|291357098|gb|EFE84000.1| diaminopimelate decarboxylase [Streptomyces albus J1074] Length = 463 Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats. Identities = 119/420 (28%), Positives = 190/420 (45%), Gaps = 12/420 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L + + +LA TP + T + +AF G D V YA KA ++A Sbjct: 44 EDGVLTVGGLPVTRLAEEFGTPAFFLDETDFRARCRAWRDAF-GADADVFYAGKAFLSRA 102 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ L G LD+ S GEL AL A +PA RI F G KT EI A+++G+ ++S Sbjct: 103 VVRWLHEEGLNLDVCSGGELATALDAGMPAARIAFHGNNKTTAEIRRAVEAGVGRIVLDS 162 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAY 184 E+ + A LG + P+ RV + A+TH+ I+T ++ KFG+ + Sbjct: 163 FEEIVRVAHVADELGVRQPVQIRVTVGVEAHTHEFIATAHEDQKFGLALAGGQAAEAVRR 222 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A L G+++ G+ HIGSQI + F + + + L ++R + ID+GGGLGIA Sbjct: 223 ALKLDGLELIGIHSHIGSQIFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIA 282 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y SD P + A + + +I +EPGR +V + +V ++K Sbjct: 283 YTSDDDPREPHEIAKALGEIVTRECESAGLATPRISVEPGRAIVGPTAFTLYEVGTVKPL 342 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + T + + D + +VG CE+GD + + Sbjct: 343 EGLRTYVSVDGGMSDNIRTALYDAEYTVTLASRTSDAEPMLVRVVGKHCESGDIVVRDAF 402 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + PGDLL + TGAY + YN L P + V+ ++ R T ++L+ LD Sbjct: 403 LPADLAPGDLLAVPATGAYCRSMASNYNHALRPPVVAVDEGAARVVVRRETEEDLLRLDV 462 >gi|269836759|ref|YP_003318987.1| diaminopimelate decarboxylase [Sphaerobacter thermophilus DSM 20745] gi|269786022|gb|ACZ38165.1| diaminopimelate decarboxylase [Sphaerobacter thermophilus DSM 20745] Length = 441 Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats. Identities = 120/421 (28%), Positives = 185/421 (43%), Gaps = 13/421 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQA 66 G L V + +LA TP Y Y + + + AF+ V YA KA Sbjct: 13 GQLIIGGVPVSQLADEYGTPLYIYDEATLRQRADAYRQAFERHYPRARVVYAGKAYLATW 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 ++ L G LD+VS GEL A+ PAERIVF G KT +E+ LAL+ G+ +++ Sbjct: 73 LLPLLDEAGLWLDVVSGGELYLAVRGGFPAERIVFHGNNKTPEELALALELGVGEVVIDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAY 184 E++ L Q + RVNP ++A+TH+ TG + KFG+ I Sbjct: 133 HYEIELLAQLTAERQVALDVLLRVNPGVDAHTHEYRKTGIVDSKFGLLIQSGDAARAVER 192 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 +PG+++ G HIGSQI + E F +L ++R I GGG I Sbjct: 193 IRAVPGLRLRGYHAHIGSQIAETEPFATTINVLFAFAAEMRDRFGVVPDQISPGGGWAIP 252 Query: 244 YHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y SD + YA+ + +G + +EPGR +V G+ V +V +IK Sbjct: 253 YESDDPDAAIEPYAAAVAGSALQAAERWGFDPPVLTVEPGRSIVGPAGVAVYRVGAIKDI 312 Query: 297 ADKTFVIL-DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + D M D +RP LY A + H I G CE+GD + + Sbjct: 313 PGVRRYVCVDGGMADNIRPPLYGARYTAALANRDGAGSDHAVVTIAGKYCESGDVLIRDV 372 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ PGDLL + GAY + YN L + V + +++ R +++L+ + Sbjct: 373 ELPTVEPGDLLALPAAGAYCLAMASNYNLALRPAVVAVADGRARLVQRRERYEDLLAREV 432 Query: 416 I 416 + Sbjct: 433 V 433 >gi|22299304|ref|NP_682551.1| diaminopimelate decarboxylase [Thermosynechococcus elongatus BP-1] gi|22295487|dbj|BAC09313.1| diaminopimelate decarboxylase [Thermosynechococcus elongatus BP-1] Length = 450 Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats. Identities = 103/423 (24%), Positives = 159/423 (37%), Gaps = 11/423 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 G L + +L +P Y + +++V YA KA + Sbjct: 23 GHLTIGGCDVVELVAQFGSPLYILDEFTFRTACRQYQETLQRAYGGESLVLYASKAWNCL 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A G G+D+ S GEL AL+A VPA I F G K+ E+ AL+ Sbjct: 83 ATCALAHSEGLGIDVASGGELYTALSAGVPASHIYFHGNNKSPQELLYALEVNCTIVADN 142 Query: 126 SES-ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 E L + R+ P I +TH+ I TG + KFG Q L + Sbjct: 143 WLELERLAAYVEEHDLSTPPRVMLRLTPGIECHTHEYIRTGHLDSKFGFDPQQFPELLQF 202 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 A P + G+ HIGSQI + + +L D Q R+ ++ ++VGGGLGI Y Sbjct: 203 AKAHPELDWVGLHAHIGSQIFEEQPHLDLCDVLVDWLAQARAAMLPMRELNVGGGLGIRY 262 Query: 245 HSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 PP+ + + Q K+I EPGR +V + V S K Sbjct: 263 VESDNPPAIAHWIKAISHQLSQACQQRHLPLPKLICEPGRSIVGPAAVTAYTVGSRKVIP 322 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + I + N + G CE+GD + + + Sbjct: 323 ELRTYIAVDGGMSDNPRPMTYQAQYTALCANRMTTAATETVRVAGKHCESGDILLAHATL 382 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 + D+L + TGAY + YN ++V + ++I R T+ +L+ D +P Sbjct: 383 PPLQANDILVVASTGAYNYSMASNYNRVPRPAAVIVCDGEANLILQRETYADLVAHDVLP 442 Query: 418 AWL 420 L Sbjct: 443 LRL 445 >gi|333024412|ref|ZP_08452476.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071] gi|332744264|gb|EGJ74705.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071] Length = 465 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 124/420 (29%), Positives = 189/420 (45%), Gaps = 12/420 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 EG+L V + +LA TP Y + +AF G V YA KA ++A Sbjct: 46 EEGALSVGGVPVTRLAEEFGTPAYFLDEEDFRTRCRDWRSAF-GEGADVFYAGKAFLSRA 104 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ L G LD+ S GEL AL A +PA RI F G KT EI+ A+ +G+ V+S Sbjct: 105 VVRWLHEEGLNLDVCSGGELLTALDAGMPAARIAFHGNNKTAAEIERAVAAGVGRIVVDS 164 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAY 184 EL + A +LG+ + RV + A+TH+ I+T ++ KFG+ + Sbjct: 165 FQELVRVAHTAQALGRVQRVQIRVTVGVEAHTHEFIATAHEDQKFGLALAGGQAAEAVRR 224 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A TL G+++ G+ HIGSQI + F + + + L ++R + ID+GGGLGIA Sbjct: 225 ALTLDGIELVGIHSHIGSQIFDMAGFEVSARRVVGLLAEIRDEHGVELPEIDLGGGLGIA 284 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y SD P + A + +I +EPGR +V + +V +IK Sbjct: 285 YTSDDDPREPHEIAKALGDIVTRECESAGLAVPRISVEPGRAIVGPTAFTLYEVGTIKPL 344 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + T + + D + +VG CE+GD + + Sbjct: 345 EGLRTYVSVDGGMSDNIRTALYDAEYSVALASRTSDAAPMLVRVVGKHCESGDIVVRDAF 404 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + PGDLL + TGAY + YN L P + V Q ++ R T ++L+ LD Sbjct: 405 LPADLAPGDLLAVPATGAYCRSMASNYNHALRPPVVAVRDGQARVVVRRETEEDLLRLDV 464 >gi|34556768|ref|NP_906583.1| diaminopimelate decarboxylase dap decarboxylase [Wolinella succinogenes DSM 1740] gi|34482482|emb|CAE09483.1| DIAMINOPIMELATE DECARBOXYLASE DAP DECARBOXYLASE [Wolinella succinogenes] Length = 401 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 166/399 (41%), Positives = 226/399 (56%), Gaps = 4/399 (1%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + LA TP Y Y I+ +L AF G +++ YA+KANSN +VI+ L L Sbjct: 1 MDFSSLASRYGTPLYVYDFDQIKSQFLQLKEAFAGRKSLIAYAIKANSNLSVIQHLGKLE 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE++RAL A +P +I+FSGVGK +EI AL I NVESE+EL + Sbjct: 61 SGADCVSIGEVKRALKAGIPPYKIIFSGVGKRDEEILEALSLEILMINVESEAELLRVES 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A SLGK A I+ RVNPDI+ TH ISTG E+KFG+ I LY + + G Sbjct: 121 LAKSLGKVARISIRVNPDIDPKTHPYISTGLSENKFGVDIESAKRLYILCAKSESLHPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIGSQ+ ++E ++ K + DLT+ L + I+ DVGGGLGI Y + + D Sbjct: 181 IHFHIGSQLTELEPLLESAKKVADLTRSLLALKIEIKFFDVGGGLGIRYKDETPI-NLYD 239 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I+ EPGRF+V + G +T+V+ K++ K FVI+D AMND +RP+ Sbjct: 240 YAQGILAALHGLDVTIVCEPGRFIVGNAGCFLTRVLYEKQNEKKRFVIVDGAMNDLLRPS 299 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY AYHE P G ADIVGP+CE+GD++A + GDL+ I+ GAYG Sbjct: 300 LYKAYHEAF---APKGGESFSEADIVGPVCESGDWLAKGVMLPPLEHGDLIVIKSAGAYG 356 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YNSR E+ + G + +IR R + L + + Sbjct: 357 FSMSSQYNSRARAAEVALEGGESRLIRAREEIESLWQNE 395 >gi|15893897|ref|NP_347246.1| diaminopimelate decarboxilase, lisA [Clostridium acetobutylicum ATCC 824] gi|15023479|gb|AAK78586.1|AE007576_2 Diaminopimelate decarboxilase, lisA [Clostridium acetobutylicum ATCC 824] gi|325508024|gb|ADZ19660.1| Diaminopimelate decarboxilase, lisA [Clostridium acetobutylicum EA 2018] Length = 431 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 114/427 (26%), Positives = 198/427 (46%), Gaps = 15/427 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALK 60 + L+ +S ++LA TP Y + +N + F V YA K Sbjct: 6 SMHEENNELYIGGISSKELAKKYGTPLYVIDEKLVRQNCKEYYENFKVKEKKNRVAYAGK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A A+ + + G LD+VS GEL A A E ++F G KTIDE+++ ++ + Sbjct: 66 AFLPIAMCQIIKEEGLSLDVVSGGELYTAYKAGFNMENVLFHGNNKTIDEMEMGVRLNVG 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--I 178 F ++ E++ +N+ A +GK + R+ P I A+TH+ I TG+ + KFG + Sbjct: 126 RFVADNFYEIEKVNEIAKKMGKVQKVFLRITPGIEAHTHEYIKTGQIDSKFGFTLSNGDA 185 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVG 237 V++SG+ HIGSQI I + + +++ ++ + + I+ +D+G Sbjct: 186 LKAVKEVLNFQNVELSGLHCHIGSQIFDIAPYLEETRVMLAFIKEIQKETNYEIKELDLG 245 Query: 238 GGLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG GI Y +P + ++ A + G K+I+EPGR ++ + G + V Sbjct: 246 GGFGIYYTEVDKPRGAEEFCSAILKEAEESSKKLGVKLPKLIIEPGRSIIGNAGSTLYTV 305 Query: 291 ISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 SIK+ +D M D +RP+LY+A +E + I G CE+GD Sbjct: 306 GSIKEIQHMRKYVSVDGGMTDNIRPSLYNAEYECEIANKF--NASKEKVTISGKCCESGD 363 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + I+ GD+L + TGAYG S YN ++V+ + +I R T++ Sbjct: 364 ILINDVNISEVESGDILVVSTTGAYGYSMSNNYNKIPKAAVVLVSDGKERLICKRETYEH 423 Query: 410 LIELDSI 416 ++ + + Sbjct: 424 MLSNEIM 430 >gi|168182039|ref|ZP_02616703.1| diaminopimelate decarboxylase [Clostridium botulinum Bf] gi|237796776|ref|YP_002864328.1| diaminopimelate decarboxilase [Clostridium botulinum Ba4 str. 657] gi|182674869|gb|EDT86830.1| diaminopimelate decarboxylase [Clostridium botulinum Bf] gi|229260999|gb|ACQ52032.1| diaminopimelate decarboxilase [Clostridium botulinum Ba4 str. 657] Length = 428 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 118/424 (27%), Positives = 203/424 (47%), Gaps = 12/424 (2%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 + +L+ ++ LA +TP Y T I N + +F+ V YA KA Sbjct: 6 SMNIKNNNLYIGEINTLDLAKKFKTPLYVMDETLIRDNCRRYVTSFNKEKNKVAYAGKAF 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 +A+ + G LD+VS GE+ A + P +++ F G KT++EI++A+ G+ F Sbjct: 66 LTKAMCNLIKEEGLSLDVVSGGEIFTAYRSGFPMDKVYFHGNNKTMEEIEMAINLGVGTF 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI--HS 180 ++ EL +N + K + R+ P I A+TH+ I TG+ + KFG + Sbjct: 126 VADNFQELDKINNICKNKNIKQRVILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIK 185 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGG 239 A L ++ G HIGSQI + + + + +++ L ++ +I+ +D+GGG Sbjct: 186 AVKKAYELENIQFVGFHCHIGSQIFETKPYEEEIEIMLKLIKRTNEELNIDIEELDLGGG 245 Query: 240 LGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y P ++ A + G + +++EPGR +V + G+ + V S Sbjct: 246 FGIYYKEGDEPKKIEEFCKIILDKARSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGS 305 Query: 293 IKKSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK+ + ++ ++ M D +RP LY + +E N A D L +VG CE+GD + Sbjct: 306 IKEIPNVAKYIAVNGGMTDNIRPALYKSEYECVVC-NKALDNLLEEVKVVGKCCESGDIL 364 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 N K+ + DLL I TGAYG + YN LL + VN + ++ R +++ LI Sbjct: 365 IDNVKLPIVETDDLLAILNTGAYGYSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLI 424 Query: 412 ELDS 415 + + Sbjct: 425 QNEV 428 >gi|319944763|ref|ZP_08019027.1| exopolyphosphatase [Lautropia mirabilis ATCC 51599] gi|319742012|gb|EFV94435.1| exopolyphosphatase [Lautropia mirabilis ATCC 51599] Length = 430 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 167/398 (41%), Positives = 237/398 (59%), Gaps = 7/398 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 TP Y YS AIE + F+ A G D +C+A+KA+SN A++ A LG+G D+VS Sbjct: 36 EYGTPLYVYSRQAIEATWQRFAQALTGRDARICFAVKASSNLAILGLFAQLGAGFDVVSG 95 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GEL R +AA ++VFSGVGK+ DEI AL + I CFNVES EL+ +NQ A +GK+ Sbjct: 96 GELARVIAAGGDPRKVVFSGVGKSGDEIRQALAADIACFNVESLPELERINQIAGEMGKR 155 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 AP++ R+NPD++A TH ISTG KE+KFGIP Q + Y A+ LP ++I G+D HIGSQ Sbjct: 156 APVSLRINPDVDAATHPYISTGLKENKFGIPHSQALAAYRQAAALPHLQIHGIDCHIGSQ 215 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH---SDHRPPSSSDYASLI 260 I + F A + L QL + G I H+D+GGGLGI Y + Sbjct: 216 ITEASPFLAALDRVLALVDQLEAEGIAIGHLDLGGGLGIRYDNETPPTPEALMQALFDRL 275 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 Q+ + + E GR LV + G+L+T + +K + + F ++D AMND MRP LY AY Sbjct: 276 TQWRPDGLPGVTFEFGRALVGNAGLLLTCLEYLKDNEGQHFAVVDAAMNDLMRPALYQAY 335 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 H + + G+ + AD+VGP+CE+GD++A R +ALP P +L I GAYG+ + Sbjct: 336 HRVEVV--NPGNAPVVTADVVGPVCESGDWLARKRPLALP-PDAVLAILSAGAYGSTMAS 392 Query: 381 TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIP 417 YNSR E++++G H+IR R T +L+ + +P Sbjct: 393 NYNSRPRPAEVLIDGKHVHLIRERETMADLLRHEKRLP 430 >gi|229183714|ref|ZP_04310934.1| Diaminopimelate decarboxylase [Bacillus cereus BGSC 6E1] gi|228599757|gb|EEK57357.1| Diaminopimelate decarboxylase [Bacillus cereus BGSC 6E1] Length = 449 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 178/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 143 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L + +R + ++ ++VGGG GI Sbjct: 203 LALQKSNYNMLGIHSHIGSQIFETAGFVRAIEVLHQFLEGVRERTNYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 263 RYTESDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 322 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDI 382 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 383 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 442 Query: 416 I 416 I Sbjct: 443 I 443 >gi|229074708|ref|ZP_04207729.1| Diaminopimelate decarboxylase [Bacillus cereus Rock4-18] gi|229096010|ref|ZP_04226985.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-29] gi|229102122|ref|ZP_04232833.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-28] gi|229114964|ref|ZP_04244376.1| Diaminopimelate decarboxylase [Bacillus cereus Rock1-3] gi|228668476|gb|EEL23906.1| Diaminopimelate decarboxylase [Bacillus cereus Rock1-3] gi|228681322|gb|EEL35488.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-28] gi|228687395|gb|EEL41298.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-29] gi|228708451|gb|EEL60603.1| Diaminopimelate decarboxylase [Bacillus cereus Rock4-18] Length = 449 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 132/422 (31%), Positives = 192/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+++ KFG + ++ A Sbjct: 143 NFLELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIG 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 203 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRKFLEEVREQTNYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K+ Sbjct: 263 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTIYTVGSVKE 322 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYSARYE-AMLANRGNDENEELVSIAGKCCESGDMLIWD 381 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL I TGAYG + YN + G I+ R T++ +I D Sbjct: 382 INLPKVASSDLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGND 441 Query: 415 SI 416 I Sbjct: 442 RI 443 >gi|154151636|ref|YP_001405254.1| diaminopimelate decarboxylase [Candidatus Methanoregula boonei 6A8] gi|154000188|gb|ABS56611.1| diaminopimelate decarboxylase [Methanoregula boonei 6A8] Length = 430 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 154/427 (36%), Positives = 226/427 (52%), Gaps = 12/427 (2%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYAL 59 S +G LH + L TP Y S I +++ + +A V +A Sbjct: 5 SHITIRDGHLHIGSHDCVTLTAKYGTPLYVTSEDRICEHFTAYQSALSRRYAKVQVLFAA 64 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN N AV++ LA LG+G D+ S GEL AL A +PA +++F+G KT ++ LA++ G+ Sbjct: 65 KANGNLAVMRALARLGAGADVFSSGELALALEAGMPASKLLFNGSSKTPADLALAVKHGV 124 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 +++S EL L+ A + GK A I+FRVNP + TH KI+TG KFGIP QI Sbjct: 125 K-VSLDSLDELHQLDAIAANAGKVAEISFRVNPALEVPTHPKIATGLATSKFGIPHEQIP 183 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + Y A VK G+ HIGSQI + F +A +++ + +++ G ++ +D+GGG Sbjct: 184 AAYKEALACKNVKPVGIHCHIGSQILDVVPFARAAEVMVRIAKEISDIGVKLEFLDLGGG 243 Query: 240 L-GIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVIS 292 L +H P+ DYA+ + F + + +EPGRFLVAD +L+T+V S Sbjct: 244 LGIPYHHDTDPAPTPEDYAAAVMPVFLEGIEKAGITPSLWVEPGRFLVADSTVLLTRVNS 303 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K +A K F +D N +RP +YD+YHEI N A I GPICETGD +A Sbjct: 304 TK-AAHKRFANVDAGFNLLIRPAMYDSYHEIIV-ANRADAPHTTEYTITGPICETGDILA 361 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 +RK+ GDL+ + GAYG S YN R PEI+++G + ++R T +L Sbjct: 362 ADRKLPELAAGDLIAVLDAGAYGYAMSSQYNGRPRCPEILIHGKEETLMRRPETLADLTS 421 Query: 413 LDSIPAW 419 P W Sbjct: 422 AMVHPPW 428 >gi|238021782|ref|ZP_04602208.1| hypothetical protein GCWU000324_01685 [Kingella oralis ATCC 51147] gi|237866396|gb|EEP67438.1| hypothetical protein GCWU000324_01685 [Kingella oralis ATCC 51147] Length = 403 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 175/398 (43%), Positives = 236/398 (59%), Gaps = 5/398 (1%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +LA TP Y Y A+ + + AF G +VCYA+KAN N +VI+ A LGSG Sbjct: 7 PRLAAQYGTPLYVYHQAALTAAFAAYQTAFSGCQPLVCYAVKANGNLSVIRHFAQLGSGF 66 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ R LAA A +I+FSGVGKT E++ AL +GI CFNVES EL+ LN A Sbjct: 67 DTVSAGEIARVLAAGGDASKIIFSGVGKTEAEMEYALNAGIKCFNVESLPELERLNDVAG 126 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 LGK API+FR+NPD++A TH ISTG K +KFGI + Y A++LP +KI GVD Sbjct: 127 RLGKIAPISFRINPDVDAKTHPYISTGLKANKFGIAMRDAEQAYQRAASLPHIKIIGVDC 186 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ + A + L L +L + G +QH+D+GGG+GI Y + P YA Sbjct: 187 HIGSQLTDLSPLIAACERLIALIDKLSAQGIALQHLDLGGGVGIVYKDE-HTPDLHAYAQ 245 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + ++LEPGR LV + G+L+T+V +K +K FV++D AMND MRP LY Sbjct: 246 AVEPLLKARGLSLVLEPGRSLVGNAGVLLTRVEYVKHGEEKNFVVVDAAMNDLMRPALYQ 305 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH + + D I ADIVGPICETGDFI R+I + GD+L I GAY + Sbjct: 306 AYHAVENVSR--PDAPQITADIVGPICETGDFIGKERQIGAAQ-GDILAIRSAGAYASSM 362 Query: 379 SGTYNSRLLIPEIMVNG-SQFHIIRPRMTFQELIELDS 415 + YN+R E+M++ ++R R T +L+ + Sbjct: 363 ASNYNARCRAAEVMIDEQGNSRLVRRRETMDDLLATER 400 >gi|323339443|ref|ZP_08079725.1| diaminopimelate decarboxylase [Lactobacillus ruminis ATCC 25644] gi|323093154|gb|EFZ35744.1| diaminopimelate decarboxylase [Lactobacillus ruminis ATCC 25644] Length = 435 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 122/421 (28%), Positives = 189/421 (44%), Gaps = 14/421 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSN 64 +G L V KLA TP Y I+K F AF+ V YA KA S Sbjct: 11 EQGHLLIGGVDAVKLAEKYGTPLIAYDVKKIKKQIRGFKQAFEDAGVKYMVSYASKAFSA 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + + G G DIVS GEL AL +P ERI F G K DE+++A+ I V Sbjct: 71 LAMYQLINKYGLGCDIVSGGELYAALKGGMPPERIEFHGNNKLQDELEMAVDEKIGTVVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA- 183 ++ E+K L+ + RV P I A TH+ I TG+ KFG I + A Sbjct: 131 DNFREIKLLDHVLRRKHASIGVVLRVTPGIEAETHQYIMTGQSNSKFGFDIRSGQAEEAL 190 Query: 184 -YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLG 241 P + + G+ HIGSQI + F A + L ++ + + +++GGG G Sbjct: 191 QQLMKNPRMNLMGIHCHIGSQIFAVNGFLMAAEKLVEVLADWKKRFGYEADVLNLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y+ +P + ++ S I + + +II+EPGR +V + + + S K Sbjct: 251 IRYNDFDQPLPAEEFVSAIVERVKELVAKYELKMPEIIIEPGRAMVGEAATTLYTIGSRK 310 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 +D M D +RP LYDA++E P R + +VG CE+GD + Sbjct: 311 DVDGVCHFLAVDGGMGDNIRPALYDAHYEAYLADRPNALREQM-VTVVGKYCESGDVLVH 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + +PGD+L + TGAYG + YN + + ++ R T+ +++ Sbjct: 370 DCALPNTKPGDILAMPSTGAYGYTMASNYNRNPRPAVVFCEDGKSRLVVRRETYADMMAC 429 Query: 414 D 414 + Sbjct: 430 E 430 >gi|196047333|ref|ZP_03114547.1| diaminopimelate decarboxylase [Bacillus cereus 03BB108] gi|225863382|ref|YP_002748760.1| diaminopimelate decarboxylase [Bacillus cereus 03BB102] gi|196021844|gb|EDX60537.1| diaminopimelate decarboxylase [Bacillus cereus 03BB108] gi|225788611|gb|ACO28828.1| diaminopimelate decarboxylase [Bacillus cereus 03BB102] Length = 438 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 178/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L + +R + ++ ++VGGG GI Sbjct: 192 LALQKSNYNMLGIHSHIGSQIFETAGFVRAIEVLHQFLEGVRERTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 372 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|229084515|ref|ZP_04216790.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-44] gi|228698805|gb|EEL51515.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-44] Length = 449 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 132/422 (31%), Positives = 190/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQ 65 +G L +LA TP Y Y TAI + F AF G V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDETAIREKCRAFHRAFQESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + E++ L+ A GK I RV P + A+TH+ I+TG+ + KFG I ++ A Sbjct: 143 NFFEMEILHDLAEQYGKNVNILIRVTPGVEAHTHEYITTGQDDSKFGFGISTGQAMQAIQ 202 Query: 186 STLP--GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 L + G+ HIGSQI + F +A ++L +++R + ++VGGG GI Sbjct: 203 IALEKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHHFLEEIREQTSYVATVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y +I +EPGR +V D G + V ++K Sbjct: 263 RYTEADTPLTLETYVHAVTEVVREQFTKNNYPLPEIWIEPGRSIVGDAGTTIYTVGAVKD 322 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N + I G CE+GD + + Sbjct: 323 IPSIRKYVSVDGGMTDNLRPALYGARYE-AMLANRGRENAKEVVSIAGKCCESGDMLIWD 381 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ GDLL I TGAYG + YN + G ++ R T++ +I D Sbjct: 382 IELPQVISGDLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGND 441 Query: 415 SI 416 I Sbjct: 442 RI 443 >gi|254431387|ref|ZP_05045090.1| diaminopimelate decarboxylase [Cyanobium sp. PCC 7001] gi|197625840|gb|EDY38399.1| diaminopimelate decarboxylase [Cyanobium sp. PCC 7001] Length = 472 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 115/423 (27%), Positives = 185/423 (43%), Gaps = 11/423 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 +G L L LA TP Y + + +S A ++ YA KANS+ Sbjct: 47 KGRLQVGGCVLSDLARTFGTPLYVLDEATLRASCRAYSRALSQAYPGPSLALYASKANSS 106 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ +A G GLD VS GEL ALA +P ERIV G K+++E+ LA G+ Sbjct: 107 VAITALVAQEGLGLDAVSAGELLTALAGGMPPERIVLHGNNKSLEELALAADRGVT-VVA 165 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ +++ L + A L + + R P I +TH+ I TG + KFG Q+ ++ + Sbjct: 166 DNWRDIELLTELAPQLRQPVRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLETVLQH 225 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 + +++G+ HIGSQI +++ ++ D Q RS GH + ++VGGGLGI Y Sbjct: 226 LAACGWARLTGLHAHIGSQIFELQPHRDLAGVMADGLQLARSLGHPVTDLNVGGGLGIRY 285 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSA 297 PP+ D+ + + EPGR LVA G+ + V S K Sbjct: 286 VVSDDPPTIEDWVRTVAGAVAQACRDRNLELPRLLCEPGRSLVATAGLTLYTVGSRKTIP 345 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + + + + G + G CE+GD + + + Sbjct: 346 GLRTYLAVDGGMSDNPRPITYQSPYTAVLADRPGAEASETVTVAGKHCESGDVLLKDIAL 405 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 GDLL + TGAY A + YN ++V+ +++ R ++L+ D +P Sbjct: 406 PPATSGDLLAVFATGAYNASMASNYNRIPRPAAVLVHDGMADLVQRREQPEDLLRYDVLP 465 Query: 418 AWL 420 A L Sbjct: 466 ARL 468 >gi|148241889|ref|YP_001227046.1| diaminopimelate decarboxylase [Synechococcus sp. RCC307] gi|147850199|emb|CAK27693.1| Diaminopimelate decarboxylase [Synechococcus sp. RCC307] Length = 463 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 116/424 (27%), Positives = 186/424 (43%), Gaps = 11/424 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 +G L L +LA TP Y ++ + + A + ++ YA KANS+ Sbjct: 38 DGRLRVGECVLSELAQRFGTPLYVIDERSLRQACTAYREALERHYPGPSLAVYASKANSS 97 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ +A G GLD VS GEL AL +P ERIV G K+ +E+ LA+Q+G+ V Sbjct: 98 LAITAVVASEGLGLDAVSAGELLTALEGGMPPERIVLHGNNKSSEELALAVQNGVT-VVV 156 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ ++ L + A + + R P I +TH+ I TG + KFG Q+ + + Sbjct: 157 DNWHDITLLQELAQGRTEPVALMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEQVLTH 216 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 + ++ G+ HIGSQI ++E +L D R GH ++VGGGLGI Y Sbjct: 217 LAGCRWARVQGLHAHIGSQIFEVEPHRDLAAVLADALVLARRLGHEPSDLNVGGGLGIRY 276 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSA 297 + PPS + ++ + + + EPGR LVA G+ + V S K+ Sbjct: 277 VASDDPPSIDGWVQVVAEAMVAACRERNLELPRLLCEPGRSLVAPAGVTLYTVGSRKQIP 336 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 D + + + + G +VG CE+GD + + Sbjct: 337 DLNTYVAVDGGMSDNPRPITYQSEYTACLADRPGAEATETVTLVGKHCESGDVLLKQLPL 396 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 PGD+L + TGAY A + YN ++V +++ R EL+ D +P Sbjct: 397 PATEPGDVLVVLATGAYNASMASNYNRIPKPAAVLVADGCAELVQRRERPDELLRYDVLP 456 Query: 418 AWLQ 421 L+ Sbjct: 457 ERLR 460 >gi|294499104|ref|YP_003562804.1| diaminopimelate decarboxylase [Bacillus megaterium QM B1551] gi|294349041|gb|ADE69370.1| diaminopimelate decarboxylase [Bacillus megaterium QM B1551] Length = 442 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 121/421 (28%), Positives = 181/421 (42%), Gaps = 12/421 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQA 66 L +L TP Y Y IE F +AF + YA KA Sbjct: 13 NHLEIGQCDTVELKKQYGTPLYIYDQELIETKCKAFHSAFQRSGFSYQIAYAGKAFLCME 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + L L LD+VS GEL AL A PAERI F G KTI+EI++AL + I CF V++ Sbjct: 73 MANLLTKLDMSLDVVSGGELFTALEAGYPAERIHFHGNNKTIEEIEMALDANIGCFVVDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY-- 184 +EL+ L+ A +KA I RV P I A+TH+ I TG+++ KFG + ++ A Sbjct: 133 FTELEVLHALAAERKQKASILLRVTPGIEAHTHEYIMTGQEDSKFGFGLSNDQAMKAVSS 192 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A P + G+ HIGSQI +++ F +A +L D +R ++ ++VGGG GI Sbjct: 193 ALEKPYYNLLGIHCHIGSQIFEVDGFSRAIDILTDFLFNIRDKMDFEVKVLNVGGGFGIR 252 Query: 244 YHSDHRPPSSSDYASLIH-------QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y P Y + ++ +EPGR +V + G + + S K+ Sbjct: 253 YTESDSPLPVEYYVDALTEKLSRTLTEQNYTLPEVWIEPGRSIVGEAGTTLYTIGSTKEI 312 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + + N D+ I G CE+GD + + Sbjct: 313 PGVRKYVGIDGGMTDNIRPALYDAKHEAVLANRVTDKKDETVSIAGKCCESGDMLIWDID 372 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL + TGAY + YN + V + + R T+++L+ D Sbjct: 373 LPRVNQGDLLAVSSTGAYNYSMASNYNRIPRPAVVFVKNGEARLAVERETYEDLVRKDVK 432 Query: 417 P 417 P Sbjct: 433 P 433 >gi|302869606|ref|YP_003838243.1| diaminopimelate decarboxylase [Micromonospora aurantiaca ATCC 27029] gi|302572465|gb|ADL48667.1| diaminopimelate decarboxylase [Micromonospora aurantiaca ATCC 27029] Length = 461 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 113/419 (26%), Positives = 184/419 (43%), Gaps = 13/419 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G+L + + LA TP Y + + F AF D V YA KA +AV Sbjct: 44 GGALTVAGLDVRGLAAEYGTPAYVLDEDDLRERCREFRAAFP--DADVYYAGKAFLCRAV 101 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ +A G LD+ + GEL AL+A +P ERI F G K++ E+ A+ +G+ V+S Sbjct: 102 VRMIAEEGMFLDVCTGGELATALSAGMPPERIGFHGNNKSVAELTRAVDAGVGRIIVDSF 161 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 +E+ L++ A G + + RV + A+TH+ I+T ++ KFG + + A Sbjct: 162 TEIDRLSELARERGVRPKVLVRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAAAAAFKI 221 Query: 188 LPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAY 244 L ++ G+ HIGSQI F + + + L Q+R G + +D+GGG GIAY Sbjct: 222 LDEDVLELRGLHSHIGSQIFDASGFEVSARRVLALQSQIRDARGVELPELDLGGGFGIAY 281 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 + P S D A + + + +EPGR +V + + ++K Sbjct: 282 TTQDDPASPHDLAKRLRKIVDGECAAENLAVPHLSVEPGRAIVGPAVFTLYQAGTVKDVD 341 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T + N + A +VG CE+GD + + + Sbjct: 342 GLRTYVSVDGGMSDNIRTALYDASYSATLANRTSTAQPMLARVVGKHCESGDIVVKDEFL 401 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 +PGDL+ + TGAY + YN P + V + +I R T +L+ LD Sbjct: 402 PADVQPGDLVAVPGTGAYCRSMASNYNHVPRPPVVAVREGRARLIVRRETEDDLLALDV 460 >gi|330994277|ref|ZP_08318205.1| Diaminopimelate decarboxylase [Gluconacetobacter sp. SXCC-1] gi|329758744|gb|EGG75260.1| Diaminopimelate decarboxylase [Gluconacetobacter sp. SXCC-1] Length = 460 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 177/427 (41%), Positives = 255/427 (59%), Gaps = 9/427 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M A +G L E V L +A + TP + S + Y + AF G + +A Sbjct: 31 MHAM---DG-LVLEEVPLNTIADALGTPTWVMSAGTLRARYQRLATAFRATGRPVSIHFA 86 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN + AV++ LA G+G D+VS GEL+RAL A +PA RIVFSGVGKT+ E+ AL++G Sbjct: 87 VKANDHLAVLRVLAAQGAGADVVSGGELQRALMAGIPAARIVFSGVGKTMPEMQAALRAG 146 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I NVES EL+ L+ A + G +AP+A R+NPD++A TH KI+TG +KFGIP ++ Sbjct: 147 IAQINVESAEELELLSTVAQAEGLEAPVALRINPDVDAGTHAKITTGLATNKFGIPYNRA 206 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 LYA+A+TLPG++ G+ MHIGSQI +++ + A+ L DL + +R+ G +I+ +D GG Sbjct: 207 VDLYAHAATLPGIRPVGLAMHIGSQIVRMQPYRTAYARLADLVRAIRARGLHIEALDCGG 266 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK--KS 296 GLGI+Y + + A+ IH G L ++ +EPGR+L G+L++ VI K Sbjct: 267 GLGISYRDETEG-APEALAAAIHGELGGLGTRLAIEPGRWLAGPAGLLLSTVILRKRGYE 325 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 F++LD AMND MRP+LYDA+H I + +VGP+CE+GD +R Sbjct: 326 GMPPFLVLDAAMNDLMRPSLYDAWHGIIPLSARDAVAPAEQVHVVGPVCESGDTFGHDRT 385 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + G L + GAYG V S TYN+R L ++MV+G + +IR R EL DSI Sbjct: 386 LPHMDAGARLALLDCGAYGMVMSSTYNARPLAAQVMVDGGHWAVIRERQAITELWAADSI 445 Query: 417 PAWLQKT 423 P W+ +T Sbjct: 446 PPWVDET 452 >gi|229108976|ref|ZP_04238577.1| Diaminopimelate decarboxylase [Bacillus cereus Rock1-15] gi|296502092|ref|YP_003663792.1| diaminopimelate decarboxylase [Bacillus thuringiensis BMB171] gi|228674445|gb|EEL29688.1| Diaminopimelate decarboxylase [Bacillus cereus Rock1-15] gi|296323144|gb|ADH06072.1| diaminopimelate decarboxylase [Bacillus thuringiensis BMB171] Length = 438 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 122/421 (28%), Positives = 181/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIG 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 +A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 192 FALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N A D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 372 HLPKVAASDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|229144119|ref|ZP_04272534.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST24] gi|228639338|gb|EEK95753.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST24] Length = 438 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 122/421 (28%), Positives = 180/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIG 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N A D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 372 HLPKVAASDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|228907150|ref|ZP_04071012.1| Diaminopimelate decarboxylase [Bacillus thuringiensis IBL 200] gi|228852482|gb|EEM97274.1| Diaminopimelate decarboxylase [Bacillus thuringiensis IBL 200] Length = 438 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 130/422 (30%), Positives = 191/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIG 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 +A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 192 FALQKSNYNVLGIHSHIGSQIFETVGFVRAIEVLRQFLEKVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKD 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYSARYE-AMLANRGNDENEELVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 371 IHLPKVAASDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGND 430 Query: 415 SI 416 I Sbjct: 431 RI 432 >gi|126659265|ref|ZP_01730402.1| diaminopimelate decarboxylase [Cyanothece sp. CCY0110] gi|126619464|gb|EAZ90196.1| diaminopimelate decarboxylase [Cyanothece sp. CCY0110] Length = 464 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 115/434 (26%), Positives = 190/434 (43%), Gaps = 25/434 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSN 64 + L L+ L +P Y T + + + F ++ V YA KA S Sbjct: 37 QDHLEIGGCDLQTLVEQFGSPLYVLDETTLRTACSQYRDYFKTYYQGESQVIYASKAWSC 96 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRA--------LAAPVPAERIVFSGVGKTIDEIDLALQ 116 AV+ +A G D+VS GEL ++ AE+I F G K+ E+ A++ Sbjct: 97 LAVVGVIATENLGFDVVSGGELYTTKKSLTRLGYSSQEIAEKIYFHGNNKSEAELKEAIE 156 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 G + V LG+ PI R+ P I +TH+ I TG + KFG + Sbjct: 157 VGCTIIVDN-----WLELETLVQLGQSVPILIRITPGIECHTHEYIRTGHLDSKFGFDPN 211 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 Q+ +++ Y G+ HIGSQI + + +L + + + G N+ +++ Sbjct: 212 QLEAVFTYIKKHKIFDCRGLHAHIGSQIFERQPHQDLAGVLVEWLKIGKEYGLNLSQLNI 271 Query: 237 GGGLGIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 GGGLGI Y PPS ++ + ++I EPGR L+ + Sbjct: 272 GGGLGICYTEQDDPPSIEEWVKAVSEAVMKACKRCEIDLPQLIAEPGRSLIGSACVTAYT 331 Query: 290 VISIKKSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V S K+ + +T++ +D M+D RP Y + + + N ++ I G CE+G Sbjct: 332 VGSRKEIPELRTYIAVDGGMSDNPRPITYQSLYR-VALGNRMSAEINETVTIAGKHCESG 390 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + ++ PGD+L I TGAY + YN I+VN + ++I R T+ Sbjct: 391 DIVIKDAQLPQTHPGDILVIMGTGAYNYSMASNYNRLPRPAAIIVNQGEANLIVKRETYD 450 Query: 409 ELIELDSIPAWLQK 422 +LI+ D +P L + Sbjct: 451 DLIQQDCLPERLLR 464 >gi|229043260|ref|ZP_04190982.1| Diaminopimelate decarboxylase [Bacillus cereus AH676] gi|228726121|gb|EEL77356.1| Diaminopimelate decarboxylase [Bacillus cereus AH676] Length = 438 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 122/421 (28%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIG 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F A ++LR +++R + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVLAIEVLRQFLEEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N A D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 372 HLPKVAASDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|148381278|ref|YP_001255819.1| diaminopimelate decarboxilase [Clostridium botulinum A str. ATCC 3502] gi|153934190|ref|YP_001385655.1| diaminopimelate decarboxilase [Clostridium botulinum A str. ATCC 19397] gi|153936837|ref|YP_001389061.1| diaminopimelate decarboxilase [Clostridium botulinum A str. Hall] gi|148290762|emb|CAL84893.1| diaminopimelate decarboxylase [Clostridium botulinum A str. ATCC 3502] gi|152930234|gb|ABS35734.1| diaminopimelate decarboxilase [Clostridium botulinum A str. ATCC 19397] gi|152932751|gb|ABS38250.1| diaminopimelate decarboxilase [Clostridium botulinum A str. Hall] Length = 428 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 120/424 (28%), Positives = 204/424 (48%), Gaps = 12/424 (2%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 + +L+ ++ LA +TP Y T I N + +FD V YA KA Sbjct: 6 SMNIKNNNLYIGEINTLDLAKKFKTPLYVMDETLIRDNCRRYVTSFDKEKNKVAYAGKAF 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 +A+ + G LD+VS GE+ A + P +++ F G KTI+EI++A+ G+ F Sbjct: 66 LTKAMCNLIKEEGLSLDVVSGGEIFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTF 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI--HS 180 ++ EL +N + K + R+ P I A+TH+ I TG+ + KFG + Sbjct: 126 VADNFQELDKINNICKNKNIKQRVILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIK 185 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGG 239 AS L ++ G HIGSQI + + + + +++ L ++ +I+ +D+GGG Sbjct: 186 AVKKASELENIQFVGFHCHIGSQIFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGG 245 Query: 240 LGIAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y P ++ + + G + +++EPGR +V + G+ + V S Sbjct: 246 FGIYYKEGDEPKKIEEFCKIILDKTKSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGS 305 Query: 293 IKKSADK-TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK+ + ++ ++ M D +RP LY + +E N A D L +VG CE+GD + Sbjct: 306 IKEIPNIAKYIAVNGGMTDNIRPALYKSEYECVVC-NKALDNLLEEVKVVGKCCESGDIL 364 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 N K+ + DLL I TGAYG + YN LL + VN + ++ R +++ LI Sbjct: 365 IDNVKLPIVETDDLLAILNTGAYGYSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLI 424 Query: 412 ELDS 415 + + Sbjct: 425 QNEV 428 >gi|255523462|ref|ZP_05390431.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7] gi|296184745|ref|ZP_06853156.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7] gi|255512920|gb|EET89191.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7] gi|296050527|gb|EFG89950.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7] Length = 432 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 115/427 (26%), Positives = 199/427 (46%), Gaps = 14/427 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALK 60 + + +L+ +S LA TP Y + + + AF + + V YA K Sbjct: 6 SMEIKNNTLYIGKISTIDLARKFGTPLYVIDEALVREQCKRYYKAFNVEQGENRVAYAGK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A A+ + + G LD+VS GEL AL + P E++ F G KT++EI++ + G+ Sbjct: 66 AFLTLAMCQMINSEGLYLDVVSGGELYTALKSDFPMEKVYFHGNNKTLEEIEMGISLGVG 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQI 178 F V++ E+ +N A K I R+ P I A+TH I TG+ + KFG + H Sbjct: 126 RFVVDNFDEIDKINAVAKEKNKVQSILLRITPGIEAHTHDYIKTGQIDSKFGFTMLEHNT 185 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVG 237 + + L +++ G+ HIGSQI I+ + +++ + + ++ + ++ +D+G Sbjct: 186 MNAVKKSIELTNIELKGLHCHIGSQIFDIKPYEDEVEIMLSIVKSIKDEMGYELKELDLG 245 Query: 238 GGLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG GI Y P D+ A + + G K+++EPGR ++ + G + V Sbjct: 246 GGFGIYYKEGDTPQKIEDFCEIILSKAESVGKELGIKLPKLVIEPGRSIIGNAGSTLYTV 305 Query: 291 ISIKKSADKTFVIL-DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 SIK+ I D M D +RP LY+A +E + + G CE+GD Sbjct: 306 GSIKEIPGIRKYISVDGGMTDNIRPALYNAEYECVVADKVESE-FTERVSVAGKCCESGD 364 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + +I + GD++ + TGAYG S YN ++V + +I R F + Sbjct: 365 ILLNGIEIPEAKVGDIMVVLNTGAYGYSMSNNYNKIPKPAVVLVKDEEVKVICRRQNFDQ 424 Query: 410 LIELDSI 416 ++E + + Sbjct: 425 ILENEVL 431 >gi|218232998|ref|YP_002366201.1| diaminopimelate decarboxylase [Bacillus cereus B4264] gi|218160955|gb|ACK60947.1| diaminopimelate decarboxylase [Bacillus cereus B4264] Length = 438 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 121/421 (28%), Positives = 181/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF + YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQIAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREESMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIG 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 +A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 192 FALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N A D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 372 HLPKVAASDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|188586528|ref|YP_001918073.1| diaminopimelate decarboxylase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351215|gb|ACB85485.1| diaminopimelate decarboxylase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 438 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 119/430 (27%), Positives = 193/430 (44%), Gaps = 13/430 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT--MVCYALKANSN 64 +G+L L KLA TP I + + + YA KA + Sbjct: 9 EDGNLEIGGCDLVKLAQQYDTPLNILDEEHIRNKCRKYRRILEQYYPTTELAYAGKAFLS 68 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + K + G LD+VSEGEL A+ A P ++++F G KT E++ AL + V Sbjct: 69 TTICKIVEEEGLFLDVVSEGELFTAVQAGFPGDKLLFHGNNKTSRELEYALDCNVGRIVV 128 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA- 183 +S EL+ + + A + I FRV P I A+THK I TG+++ KFG + Q + A Sbjct: 129 DSFLELELIEKLAQKKSTRVQIYFRVKPGIEAHTHKYILTGQEDSKFGFSLRQDDIMKAV 188 Query: 184 -YASTLPGVKISGVDMHIGSQIDQIESFHKAFK-LLRDLTQQLRSNGHNIQHIDVGGGLG 241 +A + + G+ HIGSQI++ + + A K ++ L + ++I +D+GGG+G Sbjct: 189 NFAIKSSYIDLQGLHCHIGSQINESKPYRLAAKTMMELLISIQKIYNYSISELDLGGGMG 248 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK 294 I Y SD + I Q ++ K+I EPGR ++ + G+++ +V IK Sbjct: 249 IKYRSDDSKLDIDSLMNEISQLILDMAKDSKIELPKLIFEPGRSIIGEAGVMLYRVGVIK 308 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + + + N A + +VG ICE+GD + N Sbjct: 309 EIPGIRNYVSVDGGMSDNIRPALYGAEYSAVVANKANYPHNNSYTVVGKICESGDVLLQN 368 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + PGDLL + GAY S YN ++VN Q +I R + +++I+ Sbjct: 369 IDLVDNLTPGDLLTVFSCGAYTYSMSSNYNRLPKPAVVLVNQGQADLIVRRESLEDVIQN 428 Query: 414 DSIPAWLQKT 423 D IP ++ Sbjct: 429 DLIPERFRRN 438 >gi|229160470|ref|ZP_04288465.1| Diaminopimelate decarboxylase [Bacillus cereus R309803] gi|228622880|gb|EEK79711.1| Diaminopimelate decarboxylase [Bacillus cereus R309803] Length = 438 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 180/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+++ KFG + ++ A Sbjct: 132 NFLELEILHDLAVQHGKFVNIIIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTDSDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGDDANEELVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + G I+ R T++ +I D Sbjct: 372 HLPKVASSDLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|30019568|ref|NP_831199.1| diaminopimelate decarboxylase [Bacillus cereus ATCC 14579] gi|229126834|ref|ZP_04255846.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-Cer4] gi|29895112|gb|AAP08400.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 14579] gi|228656774|gb|EEL12600.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-Cer4] Length = 438 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 122/421 (28%), Positives = 180/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEGSIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIG 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N A D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 372 HLPKVAASDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|222528796|ref|YP_002572678.1| diaminopimelate decarboxylase [Caldicellulosiruptor bescii DSM 6725] gi|222455643|gb|ACM59905.1| diaminopimelate decarboxylase [Caldicellulosiruptor bescii DSM 6725] Length = 433 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 123/421 (29%), Positives = 212/421 (50%), Gaps = 16/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSN 64 +G+L E + L L + TP Y + T I +N F + + G + ++ YA KA Sbjct: 12 KGNLSWEGIDLLDLIEMYGTPLYVMNETMIRENINIFKTSLNKYFGENGLIIYASKAFCT 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +A+ + G GLD+VS GEL AL+ ++I F G KT DE+++A++ G+ + Sbjct: 72 KAMCQIAKEEGIGLDVVSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVEKGVK-IVL 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL+ L+ + KKA + R+ P I A+TH+ I TG+ + KFG+ + + Sbjct: 131 DNFDELEMLSLICRTKNKKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSIV 190 Query: 185 ASTLPGVKISGV--DMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 L +++ V HIGSQI + F A +++ + ++++ G+ I+ +D+GGG G Sbjct: 191 QKVLQKEELNLVGLHCHIGSQIFETAPFKLAARVMLEFMLKIKNELGYEIKILDLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK 294 I Y + PP + +I + I+LEPGR +V + GI + + ++K Sbjct: 251 IKYTAHDEPPRVEKFIEVITEEVEEFCSLKGLKKPFIVLEPGRSIVGEAGITLYTIGNVK 310 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + + +V +D M D R LY A ++ + NP G R + I G CE+GD + Sbjct: 311 EIPNVRNYVSVDGGMTDNPRYALYQARYDAYVVENPLGQRTKV-YTIAGRCCESGDILIK 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ + G L I TGAY S YN +++ Q +I R T+++L++ Sbjct: 370 DIKLPELKTGQHLAILATGAYNYSMSSNYNRFPRPAVVLLKNGQARVIVKRETYEDLVKN 429 Query: 414 D 414 D Sbjct: 430 D 430 >gi|283955739|ref|ZP_06373230.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 1336] gi|283792694|gb|EFC31472.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 1336] Length = 402 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 159/399 (39%), Positives = 233/399 (58%), Gaps = 3/399 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + ++L TPFY Y+ I++ +L AF + + YA+KANSN ++++ A+L Sbjct: 1 MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMFANLD 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE++RAL A A +I+FSGVGKT +E+ AL+ I N+ESE+E+ L Sbjct: 61 SGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLES 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L KA I+ RVNP+++A TH ISTG E+KFG+ I +Y YA ++ G Sbjct: 121 VAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEIDTARKMYLYAKNSSFLEPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQ+ I H+A ++ L ++L++ +++ D+GGGLG+AY D Sbjct: 181 VHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECEVDLYS 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA + L I +EPGR+LVA G V V+ K++ K FV++D AMND +RP+ Sbjct: 241 YAQGVLAQLHGLDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYHEI N A + D+VG ICE+GDF A R + + GD++ I+ TGAYG Sbjct: 301 LYEAYHEIILPYNQAQES---LCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYG 357 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + E+ + Q +IR R F++ I L+ Sbjct: 358 FSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQIALE 396 >gi|229149719|ref|ZP_04277949.1| Diaminopimelate decarboxylase [Bacillus cereus m1550] gi|228633750|gb|EEK90349.1| Diaminopimelate decarboxylase [Bacillus cereus m1550] Length = 438 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 122/421 (28%), Positives = 181/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREESMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIG 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 +A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 192 FALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N A D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 372 HLPKVAASDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|146295969|ref|YP_001179740.1| diaminopimelate decarboxylase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409545|gb|ABP66549.1| diaminopimelate decarboxylase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 433 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 127/421 (30%), Positives = 213/421 (50%), Gaps = 16/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSN 64 +G+L E + L L + TP Y + I +N F NA + G + +V YA KA Sbjct: 12 KGNLSWEGIDLLDLIEMYGTPLYVMNERMIRENINRFKNALEKYFGQNGLVIYASKAFCT 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +A+ + GLD+VS GEL AL+ P ++I F G KT DE+++A+++G+ + Sbjct: 72 KAMCQIAKQEEIGLDVVSGGELFTALSVDFPTDKIFFHGNNKTYDELEMAVENGVK-IVI 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLY 182 ++ EL+ L+ + KKA + RV P I A+TH+ I TG+ + KFG+ + S+ Sbjct: 131 DNFDELEMLSVICKTKSKKANVLIRVKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMV 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLG 241 + +K+ G+ HIGSQI + F A +++ + + R + I +D+GGG G Sbjct: 191 KKILEMDELKLIGLHCHIGSQIFETAPFKLAARVMLEFILKIKRELNYEIDILDLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIK 294 I Y + +PP + I + + I+LEPGR +V + GI + + SIK Sbjct: 251 IKYTAFDQPPQIEKFIEAISEEIEEFCQQKELKKPFIVLEPGRSIVGEAGITLYTIGSIK 310 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + + + +D M D R LY A ++ + NP G+++ + I G CE+GD + Sbjct: 311 EIPNVRNYASVDGGMTDNPRYALYQAKYDAYVVENPIGEKVKV-YTIAGRCCESGDILIK 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ + G L I TGAY S YN +++ SQ +I R T+++++ Sbjct: 370 DIKLPELKTGQHLAILATGAYNYSMSSNYNRFPRPAVVLLKDSQVRVIVKRETYEDIVRN 429 Query: 414 D 414 D Sbjct: 430 D 430 >gi|229189600|ref|ZP_04316615.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 10876] gi|228593864|gb|EEK51668.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 10876] Length = 438 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 129/422 (30%), Positives = 190/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREESMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--A 183 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIR 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 +A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 192 FAVQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYSARYE-AMLANRGNDENEELVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 371 IHLPKVAASDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGND 430 Query: 415 SI 416 I Sbjct: 431 RI 432 >gi|307151051|ref|YP_003886435.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7822] gi|306981279|gb|ADN13160.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7822] Length = 476 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 110/433 (25%), Positives = 174/433 (40%), Gaps = 18/433 (4%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQAV 67 L + L +P Y + + AF + V YA KA S AV Sbjct: 45 LEIGGCEISTLVQQYGSPLYILDEFTLRTACQQYREAFKKYYPGQSQVIYASKAWSCMAV 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPA------ERIVFSGVGKTIDEIDLALQSGIYC 121 +A G G D+VS GEL L ++ Sbjct: 105 CAIIASEGLGFDVVSGGELYTTLQTLEQMGLDQEIATKIYFHGNNKSKSELNFALDSGCT 164 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V++ EL+TL + + K I R+ P I +TH+ I TG + KFG HQ+ ++ Sbjct: 165 IIVDNWLELETLVKLGGNRSKSIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPHQLEAV 224 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y S P G+ HIGSQI + + + +L + G I+ +++GGGLG Sbjct: 225 LTYVSENPVFNCIGLHAHIGSQIFETQPHYDLAAVLVSCMKAALERGLPIEELNIGGGLG 284 Query: 242 IAYHSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y PP+ + + Q K++ EPGR L+ + V S K Sbjct: 285 IRYTEKDDPPTIEAWVKNVATALSEACQAQQIPLPKLMAEPGRSLIGSACVTAYTVGSRK 344 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + D +T++ +D M+D RP Y + + N I G CE+GD + Sbjct: 345 EIPDLRTYIAVDGGMSDNPRPITYQSLYRAII-ANKMSSAATETVTIAGKHCESGDILIK 403 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + PGD+L + TGAY + YN ++VN + ++I R T+++++ Sbjct: 404 EALLPKTEPGDILVVMGTGAYNYSMASNYNRLSRPAAVLVNEGEANLILQRETYEDVLRC 463 Query: 414 DSIPAWLQKTPKQ 426 D +P L P + Sbjct: 464 DRLPEKLANFPNK 476 >gi|206968100|ref|ZP_03229056.1| diaminopimelate decarboxylase [Bacillus cereus AH1134] gi|206737020|gb|EDZ54167.1| diaminopimelate decarboxylase [Bacillus cereus AH1134] Length = 438 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 130/422 (30%), Positives = 191/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREESMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIG 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 +A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 192 FALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYSARYE-AMLANRGNDENEELVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 371 IHLPKVAASDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGND 430 Query: 415 SI 416 I Sbjct: 431 RI 432 >gi|322807653|emb|CBZ05228.1| diaminopimelate decarboxylase [Clostridium botulinum H04402 065] Length = 428 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 120/424 (28%), Positives = 204/424 (48%), Gaps = 12/424 (2%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 + +L+ ++ LA +TP Y T I N + +FD V YA KA Sbjct: 6 SMNIKNNNLYIGEINTLDLAKKFKTPLYVMDETLIRDNCRRYITSFDKEKNKVAYAGKAF 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 +A+ + G LD+VS GE+ A + P +++ F G KTI+EI++A+ G+ F Sbjct: 66 LTKAMCNLIKEEGLSLDVVSGGEIFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTF 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI--HS 180 ++ EL +N + K + R+ P I A+TH+ I TG+ + KFG + Sbjct: 126 VADNFQELDKINNICKNKNIKQRVILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIK 185 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGG 239 AS L ++ G HIGSQI + + + + +++ L ++ +I+ +D+GGG Sbjct: 186 AVKKASELENIQFVGFHCHIGSQIFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGG 245 Query: 240 LGIAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y P ++ + + G + +++EPGR +V + G+ + V S Sbjct: 246 FGIYYKEGDEPKKIEEFCKIILDKTKSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGS 305 Query: 293 IKKSADK-TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK+ + ++ ++ M D +RP LY + +E N A D L +VG CE+GD + Sbjct: 306 IKEIPNIAKYIAVNGGMTDNIRPALYKSEYECVVC-NKALDNLLEEVKVVGKCCESGDIL 364 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 N K+ + DLL I TGAYG + YN LL + VN + ++ R +++ LI Sbjct: 365 IDNVKLPIVETDDLLAILNTGAYGYSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLI 424 Query: 412 ELDS 415 + + Sbjct: 425 QNEV 428 >gi|28212040|ref|NP_782984.1| diaminopimelate decarboxylase [Clostridium tetani E88] gi|28204483|gb|AAO36921.1| diaminopimelate decarboxylase [Clostridium tetani E88] Length = 432 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 121/424 (28%), Positives = 206/424 (48%), Gaps = 14/424 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKA 61 + + +L+ VS ++L + TP Y + + N F + V YA K+ Sbjct: 7 MEVKDNNLYIGGVSCKELKNKYSTPLYIIDEDFLRGRCKEYYNNFGVEKHGNKVAYAGKS 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 A+ + + G LD+VS GEL AL A P +I F G KT+DEI++ ++ G+ Sbjct: 67 FLTIAMCQIIKEEGLFLDVVSSGELYTALKANFPMNKIYFHGNNKTLDEIEMGIELGVGK 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F V++ E+ +N A G K I R+ P I A+TH I TG+ + KFG + Sbjct: 127 FVVDNFYEMNNINNMARKKGIKQSILLRITPGIEAHTHDYIKTGQVDSKFGFSMVGEEVY 186 Query: 182 YA--YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGG 238 A A +LP + +SG+ HIGSQI + + +A ++ ++ +++++ + I +D+GG Sbjct: 187 KAVETALSLPNINLSGIHCHIGSQIFETTPYEEAVDIMFEILKEIKNRYDYEISEVDLGG 246 Query: 239 GLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 G GI Y + +P + +Y A + G + +EPGR ++ + L+ + Sbjct: 247 GFGIYYTKEDKPKETKEYCEAILKKALNKSKELGIKLPMLGIEPGRSIIGNAATLIYTIG 306 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 +IK+ +D MN+ +RP LYDA +E N D I G CETGD Sbjct: 307 AIKEIPGIRKYVSIDGGMNNNIRPALYDAKYECEVANNMNSD-DRELVTIAGKCCETGDI 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + +I+ + GD+L I GAYG S YN ++V + ++ R +F ++ Sbjct: 366 VIEDVEISKSKSGDILAIPSVGAYGYSMSSNYNKIPKPAIVLVKDGESRVMCKRESFDDM 425 Query: 411 IELD 414 ++ + Sbjct: 426 LKNE 429 >gi|220910057|ref|YP_002485368.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7425] gi|219866668|gb|ACL47007.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7425] Length = 458 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 115/424 (27%), Positives = 185/424 (43%), Gaps = 13/424 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 +G L + L +P Y T + + + D V YA KA + Sbjct: 36 QGHLVIGGCDVVDLVEQFGSPLYILDETTLRQGCQHYQQGMKQFYPGDFQVLYASKAWNC 95 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A +A G G+D+ S GEL AL A V ++I F G K++ E++LAL +G Sbjct: 96 LATCAIVASEGLGIDVASGGELYTALQAGVNPDKIYFHGNNKSLTELELALGNGCA-IVA 154 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL+ L A + R+ P I +TH+ I TG ++KFG +Q+ L + Sbjct: 155 DNWLELQRLATLADQFPSPPRVMLRLTPGIECHTHEYIRTGHLDNKFGFDPNQLEPLLEF 214 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 AS P + G HIGSQI +++ +L D Q ++ G + ++VGGGLGI Y Sbjct: 215 ASKHPQIHWLGFHAHIGSQIFELQPHTDLSAVLVDWLVQAKAAGLGMNELNVGGGLGIRY 274 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSA 297 +PPS +++ + + EPGR LV G+ ++ K Sbjct: 275 LESDQPPSITEWVKTVTTGIIAACQSRNLPLPKLLCEPGRSLVGPAGLTAYRMGGRKDVP 334 Query: 298 DKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + +D M+D RP Y A + N L I G CE+GD + + + Sbjct: 335 GIRTYVAVDGGMSDNPRPITYQAVYRAVV-GNHMAAPLAETVTIAGKHCESGDVLIKDIQ 393 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + +P D+ + TGAY + YN ++V + ++I R T+ +L+ D + Sbjct: 394 LPATQPDDIFVVLTTGAYNYSMASNYNRLTRPAAVLVKEGEANLILRRETYSDLLRQDVL 453 Query: 417 PAWL 420 P L Sbjct: 454 PQRL 457 >gi|78776669|ref|YP_392984.1| diaminopimelate decarboxylase [Sulfurimonas denitrificans DSM 1251] gi|78497209|gb|ABB43749.1| diaminopimelate decarboxylase [Sulfurimonas denitrificans DSM 1251] Length = 403 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 156/400 (39%), Positives = 231/400 (57%), Gaps = 3/400 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 ++ ++LA +TP Y Y + Y +AF G +++ +A+K+NSN +VIK A LG Sbjct: 2 INFKELAATYKTPLYVYDLDYMSAQYEELKSAFKGRKSIMAFAIKSNSNLSVIKHFATLG 61 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE+ RA+ A VP +I+FSGVGK+ DEI A++ I NVESE+EL + Sbjct: 62 SGADCVSIGEVYRAVLAGVPNYKIIFSGVGKSDDEITQAIKLDILYINVESEAELGRVEL 121 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A LG K I+ RVNP+I+ TH ISTG ++KFG+ I +Y A+ + G Sbjct: 122 IAKELGAKCRISIRVNPNIDPQTHPYISTGLHDNKFGVEIDTAKRMYIKANNSEYLDPVG 181 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIGSQ+ +++ +++ +++ DL + L++ ++ D+GGGLG+ Y + + D Sbjct: 182 IHFHIGSQLTELKPIYESAEIVADLVRSLQNIKIELKFFDIGGGLGVKYKDETTI-TPYD 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L +I EPGRFL A+ G +TKV+ K++ DK FV++D MND +RP+ Sbjct: 241 YAQAILSTLKGLDLTVICEPGRFLTANGGYFLTKVLYEKRNGDKRFVVVDGGMNDLLRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY AYH+I I AD+VGP+CE+GDF A + DLL I GAYG Sbjct: 301 LYKAYHKIEAITESLTKLSE--ADVVGPVCESGDFFAKGYLLPTLEHNDLLVIHSAGAYG 358 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 YN+R E+ + G + +IR R F++LI L+ Sbjct: 359 FGMGSNYNTRGRSAEVAIKGKEVKLIRKREEFEDLIALEK 398 >gi|86151380|ref|ZP_01069595.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 260.94] gi|86153859|ref|ZP_01072062.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13] gi|157414611|ref|YP_001481867.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 81116] gi|315123882|ref|YP_004065886.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841727|gb|EAQ58974.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 260.94] gi|85842820|gb|EAQ60032.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13] gi|157385575|gb|ABV51890.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 81116] gi|307747251|gb|ADN90521.1| Diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni M1] gi|315017604|gb|ADT65697.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315931609|gb|EFV10575.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 327] Length = 402 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 162/399 (40%), Positives = 235/399 (58%), Gaps = 3/399 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + ++L TPFY Y+ I++ +L AF + + YA+KANSN ++++ LA+L Sbjct: 1 MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLD 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE++RAL A A +I+FSGVGKT +E+ AL+ I N+ESE+E+ L Sbjct: 61 SGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLES 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L KA I+ RVNP+++A TH ISTG E+KFG+ I +Y YA ++ G Sbjct: 121 VAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQ+ I H+A ++ L ++L++ +++ D+GGGLG+AY D P + Sbjct: 181 VHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECEPDLYN 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I +EPGR+LVA G V V+ K++ K FV++D AMND +RP+ Sbjct: 241 YAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYHEI N A + D+VG ICE+GDF A R + + GD++ I+ TGAYG Sbjct: 301 LYEAYHEIILPYNQAQES---LCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYG 357 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + E+ + Q +IR R F+ I L+ Sbjct: 358 FSMSSNYNTRNKVCELALEEGQVRLIRQRENFENQIALE 396 >gi|56751260|ref|YP_171961.1| diaminopimelate decarboxylase [Synechococcus elongatus PCC 6301] gi|81299073|ref|YP_399281.1| diaminopimelate decarboxylase [Synechococcus elongatus PCC 7942] gi|56686219|dbj|BAD79441.1| diaminopimelate decarboxylase [Synechococcus elongatus PCC 6301] gi|81167954|gb|ABB56294.1| diaminopimelate decarboxylase [Synechococcus elongatus PCC 7942] Length = 464 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 117/425 (27%), Positives = 191/425 (44%), Gaps = 13/425 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 +G L + L +P Y + ++ +A + YA KA + Sbjct: 41 DGQLEVGGCRVSDLVERYGSPLYILDEQTLRAACQSYRSALAHHYPGAALPIYASKAWNC 100 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 AV +A G G+D+VS GEL AL A VP++R+ F G K++ E+ + +++G V Sbjct: 101 LAVCALVAQEGLGIDVVSAGELYTALQAGVPSDRLYFHGNNKSLSELAMGVEAGCT-IVV 159 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL+ L A ++ + R P I +TH+ I TG + KFG Q+ +L A Sbjct: 160 DNWQELRNLEAIAAEQQREVRVMIRFTPGIECHTHEYIRTGHLDSKFGFDPDQLDALLAA 219 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 P ++ G+ HIGSQI +++ +L + + G I ++VGGGLGI Y Sbjct: 220 LVDQPYLRCIGLHAHIGSQIFELQPHADLAGVLVGAYAKALALGLPIAELNVGGGLGIRY 279 Query: 245 HSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 PPS ++ + Q K+I EPGR L+ + ++ S K+ Sbjct: 280 TESDDPPSIDEWVRQVSESLVAACQAADLPLPKLICEPGRSLIGTACVTAYQIGSRKEVP 339 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +D M+D RP Y + + N + G CE+GD + + + Sbjct: 340 GIRTYLAVDGGMSDNPRPITYQSTYRAVI-ANRLNVSDRETVTVAGKHCESGDVLLKDAE 398 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +A +PGD+L + TGAY + YN ++VN + II R + Q+L+ D + Sbjct: 399 LAPSQPGDILVVLATGAYNYSMASNYNRIARPAAVLVNNGEAQIILARESLQDLLRQDRL 458 Query: 417 PAWLQ 421 P LQ Sbjct: 459 PVGLQ 463 >gi|283955208|ref|ZP_06372709.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 414] gi|283793245|gb|EFC32013.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 414] Length = 402 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 160/399 (40%), Positives = 237/399 (59%), Gaps = 3/399 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + ++L TPFY Y+ +I++ +L +AF + + YA+KANSN ++++ LA+L Sbjct: 1 MDYKQLRQEFNTPFYIYNFDSIKERFLNLKDAFKARKSQIFYAVKANSNLSLLQMLANLD 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE++R L A A +I+FSGVGKT +E+ LAL+ I N+ESE+E+ L Sbjct: 61 SGFDCVSIGEVKRVLKAGAKAYKIIFSGVGKTKEELKLALEYDILYINLESEAEMMLLES 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L KA I+ RVNP+++A TH ISTG E+KFG+ I +Y YA ++ G Sbjct: 121 VAKELRLKARISIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQ+ I H+A ++ L ++L++ +++ D+GGGLG+AY D P + Sbjct: 181 VHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECEPDLYN 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I +EPGR+LVA G V V+ K++ K F+++D AMND +RP+ Sbjct: 241 YAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFIVVDGAMNDLIRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYHEI N + D+VG ICE+GDF A R + + GD++ ++ TGAYG Sbjct: 301 LYEAYHEIVLPYNQS---EENLCDVVGGICESGDFFAKARSLPSTQSGDIMVVKNTGAYG 357 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + E+ + Q +IR R FQ+ I L+ Sbjct: 358 FSMSSNYNTRNKVCELALEEGQVRLIRQRENFQDQIALE 396 >gi|312876367|ref|ZP_07736352.1| diaminopimelate decarboxylase [Caldicellulosiruptor lactoaceticus 6A] gi|311796861|gb|EFR13205.1| diaminopimelate decarboxylase [Caldicellulosiruptor lactoaceticus 6A] Length = 433 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 206/421 (48%), Gaps = 16/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSN 64 +G+L E + L L + TP Y + T I +N F ++ G + ++ YA KA Sbjct: 12 KGNLSWEGIDLLDLIEMYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCT 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +A+ + G GLD+VS GEL AL+ ++I F G KT DE+++A++ G+ + Sbjct: 72 KAMCQIAKEEGIGLDVVSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVEKGVK-IVL 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL+ L+ + KKA + R+ P I A+TH+ I TG+ + KFG+ + + Sbjct: 131 DNFDELEMLSLICKTKNKKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMV 190 Query: 185 ASTLPGVKISGV--DMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 L ++S V HIGSQI + F A +++ + ++++ G + +D+GGG G Sbjct: 191 QKVLQRQELSLVGLHCHIGSQIFETAPFKLAARVMLEFMLKIKNELGWQVDILDLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK 294 I Y + PP + I + I+LEPGR +V + GI + + SIK Sbjct: 251 IKYTAHDEPPKIEKFIEAIAEEVEEFCSLRGLKKPFIVLEPGRSIVGEAGITLYTIGSIK 310 Query: 295 KSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + + + +D M D R LY A ++ + NP G R + I G CE+GD + Sbjct: 311 EIPNVRNYASVDGGMTDNPRYALYQARYDAYVVENPLGQRTKV-YTIAGRCCESGDILIK 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ + G L I TGAY S YN +++ Q +I R T+ +L+ Sbjct: 370 DIKLPELKTGQHLAILATGAYNYSMSSNYNRFPRPAVVLLKNGQARVIVKRETYGDLVRN 429 Query: 414 D 414 D Sbjct: 430 D 430 >gi|228957795|ref|ZP_04119536.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801877|gb|EEM48753.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 438 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 122/421 (28%), Positives = 180/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCQAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIG 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 +A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 192 FALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTLCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N A D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 372 HLPKVAASDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|86149204|ref|ZP_01067436.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597409|ref|ZP_01100644.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 84-25] gi|218561973|ref|YP_002343752.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|13124081|sp|Q9PII5|DCDA_CAMJE RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|85840562|gb|EAQ57819.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190470|gb|EAQ94444.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 84-25] gi|112359679|emb|CAL34465.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925586|gb|ADC27938.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni IA3902] gi|315928385|gb|EFV07699.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930531|gb|EFV09574.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 305] Length = 402 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 160/399 (40%), Positives = 233/399 (58%), Gaps = 3/399 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + ++L TPFY Y+ I++ +L AF + + YA+KANSN ++++ LA+L Sbjct: 1 MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLD 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE++RAL A A +I+FSGVGKT +E+ AL+ I N+ESE+E+ L Sbjct: 61 SGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLES 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L KA I+ RVNP+++A TH ISTG E+KFG+ I +Y YA ++ G Sbjct: 121 VAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQ+ I H+A ++ L ++L++ +++ D+GGGLG+AY + P D Sbjct: 181 VHFHIGSQLLDISPIHEAAAIVAKLVRELKALQIDLKFFDIGGGLGVAYEKNECEPDLYD 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I +EPGR+LVA G V V+ K++ K FV++D AMND +RP+ Sbjct: 241 YAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYHEI N D+VG ICE+GDF A R + + D++ I+ TGAYG Sbjct: 301 LYEAYHEIILPYNQ---GEESLCDVVGGICESGDFFAKARSLPSTQSDDIMVIKNTGAYG 357 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + E+ + Q +IR R F++ I L+ Sbjct: 358 FSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQIALE 396 >gi|153939469|ref|YP_001392682.1| diaminopimelate decarboxilase [Clostridium botulinum F str. Langeland] gi|170755777|ref|YP_001782960.1| diaminopimelate decarboxilase [Clostridium botulinum B1 str. Okra] gi|152935365|gb|ABS40863.1| diaminopimelate decarboxilase [Clostridium botulinum F str. Langeland] gi|169120989|gb|ACA44825.1| diaminopimelate decarboxilase [Clostridium botulinum B1 str. Okra] gi|295320664|gb|ADG01042.1| diaminopimelate decarboxilase [Clostridium botulinum F str. 230613] Length = 428 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 119/424 (28%), Positives = 204/424 (48%), Gaps = 12/424 (2%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 + +L+ ++ LA +TP Y T I N + +F+ V YA KA Sbjct: 6 SMNIKNNNLYIGEINTLDLAKKFKTPLYVMDETLIRDNCRRYVTSFNKEKNKVAYAGKAF 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 +A+ + G LD+VS GE+ A + P +++ F G KTI+EI++A+ G+ F Sbjct: 66 LTKAMCNLIKEEGLSLDVVSGGEIFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTF 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI--HS 180 ++ EL +N + K + R+ P I A+TH+ I TG+ + KFG + Sbjct: 126 VADNFQELDKINNICKNKNIKQRVILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIK 185 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGG 239 AS L ++ G HIGSQI + + + + +++ L ++ +I+ +D+GGG Sbjct: 186 AVKKASELENIQFVGFHCHIGSQIFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGG 245 Query: 240 LGIAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y P ++ + + G + +++EPGR +V + G+ + V S Sbjct: 246 FGIYYKEGDEPKKIEEFCKIILDKTKSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGS 305 Query: 293 IKKSADK-TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK+ + ++ ++ M D +RP LY + +E N A D L +VG CE+GD + Sbjct: 306 IKEIPNIAKYIAVNGGMTDNIRPALYKSEYECVVC-NKALDNLLEEVKVVGKCCESGDIL 364 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 N K+ + DLL I TGAYG + YN LL + VN + ++ R +++ LI Sbjct: 365 IDNVKLPIVETDDLLAILNTGAYGYSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLI 424 Query: 412 ELDS 415 + + Sbjct: 425 QNEV 428 >gi|188588479|ref|YP_001922416.1| diaminopimelate decarboxylase [Clostridium botulinum E3 str. Alaska E43] gi|188498760|gb|ACD51896.1| diaminopimelate decarboxylase [Clostridium botulinum E3 str. Alaska E43] Length = 431 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 130/427 (30%), Positives = 211/427 (49%), Gaps = 14/427 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT--MVCYALK 60 + K + L + L TP Y I +N + F ++ V YA K Sbjct: 6 SMKIEDNELTIGGIKSTDLVKEYGTPLYVMDEGLIRQNCNDYYRYFKCNNSLNRVAYAGK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A + K + LD+VS GEL A + P ++++F G KT+DEI+L ++ G+ Sbjct: 66 AFLTLEMCKIINEENLSLDVVSGGELFTAYKSGFPLDKVMFHGNNKTLDEIELGVKLGVG 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQI 178 F V++ E+ LN+ A S K I R+ P I A+TH+ I TG+ + KFG + I Sbjct: 126 RFVVDNYYEMDALNRIAASYNKVQKIFLRITPGIEAHTHEYIKTGQVDSKFGFAPVENMI 185 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVG 237 + LP +++SG+ HIGSQI +IE + A +++ L ++ + G+ I+ +D+G Sbjct: 186 EDAINKSIDLPNIELSGLHCHIGSQIFEIEPYEDAVEIMLGLIKKIQENTGYLIKELDLG 245 Query: 238 GGLGIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG GI Y+ +P ++ +Y + G + +I+EPGR +V + GI + + Sbjct: 246 GGFGIYYNRGDKPKTTKEYCEAILNKVDEVCSRTGQSKPSLIIEPGRSIVGNSGITLYTI 305 Query: 291 ISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 SIK +D M+D +RP LY A +E + N L I G CE+GD Sbjct: 306 GSIKDIPGVRKYVSVDGGMSDNIRPALYHAEYEC-MLANKVEKDLKETVTICGKCCESGD 364 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + N I+ P+ D+L + TGAYG S YN P +MV ++ +I R T+++ Sbjct: 365 ILLNNVNISAPQSNDILSVMTTGAYGYSMSNNYNKIPKPPVVMVKDNKERLICRRETYED 424 Query: 410 LIELDSI 416 LI+ + + Sbjct: 425 LIQNEVV 431 >gi|295424953|ref|ZP_06817665.1| diaminopimelate decarboxylase [Lactobacillus amylolyticus DSM 11664] gi|295065392|gb|EFG56288.1| diaminopimelate decarboxylase [Lactobacillus amylolyticus DSM 11664] Length = 437 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 118/421 (28%), Positives = 184/421 (43%), Gaps = 14/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 EG L V LA TP Y I + F F+ V YA KA + Sbjct: 13 EGHLLIGGVDSVSLAKKYGTPLIVYDVGQIRQQIRKFKQVFEEEKTSYAVSYASKAFATI 72 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + A G+ D+VS GEL AL A P ER+ F G K+ E+++A+++ + ++ Sbjct: 73 AMYQVAAEEGAYTDVVSAGELYTALKASFPMERVSFHGNNKSRAELEMAVKNHVGKIIID 132 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + E+K L + + R+ P I+A+TH+ TG+ + KFG ++ + A Sbjct: 133 NFYEIKLLKEVLQENDSHIKVMLRLTPGISAHTHEYDQTGQIDSKFGFDLNSGQAAKALQ 192 Query: 186 STL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGI 242 L P + + G+ HIGSQI ++ F A + L + R + + I+VGGG GI Sbjct: 193 EVLAEPRMDMVGIHAHIGSQIFELNGFEMAAQKLMQVASSWREKYGYTAKIINVGGGFGI 252 Query: 243 AYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y S P + +I +EPGR +V G + +V S K Sbjct: 253 KYVSSDHPLKPEAFVKAIVETIKQEAAKNDYPLPEIDIEPGRSIVGPAGYNLYQVGSRKD 312 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E N R H I G CE+GD ++ + Sbjct: 313 VPGLKPYVTVDGGMGDNIRPALYQAEYETVL-ANNLKAREEEHVRIAGKYCESGDLLSAD 371 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + +PGD+L + TGAYG + YN + ++ R + ++L+ LD Sbjct: 372 AFLPKTKPGDILAMLDTGAYGYSMASNYNRNPRPAVVFAENGHAQVVVKRESLEDLVRLD 431 Query: 415 S 415 Sbjct: 432 Q 432 >gi|329114281|ref|ZP_08243043.1| Diaminopimelate decarboxylase [Acetobacter pomorum DM001] gi|326696357|gb|EGE48036.1| Diaminopimelate decarboxylase [Acetobacter pomorum DM001] Length = 447 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 164/417 (39%), Positives = 240/417 (57%), Gaps = 4/417 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVI 68 L E V+L +A V TP + + A G+D + YA+KAN + A++ Sbjct: 32 LMLEGVALNAIADSVGTPCWVLGAGTLRTRMRRMHAAMRDAGLDVSIHYAVKANDHLAIL 91 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + G G DIVS GEL RA+ A +PA RIVFSGVGKT E++ A+ GI NVES Sbjct: 92 TLIGQEGFGADIVSGGELARAIKAGIPASRIVFSGVGKTDAELEQAISHGIGQINVESAE 151 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 EL+ ++ A LGK+A I R+NPD++A TH KI+TG +KFGIP +LYA+A TL Sbjct: 152 ELEAISAIATKLGKQATITLRINPDVDAKTHAKITTGLAANKFGIPFQDAAALYAHAFTL 211 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 GV+ G HIGSQI + A+ + +L + +R+ G+ + +D GGGLGI Y ++ Sbjct: 212 SGVRPVGFATHIGSQILTTTPYRAAYARVAELVRSVRAAGNAVSVVDCGGGLGICYRNET 271 Query: 249 RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA-DKTFVILDVA 307 A I G+L K+ +EPGR+ + G+L++ VI K+ D F++LD A Sbjct: 272 EG-QPEALAGAIKAELGDLGVKLAIEPGRWPIGPAGVLLSSVILRKEQGMDVPFLVLDTA 330 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 MN+ +RP++YDA+H I + A + A +VGP+CE+GD A +R + + Sbjct: 331 MNELLRPSMYDAWHGILPLAPQAFSQPVSLAHVVGPVCESGDTFARDRLLPPLARNARIA 390 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQKTP 424 + TGAYGAV S TYNSR L E++V Q+ +IR R + +EL + +++P+ L K Sbjct: 391 LLDTGAYGAVMSSTYNSRPLAAEVLVEDGQWQVIRQRQSVEELWQDETVPSHLAKAT 447 >gi|258510731|ref|YP_003184165.1| diaminopimelate decarboxylase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477457|gb|ACV57776.1| diaminopimelate decarboxylase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 443 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 123/426 (28%), Positives = 189/426 (44%), Gaps = 14/426 (3%) Query: 3 AFKY-FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYAL 59 F +G L VS L TP Y I F F +G+ + YA Sbjct: 16 HFPRDEKGHLLIGGVSAVDLVAQFGTPLIAYDEGLIRDTIRAFHRVFQDEGVPYQISYAS 75 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA A+ + G G+D+VS GEL ALAA VPA ++ G KT +E++ A++SGI Sbjct: 76 KAFCTMAICQLAHEEGLGIDVVSGGELYTALAAGVPASKLHMHGNNKTPEELEYAIESGI 135 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQ 177 V++ E+ L G+ + RV P + A+TH ISTG+++ KFG + HQ Sbjct: 136 GAVIVDNFDEIDLLADILQETGRTVDVLVRVAPGVEAHTHDYISTGQQDSKFGFDLASHQ 195 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDV 236 + ++ + ++ GV HIGSQI +E F + + + R G +++ Sbjct: 196 VEEAFSRLKEVERARVIGVHAHIGSQIFDVEGFRLLADRMAGVYEDGLRRFGLPFSVLNL 255 Query: 237 GGGLGIAYHSDHRPPSSSDY------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GGG GI Y + PP + A G + +EPGR +V G+ + +V Sbjct: 256 GGGFGIPYTDEDAPPVADLVRGVIRAAKAAFAARGMDVPVLWIEPGRSIVGPAGVTLYRV 315 Query: 291 ISIKKSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 S K + +V +D M D R LY A + N A D + G CE+GD Sbjct: 316 GSRKVIPGVRNYVAIDGGMTDNPRLALYGAKYH-ACYANRAADPPDRPWSVAGKCCESGD 374 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + + P+PGDLL + TGAY + YN + + ++ R T+ + Sbjct: 375 MLIWDLPLPDPQPGDLLAVFATGAYTYAMASHYNRIPKPAVVFCRDGEARLVARRETWAD 434 Query: 410 LIELDS 415 + LD Sbjct: 435 VARLDV 440 >gi|294791044|ref|ZP_06756202.1| diaminopimelate decarboxylase [Scardovia inopinata F0304] gi|294458941|gb|EFG27294.1| diaminopimelate decarboxylase [Scardovia inopinata F0304] Length = 444 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 113/425 (26%), Positives = 176/425 (41%), Gaps = 19/425 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQA 66 G LA TP Y + I +NY F AF+ + YA KA S +A Sbjct: 11 GHFMVGGCDCLDLAATYGTPVIAYDVSRIRRNYRAFRQAFEKAKIRSVISYASKAFSCKA 70 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + G +D+VS GEL ALAA P ERI F G K+ +E+ AL+S + +++ Sbjct: 71 VYNLIDQEGGHVDVVSGGELATALAAGFPPERISFHGNNKSQEELTFALKSKVGLIIIDN 130 Query: 127 ESELKTLNQR-------AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 E++ L + A I R+ P ++A+TH ISTG+ + KFG + Sbjct: 131 FHEIELLQNMLPSPRSAHRDQVEPAHIMLRITPGVSAHTHDYISTGQTDSKFGFDLASGQ 190 Query: 180 SLYAYASTLPGVKISG--VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDV 236 + A L + + HIGSQI +F +++ +L + R + + Q +++ Sbjct: 191 ADRALQKVLADSRFCMEGIHAHIGSQIFDPYAFQALARIMINLAARWRRDFGYCAQSVNL 250 Query: 237 GGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 GGG GIAY+ + P D+ + +EPGR LV + Sbjct: 251 GGGFGIAYNQEDDPDDVEDFVQSLSSSIRQAAADLSFPLPTVWIEPGRSLVGSAACTLYT 310 Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 V S K I ++ R I G CE+GD Sbjct: 311 VGSRKDIPGYNSYIFVDGGMGDNIRPALYRARYQAFLAKNPVGRPAETVRIAGKYCESGD 370 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + +PGD+L I TGAYG + YN + V ++ R ++++ Sbjct: 371 VLCWDQALPQTQPGDILAIPATGAYGYSMASNYNRNPRPAVVFVEDGHPQLVIRRESYED 430 Query: 410 LIELD 414 LI LD Sbjct: 431 LIRLD 435 >gi|229172157|ref|ZP_04299722.1| Diaminopimelate decarboxylase [Bacillus cereus MM3] gi|228611500|gb|EEK68757.1| Diaminopimelate decarboxylase [Bacillus cereus MM3] Length = 449 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 178/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--A 183 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ Sbjct: 143 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQVIE 202 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR +Q+R + ++ ++VGGG GI Sbjct: 203 IALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEQVRERTNYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 263 RYTESDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTIYTVGSVKD 322 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDI 382 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + G I+ R T++ +I D Sbjct: 383 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGNDR 442 Query: 416 I 416 I Sbjct: 443 I 443 >gi|317008940|gb|ADU79520.1| diaminopimelate decarboxylase [Helicobacter pylori India7] Length = 405 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 159/396 (40%), Positives = 235/396 (59%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL+T+ + A Sbjct: 65 DCVSIGEIHRALKAGIKPYRIVFSGVGKSESEIEQALKLNILFLNVESFMELQTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FV++D MNDF+RP+LY Sbjct: 244 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKDVHLPELEPGDKLAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 398 >gi|182701657|ref|ZP_02613665.2| diaminopimelate decarboxilase [Clostridium botulinum NCTC 2916] gi|226950770|ref|YP_002805861.1| diaminopimelate decarboxilase [Clostridium botulinum A2 str. Kyoto] gi|182670179|gb|EDT82155.1| diaminopimelate decarboxilase [Clostridium botulinum NCTC 2916] gi|226843877|gb|ACO86543.1| diaminopimelate decarboxilase [Clostridium botulinum A2 str. Kyoto] Length = 422 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 120/423 (28%), Positives = 203/423 (47%), Gaps = 12/423 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 +L+ ++ LA +TP Y T I N + +FD V YA KA Sbjct: 1 MNIKNNNLYIGEINTLDLAKKFKTPLYVMDETLIRDNCRRYITSFDKEKNKVAYAGKAFL 60 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 +A+ + G LD+VS GE+ A + P +++ F G KTI+EI++A+ G+ F Sbjct: 61 TKAMCNLIKEEGLSLDVVSGGEIFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTFV 120 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI--HSL 181 ++ EL +N + K + R+ P I A+TH+ I TG+ + KFG + Sbjct: 121 ADNFQELDKINNICKNKNIKQRVILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKA 180 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL 240 AS L ++ G HIGSQI + + + + +++ L ++ +I+ +D+GGG Sbjct: 181 VKKASELENIQFVGFHCHIGSQIFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGGF 240 Query: 241 GIAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 GI Y P ++ + + G + +++EPGR +V + G+ + V SI Sbjct: 241 GIYYKEGDEPKKIEEFCKIILDKTKSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSI 300 Query: 294 KKSADK-TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K+ + ++ ++ M D +RP LY + +E N A D L +VG CE+GD + Sbjct: 301 KEIPNIAKYIAVNGGMTDNIRPALYKSEYECVVC-NKALDNLLEEVKVVGKCCESGDILI 359 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N K+ + DLL I TGAYG + YN LL + VN + ++ R +++ LI+ Sbjct: 360 DNVKLPIVETDDLLAILNTGAYGYSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQ 419 Query: 413 LDS 415 + Sbjct: 420 NEV 422 >gi|170017508|ref|YP_001728427.1| diaminopimelate decarboxylase [Leuconostoc citreum KM20] gi|169804365|gb|ACA82983.1| Diaminopimelate decarboxylase [Leuconostoc citreum KM20] Length = 433 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 128/427 (29%), Positives = 193/427 (45%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYA 58 M+ + L ++V LA TP Y Y T I + F F+ + +V YA Sbjct: 1 MNYPTNEQNHLTIDHVDAVDLASTYGTPLYVYDVTKIRQTMRAFKAIFEKENVPYIVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + +A+ + G D+VS GEL A+ A + + F+G K+ DE+ +A+Q G Sbjct: 61 SKAFATKAIYQVAQQEGIHADVVSGGELYTAIQAGFNPKHLSFNGNNKSWDELMMAVQQG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I V++ EL+ L++ A I R++P I+A+TH+ ISTG+++ KFG + Sbjct: 121 IGTVIVDNFLELQLLSEIAEKCQVVQDILLRISPGISAHTHEFISTGQQDSKFGFDLLTG 180 Query: 179 HSL--YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + Y AS + G+ HIGSQI + F K LL D Q I+V Sbjct: 181 QAKAAYDIASQDSHFHLRGLHAHIGSQIFDVTGFEKNAALLADTAQSWGWQ---PDIINV 237 Query: 237 GGGLGIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 GGG GI Y D P SDY + +I +EPGR +V G + Sbjct: 238 GGGFGIRYTDDDEPLPESDYVSAIIRTLKGKAAEYDWKMPEIWIEPGRSVVGPAGQTLYT 297 Query: 290 VISIKKSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V + K D I +D M D +RP LY+A +E N + G CE+G Sbjct: 298 VGARKDIPDMRHYIAVDGGMGDNIRPALYEANYEAVL-ANQPNIPAQEVVRVAGKYCESG 356 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + +K+ + GD+L + TGAYG + YN + V Q ++ R T++ Sbjct: 357 DVLVWQQKLPKTQAGDILSVLATGAYGYAMASNYNRNPRPAVVFVENGQHQLVVARETYE 416 Query: 409 ELIELDS 415 + LD Sbjct: 417 HIAALDR 423 >gi|317177106|dbj|BAJ54895.1| diaminopimelate decarboxylase [Helicobacter pylori F16] Length = 405 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 159/396 (40%), Positives = 231/396 (58%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LA L SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL T+ + A Sbjct: 65 DCVSIGEIHRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+ +V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 RILNALQGLDLTIICEPGRSIVAESGELIMQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + Q +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLE 398 >gi|229029197|ref|ZP_04185290.1| Diaminopimelate decarboxylase [Bacillus cereus AH1271] gi|228732105|gb|EEL82994.1| Diaminopimelate decarboxylase [Bacillus cereus AH1271] Length = 449 Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats. Identities = 122/421 (28%), Positives = 176/421 (41%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ A GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 143 NFLELEILHDLAGQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L +++R + ++ ++VGGG GI Sbjct: 203 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEEVRERANYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y +I +EPGR +V D G + V S+K Sbjct: 263 RYTESDTPLTLETYVRAVTSAVREQFTACNYPLPEIWVEPGRSIVGDAGTTIYTVGSVKD 322 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDI 382 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + G I+ R T++ +I D Sbjct: 383 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGNDR 442 Query: 416 I 416 I Sbjct: 443 I 443 >gi|317180096|dbj|BAJ57882.1| diaminopimelate decarboxylase [Helicobacter pylori F32] Length = 405 Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats. Identities = 160/396 (40%), Positives = 233/396 (58%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LA L SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL+T+ + A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 RILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + Q +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLE 398 >gi|42780616|ref|NP_977863.1| diaminopimelate decarboxylase [Bacillus cereus ATCC 10987] gi|42736536|gb|AAS40471.1| diaminopimelate decarboxylase [Bacillus cereus ATCC 10987] Length = 438 Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats. Identities = 123/421 (29%), Positives = 178/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++L +++R + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + G I+ R T++ +I D Sbjct: 372 NLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|75760421|ref|ZP_00740464.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218896450|ref|YP_002444861.1| diaminopimelate decarboxylase [Bacillus cereus G9842] gi|228900100|ref|ZP_04064333.1| Diaminopimelate decarboxylase [Bacillus thuringiensis IBL 4222] gi|228964487|ref|ZP_04125599.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar sotto str. T04001] gi|74492100|gb|EAO55273.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218544631|gb|ACK97025.1| diaminopimelate decarboxylase [Bacillus cereus G9842] gi|228795189|gb|EEM42683.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar sotto str. T04001] gi|228859506|gb|EEN03933.1| Diaminopimelate decarboxylase [Bacillus thuringiensis IBL 4222] Length = 438 Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats. Identities = 130/422 (30%), Positives = 191/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFFELEILHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIG 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 +A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 192 FALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKD 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYSARYE-AMLANRGNDENEELVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 371 IHLPKVASADLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGND 430 Query: 415 SI 416 I Sbjct: 431 RI 432 >gi|261837735|gb|ACX97501.1| diaminopimelate decarboxylase [Helicobacter pylori 51] Length = 404 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 160/396 (40%), Positives = 233/396 (58%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LA L SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL+T+ + A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 RILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + Q +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLE 398 >gi|332673135|gb|AEE69952.1| diaminopimelate decarboxylase [Helicobacter pylori 83] Length = 405 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 160/396 (40%), Positives = 233/396 (58%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LA L SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL+T+ + A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELQTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 RILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + Q +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLE 398 >gi|228951897|ref|ZP_04113995.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807820|gb|EEM54341.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 438 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 130/422 (30%), Positives = 190/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIT 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 +A + G+ HIGSQI + F +A ++LR ++R + ++ ++VGGG GI Sbjct: 192 FALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLVEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKD 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYSARYE-AMLANRGNDENEELVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 371 IHLPKVASSDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGND 430 Query: 415 SI 416 I Sbjct: 431 RI 432 >gi|229195717|ref|ZP_04322479.1| Diaminopimelate decarboxylase [Bacillus cereus m1293] gi|228587723|gb|EEK45779.1| Diaminopimelate decarboxylase [Bacillus cereus m1293] Length = 449 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 125/421 (29%), Positives = 177/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTLLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 143 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR + +R + ++ ++VGGG GI Sbjct: 203 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEAVRERTNYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y +I +EPGR +V D G + V S+K Sbjct: 263 RYTESDTPLTLETYVRAVTSAVREQFTLCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 322 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDI 382 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + V G I+ R T++ +I D Sbjct: 383 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGNDR 442 Query: 416 I 416 I Sbjct: 443 I 443 >gi|317181634|dbj|BAJ59418.1| diaminopimelate decarboxylase [Helicobacter pylori F57] Length = 405 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 158/396 (39%), Positives = 231/396 (58%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LA L SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL+T+ + A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELQTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKFYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+ +V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 RILNALQGLDLTIICEPGRSIVAESGELIMQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + GD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEAGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + Q +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLE 398 >gi|229155087|ref|ZP_04283200.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 4342] gi|228628372|gb|EEK85086.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 4342] Length = 449 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL + PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQSGFPASRIHFHGNNKTDEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 143 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR +++R H + + ++VGGG GI Sbjct: 203 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVRERTHYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 263 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 322 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDI 382 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + G I+ R T++ +I D Sbjct: 383 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGNDR 442 Query: 416 I 416 I Sbjct: 443 I 443 >gi|170761245|ref|YP_001788652.1| diaminopimelate decarboxilase [Clostridium botulinum A3 str. Loch Maree] gi|169408234|gb|ACA56645.1| diaminopimelate decarboxilase [Clostridium botulinum A3 str. Loch Maree] Length = 422 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 118/423 (27%), Positives = 202/423 (47%), Gaps = 12/423 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 +L+ ++ LA +TP Y T I N + +F+ V YA KA Sbjct: 1 MNIKNNNLYIGEINTLDLAKKFKTPLYVMDETLIRDNCKRYVTSFNKGKNKVAYAGKAFL 60 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 +A+ + G LD+VS GE+ A + P +++ F G KTI+EI++A+ G+ F Sbjct: 61 TKAMCNLIKEEGLSLDVVSGGEIFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTFV 120 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI--HSL 181 ++ EL +N + K + R+ P I A+TH+ I TG+ + KFG + Sbjct: 121 ADNFQELDKINNICKNKNIKQRVILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKA 180 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL 240 A L ++ G HIGSQI + + + + +++ L ++ +I+ +D+GGG Sbjct: 181 VKKAYKLENIQFVGFHCHIGSQIFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGGF 240 Query: 241 GIAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 GI Y P ++ + + G + +++EPGR +V + G+ + V SI Sbjct: 241 GIYYKEGDEPKKIEEFCKIILDKTRSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSI 300 Query: 294 KKSADK-TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K+ + ++ ++ M D +RP LY + +E N A D L +VG CE+GD + Sbjct: 301 KEIPNIAKYIAVNGGMTDNIRPALYKSEYECVVC-NKALDNLLEEVKVVGKCCESGDILI 359 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N K+ + DLL I TGAYG + YN LL + VN + ++ R +++ LI+ Sbjct: 360 DNVKLPIVETDDLLAILNTGAYGYSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQ 419 Query: 413 LDS 415 + Sbjct: 420 NEV 422 >gi|308182464|ref|YP_003926591.1| diaminopimelate decarboxylase [Helicobacter pylori PeCan4] gi|308064649|gb|ADO06541.1| diaminopimelate decarboxylase [Helicobacter pylori PeCan4] Length = 405 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 159/396 (40%), Positives = 233/396 (58%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTYKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL T+ A Sbjct: 65 DCVSIGEIHRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIETIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FV++D MNDF+RP+LY Sbjct: 244 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGREISPCDVVGPVCESSDTFLKDANLPELEPGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 398 >gi|269128137|ref|YP_003301507.1| diaminopimelate decarboxylase [Thermomonospora curvata DSM 43183] gi|268313095|gb|ACY99469.1| diaminopimelate decarboxylase [Thermomonospora curvata DSM 43183] Length = 461 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 117/420 (27%), Positives = 191/420 (45%), Gaps = 15/420 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L V + LA TP Y Y + + ++ AF D V YA KA A Sbjct: 42 EDGVLTIGGVDVRDLAARFGTPLYVYDEEDVRQRAREYATAFQ--DGSVHYAGKAFLCTA 99 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ L G GLD+ + GEL ALAA P E+I G K++ E++ AL++G+ ++S Sbjct: 100 LLRWLDEEGLGLDVCTGGELAVALAAGFPPEKITMHGSNKSLAELERALEAGVGRVVIDS 159 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYAY 184 E+ L A G + + RV + A+TH+ I+T + KFG Sbjct: 160 FEEIARLGYLAQEKGARPKVMIRVTTGVEAHTHEFIATAHDDQKFGFSRTTGAALEAVRR 219 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKA-FKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 LP +++ G+ HIGSQI + F A +L L +G + +D+GGG GIA Sbjct: 220 VLQLPQLELVGLHSHIGSQIFDTDGFEVAAHRLAEQLVAIRDEHGLELPELDLGGGYGIA 279 Query: 244 YHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y P A + +G +I +EPGR +V G+ + +V ++K Sbjct: 280 YVPGDEPHDPKAIADSLKEIVARECRAYGLAMPRITVEPGRAIVGPGGVTLYEVGTVKDV 339 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +T+V +D M+D +R LY A + + + + +VG CE+GD + + Sbjct: 340 EGLRTYVSVDGGMSDNLRTALYGAEYTCVLASR-SSRAEPMLSRLVGKHCESGDIVVRDL 398 Query: 356 KIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD++ + TGAY + YN + V + ++ R T ++L+ LD Sbjct: 399 WLPRDVTAGDVVAVAATGAYCRSMASNYNFVPRPAVVAVRDGKARVLIRRETEEDLLRLD 458 >gi|56963566|ref|YP_175297.1| diaminopimelate decarboxylase [Bacillus clausii KSM-K16] gi|56909809|dbj|BAD64336.1| diaminopimelate decarboxylase [Bacillus clausii KSM-K16] Length = 443 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 122/419 (29%), Positives = 194/419 (46%), Gaps = 14/419 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L V LA TP + Y T I++ F AF+ G+ V YA KA S A Sbjct: 13 GHLEIGGVDTVDLAKKYDTPLFVYDTALIKERARAFKQAFEAEGVSYQVAYASKAFSCIA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + A L +D+VS GEL AL A V +I F G K+ E+++A+++GI C ++ Sbjct: 73 MYQLAASLDLSIDVVSGGELYTALKAGVEPGKIHFHGNNKSHGELEMAIKAGIGCIVADN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--Y 184 EL+ L + A ++ + + R+ P + A+TH+ I+TG+++ KFG I + A Sbjct: 133 FYELELLEELAANMEQTVSVLLRLTPGVEAHTHEFIATGQEDSKFGFDIASGQADKAAQI 192 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGGGLGIA 243 A + + GV HIGSQI + E F A + + + + ++ GGG GI Sbjct: 193 AERSKFIDLLGVHSHIGSQIFETEGFVLAIEKVFNQLQAWQEEFDFVPRVLNFGGGFGIR 252 Query: 244 YHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKS 296 Y +P Y I + +I +EPGR LV D + + S K Sbjct: 253 YVEGDKPLEPETYIREIVKETKKHADRLGLAIPEIWIEPGRSLVGDAATTLYTIGSTKDI 312 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D M+D +RP LYDA +E N A D+ + G CE+GD + + Sbjct: 313 PNVRRYLSVDGGMSDNLRPALYDAKYEGLL-ANRAHDKAEETFSVAGKCCESGDMLVWDM 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + + GD+L + TGAYG + YN + ++ R ++++L +LD Sbjct: 372 PLPEVQHGDVLAMFCTGAYGYSMANNYNRIPRPAVVFAEDGADQLVIQRESYEDLTKLD 430 >gi|229078703|ref|ZP_04211257.1| Diaminopimelate decarboxylase [Bacillus cereus Rock4-2] gi|228704576|gb|EEL57008.1| Diaminopimelate decarboxylase [Bacillus cereus Rock4-2] Length = 438 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 129/422 (30%), Positives = 189/422 (44%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--A 183 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIR 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 +A + G+ HIGSQI + F +A ++LR ++R + ++ ++VGGG GI Sbjct: 192 FALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLVEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKD 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYSARYE-AMLANRGNDENEELVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 371 IHLPKVASSDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGND 430 Query: 415 SI 416 I Sbjct: 431 RI 432 >gi|228920229|ref|ZP_04083577.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228938632|ref|ZP_04101237.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971513|ref|ZP_04132137.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978124|ref|ZP_04138502.1| Diaminopimelate decarboxylase [Bacillus thuringiensis Bt407] gi|228781596|gb|EEM29796.1| Diaminopimelate decarboxylase [Bacillus thuringiensis Bt407] gi|228788172|gb|EEM36127.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821008|gb|EEM67028.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228839428|gb|EEM84721.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|326939140|gb|AEA15036.1| diaminopimelate decarboxylase [Bacillus thuringiensis serovar chinensis CT-43] Length = 438 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 130/422 (30%), Positives = 191/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIG 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 +A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 192 FALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKD 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYSARYE-AMLANRGNDENEELVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 371 IHLPKVASADLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGND 430 Query: 415 SI 416 I Sbjct: 431 RI 432 >gi|315057735|gb|ADT72064.1| Diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni S3] Length = 402 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 161/399 (40%), Positives = 234/399 (58%), Gaps = 3/399 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + ++L TPFY Y+ I++ +L AF + + YA+KANSN ++++ LA+L Sbjct: 1 MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLD 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE++RAL A A +I+FSGVGKT +E+ AL+ I N+ESE+E+ L Sbjct: 61 SGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLES 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L KA I+ RVNP+++A TH ISTG E+KFG+ I +Y YA ++ G Sbjct: 121 VAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQ+ I H+A ++ L ++L++ +++ D+GGGLG+AY D P + Sbjct: 181 VHFHIGSQLLDISPIHEAAAIVAKLARELKALQIDLKFFDIGGGLGVAYEKDECEPDLYN 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I +EPGR+LVA G V V+ K++ K FV++D AMND +RP+ Sbjct: 241 YAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYHEI A + D+VG ICE+GDF A R + + GD++ I+ TGAYG Sbjct: 301 LYEAYHEIILPYTQAQES---LCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYG 357 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + E+ + Q +IR R F+ I L+ Sbjct: 358 FSMSSNYNTRNKVCELALEEGQVRLIRQRENFENQIALE 396 >gi|67922226|ref|ZP_00515740.1| Diaminopimelate decarboxylase [Crocosphaera watsonii WH 8501] gi|67855929|gb|EAM51174.1| Diaminopimelate decarboxylase [Crocosphaera watsonii WH 8501] Length = 474 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 106/430 (24%), Positives = 178/430 (41%), Gaps = 18/430 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSNQ 65 L L+ L +P Y T + + + F ++ V YA KA S+ Sbjct: 43 DHLEIGGCDLQTLVEQFASPLYILDETTLRTACHQYRDGFKTYYQGESQVIYASKAWSSL 102 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVP--------AERIVFSGVGKTIDEIDLALQS 117 AV+ +A G D+VS GEL A A++I F G K++ E++ AL+ Sbjct: 103 AVVGVIATENLGFDVVSGGELYTTQKALTQLGYSCQEIAQKIYFHGNNKSVAELEQALEM 162 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G + +K PI R+ P I +TH+ I TG + KFG +Q Sbjct: 163 GCTIIVDNWLELQTLVQLGETIPNQKTPILIRLTPGIECHTHEYIRTGHLDSKFGFDPNQ 222 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + ++++Y + + G+ HIGSQI + + +L + + + G + +++G Sbjct: 223 LETVFSYIAEQKSLDCRGLHAHIGSQIFERQPHQDLAGVLVEWLKIGQEYGLTLSELNIG 282 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKV 290 GGLGI Y D PPS ++ + + +I EPGR L+ + V Sbjct: 283 GGLGIRYTEDDDPPSIEEWIKAASEAVMKACQRSGIPLPKLIAEPGRSLIGSACVTAYTV 342 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 S K+ D + + + N ++ + G CE+GD Sbjct: 343 GSSKEIPDIRTYVAVDGGMSDNPRPITYQSSYSVVLGNKMSAEINETVTVAGKHCESGDI 402 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + ++ PGD+L I TGAY + YN ++VN + ++I R T+ +L Sbjct: 403 VIKDAQLPQTHPGDILVIMGTGAYNYSMASNYNRLPRPAAVLVNNGEANLILKRETYDDL 462 Query: 411 IELDSIPAWL 420 I D +P L Sbjct: 463 IRQDCLPEKL 472 >gi|324325535|gb|ADY20795.1| diaminopimelate decarboxylase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 438 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 178/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR + +R + ++ ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEAVRERTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTLCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + G I+ R T++ +I D Sbjct: 372 NLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|300087798|ref|YP_003758320.1| diaminopimelate decarboxylase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527531|gb|ADJ25999.1| diaminopimelate decarboxylase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 437 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 131/422 (31%), Positives = 204/422 (48%), Gaps = 13/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG---MDTMVCYALKANSN 64 EG L + V +E LA TP Y +S ++ F D V +A KA N Sbjct: 17 EGQLLIDGVGVESLASEFGTPLYIFSEQDFRDRCREYNRVFKADFSSDLKVLFAGKAWLN 76 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +++K +A G GLD+VSEGEL A AA P +RI G K+ E++LA++ GI V Sbjct: 77 LSILKIIAEEGIGLDVVSEGELGIASAAGFPLDRIYMHGNNKSDRELELAVEKGIGRIVV 136 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +++S++ L A + I R+NP I+ +TH KISTG + KFG+ + + + + Sbjct: 137 DNQSDISRLEAIASEKKDRPAILVRINPGIDPHTHAKISTGNIDSKFGMGLEEARDVIDH 196 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-DLTQQLRSNGHNIQHIDVGGGLGIA 243 + + G HIGSQI +I+ F A ++ + + + +D+GGG I Sbjct: 197 IIKSDVLDLKGFHYHIGSQIFEIQPFLDALTTALAFISDLMTDLDYATRELDIGGGYAIP 256 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVISIKKS 296 Y S+ PP +YA I +F + + +EPGR L+A + + V IK+ Sbjct: 257 YLSEQNPPGIGEYAKAISDHFDSECQRLKLQKPCVTIEPGRSLIASSTVALYTVGVIKRI 316 Query: 297 ADKTFVIL-DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + D M D +RPTLY A +E + N D + G CE+GD +A + Sbjct: 317 SGIRDYVCVDGGMADNIRPTLYGAQYE-PSLANRMNDSNVGKYTVAGRYCESGDILATDV 375 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + P+ GDLL + GAY + YN+ + V+ + +IR R T ++LI D Sbjct: 376 SLPEPKTGDLLVMPGAGAYCLPMASNYNASFRPAVVKVHQGKATLIRRRETMEDLIRYDI 435 Query: 416 IP 417 P Sbjct: 436 RP 437 >gi|326692740|ref|ZP_08229745.1| diaminopimelate decarboxylase [Leuconostoc argentinum KCTC 3773] Length = 434 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 120/426 (28%), Positives = 187/426 (43%), Gaps = 14/426 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYA 58 M + L + V LA TP Y Y + I + F F+ + +V YA Sbjct: 1 MDYSTNAQAHLTIDGVDAVALADTYGTPLYVYDVSKIRQTMRAFKAIFEREDVPYVVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA S +A+ + G DIVS GEL ALAA P + F+G K+ DE+ +A+++G Sbjct: 61 SKAFSTKAIYQVAQQEGIHADIVSGGELYTALAAGFPPAHLSFNGNNKSWDELTMAVRAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL+ L++ A + + I R++P I+A+TH+ ISTG+++ KFG + Sbjct: 121 VGTIIVDNFLELQWLSEIAATQQVQQAILLRISPGISAHTHEFISTGQQDSKFGFDLLTG 180 Query: 179 HSLYAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + AY A + + G+ HIGSQI + F K LL + I+V Sbjct: 181 QAKRAYEIARLDANLNLRGLHAHIGSQIFDVTGFEKNAALLAETAHSWGWT---PAVINV 237 Query: 237 GGGLGIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 GGG GI Y D P SDYA + F +I +EPGR +V G + Sbjct: 238 GGGFGIRYTDDDTPLPESDYAAAIIATLKAKAEAFAWPMPEIWIEPGRSIVGPAGQTLYT 297 Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + S K D + + + N + G CE+GD Sbjct: 298 IGSRKDIPDLRQYLAVDGGMGDNIRPALYQANYDAVLANDPNAPTTEVVRVAGKYCESGD 357 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + + +PGD+L ++ TGAYG + YN + V +I R T+ + Sbjct: 358 VLVWEQALPQTKPGDILSVQATGAYGYAMASNYNRNPRPAVVFVENGAHQVIVARETYAD 417 Query: 410 LIELDS 415 ++ LD Sbjct: 418 IVALDR 423 >gi|302536936|ref|ZP_07289278.1| diaminopimelate decarboxylase [Streptomyces sp. C] gi|302445831|gb|EFL17647.1| diaminopimelate decarboxylase [Streptomyces sp. C] Length = 463 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 123/419 (29%), Positives = 187/419 (44%), Gaps = 12/419 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + + + +LA TP Y +++AF G D V YA KA ++A Sbjct: 44 EDGVVTVGGIEVTRLAEEFGTPAYFLDEEDFRARCRAWAHAF-GKDADVFYAGKAFLSKA 102 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V+K L G LD+ S GEL ALAA +PAERI F G K+ EI A+ +G+ ++S Sbjct: 103 VVKWLKEEGLNLDVCSGGELATALAAEMPAERIAFHGNNKSESEIRRAITAGVGRIVLDS 162 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYAY 184 E+ + A LG + P+ RV + A+TH+ I+T ++ KFGI + Sbjct: 163 FQEIARVAHIARELGVRQPVQIRVTVGVEAHTHEFIATAHEDQKFGIAVADGSAAEAVRR 222 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A +++ GV HIGSQI + F + K + L +R + ID+GGGLGIA Sbjct: 223 ALGHDSLELLGVHSHIGSQIFDMAGFEVSAKRVVRLLAAVRDEHGVELPEIDLGGGLGIA 282 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y S P + A + + +I +EPGR +V + +V +IK Sbjct: 283 YTSADDPREPHEIAKALTEIVARECESAGLKAPRISVEPGRAIVGPTAFTLYEVGTIKPL 342 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + T +V+ D + +VG CE+GD + + Sbjct: 343 EGLRTYVSVDGGMSDNIRTALYDAEYAVTLVSRVSDAEPMLVRVVGKHCESGDIVVKDAF 402 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + PGDLL + TGAY + YN L P + V +I R T ++L+ LD Sbjct: 403 LPADLAPGDLLAVPATGAYCRSMASNYNHALRPPVVAVRDGAARVIVRRETEEDLLSLD 461 >gi|207091832|ref|ZP_03239619.1| diaminopimelate decarboxylase [Helicobacter pylori HPKX_438_AG0C1] Length = 405 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 158/396 (39%), Positives = 234/396 (59%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL T+ + A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGVKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FV++D MNDF+RP+LY Sbjct: 244 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + + PGD + IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKDVHLPELEPGDKIAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 398 >gi|148654582|ref|YP_001274787.1| diaminopimelate decarboxylase [Roseiflexus sp. RS-1] gi|148566692|gb|ABQ88837.1| diaminopimelate decarboxylase [Roseiflexus sp. RS-1] Length = 445 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 122/419 (29%), Positives = 194/419 (46%), Gaps = 12/419 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 G L + L TP Y + I AF T V YA KA N Sbjct: 27 GGRLFIGGCDVAALTQQYGTPLYLFDEMTIRAACRACRTAFADHYRGTTAVHYAGKALLN 86 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + +A G GLD+VS GEL AL A P +RI G KT E++ AL +GI V Sbjct: 87 IAIAQIIADEGLGLDVVSGGELYVALRAGFPTQRIHMHGNAKTHAELEQALAAGIGQIIV 146 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL L + P+A R+ P+I A+TH I TG KFG+P+ + + Sbjct: 147 DNLDELDMLRRLTAHRSSPQPVALRIAPNIAADTHAHIQTGHATSKFGLPLDALDAAAEK 206 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGGGLGIA 243 GV+++G+ H+GSQ+ + A ++L D +LR I+ I+ GGG+G+ Sbjct: 207 LCAASGVRLTGLHAHLGSQLFDRAPYAAAVEVLLDSAARLRDRFGVLIEEINAGGGIGVP 266 Query: 244 YHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y +D P +A + G ++++EPGR ++A G+ + +++ K Sbjct: 267 YTTDQPLPDIDAWAALLGDSLVRGCERRGLPLMRLVIEPGRSIIARAGVALYTIVATKPL 326 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 F+ +D M D +RP LYDA + D + I G CE+GD + + Sbjct: 327 PHMRFLHIDGGMGDNIRPALYDARYTAALAERMR-DPVEECVAIAGRYCESGDVLIRDLM 385 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + R G++L + GAY + TYN +++N + +I+ R T+++LI + Sbjct: 386 LPRARVGEILAVPVAGAYTLSMASTYNLAPRPAVVLINEGEARLIQRRETYEDLIAREV 444 >gi|323489651|ref|ZP_08094878.1| diaminopimelate decarboxylase [Planococcus donghaensis MPA1U2] gi|323396782|gb|EGA89601.1| diaminopimelate decarboxylase [Planococcus donghaensis MPA1U2] Length = 440 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 115/422 (27%), Positives = 177/422 (41%), Gaps = 13/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 +G L +L TP Y Y F F+ G+ V YA KA S Sbjct: 12 QGHLTIGGTDSVELVENYGTPLYVYDIQLFRDRAKAFQETFEKAGIGYQVAYASKAFSTI 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + A LD+VS GEL A+ A P E+I F G K+++E+ +A + GI C V+ Sbjct: 72 AIYQVAAEEKLSLDVVSAGELYTAVKAGFPVEKIHFHGNNKSMEELQMAFEVGIGCIVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + E++ L + + L + I RV P I A+TH I+TG+++ KFG + + A+ Sbjct: 132 NFYEIELLKKLSEKLKQPMNILLRVTPGIEAHTHDYITTGQEDSKFGFDLKNGQADRAFE 191 Query: 186 STLPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 T + G+ HIGSQI +F A + L + + +++GGG GI Sbjct: 192 QTFDHNYLNLLGLHCHIGSQIFDTGAFQLASEKLMQKMASWKEQFNYTCPVLNLGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y + P + Y + G +I +EPGR L+ D G + + S K+ Sbjct: 252 RYTEEDTPLEPAVYVEQMIETVKQTANASGYPIPEIWIEPGRSLIGDAGTTLYTIGSTKE 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + I N A +L I G CE+GD + Sbjct: 312 VPGTRKYAAVDGGMSDNIRPALYGAKYSSVIANNANAQLTEQYTIAGKCCESGDKLIEQA 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ GD+L I TGAYG + YN + V ++ R T +LI+ D Sbjct: 372 ELPAVAAGDILGIFCTGAYGYSMASNYNRIARPAVVFVENGVSQLVVKRETNDDLIKQD- 430 Query: 416 IP 417 +P Sbjct: 431 LP 432 >gi|47566309|ref|ZP_00237337.1| diaminopimelate decarboxylase [Bacillus cereus G9241] gi|47556862|gb|EAL15193.1| diaminopimelate decarboxylase [Bacillus cereus G9241] Length = 438 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL + PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQSGFPASRIHFHGNNKTDEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 191 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR +++R H + + ++VGGG GI Sbjct: 192 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVRERTHYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDI 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + G I+ R T++ +I D Sbjct: 372 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGNDR 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|87124750|ref|ZP_01080598.1| Diaminopimelate decarboxylase [Synechococcus sp. RS9917] gi|86167629|gb|EAQ68888.1| Diaminopimelate decarboxylase [Synechococcus sp. RS9917] Length = 453 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 112/421 (26%), Positives = 182/421 (43%), Gaps = 11/421 (2%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQA 66 L L LA TP Y +I + A ++ YA KANS+ A Sbjct: 30 RLMVGGCRLSALAERYGTPLYVLDEASIRAACRAYREALQRHYPGPSLAVYASKANSSLA 89 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + +A G GLD VS GEL AL +P ERIV G K+ +E+ LA +SG+ ++ Sbjct: 90 MTALVASEGLGLDAVSAGELLTALEGGMPPERIVLHGNNKSDEELLLAYRSGVT-VVADN 148 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 +++ L Q G + R P I +TH+ I TG + KFG Q+ S+ Sbjct: 149 HHDIERLAQLVPDGGAPVRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLESVLRSLK 208 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 ++SG+ HIGSQI +++ ++ D + R GH ++ +++GGGLGI Y Sbjct: 209 GAAWAEVSGLHAHIGSQIFELDPHRDLAAVMADALRLARGLGHPVEDLNLGGGLGIRYVE 268 Query: 247 DHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADK 299 PPS + ++ +++ EPGR LVA G+ + ++ S K+ Sbjct: 269 SDDPPSIDTWVQVVASAVAKACEERQLSLPRLLCEPGRSLVAAAGVTLYRLGSRKEVPGL 328 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + + + + + G CE+GD + + + Sbjct: 329 RTYLSVDGGMSDNPRPITYQSLYTACLADRPQAAATETVTLAGKHCESGDVLLKDVALPA 388 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GD+L + TGAY A S YN ++V+ + +I+ R ++L+ D IP+ Sbjct: 389 SASGDVLVVLATGAYNASMSSNYNRIPRPAAVLVHDGEADLIQRRERPEDLLRYDEIPSR 448 Query: 420 L 420 L Sbjct: 449 L 449 >gi|217033418|ref|ZP_03438848.1| hypothetical protein HP9810_1g32 [Helicobacter pylori 98-10] gi|216944123|gb|EEC23551.1| hypothetical protein HP9810_1g32 [Helicobacter pylori 98-10] Length = 405 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 161/396 (40%), Positives = 234/396 (59%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL+T+ + A Sbjct: 65 DCVSIGEIHRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELQTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKIYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 RILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + Q +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLE 398 >gi|188527096|ref|YP_001909783.1| diaminopimelate decarboxylase [Helicobacter pylori Shi470] gi|188143336|gb|ACD47753.1| diaminopimelate decarboxylase [Helicobacter pylori Shi470] gi|308063152|gb|ADO05039.1| diaminopimelate decarboxylase [Helicobacter pylori Sat464] Length = 405 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 161/396 (40%), Positives = 234/396 (59%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL+T+ + A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 RILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVNLPELEPGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + Q +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLE 398 >gi|254778993|ref|YP_003057098.1| Diaminopimelate decarboxylas (DAP decarboxylase) [Helicobacter pylori B38] gi|254000904|emb|CAX28840.1| Diaminopimelate decarboxylas (DAP decarboxylase) [Helicobacter pylori B38] Length = 405 Score = 262 bits (668), Expect = 9e-68, Method: Composition-based stats. Identities = 160/397 (40%), Positives = 233/397 (58%), Gaps = 2/397 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTYKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK++ EI+ AL+ I NVES ELKT+ A Sbjct: 65 DCVSIGEIHRALKAGIKPYRIVFSGVGKSVFEIEQALKLNILFLNVESFMELKTIETIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SL KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLEIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKDAHFPELEPGDKLAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLEI 399 >gi|308184093|ref|YP_003928226.1| diaminopimelate decarboxylase [Helicobacter pylori SJM180] gi|308060013|gb|ADO01909.1| diaminopimelate decarboxylase [Helicobacter pylori SJM180] Length = 405 Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 159/396 (40%), Positives = 235/396 (59%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL+T+ + A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELQTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + + PGD + IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKVSPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 398 >gi|328880398|emb|CCA53637.1| Diaminopimelate decarboxylase [Streptomyces venezuelae ATCC 10712] Length = 489 Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 118/418 (28%), Positives = 199/418 (47%), Gaps = 15/418 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L V L ++A TP Y + + T+ NAF D + YA KA +A++ Sbjct: 74 GRLLVGGVPLAEIAEGHGTPAYVLDEAEVRERCRTYRNAFP--DAEIHYAAKAFLCRALV 131 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + G GLD+ S GEL A+ PAERI+ G K+ ++ AL+ G+ +++ + Sbjct: 132 HWVEEEGLGLDVCSAGELELAVTTGFPAERILLHGNAKSPQDLGTALRLGVGRIVIDTPA 191 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E+ + S G + + RV P I+A H+KI TG + KFG+ + H+ +A A L Sbjct: 192 EIARIAAAVGSGGHQ-KVMVRVTPGISAGGHRKIRTGSDDQKFGLSLRDGHAQHAIARVL 250 Query: 189 --PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYH 245 P ++++G+ H+GSQI ++ + A + L L ++R + +D+GGG GIA+ Sbjct: 251 DQPQLELTGIHCHLGSQITDVKPYLVAVRRLVGLMARVRDTHGVTLPELDLGGGHGIAHR 310 Query: 246 SDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSAD 298 + A + ++++EPGR + G+ V +V+++K++ Sbjct: 311 PGEPALDLTTLARKVRAELAESCAAAGLPVPRLVIEPGRAVTGPAGVAVYRVLAVKRTPG 370 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 +TFV +D M+D RP LY + I + +VG CE GD +A + + Sbjct: 371 RTFVAVDGGMSDNPRPALYGVRYAPRLIGRHSLAGP-ERVTVVGRHCEAGDILAEDVPLP 429 Query: 359 -LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDLL + GAY + +YN P + V + ++ R T ++L D Sbjct: 430 ADTHPGDLLAVPVAGAYHLSMASSYNLVGRPPVVAVRDGRARLLVRRETLEDLRARDV 487 >gi|268611237|ref|ZP_06144964.1| diaminopimelate decarboxylase [Ruminococcus flavefaciens FD-1] Length = 432 Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 125/423 (29%), Positives = 186/423 (43%), Gaps = 15/423 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANS 63 +G L +LA TP Y + N F ++ G V YA KA S Sbjct: 11 EKGHLTVSGTDTVELAAEYGTPLYVMDEEMVRSNCSRFRDSMKKFYGEKGEVHYAGKAFS 70 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 + + +A G GLD VS GEL AL A P E+I F G KT E++ A+ +G+ Sbjct: 71 CMEMCRIVASEGIGLDAVSIGELYTALKAGFPMEKIGFHGNNKTDAELEFAVDNGVGHII 130 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 V++ SEL L A + GKK + FR+ P I+A+TH + TG+ + KFG + + A Sbjct: 131 VDNISELHRLEAIAAAKGKKPAVMFRIKPGIDAHTHDFVKTGQIDSKFGFALETGEAFDA 190 Query: 184 YASTLPGVKIS--GVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGL 240 L ++ G+ HIGSQI I F +A K++ +++ G+ + +++GGG Sbjct: 191 VKEALSCENLTLAGLHCHIGSQIFDIAPFEEAAKVMLGFIAKIKAELGYEVPGLNLGGGF 250 Query: 241 GIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 GI Y P + + G Q + +EPGR + A G+ + V + Sbjct: 251 GIKYMEKDDPQPFEVFLERVSAVVKGECEKLGLTQPFMYIEPGRSIAAPAGLTLYTVGAR 310 Query: 294 KKSADKTFVIL-DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K+ + I D M D R LY + +E N A + I G CE+GD I Sbjct: 311 KEIPNIRTYISVDGGMADSPRYILYKSEYEAIV-ANKANEERTEKVTIAGKCCESGDLIG 369 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N + GD++ + TGAY S YN + VN I R T ++I Sbjct: 370 ENMSLQHAESGDIIAVCATGAYNYSMSSNYNRLQKPAVVFVNKGTSRIAVKRETLDDIIR 429 Query: 413 LDS 415 D Sbjct: 430 NDV 432 >gi|307327899|ref|ZP_07607081.1| diaminopimelate decarboxylase [Streptomyces violaceusniger Tu 4113] gi|306886417|gb|EFN17421.1| diaminopimelate decarboxylase [Streptomyces violaceusniger Tu 4113] Length = 463 Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 119/419 (28%), Positives = 189/419 (45%), Gaps = 12/419 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + ++ LA TP Y ++ AF G D V YA KA ++AV Sbjct: 45 DGVATVGGIDVKTLAEEFGTPGYFLDEDDFRARCRSWREAF-GEDADVFYAGKAFLSRAV 103 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ L G LD+ S GEL ALAA +PAERI G K+ EI+ A+++G+ ++S Sbjct: 104 VRWLTEEGLNLDVCSAGELVTALAAGMPAERIALHGNNKSTGEIERAVEAGVGRIVLDSF 163 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYA 185 E+ + A LGK+ + R+ + A+TH+ I+T ++ KFGIP+ A Sbjct: 164 QEIARVAHIAQRLGKRQRVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGLAAEAVRRA 223 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L G+++ G+ HIGSQI F A + L ++R + ID+GGGLGIAY Sbjct: 224 LKLDGLELIGIHSHIGSQIFDTSGFEVAAHRVVGLLGEIRDEHGVELPEIDLGGGLGIAY 283 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 S P + A + ++ +EPGR +V + +V ++K+ Sbjct: 284 TSGDDPREPHEIAKALRDIVHRECDAAGLAVPRLSVEPGRAIVGPTAFTLYEVGTVKELP 343 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T +V+ + + + +VG CE+GD + + + Sbjct: 344 GLRTYVSVDGGMSDNIRTALYDAEYSVALVSRSSTAEPMLSRVVGKHCESGDIVVRDAFL 403 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDL+ + TGAY + YN L P + V Q I R T ++L+ LD Sbjct: 404 PADLAPGDLIAVPATGAYCRSMASNYNHALRPPVVAVRDGQAREIVRRETEEDLLRLDV 462 >gi|329767990|ref|ZP_08259501.1| diaminopimelate decarboxylase [Gemella haemolysans M341] gi|328838475|gb|EGF88083.1| diaminopimelate decarboxylase [Gemella haemolysans M341] Length = 430 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 114/427 (26%), Positives = 191/427 (44%), Gaps = 14/427 (3%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYAL 59 G L+ V + +L TP Y Y + TF N F +T V +A Sbjct: 5 DGMTVENGELNISGVGVSELKAQYGTPLYIYDENMLVNQCRTFINNFKSSKFNTEVLFAS 64 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA S V++ + G G+D+VS GE+ A A ++ F G KT +E+ AL+ G+ Sbjct: 65 KAFSCLEVLRIASREGLGVDVVSLGEIHTAYKAGYNMKKAYFHGNNKTREELQYALEVGV 124 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++++ E + +N+ G + + R+N I+A+TH+ I T K + KFG ++ Sbjct: 125 GTIVIDNDYEYEMINEIVRESGNRVDVLLRINTGIDAHTHEYIKTAKDDSKFGYSVYDET 184 Query: 180 SLYAYASTLPGVKISG--VDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDV 236 A ++ HIGSQI + SF +A K++ + T++ G I +++ Sbjct: 185 IYELIADINNQSNLNFVGFHSHIGSQIFEKTSFFEAVKVVMEFTKKVQERLGLTISVLNL 244 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTK 289 GGG G+ Y + RP +++ + ++EPGR L + G + Sbjct: 245 GGGFGVYYTEEDRPFELAEFLREYIEVVERESDNFGLDLTKVVIEPGRSLTCNAGSTLYS 304 Query: 290 VISIKKS-ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V +K + A + +V +D M D R LY A +E + N + + G CE+G Sbjct: 305 VGGVKNTFAGREYVFVDGGMADNPRYALYKAKYE-AMLANKMNEEADTTYTVAGKCCESG 363 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + ++ K+ GDLL + TGAY S YN +P + V ++ T + Sbjct: 364 DMLVMDAKLPKAEQGDLLLVSSTGAYNYSMSSNYNRLPKLPVVFVKDGTSRLVVKGETLE 423 Query: 409 ELIELDS 415 +LI D Sbjct: 424 DLIRQDI 430 >gi|229177926|ref|ZP_04305298.1| Diaminopimelate decarboxylase [Bacillus cereus 172560W] gi|228605414|gb|EEK62863.1| Diaminopimelate decarboxylase [Bacillus cereus 172560W] Length = 438 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 130/422 (30%), Positives = 190/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIG 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 +A + G+ HIGSQI + F +A ++LR ++R + ++ ++VGGG GI Sbjct: 192 FALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLVEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYSARYE-AMLANRGNDENEELVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 371 IHLPKVVASDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGND 430 Query: 415 SI 416 I Sbjct: 431 RI 432 >gi|228996629|ref|ZP_04156268.1| Diaminopimelate decarboxylase [Bacillus mycoides Rock3-17] gi|229004278|ref|ZP_04162079.1| Diaminopimelate decarboxylase [Bacillus mycoides Rock1-4] gi|228757139|gb|EEM06383.1| Diaminopimelate decarboxylase [Bacillus mycoides Rock1-4] gi|228763261|gb|EEM12169.1| Diaminopimelate decarboxylase [Bacillus mycoides Rock3-17] Length = 449 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 129/423 (30%), Positives = 189/423 (44%), Gaps = 14/423 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 +G L +LA TP Y Y +I + F AF G V YA KA Sbjct: 22 EQGHLEIGGCDTTQLAKQYGTPLYVYDEASIREKCRAFHRAFQESGFSYQVAYASKAFLC 81 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ + CF V Sbjct: 82 MEMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQADVGCFVV 141 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI--PIHQIHSLY 182 ++ E++ L+ A GK I RV P + A+TH+ I+TG+ + KFG Q Sbjct: 142 DNFFEMEILHDLAQQYGKIVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSAGQAMQAI 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLG 241 A + G+ HIGSQI + F +A ++L + +++R G+ + ++VGGG G Sbjct: 202 RIALEKSNYNVLGIHSHIGSQIFETAGFVRAVEVLHNFLEEIREQTGYVVTVLNVGGGFG 261 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y P + Y + +I +EPGR +V D G + V ++K Sbjct: 262 IRYTEADTPLTLETYVHAVTDAVREQFTRNNYPLPEIWIEPGRSIVGDAGTTIYTVGAVK 321 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 +D M D +RP LY A +E + N + I G CE+GD + Sbjct: 322 DIPGIRKYVSVDGGMTDNLRPALYGARYE-AMLANRGKEEAEEVVSIAGKCCESGDMLIW 380 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + ++ DLL I TGAYG + YN + G I+ R T++ +I Sbjct: 381 DIELPQVATADLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGASQIVVERETYENIIGN 440 Query: 414 DSI 416 D I Sbjct: 441 DRI 443 >gi|88808911|ref|ZP_01124420.1| Diaminopimelate decarboxylase [Synechococcus sp. WH 7805] gi|88786853|gb|EAR18011.1| Diaminopimelate decarboxylase [Synechococcus sp. WH 7805] Length = 453 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 110/424 (25%), Positives = 187/424 (44%), Gaps = 11/424 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 +G L L +LA TP Y +I + + A + ++ YA KANS+ Sbjct: 28 QGKLSIGGCVLSELAERYGTPLYVLDEASIRQACRAYREALERHYPGPSLAIYASKANSS 87 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ +A G GLD VS GEL AL +PA+R+V G K+ +E+ LA ++G+ Sbjct: 88 MALTAVVASEGLGLDAVSAGELITALDGGMPADRMVLHGNNKSSEELALAYRNGVM-VVA 146 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +++ +L L G+ + R P I +TH+ I TG + KFG Q+ + Sbjct: 147 DNQHDLDLLQTIVPDQGEPVRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEPVLRS 206 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 ++ G+ HIGSQI ++E ++ D R+ GH ++ ++VGGGLGI Y Sbjct: 207 LQGASWARVEGLHAHIGSQIFELEPHRDLAAVMADALLLARTLGHPVEDLNVGGGLGIRY 266 Query: 245 HSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + PPS + ++ + +++ EPGR LVA G+ + V + K Sbjct: 267 TASDDPPSIDAWVQVVGSAVASACRERNLELPRLLCEPGRSLVATAGVTLYTVGARKVVP 326 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + + + + R I G CE+GD + + Sbjct: 327 GIRTYLSVDGGMSDNPRPITYQSQYTACLADRPQARAEEMVTIAGKHCESGDVLLKDLAF 386 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 GD+L + TGAY + S YN ++++ S+ +++ R ++L+ D +P Sbjct: 387 PSCSSGDILVVLATGAYNSSMSSNYNRIPRPAAVLISASEAELVQRREQPEDLLRYDLLP 446 Query: 418 AWLQ 421 L+ Sbjct: 447 ERLR 450 >gi|317013735|gb|ADU81171.1| diaminopimelate decarboxylase [Helicobacter pylori Gambia94/24] Length = 405 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 157/397 (39%), Positives = 233/397 (58%), Gaps = 2/397 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LA+L SG Sbjct: 5 EELFQTYKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLANLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + +IVFSGVGK+ EI+ AL+ I NVES ELKT+ A Sbjct: 65 DCVSIGEIYRALKAGIKPYKIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLSAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ ++ +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLDPITEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FV++D MNDF+RP+LY Sbjct: 244 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKDANLPELEPGDKLAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLEI 399 >gi|228984597|ref|ZP_04144772.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775124|gb|EEM23515.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 449 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 123/421 (29%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 23 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 82 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL + PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 83 EMCRVAREENMSLDVVSGGELYTALQSGFPASRIHFHGNNKTDEEIVMALQANIGCFVVD 142 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + EL+ L+ AV GK I RV P + A+TH+ I+TG+ + KFG + ++ A Sbjct: 143 NFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIE 202 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 A + G+ HIGSQI + F +A ++LR +++R + ++ ++VGGG GI Sbjct: 203 LALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEEVRERTNYVVKVLNVGGGFGI 262 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 263 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKD 322 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + N D I G CE+GD + + Sbjct: 323 IPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDI 382 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + DLL I TGAYG + YN + G I+ R T++ +I D Sbjct: 383 TLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGNDR 442 Query: 416 I 416 I Sbjct: 443 I 443 >gi|315586283|gb|ADU40664.1| diaminopimelate decarboxylase [Helicobacter pylori 35A] Length = 405 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 161/396 (40%), Positives = 234/396 (59%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL+T+ + A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 RILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + Q +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLE 398 >gi|228990529|ref|ZP_04150494.1| Diaminopimelate decarboxylase [Bacillus pseudomycoides DSM 12442] gi|228769055|gb|EEM17653.1| Diaminopimelate decarboxylase [Bacillus pseudomycoides DSM 12442] Length = 449 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 130/423 (30%), Positives = 190/423 (44%), Gaps = 14/423 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 +G L +LA TP Y Y +I + F AF G V YA KA Sbjct: 22 EQGHLEIGGCDTTQLAKQYGTPLYVYDEASIREKCRAFHRAFQESGFSYQVAYASKAFLC 81 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ + CF V Sbjct: 82 MEMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQADVGCFVV 141 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI--PIHQIHSLY 182 ++ E++ L+ A GK I RV P + A+TH+ I+TG+ + KFG Q Sbjct: 142 DNFFEMEILHDLAQQYGKIVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSAGQAMQAI 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLG 241 A + G+ HIGSQI + F +A ++L + +++R G+ + ++VGGG G Sbjct: 202 RIALEKSNYNVLGIHSHIGSQIFETAGFVRAVEVLHNFLEEIREQTGYVVTVLNVGGGFG 261 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y RP + Y + +I +EPGR +V D G + V ++K Sbjct: 262 IRYTEADRPLTLETYVHAVTDAVREQFTRNNYPLPEIWIEPGRSIVGDAGTTIYTVGAVK 321 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 +D M D +RP LY A +E + N + I G CE+GD + Sbjct: 322 DIPGIRKYVSVDGGMTDNLRPALYGARYE-AMLANRGKEEAEEVVSIAGKCCESGDMLIW 380 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + ++ DLL I TGAYG + YN + G I+ R T++ +I Sbjct: 381 DIELPQVATADLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGASQIVVERETYENIIGN 440 Query: 414 DSI 416 D I Sbjct: 441 DRI 443 >gi|300812246|ref|ZP_07092684.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496760|gb|EFK31844.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|325686042|gb|EGD28100.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 436 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 106/418 (25%), Positives = 179/418 (42%), Gaps = 12/418 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L V +LA QTP + I + F F+ G+D V YA KA S A Sbjct: 14 GHLQIAGVDALELAARYQTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G D+VS GEL A+ A P +++ F G K+ E+++A+ G+ +++ Sbjct: 74 IYQVINEEGGHTDVVSGGELWTAMKAGFPMDKVSFHGNNKSRAELEMAVDQGVGVIILDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ L+Q + + RV P I+A+T++ I TG+ + KFG + + A Sbjct: 134 FHEIDLLSQILEEKDASSKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALEL 193 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L P +K++G+ HIGSQI + F A KL + + G+ ++VGGG GI Sbjct: 194 VLANPRMKMAGIHAHIGSQIFDVRGFVGCADKLCQLASAWKEKYGYETDILNVGGGFGIH 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKS 296 Y +P + ++ I + + + I +EPGR +V G + V S K Sbjct: 254 YTDQDQPLPAEEFVRAIVKEVKSKCQENNLKLPAIWIEPGRSIVGPAGFSLYTVGSRKDL 313 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + + + ++VG CE+GD + + Sbjct: 314 PGYPSYVALDGGMGDNIRPALYQAEYSAVVADRPQAEDEERVNLVGKYCESGDILIKSCP 373 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + PGD++ + TGAYG + YN + ++ R ++ +LI D Sbjct: 374 LPKTEPGDVVALLSTGAYGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAND 431 >gi|317179313|dbj|BAJ57101.1| diaminopimelate decarboxylase [Helicobacter pylori F30] Length = 405 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 162/396 (40%), Positives = 235/396 (59%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LA L SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLARLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + +IVFSGVGK+ EI+ AL+ I NVES EL+T+ + A Sbjct: 65 DCVSIGEIYRALKAGIKPYKIVFSGVGKSELEIEQALKLNILFLNVESFMELQTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSTFLEPISVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYH 303 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A H I I G ++ D+VGP+CE+ D + PGD L IEK GAYG+ Sbjct: 304 AKHAIRVITPCGGCKIS-PCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + Q +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLE 398 >gi|238060800|ref|ZP_04605509.1| diaminopimelate decarboxylase [Micromonospora sp. ATCC 39149] gi|237882611|gb|EEP71439.1| diaminopimelate decarboxylase [Micromonospora sp. ATCC 39149] Length = 462 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 111/419 (26%), Positives = 185/419 (44%), Gaps = 13/419 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G+L + + ++A TP Y + F AF D V YA KA +AV Sbjct: 45 DGALAVGGLGVREIAAEFGTPVYVLDEDDLRSRCRDFRAAFP--DADVYYAGKAFLCRAV 102 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ +A G LD+ + GEL AL+A +PAERI F G K++ E+ AL +G+ ++S Sbjct: 103 VRMIAEEGMFLDVCTGGELATALSAGMPAERIGFHGNNKSVAELTRALDAGVGRIVLDSF 162 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 +E+ L A G + + RV + A+TH+ I+T ++ KFG + + A Sbjct: 163 TEIDRLTALARERGVRPGVLIRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAAAAAFKV 222 Query: 188 LPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAY 244 + + G+ HIGSQI F + + + L Q+R G + +D+GGG GIAY Sbjct: 223 IDEGVLDLLGLHSHIGSQIFDASGFEVSARRVIALQAQIRDARGVELPELDLGGGFGIAY 282 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 + P + D A + + ++ +EPGR +V + +V ++K Sbjct: 283 TTQDDPAAPQDLAKRLRKIVDGECAAERLAVPRLSIEPGRAIVGPAVFTLYEVGTVKNVD 342 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T + + A + A +VG CE+GD + + + Sbjct: 343 GIRTYVSVDGGMSDNIRTALYDASYSATLASRASAAEPLLARVVGKHCESGDIVVKDEFL 402 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GDL+ + TGAY + YN + V Q +I R T ++L+ LD Sbjct: 403 PADVQAGDLVAVPGTGAYCRSMASNYNHVPRPAVVAVCDGQARLIVRRETEEDLLALDV 461 >gi|121612594|ref|YP_001000024.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|167004982|ref|ZP_02270740.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|87250310|gb|EAQ73268.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] Length = 402 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 162/399 (40%), Positives = 234/399 (58%), Gaps = 3/399 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + ++L TPFY Y+ I++ +L AF + + YA+KANSN ++++ LA+L Sbjct: 1 MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLD 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE++RAL A A +I+FSGVGKT +E+ AL+ I N+ESE+E+ L Sbjct: 61 SGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLES 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L KA I+ RVNP+++A TH ISTG E+KFG+ I +Y YA ++ G Sbjct: 121 VAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQ+ I H+A ++ L ++L++ +++ D+GGGLG+AY D D Sbjct: 181 VHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECESDLYD 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I +EPGR+LVA G V V+ K++ K FV++D AMND +RP+ Sbjct: 241 YAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYHEI N A + D+VG ICE+GDF A R + + GD++ I+ TGAYG Sbjct: 301 LYEAYHEIILPYNQAQES---LCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYG 357 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + E+ + Q +IR R F+ I L+ Sbjct: 358 FSMSSNYNTRNKVCELALEEGQVRLIRQRENFENQIALE 396 >gi|187776745|ref|ZP_02993218.1| hypothetical protein CLOSPO_00260 [Clostridium sporogenes ATCC 15579] gi|187775404|gb|EDU39206.1| hypothetical protein CLOSPO_00260 [Clostridium sporogenes ATCC 15579] Length = 428 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 120/424 (28%), Positives = 202/424 (47%), Gaps = 12/424 (2%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 + +L+ ++ LA TP Y T I N + +F+ V YA KA Sbjct: 6 SMNIKNNNLYIGKINTLGLATEFGTPLYVMDETLIRDNCRRYVTSFNKEKNKVAYAGKAF 65 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 +A+ + G LD+VS GE+ A + P E++ F G KTI+EI++A+ G+ F Sbjct: 66 LTKAMCNLIKEEGLYLDVVSGGEIFTAYKSGFPMEKVYFHGNNKTIEEIEMAINLGVGTF 125 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI--HS 180 ++ EL ++ + K + R+ P I A+TH+ I TG+ + KFG + Sbjct: 126 VADNFQELDIIDNACKNKNIKQRVILRIIPGIEAHTHEYIKTGQIDSKFGFTLIDNGAIK 185 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGG 239 A L ++ G HIGSQI + + + + +++ L ++ + +I+ +D+GGG Sbjct: 186 AVKKAYELENIQFVGFHCHIGSQIFETKPYEEEIEIMLKLIKRTNKELNIDIEELDLGGG 245 Query: 240 LGIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y +P ++ + G + +I+EPGR +V + G+ + V S Sbjct: 246 FGIYYKDGDKPKEIEEFCKIILDKVKNYSKEIGVREPVLIIEPGRSIVGNSGVTLYSVGS 305 Query: 293 IKKSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK+ + +V ++ M D +RP LY + +E N A D L IVG CE+GD + Sbjct: 306 IKEIPNVAKYVAVNGGMTDNIRPALYKSEYECVVC-NKALDNLLEEVKIVGKCCESGDVL 364 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 N K+ + DL I TGAYG + YN LL + VN + ++ R +++ LI Sbjct: 365 INNVKLPIVETNDLFAILNTGAYGYSMASNYNKALLPSVVFVNNDKVKLVCRRQSYENLI 424 Query: 412 ELDS 415 + + Sbjct: 425 QNEV 428 >gi|227364750|ref|ZP_03848799.1| diaminopimelate decarboxylase [Lactobacillus reuteri MM2-3] gi|325682623|ref|ZP_08162140.1| diaminopimelate decarboxylase [Lactobacillus reuteri MM4-1A] gi|227070209|gb|EEI08583.1| diaminopimelate decarboxylase [Lactobacillus reuteri MM2-3] gi|324978462|gb|EGC15412.1| diaminopimelate decarboxylase [Lactobacillus reuteri MM4-1A] Length = 441 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 119/419 (28%), Positives = 187/419 (44%), Gaps = 14/419 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQA 66 G L LAH TP Y I F F+ +D V YA KA S A Sbjct: 19 GHLTIGGCDAVDLAHRFGTPLVVYDVQQIRNQIRAFKQVFEENSVDYAVSYASKAFSAIA 78 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + +A G+ +D+VS GEL A+ A P + F G K+ +E+++A+ + +++ Sbjct: 79 MYQVVAAEGAHVDVVSGGELYTAIKAGFPMANVSFHGNNKSREELEMAIDHHVGTIMIDN 138 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E++ L + R+ P I+A+T+K I TG+ + KFG + + A Sbjct: 139 FHEIELLADVLEEHDAHVDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALTK 198 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L P +++ G+ HIGSQI ++ F A KL+ + I+VGGG GI Sbjct: 199 VLENPRMQMKGLHAHIGSQIFELAGFEGVAKKLVEVAAHWQEKFNYQAAVINVGGGFGIR 258 Query: 244 YHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P + ++ + I + I +EPGR + G + V S K Sbjct: 259 YVKDDTPLAPEEFVAAIIKAIKTEIKETNLAMPAIWIEPGRSIAGPAGYNLYTVGSRKDV 318 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D +RP LY+A +E NP + L H + G CE+GD ++ N+ Sbjct: 319 PGLKPYVTVDGGMGDNIRPALYEAQYETVLANNPRAE-LVEHVRVAGKYCESGDILSQNQ 377 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + +PGD+L + TGAYG + YN + ++ R T+ +LI LD Sbjct: 378 ALPATKPGDVLAMLDTGAYGYSMASNYNRNPRPAVVFAEKGTAQVVIKRETYDDLIHLD 436 >gi|148543846|ref|YP_001271216.1| diaminopimelate decarboxylase [Lactobacillus reuteri DSM 20016] gi|184153247|ref|YP_001841588.1| diaminopimelate decarboxylase [Lactobacillus reuteri JCM 1112] gi|148530880|gb|ABQ82879.1| diaminopimelate decarboxylase [Lactobacillus reuteri DSM 20016] gi|183224591|dbj|BAG25108.1| diaminopimelate decarboxylase [Lactobacillus reuteri JCM 1112] Length = 436 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 119/419 (28%), Positives = 187/419 (44%), Gaps = 14/419 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQA 66 G L LAH TP Y I F F+ +D V YA KA S A Sbjct: 14 GHLTIGGCDAVDLAHRFGTPLVVYDVQQIRNQIRAFKQVFEENSVDYAVSYASKAFSAIA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + +A G+ +D+VS GEL A+ A P + F G K+ +E+++A+ + +++ Sbjct: 74 MYQVVAAEGAHVDVVSGGELYTAIKAGFPMANVSFHGNNKSREELEMAIDHHVGTIMIDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E++ L + R+ P I+A+T+K I TG+ + KFG + + A Sbjct: 134 FHEIELLADVLEEHDAHVDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALTK 193 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L P +++ G+ HIGSQI ++ F A KL+ + I+VGGG GI Sbjct: 194 VLENPRMQMKGLHAHIGSQIFELAGFEGVAKKLVEVAAHWQEKFNYQAAVINVGGGFGIR 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P + ++ + I + I +EPGR + G + V S K Sbjct: 254 YVKDDTPLAPEEFVAAIIKAIKTEIKETNLAMPAIWIEPGRSIAGPAGYNLYTVGSRKDV 313 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D +RP LY+A +E NP + L H + G CE+GD ++ N+ Sbjct: 314 PGLKPYVTVDGGMGDNIRPALYEAQYETVLANNPRAE-LVEHVRVAGKYCESGDILSQNQ 372 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + +PGD+L + TGAYG + YN + ++ R T+ +LI LD Sbjct: 373 ALPATKPGDVLAMLDTGAYGYSMASNYNRNPRPAVVFAEKGTAQVVIKRETYDDLIHLD 431 >gi|199598988|ref|ZP_03212396.1| Diaminopimelate decarboxylase [Lactobacillus rhamnosus HN001] gi|199590096|gb|EDY98194.1| Diaminopimelate decarboxylase [Lactobacillus rhamnosus HN001] Length = 447 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 113/427 (26%), Positives = 177/427 (41%), Gaps = 12/427 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ EG L V+ +LAH QTP Y Y AI F F+ G+ V YA Sbjct: 1 MNFATNHEGQLTIGGVAASQLAHTFQTPLYVYDVGAIRHQIRAFKQVFETAGVAYAVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + A+ + +D+VS GEL A AA P +++ F G K+ E++ AL +G Sbjct: 61 SKAFATIAMYEVAKAEAIHVDVVSGGELYTAQAASFPMDKVSFHGNNKSKAELEQALDAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL L++ + K + RV P I+A+TH TG+ + KFG + Sbjct: 121 VGTIIVDNFYELDLLDELLKAAVGKQNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESG 180 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHID 235 + A L + + G+ HIGSQI ++ F + L + + ++ Sbjct: 181 QADEAAKRILADDHLNLLGIHAHIGSQIFEVAGFEAVTQKLLTVLDHWHQQFGFTPKVLN 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVT 288 VGGG GIAY P + F + +EPGR +V G + Sbjct: 241 VGGGFGIAYTKQDDPLPPEAFVQAIVTTLKTQSHGFNWPLPAVWIEPGRSIVGPAGYSLY 300 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V S K + + N + H +VG CE+G Sbjct: 301 TVGSRKDVPGLRPYVAVDGGMGDNIRPALYQAQYTAVVANHPTAQPTEHVHLVGKYCESG 360 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + +PGD++ + TGAYG + YN + V Q ++ R T+ Sbjct: 361 DILIDDAPLPATQPGDVVAVFDTGAYGYSMASNYNRNPRPAVVFVEDGQAQLVVTRETYA 420 Query: 409 ELIELDS 415 +LI+ D Sbjct: 421 DLIQHDQ 427 >gi|208434236|ref|YP_002265902.1| diaminopimelate decarboxylase [Helicobacter pylori G27] gi|208432165|gb|ACI27036.1| diaminopimelate decarboxylase [Helicobacter pylori G27] Length = 405 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 159/396 (40%), Positives = 233/396 (58%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL T+ A Sbjct: 65 DCVSIGEIHRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELTTIETIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FV++D MNDF+RP+LY Sbjct: 244 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 398 >gi|255036726|ref|YP_003087347.1| diaminopimelate decarboxylase [Dyadobacter fermentans DSM 18053] gi|254949482|gb|ACT94182.1| diaminopimelate decarboxylase [Dyadobacter fermentans DSM 18053] Length = 409 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 106/416 (25%), Positives = 177/416 (42%), Gaps = 15/416 (3%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + Y + + +L +P Y Y I + AF G++ + +A KA Sbjct: 5 DHYPY-----SIQGIDPIQLTKQYGSPLYVYDGATIRRKAAELQYAFAGVNMKIKFACKA 59 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N+N A+++ + +G LD+VS GEL A A +I F+ G +E+ A+++G Sbjct: 60 NTNLAILRLMREIGVELDVVSPGELEMGKIAGYDASQITFTPSGVDFEEVREAVETGAIV 119 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 L L + G P R+ P++ A H KI T + KFGI + + + Sbjct: 120 NVDS----LPLLEWFGQTYGNSKPCMIRIKPNVAAGGHTKIMTAHADSKFGISVLLLDEI 175 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 K+ G+ H GS I E F K +L + + Sbjct: 176 LEMIKKYDI-KVIGLHQHTGSDIKDAEPFLKVADILLETAKHFPDLQIIDLGGGFKVSYL 234 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQC--KIILEPGRFLVADVGILVTKVISIKKSADK 299 + + ++ EPG+FLV++ G L +K+ + Sbjct: 235 PGDAITDMDLLGKKISKRFRTFCEEYGRDLQLWFEPGKFLVSESGFLFVTTNVVKEDPAR 294 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV +D +N +RP +Y +YH I I NP G+ H ++VG ICET D A +R++ Sbjct: 295 NFVHVDSGLNHLIRPMMYGSYHHILNISNPKGEPKH--YNVVGYICET-DTFATDRELPE 351 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 R GD+L GAYG S YN+R E++++ + ++R R T ++L+ + Sbjct: 352 VRQGDVLAFLNAGAYGLTMSSNYNARFRPAEVLIDNGEAKLVRRRETMEDLLRTQT 407 >gi|148926410|ref|ZP_01810093.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni CG8486] gi|145844573|gb|EDK21679.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni CG8486] Length = 402 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 161/399 (40%), Positives = 232/399 (58%), Gaps = 3/399 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + ++L TPFY Y+ I++ +L AF + + YA+KANSN ++++ LA+L Sbjct: 1 MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLD 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE++RAL A A +I+FSGVGKT +E+ AL+ I N+ESE+E+ L Sbjct: 61 SGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLES 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L KA I+ RVNP+++A TH ISTG E+KFGI I +Y YA ++ G Sbjct: 121 VAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGIEIDIARKMYLYAKNSSFLEPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQ+ I H+A ++ L ++L++ +++ D+GGGLG+AY D D Sbjct: 181 VHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECESDLYD 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I +EPGR+LVA G V V+ K++ K FV++D AMND +RP+ Sbjct: 241 YAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYHEI N D+VG ICE+GDF A R + + D++ I+ TGAYG Sbjct: 301 LYEAYHEIILPYNQ---GEESLCDVVGGICESGDFFAKARSLPSTQSDDIMVIKNTGAYG 357 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + E+ + Q +IR R F++ I L+ Sbjct: 358 FSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQIALE 396 >gi|205356036|ref|ZP_03222804.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni CG8421] gi|205346160|gb|EDZ32795.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni CG8421] Length = 402 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 160/399 (40%), Positives = 232/399 (58%), Gaps = 3/399 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + ++L TPFY Y+ I++ +L AF + + YA+KANSN ++++ LA+L Sbjct: 1 MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLD 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE++RAL A A +I+FSGVGKT +E+ AL+ I N+ESE+E+ L Sbjct: 61 SGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLES 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L KA I+ RVNP+++A TH ISTG E+KFG+ I +Y YA ++ G Sbjct: 121 VAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQ+ I H+A ++ L ++L++ +++ D+GGGLG+AY D D Sbjct: 181 VHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECESDLYD 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I +EPGR+LVA G V V+ K++ K FV++D AMND +RP+ Sbjct: 241 YAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYHEI N D+VG ICE+GDF A R + + D++ I+ TGAYG Sbjct: 301 LYEAYHEIILPYNQ---GEESLCDVVGGICESGDFFAKARSLPSTQSDDIMVIKNTGAYG 357 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + E+ + Q +IR R F++ I L+ Sbjct: 358 FSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQIALE 396 >gi|158523325|gb|ABW70801.1| diaminopimelate decarboxylase [Helicobacter pylori] Length = 405 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 160/396 (40%), Positives = 235/396 (59%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE++RAL A + RIVFSGVGK+ EI+ AL+ I NVES ELKT+ A Sbjct: 65 DCVSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + + PGD + IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 398 >gi|210134488|ref|YP_002300927.1| diaminopimelate decarboxylase [Helicobacter pylori P12] gi|210132456|gb|ACJ07447.1| diaminopimelate decarboxylase [Helicobacter pylori P12] Length = 405 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 159/396 (40%), Positives = 233/396 (58%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTYKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES ELKT+ A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A + V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLDPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FV++D MNDF+RP+LY Sbjct: 244 GILNSLQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + + PGD + IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKVSPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 398 >gi|317012132|gb|ADU82740.1| diaminopimelate decarboxylase [Helicobacter pylori Lithuania75] Length = 405 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 159/396 (40%), Positives = 234/396 (59%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L++ AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLSYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL T+ A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIETIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + + PGD + IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 398 >gi|217031512|ref|ZP_03437017.1| hypothetical protein HPB128_21g70 [Helicobacter pylori B128] gi|298736763|ref|YP_003729293.1| diaminopimelate decarboxylase [Helicobacter pylori B8] gi|216946712|gb|EEC25308.1| hypothetical protein HPB128_21g70 [Helicobacter pylori B128] gi|298355957|emb|CBI66829.1| diaminopimelate decarboxylase [Helicobacter pylori B8] Length = 405 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 158/396 (39%), Positives = 235/396 (59%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL T+ + A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FV++D MNDF+RP+LY Sbjct: 244 GILNSLQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + ++ PGD + IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKDARLPELEPGDKIAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 398 >gi|297379512|gb|ADI34399.1| diaminopimelate decarboxylase [Helicobacter pylori v225d] Length = 405 Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 161/396 (40%), Positives = 234/396 (59%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKKAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL+T+ + A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + Q +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDRQIRVIRKREALEDLWRLE 398 >gi|116514245|ref|YP_813151.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093560|gb|ABJ58713.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 436 Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 107/418 (25%), Positives = 179/418 (42%), Gaps = 12/418 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L V +LA QTP + I + F F+ G+D V YA KA S A Sbjct: 14 GHLQIAGVDALELAAKYQTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G D+VS GEL A+ A P +++ F G K+ E++LA+ G+ +++ Sbjct: 74 IYQVINEEGGHTDVVSGGELWTAMKAGFPMDKVSFHGNNKSRAELELAVDQGVGVIILDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ L+Q + + RV P I+A+T++ I TG+ + KFG + + A Sbjct: 134 FHEIDLLSQILEEKDASSKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALEL 193 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L P +K++G+ HIGSQI + F A KL + + G+ ++VGGG GI Sbjct: 194 VLSNPRMKMAGIHAHIGSQIFDVRGFVGCADKLCQLASAWKEKYGYETDILNVGGGFGIH 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKS 296 Y +P + ++ I + + + I +EPGR +V G + V S K Sbjct: 254 YTDQDQPLPAEEFVRAIVKEVKSKCQENNLKLPAIWIEPGRSIVGPAGFSLYTVGSRKDL 313 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + + + ++VG CE+GD + + Sbjct: 314 PGYPSYVALDGGMGDNIRPALYQAEYSAVVADRPQAEDEERVNLVGKYCESGDILIKSCP 373 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + PGD++ + TGAYG + YN + ++ R ++ +LI D Sbjct: 374 LPKTEPGDVVALLSTGAYGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAND 431 >gi|313123902|ref|YP_004034161.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280465|gb|ADQ61184.1| Diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 436 Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 106/418 (25%), Positives = 179/418 (42%), Gaps = 12/418 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L V +LA QTP + I + F F+ G+D V YA KA S A Sbjct: 14 GHLQIAGVDALELAARYQTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G D+VS GEL A+ A P +++ F G K+ E+++A+ G+ +++ Sbjct: 74 IYQVINEEGGHTDVVSSGELWTAMKAGFPMDKVSFHGNNKSRAELEMAVDQGVGVIILDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ L+Q + + RV P I+A+T++ I TG+ + KFG + + A Sbjct: 134 FHEIDLLSQILEEKDASSKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALEL 193 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L P +K++G+ HIGSQI + F A KL + + G+ ++VGGG GI Sbjct: 194 VLANPRMKMAGIHAHIGSQIFDVRGFVGCADKLCQLASAWKEKYGYETDILNVGGGFGIH 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKS 296 Y +P + ++ I + + + I +EPGR +V G + V S K Sbjct: 254 YTDQDQPLPAEEFVRAIVKEVKSKCQENNLKLPAIWIEPGRSIVGPAGFSLYTVGSRKDL 313 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + + + ++VG CE+GD + + Sbjct: 314 PGYPSYVALDGGMGDNIRPALYQAEYSAVVADRPQAEDEERVNLVGKYCESGDILIKSCP 373 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + PGD++ + TGAYG + YN + ++ R ++ +LI D Sbjct: 374 LPKTEPGDVVALLSTGAYGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAND 431 >gi|313507304|pdb|3C5Q|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase (I148l Mutant) From Helicobacter Pylori Complexed With L-Lysine Length = 425 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 159/396 (40%), Positives = 235/396 (59%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 25 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 84 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE++RAL A + RIVFSGVGK+ EI+ AL+ I NVES ELKT+ A Sbjct: 85 DCVSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQ 144 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH +STG KE+KFG+ + ++ +A ++ V Sbjct: 145 SLGIKARISIRINPNIDAKTHPYLSTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 204 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 205 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 263 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 264 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLY- 322 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + + PGD + IEK GAYG+ Sbjct: 323 HAKHAIRVITPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSM 382 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR R ++L L+ Sbjct: 383 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 418 >gi|148239869|ref|YP_001225256.1| diaminopimelate decarboxylase [Synechococcus sp. WH 7803] gi|147848408|emb|CAK23959.1| Diaminopimelate decarboxylase [Synechococcus sp. WH 7803] Length = 453 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 113/424 (26%), Positives = 184/424 (43%), Gaps = 11/424 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 +G L +L LA TP Y +I + + A + ++ YA KANS+ Sbjct: 28 QGKLAVGGCALSDLAERYGTPLYVLDEASIRQACRAYREALERHYPGPSLAIYASKANSS 87 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ +A G GLD VS GEL AL +PAER+V G K+++E+ LA +SG+ Sbjct: 88 MALSALVASEGLGLDAVSAGELITALDGGMPAERMVLHGNNKSLEELALAYRSGVM-VVA 146 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +++ +L L G+ + R P I +TH+ I TG + KFG ++ + Sbjct: 147 DNQHDLDLLQTIVPEGGEPVRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDELEPVLRA 206 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 ++ G+ HIGSQI ++E ++ D R GH ++ ++VGGGLGI Y Sbjct: 207 LQGAAWARVEGLHAHIGSQIFELEPHRDLAAVMADALGLARELGHPVRDLNVGGGLGIRY 266 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSA 297 S PPS + ++ + + + EPGR LVA G+ V V + K Sbjct: 267 VSSDDPPSIDAWVQVVGTAVASACQQRNLELPRLLCEPGRSLVAPAGVTVYTVGARKVVP 326 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + + + + I G CE+GD + + Sbjct: 327 GIRTYLSVDGGMSDNPRPITYQSQYTACLADRPKAEAEETVTIAGKHCESGDVLLKDLPF 386 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 G++L + TGAY S YN ++V G++ +++ R ++L+ D +P Sbjct: 387 PACTSGEILVVLATGAYNVSMSSNYNRIPRPATVLVKGAEAELVQRREQPEDLLRYDLLP 446 Query: 418 AWLQ 421 LQ Sbjct: 447 ERLQ 450 >gi|68171181|ref|ZP_00544588.1| Diaminopimelate decarboxylase [Ehrlichia chaffeensis str. Sapulpa] gi|88658344|ref|YP_507301.1| diaminopimelate decarboxylase [Ehrlichia chaffeensis str. Arkansas] gi|67999412|gb|EAM86054.1| Diaminopimelate decarboxylase [Ehrlichia chaffeensis str. Sapulpa] gi|88599801|gb|ABD45270.1| diaminopimelate decarboxylase [Ehrlichia chaffeensis str. Arkansas] Length = 420 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 175/417 (41%), Positives = 251/417 (60%), Gaps = 4/417 (0%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y L ENV++ +A V TP YCYS AI+ NY F +++VCYA+K+N Sbjct: 8 FFHYKNNILSIENVNVLDIAKNVGTPVYCYSLNAIKNNYRQFQENLP-NNSIVCYAVKSN 66 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN +++ L LG+G D+VSEGE+RRA+AA + +IVFSGVGKT EI+ AL + I F Sbjct: 67 SNLSILSLLNSLGAGADVVSEGEIRRAIAAGISPNKIVFSGVGKTEQEINFALDNRILQF 126 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL +N A AP++ R+NP+INA+T+ KI+TG K +KFGIP + ++ Sbjct: 127 NVESIEELSLINTIACQKNIIAPVSIRINPNINADTNDKITTGLKVNKFGIPEELLDQIF 186 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +KI G+ +HIGSQI + F ++ + + + + I +D+GGGLGI Sbjct: 187 NK--DFTWIKIIGISVHIGSQISNLHIFQNTIDKIKKIIKIFKQHNTQIIRVDLGGGLGI 244 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y S P+ +YA+L+ + F N +II EPGR LV + GIL+TKV+ K + +K+ + Sbjct: 245 PYKSSDTFPTIQEYANLLKKNFENENYQIICEPGRALVGNTGILLTKVLYRKYNQEKSHI 304 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 ILD MND +RP LY+A + DIVGPICE+ D A N I + Sbjct: 305 ILDAGMNDLIRPALYNAE-HTIIPAISSTSTQLQPCDIVGPICESDDTFAHNYHIHNLQN 363 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 G+++ I GAYG+ S YNSRLLIPE+MVN S + IIR R T++++++ + I + Sbjct: 364 GEIVAICTAGAYGSSMSSNYNSRLLIPEVMVNNSSYDIIRSRQTYEDMLKDEIILEF 420 >gi|325125935|gb|ADY85265.1| Diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 436 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 108/418 (25%), Positives = 180/418 (43%), Gaps = 12/418 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L V +LA QTP + I + F F+ G+D V YA KA S A Sbjct: 14 GHLQIAGVDALELAAKYQTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G D+VS GEL A+ A P +++ F G K+ E++LA+ G+ +++ Sbjct: 74 IYQVINEEGGHTDVVSGGELWTAMKAGFPMDKVSFHGNNKSRAELELAVDQGVGVIILDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ L+Q + + RV P I+A+T++ I TG+ + KFG + + A Sbjct: 134 FHEIDLLSQILEEKDASSKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALEL 193 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L P +K++G+ HIGSQI + F A KL + + G+ ++VGGG GI Sbjct: 194 VLSNPRMKMAGIHAHIGSQIFDVRGFVGCADKLCQLASAWKEKYGYETDILNVGGGFGIH 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKS 296 Y +P + ++ I + + + I +EPGR +V G + V S K Sbjct: 254 YTDQDQPLPAEEFVRAIVKEVKSKCQENNLKLPAIWIEPGRSIVGPAGFSLYTVGSRKDL 313 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 D + + + ++VG CE+GD + + Sbjct: 314 PDYPSYVALDGGMGDNIRPALYQAEYSAVVADRPQAEDEERVNLVGKYCESGDILIKSCP 373 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + PGD++ + TGAYG + YN + ++ R ++ +LI D Sbjct: 374 LPKTEPGDVVALLSTGAYGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAND 431 >gi|229069071|ref|ZP_04202363.1| Diaminopimelate decarboxylase [Bacillus cereus F65185] gi|228714016|gb|EEL65899.1| Diaminopimelate decarboxylase [Bacillus cereus F65185] Length = 438 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 129/422 (30%), Positives = 189/422 (44%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L +LA TP Y Y +I F AF V YA KA Sbjct: 12 QGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCM 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + + LD+VS GEL AL A PA RI F G KT +EI +ALQ+ I CF V+ Sbjct: 72 EMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--A 183 + EL+ L+ A+ GK I RV P + A+TH+ I+TG+ + KFG + ++ Sbjct: 132 NFFELEVLHDLAMQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIR 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 +A + G+ HIGSQI + F +A ++LR ++R + ++ ++VGGG GI Sbjct: 192 FALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLVEVREQTNYVVKVLNVGGGFGI 251 Query: 243 AYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P + Y + +I +EPGR +V D G + V S+K Sbjct: 252 RYTESDTPLTLETYVRAVTSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTIYTVGSVKD 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A +E + N D I G CE+GD + + Sbjct: 312 IPGIRKYVSVDGGMTDNLRPALYSARYE-AMLANRGNDENEELVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL + TGAYG + YN + G ++ R T++ +I D Sbjct: 371 IHLPKVIASDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGND 430 Query: 415 SI 416 I Sbjct: 431 RI 432 >gi|241888591|ref|ZP_04775898.1| diaminopimelate decarboxylase [Gemella haemolysans ATCC 10379] gi|241864614|gb|EER68989.1| diaminopimelate decarboxylase [Gemella haemolysans ATCC 10379] Length = 430 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 116/427 (27%), Positives = 187/427 (43%), Gaps = 14/427 (3%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYAL 59 G L+ V + +L TP Y Y + TF N F T V +A Sbjct: 5 DGMTVENGELNISGVGVSELKAQYGTPLYVYDENMLVNQCRTFINNFKSSRFSTEVLFAS 64 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA S V++ G G+D+VS GE+ A A R F G KT +E+ AL+ G+ Sbjct: 65 KAFSCLEVLRIANREGLGVDVVSLGEIHTAYKAGYDMRRAYFHGNNKTREELQYALEVGV 124 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 +++ E + +N+ G + R+N I+A+TH+ I T K + KFG ++ Sbjct: 125 GTIVIDNNYEYEMINKIVRESGNTVDVLLRINTGIDAHTHEYIKTAKDDSKFGYSVYDET 184 Query: 180 SLYAYASTLPGVKISG--VDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDV 236 A ++ HIGSQI + SF +A K++ + T++ G I +++ Sbjct: 185 IYDLIADINNQSNLNFVGFHSHIGSQIFEKTSFFEAVKVVMEFTRRVQERLGLTISVLNL 244 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTK 289 GGG G+ Y + RP +++ + ++EPGR L + G + Sbjct: 245 GGGFGVYYTEEDRPFELAEFLREYIEVVERESDNFGLDLTKVVIEPGRSLTCNAGSTLYS 304 Query: 290 VISIKKS-ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V +KK+ A + +V +D M D R LY A +E + N + + G CE+G Sbjct: 305 VGGVKKTFAGREYVFVDGGMADNPRYALYKAKYE-AMLANKMNEEADATYTVAGKCCESG 363 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + ++ K+ GDLL + TGAY S YN +P + V ++ T + Sbjct: 364 DMLVMDAKLPRAEQGDLLLVSSTGAYNYSMSSNYNRLPKLPVVFVKDGTSRLVVKGETLE 423 Query: 409 ELIELDS 415 +LI D Sbjct: 424 DLIRQDI 430 >gi|317970388|ref|ZP_07971778.1| diaminopimelate decarboxylase [Synechococcus sp. CB0205] Length = 459 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 117/425 (27%), Positives = 183/425 (43%), Gaps = 15/425 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 +G L L LA TP Y + N + A + YA KANS+ Sbjct: 36 KGGLEVGGCGLSDLARRYGTPLYVLDEATLRGNAQAYRKALASHYPGSALALYASKANSS 95 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ +A G GLD VS GEL A+ +P ERIVF G K+++E+ LA G+ Sbjct: 96 LAITAVVASEGLGLDAVSAGELLTAVQGGMPPERIVFHGNNKSLEELQLAADLGVTVVAD 155 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ L + + R P I +TH+ I TG + KFG Q+ + + Sbjct: 156 NW---SDLELLASLGLSQPVRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEPVLRH 212 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 +SG+ HIGSQI +++ ++ D + R GH + ++VGGGLGI Y Sbjct: 213 LQGCSWALVSGLHAHIGSQIFELQPHRDLAAVMADALKLARELGHPVSDLNVGGGLGIRY 272 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSA 297 PPS ++ + + + EPGR LVA G+ + V S K+ Sbjct: 273 VESDDPPSIDEWVRTVAEAVAGACQDRGLDLPRLLCEPGRSLVATAGVTLYSVGSRKEIP 332 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +D M+D RP Y + + P + + G CE+GD + + Sbjct: 333 GIRTYLSVDGGMSDNPRPITYQSLYTAVLADRPEAEASD-TVTLAGKHCESGDVLLKDLA 391 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + + GD+L + TGAY A + YN +MV+ +++ R +EL+ D + Sbjct: 392 LPPAQAGDVLAVFATGAYNASMASNYNRIPRPAAVMVHDGMAELVQRRELPEELLRYDVL 451 Query: 417 PAWLQ 421 P L+ Sbjct: 452 PERLR 456 >gi|239928902|ref|ZP_04685855.1| diaminopimelate decarboxylase [Streptomyces ghanaensis ATCC 14672] gi|291437228|ref|ZP_06576618.1| diaminopimelate decarboxylase [Streptomyces ghanaensis ATCC 14672] gi|291340123|gb|EFE67079.1| diaminopimelate decarboxylase [Streptomyces ghanaensis ATCC 14672] Length = 463 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 122/418 (29%), Positives = 195/418 (46%), Gaps = 12/418 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L + +++LA TP Y + AF G D V YA KA ++AV+ Sbjct: 46 GVLTVGGIDVKQLAEEFGTPAYILDEADFRARARAWRTAF-GSDADVFYAGKAFLSRAVV 104 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + L G LD+ S GEL AL+A +PA+RI F G K+ EI+ A+++G+ ++S Sbjct: 105 RWLHEEGLNLDVCSGGELATALSAGMPADRIAFHGNNKSPAEIERAVRAGVGRIVLDSFQ 164 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYAS 186 E+ + A SLGK+ + R+ + A+TH+ I+T ++ KFGIP+ A Sbjct: 165 EIVRVAHIAQSLGKRQRVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRAL 224 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYH 245 L G+++ G+ HIGSQI + F A + L +++R + ID+GGGLGIAY Sbjct: 225 QLDGLEVIGIHSHIGSQIFDMSGFEVAAHRVVGLLREIRDEHGIELPEIDLGGGLGIAYT 284 Query: 246 SDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSAD 298 SD P + A + + +I +EPGR +V + +V ++K Sbjct: 285 SDDDPREPHEIAKALTEIVTRECEAARLSTPRISVEPGRAIVGPTAFTLYEVGTVKPLEG 344 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + T + + + D + +VG CE+GD + + + Sbjct: 345 LRTYVSVDGGMSDNIRTALYDAEYSVALASRSSDAEPMLCRVVGKHCESGDIVVRDAFLP 404 Query: 359 -LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDL+ + TGAY + YN L P + V+G +I R T ++L+ LD Sbjct: 405 GDLAPGDLIAVPATGAYCRSMASNYNHVLRPPVVAVDGGGARVIVRRETEEDLLRLDV 462 >gi|15644918|ref|NP_207088.1| diaminopimelate decarboxylase (dap decarboxylase) (lysA) [Helicobacter pylori 26695] gi|2499346|sp|P56129|DCDA_HELPY RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|2313384|gb|AAD07356.1| diaminopimelate decarboxylase (dap decarboxylase) (lysA) [Helicobacter pylori 26695] Length = 405 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 159/396 (40%), Positives = 233/396 (58%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL T+ A Sbjct: 65 DCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIETIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLSDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FV++D MNDF+RP+LY Sbjct: 244 GILNSLQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLY- 302 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ P+ R D+VGP+CE+ D + + PGD L IEK GAYG+ Sbjct: 303 HAKHAIRVITPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 398 >gi|258507107|ref|YP_003169858.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus GG] gi|257147034|emb|CAR86007.1| Diaminopimelate decarboxylase [Lactobacillus rhamnosus GG] gi|259648477|dbj|BAI40639.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus GG] Length = 447 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 172/427 (40%), Gaps = 12/427 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ EG L ++ +LAH QTP Y Y AI F F+ G+ V YA Sbjct: 1 MNFATNHEGQLTIGGIAASQLAHTFQTPLYVYDVGAIRHQIRAFKQVFETAGVAYAVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + A+ + +D+VS GEL A AA P E++ F G K+ E++ AL +G Sbjct: 61 SKAFATIAMYEVAKAEAIHVDVVSGGELYTAQAADFPMEKVSFHGNNKSKAELEQALDAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL L++ + K + RV P I+A+TH TG+ + KFG + Sbjct: 121 VGTIIVDNFHELDLLDELLKAAVGKQNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESG 180 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIE---SFHKAFKLLRDLTQQLRSNGHNIQHID 235 + A L ++ + +H E KLL L + + ++ Sbjct: 181 QADEAAKRILADDHLNLLGIHAHIGSQIFEVAGFEAVTQKLLAVLDHWHQQFSFTPKVLN 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVT 288 VGGG GIAY P + F + +EPGR +V G + Sbjct: 241 VGGGFGIAYTKQDDPLPPEAFVQAIVTTLKTQSHGFNWPLPAVWIEPGRSIVGPAGYSLY 300 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V S K + + + + H +VG CE+G Sbjct: 301 TVGSRKDVPGLRPYVAVDGGMGDNIRPALYQAQYTAVVADHPTAQPTEHVHLVGKYCESG 360 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + +PGD++ + TGAYG + YN + V Q ++ R T+ Sbjct: 361 DILIDDAPLPATQPGDVVAVFDTGAYGYSMASNYNRNPRPAVVFVEDGQAQLVVTRETYA 420 Query: 409 ELIELDS 415 +LI+ D Sbjct: 421 DLIQHDQ 427 >gi|318040226|ref|ZP_07972182.1| diaminopimelate decarboxylase [Synechococcus sp. CB0101] Length = 466 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 116/425 (27%), Positives = 184/425 (43%), Gaps = 15/425 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 EG L L LA TP Y + + A + YA KANS+ Sbjct: 43 EGRLVVGGCVLSDLARRYGTPLYVLDEATLRGTAQAYRKALASHYPGSALALYASKANSS 102 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ +A G GLD VS GEL A+ +P ERIVF G K+++E+ LA++ G+ Sbjct: 103 LAITAVVASEGLGLDAVSAGELLTAVQGGMPPERIVFHGNNKSLEELRLAVELGVTVVAD 162 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 + + + + + + R P I +TH+ I TG + KFG Q+ + + Sbjct: 163 NWLDIEQLAS---LEMAQPVRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEGVLQH 219 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 ++SG+ HIGSQI +++ ++ D + R GH + ++VGGGLGI Y Sbjct: 220 LKQCSWAQVSGLHAHIGSQIFELQPHRDLAAVMADALKLAREMGHPVSDLNVGGGLGIRY 279 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSA 297 PPS + + + + + EPGR LVA G+ + V S K Sbjct: 280 VESDDPPSIDAWVLTVAEAVAAACQERGLDLPRLLCEPGRSLVATSGVTLYSVGSRKDIP 339 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +D M+D RP Y + + P + + G CE+GD + + Sbjct: 340 GIRTYLSVDGGMSDNPRPITYQSQYTAVLADRPEAEPSD-SVTLAGKHCESGDVLLKDLA 398 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD+L + TGAY A S YN +MV+ +++ R ++L+ D + Sbjct: 399 LPPATSGDVLAVFATGAYNASMSSNYNRIPRPAAVMVHNGLSEVVQRREQPEDLLRYDVL 458 Query: 417 PAWLQ 421 P L+ Sbjct: 459 PERLR 463 >gi|51892948|ref|YP_075639.1| diaminopimelate decarboxylase [Symbiobacterium thermophilum IAM 14863] gi|51856637|dbj|BAD40795.1| diaminopimelate decarboxylase [Symbiobacterium thermophilum IAM 14863] Length = 443 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 136/432 (31%), Positives = 196/432 (45%), Gaps = 15/432 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQ 65 +G L V + LA TP Y I +N + AF D V YA KA Sbjct: 12 QGHLTIGGVDVVDLAREFGTPLYVMDEELIRQNCRAYVAAFRDHYPDFDVAYASKAFLCT 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ +A G LD+VS GE+ AL A P +R F G KT +EI LAL++G+ F V+ Sbjct: 72 AMAALVAQEGLSLDVVSGGEIATALQAGFPMDRTYFHGNNKTAEEIRLALEAGVGRFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHSLYA 183 S EL+ LN+ A G A RV P + A+TH+ ISTG+ + KFGIPI Q Sbjct: 132 SLHELELLNRLAGERGTTARALLRVTPGVEAHTHEYISTGQLDSKFGIPIEGGQALDAAR 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGI 242 A V++ G HIGSQI + + A + +R + +GGGLG+ Sbjct: 192 AALQADHVELLGFHCHIGSQIFDLTGYRVAADRMLAFAAAVREETGFTPSELSLGGGLGV 251 Query: 243 AYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKK 295 Y RP +D + + + + K+I+EPGR +VA+ G + V +IK+ Sbjct: 252 RYVEGDRPLPPADLVACLAEAVRSGAAERALPLPKLIVEPGRSIVAEAGTTLYTVGTIKE 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI-AL 353 +D M D +RP LY A +E +R I +VG CE+GD + Sbjct: 312 IPGVRTYLSVDGGMGDNIRPALYHARYECAVANKLDSERTRI-VTVVGRYCESGDVLLTD 370 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 A PGDLL + TGAY + YN + V + ++ R TF ++ Sbjct: 371 AAVAADVAPGDLLAVFATGAYNYSMASRYNRFPTPAVVFVRDGRADLVVRRETFADMAAC 430 Query: 414 DSIPAWLQKTPK 425 D +P + + Sbjct: 431 DVLPPRFRPRAE 442 >gi|729299|sp|P41023|DCDA_BACMT RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|304155|gb|AAC36985.1| diaminopimelate decarboxylase [Bacillus methanolicus MGA3] Length = 432 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 123/411 (29%), Positives = 185/411 (45%), Gaps = 14/411 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 +G L V +LA TP Y Y I + F N FD G+ V YA KA S Sbjct: 11 EKGHLEIGGVDTIELAQKYGTPLYVYDVALIRERARGFKNTFDELGIKAQVAYASKAFST 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+I+ G LD+VS GEL AL A P +I F G K+ E+++AL+ I C V Sbjct: 71 VAMIQLAEEEGLSLDVVSGGELYTALVAGFPVHKIHFHGNNKSRAELEMALEHQIGCIVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA- 183 ++ EL ++ K I RV P I A+TH I TG+++ KFG + + A Sbjct: 131 DNFHELDLIDSICSEKNVKTNILLRVTPGIEAHTHDYILTGQEDSKFGFDLQNGQAEKAL 190 Query: 184 -YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 A V++ GV HIGSQI F A + + + ++ + + + +++GGG G Sbjct: 191 QIALNSNFVEVLGVHCHIGSQIFDTTGFVLAARKIFEKLKEWKDRLSYEPKVLNLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y + P +S Y I + +I +EPGR LV D G + ++ S K Sbjct: 251 IRYTEEDDPIPASQYVKEIINEVKKQVSAYSMKMPEIWIEPGRSLVGDAGTTLYQIGSRK 310 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + +D M+D +RP LY+A +E P I G CE+GD + Sbjct: 311 DVPNVRHYVAVDGGMSDNIRPALYNAKYEAVLANKPLAKAD-ETVSIAGKCCESGDMLIW 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPR 404 + + D+L + TGAYG + YN + V + ++ R Sbjct: 370 DLPLPKADSDDILAVFCTGAYGYSMANNYNRIPRPAVVFVENGESMLVVKR 420 >gi|150399267|ref|YP_001323034.1| diaminopimelate decarboxylase [Methanococcus vannielii SB] gi|150011970|gb|ABR54422.1| diaminopimelate decarboxylase [Methanococcus vannielii SB] Length = 436 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 152/430 (35%), Positives = 226/430 (52%), Gaps = 16/430 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCY 57 +G L + +LA + +TP Y S T KN+ + +F G +T+ + Sbjct: 9 LTVKDGKLKIDGHDAGELAKMYETPLYVMSETQTVKNFERYVESFKEYSEKTGKETIFSF 68 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A KAN+N A+ K L+ LG G DIVS GEL A + VP+E+IVF+G K +EI + +++ Sbjct: 69 AYKANTNLALTKLLSKLGCGADIVSAGELYIAKISNVPSEKIVFNGNCKLKEEIKMGIET 128 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH- 176 I FNV+S S+L +N+ A +GK A +AFRVNP+++ TH KISTG K++KFG+ I Sbjct: 129 KIRAFNVDSISDLILINETAKEMGKIANVAFRVNPNVDPKTHPKISTGMKKNKFGLDIES 188 Query: 177 -QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 A + VKI G+ HIGSQ+ +I F + + + D L++ G NI ++ Sbjct: 189 GIALQTIKMAEKMENVKIVGIHCHIGSQLTEISPFVEETRKIMDFVVLLKNEGININDVN 248 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 +GGGLGI Y P D A + +ILEPGR +VA G+L+ V Sbjct: 249 LGGGLGIPYDKQKVIPVQKDLAKAILSVIYEYESKIELPNLILEPGRSIVATSGVLLGTV 308 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 IK + ++++D MND MRP +Y+AYHEI + I G +CE+ D Sbjct: 309 KHIKDTPVAKWIMIDAGMNDMMRPAIYEAYHEITSCTLRS---EKEVVSIAGGLCESSDV 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 +R+++ D + I GAYG + YNSR ++ + + IIR R T +L Sbjct: 366 FGKDRELSKIEVNDTIAILDVGAYGISMANNYNSRGKPAMVLTSEKEVSIIRERETLADL 425 Query: 411 IELDSIPAWL 420 I D +P L Sbjct: 426 ISKDIVPNHL 435 >gi|293399853|ref|ZP_06643999.1| diaminopimelate decarboxylase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306253|gb|EFE47496.1| diaminopimelate decarboxylase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 429 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 127/422 (30%), Positives = 198/422 (46%), Gaps = 14/422 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 + LH + VS+E+LA QTP Y Y I + F F D T V YA KA S Sbjct: 3 KDNVLHIQGVSVEQLATACQTPLYIYDENKITEKLSRFHELFQSDTFKTEVLYASKAFSC 62 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +A+++ +A G LD+VS GEL A A P ER+ F G K+ DEI +AL G+ V Sbjct: 63 KAMVELVAQYGLSLDVVSGGELYTAKQAGFPMERVYFHGNNKSYDEIMMALDYGVGTIIV 122 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E L + G+ RVNP + A+THK I T + KFGI I + + A Sbjct: 123 DNAMECDMLVKAVKRSGRSIKTMLRVNPGVEAHTHKYIVTAHLDSKFGISITKKKEIAAM 182 Query: 185 ASTL---PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGL 240 TL + G HIGSQI +++ + L T+++++ +I +++GGG Sbjct: 183 IHTLTSVAEITFLGYHSHIGSQIFDKQAYVAEIEKLMQFTKEMQTEYDIHISALNLGGGF 242 Query: 241 GIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 Y + P D + KI++EPGR +VA+ G + +V Sbjct: 243 AALYTNADHPIPLQDVCHTILDTCKKENAKQQLNIEKIMIEPGRSIVAEAGSTLYRVGYQ 302 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K++ K ++ +D M+D +RP LY A + + D+ I G CE+GD + Sbjct: 303 KQTEHKKYIFVDGGMSDNIRPALYQAEYACDIANRMQEDK-TETVTIAGKCCESGDILIE 361 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 N K+ DLL I TGAYG + YN + V ++ + +++ +++L Sbjct: 362 NAKLPKVSQNDLLIIYTTGAYGYSMASNYNKLGRPAVVFVKDGHARVVIKKESYENMLDL 421 Query: 414 DS 415 + Sbjct: 422 EC 423 >gi|260435338|ref|ZP_05789308.1| diaminopimelate decarboxylase [Synechococcus sp. WH 8109] gi|260413212|gb|EEX06508.1| diaminopimelate decarboxylase [Synechococcus sp. WH 8109] Length = 459 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 113/422 (26%), Positives = 186/422 (44%), Gaps = 13/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 L L LA TP Y + + A + ++ YA KANS+ Sbjct: 35 DRLVVGGCRLSDLAERYGTPLYVLDEATVRATCRAYRQALEKHYAGPSLPIYASKANSSL 94 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + A G GLD VS GEL AL +P ER+V G K+ +E+ L + V+ Sbjct: 95 VMSSLAASEGLGLDAVSAGELLTALHGGMPGERMVLHGNNKSDEEL-LLAYANKVTIVVD 153 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 ++ +L L + + + A + R P I +TH+ I TG + KFG Q+ + Sbjct: 154 NQHDLDRLAELVPAGAEPARLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQVEPVLRSL 213 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 P +++G+ HIGSQI ++E ++ D + R GH + ++VGGGLGI Y Sbjct: 214 VGQPWSQLTGLHAHIGSQIFELEPHQDLAAVMADKLKLARDLGHPVSDLNVGGGLGIRYV 273 Query: 246 SDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSAD 298 PPS + ++ + + + + EPGR LVA G+ + V S K + Sbjct: 274 ESDDPPSIEQWIQVVAEAVTSACQERGLELPRLMCEPGRSLVATAGVTLYSVGSRKTIPN 333 Query: 299 KTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + +D M+D RP Y + + + + + ++VG CE+GD + N + Sbjct: 334 VRTYVAIDGGMSDNPRPITYQSLYTC-CLADRPLAKPDESVNLVGKHCESGDVLLKNLAL 392 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 GD++ + TGAY A S YN ++V+ +++ R +L+ D +P Sbjct: 393 PTTESGDIVAVFATGAYNASMSSNYNRIPRPAAVLVHDGAAELVQKREQPDDLLRYDVLP 452 Query: 418 AW 419 Sbjct: 453 ER 454 >gi|227893383|ref|ZP_04011188.1| diaminopimelate decarboxylase [Lactobacillus ultunensis DSM 16047] gi|227864798|gb|EEJ72219.1| diaminopimelate decarboxylase [Lactobacillus ultunensis DSM 16047] Length = 437 Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 114/422 (27%), Positives = 186/422 (44%), Gaps = 14/422 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSN 64 +G L V L +LA TP Y I F F+ V YA KA S Sbjct: 12 EQGHLTIGGVDLVELAKKYGTPLIVYDVEQIRHQIRAFKKVFEEEGVKYAVSYASKAFSC 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + G+ D+VS GEL AL P E I F G K++ E+++A++ + + Sbjct: 72 VAMYQVAEQEGAYTDVVSAGELYTALKTNFPVEHISFHGNNKSLAELEMAVKHHVGKIII 131 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA- 183 ++ E+K L+Q K + R+ P I+A+TH+ TG+ + KFG + + A Sbjct: 132 DNFHEIKLLDQVLKEQNAKIDVMLRITPGISADTHEYDQTGQVDSKFGFDLESGQADLAL 191 Query: 184 -YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLG 241 + + G+ HIGSQI ++ F A K L ++ + R+ + + I+VGGG G Sbjct: 192 EQVLNNSRMNLVGIHAHIGSQIFELNGFEMAAKKLMEVAENWRNQYGYTAKVINVGGGFG 251 Query: 242 IAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y ++ P + + +I +EPGR +V G + S K Sbjct: 252 IKYTAEDNPLRPEKFVQAIVETIKTEAERASFPVPEIDIEPGRSIVGPAGYNLYTTGSRK 311 Query: 295 KSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + +D M D +RP LY A +E +P H I G CE+GD +A Sbjct: 312 VIPGHRPYVAVDGGMGDNIRPALYQAKYESVLASDPQAPS-TEHVRIAGKYCESGDILAE 370 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 ++ + + + G L+ + TGAYG + YN + + ++ R + ++L+ L Sbjct: 371 DQALPVTKAGSLIAMLDTGAYGYSMASNYNRNPRPAVVFAEKGKAKVVIKRESLEDLVHL 430 Query: 414 DS 415 D Sbjct: 431 DQ 432 >gi|288573425|ref|ZP_06391782.1| diaminopimelate decarboxylase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569166|gb|EFC90723.1| diaminopimelate decarboxylase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 426 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 111/421 (26%), Positives = 189/421 (44%), Gaps = 14/421 (3%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKT 70 + + +LA TP Y S T + + AF D V YA KA +A+ Sbjct: 6 FDGCDVTELAERFGTPLYVMSETELRRRMRAVKRAFSERYEDVEVLYAGKAFLPRAMCAL 65 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + G GLD+VS GE+ A++ P ER F G KT +++ +A+ G+ F V++ EL Sbjct: 66 VKSEGLGLDVVSSGEIHTAVSVGFPMERAYFHGNNKTAEDLTMAMDVGVGRFVVDNRDEL 125 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAYASTL 188 L A + + FR+ P ++ +TH+ I T + KFG+P+ + A+ Sbjct: 126 DLLASMAEERKTEVSVLFRLAPGVSGDTHRYIQTAHTDCKFGMPLLGEGLRDCVDTATKA 185 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ--------QLRSNGHNIQHIDVGGGL 240 P VK+ G H+GSQ+ + ++ +A ++L DL + + + G Sbjct: 186 PYVKLLGFHFHVGSQLMENRAYLEALEVLGDLMKTLREENGFETKELNIGGGIGIPYGKG 245 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 D + A I G + ++++EPGR++ GI + +V ++K+ Sbjct: 246 QREVDLDFFLGCIVETAERICSERGMARPRLVIEPGRWIAGPSGITLYRVGTVKEIPGIR 305 Query: 301 FV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 +D M D RP+LY A + N D + G CE+GD + + ++ L Sbjct: 306 TYVSVDGGMADNPRPSLYQAEYRCVL-ANRLDDPADSVVTVAGRCCESGDILIKDAELPL 364 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P GD++ + TGAY + YN ++V + I R +F +LI+ +S+P Sbjct: 365 PERGDVVAVFDTGAYNFSMASGYNRLRRPAVVLVKDGEARCIVERQSFDDLIKGESVPED 424 Query: 420 L 420 L Sbjct: 425 L 425 >gi|227544852|ref|ZP_03974901.1| diaminopimelate decarboxylase [Lactobacillus reuteri CF48-3A] gi|300909927|ref|ZP_07127387.1| diaminopimelate decarboxylase [Lactobacillus reuteri SD2112] gi|227185172|gb|EEI65243.1| diaminopimelate decarboxylase [Lactobacillus reuteri CF48-3A] gi|300892575|gb|EFK85935.1| diaminopimelate decarboxylase [Lactobacillus reuteri SD2112] Length = 441 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 120/419 (28%), Positives = 190/419 (45%), Gaps = 14/419 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQA 66 G L LAH TP Y I + F F+ +D V YA KA S A Sbjct: 19 GHLTIGGCDAVDLAHQFGTPLVVYDVQQIRQQIRAFKRVFEENNVDYAVSYASKAFSAIA 78 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + +A G+ +D+VS GEL A+ A P + F G K+ +E+++A+ + +++ Sbjct: 79 MYQVVAAEGAHVDVVSGGELYTAIKAGFPMADVSFHGNNKSREELEMAIDHHVGTIMIDN 138 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E++ L L + R+ P I+A+T+K I TG+ + KFG + + A A Sbjct: 139 FHEIELLADVLEKLDAHVDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALAK 198 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L P +++ G+ HIGSQI ++ F A KL+ + I+VGGG GI Sbjct: 199 VLENPRMQMKGLHAHIGSQIFELAGFEGVAKKLVEVAAHWQEKFNYQAAVINVGGGFGIR 258 Query: 244 YHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P + ++ + I + I +EPGR + G + V S K Sbjct: 259 YVKDDTPLAPEEFVAAIIKAIKAEIKETNLAMPAIWIEPGRSIAGPAGYNLYTVGSRKDV 318 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D +RP LY+A +E NP + L H + G CE+GD ++ N+ Sbjct: 319 PGLKPYVTVDGGMGDNIRPALYEAQYETVLANNPRAE-LVEHVRVAGKYCESGDILSQNQ 377 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + +PGD+L + TGAYG + YN + ++ R T+ +L+ LD Sbjct: 378 VLPATKPGDVLAMLDTGAYGYSMASNYNRNPRPAVVFAEKGTAQVVIKRETYDDLVHLD 436 >gi|329769060|ref|ZP_08260482.1| diaminopimelate decarboxylase [Gemella sanguinis M325] gi|328839551|gb|EGF89127.1| diaminopimelate decarboxylase [Gemella sanguinis M325] Length = 430 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 111/427 (25%), Positives = 188/427 (44%), Gaps = 14/427 (3%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYAL 59 + L V++ +L TP Y Y +E TF + F T V YA Sbjct: 5 NGMTVENNELAISGVTVSELRRKYGTPLYVYDENMLENQCDTFISNFKSEKFKTEVLYAS 64 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA S V++ G G+D+VS GE+ A A + F G KT +E+ A++ G+ Sbjct: 65 KAFSCLEVLRMANRAGLGVDVVSLGEIHTAYKAGYDMSKAYFHGNNKTREELKYAIEVGL 124 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++++ E + +N A K + R+N I+A+TH+ I T K + KFG ++ Sbjct: 125 GTIVIDNDYEYEMINDLAKESKKTVDVLLRINTGIDAHTHEYIKTAKDDSKFGYSVYDET 184 Query: 180 SLYAYASTLPGVKISG--VDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDV 236 A ++ HIGSQI + SF++A K++ + +++ I+ +++ Sbjct: 185 IFDLIADINGQSNLNFLGFHSHIGSQIFEKSSFYEAAKVVMEFSRRVEEELRLTIKVLNL 244 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTK 289 GGG G+ Y + +P ++ + ++EPGR L + G + Sbjct: 245 GGGFGVYYTDEDKPFELGEFLQEYIKVIETESENFGLELEKVVIEPGRSLTCNAGSTLYT 304 Query: 290 VISIKKS-ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V +KK+ A + ++ +D M D R LY A +E D + + G CE+G Sbjct: 305 VGGVKKTFAGREYIFVDGGMADNPRYALYKAKYEAALANKINADENTV-YTVAGKCCESG 363 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + ++ K+ GDLL + TGAY S YN +P + V ++ T + Sbjct: 364 DMLVMDTKLPKAEQGDLLIVPSTGAYNYSMSSNYNRLPKLPVVFVKDGTSRLVIKGETLE 423 Query: 409 ELIELDS 415 +LI D Sbjct: 424 DLIRQDI 430 >gi|169628525|ref|YP_001702174.1| diaminopimelate decarboxylase [Mycobacterium abscessus ATCC 19977] gi|169240492|emb|CAM61520.1| Probable diaminopimelate decarboxylase [Mycobacterium abscessus] Length = 470 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 117/427 (27%), Positives = 189/427 (44%), Gaps = 21/427 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + +++ +LA TP + + AF G V YA KA V Sbjct: 44 DGEVTLAGLAVSELAEQYGTPLFVIDEDDFRSRCRDMAAAFGGA-ARVHYASKAFLCTEV 102 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G GLD+ S GEL AL A P ERI G K+ E+ A+Q+G+ V+S Sbjct: 103 ARWIKDEGLGLDVCSAGELAVALRAEFPPERIALHGNNKSEAELAQAVQAGVGHIVVDSM 162 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAYA 185 E+ L+ A G + RV + A+TH+ IST ++ KFG+ + Q Sbjct: 163 IEIDRLDAIAGRAGVVQDVLVRVTVGVEAHTHEFISTAHEDQKFGLSLAGGQALEAVRRV 222 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGL 240 +++ G+ HIGSQI ++ F A + + + + ID+GGGL Sbjct: 223 FATDNLRLVGLHSHIGSQIFDVDGFEVAAHRVIGLLRDVVAEFGTDKTAQLNIIDLGGGL 282 Query: 241 GIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 GI+Y PP D A G ++++EPGR + + + +V + Sbjct: 283 GISYVPSDDPPPIEDLAAKLGVIVRTESALAGLPGPRLVIEPGRAIAGPGTVTLYRVGTT 342 Query: 294 KK----SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K + + +V +D M+D +R +LY A + +V+ D + + +VG CE+GD Sbjct: 343 KDVILSNGQRRYVSVDGGMSDNIRTSLYQAEYH-PQLVSRDSDVAPVLSRVVGKHCESGD 401 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + + PGDLL + TGAY S YN I V + +I R T + Sbjct: 402 IVVRDAWLPEDVAPGDLLAVAATGAYCYSMSSRYNLLTRPAVIAVKDGRARLILRRETVE 461 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 462 DLVSLEV 468 >gi|150402373|ref|YP_001329667.1| diaminopimelate decarboxylase [Methanococcus maripaludis C7] gi|150033403|gb|ABR65516.1| diaminopimelate decarboxylase [Methanococcus maripaludis C7] Length = 436 Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 151/430 (35%), Positives = 226/430 (52%), Gaps = 16/430 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCY 57 +L + +LA TP Y S T KN+ + ++F G + ++ + Sbjct: 9 LTVEGKNLKIDGYDASELAKTYGTPLYVMSETQTVKNFTRYVDSFKEYSEKTGKEFIISF 68 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A KAN+N AV K L+ LG G DIVS GEL A + VP+E+IVF+G K +EI + +++ Sbjct: 69 AYKANTNLAVTKLLSKLGCGADIVSAGELYIAKLSNVPSEKIVFNGNCKLKEEIKMGIEA 128 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH- 176 I FNV+S SEL +N+ A +GK A +AFRVNP+++A TH KISTG K++KFG+ I Sbjct: 129 EIRAFNVDSISELVLINETAKEMGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIES 188 Query: 177 -QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 A + VKI G+ HIGSQ+ I F + + + D L++ G I+ ++ Sbjct: 189 GIALETIKMAEKMENVKIVGIHCHIGSQLTYISPFVEEARKIMDFVVSLKNEGIEIKDVN 248 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 +GGGLGI Y + + P D + + +ILEPGR LVA G+L+ V Sbjct: 249 LGGGLGIPYDKNTKIPVQKDLSKAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTV 308 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 +K++ ++++D MND MRP +Y+AYHEI + G +CE+ D Sbjct: 309 EHVKETPVAKWIMIDAGMNDMMRPAIYEAYHEIVPCTIRD---EKEVVSVAGGLCESSDV 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 +R+++ D + I GAYG + YNSR I+ N + +IR R T +L Sbjct: 366 FGKDRELSKMEVKDTVAILDVGAYGISMANNYNSRGKPAMILTNEKEVSLIRVRETLADL 425 Query: 411 IELDSIPAWL 420 I D +P L Sbjct: 426 ISKDIVPNHL 435 >gi|145596164|ref|YP_001160461.1| diaminopimelate decarboxylase [Salinispora tropica CNB-440] gi|145305501|gb|ABP56083.1| diaminopimelate decarboxylase [Salinispora tropica CNB-440] Length = 470 Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats. Identities = 126/429 (29%), Positives = 194/429 (45%), Gaps = 24/429 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G+L S+ LA T Y + F AF D V YA KA +AV Sbjct: 44 DGALAVAGCSVRDLAAEFGTSVYLLDEEDLRSRCRDFRAAFPTED--VYYAGKAFLCRAV 101 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ S GEL ALAA VP ERI F G K+I E+ AL G+ V+S Sbjct: 102 ARMVAEEGLHLDVCSGGELATALAAGVPPERIGFHGNNKSIAELSRALDVGVGRIIVDSS 161 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ L A G + + RV + A+TH+ I+T ++ KFG + + ++ A Sbjct: 162 HEIDRLTALARERGVRPRVLVRVTVGVEAHTHEFIATAHEDQKFGFSLAEGAAIAAVLRI 221 Query: 188 LPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAY 244 L ++ G+ HIGSQI F + + + L Q+R G + +D+GGG GIAY Sbjct: 222 LDEDVLELRGLHSHIGSQIFDASGFEVSARRVLALQAQIRDARGVQLPELDLGGGFGIAY 281 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVI------ 291 S P + +D A + + + +EPGR +V + +V Sbjct: 282 TSQDDPATPADLAKRLRKIVDGECAAERLAVPHLSIEPGRAIVGPAMFTLYEVGTVKSVP 341 Query: 292 ----SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 + +V +D M+D +R LYDA + + + A + A +VG CE+ Sbjct: 342 VGTGGDAVDGRRCYVSVDGGMSDNIRTALYDASY-SATLASRASVAEPVLARVVGKHCES 400 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 GD + + + +PGDL+ + TGAY + YN P + V + +I R T Sbjct: 401 GDIVVKDEFLPADVQPGDLVAVPGTGAYCRSMASNYNHVPRPPVVAVRDGRARLIVRRET 460 Query: 407 FQELIELDS 415 ++L+ LD Sbjct: 461 EEDLLALDV 469 >gi|194468402|ref|ZP_03074388.1| diaminopimelate decarboxylase [Lactobacillus reuteri 100-23] gi|194453255|gb|EDX42153.1| diaminopimelate decarboxylase [Lactobacillus reuteri 100-23] Length = 436 Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats. Identities = 118/419 (28%), Positives = 187/419 (44%), Gaps = 14/419 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQA 66 G L LAH TP Y I F F+ +D V YA KA S A Sbjct: 14 GHLTIGGCDAIDLAHRFGTPLVVYDVQQIRHQIRAFKQVFEENSVDYAVSYASKAFSAIA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + +A G+ +D+VS GEL A+ A P + F G K+ +E+++A+ + +++ Sbjct: 74 MYQVVAVEGAHVDVVSGGELYTAIKAGFPMANVSFHGNNKSREELEMAIDHHVGTIMIDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E++ L + R+ P I+A+T+K I TG+ + KFG + + A Sbjct: 134 FHEIELLADVLEEHDAHVDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALTK 193 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L P +++ G+ HIGSQI ++ F A KL+ + I+VGGG GI Sbjct: 194 VLENPRMQMKGLHAHIGSQIFELAGFEGVAKKLVEVAAHWQEKFNYQAAVINVGGGFGIR 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P + ++ + I + I +EPGR + G + V S K Sbjct: 254 YVKDDTPLAPEEFVAAIIKAIKTEIKETNLAMPAIWIEPGRSIAGPAGYNLYTVGSRKDV 313 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D +RP LY+A +E NP + + H + G CE+GD ++ N+ Sbjct: 314 PGLKPYVTVDGGMGDNIRPALYEAQYETVLANNPRAEVV-EHVRVAGKYCESGDILSQNQ 372 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + +PGD+L + TGAYG + YN + ++ R T+ +LI LD Sbjct: 373 ALPATKPGDVLAMLDTGAYGYSMASNYNRNPRPAVVFAEKGTAQVVIKRETYDDLIHLD 431 >gi|222824355|ref|YP_002575929.1| diaminopimelate decarboxylase [Campylobacter lari RM2100] gi|222539576|gb|ACM64677.1| diaminopimelate decarboxylase [Campylobacter lari RM2100] Length = 401 Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats. Identities = 164/399 (41%), Positives = 230/399 (57%), Gaps = 4/399 (1%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + KLA TPFY Y I++ +L AF + + YA+KANSN +V+K L L Sbjct: 1 MDYLKLAKQYNTPFYIYDFDKIKERFLLLKEAFKARKSQIFYAVKANSNLSVLKLLVSLD 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE+ RAL A +I+FSGVGK+ DE+ AL+ I N+ES E+ L Q Sbjct: 61 SGFDCVSAGEIYRALKAGAKNYKIIFSGVGKSADELKYALEQNILYVNLESYEEMLLLEQ 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A K A I+ RVNP+++A TH ISTG E+KFG+ I +Y YA + Sbjct: 121 IAKESQKIARISIRVNPNVDAKTHPYISTGLHENKFGVDIESAKKMYIYAKNSQFLDPVS 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQI I S H+A ++ L ++L NI+ D+GGGLG+ Y + + P+ D Sbjct: 181 VHFHIGSQILDISSIHEASVIVAKLVKELLVLKINIKFFDIGGGLGVCYKDE-QEPNLYD 239 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I +EPGRFLVA+ G +TKV+ K + K FVI+D AMND +RP+ Sbjct: 240 YAQGILASLQGLDVCIGMEPGRFLVANAGEFITKVLYEKFNDKKRFVIVDGAMNDLLRPS 299 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY AYHE+ + ++ DIVG +CE+GDF+A +RK+A + GDL+ ++ GAYG Sbjct: 300 LYSAYHEVKLLSE---NKEESLCDIVGGVCESGDFLAKDRKLAKTKAGDLIIVKSAGAYG 356 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + E+ +IR R ++++ I L+ Sbjct: 357 FSMSSNYNTRNRVCELACENGMVRMIRKRESYEDQIALE 395 >gi|86607495|ref|YP_476258.1| diaminopimelate decarboxylase [Synechococcus sp. JA-3-3Ab] gi|86556037|gb|ABD00995.1| diaminopimelate decarboxylase [Synechococcus sp. JA-3-3Ab] Length = 458 Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats. Identities = 103/432 (23%), Positives = 179/432 (41%), Gaps = 20/432 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 +G L + +L +P Y + + + + + V YA KA + Sbjct: 30 QGHLEIGGCDVVELVRQFGSPLYILDEWTLRHACRLYRDTWARCYPGGSQVLYATKAWNC 89 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ G GLD+ S GEL A+ A E + G K+ +E+ +AL+ G Sbjct: 90 LAICALALQEGLGLDVASGGELYTAIQAGARGEELYLHGNAKSAEELAMALEVGCTLVAD 149 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 + + + + D+ +TH+ I TG+ + KFGI Q+ ++ + Sbjct: 150 SLYELQQLAALATPARPARLLVRVNPGIDV--HTHEYIRTGQTDSKFGIGQWQLPEVFDF 207 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 + P ++ G+ HIGSQI ++ +L + +Q G +Q ++VGGGLGI Y Sbjct: 208 LAAHPQLQCVGLHAHIGSQIFDLQGHRDLAGVLAQVWRQGLEKGLPLQELNVGGGLGIRY 267 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 PPS ++ + K++ EPGR +V + + K Sbjct: 268 VESDDPPSIPEWVEAVATAVQQSFTAAGIPLPKVLCEPGRSVVGPAAVTAYTLGGKKWIP 327 Query: 298 -------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 + +V +D M+D RP Y A + + N + G CE+GD Sbjct: 328 PSEDLPEGRLYVTIDGGMSDNPRPITYGARY-TALLANRPEAEATQRVTVAGKHCESGDV 386 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + + P PG++L + +GAY + YN ++VN + +I R T+ +L Sbjct: 387 LLKDVLLPNPAPGEVLVVLTSGAYNYSMASNYNRFPRPAAVLVNQGKAQLILRRETYADL 446 Query: 411 IELDSIPAWLQK 422 I D +P LQ+ Sbjct: 447 IRQDILPERLQR 458 >gi|124485458|ref|YP_001030074.1| diaminopimelate decarboxylase [Methanocorpusculum labreanum Z] gi|124362999|gb|ABN06807.1| diaminopimelate decarboxylase [Methanocorpusculum labreanum Z] Length = 433 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 153/436 (35%), Positives = 225/436 (51%), Gaps = 17/436 (3%) Query: 1 MS---AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMV 55 M+ + G L LA TP Y + + N+ + A + + Sbjct: 1 MNLPESLSVSGGHLFCGGADCVSLAEKFGTPLYVTNENHVTGNFRRYEAALKKYTNNVQL 60 Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 YA KAN N +I++LA G+G DI S GE+R AL A +PA ++F+G KT ++ A+ Sbjct: 61 LYAAKANENPVIIQSLAREGAGADIFSLGEMRAALEAGIPAGILLFNGSSKTEADLRAAI 120 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 + I +V+S EL+ ++ L K A I FRVNP I TH KI+TG K KFGIP Sbjct: 121 EKDIM-ISVDSVDELRQIDAITKELKKTAKIGFRVNPAIEVPTHPKIATGIKNSKFGIPA 179 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 I Y A ++ V G+ HIGSQI ++E F A ++ + ++ G ++ ID Sbjct: 180 EMILEAYREALSMEYVVPVGMHCHIGSQILEVEPFAIACGVIMKVAGEVTKIGVKLEFID 239 Query: 236 VGGGLGIAYHSD---HRPPSSSDYASLIHQYFGNLQCK------IILEPGRFLVADVGIL 286 GGGLGI YH + + P+ +YA+ + F K +EPGR++V + IL Sbjct: 240 FGGGLGIPYHREGTVDKAPTPEEYAAAVMPVFLEGCKKAGISPAFWVEPGRWMVGESTIL 299 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 +T+V S+KK KTFV +D N +RP +YD++HE+ N A I GPICE Sbjct: 300 LTRVNSVKKV-HKTFVNVDAGFNLLIRPAMYDSWHEVVV-ANKADQPADGTYTITGPICE 357 Query: 347 TGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 TGD +R + GDL+ + GAYG S YNSR PE++VNG + ++R T Sbjct: 358 TGDIFGSDRALPSVVAGDLIAVLDAGAYGYSMSSQYNSRPRCPEVLVNGDKAELMRRAET 417 Query: 407 FQELIELDSIPAWLQK 422 ++E+ P+W +K Sbjct: 418 YEEMTGCVVTPSWHRK 433 >gi|254520637|ref|ZP_05132693.1| diaminopimelate decarboxylase [Clostridium sp. 7_2_43FAA] gi|226914386|gb|EEH99587.1| diaminopimelate decarboxylase [Clostridium sp. 7_2_43FAA] Length = 430 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 118/424 (27%), Positives = 195/424 (45%), Gaps = 14/424 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKAN 62 K +L + + LA TP Y + N + F + V +A KA Sbjct: 8 KIEGNNLIIGGIKAKDLAKDYGTPLYVMDEQLLIDNCRDYVKYFKVNSENNRVAFAGKAF 67 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + + + G LD+VS GEL A A P E+I F G KT++EI+ ++ G+ F Sbjct: 68 LTLEMCRLIDREGLYLDVVSGGELYTAYKANFPMEKIYFHGNNKTLEEIEFGIKLGVGRF 127 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V++ E+ +N+ + K + R+ P I A+TH+ I TG+ + KFG + Sbjct: 128 IVDNLWEMIKINEISEKYNKVQKVYLRLTPGIEAHTHEYIKTGQIDSKFGFAPVGNIIMD 187 Query: 183 --AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGG 239 A L +++ G+ HIGSQI + E F A +++ + +R H I+ +D+GGG Sbjct: 188 AIKKALELENIELVGLHCHIGSQIFETEPFADAAEVMINFINNIRQETGHMIEELDLGGG 247 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL-------EPGRFLVADVGILVTKVIS 292 GI Y +P + +Y +I + K+ L EPGR +VA+ G + + S Sbjct: 248 FGIYYSEGDKPKETKEYCDIILNRVNEVCNKLSLKKPILTIEPGRSIVANAGTTLYTIGS 307 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK+ +D M D +RP LY+A +E +G+ + G CE+GD + Sbjct: 308 IKEIPGVRKYLAIDGGMTDNIRPALYEAKYEALIANKASGNIES-KVTVAGKCCESGDIL 366 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + GD+L + TGAYG S YN L + V + ++ R +++EL+ Sbjct: 367 LQDINLQEAESGDILAVLSTGAYGFSMSSGYNKNLRPAVVFVRNGEAKVVCKRQSYEELL 426 Query: 412 ELDS 415 + Sbjct: 427 INEI 430 >gi|239630911|ref|ZP_04673942.1| diaminopimelate decarboxylase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527194|gb|EEQ66195.1| diaminopimelate decarboxylase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 448 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 114/426 (26%), Positives = 172/426 (40%), Gaps = 12/426 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYA 58 M EG L V+ +LA QTP Y Y AI + F F+ D V YA Sbjct: 1 MDFATNHEGQLTIGGVAASQLARTFQTPLYVYDVGAIRQQIRAFKRVFEEADVSYAVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + A+ + G+ +D+VS GEL A AA P + F G K+ E+ AL +G Sbjct: 61 SKAFATIAMYEVAKSEGAHVDVVSGGELYTAQAADFPMAAVSFHGNNKSKAELTQALDAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL L+ + + + RV P I+A+TH TG+ + KFG + Sbjct: 121 VGTIIVDNFHELDLLDDLLGATVGQQDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASG 180 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHID 235 S A L + + G+ HIGSQI ++ F + L + + G + ++ Sbjct: 181 QSDEAAKRILADDHLNLLGIHAHIGSQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLN 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVT 288 VGGG GIAY P + Q I +EPGR +V G + Sbjct: 241 VGGGFGIAYTKQDDPLPPEAFVKAILATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLY 300 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V S K + + + H +VG CE+G Sbjct: 301 TVGSRKDVPGLRPYVAVDGGMGDNIRPALYQATYTAILADQPNAAPAEHVHLVGKYCESG 360 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + PGD++ + TGAYG + YN + V Q ++ R T Sbjct: 361 DILIDDAPLPTTTPGDVVVVFDTGAYGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDA 420 Query: 409 ELIELD 414 +LI+ D Sbjct: 421 DLIKND 426 >gi|301065233|ref|YP_003787256.1| diaminopimelate decarboxylase [Lactobacillus casei str. Zhang] gi|300437640|gb|ADK17406.1| Diaminopimelate decarboxylase [Lactobacillus casei str. Zhang] Length = 448 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 113/426 (26%), Positives = 172/426 (40%), Gaps = 12/426 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYA 58 M EG L V+ +LA QTP Y Y AI + F F+ D V YA Sbjct: 1 MDFATNHEGQLTIGGVAASQLARTFQTPLYVYDVGAIRQQIRAFKRVFEEADVSYAVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + A+ + G+ +D+VS GEL A AA P + F G K+ E+ AL +G Sbjct: 61 SKAFATIAMYEVAKSEGAHVDVVSGGELYTAQAADFPMAAVSFHGNNKSKAELTQALDAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL L+ + + + RV P I+A+TH TG+ + KFG + Sbjct: 121 VGTIIVDNFHELDLLDDLLGATVGQQDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASG 180 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHID 235 + A L + + G+ HIGSQI ++ F + L + + G + ++ Sbjct: 181 QADEAAKRILADDHLNLLGIHAHIGSQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLN 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVT 288 VGGG GIAY P + Q I +EPGR +V G + Sbjct: 241 VGGGFGIAYTKQDDPLPPEAFVKAILATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLY 300 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V S K + + + H +VG CE+G Sbjct: 301 TVGSRKDVPGLRPYVAVDGGMGDNIRPALYQATYTAILADQPNAAPAEHVHLVGKYCESG 360 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + PGD++ + TGAYG + YN + V Q ++ R T Sbjct: 361 DILIDDAPLPTTTPGDVVVVFDTGAYGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDA 420 Query: 409 ELIELD 414 +LI+ D Sbjct: 421 DLIKND 426 >gi|134045435|ref|YP_001096921.1| diaminopimelate decarboxylase [Methanococcus maripaludis C5] gi|132663060|gb|ABO34706.1| diaminopimelate decarboxylase [Methanococcus maripaludis C5] Length = 436 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 152/430 (35%), Positives = 225/430 (52%), Gaps = 16/430 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCY 57 +L + + +LA TP Y S T KN+ + +F G + ++ + Sbjct: 9 LTVEGKNLKIDGYNANELAKAYGTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISF 68 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A KAN+N AV K L+ LG G DIVS GEL A + VP+E+IVF+G K DEI + +++ Sbjct: 69 AYKANTNLAVTKLLSKLGCGADIVSAGELYIAKLSDVPSEKIVFNGNCKLKDEIKMGIEA 128 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH- 176 I FNV+S SEL +N+ A +GK A +AFRVNP+++A TH KISTG K++KFG+ I Sbjct: 129 EIRAFNVDSISELILINETAKEMGKVANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIES 188 Query: 177 -QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 A + VKI G+ HIGSQ+ I F + + + D L++ G I+ ++ Sbjct: 189 GIALETIKMAEKMDNVKIVGIHCHIGSQLTYISPFVEEARKIMDFVVLLKNEGIEIKDVN 248 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 +GGGLGI Y + + P D + + +ILEPGR LVA G+L+ V Sbjct: 249 LGGGLGIPYDKNTKIPVQEDLSKAILDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTV 308 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 +K + ++++D MND MRP +Y++YHEI I G +CE+ D Sbjct: 309 EHVKDTPVAKWIMIDAGMNDMMRPAIYESYHEIVPCTVRD---EKEVVSIAGGLCESSDV 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 +R+++ D + I GAYG + YNSR I+ N + +IR R T +L Sbjct: 366 FGKDRELSKMEIKDTVAILDVGAYGISMANNYNSRGKPAMILTNEKEVSLIRARETLADL 425 Query: 411 IELDSIPAWL 420 I D +P L Sbjct: 426 ISKDIVPNHL 435 >gi|297154267|gb|ADI03979.1| diaminopimelate decarboxylase [Streptomyces bingchenggensis BCW-1] Length = 448 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 120/420 (28%), Positives = 196/420 (46%), Gaps = 15/420 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 G L V L ++A TP Y + T+ +AF D + YA KA QA Sbjct: 31 RHGDLAVGGVPLAEIADRFGTPVYVLDEAEVRDRCRTYRDAFP--DAEILYAAKAFLCQA 88 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 ++ + G GLD+ S GEL A+ A P ERIV G K+ +++ AL+ G+ ++S Sbjct: 89 LVHWVDEEGLGLDVCSAGELELAVTAGFPPERIVLHGNAKSPRDLETALRLGVGRIVIDS 148 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 SE+ L G + + RV P I+A H+KI TG + KFG+ I ++ +A A Sbjct: 149 PSEIARLAAAVGPDGHQ-KVMVRVVPGISAGGHEKIRTGTDDQKFGLSISDGYAQHAIAR 207 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIA 243 L P ++++G+ H+GSQI ++ + A + + L + +G + +D+GGG GIA Sbjct: 208 ILDQPQLELTGLQCHLGSQITSVKPYLSAVRRMVGLMARLHEQHGLVLPELDLGGGHGIA 267 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y + A + ++ +EPGR +V G+ V +V+S+K + Sbjct: 268 YRPGEEALDLTTLARKVRMELVEACGAAGLTVPRLFIEPGRAVVGPAGVAVYRVLSVKHT 327 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + T+V +D M+D RP+LY + + +VG CE GD +A + Sbjct: 328 GEHTYVAIDGGMSDNPRPSLYGVRYTPRLVGRH-STAEPTRVTVVGRHCEAGDILATAVE 386 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + R GDLL + GAY + YN P V + ++ R +F+++ D Sbjct: 387 LPGDIRLGDLLAVPVAGAYHLSMASAYNMVGRPPVAAVRDGRARLLVRRESFEDIRRRDV 446 >gi|156741027|ref|YP_001431156.1| diaminopimelate decarboxylase [Roseiflexus castenholzii DSM 13941] gi|156232355|gb|ABU57138.1| diaminopimelate decarboxylase [Roseiflexus castenholzii DSM 13941] Length = 448 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 131/419 (31%), Positives = 191/419 (45%), Gaps = 12/419 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSNQ 65 G L ++ LA TP Y + I T+ A +T V YA KA N Sbjct: 25 GRLMIGGCNVATLARQYGTPLYLFDEETIRSACRTWRTALAACYRGETAVHYASKALLNT 84 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ +A G GLD+VS GEL AL A P +RI G KT E++ AL SGI V+ Sbjct: 85 ALTHLIADEGLGLDVVSGGELYVALRAGFPPQRIHMHGNAKTRAELEQALASGIGQIIVD 144 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + EL L PIA R+ PDI NTH I TG KFG+P+ + + Sbjct: 145 NLDELAMLANLTAYRSPPQPIALRIAPDIVTNTHAHIQTGHATSKFGLPLDALDAAAERL 204 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 T PG+ + G+ H+GSQ+ +E + L D +LR IQ I++GGG G+ Y Sbjct: 205 RTAPGLCLIGLHAHLGSQLFDLEPYAAEIDTLLDSASRLRDRHGFIIQQINIGGGAGVPY 264 Query: 245 HSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 +D P A + G +++EPGR ++A G+ + +I+ K Sbjct: 265 TADQHPFDVHALAMRLGEALTDECRRRGFPLLHLVIEPGRSIIARAGVALYTIIATKNLP 324 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 F+ +D M D +RP LY A + + A + I G CE+GD + + Sbjct: 325 HMRFLHIDGGMGDNIRPALYGARY-SAVLAERANAPIEESVAITGRYCESGDVLIHAAPL 383 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD+L + GAY + TYN +MVNG +I+ R T++++I D + Sbjct: 384 PRASVGDILAVPVAGAYTLSMASTYNLTPRPAVVMVNGGSVRLIQRRETYEDMIARDVV 442 >gi|312139160|ref|YP_004006496.1| diaminopimelate decarboxylase lysa [Rhodococcus equi 103S] gi|311888499|emb|CBH47811.1| diaminopimelate decarboxylase LysA [Rhodococcus equi 103S] Length = 473 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 112/428 (26%), Positives = 194/428 (45%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V + +LA TP + + AF G + V YA KA + + Sbjct: 46 DGVVRIAGVPVTELAEKYGTPLFVVDEDDFRSRCREMARAFGGAE-RVHYASKAFLSAEI 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G +D+ S GEL AL A PAERI G K++ E+D A+ +G+ ++S Sbjct: 105 ARWVRDEGLSMDVASGGELAVALHAGFPAERITMHGNNKSVAELDAAVAAGVGHIVLDSM 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E++ L++ A G + R+ + A+TH+ I+T ++ KFG + ++ A A Sbjct: 165 VEIERLDEVAARRGVVQDVLIRITVGVEAHTHEFIATAHEDQKFGFSLSGGKAMAAVARV 224 Query: 188 LPGVKISGV--DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-----HIDVGGGL 240 + V HIGSQI +++ F A + L +++ + +D+GGGL Sbjct: 225 FETGNLRLVGLHSHIGSQIFEVDGFELAAHRVIGLMREIVDRFGAEKTSQLSMVDLGGGL 284 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISI 293 GI+Y PP ++ A+ + +++EPGR + + + +V +I Sbjct: 285 GISYLPSDNPPPVAELAAKLAHIVATESAAAGLPVPTLMVEPGRAIAGPGTVTLYEVGTI 344 Query: 294 KKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 K + +V +D M+D +R +LY A ++ + D + A +VG CE+G Sbjct: 345 KDVTLDAGATRRYVSVDGGMSDNIRTSLYQAEYDARLVSR-DSDGAPVVARVVGKHCESG 403 Query: 349 DFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + + PGDLL + TGAY S YN + V +I R T Sbjct: 404 DIVIRDAWMPDDLGPGDLLAVAATGAYCYSMSSRYNLLTRPAVVAVRDGASRLILRRETV 463 Query: 408 QELIELDS 415 ++L+ L+ Sbjct: 464 EDLLSLEV 471 >gi|325673535|ref|ZP_08153226.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707] gi|325555556|gb|EGD25227.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707] Length = 473 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 112/428 (26%), Positives = 194/428 (45%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V + +LA TP + + AF G + V YA KA + + Sbjct: 46 DGVVRIAGVPVTELAEKYGTPLFVVDEDDFRSRCREMARAFGGAE-RVHYASKAFLSAEI 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G +D+ S GEL AL A PAERI G K++ E+D A+ +G+ ++S Sbjct: 105 ARWVRDEGLSMDVASGGELAVALHAGFPAERITMHGNNKSVAELDAAVAAGVGHIVLDSM 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E++ L++ A G + R+ + A+TH+ I+T ++ KFG + ++ A A Sbjct: 165 VEIERLDEVAARRGVVQDVLIRITVGVEAHTHEFIATAHEDQKFGFSLSGGKAMAAVARV 224 Query: 188 LPGVKISGV--DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-----HIDVGGGL 240 + V HIGSQI +++ F A + L +++ + +D+GGGL Sbjct: 225 FETGNLRLVGLHSHIGSQIFEVDGFELAAHRVIGLMREIVDRFGAEKTSQLSMVDLGGGL 284 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISI 293 GI+Y PP ++ A+ + +++EPGR + + + +V +I Sbjct: 285 GISYLPSDNPPPVAELAAKLAHIVATESAAAGLPVPTLMVEPGRAIAGPGTVTLYEVGTI 344 Query: 294 KKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 K + +V +D M+D +R +LY A ++ + D + A +VG CE+G Sbjct: 345 KDVTLDAGATRRYVSVDGGMSDNIRTSLYQAEYDARLVSR-DSDGAPVVARVVGKHCESG 403 Query: 349 DFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + + PGDLL + TGAY S YN + V +I R T Sbjct: 404 DIVIRDAWMPDDLGPGDLLAVAATGAYCYSMSSRYNLLTRPAVVAVRDGASRLILRRETV 463 Query: 408 QELIELDS 415 ++L+ L+ Sbjct: 464 EDLLSLEV 471 >gi|184155330|ref|YP_001843670.1| diaminopimelate decarboxylase [Lactobacillus fermentum IFO 3956] gi|227515201|ref|ZP_03945250.1| diaminopimelate decarboxylase [Lactobacillus fermentum ATCC 14931] gi|260662157|ref|ZP_05863053.1| diaminopimelate decarboxylase [Lactobacillus fermentum 28-3-CHN] gi|183226674|dbj|BAG27190.1| diaminopimelate decarboxylase [Lactobacillus fermentum IFO 3956] gi|227086533|gb|EEI21845.1| diaminopimelate decarboxylase [Lactobacillus fermentum ATCC 14931] gi|260553540|gb|EEX26432.1| diaminopimelate decarboxylase [Lactobacillus fermentum 28-3-CHN] gi|299783176|gb|ADJ41174.1| Diaminopimelate decarboxylase [Lactobacillus fermentum CECT 5716] Length = 439 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 124/423 (29%), Positives = 193/423 (45%), Gaps = 15/423 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 +G L V +LA QTP Y AI F F V YA KA S Sbjct: 13 QGHLTIGGVDSLELAAKYQTPLVVYDVAAIRHQIRAFKKVFAKNQVAAEVSYASKAFSAI 72 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A +D+VS GEL A+ A P E++ F G K+ +E++LA+Q+G+ ++ Sbjct: 73 AIYQVVAQEDGHIDVVSGGELTTAIKAHFPMEKVSFHGNNKSKEELELAVQNGVGMIIID 132 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + E+ L + A ++ R+ P I A+T++ I TG+ + KFG + + A Sbjct: 133 NFHEIDLLGEVLDEQDATATVSLRITPGIAAHTNEYIQTGQVDSKFGFDLESGQADRALE 192 Query: 186 STL--PGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 L P +K+ G+ HIGSQI ++ F A KL+ G + ++VGGG GI Sbjct: 193 EVLANPRLKVVGLHAHIGSQIFEVVGFEGVAKKLVDVAEHWHEEFGFQTRVLNVGGGFGI 252 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKK 295 Y + +P ++ I + I +EPGR +V G + V S K Sbjct: 253 RYVQEDQPLPPEEFVDAIIKAVKKEVAKKGLSMPAIWIEPGRSIVGPAGYSLYTVGSRKD 312 Query: 296 -SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + FV +D M D +RP LY A +E Y + I G CE+GD +A + Sbjct: 313 LPGYQPFVTVDGGMGDNIRPALYQAAYETVY-AKDPRQKPEETVRIAGKYCESGDILARD 371 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + + +PGDLL + TGAYG + YN + V ++ R ++ + LD Sbjct: 372 QALPKTKPGDLLVMLDTGAYGYAMASNYNRNPRPAVVFVENGHAQLVIQRESWADTCRLD 431 Query: 415 SIP 417 +P Sbjct: 432 -LP 433 >gi|116072467|ref|ZP_01469734.1| Diaminopimelate decarboxylase [Synechococcus sp. BL107] gi|116064989|gb|EAU70748.1| Diaminopimelate decarboxylase [Synechococcus sp. BL107] Length = 459 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 112/423 (26%), Positives = 187/423 (44%), Gaps = 13/423 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 + L + L LA TP Y + + +A ++ YA KANS+ Sbjct: 34 DDRLIVGDCLLSDLAQRYGTPLYVLDEQTLRSTCRAYRDALKRHYPGPSLPIYASKANSS 93 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + +A G GLD VS GEL AL +P +R+V G K+ +E+ LA + V Sbjct: 94 LVMSSLVASEGLGLDAVSAGELLTALRGGMPGDRMVLHGNNKSDEELLLAYNN-NVTVVV 152 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +++ +L L+ G + R P I +TH+ I TG + KFG Q+ + Sbjct: 153 DNQHDLDRLSALIPKDGNPVRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQVEPVLRG 212 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 +++G+ HIGSQI ++E ++ D + R GH ++ ++VGGGLGI Y Sbjct: 213 LIGQSWARLTGLHAHIGSQIFELEPHRDLAAVMADALKLARDLGHPVEDLNVGGGLGIRY 272 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVISIKKSA 297 PPS + ++ + +++ EPGR LVA G+ + V S K Sbjct: 273 VKSDDPPSIDRWVQVVAEAVIAACQARSLDLPRLMCEPGRSLVATAGVTLYTVGSRKTIP 332 Query: 298 DKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + +D M+D RP Y + + P + ++VG CE+GD + + Sbjct: 333 GIRTYVAIDGGMSDNPRPITYQSLYTCCVADRPLAEAD-ETVNLVGKHCESGDVLLKDLP 391 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + + GD++ + TGAY A S YN ++V+ +++ R +L+ D + Sbjct: 392 LPSTKSGDVIAVFATGAYNASMSSNYNRIPRPAAVLVHDGAAELVQKREQPDDLLRYDVL 451 Query: 417 PAW 419 P Sbjct: 452 PQR 454 >gi|72162824|ref|YP_290481.1| diaminopimelate decarboxylase [Thermobifida fusca YX] gi|71916556|gb|AAZ56458.1| diaminopimelate decarboxylase [Thermobifida fusca YX] Length = 461 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 118/420 (28%), Positives = 185/420 (44%), Gaps = 15/420 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V + +LA TP Y + AF+ D V YA KA +AV Sbjct: 44 DGEITIGGVGVTELARKFGTPLYVIDEADFRARARDYRLAFE--DADVYYAGKALLTKAV 101 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ + GEL ALAA P ERI G K+ E+ A++ G+ ++S Sbjct: 102 ARWVAEEGLKLDVCTGGELAVALAAGFPPERIGMHGNNKSAAELARAVEVGVGRIIIDSF 161 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYAYA 185 E+ L + A G+ + RV + A+TH+ ++T + KFG+ + Sbjct: 162 DEIDRLERIAAERGRVPEVLIRVTTGVEAHTHEFVATAHDDQKFGLSLSNGAAAEAVRRL 221 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGGGLGIAY 244 T P +++ G+ HIGSQI F A + L TQ +G ++ +D+GGGLGIAY Sbjct: 222 LTSPHLRLVGLHSHIGSQIFDTAGFEVAARRLSTFLTQIYAEHGISLPELDLGGGLGIAY 281 Query: 245 HSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 D P A +I +EPGR + GI + +V ++K Sbjct: 282 LPDDDPLDPKSIADSLRSIVEHECAAQNLPVPRIAVEPGRAIAGPAGITLYEVGTVKDVE 341 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +D M+D +R LY A + D + + +VG CE+GD + + Sbjct: 342 GIRTYVSVDGGMSDNIRTALYGAEYTCVLASRH-SDAEPMLSRLVGKHCESGDIVVRDLY 400 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + RPGDL+ + TGAY + YN + V ++ R T ++L+ LD Sbjct: 401 LPADLRPGDLVAVAATGAYCYSMASNYNHVPRPAVVAVREKNARVLVRRETEEDLLRLDV 460 >gi|307352865|ref|YP_003893916.1| diaminopimelate decarboxylase [Methanoplanus petrolearius DSM 11571] gi|307156098|gb|ADN35478.1| diaminopimelate decarboxylase [Methanoplanus petrolearius DSM 11571] Length = 431 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 148/426 (34%), Positives = 227/426 (53%), Gaps = 13/426 (3%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYAL 59 G L+ LA TP Y I +N+L +++A D + YA Sbjct: 5 DHLSIRNGHLYIGQHDTVDLAEQYGTPCYVSDEERIRQNFLRYNSALREYYNDVQLLYAA 64 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN N +V++ LA +G+G D+ S GEL AL A +P E+++F+G KT ++++LA+ G+ Sbjct: 65 KANGNLSVMRVLAKMGAGADVFSSGELHLALLAGMPPEKLLFNGSSKTTEDLELAVDKGV 124 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 +++S EL+ L++ A GK+ ++FR+NP + TH KI+TG KFGIP QI Sbjct: 125 R-VSLDSFDELRQLSEVAKRKGKEVEVSFRINPALEVPTHPKIATGLATSKFGIPAGQIL 183 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y A V G+ HIGSQI + F KA +++ DL ++ G + ID+GGG Sbjct: 184 DAYKAAMEADNVTPVGMHCHIGSQILDVAPFGKAAEVMVDLAGKITDLGVRLAFIDIGGG 243 Query: 240 L-GIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVIS 292 L + P+ +YA + F ++ ++ +EPGR+LV D IL+TKV S Sbjct: 244 LGIPYNRETDKMPTPEEYAKAVMPVFLKGIEKLGIKAQLWVEPGRYLVGDSTILLTKVNS 303 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 +K A K FV +D N +RP +YDAYHE+ N A + + GPICETGD +A Sbjct: 304 VK-KAHKNFVNVDAGFNLLIRPAMYDAYHEVVV-ANRADEAPVETYTVTGPICETGDILA 361 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 +RK+ + D++ + GAYG + YNSR E+MV G + +R R + ++I Sbjct: 362 ADRKLPVVADSDIMAVLDAGAYGYSMASQYNSRPRCMEVMVKGEKSAPMRRRESIIDIIN 421 Query: 413 -LDSIP 417 + +P Sbjct: 422 TMQKLP 427 >gi|332638809|ref|ZP_08417672.1| diaminopimelate decarboxylase [Weissella cibaria KACC 11862] Length = 428 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 120/419 (28%), Positives = 189/419 (45%), Gaps = 16/419 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQA 66 G L V +LA TP Y Y A+ + F F+ + V YA KA + A Sbjct: 11 GHLSIGGVDANELAQRFGTPLYAYDVGAMRQQMRDFKRVFEERHLNYAVSYASKAFATIA 70 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + A G +D+VS GE+ AL A P + F+G K+++E+ +A+++G+ V++ Sbjct: 71 MYEVAAQEGMHIDVVSGGEIYTALRAKFPMADVSFNGNNKSVEELTMAIENGLGTIIVDN 130 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHSLYAY 184 EL+ L++ + I R+ P + A+TH ISTG+ + KFG ++ Q + Sbjct: 131 FYELQVLHELLAERQQTQDILLRITPGVEAHTHDYISTGQTDSKFGFDVNSGQAEAALQQ 190 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 A P + + GV HIGSQI + F A L DL + Q I+ GGG GI Y Sbjct: 191 ALADPNLNVLGVHAHIGSQIFDVTGFQMAAAKLVDLVHEW---DFEPQVINAGGGFGIRY 247 Query: 245 HSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 +D P ++ + +G + +EPGR +V G + + S K Sbjct: 248 TADDEPLPAATFVEAIIDTIAEKAAAYGMQMPAVWIEPGRSIVGPAGYSLYTIGSRKDVP 307 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +D M D +RP LY A +E P + + G CE+GD + + Sbjct: 308 GIRSYLAVDGGMGDNIRPALYQAKYEAVLAAQPDAPSDEV-VRVAGKYCESGDVLVWEQA 366 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + +PGD+L + TGAYG + YN + V Q ++ R T +L+ LD Sbjct: 367 LPKTKPGDVLAVLATGAYGYSMASNYNRNGRPAVVFVENDQAKVVVERETLADLVRLDR 425 >gi|73667159|ref|YP_303175.1| diaminopimelate decarboxylase [Ehrlichia canis str. Jake] gi|72394300|gb|AAZ68577.1| diaminopimelate decarboxylase [Ehrlichia canis str. Jake] Length = 421 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 168/417 (40%), Positives = 251/417 (60%), Gaps = 5/417 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y L+ ENV++ +A + TP YCYS AI+ NY F ++++CYA+K+N Sbjct: 8 FFHYKNNILNIENVNVLDIAKDIGTPVYCYSLNAIKNNYRQFQENLP-NNSIICYAVKSN 66 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN +++ L LG+G D+VSEGE+RRA+A + +IVFSGVGKT EI AL + I F Sbjct: 67 SNLSILSLLNSLGAGADVVSEGEIRRAIAVGISPNKIVFSGVGKTEQEISFALDNRILQF 126 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL +N A AP++ R+NP+I+A+T+ KI+TG K +KFGIP + ++ Sbjct: 127 NVESIEELSLINTIACKKNIIAPVSIRINPNISADTNDKITTGLKVNKFGIPEELLDQIF 186 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 G++I G+ +HIGSQI + F ++ + + I +D+GGGLGI Sbjct: 187 NN--NFIGIRIIGISVHIGSQISNLNIFQNTIDKIKKIVKIFEQRNMQIIRVDLGGGLGI 244 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + P+ +YA+L+ + F N +II EPGR L+ + G+L+TKV+ K + +K+ + Sbjct: 245 PYKNADVFPTIPEYANLLKKNFENENYQIICEPGRALIGNTGVLLTKVLYHKHNQEKSHI 304 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 ILD MND +RP LY+A E I + DIVGPICE+ D A N I + Sbjct: 305 ILDAGMNDLIRPALYNA--EHTIIPAISTSTPLQLYDIVGPICESDDTFAYNYHINNLQN 362 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 G+++ I TGAYG+ S YNSR L+PE+MV+ S + IIR R T++++++ + I + Sbjct: 363 GEIVAICTTGAYGSSMSSNYNSRPLVPEVMVSNSNYDIIRHRQTYEDMLKDEVILDF 419 >gi|126696535|ref|YP_001091421.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9301] gi|126543578|gb|ABO17820.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9301] Length = 457 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 118/428 (27%), Positives = 200/428 (46%), Gaps = 12/428 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 +G L S+E+L +P Y + + + A + ++ YA KANS+ Sbjct: 31 DGKLSVGGCSIEELVKKYDSPLYILDEITLRNSCKAYKKALEKYYPGKSLPIYASKANSS 90 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + ++ G GLD VSEGEL A+ VP E+IVF G K+ E++ A V Sbjct: 91 IFMSSLVSSEGLGLDAVSEGELLTAIKGGVPNEKIVFHGNNKSDKELEFA-VRNNIKVIV 149 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +++ +L+ L++ + + I R P I +TH+ I TG + KFG I ++ L+ Sbjct: 150 DNDYDLERLDEISNAFNHDLEIMIRFTPGIECHTHEYIRTGSFDSKFGFGIEYLNILFNR 209 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 S +K+ G+ HIGSQI +++ +++ + + + GHN++ ++VGGGLGI Y Sbjct: 210 ISNTKHLKLKGLHAHIGSQIFELDPHKDLGEIMVKVILEAKKFGHNVEELNVGGGLGIRY 269 Query: 245 HSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 PPS ++ I + ++ EPGR +V+ GI + K+ + K+ Sbjct: 270 TESDDPPSIDEWVKTISSSVVEACKKNNLDFPTLMCEPGRSIVSTAGITIYKIGAFKEIP 329 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +D M+D RP Y + + + NP I G CE+GD + + Sbjct: 330 GIRTYLSVDGGMSDNPRPITYQSNYSACLVSNPFNINSKNKYTIAGKHCESGDVLFKEIE 389 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +A + GDL+ + TGAY S YN ++V + II+ R + +L++ D + Sbjct: 390 LAECKTGDLICVFGTGAYNNSMSSNYNRIPRPATLLVKDGEAEIIQKRESPLDLLKYDVL 449 Query: 417 PAWLQKTP 424 P K Sbjct: 450 PDRFIKQN 457 >gi|227903734|ref|ZP_04021539.1| diaminopimelate decarboxylase [Lactobacillus acidophilus ATCC 4796] gi|227868621|gb|EEJ76042.1| diaminopimelate decarboxylase [Lactobacillus acidophilus ATCC 4796] Length = 456 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 120/423 (28%), Positives = 197/423 (46%), Gaps = 15/423 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 +G L V +LA TP Y I F F+ G+ V YA KA + Sbjct: 33 EKGHLTIGGVDTLELAKKYGTPLVVYDVNRIRNQIRAFKKVFEEEGVSYAVSYASKAFAC 92 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + G+ D+VS GEL AL A PAE+I F G K++ EI++A+++ + + Sbjct: 93 IAMYQVANEEGAYTDVVSAGELYTALKAGFPAEKISFHGNNKSLAEIEMAVKNHVGKIII 152 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E++ L+Q + + R+ P I+A+TH+ TG+ + KFG + + A Sbjct: 153 DNFHEIELLDQVLHQYDTQINVMLRITPGISAHTHEYDQTGQIDSKFGFDLESGQADLAL 212 Query: 185 ASTLPGVKISG--VDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLG 241 L +++ + HIGSQI ++ F A K L ++ + R G+ + I+VGGG G Sbjct: 213 ERVLANSRMNMLGIHAHIGSQIFELNGFELAAKKLMEVAENWRSQYGYTAKIINVGGGFG 272 Query: 242 IAYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y +D P ++ I + +I +EPGR +V G + V S K Sbjct: 273 IKYTADDNPLKPEEFVRTIIETIKKGSADAAFPTPEIDIEPGRSIVGPAGYNLYTVGSCK 332 Query: 295 KSA-DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 +V +D M D +RP LY A +++ NP ++ I G CE+GD +A Sbjct: 333 TIPSYSPYVAVDGGMGDNIRPALYQAKYDVVLANNPKAPVVN-RVRIAGKYCESGDILAT 391 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + GD+L + TGAYG + YN + + H++ R + ++L+ L Sbjct: 392 E-SLPEVKSGDVLAMLDTGAYGYSMASNYNRNPRPAVVFAENRKAHLVVKRESLEDLVHL 450 Query: 414 DSI 416 D Sbjct: 451 DRF 453 >gi|58337158|ref|YP_193743.1| diaminopimelate decarboxylase [Lactobacillus acidophilus NCFM] gi|58254475|gb|AAV42712.1| diaminopimelate decarboxylase [Lactobacillus acidophilus NCFM] Length = 435 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 120/423 (28%), Positives = 197/423 (46%), Gaps = 15/423 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 +G L V +LA TP Y I F F+ G+ V YA KA + Sbjct: 12 EKGHLTIGGVDTLELAKKYGTPLVVYDVNRIRNQIRAFKKVFEEEGVSYAVSYASKAFAC 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + G+ D+VS GEL AL A PAE+I F G K++ EI++A+++ + + Sbjct: 72 IAMYQVANEEGAYTDVVSAGELYTALKAGFPAEKISFHGNNKSLAEIEMAVKNHVGKIII 131 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E++ L+Q + + R+ P I+A+TH+ TG+ + KFG + + A Sbjct: 132 DNFHEIELLDQVLHQYDTQINVMLRITPGISAHTHEYDQTGQIDSKFGFDLESGQADLAL 191 Query: 185 ASTLPGVKISG--VDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLG 241 L +++ + HIGSQI ++ F A K L ++ + R G+ + I+VGGG G Sbjct: 192 ERVLANSRMNMLGIHAHIGSQIFELNGFELAAKKLMEVAENWRSQYGYTAKIINVGGGFG 251 Query: 242 IAYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y +D P ++ I + +I +EPGR +V G + V S K Sbjct: 252 IKYTADDNPLKPEEFVRTIIETIKKGSADAAFPTPEIDIEPGRSIVGPAGYNLYTVGSCK 311 Query: 295 KSA-DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 +V +D M D +RP LY A +++ NP ++ I G CE+GD +A Sbjct: 312 TIPSYSPYVAVDGGMGDNIRPALYQAKYDVVLANNPKAPVVN-RVRIAGKYCESGDILAT 370 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + GD+L + TGAYG + YN + + H++ R + ++L+ L Sbjct: 371 E-SLPEVKSGDVLAMLDTGAYGYSMASNYNRNPRPAVVFAENRKAHLVVKRESLEDLVHL 429 Query: 414 DSI 416 D Sbjct: 430 DRF 432 >gi|113954614|ref|YP_730241.1| diaminopimelate decarboxylase [Synechococcus sp. CC9311] gi|113881965|gb|ABI46923.1| diaminopimelate decarboxylase [Synechococcus sp. CC9311] Length = 453 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 110/423 (26%), Positives = 181/423 (42%), Gaps = 11/423 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 G L L +LA TP Y I + + A D++ YA KA+S+ Sbjct: 29 GRLMVGGCRLSELAERYGTPLYVLDEVTIRASAQEYREALKRHYPGDSLAVYASKAHSSL 88 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ +A G GLD VS GEL AL +P ER+V G K+++E+ LA G+ + Sbjct: 89 ALTGLVASEGLGLDAVSAGELLTALDGGMPPERMVLHGNNKSVEELALAYSHGVM-VVAD 147 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 ++ +L L + G + R P I +TH+ I TG + KFG Q+ + Sbjct: 148 NQHDLDCLAELVPQGGGPVRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLQPVLTAL 207 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + ++ G+ HIGSQI +++ ++ D + R GH ++ ++VGGGLGI Y Sbjct: 208 AGCAWARVEGLHAHIGSQIFELDPHRDLAAVMADALKLARELGHPVRDLNVGGGLGIRYV 267 Query: 246 SDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSAD 298 PPS + ++ + + + EPGR LVA G+ V V + K Sbjct: 268 ESDDPPSIDAWVKVVAEAVTLACRERGLELPRLMCEPGRSLVASSGVTVYTVGARKVVPG 327 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + + + + + + G CE+GD + + Sbjct: 328 IRTYVSVDGGMSDNPRPITYQSLYTACLADRPLAQADETITLAGKHCESGDVLLKDLSFP 387 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 R G++L + TGAY S YN ++VN + +I+ R ++L+ D +P Sbjct: 388 SCRSGEVLVVLATGAYNLSMSSNYNRIPRPAAVLVNQGEAELIQRREQPEDLLRYDLMPD 447 Query: 419 WLQ 421 L+ Sbjct: 448 RLR 450 >gi|126179859|ref|YP_001047824.1| diaminopimelate decarboxylase [Methanoculleus marisnigri JR1] gi|125862653|gb|ABN57842.1| diaminopimelate decarboxylase [Methanoculleus marisnigri JR1] Length = 430 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 156/420 (37%), Positives = 219/420 (52%), Gaps = 12/420 (2%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYAL 59 S +G L LA TP Y I N+ S A V YA Sbjct: 5 SHLTVRDGHLRIGEHDTVDLAERFGTPLYVTDEMRIRGNFQRLSGALTAHYPKIRVLYAA 64 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN N A+ KTLA G+G D+ S GE+ ALAA + ++F+G KT ++ LA++ GI Sbjct: 65 KANGNLAIFKTLASQGAGADVFSAGEVALALAAGMLPSSLLFNGSSKTPADLALAVEKGI 124 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 +V+S EL+ L++ A + G IAFRVNP I TH KI+TG KFGIP QI Sbjct: 125 R-VSVDSPDELRQLDRAAGAAGTTVEIAFRVNPAIEVPTHPKIATGLATSKFGIPAGQIL 183 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y A L VK G+ HIGSQI +E F ++L D+ + L G N+ ID+GGG Sbjct: 184 DAYREALALEHVKPVGIHCHIGSQILDVEPFAHEVEVLIDVARDLLDIGVNLSFIDIGGG 243 Query: 240 LGIAYH-SDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVIS 292 LGI YH R P+ +YA + F ++ ++ +EPGR+L+ D +L+T+V S Sbjct: 244 LGIPYHRETDRAPTPEEYAEAVMPVFLRGIKELGIEPELWVEPGRWLIGDSTVLLTRVNS 303 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 +K +A KTF +D N +RPT+YD+YHE+ + + GPICETGD +A Sbjct: 304 VK-TAHKTFANVDAGFNLLVRPTMYDSYHEVVAANRADAPAVRE-YSVTGPICETGDILA 361 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 +R + GDL+ + GAYG S YNSR E+++ G + ++R T +L Sbjct: 362 KDRMLPELEAGDLIAVLDAGAYGFAMSSQYNSRPRCAEVLLAGEKAALMRRAETIDDLTA 421 >gi|57237365|ref|YP_178378.1| diaminopimelate decarboxylase [Campylobacter jejuni RM1221] gi|57166169|gb|AAW34948.1| diaminopimelate decarboxylase [Campylobacter jejuni RM1221] Length = 402 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 162/399 (40%), Positives = 234/399 (58%), Gaps = 3/399 (0%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + ++L TPFY Y+ I++ +L AF + + YA+KANSN ++++ LA+L Sbjct: 1 MDYKQLKQEFNTPFYIYNFDFIKECFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLD 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE++RAL A A +I+FSGVGKT +E+ AL+ I N+ESE+E+ L Sbjct: 61 SGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLES 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L KA I+ RVNP+++A TH ISTG E+KFG+ I +Y YA ++ G Sbjct: 121 VAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQ+ I H+A ++ L ++L++ +++ D+GGGLG+AY D D Sbjct: 181 VHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECESDLYD 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I +EPGR+LVA G V V+ K++ K FV++D AMND +RP+ Sbjct: 241 YAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPS 300 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AYHEI N A + D+VG ICE+GDF A R + + GD++ I+ TGAYG Sbjct: 301 LYEAYHEIILPYNQAQES---LCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYG 357 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S YN+R + E+ + Q +IR R F+ I L+ Sbjct: 358 FSMSSNYNTRNKVCELALEEGQVRLIRQRENFENQIALE 396 >gi|87303422|ref|ZP_01086210.1| diaminopimelate decarboxylase [Synechococcus sp. WH 5701] gi|87282070|gb|EAQ74032.1| diaminopimelate decarboxylase [Synechococcus sp. WH 5701] Length = 474 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 114/426 (26%), Positives = 187/426 (43%), Gaps = 13/426 (3%) Query: 8 EGS--LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKAN 62 +G L L +LA TP Y + + + A ++ YA KAN Sbjct: 47 DGHDRLQVGGCDLGELARRYGTPLYVLDEATLRASCRAYQEALAAHYPGPSLALYASKAN 106 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ + +A G GLD VS GEL AL +P ERIV G K+ +E+ LA+ G+ Sbjct: 107 SSLVLSALVASEGLGLDAVSAGELLTALQGGMPPERIVLHGNNKSDEELSLAVAHGVT-V 165 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V+++ +L+ L + A + G+ P+ R P I +TH+ I TG + KFG Q+ S+ Sbjct: 166 VVDNDHDLERLAEIAPAAGRVVPLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLESVL 225 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 + +++G+ HIGSQI +++ ++ D RS GH + ++VGGGLGI Sbjct: 226 QRLAGCSWARLTGLHAHIGSQIFELQPHRDLAGVMADALALARSLGHPVSDLNVGGGLGI 285 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKK 295 Y + PP+ ++ + + + + EPGR LVA G+ V + S K+ Sbjct: 286 RYVASDDPPTIQEWVKGVAEAVVRACRERDLELPRLLCEPGRSLVATAGLTVYTIGSRKQ 345 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + + + G CE+GD + + Sbjct: 346 IPGLRTYLSVDGGMSDNPRPITYQSSYTAVLAERPTAVATETVTVAGKHCESGDVLLKDL 405 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GDLL + TGAY A + YN ++V+G Q +++ R EL+ D Sbjct: 406 ALPPSSSGDLLVVFATGAYNASMASNYNRIPRPAAVLVHGGQAELVQRRERPDELLLHDV 465 Query: 416 IPAWLQ 421 +P + Sbjct: 466 LPERFR 471 >gi|45358763|ref|NP_988320.1| diaminopimelate decarboxylase [Methanococcus maripaludis S2] gi|45047629|emb|CAF30756.1| Diaminopimelate decarboxylase [Methanococcus maripaludis S2] Length = 436 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 153/426 (35%), Positives = 226/426 (53%), Gaps = 16/426 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYALKA 61 G+L + KLA TP Y S T KN+ + +F G + ++ +A KA Sbjct: 13 GGNLKIDGHDASKLASTYGTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYKA 72 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N+N AV + L+ LG G DIVS GEL A + VP+E+IVF+G K +EI + +++ I Sbjct: 73 NTNLAVTRLLSKLGCGADIVSAGELYIAKLSDVPSEKIVFNGNCKLKEEIKMGIEAEIRA 132 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIH 179 FNV+S SEL +N+ A +GK A +AFRVNP+++A TH KISTG K++KFG+ I Sbjct: 133 FNVDSISELVLINETAKEMGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESGIAL 192 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A + VKI G+ HIGSQ+ I F + + + D L++ G I+ +++GGG Sbjct: 193 ETIKMAEKMENVKIVGIHCHIGSQLTYISPFVEEARKIMDFVVLLKNEGIKIRDVNLGGG 252 Query: 240 LGIAYHSDHRPPSSSDYAS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 LGI Y + + P D + + +ILEPGR LVA G+L+ V +K Sbjct: 253 LGIPYDKNTKIPVQKDLSKAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVK 312 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 ++ +V++D MND MRP +Y++YHEI + G +CE+ D + Sbjct: 313 ETPVAKWVMIDAGMNDMMRPAIYESYHEITPCTIR---AEKEVVSVAGGLCESSDVFGKD 369 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R+I+ D + I GAYG + YNSR I+ N + +IR R T +LI D Sbjct: 370 REISKMEVKDTVAILDVGAYGISMANNYNSRGKPAMILTNEKEVSLIRARETLADLISKD 429 Query: 415 SIPAWL 420 +P L Sbjct: 430 IVPNHL 435 >gi|110800409|ref|YP_695029.1| diaminopimelate decarboxylase [Clostridium perfringens ATCC 13124] gi|168206713|ref|ZP_02632718.1| diaminopimelate decarboxylase [Clostridium perfringens E str. JGS1987] gi|168211701|ref|ZP_02637326.1| diaminopimelate decarboxylase [Clostridium perfringens B str. ATCC 3626] gi|168217954|ref|ZP_02643579.1| diaminopimelate decarboxylase [Clostridium perfringens NCTC 8239] gi|110675056|gb|ABG84043.1| diaminopimelate decarboxylase [Clostridium perfringens ATCC 13124] gi|170661848|gb|EDT14531.1| diaminopimelate decarboxylase [Clostridium perfringens E str. JGS1987] gi|170710345|gb|EDT22527.1| diaminopimelate decarboxylase [Clostridium perfringens B str. ATCC 3626] gi|182379999|gb|EDT77478.1| diaminopimelate decarboxylase [Clostridium perfringens NCTC 8239] Length = 431 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 123/427 (28%), Positives = 196/427 (45%), Gaps = 14/427 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALK 60 + K E L+ V L+ TP Y + N + NA V YA K Sbjct: 6 SMKVEENELYVGGVKASALSKEYGTPLYVIDEELVRSNCRRYYNAMKCEERGNRVTYAGK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A N ++ + LD+VS GEL A A P ERI F G K+ EIDL ++ GI Sbjct: 66 AFINMSMCNLVNEENLYLDVVSGGELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIG 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F V++ EL+ LN A G+ + R+ P + A+TH+ I TG+ + KFG P+ Sbjct: 126 RFIVDNIHELEVLNSIAQEYGRVQKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTV 185 Query: 181 LY--AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD-LTQQLRSNGHNIQHIDVG 237 A L ++++G+ HIGSQI +E F +++ + + + G+ I+ +D+G Sbjct: 186 YDAIKRAMELEYIELNGLHCHIGSQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLG 245 Query: 238 GGLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG GI Y +P +Y A I + + +EPGR +V + G+ + V Sbjct: 246 GGFGIYYTEGDKPKEIEEYCSVIINKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTV 305 Query: 291 ISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 +IK+ + +D M+D +RP LY A +E N D + G CE+GD Sbjct: 306 GAIKEIPNIRKYVSVDGGMSDNIRPALYSANYESLI-ANRVFDNSKEIVTVAGKCCESGD 364 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + ++ GD+L I TGAYG + YN + V+ ++ R T+++ Sbjct: 365 VLLNSIEMPRMETGDILAIMSTGAYGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYED 424 Query: 410 LIELDSI 416 L+ + Sbjct: 425 LLRNECF 431 >gi|254525643|ref|ZP_05137695.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9202] gi|221537067|gb|EEE39520.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9202] Length = 457 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 127/429 (29%), Positives = 205/429 (47%), Gaps = 12/429 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANS 63 +G L S+E+L +P Y + + K+ + A + +++ YA KANS Sbjct: 30 EDGKLSVGGCSIEELVKKYDSPLYILDESTLRKSCRAYKKALEKYFPGESLPIYASKANS 89 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 + + ++ G GLD VSEGEL AL VP E+IVF G K+ EID A++ Sbjct: 90 SIFMSNLVSSEGLGLDAVSEGELLTALKGGVPNEKIVFHGNNKSDKEIDFAIR-NNIKII 148 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 V+++ +LK L + + SL I R P I +TH+ I TG + KFG I +++L+A Sbjct: 149 VDNDYDLKRLEKISNSLNHDLEIMIRFTPGIECHTHEYIKTGSFDSKFGFGIEYLNNLFA 208 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 S + + G+ HIGSQI +++ +++ + + GHNI+ ++VGGGLGI Sbjct: 209 SISETKHLNLKGIHAHIGSQIFELDPHKDLGEIMVKVILDAKKFGHNIRELNVGGGLGIK 268 Query: 244 YHSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + PPS ++ I + ++ EPGR +V+ GI + K+ + K+ Sbjct: 269 YTQNDDPPSIDEWVKTISTSVVEACKKHNLDLPILMCEPGRSIVSTAGITIYKIGAFKEI 328 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M+D RP Y + + + NP I G CE+GD + + Sbjct: 329 PGIRTYLSVDGGMSDNPRPITYQSNYSACLVKNPFNINSKNKYTIAGKHCESGDVLFRDI 388 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++A + GDL+ + TGAY S YN I+V + II+ R +L+ D Sbjct: 389 ELANCKTGDLICVFGTGAYNNSMSSNYNRIPRPAAILVCDGEAEIIQKRERPFDLLRYDV 448 Query: 416 IPAWLQKTP 424 +P K Sbjct: 449 LPDRFIKQN 457 >gi|168214784|ref|ZP_02640409.1| diaminopimelate decarboxylase [Clostridium perfringens CPE str. F4969] gi|182625725|ref|ZP_02953493.1| diaminopimelate decarboxylase [Clostridium perfringens D str. JGS1721] gi|170713766|gb|EDT25948.1| diaminopimelate decarboxylase [Clostridium perfringens CPE str. F4969] gi|177908987|gb|EDT71469.1| diaminopimelate decarboxylase [Clostridium perfringens D str. JGS1721] Length = 431 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 122/427 (28%), Positives = 195/427 (45%), Gaps = 14/427 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALK 60 + K L+ V L+ TP Y + N + NA V YA K Sbjct: 6 SMKVEGNELYVGGVKASALSKEYGTPLYVIDEELVRSNCRRYYNAMKCEERGNRVTYAGK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A N ++ + LD+VS GEL A A P ERI F G K+ EIDL ++ GI Sbjct: 66 AFINMSMCNLVNEENLYLDVVSGGELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIG 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F V++ EL+ LN A G+ + R+ P + A+TH+ I TG+ + KFG P+ Sbjct: 126 RFIVDNIHELEVLNSIAQEYGRVQKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTV 185 Query: 181 LY--AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD-LTQQLRSNGHNIQHIDVG 237 A L ++++G+ HIGSQI +E F +++ + + + G+ I+ +D+G Sbjct: 186 YDAIKRAMELEYIELNGLHCHIGSQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLG 245 Query: 238 GGLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG GI Y +P +Y A I + + +EPGR +V + G+ + V Sbjct: 246 GGFGIYYTEGDKPKEIEEYCSVIINKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTV 305 Query: 291 ISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 +IK+ + +D M+D +RP LY A +E N D + G CE+GD Sbjct: 306 GAIKEIPNIRKYVSVDGGMSDNIRPALYSANYESLI-ANRVFDNSKEIVTVAGKCCESGD 364 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + ++ GD+L I TGAYG + YN + V+ ++ R T+++ Sbjct: 365 VLLNSIEMPRMETGDILAIMSTGAYGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYED 424 Query: 410 LIELDSI 416 L+ + Sbjct: 425 LLRNECF 431 >gi|262277926|ref|ZP_06055719.1| diaminopimelate decarboxylase [alpha proteobacterium HIMB114] gi|262225029|gb|EEY75488.1| diaminopimelate decarboxylase [alpha proteobacterium HIMB114] Length = 410 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 157/411 (38%), Positives = 231/411 (56%), Gaps = 1/411 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M K L N L+K+A +TPFY YS I+KN ++ + ++CYA+K Sbjct: 1 MDYLKTKNKKLFINNFDLKKIAKKHKTPFYIYSADQIKKNIKLVQSSLKKSNPLICYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN VI+ L G D+VS GEL+ AL A + ++IVFSGVGKT DEI A+Q GI Sbjct: 61 ANSNIQVIRELKKNNVGADVVSAGELKLALKAGISPKKIVFSGVGKTEDEIKFAIQKGIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 N ESESE+ ++N+ + L K I R+NPDI A T+KKI+TG K +KFG+ I Sbjct: 121 SINAESESEILSINKISKKLNKIVKIGIRINPDIKAKTNKKIATGTKVNKFGVSISDFFQ 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + L +KI + +HIGSQI I ++ K KL+ L +L H + ++D+GGG+ Sbjct: 181 ILNSKKNLKNIKIHLLSVHIGSQIKDIGAYKKVLKLISKLLLKLGKTNHEVDYVDLGGGM 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + + + +++ + KII E GRFL + GI+++KVI +KK+ +K Sbjct: 241 GIPYFKGDKNFDFKKFGKEVAKFYKKQKVKIIFEIGRFLTGNAGIIISKVIYVKKTREKY 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F+I+D MND R +Y+A+HEI I + VGPICE+ D + + ++ Sbjct: 301 FIIIDTGMNDMARSAIYEAFHEILPIEKNFKKFNKKI-EFVGPICESSDTFGIYKNYSIL 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + DL+ I GAYG S YN R LI EI+V+ + +R R + ++ Sbjct: 360 KEEDLVCITNCGAYGRTLSSNYNMRPLIEEIIVDKKKLKSVRKRQKIENIV 410 >gi|331268703|ref|YP_004395195.1| diaminopimelate decarboxylase [Clostridium botulinum BKT015925] gi|329125253|gb|AEB75198.1| diaminopimelate decarboxylase [Clostridium botulinum BKT015925] Length = 437 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 121/424 (28%), Positives = 192/424 (45%), Gaps = 14/424 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT--MVCYALKA 61 K L+ V + LA+ +TP Y I N + F V YA KA Sbjct: 12 MKIIHNELYVGGVKSKILANKYKTPLYVMDEELIRDNCRRYIKGFKAHQGINKVAYAGKA 71 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 A+ + + G LD+VS GEL A P E++ F G KT++EID+ ++ G+ Sbjct: 72 FLTLAMCQLIKEEGMCLDVVSGGELYTAYKGNFPMEKVYFHGNNKTLEEIDMGVKFGVGR 131 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIH 179 F ++ E++ +N+ A K I R+ P I A+TH I TG+ + KFG + +Q Sbjct: 132 FVADNFYEIENINKIAKKHNKIQKIILRITPGIEAHTHDYIKTGQIDSKFGFTLLQNQTL 191 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGG 238 A+ ++ G HIGSQI +IE + K++ L ++ G I+ +D+GG Sbjct: 192 KAVEMANDFSNIEFVGFHCHIGSQIFEIEPYKDEVKIMLSLIKEVNDKLGCKIKELDLGG 251 Query: 239 GLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 G GI Y P ++ A + + +++EPGR +V + G + + Sbjct: 252 GFGIYYGKGDCPKKIEEFCEAILQEADKVSKELDIEVPALVIEPGRSIVGNAGTTLYTIG 311 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 SIK+ + +D M D +RP LY A +E N + I G CE+GD Sbjct: 312 SIKEIPEIRKYVSVDGGMTDNIRPALYRANYECLVANNVNANS-KEKVTISGKCCESGDI 370 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + N K++ GD+L + TGAYG S YN + V + +I R ++ +L Sbjct: 371 LLENVKVSHAESGDILAVLSTGAYGYSMSSNYNKIPRSAVVFVKNGKSKLICKRQSYDDL 430 Query: 411 IELD 414 I + Sbjct: 431 IYGE 434 >gi|123968729|ref|YP_001009587.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. AS9601] gi|123198839|gb|ABM70480.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. AS9601] Length = 457 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 130/428 (30%), Positives = 206/428 (48%), Gaps = 12/428 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 +G L S+E+L +P Y T + + + A + +T+ YA KANS+ Sbjct: 31 DGKLSVGGCSIEELVKKYDSPLYILDETTLRMSCRAYKKALEKYYPGETLPIYASKANSS 90 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + ++ G GLD VSEGEL AL VP E+IVF G K+ EID A++ V Sbjct: 91 IFMSNLVSSEGLGLDAVSEGELLTALKGGVPNEKIVFHGNNKSDKEIDFAIK-NNIKIIV 149 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +++ +LK L + + SL I R P I +TH+ I TG + KFG I +++L+A Sbjct: 150 DNDYDLKRLEEVSNSLNHDLEIMIRFTPGIECHTHEYIRTGSFDSKFGFGIEYLNNLFAN 209 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 S +K+ G+ HIGSQI ++E +++ + + GHNI+ ++VGGGLGI Y Sbjct: 210 ISDTKHLKLRGIHAHIGSQIFELEPHKDLGEIMVKVILDAKKFGHNIKELNVGGGLGIKY 269 Query: 245 HSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + PPS ++ I + K++ EPGR +V+ GI + K+ + K+ Sbjct: 270 TKNDDPPSIDEWVKTISTSVVEACKKHNLDLPKLMCEPGRSIVSTAGITIYKIGAFKEIP 329 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +D M+D RP Y + + + NP I G CE+GD + + Sbjct: 330 GIRTYLSVDGGMSDNPRPITYQSNYSACLVKNPLNINSKNKYTIAGKHCESGDVLLKEIE 389 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +A + GDL+ + TGAY S YN ++V + II+ R + +L+ D + Sbjct: 390 LANCKTGDLICVFGTGAYNVSMSSNYNRIPRPAALLVCDGEAEIIQKRESPFDLLRYDVL 449 Query: 417 PAWLQKTP 424 P K Sbjct: 450 PDRFIKQN 457 >gi|315038094|ref|YP_004031662.1| diaminopimelate decarboxylase [Lactobacillus amylovorus GRL 1112] gi|325956547|ref|YP_004291959.1| diaminopimelate decarboxylase [Lactobacillus acidophilus 30SC] gi|312276227|gb|ADQ58867.1| diaminopimelate decarboxylase [Lactobacillus amylovorus GRL 1112] gi|325333112|gb|ADZ07020.1| diaminopimelate decarboxylase [Lactobacillus acidophilus 30SC] Length = 436 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 189/422 (44%), Gaps = 14/422 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSN 64 +G L V +LA TP Y I F F+ V YA KA + Sbjct: 12 EKGHLTIGGVDTVELAQKYGTPLVVYDVEQIRNQIRAFKKVFEKEKVAYAVSYASKAFAC 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + G+ +D+VS GEL AL A P ERI F G K++ EI++A+++ + + Sbjct: 72 IAMYQVANEEGAYIDVVSAGELYTALKANFPTERISFHGNNKSLFEIEMAVKNHVGKIII 131 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E+K L++ K + R+ P I+A+TH+ TG+ + KFG + + A Sbjct: 132 DNFHEIKLLDKVLREQDAKINVMLRITPGISAHTHEYDQTGQVDSKFGFDLESGQADLAL 191 Query: 185 ASTLPG--VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLG 241 L + + G+ HIGSQI ++ F A K L ++ + R G+ + I+VGGG G Sbjct: 192 EQVLANSRMNMVGIHAHIGSQIFELNGFEMAAKKLMEVAENWRSQYGYTAKVINVGGGFG 251 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL-------EPGRFLVADVGILVTKVISIK 294 I Y ++ P ++ I + + EPGR +V G + S K Sbjct: 252 IKYTAEDNPLKPEEFVQAIVETIKKEAKEAAFPVPEIDIEPGRSIVGPAGYNLYTTGSRK 311 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 +D M D +RP LY A +E +P L H I G CE+GD +A Sbjct: 312 VVPGYRPYVTVDGGMGDNIRPALYGAKYETVLATDPKA-PLTEHVRIAGKYCESGDILAE 370 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 ++ + + G LL + GAYG + YN + V + ++ R + ++L+ L Sbjct: 371 DQALPATKSGSLLAMLDAGAYGYSMASNYNRNPRPAVVFVENCKAKLVIKRESLEDLVHL 430 Query: 414 DS 415 D Sbjct: 431 DQ 432 >gi|268319541|ref|YP_003293197.1| hypothetical protein FI9785_1064 [Lactobacillus johnsonii FI9785] gi|262397916|emb|CAX66930.1| lysA [Lactobacillus johnsonii FI9785] Length = 434 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 111/420 (26%), Positives = 180/420 (42%), Gaps = 15/420 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L V KLA TP Y + I F F+ ++ +V YA KA ++ A Sbjct: 13 GHLTIGGVDSLKLAKEYGTPLVVYDVSQIRNQIRAFKKVFEEEQVNYVVSYASKAFASIA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + G+ D+VS GEL A+ A P ERI F G K+ +E+++ +++ + +++ Sbjct: 73 MYQVANEEGAYTDVVSAGELYTAMKANFPMERISFHGNNKSKEELEMGVKNHVGKIIIDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ L Q K + R+ P I+A+TH+ TG+ + KFG + + A Sbjct: 133 FYEIDLLRQVLEEQDSKINVMLRITPGISAHTHEYDQTGQVDSKFGFDLKSGQADKALQE 192 Query: 187 TLPGVKISG--VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 L ++ + HIGSQI ++ F A L D+ + I GG Sbjct: 193 VLKNKRMHMLGIHAHIGSQIFELNGFEMAAAKLVDVAASWKEKYDYTAQIINVGGGFGIK 252 Query: 245 HSDHRPPSSSD--------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 + P + +I +EPGR +V G + KV S+K+ Sbjct: 253 YVQEDHPLKPEEFVKAIVKAIKDEATKHNFPIPEIDIEPGRSIVGPAGYNLYKVGSMKEI 312 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +V +D M D +RP LY A +E N R + G CE+GD +A + Sbjct: 313 PGLVPYVAVDGGMGDNIRPALYQAKYETVL-ANNPQRRASQEFHVAGKYCESGDILA-DA 370 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 K+ + GD+L + TGAYG + YN + + ++ R + ++LI LD Sbjct: 371 KLPSLKAGDILAMLDTGAYGYSMASNYNRNPRPAVVFAENGKAQVVIKRESLEDLIHLDQ 430 >gi|331702338|ref|YP_004399297.1| diaminopimelate decarboxylase [Lactobacillus buchneri NRRL B-30929] gi|329129681|gb|AEB74234.1| diaminopimelate decarboxylase [Lactobacillus buchneri NRRL B-30929] Length = 435 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 115/419 (27%), Positives = 185/419 (44%), Gaps = 14/419 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V L +TP Y +I F F +G+D V YA KA + A Sbjct: 14 GHLEIGGVDSLDLVKQYKTPLVVYDVKSIRDQIHHFQKVFQDNGVDFAVSYASKAFACIA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + +D+VS GEL A+ A P ER+ F G K+ +E+++A++ I +++ Sbjct: 74 MFQLINQEKGHIDVVSGGELYTAIKAGFPMERVSFHGNDKSREELEMAVEHQIGVIILDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ L + + RV P ++A+TH+ TG+ + KFG I + A Sbjct: 134 FHEIDLLKEVLEDKQSHINVMLRVTPGVSAHTHEYDQTGQVDSKFGFDIQSGQARKALGL 193 Query: 187 TLPGVKISG--VDMHIGSQIDQIESFHKA-FKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L +++ + HIGSQI ++ F A KL+ L + G+ + ++VGGG GI Sbjct: 194 VLEDERMNMLGIHCHIGSQIFEVNGFEMAAVKLIDTLADWNKEIGYVAKVVNVGGGFGIK 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P + + I + + +EPGR + G + V S K Sbjct: 254 YTEDDDPIAPEMFVDAIVKAIKKRTEEVNLPMPAVWIEPGRSIAGPAGYNLYTVGSRKDV 313 Query: 297 ADKT-FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +V +D M D +RP LY A +E + I G CE+GD + + Sbjct: 314 PGIRSYVTVDGGMGDNIRPALYQAKYEAVL-AKDPSAPIKETVRIAGKYCESGDILIQKQ 372 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + +PGD+L + TGAYG + YN + V + + R TF++L+ LD Sbjct: 373 DLPATQPGDVLAMLDTGAYGYAMASNYNRNPRPAVVFVENGKSQVAIRRETFEDLVALD 431 >gi|294618664|ref|ZP_06698199.1| diaminopimelate decarboxylase [Enterococcus faecium E1679] gi|314939328|ref|ZP_07846574.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133a04] gi|314941268|ref|ZP_07848162.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133C] gi|314950672|ref|ZP_07853750.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133A] gi|314992037|ref|ZP_07857488.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133B] gi|314998019|ref|ZP_07862912.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133a01] gi|291595093|gb|EFF26435.1| diaminopimelate decarboxylase [Enterococcus faecium E1679] gi|313587978|gb|EFR66823.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133a01] gi|313593358|gb|EFR72203.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133B] gi|313597094|gb|EFR75939.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133A] gi|313599869|gb|EFR78712.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133C] gi|313641419|gb|EFS05999.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133a04] Length = 419 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 102/413 (24%), Positives = 168/413 (40%), Gaps = 8/413 (1%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAV 67 L V+ LA +TP Y Y + + L+F F DT V YA KA + Sbjct: 3 ELIIGGVTASTLAEKYKTPLYVYDEEKMRQTMLSFKRGFVSKRFDTKVLYASKAFQTIEM 62 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G GLD+VS GE+ AL A P + I F G KT +E+ AL++ + ++ Sbjct: 63 LHLVREYGFGLDVVSGGEIYTALQADFPRDTIYFHGNNKTPEELIYALENDLLHIVADNL 122 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E++ L + + KK I R+N + A+TH+ I T + KFG+ A Sbjct: 123 MEVELLAELSQRYLKKICIMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLI 182 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 + H + ++ + + ++ G G+ + Sbjct: 183 KERSYLELEGFHAHIGSQIFDVTAWLAEIDKLTNYLTDFDQPLSLNLGGGFGIRYTQNDQ 242 Query: 248 HRPPSS-----SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 P +Y + ++++EPGR +V + G + + IKK+ K + Sbjct: 243 PIPVEEALKKLIEYTEEALEKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYY 302 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +D M D +RP LY A ++ + + I G +CE+GD + + Sbjct: 303 FVDGGMTDNIRPALYQAEYDCDLAAK-LSEEKTEKVTIAGKMCESGDVVIKEAYLPKAES 361 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GDLL + TGAYG S YN + VN Q +I R F +L+ + Sbjct: 362 GDLLAVYSTGAYGYSMSSNYNRATRPAVVFVNNGQSRLIVRRQAFSDLLRGEV 414 >gi|69244870|ref|ZP_00603094.1| Diaminopimelate decarboxylase [Enterococcus faecium DO] gi|257879077|ref|ZP_05658730.1| diaminopimelate decarboxylase [Enterococcus faecium 1,230,933] gi|257882115|ref|ZP_05661768.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,502] gi|257889908|ref|ZP_05669561.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,410] gi|258615457|ref|ZP_05713227.1| diaminopimelate decarboxylase [Enterococcus faecium DO] gi|260562743|ref|ZP_05833238.1| diaminopimelate decarboxylase [Enterococcus faecium C68] gi|293556549|ref|ZP_06675119.1| diaminopimelate decarboxylase [Enterococcus faecium E1039] gi|293563574|ref|ZP_06678022.1| diaminopimelate decarboxylase [Enterococcus faecium E1162] gi|293567982|ref|ZP_06679321.1| diaminopimelate decarboxylase [Enterococcus faecium E1071] gi|294622605|ref|ZP_06701602.1| diaminopimelate decarboxylase [Enterococcus faecium U0317] gi|314947848|ref|ZP_07851255.1| diaminopimelate decarboxylase [Enterococcus faecium TX0082] gi|68196224|gb|EAN10654.1| Diaminopimelate decarboxylase [Enterococcus faecium DO] gi|257813305|gb|EEV42063.1| diaminopimelate decarboxylase [Enterococcus faecium 1,230,933] gi|257817773|gb|EEV45101.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,502] gi|257826268|gb|EEV52894.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,410] gi|260072902|gb|EEW61262.1| diaminopimelate decarboxylase [Enterococcus faecium C68] gi|291589305|gb|EFF21114.1| diaminopimelate decarboxylase [Enterococcus faecium E1071] gi|291597910|gb|EFF29035.1| diaminopimelate decarboxylase [Enterococcus faecium U0317] gi|291601294|gb|EFF31576.1| diaminopimelate decarboxylase [Enterococcus faecium E1039] gi|291604576|gb|EFF34062.1| diaminopimelate decarboxylase [Enterococcus faecium E1162] gi|313645828|gb|EFS10408.1| diaminopimelate decarboxylase [Enterococcus faecium TX0082] Length = 419 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 106/413 (25%), Positives = 169/413 (40%), Gaps = 8/413 (1%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAV 67 L V+ LA +TP Y Y + + L+F F DT V YA KA + Sbjct: 3 ELIIGGVTASTLAEKYKTPLYVYDEEKMRQTMLSFKRGFVSKRFDTKVLYASKAFQTIEM 62 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G GLD+VS GE+ AL A P + I F G KT +E+ AL++ + ++ Sbjct: 63 LHLVREYGFGLDVVSGGEIYTALQADFPRDTIYFHGNNKTPEELIYALENDLLHIVADNL 122 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY--A 185 E++ L + + KK I R+N + A+TH+ I T + KFG+ A Sbjct: 123 MEVELLAELSQRYLKKICIMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLI 182 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 +++ G HIGSQI + ++ L + G Sbjct: 183 KESSYLELEGFHAHIGSQIFDVTAWLAEIDKLTNYLTDFDQPLSLNLGGGFGIRYTQNDQ 242 Query: 246 SDHRPPSSSDYASLIHQY---FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 + + ++++EPGR +V + G + + IKK+ K + Sbjct: 243 PIPVEEALKKLIEYTEEALEKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYY 302 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +D M D +RP LY A ++ + + I G +CE+GD + + Sbjct: 303 FVDGGMTDNIRPALYQAEYDCDLAAK-LSEEKTEKVTIAGKMCESGDVVIKEAYLPKAES 361 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GDLL + TGAYG S YN + VN Q +I R F +L+ + Sbjct: 362 GDLLAVYSTGAYGYSMSSNYNRATRPAVVFVNNGQSRLIVRRQAFSDLLRGEV 414 >gi|227889926|ref|ZP_04007731.1| diaminopimelate decarboxylase [Lactobacillus johnsonii ATCC 33200] gi|227849370|gb|EEJ59456.1| diaminopimelate decarboxylase [Lactobacillus johnsonii ATCC 33200] Length = 434 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 115/420 (27%), Positives = 190/420 (45%), Gaps = 15/420 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L V KLA TP Y + I F F+ ++ V YA KA ++ A Sbjct: 13 GHLTIGGVDSLKLAKEYGTPLVVYDVSQIRNQIRAFKKVFEEEQLNYAVSYASKAFASIA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + G+ D+VS GEL A+ A P ER+ F G K+ +E+++A+++ + +++ Sbjct: 73 MYQVANEEGAYTDVVSAGELYTAMKANFPMERVSFHGNNKSKEELEMAVKNHVGKIMIDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ LNQ + + R+ I+A+TH+ TG+ + KFG + + A Sbjct: 133 FYEINLLNQVLEEQDSEINVMLRITLGISAHTHEYDQTGQVDSKFGFDLKSGQADKALQE 192 Query: 187 TLPGVKISG--VDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIA 243 L ++ + HIGSQI ++ F A L D+ R + + Q I+VGGG GI Sbjct: 193 VLKNQRMHMLGIHAHIGSQIFELNGFEMAAAKLVDVAASWRKNYDYTAQVINVGGGFGIK 252 Query: 244 YHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P ++ +I +EPGR +V G + KV S+K+ Sbjct: 253 YVQEDHPLKPEEFVKAIVKTIKDEATKHNFPLPEIDIEPGRSIVGPAGYNLYKVGSMKEI 312 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +V +D M D +RP LY A +E N + + G CE+GD +A + Sbjct: 313 PGLVPYVAVDGGMGDNIRPALYQAKYETVL-ANDPQRKASQEFHVAGKYCESGDILA-DA 370 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 K+ + GD+L + TGAYG + YN + + ++ R + ++L+ LD Sbjct: 371 KLPSLKAGDILAMLDTGAYGYSMASNYNRNPRPAVVFAEDGKAQVVIRRESLEDLVHLDQ 430 >gi|18309577|ref|NP_561511.1| diaminopimelate decarboxylase [Clostridium perfringens str. 13] gi|18144254|dbj|BAB80301.1| diaminopimelate decarboxylase [Clostridium perfringens str. 13] Length = 466 Score = 257 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 123/427 (28%), Positives = 197/427 (46%), Gaps = 14/427 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALK 60 + K E L+ V L+ TP Y + N + NA + V YA K Sbjct: 41 SMKVEENELYVGGVKASALSKEYGTPLYVIDEELVRSNCRRYYNAMKCEEIGNRVTYAGK 100 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A N ++ + LD+VS GEL A A P ERI F G K+ EIDL ++ GI Sbjct: 101 AFINMSMCNLVNEENLYLDVVSGGELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIG 160 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F V++ EL+ LN A G+ + R+ P + A+TH+ I TG+ + KFG P+ Sbjct: 161 RFIVDNIHELEVLNSIAQEYGRVQKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTV 220 Query: 181 LY--AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD-LTQQLRSNGHNIQHIDVG 237 A L ++++G+ HIGSQI +E F +++ + + + G+ I+ +D+G Sbjct: 221 YDAIKRAMELEYIELNGLHCHIGSQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLG 280 Query: 238 GGLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG GI Y +P +Y A I + + +EPGR +V + G+ + V Sbjct: 281 GGFGIYYTEGDKPKEIEEYCSVIINKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTV 340 Query: 291 ISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 +IK+ + +D M+D +RP LY A +E N D + G CE+GD Sbjct: 341 GAIKEIPNIRKYVSVDGGMSDNIRPALYSANYESLI-ANRVFDNSKEIVTVAGKCCESGD 399 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + ++ GD+L I TGAYG + YN + V+ ++ R T+++ Sbjct: 400 VLLNSIEMPRMETGDILAIMSTGAYGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYED 459 Query: 410 LIELDSI 416 L+ + Sbjct: 460 LLRNECF 466 >gi|164688315|ref|ZP_02212343.1| hypothetical protein CLOBAR_01960 [Clostridium bartlettii DSM 16795] gi|164602728|gb|EDQ96193.1| hypothetical protein CLOBAR_01960 [Clostridium bartlettii DSM 16795] Length = 432 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 121/426 (28%), Positives = 203/426 (47%), Gaps = 14/426 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 + + LH V+ L +TP Y + I + +F V YA KA Sbjct: 7 MEIKDNVLHIGGVNTLDLVKKYKTPLYVFDEELIRSKCREYIKSFKVKENGNKVAYAGKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + + K + G LD+VS GEL A A +P E I+F G KT+DE+ L ++ G+ Sbjct: 67 FLTKYMCKLVCEEGLCLDVVSGGELYTAYKAGMPMENILFHGNNKTVDEVKLGIELGVGR 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F V++ EL + + + K I FRV P I+A+THK I TG+ + KFG + Sbjct: 127 FVVDNFYELDLIEKFCLENNKTQKIYFRVTPGIDAHTHKYIRTGQIDSKFGFALINGDFY 186 Query: 182 YA--YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ--LRSNGHNIQHIDVG 237 A +++ G+ HIGSQI +I+ F +++ L ++ ++ N+ +D+G Sbjct: 187 KAVEKVKQYKNIELVGIHAHIGSQIFEIKPFLDEVEIMLKLLKEVNENNDDINLTEVDLG 246 Query: 238 GGLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG+G+ Y + +P + S++ A + + + +++EPGR LVA+ G + V Sbjct: 247 GGIGVYYTEEDKPKTISEFCEAIINKADEVCEELNIKRPTLLIEPGRSLVANAGSTIYTV 306 Query: 291 ISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 SIK+ + +D M D +RP+LY A +E + + I G CE+GD Sbjct: 307 GSIKEIKNVRTYVSVDGGMTDNIRPSLYQADYECGIVNKINKTGHNHKVTIAGKCCESGD 366 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + +I GD+L TGAYG + YN P + V + + R ++++ Sbjct: 367 ILISDTEIGDINSGDILITTTTGAYGYSMASNYNKIPKNPVVFVQNGEDKLACKRQSYED 426 Query: 410 LIELDS 415 L+ L+ Sbjct: 427 LLALEV 432 >gi|297202382|ref|ZP_06919779.1| diaminopimelate decarboxylase [Streptomyces sviceus ATCC 29083] gi|197710099|gb|EDY54133.1| diaminopimelate decarboxylase [Streptomyces sviceus ATCC 29083] Length = 463 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 124/420 (29%), Positives = 192/420 (45%), Gaps = 12/420 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 G + + ++ LA TP Y + AF G D V YA KA ++A Sbjct: 44 ENGVVTVGGIDVKTLAEEHGTPAYVVDEADFRARARAWRTAF-GHDADVFYAGKAFLSRA 102 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ L G LD+ S GEL AL+A +PA+RI F G K+ EI A++SG+ ++S Sbjct: 103 VVRWLHEEGLNLDVCSGGELATALSAGMPADRIAFHGNNKSTQEITRAVESGVGRIVLDS 162 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAY 184 E+ + A SLGK+ + R+ + A+TH+ I+T ++ KFGIP+ Sbjct: 163 FQEIVRVAHIAQSLGKRQRVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRR 222 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A L G+++ G+ HIGSQI + F A + L + +R + ID+GGGLGIA Sbjct: 223 ALKLDGIELIGIHSHIGSQIFDMSGFEVAAHRVVGLLKDVRDEHGVELPEIDLGGGLGIA 282 Query: 244 YHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y SD P + A + +I +EPGR +V + +V +IK Sbjct: 283 YTSDDDPREPHEIAKALTEIVTRECEAARLRTPRISVEPGRAIVGPTAFTLYEVGTIKPL 342 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + T +V+ D + A +VG CE+GD + + Sbjct: 343 DGLRTYVSVDGGMSDNIRTALYDAEYTVALVSRTSDAEPMLARVVGKHCESGDIVVKDAF 402 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + PGDL+ + TGAY + YN L P + V+ + +I R T ++L+ LD Sbjct: 403 LPADLAPGDLIAVPATGAYCRSMASNYNHVLRPPVVAVHDGESRVIVRRETEEDLLRLDV 462 >gi|33865470|ref|NP_897029.1| diaminopimelate decarboxylase [Synechococcus sp. WH 8102] gi|33632639|emb|CAE07451.1| diaminopimelate decarboxylase [Synechococcus sp. WH 8102] Length = 459 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 116/427 (27%), Positives = 183/427 (42%), Gaps = 13/427 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 L L LA TP Y + + +A ++ YA KANS+ Sbjct: 35 DRLMVGGCLLSDLAQRYGTPLYVLDEDTVRGTCRAYRDALKQHYPGPSLPIYASKANSSL 94 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 V A G GLD VS GEL A +P ER+V G K +E+ L + V+ Sbjct: 95 LVSSIAASEGLGLDAVSAGELLTAFQGGMPGERMVLHGNNKNDEEL-LLAYNNDVTIVVD 153 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 ++ +L+ L + + G A + R P I +TH+ I TG + KFG + S+ Sbjct: 154 NQHDLERLAELVPAGGAPARLMLRFTPGIECHTHEYIQTGHLDSKFGFDPDLLESVLRQL 213 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 P K++G+ HIGSQI ++E ++ D + RS GH ++ ++VGGGLGI Y Sbjct: 214 VGKPWAKLTGLHAHIGSQIFELEPHRDLAAVMADALKLARSLGHPVEDLNVGGGLGIRYV 273 Query: 246 SDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSAD 298 + PP+ + ++ + EPGR LVA G+ + V S K Sbjct: 274 ASDDPPTIEQWVKVVADAVTAACRDRQLELPRLLCEPGRSLVATAGVTLYAVGSRKTIPG 333 Query: 299 KTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + +D M+D RP Y + + P ++VG CE+GD + + + Sbjct: 334 VRTYVAIDGGMSDNPRPITYQSLYTCCLADRPLAPAE-ETVNLVGKHCESGDVLLKDLPL 392 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 + GD++ + TGAY A S YN ++V + + R +L+ D +P Sbjct: 393 PTTQSGDIVAVFATGAYNASMSSNYNRIPRPAAVVVQSGSSELFQKREQPDDLLRYDVLP 452 Query: 418 AWLQKTP 424 + P Sbjct: 453 ERFRALP 459 >gi|319778683|ref|YP_004129596.1| Diaminopimelate decarboxylase [Taylorella equigenitalis MCE9] gi|317108707|gb|ADU91453.1| Diaminopimelate decarboxylase [Taylorella equigenitalis MCE9] Length = 428 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 173/414 (41%), Positives = 258/414 (62%), Gaps = 8/414 (1%) Query: 6 YFEGSLHAENVSLEKLAHVVQT--PFYCYSTTAIEKNYLTFSNAF-DGMDTMVCYALKAN 62 Y L+ E++S++++ + + T PF YS AIE + + N ++++CYA+KAN Sbjct: 13 YKNDKLYIESLSVKEIQNRLSTESPFVLYSKKAIESAWDGYKNILGKYPNSLICYAVKAN 72 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN +++K LG+G DIVS GEL+R L +I+FSGVGK EI LAL+SGI CF Sbjct: 73 SNLSLLKLFVSLGAGFDIVSGGELKRCLEVGADTNKIIFSGVGKQSWEIKLALESGIKCF 132 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE EL+ + A LG KA I+ RVNPDI+A TH ISTG KE+KFGI + +Y Sbjct: 133 NVESEFELENIATIARELGLKARISLRVNPDIDARTHPYISTGLKENKFGIDFSRALDVY 192 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 YA+++ ++I G+D HIGSQI +IE + A + +L +Q+RS+G + H+D+GGG+GI Sbjct: 193 LYAASIDALEIVGIDCHIGSQILEIEPYLDAADRVIELIRQIRSHGIYLSHLDIGGGVGI 252 Query: 243 AYHSDHRPPSSSDYASLIHQYFGN--LQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y +++ AS+ + +I+EPGR LV + ILV +V+ IKK+ K Sbjct: 253 RYSNENPIDIVCLRASIDAKLRSAGLEHMLVIMEPGRSLVGNSAILVAQVLGIKKTDYKN 312 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I++ MND +RP+LY+AYH + + G+ DIVGPICETGD++A +RK+ + Sbjct: 313 FAIINAGMNDLIRPSLYEAYHGVLPVQIRKGEA--TKYDIVGPICETGDWLAKDRKL-VL 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GDL+ IE GAYG + YNSR + E +V+ ++ +IR +++ L+ Sbjct: 370 QAGDLIVIESVGAYGTSMASNYNSRPFLAEYLVDDAELCMIRKAQGLEDIWRLE 423 >gi|152974944|ref|YP_001374461.1| diaminopimelate decarboxylase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023696|gb|ABS21466.1| diaminopimelate decarboxylase [Bacillus cytotoxicus NVH 391-98] Length = 438 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 174/422 (41%), Gaps = 12/422 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSN 64 +G L +LA TP Y Y TAI +N F +AF V YA KA Sbjct: 11 EQGHLEIGGCDTTQLAKRYGTPLYVYDETAIRENCRAFHHAFQKSGFSYQVAYASKAFLC 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + + LD+VS GEL AL A PA RI F G KT +E+ +AL++ I CF V Sbjct: 71 MEMCRVALEENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTEEEMRMALEANIGCFVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI--PIHQIHSLY 182 ++ EL+ L+ A K I RV P + A+TH+ I+TG+ + KFG Q Sbjct: 131 DNFFELEVLHDLAEQYKKMVNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQALHAM 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLG 241 A + G+ HIGSQI + F +A ++L + +++ + I ++VGGG G Sbjct: 191 ERALEKTNYNVLGIHSHIGSQIFETAGFIRAIEVLHHFLEGVKTKTGYTISVLNVGGGFG 250 Query: 242 IAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y P + Y +I +EPGR +V D G + V +IK Sbjct: 251 IRYTESDTPLTLEAYVQAVTDAVRERFTACEYPLPEIWIEPGRSIVGDAGTTIYTVGAIK 310 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + + N A I G CE+GD + + Sbjct: 311 NIPGIRKYVSVDGGMTDNLRPALYGARYEAMLANRANVANEEVVSIAGKCCESGDMLIWD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + DLL + TGAYG + YN + ++ R +++ +I D Sbjct: 371 VYLPQVVSSDLLAVSCTGAYGYSMANNYNRIRRPAVVFAKDGTSQVVVERESYENIIGND 430 Query: 415 SI 416 I Sbjct: 431 RI 432 >gi|160901955|ref|YP_001567536.1| diaminopimelate decarboxylase [Petrotoga mobilis SJ95] gi|160359599|gb|ABX31213.1| diaminopimelate decarboxylase [Petrotoga mobilis SJ95] Length = 430 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 128/420 (30%), Positives = 195/420 (46%), Gaps = 11/420 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALKANS 63 +G L V LA+ TP I +N +AF D + + YA KA Sbjct: 5 KDGVLEISGVKSTHLANEYGTPLLVLDEAQIRENIKRLKSAFESADYTNYEIAYASKAFL 64 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N + + L LD+VS GEL A + PA +I F+G KT +E+ +AL++ + Sbjct: 65 NTELCRILQSENVSLDVVSGGELYIAFHSSFPANKIFFNGNSKTNEELVMALENDVGHII 124 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 V++E E + + + + L KKA I FRV P+I +THK ISTG+K+ KFG+ + L Sbjct: 125 VDNEDEFRNIERISKRLRKKAKIYFRVIPNITPDTHKYISTGQKDSKFGMSFDDMLKLIK 184 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 ++I G+ HIGSQI++ E + + K DL ++R + GG Sbjct: 185 SIKNSENLEIKGIHAHIGSQINEAEPYVELVKTFFDLLNKIREETGAVLPEIDIGGGFGV 244 Query: 244 YHSDHRPPSSSDYASLIHQY--------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 HS A F KII+EPGR++++ G + V +IK+ Sbjct: 245 AHSTFEKAIDIQEAIKGVIQEVRFLSSKFHYPSPKIIVEPGRYIISSAGTTLYTVGTIKR 304 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +K +V++D M D +RP LY A +E+ P I G CE+GD + Sbjct: 305 TENKKYVVVDGGMADNIRPALYGAKYEVFIANRPKDTINLEKVTIAGRACESGDILIEET 364 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + +PGDLL I TG Y S YN L ++V + +I R + +LI+ D Sbjct: 365 CLPEIKPGDLLAIPSTGDYTNSMSNNYNGFLKPAIVLVKNGKHKLITRREVYDDLIKRDI 424 >gi|227529334|ref|ZP_03959383.1| diaminopimelate decarboxylase [Lactobacillus vaginalis ATCC 49540] gi|227350762|gb|EEJ41053.1| diaminopimelate decarboxylase [Lactobacillus vaginalis ATCC 49540] Length = 443 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 120/420 (28%), Positives = 192/420 (45%), Gaps = 14/420 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQA 66 G L +LAH TP Y + I + +F FD +D V YA KA + A Sbjct: 21 GHLMIGGCDSIELAHEYGTPLVVYDVSQIRQQIRSFRRVFDANHVDYAVSYASKAFAAIA 80 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + A G+ +D+VS GEL A+ A P ER+ F G K+ +E+++A+ + +++ Sbjct: 81 MYQVAAAEGAHVDVVSAGELYTAIKADFPIERVSFHGNNKSREELEMAIDHHVGTIMIDN 140 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E++ L + + R+ P I+A+T+K I TG+ + KFG + + A Sbjct: 141 FHEIELLATVLEERNESVDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALQK 200 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 L P +K+ G+ HIGSQI ++ F K L ++ R + Q I+VGGG GI Sbjct: 201 VLANPRMKMRGLHAHIGSQIFELAGFEGVAKKLVEVAAHWRDEFGYEAQVINVGGGFGIR 260 Query: 244 YHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P ++ I + I +EPGR +V G + V S K Sbjct: 261 YVAADHPLKPEEFVDAIIKAIKKETAEKGLSMPAIWIEPGRSIVGPAGYNLYTVGSRKDV 320 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D +RP LY A +E NP + H + G CE+GD +A ++ Sbjct: 321 PGLKPYVTVDGGMGDNIRPALYQAEYETVLASNPQA-PIKEHVRLAGKYCESGDILAQDQ 379 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + +PGD+L + TGAYG + YN + + ++ R + +L+ LD Sbjct: 380 GLPETQPGDVLAMLDTGAYGYSMASNYNRNPRPAVVFAEDGKAQLVIERESLADLVHLDR 439 >gi|216391|dbj|BAA14211.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. amylosacchariticus] Length = 440 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 114/422 (27%), Positives = 176/422 (41%), Gaps = 16/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V LA TP Y Y I + +F AF G+ V YA KA S+ A Sbjct: 15 GHLEIGGVDALYLAEKYGTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVA 74 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I+ G LD+VS R L F + L + Sbjct: 75 MIQLAEEEGLSLDVVSGESYIRLLQQAFRQNASTFMETIRAGKNCGWRLSTASAALWWII 134 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--Y 184 + L G + R+ P + A+TH I+TG+++ KFG +H + A Sbjct: 135 SMKSSLLEDLCKETGHSIDVLLRITPRVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQ 194 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIA 243 +++ GV HIGSQI F A + + + R + +++GGG GI Sbjct: 195 VLQSEHIQLLGVHCHIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIR 254 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P +++Y I + +G +I +EPGR LV D G + V S K+ Sbjct: 255 YTEDDEPLHATEYVEKIIEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEV 314 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +D MND +RP LY A +E N G+ I G CE+GD + + Sbjct: 315 PGVRQYVAVDGGMNDNIRPALYQAKYEAAA-ANRIGEAHDKTVSIAGKCCESGDMLIWDI 373 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GDLL + AYG + YN + V + H++ R T++++++LD Sbjct: 374 DLPEVKEGDLLAVLYR-AYGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVKLD- 431 Query: 416 IP 417 +P Sbjct: 432 LP 433 >gi|68271066|gb|AAY89059.1| meso-diaminopimelate decarboxylase [Streptomyces clavuligerus] Length = 463 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 120/420 (28%), Positives = 191/420 (45%), Gaps = 12/420 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + + +LA TP Y ++ A G + V YA KA ++A Sbjct: 44 EDGVATVGGIDVTRLAEEFGTPGYILDEDDFRDRARAWATAL-GHEADVFYAGKAFLSRA 102 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ L G LD+ S GEL AL A +PA+RI F G K+++EI+ A+++G+ ++S Sbjct: 103 VVRWLHEEGLNLDVCSGGELLTALDAGMPADRIAFHGNNKSLEEIERAVRAGVGRIVLDS 162 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAY 184 E+ + A +LG + R+ + A+TH+ I+T ++ KFG+P+ Sbjct: 163 SQEIVRVAHVAQALGVRQRGLIRITVGVEAHTHEFIATAHEDQKFGLPLAGGQAAEGVRR 222 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A L G+++ G+ HIGSQI F A + L QQ+R + ID+GGGLGIA Sbjct: 223 ALGLDGLELIGLHSHIGSQIFDTSGFEVAAHRVVGLLQQVRDEHGVELPEIDLGGGLGIA 282 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y D P A +H+ ++ +EPGR +V + +V +IK Sbjct: 283 YTPDDDPREPRHIAKALHEIVTRECEDAKLRPPRMSVEPGRAIVGPTAFTLYEVGTIKPL 342 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + T +V+ A D + + +VG CE+GD + + Sbjct: 343 PGLRTYVSVDGGMSDNIRTALYDAEYSVALVSRASDAAAMLSRVVGKHCESGDIVVKDAF 402 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + PGDLL + TGAY + YN L P + V +I R T +E++ LD Sbjct: 403 LPRDLAPGDLLAVPATGAYCRSMARNYNHALRPPVVAVRDGAARVIVRRETEEEILRLDV 462 >gi|225019949|ref|ZP_03709141.1| hypothetical protein CLOSTMETH_03903 [Clostridium methylpentosum DSM 5476] gi|224947313|gb|EEG28522.1| hypothetical protein CLOSTMETH_03903 [Clostridium methylpentosum DSM 5476] Length = 432 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 124/422 (29%), Positives = 189/422 (44%), Gaps = 15/422 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANS 63 +G L V LA+ TP Y + +N F ++ D +VCYA KA Sbjct: 11 QQGHLTIGGVDTIDLANEYGTPLYVVDEDLVRENCRLFKDSIDRYYGGRGLVCYASKAFC 70 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 + + + + G+D+VS GE+ ALAA PAE++ F G KT E+ AL++G+ Sbjct: 71 CKEIYRVMEDEQIGVDVVSIGEIYTALAAGFPAEKMCFHGNNKTAGELYYALENGVGRII 130 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SL 181 V++ +EL+ LN A GK+ I RV P I+A+TH I TG+ + KFG I Sbjct: 131 VDNLNELERLNALAAEQGKRPNILLRVKPGIDAHTHSFIRTGQIDSKFGFAIETGEALEA 190 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGL 240 AS + V + G HIGSQI I+ F A +++ ++ + +++GGG Sbjct: 191 AKEASAMEHVNLVGAHCHIGSQIFDIDPFVLAAEVMMGYIAAVKKETGVELTDLNLGGGF 250 Query: 241 GIAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 GI Y + P Y G I+LEPGR ++ GI + V + Sbjct: 251 GIKYTDEDHPVPYDRYMEQVSAKVKEEAARLGLKVPFILLEPGRSIIGPAGITLYTVGAR 310 Query: 294 KKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K+ D +D M D R LY + +++ + I + G CE+GD I Sbjct: 311 KEIPDIRTYLSIDGGMTDNPRYALYQSKYDVVLANKANQPKDDII-TLAGKCCESGDLIG 369 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 KI GD++ + TGAY S YN + V Q ++ R T ++L+ Sbjct: 370 EGLKIQRGDAGDIVAVLATGAYNYAMSSNYNRVTKPAVVFVRNGQSRLVVKRETLEDLVR 429 Query: 413 LD 414 D Sbjct: 430 ND 431 >gi|78184964|ref|YP_377399.1| diaminopimelate decarboxylase [Synechococcus sp. CC9902] gi|78169258|gb|ABB26355.1| diaminopimelate decarboxylase [Synechococcus sp. CC9902] Length = 459 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 115/426 (26%), Positives = 187/426 (43%), Gaps = 13/426 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 + L + L LA TP Y T + + +A ++ YA KANS+ Sbjct: 34 DDRLVVGDCLLSDLAQRYGTPLYVLDETTLRSTCRAYRDALKRHYPGPSLPIYASKANSS 93 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + +A G GLD VS GEL AL +P R+V G K+ +E+ LA + V Sbjct: 94 LVMSSLVASEGLGLDAVSAGELLTALRGGMPGNRMVLHGNNKSDEELLLAYNN-NVTVVV 152 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +++ +L L+ G + R P I +TH+ I TG + KFG Q+ + Sbjct: 153 DNQHDLDRLSALIPHDGAPVRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQVEPVLRG 212 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 K++G+ HIGSQI ++E ++ D + R GH ++ ++VGGGLGI Y Sbjct: 213 LVGQSWAKLTGLHAHIGSQIFELEPHRDLAAVMADALKLARDLGHPVEDLNVGGGLGIRY 272 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVISIKKSA 297 PPS + ++ + +++ EPGR LVA G+ + V S K Sbjct: 273 VKSDDPPSIDRWVQVVAEAVIAACQARSLDLPRLMCEPGRSLVATAGVTLYTVGSRKTIP 332 Query: 298 DKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + +D M+D RP Y + + P + ++VG CE+GD + + Sbjct: 333 GVRTYVAIDGGMSDNPRPITYQSLYTCCVADRPLAETD-ETVNLVGKHCESGDVLLKDLP 391 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD++ + TGAY A S YN ++V+ +++ R +L+ D + Sbjct: 392 LPSTTSGDVIAVFATGAYNASMSSNYNRIPRPAAVLVHDGAAELVQKREQPDDLLRYDVL 451 Query: 417 PAWLQK 422 P K Sbjct: 452 PQRFHK 457 >gi|257056970|ref|YP_003134802.1| diaminopimelate decarboxylase [Saccharomonospora viridis DSM 43017] gi|256586842|gb|ACU97975.1| diaminopimelate decarboxylase [Saccharomonospora viridis DSM 43017] Length = 479 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 113/433 (26%), Positives = 188/433 (43%), Gaps = 26/433 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V + +LA TP + + ++ AF+ +V YA KA V Sbjct: 47 DGVVRIAGVDVRELARTYGTPLFVIDEVDFKARCAEYAEAFED-PALVHYAAKAFLCTEV 105 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ S GEL A A P ERI F G K++ E++ A+++G+ ++S Sbjct: 106 ARWVAEKGLSLDVCSGGELAVAQRAQFPPERITFHGNNKSLAELEAAVEAGVGLVVLDSY 165 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYA 185 E+ L + A G + RV + A+TH+ I+T ++ KFG + Sbjct: 166 YEIARLAEIAQRHGVVQQVLVRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRV 225 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-----HIDVGGGL 240 P +K+ G+ HIGSQI + F A + + L +LR ID+GGG Sbjct: 226 LNSPSLKLVGLHSHIGSQIFDTDGFEVAARRVVGLLAELRKEHGPELIEQLSVIDLGGGF 285 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISI 293 GI+Y PP + + I + +I EPGR + + + +V +I Sbjct: 286 GISYTDRDNPPPPAQMITQIREIVRKECAFADLPVPRIAGEPGRAIAGPGTVTLYEVGTI 345 Query: 294 KKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA-----DIVGP 343 K + +V +D M+D +R LYDA ++ + + D +VG Sbjct: 346 KDVTLGEGTSRRYVSVDGGMSDNIRTALYDAAYDCRLVSRSSDDGQPGEVKAVLSRVVGK 405 Query: 344 ICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIR 402 CE+GD + + + PGDLL + TGAY + YN + + V ++ Sbjct: 406 HCESGDIVVRDCWLPDTLAPGDLLAVAATGAYCYSMASNYNKQPKPAVVAVRNGNHRLLL 465 Query: 403 PRMTFQELIELDS 415 R T +++ L+ Sbjct: 466 RRETNEDMFRLEV 478 >gi|90961979|ref|YP_535895.1| diaminopimelate decarboxylase [Lactobacillus salivarius UCC118] gi|90821173|gb|ABD99812.1| Diaminopimelate decarboxylase [Lactobacillus salivarius UCC118] Length = 430 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 122/422 (28%), Positives = 192/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVC--YALKANSNQ 65 EG + +LA TP Y I++ F F+ + YA KA S+ Sbjct: 10 EGHYTIGGLDSLELAKEFGTPTIVYDVAKIKEQIAKFKAGFEEENVKYHISYASKAFSSL 69 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ +A G G D+VS GEL AL + + + F G K+ E+++A+ S + V+ Sbjct: 70 AMYDLVAKSGIGSDVVSGGELYAALKGGMDPQELEFHGNNKSRAELEMAVDSNVGYIIVD 129 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + E+ LN+ K A I R+ P I+A TH+ ISTG+ + KFG + + A Sbjct: 130 NFYEIDLLNEVLTEKNKTADILLRLAPGIHAETHEYISTGQAKSKFGFDLQSGQASEALE 189 Query: 186 STL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGGGLGI 242 TL P K+ GV HIGSQI F +A K L D + + +++GGG GI Sbjct: 190 KTLANPRFKVLGVHSHIGSQIFATAGFVEAAKKLMDFLSAWKEKYDFTAEVLNLGGGFGI 249 Query: 243 AYHSDHRPPSSSDYASLIHQYF-------GNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P D+ +I + I +EPGR +V + G+ + V S K Sbjct: 250 RYTDQDEPLDVKDFVKIIVEAVKEKSKELNYPMPAIWIEPGRSVVGEAGVSLYTVGSRKD 309 Query: 296 SADK-TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +FV +D M D +RP LY A ++ + +A IVG CE+GD + + Sbjct: 310 VEGVGSFVAVDGGMGDNIRPALYGAEYDAVL-AKDPNAPIAQNASIVGKYCESGDILIKD 368 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 PGD++ + TGAYG V + YN + V + ++ R +++++I + Sbjct: 369 YDFPKTEPGDVIAMLSTGAYGYVMASNYNRNPRPAIVFVEDGKARLVVKRESYEDMIRNE 428 Query: 415 SI 416 + Sbjct: 429 IL 430 >gi|86609104|ref|YP_477866.1| diaminopimelate decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557646|gb|ABD02603.1| diaminopimelate decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 459 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 20/431 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 G L + +L +P Y + + + + + + V YA KA + Sbjct: 32 GHLEIGGCDVVELVRQFGSPLYILDEWTLRRACQLYRDTWARCYAGGSRVLYATKAWNCL 91 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ G GLD+ S GEL AL A E + G K++DE++LAL++G Sbjct: 92 AICALALQEGLGLDVASGGELYTALQAGAKGEDLYLHGNAKSLDELNLALETGCTLVVDS 151 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + + A + RVNP I+ +TH+ I TG+ + KFGI Q+ ++ + Sbjct: 152 LYE--LQQVSALTTPARPARLLLRVNPGIDVHTHEYIRTGQTDSKFGIGQWQLPEVFDFL 209 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + P ++ G+ HIGSQI ++ +L + +Q G +Q ++VGGGLGI Y Sbjct: 210 AAHPQLQCVGLHAHIGSQIFDLQGHRDLAGVLAQIWRQGLGRGLPLQELNVGGGLGIRYI 269 Query: 246 SDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA- 297 PPS ++ + K++ EPGR ++ + + K+ Sbjct: 270 ESDDPPSIPEWVETVATAVQQAFAQSGIPLPKVLCEPGRSVIGPAAVTAYTLGGQKRIPP 329 Query: 298 ------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 +T++ +D M+D RP Y A + + N + G CE+GD + Sbjct: 330 SDDLPQGRTYITIDGGMSDNPRPITYQARY-TALLANRPEAEATQRVTVAGKHCESGDVL 388 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + P G++L + TGAY + YN ++VN + +I R T+ +LI Sbjct: 389 LKDVLLPAPMAGEVLVVLATGAYNYSMASNYNRFPRPAAVLVNEGEAQLIVRRETYADLI 448 Query: 412 ELDSIPAWLQK 422 D +P L + Sbjct: 449 RQDVLPERLLR 459 >gi|300789615|ref|YP_003769906.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] gi|299799129|gb|ADJ49504.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] Length = 476 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 116/438 (26%), Positives = 194/438 (44%), Gaps = 25/438 (5%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + F+ +G + V + +LA TP + + ++ AFD ++V YA KA Sbjct: 40 NTFRAADGVVRIAGVDVRELAEQHGTPLFVVDEADFKSRCADYAEAFDD-PSLVHYASKA 98 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + + + +A G LD+ S GEL A A PAERI F G K+ E++ A+ +G+ Sbjct: 99 FLSIEIARWVAEQGLSLDVCSGGELAVAQRADFPAERITFHGNNKSPAELEAAVVAGVGT 158 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 ++S E+ L A + RV + A+TH+ I+T ++ KFG + + Sbjct: 159 VVLDSYFEIARLADIAARHDVVQSVLIRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAA 218 Query: 182 YAYASTLPGV--KISGVDMHIGSQIDQIESFHKAFKLLRD-----LTQQLRSNGHNIQHI 234 A L K+ G+ HIGSQI + F A + + + + + Sbjct: 219 EAVRRVLNARSLKLVGLHSHIGSQIFDADGFEVAARRVVGLLADLAKEHGPELLDQLSLV 278 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILV 287 D+GGG GIAY PP + + I + +I EPGR + I + Sbjct: 279 DLGGGFGIAYTEKDNPPPPAQMITQIREIVRKECAYAGLPVPRIAGEPGRAIAGPGTITL 338 Query: 288 TKVISIKK-----SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH----IHA 338 +V +IK + + +V +D M+D +R LYDA +++ + AGD + + Sbjct: 339 YEVGTIKDVSLGDESARRYVSVDGGMSDNIRTALYDAVYDVRLVSRSAGDNEQPVPAVLS 398 Query: 339 DIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ 397 +VG CE+GD + + + PGDLL + TGAY + TYN + V Sbjct: 399 RVVGKHCESGDIVVRDCWLPDTLAPGDLLAVAATGAYCYSMASTYNRMPRPAVVAVRNGS 458 Query: 398 FHIIRPRMTFQELIELDS 415 ++ R T +++ L+ Sbjct: 459 SRLLLRRETTDDMLRLEV 476 >gi|116493670|ref|YP_805404.1| diaminopimelate decarboxylase [Lactobacillus casei ATCC 334] gi|116103820|gb|ABJ68962.1| diaminopimelate decarboxylase [Lactobacillus casei ATCC 334] Length = 448 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 112/426 (26%), Positives = 170/426 (39%), Gaps = 12/426 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYA 58 M EG L V+ +LA QTP Y Y AI + F F+ D V YA Sbjct: 1 MDFATNHEGQLTIGGVAASQLARTFQTPLYVYDIGAIRQQIRAFKRVFEEADVSYAVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + A+ + G+ +D+VS GEL A AA P + F G K+ E+ AL +G Sbjct: 61 SKAFATIAMYEVAKSEGAHVDVVSGGELYTAQAADFPMAAVSFHGNNKSKAELTQALDAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL L+ + + RV P I+A+TH TG+ + KFG + Sbjct: 121 VGTIIVDNFHELDLLDDLLGDTVGQQDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASG 180 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHID 235 + A L + + G+ HIGSQI ++ F + L + + G + ++ Sbjct: 181 QADEAAKRILADDHLNLLGIHAHIGSQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLN 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVT 288 VGGG GIAY P + Q I +EPGR +V G + Sbjct: 241 VGGGFGIAYTKQDDPLPPEAFVKAILATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLY 300 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V S K + + + H +VG CE+G Sbjct: 301 TVGSRKDVPGLRPYVAVDGGMGDNIRPALYQATYTAVLADQPNAAPAEHVHLVGKYCESG 360 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + GD++ + TGAYG + YN + V Q ++ R T Sbjct: 361 DILIDDAPLPTTTSGDVVVVFDTGAYGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDA 420 Query: 409 ELIELD 414 +LI+ D Sbjct: 421 DLIKND 426 >gi|294633676|ref|ZP_06712234.1| diaminopimelate decarboxylase [Streptomyces sp. e14] gi|292830318|gb|EFF88669.1| diaminopimelate decarboxylase [Streptomyces sp. e14] Length = 444 Score = 255 bits (652), Expect = 7e-66, Method: Composition-based stats. Identities = 119/418 (28%), Positives = 197/418 (47%), Gaps = 15/418 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G+L V L ++A TP Y + + +AF D + YA KA +A+I Sbjct: 29 GALAVGGVPLAEIADRFGTPVYVLDEAEVRTRCRAYRDAFP--DAEILYAAKAFLCRAMI 86 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + G GLD+ S GEL A+ PAERIV G K+ +++ AL+ G+ ++S S Sbjct: 87 HWMDEEGLGLDVCSAGELELAVTTGFPAERIVLHGNAKSPRDLESALRLGVGRIVIDSPS 146 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E+ L G + + RV P I+A H+KI TG ++ KFG+ I + +A TL Sbjct: 147 EIARLAAAVGPRGHQ-KVMVRVAPGISAGGHEKIRTGTEDQKFGLSISDGCAQHAITRTL 205 Query: 189 --PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGIAYH 245 P ++++G+ H+GSQI +E + A + + L +G + +D+GGG GIAY Sbjct: 206 EQPQLELTGLHCHLGSQITSVEPYLSAVRRIAALMAGLHGQHGLVLPELDLGGGHGIAYR 265 Query: 246 SDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSAD 298 + A + ++I+EPGR + GI + +V+++K++ + Sbjct: 266 PGEPALDPTTLAREVRTELTGACAAAGLPVPRLIIEPGRAIAGPAGIALYRVLAVKRTGE 325 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 +T+V +D M+D RP LY + ++ +VG CE GD +A + ++ Sbjct: 326 RTYVAVDGGMSDNPRPALYGVRY-APCLIGRRTTAEPALVTVVGRHCEAGDVLAADVELP 384 Query: 359 -LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 RPGDLL + GAY + YN P V + ++ R + ++ D Sbjct: 385 ADVRPGDLLAVPAAGAYHLSMASGYNLVGRPPVAAVRDGRARLLVRRESLDDIRSRDV 442 >gi|169342342|ref|ZP_02628915.2| diaminopimelate decarboxylase [Clostridium perfringens C str. JGS1495] gi|169299567|gb|EDS81630.1| diaminopimelate decarboxylase [Clostridium perfringens C str. JGS1495] Length = 431 Score = 255 bits (652), Expect = 7e-66, Method: Composition-based stats. Identities = 122/427 (28%), Positives = 195/427 (45%), Gaps = 14/427 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALK 60 + K L+ V L+ TP Y + N + NA V YA K Sbjct: 6 SMKVEGNELYVGGVKASALSKEYGTPLYVIDEELVRSNCRRYYNAMKCEERGNRVTYAGK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A N ++ + LD+VS GEL A A P ERI F G K+ EIDL ++ GI Sbjct: 66 AFINMSMCNLVNEENLYLDVVSGGELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIG 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F V++ EL+ LN A G+ + R+ P + A+TH+ I TG+ + KFG P+ Sbjct: 126 RFIVDNIHELEVLNSIAQEYGRVQKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTV 185 Query: 181 LY--AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD-LTQQLRSNGHNIQHIDVG 237 A L ++++G+ HIGSQI +E F +++ + + + G+ I+ +D+G Sbjct: 186 YDAIKRAMELEYIELNGLHCHIGSQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLG 245 Query: 238 GGLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG GI Y +P +Y A I + + +EPGR +V + G+ + V Sbjct: 246 GGFGIYYTEGDKPKEIEEYCSVIINKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTV 305 Query: 291 ISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 +IK+ + +D M+D +RP LY A +E N D + G CE+GD Sbjct: 306 GAIKEIPNIRKYVSVDGGMSDNIRPALYSANYESII-ANRVFDNSKEIVTVAGKCCESGD 364 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + ++ GD+L I TGAYG + YN + V+ ++ R T+++ Sbjct: 365 VLLNSIEMPRMETGDILAIISTGAYGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYED 424 Query: 410 LIELDSI 416 L+ + Sbjct: 425 LLRNECF 431 >gi|227533417|ref|ZP_03963466.1| diaminopimelate decarboxylase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188983|gb|EEI69050.1| diaminopimelate decarboxylase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 448 Score = 255 bits (652), Expect = 7e-66, Method: Composition-based stats. Identities = 112/426 (26%), Positives = 171/426 (40%), Gaps = 12/426 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYA 58 M EG L V+ +LA QTP Y Y AI + F F+ D V YA Sbjct: 1 MDFATNHEGQLTIGGVAASQLARTFQTPLYVYDVGAIRQQIRAFKRVFEEADVSYAVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + A+ + G+ +D+VS GEL A AA P + F G K+ E+ AL +G Sbjct: 61 SKAFATIAMYEVAKSEGAHVDVVSGGELYTAQAADFPTAAVSFHGNNKSKAELTQALDAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL L+ + + + RV P I+A+TH TG+ + KFG + Sbjct: 121 VGTIIVDNFHELDLLDDLLGATVGQQDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASG 180 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHID 235 + A L + + G+ HIGSQI ++ F + L + + G + ++ Sbjct: 181 QADEAAKRILADDHLNLLGIHAHIGSQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLN 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVT 288 VGGG GIAY P + Q I +EPGR +V G + Sbjct: 241 VGGGFGIAYTKQDDPLPPEAFVKAILATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLY 300 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V S K + + + H +VG CE+G Sbjct: 301 TVGSRKDVPGLRPYVAVDGGMGDNIRPALYQATYTAVLADQPNAAPAEHVHLVGKYCESG 360 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + GD++ + TGAYG + YN + V Q ++ R T Sbjct: 361 DILIDDAPLPTTTSGDVVVVFDTGAYGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDA 420 Query: 409 ELIELD 414 +LI+ D Sbjct: 421 DLIKND 426 >gi|257883703|ref|ZP_05663356.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,501] gi|257819541|gb|EEV46689.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,501] Length = 419 Score = 255 bits (652), Expect = 7e-66, Method: Composition-based stats. Identities = 105/413 (25%), Positives = 169/413 (40%), Gaps = 8/413 (1%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAV 67 L V+ LA +TP Y Y + + L+F F DT V YA KA + Sbjct: 3 ELIIGGVTASTLAEKYKTPLYVYDEEKMRQTMLSFKRGFVSKRFDTKVLYASKAFQTIEM 62 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G GLD+VS GE+ AL A P + I F G KT +E+ AL++ + ++ Sbjct: 63 LHLVREYGFGLDVVSGGEIYTALQADFPRDTIYFHGNNKTPEELIYALENDLLHIVADNL 122 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY--A 185 E++ L + + KK I R+N + A+TH+ I T + KFG+ A Sbjct: 123 MEVELLAELSQRYLKKICIMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLI 182 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 +++ G HIGSQI + ++ L + G Sbjct: 183 KESSYLELEGFHAHIGSQIFDVTAWLAEIDKLTNYLTDFDQPLSLNLGGGFGIRYTQNDQ 242 Query: 246 SDHRPPSSSDYASLIHQY---FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 + + ++++EPGR +V + G + + IKK+ K + Sbjct: 243 PIPVEEALKKLIEYTEEALEKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYY 302 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +D M D +RP LY A ++ + + I G +CE+GD + + Sbjct: 303 FVDGGMTDNIRPALYQAEYDCDLAAK-LSEEKTEKVTIAGKMCESGDVVIKEAYLPKAES 361 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GDLL + TGAYG S YN + VN Q ++ R F +L+ + Sbjct: 362 GDLLAVYSTGAYGYSMSSNYNRATRPAVVFVNNGQSRLVVRRQAFSDLLRGEV 414 >gi|160916126|ref|ZP_02078333.1| hypothetical protein EUBDOL_02153 [Eubacterium dolichum DSM 3991] gi|158431850|gb|EDP10139.1| hypothetical protein EUBDOL_02153 [Eubacterium dolichum DSM 3991] Length = 428 Score = 255 bits (652), Expect = 8e-66, Method: Composition-based stats. Identities = 124/425 (29%), Positives = 202/425 (47%), Gaps = 16/425 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 + L VS+E+LA QTP Y Y I F + F D ++T V YA KA + Sbjct: 2 NKNMLEIGGVSVEQLAKSCQTPLYIYDEEKISTKLAQFHDLFQSDALETEVLYASKAFTC 61 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +A+++ + G LD+VS GEL A A P ER+ F G K+ +E+ +AL GI V Sbjct: 62 KALLELVKQHGLSLDVVSGGELYVAKQADFPMERVYFHGNNKSYEELQMALSYGIGTIVV 121 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E + L Q A G RVNP + A+THK I T + KFG I + Sbjct: 122 DNAMECELLVQVAKQSGHSVKALLRVNPGVEAHTHKYIVTAHLDSKFGTSITHKEEIAHM 181 Query: 185 ASTL---PGVKISGVDMHIGSQIDQIESFHKAFKL-LRDLTQQLRSNGHNIQHIDVGGGL 240 TL P + G HIGSQI ++ + ++ + + + +++GGG Sbjct: 182 VQTLSAIPNIHFEGFHSHIGSQIFDANAYVAEIQTLMKFVYELQEEYQIQTKALNLGGGF 241 Query: 241 GIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 Y ++ +P S+ S + + + CK+++EPGR +VA+ G + +V Sbjct: 242 AAYYTAEDKPIPLSEVCSTILDTCSMEKERYQLPLCKVMIEPGRSIVAEAGSTLYRVGFT 301 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K++A+K +V +D M+D +RP LY A + + N + I G CE+GD + Sbjct: 302 KQTANKKYVFVDGGMSDNIRPALYQAAYAC-DLANRMNEEKCEKVTIAGKCCESGDILIE 360 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE--LI 411 + + + DLL + TGAYG + YN + V + I+ R ++++ ++ Sbjct: 361 DVMLPHAQRNDLLILYTTGAYGYSMASNYNRLGRPAVVFVKNGKARIVVKRESYEDMCMM 420 Query: 412 ELDSI 416 E D + Sbjct: 421 ECDEL 425 >gi|313676255|ref|YP_004054251.1| diaminopimelate decarboxylase [Marivirga tractuosa DSM 4126] gi|312942953|gb|ADR22143.1| diaminopimelate decarboxylase [Marivirga tractuosa DSM 4126] Length = 402 Score = 255 bits (652), Expect = 8e-66, Method: Composition-based stats. Identities = 126/413 (30%), Positives = 192/413 (46%), Gaps = 18/413 (4%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 EN L LA TP Y Y I ++AF G++ + YA KA SN +V+K + Sbjct: 1 MENTVLTSLAKKYGTPLYVYDADKIASQIKRLNDAFSGINLKLKYATKALSNVSVLKWMK 60 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G+GLD+VS E L A + I+++ +IDEI A+ G+ + Sbjct: 61 KHGTGLDVVSIQEAYLGLKAGFEPKDILYTPNCVSIDEIIEAVDLGLMINIDN----ISI 116 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L Q P+ R+NP I A + KISTG + KFGI I Q+ L + Sbjct: 117 LEQFGHRYHDTVPVCIRLNPHIMAGGNSKISTGHIDSKFGISILQMRHLLRVIENY-NIN 175 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + G+ +H GS I E F + +++ + + NI ID G G +AY Sbjct: 176 VVGLHIHTGSDILDSEVFLRGTEIIF----EAAEDFPNIDFIDFGSGFKVAYKEGDVTTD 231 Query: 253 SSDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 + + + F EPG+FLV++ G ++KV IK + FV LD Sbjct: 232 IEELGKEVSKRFKAFCKSRGKDLELWFEPGKFLVSEAGYFLSKVNVIKTTPATVFVGLDT 291 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 MN +RP +YDAYH I I NP+ +VG ICET D +R+++ + GD++ Sbjct: 292 GMNHLLRPMMYDAYHHIENISNPSD--TQRVYTVVGYICET-DTFGTDRRLSEVKQGDII 348 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 I+ GAYG + YNSR E++V+ + ++R R + +L+ I + Sbjct: 349 AIKNAGAYGFSMASNYNSRYRPAEVLVHEGKDQLVRKRESLDDLLRNQVIVDF 401 >gi|258538295|ref|YP_003172794.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus Lc 705] gi|257149971|emb|CAR88943.1| Diaminopimelate decarboxylase [Lactobacillus rhamnosus Lc 705] Length = 447 Score = 255 bits (652), Expect = 8e-66, Method: Composition-based stats. Identities = 108/427 (25%), Positives = 170/427 (39%), Gaps = 12/427 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ EG L V +L H QTP Y Y AI F F+ G+ V YA Sbjct: 1 MNFATNHEGQLTIGGVVASQLVHTFQTPLYVYDVGAIRHQIRAFKQVFETAGVAYAVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + A+ + +D+VS GEL A AA P +++ F G K+ E++ AL +G Sbjct: 61 SKAFATIAMYEVAKAEAIHVDVVSGGELYTAQAAGFPMDKVSFHGNNKSKAELEQALDAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL L++ + K + RV P I+A+TH TG+ + KFG + Sbjct: 121 VGTIIVDNFHELDLLDELLKAAVGKQNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESG 180 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIE---SFHKAFKLLRDLTQQLRSNGHNIQHID 235 + A L ++ + +H E KLL L + G + ++ Sbjct: 181 QADEAAKRILADDHLNLLGIHAHIGSQIFEVAGFEAVTQKLLAVLDHWHQQFGFIPKVLN 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVT 288 VGGG GIAY P + + F + +EPGR +V G + Sbjct: 241 VGGGFGIAYTKQDDPLPPEAFVQAIVTTLKIQSHGFNWPLPAVWIEPGRSIVGPAGYSLY 300 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V S K + + + + +VG CE+G Sbjct: 301 TVGSRKDVPGLRPYVAVDGGMGDNIRPALYQAQYTAVVADHPTAQPTERVHLVGKYCESG 360 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + PGD++ + TGAYG + YN + V Q ++ R T+ Sbjct: 361 DILIDDAPLPATHPGDVVAVFDTGAYGYSMASNYNRNPRPAVVFVENGQAQLVVTRETYA 420 Query: 409 ELIELDS 415 +LI+ D Sbjct: 421 DLIQHDQ 427 >gi|296111895|ref|YP_003622277.1| diaminopimelate decarboxylase [Leuconostoc kimchii IMSNU 11154] gi|295833427|gb|ADG41308.1| diaminopimelate decarboxylase [Leuconostoc kimchii IMSNU 11154] Length = 433 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 123/426 (28%), Positives = 182/426 (42%), Gaps = 14/426 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 MS L + V LA TP Y Y T I + F F+ G+ +V YA Sbjct: 1 MSYPTNELQHLTIDGVDAVTLAKTYGTPLYVYDVTKIRQTMRAFKTIFEKEGVPYVVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + QA+ + G DIVS GEL AL A + + F+G K+ DE+ +A+++G Sbjct: 61 SKAFATQAIYQVAQQEGIHADIVSGGELFTALQAGFDPKHLSFNGNNKSWDELTMAIEAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL+ L++ A I R++P I+A+TH+ ISTG+++ KFG + Sbjct: 121 VGMIIVDNFLELQLLSEIAAKHNMTQDILLRISPGISAHTHEFISTGQQDSKFGFDLLTG 180 Query: 179 HSLYAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 AY A + + G+ HIGSQI + F K LL D Q I+V Sbjct: 181 QGKQAYDIAKDDQNLNLLGLHAHIGSQIFDVTGFEKNAALLADTAQSWGWQ---PAIINV 237 Query: 237 GGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 GGG GI Y + P SDYA + +I +EPGR +V G + Sbjct: 238 GGGFGIRYTDEDTPLPESDYADAIIRTLKSKAAQYDWKMPEIWIEPGRSVVGPAGQTLYT 297 Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 V S K D + + + N + G CE+GD Sbjct: 298 VGSRKDIPDLRQYLAVDGGMGDNIRPALYQANYDAVLANQPNAPTEEVVRVAGKYCESGD 357 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + + +PGD+L + TGAYG + YN + V Q ++ R T+ Sbjct: 358 VLVWQQALPRTQPGDILSVLATGAYGYAMASNYNRNPRPGVVFVENGQHQLVVARETYAN 417 Query: 410 LIELDS 415 L LD Sbjct: 418 LTALDK 423 >gi|229550994|ref|ZP_04439719.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus LMS2-1] gi|229315589|gb|EEN81562.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus LMS2-1] Length = 447 Score = 255 bits (652), Expect = 9e-66, Method: Composition-based stats. Identities = 108/427 (25%), Positives = 169/427 (39%), Gaps = 12/427 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ EG L V +L H QTP Y Y AI F F+ G+ V YA Sbjct: 1 MNFATNHEGQLTIGGVVASQLVHTFQTPLYVYDVGAIRHQIRAFKQVFETAGVAYAVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + A+ + +D+VS GEL A AA P +++ F G K+ E++ AL +G Sbjct: 61 SKAFATIAMYEVAKAEAIHVDVVSGGELYTAQAAGFPMDKVSFHGNNKSKAELEQALDAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL L++ + K + RV P I+A+TH TG+ + KFG + Sbjct: 121 VGTIIVDNFHELDLLDELLKAAVGKQNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESG 180 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIE---SFHKAFKLLRDLTQQLRSNGHNIQHID 235 + A L ++ + +H E KLL L + G + ++ Sbjct: 181 QADEAAKRILADDHLNLLGIHAHIGSQIFEVAGFEAVTQKLLAVLDHWHQQFGFIPKVLN 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVT 288 VGGG GIAY P + F + +EPGR +V G + Sbjct: 241 VGGGFGIAYTKQDDPLPPEAFVQAIVTTLKTQSHGFNWPLPAVWIEPGRSIVGPAGYSLY 300 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V S K + + + + +VG CE+G Sbjct: 301 TVGSRKDVPGLRPYVAVDGGMGDNIRPALYQAQYTAVVADHPTAQPTERVHLVGKYCESG 360 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + PGD++ + TGAYG + YN + V Q ++ R T+ Sbjct: 361 DILIDDAPLPATHPGDVVAVFDTGAYGYSMASNYNRNPRPAVVFVENGQAQLVVTRETYA 420 Query: 409 ELIELDS 415 +LI+ D Sbjct: 421 DLIQHDQ 427 >gi|296115244|ref|ZP_06833885.1| diaminopimelate decarboxylase [Gluconacetobacter hansenii ATCC 23769] gi|295978345|gb|EFG85082.1| diaminopimelate decarboxylase [Gluconacetobacter hansenii ATCC 23769] Length = 452 Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats. Identities = 164/420 (39%), Positives = 244/420 (58%), Gaps = 6/420 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALK 60 + +G L E+V L +A + TP + + Y A G+D + +A+K Sbjct: 26 SMHAIDG-LVFEDVPLNAIADALGTPTWVMGAQTLRTRYHRLDRAMRDAGLDVDIHFAVK 84 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN + A++K L G+G D+VS GELRRA+AA +PA IVFSGVGKT E++LAL GI Sbjct: 85 ANDHLAILKILHAQGAGADVVSGGELRRAIAAGIPAREIVFSGVGKTRAEMELALHHGIA 144 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 NVES EL L+ AV+ G+ AP+A R+NPD++A TH KI+TG +KFGIP + Sbjct: 145 RINVESAEELDLLSAVAVACGRTAPVALRINPDVDAGTHAKITTGLAGNKFGIPYDRAVE 204 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA+A++LPG+ +GV +HIGSQI++++ + A+ + DL + +R+ G + ID GGGL Sbjct: 205 LYAHAASLPGIHAAGVAVHIGSQIERMQPYRAAYARVADLVRAIRARGLGVDVIDCGGGL 264 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV--ISIKKSAD 298 GI+Y + + A I G+L ++ +EPGR+L G+L++ V Sbjct: 265 GISYRHETEG-APEALAHAIRIELGDLGTRLEIEPGRWLAGPAGVLLSTVVLRKRGYDGM 323 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 F++LD AMND RP+LYDA+H I + +VGP+CE+GD +R + Sbjct: 324 PPFIVLDAAMNDLARPSLYDAWHGIIPLSARDAVAPSEQVHVVGPVCESGDTFGHDRTLP 383 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 G + + TGAYG V S TYN+R + +++V+GS++ +IR R + L D IP Sbjct: 384 RLHDGARVALLDTGAYGMVMSSTYNARAMAAQVLVDGSRWDVIRARQKVESLWAGDIIPD 443 >gi|327183372|gb|AEA31819.1| diaminopimelate decarboxylase [Lactobacillus amylovorus GRL 1118] Length = 436 Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats. Identities = 120/422 (28%), Positives = 192/422 (45%), Gaps = 14/422 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSN 64 +G L V +LA TP Y I F F+ V YA KA + Sbjct: 12 EKGHLTIGGVDTVELAQKYGTPLVVYDVEQIRNQIRAFKKVFEKEKVAYAVSYASKAFAC 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ + G+ D+VS GEL AL A P ERI F G K++ EI++A+++ + + Sbjct: 72 IAMYQVANEEGAYTDVVSAGELYTALKANFPTERISFHGNNKSLFEIEMAVKNHVGKIII 131 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E+K L++ K + R+ P I+A+TH+ TG+ + KFG + + A Sbjct: 132 DNFHEIKLLDKVLREQDAKINVMLRITPGISAHTHEYDQTGQVDSKFGFDLESGQADLAL 191 Query: 185 ASTLPG--VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLG 241 L + + G+ HIGSQI ++ F A K L ++ + R G+ + I+VGGG G Sbjct: 192 EQVLANSRMNMVGIHAHIGSQIFELNGFEMAAKKLMEVAENWRSQYGYTAKVINVGGGFG 251 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL-------EPGRFLVADVGILVTKVISIK 294 I Y ++ P ++ I + + EPGR +V G + S K Sbjct: 252 IKYTAEDNPLKPEEFVQAIVETIKKEAKEAAFPVPEIDIEPGRSIVGPAGYNLYTTGSRK 311 Query: 295 KS-ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + +V +D M D +RP LY A +E +P L H I G CE+GD +A Sbjct: 312 VVLGYRPYVTVDGGMGDNIRPALYGAKYETVLATDPKA-PLTEHVRIAGKYCESGDILAE 370 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 ++ + + G LL + TGAYG + YN + V + ++ R + ++L+ L Sbjct: 371 DQALPATKSGSLLAMLDTGAYGYSMASNYNRNPRPAVVFVENCKAKLVIKRESLEDLVHL 430 Query: 414 DS 415 D Sbjct: 431 DQ 432 >gi|78779484|ref|YP_397596.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9312] gi|78712983|gb|ABB50160.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9312] Length = 457 Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats. Identities = 122/429 (28%), Positives = 201/429 (46%), Gaps = 12/429 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANS 63 +G L S+E+L +P Y + + + NA + ++ YA KANS Sbjct: 30 NDGKLSVGGCSIEELVKKYDSPLYILDEITLRNSCRAYKNALEKYYPGKSLPIYASKANS 89 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 + + ++ G GLD VSEGEL AL VP E+IVF G K+ EI+ A Sbjct: 90 SIFMSNLVSSEGLGLDAVSEGELLTALKGGVPNEKIVFHGNNKSDKEIEFA-VRNNIQVI 148 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 V+++ +L+ L + S + I R P I +TH+ I TG + KFG I ++ L+ Sbjct: 149 VDNDYDLERLEGISNSFNRDLEIMIRFTPGIECHTHEYIRTGSFDSKFGFGIEYLNILFD 208 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + +K+ G+ HIGSQI +++ +++ ++ + GHNIQ +++GGGLGI Sbjct: 209 RINNTKHLKLKGLHAHIGSQIFELDPHKDLGEIMVNVILDAKKFGHNIQKLNLGGGLGIK 268 Query: 244 YHSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + PPS ++ I + ++ EPGR +V+ GI + K+ + K+ Sbjct: 269 YTENDDPPSIDEWVKTISTSVVKACKKHNLDLPTLMCEPGRSIVSTAGITIYKIGAFKEI 328 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M+D RP Y + + + NP I G CE+GD + Sbjct: 329 PGIRTYLSVDGGMSDNPRPITYQSNYSACLVSNPFNINSKNKYTIAGKHCESGDVLFKEI 388 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++A + GDL+ + TGAY S YN ++V + II+ R + +L++ D Sbjct: 389 ELADCKTGDLICVFGTGAYNNSMSSNYNRIPRPAALLVCNGEAEIIQKRESPFDLLKYDV 448 Query: 416 IPAWLQKTP 424 +P K Sbjct: 449 LPDRFLKQN 457 >gi|169334033|ref|ZP_02861226.1| hypothetical protein ANASTE_00426 [Anaerofustis stercorihominis DSM 17244] gi|169258750|gb|EDS72716.1| hypothetical protein ANASTE_00426 [Anaerofustis stercorihominis DSM 17244] Length = 424 Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats. Identities = 119/424 (28%), Positives = 195/424 (45%), Gaps = 12/424 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 LA TP Y S I + +F+ G+D + YA KA +N Sbjct: 2 NEHFIFAGHDTVALAKKFGTPLYVISENKIIEAIDLIKKSFEEYGLDYDINYAGKAFTNI 61 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A++K + G LD VS GE+ AL A + +RI F G K+ EI A+++G+ ++ Sbjct: 62 AMVKIIKQQGISLDTVSGGEIYTALKAGLDPKRICFHGSNKSAQEIREAIEAGVGVITID 121 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 S E+ + + A L + FRV+P + A+TH+ I TG+ + KFGIP++ Sbjct: 122 SFYEIGLVGRIAKELETVQNVHFRVSPGVEAHTHEYIQTGRIDSKFGIPVNMAVRAARMI 181 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + ++GV HIGS I + F A + ++ ++ G I+ +++GGG GI Y Sbjct: 182 IDEEYLNLTGVHCHIGSDISSPKPFEIAATTMLEIVYNIKEMGVEIEALNLGGGFGINYL 241 Query: 246 SDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSAD 298 D +Y I + KII+EPGR+++ GI + + +IK+ Sbjct: 242 HDDPVFDVEEYVHTISKIIRKQCDILGIKIPKIIVEPGRYIIGPAGITLYSIGTIKEIPY 301 Query: 299 KTFVIL-DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 I D M D RP LY A + N + + G CET D + + + Sbjct: 302 LRKYISVDGGMADNPRPALYGAIYHAVI-ANKYNKEANELYTVSGKCCET-DMLIKDILL 359 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 PGD+L + TGAY + YN P +++ + ++ + T++ LI+ D +P Sbjct: 360 PQAAPGDILAVLNTGAYNYSMASHYNRLQSPPVVLLKDDKAELMVKKDTYENLIQNDVVP 419 Query: 418 AWLQ 421 +WL+ Sbjct: 420 SWLE 423 >gi|329667404|gb|AEB93352.1| Diaminopimelate decarboxylase [Lactobacillus johnsonii DPC 6026] Length = 434 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 116/420 (27%), Positives = 191/420 (45%), Gaps = 15/420 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L V KLA TP Y + I F F+ ++ V YA KA ++ A Sbjct: 13 GHLTIGGVDSLKLAKEYGTPLVVYDVSQIRNQIRAFKKVFEEEQVNYAVSYASKAFASIA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + D+VS GEL A+ A P ER+ F G K+ +E+++A+++ + +++ Sbjct: 73 MYQVANEEEAYTDVVSAGELYTAMKANFPMERVSFHGNNKSKEELEMAVKNHVGKIMIDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ LNQ + + R+ P I+A+TH+ TG+ + KFG + + A Sbjct: 133 FYEINLLNQVLEEQDSEINVMLRITPGISAHTHEYDQTGQVDSKFGFDLKSGQADKALQE 192 Query: 187 TLPGVKISG--VDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIA 243 L ++ + HIGSQI ++ F A L D+ R + + Q I+VGGG GI Sbjct: 193 VLKNQRMHMLGIHAHIGSQIFELNGFEMAAAKLVDVAASWRKNYDYTAQVINVGGGFGIK 252 Query: 244 YHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P ++ +I +EPGR +V G + KV S+K+ Sbjct: 253 YVQEDHPLKPEEFVKAIVKTIKDEATKHNFPLPEIDIEPGRSIVGPAGYNLYKVGSMKEI 312 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +V +D M D +RP LY A +E N + + G CE+GD +A + Sbjct: 313 PGLVPYVAVDGGMGDNIRPALYQAKYETVL-ANDPQRKASQEFHVAGKYCESGDILA-DA 370 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 K+ L + GD+L + TGAYG + YN + + ++ R + ++L+ LD Sbjct: 371 KLPLLKAGDILAMLDTGAYGYSMASNYNRNPRPAVVFAEDGKAQVVIRRESLEDLVHLDQ 430 >gi|134102735|ref|YP_001108396.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL 2338] gi|291007808|ref|ZP_06565781.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL 2338] gi|133915358|emb|CAM05471.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL 2338] Length = 472 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 118/428 (27%), Positives = 196/428 (45%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +GS V + LA TP + ++ AF G V YA KA V Sbjct: 47 DGSTGFAGVDVRDLAEEYGTPLFVLDEDDFRSRCADYAGAF-GDPASVHYASKAFLCTEV 105 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ S GEL AL A P ERI G K++ E+ A+++G+ ++S Sbjct: 106 ARWVAEEGLSLDVCSGGELNVALRAEFPPERITLHGNNKSVPELTAAVEAGVGSVVLDSF 165 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ L A G + + RV + A+TH+ I+T ++ KFG + + A Sbjct: 166 HEIARLEHIARERGVRQDVMIRVTVGVEAHTHEFIATAHEDQKFGFSLTSGQAAEAVGRV 225 Query: 188 LPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-----HNIQHIDVGGGL 240 L ++ G+ HIGSQI + F A + L +++ + +D+GGGL Sbjct: 226 LKAESLRLVGLHSHIGSQIFDDDGFELAAHRVIRLLAKMQEEHGAEALSTVSTVDLGGGL 285 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISI 293 GIAY ++ P ++ A+ +++ +I +EPGR + + V +V +I Sbjct: 286 GIAYTAEDDPLPPAELAARLNEIVRKECENAGLAAPRIAVEPGRAIAGPGTVTVYEVGTI 345 Query: 294 KKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 K A + +V +D M+D +R +LYDA ++ + A + + + IVG CE+G Sbjct: 346 KDVALDGGLQRRYVSVDGGMSDNIRTSLYDAVYDCRLVSRRA-EARAVLSRIVGKHCESG 404 Query: 349 DFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + + PGDL+ + TGAY V + YN + V Q ++ R T Sbjct: 405 DVVVRDCWLPEDIAPGDLVAVAATGAYCYVMASNYNRLPKPAVVAVRDGQARLLLRRETE 464 Query: 408 QELIELDS 415 +L+ L+ Sbjct: 465 DDLLRLEV 472 >gi|110802485|ref|YP_697889.1| diaminopimelate decarboxylase [Clostridium perfringens SM101] gi|110682986|gb|ABG86356.1| diaminopimelate decarboxylase [Clostridium perfringens SM101] Length = 431 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 122/427 (28%), Positives = 195/427 (45%), Gaps = 14/427 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALK 60 + K L+ V L+ TP Y + N + NA V YA K Sbjct: 6 SMKVEGNELYVGGVKASDLSKEYGTPLYVIDEELVRGNCRRYYNAMKCEERGNRVTYAGK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A N ++ + LD+VS GEL A A P ERI F G K+ EIDL ++ GI Sbjct: 66 AFINMSMCNLVNEENLYLDVVSGGELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIG 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F V++ EL+ LN A G+ + R+ P + A+TH+ I TG+ + KFG P+ Sbjct: 126 RFIVDNIHELEVLNSIAQEYGRVQKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTV 185 Query: 181 LY--AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD-LTQQLRSNGHNIQHIDVG 237 A L ++++G+ HIGSQI +E F +++ + + + G+ I+ +D+G Sbjct: 186 YDAIKRAMELEYIELNGLHCHIGSQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLG 245 Query: 238 GGLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG GI Y +P +Y A I + + +EPGR +V + G+ + V Sbjct: 246 GGFGIYYTEGDKPKEIEEYCSVIINKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTV 305 Query: 291 ISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 +IK+ + +D M+D +RP LY A +E N D + G CE+GD Sbjct: 306 GAIKEIPNIRKYVSVDGGMSDNIRPALYSANYESII-ANRVFDNSKEIVTVAGKCCESGD 364 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + ++ GD+L I TGAYG + YN + V+ ++ R T+++ Sbjct: 365 VLLNSIEMPRMETGDILAIISTGAYGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYED 424 Query: 410 LIELDSI 416 L+ + Sbjct: 425 LLRNECF 431 >gi|261208139|ref|ZP_05922814.1| diaminopimelate decarboxylase [Enterococcus faecium TC 6] gi|289566337|ref|ZP_06446766.1| diaminopimelate decarboxylase [Enterococcus faecium D344SRF] gi|294614568|ref|ZP_06694473.1| diaminopimelate decarboxylase [Enterococcus faecium E1636] gi|260077723|gb|EEW65439.1| diaminopimelate decarboxylase [Enterococcus faecium TC 6] gi|289161846|gb|EFD09717.1| diaminopimelate decarboxylase [Enterococcus faecium D344SRF] gi|291592549|gb|EFF24153.1| diaminopimelate decarboxylase [Enterococcus faecium E1636] Length = 419 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 106/413 (25%), Positives = 169/413 (40%), Gaps = 8/413 (1%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAV 67 L V+ LA +TP Y Y + + L+F F DT V YA KA + Sbjct: 3 ELIIGGVTASTLAEKYKTPLYVYDEEKMRQTMLSFKRGFVSKRFDTKVLYASKAFQTIEM 62 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G GLD+VS GE+ AL A P + I F G KT +E+ AL++ + ++ Sbjct: 63 LYLVREYGFGLDVVSGGEIYTALQADFPRDTIYFHGNNKTPEELIYALENDLLHIVADNL 122 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY--A 185 E++ L + + KK I R+N + A+TH+ I T + KFG+ A Sbjct: 123 MEVELLAELSQRYLKKICIMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLI 182 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 +++ G HIGSQI + ++ L + G Sbjct: 183 KESSYLELEGFHAHIGSQIFDVTAWLAEIDKLTNYLTDFDQPLSLNLGGGFGIRYTQNDQ 242 Query: 246 SDHRPPSSSDYASLIHQY---FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 + + ++++EPGR +V + G + + IKK+ K + Sbjct: 243 PIPVEEALKKLIEYTEEALEKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYY 302 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +D M D +RP LY A ++ + + I G +CE+GD + + Sbjct: 303 FVDGGMTDNIRPALYQAEYDCDLAAK-LSEEKTEKVTIAGKMCESGDVVIKEAYLPKAES 361 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GDLL + TGAYG S YN + VN Q +I R F +L+ + Sbjct: 362 GDLLAVYSTGAYGYSMSSNYNRATRPAVVFVNNGQSRLIVRRQAFSDLLRGEV 414 >gi|118587069|ref|ZP_01544499.1| lysine biosynthesis diaminopimelate decarboxylase [Oenococcus oeni ATCC BAA-1163] gi|118432479|gb|EAV39215.1| lysine biosynthesis diaminopimelate decarboxylase [Oenococcus oeni ATCC BAA-1163] Length = 427 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 104/420 (24%), Positives = 168/420 (40%), Gaps = 10/420 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 + L+ VS +++A TP Y Y I AFD ++ + YA KA Sbjct: 1 MQIKNNQLYIGGVSADQIAQQFGTPVYVYDVGQIRSIISDMKEAFDAEKLNYQISYASKA 60 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 S A+ L H D VS GE+ A P + + F+G K+ DE+ +A+ I Sbjct: 61 FSTVAIYDVLKHEIIHCDAVSGGEIATIAKAGFPMKNVSFNGNNKSADELRMAIDYKIGT 120 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V++ EL LN+ + R++P I+A+THK ISTG+++ KFG + + Sbjct: 121 IIVDNFHELDLLNEILSERKISQNVLMRISPGISAHTHKFISTGQQDSKFGFDLASGQAK 180 Query: 182 YAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ + + G+ HIGSQI + + K LL + I G Sbjct: 181 KAFDKIQASEYLNLLGLHAHIGSQIFESSGYSKLVDLLIKTASKWHFQAEIIDVGGGFGI 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQC----KIILEPGRFLVADVGILVTKVISIKK 295 + +I +EPGR +V G + + K Sbjct: 241 KYTDADDPIPNAEFIHLICQTAKASSRKYHAKLPEIWVEPGRSIVGPAGYSLYTIGGRKD 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A ++ + + I G CE+GD + Sbjct: 301 IPGIRSYLSVDGGMGDNIRPALYQAEYKAVLVDQVDLPSEQV-VRIAGKYCESGDVLIQK 359 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 +++ PGDLL + TGAYG + YN + + ++ R T++++ LD Sbjct: 360 QELPKTYPGDLLAVLATGAYGYSMASNYNRNPRPAVVFAEKGKAKLVVKRETYEDITHLD 419 >gi|157413561|ref|YP_001484427.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9215] gi|157388136|gb|ABV50841.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9215] Length = 455 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 127/427 (29%), Positives = 207/427 (48%), Gaps = 12/427 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANS 63 +G L S+E+L +P Y + + K+ + A + +++ YA KANS Sbjct: 30 EDGKLSVGGCSIEELVKKYDSPLYILDESTLRKSCRAYKKALEKYYPGESLPIYASKANS 89 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 + + ++ G GLD VSEGEL AL VP E+IVF G K+ EID A++ Sbjct: 90 SIFMSNLVSSEGLGLDAVSEGELLTALKGGVPNEKIVFHGNNKSDKEIDFAIR-NNIKII 148 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 V+++ +LK L + L I R P I +TH+ I TG + KFG I +++L+A Sbjct: 149 VDNDYDLKRLEGISNLLNHDLEIMIRFTPGIECHTHEYIKTGSFDSKFGFGIENLNNLFA 208 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 S + + G+ HIGSQI +++ +++ ++ + GHNI+ ++VGGGLGI Sbjct: 209 SISETKHLNLKGIHAHIGSQIFELDPHKDLGEIMVNVILDAKKFGHNIRELNVGGGLGIK 268 Query: 244 YHSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + PPS ++ I + ++ EPGR +V+ GI + K+ + K+ Sbjct: 269 YTQNDDPPSIDEWVKTISASVVEACKKHNLDLPILMCEPGRSIVSTAGITIYKIGAFKEI 328 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +T+ +D M+D RP Y + + + NP I G CE+GD + + Sbjct: 329 PGIRTYFSVDGGMSDNPRPITYQSNYSACLVKNPFNINSKNKYTIAGKHCESGDVLFRDI 388 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++A + GDL+ + TGAY S YN I+V + II+ R +L+ D Sbjct: 389 ELANCKTGDLICVFGTGAYNNSMSSNYNRIPRPAAILVCDGEAEIIQKRERPFDLLRYDV 448 Query: 416 IPAWLQK 422 +P K Sbjct: 449 LPDRFIK 455 >gi|315641453|ref|ZP_07896525.1| diaminopimelate decarboxylase [Enterococcus italicus DSM 15952] gi|315482741|gb|EFU73265.1| diaminopimelate decarboxylase [Enterococcus italicus DSM 15952] Length = 430 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 122/431 (28%), Positives = 200/431 (46%), Gaps = 14/431 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKA 61 + L + +LA TP Y +S + IE+ F V YA KA Sbjct: 1 MSEVKNHLLWDGCDTVELAKTYGTPLYVFSESMIEQACRELQRDFIQKYERVRVAYASKA 60 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + A++K + G LD+VS GEL A+AA E+I F+G K++ E++ AL G+ Sbjct: 61 FNVLAMLKLVEKEGLCLDVVSGGELYTAIAADFEPEKIEFNGNNKSVAELEEALDYGVGR 120 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F ++S EL + + A + FR+ P+I TH+ ISTG+K+ KFGIP+ + Sbjct: 121 FIIDSMQELDLIQHICREKKQTAKVLFRITPEITVQTHRYISTGQKDSKFGIPLDEKVLF 180 Query: 182 Y--AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGG 238 A P + G+ HIGSQ+ ++ A + +L +Q++ + ++ ++ GG Sbjct: 181 PLIKQAIDAPEIDFYGIHFHIGSQLADNQTHLAAANVALNLVKQIKERFDYEVKELNYGG 240 Query: 239 GLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 G G+ Y + + + + I++EPGR +VA+ GI + + Sbjct: 241 GFGVRYTKADVRQPYAYFLDPLMEATITFCEEHQLYRPTIVIEPGRSIVAEAGITLHTIG 300 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 SIK+ +D M D +RP LY A +E I N D+ I G ICE+ D Sbjct: 301 SIKQLPGIRTYASIDGGMTDNIRPGLYQAQYE-VAIANKQTDQDLEPVTISGKICESTDI 359 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + + GD+L TGAYG + YN + I V + + R ++Q++ Sbjct: 360 LVKDALLPKVATGDILATYTTGAYGYSMASNYNKIAIPAVIFVKEGRAEEVVKRQSYQQM 419 Query: 411 IELDSIPAWLQ 421 I+ + IP L+ Sbjct: 420 IQNEVIPTHLR 430 >gi|315638230|ref|ZP_07893412.1| diaminopimelate decarboxylase [Campylobacter upsaliensis JV21] gi|315481766|gb|EFU72388.1| diaminopimelate decarboxylase [Campylobacter upsaliensis JV21] Length = 408 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 160/407 (39%), Positives = 229/407 (56%), Gaps = 6/407 (1%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 V KL +TPFY Y I+ +L NAF + + YA+KANSN ++++ LA L Sbjct: 7 VDYVKLKEEFKTPFYLYDFDLIKSRFLQLKNAFKARKSQIFYAMKANSNLSLLQMLARLD 66 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG D VS GE++RAL V +I+FSGVGK+ +E++ AL+ I N+ESE E+ L Sbjct: 67 SGFDCVSIGEVKRALRVGVKPYKIIFSGVGKSEEELEQALKFDILYINLESEEEMLLLEN 126 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A LG KA I+ RVNP+++A TH ISTG E+KFG+ + +Y YA+ ++ G Sbjct: 127 VAKRLGLKARISIRVNPNVDAKTHPYISTGLNENKFGVELEVARKMYLYAAKSEFLEPVG 186 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGSQ+ I H A ++ L ++L++ ++ DVGG + P Sbjct: 187 VHFHIGSQLLDISPIHDAALIVAKLLRELKALKIELKFFDVGG-GLGVGYEGEEEPCLYH 245 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 YA I L I LEPGRFLVA G+LV V+ K + K F+I+D AMND +RP+ Sbjct: 246 YAQGILANLSGLDVTIGLEPGRFLVAKSGVLVCSVLYEKITPKKRFMIVDAAMNDLIRPS 305 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LYDAYHEI D+VG ICE+GDF A +R++ + GD++ I++ GAYG Sbjct: 306 LYDAYHEIVLPY---TKGEVSPCDVVGGICESGDFFAKDRRLTKSKSGDIVLIKEAGAYG 362 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQK 422 S YN+R I E+ + ++R R F++LI L+ +L+ Sbjct: 363 FSMSSNYNTRPRICELALENGAVKMVRKREKFEDLIALEE--EFLEN 407 >gi|110639661|ref|YP_679871.1| diaminopimelate decarboxylase [Cytophaga hutchinsonii ATCC 33406] gi|110282342|gb|ABG60528.1| diaminopimelate decarboxylase [Cytophaga hutchinsonii ATCC 33406] Length = 410 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 114/418 (27%), Positives = 189/418 (45%), Gaps = 18/418 (4%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 + + + VSL +LA TP Y Y++ I Y +AF G++ + YA KA + Sbjct: 1 MQVTNRTYEFQGVSLTELATEYGTPLYVYNSEKILSQYKRLHDAFSGVNVRIKYAAKALT 60 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 NQA++K L G+G+D+VS EL+ AL A + I+F+ EI+ A+ G+ Sbjct: 61 NQAILKLLKGAGAGVDVVSIQELQLALKAGFDKKDIMFTPNCVDFSEIEEAVGYGVQINI 120 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 L Q G P R+NP I+A + KI TG K KFGI I Q++ +Y Sbjct: 121 DNIPF----LKQFGQVYGSSVPCCVRINPHIDAGGNVKIMTGHKGSKFGISIEQVNEIYE 176 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + + + AF ++ + + +D G G ++ Sbjct: 177 VVD-----EYEILVNGVHVHSGSDFKSADAFVRAAEVVYSVAMQFDKLTFLDFGSGFKVS 231 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSA 297 Y + + F EPG+FLV++ G+L+ IK++ Sbjct: 232 YKEGDYVTDIEELGKKMTDSFNAFCLNYGKKLDIWFEPGKFLVSESGMLLVTCTVIKETP 291 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 F+ ++ +N +RP +Y ++H+I + NP GD+ +VG ICET D + I Sbjct: 292 ACNFIGVNSGLNHLIRPMMYGSHHDIVNVSNPDGDKKM--YTVVGYICET-DTFGSDLFI 348 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GD++ ++ GAYG S YNSR E++V+ + +IR R T ++L++ Sbjct: 349 EETKAGDIIGLKNAGAYGFSMSSNYNSRFRPAEVLVHKGKHQLIRKRETMEDLLKNQI 406 >gi|300173043|ref|YP_003772209.1| diaminopimelate decarboxylase [Leuconostoc gasicomitatum LMG 18811] gi|299887422|emb|CBL91390.1| diaminopimelate decarboxylase [Leuconostoc gasicomitatum LMG 18811] Length = 431 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 120/425 (28%), Positives = 185/425 (43%), Gaps = 14/425 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYA 58 MS L V LA TP Y Y T I + F F+ + +V YA Sbjct: 1 MSYPINTAQHLTIGEVDAIDLAKTYGTPLYVYDVTKIRQTMRDFKAIFEKEDVPYVVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA +++A+ + G DIVS GEL ALAA + + F+G K+ DE+ +A+ G Sbjct: 61 SKAFASKAIYQVAQQEGIHADIVSGGELYTALAAGFDPKHLSFNGNNKSWDELTMAVTEG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL+ L++ G K I R++P I+A+TH+ ISTG+++ KFG + Sbjct: 121 VGTIIVDNFLELQLLSEITTQNGVKQDILLRISPGISAHTHEFISTGQQDSKFGFDLLTG 180 Query: 179 HSLYAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + AY A + G+ HIGSQI + F K L + +S G + I+V Sbjct: 181 QAKTAYDIARQNENFNLRGLHAHIGSQIFDVTGFE---KNAALLAETAKSWGFQPEVINV 237 Query: 237 GGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 GGG GI Y S+ P S+YA + +I +EPGR +V G + Sbjct: 238 GGGFGIRYTSEDEPLPESEYADAIIRTLKSKAAEYDWKMPEIWIEPGRSIVGPAGQTLYT 297 Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + S K D + + + N + G CE+GD Sbjct: 298 IGSRKDIPDLRHYLAVDGGMGDNIRPALYQANYDAILANNPNASTQEVVRVAGKYCESGD 357 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + + +PGD+L + TGAYG + YN + V + ++ R ++ Sbjct: 358 VLVWQQALPKTKPGDILSVLATGAYGYAMASNYNRNPRPAVVFVENGKHQVVIARESYAH 417 Query: 410 LIELD 414 LI LD Sbjct: 418 LIALD 422 >gi|330718569|ref|ZP_08313169.1| diaminopimelate decarboxylase [Leuconostoc fallax KCTC 3537] Length = 435 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 122/422 (28%), Positives = 188/422 (44%), Gaps = 14/422 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 E L +LA TP Y + I F F + V YA KA S Sbjct: 12 QENHLLIGGADATQLAQQFGTPLVAYDVSKIRSQIKAFKRVFEEKQVPYAVSYASKAFSA 71 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + + +A G D+VS GEL AL A P E I F+G K+ DE+ +A+ +GI V Sbjct: 72 IGMYEVVAQEGGHTDVVSGGELYTALQANFPVEDISFNGNNKSYDELVMAIDAGIGAIIV 131 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E+ + Q + + R+ P I+A+TH+ ISTG+++ KFG + + A+ Sbjct: 132 DNFHEIDLIEQILSTRSTSVNVLLRITPGISAHTHEFISTGQEDSKFGFDLKSGQARVAF 191 Query: 185 ASTLPGVKISG--VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLG 241 + KI+ V HIGSQI + F A + L D+ R + + ++ I+VGGG G Sbjct: 192 ERVMKNSKINMRGVHAHIGSQIFDVHGFVAAAEKLVDIVADWRESFGYEVEVINVGGGFG 251 Query: 242 IAYHSDHRPPSSSDYASLIHQYF-------GNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y D P + + + I +I +EPGR +V G + + S K Sbjct: 252 IRYTKDDTPIPAESFVAAIIDAVKAKTEALNMKMPEIWIEPGRSVVGPAGYSLYTIGSRK 311 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 +D M D +RP LY A +E N + I G CE+GD + Sbjct: 312 DIPGINAYLAVDGGMGDNIRPALYQAEYEALLASNVNAKSEEV-VRIAGKYCESGDILVW 370 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + +PGD++ I TGAYG + YN + V Q ++ R ++ +L+ L Sbjct: 371 QQALPQTKPGDVIAILATGAYGYAMASNYNRNPKPAVVFVEDGQAKLVIARESYDDLVHL 430 Query: 414 DS 415 D Sbjct: 431 DR 432 >gi|227890997|ref|ZP_04008802.1| diaminopimelate decarboxylase [Lactobacillus salivarius ATCC 11741] gi|227867406|gb|EEJ74827.1| diaminopimelate decarboxylase [Lactobacillus salivarius ATCC 11741] Length = 430 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 124/422 (29%), Positives = 193/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVC--YALKANSNQ 65 EG + +LA TP Y I++ F F+ + YA KA S+ Sbjct: 10 EGHYTIGGLDSLELAKKFGTPTIVYDVAKIKEQIAKFKAGFEEENVKYHISYASKAFSSL 69 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ +A G G D+VS GEL AL + + + F G K+ E+++A+ S + V+ Sbjct: 70 AMYDLVAKSGIGSDVVSGGELYAALKGGMDPQELEFHGNNKSRAELEMAVDSNVGYIIVD 129 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + E+ LN+ K A I R+ P I+A TH+ ISTG+ + KFG + + A Sbjct: 130 NFYEIDLLNEVLTEKNKTANILLRLAPGIHAETHEYISTGQAKSKFGFDLQSGQASEALE 189 Query: 186 STL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGI 242 TL P K+ GV HIGSQI F +A K L D R + +++GGG GI Sbjct: 190 KTLANPRFKVLGVHSHIGSQIFATAGFVEAAKKLMDFLSAWREKYNFTAEVLNLGGGFGI 249 Query: 243 AYHSDHRPPSSSDYASLIHQYF-------GNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P D+ +I + I +EPGR +V + G+ + V S K Sbjct: 250 RYTDQDEPLDVKDFVKIIVEAVKEKSKELDYPMPAIWIEPGRSVVGEAGVSLYTVGSRKD 309 Query: 296 SADK-TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 D +FV +D M D +RP LY A ++ + +A IVG CE+GD + + Sbjct: 310 VEDVGSFVAVDGGMGDNIRPALYGAEYDAVL-AKDPNAPIAQNASIVGKFCESGDILIKD 368 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 PGD++ + TGAYG V + YN + V + ++ R +++++I + Sbjct: 369 YDFPKTEPGDVIAMLSTGAYGYVMASNYNRNPRPAIVFVEDGKARLVVKRESYEDMIRNE 428 Query: 415 SI 416 + Sbjct: 429 IL 430 >gi|159903637|ref|YP_001550981.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9211] gi|159888813|gb|ABX09027.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9211] Length = 455 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 114/422 (27%), Positives = 195/422 (46%), Gaps = 13/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 + L LA+ TP Y +I + + A D+ V YA KANS+ Sbjct: 31 DRMTVGGCLLSDLANQYGTPLYVIDEASIRSSCRAYRKALKQSYPGDSFVLYASKANSSL 90 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G G+D+VSEGEL AL + V E+IV G K+ E+ LA +S ++ Sbjct: 91 AIDRIVASEGLGIDVVSEGELITALKSGVAGEQIVLHGNNKSDKELLLAHESNATII-ID 149 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 ++ +++ L++ + R P I +TH+ I TG + KFG Q+ +A Sbjct: 150 NQHDIQRLDKLISHKEGSVRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPEQVSDTFAQL 209 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 K+ G+ HIGSQI ++ +++ D + + GH I+ +++GGGLG+ Y Sbjct: 210 KDYKWAKLVGLHAHIGSQIFELSPHMDLVEVMADFFLRAKDLGHPIKDLNIGGGLGVKYI 269 Query: 246 SDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKK-SA 297 PP + + ++I EPGR ++A G+ + ++ + K Sbjct: 270 PSDDPPDIYSWVETVSNAVIKAFDTRNIELPRLICEPGRSIIATAGLTLYRIGARKDIPG 329 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 KT++ +D M+D RP Y + + + P + + I G CE+GD + N + Sbjct: 330 GKTYLSIDGGMSDNPRPITYQSTYTACLVDRPLANTDQV-VTIAGKHCESGDILLNNIAL 388 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 GD+L + TGAY S YN ++VN +Q +++ R ++L+ D +P Sbjct: 389 PTASSGDVLGVFGTGAYNLSMSSNYNRIPRPASVLVNNAQSDLVQVRELPEDLLRYDRLP 448 Query: 418 AW 419 Sbjct: 449 DR 450 >gi|284051896|ref|ZP_06382106.1| diaminopimelate decarboxylase [Arthrospira platensis str. Paraca] gi|291567171|dbj|BAI89443.1| diaminopimelate decarboxylase [Arthrospira platensis NIES-39] Length = 463 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 114/430 (26%), Positives = 185/430 (43%), Gaps = 14/430 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 + L + ++ +P Y + + A++ ++++ YA KA + Sbjct: 35 QDHLEIGGCDVAEMVSQFGSPLYILDEVTVRTACRQYREAWEKYYPGESLILYASKAWNC 94 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 AV +A G G D+VS GEL A A V ++I G K+ E++LA+ +G Sbjct: 95 LAVCAIVASEGLGTDVVSGGELYTANMAGVSPDKIYLHGNNKSRSELELAISTGCTVVAD 154 Query: 125 ESESELKTLN-QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 + +S+ + R P I +TH+ I TG + KFG +Q+ ++ Sbjct: 155 NWLDLTNLVELADQMSVTSPVRVMIRFTPGIECHTHEYIRTGHLDSKFGFDPNQLDEVFK 214 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + S+ P + G+ HIGSQI +++ +L D + G NI ++VGGGLGI Sbjct: 215 FVSSNPSLCCEGIHAHIGSQIFELQPHQDLAGVLMDAVTKGSQYGLNITEVNVGGGLGIR 274 Query: 244 YHSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D PPS + S I + K++ EPGR ++ I + S K+ Sbjct: 275 YTEDDDPPSIESWVSAIASSVVAACEQRQIPLPKLLCEPGRSIIGPAAITAYTIGSRKEI 334 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 D I +D M+D RP Y + + + N L + G CE+GD + Sbjct: 335 PDMRTYIAVDGGMSDNPRPITYQSVYRVVI-ANRMSAPLTETITVAGKHCESGDILIQQA 393 Query: 356 KIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + + GD+L + TGAY + YN ++VN II R T+ +LI D Sbjct: 394 HLPGDCQTGDILVVMATGAYNYSMASNYNRLPRPAAVLVNEGISTIIIQRETYSDLIRQD 453 Query: 415 SIPAWLQKTP 424 +P L P Sbjct: 454 RLPERLGDRP 463 >gi|260101761|ref|ZP_05751998.1| diaminopimelate decarboxylase [Lactobacillus helveticus DSM 20075] gi|157272210|gb|ABV26736.1| diaminopimelate decarboxylase [Lactobacillus helveticus CNRZ32] gi|260084432|gb|EEW68552.1| diaminopimelate decarboxylase [Lactobacillus helveticus DSM 20075] gi|328468047|gb|EGF39055.1| diaminopimelate decarboxylase [Lactobacillus helveticus MTCC 5463] Length = 438 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 121/420 (28%), Positives = 191/420 (45%), Gaps = 14/420 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQA 66 G L V +LA TP Y I F F+ + V YA KA + A Sbjct: 14 GHLTIGGVDTVELAKKYGTPLVVYDVEQIRHQIRAFKKVFEEENVKYAVSYASKAFACIA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + A G+ D+VS+GEL AL A P ++I F G K+ E+++A+++ I +++ Sbjct: 74 MYQVAAAEGAYTDVVSDGELYTALKANFPVKKISFHGNNKSKSELEMAVKNHIGKIIIDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+K L+Q K + R+ P I+A+TH+ TG+ ++KFG + + A Sbjct: 134 FHEIKLLDQVLRKHDAKIDVMLRITPGISAHTHEYDQTGQVDNKFGFDLESGQADLALEQ 193 Query: 187 TLPG--VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIA 243 L + + G+ HIGSQI ++ F A K L ++ + R G+ Q I+VGGG GI Sbjct: 194 VLANSRMNMIGIHAHIGSQIFELNGFEMAAKKLMEVAENWRSQYGYTAQVINVGGGFGIK 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIIL-------EPGRFLVADVGILVTKVISIKKS 296 Y ++ P ++ I + EPGR +V G + S K Sbjct: 254 YTAEDNPLRPEEFVRAIVKTIKKEAKNAAFPLPEIDIEPGRSIVGPAGYNLYITGSRKIV 313 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D +RP LYDA +E +P D L H I G CE+GD +A ++ Sbjct: 314 PGHCPYVTVDGGMGDNIRPALYDAKYETVLATDPRAD-LTEHVRIAGKYCESGDILADDQ 372 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + G LL + TGAYG + YN + + ++ R + ++L+ LD Sbjct: 373 ALPATKSGSLLAMLDTGAYGYSMASNYNRNARPAVVFAENGKAQLVIKRESLEDLVHLDQ 432 >gi|300214689|gb|ADJ79105.1| Diaminopimelate decarboxylase [Lactobacillus salivarius CECT 5713] Length = 430 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 123/422 (29%), Positives = 192/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVC--YALKANSNQ 65 EG + +LA TP Y I++ F F+ + YA KA S+ Sbjct: 10 EGHYTIGGLDSLELAKEFGTPTIVYDVAKIKEQIAKFKAGFEEENVKYHISYASKAFSSL 69 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ +A G G D+VS GEL AL + + + F G K+ E+++A+ S I V+ Sbjct: 70 AMYDLVAKSGIGSDVVSGGELYAALKGGMDPQELEFHGNNKSRAELEMAVDSNIGYIIVD 129 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + E+ LN+ K A I R+ P I+A TH+ ISTG+ + KFG + + A Sbjct: 130 NFYEIDLLNEVLTEKNKTADILLRLAPGIHAETHEYISTGQAKSKFGFDLQSGQASEALE 189 Query: 186 STL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGGGLGI 242 TL P K+ GV HIGSQI F +A K L D + + +++GGG GI Sbjct: 190 KTLANPRFKVLGVHSHIGSQIFATTGFVEAAKKLMDFLSAWKEKYDFTAEVLNLGGGFGI 249 Query: 243 AYHSDHRPPSSSDYASLIHQYF-------GNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P D+ +I + I +EPGR +V + G+ + V S K Sbjct: 250 RYTDQDEPLDVKDFVKIIVEAVKEKSKELNYPIPAIWIEPGRSVVGEAGVSLYTVGSRKD 309 Query: 296 SADK-TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +FV +D M D +RP LY A ++ + +A IVG CE+GD + + Sbjct: 310 VEGVGSFVAVDGGMGDNIRPALYGAEYDAVL-AKDPNAPIAQNASIVGKFCESGDILIKD 368 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 PGD++ + TGAYG V + YN + V + ++ R +++++I + Sbjct: 369 YDFPKTEPGDVIAMLSTGAYGYVMASNYNRNPRPAIVFVEDGKARLVVKRESYEDMIRNE 428 Query: 415 SI 416 + Sbjct: 429 IL 430 >gi|78213154|ref|YP_381933.1| diaminopimelate decarboxylase [Synechococcus sp. CC9605] gi|78197613|gb|ABB35378.1| diaminopimelate decarboxylase [Synechococcus sp. CC9605] Length = 459 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 111/422 (26%), Positives = 186/422 (44%), Gaps = 13/422 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 L L LA TP Y + + A + ++ YA KANS+ Sbjct: 35 DRLVVGGCRLSDLAERYCTPLYVLDEATVRATCRAYREALNKHYAGPSLPIYASKANSSL 94 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + A G GLD VS GEL AL +P +R+V G K+ +E+ L + V+ Sbjct: 95 VMSSLAASEGLGLDAVSAGELLTALRGGMPGDRMVLHGNNKSDEEL-LLAYANKVTIVVD 153 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 ++ +L L + + + A + R P I +TH+ I TG + KFG Q+ + Sbjct: 154 NQHDLDRLAELVPAGSEPARLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQVEPVLRSL 213 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 P +++G+ HIGSQI ++E ++ D + R GH + ++VGGGLGI Y Sbjct: 214 VGQPWAQLTGLHAHIGSQIFELEPHRDLAAVMADKLKLARDLGHPVTDLNVGGGLGIRYV 273 Query: 246 SDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSAD 298 PPS + ++ + + + + EPGR LVA G+ + V S K + Sbjct: 274 ESDDPPSIEQWIKVVAEAVTSACQERGLELPRLMCEPGRSLVATAGVTLYSVGSRKTIPN 333 Query: 299 KTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + +D M+D RP Y + + + + + ++VG CE+GD + + + Sbjct: 334 VRTYVAIDGGMSDNPRPITYQSLYTC-CLADRPLAKPDESVNLVGKHCESGDVLLKDLSL 392 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 GD++ + TGAY A S YN ++V+ +++ R +L+ D +P Sbjct: 393 PTTESGDIVAVFATGAYNASMSSNYNRIPRPAAVLVHDGSAELVQKREQPDDLLRYDVLP 452 Query: 418 AW 419 Sbjct: 453 ER 454 >gi|148270405|ref|YP_001244865.1| diaminopimelate decarboxylase [Thermotoga petrophila RKU-1] gi|281412712|ref|YP_003346791.1| diaminopimelate decarboxylase [Thermotoga naphthophila RKU-10] gi|147735949|gb|ABQ47289.1| diaminopimelate decarboxylase [Thermotoga petrophila RKU-1] gi|281373815|gb|ADA67377.1| diaminopimelate decarboxylase [Thermotoga naphthophila RKU-10] Length = 386 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 131/394 (33%), Positives = 217/394 (55%), Gaps = 18/394 (4%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 K+A + TP Y Y + K F+G++ + +A+KAN+N +++ L G G+D Sbjct: 6 KVAEIHGTPAYVYFEETLRKRARLVKEVFEGVNLLPTFAVKANNNPVLLRILREEGFGMD 65 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 +V++GEL A A VP+ +V++G GK++D++ L+ G+ NV+S E++ + Sbjct: 66 VVTKGELFAAKLAGVPSHSVVWNGNGKSVDQMKHFLREGVRIINVDSFEEMEIWKELNPE 125 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + RVNP+++A TH ISTG K+ KFGIP+ + + + G+ +H Sbjct: 126 GVEYF---IRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDLFMER---FGSMNVKGLHVH 179 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 IGSQI Q+E F +AF + +++ + I++GGG GI Y + SS Sbjct: 180 IGSQITQVEPFVEAFDKVVRASER-----FGFEEINIGGGWGINYSGEELDLSSYR---E 231 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 ++I+E GR++VA G L+ +V+ +KK ++KTFV++D MN +RP LY A Sbjct: 232 KVVPALKRFKRVIVEIGRYIVAPSGYLLLRVVLVKKRSNKTFVVVDGGMNTLIRPALYSA 291 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 YH + + + AD+VGP+CE+GD IA +R++ PGD++ +E GAYG S Sbjct: 292 YHRVFVLGKQ---GKEVRADVVGPLCESGDVIAYDRELPEVEPGDIIVVENAGAYGYTMS 348 Query: 380 GTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 YNS + E++V G + +IR R T ++ + Sbjct: 349 NNYNSTVRPAEVLVGEGGEISLIRRRETEMDIFK 382 >gi|116490819|ref|YP_810363.1| diaminopimelate decarboxylase [Oenococcus oeni PSU-1] gi|290890264|ref|ZP_06553343.1| hypothetical protein AWRIB429_0733 [Oenococcus oeni AWRIB429] gi|116091544|gb|ABJ56698.1| diaminopimelate decarboxylase [Oenococcus oeni PSU-1] gi|290480050|gb|EFD88695.1| hypothetical protein AWRIB429_0733 [Oenococcus oeni AWRIB429] Length = 427 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 104/420 (24%), Positives = 168/420 (40%), Gaps = 10/420 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 + L+ VS +++A TP Y Y I AFD ++ + YA KA Sbjct: 1 MQIKNNQLYIGGVSADQIAQQFGTPVYVYDVGQIRSIISDMKEAFDAEKLNYQISYASKA 60 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 S A+ L H D VS GE+ A P + + F+G K+ DE+ +A+ I Sbjct: 61 FSTVAIYDVLKHEIIHCDAVSGGEIATIAKAGFPMKNVSFNGNNKSADELMMAIDYKIGT 120 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V++ EL LN+ + R++P I+A+THK ISTG+++ KFG + + Sbjct: 121 IIVDNFHELDLLNEILSERKISQNVLMRISPGISAHTHKFISTGQQDSKFGFDLASGQAK 180 Query: 182 YAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ + + G+ HIGSQI + + K LL + I G Sbjct: 181 KAFDKIQASEYLNLLGLHAHIGSQIFESSGYSKLVDLLIKTASKWHFQAEIIDVGGGFGI 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQC----KIILEPGRFLVADVGILVTKVISIKK 295 + +I +EPGR +V G + + K Sbjct: 241 KYTDADDPIPNAEFIHLICQTAKASSRKYHAKLPEIWVEPGRSIVGPAGYSLYTIGGRKD 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +RP LY A ++ + + I G CE+GD + Sbjct: 301 IPGIRSYLSVDGGMGDNIRPALYQAEYKAVLVDQVDLPSEQV-VRIAGKYCESGDVLIQK 359 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 +++ PGDLL + TGAYG + YN + + ++ R T++++ LD Sbjct: 360 QELPKTYPGDLLAVLATGAYGYSMASNYNRNPRPAVVFAEKGKAKLVVKRETYEDITHLD 419 >gi|191636924|ref|YP_001986090.1| Diaminopimelate decarboxylase [Lactobacillus casei BL23] gi|190711226|emb|CAQ65232.1| Diaminopimelate decarboxylase [Lactobacillus casei BL23] gi|327380949|gb|AEA52425.1| Diaminopimelate decarboxylase [Lactobacillus casei LC2W] gi|327384125|gb|AEA55599.1| Diaminopimelate decarboxylase [Lactobacillus casei BD-II] Length = 448 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 113/426 (26%), Positives = 172/426 (40%), Gaps = 12/426 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYA 58 M EG L V+ +LA QTP Y Y AI + F F+ D V YA Sbjct: 1 MDFATNHEGQLTIGGVAASQLARTFQTPLYVYDVGAICQQIRAFKRVFEEADVSYAVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + A+ + G+ +D+VS GEL A AA P + F G K+ E+ AL +G Sbjct: 61 SKAFATIAMYEVAKSEGAHVDVVSGGELYTAQAADFPMAAVSFHGNNKSKAELTQALDAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL L+ + + + RV P I+A+TH TG+ + KFG + Sbjct: 121 VGTIIVDNFHELDLLDDLLGATVGQQDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASG 180 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHID 235 + A L + + G+ HIGSQI ++ F + L + + G + ++ Sbjct: 181 QADEAAKRILADDHLNLLGIHAHIGSQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLN 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVT 288 VGGG GIAY P + Q I +EPGR +V G + Sbjct: 241 VGGGFGIAYTKQDDPLPPEAFVKAILATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLY 300 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V S K + + + H +VG CE+G Sbjct: 301 TVGSRKDVPGLRPYVAVDGGMGDNIRPALYQATYTAVLADQPNAAPAEHVHLVGKYCESG 360 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + PGD++ + TGAYG + YN + V Q ++ R T Sbjct: 361 DILIDDAPLPTTTPGDVVVVFDTGAYGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDA 420 Query: 409 ELIELD 414 +LI+ D Sbjct: 421 DLIKND 426 >gi|209526840|ref|ZP_03275360.1| diaminopimelate decarboxylase [Arthrospira maxima CS-328] gi|209492711|gb|EDZ93046.1| diaminopimelate decarboxylase [Arthrospira maxima CS-328] Length = 463 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 114/430 (26%), Positives = 188/430 (43%), Gaps = 14/430 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 + L + ++ +P Y + + A+ ++++ YA KA + Sbjct: 35 QDHLEIGGCDVAEMVSQFGSPLYILDEVTLRTACRQYREAWAKYYPGESLILYASKAWNC 94 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ +A G G D+VS GEL A A V ++I G K+ E++LA+ +G Sbjct: 95 LAICAIVASEGLGTDVVSGGELYTAKTAGVSPDKIYLHGNNKSRSELELAISTGCTVVAD 154 Query: 125 ESESELKTLN-QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 + +S+ + R P I +TH+ I TG + KFG +Q+ ++ Sbjct: 155 NWLDLTNLVELADEMSVQSPVRVMIRFTPGIECHTHEYIRTGHLDSKFGFDPNQLDEVFK 214 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + S+ P + G+ HIGSQI +++ +L D + G NI ++VGGGLGI Sbjct: 215 FVSSNPSLCCEGIHAHIGSQIFELQPHQDLAGVLMDAVTKGSQYGLNITEVNVGGGLGIR 274 Query: 244 YHSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D PPS + S I + K++ EPGR ++ I + S K+ Sbjct: 275 YTEDDDPPSIESWVSAIASSVVAACEQRQIPLPKLLCEPGRSIIGPAAITAYTIGSRKEI 334 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 D +T++ +D M+D RP Y + + + N L + G CE+GD + Sbjct: 335 PDLRTYIAVDGGMSDNPRPITYQSVYRVVI-ANRMSAPLTETITVAGKHCESGDILIQQA 393 Query: 356 KIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + + GD+L + TGAY + YN ++VN S II R T+ +LI D Sbjct: 394 HLPGDCQTGDILVVMATGAYNYSMASNYNRLPRPAAVLVNDSLSSIIIQRETYSDLIRQD 453 Query: 415 SIPAWLQKTP 424 +P L P Sbjct: 454 RLPERLGDRP 463 >gi|326777094|ref|ZP_08236359.1| diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1] gi|326657427|gb|EGE42273.1| diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1] Length = 444 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 125/418 (29%), Positives = 196/418 (46%), Gaps = 15/418 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L V+L LA TP Y + T+ AF D V YA KA ++A+ Sbjct: 29 GDLSVGGVALAGLAGRFGTPVYVLDEDEVRSRCRTYRAAFP--DARVLYAAKAFLSRAMA 86 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G GLD+ S GEL A AA P ER+V G KT +I+ AL+ G+ V+S S Sbjct: 87 RWIDEEGLGLDVCSVGELELAHAAGFPPERMVLHGNAKTPHDIETALRLGVGRIVVDSPS 146 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E+ + G++ + RV P ++A H+KI TG KFG+ + + +A A L Sbjct: 147 EIARIAALTGPGGRQ-KVMVRVVPGVSAGGHEKIRTGTDGQKFGLSLTDGSAQHAIARVL 205 Query: 189 --PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYH 245 P ++++G+ HIGSQI + + A + L L +++ N +D+GGG G+A+ Sbjct: 206 GQPQLELTGLHCHIGSQITDAKPYAVAVRRLVGLMARIKDNHGVTFPELDLGGGHGVAHR 265 Query: 246 SDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + A G + ++EPGR +VA G+ + +V+++K + Sbjct: 266 PGDPALDLTALARRLGAELATSCAAAGLPVPRTVIEPGRAIVAPAGVALYRVLAVKHTGP 325 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 FV +D M+D RP LY A + I + A +VG CE GD +A + + Sbjct: 326 NLFVAVDGGMSDNPRPALYGARYAPRLIGRSTTAGP-VAATVVGRHCEAGDVLANDVLLP 384 Query: 359 -LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 R GDLL + GAY + +YN P + V+ ++ R T ++L D Sbjct: 385 GDIRSGDLLAVPVAGAYQVSMASSYNLVGRPPVVAVHDGTARLLIRRETQEDLRRRDV 442 >gi|182436473|ref|YP_001824192.1| putative diaminopimelate decarboxylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464989|dbj|BAG19509.1| putative diaminopimelate decarboxylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 458 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 125/418 (29%), Positives = 196/418 (46%), Gaps = 15/418 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L V+L LA TP Y + T+ AF D V YA KA ++A+ Sbjct: 43 GDLSVGGVALAGLAGRFGTPVYVLDEDEVRSRCRTYRAAFP--DARVLYAAKAFLSRAMA 100 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G GLD+ S GEL A AA P ER+V G KT +I+ AL+ G+ V+S S Sbjct: 101 RWIDEEGLGLDVCSVGELELAHAAGFPPERMVLHGNAKTPHDIETALRLGVGRIVVDSPS 160 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E+ + G++ + RV P ++A H+KI TG KFG+ + + +A A L Sbjct: 161 EIARIAALTGPGGRQ-KVMVRVVPGVSAGGHEKIRTGTDGQKFGLSLTDGSAQHAIARVL 219 Query: 189 --PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYH 245 P ++++G+ HIGSQI + + A + L L +++ N +D+GGG G+A+ Sbjct: 220 GQPQLELTGLHCHIGSQITDAKPYAVAVRRLVGLMARIKDNHGVTFPELDLGGGHGVAHR 279 Query: 246 SDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + A G + ++EPGR +VA G+ + +V+++K + Sbjct: 280 PGDPALDLTALARRLGAELATSCAAAGLPVPRTVIEPGRAIVAPAGVALYRVLAVKHTGP 339 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 FV +D M+D RP LY A + I + A +VG CE GD +A + + Sbjct: 340 NLFVAVDGGMSDNPRPALYGARYAPRLIGRSTTAGP-VAATVVGRHCEAGDVLANDVLLP 398 Query: 359 -LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 R GDLL + GAY + +YN P + V+ ++ R T ++L D Sbjct: 399 GDIRSGDLLAVPVAGAYQVSMASSYNLVGRPPVVAVHDGTARLLIRRETQEDLRRRDV 456 >gi|159905856|ref|YP_001549518.1| diaminopimelate decarboxylase [Methanococcus maripaludis C6] gi|159887349|gb|ABX02286.1| diaminopimelate decarboxylase [Methanococcus maripaludis C6] Length = 436 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 151/430 (35%), Positives = 224/430 (52%), Gaps = 16/430 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCY 57 +L + +LA++ TP Y S T KN+ + +F G + ++ + Sbjct: 9 LTVEGKNLKIDGYDASELANLYGTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISF 68 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A KAN+N AV K L+ LG G DIVS GEL A + VP+E+IVF+G K DEI + +++ Sbjct: 69 AYKANTNLAVTKLLSKLGCGADIVSAGELYIAKLSDVPSEKIVFNGNCKLKDEIKMGIEA 128 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH- 176 I FNV+S S+L +N+ A +GK A +AFRVNP+++ TH KISTG K++KFG+ I Sbjct: 129 EIRAFNVDSTSDLILINETAKEMGKVANVAFRVNPNVDPKTHPKISTGMKKNKFGLDIES 188 Query: 177 -QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 A + VKI G+ HIGSQ+ I F + K + D L++ G I+ ++ Sbjct: 189 GIALETIKMAEKMENVKIVGIHCHIGSQLTDISPFVEEAKKIMDFVVLLKNEGIEIRDVN 248 Query: 236 VGGGLGIAYHSDHRPPSSSDYAS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 +GGGLGI Y + + P D + + +ILEPGR LVA G+L+ V Sbjct: 249 LGGGLGIPYDKNTKIPVQKDLSKAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTV 308 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 +K + ++++D MND MRP +Y+AYHEI + G +CE+ D Sbjct: 309 EHVKDTPVAKWIMIDAGMNDMMRPAIYEAYHEIVPCTVR---AEKEVVSVAGGLCESSDV 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 +R++ D + I GAYG + YNSR I+ N + +IR R T +L Sbjct: 366 FGKDRELTKMEVKDTVAILDVGAYGISMANNYNSRGKPAMILTNEKEVSLIRARETLADL 425 Query: 411 IELDSIPAWL 420 I D +P L Sbjct: 426 ISKDIVPNHL 435 >gi|310828105|ref|YP_003960462.1| hypothetical protein ELI_2517 [Eubacterium limosum KIST612] gi|308739839|gb|ADO37499.1| hypothetical protein ELI_2517 [Eubacterium limosum KIST612] Length = 425 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 127/417 (30%), Positives = 201/417 (48%), Gaps = 11/417 (2%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAVIKTLA 72 LA TP Y S + N +AF+ + V YA K N + + + Sbjct: 9 GHDTVALAQKYGTPLYVMSEDILRANINRIKDAFESAGAVYDVNYAGKTFLNMGMCRIIE 68 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G LD+ S GEL A+ + RI F G K E+++AL + ++SE EL+ Sbjct: 69 SEGISLDVASGGELYTAVKSGFNPARICFHGSNKNQAELEMALGYKVGRIVIDSEWELER 128 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L L + + FRV+P I A+TH+ I TGK + KFG+P+ Q + + V+ Sbjct: 129 LQLLTEELEQPVKVLFRVSPGIEAHTHELIQTGKLDSKFGLPLSQAREIIGRTKEMNYVE 188 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 +G+ HIGSQI + F A +++ DL + L S+G N+ I++GGG GI Y + Sbjct: 189 TAGIHCHIGSQIADEKPFLLASEVMLDLYKALLSDGLNLTEINLGGGFGIPYLKEDPSFD 248 Query: 253 SSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSAD-KTFVIL 304 + Y + + + KI++EPGR + A GI + V ++K+ K +V + Sbjct: 249 VTSYIPKMVDHMREMAEQREVPMPKIVVEPGRSVAAPAGITLYTVGTVKEIPGLKKYVSV 308 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D M D RP LY A ++ P + L + G CET D + + K+ P+ GD Sbjct: 309 DGGMADNPRPALYGADYDAVICNKPQDEALMEEVTVSGKACET-DTLIKSIKLPSPQSGD 367 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQ 421 L + TGAY + YN I++ G Q ++ R +F++L++ D IP+WL+ Sbjct: 368 TLAVLHTGAYNYSMASNYNRFRRPAVILLKGDQSAVLVERESFEDLVKNDRIPSWLE 424 >gi|301301010|ref|ZP_07207171.1| diaminopimelate decarboxylase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851367|gb|EFK79090.1| diaminopimelate decarboxylase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 430 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 122/422 (28%), Positives = 192/422 (45%), Gaps = 14/422 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVC--YALKANSNQ 65 EG + +LA TP Y I++ F F+ + YA KA S+ Sbjct: 10 EGHYTIRGLDSLELAKEFGTPTIVYDVAKIKEQIAKFKAGFEEENVKYHISYASKAFSSL 69 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ +A G G D+VS GEL AL + + + F G K+ E+++A+ S + V+ Sbjct: 70 AMYDLVAKSGIGSDVVSGGELYAALKGGMDPQELEFHGNNKSRAELEMAVDSNVGYIIVD 129 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + E+ LN+ K A I R+ P I+A TH+ ISTG+ + KFG + + A Sbjct: 130 NFYEIDLLNEVLTEKNKTADILLRLAPGIHAETHEYISTGQAKSKFGFDLQSGQASEALE 189 Query: 186 STL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGGGLGI 242 TL P K+ GV HIGSQI F +A K L D + + +++GGG GI Sbjct: 190 KTLANPRFKVLGVHSHIGSQIFATAGFVEAAKKLMDFLSAWKEKYDFTAEVLNLGGGFGI 249 Query: 243 AYHSDHRPPSSSDYASLIHQYF-------GNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y P D+ +I + I +EPGR +V + G+ + V S K Sbjct: 250 RYTDQDEPLDVKDFVKIIVEAVKEKSKELNYPMPAIWIEPGRSVVGEAGVSLYTVGSRKD 309 Query: 296 SADK-TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +FV +D M D +RP LY A ++ + +A IVG CE+GD + + Sbjct: 310 VEGVGSFVAVDGGMGDNIRPALYGAEYDAVL-AKDPNAPIAQNASIVGKYCESGDILIKD 368 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 PGD++ + TGAYG V + YN + V + ++ R +++++I + Sbjct: 369 YDFPKTEPGDVIAMLSTGAYGYVMASNYNRNPRPAIVFVEDGKARLVVKRESYEDMIRNE 428 Query: 415 SI 416 + Sbjct: 429 IL 430 >gi|323466762|gb|ADX70449.1| Diaminopimelate decarboxylase [Lactobacillus helveticus H10] Length = 438 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 122/420 (29%), Positives = 191/420 (45%), Gaps = 14/420 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQA 66 G L V +LA TP Y I F F+ + V YA KA + A Sbjct: 14 GHLTIGGVDTVELAKKYGTPLVVYDVGQIRHQIRAFKKVFEEENVKYAVSYASKAFACIA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + A G+ D+VS+GEL AL A P ++I F G K+ E+++A+++ I +++ Sbjct: 74 MYQVAAAEGAYTDVVSDGELYTALKANFPVKKISFHGNNKSKSELEMAVKNHIGKIIIDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+K L+Q K + R+ P I+A+TH+ TG+ + KFG + + A Sbjct: 134 FHEIKLLDQVLRKHDAKIDVMLRITPGISAHTHEYDQTGQVDSKFGFDLESGQADLALEQ 193 Query: 187 TLPG--VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIA 243 L + + G+ HIGSQI ++ F A K L ++ + R G+ Q I+VGGG GI Sbjct: 194 VLANSRMNMIGIHAHIGSQIFELNGFEMAAKKLMEVAENWRSQYGYTAQVINVGGGFGIK 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIIL-------EPGRFLVADVGILVTKVISIKKS 296 Y ++ P ++ I + EPGR +V G + S K Sbjct: 254 YTAEDNPLRPEEFVRAIVKTIKKEAKNAAFPLPEIDIEPGRSIVGPAGYNLYTTGSRKIV 313 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D +RP LYDA +EI +P D L H I G CE+GD +A ++ Sbjct: 314 PGHCPYVTVDGGMGDNIRPALYDAKYEIVLATDPRAD-LTEHVRIAGKYCESGDILADDQ 372 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + G LL + TGAYG + YN + + ++ R + ++L+ LD Sbjct: 373 ALPATKSGSLLAMLDTGAYGYSMASNYNRNARPAVVFAENGKAQLVIKRESLEDLVHLDQ 432 >gi|254424507|ref|ZP_05038225.1| diaminopimelate decarboxylase [Synechococcus sp. PCC 7335] gi|196191996|gb|EDX86960.1| diaminopimelate decarboxylase [Synechococcus sp. PCC 7335] Length = 472 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 114/430 (26%), Positives = 191/430 (44%), Gaps = 14/430 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 + L + + +L +P Y + + +F+ ++++ YA KA + Sbjct: 45 KDHLTVGSCDVVELLETFGSPLYILDEQTLRTACRQYKQSFEEHYPGESLIVYASKAWNC 104 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 AV G +D+VS GE+ A+AA + + F G K+I+E+ L L + V Sbjct: 105 LAVCAIALQEGIAIDVVSGGEISTAIAAGATGKMLYFHGNNKSIEELQLGLDADAR-IVV 163 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ ELKTL Q A A I R+ P I +TH+ I TG + KFG Q+ ++ + Sbjct: 164 DNWHELKTLEQIAKDARTTATILVRLTPGIECHTHEYIQTGHIDSKFGFDPDQLEEVFEF 223 Query: 185 -ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A+ + G+ HIGSQI +++ ++ Q R G +I+ ID+GGGLGI Sbjct: 224 IANKTEHINCIGLHAHIGSQIFELQPHRDLANVMMRWFQSARQYGLSIEEIDIGGGLGIR 283 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y PPS ++A + + K++ EPGR L+ + V K Sbjct: 284 YTESDDPPSIDEWAKTVCESMTAACTASGLPYPKLLCEPGRSLIGSACVTAYTVGGQKCV 343 Query: 297 ADKT-FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +V +D M+D RP Y + + + + L + G CE+GD + + Sbjct: 344 PGIRSYVSVDGGMSDNPRPITYQSVYRVLAASKMSA-PLSETVTLAGKHCESGDVVIHSA 402 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + G++L I TGAY S YN ++VN + +I R T+ +L+ D Sbjct: 403 YLPTLESGEVLVIPATGAYNYSMSSNYNRVPRPAAVLVNQGKADLILRRETYADLMSHDC 462 Query: 416 IPAWLQKTPK 425 +P L+ + Sbjct: 463 LPDMLRPAAQ 472 >gi|313899022|ref|ZP_07832549.1| diaminopimelate decarboxylase [Clostridium sp. HGF2] gi|312956221|gb|EFR37862.1| diaminopimelate decarboxylase [Clostridium sp. HGF2] Length = 457 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 122/425 (28%), Positives = 205/425 (48%), Gaps = 14/425 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKA 61 + + L VS+E+LA+ TP Y Y I + F F + DT V YA KA Sbjct: 28 MEMSKKVLEISGVSVEQLANACGTPLYVYDENKITQKMSQFHELFQSENFDTEVLYASKA 87 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 S +A+++ A G LD+VS GEL A+ + P E+I F G KT DE+ +AL++G+ C Sbjct: 88 FSCKAIVQMAAIHGLCLDVVSGGELYTAMQSGFPMEKIYFHGNNKTWDELIMALEAGVGC 147 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V++ E + L + A +G RVNP + A+THK I T + KFGI I ++ + Sbjct: 148 IVVDNAMECELLVKAAQRVGTTVRTLIRVNPGVEAHTHKYIVTAHLDSKFGISISRMEDI 207 Query: 182 YAYASTL---PGVKISGVDMHIGSQIDQIESFHKAFKL-LRDLTQQLRSNGHNIQHIDVG 237 TL P + G HIGSQI +++ + ++ + ++ G + +++G Sbjct: 208 RDMIQTLTSIPNIAFEGFHSHIGSQIFDKDAYVAEIQTLMKFVDDMQKAYGITTKALNLG 267 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKV 290 GG Y S+ P + I + + ++EPGR +VA+ G + ++ Sbjct: 268 GGFAAYYTSEDHPIPLQEVCQTILDTCKWERDRYQLPLEKLMIEPGRSIVAEAGSTLYRI 327 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 K++ +K ++ +D M+D +RP LY A + I N + + G CE+GD Sbjct: 328 GYQKQTENKKYIFVDGGMSDNIRPALYQAAYAC-DIANRMDEEKSETVTVAGKCCESGDI 386 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + N ++ + DLL + TGAYG + YN + V + + R T++++ Sbjct: 387 LVENVRLPRAQTNDLLILYTTGAYGYSMASNYNRLGRPAVVFVKDGKVRFVVKRETYEDM 446 Query: 411 IELDS 415 +L+ Sbjct: 447 CKLEC 451 >gi|302873537|ref|YP_003842170.1| diaminopimelate decarboxylase [Clostridium cellulovorans 743B] gi|307688283|ref|ZP_07630729.1| diaminopimelate decarboxylase [Clostridium cellulovorans 743B] gi|302576394|gb|ADL50406.1| diaminopimelate decarboxylase [Clostridium cellulovorans 743B] Length = 430 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 118/424 (27%), Positives = 195/424 (45%), Gaps = 14/424 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 + + L+ V+ +L TP Y + ++ +AF V YA KA Sbjct: 7 MEVRDNELYIGGVASTELVKNYGTPLYVIDEKLVRNTCKSYYDAFKVKEGKNRVAYAGKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + + + G LD+VS GEL A A P E++ F G K+ +EI L + G+ Sbjct: 67 FLPMEMCRIINEEGLCLDVVSGGELFTAYKAGFPLEKVFFHGNNKSHEEIKLGINLGVGT 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI--H 179 F V++ E++ +++ A I FR+ P I A+TH I TG+ + KFG I Sbjct: 127 FVVDNLYEIELIDKYAKEKNVVQNIYFRITPGIEAHTHDYIQTGQIDSKFGFTIDSEALD 186 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGG 238 A +K+ G+ HIGSQI IE + +L+ L +++R +I +D+GG Sbjct: 187 FAIKTAKEKENIKLIGIHAHIGSQIFDIEPYGDLVRLMFTLAKRIRDEFDIDITDVDLGG 246 Query: 239 GLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 G+G+ Y + P S+ + A I + ++++EPGR ++ + G + + Sbjct: 247 GIGVYYTDEDEPKSAQQFCETIVNKAEEIAKELRMEVPRLVIEPGRSVIGNAGSTLYTIG 306 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 +IK D +D M D +RP LY+A +E N D + G CE+GD Sbjct: 307 AIKSVLDIRKYVSIDGGMTDNIRPALYNAAYECAL-ANRMNDEEKEVVTVAGKCCESGDI 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + +I GD+L + TGAYG S YN + V ++ R +++EL Sbjct: 366 LLKDVEINKVNSGDILVVPTTGAYGYSMSNNYNKTPKAAVVSVMDGNTKVMCRRQSYEEL 425 Query: 411 IELD 414 I+L+ Sbjct: 426 IQLE 429 >gi|284928894|ref|YP_003421416.1| diaminopimelate decarboxylase [cyanobacterium UCYN-A] gi|284809353|gb|ADB95058.1| diaminopimelate decarboxylase [cyanobacterium UCYN-A] Length = 478 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 103/432 (23%), Positives = 177/432 (40%), Gaps = 18/432 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANS 63 + L +++ L +P Y + + + + F + V YA KA S Sbjct: 41 EDDFLEIGECNIKDLVEKFGSPLYILDEKTLRTSCKQYRDNFKLYYKGSSQVIYASKAWS 100 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVP--------AERIVFSGVGKTIDEIDLAL 115 +V+ +A G D+VS GE A A R+ F G K++DE++LA+ Sbjct: 101 CLSVVGIIATENLGFDVVSGGEFHTVQIAMSKLGYSEIEIANRVYFHGNNKSLDELELAI 160 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 ++ + + K I R+ P I +TH+ I TG KFG + Sbjct: 161 KANCNIVVDNWLELQNLVELGSCLPEKSIRILLRLTPGIECHTHEYIKTGHVNSKFGFNL 220 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 + ++ Y + G+ HIGSQI + + +L L ++ + G + ++ Sbjct: 221 NDFETVINYVIKQKVLNCRGLHSHIGSQIFEKQPHRDLAFILVKLLKKSQELGLTLSELN 280 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVT 288 +GGGLGI+Y SD PPS ++ + + K+I EPGR L+ G+ Sbjct: 281 IGGGLGISYTSDDNPPSIEEWVKNVSESVMEACLDSNLSFPKLIAEPGRSLIGSAGVTAY 340 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V S K+ + + I N +++ I G CE+G Sbjct: 341 TVGSRKEIPGLHTYLAIDGGMSDNPRPITYQSLYSILIGNKMSEKITETFIIAGKHCESG 400 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D I + ++ GD+L + TGAY + YN ++VN + ++I R T+ Sbjct: 401 DIIIKDAQLPQTHTGDILVVMGTGAYNYSMASNYNRIPRPAAVLVNHGEANLIVRRETYD 460 Query: 409 ELIELDSIPAWL 420 +L++ D +P L Sbjct: 461 DLVKQDCLPQRL 472 >gi|257871090|ref|ZP_05650743.1| diaminopimelate decarboxylase [Enterococcus gallinarum EG2] gi|257805254|gb|EEV34076.1| diaminopimelate decarboxylase [Enterococcus gallinarum EG2] Length = 434 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 123/432 (28%), Positives = 193/432 (44%), Gaps = 14/432 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKAN 62 + + L + LA TP Y +S T I F +T YA KA Sbjct: 4 EIKDNHLFWDGCDTVALAKEFGTPLYVFSVTEIRTQCRAIREEFLSRYENTRAAYASKAF 63 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + A+++ + G LD+VS GEL A+ A PAE+I F+G K+IDE+ LA+ G+ Sbjct: 64 NTLAMLRLIDEEGLSLDVVSGGELYTAIQAGFPAEQIEFNGNNKSIDELALAIDYGVGRI 123 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V+ E+ + +KA + FR+ P++N TH ISTG+K+ KFGIP+ + Sbjct: 124 IVDGSQEIGLIRALCQEKQRKAKVMFRITPEVNVQTHAFISTGQKDSKFGIPLDEEILFP 183 Query: 183 --AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGG 239 P + G+ HIGSQ+ S A + L + + ++ ++VGGG Sbjct: 184 LIEEVIDAPEIDFYGLHFHIGSQLSDNHSHIAATEAALALVLEIHHRFDYTVKELNVGGG 243 Query: 240 LGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 G+ Y S + Q + +++EPGR +VA+ GI + + + Sbjct: 244 FGVRYTEKDIRQPYSYFLDPVMATIETFCQAHQLQRPTVVIEPGRSIVAEAGISLHTIGT 303 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK +D M D +RP LY A + N A + I G CE+ D + Sbjct: 304 IKTLPQIRTYASIDGGMTDNIRPGLYQAEYTGIL-ANRAAEAATETVTISGKACESTDIL 362 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + ++ GDL TGAYG + YN + + V ++ R TFQ+LI Sbjct: 363 VKDLQLPKVETGDLFATFATGAYGYSMASNYNKLAIPAVVFVEKGHAELVVERQTFQQLI 422 Query: 412 ELDSIPAWLQKT 423 + + IP++L K Sbjct: 423 QNERIPSFLMKE 434 >gi|120405303|ref|YP_955132.1| diaminopimelate decarboxylase [Mycobacterium vanbaalenii PYR-1] gi|119958121|gb|ABM15126.1| diaminopimelate decarboxylase [Mycobacterium vanbaalenii PYR-1] Length = 476 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 116/428 (27%), Positives = 194/428 (45%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + VS+ +A TP + + AF G V YA KA V Sbjct: 46 DGVVSIAGVSVADIAAEFGTPVFVIDEADFRARCRDIAAAFGG-GEHVRYAAKAFLCTEV 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LD+ S GEL AL A PAERI G K++ E+ A+++GI V+S Sbjct: 105 ARWIDEEGLSLDVASGGELAVALHAGFPAERIALHGNNKSVAELTAAVEAGIEHVVVDSM 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AYA 185 +E+ L++ A G + RV + A+TH+ IST ++ KFG+ + ++ Sbjct: 165 TEIDRLDKIAGEAGVVQDVLIRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMTAVRRV 224 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD-----LTQQLRSNGHNIQHIDVGGGL 240 +++ G+ HIGSQI + F A + + + + +D+GGGL Sbjct: 225 FETDHLRLVGLHSHIGSQIFDVAGFELAAHRVIGLLRDAVAEFGVEKTSQMSIVDLGGGL 284 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKV--- 290 GI+Y PP + A +H + ++++EPGR + I + +V Sbjct: 285 GISYLPHDDPPPMGELADKLHAIVRHESAAVGLPAPRLVVEPGRAIAGPGTITLYEVGTV 344 Query: 291 --ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 ++I ++ +V +D M+D +R +LYDA +++ + + + +VG CE+G Sbjct: 345 KDVAISSDRNRRYVSVDGGMSDNIRTSLYDAEYDVRLVSRTSNAEPT-LSRVVGKHCESG 403 Query: 349 DFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + I PGDLL + TGAY S YN + V + +I R TF Sbjct: 404 DIVVRDAWIPDDVGPGDLLGVAATGAYCYSMSSRYNLIGRPAVVAVRDGRARLILRRETF 463 Query: 408 QELIELDS 415 +L+ L+ Sbjct: 464 DDLLSLEV 471 >gi|15644265|ref|NP_229317.1| diaminopimelate decarboxylase [Thermotoga maritima MSB8] gi|8134399|sp|Q9X1K5|DCDA_THEMA RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|4982083|gb|AAD36584.1|AE001799_16 diaminopimelate decarboxylase [Thermotoga maritima MSB8] Length = 386 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 131/396 (33%), Positives = 214/396 (54%), Gaps = 18/396 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L K+A + TP Y Y + K F+G++ + +A+KAN+N ++K L G G Sbjct: 4 LRKVAEIHGTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLKILREEGFG 63 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D+V++GEL A A VP+ +V++G GK+ D+++ L+ + NV+S E++ + Sbjct: 64 MDVVTKGELLAAKLAGVPSHTVVWNGNGKSRDQMEHFLREDVRIVNVDSFEEMEIWRELN 123 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP+++A TH ISTG K+ KFGIP+ + S + I G+ Sbjct: 124 PEGVEYF---IRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFMER---FRSMNIRGLH 177 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +HIGSQI ++E F +AF + +++ + I++GGG GI Y + SS Sbjct: 178 VHIGSQITRVEPFVEAFSKVVRASERYG-----FEEINIGGGWGINYSGEELDLSSYR-- 230 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 ++I+E GR++VA G L+ +V+ +K+ +K FV++D MN +RP LY Sbjct: 231 -EKVVPDLKRFKRVIVEIGRYIVAPSGYLLLRVVLVKRRHNKAFVVVDGGMNVLIRPALY 289 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 AYH I + + AD+VGP+CE+GD IA +R++ PGD++ +E GAYG Sbjct: 290 SAYHRIFVLGKQ---GKEMRADVVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYT 346 Query: 378 QSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 S YNS E++V + +IR R T ++ + Sbjct: 347 MSNNYNSTTRPAEVLVRENGRISLIRRRETEMDIFK 382 >gi|57242052|ref|ZP_00369992.1| diaminopimelate decarboxylase [Campylobacter upsaliensis RM3195] gi|57017244|gb|EAL54025.1| diaminopimelate decarboxylase [Campylobacter upsaliensis RM3195] Length = 402 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 160/403 (39%), Positives = 229/403 (56%), Gaps = 6/403 (1%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 KL +TPFY Y I+ +L +AF + + YA+KANSN ++++ LA L SG D Sbjct: 5 KLKEEFKTPFYLYDFDLIKSRFLELKSAFKARKSQIFYAMKANSNLSLLQMLARLDSGFD 64 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 VS GE++RAL V +I+FSGVGK+ +E+ AL+ I N+ESE E+ L A Sbjct: 65 CVSIGEVKRALRVGVKPYKIIFSGVGKSEEELKQALKFDILYINLESEEEMLLLESVAKK 124 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 L KA I+ RVNP+++A TH ISTG E+KFG+ + +Y YA+ ++ GV H Sbjct: 125 LDLKARISIRVNPNVDAKTHPYISTGLNENKFGVELEVARKMYLYAAKSEFLEPVGVHFH 184 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 IGSQ+ I H A ++ L ++L++ ++ DVGG + + P DYA Sbjct: 185 IGSQLLDISPIHDAALIVAKLLRELKALKIELKFFDVGG-GLGVGYEGEKEPCLYDYAQG 243 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 I L I LEPGRFLVA G+LV V+ K + K F+I+D AMND +RP+LYDA Sbjct: 244 ILANLSGLDVTIGLEPGRFLVAKSGVLVCSVLYEKITPKKRFMIVDAAMNDLIRPSLYDA 303 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 YHEI D+VG ICE+GDF A +RK+A + GD++ I++ GAYG S Sbjct: 304 YHEIVLPY---TKGEVSPCDVVGGICESGDFFAKDRKLAKSKSGDIVLIKEAGAYGFSMS 360 Query: 380 GTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQK 422 YN+R I E+ + ++R R F++LI L+ +L+ Sbjct: 361 SNYNTRPRICELALENGAVKMVRKREKFEDLIALEE--EFLEN 401 >gi|166365281|ref|YP_001657554.1| diaminopimelate decarboxylase [Microcystis aeruginosa NIES-843] gi|166087654|dbj|BAG02362.1| diaminopimelate decarboxylase [Microcystis aeruginosa NIES-843] Length = 467 Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 107/425 (25%), Positives = 173/425 (40%), Gaps = 16/425 (3%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQAV 67 L + L +P Y + + F ++ V YA KA + A+ Sbjct: 41 LEIGGCDVTTLVERFGSPLYIVDEVTLRTACRQYLQGFQTHYPGESRVIYASKAWNCLAL 100 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERI----VFSGVGKTIDEIDLALQSGIYCFN 123 +A G G D+VS GE+ L A ++ F G K+I E++ A++ Sbjct: 101 SAVVAREGLGFDVVSAGEIHTVLTALDQIKKTDVPIYFHGNNKSIAELEYAIEHNCIIIV 160 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 + PI R+ P I +TH+ I TG + KFG HQI +++ Sbjct: 161 DNWLELENLVKLGENRPDTPIPILLRLTPGIECHTHEYIRTGHLDSKFGFDPHQIEAVFD 220 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 Y P + G+ HIGSQI + + +L D + G ++ ++VGGGLGI Sbjct: 221 YVLAHPLLNCLGLHAHIGSQIFERQPHQDLAAVLADWFKLGLERGLPLEQLNVGGGLGIR 280 Query: 244 YHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y PPS ++ Q G +I EPGR L+A + V + K+ Sbjct: 281 YLESDDPPSIEEWVQAVSLAVAKACQERGIAYPLLIAEPGRSLIATACVTAYTVGNRKEI 340 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + I +D M+D RP Y + + + + + I G CE+GD + + Sbjct: 341 PEIRTYIAVDGGMSDNPRPITYQSVYRAVVANKMSQECQEV-VTIAGKHCESGDILIKDI 399 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + PGD+L + TGAY + YN ++V + ++I R +L+ D Sbjct: 400 TLPKTNPGDILVVLATGAYNYSMASNYNRLPRPAAVIVQNGEANLILERENLADLLRQDR 459 Query: 416 IPAWL 420 +P L Sbjct: 460 LPNRL 464 >gi|124008785|ref|ZP_01693474.1| diaminopimelate decarboxylase [Microscilla marina ATCC 23134] gi|123985698|gb|EAY25578.1| diaminopimelate decarboxylase [Microscilla marina ATCC 23134] Length = 418 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 114/418 (27%), Positives = 186/418 (44%), Gaps = 9/418 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 + +G + V + + TP Y Y + +AF G++ + YA KA + Sbjct: 1 MELVDGRYQIQGVDVLDICQKFDTPLYVYDAEKMATKLNMLKDAFKGLNLKIKYAAKALT 60 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N +V+K L G GLD+VS E L E I+F+ +++EI +A++ G+ Sbjct: 61 NVSVLKFLRTQGVGLDVVSIQEAHLGLKTGFKPEEILFTPNCVSLEEIKMAVELGLVINI 120 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 + L Q + G P R+NP + A + IS G + KFG+ I Q L Sbjct: 121 DN----ISILEQFGHAYGDSVPCCIRINPHLMAGGNANISVGHIDSKFGVSILQARHLLR 176 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 T +K++G+ MH GS I E F + +L DL Q L Sbjct: 177 VIKT-NNIKVTGLHMHTGSDILDAEVFLRGADILFDLAQDLPDLEFVDFGSGFRVAYKEG 235 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCK--IILEPGRFLVADVGILVTKVISIKKSADKTF 301 + ++ + + I EPG+FLV++ G + K IK + F Sbjct: 236 DVTTDIVDLGKKLTVRFKEFCKDYGRELEIWFEPGKFLVSEAGHFLMKTNVIKTTPATVF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 V +D N +RP +YD++H I + NP + + +VG ICET D +RK+ R Sbjct: 296 VGVDSGFNHLIRPMMYDSHHTIFNVSNPNSETTRV-YTVVGYICET-DTFGWDRKLNEVR 353 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GD++ ++ GAYG + YNSR E++V+ + H+IR R T +++ + + Sbjct: 354 EGDIIALKNAGAYGFSMASNYNSRFRPAEVLVHNGKAHLIRKRETMDDILRNQVMLDF 411 >gi|312868979|ref|ZP_07729157.1| diaminopimelate decarboxylase [Lactobacillus oris PB013-T2-3] gi|311095482|gb|EFQ53748.1| diaminopimelate decarboxylase [Lactobacillus oris PB013-T2-3] Length = 438 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 119/420 (28%), Positives = 188/420 (44%), Gaps = 14/420 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L LA TP Y + I F F+ ++ V YA KA + A Sbjct: 14 GHLMIGGCDSLDLAQQYGTPLVVYDVSQIRHQIRAFKRVFEANQVNYEVSYASKAFAAIA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + G+ +D+VS GE+ AL A P F G K+ DE+ +A+++ I V++ Sbjct: 74 MYQVADQEGAHVDVVSGGEMYTALKAGFPLSHASFHGNNKSYDELVMAVKNNIGVIVVDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+K LNQ L + + R+ P I+A+T+K I TG+ + KFG + + A + Sbjct: 134 FYEIKLLNQVLTELDARVKVMLRITPGISAHTNKYIQTGQVDSKFGFDLESGQADRALEA 193 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L P + + G+ HIGSQI ++ F A KL+ + + Q I+VGGG GI Sbjct: 194 VLASPRMTMIGLHAHIGSQIFELTGFEGVANKLVEVANHWQQRYDYQAQVINVGGGFGIR 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y D +P ++ I + I +EPGR +V G + V S K Sbjct: 254 YTKDDQPLRPEEFVDAIIKAIKAAVASTALEMPAIWIEPGRSIVGPAGYNLYTVGSRKDL 313 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D +RP LY A +E L H + G CE+GD ++ ++ Sbjct: 314 PGYRPFVTIDGGMGDNIRPALYQAEYETVL-ARDPQAPLAEHVRLAGKYCESGDILSQDQ 372 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + +PGD+L + TGAYG + YN + ++ R ++++L+ LD Sbjct: 373 ALPKTKPGDVLAMLDTGAYGYAMASNYNRNPRPAVVFAENGHSQLVIERESYEDLVHLDR 432 >gi|290957373|ref|YP_003488555.1| diaminopimelate decarboxylase [Streptomyces scabiei 87.22] gi|260646899|emb|CBG69996.1| diaminopimelate decarboxylase [Streptomyces scabiei 87.22] Length = 463 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 124/420 (29%), Positives = 192/420 (45%), Gaps = 12/420 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + + ++ LA TP Y + AF G D V YA KA ++A Sbjct: 44 EDGVVSVGGIDVKALAEEFGTPAYFVDEADFRARARAWRTAF-GQDADVFYAGKAFLSRA 102 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ L G LD+ S GEL AL+A +PA+RI F G K+ DEI A+++G+ ++S Sbjct: 103 VVRWLHEEGLNLDVCSGGELATALSAGMPADRIAFHGNNKSTDEIHRAVEAGVGRIVLDS 162 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAY 184 E+ + A SLG++ + RV + A+TH+ I+T ++ KFGIP+ Sbjct: 163 FQEIVRVAHIAQSLGRRQRVQIRVTVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRR 222 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A L G+++ G+ HIGSQI F A + L + +R + ID+GGGLGIA Sbjct: 223 ALRLDGLELIGIHSHIGSQIFDTSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIA 282 Query: 244 YHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y S P + A + +I +EPGR +V + +V +IK Sbjct: 283 YTSADDPREPHEIAKALTEIVNRECDAARLRTPRISVEPGRAVVGPTAFTLYEVGTIKPL 342 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + T +V+ + + A +VG CE+GD + + Sbjct: 343 DGLRTYVSVDGGMSDNIRTALYDAEYSVALVSRTSEAEPMLARVVGKHCESGDIVVRDAF 402 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + PGDL+ + TGAY + YN L P + VN Q +I R T ++L+ LD Sbjct: 403 LPADLAPGDLIAVPATGAYCRSMASNYNHVLRPPVVAVNDGQARVIVRRETEEDLLRLDV 462 >gi|84494549|ref|ZP_00993668.1| diaminopimelate decarboxylase [Janibacter sp. HTCC2649] gi|84384042|gb|EAP99922.1| diaminopimelate decarboxylase [Janibacter sp. HTCC2649] Length = 487 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 128/437 (29%), Positives = 196/437 (44%), Gaps = 30/437 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------DTMVCYALKA 61 EG L + ++ +A TP Y +F + F + YA KA Sbjct: 44 EGRLTVAGLDVDTIAREFGTPAYVVDEGDFRARARSFRDDFAAPFETVCGGADIYYAGKA 103 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 AV K +A G LD+ S GEL A A PAERI F G K++ EI AL G+ Sbjct: 104 FLCTAVAKWVAQEGLSLDVCSGGELAVARRAGFPAERIGFHGNNKSLAEIRDALDYGVGR 163 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIH 179 V+S E++ + + A LG AP+ RV + A+TH+ I+TG ++ KFG + Q Sbjct: 164 IVVDSFIEIERVAEIAAELGVVAPVMIRVTVGVEAHTHEFIATGHEDQKFGFSLSGGQAL 223 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGG 238 + + G+ HIGSQI F + + L L Q+ + GH+ ID+GG Sbjct: 224 VAAKAVLAHDTLDLRGLHSHIGSQIFDTGGFEMSARRLVGLHAQIANELGHHSPEIDLGG 283 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFLVADVG 284 G G+AY S H P + + + G ++ +EPGR +V Sbjct: 284 GFGMAYTSQHTPLGPGELGAQLADIVGREFKAIGANSDSVAVPFPRVSIEPGRAIVGPST 343 Query: 285 ILVTKVISIKK-----SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 + +V ++K + +V +D M+D +RP LY+A + N + D + A Sbjct: 344 FTLYEVGTVKPVELGDHHSRVYVSVDGGMSDNVRPALYEADYSCTL-ANRSSDAEPMLAR 402 Query: 340 IVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQF 398 +VG CE+GD + + + +PGDL+ + TGAY S YN P + V + Sbjct: 403 VVGKHCESGDIVVQDEWLPADTQPGDLIAVPGTGAYCRALSSQYNHTPRPPVLAVRDGKA 462 Query: 399 HIIRPRMTFQELIELDS 415 +I R T +L+ LD Sbjct: 463 RVIVRRETIDDLLALDV 479 >gi|237736701|ref|ZP_04567182.1| diaminopimelate decarboxylase [Fusobacterium mortiferum ATCC 9817] gi|229420563|gb|EEO35610.1| diaminopimelate decarboxylase [Fusobacterium mortiferum ATCC 9817] Length = 434 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 112/424 (26%), Positives = 186/424 (43%), Gaps = 14/424 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 K +G L V + +LA TP Y IE N + F T + YA KA Sbjct: 7 MKDEQGVLSIGGVKVTELAQKYGTPLYIMDQELIESNMRKYKENFKSDKFQTQIVYASKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 +A+ + + +D VS GEL + + +R+ G KT++E+++ + GI Sbjct: 67 FLAKAMCQLVEKYDMDIDAVSGGELYTIKVSGLDMKRVHMHGNNKTLEELEMCVDYGIGS 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH-- 179 +++E+E++ L+ KK R+N I+A+TH+ I T K KFG I Sbjct: 127 IIIDNETEIENLSYVCAQKNKKIKAMLRINIGIDAHTHEYIKTSKHSSKFGESIFDEKLV 186 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGG 238 + ++ G HIGSQI ++FH+ + + T+++ G I I++GG Sbjct: 187 GIVEKIVKDKNIEFLGFHCHIGSQIFDTKAFHEGIETMVVETKKIADTLGIKIPEINLGG 246 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVI 291 G G+ Y + + + ++ K+ +EPGR +V + G + V Sbjct: 247 GFGVYYTENDVEVDIEKFMRSMIEHIEKSLDEHKLEIEKVSIEPGRSIVGNAGSTLYTVG 306 Query: 292 SIKK-SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 IK+ ++ +D M D +RP LY A +E N ++ + G CE+GD Sbjct: 307 GIKQTYGGVKYMFIDGGMTDNIRPALYQAEYEAVI-ANRLDEKEREVVTVAGKCCESGDL 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 I + + GDLL + TGAYG S YN + V + + R +F++L Sbjct: 366 IIKGKSLPKGEKGDLLLVSTTGAYGYSMSSNYNKLARPAVVFVKNGKASLAIRRESFEDL 425 Query: 411 IELD 414 I D Sbjct: 426 IRND 429 >gi|161507355|ref|YP_001577309.1| diaminopimelate decarboxylase [Lactobacillus helveticus DPC 4571] gi|160348344|gb|ABX27018.1| Diaminopimelate decarboxylase [Lactobacillus helveticus DPC 4571] Length = 438 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 120/420 (28%), Positives = 189/420 (45%), Gaps = 14/420 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQA 66 G L V +LA TP Y I F F+ + V YA KA + A Sbjct: 14 GHLTIGGVDTVELAKKYGTPLVVYDVEQIRHQIRAFKKVFEEENVKYVVSYASKAFACIA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + A G+ D+VS+GEL AL P ++I F G K+ E+++A+++ I +++ Sbjct: 74 MYQVAAAEGAYTDVVSDGELYTALKVNFPVKKISFHGNNKSKSELEMAVKNHIGKIIIDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+K L+Q K + R+ P I+A+TH+ TG+ + KFG + + A Sbjct: 134 FHEIKLLDQVLRKHDAKIDVMLRITPGISAHTHEYDQTGQVDSKFGFDLESGQADLALEQ 193 Query: 187 TLPG--VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIA 243 L + + G+ HIGSQI ++ F A K L ++ + R G+ Q I+VGGG GI Sbjct: 194 VLANSRMNMIGIHAHIGSQIFELNGFEMAAKKLMEVAENWRSQYGYTAQVINVGGGFGIK 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIIL-------EPGRFLVADVGILVTKVISIKKS 296 Y ++ P ++ I + EPGR +V G + S K Sbjct: 254 YTAEDNPLRPEEFVRAIVKTIKKEAKNAAFPLPEIDIEPGRSIVGPAGYNLYTTGSRKIV 313 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D +RP LYDA +E +P D L H I G CE+GD +A ++ Sbjct: 314 PGHCPYVTVDGGMGDNIRPALYDAKYETVLATDPRAD-LTEHVRIAGKYCESGDILADDQ 372 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + G LL + TGAYG + YN + + ++ R + ++L+ LD Sbjct: 373 ALPATKSGSLLAMLDTGAYGYSMASNYNRNARPAVVFAENGKAQLVIKRESLEDLVHLDQ 432 >gi|319948887|ref|ZP_08022999.1| diaminopimelate decarboxylase [Dietzia cinnamea P4] gi|319437446|gb|EFV92454.1| diaminopimelate decarboxylase [Dietzia cinnamea P4] Length = 472 Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats. Identities = 110/428 (25%), Positives = 193/428 (45%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V + +LA TP + ++AF G + V YA KA Sbjct: 45 DGVVEIAGVPVTELAAEFGTPLFVIDEDDFRSRCREMADAFGGAE-RVHYASKAFLTTET 103 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ S GEL AL A P ERI G K+ DE+ A++SG+ +++ Sbjct: 104 ARWVAEEGLSLDVASGGELAIALRAGFPPERITVHGNNKSADELRYAVRSGVAHVVIDAM 163 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AYA 185 SE++ L++ A G + RV + A+TH+ I+T ++ KFG + ++ Sbjct: 164 SEIELLDRIAREEGVVQDVFIRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAMEAVRAV 223 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGL 240 ++++G+ HIGSQI I+ F A + + + + + H+D+GGGL Sbjct: 224 FAASHIRLTGLHSHIGSQIFDIDGFELAARRVIGLLRDIVDEFGTERTAQLDHLDLGGGL 283 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKV--- 290 GI+Y PP + A+ + + +++EPGR + + V +V Sbjct: 284 GISYVPSDDPPPVARLAASLREIVEGFARDAGLTPPTLVVEPGRAIAGPGTVTVYEVGVV 343 Query: 291 --ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 + + + ++ +D M+D +R LYDA ++ + A + + +VG CE+G Sbjct: 344 KDVDLAGGEQRRYISVDGGMSDNIRTALYDAVYDARLVGR-ASGAEPVVSRLVGKHCESG 402 Query: 349 DFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + + PGDL+ + TGAY S YN + V + ++ R T Sbjct: 403 DVVVRDLWMPEDAGPGDLVAVAATGAYCYSMSSRYNLIGRPAVVAVRDGRARLMLRRETL 462 Query: 408 QELIELDS 415 +L L+ Sbjct: 463 DDLTSLEV 470 >gi|326803676|ref|YP_004321494.1| diaminopimelate decarboxylase [Aerococcus urinae ACS-120-V-Col10a] gi|326650651|gb|AEA00834.1| diaminopimelate decarboxylase [Aerococcus urinae ACS-120-V-Col10a] Length = 438 Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats. Identities = 132/426 (30%), Positives = 198/426 (46%), Gaps = 15/426 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALK 60 + L+ ++ + +L TP Y Y I+ TF N F T + YA K Sbjct: 6 HMQVVNNELNIADIPVSRLKEEYGTPLYIYDQKGIKDQAKTFINGFHSKKFTTHIIYASK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A N + + + G LD VS GE+ LAA VP E+I F G KT EI LAL+ GI Sbjct: 66 AFLNLYIAQLINEQGCYLDAVSGGEIYTLLAAGVPGEKIYFHGNNKTESEIILALEQGIG 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F ++S+++ + + SL K+A + R+NP I A+THK I T + + KFG+ H + Sbjct: 126 TFVIDSQTDFYKVEKIVKSLNKQAKVLLRINPGIEASTHKYIQTSRDDSKFGMSSHDEDT 185 Query: 181 L--YAYASTLPGVKISGVDMHIGSQI-DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + +G HIGSQI ++ F +A +L Q G ++ I++G Sbjct: 186 VALVKEMVKSDWFDFAGFHCHIGSQILEERFFFEEADLMLGFCRQMEEETGCQVREINLG 245 Query: 238 GGLGIAYHSDHRPPSSSDYASLI--------HQYFGNLQCKIILEPGRFLVADVGILVTK 289 GG G+ Y RP + +QY + +EPGR L+ D G + Sbjct: 246 GGFGVYYSQADRPFDYEKFLQSYIQVIEAAINQYGLEHIDTVSIEPGRALINDFGTALYS 305 Query: 290 VISIKKS-ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V +K + A K FV +D M+D +RP LY A +E N D + + G +CETG Sbjct: 306 VGGVKHTLAGKPFVFVDGGMSDNIRPALYQAKYEAAL-ANRMNDEVEGEYRVAGKLCETG 364 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + + + R GDLL I + GAY S YN + V Q ++ R ++Q Sbjct: 365 DQLVQDAPLPEARIGDLLVIPRVGAYTYTMSSNYNRLGRPALVFVEDGQSYLAVKRESYQ 424 Query: 409 ELIELD 414 +L+ D Sbjct: 425 DLLRND 430 >gi|259503055|ref|ZP_05745957.1| diaminopimelate decarboxylase [Lactobacillus antri DSM 16041] gi|259168921|gb|EEW53416.1| diaminopimelate decarboxylase [Lactobacillus antri DSM 16041] Length = 468 Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats. Identities = 119/420 (28%), Positives = 187/420 (44%), Gaps = 14/420 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L LA TP Y + I + F F+ +D V YA KA + A Sbjct: 44 GHLMIGGCDSLDLAQQYGTPLVVYDVSRIRQQIRAFKRVFEDNQVDYAVSYASKAFAAIA 103 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + G+ +D+VS GE+ AL A P F G K+ DE+ LA+++ I V++ Sbjct: 104 MYQLADQEGAHVDVVSGGEMYTALKADFPLSHASFHGNNKSYDELVLAVKNNIGVVVVDN 163 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ LNQ L + R+ P I+A+T+K I TG+ + KFG + + A + Sbjct: 164 FYEITLLNQVLADLDAHVKVMLRITPGISAHTNKYIQTGQVDSKFGFDLESGQADRALEA 223 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L P + + G+ HIGSQI ++ F A KL+ + + + Q I+VGGG GI Sbjct: 224 VLASPRMTMVGLHAHIGSQIFELAGFEGVANKLVAVASHWQQKYDYQAQVINVGGGFGIR 283 Query: 244 YHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y +P ++ I + I +EPGR +V G + V S K Sbjct: 284 YTKADQPLRPEEFVDAIIKAIKAAVTPTALEMPAIWIEPGRSIVGPAGFNLYTVGSRKDL 343 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D +RP LY A +E L H + G CE+GD ++ ++ Sbjct: 344 PGYRPFVTVDGGMGDNIRPALYQAEYETVL-ARDPQAPLTEHVRLAGKYCESGDILSQDQ 402 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + +PGD+L + TGAYG + YN + ++ R ++++L+ LD Sbjct: 403 ALPATKPGDVLAMLDTGAYGYAMASNYNRNPRPAVVFAENGHSQLVIERESYEDLVRLDR 462 >gi|302558388|ref|ZP_07310730.1| diaminopimelate decarboxylase [Streptomyces griseoflavus Tu4000] gi|302476006|gb|EFL39099.1| diaminopimelate decarboxylase [Streptomyces griseoflavus Tu4000] Length = 463 Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats. Identities = 120/419 (28%), Positives = 192/419 (45%), Gaps = 12/419 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G L + + +LA TP Y ++ AF G D V YA KA ++AV Sbjct: 45 DGVLTVGGIDVRRLAEEFGTPAYFLDEDDFRARARSWRTAF-GDDADVFYAGKAFLSRAV 103 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ L G LD+ S GEL AL+A +PAERI F G K+ DEI A+++G+ ++S Sbjct: 104 VRWLHEEGLNLDVCSGGELATALSAGMPAERIAFHGNNKSTDEIRRAVEAGVGRIVLDSF 163 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYA 185 E+ + A LG + + R+ + A+TH+ I+T ++ KFGIP+ A Sbjct: 164 QEIVRVAHIAQELGTRQRVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRA 223 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 TL G+++ G+ HIGSQI + F A + L + +R + ID+GGGLGIAY Sbjct: 224 LTLDGLELIGIHSHIGSQIFDMSGFEVAAHRVVGLLRDIRDEHGVELPEIDLGGGLGIAY 283 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 SD P + A + + +I +EPGR +V + +V ++K Sbjct: 284 TSDDDPREPHEIAKALTEIVTRECDAARLATPRISVEPGRAIVGPTAFTLYEVGTVKPLD 343 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T + + + + +VG CE+GD + + + Sbjct: 344 GLRTYVSVDGGMSDNIRTALYDAEYSVALASRVSEAEPMLCRVVGKHCESGDIVVKDAFL 403 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDL+ + TGAY + YN + P + V + +I R T ++L+ LD Sbjct: 404 PGDLAPGDLIAVPATGAYCRSMASNYNHVVRPPVVAVRDGEARVIVRRETEEDLLRLDV 462 >gi|170289200|ref|YP_001739438.1| diaminopimelate decarboxylase [Thermotoga sp. RQ2] gi|170176703|gb|ACB09755.1| diaminopimelate decarboxylase [Thermotoga sp. RQ2] Length = 386 Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats. Identities = 131/396 (33%), Positives = 214/396 (54%), Gaps = 18/396 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L K+A + TP Y Y + K F+G++ + +A+KAN+N +++ L G G Sbjct: 4 LRKVAEIHGTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLRILREEGFG 63 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D+V++GEL A A VP+ IV++G GK+ D+++ L+ + NV+S E++ + Sbjct: 64 MDVVTKGELLAAKLAGVPSRSIVWNGNGKSRDQMEYFLREDVRIINVDSFEEMEIWKELN 123 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP+++A TH ISTG K+ KFGIP+ + S + I G+ Sbjct: 124 PEGVEYF---IRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFMER---FGSMNIRGLH 177 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +HIGSQI ++E F +AF + +++ + I++GGG GI Y + SS Sbjct: 178 VHIGSQITRVEPFVEAFNKVVRASERYG-----FEEINIGGGWGINYSGEELDLSSYR-- 230 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 ++I+E GR++VA G L+ +V+ +K+ +K FV++D MN +RP LY Sbjct: 231 -EKVVPALKRFKRVIIEIGRYIVAPSGYLLLRVVLVKRRHNKAFVVVDGGMNALIRPALY 289 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 AYH I + + AD+VGP+CE+GD IA +R++ PGD++ +E GAYG Sbjct: 290 SAYHRIFVLGKQ---GKEMRADVVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYT 346 Query: 378 QSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 S YNS E++V + +IR R T ++ + Sbjct: 347 MSNNYNSTTRPAEVLVGENGRISLIRRRETEMDIFK 382 >gi|294085433|ref|YP_003552193.1| diaminopimelate decarboxylase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665008|gb|ADE40109.1| diaminopimelate decarboxylase [Candidatus Puniceispirillum marinum IMCC1322] Length = 419 Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats. Identities = 174/422 (41%), Positives = 244/422 (57%), Gaps = 6/422 (1%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M AF + G L + + L ++A +P Y YS I Y F+ A ++ V +A+ Sbjct: 1 MCAFNRLDSGELAVDGLPLSQIAAAYDSPLYVYSGAGIRDAYRDFAAAIAPVNGKVHFAM 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANS V+ LAH G+G DIVS GEL RALAA + A IVFSGVGK+ EI+ AL + I Sbjct: 61 KANSALGVLALLAHEGAGADIVSGGELSRALAAGISASDIVFSGVGKSKAEIEQALAANI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ES +E+ ++ A S+G AP+A RVN D+NA TH KISTG+++ KFGI Q Sbjct: 121 GQINAESPAEVAMISAVAKSMGVVAPVALRVNVDVNAKTHAKISTGQRDTKFGISTDQNE 180 Query: 180 --SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 LY + P + SG+ +HIGSQ+ + F A+ L DL LR++G + +D+G Sbjct: 181 AADLYRVMAADPHITPSGLAVHIGSQLRDMAPFETAYTALLDLGMALRADGLEVPVLDLG 240 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GG+G+ Y P + Y ++ + F K EPGR +VA+ G+L+TKVI IK Sbjct: 241 GGVGVDY-DHATPTDFTAYGEMVTRIFNKSDFKFGFEPGRAIVANNGVLLTKVIFIKDGD 299 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 +K FVI+D AMND +RPTLY+A+H I ++ D ADIVGP+CETGD+I R + Sbjct: 300 NKRFVIVDAAMNDLLRPTLYEAHHSIVPVLPAGSDI--GLADIVGPVCETGDYIGRGRMM 357 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 DLL + GAYGAV + YN+R E++V H +R + T + + +SIP Sbjct: 358 PALASDDLLAVLSAGAYGAVMASAYNTRPPAGEVLVLDGAIHELRAKRTVESYLAEESIP 417 Query: 418 AW 419 + Sbjct: 418 EF 419 >gi|257126124|ref|YP_003164238.1| diaminopimelate decarboxylase [Leptotrichia buccalis C-1013-b] gi|257050063|gb|ACV39247.1| diaminopimelate decarboxylase [Leptotrichia buccalis C-1013-b] Length = 436 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 118/424 (27%), Positives = 185/424 (43%), Gaps = 15/424 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 +G+L V +L +TP Y IE AF +T + YA KA + Sbjct: 11 EKGNLSIGGVDTTELVKEFKTPLYVMDQEFIETTIDKMKKAFKSSRFNTRIAYAGKAFLS 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +IK + G LD+VS GEL A A P ++ G K ++EI++A+ GI V Sbjct: 71 TGMIKLVESKGLDLDVVSGGELYTAYKAGFPMNKVHLHGNNKLVNEIEMAVDFGIDTIVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI--HSLY 182 ++E E+ + + GKK + R++P I A+TH I T KFGI + Q + Sbjct: 131 DNEDEIDKIERICREKGKKQAVLVRIDPGIEAHTHHYIKTSGLTSKFGISLFQDNLFDII 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 + ++ G HIGSQI Q F A + +L+ + H GG Sbjct: 191 KRLNDSEWIEFKGFHTHIGSQIFQSAFFIFALDEIFKYLDKLKKELGIVVHTVNMGGGFG 250 Query: 243 AYHSDHRPPSSSD--------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 Y+ + P + Y + + ++ +EPGR +V + G + +V IK Sbjct: 251 VYYKEGDDPKPIEEVLSEIITYTEAMEIKYQIGFKELCIEPGRSIVGNAGTTLYEVGGIK 310 Query: 295 KS-ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 ++ KT+V +D M+D +R LY A +E +VN D + G +CE+GD I Sbjct: 311 ETVGGKTYVFIDGGMSDNIRTALYQAEYE-AGVVNKINDTDVKDVTLAGKLCESGDIIIE 369 Query: 354 NRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 K+ GD++ + TGAY S YN + + V + + R T +LI Sbjct: 370 KGKLPKSTEVGDIVAVTTTGAYCYTMSSNYNRMMRPAVVFVKDGKAKVAVKRETLDDLIR 429 Query: 413 LDSI 416 D I Sbjct: 430 NDEI 433 >gi|269121588|ref|YP_003309765.1| diaminopimelate decarboxylase [Sebaldella termitidis ATCC 33386] gi|268615466|gb|ACZ09834.1| diaminopimelate decarboxylase [Sebaldella termitidis ATCC 33386] Length = 435 Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 121/421 (28%), Positives = 192/421 (45%), Gaps = 14/421 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G+L + EKL TP Y IE AF + +T + YA KA Sbjct: 13 GNLEIGGIDTEKLTEEFGTPLYVMDQKLIEDTIDIMKEAFVSERFNTQIAYAGKAFLTTG 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 ++ + G LD+VS GEL A+ A P ERI G K+ +E+++A++ GI +++ Sbjct: 73 MVNLVNKKGLDLDVVSAGELYTAVKAGFPMERIHMHGNNKSDEELNMAIEYGIKEIVIDN 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AY 184 E E++ + + KK + R++P I A+TH+ I T KFG+ + Q + Sbjct: 133 EDEIEKIERICREKNKKQAVLLRIDPGIEAHTHEYIKTSGLTSKFGVSLFQENLFDIVKR 192 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKA-FKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 ++ G HIGSQI Q F A ++ + L++ G ++ +++GGG G+ Sbjct: 193 LDDSEFIEFKGFHTHIGSQIFQSAFFIFALDEIFKYLSKLKEELGIAVETVNMGGGFGVY 252 Query: 244 YHSDHRPPS-------SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y +PP Y + + + +EPGR +VA+ G + V IK++ Sbjct: 253 YAEGDQPPKLDELLKEVITYTEAMEIKYRIGFKNLYIEPGRSIVANAGTTLYTVGGIKET 312 Query: 297 -ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 KT+V +D M D +RP LY A +E I+N D + G CE+GD + N Sbjct: 313 VGGKTYVFVDGGMADNIRPALYQAKYE-AGIINKLKDEDRKEITLAGKFCESGDVLIGNA 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 K+ GD++ + TGAY S YN + V Q + R T +L+ D Sbjct: 372 KLQNAEVGDIIAVPTTGAYCYSMSSNYNRFAKPALVFVKDGQAKLAVKRETLDDLVRNDI 431 Query: 416 I 416 I Sbjct: 432 I 432 >gi|222151302|ref|YP_002560458.1| diaminopimelate decarboxylase [Macrococcus caseolyticus JCSC5402] gi|222120427|dbj|BAH17762.1| diaminopimelate decarboxylase [Macrococcus caseolyticus JCSC5402] Length = 423 Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 120/425 (28%), Positives = 193/425 (45%), Gaps = 18/425 (4%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 Y L ++ ++A TP + Y I F A G++ + YA KA Sbjct: 3 LTYINNQLTINGHNIRQIAEQYGTPLFIYDEDEIRNQCRRFHRALKASGLNYTISYASKA 62 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 ++ + + GLD+VSEGEL AL + V A ++ F G KT EI A++SG+ Sbjct: 63 FTSVQLFNLMHEEDMGLDVVSEGELYTALKSKVSASKMHFHGNNKTDREIKYAIESGVEY 122 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F ++S E++ +N A SLG+ R+NP + A+TH+ I TG+++ KFG+ I ++ Sbjct: 123 FVIDSLDEIERINDIAHSLGQTVKAVLRINPGVEAHTHEFIQTGQEDSKFGLSIRHGLAI 182 Query: 182 Y--AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++ GV HIGSQI + K +L+ + Q + +I +++GGG Sbjct: 183 EGVRQIEAASHIEFKGVHFHIGSQIFESTGTIKTIELVINWLTQHK---IDIDILNIGGG 239 Query: 240 LGIAYHSDHRPPSS----SDYASLIHQYFGNLQCK---IILEPGRFLVADVGILVTKVIS 292 I Y S+ A + I LEPGR +V + GI V +V + Sbjct: 240 FSIKYTSEDISYPIEEGIKRIAETLKNECKKHSYPVPEISLEPGRSIVGEAGITVYEVGT 299 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 +K+ D +D M+D +R LY+A +E+ + + G +CE+GD I Sbjct: 300 VKEIPDTNCYVSIDGGMSDHIRTALYNAKYELLLADRY--EIHDKEVTVAGKLCESGDII 357 Query: 352 ALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 N + + GDLL ++ TGAY S YN L + V + R + + L Sbjct: 358 MRNIMLPSSIKRGDLLVVKATGAYHYSMSSNYNQMLKPAVVFVTKDNVREVIKRQSLEHL 417 Query: 411 IELDS 415 I + Sbjct: 418 IANEI 422 >gi|227432346|ref|ZP_03914338.1| diaminopimelate decarboxylase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351867|gb|EEJ42101.1| diaminopimelate decarboxylase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 431 Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 123/427 (28%), Positives = 197/427 (46%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYA 58 M+ + L + V +LA TP Y T I K F F+ + +V YA Sbjct: 2 MTYPINEKQHLTVDGVDTIELAKTYGTPLAVYDVTLIRKTMRAFKRIFEQENVPYVVSYA 61 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + +A+ + +A D+VS GEL A+ A P + + F+G K+ DE+ +A+++G Sbjct: 62 GKAFATKAIYQVVAQENIHADVVSGGELYTAIKADFPTQHLSFNGNNKSYDELVMAVENG 121 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + +++ EL+ L++ I R++P I+A+TH+ ISTG+++ KFG + Sbjct: 122 VGTIIIDNFLELQLLSEITAEKNVIQDILLRISPGISAHTHEFISTGQQDSKFGFDLQTG 181 Query: 179 HSLYAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + AY A + + G+ HIGSQI + F K L S G + I+ Sbjct: 182 QAKQAYDIAIKDNHLHLRGLHAHIGSQIFDVTGFE---KNAALLADTAYSWGWQPEVINT 238 Query: 237 GGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 GGG GI Y + +P S +A + +I +EPGR +V G + Sbjct: 239 GGGFGIRYTDEDQPLPESKFADAIIRVLKEKATQYDWAMPEIWIEPGRSIVGPAGQTLYT 298 Query: 290 VISIKKSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V S K + ++ +D M D +RP LY A +E N + I G CE+G Sbjct: 299 VGSRKDIPGIRNYLAVDGGMGDNIRPALYQANYEAVL-ANQPNAKSEEIVRIAGKYCESG 357 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + ++ +PGD+L + TGAYG + YN + V Q ++ R TF+ Sbjct: 358 DVLVWQEELPATKPGDVLSVLATGAYGYAMASNYNRNPRPAVVFVENGQHQVVVERETFE 417 Query: 409 ELIELDS 415 +I LD Sbjct: 418 HIISLDQ 424 >gi|116617779|ref|YP_818150.1| diaminopimelate decarboxylase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096626|gb|ABJ61777.1| diaminopimelate decarboxylase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 430 Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 123/427 (28%), Positives = 197/427 (46%), Gaps = 16/427 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYA 58 M+ + L + V +LA TP Y T I K F F+ + +V YA Sbjct: 1 MTYPINEKQHLTVDGVDTIELAKTYGTPLAVYDVTLIRKTMRAFKRIFEQENVPYVVSYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + +A+ + A D+VS GEL A+ A P + + F+G K+ DE+ +A+++G Sbjct: 61 GKAFATKAIYQVAAQENIHADVVSGGELYTAIKADFPTQHLSFNGNNKSYDELVMAVENG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL+ L++ I R++P I+A+TH+ ISTG+++ KFG + Sbjct: 121 VGTIIVDNFLELQLLSEITAEKNVIQDILLRISPGISAHTHEFISTGQQDSKFGFDLQTG 180 Query: 179 HSLYAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + AY A + + G+ HIGSQI + F K L S G + I+ Sbjct: 181 QAKQAYDIAIKDNHLHLRGLHAHIGSQIFDVTGFE---KNAALLADTAYSWGWQPEVINT 237 Query: 237 GGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 GGG GI Y + +P +++A + +I +EPGR +V G + Sbjct: 238 GGGFGIRYTDEDQPLPENEFADAIIRVLKEKATQYDWAMPEIWIEPGRSIVGPAGQTLYT 297 Query: 290 VISIKKSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V S K + ++ +D M D +RP LY A +E N + I G CE+G Sbjct: 298 VGSRKDIPGIRNYLAVDGGMGDNIRPALYQANYEAVL-ANQPNAKSEEIVRIAGKYCESG 356 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + ++ +PGD+L + TGAYG + YN + V Q ++ R TF+ Sbjct: 357 DVLVWQEELPATKPGDILSVLATGAYGYAMASNYNRNPRPAVVFVENGQHQVVVERETFE 416 Query: 409 ELIELDS 415 +I LD Sbjct: 417 HMISLDQ 423 >gi|227509663|ref|ZP_03939712.1| diaminopimelate decarboxylase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190879|gb|EEI70946.1| diaminopimelate decarboxylase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 435 Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 99/419 (23%), Positives = 167/419 (39%), Gaps = 12/419 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQA 66 G L L +TP Y +AI F F+ +D V YA KA + A Sbjct: 14 GHLEIGGADALDLVKKYKTPLVVYDVSAIRNQIHHFQKVFEDNHVDYAVSYASKAFACIA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + +D+VS GEL A+ A P + + F G K+++E+++A+ I +++ Sbjct: 74 MFQLVNQENVHIDVVSGGELYTAIKAGFPMDHVSFHGNNKSVEELEMAVDHQIGVIILDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ L Q + RV P ++A+TH+ TG+ + KFG + + A Sbjct: 134 FHEIALLKQILKDKDAHINVMLRVTPGVSAHTHEYDQTGQTDSKFGFDLQSGQARKALDE 193 Query: 187 TLPGVKISGVDMHIGSQIDQIE---SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L +++ + +H E A KL+ + Q + G+ + ++VGGG GI Sbjct: 194 VLADQRMTMLGIHAHIGSQIFEVKGFELAATKLIDTVGQWHKEIGYVAKVVNVGGGFGIR 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P + + I + + +EPGR + G + V S K Sbjct: 254 YTEEDDPIAPEMFVDAIVKAIKKRAGELALPMPAVWIEPGRSIAGPAGYNLYTVGSRKDV 313 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + + N + G CE+GD + + Sbjct: 314 PGIRSYVTVDGGMGDNIRPALYQAEYDAVLANDPKAPAKETVRVAGKYCESGDILIQKQA 373 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + +PGD+L + TGAYG + YN I V Q ++ R TF++LI LD Sbjct: 374 LPQTKPGDVLAMLATGAYGYAMASNYNRNPRPAVIFVENGQDNLAIRRETFEDLIRLDQ 432 >gi|302529808|ref|ZP_07282150.1| diaminopimelate decarboxylase [Streptomyces sp. AA4] gi|302438703|gb|EFL10519.1| diaminopimelate decarboxylase [Streptomyces sp. AA4] Length = 479 Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 113/435 (25%), Positives = 187/435 (42%), Gaps = 28/435 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V + LA TP + + ++ AFD +V YA KA + V Sbjct: 46 DGVVRIAGVDVRDLAQTYGTPLFVVDEADFKSRCADYAEAFDD-PALVHYASKAFLSVEV 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ S GEL AL A P ERI F G K++ E+D A+++G+ V+S Sbjct: 105 ARWVAEQGLSLDVCSGGELAVALRANFPVERITFHGNNKSVAELDAAVEAGVGTVVVDSY 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYA 185 E+ L + A + + + RV + A+TH+ I+T ++ KFG + Sbjct: 165 YEIARLAEIAAAHEIEQKVLVRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRV 224 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD-----LTQQLRSNGHNIQHIDVGGGL 240 P +K+ G+ HIGSQI + F A + + + + +D+GGG Sbjct: 225 LNAPSLKLVGLHSHIGSQIFDADGFEVAARRVVGLLADLAKEHGPELLEQMNVVDLGGGF 284 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKV--- 290 GIAY PP S + I + +I EPGR + + +V Sbjct: 285 GIAYTEKDNPPPPSQMITQIREIVRKECAYAELPVPRIAGEPGRAIAGPGTFTLYEVGTI 344 Query: 291 --ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD-------RLHIHADIV 341 +++ + +V +D M+D +R LYDA ++ + A D + +V Sbjct: 345 KDVALGDETARRYVSVDGGMSDNIRTALYDAVYDCRVVSRSASDTADGDDPATPTLSRVV 404 Query: 342 GPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHI 400 G CE+GD + + + PGDLL + TGAY + YN + V + Sbjct: 405 GKHCESGDIVVRDCWLPDTLAPGDLLAVAATGAYCYAMASGYNRLPRPAVVAVRNGSARL 464 Query: 401 IRPRMTFQELIELDS 415 + R T +++ L+ Sbjct: 465 LLRRETTDDMLRLEV 479 >gi|328885052|emb|CCA58291.1| Diaminopimelate decarboxylase [Streptomyces venezuelae ATCC 10712] Length = 463 Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 119/407 (29%), Positives = 188/407 (46%), Gaps = 12/407 (2%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA TP Y T ++ AF G D V YA KA ++AV++ L G LD Sbjct: 57 ALAEEFGTPAYFLDETDFRARCRAWAEAF-GKDADVFYAGKAFLSRAVVRWLKEEGLNLD 115 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 + S GEL AL+A +PAERI F G K+ EI A+++G+ ++S E+ + A S Sbjct: 116 VCSGGELATALSAGMPAERIAFHGNNKSEAEIRRAVEAGVGRIVLDSFQEIVRVAHIAQS 175 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYASTLPGVKISGVD 197 LGK+ + RV + A+TH+ I+T ++ KFGI + A L G+++ G+ Sbjct: 176 LGKRQRVQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRRALKLDGLELIGIH 235 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 HIGSQI + F + + + L ++R + ID+GGGLGIAY S+ P + Sbjct: 236 SHIGSQIFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEI 295 Query: 257 ASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 A + + +I +EPGR +V + +V ++K + Sbjct: 296 AKALGEIVTRECESAGLATPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGM 355 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYI 368 T +V+ D + + +VG CE+GD + + + PGDL+ + Sbjct: 356 SDNIRTALYDAEYSVSLVSRTSDAAPMLSRVVGKHCESGDIVVRDAFLPSDLAPGDLIAV 415 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 TGAY + YN P + V + +I R T ++L+ LD Sbjct: 416 PATGAYCRSMASNYNHAQRPPVVAVRDGEARVIVRRETEEDLLRLDV 462 >gi|209545489|ref|YP_002277718.1| diaminopimelate decarboxylase [Gluconacetobacter diazotrophicus PAl 5] gi|209533166|gb|ACI53103.1| diaminopimelate decarboxylase [Gluconacetobacter diazotrophicus PAl 5] Length = 452 Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 164/427 (38%), Positives = 238/427 (55%), Gaps = 6/427 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALK 60 + +G L E+V L +A V TP + + Y + A + +A+K Sbjct: 26 SMHALDG-LVFEDVPLNAIADAVGTPTWVMGAGTLRARYRRLAGALRDAGLAPSIHFAVK 84 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN + AV++ LA G+G D+VS GELRRA AA +PA IVFSGVGK+ DE+ LA+ GI Sbjct: 85 ANDHLAVLRILAAEGAGADVVSGGELRRARAAGIPAAGIVFSGVGKSRDELHLAVTEGIA 144 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 VES EL ++ AV+ G+ A I RVNPD++A TH+KI+TG +KFGI + Sbjct: 145 HIAVESAEELDVVSDVAVAAGRTARITLRVNPDVDAGTHEKITTGLSTNKFGIAYARAAD 204 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA A+ LPG+ G +HIGSQI + + AF + DL + +R+ G ++ +D GGGL Sbjct: 205 LYARAAALPGLHPLGFSVHIGSQIVAMAPYRAAFARVADLVRAVRARGLSVGLVDCGGGL 264 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-- 298 GI Y + + A I G+L ++ +EPGR+L G+L+++VI K D Sbjct: 265 GIRYRDEVEG-APMALAGAIRAELGDLDVRLAIEPGRWLAGPAGVLLSRVILRKAGQDGL 323 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 F+ILD AMND RP+LYD++H I + + ++VGP+CE+ D A R + Sbjct: 324 PPFLILDAAMNDLARPSLYDSWHGILPLSARDAVQPVESVNVVGPVCESADSFATGRMLP 383 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 G + + TGAYG V S TYN R L +++V+G ++ +IR R + L D +P Sbjct: 384 RMGDGAAVALLDTGAYGMVMSSTYNGRPLAAQVLVDGGRWSVIRARQPVESLWAADRVPD 443 Query: 419 WLQKTPK 425 WL P Sbjct: 444 WLAPQPV 450 >gi|271966878|ref|YP_003341074.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021] gi|270510053|gb|ACZ88331.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021] Length = 451 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 106/410 (25%), Positives = 175/410 (42%), Gaps = 6/410 (1%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G LH + + +LA TP Y + + +A D V Y KA V Sbjct: 42 GGELHIGGIGVRELAAEFGTPAYLLDEEEFQARCAEWRDALP--DGEVHYGGKAFLCPEV 99 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ L G LD+ + GEL A+A + R+VF G K+ E+ A+ G+ C V+S Sbjct: 100 VRWLDAAGLCLDVCTGGELAVAVAGGMDPARVVFHGNNKSFAELRRAVTWGVGCVVVDSF 159 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 +E++ L A G + + RV P + A+TH+ I+TG + KFG ++ + A Sbjct: 160 AEIERLALLAGEAGVRQRVMIRVTPGVEAHTHEFIATGGDDSKFGFSLNAGLAAEAVRRV 219 Query: 188 LPGV--KISGVDMHIGSQIDQIESF-HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 L +++G+ HIGSQI + F A ++ L R +G I +D+GGGLGI Y Sbjct: 220 LAAASLELTGLHSHIGSQITDLGGFTLAARRMAAFLLACEREHGVTIPKLDLGGGLGIVY 279 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 P + ++ +EPGR + + + +V ++K+ + Sbjct: 280 RPGDPVPPRPAEVVAALREAVPAHLRLAVEPGRSIAGPTAVALYEVGTVKEIPGVNTYVS 339 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPG 363 + + + D +VG CE+GD + + + RPG Sbjct: 340 VDGGMSDNPRPAMYGAAYTALLASRSSDAPLREVTVVGKHCESGDVLVRDLPLPADVRPG 399 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 DLL I +GAY + YN P + V ++ R T ++L+ L Sbjct: 400 DLLAIPASGAYQRSMASNYNHVTRPPVVAVRDGSARVVVRRETEEDLLRL 449 >gi|302554157|ref|ZP_07306499.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM 40736] gi|302471775|gb|EFL34868.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM 40736] Length = 463 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 124/419 (29%), Positives = 194/419 (46%), Gaps = 12/419 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + + + +LA TP Y + AF G D V YA KA ++AV Sbjct: 45 DGVVTVGGIPVTRLAEEFGTPAYVLDEADFRARARAWRTAF-GQDADVFYAGKAFLSRAV 103 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ L G +D+ S GEL AL+A +PAERI F G K++DEI A+++G+ ++S Sbjct: 104 VRWLHEEGLNVDVCSGGELATALSAGMPAERIAFHGNNKSVDEITRAVEAGVGHIVLDSF 163 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYA 185 E+ + A LGK+ + R+ + A+TH+ I+T ++ KFGIP+ A Sbjct: 164 QEIVRVAHIAQGLGKRQKVLIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRA 223 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L G+++ G+ HIGSQI + F A + L + +R + ID+GGGLGIAY Sbjct: 224 LQLDGLELVGIHSHIGSQIFDMSGFEVAAHRVVSLLKDVRDEHGVELPEIDLGGGLGIAY 283 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 SD P + A + + +I +EPGR +V + +V +IK Sbjct: 284 TSDDDPREPHEIAKSLTEIVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLD 343 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T +V+ D + A +VG CE+GD + + + Sbjct: 344 GLRTYVSVDGGMSDNIRTALYDAEYSVALVSRTSDAAPMLARVVGKHCESGDIVVKDAFL 403 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGDL+ + TGAY + YN L P + V G + I R T ++L+ LD Sbjct: 404 PADVAPGDLVAVPATGAYCRSMASNYNHVLRPPVVAVQGGEARAIVRRETEEDLLRLDV 462 >gi|227522833|ref|ZP_03952882.1| diaminopimelate decarboxylase [Lactobacillus hilgardii ATCC 8290] gi|227090005|gb|EEI25317.1| diaminopimelate decarboxylase [Lactobacillus hilgardii ATCC 8290] Length = 435 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 99/419 (23%), Positives = 167/419 (39%), Gaps = 12/419 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQA 66 G L L +TP Y ++I F F+ +D V YA KA + A Sbjct: 14 GHLEIGGADALDLVKKYKTPLVVYDVSSIRNQIHHFQKVFEDNHVDYAVSYASKAFACIA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + + +D+VS GEL A+ A P + + F G K+++E+++A+ I +++ Sbjct: 74 MFQLVNQENAHIDVVSGGELYTAIKAGFPMDHVSFHGNNKSVEELEMAVDHQIGVIILDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ L Q + RV P ++A+TH+ TG+ + KFG + + A Sbjct: 134 FHEIALLKQILKDKDAHINVMLRVTPGVSAHTHEYDQTGQTDSKFGFDLQSGQARKALDE 193 Query: 187 TLPGVKISGVDMHIGSQIDQIE---SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L +++ + +H E A KL+ L Q + G+ + ++VGGG GI Sbjct: 194 VLADQRMTMLGIHAHIGSQIFEVKGFELAATKLIDTLGQWHKEIGYVAKVVNVGGGFGIR 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y P + + I + + +EPGR + G + V S K Sbjct: 254 YTEKDDPIAPEMFVDAIVKAIKKRARELALPMPAVWIEPGRSIAGPAGYNLYTVGSRKDV 313 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + + N + G CE+GD + + Sbjct: 314 PGIRSYVTVDGGMGDNIRPALYQAEYDAVLANDPKAPAKETVRVAGKYCESGDILIQKQA 373 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + +PGD+L + TGAYG + YN I V Q ++ R TF++LI LD Sbjct: 374 LPQTKPGDVLAMLATGAYGYAMASNYNRNPRPAVIFVENGQDNLAIRRETFEDLIRLDQ 432 >gi|307243459|ref|ZP_07525615.1| diaminopimelate decarboxylase [Peptostreptococcus stomatis DSM 17678] gi|306493183|gb|EFM65180.1| diaminopimelate decarboxylase [Peptostreptococcus stomatis DSM 17678] Length = 431 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 118/421 (28%), Positives = 189/421 (44%), Gaps = 14/421 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 +G L V L +P + Y I F G+D + YA KA + Sbjct: 12 KGHLEIGGVDTCSLVDKYGSPLFVYDEGLIRDQCRRFHKVLSKSGLDYHISYASKAFICK 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ + GLD+VS GEL AL+ +++I G KT EI AL+S I CF V+ Sbjct: 72 ELVRIMKEEDMGLDVVSVGELYNALSVDFDSQKIHLHGNNKTEYEIGYALESNIGCFVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--A 183 S +E++ +++ A +GK+A RV P + A+TH+ I+TG + KFG+ I + Sbjct: 132 SLAEVERIDRIAGEMGKRAKALLRVTPGVEAHTHEFITTGNTDSKFGLNIDNGQAREGVE 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGI 242 + + G+ HIGSQI E A K + + L+ + + +++GGG GI Sbjct: 192 AILRAENIDLIGLHFHIGSQIFGTEGSQAAIKKVFVWLKDLKEDLDFEAKILNIGGGFGI 251 Query: 243 AYHSDHRPPSSSD-----YASLIHQYFGNL--QCKIILEPGRFLVADVGILVTKVISIKK 295 Y + D A L ++ LEPGR +V + G + +V +IK+ Sbjct: 252 RYTDEDVSYPIEDALEEIIACLKESARSQGLAIPQLWLEPGRSIVGEAGYTLYRVGTIKE 311 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M D +R LY A +E + N + I G CE+GD IA + Sbjct: 312 IPGVRTYVSIDGGMTDHIRTALYGAKYE-VALANRMNEEDASLVTIAGKCCESGDLIAKD 370 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 +I + GD+L + TGAY + YN + V + I+ R + ++LI+ Sbjct: 371 VRIPEAKIGDILVVACTGAYHYSMASNYNLMQKPAVVFVGDGKDKIVIKRESLEDLIKNQ 430 Query: 415 S 415 Sbjct: 431 V 431 >gi|33861646|ref|NP_893207.1| diaminopimelate decarboxylase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634223|emb|CAE19549.1| Diaminopimelate decarboxylase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 457 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 126/427 (29%), Positives = 200/427 (46%), Gaps = 12/427 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 E L SLE L +P Y + + + A + ++ YA KANS+ Sbjct: 31 EHKLFIGECSLEDLVSKYDSPLYVLDEITLRNSCKAYKKALEKYYPGPSLPIYASKANSS 90 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + +A G GLD VSEGEL AL VP E+IVF G K+ EI+ A++ V Sbjct: 91 IFMSNLIASEGFGLDAVSEGELLTALKGGVPNEKIVFHGNNKSDKEIEFAIK-NNIKVIV 149 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +++ +LK L + + S I R P I +TH+ I TG + KFG I + L+ Sbjct: 150 DNDHDLKRLEEISNSFNHDIEIMVRFTPGIECHTHEYIRTGSFDSKFGFGIESLGRLFEV 209 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 S +K++G+ HIGSQI +++ + K++ D+ Q + GHNI+ ++VGGGLGI Y Sbjct: 210 ISKTKHIKLTGLHAHIGSQIFELDPHNDLGKIMVDVILQAKDFGHNIKELNVGGGLGIKY 269 Query: 245 HSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + PPS ++ + ++ EPGR +V+ G+ + K+ S K+ Sbjct: 270 TEEDDPPSIDEWIKTVSLSVVKACDKNNLNLPILMCEPGRSIVSTAGVTIYKIGSFKEIP 329 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +D M+D RP Y + + + NP + G CE+GD + + Sbjct: 330 GIRTYLSVDGGMSDNPRPITYQSKYSACLVNNPLNSNSKNKYTVAGKHCESGDVLFKELE 389 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + + GDL+ + TGAY S YN I+V + II+ R + +L++ D + Sbjct: 390 LGDCKTGDLICVFGTGAYNNSMSSNYNRIPKPAAILVCNGEAEIIQKRESPHDLLKYDVL 449 Query: 417 PAWLQKT 423 P K Sbjct: 450 PDRFIKQ 456 >gi|169351658|ref|ZP_02868596.1| hypothetical protein CLOSPI_02439 [Clostridium spiroforme DSM 1552] gi|169291880|gb|EDS74013.1| hypothetical protein CLOSPI_02439 [Clostridium spiroforme DSM 1552] Length = 435 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 101/424 (23%), Positives = 167/424 (39%), Gaps = 14/424 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKAN 62 + +L+ + + L TP Y S I + + T +T+ +A K+ Sbjct: 9 QIKNNNLYIDEIKATDLVEKYGTPLYVMSEGHIRQQFNTLKTKMLEKYENTLPLFASKSF 68 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S A+ K G G+D VS GE+ AL A ++I F G K EI+ AL G+ Sbjct: 69 SCLAIYKIAKEYGIGIDCVSAGEISIALKAGFDPKKIYFHGNNKLPSEIEYALSHGVENL 128 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS-- 180 +++ E++ + + A L R+ P + A H I G K+ KFG H Sbjct: 129 VIDNFYEIELVQEIAKKLNIVVNGVIRITPGVYAGGHDYIRVGAKDTKFGFSSHDNTYLK 188 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + G+ H+GSQI++I+++ A D+ ++ + GG Sbjct: 189 AIKKVIDASNINFDGIHCHVGSQIEEIQAYVLAMNKFVDIAYEIYDIFGITINKLNAGGG 248 Query: 241 GIAYHSDHRPPSSSDYASLIHQ--------YFGNLQCKIILEPGRFLVADVGILVTKVIS 292 ++ P + + +++EPGR+ V + GI + V S Sbjct: 249 FGICYTKADKPLEFELVVDTIMDIITKGFEARNLKRPMVLVEPGRYCVGNAGITLYTVGS 308 Query: 293 IKKSADKTFVIL-DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 K D I D M D +R +LY A ++ + G CE+GD + Sbjct: 309 YKNIKDIRDYISVDGGMTDNIRSSLYAAKYDAIIANKAEMPADR-LVTVAGKNCESGDIL 367 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + P+PGD+L + TGAY S YN + + + R TF +LI Sbjct: 368 IKDIMLQDPKPGDILAMFSTGAYHYTMSSNYNQLPKPAVVFTYKGKSREVIRRQTFDDLI 427 Query: 412 ELDS 415 D Sbjct: 428 YYDI 431 >gi|282855373|ref|ZP_06264697.1| diaminopimelate decarboxylase [Pyramidobacter piscolens W5455] gi|282586794|gb|EFB92038.1| diaminopimelate decarboxylase [Pyramidobacter piscolens W5455] Length = 436 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 115/429 (26%), Positives = 182/429 (42%), Gaps = 10/429 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 L LA TP Y T + S A G + VCYA KA N A+ Sbjct: 4 NHLIWGGCDTVDLAGRYGTPLYVMDETMLRDRCRRLSAAVAGRNARVCYAGKAFLNVAMA 63 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G LD VS GE R A AA P ER+ G KT + L+ G+ V+SE Sbjct: 64 RLVDEEGLCLDTVSPGEFRIACAAGFPMERVTLHGNAKTEAFLAAGLERGVGTVAVDSED 123 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 EL L + G + I R++P I A+TH+ I T +K+ KFG+P+ + +A Sbjct: 124 ELALLARLCAKRGARQKILLRLSPGIEAHTHRFIQTAQKDCKFGVPLAHLERAVRFALGA 183 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAYHSD 247 G+ ++G+ +H+GSQI + ++ +A + ++ + LR G + +D+GGG GI Sbjct: 184 TGLDLAGLHVHVGSQIRDVGTYLQAADRMTEIMRSLREATGFAARELDLGGGFGIPERPG 243 Query: 248 HRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADKT 300 + + + I ++ EPGR++ + GI + V +K+ Sbjct: 244 AAGAPAERFVAAILDRVDARCAELRLARPEVAFEPGRWVAGEAGITLYTVQGVKEIPGVR 303 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 + + N + A I GP CETGD + L+ + Sbjct: 304 TYVAVDGGMTDNPRPQLYQAEYGVRLANDTERPANRRAAIAGPCCETGDVLTLDTPVPEL 363 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 R GD+L + TGAY TYN L I Q + R T EL+ + W Sbjct: 364 RRGDVLAVPLTGAYNYSMFSTYNCALRPAVIFARDGQARVAVRRQTLDELLNGQT--DWA 421 Query: 421 QKTPKQSSE 429 + +++++ Sbjct: 422 ENPRRRAAD 430 >gi|326382075|ref|ZP_08203768.1| diaminopimelate decarboxylase [Gordonia neofelifaecis NRRL B-59395] gi|326199501|gb|EGD56682.1| diaminopimelate decarboxylase [Gordonia neofelifaecis NRRL B-59395] Length = 473 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 120/430 (27%), Positives = 193/430 (44%), Gaps = 22/430 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + VS+E+LA TP + Y +AF G V YA KA + V Sbjct: 46 GVVTIGGVSVEQLAEEYGTPLFVYDEADFRSRCADMQSAF-GPYGRVHYASKAFLSTQVA 104 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 K + G LD+ S GEL AL A P ERI G K E+ AL +G+ ++S Sbjct: 105 KWIESEGLSLDVCSGGELAIALRAGFPPERIALHGNNKAESELAAALDAGVGDIVLDSMV 164 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAYAS 186 E++ L++ A G A + RV P + A+TH+ IST ++ KFG + Sbjct: 165 EIERLDRLAGERGVVADVLVRVTPGVEAHTHEFISTAHEDQKFGFALAGGVALDAVRAVF 224 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI +I+ F A + + + + I+ +D+GGGLG Sbjct: 225 AADNLRLVGLHSHIGSQIFEIDGFELAARRVIGLLADVVAEFGVEKTKQIKVLDLGGGLG 284 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKV---- 290 I+Y PP S A + + I +EPGR + G+ + +V Sbjct: 285 ISYLESDDPPPVSVLAEALVEIVRRESESLNLPMPMIAVEPGRGIAGPAGVTLYRVGTVK 344 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 +++ + + +V +D M+D +R LYDA ++ + + + + +VG CE+GD Sbjct: 345 DVALDGNTVRRYVSVDGGMSDNIRTVLYDAEYD-VRLASRVSEAKAVVCRVVGKHCESGD 403 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + + PGDLL + TGAY S YN VN + ++ R T + Sbjct: 404 IVIRDCWLPEDLAPGDLLVVGATGAYCYSMSSRYNMVPRAAVATVNDGRARLMLRRETVE 463 Query: 409 ELIELDSIPA 418 + + L+ P Sbjct: 464 DFLSLEVDPE 473 >gi|28378400|ref|NP_785292.1| diaminopimelate decarboxylase [Lactobacillus plantarum WCFS1] gi|300767341|ref|ZP_07077253.1| diaminopimelate decarboxylase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180552|ref|YP_003924680.1| diaminopimelate decarboxylase [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271235|emb|CAD64140.1| diaminopimelate decarboxylase [Lactobacillus plantarum WCFS1] gi|300495160|gb|EFK30316.1| diaminopimelate decarboxylase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046043|gb|ADN98586.1| diaminopimelate decarboxylase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 441 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 126/427 (29%), Positives = 190/427 (44%), Gaps = 17/427 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQA 66 L V LA QTP Y Y T AI F F+ +D + YA KA + A Sbjct: 14 HHLMVGGVDTLTLAKKYQTPLYVYDTGAIRAEIAAFKQVFEENHVDYQISYASKAFATVA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + +A D+VS GEL A A P + F G K++ E+ +AL +G+ V++ Sbjct: 74 MYQLIAQEHIHCDVVSGGELYTAQQADFPMAAVSFHGNNKSLAELTMALDAGVGTIVVDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY-- 184 EL+ L + I R+ P I+A+TH ISTG+ + KFG + + A Sbjct: 134 FGELRQLTTLTTQRQQPTTIMLRIAPGISAHTHDYISTGQADSKFGFDLDSGQADQAIKA 193 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIA 243 A P +K+ G+ HIGSQI ++ F L + R Q ++VGGG G+ Sbjct: 194 AQAAPYLKLVGIHCHIGSQIFEVNGFEMIVDKLVSEFARWQRELDFYPQIMNVGGGFGVK 253 Query: 244 YHSDHRPPSSSDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y ++ P +D+ I + +I +EPGR LVA G+ + + K Sbjct: 254 YTAEDHPLQPTDFVDAIIKETRAQTAAQQVPMLEIWIEPGRSLVATAGMTLYTIGDEKDI 313 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D +RP LY A +E NPA + A I G CE+GD + N+ Sbjct: 314 PGIRKYLSVDGGMGDNIRPALYQAKYEAVLAKNPALPAEQV-ASIAGKYCESGDMLIWNQ 372 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD- 414 ++ PGD+L + TGAYG + YN + ++ R ++ +L LD Sbjct: 373 QLPATAPGDVLAVLDTGAYGYSMASNYNRNPRPAVVFCEQGHSQLVVQRESYADLTRLDL 432 Query: 415 --SIPAW 419 S+P Sbjct: 433 PLSVPEK 439 >gi|159029858|emb|CAO90912.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 467 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 107/425 (25%), Positives = 172/425 (40%), Gaps = 16/425 (3%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQAV 67 L + L +P Y + + F ++ V YA KA + AV Sbjct: 41 LEIGGCDVTTLVERFGSPLYIVDEVTLRTACGQYLQGFQTHYPGESRVIYASKAWNCLAV 100 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERI----VFSGVGKTIDEIDLALQSGIYCFN 123 +A G G D+VS GE+ L A + + F G K+I E++ A++ Sbjct: 101 SAVVASEGLGFDVVSAGEIHTVLTALDQSNKTDVPIYFHGNNKSIAELEYAIEHNCIIIV 160 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 + P+ R+ P I +TH+ I TG + KFG HQI +++ Sbjct: 161 DNWLELENLVKLGENRPDTPIPVLLRLTPGIECHTHEYIRTGHLDSKFGFDPHQIEAVFD 220 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 Y P + G+ HIGSQI + + +L D + G ++ ++VGGGLGI Sbjct: 221 YVLAHPVLNCLGLHAHIGSQIFERQPHQDLAAVLADWFKLGLERGLPLEQLNVGGGLGIR 280 Query: 244 YHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y PPS ++ Q G +I EPGR L+A + V + K+ Sbjct: 281 YLESDDPPSIEEWVQAVSLAVAKACQERGIAYPLLIAEPGRSLIATACVTAYTVGNRKEI 340 Query: 297 ADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + I +D M+D RP Y + + + + I G CE+GD + + Sbjct: 341 PEIRTYIAVDGGMSDNPRPITYQSVYRAVVANKMSQEC-QELVTIAGKHCESGDILIKDI 399 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + PGD+L + TGAY + YN ++V + ++I R +L+ D Sbjct: 400 ALPKTNPGDILVVLATGAYNYSMASNYNRLPRPAAVIVQNGEANLILERENLADLLRQDR 459 Query: 416 IPAWL 420 +P L Sbjct: 460 LPNRL 464 >gi|262038388|ref|ZP_06011765.1| diaminopimelate decarboxylase [Leptotrichia goodfellowii F0264] gi|261747606|gb|EEY35068.1| diaminopimelate decarboxylase [Leptotrichia goodfellowii F0264] Length = 435 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 115/423 (27%), Positives = 179/423 (42%), Gaps = 14/423 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 +G+L V LA +TP Y IE AF DT + YA KA Sbjct: 11 EKGNLSIGGVDTNDLAKEFETPLYVMDQELIETTIDKMKKAFVSSRFDTHIAYAGKAFFT 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + K + LD+VS GEL A A P +++ G K+ +E+++A+ I + Sbjct: 71 TGMAKIIEAKDLELDVVSGGELYTAYKAGFPMDKVHMHGNNKSYEELEMAIDLEIKQIVI 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI--HSLY 182 ++E E+ + + KK + R++P I A+TH I T KFGI + Q + Sbjct: 131 DNEDEIGKIEKICKEKNKKQAVLLRIDPGIEAHTHHYIKTSGLTSKFGISLFQKDLLDII 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 + ++ G HIGSQI Q F A + + +L+ + H GG Sbjct: 191 KRINDSEYLEFRGFHTHIGSQIFQSIFFIFALEEIFKYLDKLKKELGIVVHTVNMGGGFG 250 Query: 243 AYHSDHRPP--------SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 Y+ + P Y + + ++ +EPGR +V + G + +V IK Sbjct: 251 VYYKEGDDPVPVEEVLKEIITYTEAMEIKYKIGFKELCIEPGRSIVGNAGTTLYEVGGIK 310 Query: 295 KS-ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K+ KT+V ++ M D +RP LY A +E + + + G CE+GD + Sbjct: 311 KTVGGKTYVFVNGGMADNIRPALYQAEYEAGITNKLDKEATNE-VTVAGKFCESGDILIE 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 KI GD+L I TGAY S YN + V + + R TF++LI Sbjct: 370 KTKIQEAHVGDILAITTTGAYCYTMSSNYNRFAKPAVVFVKDGKAKLAVKRETFEDLIRN 429 Query: 414 DSI 416 D I Sbjct: 430 DEI 432 >gi|296138956|ref|YP_003646199.1| diaminopimelate decarboxylase [Tsukamurella paurometabola DSM 20162] gi|296027090|gb|ADG77860.1| diaminopimelate decarboxylase [Tsukamurella paurometabola DSM 20162] Length = 453 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 122/438 (27%), Positives = 190/438 (43%), Gaps = 31/438 (7%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + VS LA TP + +AF G D V YA KA + + Sbjct: 18 DGGVSVAGVSARALAEEFGTPLFVIDEDDFRDRCRAMRDAF-GDDAAVHYASKAFLSMEI 76 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LD+ S GEL AL A PA+RI G K++ E+D A+ SGI ++S Sbjct: 77 ARWVRDEGLNLDVCSGGELAIALRAGFPADRIALHGNNKSVAELDYAVASGIGHIVIDSL 136 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI------HQIHSL 181 SE+ L+ A G + R+ P + A+TH+ IST ++ KFG + Sbjct: 137 SEIARLDAIAGERGSVQDVLIRLTPGVEAHTHEFISTAHEDQKFGFSLASNEGDSPAMRA 196 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDV 236 +++ G+ HIGSQI ++ F A + + +T+ + ID+ Sbjct: 197 VTAVFEADNIRLVGLHSHIGSQIFDVDGFEIAARRVLELLRDIVTRFGAEKTAQLNTIDL 256 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTK 289 GGGLGIAY + PP +D A+ + + +EPGR + GI + + Sbjct: 257 GGGLGIAYTAADDPPPVADLAAKLRNIVETESAALGLQTPHLAVEPGRAIAGPPGITLYE 316 Query: 290 V----------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 V + A + +V +D M+D +RP LY A + I + + + + Sbjct: 317 VGTIKDVVLDGKDERDPAFRRYVSVDGGMSDNIRPALYGAEY-TVAIADRDPEGAPVPSR 375 Query: 340 IVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQF 398 IVG CETGD + + GDLL + TGAY S YN + + V Sbjct: 376 IVGKHCETGDILVRDTTTPDGLAEGDLLAVAATGAYCYSMSSRYNMQPRPAVVAVKDGAA 435 Query: 399 HIIRPRMTFQELIELDSI 416 +I R T +L+ L+ + Sbjct: 436 RLILRRETVDDLVSLEVL 453 >gi|307594424|ref|YP_003900741.1| diaminopimelate decarboxylase [Vulcanisaeta distributa DSM 14429] gi|307549625|gb|ADN49690.1| diaminopimelate decarboxylase [Vulcanisaeta distributa DSM 14429] Length = 400 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 120/406 (29%), Positives = 184/406 (45%), Gaps = 14/406 (3%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 +SL +LA TP Y +E+NY A V Y++KAN N A++ L L Sbjct: 9 GISLMELADRFGTPLIVYDLGRVEENYRVIKEA---TGARVLYSIKANPNLAILTFLRKL 65 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 GSG D S GE+ AL A I+++G ++I++I + +G+ + L+ Sbjct: 66 GSGADAASPGEIFLALKAGFEPGNILYTGAFRSINDIKYGIDAGVIFNFDSRREFERALS 125 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + +E KFG+ + Y A + + Sbjct: 126 LGYKPKTAFFRVDLGYGRGFAPG----VVLAGEESKFGMFLDDAVEAYRLARDVGVGEFG 181 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 M + +D A L G I++ D+GGG GI Y D +P Sbjct: 182 IHAMMGSNVLDADYFIKIAELLKEYAEAIEDRVGIRIRYFDMGGGFGIPYRPDEKPLDLG 241 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 L + + G ++ +EPGRF+V + G LVT+V +K+ +TFV +DV MN +RP Sbjct: 242 RLGVLRNFFPG----ELWVEPGRFIVGNAGYLVTRVTEVKRKGGRTFVGVDVGMNVLIRP 297 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 LY AYH I N + D+VGPICE D +A+ R++ R GDLL I GAY Sbjct: 298 MLYGAYHHIITCSN---NEEREVVDVVGPICENTDKLAIGRELPRVREGDLLIILNAGAY 354 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 SG YN R E++V G+++ I R R + + L+ IP+++ Sbjct: 355 VYSMSGNYNGRPRPAEVVVYGNEYGIARFRESLESLVAGQVIPSFI 400 >gi|257886456|ref|ZP_05666109.1| diaminopimelate decarboxylase [Enterococcus faecium 1,141,733] gi|257822510|gb|EEV49442.1| diaminopimelate decarboxylase [Enterococcus faecium 1,141,733] Length = 419 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 110/417 (26%), Positives = 182/417 (43%), Gaps = 16/417 (3%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAV 67 L V+ LA +TP Y Y + + L+F F DT V YA KA + Sbjct: 3 ELIIGGVTASTLAEKYKTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEM 62 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G GLD+VS GE+ AL A P + I F G KT +E+ A ++ + ++ Sbjct: 63 LRLVHEYGFGLDVVSGGEIYTALQADFPRDAIYFHGNNKTPEELSYAFENELLHVVADNL 122 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY--A 185 E++ L + + KK + R+N + A+TH+ I T + KFG+ A Sbjct: 123 MEVELLEELSQRYSKKVDVMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLI 182 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 +++ G HIGSQI + ++ L ++ +++GGG GI Y Sbjct: 183 KESSYLELEGFHAHIGSQIFDVTAWLAEIDKLTSYL----TDFDQPLSLNLGGGFGIRYT 238 Query: 246 SDHRPPSS-------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + +P +Y ++++EPGR +V + G + + IKK+ Sbjct: 239 QNDQPIPIEEALKKLIEYTEESLDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPH 298 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K + +D M D +RP LY A ++ + + I G +CE+GD + + Sbjct: 299 KKYYFVDGGMTDNIRPALYQAAYDCDLAEKM-SEEKTEKVTIAGKMCESGDVVIKETYLP 357 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GDLL + TGAYG S YN + VN Q ++ R F +L+ + Sbjct: 358 KAKSGDLLAVYSTGAYGYSMSSNYNRATRPAVVFVNNGQSRLVVRRQVFSDLLRGEV 414 >gi|226360613|ref|YP_002778391.1| diaminopimelate decarboxylase [Rhodococcus opacus B4] gi|226239098|dbj|BAH49446.1| diaminopimelate decarboxylase [Rhodococcus opacus B4] Length = 473 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 112/428 (26%), Positives = 189/428 (44%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + + + +LA TP + + AF G V YA KA + Sbjct: 46 DGVVSLAGIPVTELAEKYGTPLFVVDEDDFRSRCRDMARAF-GPAAKVHYASKAFLCGEI 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ S GEL AL A PA RI G K++ E++ A+ +G+ ++S Sbjct: 105 ARWVADEGLSLDVASGGELAVALHAGFPAGRIAMHGNNKSVAELNAAVSAGVGHIVLDSA 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAYA 185 +E+ L++ A G + RV + A+TH+ IST ++ KFG + + Sbjct: 165 TEIDRLDKVAAEAGVVQDVLIRVTVGVEAHTHEFISTAHEDQKFGFSLAGGKAIDAVRRV 224 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGL 240 +++ G+ HIGSQI ++ F A + + + I ID+GGG+ Sbjct: 225 FAADNLRLVGLHSHIGSQIFDVDGFEVAAHRVIGLLRDVVAEFGVDKTAQISIIDLGGGM 284 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISI 293 GI+Y PP A+ + + + + +EPGR + + + +V +I Sbjct: 285 GISYVPTDDPPPVDQLAAKLGDIVRHESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTI 344 Query: 294 KKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 K + +V +D M+D +R LY A +E +V+ D + + +VG CE+G Sbjct: 345 KDVTVGSNLTRRYVSVDGGMSDNIRTALYQAEYE-AKLVSRVSDAAPVVSRVVGKHCESG 403 Query: 349 DFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + + GDLL + TGAY S YN + V Q +I R T Sbjct: 404 DIVIRDTWMPEDIDAGDLLAVAATGAYCYSMSSRYNLLARPAVVAVRDGQSRVILRRETV 463 Query: 408 QELIELDS 415 ++L+ L+ Sbjct: 464 EDLLSLEV 471 >gi|257069086|ref|YP_003155341.1| diaminopimelate decarboxylase [Brachybacterium faecium DSM 4810] gi|256559904|gb|ACU85751.1| diaminopimelate decarboxylase [Brachybacterium faecium DSM 4810] Length = 470 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 120/429 (27%), Positives = 191/429 (44%), Gaps = 22/429 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF-----DGMDTMVCYALKAN 62 EG++ V + ++A V TP + F +AF V YA KA Sbjct: 42 EGAVEVGGVDVRRIAEEVGTPAFVLDEDDFRHRARAFRDAFAEAFRPHRGADVYYAGKAF 101 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 AV + + G GLD+ + GEL AL A PA RI G K+ EI AL++G+ Sbjct: 102 LCGAVARWVEEDGLGLDVCTGGELAVALRAGFPASRIALHGNNKSASEIRRALEAGVGRI 161 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ++S E+ +++ A LG +A + RV + A+TH+ I+T ++ KFG+ + + Sbjct: 162 VIDSLDEIDQVDEIAARLGLRAGVMLRVTTGVEAHTHEFIATAHEDQKFGLSLTGGSAFE 221 Query: 183 AYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGG 239 A L P + + G+ HIGSQI F A + + L ++R GH I +D+GGG Sbjct: 222 AVHRVLDAPQLDLLGLHSHIGSQIFDTGGFEVAARRVLQLVARVRDELGHTIDQLDLGGG 281 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVIS 292 G+ Y++ H P + A+ I + EPGR + + V + Sbjct: 282 FGVMYNTQHTPSTPEALAAGIAGIVEKQCHELELDVPHLAFEPGRAIAGPSTQTLYSVGT 341 Query: 293 IKK-----SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 +K + +V +D M+D +R LYDA + + +VG CE+ Sbjct: 342 VKDVRLGGPHHRVYVSVDGGMSDNVRTALYDADYSCLLTGR-VSEAAPEVVRVVGKHCES 400 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 GD + + + R GDL+ + TGAY + YN P I V + + R T Sbjct: 401 GDIVVKDEYLPADVRRGDLISVPVTGAYCYSLASNYNHVPRPPVIAVRDGEIRTLIRRET 460 Query: 407 FQELIELDS 415 ++L+ LD Sbjct: 461 EEDLLGLDV 469 >gi|229490040|ref|ZP_04383893.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121] gi|229323141|gb|EEN88909.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121] Length = 473 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 115/428 (26%), Positives = 190/428 (44%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V + +LA TP + + AF G D V YA KA + Sbjct: 46 DGEVTLAGVKVGELAEKYGTPLFVIDEDDFRSRCRDMARAF-GPDAKVHYASKAFLCGEI 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ S GEL AL A PAERI G K++ E+ + +G+ ++S Sbjct: 105 ARWVADEGLSLDVCSGGELAIALHADFPAERIAMHGNNKSVAELAAGVAAGVGHVVLDSS 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYAYA 185 E+ L++ A G + R+ + A+TH+ IST ++ KFG + Sbjct: 165 IEIDRLDRVAGEAGVVQDVLIRLTVGVEAHTHEFISTAHEDQKFGFSLAGGAAIDAVRRV 224 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGL 240 +++ G+ HIGSQI ++ F A + +T+ I ID+GGG+ Sbjct: 225 FAADNLRLVGLHSHIGSQIFDVDGFEVAAHRVIGLLRDVVTEFGVEKTKQISIIDLGGGM 284 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISI 293 GI+Y PP + A+ + N + + +EPGR + + + +V +I Sbjct: 285 GISYIPSDDPPPVDELAAKLGHIVRNESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTI 344 Query: 294 KKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 K + ++ +D M+D +R +LY A +E +V+ + + A IVG CE+G Sbjct: 345 KDVTVGSSLTRRYISVDGGMSDNIRTSLYGAEYE-AKLVSRTSEADPVVARIVGKHCESG 403 Query: 349 DFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + + PGDLL + TGAY S YN + V +I R T Sbjct: 404 DVVIRDTWMPEDVGPGDLLAVAATGAYCYSMSSRYNLLTRPAVVAVRDGVSRVILRRETV 463 Query: 408 QELIELDS 415 ++L+ L+ Sbjct: 464 EDLLSLEV 471 >gi|296268863|ref|YP_003651495.1| diaminopimelate decarboxylase [Thermobispora bispora DSM 43833] gi|296091650|gb|ADG87602.1| diaminopimelate decarboxylase [Thermobispora bispora DSM 43833] Length = 465 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 108/418 (25%), Positives = 179/418 (42%), Gaps = 13/418 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G+L V + LA TP Y + +AF D V YA KA + V Sbjct: 49 GGALTVGGVDVRDLAREFGTPLYIVDEEDFRSRCRDYRSAFP--DGDVHYAGKAFLCREV 106 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G GLD+ + GEL AL+ P ERI G K++ E++ A+ +G+ ++S Sbjct: 107 ARWIDQEGLGLDVCTGGELAVALSVGFPPERITMHGNNKSVAELERAVTAGVGRIVIDSF 166 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ L Q A G++ + RV + A+TH+ I+T + KFG+ + + A Sbjct: 167 EEIDRLGQIAARYGRRPKVLIRVTVGVEAHTHEFIATAHDDQKFGLSLSSGAAAEAVRRV 226 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L P +++ G+ HIGSQI + F A + L L +R + +D+GGG GI Y Sbjct: 227 LARPQLELVGLHSHIGSQITDVGGFEVAARRLAGLLVGIRDEHGVVLPELDLGGGYGIPY 286 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 P A + + + ++I+EPGR + GI + +V ++K Sbjct: 287 VEGDEAPDIKVIADGLREITTTVCRSAGLPVPRLIVEPGRSIAGIAGITLYEVGTVKDVE 346 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T + + + D + + +VG CE+GD + + + Sbjct: 347 GLRTYVSVDGGMSDNIRTALYGANYTAVVASRESDAAPMLSRLVGKHCESGDMVIRDLWL 406 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 PGDL+ + TGAY S YN + V+ +I R T ++L+ Sbjct: 407 PSDVVPGDLIAVAGTGAYCRSLSSNYNYLPRPAVVAVSKGAARVIVRRETEEDLLRGQ 464 >gi|254556609|ref|YP_003063026.1| diaminopimelate decarboxylase [Lactobacillus plantarum JDM1] gi|254045536|gb|ACT62329.1| diaminopimelate decarboxylase [Lactobacillus plantarum JDM1] Length = 441 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 126/427 (29%), Positives = 190/427 (44%), Gaps = 17/427 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQA 66 L V LA QTP Y Y T AI F F+ +D + YA KA + A Sbjct: 14 HHLMVGGVDTLTLAKKYQTPLYVYDTGAIRAEIAAFKQVFEENHVDYQISYASKAFATVA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + +A D+VS GEL A A P + F G K++ E+ +AL +G+ V++ Sbjct: 74 MYQLIAQEHIHCDVVSGGELYTAQQADFPMAAVSFHGNNKSLAELTMALDAGVGTIVVDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY-- 184 EL+ L + I R+ P I+A+TH ISTG+ + KFG + + A Sbjct: 134 FGELRQLTTLTTQRQQPTTIMLRIAPGISAHTHDYISTGQADSKFGFDLDSGQADQAIKA 193 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIA 243 A P +K+ G+ HIGSQI ++ F L + R Q ++VGGG G+ Sbjct: 194 AQAAPYLKLVGIHCHIGSQIFEVNGFEMIVDKLVSEFARWQRELDFYPQIMNVGGGFGVK 253 Query: 244 YHSDHRPPSSSDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y ++ P +D+ I + +I +EPGR LVA G+ + + K Sbjct: 254 YTAEDHPLQPTDFVDAIIKETRAQTAAQQVPMLEIWIEPGRSLVATAGMTLYTIGDEKDI 313 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M D +RP LY A +E NPA + A I G CE+GD + N+ Sbjct: 314 PGIRKYLSVDGGMGDNIRPALYQAKYEAVLAKNPALPAEQV-ASIAGKYCESGDMLIWNQ 372 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD- 414 ++ PGD+L + TGAYG + YN + ++ R ++ +L LD Sbjct: 373 QLPATAPGDVLVVLDTGAYGYSMASNYNRNPRPAVVFCEQGHSQLVVQRESYADLTRLDL 432 Query: 415 --SIPAW 419 S+P Sbjct: 433 PLSVPEK 439 >gi|162148745|ref|YP_001603206.1| diaminopimelate decarboxylase [Gluconacetobacter diazotrophicus PAl 5] gi|161787322|emb|CAP56916.1| putative diaminopimelate decarboxylase [Gluconacetobacter diazotrophicus PAl 5] Length = 491 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 164/427 (38%), Positives = 238/427 (55%), Gaps = 6/427 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALK 60 + +G L E+V L +A V TP + + Y + A + +A+K Sbjct: 65 SMHALDG-LVFEDVPLNAIADAVGTPTWVMGAGTLRARYRRLAGALRDAGLAPSIHFAVK 123 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN + AV++ LA G+G D+VS GELRRA AA +PA IVFSGVGK+ DE+ LA+ GI Sbjct: 124 ANDHLAVLRVLAAEGAGADVVSGGELRRARAAGIPAAGIVFSGVGKSRDELHLAVTEGIA 183 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 VES EL ++ AV+ G+ A I RVNPD++A TH+KI+TG +KFGI + Sbjct: 184 HIAVESAEELDVVSDVAVAAGRTARITLRVNPDVDAGTHEKITTGLSTNKFGIAYARAAD 243 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LYA A+ LPG+ G +HIGSQI + + AF + DL + +R+ G ++ +D GGGL Sbjct: 244 LYARAAALPGLHPLGFSVHIGSQIVAMGPYRAAFARVADLVRAVRARGLSVGLVDCGGGL 303 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-- 298 GI Y + + A I G+L ++ +EPGR+L G+L+++VI K D Sbjct: 304 GIRYRDEVEG-APMALAGAIRAELGDLDVRLAIEPGRWLAGPAGVLLSRVILRKAGQDGL 362 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 F+ILD AMND RP+LYD++H I + + ++VGP+CE+ D A R + Sbjct: 363 PPFLILDAAMNDLARPSLYDSWHGILPLSARDAVQPVESVNVVGPVCESADSFATGRMLP 422 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 G + + TGAYG V S TYN R L +++V+G ++ +IR R + L D +P Sbjct: 423 RMGDGAAVALLDTGAYGMVMSSTYNGRPLAAQVLVDGGRWSVIRARQPVESLWAADRVPD 482 Query: 419 WLQKTPK 425 WL P Sbjct: 483 WLAPQPV 489 >gi|226307410|ref|YP_002767370.1| diaminopimelate decarboxylase [Rhodococcus erythropolis PR4] gi|226186527|dbj|BAH34631.1| diaminopimelate decarboxylase [Rhodococcus erythropolis PR4] Length = 473 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 115/428 (26%), Positives = 190/428 (44%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V + +LA TP + + AF G D V YA KA + Sbjct: 46 DGEVTLAGVKVGELAEKYGTPLFVIDEDDFRSRCRDMARAF-GPDAKVHYASKAFLCGEI 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ S GEL AL A PAERI G K++ E+ + +G+ ++S Sbjct: 105 ARWVADEGLSLDVCSGGELAIALHADFPAERIAMHGNNKSVAELAAGVAAGVGHVVLDSA 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYAYA 185 E+ L++ A G + R+ + A+TH+ IST ++ KFG + Sbjct: 165 IEIDRLDRVAGEAGVVQDVLIRLTVGVEAHTHEFISTAHEDQKFGFSLAGGAAIDAVRRV 224 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGL 240 +++ G+ HIGSQI ++ F A + +T+ I ID+GGG+ Sbjct: 225 FAADNLRLVGLHSHIGSQIFDVDGFEVAAHRVIGLLRDVVTEFGVEKTKQISIIDLGGGM 284 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISI 293 GI+Y PP + A+ + N + + +EPGR + + + +V +I Sbjct: 285 GISYIPSDDPPPVDELAAKLGHIVRNESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTI 344 Query: 294 KKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 K + ++ +D M+D +R +LY A +E +V+ + + A IVG CE+G Sbjct: 345 KDVTVGSSLTRRYISVDGGMSDNIRTSLYGAEYE-AKLVSRTSEADPVVARIVGKHCESG 403 Query: 349 DFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + + PGDLL + TGAY S YN + V +I R T Sbjct: 404 DVVIRDTWMPEDVGPGDLLAVAATGAYCYSMSSRYNLLTRPAVVAVRDGVSRVILRRETV 463 Query: 408 QELIELDS 415 ++L+ L+ Sbjct: 464 EDLLSLEV 471 >gi|113476062|ref|YP_722123.1| diaminopimelate decarboxylase [Trichodesmium erythraeum IMS101] gi|110167110|gb|ABG51650.1| diaminopimelate decarboxylase [Trichodesmium erythraeum IMS101] Length = 475 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 112/431 (25%), Positives = 185/431 (42%), Gaps = 15/431 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 L + L +P Y + + + +++V YA KA S+ Sbjct: 43 DHLEIGGWDIPALVEKFGSPLYIIDEYTLRTACRQYRDGLQKYYPGESLVLYASKAWSSL 102 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 AV A G G+D+VS GEL A+ A V ++I F G K++ E+ A+++ Sbjct: 103 AVCALCASEGLGIDVVSGGELYTAIEAGVNPDKIYFHGNNKSLAELTFAIETDCIIVVDN 162 Query: 126 S---ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 E+ Q+ + I R P I +TH+ I TG + KFG Q++ ++ Sbjct: 163 WLELETLAGLKKQQKDQVQNPTKIMVRFTPGIECHTHEYIRTGHLDSKFGFDPGQLNDVF 222 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ S + + GV HIGSQI +++ ++ D S+ I+ I++GGGLGI Sbjct: 223 AFISKEELLLLIGVHAHIGSQIFEVQPHQDLVTVMVDTMTTAMSHNLPIKEINIGGGLGI 282 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKK 295 Y PPS + + ++ K++ EPGR ++ I + S K+ Sbjct: 283 RYTETDDPPSIETWVHKVSTAMVDVCKARQLPLPKLLCEPGRSIIGPACITAYTIGSQKE 342 Query: 296 SADKTFVIL-DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + I D M+D RP Y + + N I G CE+GD + N Sbjct: 343 IPEIRTYISVDGGMSDNPRPITYQSVYRAIV-ANRLSKPSTEVVTIAGKHCESGDILIKN 401 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + + +PGD + TGAY + YN ++V + +II R T+Q+L+ D Sbjct: 402 ATLPVTQPGDCFVVMATGAYNYSMASNYNRLPRPAAVLVAEKEVNIILQRETYQDLLSKD 461 Query: 415 SIPAWLQKTPK 425 ++P + PK Sbjct: 462 TLPERIATLPK 472 >gi|306819981|ref|ZP_07453632.1| diaminopimelate decarboxylase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552017|gb|EFM39957.1| diaminopimelate decarboxylase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 427 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 109/420 (25%), Positives = 192/420 (45%), Gaps = 9/420 (2%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKAN 62 + SL+ ++V +E +A TP Y YS +I + F + + YA KA Sbjct: 4 EIKNSSLYIDDVKVEDVAKKFGTPLYVYSYDSIVAEMNSLKKDFKQKYENVRIAYASKAF 63 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + A+ + L LD+VS GEL A+ A PAE I F+G K+ +E+++A+ G+ Sbjct: 64 NCIAMCQILKKHSLCLDVVSGGELYTAIKANFPAEHIEFNGNNKSTEELEMAIDYGVGRI 123 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ++ E+ + + + KK + FR+NP ++++T++KISTGK + KFGIP + Sbjct: 124 IIDGLFEIDIIEEICKAKDKKVNVLFRINPGVDSHTNEKISTGKIDSKFGIPTDEDVFFP 183 Query: 183 --AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGG 239 A + G+ H+GSQ+ S A ++ +L +++R ++ I++GGG Sbjct: 184 LVQRALKSEYINFLGLHFHVGSQLFDNSSHILATDVVLELAEKIREKFDFELKEINLGGG 243 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNL----QCKIILEPGRFLVADVGILVTKVISIKK 295 G+ Y + + P S L+ + + +++EPGR L+ + G + KV IK Sbjct: 244 FGVVYTDEKKMPYSYFLDPLMEKIEQYYKGKKRPAVVIEPGRSLIGESGFQLYKVGQIKD 303 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 D + IVN A I G CE+GD + + Sbjct: 304 IKDVRKYVSVDGGMTDNIRPTLYDAKYSAMIVNKADKVKEESVTICGKCCESGDILIKDI 363 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + D++ I TGAYG + YN + +M+ + I R ++ ++I+ + Sbjct: 364 SLPKVEKDDIIAIFTTGAYGYAMANNYNKTRIPAVVMIKDNDVFEIIRRQSYDDIIKNEV 423 >gi|189095960|pdb|2QGH|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase From Helicobacter Pylori Complexed With L-Lysine Length = 396 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 158/396 (39%), Positives = 231/396 (58%), Gaps = 8/396 (2%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 3 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 62 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE++RAL A + RIVFSGVGK+ EI+ AL+ I NVES ELKT+ A Sbjct: 63 DCVSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQ 122 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 123 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 182 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 183 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 241 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK +K FVI+D MNDF+RP+LY Sbjct: 242 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKK--NKRFVIVDAGMNDFLRPSLY- 298 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + + D+VGP+CE+ D + + PGD + IEK GAYG+ Sbjct: 299 ---HAKHAIRVITPSEISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSM 355 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR R ++L L+ Sbjct: 356 ASQYNSRPKLLELALED-KIRVIRKREALEDLWRLE 390 >gi|257468497|ref|ZP_05632591.1| diaminopimelate decarboxylase [Fusobacterium ulcerans ATCC 49185] gi|317062756|ref|ZP_07927241.1| diaminopimelate decarboxylase [Fusobacterium ulcerans ATCC 49185] gi|313688432|gb|EFS25267.1| diaminopimelate decarboxylase [Fusobacterium ulcerans ATCC 49185] Length = 434 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 114/426 (26%), Positives = 188/426 (44%), Gaps = 14/426 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 K G L V + +LA TP Y IE+N + N F DT + YA KA Sbjct: 7 MKAENGILAIGGVKVTELAAKYGTPLYIMDQALIEENITKYKNNFKSTKFDTSIVYASKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 ++A+ + + +D VS GEL A+ +P +++ G KT +E+++ L I Sbjct: 67 FLSKAICQLVGKYDIDIDAVSGGELYAIKASGLPMKKVHMHGNNKTNEELEMCLDYEIGS 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 +++E E+ L++ K+ + R+N I+A+TH+ I T K KFG I Sbjct: 127 IIIDNEEEIGRLSKICKEKDKQVKVMMRINIGIDAHTHEYIKTSKHSSKFGESIFDERIT 186 Query: 182 Y--AYASTLPGVKISGVDMHIGSQIDQIESFHKAFK-LLRDLTQQLRSNGHNIQHIDVGG 238 ++ G HIGSQI ++FH+ + ++++ + + G I I++GG Sbjct: 187 EIVEKIVKDENMEFLGFHCHIGSQIFDTKAFHEGIESMVKETKKISEALGIYIPEINLGG 246 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVI 291 G G+ Y + + ++ K+ +EPGR +VA+ G + V Sbjct: 247 GFGVYYTEKDTAIDIEQFMRSMIEHLEKSIEAEKLEIKKVTIEPGRSIVANAGSTLYTVG 306 Query: 292 SIKK-SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 K ++ +D M D +RP LY A +E I + G CE+GD Sbjct: 307 GTKTTYGGVKYIFIDGGMTDNIRPALYQAEYESIVANKVDAPAEEI-VTVAGKCCESGDL 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 I + K+A GDL+ + TGAYG S YN + V + + R +F++L Sbjct: 366 IIKDGKLAKAETGDLVLVATTGAYGHSMSNNYNKAPKPAVVFVKDGKSTLSIKRESFEDL 425 Query: 411 IELDSI 416 I D + Sbjct: 426 IRNDML 431 >gi|167755248|ref|ZP_02427375.1| hypothetical protein CLORAM_00753 [Clostridium ramosum DSM 1402] gi|237734996|ref|ZP_04565477.1| diaminopimelate decarboxylase [Mollicutes bacterium D7] gi|167705298|gb|EDS19877.1| hypothetical protein CLORAM_00753 [Clostridium ramosum DSM 1402] gi|229381772|gb|EEO31863.1| diaminopimelate decarboxylase [Coprobacillus sp. D7] Length = 435 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 112/424 (26%), Positives = 179/424 (42%), Gaps = 14/424 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKAN 62 + +L+ ++V +LA TP Y S I + +T+ +A K+ Sbjct: 9 QIKNNNLYIDDVKATELAKKYGTPLYVMSEGHIRHQFNKLKTKMIEKYENTLPLFASKSF 68 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S A+ K G G+D VS GE+ AL + ++I F G K EI+ AL++G+ F Sbjct: 69 SCIAIYKIAKEYGVGIDCVSAGEISVALKSGFDPKKIYFHGNNKLPSEIEYALENGVENF 128 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS-- 180 +++ E+ + + A LG K R+ P + A H I G K+ KFG H Sbjct: 129 VIDNFYEIDLVQEIASRLGVKINGIVRITPGVYAGGHDYIRVGAKDTKFGFSSHDNTYLK 188 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL-RDLTQQLRSNGHNIQHIDVGGG 239 P + G+ H+GSQI+ I+++ A + G I ++ GGG Sbjct: 189 AIKKVIDAPNINFDGIHCHVGSQIEDIQAYVLAMNKFVEIAYEIYDIFGIVINKLNAGGG 248 Query: 240 LGIAYHSDHRPPSS-------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 GIAY + P + + G + +++EPGR+ V + GI + V S Sbjct: 249 FGIAYTAADNPLEFETVVDTIMEIITKGFDARGLKRPMVLVEPGRYCVGNAGITLYTVGS 308 Query: 293 IKKSADKTFVIL-DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 K D I D M D +R +LY A ++ H+ + G CE+GD + Sbjct: 309 SKYIKDIRDYITVDGGMTDNIRSSLYAAKYDAIIANKAEMPTDHLI-TVAGKNCESGDIL 367 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + P PGD+L + TGAY S YN + + + R TF +L+ Sbjct: 368 IKDIMLQDPEPGDILAMFSTGAYHYSMSSNYNQLPKPAVVFTYEGKDREVIRRQTFDDLV 427 Query: 412 ELDS 415 D Sbjct: 428 YYDI 431 >gi|227512608|ref|ZP_03942657.1| diaminopimelate decarboxylase [Lactobacillus buchneri ATCC 11577] gi|227084073|gb|EEI19385.1| diaminopimelate decarboxylase [Lactobacillus buchneri ATCC 11577] Length = 435 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 98/419 (23%), Positives = 168/419 (40%), Gaps = 12/419 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQA 66 G L L +TP Y ++I F F+ +D V YA KA + A Sbjct: 14 GHLEIGGADALDLVKKYKTPLVVYDVSSIRNQIHHFQKVFEDNHVDYAVSYASKAFACIA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + + +D+VS GEL A+ A P + + F G K+++E+++A+ I +++ Sbjct: 74 MFQLVNQENAHIDVVSGGELYTAIKAGFPMDHVSFHGNNKSVEELEMAVDHQIGVIILDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ L Q + RV P ++A+TH+ TG+ + KFG + + A Sbjct: 134 FHEIALLKQILKDKDAHINVMLRVTPGVSAHTHEYDQTGQTDSKFGFDLQSGQARKALDE 193 Query: 187 TLPGVKISGVDMHIGSQIDQIE---SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L +++ + +H E A KL+ L Q + G+ + ++VGGG GI Sbjct: 194 VLADQRMTMLGIHAHIGSQIFEVKGFELAATKLIDTLGQWHKEIGYVAKVVNVGGGFGIR 253 Query: 244 YHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P + + I + + +EPGR + G + V S K Sbjct: 254 YTEEDDPIAPEMFVDAIVKAIKKRARELALPMPAVWIEPGRSIAGPAGYNLYTVGSRKDV 313 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + + N + G CE+GD + + Sbjct: 314 PGIRSYVTVDGGMGDNIRPALYQAEYDAVLANDPKAPAKETVRVAGKYCESGDILIQKQA 373 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + +PGD+L + TGAYG + YN I Q +++ R TF++LI LD Sbjct: 374 LPQTKPGDVLAMLATGAYGYAMASNYNRNPRPAVIFAENGQDNLVIRRETFEDLIRLDQ 432 >gi|256390400|ref|YP_003111964.1| diaminopimelate decarboxylase [Catenulispora acidiphila DSM 44928] gi|256356626|gb|ACU70123.1| diaminopimelate decarboxylase [Catenulispora acidiphila DSM 44928] Length = 465 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 118/418 (28%), Positives = 185/418 (44%), Gaps = 13/418 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G+L V + +LA TP Y + + AF G D V YA K+ + A+ Sbjct: 47 GALTFAGVDVRELASEFGTPAYLIDEDDWRRRAREWVEAF-GADADVFYAGKSFLSVAIA 105 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 K A G LD+ S GEL AL A PAER+ F G K++ E++ A+ +G+ V+S Sbjct: 106 KWAAEEGLHLDVCSGGELAVALRAGFPAERLGFHGNNKSVAELERAVDAGVGRIIVDSHD 165 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY---AYA 185 E++ L A G + + RV P + A+TH+ I+T ++ KFG + + Sbjct: 166 EIERLAAIAADRGVRQRVMLRVTPGVEAHTHEFIATAHEDQKFGFSLAGGAAAEAVARLL 225 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKA-FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 ++++G+ HIGSQI F A +L L R +G + +D+GGGLGIAY Sbjct: 226 KHADHLELTGLHSHIGSQIFDTAGFEVAAHRLTEALAAIKRDHGIELPELDLGGGLGIAY 285 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 P ++ A + + ++ +EPGR + GI + +V ++K Sbjct: 286 TEGDDPAPVAETARRLKEIVARECDAAGLTRPRLSVEPGRAIAGPPGITLYEVGTVKPLP 345 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T +V+ + + + + +VG CE+GD + + + Sbjct: 346 GLRTYVSVDGGMSDNIRTALYDAEYTAALVSRSSTAVPVLSRVVGKHCESGDIVVRDAWL 405 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 PGDLL I TGAY + YN L P I V I R T +L+ LD Sbjct: 406 PGDTAPGDLLAIAATGAYCRSMASNYNHLLKPPVIAVKDGAARTIVRRETEDDLLGLD 463 >gi|224541272|ref|ZP_03681811.1| hypothetical protein CATMIT_00432 [Catenibacterium mitsuokai DSM 15897] gi|224525821|gb|EEF94926.1| hypothetical protein CATMIT_00432 [Catenibacterium mitsuokai DSM 15897] Length = 433 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 114/424 (26%), Positives = 172/424 (40%), Gaps = 15/424 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKAN 62 L+ + + LA TP Y S I F + +A K+ Sbjct: 9 DIKGNDLYIDGIKASDLAKQYGTPLYVMSEGHIRHQMNELKTKFMDKYEKALPLFASKSF 68 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S A+ K G G+D VS GE+ AL A ++I F G K EI+ AL + F Sbjct: 69 SCLAIYKLANEYGIGIDCVSAGEISIALRAGFDPDKIYFHGNNKLPSEIEYALSHDVTHF 128 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V++ E++ + A LGKK R+ P I A H I TG K+ KFG H L Sbjct: 129 VVDNFYEIENCEKIAGKLGKKVKATLRIVPGIKAGGHNYIMTGHKDTKFGFSSHYGIYLK 188 Query: 183 AYASTLPGVKIS--GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 A L I G+ HIGSQ+ + ++ A ++ + + GG Sbjct: 189 AIQQILESDNIEYEGIHCHIGSQVFDLFAYVNAMLQFMKFVNEIYNTFGVVTSKINAGGG 248 Query: 241 GIAYHSDHRPP--------SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 ++ P + G + +++EPGR++V + GI + V Sbjct: 249 YGIAYTKQDEPLDFESITSEIMKVIYNEYDSHGWERPAVMIEPGRYVVGNAGITLYTVGC 308 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK+ D +D M+D +R LYDA ++ N AG+ +VG ICE+ D I Sbjct: 309 IKEIPDVRTYVSIDGGMSDNIRTPLYDAKYDGIV-ANKAGETKTKTVTVVGKICESADMI 367 Query: 352 ALNRKI-ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + A PGD+ + TGAY S YN + + ++ R TF +L Sbjct: 368 TKDLPVTANIMPGDIFAVFSTGAYNYSMSSNYNQLPKPAVVFTYEGESRVVVRRQTFDDL 427 Query: 411 IELD 414 I D Sbjct: 428 ILFD 431 >gi|261856756|ref|YP_003264039.1| diaminopimelate decarboxylase [Halothiobacillus neapolitanus c2] gi|261837225|gb|ACX96992.1| diaminopimelate decarboxylase [Halothiobacillus neapolitanus c2] Length = 430 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 178/431 (41%), Positives = 253/431 (58%), Gaps = 13/431 (3%) Query: 1 MSAFKYF------EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM 54 M+A Y + +L E +L+++A TP Y YS +AIE+ Y + AF Sbjct: 1 MTALPYDHLTRSADQTLCLEGCALDQIAAEFGTPTYVYSRSAIERAYTELTTAFGDRPHR 60 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 +CYA+KANSN A++ LA LG+G DIVS GEL R L A AE+IVFSGVGKT DEI+ A Sbjct: 61 ICYAVKANSNLAILALLARLGAGFDIVSGGELARVLKAGGAAEKIVFSGVGKTRDEIEQA 120 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 L++G+ C NVESE+EL +++ A LG API+ RVNPD++A TH ISTG K++KFG+P Sbjct: 121 LRAGVGCLNVESEAELARISEVAAGLGVVAPISLRVNPDVDAKTHPYISTGLKDNKFGVP 180 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 I Q +LY + + +K G+D HIGSQI + F A + + L L G + H+ Sbjct: 181 IEQAPALYRHIARDANLKAVGIDCHIGSQITDVSPFADAARRVLALLDTLVLEGIELAHL 240 Query: 235 DVGGGLGIAYHSDHRPPSSSD---YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 D+GGGLGI Y + P ++ S+I ++ ++LEPG+FLV G+L+++V Sbjct: 241 DLGGGLGIRYTDEQPPSAADWVDAVTSVIDRHPIARHLPLMLEPGKFLVGPSGVLLSRVE 300 Query: 292 SIKKSA--DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 +K K+F I+D AMND +RP LY + V P +IVGP+CETGD Sbjct: 301 YLKPHPSDGKSFAIVDAAMNDLVRPALYGSVM-AIEAVKPDPVMAAKDWEIVGPVCETGD 359 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 F+ R +AL + GDL+ + GAYG + YN+R E++V+ +I R + + Sbjct: 360 FLGHGRSLALAQ-GDLIAVLGAGAYGFSMASNYNTRGRAAEVLVDERGATLIGARESVES 418 Query: 410 LIELDSIPAWL 420 L L+SIP L Sbjct: 419 LWALESIPPSL 429 >gi|297157206|gb|ADI06918.1| diaminopimelate decarboxylase [Streptomyces bingchenggensis BCW-1] Length = 463 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 118/408 (28%), Positives = 180/408 (44%), Gaps = 12/408 (2%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 + LA TP Y + AF G D V YA KA +AV++ L G L Sbjct: 56 KTLAEEFGTPGYFLDENDFRARCRAWREAF-GADADVFYAGKAFLCRAVVRWLNEEGLNL 114 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D+ S GEL AL A +PAERI G K+ EI A+++G+ ++S E+ + A Sbjct: 115 DVCSAGELATALGAGMPAERIALHGNNKSEAEIRRAVEAGVGRIVLDSFQEIVRVAHIAE 174 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYASTLPGVKISGV 196 LGK+ + RV + A+TH+ I+T ++ KFGIP+ A L G+++ GV Sbjct: 175 RLGKRQRVQIRVTVGVEAHTHEFIATAHEDQKFGIPLAGGLAAEAVRRALKLDGLELIGV 234 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSSD 255 HIGSQI F A + L +++R + ID+GGGLGIAY S+ P Sbjct: 235 HSHIGSQIFDTSGFEVAAHRVVGLLKEIRDEHGIELPEIDLGGGLGIAYTSEDDPSEPHQ 294 Query: 256 YASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 A + ++ +EPGR + + +V ++K+ + Sbjct: 295 IAKALRDIVHRECEAAGLEVPRLSVEPGRAIAGPTTFTLYEVGTVKELPALRTYVSVDGG 354 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLY 367 T +V+ + + +VG CE+GD + + + PGDL+ Sbjct: 355 MSDNIRTALYDAEYSVALVSRISTAEPMLSRVVGKHCESGDIVVRDAFLPADLAPGDLIA 414 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + TGAY + YN L P + V Q I R T ++L+ LD Sbjct: 415 VPATGAYCRSMASNYNHALRPPVVAVKDGQAREIVRRETEEDLLRLDV 462 >gi|116073043|ref|ZP_01470305.1| Diaminopimelate decarboxylase [Synechococcus sp. RS9916] gi|116068348|gb|EAU74100.1| Diaminopimelate decarboxylase [Synechococcus sp. RS9916] Length = 456 Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats. Identities = 110/423 (26%), Positives = 180/423 (42%), Gaps = 11/423 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 +G + + L LA TP Y I + A + ++ YA KANS+ Sbjct: 28 QGRMTVGDCRLSDLAERYGTPLYVLDEAGIRAACRAYRTALECHYPGPSLAVYASKANSS 87 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+ A G GLD VS GEL AL +PAERIV G K+ +E+ L Sbjct: 88 LALSAIAASEGLGLDAVSAGELLTALKGGMPAERIVLHGNNKSDEEL-LLAYRNDVMIVA 146 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +++ +L L + + A + R P I +TH+ I TG + KFG Q+ + + Sbjct: 147 DNQHDLDRLAVLVPAGERPARLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEPVLRH 206 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 +T K++G+ HIGSQI ++ ++ D + R GH + ++VGGGLGI Y Sbjct: 207 LATCGWAKVTGLHAHIGSQIFELNPHRDLAAVMADALKLARGLGHPVTDLNVGGGLGIRY 266 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSA 297 PPS + ++ + + + EPGR LVA G+ + + S K+ Sbjct: 267 VESDDPPSIDAWVQVVAEAVVAACRERSLDLPRLLCEPGRSLVASSGVTLYSIGSRKEVP 326 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + + + + + G CE+GD + + + Sbjct: 327 GVRTYLSVDGGMSDNPRPITYQSLYTALLADRPQAEATESITLAGKHCESGDVLLNDLAL 386 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 GD+L + TGAY A S YN ++V+ +I+ R + ++L+ D++P Sbjct: 387 PPSVSGDVLVVLATGAYNASMSSNYNRIPRPAAVLVHDGMAEVIQRRESSEDLLRYDTLP 446 Query: 418 AWL 420 L Sbjct: 447 TRL 449 >gi|217077393|ref|YP_002335111.1| diaminopimelate decarboxylase [Thermosipho africanus TCF52B] gi|217037248|gb|ACJ75770.1| diaminopimelate decarboxylase [Thermosipho africanus TCF52B] Length = 384 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 140/396 (35%), Positives = 209/396 (52%), Gaps = 21/396 (5%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +K+A + TP Y Y +E+ N F+ ++ +A KAN+N A++K L + G G+ Sbjct: 6 QKVADEIGTPVYIYFEKILEERINKVKNVFEEINFFPTFAAKANNNPAILKILKNHGFGV 65 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 DI+ EGEL A + ++IV++G GKT ++ DL + + NV+S+ E + Sbjct: 66 DILGEGELLACKIASIEGDKIVWNGNGKTKEQKDLMKEYKVKYVNVDSKEEF----ENLW 121 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + RVNPDI+A TH ISTG K+ KFG+ + L KISGV + Sbjct: 122 KNEDDFELFLRVNPDIDAKTHPYISTGLKKHKFGVDFKTAEEI------LKSQKISGVHI 175 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQI ++ F +A + L Q+ N GG + D ++ +Y Sbjct: 176 HIGSQITDVKPFKEAIEKTLKLCQKYNIEKIN------IGGGWGIKYKDENELNTQEYKE 229 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I N + +I E GRF++A G L+T+V IKK+ K FV+ + MN +RP LY+ Sbjct: 230 EIIPLLKNFK-LVINELGRFIIAPAGFLLTRVTLIKKTEKKFFVVTESGMNHLLRPALYN 288 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYHEI + N + I AD+VGP+CE+GDF+A RKI P G+LL I+ GAYG Sbjct: 289 AYHEIEVLNN---SKDEILADVVGPLCESGDFLAKERKIKKPEIGELLVIKNAGAYGFSM 345 Query: 379 SGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 + YN + E+++ + +IR R TF EL + Sbjct: 346 ANNYNGTVRPAEVLITKDGKIKLIRKRETFDELFKN 381 >gi|293571376|ref|ZP_06682406.1| diaminopimelate decarboxylase [Enterococcus faecium E980] gi|291608515|gb|EFF37807.1| diaminopimelate decarboxylase [Enterococcus faecium E980] Length = 419 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 105/413 (25%), Positives = 170/413 (41%), Gaps = 8/413 (1%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAV 67 L V+ LA QTP Y Y + + L+F F DT V YA KA + Sbjct: 3 ELIIGGVTASTLAEKYQTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEM 62 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G GLD+VS GE+ AL A P + I F G KT +E+ AL++ + ++ Sbjct: 63 LRLVHEYGFGLDVVSGGEIYTALQADFPRDAIYFHGNNKTPEELIYALENELLHVVADNL 122 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY--A 185 E++ L + + KK + R+N + A+TH+ I T + KFG+ A Sbjct: 123 MEVELLEELSQRYSKKVDVMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLI 182 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 +++ G HIGSQI + ++ L G Sbjct: 183 KESSYLELEGFHAHIGSQIFDVTAWLAEIDKLTSYLTDFEQPLSLNLGGGFGIRYTQNDQ 242 Query: 246 SDHRPPSSSDYASLIHQYFGNL---QCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 + + ++++EPGR +V + G + + IKK+ K + Sbjct: 243 PIPIEEALKKLIEYTEEALDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYY 302 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +D M D +RP LY A ++ + + I G +CE+GD + + + Sbjct: 303 FVDGGMTDNIRPALYQAAYDCDLAEK-LSEEKTEKVTIAGKMCESGDVVIKETYLPKAKS 361 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GDLL + TGAYG S YN + VN Q ++ R F +L+ + Sbjct: 362 GDLLAVYSTGAYGYSMSSNYNRATRPAVVFVNNGQSRLVVRRQAFSDLLRGEV 414 >gi|260889906|ref|ZP_05901169.1| diaminopimelate decarboxylase [Leptotrichia hofstadii F0254] gi|260860512|gb|EEX75012.1| diaminopimelate decarboxylase [Leptotrichia hofstadii F0254] Length = 464 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 118/424 (27%), Positives = 189/424 (44%), Gaps = 15/424 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 +G+L V +LA +TP Y IE AF + DT + YA KA + Sbjct: 39 EKGNLSIGGVDASELAKEFKTPLYVMDQELIETTIDKMKEAFQSNRFDTQIAYAGKAFLS 98 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K + LD+VS GEL A A P +R+ G KT++E+++A++ GI + Sbjct: 99 MGMLKLVDAKELDLDVVSGGELYTAYKAGFPMDRVHLHGNNKTVEELEMAIEFGIKEIVI 158 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI--HSLY 182 ++E E+ + + GKK + R++P I A+TH I T KFGI + Q + Sbjct: 159 DNEDEIDKIEKICREKGKKQAVLVRIDPGIEAHTHHYIKTSGLTSKFGISLFQDNLFDII 218 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 + ++ G HIGSQI Q F A + +L+ + H GG Sbjct: 219 KRLNDSEWIEFKGFHTHIGSQIFQSAFFIFALDEIFKYLDKLKKELGIVVHTVNMGGGFG 278 Query: 243 AYHSDHRPPSSSD--------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 Y+ + P + Y + + ++ +EPGR +V + G + +V IK Sbjct: 279 VYYKEGDDPKPIEEVLSEIITYTEAMEIKYQIGFKELCIEPGRSIVGNAGTTLYEVGGIK 338 Query: 295 KS-ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 ++ KT+V +D M+D +R LY A +E +VN D + G +CE+GD I Sbjct: 339 ETVGGKTYVFIDGGMSDNIRTALYQAEYE-AGVVNKINDTDVREITLAGKLCESGDIIIE 397 Query: 354 NRKIALP-RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 K+ GD++ + TGAY S YN + + V + + R T +LI Sbjct: 398 KGKLPKATEIGDIVAVTTTGAYCYTMSSNYNRMMRPAVVFVKDGKAKVAVKRETLDDLIR 457 Query: 413 LDSI 416 D I Sbjct: 458 NDEI 461 >gi|254386377|ref|ZP_05001683.1| diaminopimelate decarboxylase [Streptomyces sp. Mg1] gi|194345228|gb|EDX26194.1| diaminopimelate decarboxylase [Streptomyces sp. Mg1] Length = 444 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 118/418 (28%), Positives = 194/418 (46%), Gaps = 15/418 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L V L ++A TP Y + T+ +AF D V YA KA ++A++ Sbjct: 29 GGLSVGGVPLAEIADRFDTPVYVLDEGEVRARCRTYRDAFP--DADVLYAAKAFLSRAMV 86 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G GLD+ S GEL A+ A P ER+V G K+ +I+ AL+ G+ ++ S Sbjct: 87 RWVDEEGLGLDVCSAGELELAVTAGFPPERMVLHGNAKSPHDIEAALRLGVGRIVIDGPS 146 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E+ L G + RV P I H+KI TG KFG+ + + +A A L Sbjct: 147 EIARLAAMV-GTGGSQKVMVRVVPGITVGGHEKIRTGTDGQKFGLSLTDGSAQHAIARVL 205 Query: 189 --PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYH 245 P ++++G+ HIGSQI ++ + A + + L ++R + +D+GGG GIAY Sbjct: 206 GQPQLELTGLHCHIGSQITDVKPYLAAVRRMVGLMARVRDAHGVVLPELDMGGGHGIAYR 265 Query: 246 SDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSAD 298 + A + ++ +EPGR + G+ + +V+++K++ D Sbjct: 266 PGEPALDLTALARRLRTALVESCAAAGLAVPRLTIEPGRAVAGPAGVALYRVLAVKRTGD 325 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + FV +D M+D RP LY + + + + A +VG CE GD +A + ++ Sbjct: 326 RVFVAVDGGMSDNPRPALYGVRYAPRLVGRRPAAQACV-ATVVGRHCEAGDILAADVELP 384 Query: 359 -LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 RPGDLL + GAY + YN P + V+ ++ R T + D Sbjct: 385 GDVRPGDLLAVPVAGAYQLSMASGYNLVGRPPVVAVDNGVARLLMRRETLADFRSRDI 442 >gi|257892663|ref|ZP_05672316.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,408] gi|257829042|gb|EEV55649.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,408] Length = 419 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 111/417 (26%), Positives = 183/417 (43%), Gaps = 16/417 (3%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAV 67 L V+ LA +TP Y Y + + L+F F DT V YA KA + Sbjct: 3 ELIIGGVTASTLAEKYKTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEM 62 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G GLD+VS GE+ AL A P + I F G KT +E+ AL++ + ++ Sbjct: 63 LRLVHEYGFGLDVVSGGEIYTALQADFPKDAIYFHGNNKTPEELSYALENELLHVVADNL 122 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY--A 185 E++ L + + KK + R+N + A+TH+ I T + KFG+ A Sbjct: 123 MEVELLEELSQRYSKKVDVMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLI 182 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 +++ G HIGSQI + ++ L ++ +++GGG GI Y Sbjct: 183 KESSYLELEGFHAHIGSQIFDVTAWLAEIDKLTSYL----TDFDQPLSLNLGGGFGIRYT 238 Query: 246 SDHRPPSS-------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + +P +Y ++++EPGR +V + G + + IKK+ Sbjct: 239 QNDQPIPIEEALKKLIEYTEESLDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPH 298 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K + +D M D +RP LY A ++ + + I G +CE+GD + + Sbjct: 299 KKYYFVDGGMTDNIRPALYQAAYDCDLAEK-LSEEKTEKVTIAGKMCESGDVVIKETYLP 357 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GDLL + TGAYG S YN + VN Q ++ R F +L+ + Sbjct: 358 KAKSGDLLAVYSTGAYGYSMSSNYNRATRPAVVFVNNGQSRLVVRRQAFSDLLRGEV 414 >gi|111018490|ref|YP_701462.1| diaminopimelate decarboxylase [Rhodococcus jostii RHA1] gi|110818020|gb|ABG93304.1| diaminopimelate decarboxylase [Rhodococcus jostii RHA1] Length = 473 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 113/428 (26%), Positives = 189/428 (44%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + + + +LA TP + + AF G V YA KA + Sbjct: 46 DGVVSLAGIPVTELAEKYGTPLFVVDEDDFRSRCRDMARAF-GPTAKVHYASKAFLCGEI 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ S GEL AL A PAERI G K++ E++ A+ + + ++S Sbjct: 105 ARWVADEGLSLDVASGGELAVALHAGFPAERIAMHGNNKSVAELNAAVSARVGHIVLDSA 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAYA 185 +E+ L++ A G + RV + A+TH+ IST ++ KFG + + Sbjct: 165 TEIDRLDKVAAEAGVVQDVLIRVTVGVEAHTHEFISTAHEDQKFGFSLAGGKAIDAVRRV 224 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGL 240 +++ G+ HIGSQI ++ F A + + + I ID+GGG+ Sbjct: 225 FAAGNLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVAEFGVEKTAQISIIDLGGGM 284 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISI 293 GI+Y PP A+ + N + + +EPGR + + + +V +I Sbjct: 285 GISYVPSDDPPPVDQLAAKLGDIVRNESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTI 344 Query: 294 KKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 K + +V +D M+D +R LY A +E +V+ D + + +VG CE+G Sbjct: 345 KDVTVGANLTRRYVSVDGGMSDNIRTALYQAEYE-AKLVSRVSDAAPVVSRVVGKHCESG 403 Query: 349 DFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + + GDLL + TGAY S YN + V Q +I R T Sbjct: 404 DVVIRDTWMPEDIDAGDLLAVAATGAYCYSMSSRYNLLARPAVVAVRDGQSRVILRRETV 463 Query: 408 QELIELDS 415 ++L+ L+ Sbjct: 464 EDLLSLEV 471 >gi|291302993|ref|YP_003514271.1| diaminopimelate decarboxylase [Stackebrandtia nassauensis DSM 44728] gi|290572213|gb|ADD45178.1| diaminopimelate decarboxylase [Stackebrandtia nassauensis DSM 44728] Length = 468 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 113/423 (26%), Positives = 185/423 (43%), Gaps = 17/423 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQA 66 G L V + KLA T Y F +F D V YA K+ +A Sbjct: 46 GVLTVGGVDVNKLAAEFGTAAYVVDEADFRSRLRDFRGSFSANFPDGAVYYAGKSFLCKA 105 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + +A G LDI + GEL A+AA P ER+ F G K+ E+ AL +G+ ++S Sbjct: 106 VARWVAEEGVNLDICTGGELATAVAAGFPGERLAFHGNNKSEAELAAALDAGVGTIVLDS 165 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E++ L + A G + + R + A+TH+ I+T ++ KFG+ + + Sbjct: 166 RIEVERLTRLAKQRGVRPGVMVRTKVGVEAHTHEYIATAHEDQKFGLSLEAAVKAAKHIL 225 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYH 245 + + G+ HIGSQI + +F A + + +Q R G + + +GGG GIAY Sbjct: 226 AADVLHLKGLHSHIGSQIFETTAFEVAARRVIGAHEQIQRETGKTLPELGLGGGFGIAYT 285 Query: 246 SDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSA- 297 + P S A + + + I +EPGR + + +V ++K Sbjct: 286 TQDDPQSPRQLADGLRKIVDHECDNLGIDIPSITVEPGRAISGPTTFTLYEVGTVKSVDL 345 Query: 298 ----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 +++V +D M+D +R +Y A + + + D I +VG CE GD I Sbjct: 346 GAGRVRSYVSVDGGMSDNIRTAMYGATY-SVTLASRLSDAPPILGRVVGKHCEAGDIIVR 404 Query: 354 NRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 + + +PGDL+ + TGAY + YN P + V +I + +L+ Sbjct: 405 DEFLPGDIKPGDLIAVPGTGAYCRSMASNYNHVPRPPVVAVADGTARLIVRGESVDDLLN 464 Query: 413 LDS 415 LD Sbjct: 465 LDV 467 >gi|227552372|ref|ZP_03982421.1| diaminopimelate decarboxylase [Enterococcus faecium TX1330] gi|257895054|ref|ZP_05674707.1| diaminopimelate decarboxylase [Enterococcus faecium Com12] gi|293377961|ref|ZP_06624142.1| diaminopimelate decarboxylase [Enterococcus faecium PC4.1] gi|227178493|gb|EEI59465.1| diaminopimelate decarboxylase [Enterococcus faecium TX1330] gi|257831619|gb|EEV58040.1| diaminopimelate decarboxylase [Enterococcus faecium Com12] gi|292643508|gb|EFF61637.1| diaminopimelate decarboxylase [Enterococcus faecium PC4.1] Length = 419 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 111/417 (26%), Positives = 182/417 (43%), Gaps = 16/417 (3%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAV 67 L V+ LA +TP Y Y + + L+F F DT V YA KA + Sbjct: 3 ELIIGGVTASTLAEKYKTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEM 62 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G GLD+VS GE+ AL A P + I F G KT +E+ AL++ + ++ Sbjct: 63 LRLVHEYGFGLDVVSGGEIYTALQADFPRDAIYFHGNNKTPEELSYALENELLHVVADNL 122 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY--A 185 E++ L + + KK + R+N + A+TH+ I T + KFG+ A Sbjct: 123 MEVELLEELSQRYSKKVDVMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLI 182 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 +++ G HIGSQI + ++ L + +++GGG GI Y Sbjct: 183 KESSYLELEGFHAHIGSQIFDVTAWLAEIDKLTSYL----IDFDQPLSLNLGGGFGIRYT 238 Query: 246 SDHRPPSS-------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + +P +Y ++++EPGR +V + G + + IKK+ Sbjct: 239 QNDQPIPIEEALKKLIEYTEESLDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPH 298 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K + +D M D +RP LY A ++ + + I G +CE+GD + + Sbjct: 299 KKYYFVDGGMTDNIRPALYQAAYDCDLAEK-LSEEKTEKVTIAGKMCESGDVVIKETYLP 357 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GDLL + TGAYG S YN + VN Q ++ R F +L+ + Sbjct: 358 KAKSGDLLAVYSTGAYGYSMSSNYNRATRPAVVFVNNGQSRLVVRRQVFSDLLRGEV 414 >gi|254382308|ref|ZP_04997668.1| diaminopimelate decarboxylase [Streptomyces sp. Mg1] gi|194341213|gb|EDX22179.1| diaminopimelate decarboxylase [Streptomyces sp. Mg1] Length = 463 Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats. Identities = 120/407 (29%), Positives = 184/407 (45%), Gaps = 12/407 (2%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +LA TP + +++AF G D V YA KA ++AV+K L G L Sbjct: 56 TELAQEFGTPAFFLDEEDFRARCRAWAHAF-GPDADVFYAGKAFLSKAVVKWLKEEGLNL 114 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D+ S GEL ALAA +PA RI F G K++ E+ A+++G+ ++S E+ + A Sbjct: 115 DVCSGGELTTALAAGMPAARIAFHGNNKSVAEVTRAVEAGVGRIVLDSFQEIARVAHIAR 174 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYAYASTLPGVKISGV 196 G + P+ RV + A+TH+ I+T ++ KFGI + A +++ GV Sbjct: 175 ERGVRQPVQIRVTVGVEAHTHEFIATAHEDQKFGIAVADGSAAEAVRRALGHDSLELLGV 234 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSSD 255 HIGSQI + F + K + L +R + ID+GGGLGIAY S P + Sbjct: 235 HSHIGSQIFDMAGFEVSAKRVVRLLAAVRDEHGVELPEIDLGGGLGIAYTSADDPREPHE 294 Query: 256 YASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 A +H+ +I +EPGR +V + +V +IK + Sbjct: 295 IAKALHEIVARECEAAGLRAPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGG 354 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLY 367 T +V+ D + +VG CE+GD + + + PGDLL Sbjct: 355 MSDNIRTALYDAEYAVTLVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLLA 414 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + TGAY + YN L P + V Q +I R T ++L+ LD Sbjct: 415 VPATGAYCRSMASNYNHALRPPVVAVRDGQGRVIVRRETEEDLLRLD 461 >gi|257897662|ref|ZP_05677315.1| diaminopimelate decarboxylase [Enterococcus faecium Com15] gi|257835574|gb|EEV60648.1| diaminopimelate decarboxylase [Enterococcus faecium Com15] Length = 419 Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats. Identities = 105/413 (25%), Positives = 171/413 (41%), Gaps = 8/413 (1%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAV 67 L V+ LA QTP Y Y + + L+F F DT V YA KA + Sbjct: 3 ELIIGGVTASTLAEKYQTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEM 62 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G GLD+VS GE+ AL A P + I F G KT +E+ AL++ + ++ Sbjct: 63 LRLVHEYGFGLDVVSGGEIYTALQADFPRDAIYFHGNNKTPEELIYALENELLHVVADNL 122 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY--A 185 E++ L + + KK + R+N + A+TH+ I T + + KFG+ A Sbjct: 123 MEVELLEELSQRYSKKVDVMLRLNVGVEAHTHEYIVTARIDSKFGMSYESKECQQALQLI 182 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 +++ G HIGSQI + ++ L G Sbjct: 183 KESSYLELEGFHAHIGSQIFDVTAWLAEIDKLTSYLTDFEQPLSLNLGGGFGIRYTQNDQ 242 Query: 246 SDHRPPSSSDYASLIHQYFGNL---QCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 + + ++++EPGR +V + G + + IKK+ K + Sbjct: 243 PIPIEEALKKLIEYTEEALDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYY 302 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +D M D +RP LY A ++ + + I G +CE+GD + + + Sbjct: 303 FVDGGMTDNIRPALYQAAYDCDLAEK-LSEEKTEKVTIAGKMCESGDVVIKETYLPKAKS 361 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GDLL + TGAYG S YN + VN Q ++ R F +L+ + Sbjct: 362 GDLLAVYSTGAYGYSMSSNYNRATRPAVVFVNNGQSRLVVRRQAFSDLLRGEV 414 >gi|294101240|ref|YP_003553098.1| diaminopimelate decarboxylase [Aminobacterium colombiense DSM 12261] gi|293616220|gb|ADE56374.1| diaminopimelate decarboxylase [Aminobacterium colombiense DSM 12261] Length = 430 Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats. Identities = 124/427 (29%), Positives = 192/427 (44%), Gaps = 15/427 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 L + +LA TP Y S TA+ + F +T YA KA A Sbjct: 5 KHLFWDGCDTVQLAQNYGTPLYVLSETAVRERCREVKKDFLCKYPNTRAVYASKAFLTMA 64 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ +A G GLD+VS GE+ A A P E+ +F G KT++E+ LAL++G+ +S Sbjct: 65 MVRIIASEGLGLDVVSGGEIYTAYRAGFPMEKTIFHGNNKTLEELQLALETGVGRIVADS 124 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAY 184 ESEL + A GK+A + RV P ++A TH+ ++TG KFG P+ I Sbjct: 125 ESELDIIEDAARRRGKRATLLLRVAPGVDAATHQYMATGHTASKFGFPLAGESISRTIQR 184 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGIA 243 + + G H+GSQ+ S A L G + ++VGGG G+ Sbjct: 185 IKGSENLVLKGFHFHVGSQLQSNRSHCLAVDALIKEMVLFSSDLGFVTEELNVGGGYGVP 244 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKS 296 H + I + + II+EPGR++V++ GI + KV SIK+ Sbjct: 245 EHEGEERKPLKYFTEGIMERVIAGCEQAGIPVPAIIIEPGRWIVSEAGITLYKVGSIKEI 304 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 T+V +D M D RP LY A + N A + IVG CE+GD + + Sbjct: 305 PGVMTYVSVDGGMTDNPRPALYGAKYWGVV-ANRADELAGKKVTIVGKCCESGDVLMKDV 363 Query: 356 KIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + D+L + TGAY + YN ++V ++I R +++L+ + Sbjct: 364 MVTDQITRDDILAVFNTGAYNFSMANNYNRLPRPAVVLVREGNAYVIVNRQDYEDLLSGE 423 Query: 415 SIPAWLQ 421 IP L+ Sbjct: 424 VIPDHLR 430 >gi|149911628|ref|ZP_01900239.1| probable diaminopimelate decarboxylase protein [Moritella sp. PE36] gi|149805298|gb|EDM65312.1| probable diaminopimelate decarboxylase protein [Moritella sp. PE36] Length = 441 Score = 249 bits (635), Expect = 8e-64, Method: Composition-based stats. Identities = 163/429 (37%), Positives = 247/429 (57%), Gaps = 17/429 (3%) Query: 3 AFKY----FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA 58 +Y + +L ENVS+++LA V TPFYCYS A+ N AF+ + + YA Sbjct: 7 HLRYLPYAQQQTLWLENVSIKQLASQVATPFYCYSKAALLNNIHACKAAFEAENIHIHYA 66 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KANSN ++++ +A G G+DIVS GE+ RAL+A A+ IVFSGVGKT E+ A+ +G Sbjct: 67 MKANSNLSLLRIVAEQGLGVDIVSIGEMHRALSAGFDAQDIVFSGVGKTTAELTAAVLAG 126 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + FN+ES+ EL L A + RVNP++ +THK I+TG K +KFG+ + Sbjct: 127 VGQFNLESKEELAVLITIANKHQQLLSALIRVNPEVTVDTHKNITTGAKGNKFGVNFDAV 186 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + A P ++I+G+ MHIGSQI + A ++ L +L++ G+ + +D+GG Sbjct: 187 LPMLETAKHSPFIQINGLAMHIGSQIHTTAPYLDAIAKIQTLISELKTQGYPLTELDLGG 246 Query: 239 GLGIAYHSDHR-----------PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 G G+ Y + SD++ I + Q +I +EPGR LVAD+G++V Sbjct: 247 GFGVQYKDHQMLTSNTGGSGSDSLAFSDFSQAIRSALPHWQGRISIEPGRSLVADIGVMV 306 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 +++ IK+S +FV+LD AMND MRP LY A H + + +P RL D+VGPICE+ Sbjct: 307 SEITYIKESQPTSFVVLDAAMNDLMRPALYQATHALIPVKSPFTSRLTE-YDVVGPICES 365 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 D A + ++ GDL+ TGAY AV S +YNSR + E++V+ Q ++IR +T Sbjct: 366 TDTFAKSAQLPNDLAAGDLMCFLYTGAYCAVMSNSYNSRPIAAEVLVDDDQAYVIRQAIT 425 Query: 407 FQELIELDS 415 + LI + Sbjct: 426 QENLIAFEQ 434 >gi|126661847|ref|ZP_01732846.1| diaminopimelate decarboxylase [Flavobacteria bacterium BAL38] gi|126625226|gb|EAZ95915.1| diaminopimelate decarboxylase [Flavobacteria bacterium BAL38] Length = 401 Score = 249 bits (635), Expect = 8e-64, Method: Composition-based stats. Identities = 122/406 (30%), Positives = 191/406 (47%), Gaps = 20/406 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L++LA +P Y Y I Y NAF + V YA+KA SN +V+ L LGS Sbjct: 6 LKQLATEFGSPLYVYDAEKIAFQYNRLQNAFKKVERFKVHYAVKALSNISVLNYLKSLGS 65 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GLD VS E+ L A I+++ G +++EI+ G+ + ++ Sbjct: 66 GLDTVSIQEVLLGLHAGFDPRDIIYTPNGVSMEEIETVANFGVQINIDNLS-----ILEQ 120 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + P+ R+NP + A + IS G + KFGI IHQ+ + I+G+ Sbjct: 121 FGTKHPNVPVCIRINPHVMAGGNANISVGHIDSKFGISIHQLPHILRIIENTKM-HINGI 179 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MH GS I +E F A ++L + N ++ ID G G + Y D + ++ Sbjct: 180 HMHTGSDILDVEVFLYAAEILF----ETAKNFKDLDFIDFGSGFKVPYKKDDIETNVEEF 235 Query: 257 ASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + + + F + + EPG+FLV++ G + KV +K++ F +D N Sbjct: 236 GTKLTKRFLAFEKEYGRPLTLAFEPGKFLVSEAGYFLAKVNVVKQTTSTVFAGIDSGFNH 295 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 +RP LY + H I I NP G + +VG ICET D A NR+I+ GD+L Sbjct: 296 LIRPMLYGSQHHIENISNPKGKER--YYSVVGYICET-DTFASNRRISEIHEGDILCFRN 352 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GAY + YNSRL E++ + H+IR R TF ++++ + Sbjct: 353 AGAYCFSMASNYNSRLKPAEVLWKDGKGHLIRERETFDDILKNQVM 398 >gi|219850262|ref|YP_002464695.1| diaminopimelate decarboxylase [Chloroflexus aggregans DSM 9485] gi|219544521|gb|ACL26259.1| diaminopimelate decarboxylase [Chloroflexus aggregans DSM 9485] Length = 444 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 113/423 (26%), Positives = 185/423 (43%), Gaps = 15/423 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKA 61 +G L + LA TP Y + + AF V YA KA Sbjct: 13 TVVDGRLWVGGCDVVALADQFGTPLYLLDEVTLRGAMRAYRQAFAATYPGPFRVHYAGKA 72 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N A+ + +A G GLD+VS EL A A +P + G K+ E++ AL + Sbjct: 73 LLNTALAQIVAQEGLGLDVVSATELLVARRAGMPMAHVHLHGNAKSDAELERALTWQVGA 132 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V++ EL L + L + + R+ P I A+TH I+TG + KFG+P+ + Sbjct: 133 IVVDNLDELARLRAMSARLAEPQGVLLRIAPAIEADTHSHIATGGEAAKFGLPLAALDEA 192 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH-IDVGGGL 240 A PG++ G+ HIGSQ+ ++ ++L +LR + GGGL Sbjct: 193 VAQTLAAPGLRWLGLHAHIGSQLFALDQVVATVEVLVSQAARLRERFGVTPVELSPGGGL 252 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISI 293 G+ Y +D YA ++ + + +EPGR +VA G+ + +V+ Sbjct: 253 GVPYTADQPSTDRFRYAQVVSEALQAACARYNLPLPRLTVEPGRSIVARAGVALYRVVGR 312 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K + ++ +D M D +RP LY A + + N AG+ + G CE+GD + Sbjct: 313 K---GRRWLNVDGGMADNIRPALYGARY-SAVLANRAGEPAGEPVAVGGRYCESGDVLLR 368 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + +PGDL+ + GAY S YN ++V + H+I+ R T +++ Sbjct: 369 EIALPPAQPGDLIAVATAGAYTLSMSSNYNLVPRPALVLVGNGRAHVIQRRETEDDVLAR 428 Query: 414 DSI 416 D + Sbjct: 429 DVV 431 >gi|253582415|ref|ZP_04859638.1| diaminopimelate decarboxylase [Fusobacterium varium ATCC 27725] gi|251835954|gb|EES64492.1| diaminopimelate decarboxylase [Fusobacterium varium ATCC 27725] Length = 434 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 113/426 (26%), Positives = 189/426 (44%), Gaps = 14/426 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 K G L + + +LA TP Y + IE+N + + N F DT + YA KA Sbjct: 7 MKAENGILEIGGIKVTELAEKYGTPLYIMDQSLIEENIIKYKNNFKSSKFDTSIVYASKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 ++A+ + + +D VS GEL + +P +++ G KT +E+++ L I Sbjct: 67 FLSKAICQLVEKYDIEIDAVSGGELYTIKTSGLPMKKVHMHGNNKTDEELEMCLDYEIGS 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 +++E E++ L++ KK + R+N I+A+TH+ I T K KFG I Sbjct: 127 IIIDNEEEIERLSRICKEKNKKIKVMMRINIGIDAHTHEYIKTSKHSSKFGESIFDERIT 186 Query: 182 YA--YASTLPGVKISGVDMHIGSQIDQIESFHKAFK-LLRDLTQQLRSNGHNIQHIDVGG 238 ++ G HIGSQI ++FH+ + ++++ + G I I++GG Sbjct: 187 EIVGKIVKDENMEFLGFHCHIGSQIFDTKAFHEGIESMVKETKKISEVLGIYIPEINLGG 246 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVI 291 G G+ Y + + ++ K+ +EPGR +VA+ G + V Sbjct: 247 GFGVYYTEKDTAIDVEQFMKSMIEHLERSLEAEKMKLKKVSIEPGRSIVANAGSTLYTVG 306 Query: 292 SIKK-SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 K ++ +D M D +RP LY A +E N + I G CE+GD Sbjct: 307 GTKTTYGGVKYIFIDGGMTDNIRPALYQAEYEAVV-ANKINEPAEDVVTIAGKCCESGDL 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 I N K+A GDL+ + TGAYG S YN + V + + R + ++L Sbjct: 366 IIKNGKLAKAETGDLILVATTGAYGYSMSNNYNKAPKPAVVFVKDGKSALSIKRESLEDL 425 Query: 411 IELDSI 416 + D + Sbjct: 426 VRNDVL 431 >gi|123966414|ref|YP_001011495.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9515] gi|123200780|gb|ABM72388.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9515] Length = 457 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 122/425 (28%), Positives = 198/425 (46%), Gaps = 12/425 (2%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD---TMVCYALKANSNQA 66 L+ S+E L ++P Y + + + A + ++ YA KANS+ Sbjct: 33 KLNIGGCSIEDLVKKYESPLYILDEITLRNSCRAYKKALEKYYRGVSLPIYASKANSSLF 92 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + +A G GLD VSEGEL AL VP E+IVF G K+ EI A++ V++ Sbjct: 93 MSNLVASEGFGLDAVSEGELLTALKGGVPNEKIVFHGNNKSDKEIAFAIK-NKIKVIVDN 151 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E +LK L + + SL I R P I +TH+ I TG + KFG I + L+ Sbjct: 152 EHDLKRLEEISNSLNFDLEIMIRFTPGIECHTHEYIRTGSFDSKFGFGIESLTKLFGVII 211 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 +K+ G+ HIGSQI ++E +++ ++ Q + GHNI+ ++VGGGLGI Y Sbjct: 212 KTKHLKLIGLHAHIGSQIFELEPHKDLGEIMVNVMLQAKKFGHNIKELNVGGGLGIKYTQ 271 Query: 247 DHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADK 299 + PPS ++ + K ++ EPGR +V+ G+ + K+ S K+ Sbjct: 272 EDDPPSIDEWIKTVSSSIEQACKKNKLDLPLLMCEPGRSIVSTAGVTIYKIGSFKEIPGI 331 Query: 300 TFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 +D M+D RP Y + + + +P + G CE+GD + ++ Sbjct: 332 RTYLSVDGGMSDNPRPITYQSNYSACLVNDPLNINSKNKYTVAGKHCESGDVLFKEIELG 391 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 + GDL+ + TGAY S YN ++V + II+ R + +L++ D +P Sbjct: 392 KCKTGDLICVFGTGAYNNSMSSNYNRIPKPAAVLVCNGEAEIIQKRESPHDLLKNDVLPD 451 Query: 419 WLQKT 423 Sbjct: 452 RFINQ 456 >gi|315924798|ref|ZP_07921015.1| diaminopimelate decarboxylase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621697|gb|EFV01661.1| diaminopimelate decarboxylase [Pseudoramibacter alactolyticus ATCC 23263] Length = 422 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 132/421 (31%), Positives = 196/421 (46%), Gaps = 12/421 (2%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAV 67 +L LA TP Y S I AFD G+ + YA KA +N A+ Sbjct: 4 NLTFAGFDTVALAKKYGTPLYVMSEDIIRDRIKAIRKAFDLTGVAYDINYAGKAFTNLAM 63 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD VS GE+ AL A PAERI F G K +DE+ A++ G+ V+SE Sbjct: 64 CRIIASEGISLDTVSRGEIMTALKAGFPAERICFHGNNKRVDELRYAVEYGVGHIVVDSE 123 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 EL L G + I FR++P + A+TH+ I TG ++ KFGIP Q ++ AS Sbjct: 124 DELARLETIQAETGAEIAIMFRISPGVEAHTHELIQTGTEDSKFGIPYQQAKAVVRKASQ 183 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 + G+ + G+ HIGSQI + F A + L Q L G + +++GGG GI Y + Sbjct: 184 MRGITVDGLHCHIGSQIVDDKPFVLAADRMLSLYQALVQEGVPLTTLNLGGGFGIPYLTG 243 Query: 248 HRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADKT 300 + Y + + K+++EPGRF+ + G+ + V ++K Sbjct: 244 DESFDTLKYIPQMVDHVKQWCRAEGLECPKLVVEPGRFIACEAGVTLYTVGTVKTIPGVR 303 Query: 301 FVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + +D MND RP LY A +E N + I G CE D + + Sbjct: 304 KYVAIDGGMNDNPRPALYGAQYEAFIC-NGKAEEQLESCRISGRACEN-DQLIAEMPLNQ 361 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P GD L + TGAY + YN ++++G + +I R T +EL+ D +P W Sbjct: 362 PTVGDTLMVTNTGAYNYTMASVYNRFGRPAVVLLSGDRDAVIVERETDEELLHFDRVPEW 421 Query: 420 L 420 L Sbjct: 422 L 422 >gi|296170234|ref|ZP_06851827.1| diaminopimelate decarboxylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895110|gb|EFG74828.1| diaminopimelate decarboxylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 472 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 117/427 (27%), Positives = 192/427 (44%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + L +LA TP + + AF G VCYA KA + Sbjct: 47 GVARIAGIPLTQLAQEYGTPLFVVDEDDFRSRCRELATAFGG-GHNVCYAAKAFLCSEIA 105 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G LD+ + GEL AL A P ERI F G K++ E+ A++ G+ ++S + Sbjct: 106 RWVDEEGLSLDVSTGGELAVALHAGFPPERITFHGNNKSVAELTSAVKVGVGYVVLDSIT 165 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AYAS 186 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ + ++ Sbjct: 166 EIERLDAIAGEAGVVQDVYVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMDAVRRVF 225 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-----HIDVGGGLG 241 +++ G+ HIGSQI ++ F A + L + + +D+GGGLG Sbjct: 226 ATDHLRLVGLHSHIGSQIFDVDGFEVAAHRVIGLLHHIADEFGVDKAGQVSTVDLGGGLG 285 Query: 242 IAYHSDHRPPSSSDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y PP ++ A+ + G ++++EPGR + I + +V Sbjct: 286 ISYLGTDDPPPVAELAAKLTAIVGSESAAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVK 345 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + A + +V +D M+D +R LYDA ++ + A D A IVG CETGD Sbjct: 346 DVDVSSIAQRRYVSVDGGMSDNIRTALYDAQYDARLVSR-ASDAPATLARIVGKHCETGD 404 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + + RPGDLL + TGAY S YN + V + +I R T Sbjct: 405 IVVRDTWVPDDLRPGDLLAVAATGAYCYSLSSRYNMICRPAVVAVRDGRSRLILRRETVD 464 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 465 DLLSLEV 471 >gi|126699670|ref|YP_001088567.1| diaminopimelate decarboxylase [Clostridium difficile 630] gi|255307059|ref|ZP_05351230.1| diaminopimelate decarboxylase [Clostridium difficile ATCC 43255] gi|115251107|emb|CAJ68938.1| Diaminopimelate decarboxylase [Clostridium difficile] Length = 430 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 121/425 (28%), Positives = 192/425 (45%), Gaps = 14/425 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKA 61 L+ VS +L+ QTP Y + + +N + F + V YA KA Sbjct: 7 MTVNNDELYIGGVSCLELSKKYQTPLYVFDEALVRQNCREYIEYFKAREGKNKVAYAGKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + + LD+VS GEL A + P E++ F G KT EI++ L G+ Sbjct: 67 FLPLYMCNLINEEQMCLDVVSGGELYTAYKSNFPMEKVFFHGNNKTKKEINMGLDLGVGK 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F V++ EL L GK I FR+ P I A+TH I TG+ + KFG + Sbjct: 127 FVVDNFYELDLLEALCEDKGKTQEIYFRITPGIEAHTHDYIKTGQIDSKFGFALVNGDLF 186 Query: 182 YAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGG 238 A S +K+ G+ HIGSQI +E + ++ +L ++++ + ID+GG Sbjct: 187 RAIEKLSEYKNIKLVGLHAHIGSQIFDVEPYIDTVDIMMNLVKEIKEKFNIQLTEIDLGG 246 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVI 291 G+G+ Y +P + ++ I +++EPGR +VA+ G + V Sbjct: 247 GVGVYYSEGDKPKTIKEFCETIITKAETSCKELGIEVPTLVIEPGRSIVANAGSTLYTVG 306 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 SIK D +D M D +RP+LY A +E + + + ++ H I G CE+GD Sbjct: 307 SIKDIKDVRVYVSVDGGMTDNVRPSLYQASYECSIVNKINHEAMN-HVTIAGKCCESGDI 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + I + GD+L TGAYG S YN + V II R ++++L Sbjct: 366 LIGDINIMDIKSGDILITTSTGAYGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQSYEDL 425 Query: 411 IELDS 415 + L+ Sbjct: 426 LALEI 430 >gi|322379176|ref|ZP_08053569.1| diaminopimelate decarboxylase [Helicobacter suis HS1] gi|322379661|ref|ZP_08053980.1| diaminopimelate decarboxylase [Helicobacter suis HS5] gi|321147923|gb|EFX42504.1| diaminopimelate decarboxylase [Helicobacter suis HS5] gi|321148407|gb|EFX42914.1| diaminopimelate decarboxylase [Helicobacter suis HS1] Length = 641 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 161/400 (40%), Positives = 231/400 (57%), Gaps = 4/400 (1%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL K A +TPFY Y + + +L F AF G +++CYALKANSN +++TLA G+ Sbjct: 6 SLLKAASEHKTPFYLYDLQGLTQVFLDFKEAFKGHKSLICYALKANSNLKILQTLAKEGA 65 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D VS E++RAL A +PA +I+FSG GK +EI AL+ I NVES +ELK + Q Sbjct: 66 GADCVSLYEVQRALLAGIPAYKIIFSGAGKLEEEIKEALRLKILFLNVESFAELKRIEQI 125 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A A I+ R+NP+I+A TH ISTG E+KFG+ + ++ +A P ++ G+ Sbjct: 126 ASEQKTPARISVRLNPNIDAITHPYISTGLFENKFGVEEKEAVQIFMFAKQSPFLEPVGL 185 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS--S 254 HIGSQ++ +E +A L DL + L ++G +++ +DVGGGLG+ Y + Sbjct: 186 HCHIGSQLNNLEPLRQACMKLADLARFLMASGIDLKFLDVGGGLGVDYSQEQDQTIIALD 245 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 DY+ I Q F L C II EPGR ++A G+L+T+V IK A K F I+D MNDF+RP Sbjct: 246 DYSEAIKQAFKGLDCTIICEPGRRIIAPNGVLITRVQYIKHRAHKCFAIVDAGMNDFLRP 305 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 LY A H I + DIVGP+CE+ D A + + + GDL+ + GAY Sbjct: 306 ALYQASHPIKVLKEQT--PTQKTYDIVGPVCESADCFAKSMLLPEIQEGDLIAFYQAGAY 363 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 G+ + YNSR I E+ + ++R R F +LI + Sbjct: 364 GSSMASRYNSRPQILELGITKEGISVLREREDFLDLILHE 403 >gi|284043252|ref|YP_003393592.1| diaminopimelate decarboxylase [Conexibacter woesei DSM 14684] gi|283947473|gb|ADB50217.1| diaminopimelate decarboxylase [Conexibacter woesei DSM 14684] Length = 423 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 116/412 (28%), Positives = 186/412 (45%), Gaps = 14/412 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQA 66 G+L +LA TP + + I + A D V +A KA A Sbjct: 21 GNLEIGGCDTVELAREFGTPAFVVAEDDICARARAYVEALRARHDDFDVLFASKAFPCTA 80 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + LA G D+ S GEL AL A+RI G K++ E++ A+ +G+ ++S Sbjct: 81 VYRVLAEEGLVCDVASGGELHLALRGGFDAKRIYLHGNAKSLAELEQAIDAGVGHIVLDS 140 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 ++ + Q A + G + RV P + TH KISTG+ + KFG + Sbjct: 141 FMDVDRVEQVAAARGVTQAVLIRVTPGVAGRTHAKISTGQADSKFGFGLDDARLAIERLR 200 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + + G+ MHIGSQ+ ++++ A + L L + GGGLG+AY + Sbjct: 201 GSDSLDLVGLHMHIGSQLLSLDAYRPAVEALAALGD--------FSTYNFGGGLGVAYTA 252 Query: 247 DHRPPSSSDYASLIHQYFGN---LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 +PP+ +Y + ++++EPGR LVA+ + + V ++K T+V Sbjct: 253 GQQPPAIEEYVEEKVRALHELIGTGKRLLIEPGRSLVANSTVTLYSVETVK-RNVSTWVG 311 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D M+D +RP LY + +E + P A + G CE+GD I + +A P+PG Sbjct: 312 VDGGMSDNLRPMLYGSVYEAFFADRPELAGSGETAHVAGKHCESGDVIVRDVPLADPKPG 371 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 D+L TGAYG + YN P I ++ R T+ +L D Sbjct: 372 DILVTPATGAYGHAMANNYNGIPRPPVIFCKDGDARVVVRRETYDDLARRDV 423 >gi|254975641|ref|ZP_05272113.1| diaminopimelate decarboxylase [Clostridium difficile QCD-66c26] gi|255093028|ref|ZP_05322506.1| diaminopimelate decarboxylase [Clostridium difficile CIP 107932] gi|255101185|ref|ZP_05330162.1| diaminopimelate decarboxylase [Clostridium difficile QCD-63q42] gi|255314770|ref|ZP_05356353.1| diaminopimelate decarboxylase [Clostridium difficile QCD-76w55] gi|255517445|ref|ZP_05385121.1| diaminopimelate decarboxylase [Clostridium difficile QCD-97b34] gi|255650555|ref|ZP_05397457.1| diaminopimelate decarboxylase [Clostridium difficile QCD-37x79] gi|260683653|ref|YP_003214938.1| diaminopimelate decarboxylase [Clostridium difficile CD196] gi|260687313|ref|YP_003218447.1| diaminopimelate decarboxylase [Clostridium difficile R20291] gi|306520503|ref|ZP_07406850.1| diaminopimelate decarboxylase [Clostridium difficile QCD-32g58] gi|260209816|emb|CBA63673.1| diaminopimelate decarboxylase [Clostridium difficile CD196] gi|260213330|emb|CBE04911.1| diaminopimelate decarboxylase [Clostridium difficile R20291] Length = 430 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 121/425 (28%), Positives = 193/425 (45%), Gaps = 14/425 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKA 61 L+ VS +L+ QTP Y + + +N + F + V YA KA Sbjct: 7 MTVNNDELYIGGVSCLELSKKYQTPLYVFDEALVRQNCREYIEYFKAREGKNKVAYAGKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + + LD+VS GEL A + P E++ F G KT +EI++ L G+ Sbjct: 67 FLPLYMCNLINEEQMCLDVVSGGELYTAYKSNFPMEKVFFHGNNKTKEEINMGLDLGVGK 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F V++ EL L GK I FR+ P I A+TH I TG+ + KFG + Sbjct: 127 FVVDNFYELDLLEALCEDKGKTQEIYFRITPGIEAHTHDYIKTGQIDSKFGFALVNGDLF 186 Query: 182 YAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGG 238 A S +K+ G+ HIGSQI +E + ++ +L ++++ + ID+GG Sbjct: 187 RAIEKLSEYKNIKLVGLHAHIGSQIFDVEPYIDTVDIMMNLVKEIKEKFNIQLTEIDLGG 246 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVI 291 G+G+ Y +P + ++ I +++EPGR +VA+ G + V Sbjct: 247 GVGVYYSEGDKPKTIKEFCETIITKAETSCKELGIEVPTLVIEPGRSIVANAGSTLYTVG 306 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 SIK D +D M D +RP+LY A +E + + + ++ H I G CE+GD Sbjct: 307 SIKDIKDVRVYVSVDGGMTDNVRPSLYQASYECSIVNKINHEAMN-HVTIAGKCCESGDI 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + I + GD+L TGAYG S YN + V II R ++++L Sbjct: 366 LIGDINIMDIKSGDILITTSTGAYGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQSYEDL 425 Query: 411 IELDS 415 + L+ Sbjct: 426 LALEI 430 >gi|86132344|ref|ZP_01050939.1| Diaminopimelate decarboxylase [Dokdonia donghaensis MED134] gi|85817263|gb|EAQ38446.1| Diaminopimelate decarboxylase [Dokdonia donghaensis MED134] Length = 401 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 117/403 (29%), Positives = 183/403 (45%), Gaps = 12/403 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLG 75 L + +P Y Y I Y +NAF + + YA+KA SN ++++ L LG Sbjct: 5 DLLNVVKSYGSPVYVYDADTITAQYNRLTNAFKSVKQLRLNYAVKALSNLSILQHLKGLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SGLD VS E++ L A +RI+F+ G ++ EI+ G+ + + Sbjct: 65 SGLDTVSIQEVQLGLKAGFTPDRIIFTPNGVSLGEIEEVAAMGVQINIDNLS-----ILE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + + P+ R+NP + A + IS G + KFGI IHQ+ + I+G Sbjct: 120 QFGTKHPETPVCIRINPHVMAGGNTNISVGHIDSKFGISIHQLPHVLRIVENTGM-NING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I+ F A ++L + +Q + Sbjct: 179 IHMHTGSDILDIDVFVYATEILFETAKQFSDLTFIDFGSGFKVPYKEGDIETNIEELGEK 238 Query: 256 YASLIHQYFGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + + + EPG+FLV++ G + +V +K++ F +D N +R Sbjct: 239 LGKRFNAFAKAYKKPLTLTFEPGKFLVSESGKFLVQVNVVKQTTSTVFAQVDSGFNHLIR 298 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P LY + HEIN I NP G +VG ICET D A NR+IA GD+L + GA Sbjct: 299 PMLYGSQHEINNISNPNGRERF--YSVVGYICET-DTFANNRRIAEISEGDILAFDNAGA 355 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 Y + YNSR E+++ G + H+IR R TF +LI + Sbjct: 356 YCFTMASNYNSRYRPAEVLIKGGKAHLIRKRETFDDLIANQVL 398 >gi|256847134|ref|ZP_05552580.1| diaminopimelate decarboxylase [Lactobacillus coleohominis 101-4-CHN] gi|256715798|gb|EEU30773.1| diaminopimelate decarboxylase [Lactobacillus coleohominis 101-4-CHN] Length = 438 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 112/419 (26%), Positives = 183/419 (43%), Gaps = 14/419 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V LAH TP Y I F + F + + V YA KA S+ A Sbjct: 14 GHLQIGGVDTLHLAHKYGTPLLVYDVARIRNQMQRFRDVFNQEAVQYEVSYASKAFSSVA 73 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + + +D+VS GEL A+ A P ++ F G K+ DE+ +AL + V++ Sbjct: 74 IYQVMKQEHAHIDVVSGGELATAIKAKFPLAKVSFHGNNKSRDELAMALDHEVGTIVVDN 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E++ L + + + + R+ P I A+T+ I+TG+ + KFG + + A Sbjct: 134 FHEIELLKELLANRTQTVDVQLRITPGIAAHTNSYIATGQVDSKFGFDVESGQADKALQQ 193 Query: 187 TLPGVKISGV--DMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L ++ HIGSQI ++ F A KL+ + + ++VGGG GI Sbjct: 194 LLAISQVHVTGLHAHIGSQIFDVQGFEGVARKLVEIAADWHQKYDFTAEVLNVGGGFGIK 253 Query: 244 YHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y S+ P + D+ + I +EPGR +V G + + S K Sbjct: 254 YSSEDHPINPEDFVRAIVQVVKKSIHEQNLVMPAIWIEPGRSIVGPAGYTLYTIGSRKDI 313 Query: 297 ADK-TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 ++V +D M D +RP LY+A +E I G CE+GD ++ + Sbjct: 314 PGLLSYVSVDGGMGDNIRPALYNAKYESVL-ARDPQAPTVETVKIAGKYCESGDILSEQQ 372 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + +PGD+L + TGAY + YN + V ++ R T+ +L +LD Sbjct: 373 DLPATQPGDILVMLDTGAYDYAMASNYNRNPRPAVVFVENGHDQLVIKRETYDDLTKLD 431 >gi|315224163|ref|ZP_07866003.1| diaminopimelate decarboxylase [Capnocytophaga ochracea F0287] gi|314945896|gb|EFS97905.1| diaminopimelate decarboxylase [Capnocytophaga ochracea F0287] Length = 398 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 121/406 (29%), Positives = 191/406 (47%), Gaps = 20/406 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLG 75 L +A+ +P Y Y I Y +NAF + + YA+KA SN +++K + LG Sbjct: 5 DLLNIANTYGSPVYVYDAQKIASQYNRLTNAFASVPKLRINYAMKALSNISILKLMKDLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD VS E++ L A ++I+F+ G ++DEI+ A++ G+ + Sbjct: 65 AGLDTVSIQEVQLGLLAGFDPQQIIFTPNGVSMDEIEEAMRLGVQLNIDNLS-----FLE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + + P+ R+NP + A + IS G + KFGI IHQI + I+G Sbjct: 120 QFGTQHPEIPVCIRINPHVMAGGNSNISVGHIDSKFGISIHQIPHILRIVENTKM-HING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I+ F A ++L + + ++Q ID G G + Y + + Sbjct: 179 IHMHTGSDILDIDVFLYAAEILF----ETAKHFKDLQFIDFGSGFKVPYKEGDIQTNIEE 234 Query: 256 YASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + F + + EPG+FLV++ G + KV +K++ F +D N Sbjct: 235 LGERLSSRFADFCKEYGRNLTLAFEPGKFLVSEAGYFLVKVNVVKQTTSTVFAGVDSGFN 294 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 +RP Y A H I I NP G + +VG ICET D A NR+IA GD+L Sbjct: 295 HLIRPMFYGANHYIENISNPEGKKRF--YSVVGYICET-DTFASNRQIAEITEGDILCFH 351 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY + YNSRL E++ + +IR TF++L+ Sbjct: 352 NAGAYCYTMASNYNSRLRPAEVLWQNGEAKLIRKAETFEDLLRGQI 397 >gi|302537812|ref|ZP_07290154.1| diaminopimelate decarboxylase [Streptomyces sp. C] gi|302446707|gb|EFL18523.1| diaminopimelate decarboxylase [Streptomyces sp. C] Length = 445 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 122/418 (29%), Positives = 188/418 (44%), Gaps = 15/418 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L V L ++A TP Y + T+ AF D V YA KA ++A++ Sbjct: 30 GGLTVAGVELAEVAERFGTPVYVLDEGEVRGRCRTYKEAFPAAD--VYYAAKAFLSRAMV 87 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G GLD+ S GEL A+ A P ERIV G K+ ++ AL+ G+ ++S S Sbjct: 88 RWVHEEGLGLDVCSAGELELAVTAGFPPERIVLHGNAKSPRDLGSALRLGVGRIVIDSPS 147 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYAYAS 186 E+ + G + + RV P ++A H KI TG KFG+ A Sbjct: 148 EIARIAAAVGP-GDRQKVMVRVVPGVSAGGHDKIRTGTDGQKFGLSAADGSAARAVARVL 206 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGGGLGIAYH 245 P ++++G+ HIGSQI + E + A + + L +R + +D+GGG GIAY Sbjct: 207 AQPQLELTGLHCHIGSQITEAEPYLTALRRMVALMAGVRDAHGTVLPELDLGGGHGIAYR 266 Query: 246 SDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + A G ++ +EPGR +V G+ V +V+++K + D Sbjct: 267 PGEPALDVAVLARGLRDGLAEGCAAAGFPVPRLAVEPGRAVVGPAGVAVYRVLAVKHTGD 326 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 FV +D M+D RP LY + I A +VG CE GD +A ++ Sbjct: 327 TLFVAVDGGMSDNPRPALYGVRYAPRLIGRAPTAGPR-TATVVGRHCEAGDVLAAGVELP 385 Query: 359 -LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 RPGDL+ + GAY + YN P + V+ ++ R TF++L D Sbjct: 386 GDVRPGDLVAVPVAGAYHLSMASGYNMVGRPPVVAVHEGTARLLVRRETFEDLRRRDV 443 >gi|237785874|ref|YP_002906579.1| Diaminopimelate decarboxylase [Corynebacterium kroppenstedtii DSM 44385] gi|237758786|gb|ACR18036.1| Diaminopimelate decarboxylase [Corynebacterium kroppenstedtii DSM 44385] Length = 481 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 114/444 (25%), Positives = 187/444 (42%), Gaps = 32/444 (7%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+A + +G + V L LA+ TP ++AFDG V YA K Sbjct: 37 MNAHRDDDGQVAIAGVRLVDLANKYGTPLMVVDEDDFRARCRAMADAFDGPGH-VHYASK 95 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A + + +A G LD+ S+GEL AL A P ERI G K + A+Q+G+ Sbjct: 96 AFLTVGIARWVASEGLCLDVASDGELDVALRAGFPPERITVHGNNKLDSTLTKAVQAGVG 155 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 ++S E+ L + A G + + RV P ++A+TH+ I+T ++ KFG+ + + Sbjct: 156 HIVIDSRQEVDRLGKIARDAGVRQEVLIRVTPGVHADTHEFIATSHEDQKFGLSLACGAA 215 Query: 181 LYAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ---------------Q 223 A A + ++G+ H+GSQ+ + F A + L L + Sbjct: 216 KDAVLAAMDYDSLAVAGLHCHVGSQVFDADGFSLAAERLLGLMADLHHQLGRYGSDGGVE 275 Query: 224 LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL-------EPG 276 + ++ +D+GGG GIAY + P A + + EPG Sbjct: 276 KKDVKDSLDILDLGGGYGIAYSASDSPLDVRSVADDLKARVHKAAHDLHFDPPTLMVEPG 335 Query: 277 RFLVADVGILVTKVISIKKSAD-----KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 R + + V V +IK + ++ +D M+D +RP LY+A+++ I Sbjct: 336 RAIAGPSTVTVYTVGTIKDVPTDERSTRRYLAVDGGMSDNIRPALYNAHYDGRVINRLMH 395 Query: 332 DRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE 390 I +VG CE+GD + + GD + + TGAY S YN Sbjct: 396 GNP-IPTRLVGSHCESGDILVEDGIYPDDIEVGDRIALAGTGAYCFSMSSRYNMFCRPAV 454 Query: 391 IMVNGSQFHIIRPRMTFQELIELD 414 + V ++ R T +L+ LD Sbjct: 455 VAVRDGHERVMVRRETIDDLLALD 478 >gi|149919596|ref|ZP_01908075.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Plesiocystis pacifica SIR-1] gi|149819539|gb|EDM78967.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Plesiocystis pacifica SIR-1] Length = 430 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 109/417 (26%), Positives = 170/417 (40%), Gaps = 13/417 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G L V + +LA TP + + I AF V YA KA +A+ Sbjct: 18 DGRLQIAGVDILELAREFGTPLFVHDEDHIRARCRQAREAFPDG---VAYASKAFLCRAI 74 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G +D+ S GE+ AL A VPA+R+V G K+ E+ AL+ ++ V+S Sbjct: 75 AELAHEEGMHIDVASGGEMHLALQAGVPADRLVLHGNNKSTAELRYALEQRVHRVVVDSF 134 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHSLYAYA 185 EL + + R+ P + ANTH+ I TG+ + KFG + A Sbjct: 135 DELDRIEALVAEGLPAPRVLLRITPGVKANTHEFIQTGQDDSKFGFGVRVGHADRAIERA 194 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFK----LLRDLTQQLRSNGHNIQHIDVGG-GL 240 + P +++ G+ H+GSQ+ ++ SF K + + + N + GG G+ Sbjct: 195 AASPAIELVGLHAHVGSQVFEVGSFEKVAEVLAGIFARFQAKTGPNARMEELCIGGGLGV 254 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 A + KI EPGR ++A I + V +IK Sbjct: 255 AYVEGEADCGIVEWGQAVRRACAAAGISAKITAEPGRSIIASSAITLYTVGTIKDIPGVR 314 Query: 301 FV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA- 358 +D M+D RP LY + +E DR +VG CE+GD + + Sbjct: 315 TYVSVDGGMSDNPRPVLYGSGYETFLPRATDADRPK-TIRLVGKHCESGDLLVREGLVPA 373 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 R GD++ TGAYG YN + V Q + R T+ +L+ LD Sbjct: 374 DIRVGDIISTPVTGAYGYSLGSNYNKVPRPAVVFVKDGQARQVIRRETWDDLLRLDC 430 >gi|29827457|ref|NP_822091.1| diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] gi|29604556|dbj|BAC68626.1| putative diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] Length = 466 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 116/419 (27%), Positives = 189/419 (45%), Gaps = 15/419 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + VSL + A TP Y + + T+ AF D V YA KA +A+ Sbjct: 50 DGDVCVGGVSLTEAADRFGTPVYVLDEQEVRERCRTYRTAFPEAD--VVYAAKAFLCRAM 107 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G GLD+ S GEL A+ P E+IV G K+ +++ AL+ G+ V+S Sbjct: 108 AHWVQEEGLGLDVCSAGELALAVTTGFPPEKIVMHGNAKSPEDLRTALRLGVGRIVVDSA 167 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 SE+ L + + RV P I A H KI TG + FG+ + + +A Sbjct: 168 SEIARLAAIT-PCDTRQKVMVRVVPGIAAGGHTKIRTGTDDQNFGLSLTDGSAQHAITRI 226 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L P +++ G+ HIGSQI ++ + A + + L ++R + +++GGG IAY Sbjct: 227 LDQPHLELVGLHCHIGSQIAAVKPYVAAVRRMVGLMARVRDQHGVILPQLNIGGGHAIAY 286 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 + A + + ++ +EPGR +V G+ V +V+++K++ Sbjct: 287 RPGDETMNVGVLAGRVRAELEDGCARARLPVPRLTIEPGRAVVGPAGVAVYRVLAVKRTG 346 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + TFV +D M+D RP LY + I P+ +VG CE GD +A + Sbjct: 347 EHTFVAVDGGMSDNPRPALYGVRYAPRLIGRPSSAPSRF-VTVVGRHCEAGDVLADGVAL 405 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 RPGDLL + GAY + YN P + V+ ++ R + ++ D Sbjct: 406 PGDVRPGDLLAVPAAGAYHLSMTSGYNLVGRPPVVAVSDGIARVLVRRESLDDMSRRDV 464 >gi|256820962|ref|YP_003142241.1| diaminopimelate decarboxylase [Capnocytophaga ochracea DSM 7271] gi|256582545|gb|ACU93680.1| diaminopimelate decarboxylase [Capnocytophaga ochracea DSM 7271] Length = 398 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 119/406 (29%), Positives = 190/406 (46%), Gaps = 20/406 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLG 75 L +A+ +P Y Y I Y +NAF + + YA+KA SN +++K + LG Sbjct: 5 DLLNIANTYGSPVYVYDAQKIASQYNRLTNAFASVPKLRINYAMKALSNISILKLMKDLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD VS E++ L A ++I+F+ G ++DEI+ A++ G+ + Sbjct: 65 AGLDTVSIQEVQLGLLAGFDPQQIIFTPNGVSMDEIEEAMRLGVQLNIDNLS-----FLE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + + P+ R+NP + A + IS G + KFGI IHQI + I+G Sbjct: 120 QFGTQHPEIPVCIRINPHVMAGGNSNISVGHIDSKFGISIHQIPHILRIVENTKM-HING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I+ F A ++L + + ++Q ID G G + Y + + Sbjct: 179 IHMHTGSDILDIDVFLYAAEILF----ETAKHFKDLQFIDFGSGFKVPYKEGDIQTNIEE 234 Query: 256 YASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + F + + EPG+FLV++ G + KV +K++ F +D N Sbjct: 235 LGERLSSRFADFCKEYGRNLTLAFEPGKFLVSEAGYFLVKVNVVKQTTSTVFAGIDSGFN 294 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 +RP Y A H I I N + + +VG ICET D A NR+IA GD+L Sbjct: 295 HLIRPMFYGANHYIENISN--PEGKNRFYSVVGYICET-DTFASNRQIAEITEGDILCFH 351 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY + YNSRL E++ + +IR TF++L+ Sbjct: 352 NAGAYCYTMASNYNSRLRPAEVLWQNGEAKLIRKAETFEDLLRGQI 397 >gi|308375427|ref|ZP_07443849.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu007] gi|308346422|gb|EFP35273.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu007] Length = 470 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 114/427 (26%), Positives = 193/427 (45%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + + L +LA TP + + AF G V YA KA V Sbjct: 45 GVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVA 103 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + ++ G LD+ + GEL AL A P ERI G K++ E+ A+++G+ V+S + Sbjct: 104 RWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMT 163 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYAS 186 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ + ++ Sbjct: 164 EIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVF 223 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI ++ F A + + + I +D+GGGLG Sbjct: 224 ATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLG 283 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y PP ++ A S G K+++EPGR + I + +V Sbjct: 284 ISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVK 343 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D M+D +R LY A +++ + D + A +VG CE+GD Sbjct: 344 DVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSR-VSDAPPVPARLVGKHCESGD 402 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 I + + RPGDL+ + TGAY S YN + V+ ++ R T Sbjct: 403 IIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVD 462 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 463 DLLSLEV 469 >gi|308231803|ref|ZP_07413799.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu001] gi|308370005|ref|ZP_07419962.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu002] gi|308370683|ref|ZP_07422337.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu003] gi|308371932|ref|ZP_07426700.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu004] gi|308374279|ref|ZP_07435413.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu006] gi|308377688|ref|ZP_07480041.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu009] gi|308378900|ref|ZP_07484233.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu010] gi|308380036|ref|ZP_07488456.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu011] gi|308216082|gb|EFO75481.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu001] gi|308325586|gb|EFP14437.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu002] gi|308331250|gb|EFP20101.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu003] gi|308335066|gb|EFP23917.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu004] gi|308342559|gb|EFP31410.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu006] gi|308354994|gb|EFP43845.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu009] gi|308358942|gb|EFP47793.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu010] gi|308362850|gb|EFP51701.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu011] Length = 491 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 114/427 (26%), Positives = 193/427 (45%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + + L +LA TP + + AF G V YA KA V Sbjct: 66 GVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVA 124 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + ++ G LD+ + GEL AL A P ERI G K++ E+ A+++G+ V+S + Sbjct: 125 RWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMT 184 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYAS 186 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ + ++ Sbjct: 185 EIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVF 244 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI ++ F A + + + I +D+GGGLG Sbjct: 245 ATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLG 304 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y PP ++ A S G K+++EPGR + I + +V Sbjct: 305 ISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVK 364 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D M+D +R LY A +++ + D + A +VG CE+GD Sbjct: 365 DVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSR-VSDAPPVPARLVGKHCESGD 423 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 I + + RPGDL+ + TGAY S YN + V+ ++ R T Sbjct: 424 IIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVD 483 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 484 DLLSLEV 490 >gi|260186230|ref|ZP_05763704.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis CPHL_A] gi|289446888|ref|ZP_06436632.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis CPHL_A] gi|289419846|gb|EFD17047.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis CPHL_A] Length = 447 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 114/427 (26%), Positives = 193/427 (45%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + + L +LA TP + + AF G V YA KA V Sbjct: 22 GVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVA 80 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + ++ G LD+ + GEL AL A P ERI G K++ E+ A+++G+ V+S + Sbjct: 81 RWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMT 140 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYAS 186 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ + ++ Sbjct: 141 EIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVF 200 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI ++ F A + + + I +D+GGGLG Sbjct: 201 ATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLG 260 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y PP ++ A S G K+++EPGR + I + +V Sbjct: 261 ISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVK 320 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D M+D +R LY A +++ + D + A +VG CE+GD Sbjct: 321 DVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSR-VSDAPPVPARLVGKHCESGD 379 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 I + + RPGDL+ + TGAY S YN + V+ ++ R T Sbjct: 380 IIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVD 439 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 440 DLLSLEV 446 >gi|157878196|pdb|1HKV|A Chain A, Mycobacterium Diaminopimelate Dicarboxylase (Lysa) gi|157878197|pdb|1HKV|B Chain B, Mycobacterium Diaminopimelate Dicarboxylase (Lysa) Length = 447 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 114/427 (26%), Positives = 193/427 (45%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + + L +LA TP + + AF G V YA KA V Sbjct: 21 GVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVA 79 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + ++ G LD+ + GEL AL A P ERI G K++ E+ A+++G+ V+S + Sbjct: 80 RWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMT 139 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYAS 186 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ + ++ Sbjct: 140 EIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVF 199 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI ++ F A + + + I +D+GGGLG Sbjct: 200 ATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLG 259 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y PP ++ A S G K+++EPGR + I + +V Sbjct: 260 ISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVK 319 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D M+D +R LY A +++ + D + A +VG CE+GD Sbjct: 320 DVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSR-VSDAPPVPARLVGKHCESGD 378 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 I + + RPGDL+ + TGAY S YN + V+ ++ R T Sbjct: 379 IIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVD 438 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 439 DLLSLEV 445 >gi|15608433|ref|NP_215809.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis H37Rv] gi|15840743|ref|NP_335780.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis CDC1551] gi|31792486|ref|NP_854979.1| diaminopimelate decarboxylase LysA [Mycobacterium bovis AF2122/97] gi|121637222|ref|YP_977445.1| putative diaminopimelate decarboxylase lysA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661081|ref|YP_001282604.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis H37Ra] gi|148822511|ref|YP_001287265.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis F11] gi|167969618|ref|ZP_02551895.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis H37Ra] gi|215403133|ref|ZP_03415314.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis 02_1987] gi|215410930|ref|ZP_03419738.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis 94_M4241A] gi|215426613|ref|ZP_03424532.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis T92] gi|215430178|ref|ZP_03428097.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis EAS054] gi|215445470|ref|ZP_03432222.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis T85] gi|218752999|ref|ZP_03531795.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis GM 1503] gi|219557192|ref|ZP_03536268.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis T17] gi|224989697|ref|YP_002644384.1| putative diaminopimelate decarboxylase [Mycobacterium bovis BCG str. Tokyo 172] gi|253799661|ref|YP_003032662.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN 1435] gi|254231551|ref|ZP_04924878.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis C] gi|254364190|ref|ZP_04980236.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis str. Haarlem] gi|254550300|ref|ZP_05140747.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260200344|ref|ZP_05767835.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T46] gi|260204549|ref|ZP_05772040.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis K85] gi|289442732|ref|ZP_06432476.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis T46] gi|289554917|ref|ZP_06444127.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN 605] gi|289569303|ref|ZP_06449530.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T17] gi|289573956|ref|ZP_06454183.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis K85] gi|289745039|ref|ZP_06504417.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis 02_1987] gi|289749846|ref|ZP_06509224.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T92] gi|289753370|ref|ZP_06512748.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis EAS054] gi|289757393|ref|ZP_06516771.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis T85] gi|289761448|ref|ZP_06520826.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis GM 1503] gi|294994848|ref|ZP_06800539.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis 210] gi|297633843|ref|ZP_06951623.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis KZN 4207] gi|297730830|ref|ZP_06959948.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis KZN R506] gi|298524797|ref|ZP_07012206.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis 94_M4241A] gi|306802991|ref|ZP_07439659.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu008] gi|307083855|ref|ZP_07492968.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu012] gi|313658162|ref|ZP_07815042.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis KZN V2475] gi|61222668|sp|P0A5M4|DCDA_MYCTU RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|61222669|sp|P0A5M5|DCDA_MYCBO RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|1322417|emb|CAA97758.1| PROBABLE DIAMINOPIMELATE DECARBOXYLASE LYSA (DAP DECARBOXYLASE) [Mycobacterium tuberculosis H37Rv] gi|13880934|gb|AAK45594.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis CDC1551] gi|31618075|emb|CAD94186.1| PROBABLE DIAMINOPIMELATE DECARBOXYLASE LYSA (DAP DECARBOXYLASE) [Mycobacterium bovis AF2122/97] gi|121492869|emb|CAL71340.1| Probable diaminopimelate decarboxylase lysA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600610|gb|EAY59620.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis C] gi|134149704|gb|EBA41749.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis str. Haarlem] gi|148505233|gb|ABQ73042.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis H37Ra] gi|148721038|gb|ABR05663.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis F11] gi|224772810|dbj|BAH25616.1| putative diaminopimelate decarboxylase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321164|gb|ACT25767.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN 1435] gi|289415651|gb|EFD12891.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis T46] gi|289439549|gb|EFD22042.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN 605] gi|289538387|gb|EFD42965.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis K85] gi|289543057|gb|EFD46705.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T17] gi|289685567|gb|EFD53055.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis 02_1987] gi|289690433|gb|EFD57862.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T92] gi|289693957|gb|EFD61386.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis EAS054] gi|289708954|gb|EFD72970.1| diaminopimelate decarboxylase lysA (dap decarboxylase) [Mycobacterium tuberculosis GM 1503] gi|289712957|gb|EFD76969.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis T85] gi|298494591|gb|EFI29885.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis 94_M4241A] gi|308350365|gb|EFP39216.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu008] gi|308366490|gb|EFP55341.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu012] gi|323720250|gb|EGB29349.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis CDC1551A] gi|326902915|gb|EGE49848.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis W-148] gi|328459407|gb|AEB04830.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN 4207] Length = 447 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 114/427 (26%), Positives = 193/427 (45%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + + L +LA TP + + AF G V YA KA V Sbjct: 22 GVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVA 80 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + ++ G LD+ + GEL AL A P ERI G K++ E+ A+++G+ V+S + Sbjct: 81 RWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMT 140 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYAS 186 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ + ++ Sbjct: 141 EIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVF 200 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI ++ F A + + + I +D+GGGLG Sbjct: 201 ATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLG 260 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y PP ++ A S G K+++EPGR + I + +V Sbjct: 261 ISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVK 320 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D M+D +R LY A +++ + D + A +VG CE+GD Sbjct: 321 DVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSR-VSDAPPVPARLVGKHCESGD 379 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 I + + RPGDL+ + TGAY S YN + V+ ++ R T Sbjct: 380 IIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVD 439 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 440 DLLSLEV 446 >gi|289523768|ref|ZP_06440622.1| diaminopimelate decarboxylase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503460|gb|EFD24624.1| diaminopimelate decarboxylase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 425 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 116/417 (27%), Positives = 184/417 (44%), Gaps = 13/417 (3%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVI 68 L+ + L LA TP Y S + I+ + F ++ YA KA A+ Sbjct: 5 LYFDGCDLRDLASKYGTPLYVVSKSIIKDRCREIRDDFLNRYANSRAYYAGKAFLTIAMC 64 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G GLD+VS GE AL A PA IV G K EI+ A+ G+ V+ E Sbjct: 65 RLIKKEGLGLDVVSGGEFHLALKANFPAANIVLHGNNKLRQEIETAIDRGVGRIVVDWEG 124 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 EL +++ A S G++AP+ RV P++ A THK I TG + KFGIP+ ++ L + ++ Sbjct: 125 ELDLIDEIASSKGRRAPVLLRVTPEVEALTHKYIQTGHRGSKFGIPLERVPYLAEKSLSM 184 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 + + G+ H+GSQI+ + +A ++ +L L S+ I GG Sbjct: 185 EHIALKGLHFHLGSQIEDHRPYVQAIDVVTELMANLESDKGFILEELDIGGGFGIGAHGD 244 Query: 249 RPPSSSDYASLIHQYFGNLQCKII--------LEPGRFLVADVGILVTKVISIKKSADKT 300 Y +C +EPGR++V + GI + + +IK+ T Sbjct: 245 ASSKPLSYFVDPVMERLRARCSAFGVPLPSVAIEPGRWVVGEAGITLYTIGAIKEITGST 304 Query: 301 FV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA- 358 +D M D RP LY A ++ + + I + G CE+GD + N + Sbjct: 305 TYVSVDGGMADNPRPALYGAKYDAEVVGKEGLPKDRI-VTVAGRCCESGDILIENLSVPG 363 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 +PGDLL + TGAY + YN + V + + R T+ +L+ Sbjct: 364 DVKPGDLLAVFNTGAYNYSMASNYNMLPKPAVVFVENGKDFLAVDRETYDDLLAKQR 420 >gi|240169521|ref|ZP_04748180.1| diaminopimelate decarboxylase LysA [Mycobacterium kansasii ATCC 12478] Length = 468 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 117/427 (27%), Positives = 194/427 (45%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G V L +LAH TP + + AF G V YA KA + Sbjct: 43 GVACIAGVPLTELAHEYGTPLFVVDEDDFRSRCQEIAAAFGG-GHNVYYAAKAFLCSEIA 101 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G LD+ + GEL AL A P ERI G K++ E+ A+++G+ ++S Sbjct: 102 RWVEEEGLSLDVATGGELAVALHADFPPERITLHGNNKSVAELTAAVKAGVGHVVLDSMI 161 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYAS 186 E++ L+ A G + RV + A+TH+ IST ++ KFG+ + ++ Sbjct: 162 EIERLDAIAAQAGVIQDVLVRVTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVF 221 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-----RSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI + F A + L +++ + +D+GGGLG Sbjct: 222 AADHLRLVGLHSHIGSQIFDVAGFEIAAHRVIGLLREVVGEFGAEKTAQLSTVDLGGGLG 281 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y PP S+ A S G ++++EPGR + I + +V Sbjct: 282 ISYVPADDPPPISELAAKLSAILSNESAAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVK 341 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A++ +V +D M+D +R LYDA +++ + D + A +VG CE+GD Sbjct: 342 DVDVSATANRRYVSVDGGMSDNIRTALYDAEYDVRLVSR-VSDAPAVPARLVGKHCESGD 400 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 I + + RPGDLL + TGAY S YN + V + ++ R T Sbjct: 401 IIVRDTWMPEDLRPGDLLGVAATGAYCYSLSSRYNLIGRPAVVAVRRGKARLVLRRETVD 460 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 461 DLLSLEV 467 >gi|120435107|ref|YP_860793.1| diaminopimelate decarboxylase [Gramella forsetii KT0803] gi|117577257|emb|CAL65726.1| diaminopimelate decarboxylase [Gramella forsetii KT0803] Length = 411 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 124/405 (30%), Positives = 187/405 (46%), Gaps = 19/405 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L + +P Y Y I Y ++AF + + YA+KA SN +++K L LG Sbjct: 5 DLLSITKEFSSPVYVYDADKIISQYQRLTDAFKVNELRIHYAVKALSNISILKLLGSLGC 64 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GLD VS E+R L A V +I+++ G +++EI+ +Q G+ + ++ Sbjct: 65 GLDTVSVQEVRLGLKAGVDPSKIIYTPNGVSLEEIEEVVQLGVQINIDNLS-----VLEQ 119 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + K P+ R+NP + A + KIS G + KFGI IHQ+ L I+G+ Sbjct: 120 FGTKHPKIPVCIRINPHVMAGGNSKISVGHIDSKFGISIHQMPHLLRIVENTEM-HINGI 178 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MH GS I I F A ++L + N ++ ID G G + Y D Sbjct: 179 HMHTGSDILDIGVFLYASEILF----EAAKNFKELEFIDFGSGFKVPYREGDIETDIEDL 234 Query: 257 ASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + Q F + EPG+FLV++ G + KV IK++ F +D N Sbjct: 235 GVQLTQKFKKFCKEYGRELALAFEPGKFLVSESGKFLAKVNVIKQTTSTVFAGIDSGFNH 294 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 +RP Y ++H+I I NP +VG ICET D NR+I+ R GD+L Sbjct: 295 LIRPMFYGSHHDITNISNPNAKPRF--YSVVGYICET-DTFGNNRRISEIREGDILSFSN 351 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY + +NSR PE+M + H+IR R TF++L Sbjct: 352 AGAYCFSMASNFNSRYRPPEVMWYNGKAHLIRERETFEDLTRHQV 396 >gi|54023015|ref|YP_117257.1| putative diaminopimelate decarboxylase [Nocardia farcinica IFM 10152] gi|54014523|dbj|BAD55893.1| putative diaminopimelate decarboxylase [Nocardia farcinica IFM 10152] Length = 473 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 119/427 (27%), Positives = 189/427 (44%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + V + +LA TP + AF G D V YA KA + Sbjct: 47 GQVRLAGVPVRELAEQFGTPLFVVDEDDFRSRCRDMVRAF-GPDARVHYASKAFLCGEIA 105 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + L G LD+ S GEL AL A PAERI G K++ E++ A+ +G+ V+S Sbjct: 106 RWLRDEGLSLDVCSGGELAIALHAGFPAERIALHGNNKSVAELEAAVAAGVGHVVVDSLI 165 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E++ L A G + RV + A+TH+ IST ++ KFG I ++ A A Sbjct: 166 EIERLEAVAERAGVVQDVLVRVTVGVEAHTHEYISTAHEDQKFGFSIAGGDAMEALARVF 225 Query: 189 PGVKISGV--DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH-----IDVGGGLG 241 + V HIGSQI +I+ F A + + L + + +D+GGGLG Sbjct: 226 EASNLRLVGLHSHIGSQIFEIDGFEIAARRMLGLLRAAIDTFGVERTAQISTLDLGGGLG 285 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIK 294 I+Y + PP ++A+ + + I +EPGR + + V +V +IK Sbjct: 286 ISYLPEDNPPPLDEFAAKLRAIVAEEAARAGLPEPTIAVEPGRAIAGPGTVTVYEVGTIK 345 Query: 295 KSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +V +D M+D +RP LY A ++ + + + A +VG CE+GD Sbjct: 346 DVSLDAGLRRRYVSVDGGMSDNIRPALYQADYDCRLVSR-PSEAEAVLARVVGKHCESGD 404 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + + PGDL+ + TGAY S YN + V ++ R T Sbjct: 405 IVIRDTWMPADVGPGDLIAVAATGAYCYSMSSRYNQLTRPAVVAVRDGSARLVLRRETVA 464 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 465 DLLSLEV 471 >gi|289422579|ref|ZP_06424422.1| diaminopimelate decarboxylase [Peptostreptococcus anaerobius 653-L] gi|289157151|gb|EFD05773.1| diaminopimelate decarboxylase [Peptostreptococcus anaerobius 653-L] Length = 431 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 115/421 (27%), Positives = 183/421 (43%), Gaps = 14/421 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSN 64 G L ++ L +P + Y + F + +G D + YA KA Sbjct: 11 QNGQLEIAGITSMDLVDQYSSPLFVYDEDLVTNQCRRFHSVLEGSGLDYHISYASKAFIC 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + ++ +A GLD+VS GEL AL+A ++I G KT EI+ AL+ I CF + Sbjct: 71 KYLVGIMAEENMGLDVVSAGELYNALSAGFDPQKIHLHGNNKTDFEIEYALKEDIGCFVI 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E+K LNQ A + KK RV P + A+TH+ ISTG + KFG+ I + Sbjct: 131 DSFDEVKRLNQIAGQMSKKPRCLLRVTPGVEAHTHEYISTGSTDSKFGLNIDNGQAFKGV 190 Query: 185 ASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLG 241 A L + + G+ HIGSQI E A + + + + +++GGG G Sbjct: 191 ADILQAENLDLIGIHFHIGSQIFGTEGTRMAVDKVFGWFAKLKKDLDYTPSVLNIGGGFG 250 Query: 242 IAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y + I ++ LEPGR +V + + ++ +IK Sbjct: 251 IRYTDEDLSYPIETALDEIISCLKDSSKSNNLPIPQLWLEPGRSIVGEACTTLYRIGTIK 310 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + D +D M+D +R LY A +E + N + + G CE+GD IA Sbjct: 311 EIPDVRTYVSVDGGMSDHIRTALYQAKYE-VALANKMTAPIFGLYTLAGKCCESGDIIAY 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + K+ +P GD+ + TGAY + YN + V + R + ++LI+ Sbjct: 370 DVKLPMPEIGDIAAVSCTGAYHYSMASNYNQMPRPAVVFVKNGTSKLAIKRESMEDLIKN 429 Query: 414 D 414 Sbjct: 430 Q 430 >gi|326332897|ref|ZP_08199154.1| diaminopimelate decarboxylase [Nocardioidaceae bacterium Broad-1] gi|325949255|gb|EGD41338.1| diaminopimelate decarboxylase [Nocardioidaceae bacterium Broad-1] Length = 462 Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 123/423 (29%), Positives = 190/423 (44%), Gaps = 19/423 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G L V++ L + TP Y + F +AF G D V YA KA V Sbjct: 41 DGVLTVGGVAVPDLVANINTPAYVLDEVDFRERARAFRDAFTGYD--VYYAGKAFLCTEV 98 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ S+GEL AL A V +I + G KT E+ A+ +G+ V+S Sbjct: 99 ARWVAQEGLCLDVCSDGELSVALRAEVDPAKIGYHGNNKTPMELRRAIVAGVGRIIVDSF 158 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E++ ++ A G A + RV + A+TH+ I+T ++ KFG I + A Sbjct: 159 VEVERVSAIAAETGITARVMVRVTAGVEAHTHEYIATAHEDQKFGFSISSGDAFEAVRRL 218 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGGGLGIAY 244 L P V++ G+ HIGSQI F A + + L ++R +D+GGG GIAY Sbjct: 219 LAAPNVELRGLHSHIGSQIFDSSGFEVAARRVLALQARIRDELGTELPEMDLGGGFGIAY 278 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 + P + A + + + +EPGR +V V V ++K+ A Sbjct: 279 TTQDDPSTPKALAEELTAIVEHECRGFGLAVPHLSIEPGRAIVGPSMCTVYTVGTVKEVA 338 Query: 298 -----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 +T+V +D M+D +R LYDA + + + +VG CE GD + Sbjct: 339 LDGGVARTYVSVDGGMSDNIRTALYDADYSATLAGRASSAGP-VLGRVVGKHCEAGDIVV 397 Query: 353 LNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + PGDL+ + TGAYG + YN L P + V + +I R T +L Sbjct: 398 KHEFLPADIAPGDLIAVPGTGAYGRSMASNYNHALRPPVVAVRDGESRVIVRRETEADLF 457 Query: 412 ELD 414 D Sbjct: 458 ATD 460 >gi|257867192|ref|ZP_05646845.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC30] gi|257873527|ref|ZP_05653180.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC10] gi|257801248|gb|EEV30178.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC30] gi|257807691|gb|EEV36513.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC10] Length = 438 Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 116/431 (26%), Positives = 192/431 (44%), Gaps = 14/431 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKAN 62 + L+ + +LA TP Y YS + I + F T YA KA Sbjct: 4 EIKNNHLYIDGCDTVELAKTFGTPLYVYSVSEIREECQKIQAQFLTRYSKTRAAYAAKAF 63 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 A+++ + G LD+VS GEL A+ A PAE I F+G K+I+E+ AL G+ Sbjct: 64 CTTAMLQVIKSEGLSLDVVSGGELYTAIQADFPAEHIEFNGNNKSIEELAAALDYGVGRI 123 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V+ E+ + A I R+ P+++ +TH+ ISTG+K+ KFGIP+ + Sbjct: 124 IVDGIQEVGLIRALCQEKQVVAKILLRITPEVSVSTHQFISTGQKDSKFGIPLDEEILFP 183 Query: 183 --AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGG 239 P + G+ H+GSQ+ S A L Q + I+ ++VGGG Sbjct: 184 LVEEVIQAPELDFYGLHFHVGSQLSDNRSHLAAVDAALALVQTIHERFDYWIKELNVGGG 243 Query: 240 LGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 G+ Y S + + + + I++EPGR +VA+ GI + + S Sbjct: 244 FGVRYTDADIRQPYSYFLDPVMEKIDAFYAQHQSERPTIVIEPGRSIVAEAGISLHTIGS 303 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK +D M D +RP LY A + N A + I G CE+ D + Sbjct: 304 IKTLPGIRTYASIDGGMTDNIRPGLYQATYTGIL-ANRASEAATQKVTISGKACESTDIL 362 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + GDL TGAYG + +YN+ + + V Q + R ++++++ Sbjct: 363 VKDLALPPVETGDLFATFATGAYGYSMASSYNNLQIPAVVFVENGQAELAVKRQSYEQML 422 Query: 412 ELDSIPAWLQK 422 + + +P++L++ Sbjct: 423 QNEVVPSFLKE 433 >gi|227832874|ref|YP_002834581.1| Diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC 700975] gi|262182638|ref|ZP_06042059.1| Diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC 700975] gi|227453890|gb|ACP32643.1| Diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC 700975] Length = 445 Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 114/426 (26%), Positives = 190/426 (44%), Gaps = 20/426 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + VSL +LA TP Y + + AF G D V YA KA + + Sbjct: 21 DGVVSIGGVSLTELAEEYGTPLYVFDEQDFRSRCRDMAQAFGGPDH-VHYASKAFITKRI 79 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G LD+ S E + ALAA P ER+ G K + ++L + GI +++ Sbjct: 80 VRWVDEEGLCLDVASLNEAKLALAADFPPERMTAHGNNKEDEYLELCVNEGIGHVVLDNA 139 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AYA 185 EL LN A + G+ P+ RV P ++A+TH+ I+T ++ KFGI + + Sbjct: 140 EELSRLNSIAAAAGRVQPVMIRVKPGVDAHTHEFIATAHEDQKFGISLSTGAAFEVARTV 199 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAY 244 +K+ G+ H+GS + + F A + + L ++ G ++ +D+GGG GI Y Sbjct: 200 LESANLKLVGLHCHVGSSVFNADGFKLAAERVLSLYKRIHSELGVALEELDLGGGFGIPY 259 Query: 245 HSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKV------- 290 + A G +++EPGR LV + V +V Sbjct: 260 MEYEEALDVATLAKDLLDAVERTATELGIKPPFVLVEPGRSLVGASAVTVYRVGTVKDVE 319 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 + ++ +D M+D +RP LY + ++ +VN + + IVG CE+GD Sbjct: 320 TGKADLPMRRYLSVDGGMSDNIRPALYGSEYD-VRVVNRRTQGEPVDSRIVGFHCESGDI 378 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + R+ GDLL TGAY + + YN L + V + ++ R T ++ Sbjct: 379 LVNERRFPSDITTGDLLAFATTGAYQYMMASRYNGALRPAVVSVRDGKASLMLRRETMED 438 Query: 410 LIELDS 415 L+ LD Sbjct: 439 LLALDV 444 >gi|295133498|ref|YP_003584174.1| diaminopimelate decarboxylase [Zunongwangia profunda SM-A87] gi|294981513|gb|ADF51978.1| diaminopimelate decarboxylase [Zunongwangia profunda SM-A87] Length = 407 Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 117/402 (29%), Positives = 185/402 (46%), Gaps = 12/402 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLG 75 L +A +P Y Y IE Y ++AF + + YA+KA SN +++K + LG Sbjct: 5 DLLAIAAEYGSPVYVYDAEKIEAQYKRLTSAFSSIKKLRIHYAVKALSNISILKFIDKLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SGLD VS E++ + A V +I+F+ G +++EI+ + G+ + + Sbjct: 65 SGLDTVSIQEVQLGIKAGVDPSKIIFTPNGVSLEEIEKVAKLGVQINIDNLS-----ILE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + S K P+ R+NP + A + KIS G + KFGI IHQ+ L I+G Sbjct: 120 QFGSRHPKTPVCIRINPHVMAGGNSKISVGHIDSKFGISIHQMPLLKRIVENTGMT-ING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I+ F +A ++L D + ++ + Sbjct: 179 IHMHTGSDILDIQVFIQASEILFDAAKNFKNLEFIDFGSGFKVPYKEGDIETDIEELGTK 238 Query: 256 YASLIHQYFGNLQCKI--ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + ++ EPG++LV++ G + KV IK++ F +D N +R Sbjct: 239 LSEKFKAFCTEYGKELTLAFEPGKYLVSESGKFLAKVNVIKQTTSTVFAGIDTGFNHLIR 298 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P Y ++HEIN I N G + +VG ICET D A NR+I GD+L GA Sbjct: 299 PMFYGSHHEINNISNSNGKQRF--YSVVGYICET-DTFASNRRITEITEGDILAFSNAGA 355 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 Y S +NSR E++ + H+IR R TF +L+ Sbjct: 356 YCYSMSSNFNSRFRPAEVLWYKGEAHLIRERETFDDLLRHQI 397 >gi|255656024|ref|ZP_05401433.1| diaminopimelate decarboxylase [Clostridium difficile QCD-23m63] gi|296450547|ref|ZP_06892301.1| diaminopimelate decarboxylase [Clostridium difficile NAP08] gi|296879331|ref|ZP_06903326.1| diaminopimelate decarboxylase [Clostridium difficile NAP07] gi|296260622|gb|EFH07463.1| diaminopimelate decarboxylase [Clostridium difficile NAP08] gi|296429874|gb|EFH15726.1| diaminopimelate decarboxylase [Clostridium difficile NAP07] Length = 430 Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 121/425 (28%), Positives = 193/425 (45%), Gaps = 14/425 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKA 61 L+ VS +L+ QTP Y + + +N + F + V YA KA Sbjct: 7 MTVNNDELYIGGVSCLELSKKYQTPLYVFDEALVRQNCREYIKYFRAREGKNKVAYAGKA 66 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + + LD+VS GEL A + P E++ F G KT +EI++ L G+ Sbjct: 67 FLPLYMCNLINEEQMCLDVVSGGELYTAYKSNFPMEKVFFHGNNKTKEEINMGLDLGVGK 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F V++ EL L GK I FR+ P I A+TH I TG+ + KFG + Sbjct: 127 FVVDNFYELDLLEALCEDKGKTQEIYFRITPGIEAHTHDYIKTGQIDSKFGFALVNGDLF 186 Query: 182 YAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGG 238 A S +K+ G+ HIGSQI +E + ++ +L ++++ ++ ID+GG Sbjct: 187 RAIEKLSDYKNIKLVGLHAHIGSQIFDVEPYIDTVDIMMNLVKEIKEKFNIHLTEIDLGG 246 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVI 291 G+G+ Y +P + ++ I +++EPGR +VA+ G + V Sbjct: 247 GVGVYYSEGDKPKTIKEFCETIITKAETSCKELGIEVPTLVIEPGRSIVANAGSTLYTVG 306 Query: 292 SIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 SIK D +D M D +RP+LY A +E + + ++ H I G CE+GD Sbjct: 307 SIKDIKDVRVYVSVDGGMTDNVRPSLYQASYECSIVNKINHKAMN-HVTIAGKCCESGDI 365 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + I + GD+L TGAYG S YN + V II R ++++L Sbjct: 366 LIGDINIMDIKSGDILITTSTGAYGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQSYEDL 425 Query: 411 IELDS 415 + L+ Sbjct: 426 LALEV 430 >gi|325568636|ref|ZP_08144929.1| diaminopimelate decarboxylase [Enterococcus casseliflavus ATCC 12755] gi|325157674|gb|EGC69830.1| diaminopimelate decarboxylase [Enterococcus casseliflavus ATCC 12755] Length = 438 Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 116/436 (26%), Positives = 192/436 (44%), Gaps = 14/436 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKAN 62 + L+ + +LA TP Y YS + I + F T YA KA Sbjct: 4 EIKNNHLYIDGCDTVELAKTFGTPLYVYSVSEIREECQKIQAQFLTRYSKTRAAYAAKAF 63 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 A+++ + G LD+VS GEL A+ A PAE I F+G K+I+E+ AL G+ Sbjct: 64 CTTAMLQVIKSEGLSLDVVSGGELYTAIQADFPAEHIEFNGNNKSIEELAAALDYGVGRI 123 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V+ E+ + A I R+ P+++ +TH+ ISTG+K+ KFGIP+ + Sbjct: 124 IVDGIQEVGLIRALCQEKQVVAKILLRITPEVSVSTHQFISTGQKDSKFGIPLDEEILFP 183 Query: 183 --AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGG 239 P + G+ H+GSQ+ S A L Q + I+ ++VGGG Sbjct: 184 LVEEVIQAPELDFYGLHFHVGSQLSDNRSHLAAVDAALALVQTIHERFDYWIKELNVGGG 243 Query: 240 LGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 G+ Y S + + + + I++EPGR +VA+ GI + + S Sbjct: 244 FGVRYTDADIRQPYSYFLDPVMEKIDAFYAQHQSERPTIVIEPGRSIVAEAGISLHTIGS 303 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK +D M D +RP LY A + N A + I G CE+ D + Sbjct: 304 IKTLPGIRTYASIDGGMTDNIRPGLYQATYTGIL-ANRASEAATQKITISGKACESTDIL 362 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + GDL TGAYG + +YN+ + + V Q + R ++++++ Sbjct: 363 VKDLALPPVETGDLFATFATGAYGYSMASSYNNLQIPAVVFVENGQAELAVKRQSYEQML 422 Query: 412 ELDSIPAWLQKTPKQS 427 + + +P++L++ Sbjct: 423 QNEVVPSFLKEEASSK 438 >gi|159041106|ref|YP_001540358.1| diaminopimelate decarboxylase [Caldivirga maquilingensis IC-167] gi|157919941|gb|ABW01368.1| diaminopimelate decarboxylase [Caldivirga maquilingensis IC-167] Length = 402 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 118/408 (28%), Positives = 190/408 (46%), Gaps = 14/408 (3%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 VSL LA TP Y IE NY + ++ + V Y++KAN N A++ L L Sbjct: 9 GVSLVDLADKYDTPLIVYDLNLIEGNYRSIKDSL---NAKVLYSIKANPNLAILAFLRRL 65 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 GSG D S GE+ AL A ++++G + ++I GI V + ++ Sbjct: 66 GSGADAASPGEVFLALKAGFKPSEVLYTGAYLSNNDIKY----GIDSRVVLNFDSVRAFE 121 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + + FR++ ++ +E KFG+ ++ Y A + + Sbjct: 122 RAMALGYRPRLVFFRIDLGYGEGFTPGVTLAGEESKFGMFLNDAIKAYRLAKSNGVKEFG 181 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 M + ++ A L G I + D+GGG GI Y +P + Sbjct: 182 IHAMMGSNVLNPDYFLKIAELLKEQAKVIEGEVGIKISYFDMGGGFGIPYKPGEKPLDLN 241 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 ++ G ++ +EPGRF+V + G L+T+V +KK ++T++ +DV MN +RP Sbjct: 242 RLSA----LRGFFPGELWVEPGRFIVGNAGYLLTRVTEVKKKGNRTYIGVDVGMNVLIRP 297 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 LY+AYH I G + D+VGPICE D +A+NR++ + GDLL I GAY Sbjct: 298 MLYNAYHHIITCNEGEGSEI---VDVVGPICENTDKLAINRELPRVKEGDLLVILNAGAY 354 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQK 422 S YN RL E++V ++ + R R T L L IP+++Q+ Sbjct: 355 VYSMSSNYNGRLRPAEVVVYNNEHAVSRFRETLDSLTMLQVIPSFIQQ 402 >gi|297559297|ref|YP_003678271.1| diaminopimelate decarboxylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843745|gb|ADH65765.1| diaminopimelate decarboxylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 461 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 120/419 (28%), Positives = 181/419 (43%), Gaps = 13/419 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G L V + +LA TP + + AF D V YA KA +AV Sbjct: 44 GGELTVGGVGVRELAATHGTPLFVMDEEDFRGRARDYRTAFS--DADVYYAGKALLTKAV 101 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LD+ S GEL ALAA VPAERI G K+ E+ A+++G+ ++S Sbjct: 102 ARWVNEEGLKLDVCSGGELTVALAAGVPAERIGMHGNNKSAAELRRAVEAGVGRVIIDSL 161 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E++ L A LG + + RV + A+TH+ ++T + KFG + + A Sbjct: 162 DEIERLGAIAAELGARPKVLIRVTTGVEAHTHEFVATAHDDQKFGFAMSTGAAAEAVRRV 221 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKL-LRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 L P +++ G+ HIGSQI F A + R LT G + +D+GGGLGIAY Sbjct: 222 LAAPHLELVGLHSHIGSQIFDTSGFEVAARRVTRFLTGVHEELGVTLAELDLGGGLGIAY 281 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 S P A + +I +EPGR + GI V +V ++K Sbjct: 282 TSGDDPLDPKTIAGSLTSIVRRECEEAGLPVPRIAVEPGRAIAGPAGITVYEVGTVKDVE 341 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + T + +V+ D + + +VG CE+GD I + + Sbjct: 342 GIRTYVSVDGGMSDNIRTALYGSEYTSQLVSRESDAEPMLSRLVGKHCESGDIIVHDLYL 401 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 RPGDL+ + TGAY + YN + V G +I R ++L+ LD Sbjct: 402 PADLRPGDLVAVAATGAYCYSMASNYNHLPRPAMVAVRGGSSRVIVRRENEEDLLRLDV 460 >gi|118619175|ref|YP_907507.1| diaminopimelate decarboxylase LysA [Mycobacterium ulcerans Agy99] gi|118571285|gb|ABL06036.1| diaminopimelate decarboxylase LysA [Mycobacterium ulcerans Agy99] Length = 472 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 112/429 (26%), Positives = 196/429 (45%), Gaps = 22/429 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G V L +LA TP + + AF G V YA KA Sbjct: 45 EQGCARIAGVPLTELAREYGTPLFVIDEDDFRSRCQEIAAAFGG-GHNVNYAAKAFLCSE 103 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G +D+ + GEL AL A P ERI G K++ E+ A+++G+ ++S Sbjct: 104 IARWVNEEGLSIDVSTGGELAVALHANFPPERITLHGNNKSVAELTTAVKAGVGHIVLDS 163 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAY 184 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ I ++ Sbjct: 164 MIEIERLDAIAGEAGIVQDVFVRLTVGVEAHTHEFISTAHEDQKFGLSISSGAAMAAVRR 223 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-----HIDVGGG 239 +++ G+ HIGSQI ++ F A + L +++ + + + +D+GGG Sbjct: 224 VFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLREVVAEFGSEKTAQLAMVDLGGG 283 Query: 240 LGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKV-- 290 LGI+Y S PP + A G ++++EPGR + I + +V Sbjct: 284 LGISYLSSDDPPPVGELADKLGAIVSNESAAVGLPAPRLVVEPGRAIAGPGTITLYEVGT 343 Query: 291 ---ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 + + +A++ +V +D M+D +R LYDA +++ + D + A +VG CE+ Sbjct: 344 VKDVDVSATANRRYVSVDGGMSDNIRTALYDAQYDVRLVSR-VSDAPAMLARVVGKHCES 402 Query: 348 GDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 GD I + + +PGDL+ + TGAY S YN + V + ++ R T Sbjct: 403 GDIIVRDTWVPDDLQPGDLVAVAATGAYCYSLSSRYNMIGRPAVVAVRAGKARLVLRRET 462 Query: 407 FQELIELDS 415 +L+ L+ Sbjct: 463 VDDLLSLEV 471 >gi|41408567|ref|NP_961403.1| LysA_2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396925|gb|AAS04786.1| LysA_2 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 472 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 114/427 (26%), Positives = 193/427 (45%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G V++ +LA TP + ++AF G + V YA KA V Sbjct: 47 GVATIAGVAVTELAREYGTPLFVVDEDDFRSRCREIASAFGGGN-NVHYAAKAFLCSEVA 105 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G LD+ + GEL AL A P ERI F G K++ E+ A+++G+ ++S + Sbjct: 106 RWIDEEGLSLDVCTGGELAVALHADFPPERITFHGNNKSVAELTAAVKAGVGHVVLDSMT 165 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--YAS 186 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ + +L A Sbjct: 166 EIERLDAIAADAGIVQDVFVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAALAAVGRVF 225 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH-----IDVGGGLG 241 +++ G+ HIGSQI + F A + + L + +D+GGGLG Sbjct: 226 DTEHLRLVGLHSHIGSQIFDVAGFELAARRVIGLLHDAVEQFGVEKTAQIATVDLGGGLG 285 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y + PP + A G ++++EPGR + I + +V Sbjct: 286 ISYLAADDPPPMGELAGKLSAIVQHESAAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVK 345 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D M+D +R LYDA ++ + D A +VG CE+GD Sbjct: 346 DVDVSATAHRRYVSVDGGMSDNIRTALYDAQYDARLVSR-VSDAPAELARVVGKHCESGD 404 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + + RPGDL+ + TGAY S YN + V + ++ R T Sbjct: 405 IVVRDTWVPGDLRPGDLIGVAATGAYCYSLSSRYNMVCRPAVVAVRDGRARLVLRRETVD 464 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 465 DLLSLEV 471 >gi|317125576|ref|YP_004099688.1| diaminopimelate decarboxylase [Intrasporangium calvum DSM 43043] gi|315589664|gb|ADU48961.1| diaminopimelate decarboxylase [Intrasporangium calvum DSM 43043] Length = 475 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 128/434 (29%), Positives = 190/434 (43%), Gaps = 24/434 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFS----NAFDGM--DTMVCYALKA 61 +G L VS+ +LA TP Y F FD + V YA KA Sbjct: 43 DGVLAIGGVSVVELAREFGTPAYVLDEDDFRARAREFKQTYAEVFDDLCGGADVYYAGKA 102 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 V + + G LD+ + GEL A+ A VP I G K+ EI AL G+ Sbjct: 103 FLCTEVARWIRDEGLFLDVCTGGELAVAIRAGVPGSSIGMHGNNKSAAEIRAALDHGVSR 162 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V+S E++ + A LG AP+ RV + A+TH+ I+T ++ KFG + H++ Sbjct: 163 IIVDSFEEIERVAAIAAELGVIAPVLVRVTVGVEAHTHEFIATAHEDQKFGFSLAGGHAI 222 Query: 182 YAYASTLPGVK---ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVG 237 A L + G+ HIGSQI F + + + L Q+ R G + +D+G Sbjct: 223 EAVRQVLARPDTLRLLGLHSHIGSQIFDTAGFEVSARRVLGLHTQIARELGVELPELDLG 282 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKV 290 GG GIAY ++H P S A + + +I +EPGR + + +V Sbjct: 283 GGFGIAYTTEHDPQSPKALAVGMAEIVERECRADGVAVPRISIEPGRAIAGPSTFTLYEV 342 Query: 291 ISIKKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 ++K + +V +D M+D +R LYDA + N + A +VG C Sbjct: 343 GTVKPVELDGGASRLYVSVDGGMSDNIRTALYDADYSCTV-ANRRSEATPSLARVVGRHC 401 Query: 346 ETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPR 404 E+GD + + + PGDL+ + TGAY S YN P I V Q +I R Sbjct: 402 ESGDIVVKDEFLPGDVGPGDLVAVPGTGAYCRALSSQYNHTPRPPVIAVRDGQARVIVRR 461 Query: 405 MTFQELIELDSIPA 418 T +L+ LD PA Sbjct: 462 ETIDDLLALDVWPA 475 >gi|118464128|ref|YP_880747.1| diaminopimelate decarboxylase [Mycobacterium avium 104] gi|118165415|gb|ABK66312.1| diaminopimelate decarboxylase [Mycobacterium avium 104] Length = 472 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 115/427 (26%), Positives = 193/427 (45%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G V++ +LA TP + ++AF G + V YA KA V Sbjct: 47 GVATIAGVAVTELAREYGTPLFVVDEDDFRSRCREIASAFGGGN-NVHYAAKAFLCSEVA 105 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G LD+ + GEL AL A P ERI F G K++ E+ A+++G+ ++S + Sbjct: 106 RWIDEEGLSLDVCTGGELAVALHADFPPERITFHGNNKSVAELTAAVKAGVGHVVLDSMT 165 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--YAS 186 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ + +L A Sbjct: 166 EIERLDAIAADAGIVQDVFVRLTVGVEAHTHEFISTAHEDQKFGLSVASGSALAAVGRVF 225 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH-----IDVGGGLG 241 +++ G+ HIGSQI + F A + + L + +D+GGGLG Sbjct: 226 DTEHLRLVGLHSHIGSQIFDVAGFELAARRVIGLLHDAVEQFGVEKTAQIATVDLGGGLG 285 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y + PP + A G ++++EPGR + I + +V Sbjct: 286 ISYLAADDPPPMGELAGKLSAIVQHESAAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVK 345 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D M+D +R LYDA ++ + D A IVG CE+GD Sbjct: 346 DVDVSATAHRRYVSVDGGMSDNIRTALYDAQYDARLVSR-VSDAPAELARIVGKHCESGD 404 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + + RPGDL+ + TGAY S YN + V + ++ R T Sbjct: 405 IVVRDTWVPGDLRPGDLIGVAATGAYCYSLSSRYNMVCRPAVVAVRDGRARLVLRRETVD 464 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 465 DLLSLEV 471 >gi|297192060|ref|ZP_06909458.1| diaminopimelate decarboxylase [Streptomyces pristinaespiralis ATCC 25486] gi|197719490|gb|EDY63398.1| diaminopimelate decarboxylase [Streptomyces pristinaespiralis ATCC 25486] Length = 463 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 117/420 (27%), Positives = 195/420 (46%), Gaps = 12/420 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + + + +LA TP Y ++ AF G D V YA KA ++A Sbjct: 44 EDGVVSVGGIEVTRLAEEFGTPAYFLDEADFRARCRAWAAAF-GKDADVFYAGKAFLSRA 102 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ L G LD+ S GEL ALAA +PAERI F G K+++EI+ A+++G+ ++S Sbjct: 103 IVRWLKEEGLNLDVCSGGELATALAAGMPAERIAFHGNNKSVEEIERAVEAGVGRIVLDS 162 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAY 184 E+ + A GK+ + RV + A+TH+ I+T ++ KFGI + Sbjct: 163 FQEIVRVAHIAQRAGKRQRVQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRR 222 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A L G+++ G+ HIGSQI + F + + + L ++R + ID+GGGLGIA Sbjct: 223 ALKLDGLELIGIHSHIGSQIFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIA 282 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y S+ P + A + + +I +EPGR +V + +V ++K Sbjct: 283 YTSEDDPREPHEIAKSLTEIVTRECEAAGLRPPRISVEPGRAIVGPTAFTLYEVGTVKPL 342 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + T +V+ + + + +VG CE+GD + + Sbjct: 343 EGLRTYVSVDGGMSDNIRTALYDAEYSVALVSRTSEAAPMLSRVVGKHCESGDIVVKDAF 402 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + PGDL+ + TGAY + YN L P + V + +I R T ++L+ LD Sbjct: 403 LPADLAPGDLIAVPATGAYCRSMASNYNHALRPPVVAVADGEARVIVRRETEEDLLRLDV 462 >gi|222099950|ref|YP_002534518.1| Diaminopimelate decarboxylase [Thermotoga neapolitana DSM 4359] gi|221572340|gb|ACM23152.1| Diaminopimelate decarboxylase [Thermotoga neapolitana DSM 4359] Length = 395 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 128/397 (32%), Positives = 209/397 (52%), Gaps = 18/397 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L+K A + TP Y Y I + F G++ + +A+KAN+N ++ L G Sbjct: 12 ALKKAAEIHGTPLYVYFEETIRERARRVKEVFHGINLLPTFAVKANNNPNLLAILKEEGF 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D+V++GEL A A V IV++G GK+ +E+ L+ G+ NV+S E++ Sbjct: 72 GMDVVTKGELFAARLAGVDPFLIVWNGNGKSKEEMLHFLKEGVRTINVDSFEEMEMWESL 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + RVNP+++A TH ISTG K+ KFGIP++ + S G+ I G+ Sbjct: 132 SPEDVNFF---VRVNPEVDARTHPHISTGLKKHKFGIPLNMLDSFMKR---FKGMNIKGL 185 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +HIGSQI +++ F +A++ + + +++ + I++GGG GI Y + Sbjct: 186 HVHIGSQITKVDPFLEAYEKVVEASRRYG-----FEEINIGGGWGIDYQGEELNVQEYR- 239 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + ++ +E GR+++A G LV KVI +K+ +K FV++D MN +RP L Sbjct: 240 --EKVVPLLDGFKRVFVEIGRYIIAPAGFLVLKVILVKRGENKVFVVVDGGMNTLIRPAL 297 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 Y A+H I D AD+VGP+CE+GD IA +R + PGD L++E GAYG Sbjct: 298 YSAHHRIFVYGKEGSD---FKADVVGPLCESGDVIAYDRNLPAVEPGDFLFVENAGAYGY 354 Query: 377 VQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 + YNS E++V + +IR R ++ + Sbjct: 355 TMANNYNSTSKPAEVLVKKDGELVLIRRRENIMDIFK 391 >gi|295112265|emb|CBL29015.1| diaminopimelate decarboxylase [Synergistetes bacterium SGP1] Length = 428 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 108/425 (25%), Positives = 175/425 (41%), Gaps = 14/425 (3%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAV 67 L +LA TP Y I F T CYA KA +A+ Sbjct: 3 HLLWGGADCVELARSFGTPLYVLDEAVIRARCAEVRRDFLSRWPGTDACYASKAFVTRAM 62 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G GLD+VS GELR AL+A P ERI G K+ E+ AL+ G+ V+S Sbjct: 63 ARIVDQEGLGLDVVSLGELRTALSAGFPPERIELHGNAKSEVELRTALEVGVGRIVVDSL 122 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 EL L A +G + G+ KFG+P+ A Sbjct: 123 MELDVLADLAEEMGPAGADPAARRAGGFRQHARLHRHGRVGSKFGLPLEGDLLFEAVRRG 182 Query: 188 LPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIAY 244 + + G+ H+GSQ+ + ++ ++ + + +LR G ++ ++ GGG G Sbjct: 183 MARSGLDLLGLHFHVGSQLFEPDAHLRSLVRVLEAAAELRARLGFELRELNFGGGYGARS 242 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 + + + + +E GR++V++ GI + +V +K+ Sbjct: 243 NPSESHVPIALFTDAMMGALERECATRGLKRPVASIEAGRWIVSEAGITLYRVEVVKELP 302 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG--DRLHIHADIVGPICETGDFIALNR 355 T+V +D M D R LY A +E P DR +VG CE+GD + + Sbjct: 303 GLTYVAVDGGMADNPRRPLYGAVYEAVSAERPDAVADRSGSRVSVVGRCCESGDVLIEDA 362 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ R G++L + TGAY + YN ++V + +I R T ++L+ D Sbjct: 363 RLPALRRGEVLAVFNTGAYTFSMASNYNRLCRPAVVLVRDGRADLIVRRETPEDLLAGDE 422 Query: 416 IPAWL 420 IP L Sbjct: 423 IPDRL 427 >gi|183984075|ref|YP_001852366.1| diaminopimelate decarboxylase LysA [Mycobacterium marinum M] gi|183177401|gb|ACC42511.1| diaminopimelate decarboxylase LysA [Mycobacterium marinum M] Length = 472 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 112/429 (26%), Positives = 195/429 (45%), Gaps = 22/429 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G V L +LA TP + + AF G V YA KA Sbjct: 45 EQGCARIAGVPLTELAREYGTPLFVIDEDDFRSRCQEIAAAFGG-GHNVNYAAKAFLCSE 103 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G +D+ + GEL AL A P ERI G K++ E+ A+++G+ ++S Sbjct: 104 IARWVNEEGLSIDVSTGGELAVALHANFPPERITLHGNNKSVAELTTAVKAGVGHIVLDS 163 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAY 184 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ I ++ Sbjct: 164 MIEIERLDAIAGEAGIVQDVFVRLTVGVEAHTHEFISTAHEDQKFGLSISSGAAMAAVRR 223 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH-----IDVGGG 239 +++ G+ HIGSQI ++ F A + L +++ + + + +D+GGG Sbjct: 224 VFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLREVVAEFGSEKTAQLATVDLGGG 283 Query: 240 LGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKV-- 290 LGI+Y S PP + A G ++++EPGR + I + +V Sbjct: 284 LGISYLSSDDPPPVGELADKLGAIVSNESAAVGLPAPRLVVEPGRAIAGPGTITLYEVGT 343 Query: 291 ---ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 + + +A++ +V +D M+D +R LYDA +++ + D A +VG CE+ Sbjct: 344 VKDVDVSATANRRYVSVDGGMSDNIRTALYDAQYDVRLVSR-VSDAPATLARVVGKHCES 402 Query: 348 GDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 GD I + + +PGDL+ + TGAY S YN + V + ++ R T Sbjct: 403 GDIIVRDTWVPDDLQPGDLVAVAATGAYCYSLSSRYNMIGRPAVVAVRAGKARLVLRRET 462 Query: 407 FQELIELDS 415 +L+ L+ Sbjct: 463 VDDLLSLEV 471 >gi|257790053|ref|YP_003180659.1| diaminopimelate decarboxylase [Eggerthella lenta DSM 2243] gi|317489497|ref|ZP_07948007.1| diaminopimelate decarboxylase [Eggerthella sp. 1_3_56FAA] gi|325830440|ref|ZP_08163897.1| diaminopimelate decarboxylase [Eggerthella sp. HGA1] gi|257473950|gb|ACV54270.1| diaminopimelate decarboxylase [Eggerthella lenta DSM 2243] gi|316911426|gb|EFV33025.1| diaminopimelate decarboxylase [Eggerthella sp. 1_3_56FAA] gi|325487907|gb|EGC90345.1| diaminopimelate decarboxylase [Eggerthella sp. HGA1] Length = 451 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 128/424 (30%), Positives = 204/424 (48%), Gaps = 14/424 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKAN 62 + + L+ V + +LA T Y + T+ AF ++ V YA KA Sbjct: 29 EVKDDHLYVGGVDMVELAREQGTALYVMDEADMRTRMETYLAAFRSRYQNSDVVYASKAF 88 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 N+ + +A G LD+ GEL ALAA P ERI G KT E+ A+Q+G+ Sbjct: 89 LNKEAARIVADEGLCLDVSGGGELAIALAAGFPTERIFMHGNNKTPRELREAIQAGVGRI 148 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHS 180 ++S ELK +++ A LG PI R+ P + A+TH+ I TG ++ KFG + + Sbjct: 149 IIDSRIELKRISEIAGELGVVQPIYMRITPGVEADTHQYIRTGCEDSKFGFTMRDDFAYG 208 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGG 239 P V+++G+ HIGSQI + S+ +A +++ +L ++ G+ I+ +DVGGG Sbjct: 209 CVKDVLAAPNVRLAGLHCHIGSQIFALHSYPEAVEVMVELMARIEEGYGYRIEELDVGGG 268 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVIS 292 LGIAY +D +P S ++A + K + EPGR LVA G+ + V Sbjct: 269 LGIAYTADDKPASIDEFAETVTSAVHAACEKFGVPEPRLLTEPGRSLVATAGVTLYTVGI 328 Query: 293 IKKSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 +K + +D M+D +R LY A +E N AG I G CE+GD + Sbjct: 329 LKTLPGIRKYVAVDGGMSDNIRTALYHADYEPVI-ANKAGQPRTEIVTIAGKHCESGDAV 387 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 ++ + P GD++ + TGAY + YN + + V Q + R T+++L+ Sbjct: 388 VIDMPMQHPDLGDIVAVFGTGAYCYTMASNYNGQPRPAIVFVKDGQARVTTRRETYEDLM 447 Query: 412 ELDS 415 D Sbjct: 448 SRDI 451 >gi|257877302|ref|ZP_05656955.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC20] gi|257811468|gb|EEV40288.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC20] Length = 438 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 116/431 (26%), Positives = 192/431 (44%), Gaps = 14/431 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKAN 62 + L+ + +LA TP Y YS + I + F T YA KA Sbjct: 4 EIKNNHLYIDGCDTVELAKTFGTPLYVYSVSEIREECQKIQAQFLTRYSKTRAAYAAKAF 63 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 A+++ + G LD+VS GEL A+ A PAE I F+G K+I+E+ AL G+ Sbjct: 64 CTTAMLQVIKSEGLSLDVVSGGELYTAIQADFPAEHIEFNGNNKSIEELAAALDYGVGRI 123 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V+ E+ + A I R+ P+++ +TH+ ISTG+K+ KFGIP+ + Sbjct: 124 IVDGIQEVGLIRALCQEKQVVAKILLRITPEVSVSTHQFISTGQKDSKFGIPLDEEILFP 183 Query: 183 --AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGG 239 P + G+ H+GSQ+ S A L Q + I+ ++VGGG Sbjct: 184 LVEEVIQAPELDFYGLHFHVGSQLSDNRSHLAAVDAALALVQTIHERFDYWIKELNVGGG 243 Query: 240 LGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 G+ Y S + + + + I++EPGR +VA+ GI + + S Sbjct: 244 FGVRYTDADIRQPYSYFLDPVMEKIDAFYAQHQSERPTIVIEPGRSIVAEAGISLHTIGS 303 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK +D M D +RP LY A + N A + I G CE+ D + Sbjct: 304 IKTLPGIRTYASIDGGMTDNIRPGLYQATYTGIL-ANRASEAATQKITISGKACESTDIL 362 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + GDL TGAYG + +YN+ + + V Q + R ++++++ Sbjct: 363 VKDLALPPVETGDLFATFATGAYGYSMASSYNNLQIPAVVFVENGQAELAVKRQSYEQML 422 Query: 412 ELDSIPAWLQK 422 + + +P++L++ Sbjct: 423 QNEVVPSFLRE 433 >gi|331695513|ref|YP_004331752.1| diaminopimelate decarboxylase [Pseudonocardia dioxanivorans CB1190] gi|326950202|gb|AEA23899.1| diaminopimelate decarboxylase [Pseudonocardia dioxanivorans CB1190] Length = 499 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 115/439 (26%), Positives = 191/439 (43%), Gaps = 30/439 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + +V + LA TP + F+ +F V YA KA + + Sbjct: 48 DGVVRIADVDVRDLAQTYGTPLFVVDEADFRSRAAEFAASFGAE--AVHYAAKAFLSTEI 105 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G +D+ S GEL AL A PAERI G K+ E+D A+ +G+ V+S Sbjct: 106 ARWVADEGLSMDVASGGELAVALRAGFPAERIAVHGNNKSATELDEAVAAGVGRIVVDSF 165 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY----- 182 E+ L+ A + P+ RV + A+TH+ I+T ++ KFG I + Sbjct: 166 HEIARLDAVARARDVVVPVMIRVTVGVEAHTHEFIATAHEDQKFGFSISGGDTSPAAEAA 225 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-----HNIQHIDVG 237 G+++ G+ HIGSQI E F A + +L + ++ +D+G Sbjct: 226 RRVLAARGLRLVGLHSHIGSQIFDTEGFEVAAHRVVRFLARLHAEHGADALEDLTTLDLG 285 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKV 290 GG GIAY ++ P ++ A+ + I +EPGR + + + +V Sbjct: 286 GGFGIAYRAEESPLDVAELAAQLRDIVKRECHAEDLDVPAIAVEPGRAIAGPGTVTLYEV 345 Query: 291 ISIKK----SADKTFVILDVAMNDFMRPTLYDAYHEINYIVN------PAGDRLHIHADI 340 ++K S + +V +D M+D +R LYDA ++ + P G + + Sbjct: 346 GTLKDVPLGSGARRYVSVDGGMSDNIRTALYDAVYDCRLVSRSSAADSPDGSADAALSRV 405 Query: 341 VGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 VG CE+GD + + + PGDLL + TGAY + +YN + V + Sbjct: 406 VGKHCESGDIVVRDCWLPADLGPGDLLAVAATGAYCYSMASSYNRLPRPAVVAVRDGRAR 465 Query: 400 IIRPRMTFQELIELDSIPA 418 +I R T + L+ P Sbjct: 466 LILRRETVDDQFRLEVDPG 484 >gi|256380150|ref|YP_003103810.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827] gi|255924453|gb|ACU39964.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827] Length = 474 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 118/429 (27%), Positives = 194/429 (45%), Gaps = 22/429 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V + LA TP + + AF G ++V YA KA + AV Sbjct: 47 DGVVTLGGVDVRALAEEHGTPLFVMDEADFRSRCAEHAAAF-GDPSLVHYASKAFLSVAV 105 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G +D+ S GEL AL A P ERI G K++ E+ A+ +G+ ++S Sbjct: 106 ARWVAEEGLSIDVCSGGELAIALRAEFPPERIALHGNNKSVAELAAAVDAGVGVVVLDSF 165 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AYA 185 E+ L+Q A G+ + RV + A+TH+ I+T ++ KFG + + Sbjct: 166 QEIARLDQVARERGRVQQVMIRVTVGVEAHTHEFIATAHEDQKFGFSLSSGDAAEAARRV 225 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-----HNIQHIDVGGGL 240 G+ + G+ HIGSQI F A + + L +LR + +D+GGGL Sbjct: 226 VKAEGLSLVGLHSHIGSQIFDASGFEVAARRVVSLLAELRVEHGPALLDELTTLDLGGGL 285 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISI 293 GIAY +D PP + A+ + K+ +EPGR +V + + +V +I Sbjct: 286 GIAYTADDDPPPPAVLAAQLRDIVAQECGRAGLPVPKLAVEPGRAIVGPGTVTLYEVGTI 345 Query: 294 KKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH-IHADIVGPICET 347 K + +V +D M+D +R LYDA ++ + A + + +VG CE Sbjct: 346 KDVQLDAGATRRYVSVDGGMSDNIRTALYDAVYDCRLVSRAAEEGSEAVLCRVVGKHCEA 405 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 GD + + + PGDL+ + TGAY + YN V+G + ++ R T Sbjct: 406 GDVVVRDCWLPADLAPGDLVAVAATGAYCYSMASGYNRLPRPALAAVDGGRSRLLLRRET 465 Query: 407 FQELIELDS 415 ++L L+ Sbjct: 466 EEDLFRLEV 474 >gi|210622918|ref|ZP_03293441.1| hypothetical protein CLOHIR_01389 [Clostridium hiranonis DSM 13275] gi|210154023|gb|EEA85029.1| hypothetical protein CLOHIR_01389 [Clostridium hiranonis DSM 13275] Length = 430 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 118/425 (27%), Positives = 193/425 (45%), Gaps = 14/425 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALK 60 + + L+ V+ + +TP Y + I N + F V YA K Sbjct: 6 SMEIKNDELYIGGVNCLDMVKEYKTPLYVFDEQLIRDNCREYRKYFKAEENGNRVAYAGK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A + + + LD+VS GEL A + P E I F G KT +E+++ ++ G+ Sbjct: 66 AFLPGYMCRLIKEEKMCLDVVSGGELYTAHKSGFPMENIFFHGNNKTREEVEMGVEYGVG 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F V++ EL L + K I FR+ P I A+TH+ I TG+ + KFG + Sbjct: 126 KFVVDNFYELDLLEEICEREDKVQEIYFRITPGIEAHTHEYIKTGQIDSKFGFALVNGDL 185 Query: 181 LYAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVG 237 A VK+ G+ HIGSQI ++E F ++ L ++++ N + +D+G Sbjct: 186 YNAIEKLKEYKRVKLVGLHAHIGSQIFELEPFLDEVDVMMKLVKEIKENYGIELTDVDLG 245 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKV 290 GG+G+ Y + +P + D+ I +++EPGR ++A+ G + + Sbjct: 246 GGVGVYYTEEDKPRAIKDFCEAIIDRAEKTCAELGMEVPHLVIEPGRSVIANAGSTLYTI 305 Query: 291 ISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 SIK D +D M D +RP+LY A +E + + GD + I G CE+GD Sbjct: 306 GSIKDIKDVRVYVSVDGGMTDNIRPSLYHAGYECSIVNKMNGDTEN-RVTIAGKCCESGD 364 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + N I+ GD+L TGAYG + YN I V + + R TF++ Sbjct: 365 ILINNVAISEIESGDILITTSTGAYGYSMASNYNKIQKPAVIAVKNGEITPVCRRQTFED 424 Query: 410 LIELD 414 ++ L+ Sbjct: 425 VLALE 429 >gi|159795662|pdb|2YXX|A Chain A, Crystal Structure Analysis Of Diaminopimelate Decarboxylate (Lysa) Length = 386 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 130/396 (32%), Positives = 208/396 (52%), Gaps = 18/396 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L K+A + TP Y Y + K F+G++ + +A+KAN+N ++K L G G Sbjct: 4 LRKVAEIHGTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLKILREEGFG 63 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+V++GEL A A VP+ +V++G GK+ D+ + L+ + NV+S E + + Sbjct: 64 XDVVTKGELLAAKLAGVPSHTVVWNGNGKSRDQXEHFLREDVRIVNVDSFEEXEIWRELN 123 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP+++A TH ISTG K+ KFGIP+ + S I G+ Sbjct: 124 PEGVEYF---IRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFXER---FRSXNIRGLH 177 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +HIGSQI ++E F +AF + +++ + I++GGG GI Y + SS Sbjct: 178 VHIGSQITRVEPFVEAFSKVVRASERYG-----FEEINIGGGWGINYSGEELDLSSYR-- 230 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 ++I+E GR++VA G L+ +V+ +K+ +K FV++D N +RP LY Sbjct: 231 -EKVVPDLKRFKRVIVEIGRYIVAPSGYLLLRVVLVKRRHNKAFVVVDGGXNVLIRPALY 289 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 AYH I + AD+VGP+CE+GD IA +R++ PGD++ +E GAYG Sbjct: 290 SAYHRIFVLGKQ---GKEXRADVVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYT 346 Query: 378 QSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 S YNS E++V + +IR R T ++ + Sbjct: 347 XSNNYNSTTRPAEVLVRENGRISLIRRRETEXDIFK 382 >gi|33863330|ref|NP_894890.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9313] gi|33640779|emb|CAE21234.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9313] Length = 455 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 108/420 (25%), Positives = 179/420 (42%), Gaps = 11/420 (2%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQA 66 L L +LA TP Y + ++ A ++ YA KANS+ Sbjct: 32 RLIVGGCQLSELAECYGTPLYVLDEATLRAACQSYRGALQRHYPGPSLPIYASKANSSLM 91 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + +A G GLD+VS GEL AL VP + IV G K+ E+ LA ++G+ ++ Sbjct: 92 MSSLVASEGFGLDVVSAGELLTALKGGVPGDCIVLHGNNKSDQELLLAYRNGVT-IVADN 150 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 + +L L+Q A + R P I +TH+ I TG + KFG Q+ S+ Sbjct: 151 QHDLDRLSQLVPVGADPAKLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLESVLNQLL 210 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 +++G+ HIGSQI ++E ++ Q R GH + ++VGGGLG+ Y S Sbjct: 211 GCRWARLTGLHAHIGSQIFELEPHQDLADVMAGALQLARRLGHPVMDLNVGGGLGVRYVS 270 Query: 247 DHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADK 299 PPS ++ ++ + +++ EPGR LVA G+ + +V S K Sbjct: 271 SDDPPSIDNWVKVVAEAVNQACRSRNLDLPRLMCEPGRSLVAAAGVTLYRVGSRKTIPGL 330 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + + + + +VG CE+GD + + + Sbjct: 331 RTYLSVDGGMSDNPRPITYQSLYTACLADRPLASPDETITLVGKHCESGDVLLKDLALPY 390 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GD+L + TGAY S YN ++V+ +++ R ++L+ D +P Sbjct: 391 ASSGDVLVVFATGAYNVSMSSNYNRIPRPAAVLVHSGHSELVQRREQPEDLLRYDVMPER 450 >gi|194477239|ref|YP_002049418.1| diaminopimelate decarboxylase [Paulinella chromatophora] gi|171192246|gb|ACB43208.1| diaminopimelate decarboxylase [Paulinella chromatophora] Length = 453 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 119/424 (28%), Positives = 187/424 (44%), Gaps = 11/424 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT---MVCYALKANS 63 +G L L LA TP Y + + NA + + YA KANS Sbjct: 27 EQGRLEIGGCRLSHLAKRYGTPLYILDEITLRATCKAYFNALKKFYSALSLPLYASKANS 86 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ + +A G G+D+VS GEL ALA +PA RI+ G K+ E+ LAL G Sbjct: 87 SKLLTALVAEEGFGIDVVSGGELLTALAGKMPASRILLHGNNKSWQELALALDHGATIVV 146 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 S +L+ +++ + + R P+I +TH+ I TGK + KFG QI S++ Sbjct: 147 DNSH-DLQIISELVGNRKLPVSLMLRFTPNIECHTHEYIRTGKLDSKFGFGPEQIESIFK 205 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +I+G+ HIGSQI ++E ++ D Q RS GH I ++VGGGLGI Sbjct: 206 KLLACSWARITGLHAHIGSQIFELEPHRDLVGIMADAIQLGRSMGHPIVDLNVGGGLGIC 265 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y S PPS ++ I + ++I EPGR +VA G+ + + S K Sbjct: 266 YVSSDDPPSIQNWVKNIAKAVTVSCERRKLSLPRLICEPGRSVVATAGVTLYTLGSQKHI 325 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + + ++ + ++ +VG CE+GD + N Sbjct: 326 PGMPSYLSIDGGMSDNPRPITYQSIYTAFLADYPTQKVIQEVILVGKHCESGDVLLKNLY 385 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + + GD+L + TGAY S YN ++V +I+ R ++L+ D + Sbjct: 386 LPKSKSGDILVVFATGAYNISMSSNYNRVPRPASVIVFNGHADLIQLREQPEDLLFYDIV 445 Query: 417 PAWL 420 P L Sbjct: 446 PPRL 449 >gi|332290670|ref|YP_004429279.1| diaminopimelate decarboxylase [Krokinobacter diaphorus 4H-3-7-5] gi|332168756|gb|AEE18011.1| diaminopimelate decarboxylase [Krokinobacter diaphorus 4H-3-7-5] Length = 401 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 118/403 (29%), Positives = 184/403 (45%), Gaps = 12/403 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLG 75 L + + +P Y Y I Y +NAF + + YA+KA SN ++++ L LG Sbjct: 5 DLLNVVNTHGSPVYVYDAETITAQYNRLTNAFKDVKQLRLNYAVKALSNISILQHLKSLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SGLD VS E++ L A +RI+F+ G ++ EI+ Q G+ + + Sbjct: 65 SGLDTVSIQEVQLGLLAGFTPDRIIFTPNGVSLAEIEEVAQMGVQINIDNLS-----ILE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + + P+ RVNP + A + IS G + KFGI IHQ+ + I+G Sbjct: 120 QFGTKHPQIPVCIRVNPHVMAGGNTNISVGHIDSKFGISIHQLPHVLRIVENTGM-NING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I+ F A ++L D Q+ + Sbjct: 179 IHMHTGSDILDIDVFVYATEILFDAAQKFSDLTFIDFGSGFKVPYKEGDIETNIEELGEK 238 Query: 256 YASLIHQYFGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + + + EPG+FLV++ G + +V +K++ F +D N +R Sbjct: 239 LGKRFNAFAKSYGKPLTLTFEPGKFLVSEAGKFLVQVNVVKQTTSTVFAQVDSGFNHLIR 298 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P LY + HEI I NP G +VG ICET D A NR+I+ GD+L + GA Sbjct: 299 PMLYGSQHEIRNISNPKGRERF--YSVVGYICET-DTFANNRRISEISEGDILAFDNAGA 355 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 Y + YNSR E+++ + H+IR R TF++LI I Sbjct: 356 YCFTMASNYNSRYRPAEVLIKNGEAHLIRKRETFEDLISNQVI 398 >gi|145222885|ref|YP_001133563.1| diaminopimelate decarboxylase [Mycobacterium gilvum PYR-GCK] gi|145215371|gb|ABP44775.1| diaminopimelate decarboxylase [Mycobacterium gilvum PYR-GCK] Length = 472 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 113/428 (26%), Positives = 198/428 (46%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G++ V + +A TP + S+AF G + V YA KA + Sbjct: 46 DGAVSIAGVPVADIAAEFGTPVFVIDEADFRSRCRDISSAFGGGEY-VHYAAKAFLCGEI 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LD+ + GEL AL A PAERI G K++ E+ A++ G+ V+S Sbjct: 105 ARWVDEEGLSLDVATGGELAVALHAGFPAERITVHGNNKSVAELTAAVKHGVGHVVVDSM 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AYA 185 E++ L++ A G + RV + A+TH+ IST ++ KFG+ + ++ Sbjct: 165 IEIERLDRIAADNGVVQDVLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMEAVRRV 224 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGL 240 +++ G+ HIGSQI + F A + + + + +D+GGGL Sbjct: 225 FEAGNLRLVGLHSHIGSQIFDVAGFEIAAHRVIGLLRDVVAEFGVEKTSQMDIVDLGGGL 284 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKV--- 290 GI+Y D PP S+ A+ + K+++EPGR + I + +V Sbjct: 285 GISYLPDDNPPPMSELAAKLRAIVARESAAVGLPAPKLVVEPGRAIAGPGTITLYEVGTV 344 Query: 291 --ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 +++ ++ + +V +D M+D +R +LY A +++ + D + +VG CE+G Sbjct: 345 KDVAVSPTSHRRYVSVDGGMSDNIRTSLYGAEYDVRLLSR-VSDATPTLSRVVGKHCESG 403 Query: 349 DFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + ++ RPGDLL + TGAY S YN + V + +I R T Sbjct: 404 DIVVRDAWLSEDVRPGDLLGVAATGAYCYSMSSRYNLIGRPAVVAVRDGRARLILRRETV 463 Query: 408 QELIELDS 415 ++L+ L+ Sbjct: 464 EDLLSLEV 471 >gi|317485778|ref|ZP_07944644.1| diaminopimelate decarboxylase [Bilophila wadsworthia 3_1_6] gi|316922972|gb|EFV44192.1| diaminopimelate decarboxylase [Bilophila wadsworthia 3_1_6] Length = 424 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 111/417 (26%), Positives = 183/417 (43%), Gaps = 17/417 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + N + ++LA TP Y Y+ + + + V Y+ KAN+N A+ Sbjct: 10 DKVRFFGNTTPQELAAQYGTPLYVYNEDVLRRRCRELLSLSSLPGFHVNYSAKANTNLAL 69 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G D +S GEL A +R+++ + +E+ A +G+ Sbjct: 70 LRIVREEGCHADAMSPGELHINKLAGFTPDRLLYVCNNVSAEEMKNAADNGLIVSVDSLS 129 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + R+NP I A HKK+ T KE KFGI + + A Sbjct: 130 -----QLDQYGKVNPGGKVMIRINPGIGAGHHKKVITAGKETKFGIDPTSLDEVRALLKK 184 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGIAYHS 246 ++GV+ HIGS + +++ A + L Q L I+ ID GGGLGI Y Sbjct: 185 HSLT-LAGVNQHIGSLFMEPDNYLNAIEFLLHFVQSDLADLLPGIEIIDFGGGLGIPYRK 243 Query: 247 DHRPPSSSDYASLIHQYFGNLQC--------KIILEPGRFLVADVGILVTKVISIKKSAD 298 P + K +EPGR++VA+ G+L+ V + K + + Sbjct: 244 YEEEPRLDMAELGRRLHALLSAWVEETGYKGKFFIEPGRYVVAECGVLLGTVHATKFNGE 303 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNP-AGDRLHIHADIVGPICETGDFIALNRKI 357 +V D+ N +RP +YD++H+I + D + IVG ICE+GD +A R + Sbjct: 304 NRYVGTDLGFNVLVRPAMYDSFHDIEIFRDGGEPDTDLVEQSIVGNICESGDILAKKRML 363 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 L + GD++ GAYG V S +YN R E+++ + +IR R T +L Sbjct: 364 PLIKEGDIVAALDAGAYGFVMSSSYNQRPRAAEVLITSDGTPKLIRRRETLDDLTRC 420 >gi|332521816|ref|ZP_08398267.1| diaminopimelate decarboxylase [Lacinutrix algicola 5H-3-7-4] gi|332042646|gb|EGI78847.1| diaminopimelate decarboxylase [Lacinutrix algicola 5H-3-7-4] Length = 408 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 117/401 (29%), Positives = 190/401 (47%), Gaps = 12/401 (2%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L ++A ++P Y Y + I Y ++AF+ + + + YA+KA SN +++K + LG+ Sbjct: 6 LLQIAKDFESPVYVYDSQTITNQYKRLTSAFNKVKNVKINYAVKALSNISILKLMRSLGA 65 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GLD VS E++ LAA AE I+F+ G ++ EI+ + G + ++ Sbjct: 66 GLDTVSIQEVQLGLAAGFKAEDIIFTPNGVSLLEIETVAKLGCQINIDNLS-----ILEQ 120 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + K P+ R+NP + A + IS G + KFGI IHQI + I+G+ Sbjct: 121 FGTKHPKIPVCIRINPHVMAGGNTNISVGHIDSKFGISIHQIPHILRIVENTNMT-INGI 179 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MH GS I I+ F A ++L + + ++ + Sbjct: 180 HMHTGSDILDIDVFLYASEILFETAKNFKNLEFIDFGSGFKVPYKTGDIETNIEEFGDKL 239 Query: 257 ASLIHQYFGNLQC--KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 ++ + + N + EPG+FLV++ G + KV +K++ F +D N +RP Sbjct: 240 SARFNTFCKNYGKALTLAFEPGKFLVSEAGQFLAKVNVVKQTTSTVFAQVDSGFNHLIRP 299 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 LY + HEI I NP G +VG ICET D A NR+IA R D+L + GAY Sbjct: 300 MLYGSQHEIENISNPNGRERF--YSVVGYICET-DTFANNRRIAEIRENDILAFKNAGAY 356 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + YNSR E++ + + H+IR R TF +++ Sbjct: 357 CYSMASNYNSRYRPAEVLWHNGEAHLIRKRETFDDILRNQI 397 >gi|317010571|gb|ADU84318.1| diaminopimelate decarboxylase [Helicobacter pylori SouthAfrica7] Length = 405 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 162/396 (40%), Positives = 238/396 (60%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L++ AF G +++CYALKANSN +++ LA L SG Sbjct: 5 EELFQTYKTPFYLYDFDKIKQAFLSYKEAFKGRKSLICYALKANSNLSILSLLASLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE++RAL A + RIVFSGVGK+ EI+ AL+ I NVES ELKT+ + A Sbjct: 65 DCVSLGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISVRINPNIDAKTHPYISTGLKENKFGVEEKEALEMFLWAKKSAFLEPISVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G+ Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVGY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 GILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYH 303 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A H I I D++ D+VGP+CE+ D + +PGD L IEK GAYG+ Sbjct: 304 AKHAIRVITPSKSDKIS-PCDVVGPVCESSDTFLKEVNLPELKPGDKLAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR + + ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKKESLEDLWRLE 398 >gi|242084786|ref|XP_002442818.1| hypothetical protein SORBIDRAFT_08g003330 [Sorghum bicolor] gi|241943511|gb|EES16656.1| hypothetical protein SORBIDRAFT_08g003330 [Sorghum bicolor] Length = 489 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 141/416 (33%), Positives = 234/416 (56%), Gaps = 6/416 (1%) Query: 8 EGSLHAENVSLEK-LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L+ E V +E +A ++PFY YS I +N+ + +A G+ ++V YA+KAN+N Sbjct: 75 DGYLYCEGVRVEDAMAAAERSPFYLYSKPQILRNFAAYRDALQGLRSIVGYAVKANNNLP 134 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ L LG G +VS ELR AL A R +F+G GKT +++ LA +SG++ NV+S Sbjct: 135 VLRVLRELGCGAVLVSGNELRLALQAGFDPARCIFNGNGKTFEDLKLAAESGVF-VNVDS 193 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E +L+ + + A + GKK P+ R+NPD++ H ++TG K KFGI ++ Sbjct: 194 EFDLENIVRAARATGKKVPVLLRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIK 253 Query: 187 TLPG-VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-AY 244 + P +K+ GV H+GS I +++ F A L+ + ++R+ G ++++++GGGLGI + Sbjct: 254 SYPDEIKLVGVHCHLGSTITKVDIFRDAAVLMVNYVDEIRAQGFKLEYLNIGGGLGIDYH 313 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 H+D P+ D + + + + +I+EPGR L+A+ V +V +K + K F+++ Sbjct: 314 HTDAVLPTPMDLINTVRELVLSQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVV 373 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D +M + +RP+LY AY I + P DIVGP+CE+ DF+ +R++ P G Sbjct: 374 DGSMAELIRPSLYGAYQHIELVSPPTPGAEVATFDIVGPVCESADFLGKDRELPKPDEGA 433 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE-LDSIPA 418 L + GAY + TYN +L PE V IR F + ++ D +PA Sbjct: 434 GLVVHDAGAYCMSMASTYNLKLRPPEYWVEEDGSIVKIRHEEKFDDYMKFFDGLPA 489 >gi|308373102|ref|ZP_07431007.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu005] gi|308338874|gb|EFP27725.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis SUMu005] Length = 425 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 113/424 (26%), Positives = 191/424 (45%), Gaps = 22/424 (5%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 + L +LA TP + + AF G V YA KA V + + Sbjct: 3 CIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWI 61 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 + G LD+ + GEL AL A P ERI G K++ E+ A+++G+ V+S +E++ Sbjct: 62 SEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIE 121 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYASTLP 189 L+ A G + R+ + A+TH+ IST ++ KFG+ + ++ Sbjct: 122 RLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATD 181 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGLGIAY 244 +++ G+ HIGSQI ++ F A + + + I +D+GGGLGI+Y Sbjct: 182 HLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISY 241 Query: 245 HSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-----IS 292 PP ++ A S G K+++EPGR + I + +V + Sbjct: 242 LPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVD 301 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + +A + +V +D M+D +R LY A +++ + D + A +VG CE+GD I Sbjct: 302 VSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSR-VSDAPPVPARLVGKHCESGDIIV 360 Query: 353 LNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + RPGDL+ + TGAY S YN + V+ ++ R T +L+ Sbjct: 361 RDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLL 420 Query: 412 ELDS 415 L+ Sbjct: 421 SLEV 424 >gi|312129772|ref|YP_003997112.1| diaminopimelate decarboxylase [Leadbetterella byssophila DSM 17132] gi|311906318|gb|ADQ16759.1| diaminopimelate decarboxylase [Leadbetterella byssophila DSM 17132] Length = 419 Score = 245 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 119/412 (28%), Positives = 197/412 (47%), Gaps = 17/412 (4%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 EN +L +LA TP Y Y I AF ++ + YA KAN+N +V+ Sbjct: 16 FQMENTTLLELAENYGTPLYVYDGDVIAAKVERLRAAFKEVNMKIKYACKANTNISVLAL 75 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + LG +D+VS E++ AL+A E+I F+ G DEI+ + G+ L Sbjct: 76 MKKLGVDIDVVSPQEMKLALSAGFSPEQITFTSSGVGFDEIEACVNEGVLVNIDN----L 131 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 TL + G P+ R+ P++ ++KISTG KFGIPI Q + + Sbjct: 132 STLEKFGQKYGSSLPVFIRIRPNVAGGGNEKISTGHGNSKFGIPIEQKGEILKLVNKY-Q 190 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++I G+ H GS I +F +A +++ +L + N+Q++D GGG + Y Sbjct: 191 LRIVGLHQHTGSDIKDGSTFVQAAEVMF----ELAKDFDNLQYLDFGGGFKVPYKEGDVE 246 Query: 251 PSSSDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 D + F EPG++LV++ G+L+ V +K + + T + L Sbjct: 247 TDMEDLGVQLSARFKAFCASYGRELELWFEPGKYLVSESGLLLASVNVVKNNPNGTLLGL 306 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 + +N +RP +YDAY Y ++ A + +IVG +CET D IA +R + GD Sbjct: 307 NTGLNHLIRPMMYDAY-HGVYNISKAKEEASKRYNIVGYMCETDD-IAKDRTLPETEEGD 364 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 ++ I GAYG + YNSR E++ + H++R R T +++++ + Sbjct: 365 IMAIRNAGAYGFTMASNYNSRFRPAEVLYYQGKSHLVRKRETMEDILKNQIL 416 >gi|332879997|ref|ZP_08447681.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681993|gb|EGJ54906.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 401 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 124/406 (30%), Positives = 188/406 (46%), Gaps = 20/406 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT-MVCYALKANSNQAVIKTLAHLG 75 L +AH +P Y Y I Y + AF + + YA+KA SN +V+K + LG Sbjct: 5 DLLSIAHTYGSPVYVYDADKISSQYQRLTAAFSSVPHLRINYAMKALSNISVLKLMKKLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD VS E++ L A ++I+F+ G +IDEI+ A++ G+ + + Sbjct: 65 AGLDTVSIQEVQLGLRAGFAPQQIIFTPNGVSIDEIEEAMRLGVQLNIDNLS-----VLE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + S + P+ R+NP + A + IS G + KFGI IHQI + I+G Sbjct: 120 QFGSKHPEVPVCIRINPHVMAGGNSNISVGHIDSKFGISIHQIPHILRIVENTKM-HING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + +H GS I I+ F A ++L ++ N N+Q ID G G + Y + + Sbjct: 179 IHIHTGSDILDIDVFLYAAEILF----EMAKNFKNLQFIDFGSGFKVPYKEGDIQTNIEE 234 Query: 256 YASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + F + EPG+FLV+ G + KV +K++ F +D N Sbjct: 235 LGERLSARFLAFCQEYGRDLTLAFEPGKFLVSQAGYFLVKVNVVKQTTSTVFAGVDSGFN 294 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 +RP Y A H I I N + +VG +CET D A NR+IA GD+L Sbjct: 295 HLIRPMFYGATHFIENISN--PEGRKRFYSVVGYVCET-DTFASNRQIAEITEGDILCFH 351 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY S YNSRL E++ + H+IR TF +L+ Sbjct: 352 NAGAYCYTMSSNYNSRLRPAEVLWYKGEAHLIRRAETFDDLVRGQI 397 >gi|330813484|ref|YP_004357723.1| diaminopimelate decarboxylase [Candidatus Pelagibacter sp. IMCC9063] gi|327486579|gb|AEA80984.1| diaminopimelate decarboxylase [Candidatus Pelagibacter sp. IMCC9063] Length = 411 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 168/412 (40%), Positives = 243/412 (58%), Gaps = 1/412 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ KY L+ ENVS++K+A TPFY YS +E N+ F +F ++ ++C+A+K Sbjct: 1 MNLIKYRGNDLYFENVSVKKIAKKNITPFYLYSFEQLEYNFNFFHKSFKSINPLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +N+N +K L LGSG D+VS GEL+ AL A + A++IVFSGVGKT +E+ A+ I Sbjct: 61 SNTNLFFLKKLKKLGSGADVVSIGELQLALKAGINAQKIVFSGVGKTKEELSYAVSKKIL 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 N ESE+E+ + + A S K I R+NP+I+A T+KKISTGKK DKFGI + + Sbjct: 121 LINTESENEINEIIKIARSKKKIVTIGIRLNPNISAKTNKKISTGKKSDKFGISLDRCFK 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + S +KI G+ +HIGSQI ++ F K ++ +L++ G I ++D+GGG+ Sbjct: 181 ILKKNSNNKNIKIEGLSVHIGSQIKELAPFKKTLDVINKFLLKLKNEGITISYLDLGGGM 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y + YA+L+H + N +CKII EPGR++ A+ +LV+KV +K+ D+ Sbjct: 241 GIPYSALETEFDLKKYANLVHAFNKNHKCKIIFEPGRYMSANTALLVSKVTYVKEIQDRN 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FVILD AMND MRP LY A H+I I + + + VGPICE+ D Sbjct: 301 FVILDAAMNDLMRPALYGAKHDILPIQK-DKKKFNRKIEFVGPICESTDKFITYNNYPRL 359 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 + G + GAYG S YN R L EI +N + IIRPR ++LI+ Sbjct: 360 KEGGYVCFTNVGAYGRSLSSNYNVRPLAAEIAINKKSYTIIRPRQKLKDLIK 411 >gi|33240555|ref|NP_875497.1| diaminopimelate decarboxylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238083|gb|AAQ00150.1| Diaminopimelate decarboxylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 455 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 108/420 (25%), Positives = 183/420 (43%), Gaps = 11/420 (2%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQA 66 L L LA TP Y + + + +A D++ YA KANS+ Sbjct: 32 RLSIGGCLLSSLAEKYGTPLYILDELTLRTSCREYKDALSKYYPGDSIPLYASKANSSLI 91 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + +A G G+D+VSEGEL AL V + IVF G K+ E+ +A + +++ Sbjct: 92 ISNIVASEGMGVDVVSEGELITALKGGVESSNIVFHGNNKSKSELIMAYK-NDVIIVLDN 150 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 + ++ L + +KA + R P I +TH+ I TG + KFG ++ S++ Sbjct: 151 QYDIDQLREIVPFGKRKAKLMLRFTPGIECHTHEYIKTGHIDSKFGFDPDELESIFLQFK 210 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + ++ G+ HIGSQI +++ ++ Q R GH++ +++GGGLGI Y + Sbjct: 211 DIEWGELIGLHAHIGSQIFEVQPHKDLADVMASALQTGRKLGHSLNALNLGGGLGIRYIA 270 Query: 247 DHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSADK 299 PPS SD+ +I + + EPGR +V G+ + K+ S K+ Sbjct: 271 SDDPPSISDWVEVIAAAVVKACRERSLDLPLLMCEPGRSIVGSAGLTLYKIGSRKEIPGI 330 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + + +V+ R I G CE+GD + + ++ Sbjct: 331 KTYLSVDGGMSDNPRPITYQSEYSACLVDKPLIRADEVVTIAGKHCESGDVLLKDFRLPR 390 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 GD+L + TGAY S YN I+V + +I+ R ++L+ D +P Sbjct: 391 SNSGDVLGVFSTGAYNFSMSSNYNRIPKPAAIIVGNGESELIQKRELPEDLLRNDILPDR 450 >gi|48477088|ref|YP_022794.1| diaminopimelate decarboxylase [Picrophilus torridus DSM 9790] gi|48429736|gb|AAT42601.1| diaminopimelate decarboxylase [Picrophilus torridus DSM 9790] Length = 419 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 126/425 (29%), Positives = 187/425 (44%), Gaps = 17/425 (4%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALK 60 F+Y SL ++V L+ LAH TP S I NYL +AF V YALK Sbjct: 4 NFQYKGNSLFLDDVELKSLAHQFGTPLIVLSEKRINNNYLKIKSAFSKHFRHFKVHYALK 63 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN AVI L LG+G D + E A+ + + + I+ +G + +++ AL+ I Sbjct: 64 ANSNPAVISILRRLGAGADAANPNEAEIAMYSGISPDNIIMTGNNLSYNDLKRALEMNIK 123 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 + N+ I+FR+NP I T KFGIP+++ + Sbjct: 124 INFDDVNQMNILKNELPDI------ISFRINPGYGNGEFTGIKTAGPSSKFGIPVNEALN 177 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y A K G+ M GS F++ + + + + + GG Sbjct: 178 GYRTALNAGVKKF-GIHMMAGSNNLDPGYFYELSGIFAGIIKTINNELGISFDFIDIGGG 236 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQC-----KIILEPGRFLVADVGILVTKVISIKK 295 + + ++ A LI + +II+EPGR+LVAD GI + V +K Sbjct: 237 FGVPYKNEAALDINETARLIAMALDGIMDSNPDAEIIIEPGRYLVADAGIALATVTDLKN 296 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 ++ D+ MN +RP LY A HEI I D + DI G ICE DF LN Sbjct: 297 Y-GRSIAGTDLGMNILIRPALYGAVHEIICINK--NDDKLFNYDITGQICENTDFTGLNV 353 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 K+ PGD+L I GAY + S YNS E++++ H+I+ R +++I Sbjct: 354 KLPGLEPGDILGIMNAGAYVSSMSSNYNSLSRAAEVLISDDNVHLIKKRDDIRDIINNTF 413 Query: 416 IPAWL 420 IP L Sbjct: 414 IPGHL 418 >gi|256826621|ref|YP_003150580.1| diaminopimelate decarboxylase [Cryptobacterium curtum DSM 15641] gi|256582764|gb|ACU93898.1| diaminopimelate decarboxylase [Cryptobacterium curtum DSM 15641] Length = 452 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 119/424 (28%), Positives = 201/424 (47%), Gaps = 14/424 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKAN 62 + L V + +LAH T Y Y + + + ++F+ ++ V YA KA Sbjct: 29 TVQDTHLFIGGVDMVELAHQQGTALYVYDEEDLRERMRAYRSSFNRLHPNSEVIYASKAF 88 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 N+A+ + A G LD+ GEL A AA PA+R+ G KT +E++ A+ +G+ C Sbjct: 89 LNKAMARIAAEEGMSLDVSGGGELAIARAAGFPADRVYVHGNNKTPEELEEAITAGVKCI 148 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHS 180 ++S EL ++Q A G + R+ P + A+TH+ I TG ++ KFG + Sbjct: 149 VIDSRIELARVSQIAERHGITQDVFMRITPGVEADTHEYIRTGMEDSKFGFTMRDDFAFK 208 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGG 239 V+++G+ MHIGSQI + S+ +A + D +++ + I +DVGGG Sbjct: 209 CIDDVLAASHVRLAGIHMHIGSQIFALHSYREAVAVAVDFIARIKKTYDYTIDVLDVGGG 268 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVIS 292 +GIAY + +P S ++A+L+ + +I+ EPGR + A G+ + V Sbjct: 269 VGIAYQASDQPASIEEFATLVCESVDEECAKAGIENLRILCEPGRSIAAIPGVTLYTVGI 328 Query: 293 IKKSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 +K + +D M+D +R LY A E N A + G CE+GD + Sbjct: 329 LKTLPGIRKYVAVDGGMSDNIRTALYHADFEAVL-ANKADQPRTEVVTLCGKHCESGDAV 387 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 L+ + P GD++ + TGAY S YN ++ + V ++ R T+ +L+ Sbjct: 388 VLDGSLQHPELGDIVCVFGTGAYCQSMSSNYNGQVRPAVVFVRDGVARVVTRRQTYADLV 447 Query: 412 ELDS 415 D Sbjct: 448 ACDI 451 >gi|126436459|ref|YP_001072150.1| diaminopimelate decarboxylase [Mycobacterium sp. JLS] gi|126236259|gb|ABN99659.1| diaminopimelate decarboxylase [Mycobacterium sp. JLS] Length = 474 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 117/428 (27%), Positives = 192/428 (44%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V + +A TP + S AF G + V YA KA V Sbjct: 46 DGVVSIAGVPVTDIAAQFGTPVFIIDEADFRSRCREISAAFGGGEY-VRYAAKAFLCTEV 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LD+ S GEL AL A PAERI G K+ DE+ LA++SG+ V+S Sbjct: 105 ARWIDEEGLALDVASGGELAVALHAGFPAERIALHGNNKSPDELALAVKSGVGHVVVDSM 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYA 185 E++ L++ A + G + RV + A+TH+ IST ++ KFG+ + ++ Sbjct: 165 IEIERLDEIAAAAGVVQDVLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMAAVRRV 224 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGL 240 +++ G+ HIGSQI + F A + + + + +D+GGGL Sbjct: 225 FETDNLRLVGLHSHIGSQIFDVAGFELAAHRVIGLLRDVVAEFGVDKTAQMSTVDLGGGL 284 Query: 241 GIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV--- 290 GI+Y PP +D A G K+++EPGR + I + +V Sbjct: 285 GISYLPQDDPPPVADLAAKLSAIVREESAAVGLPTPKLVVEPGRAIAGPGTITLYEVGTV 344 Query: 291 --ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 +++ + +V +D M+D +R +LY A +++ + D + +VG CE+G Sbjct: 345 KDVAVASDRYRRYVSVDGGMSDNIRTSLYGAEYDVRLVSR-VSDADPALSRVVGKHCESG 403 Query: 349 DFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + ++ PGDLL + TGAY S YN + V +I R T Sbjct: 404 DIVVRDAWLSGDVAPGDLLGVAATGAYCYSMSSRYNLIGRPAVVAVRDGHARLILRRETV 463 Query: 408 QELIELDS 415 +L+ L+ Sbjct: 464 DDLLSLEV 471 >gi|108800861|ref|YP_641058.1| diaminopimelate decarboxylase [Mycobacterium sp. MCS] gi|119870001|ref|YP_939953.1| diaminopimelate decarboxylase [Mycobacterium sp. KMS] gi|108771280|gb|ABG10002.1| diaminopimelate decarboxylase [Mycobacterium sp. MCS] gi|119696090|gb|ABL93163.1| diaminopimelate decarboxylase [Mycobacterium sp. KMS] Length = 474 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 117/428 (27%), Positives = 192/428 (44%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V + +A TP + S AF G + V YA KA V Sbjct: 46 DGVVSIAGVPVTDIAAQFGTPVFIIDEADFRSRCREISAAFGGGEY-VRYAAKAFLCTEV 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LD+ S GEL AL A PAERI G K+ DE+ LA++SG+ V+S Sbjct: 105 ARWIDEEGLALDVASGGELAVALHAGFPAERIALHGNNKSPDELALAVKSGVGHVVVDSM 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYA 185 E++ L++ A + G + RV + A+TH+ IST ++ KFG+ + ++ Sbjct: 165 IEIERLDEIAAAAGVVQDVLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMAAVRRV 224 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGL 240 +++ G+ HIGSQI + F A + + + + +D+GGGL Sbjct: 225 FETDNLRLVGLHSHIGSQIFDVAGFELAAHRVIGLLRDVVAEFGVDKTAQMSTVDLGGGL 284 Query: 241 GIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV--- 290 GI+Y PP +D A G K+++EPGR + I + +V Sbjct: 285 GISYLPQDDPPPVADLAAKLSAIVREESAAVGLPTPKLVVEPGRAIAGPGTITLYEVGTV 344 Query: 291 --ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 +++ + +V +D M+D +R +LY A +++ + D + +VG CE+G Sbjct: 345 KDVAVASDRYRRYVSVDGGMSDNIRTSLYGAEYDVRLVSR-VSDADPALSRVVGKHCESG 403 Query: 349 DFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + ++ PGDLL + TGAY S YN + V +I R T Sbjct: 404 DIVVRDAWLSGDVAPGDLLGVAATGAYCYSMSSRYNLIGRPAVVAVRDGHARLILRRETV 463 Query: 408 QELIELDS 415 +L+ L+ Sbjct: 464 DDLLSLEV 471 >gi|227503836|ref|ZP_03933885.1| diaminopimelate decarboxylase [Corynebacterium striatum ATCC 6940] gi|227199660|gb|EEI79708.1| diaminopimelate decarboxylase [Corynebacterium striatum ATCC 6940] Length = 444 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 110/427 (25%), Positives = 187/427 (43%), Gaps = 20/427 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + V L +LA TP Y + + AF G + V YA KA + Sbjct: 19 EDGVVTVAGVPLTELAEEYGTPLYVFDEDDFRSRCRDMARAFGGPEH-VHYASKAFITKR 77 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 ++K + G LD+ S E + ALAA P R+ G K + ++L + + I +++ Sbjct: 78 IVKWVNEEGLCLDVASLNEAKVALAAGFPPARMTAHGNNKEREYLELCVDNEIAHVVLDN 137 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E EL LN+ A + G+ P+ RV P ++A+TH+ I+T ++ KFGI + + A + Sbjct: 138 EGELAQLNEIARAAGRVQPVMIRVKPGVDAHTHEFIATSHEDQKFGISLATGAAFDAAKA 197 Query: 187 TLPGVKISGVDMHIGSQIDQIES---FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L + V +H + A ++L + G ++ +D+GGG GI Sbjct: 198 ALESENLQLVGLHCHVGSSVFNAEGFKLAAERVLSLYKRIHTELGVALKELDLGGGFGIP 257 Query: 244 YHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKV------ 290 Y + A +++EPGR LV + V V Sbjct: 258 YMEYEEALDVAKLAQDLLAAVERTAHELDIEPPFVLVEPGRSLVGASAVTVYSVGTVKDV 317 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + ++ +D M+D +RP LY++ ++ +VN D + + +VG CE+GD Sbjct: 318 ETGKAELPIRRYLSVDGGMSDNIRPALYESEYD-VRVVNRFTDGEPVDSRVVGFHCESGD 376 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + RK+ GDLL TGAY + + YN L + V Q +++ R T Sbjct: 377 ILVNERKLPGDITTGDLLTFATTGAYQYMMASRYNGALRPAVVSVRNGQANLMLRRETVD 436 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 437 DLLALEV 443 >gi|91214570|ref|ZP_01251543.1| diaminopimelate decarboxylase [Psychroflexus torquis ATCC 700755] gi|91186997|gb|EAS73367.1| diaminopimelate decarboxylase [Psychroflexus torquis ATCC 700755] Length = 401 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 115/405 (28%), Positives = 193/405 (47%), Gaps = 20/405 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT-MVCYALKANSNQAVIKTLAHLG 75 +L ++ +P Y Y + I Y + AF + + YA+KA SN ++++ LG Sbjct: 5 NLLEVTQQFGSPVYVYDSETIINQYKRLTEAFKKVKHLRLHYAVKALSNLSILRLFNQLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SGLD VS E++ +AA V ++I+F+ G +I E++ A+ G+ + + Sbjct: 65 SGLDTVSIQEVKLGIAAGVNPKKIIFTPNGVSIGELEEAVGLGVQINIDNL-----LILE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + K P+ R+NP + A + IS G + KFGI IHQ+ + I+G Sbjct: 120 QFGTKHPKVPVCIRINPHVMAGGNTNISVGHIDSKFGISIHQMPHVLRIVENTGMT-ING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I F A ++L D+ + ++ + +D G G + YH + Sbjct: 179 IHMHTGSDILDIGVFLYAAEILFDVAAKFQNL----EFLDFGSGFKVPYHEGDIETDVEE 234 Query: 256 YASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + F EPG+FLV++ G + KV +K++ F +D N Sbjct: 235 LGTKLTKRFNEFCKSYGKDLTLAFEPGKFLVSEAGFFLAKVNVVKQTTSTVFAQIDSGFN 294 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 +RP Y + H+I I +P ++ +VG ICET D A N+ I GD+L + Sbjct: 295 HLVRPMFYGSNHDIINISHPKRNKRF--YSVVGYICET-DTFANNKMITEISEGDILAFK 351 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GAY + YNSR PE++ + + H+IR R TF +++ Sbjct: 352 NAGAYCYSMASNYNSRFRPPEVLWHKGKAHLIRQRETFDDIVRNQ 396 >gi|228472782|ref|ZP_04057540.1| diaminopimelate decarboxylase [Capnocytophaga gingivalis ATCC 33624] gi|228275833|gb|EEK14599.1| diaminopimelate decarboxylase [Capnocytophaga gingivalis ATCC 33624] Length = 401 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 123/406 (30%), Positives = 184/406 (45%), Gaps = 20/406 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT-MVCYALKANSNQAVIKTLAHLG 75 L +AH P Y Y I Y AF + + + YA+KA SN +++K + LG Sbjct: 5 DLLSIAHTYGCPVYVYDAYKIRSQYERLIKAFAAVPSLRINYAMKALSNGSILKLMRKLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD VS E++ L A E+I+F+ G +++EI+ A G+ + + Sbjct: 65 AGLDTVSIQEVKLGLHAGFAPEQIIFTPNGVSMEEIEEAASLGVQLNIDNLS-----ILE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + S + P+ R+NP + A + KIS G + KFGI IHQ+ + I+G Sbjct: 120 QFGSKHPQVPVCIRINPHVMAGGNSKISVGHIDSKFGISIHQVPHILRIVENTKM-HING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I+ F A ++L D + R + ID G G + Y + Sbjct: 179 IHMHTGSDILDIDVFLYAAEILFDAAKHFREL----KFIDFGSGFKVPYKEGDIQTDIEE 234 Query: 256 YASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q F EPG+FLV++ G + KV +K++ F +D N Sbjct: 235 LGEKLSQRFLEFCKLYGKDLTLAFEPGKFLVSEAGFFLVKVNVVKQTTSTVFAGIDSGFN 294 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 +RP Y A H I I NP G + +VG ICET D A NR+IA GD+L Sbjct: 295 HLIRPMFYGATHFIENISNPEGKKRF--YSVVGYICET-DTFASNRQIAEISEGDILCFR 351 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY + YNSR E++ Q +IR T ++L+ Sbjct: 352 NAGAYCYTMASNYNSRPRPAEVLWIDGQAKLIRKAETLEDLLRNQV 397 >gi|149370483|ref|ZP_01890172.1| diaminopimelate decarboxylase [unidentified eubacterium SCB49] gi|149356034|gb|EDM44591.1| diaminopimelate decarboxylase [unidentified eubacterium SCB49] Length = 414 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 114/402 (28%), Positives = 184/402 (45%), Gaps = 12/402 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLG 75 L +A +P Y Y T IE Y ++AF + V YA+KA SN +++K + G Sbjct: 5 DLLSIAADYGSPVYVYDATTIENQYKRLTSAFKKVKQVKVHYAVKALSNISILKLIKSFG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD VS E++ L A + I+F+ G ++DEI+ + G+ + + Sbjct: 65 AGLDTVSIQEVQLGLTAGFEPQDIIFTPNGVSLDEIEKVAKLGVQINIDSLS-----VLE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + K P+ R+NP + A + IS G + KFGI IHQI + ++G Sbjct: 120 EFGTRNKNVPVCIRINPHVMAGGNTNISVGHIDSKFGISIHQIPHILRIVENTKM-NVNG 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I+ F A ++L + + ++ + Sbjct: 179 IHMHTGSDILDIDVFLYASEILFETAKNFKNLEFIDFGSGFKVPYKKDDIETNIEEFGEK 238 Query: 256 YASLIHQYFGNLQCKI--ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + + N ++ EPG+FLV++ G + +V +IK++ F +D N +R Sbjct: 239 LSQRFNDFCKNYGKELTLAFEPGKFLVSEAGQFLVQVNNIKQTTSTVFAQVDSGFNHLIR 298 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P LY + HEI I N + +VG ICET D A NR+I+ GD+L + GA Sbjct: 299 PMLYGSQHEIVNISN--PEGRERFYSVVGYICET-DTFANNRRISEINQGDILSFKNAGA 355 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 Y S +NSR E++ + H+IR R TF ++I Sbjct: 356 YCYSMSSNFNSRYRPAEVLWYNEKAHLIRKRETFDDIIHNQI 397 >gi|150020935|ref|YP_001306289.1| diaminopimelate decarboxylase [Thermosipho melanesiensis BI429] gi|149793456|gb|ABR30904.1| diaminopimelate decarboxylase [Thermosipho melanesiensis BI429] Length = 382 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 134/396 (33%), Positives = 208/396 (52%), Gaps = 21/396 (5%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++ +TPFY Y + + + F + +A+KAN+N ++K +A G G+ Sbjct: 2 TEIMGKYETPFYLYFEKTLIERISMVKDVFKEANIFPTFAVKANNNPHLLKIIAKNGFGM 61 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 DI+ EGEL A +P E+I+++G GKT + + + G+ N++S+ E L + Sbjct: 62 DILGEGELHACKLANIPGEKIIWNGNGKTEKQKKVMKEYGVNYVNIDSKEEFDLLWKTEE 121 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 S + RVNPDI+A TH ISTG K KFG+ + + L KI+G+ + Sbjct: 122 SFN----LFLRVNPDIDAKTHPYISTGLKSHKFGVSFNVAKDI------LKSGKITGLHL 171 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQI +E F +A + +L ++ N GG +++ + Y Sbjct: 172 HIGSQITDVEPFKEAIEKTLELAKKYNIKHIN------IGGGWGISYNEEKELDLEKYKK 225 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + +I E GRF++A G+LVTKVI +K++ +KTFV+++ MN +RP LY+ Sbjct: 226 EVIPFLSEFDM-VINEIGRFIIAPAGVLVTKVILVKETENKTFVVVESGMNHLIRPALYN 284 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYHEI + N +I ADIVGP+CETGDF+A +RKI D+L I+ TGAYG Sbjct: 285 AYHEIEVLNNSL---EYIKADIVGPLCETGDFLAKDRKIKKVNTNDILIIKNTGAYGYSM 341 Query: 379 SGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIEL 413 S YN E++V + +IR + T +L Sbjct: 342 SNNYNGTTRPAEVLVTVDGKDILIRRKETIDDLFRN 377 >gi|260062189|ref|YP_003195269.1| diaminopimelate decarboxylase [Robiginitalea biformata HTCC2501] gi|88783751|gb|EAR14922.1| diaminopimelate decarboxylase [Robiginitalea biformata HTCC2501] Length = 420 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 126/422 (29%), Positives = 197/422 (46%), Gaps = 20/422 (4%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAH 73 L +A P Y Y I+ + ++AF + + YA KA SN ++++ L + Sbjct: 3 GKDLLGIAKDFGAPVYVYDAGKIQSQFKRLTHAFRVVPKLKLNYAAKALSNLSILRLLNN 62 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 LGSGLD VS E++ L A E I+++ G +++EI+ A G+ + Sbjct: 63 LGSGLDTVSIQEVQLGLLAGYRPEDIIYTPNGVSLEEIEEAASLGVQINIDNLS-----I 117 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 ++ S P+ R+NP + A + KIS G + KFGI IHQI L L +KI Sbjct: 118 LEQFGSKHPDIPVCIRINPHVMAGGNSKISVGHIDSKFGISIHQIPHLLR-IVELTKMKI 176 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 +G+ MH GS I I+ F A ++L D + +++ ID G G + Y + Sbjct: 177 NGIHMHTGSDILDIDVFLYASEILFDT----AMHFKDLEFIDFGSGFKVPYKEGDIETNV 232 Query: 254 SDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + + F EPG+FLV++ G + +V +K++ F +D Sbjct: 233 EELGEKLGGRFREFCDAYGRELTLAFEPGKFLVSEAGYFLARVNVVKQTTSTVFAGVDSG 292 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 N +RP LY A H I + NP G + +VG ICET D A NR+I GD+L Sbjct: 293 FNHLIRPMLYGANHHIENLSNPGGKER--YYSVVGYICET-DTFASNRRIREISEGDILC 349 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQKTPKQS 427 GAY + YNSR E++ + H+IR R F++LI L + P+Q+ Sbjct: 350 FRNAGAYCFTMASNYNSRFRPAEVLWMDGKAHLIRKRENFEDLIRNQVDVPALAERPRQT 409 Query: 428 SE 429 ++ Sbjct: 410 AD 411 >gi|172040373|ref|YP_001800087.1| hypothetical protein cur_0693 [Corynebacterium urealyticum DSM 7109] gi|171851677|emb|CAQ04653.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 462 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 123/426 (28%), Positives = 193/426 (45%), Gaps = 20/426 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 G + VSL +LA TP + + AF G V YA KA + A Sbjct: 38 ENGEVAIGGVSLPELAATHGTPSFVMDEADFRSRCREMAEAFGG-GERVHYASKAFISTA 96 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + +A G LD+ S GELR AL A PAERI G K + + A+++G+ ++S Sbjct: 97 VCRWVAEEGLSLDVASLGELRIALHADFPAERITVHGNNKNEEFLRAAVEAGVELIVIDS 156 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ L++ A LG + RV P ++ +TH+ I+T ++ KFG + + A Sbjct: 157 LQEIAELSRVARDLGTTQDVLVRVTPGVHVDTHEFIATSHEDQKFGFSLASGKAKQAAEE 216 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ---LRSNGHNIQHIDVGGGLG 241 L G+ + G+ H+GSQ+ + F A + L L +Q + G + +D+GGG G Sbjct: 217 CLAADGLVLRGLHCHVGSQVFDADGFVLAAERLLGLWKQLLSHEATGADFNVLDLGGGYG 276 Query: 242 IAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVIS-- 292 IAY D + A + G + +EPGR + + + +V + Sbjct: 277 IAYTPDQEALDVASVARNLLAKVAEAAEEAGVPTPIVNVEPGRAIAGPAMVTIYRVGTVK 336 Query: 293 ---IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + +V +D M+D +RP LY A ++ +VN + IVG CE+GD Sbjct: 337 DVETSDHTVRRYVSVDGGMSDNIRPALYQAEYD-VRVVNREVSGTLVPTRIVGSHCESGD 395 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + + PGDLL I TGAY S YN L P I V Q ++ R + Sbjct: 396 ILINDVPVPDDVAPGDLLAIAATGAYCYSMSSRYNMFLRPPVITVADGQDRVMIRRERLE 455 Query: 409 ELIELD 414 +++ L+ Sbjct: 456 DILALE 461 >gi|298208274|ref|YP_003716453.1| diaminopimelate decarboxylase [Croceibacter atlanticus HTCC2559] gi|83848195|gb|EAP86065.1| diaminopimelate decarboxylase [Croceibacter atlanticus HTCC2559] Length = 406 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 116/402 (28%), Positives = 188/402 (46%), Gaps = 12/402 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLG 75 L + +P Y Y+ IE Y ++AF + + YA+KA SN A+++ + +G Sbjct: 5 DLLNITEAYGSPVYVYNAETIESQYKRLTSAFKKVKQVRINYAVKALSNLAILQLMKRMG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD VS E++ LAA V ++I+++ G +++EI+ G+ + + Sbjct: 65 AGLDTVSIQEVKLGLAAGVDPKKIIYTPNGVSMEEIEEVAALGVQINIDNLS-----VLE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + K P+ R+NP + A + IS G + KFGI IHQI + L + I+G Sbjct: 120 QFGTKHPKIPVCIRINPHVMAGGNTNISVGHIDSKFGISIHQIPHILR-IVELTRMNING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V MH GS I I+ F A ++L D + + + Sbjct: 179 VHMHTGSDILDIDVFLYASEILFDTAKNFKDLEFIDFGSGFKVPYKEGDIETNIEEFGDK 238 Query: 256 YASLIHQYFGNLQCKI--ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 ++ ++ + EPG+FLV++ G + KV +K++ F +D N +R Sbjct: 239 LSTRFKEFCKEYGKDLTLAFEPGKFLVSEAGKFLAKVNVVKQTTSTVFAQIDSGFNHLIR 298 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P LY + HEI I NP G + +VG ICET D A NR+I + D+L GA Sbjct: 299 PMLYGSQHEIMNISNPNGRQRF--YSVVGYICET-DTFANNRRINEIKENDILAFSNAGA 355 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 Y + YNSR PE++ + H+IR R TF +L++ Sbjct: 356 YCFSMASNYNSRFRPPEVLWYQGKAHLIRERETFDDLLKHQV 397 >gi|86142671|ref|ZP_01061110.1| diaminopimelate decarboxylase [Leeuwenhoekiella blandensis MED217] gi|85830703|gb|EAQ49161.1| diaminopimelate decarboxylase [Leeuwenhoekiella blandensis MED217] Length = 405 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 124/406 (30%), Positives = 195/406 (48%), Gaps = 20/406 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLG 75 +L +A +P Y Y IE Y + AF+ + + + YA+KA SN AV++ + G Sbjct: 5 NLLAIAKEHGSPVYVYDAEKIESQYKRLTGAFNKVKNLRINYAVKALSNLAVLQLIHGFG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G+D VS E+R ALAA + +I+F+ G ++DE++ + G+ + + Sbjct: 65 AGMDTVSIQEVRLALAAGIDPSKIMFTPNGVSLDELEAVAKMGVQINIDNLS-----ILE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + K P+ R+NP + A + IS G + KFGI IHQI L I+G Sbjct: 120 QFGTKHPKTPVCVRINPHVMAGGNTNISVGHIDSKFGISIHQIPHLLRIVKNTGM-NING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I+ F A ++L D + + + +D G G + Y + + Sbjct: 179 IHMHTGSDILDIDVFLHAAEILFDTAKDFKDL----EFLDFGSGFKVPYKEGDIETNIEE 234 Query: 256 YASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + F + + EPG+FLV++ G + +V IK++ F +D N Sbjct: 235 LGEKLSKRFNAFEKNYGKPLTLVFEPGKFLVSEAGKFLVQVNVIKQTTSTVFAQVDSGFN 294 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 +RP Y + HEI I NP G +VG ICET D A NR+IA GD+L Sbjct: 295 HLIRPMFYGSRHEITNISNPKGRERF--YSVVGYICET-DTFATNRRIAEIAEGDILAFS 351 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 +GAY + YNSR E++ + H+IR R TF +LI+ Sbjct: 352 NSGAYCFSMASNYNSRYRPAEVLFLDGKAHLIRERETFDDLIKNQI 397 >gi|254774332|ref|ZP_05215848.1| diaminopimelate decarboxylase [Mycobacterium avium subsp. avium ATCC 25291] Length = 472 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 113/427 (26%), Positives = 191/427 (44%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G V++ +LA TP + ++AF G + V YA K V Sbjct: 47 GVATIAGVAVTELAREYGTPLFVVDEDDFRSRCREIASAFGGGN-NVHYAAKVFLCSEVA 105 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G LD+ + GEL AL A P ERI F G K++ E+ A+++G+ ++S + Sbjct: 106 RWIDEEGLSLDVCTGGELAVALHADFPPERITFHGNNKSVAELTAAVKAGVGHVVLDSMT 165 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--YAS 186 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ + +L A Sbjct: 166 EIERLDAIAADAGIVQDVFVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAALAAVGRVF 225 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH-----IDVGGGLG 241 +++ G+ HIGSQI + F A + + L + +D+GGGLG Sbjct: 226 DTEHLRLVGLHSHIGSQIFDVAGFELAARRVIGLLHDAVEQFGVEKTAQIATVDLGGGLG 285 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y + PP + A ++++EPGR + I + +V Sbjct: 286 ISYLAADEPPPMGELAGKLSAIVQHESAAVRLPTPRLVVEPGRAIAGPGTITLYEVGTVK 345 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D M+D +R LYDA ++ + D A IVG CE+GD Sbjct: 346 DVDVSATAHRRYVSVDGGMSDNIRTALYDAQYDARLVSR-VSDAPAELARIVGKHCESGD 404 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + + RPGDL+ + TGAY S YN + V + ++ R T Sbjct: 405 IVVRDTWVPGDLRPGDLIGVAATGAYCYSLSSRYNMVCRPAVVAVRDGRARLVLRRETVD 464 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 465 DLLSLEV 471 >gi|29726282|pdb|1HKW|A Chain A, Mycobacterium Diaminopimelate Dicarboxylase (Lysa) gi|29726283|pdb|1HKW|B Chain B, Mycobacterium Diaminopimelate Dicarboxylase (Lysa) Length = 453 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 114/427 (26%), Positives = 192/427 (44%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + + L +LA TP + + AF G V YA KA V Sbjct: 22 GVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVA 80 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + ++ G LD+ + GEL AL A P ERI G K++ E+ A+++G+ V+S + Sbjct: 81 RWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSXT 140 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ + + A Sbjct: 141 EIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAXAAVRRVF 200 Query: 189 --PGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI ++ F A + + + I +D+GGGLG Sbjct: 201 ATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLG 260 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y PP ++ A S G K+++EPGR + I + +V Sbjct: 261 ISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVK 320 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D +D +R LY A +++ + D + A +VG CE+GD Sbjct: 321 DVDVSATAHRRYVSVDGGXSDNIRTALYGAQYDVRLVSR-VSDAPPVPARLVGKHCESGD 379 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 I + + RPGDL+ + TGAY S YN + V+ ++ R T Sbjct: 380 IIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNXVGRPAVVAVHAGNARLVLRRETVD 439 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 440 DLLSLEV 446 >gi|330878524|gb|EGH12673.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 412 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 114/417 (27%), Positives = 179/417 (42%), Gaps = 24/417 (5%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 + L +LA TP + Y I+K AFD V +A KA SN +++ L Sbjct: 3 TLADTQLSRLADQYGTPLWVYDGQLIKKRVQQL-AAFD----TVRFAQKACSNLHILRLL 57 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSG-VGKTIDEIDLALQSGIYCFNVESESEL 130 G+ +D VS GEL RAL A A+ + V T D D A + VE Sbjct: 58 RDAGAAVDAVSLGELERALHAGFSAQTAQGTAGVVFTADVFDRATLQRVVEAQVEVNVGS 117 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + +L + R+NP +K +TG + K GI + Sbjct: 118 IDMLHQLGALSPGHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHTHLQDALKLVRHY-- 175 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + I + ++ + + + H+I+ I GGGL + Y + P Sbjct: 176 ---RLHLVGLHMHIGSGVDYQHLQQVCSTMAELVVEMDHDIEAISAGGGLSVPYRAGELP 232 Query: 251 PSSSDYASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 ++S Y + ++ +EPGRFLVA G+LV++V + K K F ++ Sbjct: 233 INTSHYFAQWDHARKRIEAHLGHPIRLEIEPGRFLVAQAGVLVSEVRATKHMGGKHFTLV 292 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA-------LNRKI 357 D ND MRP+LY +YHE++ I + + GP+CE+GD +R + Sbjct: 293 DAGFNDLMRPSLYGSYHEMSLITSRDEPLPMQETVVAGPLCESGDVFTQAEGGIVESRLL 352 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + + GD L GAYGA S YNSR E++V+ Q +IR R +L+ L+ Sbjct: 353 PVAQVGDYLVFHDAGAYGASMSSNYNSRTHAAEVLVDDGQERLIRRRQPLDDLLRLE 409 >gi|320012818|gb|ADW07668.1| diaminopimelate decarboxylase [Streptomyces flavogriseus ATCC 33331] Length = 444 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 121/419 (28%), Positives = 201/419 (47%), Gaps = 15/419 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G+L VSL +A TP Y + T+ F D V YA KA ++A+ Sbjct: 28 GGNLSVGGVSLTDVAERFDTPAYVLDEGEVRARCRTYRAVFP--DADVLYAAKAFLSRAM 85 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G GLD S GEL A+ A PA RIV G K+ +I+ AL+ G+ V+S Sbjct: 86 VRWIDEEGLGLDACSAGELELAVMAGFPAARIVLHGNAKSPRDIETALRLGVGRIVVDSP 145 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 SE+ L + S G++ + RV P ++A H+KI TG KFG+ + + +A A Sbjct: 146 SEIARLAAQVGSGGRQ-KVMVRVVPGVSAGGHEKIRTGTDGQKFGLSLTDGSAQHAIARV 204 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L P ++++G+ HIGSQI ++ + A + + L +++ + +D+GGG G+AY Sbjct: 205 LGQPQLELTGLHCHIGSQITDVKPYLVAVRRMVGLMARIKESHGVTFPELDMGGGHGVAY 264 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 + + A ++ ++++EPGR + A G+ V +V+++K + Sbjct: 265 RAGESALDLTALARRLNGELSASCAAAGLPVPRLVIEPGRAVAAPAGVAVYRVLAVKPTG 324 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 FV +D M+D RP LY A + + + + +VG CE GD +A + + Sbjct: 325 STMFVAVDGGMSDNPRPALYGARYAPRLVGR-STTAEPVATTVVGRHCEAGDILAADVLL 383 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 RPGDLL + +GAY + YN P + V+ ++ R T ++ D Sbjct: 384 PGDVRPGDLLAVPVSGAYQLSMASDYNLVGRPPVVAVHDGSARLLVRRETQEDFRRRDI 442 >gi|212702772|ref|ZP_03310900.1| hypothetical protein DESPIG_00802 [Desulfovibrio piger ATCC 29098] gi|212673829|gb|EEB34312.1| hypothetical protein DESPIG_00802 [Desulfovibrio piger ATCC 29098] Length = 426 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 116/427 (27%), Positives = 192/427 (44%), Gaps = 20/427 (4%) Query: 1 MSAF--KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA 58 MS Y + S LA TP Y Y+ T + + V Y+ Sbjct: 1 MSQIRSSYTDSINFYGGHSPLDLAQQFGTPLYVYNETVLRQRCRELKALSSLPGFGVNYS 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN+N +++ + G +D +S GEL A A+ I++ + DE+ A++ G Sbjct: 61 VKANTNPVLLRIIREEGLVVDAMSPGELYMDQLAGFTADEILYISNNISEDELRNAVRHG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + + + + R NP I A H K+ T KE KFG+ + Sbjct: 121 VLISVDSLS-----QVETLGRVNPGGKVMVRFNPGIGAGHHAKVVTAGKETKFGVSPELL 175 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVG 237 L+A ++G++ HIGS + + + A ++L L ++L ++ N++ ID G Sbjct: 176 DDLFAVLKKYDL-HLAGINQHIGSLFMEADGYIAAAEVLLHLAERLPADVLKNLEVIDFG 234 Query: 238 GGLGIAYHSDHRPPS--SSDYASLIHQYFGNL------QCKIILEPGRFLVADVGILVTK 289 GG GI YH P D +H + ++EPGR++VA+ G+L+ Sbjct: 235 GGFGIPYHKYEDQPRLDMDDLGRRLHGLISGWAEKTGYTGRFLVEPGRYVVAECGVLLGS 294 Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA--DIVGPICET 347 V + K + D+ + D+ N +RP +YD++H++ A +VG ICE+ Sbjct: 295 VNATKTNGDRRYAGTDLGFNVLVRPAMYDSFHDVEVYRKGAQGPDTETVEQSVVGNICES 354 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMT 406 GD +A NR++ L GD+L + GAYG V S +YN R EI++ +IR R T Sbjct: 355 GDILAKNRQLPLLHEGDVLGVLDAGAYGFVMSSSYNQRCRAAEILIQADGSVRLIRRRET 414 Query: 407 FQELIEL 413 ++L Sbjct: 415 LEDLAAC 421 >gi|327402116|ref|YP_004342954.1| diaminopimelate decarboxylase [Fluviicola taffensis DSM 16823] gi|327317624|gb|AEA42116.1| diaminopimelate decarboxylase [Fluviicola taffensis DSM 16823] Length = 413 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 118/404 (29%), Positives = 176/404 (43%), Gaps = 18/404 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 LE +A TP Y Y I Y NAF + + YA+KA SN V+KTL + G+G Sbjct: 6 LESVASKFGTPVYVYDEAKIISQYNRLKNAFGSQEVKLHYAMKALSNINVLKTLKNQGAG 65 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD VS E+ L A A I+++ G EI+ A+ G+ L Sbjct: 66 LDAVSIEEVHLGLRAGFEASEIMYTPNGVAFSEIEEAVALGVIINIDNLSV----LEHFG 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + G P+ R+NP I A H IS G + KFGI IHQ+ + + Sbjct: 122 MVFGSLVPVCIRLNPHIMAGGHANISVGHIDSKFGISIHQLRHIQRIVDHYKLHIV---- 177 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + F DL + ++ ++ +D G G +AY + Sbjct: 178 -GLHMHTGSDIVDADVFLQGADLLYEAATHFPELEFMDFGSGFKVAYKEGDFVTPIEEIG 236 Query: 258 ------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + ++ EPG+FLV++ G+L+ V +K++ F+ ++ N Sbjct: 237 LKIGESFKNFCKEYGRELELWFEPGKFLVSESGVLLVSVNVVKQTTSTVFLGVNSGQNHL 296 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 +RP Y+AYH I I NP G + +VG ICET D +R I+ + GD L I T Sbjct: 297 IRPMFYNAYHRIENISNPKGHK--KLYSVVGYICET-DTFGYDRPISEAKVGDSLAIYNT 353 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAYG S YNSRL E+ V +IR R + +++I + Sbjct: 354 GAYGFSMSNQYNSRLRPAEVYVRDGNAFLIRERESLEDIIRNEI 397 >gi|213964250|ref|ZP_03392482.1| diaminopimelate decarboxylase [Capnocytophaga sputigena Capno] gi|213953111|gb|EEB64461.1| diaminopimelate decarboxylase [Capnocytophaga sputigena Capno] Length = 398 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 125/406 (30%), Positives = 188/406 (46%), Gaps = 20/406 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLG 75 L +AH P Y Y I Y +NAF + + YA+KA SN AV+K + LG Sbjct: 5 DLLNIAHTYGNPVYVYDAEKISSQYQRLTNAFASVPKLRINYAMKALSNIAVLKLMKSLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD VS E++ L A E+I+F+ G +I EI+ A++ G+ + Sbjct: 65 AGLDTVSIQEVQLGLLAGFAPEQIIFTPNGVSISEIEEAMRLGVQLNIDNLS-----FLE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + + P+ R+NP + A + IS G + KFGI IHQI + I+G Sbjct: 120 QFGTQHPEVPVCIRINPHVMAGGNSNISVGHIDSKFGISIHQIPHILRIVENTKM-HING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I+ F A ++L + N ++Q ID G G + Y + + Sbjct: 179 IHMHTGSDILDIDVFLYAAEILF----ETAKNFKDLQFIDFGSGFKVPYKEGDIQTNIEE 234 Query: 256 YASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + F + EPG+FLV++ G + KV +K++ F +D N Sbjct: 235 LGERLSTRFAEFCQEYGRDLTLAFEPGKFLVSEAGCFLVKVNVVKQTTSTVFAGIDSGFN 294 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 +RP Y A H I + NP G + +VG ICET D A NR+IA GD+L Sbjct: 295 HLIRPMFYGATHYIENLSNPEGKKRF--YSVVGYICET-DTFASNRQIAEITEGDILCFH 351 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY + YNSRL E++ + +IR TF++L+ Sbjct: 352 NAGAYCYTMASNYNSRLRPAEVLWQNGEAKLIRKAETFEDLVRNQI 397 >gi|256420454|ref|YP_003121107.1| diaminopimelate decarboxylase [Chitinophaga pinensis DSM 2588] gi|256035362|gb|ACU58906.1| diaminopimelate decarboxylase [Chitinophaga pinensis DSM 2588] Length = 406 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 127/404 (31%), Positives = 185/404 (45%), Gaps = 18/404 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L KLA TP Y Y I+ Y AF D YA KA +N ++K + LG G Sbjct: 13 LVKLAEEFGTPVYIYHAEKIKIQYEKLQTAFQKTDARFFYACKALTNINILKYINSLGCG 72 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD VS E+ L A I+F+ +DEI A + G+ + L Q Sbjct: 73 LDTVSIQEVHLGLKAGFAPNNIIFTPNCVDLDEIIAAKELGVNINIDN----ISILEQFG 128 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G PI R+NP I A + KISTG + KFGI IHQ+ + + K++G+ Sbjct: 129 NRFGDSYPICIRLNPHIMAGGNYKISTGHVDSKFGISIHQLRHIERIVKSTKL-KVTGLH 187 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY- 256 MH GS+I ++ F + +++ + + +++ ID+G G +AY + + Sbjct: 188 MHTGSEIKDVDVFLRGVEIMF----EQAVHFPDLEFIDLGSGFKVAYQAGDPETDINLLG 243 Query: 257 -----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 A ++ EPG+FLV+ G V K IK++ FV ++ N Sbjct: 244 RKLSEAFNKFAATYKRPLQVWFEPGKFLVSQSGYFVVKANVIKQTTATVFVGVNSGFNHL 303 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 +RP YDA+H I I NP G IVG ICET D +RK+ + GD L Sbjct: 304 IRPMFYDAFHLIKNISNPKG--TERIYTIVGNICET-DTFGWDRKLNEVKEGDFLVFYNA 360 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAYG S +NSRL E++V + +IR R T ++L+ Sbjct: 361 GAYGFEMSSNFNSRLKPAEVLVKDGKAQLIRKRDTLEDLLRNQI 404 >gi|126642667|ref|YP_001085651.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 17978] Length = 374 Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 171/373 (45%), Positives = 241/373 (64%), Gaps = 3/373 (0%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 AFD +D +C+A+K+NSN AV+ LA LG+G DIVS GEL R L A A +IVFSG Sbjct: 1 MDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGELARVLKAGGDASKIVFSG 60 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 +GKT +I+ +L GI CFNVES +EL + + A LGKKAPI+ RVNPD++A TH IS Sbjct: 61 LGKTEADIETSLNVGIACFNVESYAELDRIQKVAARLGKKAPISLRVNPDVDAKTHPYIS 120 Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 TG KE+KFGIP ++ Y YA++LP ++I G+D HIGSQ+ + + F A + + + Sbjct: 121 TGLKENKFGIPSDAVYETYQYAASLPNLEIVGIDCHIGSQLTETKPFVDALDRVIVMIDE 180 Query: 224 LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADV 283 L+ G N++HID+GGGLG+ Y + PPS +YA+ + L K+ +EPGR + A+ Sbjct: 181 LKKLGINLKHIDIGGGLGVCYKDE-TPPSVEEYANSMKPALEKLGLKVYMEPGRSISANA 239 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G+L+TKV +K + + F I+D AMND +RP LY+A+ +I +V P D D+VG Sbjct: 240 GVLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPVV-PRTDTEEKTWDLVGA 298 Query: 344 ICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 ICETGDFI +R +A + DLL + GAYG V S YN+R E+MV+G + ++IR Sbjct: 299 ICETGDFIGKDRSLA-LQENDLLTVLGAGAYGFVMSSNYNTRGRAAEVMVSGEKSYLIRE 357 Query: 404 RMTFQELIELDSI 416 R T + L E + + Sbjct: 358 RETVESLWEKERL 370 >gi|331017932|gb|EGH97988.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 412 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 114/411 (27%), Positives = 178/411 (43%), Gaps = 24/411 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +LA TP + Y I+K AFD V +A KA SN +++ L G+ Sbjct: 9 LSRLADQYGTPLWVYDGQLIKKRVQQL-AAFD----TVRFAQKACSNLHILRLLRDAGAA 63 Query: 78 LDIVSEGELRRALAAPVPAERIVFSG-VGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GEL RAL A A+ + V T D D A + VE + + Sbjct: 64 VDAVSLGELERALHAGFSAQNAQGTAGVVFTADVFDRATLQRVVEAQVEVNVGSIDMLHQ 123 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 +L + R+NP +K +TG + K GI + Sbjct: 124 LGALSPGHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHTHLQDALTLVHYY-----RLH 178 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + I + ++ + + + H+I+ I GGGL + Y + P ++S Y Sbjct: 179 LVGLHMHIGSGVDYQHLQQVCSTMAELVVEMDHDIEAISAGGGLSVPYRAGELPINTSHY 238 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + ++ +EPGRFLVA G+LV++V + K K F ++D ND Sbjct: 239 FAQWDHARKRIEAHLGHPIRLEIEPGRFLVAQAGVLVSEVRATKHMGGKHFTLVDAGFND 298 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA-------LNRKIALPRPG 363 MRP+LY +YHE++ I + + GP+CE+GD +R + + + G Sbjct: 299 LMRPSLYGSYHEMSLITSRDEPLPMQETVVAGPLCESGDVFTQAEGGIVESRLLPVAQVG 358 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 D L GAYGA S YNSR E++V+ Q +IR R +L+ L+ Sbjct: 359 DYLVFHDAGAYGASMSSNYNSRTHAAEVLVDDGQERLIRRRQPLDDLLRLE 409 >gi|221200534|ref|ZP_03573576.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD2M] gi|221206215|ref|ZP_03579229.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD2] gi|221174227|gb|EEE06660.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD2] gi|221179875|gb|EEE12280.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD2M] Length = 412 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 127/415 (30%), Positives = 182/415 (43%), Gaps = 27/415 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + G+ Sbjct: 8 LAALAQQYGTPLWVYDADIIRDRIAQLRQ-FD----VIRYAQKANSNVHILKLMRDEGAC 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA GV T D +D S + V + + +R Sbjct: 63 VDAVSLGEIERSLAAGFSPAGE-PEGVVFTADLVDRPTLSAVLKHGVTVNAGSLDMLERV 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP K +TG + K GI I + A K+ G+ Sbjct: 122 GQHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIALVRQYGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + ++ + + S GH+I I GGGL I Y Y Sbjct: 181 MHIGSGV----DYGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVDHYF 236 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 +I +EPGRFLVA+ G LVT+V ++ + FV++D ND Sbjct: 237 RQWDAARKRIERHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDL 296 Query: 312 MRPTLYDAYHE---INYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP +Y +YH + R + I GP+CE+GD + RK+ P+ Sbjct: 297 MRPAMYGSYHAVSVHAHDGALPAGRPQVDIAIAGPLCESGDVFTQDAGGVVTHRKLPQPQ 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL++ GAYGA S YNSR L PE++V+ +IR R T EL+ L++ Sbjct: 357 IGDLLFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLALETF 411 >gi|109947141|ref|YP_664369.1| hypothetical protein Hac_0550 [Helicobacter acinonychis str. Sheeba] gi|109714362|emb|CAJ99370.1| lysA [Helicobacter acinonychis str. Sheeba] Length = 405 Score = 243 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 162/396 (40%), Positives = 239/396 (60%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L++ AF G +++CYALKANSN +++ LA L SG Sbjct: 5 EELFQTYKTPFYFYDFDKIKQAFLSYKEAFKGRKSLICYALKANSNLSILSLLASLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE++RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL+T+ + A Sbjct: 65 DCVSLGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELQTIEKIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVEEKEALEMFLWAKKSAFLEPISVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKTAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 GILDSLQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYH 303 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A HEI I G ++ D+VGP+CE+ D + +PGD L IEK GAYG+ Sbjct: 304 AKHEIRVITPRKGGKVS-PCDVVGPVCESSDTFLKEVNLPELKPGDKLAIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + + +IR + + ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHKIRVIRKKESLEDLWRLE 398 >gi|118467936|ref|YP_889210.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2 155] gi|13124107|sp|Q9X5M1|DCDA_MYCS2 RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|4894689|gb|AAD32591.1|AF126720_2 meso-diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2 155] gi|118169223|gb|ABK70119.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2 155] Length = 474 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 114/428 (26%), Positives = 193/428 (45%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V + LA TP + + AF G V YA KA + Sbjct: 46 DGVVTIAGVPVTDLAAKFGTPLFVIDEDDFRTRCRDIAAAFGGGQY-VHYAAKAFLCSEI 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LD+ + GEL AL A PA RI G K++ E+ A+Q+G+ ++SE Sbjct: 105 ARWVDEEGLSLDVATGGELAVALHAGFPASRITVHGNNKSVAELTAAVQAGVGHVVLDSE 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AYA 185 E++ L+Q A + G + RV + A+TH+ IST ++ KFG+ + ++ Sbjct: 165 IEIERLDQIAGAAGVVQDVLVRVTVGVEAHTHEFISTAHEDQKFGLSLATGAAMNAIRRV 224 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGL 240 +++ G+ HIGSQI + F A + + + + +D+GGGL Sbjct: 225 FATDNLRLVGLHSHIGSQIFDVAGFEIAAHRVIGLLRDVVAEFGVEKTSQMSIVDLGGGL 284 Query: 241 GIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV--- 290 GI+Y PP + A G K+++EPGR + I + +V Sbjct: 285 GISYLPHDDPPPMKELADKLLEIVRTESAAVGLPTPKLVVEPGRAIAGPGTITLYEVGTV 344 Query: 291 --ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 +++ ++A + +V +D M+D +R +LY A ++ + D A IVG CE+G Sbjct: 345 KDVAVSQTAHRRYVSVDGGMSDNIRTSLYAAQYDARLVSR-VSDAPPALARIVGKHCESG 403 Query: 349 DFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + ++ PGDL+ + TGAY S YN + V Q ++ R T Sbjct: 404 DIVVRDTWVSDDIAPGDLIGVAATGAYCYSMSSRYNLLCRPAVVAVADGQARLVLRRETV 463 Query: 408 QELIELDS 415 ++L+ L+ Sbjct: 464 EDLLSLEV 471 >gi|161520274|ref|YP_001583701.1| diaminopimelate decarboxylase [Burkholderia multivorans ATCC 17616] gi|189353549|ref|YP_001949176.1| diaminopimelate decarboxylase [Burkholderia multivorans ATCC 17616] gi|29365470|dbj|BAC66455.1| Diaminopimelate decarboxylase [Burkholderia multivorans] gi|160344324|gb|ABX17409.1| diaminopimelate decarboxylase [Burkholderia multivorans ATCC 17616] gi|189337571|dbj|BAG46640.1| diaminopimelate decarboxylase [Burkholderia multivorans ATCC 17616] Length = 412 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 126/415 (30%), Positives = 182/415 (43%), Gaps = 27/415 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + G+ Sbjct: 8 LAALAQQYGTPLWVYDADVIRDRIAQLRQ-FD----VIRYAQKANSNVHILKLMRDEGAC 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA GV T D +D + + V + + +R Sbjct: 63 VDAVSLGEIERSLAAGFSPAGE-PEGVVFTADLVDRPTLAAVLKHGVTVNAGSLDMLERV 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP K +TG + K GI I + A K+ G+ Sbjct: 122 GQHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIALVRQYGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + ++ + + S GH+I I GGGL I Y Y Sbjct: 181 MHIGSGV----DYGHLSQVCDAMVDLVASLGHDIDAISAGGGLSIPYRDGEPRVDVDHYF 236 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 +I +EPGRFLVA+ G LVT+V ++ + FV++D ND Sbjct: 237 RQWDAARKRIERHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDL 296 Query: 312 MRPTLYDAYHE---INYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP +Y +YH + R + I GP+CE+GD + RK+ P+ Sbjct: 297 MRPAMYGSYHAVSVHAHDGALPEGRPQVDIAIAGPLCESGDVFTQDAGGVVTHRKLPQPQ 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL++ GAYGA S YNSR L PE++V+ +IR R T EL+ L++ Sbjct: 357 IGDLLFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLALETF 411 >gi|124022700|ref|YP_001017007.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9303] gi|123962986|gb|ABM77742.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT 9303] Length = 455 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 109/420 (25%), Positives = 180/420 (42%), Gaps = 11/420 (2%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQA 66 L L KLA TP Y + ++ A ++ YA KANS+ Sbjct: 32 RLIVGGCQLSKLAECYGTPLYVLDEATLRAACQSYRGALQRHYPGPSLPIYASKANSSLM 91 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + +A G GLD+VS GEL AL VP + IV G K+ E+ LA ++G+ ++ Sbjct: 92 MSSLVASEGFGLDVVSAGELLTALKGGVPGDCIVLHGNNKSDQELLLAYRNGVT-IVADN 150 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 + +L L+Q A + R P I +TH+ I TG + KFG Q+ S+ Sbjct: 151 QHDLDRLSQLVPVGADPANLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLESVLNQLL 210 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 +++G+ HIGSQI ++E ++ Q R GH + ++VGGGLG+ Y S Sbjct: 211 GCRWARLTGLHAHIGSQIFELEPHQDLADVMAGALQLARRLGHPVMDLNVGGGLGVRYVS 270 Query: 247 DHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADK 299 PPS ++ ++ + +++ EPGR LVA G+ + +V S K Sbjct: 271 SDDPPSIDNWVKVVAEAVNQACRSRNLDLPRLMCEPGRSLVAAAGVTLYRVGSRKTIPGL 330 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + + + + D +VG CE+GD + + + Sbjct: 331 RTYLSVDGGMSDNPRPITYQSLYTACLADRPLDSPDETITLVGKHCESGDVLLKDLALPY 390 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 G++L + TGAY S YN ++V+ +++ R ++L+ D +P Sbjct: 391 ASSGEVLVVFATGAYNVSMSSNYNRIPRPAAVLVHSGHSELVQRREQPEDLLRYDVMPER 450 >gi|295106272|emb|CBL03815.1| diaminopimelate decarboxylase [Gordonibacter pamelaeae 7-10-1-b] Length = 458 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 126/424 (29%), Positives = 204/424 (48%), Gaps = 14/424 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKAN 62 + + L V + +LA T Y + T+ AF + V YA KA Sbjct: 36 EVRDEHLFVGGVDMVELAREQGTALYVMDERDMRTRMETYLEAFRSRYGNADVVYASKAF 95 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 N+ + + G LD+ GEL ALA PAERI G KT E+ A+Q+G+ Sbjct: 96 LNKEAARIVNEEGLCLDVSGGGELACALATGFPAERIFMHGNNKTPQELREAIQAGVGRI 155 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHS 180 ++S EL+ +++ A LG + P+ R+ P + A+TH+ I TG ++ KFG + Sbjct: 156 VIDSRIELRRISEIAGELGVEQPVYMRITPGVEADTHQYIRTGCEDSKFGFTMREDFAFK 215 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGG 239 P V+++G+ HIGSQI + S+ +A +++ DL ++R G + +D+GGG Sbjct: 216 CVKDVLAAPNVRLAGLHCHIGSQIFALHSYPEAVEVMVDLMARIREAYGIELSELDMGGG 275 Query: 240 LGIAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVIS 292 LG+AY +D +P S ++A I G + ++++EPGR LVA G+ + V Sbjct: 276 LGVAYTADDKPASIDEFAETITAAVRTACAKHGMPEPRLLVEPGRSLVATAGVTLYTVGI 335 Query: 293 IKKSADKTFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK + + +D M+D +R LY A +E A R I I G CE+GD + Sbjct: 336 IKTLPNIRKYVAVDGGMSDNIRTALYHADYEPVVANKAAQPRTEI-VTIAGKHCESGDAV 394 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 ++ + P GD++ + TGAY S YN + + V + + R T+++L Sbjct: 395 VIDMPMQRPDLGDVVAVFGTGAYNHTMSSNYNGQPRPAVVFVKDGEARVTTRRETYEDLY 454 Query: 412 ELDS 415 D Sbjct: 455 SRDI 458 >gi|134294044|ref|YP_001117780.1| diaminopimelate decarboxylase [Burkholderia vietnamiensis G4] gi|134137201|gb|ABO58315.1| diaminopimelate decarboxylase [Burkholderia vietnamiensis G4] Length = 412 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 126/415 (30%), Positives = 184/415 (44%), Gaps = 27/415 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I + FD ++ YA KANSN ++K + G+ Sbjct: 8 LATLAQQYGTPLWVYDADVIRERIAQLRQ-FD----VIRYAQKANSNLHILKLMREEGAC 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA GV T D ID + + V + + R Sbjct: 63 VDAVSLGEIERSLAAGFSPAGE-PEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARV 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP K +TG + K GI I + K+ G+ Sbjct: 122 GEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVHRYGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + ++ + + S GH+I I GGGL I Y Y Sbjct: 181 MHIGSGV----DYGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYF 236 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + +I +EPGRFLVA+ G LVT+V ++ + FV++D ND Sbjct: 237 NQWDAARKRIERHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPQHDFVLIDAGFNDL 296 Query: 312 MRPTLYDAYHEINYIVNP---AGDRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP++Y +YH ++ R + I GP+CE+GD + RK+ P+ Sbjct: 297 MRPSMYGSYHAVSVHAPDGTLPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKLPQPQ 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL++ GAYGA S YNSR L PE++V+ +IR R T EL+ L++ Sbjct: 357 IGDLLFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLALETF 411 >gi|78357706|ref|YP_389155.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220111|gb|ABB39460.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 434 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 107/414 (25%), Positives = 187/414 (45%), Gaps = 22/414 (5%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 +L +P Y Y+ + + V Y+ KAN+N ++++ + G +D Sbjct: 22 ELVETYGSPLYVYNENVLRRRCRELKGLSSHPGFRVNYSAKANANLSLLRIIRSEGLVVD 81 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 +S GE+ LAA + I + + +E+ A+ G+ Sbjct: 82 AMSPGEIAMHLAAGFTPDEITYVCNNVSAEELRNAVDHGLLVSVDSLPQLDLL-----GQ 136 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + + R+NP I A HKK+ TG KE KFGI ++ ++G++ H Sbjct: 137 VNPGGKVMIRINPGIGAGHHKKVVTGGKETKFGIGPDDGDAVRRILKRHNLT-LAGLNQH 195 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 IGS + +S+ +A + L +Q S + ID GGG GI Y + P A+ Sbjct: 196 IGSLFMEPDSYMEAVEFLLREAEQWDSL----EVIDFGGGFGIPYRKYEKQPRLDMEATG 251 Query: 260 IHQYFGNLQC--------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + ++EPGR++ A+ G+++ V ++K + ++ F D+ N Sbjct: 252 RMLDDCIGRWAERTGYNGRFMIEPGRYVTAECGVVLGTVHAVKNNGERRFAGTDLGFNVL 311 Query: 312 MRPTLYDAYHE-INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 RP +YDA+H+ Y + + + IVG ICE+GD +A R++ + GD++ + Sbjct: 312 QRPVMYDAFHDVEIYREDGVPQQETMQQTIVGNICESGDIMAAARELPEIQEGDIIAMLD 371 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDSIPAWLQKT 423 GAYG S +YN RL E++V+ + +IR R T +L+ P +KT Sbjct: 372 AGAYGFAMSSSYNQRLRPAEVLVDKDGRDRLIRRRETLDDLLAC--FPEHAEKT 423 >gi|326202543|ref|ZP_08192411.1| diaminopimelate decarboxylase [Clostridium papyrosolvens DSM 2782] gi|325987127|gb|EGD47955.1| diaminopimelate decarboxylase [Clostridium papyrosolvens DSM 2782] Length = 416 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 118/413 (28%), Positives = 187/413 (45%), Gaps = 21/413 (5%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 N + EKL +P Y Y+ + + N D + + Y++KANSN V+K + Sbjct: 11 FFGNSNPEKLIKEYGSPLYVYNEKILRQKCRDMKNLVDYKNFIPNYSIKANSNLTVLKIV 70 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G D +S GE++ L A E + F + E+ A+++G+ Sbjct: 71 KEEGLRADAMSAGEIQLLLHAGFKPENLFFVPNNVSEAELKYAVENGVLVSVDSLS---- 126 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + + A R NP + A H+K+ T K+ KFG+ I ++ + A A + Sbjct: 127 -QLEILGKINQGGKAAVRFNPGVGAGHHEKVVTAGKKTKFGVNIDCVNEVKAIAKKY-NM 184 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 KI GV+ HIGS + +S+ + K L + +Q I +D+GGG GI Y Sbjct: 185 KICGVNQHIGSLFMEGDSYIEGVKSLLAVAEQFED----IDFVDMGGGFGIPYKKQEGQE 240 Query: 252 SSSDYASLIHQYFGNLQCK--------IILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + Q EPGR++VA+ G+L+ V + K + +V Sbjct: 241 PLDLASFKEKLTQVLEQWTDKYGKKILFKTEPGRYIVAESGVLLGNVYATKANYGNKYVG 300 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPA--GDRLHIHADIVGPICETGDFIALNRKIALPR 361 D+ N RP +YD++H+I N D +VG ICE+GD IA NR++ + Sbjct: 301 TDIGFNVLARPVMYDSHHDIEVYRNGNPLNDSEVEEVTVVGNICESGDIIAKNRELPVIN 360 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 GD+L I GAYG S YN RL E+++ + +IR R TF++LI Sbjct: 361 QGDILGIMDAGAYGFAMSSNYNMRLRPAEVLIKEDGEPVLIRRRDTFEDLIAN 413 >gi|28867441|ref|NP_790060.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato str. DC3000] gi|28850675|gb|AAO53755.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato str. DC3000] Length = 412 Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats. Identities = 114/411 (27%), Positives = 178/411 (43%), Gaps = 24/411 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +LA TP + Y I+K AFD V +A KA SN +++ L G+ Sbjct: 9 LSRLADQYGTPLWVYDGQLIKKRVQQL-AAFD----TVRFAQKACSNLHILRLLRDAGAA 63 Query: 78 LDIVSEGELRRALAAPVPAERIVFSG-VGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GEL RAL A A+ + V T D D A + VE + + Sbjct: 64 VDAVSLGELERALHAGFSAQTTQGAAGVVFTADVFDRATLQRVVEAQVEVNVGSIDMLHQ 123 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 +L + R+NP +K +TG + K GI + Sbjct: 124 LGALSPGHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHTHLQDALTLVHYY-----RLH 178 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + I + ++ + + + H+I+ I GGGL + Y + P ++S Y Sbjct: 179 LVGLHMHIGSGVDYQHLQQVCSTMAELVVEMDHDIEAISAGGGLSVPYRAGELPINTSHY 238 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + ++ +EPGRFLVA G+LV++V + K K F ++D ND Sbjct: 239 FAQWDHARKRIEAHLGHPIRLEIEPGRFLVAQAGVLVSEVRATKHMGGKHFTLVDAGFND 298 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA-------LNRKIALPRPG 363 MRP+LY +YHE++ I + + GP+CE+GD +R + + + G Sbjct: 299 LMRPSLYGSYHEMSLITSRDEPLPMQETVVAGPLCESGDVFTQAEGGIVESRLLPVAQVG 358 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 D L GAYGA S YNSR E++V+ Q +IR R +L+ L+ Sbjct: 359 DYLVFHDAGAYGASMSSNYNSRTHAAEVLVDDGQERLIRRRQPLDDLLRLE 409 >gi|221209571|ref|ZP_03582552.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD1] gi|221170259|gb|EEE02725.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD1] Length = 412 Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats. Identities = 126/415 (30%), Positives = 182/415 (43%), Gaps = 27/415 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + G+ Sbjct: 8 LAALAQQYGTPLWVYDADVIRDRIAQLRQ-FD----VIRYAQKANSNVHILKLMRDEGAC 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA GV T D +D + + V + + +R Sbjct: 63 VDAVSLGEIERSLAAGFSPAGE-PEGVVFTADLVDRPTLAAVLKHGVTVNAGSLDMLERV 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP K +TG + K GI I + A K+ G+ Sbjct: 122 GQHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIALVRQYGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + ++ + + S GH+I I GGGL I Y Y Sbjct: 181 MHIGSGV----DYGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVDHYF 236 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 +I +EPGRFLVA+ G LVT+V ++ + FV++D ND Sbjct: 237 RQWDAARKRIERHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDL 296 Query: 312 MRPTLYDAYHE---INYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP +Y +YH + R + I GP+CE+GD + RK+ P+ Sbjct: 297 MRPAMYGSYHAVSVHAHDGALPEGRPQVDIAIAGPLCESGDVFTQDAGGVVTHRKLPQPQ 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL++ GAYGA S YNSR L PE++V+ +IR R T EL+ L++ Sbjct: 357 IGDLLFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLALETF 411 >gi|326336124|ref|ZP_08202296.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691633|gb|EGD33600.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 401 Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats. Identities = 128/406 (31%), Positives = 186/406 (45%), Gaps = 20/406 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT-MVCYALKANSNQAVIKTLAHLG 75 L + H P Y Y I Y + AFD + + + YA+KA SN +++K + LG Sbjct: 5 DLLSIVHTFGNPVYVYDADKITSQYKRLTKAFDHVPSLRINYAMKALSNVSILKLMRKLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD VS E++ L A E+I+F+ G +I+EI+ A G+ + + Sbjct: 65 AGLDTVSIQEVKLGLHAGFTPEQIIFTPNGVSIEEIEEAASLGVQLNIDNLS-----ILE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + S P+ R+NP + A + KIS G + KFGI IHQI + I+G Sbjct: 120 QFGSKHPNIPVCIRINPHVMAGGNSKISVGHIDSKFGISIHQIPHILRIVENTKM-HING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I+ F A ++L D + R Q ID G G I Y + + Sbjct: 179 IHMHTGSDILDIDVFLYAAEILFDTAKYFREL----QFIDFGSGFKIPYKEGDVQTNIEE 234 Query: 256 YASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + F EPG+FLV++ G + KV IK++ F +D N Sbjct: 235 LGEKLSNRFLEFCKLYGRNLTLAFEPGKFLVSEAGFFLVKVNVIKQTTSTVFAEIDSGFN 294 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 +RP Y A H I + NP G + +VG ICET D A NR+IA GD+L Sbjct: 295 HLIRPMFYGAIHFIENLSNPEGKKRF--YSVVGYICET-DTFASNRQIAEISEGDILCFR 351 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY + YNSR E++ G Q +IR TF++L+ Sbjct: 352 NAGAYCYTMASNYNSRPRPAEVLWIGGQAKLIRKAETFEDLLHNQI 397 >gi|124026196|ref|YP_001015312.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. NATL1A] gi|123961264|gb|ABM76047.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. NATL1A] Length = 454 Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats. Identities = 108/421 (25%), Positives = 177/421 (42%), Gaps = 12/421 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 L L +LA TP Y ++ T+ ++ + ++ +A KANS+ Sbjct: 31 KKLVVGGCQLSELAKKYGTPLYVLDEFSLRTACKTYISSLNKHYPGKSLPLFASKANSSL 90 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ +A G GLD VSEGEL A+ V + IVF G K+ DE++ A + + Sbjct: 91 AICAVIASEGFGLDAVSEGELLTAINGGVKEKDIVFHGNNKSQDELNFAYSNNVTIVLDN 150 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 L + S K A + R P I +TH+ I TG + KFG + S+ Sbjct: 151 --YHDIELLKNIASDNKPAKLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDDLKSILEEL 208 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 T ++G+ HIGSQI +++ ++ D + + GH + +++GGGLGI Y Sbjct: 209 KTYKWANLTGLHAHIGSQIFEVQPHIDLAGVMADALKLAKEIGHPVVDLNLGGGLGIKYV 268 Query: 246 SDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSAD 298 + PPS + +I + + + EPGR LVA+ G+ + K+ + K Sbjct: 269 QEDNPPSIEKWVEIISKAVVKACRERNLDLPRLMCEPGRSLVANSGLTIYKIGAKKVVPG 328 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + + +V+ + I G CE+GD + + + Sbjct: 329 VRTYLSVDGGMSDNPRPITYQSLYSACLVDKPMNTNFEKVTIAGKHCESGDVLLKDFLLP 388 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 GD L + TGAY S YN IMV + + R ++L++LD +P Sbjct: 389 SCESGDFLAVFGTGAYNYSMSSNYNRIPRPATIMVGKGSAELTQRRELPEDLLQLDVLPD 448 Query: 419 W 419 Sbjct: 449 R 449 >gi|220929933|ref|YP_002506842.1| diaminopimelate decarboxylase [Clostridium cellulolyticum H10] gi|220000261|gb|ACL76862.1| diaminopimelate decarboxylase [Clostridium cellulolyticum H10] Length = 416 Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats. Identities = 115/413 (27%), Positives = 186/413 (45%), Gaps = 21/413 (5%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 N + EKL +P Y Y+ + + N + + + Y++KANSN ++IK + Sbjct: 11 FFGNSNPEKLLKEFGSPLYVYNEKILRQKCRDMKNLVEYKNFVPNYSIKANSNLSLIKIV 70 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G D +S GE++ L A E + F + E+ A+ +G+ Sbjct: 71 KEEGLRADAMSAGEIQLLLHAGFEPEELFFVPNNVSESELKYAVDNGVLVSVDSLS---- 126 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + A R NP + A H+K+ T K+ KFG+ I + + A + Sbjct: 127 -QLELLGKINTGGKAAVRFNPGVGAGHHEKVVTAGKKTKFGVNIDCVDQVKEIAGKY-NM 184 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 KI GV+ HIGS + +S+ + K L + +Q I +D+GGG GI Y+ Sbjct: 185 KICGVNQHIGSLFMEGDSYIEGVKSLLSVAEQFED----IDFVDMGGGFGIPYNKQEGQK 240 Query: 252 SSSDYASLIHQYFGNLQCK--------IILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + Q EPGR++VA+ G+++ V + K + +V Sbjct: 241 PLDLASFKEKLTQVLEQWTDKYGKKILFKTEPGRYIVAESGVILGNVYTTKANYGNKYVG 300 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPA--GDRLHIHADIVGPICETGDFIALNRKIALPR 361 D+ N RP +YD++H+I N + +VG ICE+GD IA NRK+ + + Sbjct: 301 TDIGFNVLARPVMYDSHHDIEVYRNGKPLNEAETEEVTVVGNICESGDIIAKNRKLPVIK 360 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 GD+L I GAYG S YN RL E+++ + +IR R TF++LI Sbjct: 361 EGDILGIMDAGAYGFAMSSNYNMRLRPAEVLIKEDGEPTLIRRRDTFEDLIAN 413 >gi|213970713|ref|ZP_03398838.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato T1] gi|301382601|ref|ZP_07231019.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato Max13] gi|302059222|ref|ZP_07250763.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato K40] gi|302133620|ref|ZP_07259610.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924547|gb|EEB58117.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato T1] Length = 412 Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats. Identities = 114/411 (27%), Positives = 177/411 (43%), Gaps = 24/411 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +LA TP + Y I+K AFD V +A KA SN +++ L G+ Sbjct: 9 LSRLADQYGTPLWVYDGQLIKKRVQQL-AAFD----TVRFAQKACSNLHILRLLRDAGAA 63 Query: 78 LDIVSEGELRRALAAPVPAERIVFSG-VGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GEL RAL A A+ + V T D D A + VE + + Sbjct: 64 VDAVSLGELERALHAGFSAQNAQGTAGVVFTADVFDRATLQRVVEAQVEVNVGSIDMLHQ 123 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 +L + R+NP +K +TG + K GI + Sbjct: 124 LGALSPGHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHTHLQDALTLVRYY-----RLH 178 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + I + ++ + + + H+I+ I GGGL + Y + P ++S Y Sbjct: 179 LVGLHMHIGSGVDYQHLQQVCSTMAELVVEMDHDIEAISAGGGLSVPYRAGELPINTSHY 238 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + ++ +EPGRFLVA G+LV++V + K K F ++D ND Sbjct: 239 FAQWDHARKRIEAHLGHPIRLEIEPGRFLVAQAGVLVSEVRATKHMGGKHFTLVDAGFND 298 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA-------LNRKIALPRPG 363 MRP+LY +YHE++ I + + GP+CE+GD +R + + G Sbjct: 299 LMRPSLYGSYHEMSLITSRDEPLPMQETVVAGPLCESGDVFTQAEGGIVESRLLPAAQVG 358 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 D L GAYGA S YNSR E++V+ Q +IR R +L+ L+ Sbjct: 359 DYLVFHDAGAYGASMSSNYNSRTHAAEVLVDDGQERLIRRRQPLDDLLRLE 409 >gi|225012701|ref|ZP_03703136.1| diaminopimelate decarboxylase [Flavobacteria bacterium MS024-2A] gi|225003234|gb|EEG41209.1| diaminopimelate decarboxylase [Flavobacteria bacterium MS024-2A] Length = 408 Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 124/412 (30%), Positives = 193/412 (46%), Gaps = 20/412 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L +A P Y Y IE+ + NAF G+ + YA KA SN +++ + +GS Sbjct: 6 LLSIAKQEGHPVYVYDANKIEQQFTRLQNAFKGVEKLRINYACKALSNLSILGLMKKMGS 65 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GLD VS E++ + A + I+F+ G +++EI+ A + G+ + ++ Sbjct: 66 GLDTVSIQEVQMGIKAGFKPKDIIFTPNGVSLEEIEKAAKIGVQINIDNLS-----ILEQ 120 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + P+ R+NP + A + IS G + KFGI IHQI + I+GV Sbjct: 121 FGTKHPNIPVCIRINPHVMAGGNSNISVGHIDSKFGISIHQIPHVLRIVENTKM-HINGV 179 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MH GS I IE F A ++L D Q ++ + +D G G + Y + + Sbjct: 180 HMHTGSDILDIEVFLYASEILFDTALQFKNL----EFLDFGSGFKVPYREGDIETNIEEL 235 Query: 257 ASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + + F EPG+FLV+ G + +V ++K++ F +D N Sbjct: 236 GEKLTERFHRFCETYGSTLELAFEPGKFLVSQAGYFLVQVNAVKQTTSTVFAQVDSGFNH 295 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 +RP LY ++HEI I P G +VG ICET D NRKIA GD+L + Sbjct: 296 LIRPMLYGSHHEIKNISKPNGKERF--YTVVGYICET-DTFGSNRKIAEISEGDILAFQN 352 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQK 422 GAY + YNSR EI+ +Q H+IR R TF++L+ + + +K Sbjct: 353 AGAYCFTMASNYNSRFRPAEILWYNNQAHVIRKRETFEDLVYNQVLLDFKEK 404 >gi|325528845|gb|EGD05893.1| diaminopimelate decarboxylase [Burkholderia sp. TJI49] Length = 412 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 126/415 (30%), Positives = 182/415 (43%), Gaps = 27/415 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + G+ Sbjct: 8 LAALAQQYGTPLWVYDADVIRDRIAQLRQ-FD----VIRYAQKANSNLHILKLMREAGAC 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA GV T D ID + + V + + R Sbjct: 63 VDAVSLGEIERSLAAGFSPAGE-PEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARV 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP K +TG + K GI I + K+ G+ Sbjct: 122 GEQAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + ++ + + S GH+I I GGGL I Y Y Sbjct: 181 MHIGSGV----DYGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVDHYF 236 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 +I +EPGRFLVA+ G LVT+V ++ + FV++D ND Sbjct: 237 KQWDAARKRIERHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDL 296 Query: 312 MRPTLYDAYHE---INYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP++Y +YH + R + I GP+CE+GD + R++A P+ Sbjct: 297 MRPSMYGSYHAVSVHAHDGALPEGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRRLAQPQ 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL++ GAYGA S YNSR L PE++V+ +IR R T EL+ L++ Sbjct: 357 IGDLLFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIDELLALETF 411 >gi|134105016|pdb|2O0T|A Chain A, The Three Dimensional Structure Of Diaminopimelate Decarboxylase From Mycobacterium Tuberculosis Reveals A Tetrameric Enzyme Organisation gi|134105017|pdb|2O0T|B Chain B, The Three Dimensional Structure Of Diaminopimelate Decarboxylase From Mycobacterium Tuberculosis Reveals A Tetrameric Enzyme Organisation gi|134105018|pdb|2O0T|C Chain C, The Three Dimensional Structure Of Diaminopimelate Decarboxylase From Mycobacterium Tuberculosis Reveals A Tetrameric Enzyme Organisation gi|134105019|pdb|2O0T|D Chain D, The Three Dimensional Structure Of Diaminopimelate Decarboxylase From Mycobacterium Tuberculosis Reveals A Tetrameric Enzyme Organisation Length = 467 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 113/427 (26%), Positives = 192/427 (44%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + + L +LA TP + + AF G V YA A V Sbjct: 24 GVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAXAFLCSEVA 82 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + ++ G LD+ + GEL AL A P ERI G K++ E+ A+++G+ V+S + Sbjct: 83 RWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMT 142 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYAS 186 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ + ++ Sbjct: 143 EIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVF 202 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI ++ F A + + + I +D+GGGLG Sbjct: 203 ATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLG 262 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y PP ++ A S G K+++EPGR + I + +V Sbjct: 263 ISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVK 322 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D M+D +R LY A +++ + D + A +VG CE+GD Sbjct: 323 DVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSR-VSDAPPVPARLVGKHCESGD 381 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 I + + RPGDL+ + TGAY S YN + V+ ++ R T Sbjct: 382 IIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVD 441 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 442 DLLSLEV 448 >gi|226509744|ref|NP_001141045.1| hypothetical protein LOC100273126 [Zea mays] gi|194702382|gb|ACF85275.1| unknown [Zea mays] Length = 488 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 139/418 (33%), Positives = 231/418 (55%), Gaps = 10/418 (2%) Query: 8 EGSLHAENVSLEKL---AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 +G L+ E V +E A +PFY YS I +N+ + +A G+ +++ YA+KAN+N Sbjct: 74 DGYLYCEGVRVEDAMTAAER--SPFYLYSKPQILRNFAAYRDALQGLRSIIGYAVKANNN 131 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 V++ L LG G +VS ELR AL A R +F+G GKT++ + LA +SG++ NV Sbjct: 132 LPVLRVLRELGCGAVLVSGNELRLALQAGFDPARCIFNGNGKTLEHLKLAAESGVF-VNV 190 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +SE +L+ + + A + GKK P+ R+NPD++ H ++TG K KFGI ++ Sbjct: 191 DSEFDLENIVRAARATGKKVPVLLRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDS 250 Query: 185 ASTLPG-VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI- 242 + P +K+ GV H+GS I +++ F A L+ + ++R+ G ++++++GGGLGI Sbjct: 251 IKSYPNEIKLVGVHCHLGSTITKVDIFRDAAVLMLNYVDEIRAQGFKLEYLNIGGGLGID 310 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 +H+D P+ D + + + + +I+EPGR L+A+ V +V +K + K F+ Sbjct: 311 YHHTDAVLPTPMDLINTVRELVLSQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFI 370 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 ++D +M + +RP+LY AY I + P DIVGP+CE+ DF+ +R++ P Sbjct: 371 VVDGSMAELIRPSLYGAYQHIELVSPPTPGAEAATFDIVGPVCESADFLGKDRELPTPDE 430 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE-LDSIPA 418 G L + GAY + TYN +L PE V IR + ++ D +PA Sbjct: 431 GAGLVVHDAGAYCMSMASTYNLKLRPPEYWVEADGSIVKIRHGEKLDDYMKFFDGLPA 488 >gi|146299915|ref|YP_001194506.1| diaminopimelate decarboxylase [Flavobacterium johnsoniae UW101] gi|146154333|gb|ABQ05187.1| diaminopimelate decarboxylase [Flavobacterium johnsoniae UW101] Length = 407 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 119/405 (29%), Positives = 179/405 (44%), Gaps = 13/405 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLG 75 L +LA +P Y Y I+ Y + AF + + V YA+KA SN A+++ L ++G Sbjct: 5 DLLQLADQFGSPLYVYDAEKIQSQYNRLTKAFSKVENLRVNYAMKALSNVAILQLLKNMG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SGLD VS E+ L A ERI F+ G +++EI+ G+ + + Sbjct: 65 SGLDTVSIQEVLLGLHAGYEPERIFFTPNGVSLEEIEEVAAMGVQINIDNLS-----ILE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + P+ R+NP + A + IS G + KFGI +HQI + I G Sbjct: 120 QFGTKHPHIPVCIRINPHVMAGGNANISVGHIDSKFGISVHQIPHILRIVENTKMS-IVG 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I IE F A ++L D + + Sbjct: 179 IHMHTGSDILDIEVFLYAAEILFDTAKHFKDLQFLDFGSGFKVPYKKDDIETDIEELGKK 238 Query: 256 YASLIHQYFGNLQCKI--ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + + + I EPG+FLV++ G + KV +K++ F +D N +R Sbjct: 239 LSKRFNAFCAEYGRDLTLIFEPGKFLVSEAGHFLVKVNVVKQTTSTVFAGVDSGFNHLIR 298 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P LY + H I I NP G +VG ICET D A NR+I GD+L GA Sbjct: 299 PMLYGSSHHIENISNPKGKERF--YSVVGYICET-DTFANNRRIQEITEGDILSFRNAGA 355 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS-IP 417 Y S YNSR E++ Q +IR TF++L++ +P Sbjct: 356 YCFSMSSNYNSRYKPAEVLWMNGQGILIRQAETFEDLLKNQIPLP 400 >gi|315443350|ref|YP_004076229.1| diaminopimelate decarboxylase [Mycobacterium sp. Spyr1] gi|315261653|gb|ADT98394.1| diaminopimelate decarboxylase [Mycobacterium sp. Spyr1] Length = 472 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 111/429 (25%), Positives = 197/429 (45%), Gaps = 22/429 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G++ V + ++A TP + S+AF G + V YA KA Sbjct: 45 NDGAVSIAGVPVAEIAAEFGTPVFVIDEADFRSRCRDISSAFGGGEY-VHYAAKAFLCGE 103 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G LD+ + GEL AL A PA RI G K++ E+ A++ G+ V+S Sbjct: 104 IARWVDEEGLSLDVATGGELAIALHAGFPAGRITVHGNNKSVAELTAAVKHGVGHVVVDS 163 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AY 184 E++ L++ A G + RV + A+TH+ IST ++ KFG+ + ++ Sbjct: 164 IIEIERLDRIAADNGVVQDVLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMEAVRR 223 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGG 239 +++ G+ HIGSQI + F A + + + + +D+GGG Sbjct: 224 VFEAGNLRLVGLHSHIGSQIFDVAGFEIAAHRVIGLLRDVVAEFGVEKTSQMDIVDLGGG 283 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKV-- 290 LGI+Y D PP S+ A+ + K+++EPGR + I + +V Sbjct: 284 LGISYLPDDNPPPMSELAAKLKAIVARESAAVGLPAPKLVVEPGRAIAGPGTITLYEVGT 343 Query: 291 ---ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 +++ ++ + +V +D M+D +R +LY A +++ + D + +VG CE+ Sbjct: 344 VKDVAVSPTSHRRYVSVDGGMSDNIRTSLYGAEYDVRLLSR-VSDATPTLSRVVGKHCES 402 Query: 348 GDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 GD + + ++ PGDLL + TGAY S YN + V + +I R T Sbjct: 403 GDIVVRDAWLSEDVTPGDLLGVAATGAYCYSMSSRYNLIGRPAVVAVRDGRARLILRRET 462 Query: 407 FQELIELDS 415 ++L+ L+ Sbjct: 463 VEDLLSLEV 471 >gi|89890668|ref|ZP_01202177.1| diaminopimelate decarboxylase [Flavobacteria bacterium BBFL7] gi|89516813|gb|EAS19471.1| diaminopimelate decarboxylase [Flavobacteria bacterium BBFL7] Length = 407 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 119/406 (29%), Positives = 185/406 (45%), Gaps = 20/406 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT-MVCYALKANSNQAVIKTLAHLG 75 L +A +P Y Y I Y ++AF + + YA+KA SN +++K LG Sbjct: 5 DLLNIAQEHGSPVYVYDAHRIVSQYERLTSAFAQAKSLRIHYAVKALSNLSILKLFKQLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD VS E++ LAA V +I+++ G +++EI+ G+ + + Sbjct: 65 AGLDTVSLQEVQLGLAAGVEPHKIIYTPNGVSLEEIEQVAAMGVQINIDNLS-----ILE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + S P+ R+NP + A + IS G + KFGI IHQI L ++G Sbjct: 120 QFGSKHPTIPVCVRINPHVMAGGNANISVGHIDSKFGISIHQIPHLLRIVENTNMT-VNG 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V MH GS I I F A ++L + + + + ID G G + Y D Sbjct: 179 VHMHTGSDILDIGVFLYATEILFETAAKFKDL----EFIDFGSGFKVPYKEGDVSTDIED 234 Query: 256 YASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + F EPG+FLV++ G + KV +K++ F +D N Sbjct: 235 LGEQLSERFNKFCKDYGRDITLAFEPGKFLVSEAGYFLAKVNVVKQTTSTVFAGIDSGFN 294 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 +RP LY +YH I I N G + +VG ICET D A NR+I+ GD+L Sbjct: 295 HLIRPMLYGSYHGIKNISNETG--RNRFYSVVGYICET-DTFAQNRQISEITEGDILAFA 351 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY + YNSR E++ + H+IR R T +++++ Sbjct: 352 NAGAYCYSMTSNYNSRYRPAEVLWYNGEAHLIRERETMEDILKHQV 397 >gi|269219843|ref|ZP_06163697.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 848 str. F0332] gi|269210748|gb|EEZ77088.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 848 str. F0332] Length = 461 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 131/437 (29%), Positives = 201/437 (45%), Gaps = 27/437 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-----DTMVCYALKAN 62 G + V + +LA TP Y + + A D V YA KA Sbjct: 27 GGEIAIGGVGVSELAAEYGTPLYVLDEDVLRARARAWKEAMDEAFSRLRGADVYYAGKAF 86 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 AV K +AH G +D SEGELR ALAA VP RI G K+ +E++LAL++ + F Sbjct: 87 LCVAVAKAVAHEGLAVDACSEGELRTALAAGVPGSRIGMHGNNKSREEVELALRAEVGHF 146 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V+S +EL+ ++ A G A + RV ++A H+ +ST ++ KFG+ I + Sbjct: 147 VVDSLAELEFVDSIARDEGAVASVMLRVTTGVHAGGHEYMSTAVEDQKFGLSIASGAAWQ 206 Query: 183 A--YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGG 239 A P +++ G+ HIGSQI +E+F +A + + DL + R G ++ +D GGG Sbjct: 207 AVEKTVNTPNLRLLGLHSHIGSQILVVEAFEEAARAVLDLRARVHREIGLELREVDFGGG 266 Query: 240 LGIAYHSDHRPPSSS---------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GI Y P S AS + I EPGR +V G+ + V Sbjct: 267 YGIRYTGGDSAPPSPAQLASALASVVASHSAESGIEPPRVSI-EPGRNIVGPAGVTLYTV 325 Query: 291 ISIKK----SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 ++K + +V +D M+D +RP LYDA + R + +VG CE Sbjct: 326 GTVKTVELEDGPRRYVSVDGGMSDNIRPALYDAAYTAALASREGEGRAR--SRVVGKHCE 383 Query: 347 TGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 +GD + + + GD+L + TGAYG + YN + V G I R Sbjct: 384 SGDIVVRDVSLPEDLAAGDILAVPATGAYGRSMASNYNHVPRPGVVAVRGGASRWIVRRE 443 Query: 406 TFQELIELDSIPAWLQK 422 T ++L+ LD+ +L++ Sbjct: 444 TVEDLLALDA--DYLRR 458 >gi|325285021|ref|YP_004260811.1| diaminopimelate decarboxylase [Cellulophaga lytica DSM 7489] gi|324320475|gb|ADY27940.1| diaminopimelate decarboxylase [Cellulophaga lytica DSM 7489] Length = 416 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 118/402 (29%), Positives = 185/402 (46%), Gaps = 12/402 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLG 75 L K+A P Y Y + I Y +NAF G+ + YA KA SN ++++ + LG Sbjct: 5 DLLKIAKTYGDPVYVYDSEKIVSQYQRLTNAFKGVKKLKLNYAAKALSNISILRLMNSLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SGLD VS E+ L A E I+++ G +++EI+ A G+ + + Sbjct: 65 SGLDTVSIQEVELGLLAGFKPESIIYTPNGVSLEEIEKAAALGVRINIDNLS-----VLE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + S P+ R+NP + A + IS G + KFGI IHQI L L + I+G Sbjct: 120 QFGSKHPNIPVCIRINPHVMAGGNSNISVGHIDSKFGISIHQIPHLLR-IVDLTKMNING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I+ F A ++L + + ++ + Sbjct: 179 IHMHTGSDILDIDVFLYASEILFETAKNFKNLDFIDFGSGFKVPYKTGDIETNVEELGQK 238 Query: 256 YASLIHQYFGNLQCKI--ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 ++ + + ++ EPG+FLV++ G + KV +K++ F +D N +R Sbjct: 239 LSAKFNDFCKEYGKELTLAFEPGKFLVSESGFFLAKVNVVKQTTSTVFASIDSGFNHLIR 298 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P LY + HEI I N + + +VG ICET D A NR+I GD+L GA Sbjct: 299 PMLYGSSHEILNISN--PEGRERYYSVVGYICET-DTFASNRRINEISEGDILCFRNAGA 355 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 Y + YNSR PE++ + + +IR R TF +LI+ Sbjct: 356 YCFTMASNYNSRFRPPEVLWHNGEAILIRERETFDDLIKNQI 397 >gi|305664829|ref|YP_003861116.1| diaminopimelate decarboxylase [Maribacter sp. HTCC2170] gi|88707951|gb|EAR00190.1| diaminopimelate decarboxylase [Maribacter sp. HTCC2170] Length = 413 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 129/420 (30%), Positives = 196/420 (46%), Gaps = 26/420 (6%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAH 73 N L K+A P Y Y + I + +NAF G++ + YA KA SN A+++ + Sbjct: 3 NADLLKIAKTYGNPVYVYDSEKIISQFNRLTNAFKGVNQLKLNYAAKALSNIAILRLMNS 62 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 LGSGLD VS E++ L A E I+F+ G +++EI+ A + G+ + Sbjct: 63 LGSGLDTVSIQEVQLGLLAGFKPESIIFTPNGVSLEEIEEAAKLGVQINIDNLS-----V 117 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 ++ P+ R+NP + A + IS G + KFGI IHQI L L + I Sbjct: 118 LEQFGGKHPDIPVCIRINPHVMAGGNSNISVGHIDSKFGISIHQIPHLLR-IVELTKMNI 176 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 +G+ MH GS I I+ F A ++L + N N+ ID G G + Y + Sbjct: 177 NGIHMHTGSDILDIDVFLYASEILF----ETAKNFKNLDFIDFGSGFKVPYKEGDIETNI 232 Query: 254 SDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + + F + EPG+FLV++ G + KV +K++ F +D Sbjct: 233 EELGKKLTGRFNEFCKEYGKELTLAFEPGKFLVSEAGHFLAKVNVVKQTTSTVFASVDSG 292 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 N +RP LY A H I I NP G + +VG ICET D NR+I GD+L Sbjct: 293 FNHLIRPMLYGASHTIENISNPQG--RERYYSVVGYICET-DTFGNNRRINEISEGDILC 349 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS------IPAWLQ 421 + GAY + YNSR E++ + + H+IR R TF +LI+ +P ++ Sbjct: 350 FKNAGAYCFTMASNYNSRYRPAEVLWHDDKAHLIRERETFDDLIKNQVDVKDLFVPEKVK 409 >gi|260577571|ref|ZP_05845510.1| diaminopimelate decarboxylase [Corynebacterium jeikeium ATCC 43734] gi|258604295|gb|EEW17533.1| diaminopimelate decarboxylase [Corynebacterium jeikeium ATCC 43734] Length = 470 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 121/430 (28%), Positives = 197/430 (45%), Gaps = 24/430 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + V + ++A TP + + AF G V YA KA ++ Sbjct: 42 RQGEVTIGGVPIAEIAETFGTPAFVMDEEDFRARCRRLAKAFGG-GHYVHYASKAFLSKT 100 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + + G LD+ S GEL+ ALAA PAERI G K+ + + LA+ G V+S Sbjct: 101 VARWVMEEGLSLDVASLGELQVALAAGFPAERITVHGNNKSPEFLRLAVSEGAELIVVDS 160 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E++ L+ A LGK + RV P ++ +TH+ I+T ++ KFG + + A + Sbjct: 161 LQEIEALSTVAGELGKSQDVLVRVTPGVHVDTHEFIATSHEDQKFGFSLASGAAHRAAMA 220 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-------RSNGHNIQHIDVG 237 GV++ G+ H+GSQ+ + F A + L L +QL ++ +D+G Sbjct: 221 CHTADGVRLRGLHCHVGSQVFEASGFALAAERLLGLWKQLLDSTAALSDAPTSLDTLDLG 280 Query: 238 GGLGIAYHSDHRPPSSSDYASLIH-------QYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG GIAY D + AS + + G K+ +EPGR + I + +V Sbjct: 281 GGYGIAYMPDQEALDVEEVASDLKSKVRKAAEAAGVPVPKLNVEPGRAIAGPSMITLYRV 340 Query: 291 ISIKKS-----ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 ++K + ++ +D M+D +RP LY A ++ N + IVG C Sbjct: 341 GTVKDVEVADGMTRRYISVDGGMSDNIRPALYQAEYDCRV-ANREVAGELLPTRIVGSHC 399 Query: 346 ETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPR 404 E+GD + + + RPGDLL I TGAY + YN P + V + ++ R Sbjct: 400 ESGDVLVNDALVPDDVRPGDLLMIGATGAYCYAMASRYNMMTRPPVVRVADGEARLMIRR 459 Query: 405 MTFQELIELD 414 T +++ L+ Sbjct: 460 ETIDDVLALE 469 >gi|68536438|ref|YP_251143.1| hypothetical protein jk1353 [Corynebacterium jeikeium K411] gi|68264037|emb|CAI37525.1| lysA [Corynebacterium jeikeium K411] Length = 470 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 121/430 (28%), Positives = 197/430 (45%), Gaps = 24/430 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + V + ++A TP + + AF G V YA KA ++ Sbjct: 42 RQGEVTIGGVPIAEIAETFGTPAFVMDEEDFRARCRRLAKAFGG-GHYVHYASKAFLSKT 100 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + + G LD+ S GEL+ ALAA PAERI G K+ + + LA+ G V+S Sbjct: 101 VARWVMEEGLSLDVASLGELQVALAAGFPAERITVHGNNKSPEFLRLAVSEGAELIVVDS 160 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E++ L+ A LGK + RV P ++ +TH+ I+T ++ KFG + + A + Sbjct: 161 LQEIEALSTVAGELGKSQDVLVRVTPGVHVDTHEFIATSHEDQKFGFSLASGAAHRAAMA 220 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-------RSNGHNIQHIDVG 237 GV++ G+ H+GSQ+ + F A + L L +QL ++ +D+G Sbjct: 221 CHTADGVRLRGLHCHVGSQVFEASGFALAAERLLGLWKQLLDSTAALSDAPTSLDTLDLG 280 Query: 238 GGLGIAYHSDHRPPSSSDYASLIH-------QYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG GIAY D + AS + + G K+ +EPGR + I + +V Sbjct: 281 GGYGIAYMPDQEALDVEEVASDLKSKVRKAAEAAGVPVPKLNVEPGRAIAGPSMITLYRV 340 Query: 291 ISIKKS-----ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 ++K + ++ +D M+D +RP LY A ++ N + IVG C Sbjct: 341 GTVKDVEVADGMTRRYISVDGGMSDNIRPALYQAEYDCRV-ANREVAGELLPTRIVGSHC 399 Query: 346 ETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPR 404 E+GD + + + RPGDLL I TGAY + YN P + V + ++ R Sbjct: 400 ESGDVLVNDALVPDDVRPGDLLMIGATGAYCYAMASRYNMMTRPPVVRVADGEARLMIRR 459 Query: 405 MTFQELIELD 414 T +++ L+ Sbjct: 460 ETIDDVLALE 469 >gi|300858250|ref|YP_003783233.1| diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis FRC41] gi|300685704|gb|ADK28626.1| Diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis FRC41] gi|302330524|gb|ADL20718.1| diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis 1002] Length = 443 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 109/423 (25%), Positives = 189/423 (44%), Gaps = 18/423 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G + VSL ++A TP + + AF G + V YA KA + + Sbjct: 21 NGEVTVAGVSLSEMAERYGTPVFVVDEDDFRDRCKDMAAAFGGAE-KVHYASKAFLTRRI 79 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LDI S GE + AL A P RI G K+ + + + + + ++S Sbjct: 80 ARWVEEEGLNLDIASLGEFQVALIANFPPGRITAHGNNKSEEFLRVLVSHRVGHIVIDSM 139 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AYA 185 +EL+ L + A G P+ RV P I A+TH+ I+T ++ KFG + + Sbjct: 140 TELERLEKIAAEAGVTQPVMVRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAYAAAKRV 199 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLGIAY 244 + + G+ H+GSQ+ + F A + + L + G +++ +D+GGG GIAY Sbjct: 200 IESASLYLIGLHCHVGSQVFDAQGFSLAAQRVLTLYSKIHSELGIDLEQLDLGGGYGIAY 259 Query: 245 HSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKV-----IS 292 D P + A + + ++++EPGR + + V V + Sbjct: 260 TEDETPLDVTSVAQDLLAAVDDVARTLDIDAPEVLVEPGRAIAGPSTVTVYSVGTVKDVH 319 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + + ++ +D M+D +RP LY+A ++ ++N + + IVG CE GD + Sbjct: 320 VTDKQLRRYIAVDGGMSDNIRPALYEAEYD-VRVINRNVAGDLVPSRIVGSHCEAGDILI 378 Query: 353 LNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 +R++ GDL+ + TGAY S YN + V Q ++ R T ++L+ Sbjct: 379 HDRELPSGIIEGDLIALAATGAYCFAMSSRYNMMGRPAVVSVKAGQSRVMVRRETIEDLL 438 Query: 412 ELD 414 LD Sbjct: 439 ALD 441 >gi|319936660|ref|ZP_08011073.1| diaminopimelate decarboxylase [Coprobacillus sp. 29_1] gi|319808217|gb|EFW04782.1| diaminopimelate decarboxylase [Coprobacillus sp. 29_1] Length = 436 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 104/424 (24%), Positives = 169/424 (39%), Gaps = 14/424 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKAN 62 + +L+ ++V L TP Y S + F + + +A K+ Sbjct: 9 QIRNKTLYIDDVDAMDLVKQYGTPLYVMSEGHMRYQMNELKEKFLDKYENVLPLFASKSF 68 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S + K G G+D VS GE+ AL A +I F G K EI+ A+ + F Sbjct: 69 SCLEIYKLAKEYGIGIDCVSAGEISIALKAGFDPHKIYFHGNNKLPSEIEYAITHDVDHF 128 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS-- 180 +++ E+ + + A L K RV P+I A H I TG K+ KFG Sbjct: 129 VIDNFHEIDLVEEIATKLNKTIYATVRVVPEIKAGGHGFIQTGHKDTKFGFSARHGIYLD 188 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++ G+ HIGSQ+ + ++ A K ++ + GG Sbjct: 189 AIQKIINSHSIQFEGIHCHIGSQVFDLYAYVSAMKRFVGFAYEIYDKLGVMVTKINAGGG 248 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFG--------NLQCKIILEPGRFLVADVGILVTKVIS 292 ++ P + + +++EPGR++V + GI + + + Sbjct: 249 YGIAYTKKDEPLDFEVITTEIMKTIQEGYEKRGWDMPMVLVEPGRYVVGNAGITLYTIGT 308 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 +K+ D +D M D +R LYDA ++ VN A + + A I G +CE+GD + Sbjct: 309 VKEIPDVRTYVSIDGGMTDNIRTCLYDADYDGII-VNKAEEPKTLKATISGKVCESGDIV 367 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 KIA P PGD+ TGAY + YN + + + R TF +LI Sbjct: 368 VKEVKIAKPEPGDIFAQFSTGAYHYSMASNYNQLPKPAVVFTYKGKSKRVIRRQTFDDLI 427 Query: 412 ELDS 415 D Sbjct: 428 YYDV 431 >gi|302205971|gb|ADL10313.1| diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis C231] gi|308276206|gb|ADO26105.1| diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis I19] Length = 443 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 109/423 (25%), Positives = 190/423 (44%), Gaps = 18/423 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G + VSL ++A TP + + AF G + V YA KA + + Sbjct: 21 NGEVTVAGVSLSEMAERYGTPVFVVDEDDFRDRCKDMAAAFGGAE-KVHYASKAFLTRRI 79 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LDI S GE + AL+A P RI G K+ + + + + + ++S Sbjct: 80 ARWVEEEGLNLDIASLGEFQVALSANFPPGRITAHGNNKSEEFLRVLVSHRVGHIVIDSM 139 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AYA 185 +EL+ L + A G P+ RV P I A+TH+ I+T ++ KFG + + Sbjct: 140 TELERLEKIAAEAGVTQPVMVRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAYAAAKRV 199 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLGIAY 244 + + G+ H+GSQ+ + F A + + L + G +++ +D+GGG GIAY Sbjct: 200 IESASLYLIGLHCHVGSQVFDAQGFSLAAQRVLTLYSKIHSELGIDLEQLDLGGGYGIAY 259 Query: 245 HSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKV-----IS 292 D P + A + + ++++EPGR + + V V + Sbjct: 260 TEDETPLDVTSVAQDLLAAVDDVARTLDIDAPEVLVEPGRAIAGPSTVTVYSVGTVKDVH 319 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + + ++ +D M+D +RP LY+A ++ ++N + + IVG CE GD + Sbjct: 320 VTDKQLRRYIAVDGGMSDNIRPALYEAEYD-VRVINRNVAGDLVPSRIVGSHCEAGDILI 378 Query: 353 LNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 +R++ GDL+ + TGAY S YN + V Q ++ R T ++L+ Sbjct: 379 HDRELPSGIIEGDLIALAATGAYCFAMSSRYNMMGRPAVVSVKAGQSRVMVRRETIEDLL 438 Query: 412 ELD 414 LD Sbjct: 439 ALD 441 >gi|261839146|gb|ACX98911.1| diaminopimelate decarboxylase [Helicobacter pylori 52] Length = 405 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 163/396 (41%), Positives = 233/396 (58%), Gaps = 2/396 (0%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LA L SG Sbjct: 5 EELFQTHKTPFYLYDFGKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLASLESGA 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS GE+ RAL A + RIVFSGVGK+ EI+ AL+ I NVES EL T+ A Sbjct: 65 DCVSIGEIHRALKAGIKPYRIVFSGVGKSESEIEQALKLNILFLNVESFMELTTIETIAQ 124 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 SLG KA I+ R+NP+I+A TH ISTG KE+KFG+ + ++ +A ++ V Sbjct: 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGSQ+ +E +A + + + + L + G +++ DVGGG+G++Y + DYA Sbjct: 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSY-ENEETIKLYDYAQ 243 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I L II EPGR +VA+ G L+T+V+ KK+ +K FVI+D MNDF+RP+LY Sbjct: 244 RILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYH 303 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A H I I G ++ D+VGP+CE+ D + PGD L IEK GAYG+ Sbjct: 304 AKHAIRVITPYKGRKIS-PCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSM 362 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YNSR + E+ + Q +IR R ++L L+ Sbjct: 363 ASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLE 398 >gi|78061687|ref|YP_371595.1| diaminopimelate decarboxylase [Burkholderia sp. 383] gi|77969572|gb|ABB10951.1| diaminopimelate decarboxylase [Burkholderia sp. 383] Length = 412 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 130/415 (31%), Positives = 185/415 (44%), Gaps = 27/415 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + G+ Sbjct: 8 LATLAQQYGTPLWVYDADVIRDRIAQLRQ-FD----VIRYAQKANSNIHILKLMREEGAC 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA GV T D ID + + V + + R Sbjct: 63 VDAVSLGEIERSLAAGFSPA-SEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARI 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP K +TG + K GI I + K+ G+ Sbjct: 122 GEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + ++ + + S GH+I I GGGL I Y Y Sbjct: 181 MHIGSGV----DYGHLSQVCDAMVALVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYF 236 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 S +I +EPGRFLVA+ G LVT+V ++ + FV++D ND Sbjct: 237 SQWDAARKRIERHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDL 296 Query: 312 MRPTLYDAYHE---INYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP++Y +YHE + R + I GP+CE+GD + RK+A P+ Sbjct: 297 MRPSMYGSYHEVSVHTHEGALLAGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQ 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL++ GAYGA S YNSR L PE++V+ S +IR R T EL+ L++ Sbjct: 357 IGDLLFLHDAGAYGASMSSNYNSRPLAPEVLVDRSAPRLIRRRQTIDELLALETF 411 >gi|319942204|ref|ZP_08016520.1| diaminopimelate decarboxylase [Sutterella wadsworthensis 3_1_45B] gi|319804257|gb|EFW01149.1| diaminopimelate decarboxylase [Sutterella wadsworthensis 3_1_45B] Length = 467 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 149/416 (35%), Positives = 233/416 (56%), Gaps = 9/416 (2%) Query: 6 YFE--GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 Y L E+ L +AH TP Y YS AI + + + AF +CYA+KA S Sbjct: 19 YRNASNELCCEDTLLSDIAHRWGTPTYVYSRAAITERWNAYETAFGTAPHQICYAVKAAS 78 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 + +++ LA LG+G D VS GE+ R LAA ++IVFSGV KT +I AL +GI CFN Sbjct: 79 TKGILEVLAALGAGFDCVSGGEILRVLAAGGDPKKIVFSGVAKTPADIAFALTAGIKCFN 138 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 +ES +EL + A +LG KA I+ RVNP+I+A+ ++TG + KFG+ + + +LY Sbjct: 139 IESPAELDRIANTARNLGLKAHISVRVNPNIDAHVDHHVATGLGDSKFGVKLTDVIALYQ 198 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A+ L ++I G+ HIGS ++ + ++L +L G ++H D+GGG G+A Sbjct: 199 KAAELKEIEIEGISCHIGSLVESTVPYMSEIEVLSVFVNELLDRGIALKHFDIGGGAGVA 258 Query: 244 YHSDHRPPSSSDYAS----LIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS-IKKSAD 298 Y +D + S+ I +I++EPGR ++A G+L+T+V + Sbjct: 259 YKADEKTLEPSELIPAVVAQIRSLVKIPDIEILIEPGRSIIAQAGVLLTRVEYLKSGLFE 318 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + F ++D +M + +RP +Y ++HE V+P D +IVG +CE+ D + +R++A Sbjct: 319 RNFCVVDASMTELVRPAMYGSHHE-IEPVSPRSDIEPERLNIVGGVCESSDILGSDRELA 377 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 PGDLL I GAYG + TYNSR L E++V+G+ +R RMT +L+ + Sbjct: 378 -VAPGDLLAIRTAGAYGMSMASTYNSRPLPMEVLVDGAAIRPLRRRMTALDLLSDE 432 >gi|284035161|ref|YP_003385091.1| diaminopimelate decarboxylase [Spirosoma linguale DSM 74] gi|283814454|gb|ADB36292.1| diaminopimelate decarboxylase [Spirosoma linguale DSM 74] Length = 424 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 118/421 (28%), Positives = 189/421 (44%), Gaps = 19/421 (4%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 + + + V + ++A P Y Y I + ++F G++ + YA KA + Sbjct: 1 MQLNNRTYQIQGVDVLEIADQFGLPLYVYDADKIIEKIGLLRSSFAGVNLKIKYAAKALT 60 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N +++K + G +D VS E R + A +I+F+ G + +EI A+ G+ Sbjct: 61 NISILKLMRQQGVEMDSVSVNEARMGMMAGFEPGQIMFTPSGVSFEEIREAVSLGLQLNV 120 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 L L + G + PI+ R+NP I+ + KISTG + KFGI I Q + A Sbjct: 121 DS----LPLLEWVGQTYGTQVPISIRINPHISEGGNIKISTGHADSKFGISILQRDQIRA 176 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + AF ++ L S+ N+ ID G G +A Sbjct: 177 VVEQY-----QIPVAGLHIHTGSDFKNAGAFLKGAEVLFDLASDYPNLSFIDFGSGFKVA 231 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSA 297 Y + + F N EPG+FLV++ G L+ K +K++ Sbjct: 232 YKEGDHITDVEELGHQVSAAFQNFCKNYGRDLELWFEPGKFLVSESGHLLVKTNIVKENP 291 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA---GDRLHIHADIVGPICETGDFIALN 354 +TFV +D +N +RP +YDAYH+I I NP+ D ++VG ICET D A + Sbjct: 292 TRTFVAVDSGLNHLIRPMMYDAYHDIKNISNPSIPGEDTAEKTYNVVGYICET-DTFATD 350 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R + +PGD+L E GAYG + YN+R E++V ++IR R TF++L+ Sbjct: 351 RALPEVKPGDVLSFENAGAYGFSMASNYNARFRPAEVLVYEGTPYLIRQRETFEDLVRGQ 410 Query: 415 S 415 Sbjct: 411 V 411 >gi|254254367|ref|ZP_04947684.1| Diaminopimelate decarboxylase [Burkholderia dolosa AUO158] gi|124899012|gb|EAY70855.1| Diaminopimelate decarboxylase [Burkholderia dolosa AUO158] Length = 424 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 126/415 (30%), Positives = 181/415 (43%), Gaps = 27/415 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + G+ Sbjct: 20 LAALAQQYGTPLWVYDADVIRDRIAQLRQ-FD----VIRYAQKANSNVHILKLMRDEGAC 74 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA GV T D ID + + V + + R Sbjct: 75 VDAVSLGEIERSLAAGFSPAGE-PEGVVFTADLIDRPTLAAVLKHRVTVNAGSLDMLARV 133 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP K +TG + K GI I + K+ G+ Sbjct: 134 GEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRRYGL-KLVGIH 192 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + ++ + + S GH+I I GGGL I Y Y Sbjct: 193 MHIGSGV----DYGHLSQVCDAMVGLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYF 248 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 S +I +EPGRFLVA+ G LV +V ++ + FV++D ND Sbjct: 249 SQWDAARKRIERHLGHAVRIEIEPGRFLVAEAGTLVAEVQAVNRRPKHDFVLIDAGFNDL 308 Query: 312 MRPTLYDAYHE---INYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP++Y +YH + R + I GP+CE+GD + RK+ P+ Sbjct: 309 MRPSMYGSYHAVSVHAHDGALPEGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLPQPQ 368 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL++ GAYGA S YNSR L PE++V+ +IR R T EL+ L++ Sbjct: 369 IGDLLFVHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLALETF 423 >gi|195619652|gb|ACG31656.1| diaminopimelate decarboxylase [Zea mays] Length = 488 Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 139/418 (33%), Positives = 232/418 (55%), Gaps = 10/418 (2%) Query: 8 EGSLHAENVSLEKL---AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 +G L+ E V +E A +PFY YS I +N+ + +A G+ +++ YA+KAN+N Sbjct: 74 DGYLYCEGVRVEDAMTAAER--SPFYLYSKPQILRNFAAYRDALQGLRSIIGYAVKANNN 131 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 V++ L LG G +VS ELR AL A R +F+G GKT++++ LA +SG++ NV Sbjct: 132 LPVLRVLRELGCGAVLVSGNELRLALQAGFDPARCIFNGNGKTLEDLKLAAESGVF-VNV 190 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +SE +L+ + + A + GKK P+ R+NPD++ H ++TG K KFGI ++ Sbjct: 191 DSEFDLENIVRAARATGKKVPVLLRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDS 250 Query: 185 ASTLPG-VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI- 242 + P +K+ GV H+GS I +++ F A L+ + ++R+ G ++++++GGGLGI Sbjct: 251 IKSYPNEIKLVGVHCHLGSTITKVDIFRDAAVLMVNYVDEIRAQGFKLEYLNIGGGLGID 310 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 +H+D P+ D + + + + +I+EPGR L+A+ V +V +K + K F+ Sbjct: 311 YHHTDAVLPTPMDLINTVRELVLSQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFI 370 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 ++D +M + +RP+LY AY I + P DIVGP+CE+ DF+ +R++ P Sbjct: 371 VVDGSMAELIRPSLYGAYQHIELVSPPTPGAEVATFDIVGPVCESADFLGKDRELPTPDE 430 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE-LDSIPA 418 G L + GAY + TYN +L PE V IR + ++ D +PA Sbjct: 431 GAGLVVHDAGAYCMSMASTYNLKLRPPEYWVEADGSIVKIRHGEKLDDYMKFFDGLPA 488 >gi|159896546|ref|YP_001542793.1| diaminopimelate decarboxylase [Herpetosiphon aurantiacus ATCC 23779] gi|159889585|gb|ABX02665.1| diaminopimelate decarboxylase [Herpetosiphon aurantiacus ATCC 23779] Length = 443 Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 111/420 (26%), Positives = 173/420 (41%), Gaps = 15/420 (3%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSNQA 66 L + L LA TP Y I + +S A G + + YA KA N Sbjct: 25 RLQIASCDLAALAAEYGTPLYLLDAETIRTIAMRYSAALRHAYGSNVSIHYASKALLNVG 84 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + + LG GLD+VS GEL A A +P + + G G E+ A+++GI V++ Sbjct: 85 VARLVHSLGLGLDVVSGGELAIAQRAGMPLDHVHLHGNGTPPAELAQAVEAGIGRIVVDN 144 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYAY 184 +LK L I R+ PD+ A H I TG KFG+P+ Sbjct: 145 LDQLKWLADYCAKRPTPQTILLRIAPDVTAGAHAHIRTGAASAKFGMPLDDGTAAEAVRL 204 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGGGLGIA 243 A PG+ + G+ HIGSQ+ + + L Q R + GGGL +A Sbjct: 205 ALQAPGLNLVGLHAHIGSQMRDWAALREMIGRLLAFADQQRRERSWLLTEFSPGGGLAVA 264 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVI-SIKK 295 Y + + YA+ I + I+EPGR LVA G+ + V Sbjct: 265 YMPNEQAGDIETYANTIANAVRLGCERYQIPLPRLIIEPGRSLVARAGVALYSVTGHKTV 324 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 ++ +D M D +RP+LY+A + + P + G CE+GD + Sbjct: 325 VGGSDYLHIDGGMGDNLRPSLYNAQYTAALVARPCA-PPIAPVQLAGRFCESGDVLIREV 383 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + G+L+ + GAY + YN ++++ Q +I+ R T+ +L+ D Sbjct: 384 ALPAAEVGELVAVPVAGAYTLSMASAYNGVPRPALVLLDRGQAMLIQRRETYADLMARDI 443 >gi|313127023|ref|YP_004037293.1| diaminopimelate decarboxylase [Halogeometricum borinquense DSM 11551] gi|312293388|gb|ADQ67848.1| diaminopimelate decarboxylase [Halogeometricum borinquense DSM 11551] Length = 441 Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 120/398 (30%), Positives = 193/398 (48%), Gaps = 4/398 (1%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +LA TP Y T +++N AF V YA+KA++ +AV++T+ G Sbjct: 47 RLARLADEYGTPLYVIDTDRVQENCARLQEAFSAE--EVRYAVKAHTGRAVLETVREAGL 104 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 + S GE+ RAL A I ++ V ++D + + R Sbjct: 105 AAECASAGEVERALNAGYEGSEIQYTAVNPPARDLDHVVDRWRDHPELTVTVGAADTADR 164 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G + R NP + A H+K+ T KFG+P + L + + Sbjct: 165 LRERGFDGRLCIRANPGVGAGHHEKVRT-GANAKFGVPYDDVPELAESIADDFDLVGLHA 223 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 G D + + + + + +LT+ + S +++ +DVGGG G+ Y +D P Sbjct: 224 HAGSGISGDDLSNHRELVRRMGELTRNVESRVGSLEFVDVGGGFGVPYRADEPPLDLDSV 283 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 A + G++ + +EPGR++VAD G+L+T+V ++K++ D T V +D M +RP + Sbjct: 284 ADATREALGDVSGTLAVEPGRYVVADAGVLLTRVNTVKEAPDATVVGVDAGMTTLLRPAM 343 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 YDAYHE V+ A D I A + GPICE+ D + NR +A PR G+LL + GAYG Sbjct: 344 YDAYHE-IRNVSAADDVEAISATVAGPICESADVMCENRLLAYPRRGNLLAVGNAGAYGY 402 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + TYNSR E+ ++G ++R R T +L EL+ Sbjct: 403 EMASTYNSRPRPAEVALSGGAARLVRRRETLTDLTELE 440 >gi|227542589|ref|ZP_03972638.1| diaminopimelate decarboxylase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181787|gb|EEI62759.1| diaminopimelate decarboxylase [Corynebacterium glucuronolyticum ATCC 51866] Length = 463 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 119/423 (28%), Positives = 190/423 (44%), Gaps = 19/423 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +GS+ V L LA TP + + AF + V YA KA +A+ Sbjct: 43 DGSVSIAGVGLPDLAREYGTPLFVVDEDDFRSRCQAMAAAFGAEN--VHYAAKAFLTKAI 100 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LD+ S GEL+ ALA PAERI G KT+ +D + SG+ +++ Sbjct: 101 ARWVNDEGLHLDVASLGELQVALATGFPAERITAHGNNKTVAYMDKIVSSGVGTVVLDAP 160 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ LN RA G + RV P I A+TH+ I+T ++ KFG + + A Sbjct: 161 GEIGLLNDRAALAGVTQNVMVRVKPGIEAHTHEMIATAHEDQKFGFSLASGSAYVACEKA 220 Query: 188 LP--GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAY 244 L + + G+ H+GSQ+ E F +A + + L + + +D+GGG GIAY Sbjct: 221 LDAVHLDLVGLHCHVGSQVFDAEGFSQAAERVLTLFVKLHDERRVTLTTLDLGGGFGIAY 280 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKV-----IS 292 + RP D A + +I++EPGR + + V +V + Sbjct: 281 TAHSRPLCVEDVAEDLIARVQRRCEKLNLDVPRIMVEPGRSIAGPTTVTVYEVGQVKDVH 340 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + + + +V +D M+D +RP LY A ++ +VN + I +VG CE+GD + Sbjct: 341 VTDTQTRRYVAVDGGMSDNLRPALYQAEYD-LRLVNRSASGAPIPTRVVGSHCESGDILI 399 Query: 353 LNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 N GDL+ TGAY S YN L + V + ++ R T ++++ Sbjct: 400 TNEAYPDDVATGDLVATAATGAYCYAMSSRYNMMLRPAVVSVKDGKARLMVKRETIEDVL 459 Query: 412 ELD 414 E Sbjct: 460 ENQ 462 >gi|296119501|ref|ZP_06838059.1| diaminopimelate decarboxylase [Corynebacterium ammoniagenes DSM 20306] gi|295967384|gb|EFG80651.1| diaminopimelate decarboxylase [Corynebacterium ammoniagenes DSM 20306] Length = 445 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 114/427 (26%), Positives = 188/427 (44%), Gaps = 20/427 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + V L ++A TP + + AF G + V YA KA ++ Sbjct: 20 EDGEVTIAGVPLSEIAEEFGTPVMVFDEDDFRSRCRDLAEAFGGPE-RVHYASKAFLSKR 78 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G LD+ S GEL+ ALAA PAER+ G K+ + + + + ++S Sbjct: 79 IARWVNEEGLALDVASLGELQIALAADFPAERMTVHGNNKSAKFLQACVDAKVGHVVIDS 138 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 EL+ L+ A P+ RV P ++A+TH+ I+T ++ KFGI + + A + Sbjct: 139 AQELELLDLIAAKAQHVQPVLIRVTPGVDAHTHEFIATSHEDQKFGISLATGEAFEAVKA 198 Query: 187 TLPGVKISGV--DMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIA 243 L ++ V H+GSQ+ E F A + + L Q G+ ++ ID+GGG GI Sbjct: 199 CLRAENLTLVGLHCHVGSQVFDAEGFKLAAERIMGLYSQIHDELGYTLKEIDLGGGYGIP 258 Query: 244 YHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKV------ 290 Y + + G +++EPGR LV + V +V Sbjct: 259 YTAHESALDIKAVSQDLLTAVANTADELGIEPPVVLVEPGRALVGAAAVTVYEVGVIKDV 318 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +V +D M+D +RP LY A ++ I+N D I + +VG CE+GD Sbjct: 319 TTGDSATPQRRYVAVDGGMSDNIRPALYGAEYD-ARIINRYTDGEEIPSRVVGSHCESGD 377 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + N + + GD L TGAY YN+ L + V + R T + Sbjct: 378 ILIDNIDLPNDVKAGDFLATPATGAYSYAMGSRYNAALRPAVVAVRAGAIKPMLRRETLE 437 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 438 DLLSLEV 444 >gi|293606250|ref|ZP_06688613.1| diaminopimelate decarboxylase [Achromobacter piechaudii ATCC 43553] gi|292815397|gb|EFF74515.1| diaminopimelate decarboxylase [Achromobacter piechaudii ATCC 43553] Length = 410 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 115/413 (27%), Positives = 181/413 (43%), Gaps = 27/413 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +LA TP + Y I + FD + YA KA SN +++ + G+ Sbjct: 8 LTQLATQHGTPLWVYDAAVIRERIAQLRR-FD----TIRYAQKACSNLHILRLMREEGAV 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA + G+ T D ID A + + + + R Sbjct: 63 VDAVSLGEIERSLAAGFDPKGE-PEGMVFTADLIDHATLDTVLRHGITVNAGSLDMLDRV 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP K +TG + K GI I + A K+ G+ Sbjct: 122 GQASPGHRVWLRINPGFGHGHSNKTNTGGPQSKHGIWIDDVAKAVAIVRRHGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + + + +RS H+I+ I GGGL I Y Y Sbjct: 181 MHIGSGV----DYGHLSSVCDAMVDVVRSLDHDIEAISAGGGLSIPYRDGEPRIDCDHYF 236 Query: 258 SLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ +EPGRFL+A+ G+LVT+V +I ++ F ++D ND Sbjct: 237 EQWDAARKRIEQFLSHPIRLEIEPGRFLIAEAGVLVTEVHAINHRPERDFALVDAGFNDL 296 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHAD---IVGPICETGDFIAL-------NRKIALPR 361 MRP +Y ++H I+ D + + GP+CE+GD ++ + PR Sbjct: 297 MRPAMYGSFHRISVHAPDGSDPSGVEQTRIAVAGPLCESGDVFTQEEGGVMSDQLLPQPR 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GD + + GAYG+ S YN+R L PE++++ Q +IR R T EL+ L+ Sbjct: 357 IGDFMVLHNAGAYGSSMSSNYNTRPLAPEVLLDQGQARLIRRRQTVAELLALE 409 >gi|297626227|ref|YP_003687990.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921992|emb|CBL56554.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 543 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 115/423 (27%), Positives = 190/423 (44%), Gaps = 19/423 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + + + +P Y + F +AFDG + V YA KA + + Sbjct: 122 GRVGVAGIDVVDAIEREGSPLYLFDEDDFRHRARDFKSAFDGWN--VYYAGKAMLTRTIA 179 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G G+D+ S GEL+ ALA + RI G KT DE+ LAL +G+ V+S Sbjct: 180 RLVMEEGLGMDVCSGGELQVALAGGMDPARIGMHGNNKTSDELALALSNGVGHIVVDSLD 239 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY--AS 186 E+ + Q A + RV P + A+TH+ I+T ++ KFG I ++ A Sbjct: 240 EIGRIEQLCRDNDWHARVMVRVTPGVEAHTHEYIATAHEDQKFGFSIANGQAMVAMVRCH 299 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAF-KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 P + + G+ HIGSQI F A + ++ +Q + G ++ +++GGG GIAY Sbjct: 300 YSPYMDLLGIHSHIGSQIFDTGGFEVAALRTMKLSSQFTDATGVHLPELNLGGGFGIAYT 359 Query: 246 SDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVT-----KVISI 293 S P + A+ + K+ +EPGR +V + + KV+ + Sbjct: 360 SADSPSTPDALATGLREIVEHEARAHSMAVPKMSIEPGRAIVGPTTMAIYTVGTVKVVDL 419 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + +V +D M+D +RP LY A + + N + + +VG CE GD + Sbjct: 420 DGGGQRVYVSVDGGMSDNIRPALYGAEY-SAVLANRTSSEPGVLSRVVGKHCEGGDILVR 478 Query: 354 NRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 + + PGDL+ + GAY + YN L P + V+ + + R T +L+ Sbjct: 479 DVFLPSDIEPGDLIAVPDMGAYSREMASNYNHALRPPVVRVHNGELSAMIRRETMDDLLS 538 Query: 413 LDS 415 LD Sbjct: 539 LDV 541 >gi|311107337|ref|YP_003980190.1| diaminopimelate decarboxylase [Achromobacter xylosoxidans A8] gi|310762026|gb|ADP17475.1| diaminopimelate decarboxylase 1 [Achromobacter xylosoxidans A8] Length = 411 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 115/413 (27%), Positives = 177/413 (42%), Gaps = 27/413 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +LA TP + Y I + FD + YA KA SN +++ + G+ Sbjct: 8 LTQLAAEHGTPLWVYDAAVIRERIAQLRR-FD----TIRYAQKACSNLHILRLMRAEGAV 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA + G+ T D ID A + + + + + R Sbjct: 63 VDAVSLGEIERSLAAGFQPQGE-PEGIVFTADLIDHATLAAVLKHGITVNAGSLDMLARV 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP K +TG + K GI I + A K+ G+ Sbjct: 122 GQASPGHRVWLRINPGFGHGHSNKTNTGGPQSKHGIWIGDVAEAMAIVRRHGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + + + + S H+I+ I GGGL I Y Y Sbjct: 181 MHIGSGV----DYAHLSSVCDAMVDVVASLDHDIEAISAGGGLSIPYREGDARIDCDHYF 236 Query: 258 SLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + ++ +EPGRFLVA+ G LV++V SI + ++ F ++D ND Sbjct: 237 EQWNAARQRIAERLGHEIRLEIEPGRFLVAEAGALVSEVHSINRRPERDFALVDAGFNDL 296 Query: 312 MRPTLYDAYHE---INYIVNPAGDRLHIHADIVGPICETGDFIALNR-------KIALPR 361 MRP +Y +YH + + GP+CE+GD + + PR Sbjct: 297 MRPAMYGSYHRISVHAPDGSQPQGAAETRIAVAGPLCESGDVFTQDAGGVVSDQLLPQPR 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GD L GAYG+ S YNSR L PE++++ +IR R T EL+ L+ Sbjct: 357 IGDFLVFHDAGAYGSSMSSNYNSRPLAPEVLLDNGAARLIRRRQTIGELLALE 409 >gi|317407679|gb|EFV87615.1| diaminopimelate decarboxylase [Achromobacter xylosoxidans C54] Length = 409 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 115/413 (27%), Positives = 179/413 (43%), Gaps = 26/413 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +LA TP + Y I + FD + YA KA SN +++ + G Sbjct: 8 LTQLAAEHGTPLWVYDAAVIRERIAQLRR-FDA----IRYAQKACSNLHILRLMRAEGVM 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA +GV T D ID A + + + + + +R Sbjct: 63 VDAVSLGEIERSLAAGFEPAGE-PAGVVFTADLIDHATLATVVKHGITVNAGSLDMLERV 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP K +TG + K GI I + + K+ G+ Sbjct: 122 GQHAPGHRVWLRINPGFGHGHSNKTNTGGPQSKHGIWIDDVAAAIGIVRRYGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + ++ + + + S H+I+ I GGGL I Y Y Sbjct: 181 MHIGSGV----NYGHLSSVCDAMVDVVASLDHDIEAISAGGGLSIPYREGEPRIDCDHYF 236 Query: 258 SLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + ++ +EPGRFLVA+ G LV +V +I + ++ F ++D ND Sbjct: 237 AQWDAARKRIEQRLGHEVRLEIEPGRFLVAEAGALVAEVHAINRRPERDFALVDAGFNDL 296 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHAD--IVGPICETGDFIALNR-------KIALPRP 362 MRP +Y +YH I+ + GP+CE+GD + + PR Sbjct: 297 MRPAMYGSYHRISVHAPDGATPPTAETRIAVAGPLCESGDVFTQDAGGVVSDQSLPRPRI 356 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD L GAYGA S YN+R L E+++N S+ +IR R T +L+ L+ Sbjct: 357 GDFLVFHNAGAYGASMSSNYNTRPLAAEVLLNRSETRLIRRRQTVADLLALEQ 409 >gi|46580970|ref|YP_011778.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|46450390|gb|AAS97038.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|311234658|gb|ADP87512.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris RCH1] Length = 421 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 109/404 (26%), Positives = 178/404 (44%), Gaps = 20/404 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +L +P Y YS + + V Y+ KANSN A++ + G + Sbjct: 21 TELVETYGSPLYVYSEAILRQRCREMKALSSHPGFRVNYSAKANSNLALLHIIREEGLVV 80 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D +S GEL L A ++I++ + +E+ A+ G+ Sbjct: 81 DAMSPGELFMNLRAGFSPDKILYVCNNVSAEELGNAVSHGLLVSVDSLS-----QLDLYG 135 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + R NP I A HKK+ T KE KFG+ + ++G++ Sbjct: 136 EVNPGGRVMVRFNPGIGAGHHKKVVTAGKETKFGVDPA-SIDEVRTILARHNLTLAGINQ 194 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGS + ES+ +A + L L ++ ++ ID GGG GI YH P A Sbjct: 195 HIGSLFLEPESYVEAARFLLTLAERFDD----VEVIDFGGGFGIPYHKYDNQPRLDLTAM 250 Query: 259 --------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + + ++EPGR++VA+ G+L+ V S+K + +V D+ N Sbjct: 251 GAQFDDLISGWAQRRGYRGRFLVEPGRYVVAECGLLLGSVHSVKSNGANRYVGTDLGFNV 310 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHI-HADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +YDA+H+I + +VG ICE+GD IA NR + GD+L + Sbjct: 311 LARPVMYDAHHDIEVYREDGAPSDLLLPQTVVGNICESGDIIARNRPLPPVEEGDILGVL 370 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 GAYG V S +YN R+ E++++ + ++R R T +L+ Sbjct: 371 DAGAYGYVMSSSYNQRMRPAEVLIDLEGRPRLVRRRETLDDLVA 414 >gi|170737760|ref|YP_001779020.1| diaminopimelate decarboxylase [Burkholderia cenocepacia MC0-3] gi|169819948|gb|ACA94530.1| diaminopimelate decarboxylase [Burkholderia cenocepacia MC0-3] Length = 412 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 130/415 (31%), Positives = 187/415 (45%), Gaps = 27/415 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + G+ Sbjct: 8 LAALAQQYGTPLWVYDADVIRDRIAQLRQ-FD----VIRYAQKANSNVHILKLMRDEGAC 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA GV T D ID + + V + + R Sbjct: 63 VDAVSLGEIERSLAAGFSPAGE-PEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARI 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP K +TG + K GI I + K+ G+ Sbjct: 122 GEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + ++ + + S GH+I I GGGL I Y Y Sbjct: 181 MHIGSGV----DYGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGELRVDVGHYF 236 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 S +I +EPGRFLVA+ G LVT+V ++ + FV++D ND Sbjct: 237 SQWDAARKRIERHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDL 296 Query: 312 MRPTLYDAYHEINYIVNPAG---DRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP++Y +YH ++ + G DR + I GP+CE+GD + RK+A P+ Sbjct: 297 MRPSMYGSYHAVSVHAHDGGLPADRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQ 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL++ GAYGA S YNSR L PE++V+ +IR R T EL+ L++ Sbjct: 357 IGDLLFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLALETF 411 >gi|262341097|ref|YP_003283952.1| diaminopimelate decarboxylase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272434|gb|ACY40342.1| diaminopimelate decarboxylase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 412 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 139/420 (33%), Positives = 200/420 (47%), Gaps = 22/420 (5%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYAL 59 M+ FK ++H E L +LA TP Y Y + I+K Y+ NAF + + ++ YA Sbjct: 1 MNEFKNMSSTVHRE--HLIQLAKKYGTPLYIYDSCKIKKQYIKMKNAFGKIKNFIINYAC 58 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN+N ++K L LGSGLD VS E+ L A ++I+F+ +I EI A+ G+ Sbjct: 59 KANTNLNILKFLQQLGSGLDTVSIQEVELGLKAGFHPKKIIFTPNCVSIQEIKKAVDFGV 118 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 + ++ I R+NP I A + KIS G + KFGI +QI Sbjct: 119 RINLDNLS-----ILEQFGEYYPNYSIGIRINPHIMAGGNSKISVGHIDSKFGISYYQIP 173 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + KI G MH GS I I+SF + K+L Q + N+ +ID G G Sbjct: 174 HMKRILKNTGL-KIEGFHMHTGSDISDIKSFLEGAKILF----QTAIDFPNLDYIDFGSG 228 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISI 293 + Y + + + + I + F N I EPG+FLV++ G + V I Sbjct: 229 FKVPYKKNDIKTNLTSLSHSITEKFKNFCQSYGSQIALIFEPGKFLVSESGYFLVHVNVI 288 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K + F +D N F+RP Y+AYH I I NP G +VG ICE+ D L Sbjct: 289 KHTTSTVFAGVDSGFNHFLRPMFYNAYHCIENISNPNGRFRF--YTVVGYICES-DTFGL 345 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 NRKI R GD+L ++ GAY S YNSR E+ + + +IR R T Q+L+ Sbjct: 346 NRKIQEIREGDILCMKNAGAYCFSMSSNYNSRYRPAEVFIFQGKDFLIRKRETMQDLLRN 405 >gi|224476531|ref|YP_002634137.1| putative diaminopimelate decarboxylase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421138|emb|CAL27952.1| putative diaminopimelate decarboxylase [Staphylococcus carnosus subsp. carnosus TM300] Length = 420 Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats. Identities = 117/424 (27%), Positives = 191/424 (45%), Gaps = 21/424 (4%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKAN 62 +Y G L SL+ +A TP Y I + AFD G+D + YA KA Sbjct: 4 EYKNGELTMGGTSLKMIAQSFGTPTIVYDEDQIRNQMRRYKEAFDKSGIDYNISYASKAF 63 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + ++K + G LD+VSEGEL AL A + I F G KT EI AL++ I F Sbjct: 64 TCIQMVKLVQEEGLDLDVVSEGELYTALEAGYDSSHIHFHGNNKTKHEIQYALENKIGYF 123 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ++S E++ +N+ A + RVNP + A+TH+ I TG+++ KFG+ I + Sbjct: 124 VIDSLEEIELINKYA---SDVVDVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLADK 180 Query: 183 A--YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 A ++ + + G+ HIGSQI+ ++ + ++ + + +++GGG Sbjct: 181 AIQNINSSKRLNLKGIHFHIGSQIEGTDAMIETSNIVIQWL---KGLNLEVDLLNIGGGF 237 Query: 241 GIAY------HSDHRPPSSSDYASLIHQYFGNLQCKII-LEPGRFLVADVGILVTKVISI 293 GI Y YA + I +EPGR +V + G+ + +V +I Sbjct: 238 GIHYVEGDVSFPIETGIKEITYALKDVAKNNDYPLPTIGIEPGRSIVGEAGVTLYEVGTI 297 Query: 294 KKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K+ +D M+D +R LY A ++ + + + I G +CE+GD IA Sbjct: 298 KEIPGVNKYVSIDGGMSDHIRTALYGAKYDALLVNR--EEPANDTVTISGKLCESGDIIA 355 Query: 353 LNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + K+ GD L I TGAY + YN + + + R + ++LI Sbjct: 356 RDVKLPESVHRGDYLAILSTGAYHYSMASNYNQMQKPSVFFIKDGKAREVIKRQSLRQLI 415 Query: 412 ELDS 415 D+ Sbjct: 416 INDT 419 >gi|195624020|gb|ACG33840.1| diaminopimelate decarboxylase [Zea mays] gi|224030925|gb|ACN34538.1| unknown [Zea mays] Length = 486 Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats. Identities = 139/416 (33%), Positives = 232/416 (55%), Gaps = 6/416 (1%) Query: 8 EGSLHAENVSLEK-LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L+ E V +E +A ++PFY YS I +N+ + +A G+ ++V YA+KAN+N Sbjct: 72 DGYLYCEGVRVEDAMAAAERSPFYLYSKLQILRNFAAYRDALQGLRSIVGYAVKANNNLP 131 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ L LG G +VS ELR AL A R +F+G GKT++++ LA +SG++ NV+S Sbjct: 132 VLRVLRELGCGAVLVSGNELRLALQAGFDPARCIFNGNGKTLEDLKLAAESGVF-VNVDS 190 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E +L+ + + A + GKK P+ R+NPD++ H ++TG K KFGI ++ Sbjct: 191 EFDLENIVRAARATGKKVPVLLRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLNSIK 250 Query: 187 -TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-AY 244 +K+ GV H+GS I +++ F A L+ + ++R+ G ++++++GGGLGI + Sbjct: 251 SYSNEIKLVGVHCHLGSTITKVDIFRDAAVLMVNYVDEIRAQGFKLEYLNIGGGLGIDYH 310 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 H+D P+ D + + + + +I+EPGR L+A+ V +V +K + K F+++ Sbjct: 311 HTDAVLPTPMDLINTVRELVLSQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVV 370 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D +M + +RP+LY AY I + P DIVGP+CE+ DF+ +R++ P G Sbjct: 371 DGSMAELIRPSLYGAYQHIELVSPPTPGAEVATFDIVGPVCESADFLGKDRELPTPDEGA 430 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE-LDSIPA 418 L + GAY + TYN +L PE V IR + ++ D +PA Sbjct: 431 GLVVHDAGAYCMSMASTYNLKLRPPEYWVEEDGSIVKIRHEEKLDDYMKFFDGLPA 486 >gi|194689552|gb|ACF78860.1| unknown [Zea mays] Length = 439 Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats. Identities = 139/416 (33%), Positives = 232/416 (55%), Gaps = 6/416 (1%) Query: 8 EGSLHAENVSLEK-LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L+ E V +E +A ++PFY YS I +N+ + +A G+ ++V YA+KAN+N Sbjct: 25 DGYLYCEGVRVEDAMAAAERSPFYLYSKLQILRNFAAYRDALQGLRSIVGYAVKANNNLP 84 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ L LG G +VS ELR AL A R +F+G GKT++++ LA +SG++ NV+S Sbjct: 85 VLRVLRELGCGAVLVSGNELRLALQAGFDPARCIFNGNGKTLEDLKLAAESGVF-VNVDS 143 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E +L+ + + A + GKK P+ R+NPD++ H ++TG K KFGI ++ Sbjct: 144 EFDLENIVRAARATGKKVPVLLRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLNSIK 203 Query: 187 -TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-AY 244 +K+ GV H+GS I +++ F A L+ + ++R+ G ++++++GGGLGI + Sbjct: 204 SYSNEIKLVGVHCHLGSTITKVDIFRDAAVLMVNYVDEIRAQGFKLEYLNIGGGLGIDYH 263 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 H+D P+ D + + + + +I+EPGR L+A+ V +V +K + K F+++ Sbjct: 264 HTDAVLPTPMDLINTVRELVLSQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVV 323 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D +M + +RP+LY AY I + P DIVGP+CE+ DF+ +R++ P G Sbjct: 324 DGSMAELIRPSLYGAYQHIELVSPPTPGAEVATFDIVGPVCESADFLGKDRELPTPDEGA 383 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE-LDSIPA 418 L + GAY + TYN +L PE V IR + ++ D +PA Sbjct: 384 GLVVHDAGAYCMSMASTYNLKLRPPEYWVEEDGSIVKIRHEEKLDDYMKFFDGLPA 439 >gi|187921716|ref|YP_001890748.1| diaminopimelate decarboxylase [Burkholderia phytofirmans PsJN] gi|187720154|gb|ACD21377.1| diaminopimelate decarboxylase [Burkholderia phytofirmans PsJN] Length = 413 Score = 238 bits (608), Expect = 9e-61, Method: Composition-based stats. Identities = 114/412 (27%), Positives = 182/412 (44%), Gaps = 25/412 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +LAH TP + Y I + + FD ++ YA KA SN ++K + G+ Sbjct: 8 LVELAHEHGTPLWVYDADTIRRRIAELRS-FD----VIRYAQKACSNLHILKLMRDEGAM 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE++R+LAA + V L + I + L L Q Sbjct: 63 VDAVSLGEIKRSLAAGFKPDGDPEGVVFTADLIDHATLATVIEHRITVNAGSLDMLEQIG 122 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + R+NP K +TG + K GI + + +K+ G+ Sbjct: 123 RHAPEGHRVWLRINPGFGHGHSNKTNTGGEHSKHGIWLDDVPRAVELVRRY-RLKLVGLH 181 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + ++ + + ++ GH+I+ I GGGL + Y + Y Sbjct: 182 MHIGSGV----DYGHLSRVCEAMVEAVKGLGHDIEAISAGGGLSVPYREGEPDIDVAHYF 237 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 L + ++ +EPGRFLVA G+LV +V ++ + + F +LD ND Sbjct: 238 RLWDAARRQIETHVGHRVRLEIEPGRFLVAQSGVLVAEVHALNRRPAQQFALLDAGFNDL 297 Query: 312 MRPTLYDAYHEINYIVNPA--GDRLHIHADIVGPICETGDFIAL-------NRKIALPRP 362 +RP+ Y ++HE+ + + + GP+CE GD NR I P Sbjct: 298 VRPSFYGSHHEMTVLRRDGALSEAPIDSFAVAGPLCEAGDVFTQAESGVITNRSIHTPEV 357 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GD + GAYGA S YNSR L PE++++ + +IR R T EL+ L+ Sbjct: 358 GDFIVFHDAGAYGASMSSNYNSRPLAPEVLLDHGKPRLIRRRQTIDELLALE 409 >gi|58617276|ref|YP_196475.1| diaminopimelate decarboxylase [Ehrlichia ruminantium str. Gardel] gi|58416888|emb|CAI28001.1| Diaminopimelate decarboxylase [Ehrlichia ruminantium str. Gardel] Length = 424 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 165/414 (39%), Positives = 247/414 (59%), Gaps = 5/414 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y L+ ENVS+ + + + TP YCYS AI+ NY+ F ++++CYA+K+N Sbjct: 12 FFHYKSNVLNIENVSVLDITNSIGTPVYCYSLNAIKNNYIQFKENLP-NNSIICYAVKSN 70 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN +++ L+ LGSG D VSEGE+RRA+ A + +IVFSGVGKT EI AL + I Sbjct: 71 SNLSILSLLSSLGSGADAVSEGEIRRAITAGISPNKIVFSGVGKTEQEISFALDNRILQL 130 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL+ +N+ + AP++ R+NP+INANT+ KI+TG K +KFGIP + ++ Sbjct: 131 NVESIEELQLINKISYHKNIIAPVSIRINPNINANTNDKITTGLKVNKFGIPEESLDQVF 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +L +KI G+ +HIGSQI + F ++ + + + +I +D+GGGLGI Sbjct: 191 NS--SLTNIKIIGISVHIGSQIANLGIFQNTIDKVKRIVKIFEQHNIHILRVDMGGGLGI 248 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + P+ +Y +L+ F II EPGR +V + GIL+ KV+ K + +K + Sbjct: 249 PYKNSDIFPTIQEYTNLLKNNFEKESYNIICEPGRAIVGNTGILLAKVLYHKSNYEKNHL 308 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +LD MND +RP LY+A E I + H+ DIVGPICE+ D A + I Sbjct: 309 VLDTGMNDLIRPALYNA--EHTIIPAVVSSKSHLSFDIVGPICESDDTFAHSYWINNVDN 366 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +++ I GAYG+ S YNSR L+PE++VN +HIIR R T+ ++++ + I Sbjct: 367 NEIVAICTVGAYGSSMSSNYNSRPLVPEVIVNKDNYHIIRHRQTYNDMLKDEII 420 >gi|226307348|ref|YP_002767308.1| diaminopimelate decarboxylase [Rhodococcus erythropolis PR4] gi|226186465|dbj|BAH34569.1| probable diaminopimelate decarboxylase [Rhodococcus erythropolis PR4] Length = 447 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 118/419 (28%), Positives = 192/419 (45%), Gaps = 18/419 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + +VSLE++A TP Y + T+ F D+ + YA KA +A+ Sbjct: 33 GRVCIGDVSLEEIADQYGTPTYVVDEADVRHRCRTYREIFP--DSEIVYAGKALMIRAMA 90 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 ++ G G+D+ S GEL ALAA V RI+ G K++ E+ A+ +G+ ++S S Sbjct: 91 TWVSDEGLGVDVCSAGELAVALAAGVDPHRIILHGNAKSVSELRAAVNAGVGRIVLDSPS 150 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYAS 186 E L + + RV P I+ + HK +STG + KFG+P + + Sbjct: 151 EAVRLA---SVCTHRQKVLIRVTPGIDIHGHKAVSTGILDQKFGLPAFSEELERTVSVVA 207 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYH 245 +++ G+ H+GSQI E F A + + +R + +D+GGG GIAY Sbjct: 208 NAAHLQLIGLHCHLGSQITDPELFRPAIETMIAQMDDIRRTHRIILTELDLGGGHGIAYM 267 Query: 246 SDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS-IKKSA 297 + A + +I+LEPGR + A G+ + +V + S Sbjct: 268 PGDAQLDLTRLAHVIDETLDDACTRNRFPRPEIVLEPGRAIAARAGVTLYRVQNIKSISG 327 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 +TFV +D M+D R +LYD++++ +VN + G CE+GD IA+ ++ Sbjct: 328 GRTFVSVDGGMSDNPRVSLYDSHYD-VELVNRHSSAPLQEVTVAGRHCESGDEIAVGARL 386 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GDLL + TGAY + TYNS P + V G + R + +L+ + Sbjct: 387 PADLHEGDLLAVPCTGAYHHSMASTYNSVGRPPVVAVLGGIARPLIRRESINDLLAREV 445 >gi|206563916|ref|YP_002234679.1| diaminopimelate decarboxylase [Burkholderia cenocepacia J2315] gi|198039956|emb|CAR55934.1| putative diaminopimelate decarboxylase [Burkholderia cenocepacia J2315] Length = 412 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 128/415 (30%), Positives = 183/415 (44%), Gaps = 27/415 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + G+ Sbjct: 8 LATLAQQYGTPLWVYDADVIRDRIAQLRQ-FD----VIRYAQKANSNVHILKLMREEGAC 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA GV T D ID + + V + + R Sbjct: 63 VDAVSLGEIERSLAAGFSPAGE-PEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARI 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP K +TG + K GI I + K+ G+ Sbjct: 122 GEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + ++ + + S GH+I I GGGL I Y Y Sbjct: 181 MHIGSGV----DYGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYF 236 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 S +I +EPGRFLVA+ G LVT+V ++ + FV++D ND Sbjct: 237 SQWDAARKRIERHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDL 296 Query: 312 MRPTLYDAYHE---INYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP++Y +YH + R + I GP+CE+GD + RK+A P+ Sbjct: 297 MRPSMYGSYHAVSVHAHDGALPAGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQ 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL++ GAYGA S YNSR L PE++V+ +IR R T EL+ L++ Sbjct: 357 IGDLLFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLALETF 411 >gi|124005272|ref|ZP_01690113.1| diaminopimelate decarboxylase [Microscilla marina ATCC 23134] gi|123989094|gb|EAY28672.1| diaminopimelate decarboxylase [Microscilla marina ATCC 23134] Length = 420 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 107/421 (25%), Positives = 177/421 (42%), Gaps = 18/421 (4%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 + E + + + + +A TP Y Y I F F ++ + YA KA + Sbjct: 1 MQRTENEYYIQRLRVTDIARQFGTPVYVYDADHILGQIARFREGFSTVNLQIKYACKALT 60 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N ++K + G GLD VS E+R LAA ++IVF+ I+E+ A++ G+ Sbjct: 61 NINIMKLMLSQGLGLDTVSLSEVRMGLAAGFVPQQIVFTPNCVGIEELIEAVELGVKINI 120 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 + K + + + + NA+ K FGI + Q+ + A Sbjct: 121 ENLSNLEKFAQRYGSQVPVCIRLNPHIATQQNADKVNWWHNQSK---FGISMDQLAQVKA 177 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +T + I + + F + N++ ID GGG+ + Sbjct: 178 IETTY-----NLPINGIHIHSSSVIMTPEVFLQGAQTVFDIALGFQNLEFIDFGGGIKVD 232 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSA 297 + + F K EPGRFLV + G L+T+ K++ Sbjct: 233 VGDGQEVIDVVELGQKLDPVFQQFCQKYGHTLELWFEPGRFLVGNSGTLLTECKVCKRNG 292 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 FV +D N +RP +YDAYH+I + NP G +VG +CE D + +R + Sbjct: 293 GTDFVGVDSGFNHLIRPMMYDAYHQIVNVSNPQG--TQKKYTVVGNVCE-IDNLGKDRML 349 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS-I 416 A R GDL+ ++ GAYG + TYNSR E++V + +IR R T+++L+ + Sbjct: 350 AEVREGDLIALKSAGAYGYSMASTYNSRFRPAEVLVLNGEAKLIRKRDTYEDLMRNQVDL 409 Query: 417 P 417 P Sbjct: 410 P 410 >gi|262201840|ref|YP_003273048.1| diaminopimelate decarboxylase [Gordonia bronchialis DSM 43247] gi|262085187|gb|ACY21155.1| diaminopimelate decarboxylase [Gordonia bronchialis DSM 43247] Length = 473 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 111/428 (25%), Positives = 185/428 (43%), Gaps = 22/428 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G L V + +LA TP + +AF G V YA KA V Sbjct: 46 DGELEIAGVGVSELADKYGTPVFLVDEADFRSRCADMMSAF-GPYGRVHYASKAFLCTEV 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LD+ S GEL AL A P ERI G K++ E+ AL +G+ ++S Sbjct: 105 ARWVNEEGLSLDVCSGGELAIALRAGFPPERIALHGNNKSVAELTAALDAGVGHVVLDSF 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AYA 185 E++ L+ A G A + RV + A+TH+ IST ++ KFG + ++ Sbjct: 165 VEIERLDALAGERGVVADVLVRVTVGVEAHTHEFISTAHEDQKFGFALAGGVAMDAVRRV 224 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKL-----LRDLTQQLRSNGHNIQHIDVGGGL 240 +++ G+ HIGSQI ++ F A + + + +D+GGGL Sbjct: 225 FATDNLRLVGLHSHIGSQIFDMDGFELAAHRVLGLLHDVVAEFGVDKTAQMSIVDLGGGL 284 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISI 293 GI+Y + RP A + + I +EPGR + + + +V +I Sbjct: 285 GISYLPEERPLPVGTVAEKLAEIVRRESSAVGLPMPTIAVEPGRAIAGPGTVTLYRVGTI 344 Query: 294 KKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 K A + +V +D M+D +R LY A +++ + + R + + +VG CE+G Sbjct: 345 KDVALGGGSVRRYVSVDGGMSDNIRTVLYQAEYDVRLVSRVSTARA-VVSRVVGKHCESG 403 Query: 349 DFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + + PGDL+ + TGAY S YN + P + + ++ R Sbjct: 404 DIVIKDCWLPEDLEPGDLIAVAATGAYCYSMSSRYNMAMRPPVVAIADGADRMLLRRENI 463 Query: 408 QELIELDS 415 + L+ Sbjct: 464 DDFFSLEV 471 >gi|221633687|ref|YP_002522913.1| diaminopimelate decarboxylase [Thermomicrobium roseum DSM 5159] gi|221156044|gb|ACM05171.1| diaminopimelate decarboxylase [Thermomicrobium roseum DSM 5159] Length = 449 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 116/419 (27%), Positives = 185/419 (44%), Gaps = 13/419 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQA 66 G L V L +LA TP Y Y I + + + + YA KA + Sbjct: 22 GQLWTGGVPLPRLAEQYGTPLYLYDVATIRAAIAAYRHGLESYPGETALVYAAKAFAAVG 81 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ LA G G+D VSEGEL A AA VPAER+V G K+ +E+ AL+ G+ V++ Sbjct: 82 LLRLLASEGLGVDCVSEGELALARAAGVPAERLVLHGNNKSEEELRFALELGVGRIVVDN 141 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINAN-THKKISTGKKEDKFGIPIHQIHSLYAYA 185 EL+ L A S GK PI R+NP + + TH TG+ + KFG+PI + A A Sbjct: 142 HDELERLVAIARSTGKTVPILLRLNPGVEPHDTHAYRRTGQLDSKFGLPIVTGDAEAAVA 201 Query: 186 STLPGVKIS--GVDMHIGSQIDQIESFHKA-FKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 L +++ G +HIGSQ+ + + +A ++ + R +++ GGG GI Sbjct: 202 RCLSTPELALLGFHVHIGSQLFDLIPYQRAIEQVFAFAGELSRRFAFSLREFSPGGGFGI 261 Query: 243 AYHSDHRPP-------SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y ++ S + + G +++LEPGR LV G+ + +V S+K+ Sbjct: 262 PYTTEDPVLDLAEATAQVSRWVAEAASMAGLPLPRLVLEPGRSLVGRAGMALYRVGSVKR 321 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + V DR +VG CE+GD + + Sbjct: 322 LPGIRTYVAVDGGMADNIRPALYGARYLALPVIERADRRRERVTLVGKYCESGDVLVRDA 381 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + P PGDL+ I GAY + YN + + + + + R T +L+ + Sbjct: 382 VLPEPVPGDLVAIPVAGAYCLAMASNYNLARRPVVVALEAGRVELWQRRETIADLLARE 440 >gi|332662084|ref|YP_004444872.1| diaminopimelate decarboxylase [Haliscomenobacter hydrossis DSM 1100] gi|332330898|gb|AEE47999.1| diaminopimelate decarboxylase [Haliscomenobacter hydrossis DSM 1100] Length = 409 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 108/415 (26%), Positives = 180/415 (43%), Gaps = 12/415 (2%) Query: 4 FKYFEGS-LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 K+ G L + ++ KL +P Y Y IE+ Y AF + YA KA Sbjct: 1 MKFENGHYLLSGGINPLKLVEKYGSPLYVYEAETIERQYQRLKAAFQVEKLKISYACKAL 60 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 +N +++K + LGS +D VS E++ AL A ++++ G EI+ A+ G+ Sbjct: 61 TNISILKFIKQLGSTIDCVSIQEVQMALRAGFAPVDVLYTPSGVHFSEIEEAVALGVRIN 120 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ++ + PI R+NP I A + K S G + KFGI Q+ + Sbjct: 121 LDNIP-----AIEKFGEIYPHIPICVRINPHIMAGGNLKTSVGHIDSKFGISYQQMPLV- 174 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 G+K+ G+ MH GS I ++F ++ +L + + Sbjct: 175 QGILETTGMKLEGLHMHTGSDILNPDAFIAGADVMLNLAKDYPDLDYIDFGSGFKVPYKP 234 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQC--KIILEPGRFLVADVGILVTKVISIKKSADKT 300 + ++ + + ++ EPG+FLV++ G + V +K Sbjct: 235 NDLETNIEELGEKLSAKFNTFCQEYGRAITMVFEPGKFLVSEAGSFLVTVNVVKHGVTTV 294 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F +D +N +RP YDAYH I+ + N + ++VG ICET D A R+I Sbjct: 295 FAGVDSGLNHLIRPMFYDAYHRISNLSN--PEGKTQTYNVVGYICET-DTFATKREIPEI 351 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGD+L + GAY + YNSRL E+++ + +IR R T ++L + Sbjct: 352 APGDVLCMHNAGAYCYSMASNYNSRLRPAEVLIYQGKDFLIRERETIEDLFKHQI 406 >gi|227487947|ref|ZP_03918263.1| diaminopimelate decarboxylase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092038|gb|EEI27350.1| diaminopimelate decarboxylase [Corynebacterium glucuronolyticum ATCC 51867] Length = 463 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 119/423 (28%), Positives = 190/423 (44%), Gaps = 19/423 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +GS+ V L LA TP + + AF + V YA KA +A+ Sbjct: 43 DGSVSIAGVGLPDLAREYGTPLFVVDEDDFRSRCQAMAAAFGAEN--VHYAAKAFLTKAI 100 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LD+ S GEL+ ALA PAERI G KT+ +D + SG+ +++ Sbjct: 101 ARWVNDEGLHLDVASLGELQVALATGFPAERITAHGNNKTVAYMDKVVSSGVGTVVLDAP 160 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ LN RA G + RV P I A+TH+ I+T ++ KFG + + A Sbjct: 161 GEIGLLNDRAALAGVTQNVMVRVKPGIEAHTHEMIATAHEDQKFGFSLASGSAYAACEKA 220 Query: 188 LP--GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAY 244 L + + G+ H+GSQ+ E F +A + + L + + +D+GGG GIAY Sbjct: 221 LDAVHLDLVGLHCHVGSQVFDAEGFSQAAERVLTLFVKLHDERRVTLTTLDLGGGFGIAY 280 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKV-----IS 292 + RP D A + +I++EPGR + + V +V + Sbjct: 281 TAHSRPLRVEDVAEDLIARVQRRCEKLNLDVPRIMVEPGRSIAGPTTVTVYEVGQVKDVH 340 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + + + +V +D M+D +RP LY A ++ +VN + I +VG CE+GD + Sbjct: 341 VTDTQTRRYVAVDGGMSDNLRPALYQAEYD-LRLVNRSASGAPIPTRVVGSHCESGDILI 399 Query: 353 LNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 N GDL+ TGAY S YN L + V + ++ R T ++++ Sbjct: 400 TNEAYPEDVATGDLVATAATGAYCYAMSSRYNMMLRPAVVSVKDGKARLMVKRETIEDVL 459 Query: 412 ELD 414 E Sbjct: 460 ENQ 462 >gi|107025839|ref|YP_623350.1| diaminopimelate decarboxylase [Burkholderia cenocepacia AU 1054] gi|116692977|ref|YP_838510.1| diaminopimelate decarboxylase [Burkholderia cenocepacia HI2424] gi|105895213|gb|ABF78377.1| diaminopimelate decarboxylase [Burkholderia cenocepacia AU 1054] gi|116650977|gb|ABK11617.1| diaminopimelate decarboxylase [Burkholderia cenocepacia HI2424] Length = 412 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 127/415 (30%), Positives = 183/415 (44%), Gaps = 27/415 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + G+ Sbjct: 8 LAALAQQYGTPLWVYDADVIRDRIAQLRQ-FD----VIRYAQKANSNVHILKLMRDEGAC 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA GV T D ID + + V + + R Sbjct: 63 VDAVSLGEIERSLAAGFSPSGE-PEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARI 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP K +TG + K GI I + K+ G+ Sbjct: 122 GEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + ++ + + S GH+I I GGGL I Y Y Sbjct: 181 MHIGSGV----DYGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYF 236 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + +I +EPGRFLVA+ G LVT+V ++ + FV++D ND Sbjct: 237 NQWDAARKRIERHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDL 296 Query: 312 MRPTLYDAYHE---INYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP++Y +YH + R + I GP+CE+GD + RK+A P+ Sbjct: 297 MRPSMYGSYHAVSVHAHDGALPAGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQ 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL++ GAYGA S YNSR L PE++V+ +IR R T EL+ L++ Sbjct: 357 IGDLLFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLALETF 411 >gi|255280715|ref|ZP_05345270.1| diaminopimelate decarboxylase [Bryantella formatexigens DSM 14469] gi|255268652|gb|EET61857.1| diaminopimelate decarboxylase [Bryantella formatexigens DSM 14469] Length = 422 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 109/411 (26%), Positives = 177/411 (43%), Gaps = 20/411 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 E + +LA QTP Y Y+ + + N +V Y+ KANSN A ++ + Sbjct: 14 FFEGHNPVELAKEYQTPLYVYNERILRQRCRDLKNMVTYPKFVVDYSAKANSNLAFLQVV 73 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G +D +S GE+ AA E I + G + +E+ A+ +G+ Sbjct: 74 KSEGLEVDAMSPGEIYVERAAGFAPEEIFYIGNNVSAEEMQYAIDAGVRVSVDSLS---- 129 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 ++ L +A R NP + A H+K+ T K+ KFGI I + Sbjct: 130 -QLEQFGQLAPGGEVAIRFNPGVGAGHHEKVITAGKKTKFGIEPKYIPQIRELLE----- 183 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 K + I I + +AF ++ ++ ID+GGG GI Y + Sbjct: 184 KYHLKLVGINQHIGSLFMTGEAFTASIAALLEIAKQFPELEFIDMGGGFGIPYKKEEDQA 243 Query: 252 S--------SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + D A + +EPGR++ A+ +++++V S+K + DK FV Sbjct: 244 PLDLKGLGAAIDEALWKFTREYGREVTFRIEPGRYISAECSVILSEVHSVKHNNDKKFVG 303 Query: 304 LDVAMNDFMRPTLYDAYHEI-NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 D N RP +YD+YH I Y + +VG ICE+GD +A +R + Sbjct: 304 CDCGFNVLQRPIMYDSYHGIEVYRGSEVKSEKTEPVTVVGNICESGDILAKDRVLPEIFK 363 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GD+L I GAYG + YN+RL E+M+ + +IR R ++L+ Sbjct: 364 GDILGILDAGAYGFTMASNYNNRLRPAEVMLRENGEVVLIREREELEDLLR 414 >gi|225022820|ref|ZP_03712012.1| hypothetical protein CORMATOL_02865 [Corynebacterium matruchotii ATCC 33806] gi|224944427|gb|EEG25636.1| hypothetical protein CORMATOL_02865 [Corynebacterium matruchotii ATCC 33806] Length = 452 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 115/428 (26%), Positives = 186/428 (43%), Gaps = 22/428 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + VSL +A TP + AF G + V YA KA Sbjct: 26 RDGDVSIAGVSLPSIAKEYGTPVMVVDEIDFRSRCRDMARAFGGPEH-VHYASKAFMTSR 84 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ + G LDI S GEL AL A PAERI G K + + G+ ++S Sbjct: 85 IVQWVNEEGLSLDIASHGELLVALHAGFPAERIAAHGNNKDAAFLRDCVSKGVGFVILDS 144 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAY 184 E++ L+ A LG+ + RV P I+A+TH+ IST ++ KFG + Sbjct: 145 HQEIEDLHAIATELGRTQDVLIRVKPGIDAHTHEFISTAHEDQKFGFSLASGSALKAARR 204 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV---GGGLG 241 LP +++ G+ H+GSQ+ E F A + + L + + + ++ GGG G Sbjct: 205 VVELPNLRLIGLHCHVGSQVFDAEGFSLAAERILKLYRTIIEECEVGEEFNILNLGGGYG 264 Query: 242 IAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 IAY +P + + I +EPGR + + V V ++K Sbjct: 265 IAYVEGEQPLDVEAVSTDLLQRVNTYAERLHLTMPFIKVEPGRAIAGPSTVTVYTVGTVK 324 Query: 295 KSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + ++ +D M D +RP LY A ++ +VN + D I +VG CE+GD Sbjct: 325 DVTIDGGKTRRYISVDGGMGDNIRPALYGAEYD-IRLVNRSTDAPLIPTRVVGSHCESGD 383 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN--GSQFHIIRPRMT 406 + +R + RPGD++ + TGAY S YN + + V + H++ R T Sbjct: 384 ILINDRNLPEDIRPGDIVALAATGAYCYSMSSRYNMMMRPAIVSVGAADDKAHLMVRRET 443 Query: 407 FQELIELD 414 ++ L+ Sbjct: 444 LEDFFNLE 451 >gi|300933604|ref|ZP_07148860.1| hypothetical protein CresD4_05997 [Corynebacterium resistens DSM 45100] Length = 473 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 116/437 (26%), Positives = 205/437 (46%), Gaps = 28/437 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G++ V L +A TP + + +NAF G V YA KA + + Sbjct: 39 KGAVSIAGVDLADIAAEYGTPAFVINEDDFRARCRALANAFGG-GERVHYASKAFLTKTI 97 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LDI S GEL+ ALAA PA+RI G K++D + A++SG+ ++SE Sbjct: 98 ARWVAEEGLALDIASHGELQVALAADFPADRITIHGNNKSLDFLQFAVESGVELIVIDSE 157 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ L++ LG+ + RV P ++ +TH+ I+T ++ KFG + + A + Sbjct: 158 QEIARLSEVCGQLGQTQDVLIRVTPGVHVDTHEFIATSHEDQKFGFSLSSGTAYRAAVAA 217 Query: 188 LPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV--------- 236 ++ G+ H+GSQ+ + F A + L L +L ++ +++ D Sbjct: 218 ATARGLRLRGLHCHVGSQVFEASGFALAAERLLGLWAKLLNDLPDLEGFDDTSLANFNVL 277 Query: 237 --GGGLGIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILV 287 GGG GIAY D + AS + + + + +EPGR + + + Sbjct: 278 DLGGGYGIAYMPDQEALDVDEVASDLKEKVAKAAKTAGVPKPVLNVEPGRAIAGPSTVTL 337 Query: 288 TKV-----ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVG 342 +V + + + A + ++ +D M+D +RP LY+A ++ N I IVG Sbjct: 338 YRVGTVKDVDVSEHATRRYLSVDGGMSDNIRPALYEAEYDCRV-ANREVQGEMIPTRIVG 396 Query: 343 PICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHII 401 CE+GD + + + + GDL+ + TGAY + YN P I+V+ Q ++ Sbjct: 397 SHCESGDILVNDALVPDDVQAGDLVMLGATGAYCFSMASRYNMMTRPPVIVVSEGQHRVM 456 Query: 402 RPRMTFQELIELDSIPA 418 R T ++++ L+ P+ Sbjct: 457 VRRETIEDVLALEVDPS 473 >gi|15827559|ref|NP_301822.1| diaminopimelate decarboxylase [Mycobacterium leprae TN] gi|221230036|ref|YP_002503452.1| diaminopimelate decarboxylase [Mycobacterium leprae Br4923] gi|13626268|sp|Q50140|DCDA_MYCLE RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|13093109|emb|CAC31509.1| diaminopimelate decarboxylase [Mycobacterium leprae] gi|219933143|emb|CAR71223.1| diaminopimelate decarboxylase [Mycobacterium leprae Br4923] Length = 472 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 114/427 (26%), Positives = 187/427 (43%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L LA TP + + AF G V YA KA + Sbjct: 47 GVACIAGNKLTDLAGEYGTPLFVIDEDDFRFRCREIAAAFGG-GENVHYAAKAFLCTEIA 105 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G LD+ S GEL AL A P ERI G K++ E+ A+++G+ ++S + Sbjct: 106 RWIDEEGLSLDVCSGGELAVALHASFPPERISLHGNNKSVAELKDAVKAGVGYIVLDSTT 165 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYAS 186 E++ L+ A G + R+ + A+TH+ I+T ++ KFG+ + ++ Sbjct: 166 EIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFIATAHEDQKFGLSVASGAAMAAVRRVF 225 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKL-----LRDLTQQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI + F A + + + +D+GGGLG Sbjct: 226 ATDNLRLVGLHSHIGSQIFDVAGFELAAHRVIGLLCDIVGEFDPEKTAQLSIVDLGGGLG 285 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y D PP + A S G K+++EPGR + I + +V Sbjct: 286 ISYLPDDDPPPIFELAAKLGAIVSNESAAVGLPVPKLMVEPGRAIAGPGTITLYEVGTIK 345 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D M+D +R LYDA +++ + D A IVG CE+GD Sbjct: 346 DVDVSATAHRRYVSIDGGMSDNIRTALYDAQYDVRLVSR-TSDAPAAPASIVGKHCESGD 404 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + + +PGDL+ + TGAY S YN + V Q +I R T Sbjct: 405 IVVRDTWVPDDLKPGDLVGVAATGAYCYSLSSRYNMLGRPAVVAVCAGQARLILRRETVD 464 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 465 DLLSLEV 471 >gi|7436508|pir||T09993 diaminopimelate decarboxylase (EC 4.1.1.20) - Mycobacterium leprae gi|699341|gb|AAA63102.1| lysA [Mycobacterium leprae] Length = 495 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 114/427 (26%), Positives = 187/427 (43%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L LA TP + + AF G V YA KA + Sbjct: 70 GVACIAGNKLTDLAGEYGTPLFVIDEDDFRFRCREIAAAFGG-GENVHYAAKAFLCTEIA 128 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G LD+ S GEL AL A P ERI G K++ E+ A+++G+ ++S + Sbjct: 129 RWIDEEGLSLDVCSGGELAVALHASFPPERISLHGNNKSVAELKDAVKAGVGYIVLDSTT 188 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYAS 186 E++ L+ A G + R+ + A+TH+ I+T ++ KFG+ + ++ Sbjct: 189 EIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFIATAHEDQKFGLSVASGAAMAAVRRVF 248 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKL-----LRDLTQQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI + F A + + + +D+GGGLG Sbjct: 249 ATDNLRLVGLHSHIGSQIFDVAGFELAAHRVIGLLCDIVGEFDPEKTAQLSIVDLGGGLG 308 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y D PP + A S G K+++EPGR + I + +V Sbjct: 309 ISYLPDDDPPPIFELAAKLGAIVSNESAAVGLPVPKLMVEPGRAIAGPGTITLYEVGTIK 368 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D M+D +R LYDA +++ + D A IVG CE+GD Sbjct: 369 DVDVSATAHRRYVSIDGGMSDNIRTALYDAQYDVRLVSR-TSDAPAAPASIVGKHCESGD 427 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + + +PGDL+ + TGAY S YN + V Q +I R T Sbjct: 428 IVVRDTWVPDDLKPGDLVGVAATGAYCYSLSSRYNMLGRPAVVAVCAGQARLILRRETVD 487 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 488 DLLSLEV 494 >gi|311745312|ref|ZP_07719097.1| diaminopimelate decarboxylase [Algoriphagus sp. PR1] gi|126577845|gb|EAZ82065.1| diaminopimelate decarboxylase [Algoriphagus sp. PR1] Length = 410 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 116/412 (28%), Positives = 189/412 (45%), Gaps = 18/412 (4%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L + VSL +A TP Y Y I T AF + + YA KA +N ++K Sbjct: 8 LTIQGVSLNSVAEQFGTPVYVYDGDKITSQIKTLQQAFSKVPLKIKYATKALTNVNILKV 67 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + G +D VS E+R L A AE I+++ G +++EI ++ G Sbjct: 68 VKLAGGEVDAVSVQEVRLCLEAGFKAEDIMYTPNGVSLEEIKEVVELGAMINLDNLPV-- 125 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 L + G + P+ R+NP I A + KIS G KFG+ IHQ+ + Sbjct: 126 --LELFGQTYGHEVPVCIRINPHIMAGGNAKISVGHIASKFGVSIHQLDEILELV---KK 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 I +H+ + D +++ ++ + ++ +D GGG + Y Sbjct: 181 YNIQVTGLHLHTGSDILDAEVFL--KSGNVLFEAALKFPELKFLDFGGGFKVGYKEGDVV 238 Query: 251 PSSSDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + + + + F K LEPG+F+V++ G L+ + +KK+ TFV + Sbjct: 239 TDMMEVGNRVSEAFLKFCEKYGKKLELWLEPGKFVVSEAGSLLVQANVVKKTPQITFVGV 298 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 + +N +RP +YDAYH++ + N + ++VG ICET D IA R IA R GD Sbjct: 299 NSGLNHLIRPMMYDAYHDVYNLSN--PEGEEKKYNVVGYICET-DTIAAERDIAEVRMGD 355 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 L I+ GAYG + YNSRL E+++ + +IR R F++L+ + Sbjct: 356 FLAIKNAGAYGISMASNYNSRLRPAEVLIWEGKARLIRKREEFEDLLRNQVV 407 >gi|303327333|ref|ZP_07357774.1| diaminopimelate decarboxylase [Desulfovibrio sp. 3_1_syn3] gi|302862273|gb|EFL85206.1| diaminopimelate decarboxylase [Desulfovibrio sp. 3_1_syn3] Length = 426 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 104/407 (25%), Positives = 183/407 (44%), Gaps = 18/407 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +LA TP Y Y+ + + + V Y++KAN+N +++ + G + Sbjct: 21 RELAETYGTPLYVYNENVLRQRCRDLTALSGQPGFGVNYSIKANANPVLLRMIREEGLVV 80 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D +S GEL A I++ + E+ AL G+ Sbjct: 81 DAMSPGELFMNDLAGFTPAEILYISNNNSDTELQNALVHGLLVSVDSLSQLDTL-----G 135 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 L + + R NP I A H K+ T KE KFG+ ++ ++A + ++G++ Sbjct: 136 RLNRGGKVMVRFNPGIGAGHHAKVVTAGKETKFGVTPDKMDEVFALLARHELT-LAGINQ 194 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGS + + + A ++L DL + L + I GG + + + D A Sbjct: 195 HIGSLFMEPDGYLNAARVLLDLAETLPDGALDRLEIIDFGGGFGIPYHKYEGEARLDMAD 254 Query: 259 LIHQYFGN---------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 L + + + ++EPGR++ A+ G+L+ +V ++K + DK +V D+ N Sbjct: 255 LGRRLHAMISGWAASAGYKGRFLVEPGRYVAAECGVLLGRVHAVKNNGDKRYVGTDLGFN 314 Query: 310 DFMRPTLYDAYHEINYIVNPAG--DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 +RP +YD++H++ G D + IVG ICE+GD +A +R + + R GD+L Sbjct: 315 VLVRPAMYDSFHDVEIYRGEKGAADAEPMRQTIVGNICESGDILAKDRLLPVMREGDVLG 374 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 I GAYG + YN R E+++ + +IR R T ++L Sbjct: 375 ILDAGAYGFTMASNYNQRRRPAEVLIQSDGTARLIRRRETLEDLARC 421 >gi|168025185|ref|XP_001765115.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683702|gb|EDQ70110.1| predicted protein [Physcomitrella patens subsp. patens] Length = 515 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 136/420 (32%), Positives = 226/420 (53%), Gaps = 12/420 (2%) Query: 3 AFKYFE-GSLHAENVSLEKL----AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY 57 AF + G ++ E V ++++ ++ PFY YS + +NY + A G+++++ Y Sbjct: 93 AFPVRDDGYMYCEEVRVQEIMDNEVEELR-PFYLYSKKQLRRNYEAYQEALQGLNSIIGY 151 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELR-RALAAPVPAERIVFSGVGKTIDEIDLALQ 116 A+KAN+N +++ L LGSG +VS ELR A R VF+G GK ++E++LA Q Sbjct: 152 AVKANNNLKIMQHLRELGSGAVLVSGTELRLAVEHADFDPARCVFNGNGKLLEELELAAQ 211 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 G+ +L + + + GKK + R+NPD++ H ++TG K KFGI Sbjct: 212 YGVLINVDSEF-DLAQIIEASRITGKKVKVLLRINPDVDPQVHPYVATGNKNSKFGIRNE 270 Query: 177 QIHSLYAYASTLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 ++ + P ++ GV H+GS I +++ F A ++ D ++RS NIQ+++ Sbjct: 271 KLWWFLEQVKSHPDNLELVGVHCHLGSTITKVDVFRDAAVVMVDFVNKIRSENFNIQYLN 330 Query: 236 VGGGLGI-AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 +GGGLGI YH P+ D + + +I+EPGR LVA+ + V+ V +K Sbjct: 331 IGGGLGIDYYHKGAVLPTPKDLIDTVRELVTKEGLTLIIEPGRSLVANTSVFVSNVTGVK 390 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + K F+++D +M++ +RP+LYDAY I ++ PA D+VGP+CE+ DF+ Sbjct: 391 TNGTKNFIVIDGSMSELIRPSLYDAYQHIEFVAPPAEGAEAKTYDVVGPVCESADFLGKE 450 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE--IMVNGSQFHIIRPRMTFQELIE 412 R++A P+ GD+L + GAY S TYN R+ PE ++ +G IR + I Sbjct: 451 RQLATPKRGDVLVVHDAGAYCMAMSSTYNLRMRAPEYWVLEDGKTVEKIRHAEQLDDHIR 510 >gi|312140420|ref|YP_004007756.1| diaminopimelate decarboxylase lysa [Rhodococcus equi 103S] gi|311889759|emb|CBH49076.1| diaminopimelate decarboxylase LysA [Rhodococcus equi 103S] Length = 447 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 120/419 (28%), Positives = 190/419 (45%), Gaps = 18/419 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + V+L+ +A TP Y + + AF + YA KA + +AV Sbjct: 33 GRIRVGGVALDDIADQYGTPTYVLDEDDVRHRCRAYRTAFPE--AEIAYAAKALTTRAVA 90 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + G LD+ SEGEL A +A V RI+ G KT E+ A+ G+ V+S + Sbjct: 91 DWVTSEGLSLDVCSEGELAIARSAGVAPSRIILHGNAKTATELRTAVGVGVGRIVVDSHN 150 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHSLYAYAS 186 E++ L ++ + R PDI+ + H ++TG + KFG PI+ + + Sbjct: 151 EIRLLA---SLARRRQRVLVRATPDIDIHGHPAVTTGVDDQKFGFPINGGHLDAAVRLVL 207 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH-IDVGGGLGIAYH 245 P +++ G+ H+GSQI +E F A + +Q+R + I +++GGG + Y Sbjct: 208 EQPSLELVGLHCHLGSQITDVELFASAVDRMIGRMEQIRRDHGVILTNLNLGGGHAVPYL 267 Query: 246 SDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK-SA 297 + A + I LEPGR +VA G+ + +V+SIK S Sbjct: 268 PGDPQIDLTRLAGVLDDALDEACARNRFPRPGITLEPGRGIVARGGVTLYRVVSIKTGSG 327 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 +TFV +D M+D R LY A ++ + N H+ +VG CE GD +A + + Sbjct: 328 GRTFVAVDGGMSDNPRVALYGARYD-VAVANRHPTGAHMPVTVVGRHCEAGDVLARDVSL 386 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGD+L + TGAY + TYNS P + V G + R T +L+ D Sbjct: 387 PCDLHPGDVLAVPCTGAYHHCLASTYNSVGRPPMVAVRGGSARELIRRETAADLLSRDV 445 >gi|163846166|ref|YP_001634210.1| diaminopimelate decarboxylase [Chloroflexus aurantiacus J-10-fl] gi|222523912|ref|YP_002568382.1| diaminopimelate decarboxylase [Chloroflexus sp. Y-400-fl] gi|163667455|gb|ABY33821.1| diaminopimelate decarboxylase [Chloroflexus aurantiacus J-10-fl] gi|222447791|gb|ACM52057.1| diaminopimelate decarboxylase [Chloroflexus sp. Y-400-fl] Length = 434 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 114/426 (26%), Positives = 184/426 (43%), Gaps = 15/426 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKA 61 +G L LA TP Y + + AF ++V YA KA Sbjct: 13 SVVDGRLWIGGCDTVALAEQFGTPLYLLDDLTLRGAMRAYRQAFATAYPGPSIVHYAGKA 72 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N A+ + +A G GLD+VS EL A A +P +R+ G K+ E++ A+ + Sbjct: 73 LLNTALAQIVAQEGLGLDVVSATELLVAQRAGLPMDRVHLHGNAKSDQELERAIAWRVGA 132 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V++ EL+ L L + RV P I A+TH I+TG KFG+P+ + Sbjct: 133 IVVDNLDELQRLCALTSHLTTPQGVLLRVAPAIEADTHAHIATGSATAKFGLPLEALDEA 192 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH-IDVGGGL 240 A P ++ G+ HIGSQ+ +E ++L L ++R + GGGL Sbjct: 193 VAQTLAAPSLRWLGLHAHIGSQLFALEQVTATVEVLVALAARIRDRFGVAPVELSPGGGL 252 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISI 293 G+ Y +D YA ++ + +EPGR +VA G+ + +V+ Sbjct: 253 GVPYTADQPATDIGRYAQVVSAALCAACERYRLPLPRLTVEPGRSIVARAGVALYRVVGR 312 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K + +V +D M D +RP LY A + + N + ++ G CE+GD + Sbjct: 313 K---GEHWVHIDGGMADNIRPALYGARY-SAVLANKPASPPAMTVNVGGRYCESGDVLLR 368 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + +P DLL + GAY S TYN ++V Q +I+ R T +++ Sbjct: 369 DIALPTVQPDDLLAVATAGAYTLSMSSTYNLVPRPALVLVADGQARLIQRRETEADVLAR 428 Query: 414 DSIPAW 419 D + Sbjct: 429 DLLLDR 434 >gi|255324500|ref|ZP_05365617.1| diaminopimelate decarboxylase [Corynebacterium tuberculostearicum SK141] gi|255298406|gb|EET77706.1| diaminopimelate decarboxylase [Corynebacterium tuberculostearicum SK141] Length = 445 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 117/427 (27%), Positives = 194/427 (45%), Gaps = 20/427 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + V L L QTP Y + + AF G + V YA KA ++ Sbjct: 20 EDGVVTIAGVPLPDLVEEFQTPLYVFDEDDFRSRCQDMARAFGGPEH-VHYASKAFISKK 78 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 ++ + G LD S EL+ ALAA PAERI G K + + L + +G+ +++ Sbjct: 79 IVNWVNEEGLCLDAASLNELKIALAAEFPAERITTHGNNKDEEYLRLCVDAGVGHVVIDN 138 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E EL+ LN+ A GK P+ RV P ++A+TH+ I+T ++ KFGI + + A Sbjct: 139 ELELEELNRIAGEAGKVQPVMIRVKPGVDAHTHEFIATAHEDQKFGISLATGAAFAAAKR 198 Query: 187 TLPGVKIS--GVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIA 243 L + G+ H+GSQ+ E F A + + L +Q G ++ +D+GGG GI Sbjct: 199 CLEADNLHLSGLHCHVGSQVFNAEGFKLAAERVMGLYRQIYTELGVTLEELDLGGGFGIP 258 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKV------ 290 Y A + + +++EPGR LVA + V +V Sbjct: 259 YMPYEEALDIERVAGDMLGAVKHTAEELGIEAPFLLVEPGRSLVAGSAVTVYRVGTVKDV 318 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + ++ +D M+D +RP LY + ++ +VN D + + +VG CE+GD Sbjct: 319 ETGKSDLPLRRYISVDGGMSDNIRPALYGSAYD-VRVVNRFSDGEEVPSRVVGFHCESGD 377 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + ++ +PGDL+ TG Y + S YN + + Q + R T + Sbjct: 378 ILLEDGELPNDIQPGDLIAFAATGGYQYMMSSRYNGAVRPAVVATRVGQTKPMLRRETIE 437 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 438 DLLSLEV 444 >gi|254250170|ref|ZP_04943490.1| Diaminopimelate decarboxylase [Burkholderia cenocepacia PC184] gi|124876671|gb|EAY66661.1| Diaminopimelate decarboxylase [Burkholderia cenocepacia PC184] Length = 412 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 128/415 (30%), Positives = 183/415 (44%), Gaps = 27/415 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + G+ Sbjct: 8 LAALAQQYGTPLWVYDADVIRDRIAQLRQ-FD----VIRYAQKANSNVHILKLMRDEGAC 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA GV T D ID + + V + + R Sbjct: 63 VDAVSLGEIERSLAAGFSPGGE-PEGVVFTADLIDRPTLAAVLEHGVTVNAGSLDMLARI 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP K +TG + K GI I + K+ G+ Sbjct: 122 GEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + ++ + + S GH+I I GGGL I Y Y Sbjct: 181 MHIGSGV----DYGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYF 236 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 S +I +EPGRFLVA+ G LVT+V ++ + FV++D ND Sbjct: 237 SQWDAARKRIERHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDL 296 Query: 312 MRPTLYDAYHE---INYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP++Y +YH + R + I GP+CE+GD + RK+A P+ Sbjct: 297 MRPSMYGSYHAVSVHAHDGALPAGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQ 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL++ GAYGA S YNSR L PE++V+ +IR R T EL+ L++ Sbjct: 357 IGDLLFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLALETF 411 >gi|72382497|ref|YP_291852.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. NATL2A] gi|72002347|gb|AAZ58149.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. NATL2A] Length = 454 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 107/421 (25%), Positives = 179/421 (42%), Gaps = 12/421 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 L L +LA TP Y ++ T+ ++ + ++ +A KANS+ Sbjct: 31 KKLVVGGCQLSELAKKYGTPLYVLDELSLRTACKTYISSLNKHYPGKSLPLFASKANSSL 90 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ ++ G GLD VSEGEL A+ V + IVF G K+ DE++ A + + Sbjct: 91 AICAVISSEGFGLDAVSEGELLTAINGGVKEKDIVFHGNNKSQDELNFAYSNNVTIVLDN 150 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 L + S K A + R P I +TH+ I TG + KFG ++ S+ Sbjct: 151 --YHDIELLKNIASDNKPAKLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDELKSILEEL 208 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 T ++G+ HIGSQI +++ ++ D + + GH + +++GGGLGI Y Sbjct: 209 KTYKWANLTGLHAHIGSQIFEVQPHIDLAGVMADALKLAKEIGHPVVDLNLGGGLGIKYV 268 Query: 246 SDHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSAD 298 + PPS + +I + N + + EPGR LVA+ G+ + K+ + K Sbjct: 269 QEDNPPSIEKWVEIISKAVVNACRERNLDLPRLMCEPGRSLVANSGLTIYKIGAKKVVPG 328 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + + +V+ + I G CE+GD + + + Sbjct: 329 VRTYLSVDGGMSDNPRPITYQSLYSACLVDKPMNTNFEKVTIAGKHCESGDVLLKDFLLP 388 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 GD L + TGAY S YN I+V + + R ++L++LD +P Sbjct: 389 SCESGDFLAVFGTGAYNYSMSSNYNRIPRPATIIVGKGLAELTQRRELPEDLLQLDVLPD 448 Query: 419 W 419 Sbjct: 449 R 449 >gi|309790697|ref|ZP_07685248.1| diaminopimelate decarboxylase [Oscillochloris trichoides DG6] gi|308227291|gb|EFO80968.1| diaminopimelate decarboxylase [Oscillochloris trichoides DG6] Length = 445 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 121/432 (28%), Positives = 191/432 (44%), Gaps = 15/432 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 G L V+L LA TP Y + + +A + V YA KA N Sbjct: 16 GQLWVGGVALPALAEAYATPLYIIDEVTLRGAMRAYRHALARHYPAPSRVHYASKALLNI 75 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 AV + G GLD+VS EL A A V I G K+ E+ AL G+ V+ Sbjct: 76 AVAQVAQQEGLGLDLVSAAELLVARRAGVDMTSIHLHGNAKSDAELHRALDWGVGAVVVD 135 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + EL+ L + + P+ RV PDI A+TH I+TG + KFG P+ + Sbjct: 136 NLDELERLIALSAGHPQPQPVLLRVAPDIAAHTHAHIATGAADAKFGFPLAALPVAIERI 195 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIAY 244 PG+ + G+ HIGSQI ++ ++L Q+R G ++ + GGGLG+ Y Sbjct: 196 LAAPGLHLRGLHAHIGSQIFELGQLAATVQVLVAALAQIRAQYGVTLEELSPGGGLGVPY 255 Query: 245 HSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 YA + + +EPGR ++A G+ + +V++ K +A Sbjct: 256 TDAMPATDIDGYAQALAAATQQACAAHNFPLPLLTVEPGRSIIARAGVALYRVVARKFAA 315 Query: 298 DKT--FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 D ++ +D M D +RP LY A + + N A + G CE+GD + + Sbjct: 316 DGRLLYLHVDGGMADNIRPALYAARY-TALLANRADAPPTAPVSVAGRYCESGDILLRDA 374 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GD+L + GAY + TYN +++N Q +I+ R T ++L+ D Sbjct: 375 PLPAAQLGDVLAVAGAGAYTLSMASTYNMSPRPALLLLNAGQVQVIQRRETEEDLLARD- 433 Query: 416 IPAWLQKTPKQS 427 +P +TP+ Sbjct: 434 LPLAATETPQSR 445 >gi|224080381|ref|XP_002306119.1| predicted protein [Populus trichocarpa] gi|222849083|gb|EEE86630.1| predicted protein [Populus trichocarpa] Length = 487 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 135/410 (32%), Positives = 223/410 (54%), Gaps = 4/410 (0%) Query: 7 FEGSLHAENVSLEKLAHVV-QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 +G L EN+ ++++ V + PFY YS I +N + +A G+++++ YA+KAN+N Sbjct: 75 KDGFLCCENLKVQEIMENVEKRPFYLYSKPQITRNVEAYKDALQGLNSIIGYAIKANNNL 134 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ L LG G +VS ELR AL A R +F+G GK +D++ LA Q G++ NV+ Sbjct: 135 KILEHLRGLGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKLLDDLVLAAQEGVF-VNVD 193 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 SE +L+ + A GKK + R+NPD++ H ++TG K KFGI ++ Sbjct: 194 SEFDLENIVAAARIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAV 253 Query: 186 S-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-A 243 +K+ G H+GS I +++ F A L+ + ++R+ G + ++++GGGLGI Sbjct: 254 KAHRDELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDEIRAQGFEVDYLNIGGGLGIDY 313 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 YHS P+ D + + + +I+EPGR L+A+ LV +V +K + K FV+ Sbjct: 314 YHSGAVLPTPRDLIDTVRELVLSRDLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFVV 373 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D +M + +RP+LYDAY I + + D+VGP+CE+ DF+ +R++ P G Sbjct: 374 IDGSMAELIRPSLYDAYQHIELVSPASPKAEVSTFDVVGPVCESADFLGKDRELPTPAKG 433 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 L + GAY + TYN ++ PE V IR TF++ I Sbjct: 434 AGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDGTVSKIRHGETFEDHIRF 483 >gi|282853784|ref|ZP_06263121.1| diaminopimelate decarboxylase [Propionibacterium acnes J139] gi|282583237|gb|EFB88617.1| diaminopimelate decarboxylase [Propionibacterium acnes J139] gi|314981443|gb|EFT25537.1| diaminopimelate decarboxylase [Propionibacterium acnes HL110PA3] gi|315092108|gb|EFT64084.1| diaminopimelate decarboxylase [Propionibacterium acnes HL110PA4] Length = 476 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 117/429 (27%), Positives = 183/429 (42%), Gaps = 20/429 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V++ +L +P Y + + + F +AF D V YA KA + + Sbjct: 45 DGIVEVAGVTVTELLSQYGSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTI 102 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G LD + GEL AL + RI G K+IDE+ LAL G+ V+S Sbjct: 103 ASWIDQEGLFLDTCTGGELITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSL 162 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ + Q G A + RV + A+TH+ I+T ++ KFG I ++ A Sbjct: 163 DEIMRIEQLCRENGWHARVMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRC 222 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAY 244 + + GV HIGSQI F A + L +Q G + +D+GGG GIAY Sbjct: 223 HTSDAIDLLGVHSHIGSQIFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAY 282 Query: 245 HSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 S P + A + + I LEPGR +V + + V ++K Sbjct: 283 TSQDSPATVESLAGALREIVTVEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVD 342 Query: 298 -----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + +V +D M+D +RP LY A + I N + + IVG CE GD + Sbjct: 343 LDTGAQRMYVSVDGGMSDNIRPALYAAEY-SAVIANRTSEVAPVLCRIVGKHCEAGDILV 401 Query: 353 LNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHII-RPRMTFQEL 410 + + PGD++ + GAY + YN + VN + ++ R +L Sbjct: 402 RDVYLPGDVSPGDVIAVPGAGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDL 461 Query: 411 IELDSIPAW 419 + LD P Sbjct: 462 LALDPGPIR 470 >gi|50842737|ref|YP_055964.1| diaminopimelate decarboxylase [Propionibacterium acnes KPA171202] gi|289425258|ref|ZP_06427035.1| diaminopimelate decarboxylase [Propionibacterium acnes SK187] gi|289428558|ref|ZP_06430242.1| diaminopimelate decarboxylase [Propionibacterium acnes J165] gi|295130818|ref|YP_003581481.1| diaminopimelate decarboxylase [Propionibacterium acnes SK137] gi|50840339|gb|AAT83006.1| diaminopimelate decarboxylase [Propionibacterium acnes KPA171202] gi|289154236|gb|EFD02924.1| diaminopimelate decarboxylase [Propionibacterium acnes SK187] gi|289158252|gb|EFD06471.1| diaminopimelate decarboxylase [Propionibacterium acnes J165] gi|291375992|gb|ADD99846.1| diaminopimelate decarboxylase [Propionibacterium acnes SK137] gi|313764209|gb|EFS35573.1| diaminopimelate decarboxylase [Propionibacterium acnes HL013PA1] gi|313772070|gb|EFS38036.1| diaminopimelate decarboxylase [Propionibacterium acnes HL074PA1] gi|313801617|gb|EFS42857.1| diaminopimelate decarboxylase [Propionibacterium acnes HL110PA2] gi|313807761|gb|EFS46248.1| diaminopimelate decarboxylase [Propionibacterium acnes HL087PA2] gi|313810269|gb|EFS47990.1| diaminopimelate decarboxylase [Propionibacterium acnes HL083PA1] gi|313812703|gb|EFS50417.1| diaminopimelate decarboxylase [Propionibacterium acnes HL025PA1] gi|313816302|gb|EFS54016.1| diaminopimelate decarboxylase [Propionibacterium acnes HL059PA1] gi|313818797|gb|EFS56511.1| diaminopimelate decarboxylase [Propionibacterium acnes HL046PA2] gi|313820570|gb|EFS58284.1| diaminopimelate decarboxylase [Propionibacterium acnes HL036PA1] gi|313822625|gb|EFS60339.1| diaminopimelate decarboxylase [Propionibacterium acnes HL036PA2] gi|313825441|gb|EFS63155.1| diaminopimelate decarboxylase [Propionibacterium acnes HL063PA1] gi|313827405|gb|EFS65119.1| diaminopimelate decarboxylase [Propionibacterium acnes HL063PA2] gi|313830599|gb|EFS68313.1| diaminopimelate decarboxylase [Propionibacterium acnes HL007PA1] gi|313833636|gb|EFS71350.1| diaminopimelate decarboxylase [Propionibacterium acnes HL056PA1] gi|313838330|gb|EFS76044.1| diaminopimelate decarboxylase [Propionibacterium acnes HL086PA1] gi|314915687|gb|EFS79518.1| diaminopimelate decarboxylase [Propionibacterium acnes HL005PA4] gi|314917946|gb|EFS81777.1| diaminopimelate decarboxylase [Propionibacterium acnes HL050PA1] gi|314920327|gb|EFS84158.1| diaminopimelate decarboxylase [Propionibacterium acnes HL050PA3] gi|314924934|gb|EFS88765.1| diaminopimelate decarboxylase [Propionibacterium acnes HL036PA3] gi|314931547|gb|EFS95378.1| diaminopimelate decarboxylase [Propionibacterium acnes HL067PA1] gi|314955477|gb|EFS99882.1| diaminopimelate decarboxylase [Propionibacterium acnes HL027PA1] gi|314957932|gb|EFT02035.1| diaminopimelate decarboxylase [Propionibacterium acnes HL002PA1] gi|314960541|gb|EFT04643.1| diaminopimelate decarboxylase [Propionibacterium acnes HL002PA2] gi|314962556|gb|EFT06656.1| diaminopimelate decarboxylase [Propionibacterium acnes HL082PA1] gi|314967580|gb|EFT11679.1| diaminopimelate decarboxylase [Propionibacterium acnes HL037PA1] gi|314973601|gb|EFT17697.1| diaminopimelate decarboxylase [Propionibacterium acnes HL053PA1] gi|314975823|gb|EFT19918.1| diaminopimelate decarboxylase [Propionibacterium acnes HL045PA1] gi|314978712|gb|EFT22806.1| diaminopimelate decarboxylase [Propionibacterium acnes HL072PA2] gi|314983699|gb|EFT27791.1| diaminopimelate decarboxylase [Propionibacterium acnes HL005PA1] gi|314987879|gb|EFT31970.1| diaminopimelate decarboxylase [Propionibacterium acnes HL005PA2] gi|314989690|gb|EFT33781.1| diaminopimelate decarboxylase [Propionibacterium acnes HL005PA3] gi|315077770|gb|EFT49821.1| diaminopimelate decarboxylase [Propionibacterium acnes HL053PA2] gi|315080397|gb|EFT52373.1| diaminopimelate decarboxylase [Propionibacterium acnes HL078PA1] gi|315085411|gb|EFT57387.1| diaminopimelate decarboxylase [Propionibacterium acnes HL002PA3] gi|315088531|gb|EFT60507.1| diaminopimelate decarboxylase [Propionibacterium acnes HL072PA1] gi|315095874|gb|EFT67850.1| diaminopimelate decarboxylase [Propionibacterium acnes HL038PA1] gi|315098778|gb|EFT70754.1| diaminopimelate decarboxylase [Propionibacterium acnes HL059PA2] gi|315101451|gb|EFT73427.1| diaminopimelate decarboxylase [Propionibacterium acnes HL046PA1] gi|315105824|gb|EFT77800.1| diaminopimelate decarboxylase [Propionibacterium acnes HL030PA1] gi|315108743|gb|EFT80719.1| diaminopimelate decarboxylase [Propionibacterium acnes HL030PA2] gi|327326425|gb|EGE68215.1| diaminopimelate decarboxylase [Propionibacterium acnes HL096PA2] gi|327329881|gb|EGE71635.1| diaminopimelate decarboxylase [Propionibacterium acnes HL097PA1] gi|327331700|gb|EGE73437.1| diaminopimelate decarboxylase [Propionibacterium acnes HL096PA3] gi|327443476|gb|EGE90130.1| diaminopimelate decarboxylase [Propionibacterium acnes HL013PA2] gi|327445679|gb|EGE92333.1| diaminopimelate decarboxylase [Propionibacterium acnes HL043PA2] gi|327448337|gb|EGE94991.1| diaminopimelate decarboxylase [Propionibacterium acnes HL043PA1] gi|327450538|gb|EGE97192.1| diaminopimelate decarboxylase [Propionibacterium acnes HL087PA3] gi|327454123|gb|EGF00778.1| diaminopimelate decarboxylase [Propionibacterium acnes HL083PA2] gi|328753206|gb|EGF66822.1| diaminopimelate decarboxylase [Propionibacterium acnes HL025PA2] gi|328753953|gb|EGF67569.1| diaminopimelate decarboxylase [Propionibacterium acnes HL087PA1] gi|328754688|gb|EGF68304.1| diaminopimelate decarboxylase [Propionibacterium acnes HL020PA1] gi|328760884|gb|EGF74449.1| diaminopimelate decarboxylase [Propionibacterium acnes HL099PA1] gi|332675662|gb|AEE72478.1| diaminopimelate decarboxylase [Propionibacterium acnes 266] Length = 476 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 117/429 (27%), Positives = 183/429 (42%), Gaps = 20/429 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V++ +L +P Y + + + F +AF D V YA KA + + Sbjct: 45 DGIVEVAGVTVTELLSQYGSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTI 102 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G LD + GEL AL + RI G K+IDE+ LAL G+ V+S Sbjct: 103 ASWIDQEGLFLDTCTGGELITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSL 162 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ + Q G A + RV + A+TH+ I+T ++ KFG I ++ A Sbjct: 163 DEIMRIEQLCRENGWHARVMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRC 222 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAY 244 + + GV HIGSQI F A + L +Q G + +D+GGG GIAY Sbjct: 223 HTSDAIDLLGVHSHIGSQIFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAY 282 Query: 245 HSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 S P + A + + I LEPGR +V + + V ++K Sbjct: 283 TSQDSPATVESLAGALREIVTLEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVD 342 Query: 298 -----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + +V +D M+D +RP LY A + I N + + IVG CE GD + Sbjct: 343 LDTGAQRMYVSVDGGMSDNIRPALYAAEY-SAVIANRTSEVAPVLCRIVGKHCEAGDILV 401 Query: 353 LNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHII-RPRMTFQEL 410 + + PGD++ + GAY + YN + VN + ++ R +L Sbjct: 402 RDVYLPGDVSPGDVIAVPGAGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDL 461 Query: 411 IELDSIPAW 419 + LD P Sbjct: 462 LALDPGPIR 470 >gi|271963175|ref|YP_003337371.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021] gi|270506350|gb|ACZ84628.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021] Length = 460 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 106/419 (25%), Positives = 176/419 (42%), Gaps = 15/419 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G++ + L +P Y + AF V YA KA + V Sbjct: 44 DGAVTIGGADVRDLVREHGSPLYVVDEEDFRSRCRDYREAF--TGGEVHYAGKAFLCREV 101 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + GLD+ S GEL AL+ P ERI G K++ E++ A+++G+ +S Sbjct: 102 ARWIMQEDLGLDVCSAGELAVALSVGFPPERITLHGNNKSLAELEKAVEAGVGHIVADSF 161 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYAYA 185 E+ L A G++ + RV + A+TH+ I+T + KFG + Sbjct: 162 EEIARLGFLADKHGRRPQVMIRVTVGVEAHTHEFIATAHDDQKFGFSLSSGAAAEAARRI 221 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 LP +++ G+ HIGSQI F A + L L Q++ + +D+GGG GI Y Sbjct: 222 LALPQLELVGLHSHIGSQITDTAGFEVAARRLATLLVQIKEEHGVVLPELDLGGGYGIPY 281 Query: 245 HSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + A + N K+ +EPGR + G+ + +V +IK Sbjct: 282 VEGDTALDVKEIADGLRGIVANVARSAGLPVPKLTVEPGRAIAGLAGVTLYEVGTIKDVE 341 Query: 298 D-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +T+V +D M+D +R LY A + + + + +VG CE+GD + + Sbjct: 342 GLRTYVSIDGGMSDNIRTALYGAEYTARLASRESSSGP-MLSRLVGKHCESGDMVVRDLW 400 Query: 357 IAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GDL+ + TGAY + YN + V +I R T +L+ Sbjct: 401 LPEDLATGDLVAVAGTGAYCRSLANNYNYLPKPAVVAVKDGVSRVIVRRETEDDLLRGQ 459 >gi|325675970|ref|ZP_08155653.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707] gi|325553208|gb|EGD22887.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707] Length = 447 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 120/419 (28%), Positives = 191/419 (45%), Gaps = 18/419 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + V+L+ +A TP Y + + AF + YA KA + +AV Sbjct: 33 GRIRVGGVALDDIADQYGTPTYVLDEDDVRHRCRAYRTAFPES--EIAYAAKALTTRAVA 90 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + G LD+ SEGEL A +A V RI+ G KT E+ A+ G+ V+S + Sbjct: 91 DWVTSEGLSLDVCSEGELAIARSAGVDPSRIILHGNAKTATELRTAVGVGVGRIVVDSHT 150 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHSLYAYAS 186 E++ L ++ + R PDI+ + H ++TG + KFG PI+ + + Sbjct: 151 EIRLLA---SLARRRQRVLVRATPDIDIHGHPAVTTGVDDQKFGFPINGGHLDAAVRLVL 207 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH-IDVGGGLGIAYH 245 P +++ G+ H+GSQI +E F A + + +Q+R + I +++GGG + Y Sbjct: 208 EQPSLELVGLHCHLGSQITDVELFASAVERMIGRMEQIRRDHGVILTNLNLGGGHAVPYL 267 Query: 246 SDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK-SA 297 + A + I LEPGR +VA G+ + +V+SIK S Sbjct: 268 PGDPQIDLTRLAGVLDDALDEACARNRFPRPDITLEPGRGIVARAGVTLYRVVSIKTGSG 327 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 +TFV +D M+D R LY A ++ + N H+ +VG CE GD +A + + Sbjct: 328 GRTFVAVDGGMSDNPRVALYGARYD-VAVANRHPTGAHMPVTVVGRHCEAGDVLARDVSL 386 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGD+L + TGAY + TYNS P + V G + R T +L+ D Sbjct: 387 PCDLHPGDVLAVPCTGAYHHCLASTYNSVGRPPMVAVRGGCARELIRRETAADLLSRDV 445 >gi|305682083|ref|ZP_07404887.1| diaminopimelate decarboxylase [Corynebacterium matruchotii ATCC 14266] gi|305658556|gb|EFM48059.1| diaminopimelate decarboxylase [Corynebacterium matruchotii ATCC 14266] Length = 452 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 116/428 (27%), Positives = 186/428 (43%), Gaps = 22/428 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + VSL +A TP + AF G + V YA KA Sbjct: 26 RDGGVSIAGVSLPSIAKEYGTPVMVVDEIDFRSRCRDMARAFGGPEH-VHYASKAFMTSR 84 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ + G LDI S GEL AL A PAERI G K + + G+ ++S Sbjct: 85 IVQWVNEEGLSLDIASHGELLVALHAGFPAERIAAHGNNKDAAFLRDCVSKGVGFVILDS 144 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAY 184 E++ LN A LG+ + RV P I+A+TH+ IST ++ KFG + Sbjct: 145 HQEIEDLNTIAAELGQTQDVLIRVKPGIDAHTHEFISTAHEDQKFGFSLASGSALKAARR 204 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV---GGGLG 241 LP +++ G+ H+GSQ+ E F A + + L + + + ++ GGG G Sbjct: 205 VVELPNLRLIGLHCHVGSQVFDAEGFSLAAERILKLYRTIIEECEVGEEFNILNLGGGYG 264 Query: 242 IAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 IAY +P + + I +EPGR + + V V ++K Sbjct: 265 IAYVEGEQPLDVEAVSTDLLQRVNTYAERLHLTMPFIKVEPGRAIAGPSTVTVYTVGTVK 324 Query: 295 KSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + ++ +D M D +RP LY A ++ +VN + D I +VG CE+GD Sbjct: 325 DVTIDGGKTRRYISVDGGMGDNIRPALYGAEYD-IRLVNRSTDAPLIPTRVVGSHCESGD 383 Query: 350 FIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN--GSQFHIIRPRMT 406 + +R + RPGD++ + TGAY S YN + + V + H++ R T Sbjct: 384 ILINDRNLPEDIRPGDIVALAATGAYCYSMSSRYNMMMRPAIVSVGAADDKAHLMVRRET 443 Query: 407 FQELIELD 414 ++ L+ Sbjct: 444 LEDFFNLE 451 >gi|220904861|ref|YP_002480173.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869160|gb|ACL49495.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 425 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 105/406 (25%), Positives = 183/406 (45%), Gaps = 17/406 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +LA TP Y Y+ + + V Y++KANSN +++ G + Sbjct: 21 RELAETFGTPLYVYNENVLRQRCRDLMGLSSHPGFGVNYSVKANSNPVLLRMAREEGLVV 80 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D +S GEL L A +I++ +++E+ AL+ G+ Sbjct: 81 DAMSPGELHMDLLAGFTPGQILYISNNNSVEELQNALKHGLLISVDSVAQLDDL-----G 135 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + K + R NP I A H K+ T KE KFG+ Q+ ++A ++G++ Sbjct: 136 RINKGGKVMIRFNPGIGAGHHAKVVTAGKETKFGVNPEQMDDVFALLQKHDMT-LAGINQ 194 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAYHSDHRPPS----- 252 HIGS + + A ++L L +QL +++ ID GGG GI Y P Sbjct: 195 HIGSLFMEAGGYLDAAEVLLRLAEQLPQGALQHLEIIDFGGGFGIPYRKYEGQPRLDTGE 254 Query: 253 ---SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + ++EPGR++ A+ G+L+ +V ++K +++K + D+ N Sbjct: 255 LGSRLHALISAWAKKTGYTGRFLIEPGRYVAAECGVLLGRVHAVKNNSEKRYAGTDLGFN 314 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHA-DIVGPICETGDFIALNRKIALPRPGDLLYI 368 +RP +YD++H++ + ++ +VG ICE+GD +A +R++ GD+L I Sbjct: 315 VLVRPAMYDSFHDVEIYGENSHEKRETMVQTVVGNICESGDILAKDRELPEIVEGDVLGI 374 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 GAYG S YN RL E+++ + +IR R + +L Sbjct: 375 LDAGAYGFTMSSNYNQRLRPAEVLIQSDGTARLIRRRESPDDLARC 420 >gi|313791900|gb|EFS40001.1| diaminopimelate decarboxylase [Propionibacterium acnes HL110PA1] gi|327453381|gb|EGF00036.1| diaminopimelate decarboxylase [Propionibacterium acnes HL092PA1] Length = 476 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 117/429 (27%), Positives = 183/429 (42%), Gaps = 20/429 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V++ +L +P Y + + + F +AF D V YA KA + + Sbjct: 45 DGIVEVAGVTVTELLSQYGSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTI 102 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G LD + GEL AL + RI G K+IDE+ LAL G+ V+S Sbjct: 103 ASWIDQEGLFLDTCTGGELITALQGGMDPSRIGLHGNNKSIDELKLALSVGVGRIIVDSL 162 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ + Q G A + RV + A+TH+ I+T ++ KFG I ++ A Sbjct: 163 DEIMRIEQLCRENGWHARVMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRC 222 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAY 244 + + GV HIGSQI F A + L +Q G + +D+GGG GIAY Sbjct: 223 HTSDAIDLLGVHSHIGSQIFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAY 282 Query: 245 HSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 S P + A + + I LEPGR +V + + V ++K Sbjct: 283 TSQDSPATVESLAGALREIVTLEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVD 342 Query: 298 -----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + +V +D M+D +RP LY A + I N + + IVG CE GD + Sbjct: 343 LDTGAQRMYVSVDGGMSDNIRPALYAAEY-SAVIANRTSEVAPVLCRIVGKHCEAGDILV 401 Query: 353 LNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHII-RPRMTFQEL 410 + + PGD++ + GAY + YN + VN + ++ R +L Sbjct: 402 RDVYLPGDVSPGDVIAVPGAGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDL 461 Query: 411 IELDSIPAW 419 + LD P Sbjct: 462 LALDPGPIR 470 >gi|315453325|ref|YP_004073595.1| diaminopimelate decarboxylase [Helicobacter felis ATCC 49179] gi|315132377|emb|CBY83005.1| diaminopimelate decarboxylase [Helicobacter felis ATCC 49179] Length = 640 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 157/399 (39%), Positives = 228/399 (57%), Gaps = 4/399 (1%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 S+ ++A TPFY Y I++ +L F NAF G +++CYALKANSN +++ LA LG+ Sbjct: 5 SIVRIASAHPTPFYLYDFDQIKEAFLEFKNAFSGAKSLICYALKANSNLSLLAHLARLGA 64 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D VS E+RRAL A +P+ +I+FSGVGK EI AL+S I NVES EL+ + + Sbjct: 65 GGDCVSIYEVRRALLAGIPSYKIIFSGVGKLESEIQEALESKILFLNVESFEELQLIERI 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A L A I+ RVNP+INA TH ISTG E+KFG+ + ++ +A P ++ G+ Sbjct: 125 ATDLNTPARISVRVNPNINAQTHPYISTGLWENKFGVEEKEAVQMFMFAKQSPFLEPVGL 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 HIGSQ+ ++E +A + + L + L ++G ++ +D+GGGLG+ S +DY Sbjct: 185 HCHIGSQLIELEPIKEAGEKMHALARFLMASGVELKFLDMGGGLGV--DEGKGAISIADY 242 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + L +I EPGR +VAD G+LV++V +K A K F+I+D MND MRP L Sbjct: 243 TKPLKSIAQKLDLTLICEPGRRIVADSGVLVSRVQYVKPGARKNFIIVDAGMNDLMRPAL 302 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 Y + V + DIVGP+CE+ D + GDLL ++ GAYGA Sbjct: 303 YG--ARHSVEVLNTQEGTEAIYDIVGPVCESADCFLKEVPLKGVTRGDLLLFKQVGAYGA 360 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + YNSR I E+ V + I+R R +F + I + Sbjct: 361 SMASHYNSRPKILELGVEQDRVRILRDRESFFDNITHEI 399 >gi|163786031|ref|ZP_02180479.1| diaminopimelate decarboxylase [Flavobacteriales bacterium ALC-1] gi|159877891|gb|EDP71947.1| diaminopimelate decarboxylase [Flavobacteriales bacterium ALC-1] Length = 401 Score = 237 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 116/402 (28%), Positives = 189/402 (47%), Gaps = 12/402 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLG 75 +L K+ +P Y Y I Y + AFD + + YA+KA SN +++K LG Sbjct: 5 ALLKITKDFGSPVYVYDAEIITAQYKRLTKAFDKVKQLKINYAVKALSNISILKLFNTLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SG+D VS E++ L A AE I+F+ G +++EI+ + G+ + + Sbjct: 65 SGIDTVSIQEVQLGLKAGFKAEDIIFTPNGVSLEEIEEVSKLGVQINIDNLS-----VLE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + P+ R+NP + A + IS G + KFGI IHQI L I+G Sbjct: 120 QFGTKHPTIPVCIRINPHVMAGGNTNISVGHIDSKFGISIHQIPLLLRIVENTNMT-ING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I+ F A ++L + + ++ + + Sbjct: 179 IHMHTGSDILDIDVFLYASEILFETAKNFKNLDFIDFGSGFKVPYKVDDIETNIEELGEK 238 Query: 256 YASLIHQYFGNLQCKI--ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + +++ + ++ EPG+FLV++ G+ + KV +K++ F +D N +R Sbjct: 239 LSKRFNEFCKDYGKELTLAFEPGKFLVSEAGVFLVKVNVVKQTTSTVFAQVDSGFNHLIR 298 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P LY + HEI I NP G +VG ICET D A NR+I+ GD+L + GA Sbjct: 299 PMLYGSQHEILNISNPKGRERF--YSVVGYICET-DTFANNRRISEINQGDILCFKNAGA 355 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 Y + YNSR E++++ + H+IR R TF ++I Sbjct: 356 YCYSMASNYNSRYRPAEVLIHKDKAHLIRKRETFDDIISNQI 397 >gi|329939819|ref|ZP_08289120.1| diaminopimelate decarboxylase [Streptomyces griseoaurantiacus M045] gi|329301389|gb|EGG45284.1| diaminopimelate decarboxylase [Streptomyces griseoaurantiacus M045] Length = 463 Score = 237 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 117/408 (28%), Positives = 181/408 (44%), Gaps = 12/408 (2%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 + LA V TP Y + AF G D V YA KA ++AV++ L G L Sbjct: 56 KTLAEEVGTPAYVLDEEDFRARARAWRTAF-GHDADVFYAGKAFLSRAVVRWLDEEGLNL 114 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D+ S GEL AL+A + +RI F G KT EI A+++G+ ++S E+ + A Sbjct: 115 DVCSGGELATALSAGLAPDRIAFHGNNKTPAEIRRAVEAGVGRIVLDSFQEIVRVAHLAR 174 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYASTLPGVKISGV 196 LGK+ + RV + A+TH+ I+T ++ KFGIP+ A L + + G+ Sbjct: 175 ELGKRQRVQIRVTVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALQLDSLDVIGI 234 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSSD 255 HIGSQI + F A + L + +R + ID+GGGLGIAY S+ P + Sbjct: 235 HSHIGSQIFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSEDDPREPHE 294 Query: 256 YAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 A + +I +EPGR + + +V ++K + Sbjct: 295 IAKALTEIVTRECEAARLRTPRISVEPGRAIAGPTAFTLYEVGTVKPLEGLRTYVSVDGG 354 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLY 367 T +V+ D + +VG CE+GD + + + PGDL+ Sbjct: 355 MSDNIRTALYDAEYSVALVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIA 414 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + TGAY + YN L P + V + +I R T ++L+ LD Sbjct: 415 VPATGAYCRSMASNYNHALRPPVVAVREGEARVIVRRETEEDLLRLDV 462 >gi|167588224|ref|ZP_02380612.1| diaminopimelate decarboxylase [Burkholderia ubonensis Bu] Length = 412 Score = 237 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 125/413 (30%), Positives = 178/413 (43%), Gaps = 27/413 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KA SN ++K + G Sbjct: 8 LATLAQQYGTPLWVYDADVIRDRIAQLRR-FD----VIRYAQKACSNVHILKLMRDEGVL 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+LAA + GV T D ID + + V + + R Sbjct: 63 VDAVSLGEIERSLAAGFQPDGD-PEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARI 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP K +TG + K GI I + K+ G+ Sbjct: 122 GEHASGHRVWLRINPGFGHGHSNKTNTGGPQSKHGIWIGDVPRAIEIVRQYGL-KLVGIH 180 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + ++ + + S GH+I I GGGL I Y Y Sbjct: 181 MHIGSGV----DYGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVDHYF 236 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 S +I +EPGRFLVA+ G LV +V S+ + FV++D ND Sbjct: 237 SQWDAARKRIEQHLGHPVRIEIEPGRFLVAESGTLVAEVQSVNRRPKHDFVLIDAGFNDL 296 Query: 312 MRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP +Y +YH I + R H I GP+CE+GD + R + P+ Sbjct: 297 MRPAMYGSYHGITVHAPDGAEPDGRPLAHVAIAGPLCESGDVFTQDAGGVVTHRHLPQPQ 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GDLL++ GAYG+ S YNSR L PE++V+ +IR R T EL+ L+ Sbjct: 357 IGDLLFLHDAGAYGSSMSSNYNSRPLAPEVLVDRGAPRLIRRRQTITELLALE 409 >gi|325968867|ref|YP_004245059.1| diaminopimelate decarboxylase [Vulcanisaeta moutnovskia 768-28] gi|323708070|gb|ADY01557.1| diaminopimelate decarboxylase [Vulcanisaeta moutnovskia 768-28] Length = 401 Score = 237 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 112/406 (27%), Positives = 183/406 (45%), Gaps = 13/406 (3%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 ++L +LA+ TP Y +E+NY ++ ++ + Y++KAN N A++ L L Sbjct: 9 GINLTELANRFGTPLIVYDLGRVEENYRAIRDS---INAKILYSIKANPNLAILTLLRKL 65 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 GSG D S GE+ A A I+++G +++D+I + +G+ + L Sbjct: 66 GSGADAASPGEIFLATRAGFEPSNILYTGAYRSLDDIKYGINTGVLFNFDSRREFERALA 125 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + ++ +E KFG+ ++ Y+ A ++ + Sbjct: 126 LGYRPRTIFFRVDLGYGRGFAPG----VTLAGEESKFGMFLNDAIDAYSLAKSIGTEEFG 181 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 M + +D A L G I + D+GGG GI Y + S Sbjct: 182 IHAMMGSNVLDSDYFIRIAELLREHAETIEDRVGIRISYFDMGGGFGIPYRPGEKSLDLS 241 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + L + + G ++ +EPGRF+V + G LVT+V +K+ +TFV +DV MN +RP Sbjct: 242 KLSVLRNFFPG----ELWVEPGRFIVGNAGYLVTRVTEVKRKGGRTFVGVDVGMNVLIRP 297 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 LY AYH++ N + GPICE D +A+NR++ R GDLL I GAY Sbjct: 298 MLYGAYHQMITCGNNTEVTEVVDVV--GPICENTDKLAINRELPRVREGDLLIILNAGAY 355 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 S YN R EI+V +++ I R R L+ IP ++ Sbjct: 356 VYSMSSNYNGRPRPAEIVVYRNEYGIARFREPLDSLVTGQVIPGFI 401 >gi|18416698|ref|NP_568252.1| diaminopimelate decarboxylase, putative / DAP carboxylase, putative [Arabidopsis thaliana] gi|75306321|sp|Q94A94|DCDA2_ARATH RecName: Full=Diaminopimelate decarboxylase 2, chloroplastic; Short=DAP decarboxylase 2; Flags: Precursor gi|15146250|gb|AAK83608.1| AT5g11880/F14F18_50 [Arabidopsis thaliana] gi|22655428|gb|AAM98306.1| At5g11880/F14F18_50 [Arabidopsis thaliana] gi|332004351|gb|AED91734.1| diaminopimelate decarboxylase 2 [Arabidopsis thaliana] Length = 489 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 127/410 (30%), Positives = 218/410 (53%), Gaps = 5/410 (1%) Query: 8 EGSLHAENVSLEKLAHVV-QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L+ E ++ + V + PFY YS I +N + A +G+ +++ YA+KAN+N Sbjct: 77 DGFLYCEGTKVQDIMETVEKRPFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLK 136 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ L LG G +VS ELR AL A + +F+G GK+++++ LA Q G++ NV+S Sbjct: 137 ILEHLRSLGCGAVLVSGNELRLALLAGFDPTKCIFNGNGKSLEDLVLAAQEGVF-VNVDS 195 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E +L + + + GK+ + R+NPD++ H ++TG K KFGI ++ Sbjct: 196 EFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVK 255 Query: 187 TLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-AY 244 P K+ G H+GS I +++ F A L+ + ++R G + ++++GGGLGI Y Sbjct: 256 AHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYY 315 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 H+ P+ D + + + + +I+EPGR L+A+ V V +K + K F+++ Sbjct: 316 HAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVI 375 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D +M + +RP+LYDAY I + + D+VGP+CE+ DF+ +R++ P G Sbjct: 376 DGSMAELIRPSLYDAYQHIELVSPTPPEAEVTKFDVVGPVCESADFLGKDRELPTPPQGA 435 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 L + GAY + TYN ++ PE V IR TF + + Sbjct: 436 GLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSITKIRHAETFDDHLRF 485 >gi|111225300|ref|YP_716094.1| diaminopimelate decarboxylase [Frankia alni ACN14a] gi|111152832|emb|CAJ64577.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Frankia alni ACN14a] Length = 479 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 124/424 (29%), Positives = 199/424 (46%), Gaps = 15/424 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L V +++LA TP + + AF D V YA KA +A Sbjct: 50 RDGVLRVGGVRVDELAAEFGTPAFVLDEADFRARCAAWRRAFS--DCDVYYAGKAFLCRA 107 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + + G LD+ + GEL A + PA R++F G K++ E+ A+ G+ V+S Sbjct: 108 VARWVDEEGLNLDVCTGGELAVARSVGFPAGRLLFHGNNKSVAELRAAVAYGVGRIVVDS 167 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 +E+ L A G + + RV P + A+TH +STG+++ KFG + + A Sbjct: 168 FAEIDRLAAVAAEAGVRQRVLVRVTPGVEAHTHSYVSTGQEDQKFGFSLAGGAAAEAVER 227 Query: 187 TLPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIA 243 L ++ G+ HIGSQI F A + L ++R + +D+GGGLGIA Sbjct: 228 VLAAGSLELVGLHAHIGSQIFDTAGFGLAAHRMVGLLARVRDTHDLELPELDLGGGLGIA 287 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y S+ P +D A + G ++ +EPGR +V + + +V ++K+ Sbjct: 288 YTSEDAPLEVADVAERLTAVVGKECAAAGLAVPRLGVEPGRAVVGPTTVTLYEVGTVKEL 347 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +TFV +D M+D +R LYDA + + H+ +VG CE+GD +A + Sbjct: 348 PGLRTFVSVDGGMSDNIRTALYDARYTARLVSRAGSAAAHV-VTLVGRHCESGDVVAHDV 406 Query: 356 KIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + RPGDL+ + +GAY + YN P + V +I R T ++L+ LD Sbjct: 407 PLPDDVRPGDLVAVPASGAYHRSMASNYNHVTRPPVVAVRDGAARLIVRRETEEDLLRLD 466 Query: 415 SIPA 418 PA Sbjct: 467 IDPA 470 >gi|87306324|ref|ZP_01088471.1| diaminopimelate decarboxylase [Blastopirellula marina DSM 3645] gi|87290503|gb|EAQ82390.1| diaminopimelate decarboxylase [Blastopirellula marina DSM 3645] Length = 423 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 110/422 (26%), Positives = 170/422 (40%), Gaps = 26/422 (6%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 V + LA TP + Y I + AFD ++ YA KA SN A++ + Sbjct: 13 EIAGVPVLDLAAKYGTPTFVYDAAKIVERIEDLR-AFD----VIRYAQKACSNLAILDLM 67 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G +D VS E+RRALAA + + + T D D + + Sbjct: 68 RKNGVMVDAVSAWEIRRALAAGY-GAKGEPAPLVYTADIFDHEALALCVEHGLHVNCGSP 126 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + + I R+NP +K +TG ++ K GI Q+H A Sbjct: 127 DMIAQLGEAAPGSEITLRINPGFGHGHSQKTNTGGQQSKHGIWHEQLHECLLIADQHGVR 186 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + I ++ + + G I I GGGL I Y++ Sbjct: 187 V-----TGLHMHIGSGTDLEHLAQVCGSMEKAALEVGRTITTISAGGGLPIPYNASQTYV 241 Query: 252 SSSDYASLIHQYF------GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 Y L + + +EPGR+L A+ G L+ ++ +IK + F ++D Sbjct: 242 DLDQYFELWNGVRKRLQDSFGHTVSLEIEPGRYLSAESGFLLAEIRAIKTMGENKFYVVD 301 Query: 306 VAMNDFMRPTLYDAYHEINYI--VNPAGDRLHIHADIVGPICETGDFIALN-------RK 356 N+ RP LY +YH ++ +R H+ + GP+CE+GD R Sbjct: 302 AGFNNLARPILYGSYHPMSIALASGETDERPHLDVVVGGPLCESGDIFTQEEGGFVGTRS 361 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L IE GAYG V YNS+ L E+++ Q H+IR R TF+ LI + I Sbjct: 362 LPAASIGDFLVIECAGAYGFVMGSNYNSKPLAAEVLIRDGQTHLIRERQTFENLIAGEHI 421 Query: 417 PA 418 P Sbjct: 422 PG 423 >gi|254456643|ref|ZP_05070072.1| diaminopimelate decarboxylase [Candidatus Pelagibacter sp. HTCC7211] gi|207083645|gb|EDZ61071.1| diaminopimelate decarboxylase [Candidatus Pelagibacter sp. HTCC7211] Length = 404 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 141/387 (36%), Positives = 218/387 (56%), Gaps = 4/387 (1%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 KY + L E ++++ +A TP YCYS ++KN F F ++C+A+K+N+ Sbjct: 1 MKYIDNKLIIEKINVQYIAKKYGTPTYCYSHARLKKNINNFQKNFRSFSPLICFAVKSNT 60 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N +I+ + G G D+VS+GEL AL A V ++IVFSGVGKT +EI+ A++ I N Sbjct: 61 NVNLIREIKKFGLGADVVSKGELMMALKAGVSPKKIVFSGVGKTSEEINFAVEKKILLIN 120 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 ESESE++ +++ A +K I R+NP+ +A T +ISTGKK++KFG+ L Sbjct: 121 AESESEIREIDRVAKIKKRKVKIGIRLNPNTDAKTLSQISTGKKDNKFGVNEKTFFKLVN 180 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + + + + + +HIGSQI + + K K++ + ++ H + ID+GGG+GI+ Sbjct: 181 FCKSSKNIDLKCLSVHIGSQILDYKPYEKMLKVIDRIIHKI---NHKFEFIDLGGGMGIS 237 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 Y + + + S Y+ +I ++ + KII EPGR ++ D GIL++K+I IKK+ K F+I Sbjct: 238 YKYEDKKLNYSKYSEIIKKFLKKHKSKIIFEPGRSIIGDTGILISKIIYIKKNDSKNFII 297 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 LD AMND MRP LY H + + + + VGPICE+ D + Sbjct: 298 LDAAMNDLMRPALYG-AHHKILPSIKSKKKSNKTYEFVGPICESTDKFNTLKNFQELEEK 356 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPE 390 DL+ I GAYG S YN RL E Sbjct: 357 DLIVICDVGAYGMSLSSNYNVRLKPSE 383 >gi|227547995|ref|ZP_03978044.1| diaminopimelate decarboxylase [Corynebacterium lipophiloflavum DSM 44291] gi|227079901|gb|EEI17864.1| diaminopimelate decarboxylase [Corynebacterium lipophiloflavum DSM 44291] Length = 448 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 108/424 (25%), Positives = 182/424 (42%), Gaps = 18/424 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + V L ++A TP + AF G V YA KA + Sbjct: 19 EDGVVTIAGVPLPEIAEEYGTPVMVVDEDDFRSRCRDMAAAF-GAPENVHYASKAFLTRM 77 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G LD+ SE ELR ALAA P ERI G K+ + L ++G+ ++S Sbjct: 78 IARWVDEEGLALDVASENELRIALAANFPPERITVHGNNKSESFLTLCAEAGVGHVVIDS 137 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 EL LN LG + RV P ++A+TH+ ++T ++ KFG+ + + A Sbjct: 138 HQELAELNDVCGRLGTNQEVFVRVKPGVDAHTHEFVATSHEDQKFGLSLASGSAHKAAVD 197 Query: 187 TLPGVKIS--GVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGIA 243 + ++ G+ H+GSQ+ E F A + + L R NG + ++D+GGG GIA Sbjct: 198 AIAAANLTLSGLHCHVGSQVFDAEGFKLAAERVLGLYATIYRENGVALDYLDLGGGYGIA 257 Query: 244 YHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKV-----I 291 Y + + A + G +++EPGR + + V + + Sbjct: 258 YVDSEQALDVTGVARDLLSSVDQVAAELGIPAPTVVVEPGRAIAGPSTVTVYRAGTIKEV 317 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 + + ++ +D M+D +RP LYD+ ++ + D +VG CE+GD + Sbjct: 318 HTSHTTTRRYIAVDGGMSDNIRPALYDSAYDGRVVNRFV-DAPETETRLVGSHCESGDIL 376 Query: 352 ALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + GDL+ + TGAY S YN+ + V + R T +L Sbjct: 377 IGDALWPEDIATGDLIALAATGAYCYAMSSNYNAFGRPAVVAVRAGNIAPMLKRETVDDL 436 Query: 411 IELD 414 + + Sbjct: 437 LARE 440 >gi|229494021|ref|ZP_04387790.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121] gi|229319090|gb|EEN84942.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121] Length = 447 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 118/419 (28%), Positives = 192/419 (45%), Gaps = 18/419 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + +VSLE++A TP Y + T+ F D+ + YA KA +A+ Sbjct: 33 GRVCIGDVSLEEIADQYGTPTYVVDEADVRHRCRTYREIFP--DSEIVYAGKALMIRAMA 90 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 ++ G G+D+ S GEL ALAA V RI+ G K++ E+ A+ +G+ ++S S Sbjct: 91 TWVSDEGLGVDVCSAGELAVALAAGVDPNRIILHGNAKSVAELRAAVNAGVGRIVLDSPS 150 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH--SLYAYAS 186 E L + + RV P I+ + HK +STG + KFG+P + + Sbjct: 151 EAVRLA---SVCTHRQKVLVRVTPGIDIHGHKAVSTGIVDQKFGLPAFSEELEHTVSVVA 207 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYH 245 +++ G+ H+GSQI E F A + + +R + +D+GGG GIAY Sbjct: 208 NATHLQLIGLHCHLGSQITDPELFRPAIETMIAQMDDIRRTHRIILTELDLGGGHGIAYV 267 Query: 246 SDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS-IKKSA 297 + A + +I+LEPGR + A G+ + +V + S Sbjct: 268 PGDAQLDLTRLAHVIDETLDDACTRNRFPRPEIVLEPGRAIAARAGVTLYRVQNIKSISG 327 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 +TFV +D M+D R +LYD++++ +VN + G CE+GD IA+ ++ Sbjct: 328 GRTFVSVDGGMSDNPRVSLYDSHYD-VELVNRHSSAPLQEVTVAGRHCESGDEIAVGARL 386 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GDLL + TGAY + TYNS P + V G + R + +L+ + Sbjct: 387 PADLHEGDLLAVPCTGAYHHSMASTYNSVGRPPVVAVLGGIARPLIRRESINDLLAREV 445 >gi|255636652|gb|ACU18663.1| unknown [Glycine max] Length = 488 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 134/411 (32%), Positives = 222/411 (54%), Gaps = 5/411 (1%) Query: 7 FEGSLHAENVSLEKLAHVVQT-PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 +G L+ E + + + V+ PFY YS I +N + +A +G+ +++ YA+KAN+N Sbjct: 75 EDGYLYCEGLKVHDIMESVERRPFYLYSKPQITRNVEAYKDALEGLSSIIGYAIKANNNL 134 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ L HLG G +VS ELR AL A R +F+G GK ++++ LA Q G++ N++ Sbjct: 135 KILEHLRHLGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKILEDLVLAAQEGVF-VNID 193 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 SE +L+ + + A GKK + R+NPD++ H ++TG K KFGI ++ Sbjct: 194 SEFDLENITEAAKRAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAV 253 Query: 186 STLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-A 243 LP K+ G H+GS I +++ F A ++ + Q+R G + ++++GGGLGI Sbjct: 254 KELPNELKLVGAHCHLGSTITKVDIFRDAATIMINYIDQIRDQGFEVDYLNIGGGLGIDY 313 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 YHS P+ D + + +I+EPGR L+A+ LV +V +K + K F++ Sbjct: 314 YHSGAILPTPRDLIDTVRDLVISRGLNLIIEPGRSLIANTCCLVNRVTGVKSNGSKNFIV 373 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D +M + +RP+LYDAY I + + D+VGP+CE+ DF+ R++ P G Sbjct: 374 IDGSMAELIRPSLYDAYQHIELVSPAPSNAETTTFDVVGPVCESADFLGKGRELPTPAKG 433 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 L + GAY + TYN ++ PE V + IR TF++ I Sbjct: 434 TGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDDGSVSKIRHGETFEDHIRF 484 >gi|329906987|ref|ZP_08274530.1| Diaminopimelate decarboxylase [Oxalobacteraceae bacterium IMCC9480] gi|327547120|gb|EGF31991.1| Diaminopimelate decarboxylase [Oxalobacteraceae bacterium IMCC9480] Length = 368 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 161/368 (43%), Positives = 225/368 (61%), Gaps = 10/368 (2%) Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 CY++K+NSN AV+ L+ LGSG DIVS GEL R LAA E+++FSGVGKT DE+ LAL Sbjct: 2 CYSVKSNSNLAVLHLLSQLGSGFDIVSSGELLRVLAAGGNPEKVIFSGVGKTRDEMQLAL 61 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 GI CFNVES SEL L+ AV + A I+ RVNP+++A TH ISTG KE+KFG+ I Sbjct: 62 SHGIACFNVESTSELHRLSAVAVDMQLTASISLRVNPNVDAKTHPYISTGLKENKFGVAI 121 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 +Y A+ LPG+++ G+D HIGSQ+ +A L +L L + G I H+D Sbjct: 122 EDALMIYRTAAGLPGIRVVGIDCHIGSQLLDDAPLLEALDKLIELIDVLAAEGIVIHHLD 181 Query: 236 VGGGLGIAYH-------SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVT 288 +GGGLGI Y D+ + + + K++ EPGR +V + G+L+T Sbjct: 182 IGGGLGIDYEAEVPVAVGDYLTRLFRKIDLWRAEKYQGVPIKVLFEPGRSIVGNAGVLLT 241 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 +V +K ++K F I+D AMND MRP +Y A+H + +V G+ I D+VGP+CE+G Sbjct: 242 RVEYLKPGSEKNFAIVDAAMNDLMRPAMYQAWHGVQAVVQRGGEA--IVWDVVGPVCESG 299 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D++A R ++ GDLL I GAYG S YN+R E+MV+G+ H+IR R T + Sbjct: 300 DWLARARTLS-LEEGDLLAIHSAGAYGMTMSSNYNTRGRAAEVMVDGNVSHLIRQRETPE 358 Query: 409 ELIELDSI 416 +L L+ I Sbjct: 359 QLFALEKI 366 >gi|300775431|ref|ZP_07085293.1| diaminopimelate decarboxylase [Chryseobacterium gleum ATCC 35910] gi|300506171|gb|EFK37307.1| diaminopimelate decarboxylase [Chryseobacterium gleum ATCC 35910] Length = 400 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 125/404 (30%), Positives = 195/404 (48%), Gaps = 19/404 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L K+A+ TP Y Y +I+ Y +++F T YA KA +N ++K + +LG+ Sbjct: 6 LLKIANEFGTPVYVYDAESIKIQYEKLTSSFLKH-TKFFYAAKALTNINILKYVKNLGAS 64 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD VS E++ L A P E+I+F+ + EI+ A+ G++ + L Q Sbjct: 65 LDCVSINEVKLGLKAGFPKEKILFTPNCVDLAEIEEAMTFGVHINIDN----ISILEQFG 120 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G PI R+NP I A + KISTG + KFGI IHQ+ + + + G+ Sbjct: 121 NKYGNSYPILVRINPHIFAGGNYKISTGHIDSKFGISIHQVRHIER-VMKSTNLNVEGLH 179 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MH GS+I + F +A ++ +L + N++++D+G G I Y Sbjct: 180 MHTGSEIKDPDVFLQALDIML----ELSEHFPNLKYLDMGSGFKIPYQDSEEETDVKTLG 235 Query: 258 SLIHQYFGNL------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + + ++ EPG+FLV G L+ K IK++ FV ++ N Sbjct: 236 KKVEKVISEFSKSTGKKFELWFEPGKFLVGKSGYLLVKANVIKQTTATVFVGVNSGFNHL 295 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 +RP YD+YH I + NP G +VG ICET D A +RK+ R GD+L Sbjct: 296 IRPMFYDSYHMIENLSNPKG--AERIYTVVGNICET-DTFAWDRKLNEVREGDILAFHNA 352 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAYG S +NSRL E++ + H+IR R F++L+ Sbjct: 353 GAYGFEMSSNFNSRLKPAEVLFLDGKAHLIRKRDEFEDLLRNQI 396 >gi|25027833|ref|NP_737887.1| putative diaminopimelate decarboxylase [Corynebacterium efficiens YS-314] gi|259506224|ref|ZP_05749126.1| diaminopimelate decarboxylase [Corynebacterium efficiens YS-314] gi|24636795|sp|Q8RQM6|DCDA_COREF RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|20065737|dbj|BAB88825.1| diaminopimelate decarboxylase [Corynebacterium efficiens] gi|23493116|dbj|BAC18087.1| putative diaminopimelate decarboxylase [Corynebacterium efficiens YS-314] gi|259166201|gb|EEW50755.1| diaminopimelate decarboxylase [Corynebacterium efficiens YS-314] Length = 459 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 111/425 (26%), Positives = 184/425 (43%), Gaps = 18/425 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + V L LA TP + ++AF G D V YA KA ++ Sbjct: 37 EDGVVTVAGVPLPDLAEEYGTPLFVVDEDDFRARCRDMASAFGGPD-RVHYASKAFLSKT 95 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + + G LDI SE EL ALAA P ERI G K + +++ + ++S Sbjct: 96 VARWVDEEGLSLDIASENELGIALAADFPGERITAHGNNKDASFLRACVRNNLGHVVLDS 155 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAY 184 EL+ L+ A GK P+ RV P I A+TH+ I+T ++ KFG + Sbjct: 156 AQELELLDYIAAGEGKVQPVLIRVKPGIEAHTHEFIATSHEDQKFGFSLASGAAFDAARA 215 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLGIA 243 A +++ G+ H+GSQ+ + F A + + +L + G + +D+GGG GIA Sbjct: 216 AVNAENLELVGLHCHVGSQVFDAQGFSLAAERVLELYSRIHDELGVTLAELDLGGGYGIA 275 Query: 244 YHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKV-----I 291 Y + P + + A G +++EPGR + + V +V + Sbjct: 276 YTAAEEPLNVVEVAHDLLTAVGKTAAELGIEAPTVLVEPGRAIAGPSTVTVYEVGTIKDV 335 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 + + ++ +D M+D +RP LY A ++ + + + +VG CE+GD + Sbjct: 336 DVDDETTRRYISVDGGMSDNIRPALYGAEYDARVVSRFT-EGETTNTRVVGSHCESGDIL 394 Query: 352 ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 GDLL + TGAY S YN+ + V ++ R T ++ Sbjct: 395 INEATYPSDIHTGDLLALAATGAYCYAMSSRYNAFARPAVVSVRAGAAKLMLRRETLDDI 454 Query: 411 IELDS 415 + L+ Sbjct: 455 LSLEV 459 >gi|38233630|ref|NP_939397.1| diaminopimelate decarboxylase [Corynebacterium diphtheriae NCTC 13129] gi|38199890|emb|CAE49556.1| diaminopimelate decarboxylase [Corynebacterium diphtheriae] Length = 442 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 116/424 (27%), Positives = 190/424 (44%), Gaps = 18/424 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G + VSL +A TP + + AF G D V YA KA + + Sbjct: 20 GGDVSVAGVSLVSIAQEYGTPVFVVDEADFRSRCRDMAAAFGGAD-KVHYASKAFLTRRI 78 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LDI S GEL+ AL A P++RI G K + + + + ++S Sbjct: 79 ARWVEEEGLSLDIASHGELQVALRAGFPSQRITAHGNNKDRAFLQALVDARVGHVVIDSM 138 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 EL+ L + A + G + P+ RV P I A+TH+ I+T ++ KFG + + A A Sbjct: 139 VELERLEEIAGAAGIQQPVMVRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAYAAAARA 198 Query: 188 LPGVKISGV--DMHIGSQIDQIESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLGIAY 244 + + + H+GSQ+ + F A + + DL + R G +++ +D+GGG GIAY Sbjct: 199 ISSESLYLIGLHCHVGSQVFDAQGFSLAAQRVLDLYSRIHRELGVDLEQLDLGGGYGIAY 258 Query: 245 HSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKV-----IS 292 D P + A G +I++EPGR + + V +V + Sbjct: 259 TEDETPLDVAAVAQDLLKAVQSAADEIGISAPEILVEPGRAIAGPSTVTVYEVGTVKDVH 318 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + + ++ +D M+D +RP LY+A ++ I I + +VG CE+GD + Sbjct: 319 VTDRQTRRYLAVDGGMSDNIRPALYEAEYDARVINRNITGTP-ISSRVVGSHCESGDILI 377 Query: 353 LNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + R GDLL + TGAY S YN + V Q ++ R +L+ Sbjct: 378 NDAMLPDDIREGDLLALAATGAYCFAMSSRYNMMGRPAVVSVLDGQASVMVKRENIDDLL 437 Query: 412 ELDS 415 +LD Sbjct: 438 QLDV 441 >gi|120601731|ref|YP_966131.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris DP4] gi|120561960|gb|ABM27704.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris DP4] Length = 421 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 110/403 (27%), Positives = 181/403 (44%), Gaps = 20/403 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +L +P Y YS + + V Y+ KANSN A++ + G + Sbjct: 21 TELVETYGSPLYVYSEAILRQRCREMKALSSHPGFRVNYSAKANSNLALLHIIREEGLVV 80 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D +S GEL L A ++I++ + +E+ A+ G+ Sbjct: 81 DAMSPGELFMNLRAGFSPDQILYVCNNVSAEELGNAVSHGLLVSVDSLS-----QLDLYG 135 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + R NP I A HKK+ T KE KFG+ + ++G++ Sbjct: 136 EVNPGGRVMVRFNPGIGAGHHKKVVTAGKETKFGVDPA-SIDEVRTILARHNLTLAGINQ 194 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGS + ES+ +A + L L ++ ++ ID GGG GI YH A Sbjct: 195 HIGSLFLEPESYVEAARFLLTLAERFDD----VEVIDFGGGFGIPYHKYDSQRRLDLAAM 250 Query: 259 --------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + + + ++EPGR++VA+ G+L+ V S+K + +V D+ N Sbjct: 251 GAQFDDLISGWAHRRGYRGRFLVEPGRYVVAECGLLLGSVHSVKSNGANRYVGTDLGFNV 310 Query: 311 FMRPTLYDAYHEI-NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +YDA+H+I Y + L + +VG ICE+GD IA NR + GD+L + Sbjct: 311 LARPVMYDAHHDIEVYREDGEPSGLLLPQTVVGNICESGDIIAKNRPLPPVEEGDILGVL 370 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELI 411 GAYG V S +YN R+ E++++ + ++R R T +L+ Sbjct: 371 DAGAYGYVMSSSYNQRMRPAEVLIDLEGRPRLVRRRETLDDLV 413 >gi|315084726|gb|EFT56702.1| diaminopimelate decarboxylase [Propionibacterium acnes HL027PA2] Length = 476 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 117/429 (27%), Positives = 183/429 (42%), Gaps = 20/429 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V++ +L +P Y + + + F +AF D V YA KA + + Sbjct: 45 DGIVEVAGVTVTELLSQYGSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTI 102 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G LD + GEL AL + RI G K+IDE+ LAL G+ V+S Sbjct: 103 ASWIDQEGLFLDTCTGGELITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSL 162 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ + Q G A + RV + A+TH+ I+T ++ KFG I ++ A Sbjct: 163 DEIMRIEQLCRENGWHARVMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRC 222 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAY 244 + + GV HIGSQI F A + L +Q G + +D+GGG GIAY Sbjct: 223 HTSDAIDLLGVHSHIGSQIFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAY 282 Query: 245 HSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 S P + A + + I LEPGR +V + + V ++K Sbjct: 283 TSQDSPATVESLAGALREIVTLEARGRGMEVPHISLEPGRVIVGPTTMALYTVGTVKPVD 342 Query: 298 -----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + +V +D M+D +RP LY A + I N + + IVG CE GD + Sbjct: 343 LDTGAQRMYVSVDGGMSDNIRPALYAAEY-SAVIANRTSEVAPVLCRIVGKHCEAGDILV 401 Query: 353 LNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHII-RPRMTFQEL 410 + + PGD++ + GAY + YN + VN + ++ R +L Sbjct: 402 RDVYLPGDVSPGDVIAVPGAGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDL 461 Query: 411 IELDSIPAW 419 + LD P Sbjct: 462 LALDPGPIR 470 >gi|297811305|ref|XP_002873536.1| hypothetical protein ARALYDRAFT_488028 [Arabidopsis lyrata subsp. lyrata] gi|297319373|gb|EFH49795.1| hypothetical protein ARALYDRAFT_488028 [Arabidopsis lyrata subsp. lyrata] Length = 492 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 127/410 (30%), Positives = 217/410 (52%), Gaps = 5/410 (1%) Query: 8 EGSLHAENVSLEKLAHVVQT-PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L+ E ++ + V+ PFY YS I +N + A +G+ +++ YA+KAN+N Sbjct: 80 DGFLYCEGTKVQDIMESVERRPFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLK 139 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ L LG G +VS ELR AL A + +F+G GK ++++ LA Q G++ NV+S Sbjct: 140 ILEHLRSLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVF-VNVDS 198 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E +L + + + GK+ + R+NPD++ H ++TG K KFGI ++ Sbjct: 199 EFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVK 258 Query: 187 TLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-AY 244 P K+ G H+GS I +++ F A L+ + ++R G + ++++GGGLGI Y Sbjct: 259 AHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYY 318 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 H+ P+ D + + + + +I+EPGR L+A+ V V +K + K F+++ Sbjct: 319 HAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVI 378 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D +M + +RP+LYDAY I + + D+VGP+CE+ DF+ +R++ P G Sbjct: 379 DGSMAELIRPSLYDAYQHIELVSPTPPEAEVSKFDVVGPVCESADFLGKDRELPTPPQGA 438 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 L + GAY + TYN ++ PE V IR TF + + Sbjct: 439 CLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSITKIRHAETFDDHLRF 488 >gi|15231844|ref|NP_188056.1| diaminopimelate decarboxylase, putative / DAP carboxylase, putative [Arabidopsis thaliana] gi|75306310|sp|Q949X7|DCDA1_ARATH RecName: Full=Diaminopimelate decarboxylase 1, chloroplastic; Short=DAP decarboxylase 1; Flags: Precursor gi|18026845|gb|AAL55653.1|AF227913_1 diaminopimelate decarboxylase [Arabidopsis thaliana] gi|15292779|gb|AAK92758.1| putative diaminopimelate decarboxylase [Arabidopsis thaliana] gi|21594037|gb|AAM65955.1| putative diaminopimelate decarboxylase [Arabidopsis thaliana] gi|21689775|gb|AAM67531.1| putative diaminopimelate decarboxylase [Arabidopsis thaliana] gi|332641990|gb|AEE75511.1| diaminopimelate decarboxylase 1 [Arabidopsis thaliana] Length = 484 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 129/410 (31%), Positives = 219/410 (53%), Gaps = 5/410 (1%) Query: 8 EGSLHAENVSLEKLAHVVQT-PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L+ E +E + V+ PFY YS I +N + A +G+ +++ YA+KAN+N Sbjct: 72 DGFLYCEGTKVEDIMESVERRPFYLYSKPQITRNLEAYKEALEGVSSVIGYAIKANNNLK 131 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ L LG G +VS ELR AL A + +F+G GK+++++ LA Q G++ NV+S Sbjct: 132 ILEHLRSLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKSLEDLVLAAQEGVF-VNVDS 190 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E +L + + + GK+ + R+NPD++ H ++TG K KFGI ++ Sbjct: 191 EFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVK 250 Query: 187 TLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-AY 244 P K+ G H+GS I +++ F A L+ + ++R G + ++++GGGLGI Y Sbjct: 251 AHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYY 310 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 H+ P+ D + + + + +I+EPGR L+A+ V V +K + K F+++ Sbjct: 311 HAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVI 370 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D +M + +RP+LYDAY I + P + D+VGP+CE+ DF+ +R++ P G Sbjct: 371 DGSMAELIRPSLYDAYQHIELVSPPPAEAEVTKFDVVGPVCESADFLGKDRELPTPPQGA 430 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 L + GAY + TYN ++ PE V IR TF + + Sbjct: 431 GLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSITKIRHAETFDDHLRF 480 >gi|9279586|dbj|BAB01044.1| unnamed protein product [Arabidopsis thaliana] Length = 526 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 129/410 (31%), Positives = 219/410 (53%), Gaps = 5/410 (1%) Query: 8 EGSLHAENVSLEKLAHVVQT-PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L+ E +E + V+ PFY YS I +N + A +G+ +++ YA+KAN+N Sbjct: 114 DGFLYCEGTKVEDIMESVERRPFYLYSKPQITRNLEAYKEALEGVSSVIGYAIKANNNLK 173 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ L LG G +VS ELR AL A + +F+G GK+++++ LA Q G++ NV+S Sbjct: 174 ILEHLRSLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKSLEDLVLAAQEGVF-VNVDS 232 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E +L + + + GK+ + R+NPD++ H ++TG K KFGI ++ Sbjct: 233 EFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVK 292 Query: 187 TLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-AY 244 P K+ G H+GS I +++ F A L+ + ++R G + ++++GGGLGI Y Sbjct: 293 AHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYY 352 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 H+ P+ D + + + + +I+EPGR L+A+ V V +K + K F+++ Sbjct: 353 HAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVI 412 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D +M + +RP+LYDAY I + P + D+VGP+CE+ DF+ +R++ P G Sbjct: 413 DGSMAELIRPSLYDAYQHIELVSPPPAEAEVTKFDVVGPVCESADFLGKDRELPTPPQGA 472 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 L + GAY + TYN ++ PE V IR TF + + Sbjct: 473 GLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSITKIRHAETFDDHLRF 522 >gi|115445929|ref|NP_001046744.1| Os02g0440000 [Oryza sativa Japonica Group] gi|75294265|sp|Q6ZG77|DCDA_ORYSJ RecName: Full=Probable diaminopimelate decarboxylase, chloroplastic; Short=DAP decarboxylase; Flags: Precursor gi|46805542|dbj|BAD16980.1| putative diaminopimelate decarboxylase [Oryza sativa Japonica Group] gi|113536275|dbj|BAF08658.1| Os02g0440000 [Oryza sativa Japonica Group] gi|215695077|dbj|BAG90268.1| unnamed protein product [Oryza sativa Japonica Group] Length = 490 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 136/412 (33%), Positives = 230/412 (55%), Gaps = 10/412 (2%) Query: 8 EGSLHAENVSLEKL---AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 +G L+ E V +E A TPFY YS + +N+ + +A +G+ ++V YA+KAN+N Sbjct: 77 DGHLYCEGVRVEDAMGAAER--TPFYLYSKPQVVRNFTAYRDALEGLRSIVGYAVKANNN 134 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 V++ L LG G +VS ELR AL A R +F+G GKT++++ LA +SG++ N+ Sbjct: 135 LRVLQLLRELGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKTLEDLVLAAESGVF-VNI 193 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +SE +L+ + A GKK P+ R+NPD++ H ++TG K KFGI ++ Sbjct: 194 DSEFDLENIVTAARVAGKKVPVLLRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDS 253 Query: 185 AS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI- 242 + + GV H+GS I +++ F A L+ + ++R+ G ++++++GGGLGI Sbjct: 254 IKSYSNDITLVGVHCHLGSTITKVDIFRDAAGLMVNYVDEIRAQGFELEYLNIGGGLGID 313 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 +H+D P+ D + + + + +I+EPGR L+A+ V +V +K + K F+ Sbjct: 314 YHHTDAVLPTPMDLINTVRELVLSRDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFI 373 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 ++D +M + +RP+LY AY +V+P+ D DIVGP+CE+ DF+ +R++ P Sbjct: 374 VVDGSMAELIRPSLYGAYQH-IELVSPSPDAEVATFDIVGPVCESADFLGKDRELPTPDK 432 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 G L + GAY + TYN +L PE V + IR +F + ++ Sbjct: 433 GAGLVVHDAGAYCMSMASTYNLKLRPPEYWVEDDGSIAKIRRGESFDDYMKF 484 >gi|58579224|ref|YP_197436.1| diaminopimelate decarboxylase [Ehrlichia ruminantium str. Welgevonden] gi|58417850|emb|CAI27054.1| Diaminopimelate decarboxylase [Ehrlichia ruminantium str. Welgevonden] Length = 424 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 164/413 (39%), Positives = 247/413 (59%), Gaps = 5/413 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y L+ ENVS+ ++ + + TP YCYS AI+ NY+ F ++++CYA+K+N Sbjct: 12 FFHYKSNVLNIENVSVLEITNSIGTPVYCYSLNAIKNNYIQFKENLP-NNSIICYAVKSN 70 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN +++ L+ LGSG D VSEGE+RRA+ A + +IVFSGVGKT EI AL + I Sbjct: 71 SNLSILSLLSSLGSGADAVSEGEIRRAITAGISPNKIVFSGVGKTEQEISFALDNRILQL 130 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL+ +N+ + AP++ R+NP+INANT+ KI+TG K +KFGIP + ++ Sbjct: 131 NVESIEELQLINKISYHKNIIAPVSIRINPNINANTNDKITTGLKVNKFGIPEESLDQVF 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +L +KI G+ +HIGSQI + F ++ + + + +I +D+GGGLGI Sbjct: 191 NS--SLTNIKIIGISVHIGSQIANLGIFQNTIDKVKRIVKIFEQHNIHILRVDMGGGLGI 248 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + P+ +Y +L+ F II EPGR +V + GIL+ KV+ K + +K + Sbjct: 249 PYKNSDIFPTIQEYTNLLKNNFEKESYNIICEPGRAIVGNTGILLAKVLYHKSNYEKNHL 308 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +LD MND +RP LY+A E I + H+ DIVGPICE+ D A + I Sbjct: 309 VLDTGMNDLIRPALYNA--EHTIIPAVVSSKSHLSFDIVGPICESDDTFAYSYWINNVDN 366 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 +++ I GAYG+ S YNSR L+PE++VN +HIIR R T+ ++++ + Sbjct: 367 NEIVAICTVGAYGSSMSSNYNSRPLVPEVIVNQDNYHIIRHRQTYNDMLKDEV 419 >gi|57239261|ref|YP_180397.1| diaminopimelate decarboxylase [Ehrlichia ruminantium str. Welgevonden] gi|57161340|emb|CAH58263.1| putative diaminopimelate decarboxylase [Ehrlichia ruminantium str. Welgevonden] Length = 420 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 164/413 (39%), Positives = 247/413 (59%), Gaps = 5/413 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F Y L+ ENVS+ ++ + + TP YCYS AI+ NY+ F ++++CYA+K+N Sbjct: 8 FFHYKSNVLNIENVSVLEITNSIGTPVYCYSLNAIKNNYIQFKENLP-NNSIICYAVKSN 66 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN +++ L+ LGSG D VSEGE+RRA+ A + +IVFSGVGKT EI AL + I Sbjct: 67 SNLSILSLLSSLGSGADAVSEGEIRRAITAGISPNKIVFSGVGKTEQEISFALDNRILQL 126 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES EL+ +N+ + AP++ R+NP+INANT+ KI+TG K +KFGIP + ++ Sbjct: 127 NVESIEELQLINKISYHKNIIAPVSIRINPNINANTNDKITTGLKVNKFGIPEESLDQVF 186 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +L +KI G+ +HIGSQI + F ++ + + + +I +D+GGGLGI Sbjct: 187 NS--SLTNIKIIGISVHIGSQIANLGIFQNTIDKVKRIVKIFEQHNIHILRVDMGGGLGI 244 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y + P+ +Y +L+ F II EPGR +V + GIL+ KV+ K + +K + Sbjct: 245 PYKNSDIFPTIQEYTNLLKNNFEKESYNIICEPGRAIVGNTGILLAKVLYHKSNYEKNHL 304 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +LD MND +RP LY+A E I + H+ DIVGPICE+ D A + I Sbjct: 305 VLDTGMNDLIRPALYNA--EHTIIPAVVSSKSHLSFDIVGPICESDDTFAYSYWINNVDN 362 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 +++ I GAYG+ S YNSR L+PE++VN +HIIR R T+ ++++ + Sbjct: 363 NEIVAICTVGAYGSSMSSNYNSRPLVPEVIVNQDNYHIIRHRQTYNDMLKDEV 415 >gi|261749392|ref|YP_003257077.1| diaminopimelate decarboxylase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497484|gb|ACX83934.1| diaminopimelate decarboxylase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 409 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 134/403 (33%), Positives = 190/403 (47%), Gaps = 20/403 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L +L TP Y Y + IE+ Y+ AF + + YA KAN+N V+K L LGS Sbjct: 14 LMQLGKKYGTPLYIYDSRKIERQYIKMKKAFSEVTRLRINYACKANTNLNVLKFLQKLGS 73 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GLD VS E+ L A + I+F+ ++ E+ A+ G+ L ++ Sbjct: 74 GLDTVSIQEVELGLRAGFSPKHIIFTPNCVSLQEVKKAVDFGVKINIDNLS-----LLEQ 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + PI R+NP I A + KIS G + KFGI +QI L KI G Sbjct: 129 FGNENPDYPIGIRINPHIMAGGNYKISVGHVDSKFGISYYQIPHLKRILKNTGL-KIEGF 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MH GS I IE+F + K++ Q+ + +I +ID G G + Y + + Sbjct: 188 HMHAGSDISDIEAFLQGAKVIF----QIALDFPDIDYIDFGSGFKVPYTKNDIKTDLTFL 243 Query: 257 ASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + I + F + I EPG+FLV++ G + V IK + F +D N Sbjct: 244 SRSIIEKFESFCKVYGKKVTLIWEPGKFLVSESGSFLVHVNVIKHTTSTVFAGVDSGFNH 303 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 F+RP Y+AYH I I NP G +VG ICE+ D NR+IA R GD+L I+ Sbjct: 304 FIRPMFYEAYHCIENISNPNGRSRF--YTVVGYICES-DTFGFNRQIAEIREGDILCIKN 360 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 GAY S YNSR E+M+ Q +IR R T Q+L+ Sbjct: 361 AGAYCFSMSSNYNSRYRPSEVMIVKGQDFLIRRRETMQDLLRN 403 >gi|308177031|ref|YP_003916437.1| diaminopimelate decarboxylase [Arthrobacter arilaitensis Re117] gi|307744494|emb|CBT75466.1| diaminopimelate decarboxylase [Arthrobacter arilaitensis Re117] Length = 473 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 117/438 (26%), Positives = 183/438 (41%), Gaps = 32/438 (7%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------DTMVCYALKA 61 G L + +S+ KLA TP + F AFD V YA KA Sbjct: 34 GGELSVQGISVSKLAEEFGTPLFVLDENDFRARAAGFKTAFDEAFKDLCGGVDVYYAGKA 93 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 V + + G LD S GEL A AA VPA + G K+ EI A++ G+ Sbjct: 94 FLCTEVARWVTAEGLRLDTCSGGELAVASAAKVPAANLSLHGNNKSAAEITRAIEMGVGR 153 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI------ 175 ++S EL+ + A ++G+ A + R+ P ++A+TH+ I+T ++ KFG+ I Sbjct: 154 LVIDSLDELERVISIADAMGQTAQVMLRITPGVHASTHEAIATAHEDQKFGLSILEDGTG 213 Query: 176 -HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQH 233 A A + + G+ HIGSQI + E F + + L ++R + Sbjct: 214 SSPALRAVAGALAAKNINLLGLHAHIGSQIFEAEGFAMVARTMLGLLHKIREIHGVQLPE 273 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 +D+GGG GIAY S+ +P + + A + Q ++ LE R + + Sbjct: 274 LDLGGGYGIAYTSEDQPSTPAKLAGQMAQVVSETCKELELECPRISIEPGRAIAGPSTFT 333 Query: 294 KKSAD----------------KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH 337 A + ++ +D M+D RP LYDA + + I Sbjct: 334 LYEAGVRKDVQVEDASGTLHPRRYISVDGGMSDNPRPVLYDAQYTAVLASRMTQNDA-II 392 Query: 338 ADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS 396 + +VG CE+GD + + + GDLL + TGAY S YN + V Sbjct: 393 SRVVGKHCESGDIVVKDVYLPEDVAAGDLLAVPATGAYCWALSSNYNYLTRPAVVAVRDG 452 Query: 397 QFHIIRPRMTFQELIELD 414 Q +I R T +L+ D Sbjct: 453 QARLIVRRETETDLLARD 470 >gi|311740632|ref|ZP_07714459.1| diaminopimelate decarboxylase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304152|gb|EFQ80228.1| diaminopimelate decarboxylase [Corynebacterium pseudogenitalium ATCC 33035] Length = 445 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 117/427 (27%), Positives = 194/427 (45%), Gaps = 20/427 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + V L LA QTP Y + + AF G + V YA KA ++ Sbjct: 20 EDGVVTIAGVPLPDLAEEFQTPLYVFDEDDFRSRCQDMARAFGGPEH-VHYASKAFISKK 78 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 ++ + G LD S EL+ ALAA PAERI G K + + L + +G+ +++ Sbjct: 79 IVNWVNEEGLCLDAASLNELKIALAAEFPAERITTHGNNKDEEYLRLCVDAGVGHVVIDN 138 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E EL+ LN+ A GK P+ RV P ++A+TH+ I+T ++ KFGI + + A Sbjct: 139 ELELEELNRIAGEAGKVQPVMIRVKPGVDAHTHEFIATAHEDQKFGISLATGAAFAAAKR 198 Query: 187 TLPGVKIS--GVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIA 243 L + G+ H+GSQ+ E F A + + L +Q G ++ +D+GGG GI Sbjct: 199 CLEADNLHLSGLHCHVGSQVFNAEGFKLAAERVMGLYRQIYTELGVTLEELDLGGGFGIP 258 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKV------ 290 Y A + + +++EPGR LVA + V +V Sbjct: 259 YMPYEEALDIERVAGDMLGAVKDTAEELGIAAPFLLVEPGRSLVAGSAVTVYRVGTVKDV 318 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + ++ +D M+D +RP LY + ++ +VN D + + +VG CE+GD Sbjct: 319 ETGKSDLPLRRYISVDGGMSDNIRPALYGSAYD-VRVVNRFSDGEEVSSRVVGFHCESGD 377 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + ++ + GDL+ TG Y + S YN + + Q + R T + Sbjct: 378 ILLEDGELPNDIQSGDLIAFAATGGYQYMMSSRYNGAVRPAVVATRVGQTKPMLRRETIE 437 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 438 DLLSLEV 444 >gi|228475964|ref|ZP_04060672.1| diaminopimelate decarboxylase [Staphylococcus hominis SK119] gi|228269787|gb|EEK11267.1| diaminopimelate decarboxylase [Staphylococcus hominis SK119] Length = 421 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 121/425 (28%), Positives = 194/425 (45%), Gaps = 22/425 (5%) Query: 5 KYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKA 61 KY + G L SL+ LA TP Y I F NAF G+ + YA KA Sbjct: 4 KYNDYGELTMAGTSLKTLAQSFGTPTIVYDEDEIRNQMRRFHNAFQKSGLKYNISYASKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + ++K + LD+VSEGEL AL A RI F G KT EI AL+SG+ Sbjct: 64 FTCIQMVKLVQEENLQLDVVSEGELYTALEAKFDPSRIHFHGNNKTKREIQYALESGVGY 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F ++S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I ++ Sbjct: 124 FVIDSLEEIELIDRYA---SDTVNVVIRVNPGVEAHTHEFIQTGQEDSKFGLSIRHGLAI 180 Query: 182 YA--YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A + + G+ H+GSQI+ E+ + K++ + + ++ +++GGG Sbjct: 181 QAVEKVKASKHLHLKGIHFHVGSQIEGTEAMIETAKIVLNWLNEH---HIQVELLNLGGG 237 Query: 240 LGIAY-HSDHRPPSSSDYASLIHQYF------GNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y D P A + +I +EPGR +V + GI + +V + Sbjct: 238 FGIKYVEGDVSFPIEEGIAEITDAIKSESEKLNYDVPEIGIEPGRSIVGEAGITLYEVGT 297 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK + +D M+D +R LY A ++ + + I G +CE+GD I Sbjct: 298 IKDIPEVNKYVSIDGGMSDHIRTALYGAKYQALLVNRH--EEADETVTIAGKLCESGDII 355 Query: 352 ALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + + GD L I TGAY + YN P + + + R + ++L Sbjct: 356 IRDAMLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPPVFFLKDGKAREVIKRQSLRQL 415 Query: 411 IELDS 415 I D+ Sbjct: 416 IINDT 420 >gi|319951908|ref|YP_004163175.1| diaminopimelate decarboxylase [Cellulophaga algicola DSM 14237] gi|319420568|gb|ADV47677.1| diaminopimelate decarboxylase [Cellulophaga algicola DSM 14237] Length = 412 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 125/408 (30%), Positives = 193/408 (47%), Gaps = 20/408 (4%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAH 73 N L +A P Y Y + I + +NAF G+ + YA KA SN ++K + Sbjct: 3 NHDLLNIAKTYGDPVYVYDSEKIIAQFNRLTNAFSGVKKLKLNYAAKALSNITILKLMNS 62 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 LGSGLD VS E++ L A E I+F+ G +++EI+ A + G+ + Sbjct: 63 LGSGLDTVSIQEVQLGLLAGFKPENIIFTPNGVSLEEIEEAAKLGVRINIDNLS-----I 117 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 ++ S K P+ R+NP + A + IS G + KFGI IHQI L L + I Sbjct: 118 LEQFGSKFPKVPVCIRINPHVMAGGNSNISVGHIDSKFGISIHQIPHLLR-IVELTQMHI 176 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 +G+ MH GS I I+ F A ++L + N + ID G G + Y + Sbjct: 177 NGIHMHTGSDILDIDVFLYASEILF----ETAKNFKELDFIDFGSGFKVPYKEGDIETNI 232 Query: 254 SDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + S + + F + EPG+FLV++ G + KV +K++ F +D Sbjct: 233 EELGSKLTEKFNAFCKEYGKELTLAFEPGKFLVSEAGQFLAKVNVVKQTTSTVFASIDSG 292 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 N +RP LY +YH+I I N + + +VG ICET D A NR+I GD+L Sbjct: 293 FNHLIRPMLYGSYHQIENISN--PEGRERYYSVVGYICET-DTFASNRRITEISEGDILT 349 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GAY + YNSR E++ + + +IR R T +++I+ Sbjct: 350 FKNAGAYCFTMASNYNSRFRPAEVLWHKGEAVLIRERETLEDIIKNQV 397 >gi|34499212|ref|NP_903427.1| diaminopimelate decarboxylase [Chromobacterium violaceum ATCC 12472] gi|34105063|gb|AAQ61419.1| diaminopimelate decarboxylase [Chromobacterium violaceum ATCC 12472] Length = 409 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 119/428 (27%), Positives = 190/428 (44%), Gaps = 34/428 (7%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF + L +A TP + Y I + AFD + YA K Sbjct: 1 MHAFDNRQ---------LADIARQYGTPLWVYRADTIRERIAELK-AFD----TIRYAQK 46 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN +++ + G +D VS GE+ RALAA S + T D +D + + Sbjct: 47 ANSNTHILRLMRAEGVKVDAVSLGEIERALAAGYRGGGE-PSDIVFTADVLDRPTLAKVI 105 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 N+ + + ++ P+ R+NP +K +TG + K GI H Sbjct: 106 AENIPVNAGSIDMLRQLGEAAPGHPVWLRINPGFGHGHSQKTNTGGENSKHGIW-HGDLD 164 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 A +++ G+ MHIGS + + ++ + + + +I+ I GGGL Sbjct: 165 EALQAVRRFNLRLIGIHMHIGSGV----DYGHLEQVCGAMVELVARLECDIEAISAGGGL 220 Query: 241 GIAYHSDHRPPSSSDYASLIH------QYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y ++ Y L + ++ +EPGRFLVA+ G L+++V ++K Sbjct: 221 SIPYRDGDARIDTAHYFQLWDAARRRIEAHLGHPVQLEIEPGRFLVAEAGALLSEVRAVK 280 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL-HIHADIVGPICETGDFIAL 353 + FV++D ND MRP+LY +YH I+ + ++ + + GP+CE+GD Sbjct: 281 NMGSRHFVLVDAGFNDLMRPSLYGSYHRISLLDADGAEKTGAVDTVVAGPLCESGDVFTQ 340 Query: 354 N-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 R + + GDL+ GAYGA S YNSR L+ E +V+G IR R T Sbjct: 341 QEGGTVETRPLPPAQVGDLMVFHDAGAYGATMSSNYNSRPLLAEALVDGGAVRQIRRRQT 400 Query: 407 FQELIELD 414 EL+ L+ Sbjct: 401 IAELLALE 408 >gi|283777952|ref|YP_003368707.1| diaminopimelate decarboxylase [Pirellula staleyi DSM 6068] gi|283436405|gb|ADB14847.1| diaminopimelate decarboxylase [Pirellula staleyi DSM 6068] Length = 422 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 109/418 (26%), Positives = 181/418 (43%), Gaps = 24/418 (5%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 VS+ +A TP Y Y IE+ + FD ++ YA KA SN A++ + Sbjct: 13 EIAGVSVADIARDYGTPTYVYDAAIIEERIDDLAK-FD----VIRYAQKACSNIAILDLM 67 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G +D VS GE+ RA+AA + T D D + + ++ Sbjct: 68 RKKGVVVDAVSTGEIHRAMAAGYKP-GSKNHEIVYTADIFDRDALATVVKLDIPVNCGSP 126 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + ++ A + R+NP +K +TG ++ K GI Q+ A + Sbjct: 127 DMLDQLGAVKPGAHVTLRINPGFGHGHSQKTNTGGEQSKHGIWHEQLTDCLQKADRHGLM 186 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 I I ++ + + + G +I I GGGL I Y+ Sbjct: 187 I-----SGIHMHIGSGTDLEHLSQVCSAMERVVLEVGRSITTISAGGGLPIPYNDKQTYV 241 Query: 252 SSSDYASLIH------QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 Y L + + + +EPGR+LVA+ G LV+++ +IK+ + TF +LD Sbjct: 242 DLDQYFELWDASRKRLEAALGHKISLEIEPGRYLVAESGYLVSEIRAIKQMGNNTFYLLD 301 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIA 358 N+ RP LY +YH ++ + AG+R + GP+CE+GD R + Sbjct: 302 AGFNNLARPILYGSYHPMSIVPLDAGERADRDVVVGGPLCESGDIFTQEEGGYVCKRSLP 361 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 R G+ L +E+ GAYG V + YNS+ L E+++ H++R R T +LI + + Sbjct: 362 SARIGEYLVLERAGAYGFVMASNYNSKPLAAEVLIKNGTAHLVRERQTPADLIRGERL 419 >gi|86133354|ref|ZP_01051936.1| Diaminopimelate decarboxylase [Polaribacter sp. MED152] gi|85820217|gb|EAQ41364.1| Diaminopimelate decarboxylase [Polaribacter sp. MED152] Length = 414 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 123/409 (30%), Positives = 196/409 (47%), Gaps = 20/409 (4%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTL 71 EN L +LA+ +P Y Y T I Y +NAF + + + YA+KA SN ++K Sbjct: 1 MENTQLIELANKYGSPLYVYDTDKIASQYNRLTNAFSNVKNLKLNYAVKALSNVNILKFF 60 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 +LG+GLD VS E++ L + + I+++ G ++ EI+ + G+ Sbjct: 61 KNLGAGLDTVSYQEVQLGLTTGINPKNIIYTPNGVSLQEIEQVAKLGVQINIDNLS---- 116 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + + P+ R+NP I A + KIS G + KFGI IHQ+ + Sbjct: 117 -ILEIFGQKHPEIPVCVRINPHIMAGGNSKISVGHIDSKFGISIHQVPHIKRVVENTGM- 174 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 I+G+ MH GS I I++F +A +L D+ +Q ++ I ID G G + Y Sbjct: 175 NINGIHMHTGSDILDIDTFLRASDILFDVARQFKN----IDFIDFGSGFKVPYKEGDIST 230 Query: 252 SSSDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + + F + EPG+FLV++ G+ + KV +K++ F +D Sbjct: 231 DIEQLGIQLSERFNEFCSDYGKDITLMFEPGKFLVSEAGVFLAKVNVVKQTTSTVFAHVD 290 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 N +RP +YD+YH I I N + + +VG ICET D A NR+IA D+ Sbjct: 291 SGFNHLVRPMMYDSYHHITNISN--PEGRDRYYSVVGYICET-DTFASNRRIAEISEEDV 347 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 L GAY + YNSR L E+M+ + ++IR R T Q+++ Sbjct: 348 LCFHNAGAYCFSMASNYNSRYLPAEVMLVDGKDYLIRKRQTIQDILNNQ 396 >gi|314923475|gb|EFS87306.1| diaminopimelate decarboxylase [Propionibacterium acnes HL001PA1] gi|314966518|gb|EFT10617.1| diaminopimelate decarboxylase [Propionibacterium acnes HL082PA2] gi|315092962|gb|EFT64938.1| diaminopimelate decarboxylase [Propionibacterium acnes HL060PA1] gi|327327343|gb|EGE69119.1| diaminopimelate decarboxylase [Propionibacterium acnes HL103PA1] Length = 476 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 117/429 (27%), Positives = 182/429 (42%), Gaps = 20/429 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V++ +L +P Y + + + F +AF D V YA KA + + Sbjct: 45 DGIVEVAGVTVTELLSQYGSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTI 102 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G LD + GEL AL + RI G K+IDE+ LAL G+ V+S Sbjct: 103 ASWIDQEGLFLDTCTGGELITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSL 162 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ + Q G A + RV + A+TH+ I+T ++ KFG I ++ A Sbjct: 163 DEIMRIEQLCRENGWHARVMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRC 222 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAY 244 + + GV HIGSQI F A + L +Q G + +D+GGG GIAY Sbjct: 223 HTSDAIDLLGVHSHIGSQIFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAY 282 Query: 245 HSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 S P + A + + I LEPGR +V + + V ++K Sbjct: 283 TSQDSPATVESLAGALREIVTVEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVD 342 Query: 298 -----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + +V +D M+D +RP LY A + I N + + IVG CE GD + Sbjct: 343 LDTGAQRMYVSVDGGMSDNIRPALYAAEY-SAVIANRTSEVAPVLCRIVGKHCEAGDILV 401 Query: 353 LNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHII-RPRMTFQEL 410 + + PGD++ + GAY + YN + VN + ++ R L Sbjct: 402 RDVYLPGDVSPGDVIAVPGAGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDYL 461 Query: 411 IELDSIPAW 419 + LD P Sbjct: 462 LALDPGPIR 470 >gi|58040374|ref|YP_192338.1| diaminopimelate decarboxylase [Gluconobacter oxydans 621H] gi|58002788|gb|AAW61682.1| Diaminopimelate decarboxylase [Gluconobacter oxydans 621H] Length = 424 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 160/420 (38%), Positives = 247/420 (58%), Gaps = 6/420 (1%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKA 61 +G L E V L +A V TP + + + AF+ + + +A+K+ Sbjct: 1 MDARDG-LLFEGVPLHVIAAAVGTPCWITGAETLRRRAKALRAAFEARNLPVNMHFAMKS 59 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 +QA + L G G+DIVS GE++RAL A + IVFSGVGK+ E+ A++ I Sbjct: 60 QDHQATLTILRQCGYGVDIVSGGEMQRALHAGISPSGIVFSGVGKSDAELRAAVEHDIAQ 119 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 NVES EL L+ A + G+ A A RVNPD++A+TH KISTG+ DKFGI + +L Sbjct: 120 INVESVEELYRLDDIARACGRVARAALRVNPDVDADTHDKISTGRAGDKFGIEHRRAVAL 179 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A++L V++ G+ +H+GSQ+ F + + L D+ +++R+ GH ++ +D GGGLG Sbjct: 180 YGEAASLKNVRLVGLAVHLGSQMLTAGPFREGYSRLADMVREIRAAGHTVEAVDCGGGLG 239 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 I Y + PS A ++ + G+L ++ +EPGR+L A GIL+T+VI K+ + F Sbjct: 240 IRYRDEIA-PSPDMLAGVLAETLGDLDVRLSIEPGRWLSAPTGILLTRVI-ETKAGNPDF 297 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LP 360 V+LD AMND RP+LY+++H I + L DIVGP+CE+ D A +R + Sbjct: 298 VVLDAAMNDLARPSLYESWHGIMPVAPNGLTSLTKLWDIVGPVCESSDIFARDRALPADT 357 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 + GDL+ + TGAYG+V S TYN+R L +++++ ++ IIR R + ELI +++P WL Sbjct: 358 KRGDLIALLDTGAYGSVMSSTYNTRPLAAQVLIDNGKWEIIRQRQSVAELIAAETVPEWL 417 >gi|312194804|ref|YP_004014865.1| diaminopimelate decarboxylase [Frankia sp. EuI1c] gi|311226140|gb|ADP78995.1| diaminopimelate decarboxylase [Frankia sp. EuI1c] Length = 469 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 109/411 (26%), Positives = 182/411 (44%), Gaps = 14/411 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G L + +++LA TP + + F D V YA KA +AV Sbjct: 34 DGVLRVGGLRVDELADEFGTPAFFLDEDDFRARAQAWRAGFP--DGDVYYAGKAFLCRAV 91 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ + GEL A + P R++F G K+++E+ A+ G+ ++S Sbjct: 92 ARWVADEGLSLDVCTGGELAVAASVDFPPARLLFHGNNKSVEELRRAVAYGVGRIVLDSF 151 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 +E++ L A + G + + RV P + A+TH+ I+TG+++ KFG + +L A Sbjct: 152 AEIERLATVARAAGVRQRVLIRVTPGVEAHTHEYIATGQEDQKFGFSLASGAALDAIGRV 211 Query: 188 L---PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 L +++ G+ HIGSQI F A + L +R + +D+GGGLGIA Sbjct: 212 LAATDALELVGLHAHIGSQIFDTAGFGLAAHRMVGLLATVRDAHGVELPELDLGGGLGIA 271 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P +D A +H G ++ +EPGR +V I + +V ++K+ Sbjct: 272 YTGEDAPLPVADVADRLHTIVGKECASAGLAVPRLAVEPGRAMVGPTTITLYRVGTVKEL 331 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + T +V+ G H +VG CE+GD +A + Sbjct: 332 PGLRTYVSVDGGMSDNIRTALYDARYTARLVSRPGAAEHHVVTLVGKHCESGDVVAHDVS 391 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 + PGDL+ + TGAY + YN P + V ++ R T Sbjct: 392 LPADVAPGDLVAVPATGAYHRSMASNYNHVGRPPVVAVRAGAARVVVRRET 442 >gi|224284657|gb|ACN40061.1| unknown [Picea sitchensis] Length = 488 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 136/417 (32%), Positives = 223/417 (53%), Gaps = 15/417 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQT----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 K +G ++ E V L+ + T PFY YS I +NY + NA G+D+++ YA+K Sbjct: 73 KNRDGFMYCEGVRLQDVID---TMERRPFYLYSKPQITRNYEAYENALKGLDSIIGYAVK 129 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N +++ L LGSG +VS ELR AL A R +F+G GK +D++ LA G Sbjct: 130 ANNNLKILEHLRSLGSGAVLVSGNELRLALNAGFDPSRCIFNGNGKLLDDLVLAANEG-V 188 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 N++SE +L+ + + A KK + R+NPD++ H ++TG K KFGI ++ Sbjct: 189 LVNIDSEFDLENIVEAAKIAKKKVQVLLRINPDVDPEVHPYVATGNKNSKFGIRNEKLQW 248 Query: 181 LYAYASTLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 P + G H+GS I ++ F A L+ Q+R+ G I+++++GGG Sbjct: 249 FLDTVKAHPNELNLVGAHCHLGSTITKVNIFKDAAVLMIQYIDQIRAQGFEIKYLNIGGG 308 Query: 240 LGI-AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 LGI +H P+ D + + + + +I+EPGR LVA+ G+LV++V+ +K + + Sbjct: 309 LGIDYHHKGEVLPTPMDLINSVRKLVISGNLTLIVEPGRSLVANSGVLVSRVVGVKTNGN 368 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K F+++D +M + +RP+LY AY I I PA D+VGP+CE+ DF+ +R++ Sbjct: 369 KNFIVMDGSMAELIRPSLYGAYQHIELISPPAPKAKIQTFDVVGPVCESADFLGKDRELP 428 Query: 359 LPR--PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 P G + + GAY + TYN R+ E + + IR T ++ + Sbjct: 429 TPAMWAG--MVVHDAGAYCMSMASTYNLRMRPAEYWIQDDGSVKKIRHAETIEDHLR 483 >gi|163840173|ref|YP_001624578.1| diaminopimelate decarboxylase [Renibacterium salmoninarum ATCC 33209] gi|162953649|gb|ABY23164.1| diaminopimelate decarboxylase [Renibacterium salmoninarum ATCC 33209] Length = 483 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 115/443 (25%), Positives = 192/443 (43%), Gaps = 38/443 (8%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------DTMVCYALKAN 62 G L + VS++ LA +P + S T + F AF+ + YA K+ Sbjct: 39 GELAIDGVSVQHLAAQFGSPLFVVSETDFRRRAQEFYTAFNEAFTDICGGVDIYYAGKSF 98 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 V + + G LD S GE+ A A VP E++ G K+ EI AL+ G+ Sbjct: 99 LCTEVARWVMDEGLRLDTCSGGEMLVAQRAGVPGEKLGLHGNNKSDAEIRRALEIGVGRI 158 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI------- 175 +S E++ ++ A LG A + R+ P ++A+TH+ I+T ++ KFG+ + Sbjct: 159 VADSLPEIERIDSIAAGLGTIAKVMLRLTPGVHAHTHEFIATAHEDQKFGLSLATAGQDA 218 Query: 176 -------HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 A +++ G+ HIGSQI E F A + L + ++S Sbjct: 219 SSQGANVSPAEQAVLAAHAGKHIEMLGIHCHIGSQIFDAEGFAVAAQRLLGFSADMKSRH 278 Query: 229 -HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLV 280 + +D+GGG GIAY P +++ A+ + +I +EPGR +V Sbjct: 279 GIDFVELDLGGGYGIAYTEADTPRQAAEIANEMAAVVRAECAELGLTAPRISIEPGRAIV 338 Query: 281 ADVGILVTKV--------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 + +V + A++ ++ +D M+D RP LYDA + + N + Sbjct: 339 GPSTFTLYQVGTVKTVVVDTPSGPAERRYISVDGGMSDNPRPVLYDADY-TAILANRSSS 397 Query: 333 RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 + + +VG CE+GD + + + GDLL + TGAY V S YN + Sbjct: 398 ADAVLSRVVGKHCESGDIVVRDVYLPGDIIAGDLLAVPATGAYCWVLSSNYNYLPRPGVV 457 Query: 392 MVNGSQFHIIRPRMTFQELIELD 414 V G +I T ++L+ D Sbjct: 458 AVRGGTARVIVRAETEEDLLSRD 480 >gi|88802815|ref|ZP_01118342.1| diaminopimelate decarboxylase [Polaribacter irgensii 23-P] gi|88781673|gb|EAR12851.1| diaminopimelate decarboxylase [Polaribacter irgensii 23-P] Length = 422 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 127/423 (30%), Positives = 204/423 (48%), Gaps = 22/423 (5%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 FK + L E L +LA +P Y Y T IE Y +NAF + + + YA+KA Sbjct: 2 FKINQHPL--ERTQLLELATKYGSPLYVYDTDKIEAQYNRLTNAFSTVKNLKLNYAVKAL 59 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN ++K L +G+GLD VS E++ L + ++I+F+ G ++ EI+ + G+ Sbjct: 60 SNINILKFLQGIGAGLDTVSIQEVQLGLTTGIDPKKIIFTPNGVSLTEIEEVAKLGVQIN 119 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 + + K P+ R+NP I A + KIS G + KFGI IHQ+ + Sbjct: 120 IDNLS-----ILELFGQKHPKIPVCVRINPHIMAGGNSKISVGHIDSKFGISIHQVPHIK 174 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 I+G+ MH GS I I++F +A ++L D+ +Q + I ID G G + Sbjct: 175 RVVENTGM-NINGIHMHTGSDILDIDTFLRATEILFDVAKQFEN----IDFIDFGSGFKV 229 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKS 296 Y + + F + + + EPG+FLV++ G+ + KV +K++ Sbjct: 230 PYKEGDISTDIEQLGLQLSERFNDFCVEYGKEITLMFEPGKFLVSEAGVFLAKVNVVKQT 289 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 F +D N +RP +YD+YH I I N + + +VG ICET D NR+ Sbjct: 290 TSTVFAHVDSGFNHLVRPMMYDSYHHITNISNT--EGRDRYYSVVGYICET-DTFGSNRR 346 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 I+ D+L GAY + YNSR L E+MV+ + ++IR R T Q+++ + Sbjct: 347 ISEISEEDVLCFHNAGAYCFSMASNYNSRYLPAEVMVHRGEDYLIRKRQTIQDILHNQEV 406 Query: 417 PAW 419 + Sbjct: 407 VDF 409 >gi|325002813|ref|ZP_08123925.1| diaminopimelate decarboxylase [Pseudonocardia sp. P1] Length = 484 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 113/440 (25%), Positives = 180/440 (40%), Gaps = 34/440 (7%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G+L + LA TP + F+ AF V YA KA V Sbjct: 47 DGALRIAGTDVRDLAAAHGTPLFVLDEADFRSRCAEFAAAFGAS--AVHYAAKAFLCTEV 104 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ S GEL AL A P RI G K++ E+ A+ +G+ V+S Sbjct: 105 ARWVAQEGLSLDVCSGGELAVALRAGFPPPRIALHGNNKSVPELAAAVDAGVGGVVVDSF 164 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI---------HQI 178 E+ L A G AP+ R+ + A+TH+ I+T ++ KFG I Sbjct: 165 DEIARLEAVAAERGVTAPVLIRLTVGVEAHTHEYIATAHEDQKFGFSIAAGSAGEKDSAA 224 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-----QH 233 +++ G+ HIGSQI E F A + + + L + + Sbjct: 225 IEAARRVVAARHLELVGLHSHIGSQIFDTEGFEAAARRVVKVLADLHAEHGTENLAALRT 284 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGIL 286 +D+GGG+GIAY P S A + I +EPGR + + Sbjct: 285 LDLGGGIGIAYRPGEVPLSMPALAEELRAIVKRECAASGLDVPAIAVEPGRAIAGPGTVT 344 Query: 287 VTKVISIKKSA----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA------GDRLHI 336 V +V +IK + +V +D M+D +R +LYDA +++ + + G + Sbjct: 345 VYEVGTIKDVPLGGYSRRYVSVDGGMSDNIRTSLYDAEYDVRLVSRSSERDSVPGGDEPV 404 Query: 337 HADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 + +VG CE+GD + + + PGDLL + TGAY + YN + V Sbjct: 405 LSRVVGKHCESGDIVVRDCWLPADLAPGDLLAVAATGAYCYAMASGYNRLPRPAVVAVRE 464 Query: 396 SQFHIIRPRMTFQELIELDS 415 + R T ++ + Sbjct: 465 GADRTLLRRETLEDQFRFEV 484 >gi|94986995|ref|YP_594928.1| diaminopimelate decarboxylase [Lawsonia intracellularis PHE/MN1-00] gi|94731244|emb|CAJ54607.1| Diaminopimelate decarboxylase [Lawsonia intracellularis PHE/MN1-00] Length = 421 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 178/416 (42%), Gaps = 16/416 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 Y + S E+L + +P Y Y+ + I + + + V Y+ KAN+N Sbjct: 7 SYTDSINFFGKTSPEELIKIYGSPLYVYNESIIRQRCKEIKSLSSYPNFFVSYSAKANTN 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++ + G +D +S GE+ ++ I++ + +EI A+ + I Sbjct: 67 PTLLSIIKDEGCLVDAMSPGEVYLHKKVGFKSDEILYVCNNISAEEIQYAIDNKILLSID 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 + L I R+NP I HKK+ T KE KFGI Q + Sbjct: 127 SLS-----QLETYGKLNPGGKIMVRINPGIGTGHHKKVITAGKETKFGINTEQFSDVKKI 181 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 T + + G++ HIGS +++ + L ++ ID GGG GI Y Sbjct: 182 VDTYQLM-LVGINQHIGSLFLDPQNYLDSIAFLLQFIDNNPWIFEQLEIIDFGGGFGIPY 240 Query: 245 HSDHRPPS--------SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 P + + + + +EPGR+++A+ GIL+ V +K + Sbjct: 241 KKYEEQPRLDLKKMSEQFNTKIMDWVASTGYKGRFYIEPGRYIIAESGILLGSVHVVKYN 300 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH-IHADIVGPICETGDFIALNR 355 ++ DV N MRP LYDAYHEI L I +VG ICE+GD IA R Sbjct: 301 GPIRYIGTDVGFNVLMRPVLYDAYHEIEVYRKNGTPDLQLIPQTVVGNICESGDIIANKR 360 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQEL 410 + L + GD++ I GAYG V S YN R E+++ + +IR R T +++ Sbjct: 361 PLPLIQEGDIIGILDVGAYGFVMSSNYNQRPRPAEVLIQQNGEPKLIRKRETIEDM 416 >gi|221065369|ref|ZP_03541474.1| diaminopimelate decarboxylase [Comamonas testosteroni KF-1] gi|220710392|gb|EED65760.1| diaminopimelate decarboxylase [Comamonas testosteroni KF-1] Length = 427 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 118/408 (28%), Positives = 185/408 (45%), Gaps = 20/408 (4%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA TP + Y I + AFD V +A KA SN ++K + G +D Sbjct: 25 LADQYGTPLWVYDAATIRERIAQLK-AFD----TVRFAQKACSNIHILKLMREQGVKVDA 79 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RALAA + + T D +D A + + V + + + ++ Sbjct: 80 VSRGEVLRALAAGFTPGFGEPADIVFTADVMDEATLATVVEHKVPVNAGSIDMLHQLAAV 139 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + + R+NP K +TG + K GI H A G+ ++G+ MHI Sbjct: 140 SRGHHVWLRINPGFGHGHSNKTNTGGEHSKHGIW-HSELEAALQAIKTGGLVLAGLHMHI 198 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH------SDHRPPSSS 254 GS + + + L ++ ++ G ++ I GGGL I Y Sbjct: 199 GSGV-DYGHLQEVCGAMVKLVERTKAAGVDLHAISAGGGLSIPYRAGDATIDTDHYHGLW 257 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 D A + + + LEPGRFLVA+ G+L+ V + K + FV++D N+ MRP Sbjct: 258 DAARQQAEAIVGHKLGLELEPGRFLVAESGVLLGTVRATKNAGSNHFVLVDTGFNELMRP 317 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGDLLY 367 ++Y +YH + + + + GP+CE+GD R +A GDLL Sbjct: 318 SMYGSYHGMEVLRRDGQSLPAQDSVVAGPLCESGDVFTQGDGGVVLPRSLAGASVGDLLV 377 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 I TGAYG+ S YN+R L E++V+G+Q +IR R T +EL+ L+ Sbjct: 378 IHDTGAYGSSMSSNYNTRPLAAEVLVDGAQSQLIRRRQTVEELLALEI 425 >gi|171320534|ref|ZP_02909560.1| diaminopimelate decarboxylase [Burkholderia ambifaria MEX-5] gi|171094227|gb|EDT39308.1| diaminopimelate decarboxylase [Burkholderia ambifaria MEX-5] Length = 412 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 125/419 (29%), Positives = 183/419 (43%), Gaps = 35/419 (8%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + Sbjct: 8 LATLAQQYGTPLWVYDADVIRDRIAQLRQ-FD----VIRYAQKANSNLHILKLMRDERVC 62 Query: 78 LDIVSEGELRRALAAPV----PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 +D VS GE+ R+LAA E +VF+ + L+ G+ + Sbjct: 63 VDAVSLGEIERSLAAGFSPAGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDM----- 117 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 R + RVNP K +TG + K GI I + K+ Sbjct: 118 LARVGEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGL-KL 176 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G+ MHIGS + + ++ + + S GH+I+ I GGGL I Y Sbjct: 177 VGIHMHIGSGV----DYGHLSQVCDAMVDLVASLGHDIEAISAGGGLSIPYRDGEPRVDV 232 Query: 254 SDYASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 Y S +I +EPGRFLVA+ G LVT+V ++ + FV++D Sbjct: 233 GHYFSQWDAARKRIERHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAG 292 Query: 308 MNDFMRPTLYDAYHEINYIVNP---AGDRLHIHADIVGPICETGDFIALN-------RKI 357 ND MRP++Y +YH ++ R + I GP+CE+GD + RK+ Sbjct: 293 FNDLMRPSMYGSYHAVSVHAPDGALPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKL 352 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 A P+ GDLL++ GAYGA S YNSR L PE++V+ +IR R T EL+ L++ Sbjct: 353 AQPQIGDLLFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLALETF 411 >gi|299531856|ref|ZP_07045257.1| diaminopimelate decarboxylase [Comamonas testosteroni S44] gi|298720176|gb|EFI61132.1| diaminopimelate decarboxylase [Comamonas testosteroni S44] Length = 415 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 119/408 (29%), Positives = 184/408 (45%), Gaps = 20/408 (4%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA TP + Y I + AFD V +A KA SN ++K + G +D Sbjct: 13 LADQYGTPLWVYDAATIRERIAQLK-AFD----TVRFAQKACSNIHILKLMREQGVKVDA 67 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RALAA + + T D +D A + + V + + + ++ Sbjct: 68 VSRGEVLRALAAGFTPGFGEPADIVFTADVMDEATLATVVEHQVPVNAGSIDMLHQLAAV 127 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 K + R+NP K +TG + K GI H A G+ ++G+ MHI Sbjct: 128 SKGHHVWLRINPGFGHGHSNKTNTGGEHSKHGIW-HSELEAALDAIKAGGLVLAGLHMHI 186 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 GS + + + L ++ ++ G ++ I GGGL I Y ++ Y L Sbjct: 187 GSGV-DYGHLQEVCGAMVKLVERTKAAGVDLHAISAGGGLSIPYKQGDATIDTNHYHGLW 245 Query: 261 HQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + LEPGRFLVA+ G+L+ V + K + FV++D N+ MRP Sbjct: 246 DAARKQAEGIVGHSLGLELEPGRFLVAESGVLLGTVRATKNAGSNHFVLVDTGFNELMRP 305 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGDLLY 367 ++Y +YH + + + + GP+CE+GD R +A GDLL Sbjct: 306 SMYGSYHGMEVLRRDGQSLPAQDSVVAGPLCESGDVFTQGDGGVVLPRALAGASVGDLLV 365 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 I TGAYG+ S YN+R L E++V+G Q +IR R T +EL+ L+ Sbjct: 366 IHDTGAYGSSMSSNYNTRPLAAEVLVDGEQSQLIRRRQTVEELLALEI 413 >gi|148259756|ref|YP_001233883.1| diaminopimelate decarboxylase [Acidiphilium cryptum JF-5] gi|146401437|gb|ABQ29964.1| diaminopimelate decarboxylase [Acidiphilium cryptum JF-5] Length = 438 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 155/419 (36%), Positives = 227/419 (54%), Gaps = 5/419 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALK 60 +F +G L ++V L +A TP + YS IE AF G + YA+K Sbjct: 22 SFHAMDG-LCLDDVPLASIAAAHGTPTWVYSAATIEGRLAALRAAFAGEGLAPAIRYAVK 80 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN + A++ + G+G D+ S GE RA AA + +VFSGVGK DE+ AL +GI Sbjct: 81 ANDHLAILGLVRAGGAGADVTSAGEFARAEAAGIAPGAMVFSGVGKREDELRRALAAGIG 140 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 NVES EL+ ++ A ++G AP+A RVNPD+ A H KISTG+K DKFGI + Sbjct: 141 QLNVESAEELEMISGIAAAMGVAAPVALRVNPDVAAGGHDKISTGRKGDKFGIGFDDAGA 200 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY A+ LPG++ G HIGSQI +F A++ + L LR G ++ +D+GGG Sbjct: 201 LYRRAAALPGIEAVGFSTHIGSQIFAPAAFEAAYRRVLGLIGALRGEGLAVRRLDLGGGF 260 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y P ++ A+++ + G ++I+EPGR+LV G+L+ +V +K++ + Sbjct: 261 GIPYDDGTAFPFAAQ-AAMVRRVLGGHDLELIVEPGRWLVGPAGVLLARVTLVKRAGAER 319 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV+LD MND +RP LY A H I + A++VGP+CE+ D + + Sbjct: 320 FVVLDAGMNDLIRPALYGARHGIVPVGAADAAGAPAPAEVVGPVCESSDRFGTH-DLPEL 378 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PG L+ + GAYGA S TYN R ++M+ +IR R T EL + +P Sbjct: 379 APGALVALLDAGAYGATMSSTYNGRPFAAQVMIADGAPQLIRRRQTLDELWRDEIVPPR 437 >gi|152965219|ref|YP_001361003.1| diaminopimelate decarboxylase [Kineococcus radiotolerans SRS30216] gi|151359736|gb|ABS02739.1| diaminopimelate decarboxylase [Kineococcus radiotolerans SRS30216] Length = 463 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 117/428 (27%), Positives = 193/428 (45%), Gaps = 23/428 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------DTMVCYALKAN 62 G+LH V++ LA TP + + F +AF V YA KA Sbjct: 35 GALHVGGVAVADLAATYGTPLFVVDELDFRTRAVAFRDAFADAFADLCGGADVYYASKAF 94 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + V + +A G LD S GEL L VP RI G K+ EI AL+ G+ Sbjct: 95 TATGVTRWIAADGLHLDTASAGELELGLRGGVPPARIALHGNNKSRREIVRALEVGVGRI 154 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V+S +E+ + A G AP+ RV + A+TH+ I+T ++ KFG+ + + Sbjct: 155 VVDSPAEIDVIADLARERGVVAPVMLRVTVGVEAHTHQYIATAHEDQKFGVSLASGQAEA 214 Query: 183 AYASTLPGVKIS--GVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGG 239 A A L ++ G+ HIGSQI + F + + L +L + R +G + +D+GGG Sbjct: 215 AVARILARPELRLLGLHSHIGSQIFDLGGFEVSARRLLELHHKVERDHGVELPELDLGGG 274 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVIS 292 G+AY S+ P + ++ A + + ++ +EPGR + A + +V + Sbjct: 275 YGVAYTSEDAPLAPTEIAGRLAEIVARECLVQGIAVPRVSVEPGRAIAAPSTFTLYEVGT 334 Query: 293 IKKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 K+ + +V +D M+D +R LY A + + + A + + +VG CE+ Sbjct: 335 TKEVELDGGTRRRYVSVDGGMSDNIRTALYGADY-SATVASRASTAPGVLSRVVGKHCES 393 Query: 348 GDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 GD + + + GDLL + TGAY + YN + V ++ R T Sbjct: 394 GDVVVRDEFLPEDLGGGDLLAVPGTGAYCRSMASNYNQLPRPGVVAVRDGSATVLVRRET 453 Query: 407 FQELIELD 414 ++L+ LD Sbjct: 454 PEDLLALD 461 >gi|115358995|ref|YP_776133.1| diaminopimelate decarboxylase [Burkholderia ambifaria AMMD] gi|115284283|gb|ABI89799.1| diaminopimelate decarboxylase [Burkholderia ambifaria AMMD] Length = 412 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 125/419 (29%), Positives = 183/419 (43%), Gaps = 35/419 (8%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + Sbjct: 8 LATLAQQYGTPLWVYDADVIRDRIAQLRQ-FD----VIRYAQKANSNLHILKLMRDERVC 62 Query: 78 LDIVSEGELRRALAAPV----PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 +D VS GE+ R+LAA E +VF+ + L+ G+ + Sbjct: 63 VDAVSLGEIERSLAAGFSPAGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDM----- 117 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 R + RVNP K +TG + K GI I + K+ Sbjct: 118 LARVGEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGL-KL 176 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G+ MHIGS + + ++ + + S GH+I+ I GGGL I Y Sbjct: 177 VGIHMHIGSGV----DYGHLSQVCDAMVDLVTSLGHDIEAISAGGGLSIPYRDGEPRVDV 232 Query: 254 SDYASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 S Y S +I +EPGRFLVA+ G LVT+V ++ FV++D Sbjct: 233 SHYFSQWDAARKRIERHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNHRPKHDFVLIDAG 292 Query: 308 MNDFMRPTLYDAYHEINYIVNP---AGDRLHIHADIVGPICETGDFIALN-------RKI 357 ND MRP++Y +YH ++ R + I GP+CE+GD + RK+ Sbjct: 293 FNDLMRPSMYGSYHAVSVHAPDGALPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKL 352 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 A P+ GDLL++ GAYGA S YNSR L PE++++ +IR R T EL+ L++ Sbjct: 353 AQPQIGDLLFLHDAGAYGASMSSNYNSRPLAPEVLIDRGTPRLIRRRQTIGELLALETF 411 >gi|162453832|ref|YP_001616199.1| hypothetical protein sce5556 [Sorangium cellulosum 'So ce 56'] gi|161164414|emb|CAN95719.1| unnamed protein product [Sorangium cellulosum 'So ce 56'] Length = 435 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 110/426 (25%), Positives = 175/426 (41%), Gaps = 22/426 (5%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAV 67 + +S+ LA TP Y Y I +N+ + A G + V YA+KA +N + Sbjct: 5 EITIGGISVRDLAEQYGTPLYAYDAERIRENFRRLTRALRGNYPEVSVFYAIKACNNLEI 64 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 K L GSG+D S E+R A A + ERI+++G + +++ L++G+ + Sbjct: 65 AKLLVDEGSGVDAASPNEIRLAQALGLSGERIIYTGNSLSDEDLAAGLRAGVNFNVDDHG 124 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + T KFGI + Y A Sbjct: 125 ILKRLFSIGKPRCMSFR----INPSGEDIATPDLKPFAGPSAKFGIHPRHVEEAYRTALE 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 ++ M H KLL + R G ++ +D+GGGLGI Y + Sbjct: 181 NGVERLGVHMMPHSQAHKPENFAHVTGKLLDLIGPVARKLGFDLAFVDIGGGLGIPYRRE 240 Query: 248 HRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADKT 300 P A I ++++EPGR+ V D G ++ +VISIK KT Sbjct: 241 QPPLDVEAVARGIAAMVRKKCAEHGLKEPRLVMEPGRYFVGDAGYVLGRVISIK-QGYKT 299 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-L 359 + D++MN RP +Y AYHE+ G +CE D R+ Sbjct: 300 IIGTDISMNTMARPVMYGAYHEVRINGRGGQTAPMAMT---GQVCENTDMWIPEREFPAD 356 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL----DS 415 GD++ + GAYG V S YN RL E++++G + +IR R TF++++ D Sbjct: 357 VAEGDVVVLMDAGAYGHVMSYDYNGRLRPAEVLIDGGKSRLIRRRDTFEDMVSRMCLSDD 416 Query: 416 IPAWLQ 421 I L+ Sbjct: 417 IKERLR 422 >gi|218886112|ref|YP_002435433.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757066|gb|ACL07965.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 421 Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 106/420 (25%), Positives = 182/420 (43%), Gaps = 20/420 (4%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 Y + + E+LA +P Y YS + K V Y+ KAN+N Sbjct: 7 TYTDAVGFFGRTTPEELAAAFGSPLYVYSEALLRKRCRDMKALSSHPGFFVNYSAKANTN 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++++ + G +D +S GE+ AA ++I++ + E+ A+ G+ Sbjct: 67 LSLLRIVREEGLVVDAMSPGEIHVNKAAGFTPDQILYVCNNVSEAELANAVSHGLLVSVD 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ-IHSLYA 183 + + + + R NP I A H+K+ T K KFG+ + + Sbjct: 127 SLS-----QLETLGRVNRGGKVMVRFNPGIGAGHHQKVVTAGKATKFGVDPSEASLAELR 181 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + ++G++ HIGS + E + A L + ++ + ++ ID GGG GI Sbjct: 182 AILARHDMTLAGINQHIGSLFLEPEGYVAAADFLLSVAEKFDT----VEVIDFGGGFGIP 237 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQC--------KIILEPGRFLVADVGILVTKVISIKK 295 Y P A+ + + +EPGR++VA+ G+L+ V + K Sbjct: 238 YRKYEDQPRLDLAATAERLHALISGWSERTGYKGRFYIEPGRYVVAECGLLLGTVHATKN 297 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNP-AGDRLHIHADIVGPICETGDFIALN 354 + +V D+ N RP +YDA+H+I N D +VG ICE+GD +A Sbjct: 298 NGPTRYVGTDLGFNVLARPVMYDAHHDIEVYRNNGTPDAALHPQTVVGNICESGDIMARE 357 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIEL 413 R++ + GD+L + GAYG S TYN RL E+++ + +IR R +L+ L Sbjct: 358 RQLPAIQEGDILGVLDAGAYGYAMSSTYNQRLRPAEVLIGLDGEPRLIRRREELADLMAL 417 >gi|170699414|ref|ZP_02890459.1| diaminopimelate decarboxylase [Burkholderia ambifaria IOP40-10] gi|170135670|gb|EDT03953.1| diaminopimelate decarboxylase [Burkholderia ambifaria IOP40-10] Length = 412 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 124/419 (29%), Positives = 181/419 (43%), Gaps = 35/419 (8%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + Sbjct: 8 LATLAQQYGTPLWVYDADVIRDRIAQLRQ-FD----VIRYAQKANSNLHILKLMRDERVC 62 Query: 78 LDIVSEGELRRALAAPV----PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 +D VS GE+ R+LAA E +VF+ + L+ G+ + Sbjct: 63 VDAVSLGEIERSLAAGFSPAGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDM----- 117 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 R + RVNP K +TG + K GI I + K+ Sbjct: 118 LARVGEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGL-KL 176 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G+ MHIGS + + ++ + + S GH+I+ I GGGL I Y Sbjct: 177 VGIHMHIGSGV----DYGHLSQVCDAMVDLVTSLGHDIEAISAGGGLSIPYRDGEPRVDV 232 Query: 254 SDYASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 Y S +I +EPGRFLVA+ G LVT+V ++ FV++D Sbjct: 233 GHYFSQWDAARKRIERHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNHRPKHDFVLIDAG 292 Query: 308 MNDFMRPTLYDAYHEINYIVNP---AGDRLHIHADIVGPICETGDFIALN-------RKI 357 ND MRP++Y +YH ++ R + I GP+CE+GD + RK+ Sbjct: 293 FNDLMRPSMYGSYHAVSVHAPDGALPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKL 352 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 A P+ GD L++ GAYGA S YNSR L PE++V+ +IR R T EL+ L++ Sbjct: 353 AQPQIGDRLFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLALETF 411 >gi|260771626|ref|ZP_05880546.1| diaminopimelate decarboxylase [Vibrio metschnikovii CIP 69.14] gi|260613403|gb|EEX38602.1| diaminopimelate decarboxylase [Vibrio metschnikovii CIP 69.14] Length = 358 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 160/358 (44%), Positives = 221/358 (61%), Gaps = 3/358 (0%) Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KANSN V+ TLA LGSG DIVS GEL R LAA ++VFSGVGKT E+ AL Sbjct: 1 MKANSNLGVLNTLARLGSGFDIVSGGELERVLAAGGNPSKVVFSGVGKTAAEMKRALTLQ 60 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I CFNVESE EL LNQ A LG AP++ R+NPD++A+TH ISTG +++KFGI + Sbjct: 61 IKCFNVESEPELLLLNQVAGELGVTAPVSLRINPDVDAHTHPYISTGLRDNKFGIAFERA 120 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 +Y A++L + + G+D HIGSQ+ +E F A L L QL + G I H+DVGG Sbjct: 121 PEVYRLANSLEHINVRGIDCHIGSQLTALEPFIDATDRLLALIDQLHAEGIAIAHLDVGG 180 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 GLG+ Y + P +L+ + + ++I EPGR + A+ G+L+T+V +K + Sbjct: 181 GLGVVYRDERPPQPGDYAKALLARLHNHPHLELIFEPGRAIAANAGVLLTRVEFLKHTEH 240 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K F I+D AMND MRP LY A+ +I + AG+ + D+VGP+CETGDF+ +R + Sbjct: 241 KNFAIIDAAMNDLMRPALYQAWQDIVPVAPRAGEA--VTYDLVGPVCETGDFLGKDRAL- 297 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL + GAYG V S YN+R E+MV+G + H++R R L L++I Sbjct: 298 VLEQGDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGDKIHLVRQREALASLWALETI 355 >gi|302333012|gb|ADL23205.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus JKD6159] Length = 421 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 190/422 (45%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHRAFKESGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 LQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENKIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E+ +++ A + RVNP + A+TH+ I TG+++ KFG+ I + A Sbjct: 127 DSLEEIDLIDRYANDTV---QVVIRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKTAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ + +++GGG GI Sbjct: 184 EKVLQSKHLKLKGVHCHIGSQIEGTEAFIETAKIVLHWLKEH---NIQVDLLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y I ++ +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIEKGIKEITDAIKSEVQLLGIETPELGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPGVNKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEDSDDTVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY S YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMSSNYNQMQKPSVFFLKDGKAREVVKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|295700590|ref|YP_003608483.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1002] gi|295439803|gb|ADG18972.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1002] Length = 422 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 177/416 (42%), Gaps = 29/416 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I + + FD + YA KA SN ++K + G Sbjct: 13 LADLARQHGTPLWVYDADTIRQRIAQLRS-FD----TIRYAHKACSNVHILKLMRDEGVM 67 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES----ELKTL 133 +D VS GEL R+ AA A+ + D+ + + E + L L Sbjct: 68 VDAVSLGELARSFAAGFTAQPASHDAAEGVVFTADVLDHATLATVLEERITVNAGSLDML 127 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 ++ + + R+NP K +TG + K GI + +K+ Sbjct: 128 DRLGRHASEGHRVWLRINPGFGHGHSSKTNTGGEHSKHGIWRDDLPRALELVRRY-RLKL 186 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G+ MHIGS + + K+ + + +I+ I GGGL + Y + Sbjct: 187 VGLHMHIGSGV----DYAHLAKVCDAMVDAVSQLDQDIEAISAGGGLSVPYRDGEPSVDT 242 Query: 254 SDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + Y L + ++ +EPGRFLVA G+L+ +V ++ + + F +LD Sbjct: 243 AHYFRLWDDARRRIEAQVGHRVRLEIEPGRFLVAQAGVLIAEVHALNRRPSRQFALLDAG 302 Query: 308 MNDFMRPTLYDAYHEINYIVNP--AGDRLHIHADIVGPICETGDFIAL-------NRKIA 358 ND +RP+ Y ++HEI+ + D + GP+CE GD +R + Sbjct: 303 FNDLVRPSFYGSHHEISVLRRDGTPSDAPIGSFSVAGPLCEAGDVFTQVEGGVVTSRSMP 362 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 P+ GDLL GAYGA S YNSR L PE+++ +IR R +ELI L+ Sbjct: 363 APQVGDLLVFHDAGAYGASMSSNYNSRPLAPEVLIERGNARLIRRRQRIEELIALE 418 >gi|319441083|ref|ZP_07990239.1| hypothetical protein CvarD4_04872 [Corynebacterium variabile DSM 44702] Length = 476 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 113/439 (25%), Positives = 193/439 (43%), Gaps = 26/439 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + V + +L TP + + AF G V YA KA + V Sbjct: 42 GEIELGGVPVTELVAEHGTPVFVMDEADFRGRCRRLAAAFGG-GEHVHYASKAFLSVTVA 100 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + +A G LD+ S+GEL AL A PAERI G K+ D + +A+++G+ ++S Sbjct: 101 RWVADEGLALDVASQGELEIALTAGFPAERITVHGNNKSEDFLAVAVRAGVELIVIDSVE 160 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E+ L + A LG + RV P ++ +TH+ I+T ++ KFG + + A + + Sbjct: 161 EIGRLAKVASGLGVTQDVLVRVKPGVHVDTHEFIATSHEDQKFGFSLASGSAERACLAVV 220 Query: 189 P--GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-------QLRSNGHNIQHIDVGGG 239 G+++ G+ H+GSQ+ + + F A L L + + +D+GGG Sbjct: 221 DAAGMRLRGLHCHVGSQVFEADGFGLAADRLLGLWARLIDELGEESDEATALNTLDLGGG 280 Query: 240 LGIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-- 290 GIAY D A G + +EPGR + + + V Sbjct: 281 YGIAYTPDQEELDVETVASDLLRRVRQTAVERGLDAPVLNVEPGRAIAGPSTVTLYAVGT 340 Query: 291 ---ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 + + ++ +D M+D +RP LY A ++ N + +VG CE+ Sbjct: 341 VKDVHTSDDTVRRYISVDGGMSDNIRPALYQAEYDCRL-ANRHAIGTLVPTRVVGSHCES 399 Query: 348 GDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 GD + + + GD+L + TGAY + + YN P ++V Q ++ R T Sbjct: 400 GDILINDALMPDDIAAGDILAVPATGAYCYMMASRYNMLTRPPVVIVGDGQSRVMIRRET 459 Query: 407 FQELIELDSIPAWLQKTPK 425 +++ L++I L+KTP+ Sbjct: 460 VADVLALENID--LEKTPR 476 >gi|258423663|ref|ZP_05686551.1| diaminopimelate decarboxylase [Staphylococcus aureus A9635] gi|257846161|gb|EEV70187.1| diaminopimelate decarboxylase [Staphylococcus aureus A9635] Length = 421 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 193/422 (45%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + +AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHHAFKESGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 LQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENKIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E+ +++ A + RVNP + A+TH+ I TG+++ KFG+ I + A Sbjct: 127 DSLEEIDLIDRYANDTV---QVVIRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKTAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ + +++GGG GI Sbjct: 184 EKVLQSKHLKLKGVHCHIGSQIEGTEAFIETAKIVLHWLKEH---NIQVDLLNLGGGFGI 240 Query: 243 AYHSDHRPPSS-------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y +D Q ++ +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIEKGIKEITDAIKSEVQLLDIEPPELGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPGVNKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEDSDDTVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVVKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|309812195|ref|ZP_07705953.1| diaminopimelate decarboxylase [Dermacoccus sp. Ellin185] gi|308433882|gb|EFP57756.1| diaminopimelate decarboxylase [Dermacoccus sp. Ellin185] Length = 455 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 115/429 (26%), Positives = 178/429 (41%), Gaps = 23/429 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYALKA 61 +G + + L+++A TP Y + + AF G V YA KA Sbjct: 26 DGVVEIAGIGLDEIAERFGTPAYVIDEADVRSRARAYREAFARAFAAIGTQADVYYAGKA 85 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + V + + G LD+ S GEL A A VP E I G K + EID AL G+ Sbjct: 86 FLSSHVAQWVTEEGLRLDVCSGGELAIAKKAGVPGENIGMHGNNKGVAEIDDALAYGVGR 145 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V+S E+ + A AP+ RV + A+TH+ I+T ++ KFG Sbjct: 146 IVVDSFEEIDRVADAAARHHITAPVMIRVKLGVEAHTHEFIATAHEDQKFGFSAADGQIG 205 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIES---FHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 A A L ++ + H ES A +L+ Q + +G + +D+GG Sbjct: 206 DAVARVLARPELHLLGFHSHIGSQIFESAGFKEAATRLIALQLQVAKEHGVELPELDLGG 265 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVI 291 G GIAY P ++ A+ + + +EPGR +V G+ + +V Sbjct: 266 GFGIAYLPSDAPLDPAEMATQLAGIVREACQNADVPVPRVSIEPGRSIVGPGGVTLYRVG 325 Query: 292 SIKKSAD-----KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 ++K +T+V +D M+D RP LY A + N G +VG CE Sbjct: 326 TVKLVQASDDLVRTYVSVDGGMSDNARPALYQADYHAAL-ANRGGSDELTPTRVVGKHCE 384 Query: 347 TGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 +GD + + R GDL+ + TGAY + YN P I V ++ R Sbjct: 385 SGDVVVRDIDFPSDTRDGDLVVVAATGAYCRALASQYNHVPRPPVIAVADGDARVLLRRE 444 Query: 406 TFQELIELD 414 T +L+ L+ Sbjct: 445 TIDDLLALE 453 >gi|154249122|ref|YP_001409947.1| diaminopimelate decarboxylase [Fervidobacterium nodosum Rt17-B1] gi|154153058|gb|ABS60290.1| diaminopimelate decarboxylase [Fervidobacterium nodosum Rt17-B1] Length = 393 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 131/399 (32%), Positives = 196/399 (49%), Gaps = 23/399 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 +E +A TP Y YS I K T + F ++ +A KAN+N +I+ G G Sbjct: 11 IEAIAKTYGTPVYVYSREEILKRISTVKDVFSSVNLFPTFACKANNNPRIIEMFKDNGFG 70 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 DIVS GE A V ++IV++G GKT EI++ + + + + Sbjct: 71 ADIVSIGEYHACKLADVDDKKIVWNGNGKTRKEIEILSKK-----VGYVNIDSEEEYEIW 125 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + A RVNPD++A TH ISTG K+ KFGI + + ISG Sbjct: 126 SEIDSSAEFFLRVNPDVDAKTHPHISTGLKKSKFGI----QTDEIDRILSKKRLNISGFH 181 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +HIGSQI +E F +A + DL+++ + ++GGG GI Y Sbjct: 182 VHIGSQITDVEPFEEAISKVVDLSKKYGFSKI-----NIGGGWGIKYKDKELDILEYK-- 234 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + +ILE GR+++A G+LV KV +KK+ KTFV+LD MN MRP +Y Sbjct: 235 -ERIVPYLKDFKMVILELGRYMIAPAGLLVLKVEYVKKTRHKTFVVLDGGMNVLMRPAMY 293 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 +AYHE+N + + + D+VGP+CE+GD IA R + +P+ G + + GAYG Sbjct: 294 NAYHEVNVLDPESSE--KYIIDVVGPLCESGDIIAFERNLEIPKVGSYVIVRDVGAYGYS 351 Query: 378 QSGTYNSRLLIPEIMV--NGSQ--FHIIRPRMTFQELIE 412 S YNS E++V + F +IR R +E+ + Sbjct: 352 MSNNYNSMPRPAEVIVYEENGKYDFRLIRRREEIEEMFK 390 >gi|148910718|gb|ABR18426.1| unknown [Picea sitchensis] Length = 488 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 136/417 (32%), Positives = 223/417 (53%), Gaps = 15/417 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQT----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 K +G ++ E V L+ + T PFY YS I +NY + NA G+D+++ YA+K Sbjct: 73 KNRDGFMYCEGVRLQNVID---TMERRPFYLYSKPQITRNYEAYENALKGLDSIIGYAVK 129 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN+N +++ L LGSG +VS ELR AL A R +F+G GK +D++ LA G Sbjct: 130 ANNNLKILEHLRSLGSGAVLVSGNELRLALNAGFDPSRCIFNGNGKLLDDLVLAANEG-V 188 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 N++SE +L+ + + A KK + R+NPD++ H ++TG K KFGI ++ Sbjct: 189 LVNIDSEFDLENIVEAAKIAKKKVQVLLRINPDVDPEVHPYVATGNKNSKFGIRNEKLQW 248 Query: 181 LYAYASTLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 P + G H+GS I ++ F A L+ Q+R+ G I+++++GGG Sbjct: 249 FLDTVKAHPNELNLVGAHCHLGSTITKVNIFKDAAVLMIQYIDQIRAQGFEIKYLNIGGG 308 Query: 240 LGI-AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 LGI +H P+ D + + + + +I+EPGR LVA+ G+LV++V+ +K + + Sbjct: 309 LGIDYHHKGEVLPTPMDLINSVRKLVISGNLTLIVEPGRSLVANSGVLVSRVVGVKTNGN 368 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K F+++D +M + +RP+LY AY I I PA D+VGP+CE+ DF+ +R++ Sbjct: 369 KNFIVMDGSMAELIRPSLYGAYQHIELISPPAPKAKIQTFDVVGPVCESADFLGKDRELP 428 Query: 359 LPR--PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 P G + + GAY + TYN R+ E + + IR T ++ + Sbjct: 429 TPAMWAG--MVVHDAGAYCMSMASTYNLRMRPAEYWIQDDGSVKKIRHAETIEDHLR 483 >gi|315023548|gb|EFT36552.1| diaminopimelate decarboxylase [Riemerella anatipestifer RA-YM] Length = 400 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 127/410 (30%), Positives = 195/410 (47%), Gaps = 19/410 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 N +L +A TP Y Y +I++ Y +++F T YA KA +N ++K + Sbjct: 1 MITNQNLLSVAEEFGTPVYVYDAESIKQQYEKLTSSFSE-KTRFFYAAKALTNINILKYV 59 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 LG+ LD VS E++ L A +RI+F+ I E++ A++ G++ + Sbjct: 60 EKLGASLDCVSINEVKLGLKAGFSKDRILFTPNSVDISEVEEAVELGVHINIDN----IS 115 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 L Q G PI RVNP I A + KISTG + KFGI IHQ+ + A T Sbjct: 116 ILEQFGTKFGGSYPIFVRVNPHIFAGGNYKISTGHIDSKFGISIHQMRHIERVAKTTGL- 174 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + G+ MH GS+I + F + +++ +L + N+++ID+G G I Y Sbjct: 175 NVEGLHMHTGSEIKDPDVFLQGLEIMF----ELAEHFPNLKYIDMGSGFKIPYQEGDMET 230 Query: 252 SSSDYASLIHQYFGNLQC------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + + ++ EPG+FLV G + K IK++ FV ++ Sbjct: 231 DVKSLGKKVEKALAKFNEEQGKELQLWFEPGKFLVGKSGHFLVKSNVIKQTTATVFVGVN 290 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 N +RP YD+YH+I + NP G +VG ICET D A +RKI R GD+ Sbjct: 291 SGFNHLIRPMFYDSYHKIENLSNPNG--PERIYTVVGNICET-DTFAWDRKINEVREGDV 347 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 L GAYG S +NSRL E++ + H+IR R F++L+ Sbjct: 348 LVFRNAGAYGFEMSSNFNSRLKPAEVLWLDGKAHLIRKRDEFEDLLRNQI 397 >gi|292655256|ref|YP_003535153.1| diaminopimelate decarboxylase [Haloferax volcanii DS2] gi|291370043|gb|ADE02270.1| diaminopimelate decarboxylase [Haloferax volcanii DS2] Length = 415 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 115/398 (28%), Positives = 184/398 (46%), Gaps = 9/398 (2%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA +P Y + +N L AF V YA+KA++ +AV++T+ G Sbjct: 19 LLSLAGEFGSPLYVTDLRRVRENCLRLREAFPE--AHVSYAVKAHAGRAVLETVREAGVD 76 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 + S GE+ RAL A P ER+ ++ V ++D + + R Sbjct: 77 AECASAGEVERALDAGFPGERVRYTAVNPPDADLDHVVSRWESNPEMTVTVGAADTIDRL 136 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G + R NP + A H+K++TG KFGIPI ++ L A + V Sbjct: 137 RERGFDGRLCLRANPGVGAGHHEKVTTGGHA-KFGIPIDRVPDLAADVRE----EFDLVG 191 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +H + A + L L ++ +DVGGG G+ Y D P + A Sbjct: 192 VHAHAGSGISGDDLSAHRELVRRMGDLAREVGGLEFVDVGGGFGVPYREDEPPLDLAAVA 251 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + G + ++ +EPGR++VAD G+L+++V ++K+ + T V +D M +RP +Y Sbjct: 252 DATREALGEVDAQLAVEPGRYVVADAGVLLSRVNTVKEVPETTVVGIDAGMTTLLRPAMY 311 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 DAYH I+ + D + + GP+CET D A R + P GD L + GAYG Sbjct: 312 DAYHAISNLSR--PDADPVSTIVAGPVCETSDVFADGRDLPDPERGDCLALGNAGAYGYE 369 Query: 378 QSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + TYNSR PE++++ + R R T ++ L+ Sbjct: 370 MASTYNSRPRPPEVVLDADGPRLARRRETLHDVTALER 407 >gi|225428408|ref|XP_002283712.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] Length = 485 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 129/410 (31%), Positives = 218/410 (53%), Gaps = 5/410 (1%) Query: 7 FEGSLHAENVSLEKLAHVV-QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 +G L+ E + ++ + V + PFY YS I +N+ + A +G+ +++ YA+KAN+N Sbjct: 72 EDGFLYCEGLRVQDVMDQVEKRPFYLYSKPQITRNFEAYKEALEGLRSIIGYAIKANNNL 131 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ L LG G +VS ELR AL A R +F+G GK ++++ LA Q G++ Sbjct: 132 KILEHLRELGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDS 191 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 ++ ++ GKK + R+NPD++ H ++TG K KFGI ++ Sbjct: 192 EFDLDNIISAARIA-GKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAV 250 Query: 186 STLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-A 243 P K+ G H+GS I +++ F A L+ + ++R+ G I ++++GGGLGI Sbjct: 251 KAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDY 310 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 YH+ P+ D + + + +I+EPGR L+A+ LV +V +K + K FV+ Sbjct: 311 YHAGAVLPTPRDLIDTVRELVLSRDLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFVV 370 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D +M + +RP+LYDAY I + P D D+VGP+CE+ DF+ +R++ P G Sbjct: 371 IDGSMAELIRPSLYDAYQHIELVSPPPSDAQISTFDVVGPVCESADFLGKDRELPTPPRG 430 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 L + GAY + TYN ++ PE V + IR TF++ + Sbjct: 431 AGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDDGSMSKIRHGETFEDHVR 480 >gi|313206511|ref|YP_004045688.1| diaminopimelate decarboxylase [Riemerella anatipestifer DSM 15868] gi|312445827|gb|ADQ82182.1| diaminopimelate decarboxylase [Riemerella anatipestifer DSM 15868] gi|325336041|gb|ADZ12315.1| Diaminopimelate decarboxylase [Riemerella anatipestifer RA-GD] Length = 400 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 127/410 (30%), Positives = 194/410 (47%), Gaps = 19/410 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 N +L +A TP Y Y +I++ Y +++F T YA KA +N ++K + Sbjct: 1 MITNQNLLSVAEEFGTPVYVYDAESIKQQYEKLTSSFSE-KTRFFYAAKALTNINILKYV 59 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 LG+ LD VS E++ L A +RI+F+ I E++ A++ G++ + Sbjct: 60 EKLGASLDCVSINEVKLGLKAGFSKDRILFTPNSVDISEVEEAVELGVHINIDN----IS 115 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 L Q G PI RVNP I A + KISTG + KFGI IHQ+ + A T Sbjct: 116 ILEQFGTKFGGSYPIFVRVNPHIFAGGNYKISTGHIDSKFGISIHQMRHIERVAKTTGL- 174 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + G+ MH GS+I + F + +++ +L + N+++ID+G G I Y Sbjct: 175 NVEGLHMHTGSEIKDPDVFLQGLEIMF----ELAEHFPNLKYIDMGSGFKIPYQEGDMET 230 Query: 252 SSSDYASLIHQYFGNLQC------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + + ++ EPG+FLV G + K IK++ FV ++ Sbjct: 231 DVKSLGKKVEKALAKFNEEQGKELQLWFEPGKFLVGKSGHFLVKSNVIKQTTATVFVGVN 290 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 N +RP YD+YH+I + NP G +VG ICET D A +RKI R GD+ Sbjct: 291 SGFNHLIRPMFYDSYHKIENLSNPNG--PERIYTVVGNICET-DTFAWDRKINEVREGDI 347 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 L GAYG S +NSRL E+ + H+IR R F++L+ Sbjct: 348 LVFRNAGAYGFEMSSNFNSRLKPAEVFWLDGKAHLIRKRDEFEDLLRNQI 397 >gi|119715978|ref|YP_922943.1| diaminopimelate decarboxylase [Nocardioides sp. JS614] gi|119536639|gb|ABL81256.1| diaminopimelate decarboxylase [Nocardioides sp. JS614] Length = 466 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 119/423 (28%), Positives = 180/423 (42%), Gaps = 18/423 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G LH +S+ + V TP Y + V YA KA V Sbjct: 42 DGVLHVGGLSVPDVVANVNTPAYVLDEADFR--MRARAFRDAFAAYDVFYAGKAFLCTTV 99 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LD+ S GEL AL A RI + G KT+ E+ AL +G+ V+S Sbjct: 100 ARWVQEEGLCLDVCSNGELTVALRAGFDPARIGYHGNNKTVTELRRALAAGVGRIIVDSF 159 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHSLYAYA 185 EL L G A + RV + A+TH+ I+T ++ KFG I A Sbjct: 160 DELARLEMITADSGLPARVMIRVTAGVEAHTHEYIATAHEDQKFGFSITSGDAFEAARRA 219 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGIAY 244 PG+ + G+ HIGSQI F A + + L ++ G + +D+GGG GIAY Sbjct: 220 EAAPGIDLLGLHSHIGSQIFDSSGFEVAARRVLALQARISQELGVTLPEMDLGGGFGIAY 279 Query: 245 H-------SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 P+ + + G + ++ +EPGR +V V V ++K Sbjct: 280 TTQDDPAEPAQLAPAMTKIVEHECRALGIPEPRLSIEPGRAIVGPAMCTVYTVGTVKPVQ 339 Query: 298 -----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 +T+V +D M+D +R LYDA + P+ + A +VG CE GD + Sbjct: 340 LDGGAVRTYVSVDGGMSDNIRTALYDADYSCTLASRPSTIGGSVLARVVGKHCEAGDIVV 399 Query: 353 LNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + RPGDL+ + TGAY + YN L P + V ++ R T +L+ Sbjct: 400 KDEFLPADVRPGDLVAVPGTGAYCRSMASNYNHALRPPVVAVRDGVARVVVRRETEDDLL 459 Query: 412 ELD 414 D Sbjct: 460 ATD 462 >gi|172063790|ref|YP_001811441.1| diaminopimelate decarboxylase [Burkholderia ambifaria MC40-6] gi|171996307|gb|ACB67225.1| diaminopimelate decarboxylase [Burkholderia ambifaria MC40-6] Length = 417 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 125/424 (29%), Positives = 182/424 (42%), Gaps = 40/424 (9%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I FD ++ YA KANSN ++K + Sbjct: 8 LATLAQQYGTPLWVYDADVIRDRIAQLRQ-FD----VIRYAQKANSNLHILKLMRDERVC 62 Query: 78 LDIVSEGELRRALAAPV---------PAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 +D VS GE+ R+LAA E +VF+ + L+ G+ + Sbjct: 63 VDAVSLGEIERSLAAGFSPAGGPASGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDM 122 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 R + RVNP K +TG + K GI I + Sbjct: 123 -----LARVGEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQY 177 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 K+ G+ MHIGS + + ++ + + S GH+I+ I GGGL I Y Sbjct: 178 GL-KLVGIHMHIGSGV----DYGHLSQVCDAMVDLVTSLGHDIEAISAGGGLSIPYRDGE 232 Query: 249 RPPSSSDYASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 Y S +I +EPGRFLVA+ G LVT+V ++ FV Sbjct: 233 PRVDVGHYFSQWDAARKRIERHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNHRPKHDFV 292 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNP---AGDRLHIHADIVGPICETGDFIALN----- 354 ++D ND MRP++Y +YH ++ R + I GP+CE+GD + Sbjct: 293 LIDAGFNDLMRPSMYGSYHAVSVHAPDGALPAGRPLVDIAIAGPLCESGDVFTQDAGGVV 352 Query: 355 --RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 RK+A P+ GDLL++ GAYGA S YNSR L PE++V+ +IR R T EL+ Sbjct: 353 THRKLAQPQIGDLLFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 412 Query: 413 LDSI 416 L++ Sbjct: 413 LETF 416 >gi|224824693|ref|ZP_03697800.1| diaminopimelate decarboxylase [Lutiella nitroferrum 2002] gi|224603186|gb|EEG09362.1| diaminopimelate decarboxylase [Lutiella nitroferrum 2002] Length = 413 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 110/429 (25%), Positives = 183/429 (42%), Gaps = 32/429 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 L L +A TP + Y I + AFD ++ +A KA S Sbjct: 1 MTIRNPEL------LNAVARQYGTPVWLYDAAVIRERVAQLR-AFD----VIRFAQKACS 49 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N +++ + G +D VS GE+ RALAA SG+ T D +D A + + Sbjct: 50 NIHILRLMREQGVVVDAVSLGEIERALAAGFSGRGDEPSGIVLTADLLDQATLARVVEEQ 109 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 + + + ++ + + R+NP K +TG + K GI Q+ Sbjct: 110 IPVNAGSIDMLRQLGTASPGHRVWLRINPGFGHGHSNKTNTGGENSKHGIWHEQLPDALQ 169 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + + + I + ++ + + + GH+++ I GGGL I Sbjct: 170 VIR-----EHGLTLVGLHMHIGSGVDYGHLQQVCGAMVELVAGMGHDLEAISAGGGLSIP 224 Query: 244 YHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSA 297 Y ++ Y L ++ +EPGRFLVA+ G L+ +V ++K Sbjct: 225 YRDGEARIDTAHYFGLWDAARKEIEARLGHPVRLEIEPGRFLVAESGTLLAEVRAVKDMG 284 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL---HIHADIVGPICETGDFIALN 354 + FV++D ND MRP++Y +YH I+ + + + GP+CE+GD Sbjct: 285 SRHFVLVDAGFNDLMRPSMYGSYHGISLVAQGRPQPAGDALLPTVVAGPLCESGDVFTQE 344 Query: 355 -------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L TGAYGA S YNSR L+PE++++G +IR R T Sbjct: 345 DGGVVVTRDLPPCQVGDYLLFHDTGAYGASMSSNYNSRPLLPEVLIDGDAVRLIRRRQTM 404 Query: 408 QELIELDSI 416 EL+ L+++ Sbjct: 405 AELLALEAV 413 >gi|253990743|ref|YP_003042099.1| diaminopimelate decarboxylase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782193|emb|CAQ85357.1| Diaminopimelate decarboxylase [Photorhabdus asymbiotica] Length = 445 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 115/416 (27%), Positives = 185/416 (44%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L +L TP + Y + I + FD +V +A KA SN +++ + G Sbjct: 16 NLSRLPEAYGTPLWVYDSETIIQKIKLLCQ-FD----VVRFAQKACSNTHILRLMREYGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A S + T D ID + + + + + Sbjct: 71 KVDAVSLGEIERALRAGFCP-GQAESDIVFTADLIDGPTLQQVTKLGIPVNAGSIDMLEH 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 K P+ R+NP +K +TG + K GI + K+ G+ Sbjct: 130 IGRYRKGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYQDLPLAIEKIRHYEL-KLLGL 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + + + +Q+ G +IQ I GGGL Y + + Y Sbjct: 189 HMHIGSGV----DYQHLASVCDAMVEQVILCGEDIQAISAGGGLSTPYQQGDERINIAHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + ++ +EPGRFLVA+ G+L+++V ++K+ + +V++D ND Sbjct: 245 FGLWDDARKRIEQHLGHKVELEIEPGRFLVAESGVLMSEVRAVKQMGSRNYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIH---ADIVGPICETGDFIAL-------NRKIALP 360 MRP +Y +YH I+ + + + GP+CE+GD R + Sbjct: 305 LMRPVMYGSYHHISVLPADGRKIEQLPLQETLVAGPLCESGDVFTQVEGGGVAPRMLPPV 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L TGAYGA S YNSR LIPE++ +F +IR R T +EL+ L+ + Sbjct: 365 QVGDYLVFHDTGAYGASMSSNYNSRPLIPEVLFINGKFRLIRRRQTIEELLALEEV 420 >gi|314936454|ref|ZP_07843801.1| diaminopimelate decarboxylase [Staphylococcus hominis subsp. hominis C80] gi|313655073|gb|EFS18818.1| diaminopimelate decarboxylase [Staphylococcus hominis subsp. hominis C80] Length = 421 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 121/425 (28%), Positives = 195/425 (45%), Gaps = 22/425 (5%) Query: 5 KYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKA 61 KY + G L SL+ LA TP Y+ I F NAF G+ + YA KA Sbjct: 4 KYNDYGELTMAGTSLKTLAQSFGTPTIVYNEDEIRNQMRRFHNAFQKSGLKYNISYASKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + ++K + LD+VSEGEL AL A RI F G KT EI AL+SG+ Sbjct: 64 FTCIQMVKLVQEENLQLDVVSEGELYTALEAKFDPSRIHFHGNNKTKREIQYALESGVGY 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F ++S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I ++ Sbjct: 124 FVIDSLEEIELIDRYA---SDTVNVVIRVNPGVEAHTHEFIQTGQEDSKFGLSIRHGLAI 180 Query: 182 YA--YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A + + G+ H+GSQI+ E+ + K++ + + ++ +++GGG Sbjct: 181 QAVEKVKASKHLHLKGIHFHVGSQIEGTEAMIETAKIVLNWLNEH---HIQVELLNLGGG 237 Query: 240 LGIAY-HSDHRPPSSSDYASLIHQYF------GNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y D P A + +I +EPGR +V + GI + +V + Sbjct: 238 FGIKYVEGDVSFPIEEGIAEITDAIKSESEKLNYDVPEIGIEPGRSIVGEAGITLYEVGT 297 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK + +D M+D +R LY A ++ + + I G +CE+GD I Sbjct: 298 IKDIPEVNKYVSIDGGMSDHIRTALYGAKYQALLVNRH--EEADETVTIAGKLCESGDII 355 Query: 352 ALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + + + GD L I TGAY + YN P + + + R + ++L Sbjct: 356 IRDAMLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPPVFFLKDGKAREVIKRQSLRQL 415 Query: 411 IELDS 415 I D+ Sbjct: 416 IINDT 420 >gi|297829990|ref|XP_002882877.1| hypothetical protein ARALYDRAFT_478856 [Arabidopsis lyrata subsp. lyrata] gi|297328717|gb|EFH59136.1| hypothetical protein ARALYDRAFT_478856 [Arabidopsis lyrata subsp. lyrata] Length = 485 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 128/410 (31%), Positives = 217/410 (52%), Gaps = 5/410 (1%) Query: 8 EGSLHAENVSLEKLAHVVQT-PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L+ E +E + V+ PFY YS I +N + A +G+ +++ YA+KAN+N Sbjct: 73 DGFLYCEGTKVEDIMESVERRPFYLYSKPQITRNLEAYKEALEGVTSVIGYAIKANNNLK 132 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ L L G +VS ELR AL A + +F+G GK ++++ LA Q G++ NV+S Sbjct: 133 ILEHLRSLSCGAVLVSGNELRLALLAGFDPTKCIFNGNGKLLEDLVLAAQEGVF-VNVDS 191 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E +L + + + GK+ + R+NPD++ H ++TG K KFGI ++ Sbjct: 192 EFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVK 251 Query: 187 TLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-AY 244 P K+ G H+GS I +++ F A L+ + ++R G + ++++GGGLGI Y Sbjct: 252 AHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYY 311 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 H+ P+ D + + + + +I+EPGR L+A+ V V +K + K F+++ Sbjct: 312 HAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVI 371 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D +M + +RP+LYDAY I + P + D+VGP+CE+ DF+ +R++ P G Sbjct: 372 DGSMAELIRPSLYDAYQHIELVSPPPPEAEVTKFDVVGPVCESADFLGKDRELPTPPQGA 431 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 L + GAY + TYN ++ PE V IR TF + + Sbjct: 432 GLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSISKIRHAETFDDHLRF 481 >gi|300781428|ref|ZP_07091282.1| diaminopimelate decarboxylase [Corynebacterium genitalium ATCC 33030] gi|300533135|gb|EFK54196.1| diaminopimelate decarboxylase [Corynebacterium genitalium ATCC 33030] Length = 466 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 102/425 (24%), Positives = 174/425 (40%), Gaps = 18/425 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G++ V L +A TP A+ + V YA KA + Sbjct: 44 DGTVTIAGVPLPDIAAEYGTPVMVVDEDDFRSRCRDMVRAYGKPE-NVHYASKAFLTTHI 102 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LD+ SE EL AL A PAERI G K + ++ G+ ++S Sbjct: 103 ARWVNEEGLSLDVASENELLIALHAGFPAERITVHGNNKPDSFLRRCVREGVGEVVIDSH 162 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY--A 185 EL+ L + A G + RV P + A+TH+ I+T ++ KFG+ + + A A Sbjct: 163 QELEELERIAGEEGTVQEVFIRVKPGVEAHTHEFIATSHEDQKFGLSLVSGSAYRAAVAA 222 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 S ++++G+ H+GSQ+ E F A + L Q+ GG + Sbjct: 223 SEADNIQLTGLHCHVGSQVFDAEGFKLAAARVLGLYAQIYRELGLELGYLDLGGGYGIAY 282 Query: 246 SDHRPPSSSD--------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-----IS 292 ++ P + D + G ++I+EPGR + + V V + Sbjct: 283 TNEEQPLAVDDVAKDLLKAVAEKADELGITPPEVIVEPGRAIAGPAAVTVYSVGTVKDVH 342 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + A + ++ +D M+D +R LY A ++ +VN D +VG CE+GD + Sbjct: 343 VTDEATRRYIAVDGGMSDNIRTALYGADYD-ARVVNRLTDGTPQATRMVGAHCESGDILI 401 Query: 353 LNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 N GDL+ + TGAY + YN + V + R T ++++ Sbjct: 402 NNALWPDDIASGDLIALAATGAYCYSMASNYNCFGRPAVVSVKDGVVTPMVRRETVEDIL 461 Query: 412 ELDSI 416 + + Sbjct: 462 AREVL 466 >gi|328907552|gb|EGG27318.1| diaminopimelate decarboxylase [Propionibacterium sp. P08] Length = 478 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 117/432 (27%), Positives = 187/432 (43%), Gaps = 22/432 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G + V++ +L +P Y + + TF +AF G D V YA KA + + Sbjct: 45 NGIVDVAGVAVTELLRQYGSPLYVLDESDFRQRVRTFRDAFSGWD--VYYAGKAFLTRTI 102 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G LD + GEL AL + RI G K++DE+ LAL +G+ V+S Sbjct: 103 ASWIDQEGLCLDTCTGGELLTALQGGMDPARIGLHGNNKSVDELKLALSAGVGRIIVDSL 162 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ + Q G A + RV + A+TH+ I+T ++ KFG I ++ A Sbjct: 163 DEITRIEQLCRENGWHARVMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRC 222 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGIAY 244 + + G+ HIGSQI F A + L +Q R + +D+GGG GIAY Sbjct: 223 HTSNVIDLLGIHSHIGSQIFDTAGFEVAARRTMKLLEQFRQATGSALAELDLGGGFGIAY 282 Query: 245 HSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 S P ++ A + + G I LEPGR +V + + V ++K Sbjct: 283 TSQDSPATAESLAEALREIVAVEARGRGMEIPHISLEPGRAIVGPTTMALYTVGTVKPVD 342 Query: 298 DKT-----FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 T +V +D M+D +RP LY A + + N A + +VG CE GD + Sbjct: 343 LDTGAQRIYVSVDGGMSDNIRPALYAAEY-SAVVANRASKIAPVLCRVVGKHCEAGDILV 401 Query: 353 LNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV---NGSQFHIIRPRMTFQ 408 + + PGD++ + GAY + YN + V + ++ R + Sbjct: 402 RDVYLPGDVSPGDVIAVPGAGAYSRSMASNYNHVPRSAVVRVGTGDDPDVSVLLRRESID 461 Query: 409 ELIELDSIPAWL 420 +L+ LD P + Sbjct: 462 DLLALDPGPVRV 473 >gi|326791961|ref|YP_004309782.1| diaminopimelate decarboxylase [Clostridium lentocellum DSM 5427] gi|326542725|gb|ADZ84584.1| diaminopimelate decarboxylase [Clostridium lentocellum DSM 5427] Length = 417 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 93/423 (21%), Positives = 166/423 (39%), Gaps = 18/423 (4%) Query: 1 MSAFK--YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA 58 M + Y + + L +P Y Y+ + + + + Y+ Sbjct: 1 MHSLHGSYTTETNFYGGNDVFDLIEQYGSPLYIYNENILRTRCREMKHLVSYENFVPHYS 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN+N ++K + G D++S GE+ AL + E + F +++ A+ Sbjct: 61 IKANTNIHLLKIVHEEGLHADVMSPGEIYLALESGFSPEELFFIPNNVVAEDMLYAIDRN 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I + + L +A R NP + A H+K+ TG K+ KFG+ I Sbjct: 121 IMTSVDSLD-----QLELYGQLNPGGKVAIRFNPGVGAGHHEKVVTGGKKTKFGVNPEYI 175 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + T ++G++ HIGS + ++ + + +Q Sbjct: 176 PEVKRLLETYNLT-LAGINQHIGSLFMDGAPYIESLGSILSIAKQFDDLEFIDLGGGF-- 232 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVIS 292 G+ + + + +EPGR++ + LV V + Sbjct: 233 GIPYHKQDGEARLNIKALGEALDPVLSSFAKEYGKNVQFQIEPGRYIPCESCALVGTVTA 292 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K +AD +V D+ N RP +YD++H+I + +VG ICE+GD +A Sbjct: 293 TKTNADHDYVGCDIGFNVLQRPIMYDSHHDIEIYSRELKEAPLGPLTVVGNICESGDILA 352 Query: 353 LNRKIALPRP-GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 +R + L GDL+ + GAYG + YN R EI++ + IR R T ++L Sbjct: 353 KDRMLPLTTVRGDLIALMDAGAYGYSMASCYNQRFRPAEILIGLDGKVRQIRKRDTLEDL 412 Query: 411 IEL 413 I Sbjct: 413 IRN 415 >gi|256395876|ref|YP_003117440.1| diaminopimelate decarboxylase [Catenulispora acidiphila DSM 44928] gi|256362102|gb|ACU75599.1| diaminopimelate decarboxylase [Catenulispora acidiphila DSM 44928] Length = 423 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 121/428 (28%), Positives = 192/428 (44%), Gaps = 22/428 (5%) Query: 1 MSAFKYFE-----------GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD 49 M++ + G L + LA TP Y + +AF Sbjct: 1 MNSISVRDQIWPAHAAWADGELTVAGHGVRALAAEFGTPLYVLDAADFRARCSAWLDAFP 60 Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 + V Y KA AV+ LA LG LD+ S GEL A +P ER+VF G K++ Sbjct: 61 --NGDVHYGGKAFLAPAVVGWLAELGLCLDVCSGGELAVARVGGMPPERVVFHGNNKSVA 118 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 EI A+ G+ C ++S E++ + + A G + P+ RV P I+A TH ++TG + Sbjct: 119 EIRQAVAWGVGCIVLDSLHEVERVARAAAEAGTRQPVMVRVKPGIDAATHASLATGGERT 178 Query: 170 KFGIPIHQIHSLYAYASTLPGV--KISGVDMHIGSQIDQIESFHKAFKLLR-DLTQQLRS 226 KFG+ + ++ A L + G+ HIGSQI ++SF +A + + L R Sbjct: 179 KFGMSMASGEAMEAVRRVLGESALEFIGLHSHIGSQIFDLDSFAEAARRMVGFLRDVERR 238 Query: 227 NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 G + +D+GGGLGI Y +P S+ + + ++ +EPGR + + Sbjct: 239 QGIVVGRLDLGGGLGIPYLPGEKPASTPADLADVLHAVVPAGIRLAVEPGRAIAGPSTVA 298 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 V +V ++K FV +D M+D RP Y A + + +VG CE Sbjct: 299 VYEVGTVKGG----FVAVDGGMSDNPRPATYGAVYTAVLASRHSA-APVEPVTVVGKHCE 353 Query: 347 TGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 +GD + + + PGDL+ I +GAY + YN P + V+ + H I R Sbjct: 354 SGDVLIEDIALPADLAPGDLIAIPCSGAYQRSTASNYNLVTRPPVVAVHENAAHAIVRRE 413 Query: 406 TFQELIEL 413 T ++L+ L Sbjct: 414 TEEDLLRL 421 >gi|73662659|ref|YP_301440.1| diaminopimelate decarboxylase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495174|dbj|BAE18495.1| diaminopimelate decarboxylase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 421 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 109/419 (26%), Positives = 178/419 (42%), Gaps = 17/419 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 G L SL+ +A TP + Y I + AF + YA KA + Sbjct: 8 NGELTMGGTSLKTIAQSFGTPTFVYDEVQIRNQMRRYHEAFKQSGLAYNISYASKAFTCL 67 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 ++K + G LD+VSEGEL AL A + I F G KT EI AL+S + ++ Sbjct: 68 QMVKLVQEEGLELDVVSEGELYTALEAGFDPKHIHFHGNNKTKHEIQYALESKVGYIVID 127 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 S E+ + + A ++ + R+NP + A+TH+ I TG+++ KFG+ I ++ Sbjct: 128 SLEEIVLIERYA---SEEIDVVLRLNPGVEAHTHEFIQTGQEDSKFGLSIKHGLAIQGIE 184 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY- 244 K++ +H IE + + L++N + I++GGG I Y Sbjct: 185 KVRDTQKLNLKGVHFHVGSQ-IEGTEAMIETANIVINWLKANDIKVDLINLGGGFSIKYV 243 Query: 245 -----HSDHRPPSSSDYASLIHQYFGNLQCKII-LEPGRFLVADVGILVTKVISIKKSAD 298 + A + I +EPGR +V + GI + +V +IK+ Sbjct: 244 EGDVSFPIEEGIAEITAAIKSIAEDADYPVPEIGIEPGRSIVGEAGITLYEVGTIKEIPQ 303 Query: 299 KTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 +D M+D +R LYDA +E + D I G +CE+GD I + ++ Sbjct: 304 VNKYVSIDGGMSDHIRTALYDAKYEALLVNR--NDPKDETVTIAGKLCESGDIIIKDAQL 361 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GD L I TGAY + YN + + + R + ++LI D+ Sbjct: 362 PSTVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIINDT 420 >gi|88855309|ref|ZP_01129973.1| diaminopimelate decarboxylase [marine actinobacterium PHSC20C1] gi|88815216|gb|EAR25074.1| diaminopimelate decarboxylase [marine actinobacterium PHSC20C1] Length = 467 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 121/425 (28%), Positives = 187/425 (44%), Gaps = 21/425 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYALKAN 62 G L VS +L TP Y +AFD G V YA KA Sbjct: 35 GELSIAGVSTTELVRQFGTPVYVIDEADAIARATEIKSAFDSEFARIGSSVKVYYAGKAF 94 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 V + + G +D+ S GE+ ALAA V A R+ F G K++ EID A+++GI Sbjct: 95 LCTEVARWMTAAGLNIDVASAGEMAVALAAGVDASRLGFHGNNKSLSEIDRAVRAGIGPI 154 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ++S E+ + A G+ + R+N ++A+TH+ ++T +++ KFGIP+ + S+ Sbjct: 155 VIDSVVEIGRVADAATRHGRTQRVRLRINSGVHASTHEYLATAREDQKFGIPLAEAESVV 214 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A + + G+ HIGSQI F +A + L +L +L + G + +++GGG GI Sbjct: 215 AQIRSHGSLDFVGIHSHIGSQIFDTAGFAEAAQRLLELHARLAALGPVPE-LNLGGGFGI 273 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKK 295 AY S ++ A+ + I +EPGR ++ + +IK Sbjct: 274 AYTSADEALPVAELAASLASIVQAECARLEIDVPLIAIEPGRSIIGPSTTTLYTAGTIKD 333 Query: 296 -----SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 A + +V +D M+D +R LY A + I N I G CE GD Sbjct: 334 VLVDGEAVRKYVSVDGGMSDNLRTALYGADY-SARIANRDSQADPALVRIAGKHCEAGDI 392 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 I + PGD++ + TGAYG S YN P + V II T + Sbjct: 393 IVRAEYLPGDIEPGDIIAVPATGAYGWAMSNNYNYLARPPVVAVRDGHARIIVRGETEDD 452 Query: 410 LIELD 414 L+ D Sbjct: 453 LLSRD 457 >gi|116491950|ref|YP_803685.1| diaminopimelate decarboxylase [Pediococcus pentosaceus ATCC 25745] gi|116102100|gb|ABJ67243.1| diaminopimelate decarboxylase [Pediococcus pentosaceus ATCC 25745] Length = 430 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 111/428 (25%), Positives = 181/428 (42%), Gaps = 15/428 (3%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCY 57 MS + + +S +LA TP + T I F F+ V Y Sbjct: 1 MSLYTVNNVNQVTIGGLSATQLARQYGTPLQVFDVTMIRNQIQAFQKEFEDRGIRGIVSY 60 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A KA S +A+ + + + D+VS GE+ ALAA P+ + F G K++ E++ A+Q Sbjct: 61 ASKAFSCKAIYQVVKQEHAHSDVVSGGEIATALAAGFPSTSLSFHGNNKSLAELNFAVQK 120 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH- 176 G+ +++ EL+ L+Q + + RV P ++A+TH I TG+ + KFG I Sbjct: 121 GVGTIILDNFHELELLDQVLNENNTQIDVLLRVTPGVSAHTHSYIQTGQTDSKFGFDIDS 180 Query: 177 -QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q + P + + G+ HIGSQI ++ F K L +L I Sbjct: 181 GQALKAMRLSQNNPRIHLRGIHAHIGSQIFEVTGFKLEVKKLVNLLTNWSQKYQFTADIL 240 Query: 236 VGGGLGIAYHSDHRPPSSSDYA--------SLIHQYFGNLQCKIILEPGRFLVADVGILV 287 GG ++ P + + + + G I +EPGR +V G + Sbjct: 241 NIGGGFGIKYTHADDPLAPELLLGEILDELQVQYSKLGQPIPTIWIEPGRSIVGPAGFSL 300 Query: 288 TKVISIKKSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + S K +V +D M D +RP LY A +E N + G CE Sbjct: 301 YTIGSRKDVPGLSPYVAVDGGMGDNIRPALYQADYEAVLAEN-PNQPPIETVRLAGKFCE 359 Query: 347 TGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 +GD + + + + GD+L + TGAYG + YN + SQ ++ R T Sbjct: 360 SGDILINHLPLPTTKTGDVLVMLATGAYGYSMASNYNRNPRPAVVFAENSQAQLVIQRET 419 Query: 407 FQELIELD 414 + ++I+ D Sbjct: 420 YADMIQND 427 >gi|314927466|gb|EFS91297.1| diaminopimelate decarboxylase [Propionibacterium acnes HL044PA1] Length = 478 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 117/431 (27%), Positives = 186/431 (43%), Gaps = 22/431 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G + V++ +L +P Y + + TF +AF G D V YA KA + + Sbjct: 45 NGIVDVAGVAVTELLRQYGSPLYVLDESDFRQRVRTFRDAFSGWD--VYYAGKAFLTRTI 102 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G LD + GEL AL + RI G K++DE+ LAL +G+ V+S Sbjct: 103 ASWIDQEGLCLDTCTGGELLTALQGGMDPARIGLHGNNKSVDELKLALSAGVGRIIVDSL 162 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ + Q G A + RV + A+TH+ I+T ++ KFG I ++ A Sbjct: 163 DEITRIEQLCRENGWHARVMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRC 222 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGIAY 244 + + G+ HIGSQI F A + L +Q R + +D+GGG GIAY Sbjct: 223 HTSNVIDLLGIHSHIGSQIFDTAGFEVAARRTMKLLEQFRQATGSALAELDLGGGFGIAY 282 Query: 245 HSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 S P ++ A + + G I LEPGR +V + + V ++K Sbjct: 283 TSQDSPATAESLAEALREIVAVEARGRGMEIPHISLEPGRAIVGPTTMALYTVGTVKPVD 342 Query: 298 DKT-----FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 T +V +D M+D +RP LY A + + N A + +VG CE GD + Sbjct: 343 LDTGAQRIYVSVDGGMSDNIRPALYAAEY-SAVVANRASKIAPVLCRVVGKHCEAGDILV 401 Query: 353 LNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV---NGSQFHIIRPRMTFQ 408 + + PGD++ + GAY + YN + V + ++ R + Sbjct: 402 RDVYLPGDVSPGDVIAVPGAGAYSRSMASNYNHVPRSAVVRVGTGDDPDVSVLLRRESID 461 Query: 409 ELIELDSIPAW 419 +L+ LD P Sbjct: 462 DLLALDPGPVR 472 >gi|313837653|gb|EFS75367.1| diaminopimelate decarboxylase [Propionibacterium acnes HL037PA2] gi|314972593|gb|EFT16690.1| diaminopimelate decarboxylase [Propionibacterium acnes HL037PA3] Length = 478 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 117/431 (27%), Positives = 186/431 (43%), Gaps = 22/431 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G + V++ +L +P Y + + TF +AF G D V YA KA + + Sbjct: 45 NGIVDVAGVAVTELLRQYGSPLYVLDESDFRQRVRTFRDAFSGWD--VYYAGKAFLTRTI 102 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G LD + GEL AL + RI G K++DE+ LAL +G+ V+S Sbjct: 103 ASWIDQEGLCLDTCTGGELLTALQGGMDPARIGLHGNNKSVDELKLALSAGVGRIIVDSL 162 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ + Q G A + RV + A+TH+ I+T ++ KFG I ++ A Sbjct: 163 DEITRIEQLCRENGWHARVMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRC 222 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGIAY 244 + + G+ HIGSQI F A + L +Q R + +D+GGG GIAY Sbjct: 223 HTSNVIDLLGIHSHIGSQIFDTAGFEVAARRTMKLLEQFRQATGSALAELDLGGGFGIAY 282 Query: 245 HSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 S P ++ A + + G I LEPGR +V + + V ++K Sbjct: 283 TSQDSPATAESLAEALREIVAVEARGRGMEIPHISLEPGRAIVGPTTMALYTVGTVKPVD 342 Query: 298 DKT-----FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 T +V +D M+D +RP LY A + + N A + +VG CE GD + Sbjct: 343 LDTGAQRIYVSVDGGMSDNIRPALYAAEY-SAVVANRASKIAPVLCRVVGKHCEAGDILV 401 Query: 353 LNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV---NGSQFHIIRPRMTFQ 408 + + PGD++ + GAY + YN + V + ++ R + Sbjct: 402 RDVYLPGDVSPGDVIAVPGAGAYSRSMASNYNHVPRSAVVRVGTGDDPDVSVLLRRESID 461 Query: 409 ELIELDSIPAW 419 +L+ LD P Sbjct: 462 DLLALDPGPVR 472 >gi|212696490|ref|ZP_03304618.1| hypothetical protein ANHYDRO_01028 [Anaerococcus hydrogenalis DSM 7454] gi|212676510|gb|EEB36117.1| hypothetical protein ANHYDRO_01028 [Anaerococcus hydrogenalis DSM 7454] Length = 436 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 113/426 (26%), Positives = 183/426 (42%), Gaps = 14/426 (3%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYAL 59 + FK +G L V++EKLA +TP Y Y I+ +F F +T + YA Sbjct: 4 NNFKNNKGLLEIGGVNVEKLAQKYKTPLYIYDQKLIKDTASSFVENFKSEKFETEIIYAT 63 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN V+ L D VS+ E+ AL A + E I F G KT +E+ A+ + I Sbjct: 64 KAFSNLYVLGLLNEYNLVFDCVSKEEIFVALKAGIKGENIHFHGNNKTKEELIYAIDNDI 123 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--Q 177 ++SE E L++ KKA R+NPD+ +THK I T + KFG+ I Sbjct: 124 SLIIIDSEDEYYLLDEILKDKKKKASCLLRINPDVKTDTHKFIQTSNADSKFGLNIRDEN 183 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQ-IESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + P + + G HIGSQ+ +A + H+++ Sbjct: 184 TEKIIEKIIENPNINLLGFHAHIGSQVKNLEFFKEEAKIMAEFTKNIQDKFKKCFSHLNL 243 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTK 289 GGG G + + + + + +L + +EPGR L++ G ++ + Sbjct: 244 GGGFGTRENLEDEDLDLEKFLKGLIVFMEDLFDKNKLSIKNLSIEPGRSLISKAGSILYR 303 Query: 290 V-ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 + S + +D M+D +RP+LY A + + N + + + G +CE+G Sbjct: 304 LGSSKITMEGYPLIFVDGGMSDNIRPSLYGAKY-SAILANKLDNEKNQTYRVGGKLCESG 362 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 D + KI DLL + GAY S YN L + V + + R + + Sbjct: 363 DILIEKVKIPKVERDDLLLVPFAGAYTYSMSSNYNKLLKPAVVFVEDGKDYCAVKRQSLE 422 Query: 409 ELIELD 414 +LI+ D Sbjct: 423 DLIKRD 428 >gi|310657748|ref|YP_003935469.1| diaminopimelate decarboxylase [Clostridium sticklandii DSM 519] gi|308824526|emb|CBH20564.1| diaminopimelate decarboxylase [Clostridium sticklandii] Length = 421 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 109/417 (26%), Positives = 177/417 (42%), Gaps = 13/417 (3%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAV 67 + +V LA TP Y S IE+ F T YA KA +A+ Sbjct: 4 NFEFCSVDSVYLAQKYSTPLYVMSQDIIEEKIDYIKVNFLDKYPRTYAYYASKAFLTKAM 63 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 K + G+D+VS GEL AL A + ++I+F G K+ DE++ AL+ GI V+ Sbjct: 64 AKIIKKSEMGIDVVSYGELYTALDAGINPDKIMFHGNNKSKDELEFALERGIGRIVVDGI 123 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY--A 185 SELK L + A A I R++P++ A+THK ISTG+ + KFG+ A A Sbjct: 124 SELKLLIELAGE-RFTAKILLRISPNVEAHTHKYISTGQLDSKFGLSFASKDLDEAIELA 182 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + G H+GSQ+ E+ ++ K +L ++++ GG + Sbjct: 183 IKSEHIDFKGFHFHVGSQLFDNEAHVESTKKAMELIKEIKDKYDYEIEDLNVGGGFGVRY 242 Query: 246 SDHRPPSSSDYASLIHQY--------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + P +Y + + ++ I +EPGR++VA+ GI + V S+K Sbjct: 243 TAEDEPMPLEYFTDAIMEEVIALIDKYEIIRPNIFIEPGRYIVAEAGITLYTVGSVKNIE 302 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 I I N D + G CE+GD + + + Sbjct: 303 SVRKYICIDGGMADNPRPALYQAKYSACIANKMYDEDTELVTVAGKCCESGDILIWDINL 362 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GD+L + TGAY S YN +M++ + +I R ++++L++ D Sbjct: 363 PKVERGDILAVMGTGAYNYSMSSNYNKLAKPAVVMIHDKEDRLIVQRESYEDLLKND 419 >gi|225465560|ref|XP_002275012.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 564 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 129/410 (31%), Positives = 220/410 (53%), Gaps = 5/410 (1%) Query: 7 FEGSLHAENVSLEKLAHVV-QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 +G L+ E + ++ + + V + PFY YS I +N+ + A +G+ +++ YA+KAN+N Sbjct: 151 EDGFLYCEGLRVQDVMNQVEKRPFYLYSKPQIARNFEAYREALEGLRSIIGYAIKANNNL 210 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ L LG G +VS ELR AL A R +F+G GK ++++ LA Q G++ Sbjct: 211 KILEHLRELGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDS 270 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 ++ ++ GKK + R+NPD++ H ++TG K KFGI ++ Sbjct: 271 EFDLDNIISAARIA-GKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAV 329 Query: 186 STLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-A 243 P K+ G H+GS I +++ F A L+ + ++R+ G I ++++GGGLGI Sbjct: 330 KAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDY 389 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 YH+ P+ D + + + +I+EPGR L+A+ LV +VI +K + K FV+ Sbjct: 390 YHAGAVLPTPRDLIDTVRELVLSRDLNLIIEPGRSLIANTCCLVNRVIGVKTNGTKNFVV 449 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D +M + +RP+LYDAY I + P D D+VGP+CE+ DF+ +R++ P G Sbjct: 450 IDGSMAELIRPSLYDAYQHIELVSPPPSDAQISTFDVVGPVCESADFLGKDRELPTPPRG 509 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 L + GAY + +YN ++ PE V + IR TF++ + Sbjct: 510 AGLVVHDAGAYCMSMASSYNLKMRPPEYWVEDDGSVSKIRHGETFEDHVR 559 >gi|224103381|ref|XP_002313033.1| predicted protein [Populus trichocarpa] gi|222849441|gb|EEE86988.1| predicted protein [Populus trichocarpa] Length = 482 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 135/411 (32%), Positives = 224/411 (54%), Gaps = 5/411 (1%) Query: 7 FEGSLHAENVSLEKLAHVV-QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 +G L+ E++ ++++ V + PFY YS I +N + +A G+ +++ YA+KAN+N Sbjct: 69 QDGFLYCESLKVQEIMESVEKRPFYLYSKPQITRNVEAYKDALQGLSSIIGYAIKANNNL 128 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ L LG G +VS ELR AL A R +F+G GK +D++ LA Q G++ NV+ Sbjct: 129 KILEHLRGLGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKLLDDLVLAAQEGVF-VNVD 187 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 SE +L+ + A GKK + R+NPD++ H ++TG K KFGI ++ Sbjct: 188 SEFDLENIVAAARIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAV 247 Query: 186 STLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-A 243 P K+ G H+GS I +++ F A L+ + ++R+ G + ++++GGGLGI Sbjct: 248 KAHPNELKLVGAHCHLGSTITKVDIFRDAAALMVNYIDEIRAQGFEVDYLNIGGGLGIDY 307 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 YHS P+ D + + + +I+EPGR L+A+ LV +V +K + K FV+ Sbjct: 308 YHSGAVLPTPRDLIDTVRELVLSRDLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFVV 367 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D +M + +RP+LYDAY I + + D+VGP+CE+ DF+ +R++ P G Sbjct: 368 IDGSMAELIRPSLYDAYQHIELVSPASPSAEVSTFDVVGPVCESADFLGKDRELPTPAKG 427 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 L + GAY + TYN ++ PE V + IR TF++ I Sbjct: 428 AGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDDGSVSKIRQGETFEDHIRF 478 >gi|296128907|ref|YP_003636157.1| diaminopimelate decarboxylase [Cellulomonas flavigena DSM 20109] gi|296020722|gb|ADG73958.1| diaminopimelate decarboxylase [Cellulomonas flavigena DSM 20109] Length = 458 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 123/438 (28%), Positives = 190/438 (43%), Gaps = 31/438 (7%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYALKA 61 +G++ +V + LA TP Y + + AF+ G V YA KA Sbjct: 19 DGAVRVADVDVRDLAAAHGTPAYVVDEADLRSRARAYRTAFETACAQVGTGVDVYYAGKA 78 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 +AV + + G +D S GEL ALAA VP I G K+ DE+ AL +G+ Sbjct: 79 LLTRAVARWVHDEGLRVDTASGGELAVALAAGVPGADIGLHGNNKSDDELRAALDAGVGR 138 Query: 122 FNVESESELKTLNQ----RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 V+S E+ L G AP+ RV ++A H+ IST ++ KFG+ + Sbjct: 139 IIVDSLVEVDRLAALVRAHRGPDGAPAPVMVRVTTGVHAGGHEFISTAHEDQKFGLSLAS 198 Query: 178 IHSLYAYASTL------PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHN 230 + L P + + G+ HIGSQI F A + + L G Sbjct: 199 DGGDSPALTALLRVVERPELHLLGIHSHIGSQILDPSGFAVAAQRVLALRATLHARTGVL 258 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADV 283 + +D+GGG GIAY P A + Q + ++ +EPGR +V Sbjct: 259 VDEVDLGGGYGIAYLPGDVPLDPGRIAKEVAQAVADAARELGTPLPRLSIEPGRAIVGPA 318 Query: 284 GILVTKVISIKKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 G+ + V ++K +T+V +D M+D +RP LY A++ + D + A Sbjct: 319 GLTLYTVGTVKPVRLDDGRVRTYVSVDGGMSDNIRPALYGAHYHAEVVSR-VSDAEPVLA 377 Query: 339 DIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ 397 +VG CE+GD + ++ R GDLL + TGAYG + YN P + V + Sbjct: 378 RVVGKHCESGDIVVHEVRLPGDVRAGDLLAVAATGAYGRSMASNYNLLTRPPVVAVTAGE 437 Query: 398 FHIIRPRMTFQELIELDS 415 ++ R T +L+ LD Sbjct: 438 SRVLVRRETVDDLLALDV 455 >gi|315103517|gb|EFT75493.1| diaminopimelate decarboxylase [Propionibacterium acnes HL050PA2] Length = 476 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 117/429 (27%), Positives = 182/429 (42%), Gaps = 20/429 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V++ +L +P Y + + + F +AF D V YA KA + + Sbjct: 45 DGIVEVAGVTVTELLSQYGSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTI 102 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G LD + GEL AL + RI G K+IDE+ LAL G+ V+S Sbjct: 103 ASWIDQEGLFLDTCTGGELITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSL 162 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ + Q G A + RV + A+TH+ I+T ++ KFG I ++ A Sbjct: 163 DEIMRIEQLCRENGWHARVMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRC 222 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAY 244 + + GV HIGSQI F A + L +Q G + +D+GGG GIAY Sbjct: 223 HTSDAIDLLGVHSHIGSQIFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAY 282 Query: 245 HSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 S P + A + + I LEPGR +V + + V ++K Sbjct: 283 TSQDSPATVESLAGALREIVTVEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVD 342 Query: 298 -----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + +V +D M+D +RP LY A + I N + + IVG CE GD + Sbjct: 343 LDTGAQRMYVSVDGGMSDNIRPALYAAEY-SAVIANRTSEVAPVLCRIVGKHCEAGDILV 401 Query: 353 LNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHII-RPRMTFQEL 410 + + PGD++ + GAY + YN + VN + ++ R L Sbjct: 402 RDVYLPGDVSPGDVIAVPGAGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDYL 461 Query: 411 IELDSIPAW 419 + LD P Sbjct: 462 LVLDPGPIR 470 >gi|168064981|ref|XP_001784435.1| predicted protein [Physcomitrella patens subsp. patens] gi|162664006|gb|EDQ50742.1| predicted protein [Physcomitrella patens subsp. patens] Length = 414 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 125/411 (30%), Positives = 215/411 (52%), Gaps = 11/411 (2%) Query: 11 LHAENVSLEKL----AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 ++ E+V ++ + V+ PFY YS + +NY + A G+++++ YA+KAN+N Sbjct: 1 MYCEDVRVQDIMDNEVEEVR-PFYLYSKRQLRRNYEAYQEALKGLNSIIGYAVKANNNLK 59 Query: 67 VIKTLAHLGSGLDIVSEGELR-RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ L LGSG +VS ELR R VF+G GK ++E++LA Q G+ Sbjct: 60 IMRCLRELGSGAVLVSGTELRLAVEHTGFDPARCVFNGNGKLLEELELAAQYGVLINVDS 119 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 +L + + + + GK+ + R+NPD++ H ++TG K KFGI ++ Sbjct: 120 EF-DLAQIIEASRNTGKRIKVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLGWFLEEV 178 Query: 186 S-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-A 243 +++ GV H+GS I +++ F A ++ D +++R I+++++GGGLGI Sbjct: 179 KKHSENLELVGVHCHLGSTITKVDVFRDAAVVMVDFVKKIRGENFTIKYLNIGGGLGIDY 238 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 YH P+ +D + +I+EPGR LVA+ V+ V +K + K F++ Sbjct: 239 YHKGAILPTPTDLIDTVRDLVTKEGLTLIIEPGRSLVANTSAFVSHVTGVKTNGTKDFIV 298 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D +M++ +RP+LY AY I ++ PA D+VGP+CE+ DF+ R++ P+ G Sbjct: 299 IDGSMSELIRPSLYGAYQHIEFVAPPAEGAEVKTFDVVGPVCESADFLGKERELPTPKRG 358 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV--NGSQFHIIRPRMTFQELIE 412 D + + GAY + TYN R+ PE V +G IR + I Sbjct: 359 DGIVVHDAGAYCMAMASTYNLRMRPPEYWVADDGKTVEKIRHAEQLDDHIR 409 >gi|157148390|ref|YP_001455709.1| diaminopimelate decarboxylase [Citrobacter koseri ATCC BAA-895] gi|157085595|gb|ABV15273.1| hypothetical protein CKO_04214 [Citrobacter koseri ATCC BAA-895] Length = 420 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 117/431 (27%), Positives = 188/431 (43%), Gaps = 29/431 (6%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + + L+AEN L +L P + Y I + FD +V +A KA Sbjct: 3 HSLNCTDTDLNAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALQQ-FD----VVRFAQKA 55 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 SN +++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 56 CSNIHILRLMREQGVKVDSVSLGEIERALAAGYDPQNH-PDDIVFTADVIDAATLARVSE 114 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 + + + + + + R+NP +K +TG + K GI + Sbjct: 115 LRIPVNAGSVDMLDQLGQVSPGHRVWLRINPGFGHGHSQKTNTGGENSKHGIWHTDLP-- 172 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A+ + + + I + ++ + +Q+ G +++ I GGGL Sbjct: 173 ---AALAVMQRHRLQLVGVHMHIGSGVDYGHLEQVCGAMVRQVIDFGQDLEAISAGGGLS 229 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKK 295 I YH + Y L + + K+ +EPGRFLVA G+LVT+V S+K+ Sbjct: 230 IPYHEGEEAVDTQHYFGLWNAAREQIARHLGHRVKLEIEPGRFLVAQSGVLVTQVRSVKE 289 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH---ADIVGPICETGDFIA 352 + FV++D ND MRP +Y +YH I + H + GP+CE+GD Sbjct: 290 MGRRHFVLVDAGFNDLMRPAMYGSYHHITALAADGRSLEHAPLLDTVVAGPLCESGDVFT 349 Query: 353 LN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 R + PGD L + TGAYGA S YNSR L+PE++ + + +IR R Sbjct: 350 QQEGGNVETRALPAVAPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGKARLIRRRQ 409 Query: 406 TFQELIELDSI 416 T +EL+ L+ Sbjct: 410 TIEELLALEVF 420 >gi|323464497|gb|ADX76650.1| diaminopimelate decarboxylase [Staphylococcus pseudintermedius ED99] Length = 421 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 119/422 (28%), Positives = 182/422 (43%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSN 64 G L SL+ LA TP Y I + + +AF D ++ YA KA + Sbjct: 7 QNGELTLGGTSLKTLAQSFGTPTIVYDEAQIRQQMRRYHSAFQQNDIGYVLSYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K A LD+VSEGEL AL A +RI F G KT EI AL+SGI F V Sbjct: 67 LQMVKLAAEEDFELDVVSEGELYTALEAGFDPQRIHFHGNNKTKHEIRYALESGIGYFVV 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E+ + Q A + RVNP + A+TH+ I TG+++ KFG+ + +L A Sbjct: 127 DALDEIDLIEQYATKPV---DVLLRVNPGVEAHTHEFIQTGQEKSKFGLSLKHGLALEAV 183 Query: 185 ASTLPGVK--ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 + G+ HIGSQI++ + K++ + + I +++GGG Sbjct: 184 EKIRNTNNIVLKGIHFHIGSQIEETTGMIETAKMVLNWLDEHA---IMIDLLNLGGGFSA 240 Query: 243 AYHSDHRPPSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y + Q + +EPGR +VA+ G+ + +V +IK Sbjct: 241 QYVEGDQSFDIEAGITEIVQAIKAECQQLKYPIPTLSIEPGRSIVAEAGVTLYEVGTIKD 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M+D +R LYDA ++ I + I G +CE+GD I Sbjct: 301 IPGVNKYVSIDGGMSDHIRTALYDAKYQALLINR--NETPDETVTIAGKLCESGDIIIHE 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN V + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILTTGAYHYSMASNYNQMQKPSVFFVKDGKAREVVKRQSLRQLIIN 418 Query: 414 DS 415 D Sbjct: 419 DV 420 >gi|298245000|ref|ZP_06968806.1| diaminopimelate decarboxylase [Ktedonobacter racemifer DSM 44963] gi|297552481|gb|EFH86346.1| diaminopimelate decarboxylase [Ktedonobacter racemifer DSM 44963] Length = 447 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 111/424 (26%), Positives = 177/424 (41%), Gaps = 19/424 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG----MDTMVCYALKANS 63 + LH +L LA TP Y + I + AF+ + YA KA Sbjct: 21 DDVLHIAGHALPALAEQYGTPLYIFDRATIAHACQRYFQAFERYYQASAVRILYASKAYL 80 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 + V + +A GLDIVS GEL A A P ERI F G K+ E+ LALQ G+ Sbjct: 81 SPLVARIIAEQDMGLDIVSGGELTVAQRAGFPMERISFHGNNKSTVELKLALQLGVGRII 140 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 +++ SEL+ L A LG++ + RV P + +TH+ + TG KFG P+ + A Sbjct: 141 LDNWSELERLTHLADELGQRPAVLLRVAPGVETDTHRYLQTGHAASKFGFPLQNGEAKTA 200 Query: 184 YASTLPGVKISGVDMHIGSQID---QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L K+ V +H S LL + + GGG Sbjct: 201 ILRILGEDKLHLVGLHAHSGTMLRETRPYEECLVHLLSLAKAIYDETQWWPEEVSPGGGW 260 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNL----------QCKIILEPGRFLVADVGILVTKV 290 GI P A + + +ILEPGR +VA G+ + ++ Sbjct: 261 GIDTPDQLGTPGLDQLAQALQHQMQVMLASISNGTLPAPTLILEPGRSIVARAGVALYRI 320 Query: 291 ISIKKSA-DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 ++K + T++ +D M D +RP LY A + + + + + + G CE+GD Sbjct: 321 GALKATPAGTTYLFVDGGMADNIRPALYHALYTALPVEHISVPGS-VDYCVSGRYCESGD 379 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + N ++ R G+LL + GAY + YN ++V + ++ R T+ + Sbjct: 380 MLIDNVRLPAMREGELLLLPLAGAYCLPMASNYNLVPRPGVLLVEEGRVQVMERRETYDD 439 Query: 410 LIEL 413 ++ Sbjct: 440 ILAR 443 >gi|324114871|gb|EGC08837.1| diaminopimelate decarboxylase [Escherichia fergusonii B253] gi|325498415|gb|EGC96274.1| diaminopimelate decarboxylase [Escherichia fergusonii ECD227] Length = 420 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 122/422 (28%), Positives = 191/422 (45%), Gaps = 29/422 (6%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L AEN L L P + Y I + FD +V +A KA SN +++ Sbjct: 12 LTAEN--LLTLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHILRL 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + G +D VS GE+ RALAA + T D ID A + + + + Sbjct: 65 MREQGVKVDSVSLGEIERALAAGYDPLTS-PDDIVFTADVIDSATLARVSELRIPVNAGS 123 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + ++ + + RVNP +K +TG + K GI + + A + Sbjct: 124 VDMLEQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHTDLPAALAVIARYEL 183 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 K+ G+ MHIGS + + ++ + Q+ G +++ I GGGL I Y Sbjct: 184 -KLVGIHMHIGSGV----DYAHLEQVCGAMVSQVIEFGQDLEAISAGGGLSIPYRDGEEA 238 Query: 251 PSSSDYASLIHQ------YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + Y L + + + K+ +EPGRFLVA G+L+ +V S+K+ + FV++ Sbjct: 239 VDTEHYFGLWNAAREQIAHHLGHRVKLEIEPGRFLVAQSGVLIAQVRSVKQMGRRHFVLI 298 Query: 305 DVAMNDFMRPTLYDAYHEINY---IVNPAGDRLHIHADIVGPICETGDFIALN------- 354 D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 299 DAGFNDLMRPAMYGSYHRITALAADGRSFDNTPVVETVVAGPLCESGDVFTQQEGGTVET 358 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R++ PGD L + TGAYGA S YNSR L+PE++ + Q +IR R T +EL+ L+ Sbjct: 359 RELPQVAPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALE 418 Query: 415 SI 416 I Sbjct: 419 LI 420 >gi|284032951|ref|YP_003382882.1| diaminopimelate decarboxylase [Kribbella flavida DSM 17836] gi|283812244|gb|ADB34083.1| diaminopimelate decarboxylase [Kribbella flavida DSM 17836] Length = 467 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 127/423 (30%), Positives = 189/423 (44%), Gaps = 19/423 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G+L V L L +P Y F AF MD V YA KA V Sbjct: 44 DGALEIGGVELRDLVAEHGSPAYVLDEDDFRTRARAFRRAFKDMD--VYYAGKAFLCTTV 101 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G LDI S GEL AL A R+ F G K+ E+ AL +G+ V+S Sbjct: 102 VRWVMEEGLNLDICSGGELAVALRAGADPSRLGFHGNNKSEQELARALDAGVGRIIVDSL 161 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ L A G AP+ RV + A+TH+ I+T ++ KFG I + A A Sbjct: 162 FEIDRLVALAAERGVVAPVMVRVTAGVEAHTHEYIATAHEDQKFGFSITSGAAFEAVAKV 221 Query: 188 LPGVKIS--GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGIAY 244 ++ G+ HIGSQI F A K L L ++ G ++ +D+GGG GIAY Sbjct: 222 NQAAELRLLGLHSHIGSQIFDTSGFELAAKRLIALHARVSDELGVDMPELDLGGGFGIAY 281 Query: 245 HSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKV-----IS 292 + P + A+ + +G ++ +EPGR +V V V ++ Sbjct: 282 TTQDDPADPAQLATEMGKIVEHECRAYGVEVPRVSIEPGRAIVGPAVCTVYSVGTVKEVA 341 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + A +T+V +D M+D +R LYDA + N + D A +VG CE+GD + Sbjct: 342 LDAGASRTYVSVDGGMSDNIRTALYDADYSCTL-ANRSSDATPTLARVVGKHCESGDIVV 400 Query: 353 LNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + PGDL+ + TGAY + YN P I V + ++ R T +L+ Sbjct: 401 KDEFLPSDVTPGDLVAVPGTGAYCRSMASNYNHVPRPPVIAVKDGRTRVVVRRETEDDLL 460 Query: 412 ELD 414 LD Sbjct: 461 LLD 463 >gi|170765517|ref|ZP_02900328.1| diaminopimelate decarboxylase [Escherichia albertii TW07627] gi|170124663|gb|EDS93594.1| diaminopimelate decarboxylase [Escherichia albertii TW07627] Length = 420 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 115/425 (27%), Positives = 180/425 (42%), Gaps = 29/425 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAVLKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSIDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALEVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTKHYYGLWNAAREQIARHLGHHVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRRF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I+ + + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEYAPTVETVVAGPLCESGDVFTQQEGGK 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T EL+ Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTISELL 415 Query: 412 ELDSI 416 L+ + Sbjct: 416 ALELL 420 >gi|283786539|ref|YP_003366404.1| diaminopimelate decarboxylase [Citrobacter rodentium ICC168] gi|282949993|emb|CBG89621.1| diaminopimelate decarboxylase [Citrobacter rodentium ICC168] Length = 420 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 121/431 (28%), Positives = 187/431 (43%), Gaps = 30/431 (6%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M Y + L A+N L +L P + Y I + FD +V +A Sbjct: 1 MPHSLYAADTDLTAQN--LLRLPAEFGCPVWVYDAQIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA + + T D ID A S + Sbjct: 54 KACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDNATLSRV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 + + + + + + RVNP +K +TG + K GI + Sbjct: 113 SELQIPVNAGSVDMLAQLGEVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A + I I + ++ + +Q+ G ++Q I GGG Sbjct: 173 QALAV-----MQQYQLTLAGIHMHIGSGVDYGHLEQVCGAMVRQVVEFGQDLQAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I Y + Y L + K+ +EPGRFLVA+ G+LVT+V S+ Sbjct: 228 LSIPYREGEEAVDTRHYFGLWNAAREQIARHLGHPVKLEIEPGRFLVAESGVLVTQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINY---IVNPAGDRLHIHADIVGPICETGDF 350 K+ ++ FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 288 KQMGNRHFVLVDAGFNDLMRPAMYGSYHHITALAADGRSLENAPQVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + +PGD L + TGAYGA S YNSR L+PE++ + Q +IR Sbjct: 348 FTQQEGGNVETRTLPAVKPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRR 407 Query: 404 RMTFQELIELD 414 R T +EL+ L+ Sbjct: 408 RQTIEELLALE 418 >gi|218550088|ref|YP_002383879.1| diaminopimelate decarboxylase [Escherichia fergusonii ATCC 35469] gi|218357629|emb|CAQ90268.1| diaminopimelate decarboxylase, PLP-binding [Escherichia fergusonii ATCC 35469] Length = 420 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 122/422 (28%), Positives = 190/422 (45%), Gaps = 29/422 (6%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L AEN L L P + Y I + FD +V +A KA SN +++ Sbjct: 12 LTAEN--LLTLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHILRL 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + G +D VS GE+ RALAA + T D ID A + + + + Sbjct: 65 MREQGVKVDSVSLGEIERALAAGYDPLTS-PDDIVFTADVIDSATLARVSELRIPVNAGS 123 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + ++ + + RVNP +K +TG + K GI + + A + Sbjct: 124 VDMLEQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHTDLPAALAVIARYEL 183 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 K+ G+ MHIGS + + ++ + Q+ G ++ I GGGL I Y Sbjct: 184 -KLVGIHMHIGSGV----DYAHLEQVCGAMVSQVIEFGQELEAISAGGGLSIPYRDGEEA 238 Query: 251 PSSSDYASLIHQ------YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + Y L + + + K+ +EPGRFLVA G+L+ +V S+K+ + FV++ Sbjct: 239 VDTEHYFGLWNAAREQIAHHLGHRVKLEIEPGRFLVAQSGVLIAQVRSVKQMGRRHFVLI 298 Query: 305 DVAMNDFMRPTLYDAYHEINY---IVNPAGDRLHIHADIVGPICETGDFIALN------- 354 D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 299 DAGFNDLMRPAMYGSYHRITALAADGRSFDNTPVVETVVAGPLCESGDVFTQQEGGTVET 358 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R++ PGD L + TGAYGA S YNSR L+PE++ + Q +IR R T +EL+ L+ Sbjct: 359 RELPQVAPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALE 418 Query: 415 SI 416 I Sbjct: 419 LI 420 >gi|255671797|gb|ACU26531.1| diaminopimelate decarboxylase [Glycine max] Length = 488 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 131/411 (31%), Positives = 222/411 (54%), Gaps = 5/411 (1%) Query: 7 FEGSLHAENVSLEKLAHVVQT-PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 +G L+ E + + + V+ PFY YS I +N + +A +G+++++ YA+KAN++ Sbjct: 75 EDGYLYCEGLKVHDIMESVERRPFYLYSKPQITRNVEAYKDALEGLNSIIGYAIKANNDL 134 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ L HLG G +VS EL+ AL A R +F+G GK ++++ LA Q G++ N++ Sbjct: 135 KILEHLRHLGCGAVLVSGNELKLALRAGFDPTRCIFNGNGKILEDLVLAAQEGVF-VNID 193 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 SE +L+ + + A GKK + R+NPD++ H ++TG K KFGI ++ Sbjct: 194 SEFDLENIVEAAKRAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQCFLDAV 253 Query: 186 STLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-A 243 P K+ G H+GS I +++ F A ++ + Q+R G + ++++GGGLGI Sbjct: 254 KEHPNELKLVGAHCHLGSTITKVDIFRDAATIMINYIDQIRDQGFEVDYLNIGGGLGIDY 313 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 YHS P+ D + + +I+EPGR L+A+ LV +V +K + K F++ Sbjct: 314 YHSGAILPTPRDLIDTVRDLVISRGLNLIIEPGRSLIANTCCLVNRVTGVKTNGSKNFIV 373 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D +M + +RP+LYDAY I + + D+VGP+CE+ DF+ R++ P G Sbjct: 374 IDGSMAELIRPSLYDAYQHIELVSPAPSNAETETFDVVGPVCESADFLGKGRELPTPAKG 433 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 L + GAY + TYN ++ PE V + IR TF++ I Sbjct: 434 TGLVVHDAGAYCMSIASTYNLKMRPPEYWVEDDGSVSKIRHGETFEDHIRF 484 >gi|282916666|ref|ZP_06324424.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus D139] gi|283770471|ref|ZP_06343363.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus H19] gi|282319153|gb|EFB49505.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus D139] gi|283460618|gb|EFC07708.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus H19] Length = 421 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 194/422 (45%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + +AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHHAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 IQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I + A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 DKVQQTKHLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKE---QDIQVELLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKK 295 Y I + +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKVLGVNAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPGINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|227501672|ref|ZP_03931721.1| diaminopimelate decarboxylase [Corynebacterium accolens ATCC 49725] gi|227077697|gb|EEI15660.1| diaminopimelate decarboxylase [Corynebacterium accolens ATCC 49725] Length = 445 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 116/427 (27%), Positives = 192/427 (44%), Gaps = 20/427 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + V L LA QTP Y + + AF G D V YA KA ++ Sbjct: 20 EDGVVTVAEVPLPDLAEEFQTPLYVFDEDDFRSRCQDMARAFGGPDH-VHYASKAFISKK 78 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ + G LD + EL+ ALAA PA RI G K + + L + +G+ +++ Sbjct: 79 VVQWVNEEGLCLDAAALNELKIALAAGFPAARITAHGNNKDEEYLRLCVDAGVGHVVIDN 138 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E EL+ LN+ A G P+ RV P ++A+TH+ ++T ++ KFGI + + A Sbjct: 139 EQELEELNRIAGEAGVVQPVMIRVKPGVDAHTHEFVATSHEDQKFGISLATGAAFAAAKR 198 Query: 187 TLPGVKIS--GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGIA 243 L + G+ H+GSQ+ E F A + + +L +Q+ + +D+GGG GI Sbjct: 199 CLEVDNLHLSGLHCHVGSQVFNAEGFKLAAERVLELYRQIHTELGVDLAELDLGGGFGIP 258 Query: 244 YHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKV------ 290 Y A + + +++EPGR LVA + V +V Sbjct: 259 YMPYEEALDIDRVAKDMLRAVDQTAEDLDIKAPFLLVEPGRSLVAGSAVTVYRVGTVKDV 318 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + ++ +D M+D +RP LY + ++ +VN D + + IVG CE+GD Sbjct: 319 ETGKADLPVRRYISIDGGMSDNIRPALYSSEYD-VRLVNRFSDGEMVPSRIVGFHCESGD 377 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + ++ +PGDLL TG Y + S YN + + + R T + Sbjct: 378 ILLEEGELPNDIQPGDLLAFAATGGYQYMMSSRYNGAVRPAVVATRVGNTKPMLRRETIE 437 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 438 DLLSLEV 444 >gi|306835847|ref|ZP_07468843.1| diaminopimelate decarboxylase [Corynebacterium accolens ATCC 49726] gi|304568264|gb|EFM43833.1| diaminopimelate decarboxylase [Corynebacterium accolens ATCC 49726] Length = 445 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 117/427 (27%), Positives = 192/427 (44%), Gaps = 20/427 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + V L LA QTP Y + + AF G D V YA KA ++ Sbjct: 20 EDGVVTVAEVPLPDLAEEFQTPLYVFDEDDFRSRCQDMARAFGGPDH-VHYASKAFISKK 78 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ + G LD + EL+ ALAA PA RI G K + + L + +G+ +++ Sbjct: 79 VVQWVNEEGLCLDAAALNELKIALAAEFPAARITAHGNNKDEEYLRLCVDAGVGHVVIDN 138 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E EL+ LN+ A G P+ RV P ++A+TH+ I+T ++ KFGI + + A Sbjct: 139 EQELEELNRIAGEAGVVQPVMIRVKPGVDAHTHEFIATSHEDQKFGISLATGAAFAAAKR 198 Query: 187 TLPGVKIS--GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGIA 243 L + G+ H+GSQ+ E F A + + +L +Q+ + +D+GGG GI Sbjct: 199 CLEVDNLHLSGLHCHVGSQVFNAEGFKLAAERVLELYRQIHTELGVDLADLDLGGGFGIP 258 Query: 244 YHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKV------ 290 Y A + + +++EPGR LVA + V +V Sbjct: 259 YMPYEEALDIDRVAQDMLRAVDQTAEELDIKAPFLLVEPGRSLVAGSAVTVYRVGTVKDV 318 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + ++ +D M+D +RP LY + ++ +VN D + + IVG CE+GD Sbjct: 319 ETGKADLPVRRYISIDGGMSDNIRPALYGSEYD-VRLVNRFSDGEMVPSRIVGFHCESGD 377 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + ++ +PGDLL TG Y + S YN + + + R T + Sbjct: 378 ILLEEGELPNDIQPGDLLAFAATGGYQYMMSSRYNGAVRPAVVATRVGNTKPMLRRETIE 437 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 438 DLLSLEV 444 >gi|151221523|ref|YP_001332345.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. Newman] gi|150374323|dbj|BAF67583.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. Newman] Length = 421 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 193/422 (45%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQNFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 IQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I + A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 DKVQQSKHLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKEQG---IQVELLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y I +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|323441184|gb|EGA98891.1| diaminopimelate decarboxylase [Staphylococcus aureus O11] gi|323444053|gb|EGB01664.1| diaminopimelate decarboxylase [Staphylococcus aureus O46] Length = 421 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 193/422 (45%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 IQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ + + A + RVNP + A+TH+ I TG+++ KFG+ I + A Sbjct: 127 DSLEEIELIERYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 DKVQQSKHLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKEQG---IQVELLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y I +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + ++ I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEKADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|283470614|emb|CAQ49825.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ST398] Length = 421 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 194/422 (45%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 LQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I ++ A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 NKVQQSKHLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKEQG---IQVELLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y I +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|170290535|ref|YP_001737351.1| diaminopimelate decarboxylase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174615|gb|ACB07668.1| diaminopimelate decarboxylase [Candidatus Korarchaeum cryptofilum OPF8] Length = 383 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 111/397 (27%), Positives = 182/397 (45%), Gaps = 20/397 (5%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 + V L ++A + TP Y +++NYL A ++ YA KAN ++K Sbjct: 1 MRVNGVDLSEIAELFGTPTYVIDLDRVKENYLRLDKAIK-CPHVIAYAYKANHEPELVKL 59 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 LA LGSG + S + A + VP E+ V G + ++ A+ G Sbjct: 60 LAKLGSGATVPSAFGVILARISGVPPEKTVLVGPSPSRGDLIEAMDFGAIISIESHS--- 116 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 A+ +A + RVNP + A + + TG K KFG+P + SL+ Sbjct: 117 ---QANALRSIGRANVMVRVNPGVGAGAYPGLVTGGKRSKFGLPPEEALSLFNSLK--KD 171 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ G HIGSQI + F A +++ L +++ GG +S+ P Sbjct: 172 MRALGFHTHIGSQIFSTDPFRAALDVIKGLAERVGGVEIVDL-----GGGLGVPYSNESP 226 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 +YA L+ + + K+ LE GR++VAD G L+++V +K+ + ++++D MND Sbjct: 227 FPLEEYAELVCERVREMGTKLFLETGRYIVADAGYLLSRVNYVKEVGGEKWLLIDAGMND 286 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 +RP LY A HEI + GP+CE+ DF ++ + GDL+ + Sbjct: 287 LIRPALYGARHEIICEGEG-----RERVLVAGPVCESSDFFGEY-ELPKLKEGDLIAFKN 340 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 GAYG + YN R L + + G +F ++RPR F Sbjct: 341 AGAYGFSMASRYNLRPLPAVVGIEGGRFRLLRPREDF 377 >gi|15924390|ref|NP_371924.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Mu50] gi|15926980|ref|NP_374513.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus N315] gi|21283017|ref|NP_646105.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MW2] gi|49486241|ref|YP_043462.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MSSA476] gi|57651900|ref|YP_186287.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus COL] gi|87160810|ref|YP_493990.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195127|ref|YP_499928.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267888|ref|YP_001246831.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus JH9] gi|150393951|ref|YP_001316626.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus JH1] gi|156979719|ref|YP_001441978.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Mu3] gi|161509566|ref|YP_001575225.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140627|ref|ZP_03565120.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315275|ref|ZP_04838488.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732037|ref|ZP_04866202.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733353|ref|ZP_04867518.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH130] gi|255006189|ref|ZP_05144790.2| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795545|ref|ZP_05644524.1| diaminopimelate decarboxylase [Staphylococcus aureus A9781] gi|258413353|ref|ZP_05681629.1| diaminopimelate decarboxylase [Staphylococcus aureus A9763] gi|258420540|ref|ZP_05683482.1| diaminopimelate decarboxylase [Staphylococcus aureus A9719] gi|258434688|ref|ZP_05688762.1| diaminopimelate decarboxylase [Staphylococcus aureus A9299] gi|258444736|ref|ZP_05693065.1| diaminopimelate decarboxylase [Staphylococcus aureus A8115] gi|258447429|ref|ZP_05695573.1| diaminopimelate decarboxylase [Staphylococcus aureus A6300] gi|258449270|ref|ZP_05697373.1| diaminopimelate decarboxylase [Staphylococcus aureus A6224] gi|258452193|ref|ZP_05700208.1| diaminopimelate decarboxylase [Staphylococcus aureus A5948] gi|258454650|ref|ZP_05702614.1| diaminopimelate decarboxylase [Staphylococcus aureus A5937] gi|262050355|ref|ZP_06023198.1| diaminopimelate decarboxylase [Staphylococcus aureus D30] gi|262053092|ref|ZP_06025263.1| diaminopimelate decarboxylase [Staphylococcus aureus 930918-3] gi|282892893|ref|ZP_06301128.1| diaminopimelate decarboxylase [Staphylococcus aureus A8117] gi|282927787|ref|ZP_06335400.1| diaminopimelate decarboxylase [Staphylococcus aureus A9765] gi|284024400|ref|ZP_06378798.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 132] gi|294850735|ref|ZP_06791454.1| diaminopimelate decarboxylase [Staphylococcus aureus A9754] gi|295406347|ref|ZP_06816154.1| diaminopimelate decarboxylase [Staphylococcus aureus A8819] gi|296275260|ref|ZP_06857767.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MR1] gi|297244576|ref|ZP_06928459.1| diaminopimelate decarboxylase [Staphylococcus aureus A8796] gi|300912029|ref|ZP_07129472.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH70] gi|304381023|ref|ZP_07363678.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|11991217|gb|AAG42251.1|AF306669_8 diaminopimelate decarboxylase [Staphylococcus aureus] gi|13701197|dbj|BAB42492.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus N315] gi|14247171|dbj|BAB57562.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Mu50] gi|21204456|dbj|BAB95153.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MW2] gi|49244684|emb|CAG43117.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MSSA476] gi|57286086|gb|AAW38180.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus COL] gi|87126784|gb|ABD21298.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202685|gb|ABD30495.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740957|gb|ABQ49255.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus JH9] gi|149946403|gb|ABR52339.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus JH1] gi|156721854|dbj|BAF78271.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Mu3] gi|160368375|gb|ABX29346.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724228|gb|EES92957.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728621|gb|EES97350.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH130] gi|257789517|gb|EEV27857.1| diaminopimelate decarboxylase [Staphylococcus aureus A9781] gi|257839917|gb|EEV64385.1| diaminopimelate decarboxylase [Staphylococcus aureus A9763] gi|257843488|gb|EEV67895.1| diaminopimelate decarboxylase [Staphylococcus aureus A9719] gi|257849049|gb|EEV73031.1| diaminopimelate decarboxylase [Staphylococcus aureus A9299] gi|257850229|gb|EEV74182.1| diaminopimelate decarboxylase [Staphylococcus aureus A8115] gi|257853620|gb|EEV76579.1| diaminopimelate decarboxylase [Staphylococcus aureus A6300] gi|257857258|gb|EEV80156.1| diaminopimelate decarboxylase [Staphylococcus aureus A6224] gi|257860130|gb|EEV82963.1| diaminopimelate decarboxylase [Staphylococcus aureus A5948] gi|257863033|gb|EEV85797.1| diaminopimelate decarboxylase [Staphylococcus aureus A5937] gi|259159015|gb|EEW44088.1| diaminopimelate decarboxylase [Staphylococcus aureus 930918-3] gi|259161554|gb|EEW46153.1| diaminopimelate decarboxylase [Staphylococcus aureus D30] gi|269940895|emb|CBI49278.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TW20] gi|282592041|gb|EFB97069.1| diaminopimelate decarboxylase [Staphylococcus aureus A9765] gi|282764890|gb|EFC05015.1| diaminopimelate decarboxylase [Staphylococcus aureus A8117] gi|285817078|gb|ADC37565.1| Diaminopimelate decarboxylase [Staphylococcus aureus 04-02981] gi|294822411|gb|EFG38861.1| diaminopimelate decarboxylase [Staphylococcus aureus A9754] gi|294968935|gb|EFG44957.1| diaminopimelate decarboxylase [Staphylococcus aureus A8819] gi|297178606|gb|EFH37852.1| diaminopimelate decarboxylase [Staphylococcus aureus A8796] gi|300886275|gb|EFK81477.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH70] gi|302751229|gb|ADL65406.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340439|gb|EFM06378.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312829795|emb|CBX34637.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315131208|gb|EFT87192.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus CGS03] gi|315195912|gb|EFU26277.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus CGS01] gi|320140792|gb|EFW32641.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MRSA131] gi|320142184|gb|EFW34002.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314076|gb|AEB88489.1| Diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus T0131] gi|329725312|gb|EGG61796.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 21189] gi|329727699|gb|EGG64155.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 21172] Length = 421 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 193/422 (45%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 IQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I + A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 DKVQQSKHLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKEQG---IQVELLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y I +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|319892399|ref|YP_004149274.1| Diaminopimelate decarboxylase [Staphylococcus pseudintermedius HKU10-03] gi|317162095|gb|ADV05638.1| Diaminopimelate decarboxylase [Staphylococcus pseudintermedius HKU10-03] Length = 421 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 119/422 (28%), Positives = 182/422 (43%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSN 64 G L SL+ LA TP Y I + + +AF D ++ YA KA + Sbjct: 7 QNGELTLGGTSLKTLAQSFGTPTIVYDEAQIRQQMRRYHSAFQQNDIGYVLSYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K A LD+VSEGEL AL A +RI F G KT EI AL+SGI F V Sbjct: 67 LQMVKLAAEEDFELDVVSEGELYTALEAGFDPQRIHFHGNNKTKHEIRYALESGIGYFVV 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E+ + Q A + RVNP + A+TH+ I TG+++ KFG+ + +L A Sbjct: 127 DALDEIDLIEQYATKPV---DVLLRVNPGVEAHTHEFIQTGQEKSKFGLSLKHGLALEAV 183 Query: 185 ASTLPGVK--ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 + G+ HIGSQI++ + K++ + + I +++GGG Sbjct: 184 EKIRNTNNIVLKGIHFHIGSQIEETTGMIETAKMVLNWLDEHA---ITIDLLNLGGGFSA 240 Query: 243 AYHSDHRPPSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y + Q + +EPGR +VA+ G+ + +V +IK Sbjct: 241 QYVEGDQSFDIEAGITEIVQAIKAECQQLKYPIPTLSIEPGRSIVAEAGVTLYEVGTIKD 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +D M+D +R LYDA ++ I + I G +CE+GD I Sbjct: 301 IPGVNKYVSIDGGMSDHIRTALYDAKYQALLINR--NETPDETVTIAGKLCESGDIIIHE 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN V + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILATGAYHYSMASNYNQMQKPSVFFVKDGKAREVVKRQSLRQLIIN 418 Query: 414 DS 415 D Sbjct: 419 DV 420 >gi|49483590|ref|YP_040814.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425464|ref|ZP_05601889.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428124|ref|ZP_05604522.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430755|ref|ZP_05607137.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 68-397] gi|257433515|ref|ZP_05609873.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus E1410] gi|257436356|ref|ZP_05612403.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M876] gi|282903980|ref|ZP_06311868.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C160] gi|282905745|ref|ZP_06313600.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908716|ref|ZP_06316534.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282914188|ref|ZP_06321975.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M899] gi|282919110|ref|ZP_06326845.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C427] gi|283958162|ref|ZP_06375613.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus A017934/97] gi|293501215|ref|ZP_06667066.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 58-424] gi|293510176|ref|ZP_06668884.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M809] gi|295427913|ref|ZP_06820545.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591126|ref|ZP_06949764.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MN8] gi|49241719|emb|CAG40409.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271921|gb|EEV04059.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257274965|gb|EEV06452.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278883|gb|EEV09502.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 68-397] gi|257281608|gb|EEV11745.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus E1410] gi|257284638|gb|EEV14758.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M876] gi|282316920|gb|EFB47294.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C427] gi|282322256|gb|EFB52580.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M899] gi|282326980|gb|EFB57275.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331037|gb|EFB60551.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595598|gb|EFC00562.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C160] gi|283790311|gb|EFC29128.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus A017934/97] gi|291096220|gb|EFE26481.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 58-424] gi|291467120|gb|EFF09638.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M809] gi|295128271|gb|EFG57905.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576012|gb|EFH94728.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MN8] gi|315195292|gb|EFU25679.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus CGS00] Length = 421 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 194/422 (45%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 LQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I ++ A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 NKVQQSKYLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKE---QDIQVELLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y I +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|322369890|ref|ZP_08044452.1| diaminopimelate decarboxylase [Haladaptatus paucihalophilus DX253] gi|320550226|gb|EFW91878.1| diaminopimelate decarboxylase [Haladaptatus paucihalophilus DX253] Length = 415 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 122/405 (30%), Positives = 197/405 (48%), Gaps = 10/405 (2%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + L+ LA TP Y + +NY + AF D V +A KAN+++AV++TL Sbjct: 20 DARLDDLADEYDTPLYVIDLERVRENYARLAAAFP--DADVHFAAKANTSRAVLETLEAE 77 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+ ++ S GE RA AA ER+ ++ V ++D A++ + Sbjct: 78 GASIECASAGETERAFAAGFEGERVHYTAVNPPGIDLDRAVELAADHPGLTVTVGAADTI 137 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 R G + RVNP + A H+K+ T + KFG+P + SL A + Sbjct: 138 DRLAERGYDGRLCLRVNPGVGAGHHEKVRT-GADAKFGVPYDRAASLLESA--ADDFDVV 194 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+ H GS I + +L+ + + R+ +++ +DVGGG G+ YH D P Sbjct: 195 GIHAHAGSGI-SGDDLGNHRELVSRMGELARTIDPDLEFVDVGGGFGVPYHPDDPPLDLE 253 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 A G+L +++EPGR+LVAD G+L+T+V ++K++ + T V +D M +RP Sbjct: 254 SVADATRDALGDLDATLVVEPGRYLVADAGVLLTRVNTVKEAPETTVVGVDAGMTALVRP 313 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 LYD+YH I + D + + GPICE+ D + +A P GDLL + GAY Sbjct: 314 ALYDSYHHIR---SVGADGQAVETTVAGPICESSDTFGTH-LLADPTRGDLLAVGNAGAY 369 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 G + YNSR ++V+G + + R T ++I ++ W Sbjct: 370 GYEMASQYNSRPRPAVVVVDGDRTGVAHRRETHADVIATETEVTW 414 >gi|282929364|ref|ZP_06336929.1| diaminopimelate decarboxylase [Staphylococcus aureus A10102] gi|282589064|gb|EFB94166.1| diaminopimelate decarboxylase [Staphylococcus aureus A10102] Length = 421 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 192/422 (45%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 IQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I + A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ + +++GGG GI Sbjct: 184 DKVQQSKHLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKEQG---IQVDLLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y I +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|37525159|ref|NP_928503.1| diaminopimelate decarboxylase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784585|emb|CAE13485.1| diaminopimelate decarboxylase (DAP decarboxylase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 436 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 117/416 (28%), Positives = 190/416 (45%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL +L TP + Y + I + FD +V +A KA SN +++ + G Sbjct: 26 SLGRLPETYGTPLWVYDSETIIQKINLLCQ-FD----VVRFAQKACSNTHILRLMREYGV 80 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A S + T D ID++ + ++ + + ++ Sbjct: 81 KVDAVSLGEIERALRAGFCP-GQEVSDIIFTADLIDVSTLQRVTELDIPVNAGSIDMLEQ 139 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 K P+ R+NP +K +TG + K GI + K+ G+ Sbjct: 140 IGQYKKGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYQNLPQAIEKIRHYGL-KLLGL 198 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + +H + + +Q+ G +IQ I GGGL YH + + Y Sbjct: 199 HMHIGSGV----DYHHLASVCNAMVEQVILCGEDIQAISAGGGLSTPYHQGDERINIAHY 254 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + ++ +EPGRFLVA+ G+L+T+V ++K+ ++ +V++D ND Sbjct: 255 FGLWDDARKRIEQHLGHKIELEIEPGRFLVAESGVLMTEVRAVKQMGNRNYVLVDAGFND 314 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHAD---IVGPICETGDFIAL-------NRKIALP 360 MRP +Y +YH I+ + + + GP+CE+GD R + Sbjct: 315 LMRPVMYGSYHHISVLPADGRKIEQLPLRETLVAGPLCESGDIFTQVEGGGIAPRALPPV 374 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L TGAYGA S YNSR LI E++ + +IR R T +EL+ L+ + Sbjct: 375 QVGDYLVFHDTGAYGASMSSNYNSRPLISEVLFVNGKPQLIRRRQTIEELLALEEV 430 >gi|50954436|ref|YP_061724.1| diaminopimelate decarboxylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950918|gb|AAT88619.1| diaminopimelate decarboxylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 471 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 114/431 (26%), Positives = 189/431 (43%), Gaps = 26/431 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYL----TFSNAFDGMD--TMVCYALKA 61 +G L V + LA TP Y + + F AF G+ V YA KA Sbjct: 35 DGVLSVGGVPVTALAERFGTPLYVVDEAEVRERAADVRAAFQEAFAGVGTAAKVYYAGKA 94 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + V + +A G +D+ S GEL ALAA V A+R+ F G K+ EI+ A+ +G+ Sbjct: 95 FLSIEVARWMAGAGLNIDVCSGGELAVALAAGVAADRLGFHGNNKSEAEIEAAVSAGVGA 154 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 ++S E+ + A G P+ RVN ++A+TH ++T + KFGI + + Sbjct: 155 IVIDSVQEIDRVAAAASRHGVVQPVRLRVNSGVHAHTHAFLATAHDDQKFGIALPDAAAA 214 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A + G+ HIGSQI + F ++ L + ++L G ++ +++GGG G Sbjct: 215 VARIREHGSLAFLGLHGHIGSQIFGADGFAESASRLLAVHREL-LAGGDVPELNLGGGFG 273 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKV---- 290 IAY + P ++ A I + + + EPGR ++ G+ + V Sbjct: 274 IAYTAADDPAPIAELAHRIAETVAASCTRLGIPLPVVAFEPGRSIIGRAGLTLYTVGTTK 333 Query: 291 ------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 ++A + +V +D M+D RP LY+A + I + + G Sbjct: 334 EVLAAAQDGGETAVRRYVSVDGGMSDNARPALYEADY-SARIAGRVSAAPPVLVRVAGKH 392 Query: 345 CETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 CE+GD + + PGDLL + TGAY + YN + V + +I Sbjct: 393 CESGDIVVHAEYLPADTAPGDLLAVPATGAYCWTLASNYNYLGRPAVVAVRDGEARVIVK 452 Query: 404 RMTFQELIELD 414 + ++L+ D Sbjct: 453 GESIEDLLARD 463 >gi|255534252|ref|YP_003094623.1| Diaminopimelate decarboxylase [Flavobacteriaceae bacterium 3519-10] gi|255340448|gb|ACU06561.1| Diaminopimelate decarboxylase [Flavobacteriaceae bacterium 3519-10] Length = 399 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 119/405 (29%), Positives = 191/405 (47%), Gaps = 19/405 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L K+A TP Y Y +I++ Y +++F T YA KA SN ++K + +LG Sbjct: 5 DLLKIAEQYGTPTYVYDAESIKEQYEKLTSSFHKS-TRFFYACKALSNINILKYVKNLGG 63 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 LD VS E++ L A A++I+F+ + EI+ A+ ++ + L Q Sbjct: 64 SLDCVSINEVKLGLKAGFEAKKILFTPNCVDLAEIEEAMALNVHINIDN----ISILEQF 119 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G PI R+NP I A + KISTG + KFGI IH + + G+ Sbjct: 120 GNKYGGSYPIFVRINPHIFAGGNYKISTGHIDSKFGISIH-QLRHIERVMKTTNLNVEGL 178 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MH GS+I + F + ++ +L + N++++D+G G + Y Sbjct: 179 HMHTGSEIKDPDVFLQGLDIMF----ELAEHFPNLKYLDMGSGFKVPYQEGDIETDVKTL 234 Query: 257 ASLIHQYFGNL------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + + + ++ EPG++LV+ G L+ K IK++ F ++ N Sbjct: 235 GKKVEKALSEFSKSSGKKFELWFEPGKYLVSKSGNLLVKTNVIKQTTATVFAGINSGFNH 294 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 +RP YD+YH+I+ + NP G +VG ICET D A +RK+ R GD+L Sbjct: 295 LIRPMFYDSYHKIDNLSNPKG--AQRIYTVVGNICET-DTFAWDRKLNETREGDVLVFRN 351 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAYG S +NSRL E++ H+IR R F++L++ Sbjct: 352 AGAYGFEMSSNFNSRLKPAEVLFLDGAAHLIRRRDEFEDLLKNQI 396 >gi|320006754|gb|ADW01604.1| diaminopimelate decarboxylase [Streptomyces flavogriseus ATCC 33331] Length = 449 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 113/420 (26%), Positives = 191/420 (45%), Gaps = 14/420 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L + LA TP Y +A+ ++ AF V YA KA Sbjct: 13 GHLEIGGCDVLDLAKAYGTPVYVIDESAVRDRCRSYLRAFRSKWPHVDVAYASKAFLVGE 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ A G LD+VS GELR AL A +I F G KT ++I+LA+ S + ++ Sbjct: 73 MVRLAAEEGLSLDVVSAGELRLALWAGASPSKITFHGNYKTGEDIELAVCSRVRSLVIDC 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ ++++A G+ + R+N I+ +T K +TG + KFG+P+ + + A A Sbjct: 133 LDEIDLIDRQAREHGRVQDVDIRLNLGIDIHTDPKYTTGDEASKFGLPVRRGDAASAVAR 192 Query: 187 TL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGGGLGIA 243 L +++ G+ H+G+Q+ + +A + + + + + Q I VGGG+G+ Sbjct: 193 VLTRDHLRLRGLHFHLGAQVLDTKYHRQALNEVGEFVRTVTARTPWKPQSITVGGGMGVN 252 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIIL-------EPGRFLVADVGILVTKVISIKKS 296 Y PP S++A + FG EPGR ++A+ G + V K+S Sbjct: 253 YDGVSSPPPPSEWARDLLSVFGEQVAPYCAPDVVFGVEPGRSVIAEAGSTLYTVGPTKRS 312 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA-GDRLHIHADIVGPICETGDFIALNR 355 D+ V +D ++D RP +Y + H + NP D A I G CET D + Sbjct: 313 GDRRLVAVDGGLSDNPRPLMYQSVHNVVLASNPELRDTELHEATIFGRHCET-DRLIDGV 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 ++ PG++L ++ TGAY +N P + V + ++ R F + I + Sbjct: 372 RLPDLPPGEVLAVQCTGAYTHSMFNQHNRFDKPPVVFVRDGRSRLVVRRERFSDTILTEI 431 >gi|326403276|ref|YP_004283357.1| diaminopimelate decarboxylase [Acidiphilium multivorum AIU301] gi|325050137|dbj|BAJ80475.1| diaminopimelate decarboxylase [Acidiphilium multivorum AIU301] Length = 438 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 154/419 (36%), Positives = 227/419 (54%), Gaps = 5/419 (1%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALK 60 +F +G L ++V L +A TP + YS IE AF G + YA+K Sbjct: 22 SFHAMDG-LCLDDVPLASIAAAHGTPTWVYSAATIEGRLAALRAAFAGEGLAPAIRYAVK 80 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN + A++ + G+G D+ S GE RA AA + +VFSGVGK DE+ AL +GI Sbjct: 81 ANDHLAILGLVRAGGAGADVTSAGEFARAEAAGIAPGAMVFSGVGKREDELRRALAAGIG 140 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 NVES EL+ ++ A ++G AP+A RVNPD+ A H KISTG+K DKFGI + Sbjct: 141 QLNVESAEELEMISGIAAAMGVAAPVALRVNPDVAAGGHDKISTGRKGDKFGIGFDDAGA 200 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 LY +A+ LPG++ G HIGSQI +F A++ + L LR G ++ +D+GGG Sbjct: 201 LYRHAAALPGIEAVGFSTHIGSQIFAPAAFEAAYRRVLGLIGALRGEGLAVRRLDLGGGF 260 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 GI Y P ++ A+++ + G ++I+EPGR+LV G+L+ +V +K++ + Sbjct: 261 GIPYDDGTAFPFAAQ-AAMVRRVLGGHDLELIVEPGRWLVGPAGVLLARVTLVKRAGAER 319 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV+LD MND +RP LY A H I + A++VGP+CE+ D + + Sbjct: 320 FVVLDAGMNDLIRPALYGARHGIVPVGAADAAGAPAPAEVVGPVCESSDRFGTH-DLPEL 378 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 PG L+ + GAYGA S TYN R ++M+ +IR R EL + +P Sbjct: 379 APGALVALLDAGAYGATMSSTYNGRPFAAQVMIADGAPQLIRRRQALDELWRDEIVPPR 437 >gi|329733442|gb|EGG69774.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus 21193] Length = 421 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 120/422 (28%), Positives = 197/422 (46%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 IQMVKLVAEEDLQLDVVSEGELYTALEAGFEPNRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I + A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 DKVQQSKHLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKEQG---IQVELLNLGGGFGI 240 Query: 243 AY-HSDHRPPSSSDYASLIHQYFGNLQCKII------LEPGRFLVADVGILVTKVISIKK 295 Y D P S + ++ I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEDDKSFPIESGIKDITDTIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|256372577|ref|YP_003110401.1| diaminopimelate decarboxylase [Acidimicrobium ferrooxidans DSM 10331] gi|256009161|gb|ACU54728.1| diaminopimelate decarboxylase [Acidimicrobium ferrooxidans DSM 10331] Length = 426 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 110/413 (26%), Positives = 176/413 (42%), Gaps = 17/413 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L + +S+ +LA TP + Y + + + V YA KA S A+ Sbjct: 23 GELTIQGISVHELADRFGTPLFVYDEDEVRARIDELRSGLGAL--QVTYASKAFSAVAMA 80 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + +A G D S GEL A VPAERIV G K +DE+ LA + G+ V++ Sbjct: 81 RIVADTGLWWDAASAGELEAARRGGVPAERIVLHGNNKGVDELLLADEVGVGRIVVDAHE 140 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 EL+ + + + + RV P I A+TH + TG+ + KFG+ + + A Sbjct: 141 ELERIAR---LGLGRRRLWLRVVPGIEAHTHAFVRTGQVDSKFGLQLDDGSAERALTWAR 197 Query: 189 PGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 + G+ HIGSQI ++ F + + + + + + +GGG+G+ Y D Sbjct: 198 AHGLTVVGIHAHIGSQIFDLDPFGELAGRMGAVREAWG-----VDEVSLGGGIGVPYVRD 252 Query: 248 HRPPSSSDYASLIHQYFG---NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI- 303 R P+ ++ I + + +EPGR LVA I + +V +K+ + Sbjct: 253 ERAPTLEEWGRSIAEATTLAGMDPERTFVEPGRALVAPAAITLYRVGVVKRIPGVRTYVA 312 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRP 362 +D M+D RP LY + +E +VG CE+GD + N + Sbjct: 313 VDGGMSDNPRPVLYGSGYEAVAAGRLEA-PHTTAMRVVGKHCESGDVLVANALLPEDLAA 371 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 G+L+ TGAYG YN +MV I R +L L+ Sbjct: 372 GELIVTPVTGAYGYSMGSNYNRLPRPSVVMVRDGVAREIVRREQLDDLFRLEV 424 >gi|145525334|ref|XP_001448489.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124416033|emb|CAK81092.1| unnamed protein product [Paramecium tetraurelia] Length = 408 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 120/418 (28%), Positives = 190/418 (45%), Gaps = 21/418 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSN 64 + + +N++ + L +P Y Y I++ T + A V YA KAN+N Sbjct: 2 DSNFTIQNLTPKSLVQEFGSPLYVYDEEIIKRQCQTITTALKNSFDQGAKVLYACKANTN 61 Query: 65 QAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 V+K + G G+D VS E+ AL A +I F+ T +EID A+Q G+ Sbjct: 62 PNVLKIMKSNGVHGIDAVSPNEVEVALQAGFLNNQITFTANYMTKEEIDYAIQKGVILNV 121 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 E ++ K + KA + R+N D+ H ++TG + KFGI + L Sbjct: 122 GEIDTLKKLIA-------HKAEVIIRLNLDVGIGHHNHVNTGGNDSKFGINLMWKEQLSE 174 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKL-LRDLTQQLRSNGHNIQHIDVGGGLGI 242 GVKI G+ H+GS+I + + + +++ID+GGG G+ Sbjct: 175 I--QKQGVKIIGLHQHMGSKIMKKDHDSYLLGIEKLFQAATQELELPYLKYIDIGGGFGV 232 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQ----CKIILEPGRFLVADVGILVTKVISIKKSAD 298 Y + S I + + + +EPGR+L+A+ G L+ V +I + Sbjct: 233 KYQDYEETSDLNLLFSEIKKLYDKYFINVKPMLFIEPGRYLIAESGYLLCTVQAINTNKS 292 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 +TFV D M+ +RP LY++YHEI + + G ICE+GD + ++R + Sbjct: 293 RTFVGTDSGMHHLIRPALYESYHEIINSEEKQVESRL--VTVCGNICESGDLLGVDRNL- 349 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 D+L I+ GAYG S YN R EI+V S+ +IIR R T L+ I Sbjct: 350 KVEVNDVLVIQNGGAYGFSMSSNYNLRERPAEILVRDSKPYIIRKRETLDYLLANVVI 407 >gi|293366637|ref|ZP_06613314.1| diaminopimelate decarboxylase [Staphylococcus epidermidis M23864:W2(grey)] gi|291319406|gb|EFE59775.1| diaminopimelate decarboxylase [Staphylococcus epidermidis M23864:W2(grey)] gi|329736965|gb|EGG73222.1| diaminopimelate decarboxylase [Staphylococcus epidermidis VCU045] Length = 421 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 118/421 (28%), Positives = 186/421 (44%), Gaps = 21/421 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 G L SL+ +A TP Y I + AF+ + YA KA + Sbjct: 8 NGELTMGGTSLKTIAQSFGTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCI 67 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 ++K + LD+VSEGEL AL A ++RI F G KT EI AL + I F V+ Sbjct: 68 QMVKLIDEENLQLDVVSEGELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVD 127 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + E++ +++ A S + RVNP + A+TH+ I TG+++ KFG+ I +L A Sbjct: 128 TLEEIELIDKYADSNV---DVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVN 184 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +++ G+ HIGSQI+ E K K++ + R + +++GGG GI Sbjct: 185 KVKATKHLQLKGIHFHIGSQIEGTEPMIKTAKIVLNWLASER---IEVSLLNIGGGFGIK 241 Query: 244 YHSDHRPPSSSD-------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y Q +I +EPGR +V + GI + +V +IK Sbjct: 242 YVEGDESFPIEQGISEITEAIKETAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDI 301 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M+D +R LY A +E + ++ + I G +CE+GD I + Sbjct: 302 PGVNKYVSVDGGMSDHIRTALYGAQYEALLVNR--NEKANESVTIAGKLCESGDIIVRDA 359 Query: 356 KIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD L I TGAY + YN P + + + R + ++LI D Sbjct: 360 PLPSSVHRGDYLAILSTGAYHYSMASNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIND 419 Query: 415 S 415 + Sbjct: 420 T 420 >gi|82750991|ref|YP_416732.1| diaminopimelate decarboxylase [Staphylococcus aureus RF122] gi|82656522|emb|CAI80944.1| diaminopimelate decarboxylase [Staphylococcus aureus RF122] Length = 421 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 120/422 (28%), Positives = 198/422 (46%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELAMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL RAL A RI F G KT EI AL++ I F + Sbjct: 67 IQMVKLVAEEDLQLDVVSEGELYRALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA- 183 +S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I + A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAI 183 Query: 184 -YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 NNVQQSKYLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKEQG---IQVELLNLGGGFGI 240 Query: 243 AYHSDHRPPSS-------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y +D ++ G +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKFLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|213964601|ref|ZP_03392801.1| diaminopimelate decarboxylase [Corynebacterium amycolatum SK46] gi|213952794|gb|EEB64176.1| diaminopimelate decarboxylase [Corynebacterium amycolatum SK46] Length = 472 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 121/427 (28%), Positives = 194/427 (45%), Gaps = 22/427 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 GS+ VSL +A TP + + + AF G + V YA KA ++ + Sbjct: 44 GSVEIGGVSLVDIAKEFGTPVFVVDEQDFRSRCRSMAKAFRGAE-NVHYASKAFLSKTIA 102 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G LD+ S E+ ALAA PA+ + F G K+ E+ A+ +G+ ++S S Sbjct: 103 RWVMEEGLHLDVASGNEMAIALAAGFPAKDMTFHGNNKSTAELRDAISAGVGKIVLDSRS 162 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY--AS 186 EL+ L+Q A G + RV P + A+TH+ I+T ++ KFG + +L A Sbjct: 163 ELRRLSQVAAEAGVVQDVLVRVKPGVEAHTHEFIATAHEDQKFGFSLASGSALEASSLVE 222 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-----HNIQHIDVGGGLG 241 +++ G+ HIGSQI + F A + + L ++L + +D+GGG G Sbjct: 223 EDENLRLVGLHCHIGSQIVDSDGFILAAERVFSLVEKLVERHGTEISEHFNTLDLGGGFG 282 Query: 242 IAYHSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 IAY + +P + A I Q G + +EPGR +V + V +V Sbjct: 283 IAYTAGEQPLDVAPLADEILTAVDKLAQRIGIAAPTVAVEPGRAIVGPSMVTVYEVGTLK 342 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 ++I + +V +D M+D +RP LY + ++ VN I +VG CE+GD Sbjct: 343 DVTIDDGMTRRYVSVDGGMSDNIRPALYGSNYDGRV-VNREVSGSRIPTRVVGKHCESGD 401 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + GDL + TGAY + YN P + V Q I R T Q Sbjct: 402 ILINDANYPSDIVEGDLFALAATGAYCYAMASRYNMLTRPPVVSVCDGQVTQILRRETVQ 461 Query: 409 ELIELDS 415 +L+ L+ Sbjct: 462 DLLSLEC 468 >gi|239617262|ref|YP_002940584.1| diaminopimelate decarboxylase [Kosmotoga olearia TBF 19.5.1] gi|239506093|gb|ACR79580.1| diaminopimelate decarboxylase [Kosmotoga olearia TBF 19.5.1] Length = 395 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 131/414 (31%), Positives = 207/414 (50%), Gaps = 26/414 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L+K+A V TP Y Y I+ F+G++ +A+KAN+N ++K + + G G Sbjct: 5 LKKIAKVYGTPVYVYFEKEIKNRIDNVLGVFEGINVFPTFAVKANNNPHLLKVIYNKGFG 64 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D+++ GEL A A E++V++G GKT +I + + + Sbjct: 65 MDVITPGELYAAKLAGASPEKLVWNGNGKTETDIKKFIG-----SVKYVNVDSFEEMEIW 119 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP+I+A TH ISTG K+ KFGIP+ ++ + P +I G+ Sbjct: 120 KKKEANVELFIRVNPNIDARTHPHISTGLKKHKFGIPLDKLD---EFLKKFPDNRIKGLH 176 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +HIGSQI + F +AF+ + +++++ ++GGG GI Y Sbjct: 177 VHIGSQITTVAPFVEAFEKVSEVSKKYGFEKI-----NIGGGWGINYDGKELDLLEYR-- 229 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 ++I E GR+++ GIL+ KV+++KK+ DK FV++D MN +RP LY Sbjct: 230 -KKVVPLLKNFKEVICEIGRYIIGPSGILLLKVLNLKKTDDKYFVVVDGGMNTLIRPALY 288 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 A+H I + A DIVGP+CE+GD +A + +I LP LLY+E GAYG Sbjct: 289 GAHHGIKILEPTALSG---KIDIVGPLCESGDKLAWDIEIELPEVSSLLYVENAGAYGFS 345 Query: 378 QSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIELDSIPAWLQKTPKQSSEN 430 S YNS L E++V + +IR R T +L +Q+T + EN Sbjct: 346 MSNNYNSTLRPAEVLVKENGEIVLIRRRETLNDLFGT------VQRTEIREPEN 393 >gi|70726512|ref|YP_253426.1| diaminopimelate decarboxylase [Staphylococcus haemolyticus JCSC1435] gi|68447236|dbj|BAE04820.1| diaminopimelate decarboxylase [Staphylococcus haemolyticus JCSC1435] Length = 421 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 118/425 (27%), Positives = 194/425 (45%), Gaps = 22/425 (5%) Query: 5 KYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKA 61 KY + G L SL+ LA TP Y I + +AF G+ + YA KA Sbjct: 4 KYNDYGELTMAGTSLKTLAQSFGTPTIVYDEDEIRNQMRRYHSAFQKSGLKYNISYASKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + ++K + LD+VSEGEL AL A +I F G KT EI AL+SG+ Sbjct: 64 FTCIQMVKLVQEEDLQLDVVSEGELYTALEAKFDPSKIHFHGNNKTKREIQYALESGVGY 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F ++S E+ +++ A + RVNP + A+TH+ I TG+++ KFG+ I ++ Sbjct: 124 FVIDSLEEIDLIDRYA---SDTVNVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIRHGLAI 180 Query: 182 YA--YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A + + G+ HIGSQI+ E+ + K++ + + ++ +++GGG Sbjct: 181 EAVNKVRDSKRLHLKGIHFHIGSQIEGTEAMIETAKIVLNWLSEN---DIKVELLNLGGG 237 Query: 240 LGIAYHSDHRPPSS-------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y +D + +I +EPGR +V + GI + +V + Sbjct: 238 FGIKYVEGDVSFPIEEGIAEITDAIKAETERLNYEVPEIGIEPGRSIVGEAGITLYEVGT 297 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK+ + +D M+D +R LY A ++ + + I G +CE+GD I Sbjct: 298 IKEIPEVNKYVSIDGGMSDHIRTALYGAKYQALLVNRH--EEADETVTIAGKLCESGDII 355 Query: 352 ALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + K+ + GD L I TGAY + YN P + + + R + ++L Sbjct: 356 IRDAKLPSSVQRGDYLAILSTGAYHYSMASNYNQMQKPPVFFLKDGKAREVIKRQSLRQL 415 Query: 411 IELDS 415 I D+ Sbjct: 416 IINDT 420 >gi|297207945|ref|ZP_06924377.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|296887413|gb|EFH26314.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ATCC 51811] Length = 421 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 192/422 (45%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 IQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ +++ A + RVNP + A+TH I TG+++ KFG+ I + A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHVFIQTGQEDSKFGLSIQYGLAKKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 DKVQQSKHLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKEQG---IQVELLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y I +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|296104501|ref|YP_003614647.1| diaminopimelate decarboxylase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058960|gb|ADF63698.1| diaminopimelate decarboxylase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 420 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 121/425 (28%), Positives = 196/425 (46%), Gaps = 29/425 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L+A+N L +L P + Y + + FD +V +A KA SN + Sbjct: 9 DTDLNADN--LLRLPAEFGCPVWVYDAQIVREKIAALHQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + ++ + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGFDP-KTDPDAIVFTADLIDDATLARVHELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + ++ + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLEQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYADMPAALEVLQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 +K+ G+ MHIGS + + ++ + +Q+ G +++ I GGGL I Y Sbjct: 181 Y-NLKLVGIHMHIGSGV----DYGHLEQVCGAMVRQVIDFGQDLEAISAGGGLSIPYREG 235 Query: 248 HRPPSSSDY------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + Y A K+ +EPGRFLVA+ G+LV +V S+K+ + F Sbjct: 236 EEAIDTDHYYGLWSAARDKVAAHVGHPVKLEIEPGRFLVAESGVLVAQVRSVKEMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP++Y +YH I D I + GP+CE+GD + Sbjct: 296 VLIDAGFNDLMRPSMYGSYHHISALAADGRDLTDAPRIDTVVAGPLCESGDVFTQHEGGK 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 R + +PGD L + TGAYGA S YNSR L+PE++ + + +IR R T QEL+ Sbjct: 356 VETRALPEVKPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGKARLIRRRQTIQELL 415 Query: 412 ELDSI 416 L+ + Sbjct: 416 ALELV 420 >gi|307299389|ref|ZP_07579190.1| diaminopimelate decarboxylase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915185|gb|EFN45571.1| diaminopimelate decarboxylase [Thermotogales bacterium mesG1.Ag.4.2] Length = 375 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 138/398 (34%), Positives = 206/398 (51%), Gaps = 27/398 (6%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + +KLA+ TP Y Y I K F+G+D + +ALKAN+N A++K +A Sbjct: 2 IDFQKLANEFGTPLYVYDAEKIRKRIKKAKTVFEGLDAEIVFALKANNNPALLKIMAEEE 61 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G D+VS GEL + A + RI+++G GKT ++I + G+ ++S EL + Sbjct: 62 IGADVVSRGELLASKMAGMK--RILWNGNGKTHEDITHFVNQGLNIVCIDSLQELPLWD- 118 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 G RVNPD++A TH ISTG + KFG+PI ++ + +I G Sbjct: 119 -----GVNVIKLLRVNPDVDARTHPHISTGLRAHKFGVPIEKVSEVAD--------RIDG 165 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + +HIGSQI +E F A+ D +Q ++ID+GGG GI Y Sbjct: 166 IHLHIGSQITDVEPFFDAYSKALDCAKQYG-----FKYIDLGGGWGIDYEGKE--LDIER 218 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 I F K+I E GRF++ G LVTKV+S+K S F++ D MN +RP Sbjct: 219 LQKGISGIFAGFDGKLIAELGRFIIGPAGYLVTKVVSVKPSEKI-FIVTDAGMNALIRPV 277 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LYDA+H I + + + AD+VGP+CE+GD +A RK+ +P PG + +E GAYG Sbjct: 278 LYDAHHRIQVLA---STKKTVTADVVGPLCESGDILARGRKLEVPIPGTAIVLENAGAYG 334 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + YN E++V+G + +IR R + +EL Sbjct: 335 FSMANNYNGMPFPAEVLVDGEEVKLIRRRQSIEELFTN 372 >gi|159464022|ref|XP_001690241.1| diaminopimelate decarboxylase [Chlamydomonas reinhardtii] gi|158284229|gb|EDP09979.1| diaminopimelate decarboxylase [Chlamydomonas reinhardtii] Length = 473 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 128/408 (31%), Positives = 209/408 (51%), Gaps = 5/408 (1%) Query: 7 FEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 +G L+ + + +E + + V +PFY YS I NY + A G+D + CYA+KAN+N Sbjct: 64 EDGYLYCDQMRVEDIRNKVPESPFYLYSWNRIAHNYAEYKKALAGLDNLPCYAVKANNNL 123 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 ++K LA G+G +VS EL+ A+ A +R + +G GK E++LA + G+ Sbjct: 124 VIMKQLAAAGAGAVLVSGNELKLAMKAGFDPKRTILNGNGKLPWELELAAEMGVNINIDS 183 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 +L+ + A GKK + R+NPD++ H +STG KFGI I Sbjct: 184 EF-DLENIAAAARKTGKKVSVLLRINPDVDPQVHSYVSTGLASSKFGIRNSHIKWFLDEI 242 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY- 244 P +++ GV H+GS I ++ F A ++ D + +R+ G ++++++GGGLGI Y Sbjct: 243 RKEPLLELVGVHSHLGSTITKVNIFRDAAVIMCDFVKMIRAEGFQLKYLNIGGGLGIDYS 302 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 H P+ +D + L +++EPGR +VA LV V +K + +K F+++ Sbjct: 303 HQGQVLPTPTDLIDTVRDIVKELGLTLVIEPGRSMVATGSALVNTVTGVKTNGNKNFIVI 362 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D +M +RP+LY AY I D+VGPICE+GD++ +R++A P GD Sbjct: 363 DGSMATLIRPSLYGAYQHIELTKPH--STPVQTFDVVGPICESGDYLGKDRELATPSKGD 420 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 + + GAY + YN ++ E MV IR T + + Sbjct: 421 GIVVHDAGAYCMSMASNYNLKMKPAEYMVENGGLRKIRHEETLDQHLA 468 >gi|269140254|ref|YP_003296955.1| diaminopimelate decarboxylase [Edwardsiella tarda EIB202] gi|267985915|gb|ACY85744.1| diaminopimelate decarboxylase [Edwardsiella tarda EIB202] gi|304560084|gb|ADM42748.1| Diaminopimelate decarboxylase [Edwardsiella tarda FL6-60] Length = 428 Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 111/414 (26%), Positives = 170/414 (41%), Gaps = 26/414 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L L TP + Y IE+ + AFD + +A KA SN +++ + G Sbjct: 26 LAALPGRFGTPLWVYDAALIERQIASLR-AFD----TIRFAQKACSNLHILRLMRQAGVK 80 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ RAL A V + A I + + + ++ Sbjct: 81 VDAVSLGEIERALVAGFRPGGDDEEIVFTADVIDE-ATLDRICALGITVNAGSCDMLRQL 139 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 P+ R+NP +K +TG + K GI + A T + Sbjct: 140 GRRASGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWHQDLAQALALIDTYGLRLV---- 195 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY- 256 + I + ++ L Q + G +IQ I GGGL I Y Y Sbjct: 196 -GLHMHIGSGVDYDHLARVCDTLANQAIALGRDIQAISAGGGLSIPYRDGDAAVDVRHYY 254 Query: 257 -----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 A ++ +EPGR+LVA G+L+ +V ++K + FV+ D ND Sbjct: 255 GLWDAARRRIAAHLGHPVRLEIEPGRYLVAQAGVLLAQVRAVKSMGQRHFVLADAGFNDL 314 Query: 312 MRPTLYDAYHEINYIVNPAGD--RLHIHADIVGPICETGDFIALN-------RKIALPRP 362 MRP +Y ++H I+ + D I + GP+CE+GD + + Sbjct: 315 MRPAMYGSHHHISLLPQDGRDVATPCIETVVGGPLCESGDVFTQREGGKVTSCALPAAQV 374 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L TGAYGA S YNSR L+PE++V G++ +IR R EL+ L+ I Sbjct: 375 GDWLVFHDTGAYGASMSSNYNSRPLLPEVLVEGNKARLIRRRQRMDELLALEQI 428 >gi|282910980|ref|ZP_06318782.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus WBG10049] gi|282324675|gb|EFB54985.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus WBG10049] gi|312438200|gb|ADQ77271.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH60] Length = 421 Score = 228 bits (582), Expect = 9e-58, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 194/422 (45%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKMIAQSFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 LQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I ++ A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 NKVQQSKYLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKE---QDIQVELLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y I +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|298694694|gb|ADI97916.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ED133] Length = 421 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 119/422 (28%), Positives = 194/422 (45%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LDIVSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 IQMVKLVAEEDLQLDIVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I + A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 DKVQQSKYLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKE---QDIQVELLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y I +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + ++ I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEKADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|7573355|emb|CAB87661.1| diaminopimelate decarboxylase-like protein [Arabidopsis thaliana] Length = 496 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 128/417 (30%), Positives = 218/417 (52%), Gaps = 12/417 (2%) Query: 8 EGSLHAENVSLEKLAHVV-QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L+ E ++ + V + PFY YS I +N + A +G+ +++ YA+KAN+N Sbjct: 77 DGFLYCEGTKVQDIMETVEKRPFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLK 136 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVP-------AERIVFSGVGKTIDEIDLALQSGI 119 +++ L LG G +VS ELR AL A R +F+G GK+++++ LA Q G+ Sbjct: 137 ILEHLRSLGCGAVLVSGNELRLALLAVFDHVFGVDEMNRCIFNGNGKSLEDLVLAAQEGV 196 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 + NV+SE +L + + + GK+ + R+NPD++ H ++TG K KFGI ++ Sbjct: 197 F-VNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQ 255 Query: 180 SLYAYASTLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 P K+ G H+GS I +++ F A L+ + ++R G + ++++GG Sbjct: 256 WFLDEVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGG 315 Query: 239 GLGI-AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GLGI YH+ P+ D + + + + +I+EPGR L+A+ V V +K + Sbjct: 316 GLGIDYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVKTNG 375 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 K F+++D +M + +RP+LYDAY I + + D+VGP+CE+ DF+ +R++ Sbjct: 376 TKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPPEAEVTKFDVVGPVCESADFLGKDREL 435 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 P G L + GAY + TYN ++ PE V IR TF + + Sbjct: 436 PTPPQGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSITKIRHAETFDDHLRF 492 >gi|27467998|ref|NP_764635.1| diaminopimelate decarboxylase [Staphylococcus epidermidis ATCC 12228] gi|27315543|gb|AAO04677.1|AE016747_174 diaminopimelate decarboxylase [Staphylococcus epidermidis ATCC 12228] Length = 421 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 118/421 (28%), Positives = 187/421 (44%), Gaps = 21/421 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 G L SL+ +A TP Y I + AF+ + YA KA + Sbjct: 8 NGELTMGGTSLKTIAQSFGTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCI 67 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 ++K + LD+VSEGEL AL A ++RI F G KT EI AL + I F V+ Sbjct: 68 QMVKLIDEENLQLDVVSEGELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVD 127 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + E++ +++ A S + RVNP + A+TH+ I TG+++ KFG+ I +L A Sbjct: 128 TLEEIELIDKYADSNV---DVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVN 184 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +++ G+ HIGSQI+ E+ K K++ + R + +++GGG GI Sbjct: 185 KVKATKHLQLKGIHFHIGSQIEGTEAMIKTAKIVLNWLASER---IEVSLLNIGGGFGIK 241 Query: 244 YHSDHRPPSSSD-------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y Q +I +EPGR +V + GI + +V +IK Sbjct: 242 YVEGDESFPIEQGISEITEAIKETAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDI 301 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M+D +R LY A +E + ++ + I G +CE+GD I + Sbjct: 302 PGVNKYVSVDGGMSDHIRTALYGAQYEALLVNR--NEKANESVTIAGKLCESGDIIVRDA 359 Query: 356 KIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD L I TGAY + YN P + + + R + ++LI D Sbjct: 360 PLPSSVHRGDYLAILSTGAYHYSMASNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIND 419 Query: 415 S 415 + Sbjct: 420 T 420 >gi|226322592|ref|ZP_03798110.1| hypothetical protein COPCOM_00364 [Coprococcus comes ATCC 27758] gi|225208929|gb|EEG91283.1| hypothetical protein COPCOM_00364 [Coprococcus comes ATCC 27758] Length = 436 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 100/441 (22%), Positives = 160/441 (36%), Gaps = 20/441 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYAL 59 M+ K L+++ TPF+ Y I +N AF +A+ Sbjct: 1 MNRMK---KEPFVTKTQLDEIVKEYPTPFHLYDEKGIRENVKALKEAFAWNKGYKEYFAV 57 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA N ++ L G G D S EL + + E I+FS +E LA + G Sbjct: 58 KATPNPYILNILKEYGCGCDCSSYTELLMSESVGQVGENIMFSSNDTPAEEFALADKLGA 117 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 + I+ R NP I + K+G+ QI Sbjct: 118 IINLDDITHIDFLEK---TIGKIPETISCRYNPGGLFKISNSIMDNPGDAKYGMTTEQIF 174 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + + + + + A L + + G +I+ I++ GG Sbjct: 175 EAFKILKSKGAKEFGIHAFLASNTVTNEYYPTLARTLFEVAVKLQKETGVHIKFINLSGG 234 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVIS 292 +GI Y D P + + + I E GRF++ G LVTK I Sbjct: 235 VGIPYKPDQEPNDIKVIGEGVRKVYEEVLVPAGMGDVAIYTELGRFMLGPYGCLVTKAIH 294 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K + + + A N RP +Y AYH I + + D+ G +CE D A Sbjct: 295 EKHTHKEYIGVDACAANLM-RPAMYGAYHHITVMGK-ENEPCDHTYDVTGSLCENNDKFA 352 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELI 411 ++R++ GDLL I TGA+G YN RL E+++ +IR T + Sbjct: 353 IDRQLPKIDMGDLLVIHDTGAHGFSMGYNYNGRLRSAEVLLKEDGGTQLIRRAETPMDYF 412 Query: 412 E-LDSIP--AWLQKTPKQSSE 429 D P L+K +++ + Sbjct: 413 ATFDCFPVYEELKKNTEEADK 433 >gi|156932679|ref|YP_001436595.1| diaminopimelate decarboxylase [Cronobacter sakazakii ATCC BAA-894] gi|156530933|gb|ABU75759.1| hypothetical protein ESA_00463 [Cronobacter sakazakii ATCC BAA-894] Length = 420 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 116/412 (28%), Positives = 185/412 (44%), Gaps = 27/412 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L P + Y I FD ++ +A KA SN +++ + G +D Sbjct: 20 LPAQYGGPVWVYDAQIIRAQIDRLRQ-FD----VIRFAQKACSNIHILRLMREAGVKVDS 74 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RA+AA R + T D +D A + ++ V + + + ++ Sbjct: 75 VSLGEIERAIAAGYDP-RQNPDDIVFTADVLDDATIARVHELGVPVNAGSVDMLAQLGAV 133 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + R+NP +K +TG + K GI + + A +K+ G+ MHI Sbjct: 134 SPGHRVWLRINPGFGHGHSQKTNTGGENSKHGIWYSDLPTALA-VMQRYQLKLVGMHMHI 192 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 GS + + ++ + Q+ G +++ I GGGL I Y + Y L Sbjct: 193 GSGV----DYGHLERVCGAMVSQVIEFGQDLEAISAGGGLSIPYREGDETIDTDHYFGLW 248 Query: 261 HQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 ++ K+ +EPGRFLVA+ G+LV +V S+K+ + FV++D ND MRP Sbjct: 249 NRAREQIAAHFGHPIKLEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRP 308 Query: 315 TLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGD 364 ++Y +YH I D + + GP+CE+GD R + RPGD Sbjct: 309 SMYGSYHHISALAADGRDLRDAPLMETVVAGPLCESGDVFTQQEGGKVETRALPAVRPGD 368 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 L + TGAYGA S YNSR L+PE+++ + IR R T EL+ L+ Sbjct: 369 YLVLHDTGAYGASMSSNYNSRPLLPEVLLENGEARTIRRRQTIDELLALERF 420 >gi|241766269|ref|ZP_04764164.1| diaminopimelate decarboxylase [Acidovorax delafieldii 2AN] gi|241363637|gb|EER59039.1| diaminopimelate decarboxylase [Acidovorax delafieldii 2AN] Length = 417 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 112/401 (27%), Positives = 182/401 (45%), Gaps = 22/401 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A TP + Y + + SN F+ + +A KA SN +++ + G +D V Sbjct: 14 ADQFGTPLWVYDAATVRQRIAQLSN-FE----TIRFAQKACSNIHILRLMREQGVKVDAV 68 Query: 82 SEGELRRALAAPVPAERIV--FSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S GE+ RALAA A + + T D D A + + V + + + + Sbjct: 69 SRGEILRALAAGYQAGTPGEGPAEIVFTADLFDAATLACVVEHGVPVNAGSIDMLHQLGA 128 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + R+NP K +TG + K GI + + A A G+K++G+ MH Sbjct: 129 ASPGHAVWLRINPGFGHGHSNKTNTGGEHSKHGIWHTDLPAALA-AIRQHGLKLAGLHMH 187 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY--- 256 IGS + + + +L + + GH++Q I GGGL I Y + Y Sbjct: 188 IGSGV-DYRHLEQVCGAMVELVRATHAAGHDLQAISAGGGLSIPYRDGDPVIDTQHYHGL 246 Query: 257 ---ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 A + + +EPGR+LVA+ G+L+ +V + K + + F++LD N+ MR Sbjct: 247 WDAARQQAEAIVRHPLGLEIEPGRYLVAESGVLLGEVRATKNAGNNHFMLLDTGFNELMR 306 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGDLL 366 P++Y +YH ++ + + + GP+CE+GD R + R GDLL Sbjct: 307 PSMYGSYHTMSVLRRDGSTAAERPSVVAGPLCESGDVFTQGDGGVVLPRNLPDARVGDLL 366 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 I GAYGA S YN+R L+ E++ +G Q +IR R T Sbjct: 367 VIHDAGAYGASMSSNYNTRPLVAEVLFDGGQARLIRRRQTV 407 >gi|238921148|ref|YP_002934663.1| diaminopimelate decarboxylase [Edwardsiella ictaluri 93-146] gi|238870717|gb|ACR70428.1| diaminopimelate decarboxylase, putative [Edwardsiella ictaluri 93-146] Length = 419 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 110/414 (26%), Positives = 168/414 (40%), Gaps = 26/414 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L L TP + Y IE+ + FD + +A KA SN +++ + G Sbjct: 17 LSALPGRFGTPLWVYDAALIERQIASLRT-FD----TIRFAQKACSNLHILRLMRQAGVK 71 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ RAL A + V + A I + + + ++ Sbjct: 72 VDAVSLGEIERALMAGFRPDADDEEIVFTADVIDE-ATLDRICALGITVNAGSCDMLRQL 130 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 P+ R+NP +K +TG + K GI + A T + Sbjct: 131 GCRASGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYQDLAQALALIDTYGLRLV---- 186 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY- 256 + I + ++ L Q + G +IQ I GGGL I Y Y Sbjct: 187 -GLHMHIGSGVDYDHLARVCDTLANQAIALGRDIQAISAGGGLSIPYRDGDASVDVRHYY 245 Query: 257 -----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 A ++ +EPGR+LVA G+L+ +V ++K + FV+ D ND Sbjct: 246 GLWDAARRRIAEHLGHPVRLEIEPGRYLVAQSGVLLAQVRAVKSMGARHFVLADAGFNDL 305 Query: 312 MRPTLYDAYHEINYIVNPAGD--RLHIHADIVGPICETGDFIALN-------RKIALPRP 362 MRP +Y ++H I+ + D I + GP+CE+GD + + Sbjct: 306 MRPAMYGSHHHISLLPQDGRDVTTPCIETVVGGPLCESGDVFTQREGGRVTSCALPAVQV 365 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L TGAYGA S YNSR L+PE++V G +IR R EL+ L+ I Sbjct: 366 GDWLVFHDTGAYGASMSSNYNSRPLLPEVLVEGDSVRLIRRRQRMDELLALEQI 419 >gi|269203022|ref|YP_003282291.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ED98] gi|262075312|gb|ACY11285.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ED98] Length = 421 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 193/422 (45%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 IQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I + A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 DKVQQSKHLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKEQG---IQVELLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y I +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPYVFFLKDGKAREVIKRQSLRQLIIN 418 Query: 414 DS 415 D+ Sbjct: 419 DT 420 >gi|145295320|ref|YP_001138141.1| hypothetical protein cgR_1260 [Corynebacterium glutamicum R] gi|140845240|dbj|BAF54239.1| hypothetical protein [Corynebacterium glutamicum R] Length = 445 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 112/424 (26%), Positives = 187/424 (44%), Gaps = 18/424 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + V L LA TP + + AF G V YA KA + Sbjct: 23 EDGVVTVAGVPLPDLAEEYGTPLFVVDEDDFRSRCRDMATAFGGPG-NVHYASKAFLTKT 81 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G LDI S EL ALAA PA RI G K +D + +Q+G+ ++S Sbjct: 82 IARWVDEEGLALDIASINELGIALAAGFPASRITAHGNNKGVDFLRALVQNGVGHVVLDS 141 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAY 184 EL+ L+ A GK + RV P I A+TH+ I+T ++ KFG + Sbjct: 142 AQELELLDYVAAGEGKIQDVLIRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAFEAAKA 201 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIA 243 A+ + + G+ H+GSQ+ E F A + + L Q G + +D+GGG GIA Sbjct: 202 ANNAENLNLVGLHCHVGSQVFDAEGFKLAAERVLGLYSQIHSELGVALPELDLGGGYGIA 261 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKV-----I 291 Y + P + ++ AS + G + +++EPGR + + + +V + Sbjct: 262 YTAVEEPLNVAEVASDLLTAVGKMAAELGIDAPTVLVEPGRAIAGPSTVTIYEVGTTKDV 321 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 + + ++ +D M+D +RP LY + ++ + A + ++ IVG CE+GD + Sbjct: 322 HVDDDKTRRYIAVDGGMSDNIRPALYGSEYDARVVSRFA-EGEPVNTRIVGSHCESGDIL 380 Query: 352 ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + GD L + TGAY S YN+ + V ++ R T ++ Sbjct: 381 INDEIYPSDITSGDFLALAATGAYCYAMSSRYNAFTRPAVVSVRAGSSRLMLRRETLDDI 440 Query: 411 IELD 414 + L+ Sbjct: 441 LSLE 444 >gi|220913102|ref|YP_002488411.1| diaminopimelate decarboxylase [Arthrobacter chlorophenolicus A6] gi|219859980|gb|ACL40322.1| diaminopimelate decarboxylase [Arthrobacter chlorophenolicus A6] Length = 490 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 114/450 (25%), Positives = 185/450 (41%), Gaps = 44/450 (9%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------DTMVCYALKA 61 +G L + + +L TP + S FS+AF+ V YA K+ Sbjct: 39 DGELAIGGIPVSELQRQYGTPLFVMSENDFRARARAFSDAFNDAFADICGGVDVYYAGKS 98 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 AV++ + G LD S GEL A A +P + G K+ EI AL G+ Sbjct: 99 FLCTAVVRWVEEEGLRLDTASGGELAVAYRAGIPGADVALHGNNKSDGEIHRALDMGLGR 158 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP------- 174 V+S EL + A G++A + R+ P ++A+TH+ I+T ++ KFG+ Sbjct: 159 IVVDSLDELARVGAIAQGRGEQAKVMLRLTPGVHAHTHEFIATAHEDQKFGLSMAADTTD 218 Query: 175 ---IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHN 230 I A A+ PG+++ G+ HIGSQI + + F A + L Sbjct: 219 EAGISASEEAVAAATAHPGIELLGLHCHIGSQIFEPDGFALAAEKLLRFLAAMQEKYSIT 278 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADV 283 + +D+GGG GIAY + P +++ A+ + + +I +EPGR +V Sbjct: 279 LPELDLGGGYGIAYTPEDTPRPAAEIANAMAAVVRSTCAELGIDAPRISIEPGRAIVGST 338 Query: 284 GILVTKV------------------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + +V + + +V +D M+D RP LYDA + Sbjct: 339 TFTLYEVGTLKTVRVDAPGTSGDGDAGDNVTYPRRYVSVDGGMSDNARPVLYDADYSAVL 398 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNS 384 + + +VG CE+GD + + + GDLL + TGAY S YN Sbjct: 399 ASRTSNAAPQ-LSRVVGKHCESGDIVVRDVYLPEDVAAGDLLAVPGTGAYCWALSSNYNY 457 Query: 385 RLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + V +I T ++L+ D Sbjct: 458 LARPGVVAVRDGSSRLIVRGETEEDLLNRD 487 >gi|70729686|ref|YP_259425.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf-5] gi|68343985|gb|AAY91591.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf-5] Length = 410 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 115/411 (27%), Positives = 179/411 (43%), Gaps = 27/411 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L A TP +CY I+ AFD +V YA KA+SN +++ + G Sbjct: 10 LVAAARQYGTPLWCYDAATIQARIAQLQ-AFD----VVRYAQKASSNLHLLRLIREAGVR 64 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ RAL A V +G+ T D D A + + VE + + ++ Sbjct: 65 VDAVSLGEIERALLAGFSP---VDAGIVFTCDLFDEATLARVVELQVEVNAGSIDMLRQL 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP +K +TG + K GI Q+ A Sbjct: 122 GEKSPGHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHDQMSEALAVIRQHG-----LHL 176 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + I + ++ + ++S H+++ +GGGL Y P YA Sbjct: 177 VGLHMHIGSGVDYDHLEQVGAAMVAAVKSLDHDLEAFSIGGGLSTPYREGDTPVDVQRYA 236 Query: 258 SLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + ++ +EPGRFLVA+ G LV++V +K + FV++D ND Sbjct: 237 NAWKVARQEIEAYLGHGVRMEIEPGRFLVAEAGCLVSEVRVVKTAGQHHFVLVDTGFNDL 296 Query: 312 MRPTLYDAYHEIN--YIVNPAGDRLHIHADIVGPICETGDFIALN------RKIALPRPG 363 MRP +Y AYH ++ +R + GP+CE+GD + R + R G Sbjct: 297 MRPAMYGAYHGMSLLDAAGHPVERPQQLTVVGGPLCESGDIFTQDDECLTPRPLPQARVG 356 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 DLL + TGAYGA S YNSR L+PE++ Q +IR R +L+ L+ Sbjct: 357 DLLVLHDTGAYGASMSSNYNSRPLLPEVLFENGQPKLIRRRQPLADLLALE 407 >gi|319401317|gb|EFV89528.1| diaminopimelate decarboxylase [Staphylococcus epidermidis FRI909] Length = 421 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 117/421 (27%), Positives = 187/421 (44%), Gaps = 21/421 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 G L SL+ +A TP Y I + AF+ + YA KA + Sbjct: 8 NGELTMGGTSLKTIAQSFGTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCI 67 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 ++K + LD+VSEGEL AL A ++RI F G KT EI AL + I F V+ Sbjct: 68 QMVKLIDEENLQLDVVSEGELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVD 127 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + E+ +++ A S + RVNP + A+TH+ I TG+++ KFG+ I +L A Sbjct: 128 TLEEIDLIDKYADSNV---DVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVN 184 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +++ G+ HIGSQI+ E+ K K++ + R + +++GGG GI Sbjct: 185 KVKATKHLQLKGIHFHIGSQIEGTEAMIKTAKIVLNWLASER---IEVSLLNIGGGFGIK 241 Query: 244 YHSDHRPPSSSD-------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y Q +I +EPGR +V + GI + +V +IK Sbjct: 242 YVEGDESFPIEQGISEITEAIKETAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDI 301 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M+D +R LY A +E + ++ + I G +CE+GD I + Sbjct: 302 PGVNKYVSVDGGMSDHIRTALYGAQYEALLVNR--NEKANESVTIAGKLCESGDIIVRDA 359 Query: 356 KIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ GD L + TGAY + YN P + + + R + ++LI D Sbjct: 360 QLPSSVHRGDYLAVLSTGAYHYSMASNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIND 419 Query: 415 S 415 + Sbjct: 420 T 420 >gi|300712120|ref|YP_003737934.1| diaminopimelate decarboxylase [Halalkalicoccus jeotgali B3] gi|299125803|gb|ADJ16142.1| diaminopimelate decarboxylase [Halalkalicoccus jeotgali B3] Length = 409 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 120/403 (29%), Positives = 190/403 (47%), Gaps = 9/403 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L LA TP Y + +NY + AF V YA KAN+ + V+ TL+ G+ Sbjct: 15 RLAGLADTHGTPLYVQDLDRVRENYARMAAAFPE--GRVMYAAKANTAKTVLGTLSDAGA 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G++ S GE+ RALAA ER+ ++ V ++D A+ + + + R Sbjct: 73 GIECASAGEVERALAAGCLPERVQYTAVNPPEADLDYAVSIADDHPELTITAGAEDTIDR 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G + RVNP + A H+K+ + KFG+PI + L A + G+ Sbjct: 133 LAERGFSGRLCLRVNPGVGAGHHEKV-STGANAKFGVPIERAPDLLDKAD--ERFDVVGI 189 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H GS I E +L+ + + R +++ +DVGGG G+ Y P Sbjct: 190 HAHAGSGI-SGEDLAAHRELVSRMGELARRTDLDLEFVDVGGGFGVPYREGEEPLDLQAV 248 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 A + G ++ + +EPGR+LVAD G+L+T+V ++K + ++ V +D M RP + Sbjct: 249 ARATREALGEVEATLAVEPGRYLVADAGVLLTRVNTVKPAGEELVVGVDAGMTTLARPAI 308 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 Y A+H I + G+R + A + GPICE+GD + P GDLL + GAYG Sbjct: 309 YGAHHGIRSLAE--GERETVEATVTGPICESGDVFGEY-DLPAPERGDLLAVGNAGAYGY 365 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 + YNSR ++V+G + R R T ++ L+ W Sbjct: 366 EMASQYNSRPRPATVVVDGENSGVDRRRETLADVTRLEREVTW 408 >gi|311743945|ref|ZP_07717751.1| diaminopimelate decarboxylase [Aeromicrobium marinum DSM 15272] gi|311313075|gb|EFQ82986.1| diaminopimelate decarboxylase [Aeromicrobium marinum DSM 15272] Length = 469 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 123/430 (28%), Positives = 193/430 (44%), Gaps = 24/430 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G L S+ +LA TP Y + F AFD D V YA KA + A Sbjct: 43 DGVLTVAGESVTELATEFGTPLYVLDEDDFRRRARAFREAFDTAD--VYYAGKAFLSVAT 100 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ + GEL A+AA P RI G K++ E+ AL+ G+ V+S Sbjct: 101 ARWVAEEGLNLDVCTGGELAVAMAADFPPARIGLHGNNKSVAELRRALELGVGRIIVDSV 160 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY----- 182 E+ L LG A + RV + A+TH+ IST ++ KFG IH Sbjct: 161 EEIDRLVGLTEELGVTARVMVRVTAGVEAHTHEYISTAHEDQKFGFSIHGREGRPSDALQ 220 Query: 183 --AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGG 239 PG+K+ G+ HIGSQI + F A + + L ++ R G + D+GGG Sbjct: 221 AVRRIVAAPGLKLLGLHSHIGSQIFVTDGFEVAARRVLRLQAEIERELGVTLPEFDLGGG 280 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKV-- 290 GIAY + P D A + + + K+ +EPGR +V + +V Sbjct: 281 FGIAYTTQDDPRHPQDLAREMVKIVHDECGALDIGVPKLSIEPGRAIVGPSTFTLYEVGT 340 Query: 291 ---ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 +++ A + +V +D M+D +R LY A + + + + + + + +VG CE+ Sbjct: 341 TKEVALDGGASRRYVAVDGGMSDNIRTALYSADY-SATLASRSSEAPAVLSRVVGKHCES 399 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 GD + + + GDL+ + TGAY + YN + V + +I R T Sbjct: 400 GDIVVKDEYLPADVAAGDLVAVPGTGAYCRSLASNYNHVPRAAVVAVREGEARLILRRET 459 Query: 407 FQELIELDSI 416 +L+ LD I Sbjct: 460 EDDLLRLDVI 469 >gi|256377328|ref|YP_003100988.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827] gi|255921631|gb|ACU37142.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827] Length = 437 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 106/417 (25%), Positives = 183/417 (43%), Gaps = 21/417 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L V +LA TP + F V +A KA +AV Sbjct: 32 GELLLGGVPATELAARFGTPCQVLDEGTVRARARGFREVLPE--AEVVFAGKALPCRAVY 89 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + +A G LD+ S GEL A + PAERI+ G KT +++ AL G+ V+S Sbjct: 90 RWVADEGLSLDVCSAGELAIARSVGFPAERILLHGNVKTPEDLKAALGYGVGRVVVDSFD 149 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-- 186 E++ L + RV P ++ TH+ ++TG ++ KFG P+ +L A Sbjct: 150 EIEQLGA---LARGPQDVLVRVTPGVDPRTHRAVATGVEDQKFGFPLAGGDALEAVLRVV 206 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 P +++ G+ H+GSQ+ + + +A + + L I+ +D+GGG + Y Sbjct: 207 EQPSLRLVGLHCHVGSQVRHVAVYEEAARRMVGLIASCGVR---IEQLDLGGGFAVPYLP 263 Query: 247 DHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADK 299 +A + + ++++EPGR +VA G+ + +V ++K+ + Sbjct: 264 GEGEFDLGGFAHRVRVALSHECALRRVPVPRLLIEPGRSVVAGAGVTLYRVAAVKRGVRR 323 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA- 358 FV +D M+D RP LY + + + + +VG CE GD +A + + Sbjct: 324 VFVAVDGGMSDNPRPALYGSRYAVRLVGR---GGRRAPVTVVGRHCEAGDVLAEDVPLPA 380 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 R GDLL + TGAY + YN+ P + V ++ R T ++++ + Sbjct: 381 DVRAGDLLAVPVTGAYHHALASNYNAVGRPPVVGVRDGVARVLVRRETEEDVLRREV 437 >gi|260599186|ref|YP_003211757.1| diaminopimelate decarboxylase [Cronobacter turicensis z3032] gi|260218363|emb|CBA33402.1| Diaminopimelate decarboxylase [Cronobacter turicensis z3032] Length = 420 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 116/412 (28%), Positives = 186/412 (45%), Gaps = 27/412 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L P + Y I FD ++ +A KA SN +++ + G +D Sbjct: 20 LPAQYGGPVWVYDAQIIRTQIDRLRQ-FD----VIRFAQKACSNIHILRLMREAGVKVDS 74 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RA+AA R + T D +D A + ++ V + + ++ ++ Sbjct: 75 VSLGEIERAIAAGYDP-RQNPDDIVFTADVLDEATLARVHELGVPVNAGSVDMLEQLGAV 133 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + R+NP +K +TG + K GI + + A +K+ G+ MHI Sbjct: 134 SPGHRVWLRINPGFGHGHSQKTNTGGENSKHGIWYSDLPAALA-VMQRYQLKLIGMHMHI 192 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 GS + + ++ + Q+ G +++ I GGGL I Y + Y L Sbjct: 193 GSGV----DYGHLERVCGAMVSQVIEFGQDLEAISAGGGLSIPYREGDETIDTGHYFGLW 248 Query: 261 HQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 ++ K+ +EPGRFLVA+ G+LV +V S+K+ + FV++D ND MRP Sbjct: 249 NRAREQIAEHFGHPIKLEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRP 308 Query: 315 TLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGD 364 ++Y +YH I D + + GP+CE+GD R + RPGD Sbjct: 309 SMYGSYHHISALAADGRDLRDAPRLDTVVAGPLCESGDVFTQQEGGKVETRALPAVRPGD 368 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 L + TGAYGA S YNSR L+PE+++ + IR R T EL+ L+ Sbjct: 369 YLVLHDTGAYGASMSSNYNSRPLLPEVLLENGEARTIRRRQTIDELLALERF 420 >gi|152996024|ref|YP_001340859.1| diaminopimelate decarboxylase [Marinomonas sp. MWYL1] gi|150836948|gb|ABR70924.1| diaminopimelate decarboxylase [Marinomonas sp. MWYL1] Length = 415 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 110/418 (26%), Positives = 180/418 (43%), Gaps = 30/418 (7%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L ++ TP + Y I + FD ++ +A KA SN V++ + G Sbjct: 9 LVEITQQFGTPAWVYDAATIRHQIRQLRD-FD----VIRFAQKACSNIHVLRLMREEGVM 63 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ R+L A S V ++ + ++ + R Sbjct: 64 VDAVSAGEIERSLVAGYSNSDNPDSIVFTADLIDRETIEL-VIQHDIPVNIGSMDMLHRI 122 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + RVNP +K +TG K GI + + A + G+ Sbjct: 123 AEVAPHHSVWIRVNPGFGHGHSEKTNTGGPNSKHGITLEDLPRAVALIQQYGL-DLIGIH 181 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS F + + + + ++ +I+ I GGGL + Y SD + + Sbjct: 182 MHIGSGS----DFEHLSQACQAMVEIVKLANVDIRAISTGGGLPVPYLSDDEELDAKAFF 237 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 L + K+ +EPGR+LV + G L+ +V +K +A+ FV++D ND Sbjct: 238 RLWNDARKEIESHLGHSVKLEVEPGRYLVGNAGALLAEVHCLKSTAEHNFVLVDAGFNDL 297 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHI------HADIVGPICETGDFIALNRK-------IA 358 +RP++Y +YH+I + + + + GP+CE+GD N + Sbjct: 298 IRPSMYGSYHKIEVVHQHSNQQGLESISNALEYAVAGPLCESGDVFTQNGNGVICHQILD 357 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 PR GDLL G YGA S YNSR L PEIM++ QF +IR R +L+ L+++ Sbjct: 358 NPRVGDLLVFNDAGGYGASMSSNYNSRPLAPEIMIDEGQFRLIRKRQKISDLLALENL 415 >gi|251810828|ref|ZP_04825301.1| diaminopimelate decarboxylase [Staphylococcus epidermidis BCM-HMP0060] gi|282876164|ref|ZP_06285031.1| diaminopimelate decarboxylase [Staphylococcus epidermidis SK135] gi|251805663|gb|EES58320.1| diaminopimelate decarboxylase [Staphylococcus epidermidis BCM-HMP0060] gi|281295189|gb|EFA87716.1| diaminopimelate decarboxylase [Staphylococcus epidermidis SK135] gi|329732907|gb|EGG69252.1| diaminopimelate decarboxylase [Staphylococcus epidermidis VCU028] Length = 421 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 118/421 (28%), Positives = 187/421 (44%), Gaps = 21/421 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 G L SL+ +A TP Y I + AF+ + YA KA + Sbjct: 8 NGELTMGGTSLKTIAQSFGTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCI 67 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 ++K + LD+VSEGEL AL A ++RI F G KT EI AL S I F V+ Sbjct: 68 QMVKLIDEENLQLDVVSEGELYTALEAGFDSKRIHFHGNNKTKREIQYALDSQIGYFVVD 127 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + E+ +++ A S + RVNP + A+TH+ I TG+++ KFG+ I +L A Sbjct: 128 TLEEIDLIDKYADSNV---DVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVN 184 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +++ G+ HIGSQI+ E+ K K++ + R + +++GGG GI Sbjct: 185 KVKATKHLQLKGIHFHIGSQIEGTEAMIKTAKIVLNWLASER---IEVSLLNIGGGFGIK 241 Query: 244 YHSDHRPPSSSD-------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y Q +I +EPGR +V + GI + +V +IK Sbjct: 242 YVEGDESFPIEQGISEITEAIKETAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDI 301 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M+D +R LY A +E + ++ + I G +CE+GD I + Sbjct: 302 PGVNKYVSVDGGMSDHIRTALYGAQYEALLVNR--NEKANESVTIAGKLCESGDIIVRDA 359 Query: 356 KIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ GD L + TGAY + YN P + + + R + ++LI D Sbjct: 360 QLPSSVHRGDYLAVLSTGAYHYSMASNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIND 419 Query: 415 S 415 + Sbjct: 420 T 420 >gi|225010651|ref|ZP_03701121.1| diaminopimelate decarboxylase [Flavobacteria bacterium MS024-3C] gi|225005204|gb|EEG43156.1| diaminopimelate decarboxylase [Flavobacteria bacterium MS024-3C] Length = 414 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 125/406 (30%), Positives = 192/406 (47%), Gaps = 20/406 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLG 75 L +A P Y Y I+ Y + AF G+ + YA KA SN ++++ + LG Sbjct: 5 DLLGVAKEFGAPVYVYDAEKIKSQYNRLTTAFSGVSKLKLNYAAKALSNISILRLMNSLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 SGLD VS E++ L A I+F+ G +++E++ A G+ L + Sbjct: 65 SGLDTVSIQEVQLGLKAGFKPSDIIFTPNGVSLEELETAAGLGVRINIDNLS-----LLE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + S + P+ R+NP + A + IS G + KFGI IHQI + +TL + I+G Sbjct: 120 QFGSKHPEIPVCIRINPHVMAGGNANISVGHIDSKFGISIHQIPHILR-ITTLTKMNING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I IE F A ++L + N N+ ID G G + Y + + Sbjct: 179 IHMHTGSDILDIEVFLYASEILF----ETAKNFKNLDFIDFGSGFKVPYKEGDIETNIEE 234 Query: 256 YASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + F + + EPG+FLV++ G + KV +K++ F +D N Sbjct: 235 LGDKLSKRFNDFCEQYGKPLTLAFEPGKFLVSEAGSFLAKVNVVKQTTSTVFASIDSGFN 294 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 +RP LY + H IN I NP+G +VG ICET D A NRKIA GD+L + Sbjct: 295 HLIRPMLYGSTHGINNISNPSGRERF--YSVVGYICET-DTFATNRKIAEITEGDILCFK 351 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY + YNSR E++ + H+IR T ++++ Sbjct: 352 NAGAYCFTMASNYNSRFRPAEVLWYMGEAHLIRAAETMEDIMRNQI 397 >gi|260797946|ref|XP_002593961.1| hypothetical protein BRAFLDRAFT_118823 [Branchiostoma floridae] gi|229279194|gb|EEN49972.1| hypothetical protein BRAFLDRAFT_118823 [Branchiostoma floridae] Length = 447 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 137/420 (32%), Positives = 216/420 (51%), Gaps = 16/420 (3%) Query: 9 GSLHAENVSL----EKLAHVVQ----TPFYCYSTTAIEKNYLTFSNAFDG-MDTMVC-YA 58 G L E V + E L+ + +PFY YS + + N + A + V Y+ Sbjct: 16 GFLWCEGVRVKSLQEDLSRRLPRPSCSPFYLYSLSQVRHNVSRYKEALKTLPNPHVLGYS 75 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 LKAN N ++KTL +G G VS E+R AL A + IV++G GK E++LA++ Sbjct: 76 LKANGNLEILKTLRAMGCGAVTVSGNEIRLALTAGFSPDSIVYNGNGKQDWELELAVRVN 135 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 NV+S+ +L+ + A ++ ++A + R+NPDI+ H STG KFG+ Q+ Sbjct: 136 CL-INVDSDFDLRHVRSAADTVRQRARVLIRINPDIDPRVHPYNSTGLASSKFGLECSQL 194 Query: 179 HSLYAYASTLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDV 236 L P ++ G+ H+GS I + F ++ + +RS H+++++++ Sbjct: 195 PGLLEKVRRWPAQLQLVGLHCHLGSTITDVSLFRDVVSVVSAEMESVRSQGFHDLRYLNM 254 Query: 237 GGGLGIAYHSDHR--PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GGGLGI Y PS +D S I + +ILEPGR ++ D ILVTKVI +K Sbjct: 255 GGGLGIDYLRQQDSTNPSPADLVSSIRDALTDKNICLILEPGRSIIGDAAILVTKVIGVK 314 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHE-INYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + K FV+ D +M + +RP+LY AYH + A D D+VGP+CE GDF+ Sbjct: 315 GNGKKRFVVTDGSMTEVIRPSLYSAYHHIQLTEPSQAEDPTEQEYDVVGPVCECGDFLGK 374 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 +R I P G L + GAY + + YN R+ E++V+G+ + IR T +++ Sbjct: 375 DRTIPTPHEGCGLVVFDVGAYCSSMASNYNMRIRPAEVLVDGATWRFIRRPETLEDMTRC 434 >gi|19552404|ref|NP_600406.1| diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC 13032] gi|62390068|ref|YP_225470.1| diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC 13032] gi|118302|sp|P09890|DCDA_CORGL RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|40514|emb|CAA30445.1| unnamed protein product [Corynebacterium glutamicum] gi|21323947|dbj|BAB98573.1| Diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC 13032] gi|41325404|emb|CAF19884.1| DIAMINOPIMELATE DECARBOXYLASE [Corynebacterium glutamicum ATCC 13032] Length = 445 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 111/424 (26%), Positives = 186/424 (43%), Gaps = 18/424 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + V L LA TP + + AF G V YA KA + Sbjct: 23 EDGVVTVAGVPLPDLAEEYGTPLFVVDEDDFRSRCRDMATAFGGPG-NVHYASKAFLTKT 81 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G LDI S EL ALAA PA RI G K ++ + +Q+G+ ++S Sbjct: 82 IARWVDEEGLALDIASINELGIALAAGFPASRITAHGNNKGVEFLRALVQNGVGHVVLDS 141 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAY 184 EL+ L+ A GK + RV P I A+TH+ I+T ++ KFG + Sbjct: 142 AQELELLDYVAAGEGKIQDVLIRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAFEAAKA 201 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIA 243 A+ + + G+ H+GSQ+ E F A + + L Q G + +D+GGG GIA Sbjct: 202 ANNAENLNLVGLHCHVGSQVFDAEGFKLAAERVLGLYSQIHSELGVALPELDLGGGYGIA 261 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKV-----I 291 Y + P + ++ AS + G + +++EPGR + + + +V + Sbjct: 262 YTAAEEPLNVAEVASDLLTAVGKMAAELGIDAPTVLVEPGRAIAGPSTVTIYEVGTTKDV 321 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 + + ++ +D M+D +RP LY + ++ + A + + IVG CE+GD + Sbjct: 322 HVDDDKTRRYIAVDGGMSDNIRPALYGSEYDARVVSRFA-EGDPVSTRIVGSHCESGDIL 380 Query: 352 ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + GD L + TGAY S YN+ + V ++ R T ++ Sbjct: 381 INDEIYPSDITSGDFLALAATGAYCYAMSSRYNAFTRPAVVSVRAGSSRLMLRRETLDDI 440 Query: 411 IELD 414 + L+ Sbjct: 441 LSLE 444 >gi|152971771|ref|YP_001336880.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896361|ref|YP_002921097.1| diaminopimelate decarboxylase [Klebsiella pneumoniae NTUH-K2044] gi|150956620|gb|ABR78650.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548679|dbj|BAH65030.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 420 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 123/433 (28%), Positives = 193/433 (44%), Gaps = 30/433 (6%) Query: 1 MSAFKY-FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M Y + L A+N L +L P + Y I + S FD +V +A Sbjct: 1 MPHSLYATDTDLTADN--LLRLPAEFGCPVWVYDAQIIRRQIAQLSQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA ++ + T D ID A + Sbjct: 54 KACSNIHILRLMREQGVKVDSVSLGEIERALAAGYDPQQN-PEDIVFTADLIDDATLDRV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 + + + + + + RVNP +K +TG + K GI + Sbjct: 113 KALQIPVNAGSIDMLSQLGEVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ + + I I + ++ + +Q+ G ++Q I GGG Sbjct: 173 -----AALEVMRRYQLQLVGIHMHIGSGVDYGHLEQVCGAMVRQVVDFGQDLQAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I Y ++ Y L ++ K+ +EPGRFLVA+ G+LV++V S+ Sbjct: 228 LSIPYREGEEAIDTAHYYGLWNRAREQIAAHLGHPVKLEIEPGRFLVAESGVLVSQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + D + + GP+CE+GD Sbjct: 288 KEMGSRHFVLIDAGFNDLMRPAMYGSYHHITALAGDGRDLSAAPQVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + PGD L + TGAYGA S YNSR L+PE++ +G + +IR Sbjct: 348 FTQQEGGKVETRLLPAVAPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDGGKARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T QEL+ L+ I Sbjct: 408 RQTIQELLALELI 420 >gi|321471945|gb|EFX82917.1| hypothetical protein DAPPUDRAFT_316211 [Daphnia pulex] Length = 489 Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 134/439 (30%), Positives = 209/439 (47%), Gaps = 32/439 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQ--------------TPFYCYSTTAIEKNYLTFSNAF 48 AF Y + + EN + ++ + ++ TP Y YS + +N ++ +A Sbjct: 49 AFYYLNDNFYCENSPVHQIENELEKTSGCDDDDDDRSATPLYIYSQAQLHRNIQSYKDAI 108 Query: 49 DGMDT----MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGV 104 + YA+KAN N +++ + G VS EL+ AL E I+ +G Sbjct: 109 QSAGMSGRMHIFYAVKANPNLHLMELVRKQNCGAVTVSGYELKAALNTGFVPEMILLNGN 168 Query: 105 GKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIST 164 GK + EI LAL++G NV+S + + + A L K A + RVNP + ++ S Sbjct: 169 GKQMWEIRLALKNGCM-LNVDSYFDAENIISVARQLQKTARVLIRVNPGLEQSSTPVHSY 227 Query: 165 GK---KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT 221 K KFGIP+HQ + +++ G+ H+GS I + ++L D+ Sbjct: 228 LSTALKNSKFGIPLHQFDQVLELLRAEHFIQVVGLHCHVGSTIRDAFIYSDVTRILLDIR 287 Query: 222 QQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG-----NLQCKIILEPG 276 Q+L + G+ GG + S +S ++I+EPG Sbjct: 288 QKLITQGYAHLKYLDIGGGLGIDYYHGTNQEQSPLSSTGELIQAIASLLPPDVEVIIEPG 347 Query: 277 RFLVADVGILVTKVISIK--KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL 334 R LVA+ GILVTKV+ K K FV++D AMND +RP+ Y AYH + + Sbjct: 348 RSLVANTGILVTKVLGSKKSPDGGKNFVVVDAAMNDLIRPSFYQAYHHVLPVRKSISS-- 405 Query: 335 HIHADIVGPICETGDFIALNRKI-ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 DIVGPICE+GDF+A++R++ P GDL+ I GAYG + YN R E++V Sbjct: 406 EGTYDIVGPICESGDFLAVDRRLAQEPVKGDLMAIMDIGAYGMAMASNYNMRARAAEVLV 465 Query: 394 NGSQFHIIRPRMTFQELIE 412 +G+ + IIR R F+ L+ Sbjct: 466 DGNSWKIIRRRENFESLVR 484 >gi|289706374|ref|ZP_06502732.1| diaminopimelate decarboxylase [Micrococcus luteus SK58] gi|289556869|gb|EFD50202.1| diaminopimelate decarboxylase [Micrococcus luteus SK58] Length = 494 Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 119/453 (26%), Positives = 189/453 (41%), Gaps = 40/453 (8%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------DTMVCYALKA 61 +G L + + LA TP F FD V YA K+ Sbjct: 44 DGELTVQGLRASALAAEFGTPLLVVDEDDFRARARAFREGFDAAFADLCGGADVYYAGKS 103 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + + A G +D S GEL ALAA V I G K+ E+ AL++G+ Sbjct: 104 MLTLSTARWAAEEGLRVDTASGGELAIALAAGVDPAHIGLHGNNKSDAELRTALEAGVGR 163 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V+S EL L A G++AP+ R+ P ++A+TH I+T ++ KFG+ + + Sbjct: 164 IIVDSLDELTHLAALASEAGRRAPVMLRLTPGVHAHTHDFIATAHEDQKFGLSLAPASTD 223 Query: 182 YA--------------YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 A +++ GV HIGSQI + E F A + + ++++ Sbjct: 224 RDGNVAGRSPAAVAVAAALAAESIELLGVHCHIGSQIFEAEGFGLAAGRVLEFLAEVKAE 283 Query: 228 GHNIQ-HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFL 279 +D+GGG GIAY + P +++ A + +I LEPGR + Sbjct: 284 HGVELAELDLGGGHGIAYTAVDEPRPAAEIADALADDVQKTVERLGLTCPRISLEPGRAI 343 Query: 280 VADVGILVTKVISIKKSA---------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 G+ + V K + +V +D M+D RP LYDA + Sbjct: 344 SGPAGLTLYTVGVTKTVDVDAPDGGTAARRYVAVDGGMSDNPRPVLYDADY-TAVSARRT 402 Query: 331 GDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIP 389 + + + +VG CE+GD + + + GDLL + TGAY V S YN+ Sbjct: 403 SEAEPLLSRVVGKHCESGDILVRDVYLPADLGRGDLLAVPATGAYTHVMSSNYNALARPA 462 Query: 390 EIMVNGSQFHIIRPRMTFQELIELDSIPAWLQK 422 + V+G Q +I R T ++L ++ P L + Sbjct: 463 VVAVSGGQARVIIRRETQEDLFAREADP-RLAR 494 >gi|169628249|ref|YP_001701898.1| diaminopimelate decarboxylase LysA [Mycobacterium abscessus ATCC 19977] gi|169240216|emb|CAM61244.1| Probable diaminopimelate decarboxylase LysA [Mycobacterium abscessus] Length = 448 Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 112/421 (26%), Positives = 187/421 (44%), Gaps = 18/421 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G + +L ++A +TP Y + + + V YA KA Sbjct: 31 EQGRMCVGETALSEIADQFRTPAYVLDEEDFRHRARRYRSTLREI--EVAYAGKALLTAD 88 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + +A G LD+ S GEL ALA ERI+ G KT DE+ A G+ V+S Sbjct: 89 IARWVAQEGLSLDVCSSGELATALAGGFDPERIIMHGNAKTPDELSDAAAVGVGRIVVDS 148 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 +E+ L L K+ + RV PDI+ + H ++TG + KFG P+H+ H++ A Sbjct: 149 YTEIMFLA---TRLAKRQRVLVRVTPDIDIHGHAAVTTGVTDQKFGFPLHEGHAIEAARR 205 Query: 187 TLPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGIA 243 L + G+ HIGSQ+ + + + + +R+ I +++GGG G+ Sbjct: 206 VLDQPLLNLVGLHCHIGSQVTDCALYGETIRRMIAAMADIRARHGVILGELNIGGGHGVP 265 Query: 244 YHSDHRPPSSSDYASLIHQYF-------GNLQCKIILEPGRFLVADVGILVTKVIS-IKK 295 Y S ++ I + ++++EPGR + A G+ + +V+S + Sbjct: 266 YRSGDPELDLAELRDFIDDALDAACAAERFPRPRVVVEPGRAISARAGVTLYRVVSVKTQ 325 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +TFV +D M+D R +LY A + + N + G CE+GD IA + Sbjct: 326 PGGRTFVAVDGGMSDNPRVSLYSAKY-SVALANRHPSAPPQLVTVAGRHCESGDEIARDV 384 Query: 356 KIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + RPGD+L + TGAY + +YN P + V + + R T +L+ D Sbjct: 385 SLPSDVRPGDVLAVACTGAYHHSMASSYNLVGRPPVVAVRDGRVRELVRRETIADLLSRD 444 Query: 415 S 415 Sbjct: 445 R 445 >gi|172056531|ref|YP_001812991.1| diaminopimelate decarboxylase [Exiguobacterium sibiricum 255-15] gi|171989052|gb|ACB59974.1| diaminopimelate decarboxylase [Exiguobacterium sibiricum 255-15] Length = 437 Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 115/421 (27%), Positives = 184/421 (43%), Gaps = 15/421 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 L + V++ +LA TP Y + + T +AF +T +A KA + Sbjct: 10 QNNELQIDGVAVTELAKQYGTPLYVMAERELTDRLATVRDAFLKKYPNTYASFASKALTI 69 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 AV + + G G+D+V+ GEL A A VPAERI F G K+ ++ A++ G+ + Sbjct: 70 GAVYQQVVRHGLGIDVVTGGELFIARKAGVPAERIYFHGSNKSTQDLQYAVKEGVGKIVI 129 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 + E+ LNQ A + + R+ P + H KI TG + KFG H L A Sbjct: 130 DHYGEIAQLNQIAGDTCQTVQVLIRIVPQVIGGAHTKIQTGGVDTKFGFSTHDDSYLQAV 189 Query: 185 ASTLPGVKIS--GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 + L + G+ H+GSQI +IE F + + + + +R + GG Sbjct: 190 EAVLAAEHLVLLGIHCHVGSQIQEIELFERTARTMMGFVETIRERTSFVASEVNLGGGFG 249 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIIL--------EPGRFLVADVGILVTKVISIK 294 ++ P + + + + EPGR++VA+ G + V +IK Sbjct: 250 IAYTQDDQPLDFEQTMERVMAIIDEETTRLAIDRPRIGIEPGRWVVANAGTTLYTVGAIK 309 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + +D M D +RP LY A +E G+ H +VG CE+GD +A Sbjct: 310 EVQGVRTYLSVDGGMADNIRPALYGAVYETVIANRIKGETRH--VTVVGAACESGDLVAE 367 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + +A P GD L + TGAY + YN L + VN + + R T+ +LI+ Sbjct: 368 SADLAEPVSGDTLAVFGTGAYNYSMASNYNQFLRPAVVFVNQGESREVVRRQTYADLIQC 427 Query: 414 D 414 D Sbjct: 428 D 428 >gi|262039855|ref|ZP_06013128.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042760|gb|EEW43758.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 420 Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 123/433 (28%), Positives = 193/433 (44%), Gaps = 30/433 (6%) Query: 1 MSAFKY-FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M Y + L A+N L +L P + Y I + S FD +V +A Sbjct: 1 MPHSLYATDTDLTADN--LLRLPAEFGCPVWVYDAQIIRRQIAQLSQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA ++ + T D ID A + Sbjct: 54 KACSNIHILRLMREQGVKVDSVSLGEIERALAAGYDPQQN-PEDIVFTADLIDDATLDRV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 + + + + + + RVNP +K +TG + K GI + Sbjct: 113 KALQIPVNAGSIDMLSQLGEVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ + + I I + ++ + +Q+ G ++Q I GGG Sbjct: 173 -----AALEVMRRYQLQLVGIHMHIGSGVDYGHLEQVCGAMVRQVVDFGQDLQAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I Y ++ Y L ++ K+ +EPGRFLVA+ G+LV++V S+ Sbjct: 228 LSIPYREGEEAIDTAHYYGLWNRAREQIAAHLGHSVKLEIEPGRFLVAESGVLVSQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + D + + GP+CE+GD Sbjct: 288 KEMGSRHFVLIDAGFNDLMRPAMYGSYHHITALAADGRDLSAAPQVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + PGD L + TGAYGA S YNSR L+PE++ +G + +IR Sbjct: 348 FTQQEGGKVETRLLPAVAPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDGGKARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T QEL+ L+ I Sbjct: 408 RQTIQELLALELI 420 >gi|110667471|ref|YP_657282.1| diaminopimelate decarboxylase [Haloquadratum walsbyi DSM 16790] gi|109625218|emb|CAJ51638.1| diaminopimelate decarboxylase [Haloquadratum walsbyi DSM 16790] Length = 464 Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 116/394 (29%), Positives = 187/394 (47%), Gaps = 4/394 (1%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL LA +TP Y + +N +AF + YA+KA+S QAV+K + G Sbjct: 29 SLCNLAAEFETPLYVIDAQRVRENCARLLDAFPA--ATIRYAIKAHSGQAVLKVIRDAGI 86 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 ++ S GE++ ALAA RI ++ V ++D + + +R Sbjct: 87 DVECASAGEVKAALAAGFNGNRIQYTAVNPPARDLDAIINWWQENKQLTITVGAADTVER 146 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G + RVNP++ A H+K++T KFGIP ++ L +T + Sbjct: 147 LQERGFDGRLCIRVNPNVGAGHHEKVTT-GANAKFGIPYERVSELATQWATEFDLVGIHA 205 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 G + + S + + + L + + +++ +DVGGG G+ Y ++ P Sbjct: 206 HAGSGISGEDLSSHEELVRRMGTLARTITECAGSLEFVDVGGGFGVPYRANDPPLDIHTV 265 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 A G + + +EPGR++VAD G+L+T+V +IK + + T V +D M +RP + Sbjct: 266 AERTRDALGTVDATLAIEPGRYVVADAGVLLTRVNTIKSARETTVVGVDAGMTTLLRPAM 325 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 YDAYHEI I + + I GPICE+ D A R I+ P GD++ I GAYG Sbjct: 326 YDAYHEIENISA-SPTTDSMPVTIAGPICESSDIFAEGRSISAPTRGDIIAIGTAGAYGY 384 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + TYN+R E++ + + + R R T EL Sbjct: 385 EMASTYNARPRPAEVIYDDNTAKVARRRETRDEL 418 >gi|302809938|ref|XP_002986661.1| hypothetical protein SELMODRAFT_182543 [Selaginella moellendorffii] gi|300145549|gb|EFJ12224.1| hypothetical protein SELMODRAFT_182543 [Selaginella moellendorffii] Length = 501 Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 126/426 (29%), Positives = 214/426 (50%), Gaps = 22/426 (5%) Query: 8 EGSLHAENVSLEKLAHVVQ--TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 +G L+ E+ ++ + V PFY YS + +N+L + +A G+ ++V YA+KAN+N Sbjct: 72 DGFLYCEDRRVQDVMESVPEKRPFYLYSKPQLSRNFLAYQSALQGISSIVGYAIKANNNV 131 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ LGSG +VS ELR AL A R VF+G GK +E+ + N++ Sbjct: 132 KILEHFRSLGSGAVLVSGNELRLALHAGFDPTRCVFNGNGKLPEEL-VLAAQNDVLVNID 190 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 SE +L + + K + R+NPD++ H ++TG K KFGI ++ Sbjct: 191 SEFDLAHIVEAGKIANKCVRVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEI 250 Query: 186 STLPGV-KISGVDMHI----------------GSQIDQIESFHKAFKLLRDLTQQLRSNG 228 P K+ G H+ + Q+ F A L+ +++S G Sbjct: 251 KQHPNEVKLVGAHCHLGSTITKASISFFLFLLRKCVPQVNIFRDAALLMVQYMDEIKSQG 310 Query: 229 HNIQHIDVGGGLGI-AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 +++++++GGGLGI YH+ P+ D + + +I+EPGR LVA+ LV Sbjct: 311 FDLKYLNIGGGLGIDYYHTGAVLPTPRDLVDTVRDLVVSRGLTLIMEPGRSLVANAAALV 370 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 +V +K + +K F+++D +M++ +RP+LYDAY I + D D+VGP+CE+ Sbjct: 371 NRVTGVKTNGNKNFIVIDGSMSELIRPSLYDAYQHIELVAPAGSDAEVKTYDVVGPVCES 430 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMT 406 DF+ NR++ P+ GD + + GAY + TYN ++ PE + + IR T Sbjct: 431 ADFLGKNRELPTPKRGDGIVVHDAGAYCMSMASTYNLKMRPPEYWIEDDGSITKIRHAET 490 Query: 407 FQELIE 412 F + + Sbjct: 491 FDDHLR 496 >gi|239637088|ref|ZP_04678082.1| diaminopimelate decarboxylase [Staphylococcus warneri L37603] gi|239597438|gb|EEQ79941.1| diaminopimelate decarboxylase [Staphylococcus warneri L37603] Length = 421 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 115/423 (27%), Positives = 182/423 (43%), Gaps = 18/423 (4%) Query: 5 KYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKA 61 +Y E G L SL+ +A TP Y I + AF G+ + YA KA Sbjct: 4 EYNEYGELTMGGTSLKTVAQSFGTPTIVYDEEQIRNQMRRYHKAFQQSGLKYNISYASKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + ++K + LD+VSEGEL AL A RI F G KT EI AL++ I Sbjct: 64 FTCIQMVKLVQEEDLQLDVVSEGELYTALEAGFDPSRIHFHGNNKTKHEIKYALENHIGY 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F ++S E+ +++ A + RVNP + A+TH+ I TG+++ KFG+ I + Sbjct: 124 FVIDSLEEIDLIDRYASETV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIRYGLAN 180 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A + +HI IE + + + L ++ +++GGG G Sbjct: 181 EAIDKIKQTNHLHLKGVHIHIGSQ-IEGTEAFIETAKIVMNWLNDQQIHVDLLNLGGGFG 239 Query: 242 IAYHSDHRPPSS-------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y +D Q +I +EPGR +V + GI + +V +IK Sbjct: 240 IKYVEGDVSFPIESSIAEITDAIKNEAQQLNMETPEIGIEPGRSIVGEAGITLYEVGTIK 299 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + +D M+D +R LYDA ++ + + I G +CE+GD I Sbjct: 300 EIPEINKYVSIDGGMSDHIRTALYDAKYQALLVNRQ--EEADDTVTIAGKLCESGDIIIK 357 Query: 354 NRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N K+ + GD L I TGAY + YN + + + R + ++LI Sbjct: 358 NAKLPSSVQRGDYLAILSTGAYHYSMASNYNQMQKPSVFFIKDGKAREVIKRQSLRQLII 417 Query: 413 LDS 415 D+ Sbjct: 418 NDT 420 >gi|157372071|ref|YP_001480060.1| diaminopimelate decarboxylase [Serratia proteamaculans 568] gi|157323835|gb|ABV42932.1| diaminopimelate decarboxylase [Serratia proteamaculans 568] Length = 420 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 117/416 (28%), Positives = 182/416 (43%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + FD ++ +A KA SN +++ + G Sbjct: 16 NLLALPGRFGCPVWAYDAAIISERISQLR-HFD----VIRFAQKACSNIHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A S + T D +D A + + + + ++ Sbjct: 71 KVDSVSLGEIERALQAGFQPGGE-PSEIVFTADVLDHATLARVSELKIPVNVGSIDMLEQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + P+ R+NP +K +TG + K GI + K+ GV Sbjct: 130 LGQVSTGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQAVEKIQQYGL-KLIGV 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + ++ + QQ+ G +I I GGGL I Y + Y Sbjct: 189 HMHIGSGV----DYQHLERVCDAMVQQVIDLGQDISAISAGGGLSIPYQYGEEAIDTEHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + +EPGRFL+A+ G+LV +V ++K + FV++D ND Sbjct: 245 FGLWNSARERIAAHLGHPVSLEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLVDAGFND 304 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIH---ADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH I+ + D + I GP+CE+GD R++ Sbjct: 305 LMRPAMYGSYHHISLLPADGRDTANQPLRDTVIAGPLCESGDVFTQQAGGGIETRELPPV 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L TGAYGA S YNSR L+PE++ + +IR R T +ELI L+ I Sbjct: 365 QVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGEARLIRRRQTIEELIALELI 420 >gi|269794309|ref|YP_003313764.1| diaminopimelate decarboxylase [Sanguibacter keddieii DSM 10542] gi|269096494|gb|ACZ20930.1| diaminopimelate decarboxylase [Sanguibacter keddieii DSM 10542] Length = 462 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 121/434 (27%), Positives = 195/434 (44%), Gaps = 27/434 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYALKA 61 +G L ++ LA TP + F ++F G + V YA K+ Sbjct: 29 DGELTLAGLTATDLARDFGTPAFVLDEQHFRDRARLFRDSFSEAFGSVGAEVDVYYAGKS 88 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + AV + G +D + GEL AL A VP I G K+ DEI A+++ + Sbjct: 89 FLSVAVARWAREEGLRVDTCTGGELAVALRAGVPGAEIGLHGNNKSDDEITRAIEAEVGR 148 Query: 122 FNVESESELKTLNQRAVSLGK----KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH- 176 V+S +E+ + + A + G+ + P+ RV I+A H+ IST ++ KFG+ + Sbjct: 149 IVVDSFAEIDRVAELARAAGRDGGARVPVMVRVTTGIHAGGHEFISTAHEDQKFGVSLTG 208 Query: 177 -QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHI 234 Q + P +++ G HIGSQI +F A K+L + + G+ + + Sbjct: 209 GQALAALQAVLEHPELELLGAHTHIGSQIQDAAAFEANARKMLALRAELQAATGYLLPEL 268 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILV 287 D+GGG GIAY P A + G++ +I +EPGR +V + + Sbjct: 269 DLGGGYGIAYVPSDVPIDVPALARDLADVVGSVCAELGTTVPRISIEPGRSVVGSTTVTL 328 Query: 288 TKVISIKKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVG 342 V +K +T+V +D M+D +RP LY+A + + N G + A +VG Sbjct: 329 YTVGVVKPVTLEDGSVRTYVSVDGGMSDNIRPALYEAEY-TARLANRTGSAETVAARVVG 387 Query: 343 PICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHII 401 CE+GD + + ++ GDLL + TGAYG + YN L P + V +I Sbjct: 388 KHCESGDIVISDIELPADVARGDLLAVPATGAYGRSMASNYNHVLRPPVVAVADGAARVI 447 Query: 402 RPRMTFQELIELDS 415 R T +L+ LD Sbjct: 448 VRRETEDDLLSLDV 461 >gi|21227987|ref|NP_633909.1| diaminopimelate decarboxylase [Methanosarcina mazei Go1] gi|20906414|gb|AAM31581.1| Diaminopimelate decarboxylase [Methanosarcina mazei Go1] Length = 420 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 95/405 (23%), Positives = 152/405 (37%), Gaps = 16/405 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLG 75 + K+ TPF+ Y AI +N +AF +A+KA N ++K L G Sbjct: 12 DILKIMEKYPTPFHIYDEKAIRENARRMKSAFKDIPGFKEFFAVKALPNPFILKILKEEG 71 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G D S EL A A + + I+FS +E A + G + + Sbjct: 72 FGADCSSLPELILAEKAGMTGDDIMFSSNDTPAEEFIKAKELGGFINLDDISHIPYLE-- 129 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 I I +E K+G Q+ Y + Sbjct: 130 ---KSAGLPEIVCFRYNPGPLKEGNAIIGKPEEAKYGFTREQMFEGYRILRDKGVKRFGM 186 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 M ++++ A L + + + G + +++GGG+GI Y + P S Sbjct: 187 HTMVASNELNSDYFVETARILFELIVEISKELGIQFEFVNLGGGIGIPYRPEQEPVSLEA 246 Query: 256 YASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 A + + + KI LE GR + G L+++V +K S K +V LD M Sbjct: 247 VAKGVKEAYDATITANGLAPLKIYLECGRVITGPYGYLISQVRHLK-STYKDYVGLDSCM 305 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 + MRP +Y AYH I D+ G +CE D A++R + GD+L I Sbjct: 306 ANLMRPGMYGAYHHITVFGK-EKKAPAHKYDVTGSLCENNDKFAIDRMLPEVEIGDILAI 364 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+G YN +L E+++ IR T ++ Sbjct: 365 HDAGAHGHAMGFNYNGKLRSAELLLREDGSVVQIRRAETIEDYFA 409 >gi|330684722|gb|EGG96420.1| diaminopimelate decarboxylase [Staphylococcus epidermidis VCU121] Length = 421 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 120/425 (28%), Positives = 190/425 (44%), Gaps = 22/425 (5%) Query: 5 KYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKA 61 +Y E G L SL+ +A TP Y I + AF G+ + YA KA Sbjct: 4 EYNEYGELTMGGTSLKTVAQSFGTPTIVYDEEQIRNQMRRYHKAFQQSGLKYNISYASKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + ++K + LD+VSEGEL AL A RI F G KT EI AL + I Sbjct: 64 FTCIQMVKLVQEEDLQLDVVSEGELYTALEAGFDPSRIHFHGNNKTKHEIRYALDNHIGY 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F ++S E+ +++ A + RVNP + A+TH+ I TG+++ KFG+ I + Sbjct: 124 FVIDSLEEIDLIDRYASETV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIRYGLAN 180 Query: 182 YA--YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A + + GV +HIGSQI+ E+F + K++ + + +++GGG Sbjct: 181 EAVDKIKQAKHLNLKGVHIHIGSQIEGTEAFIETAKIVMNWLN---DQQIQVDLLNLGGG 237 Query: 240 LGIAYHSDHRPPSS-------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y +D +I +EPGR +V + GI + +V + Sbjct: 238 FGIKYVEGDVSFPIESGIAEITDAIKNEANQLNMETPEIGIEPGRSIVGEAGITLYEVGT 297 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK+ + +D M+D +R LYDA ++ + + + I G +CE+GD I Sbjct: 298 IKEIPEINKYVSIDGGMSDHIRTALYDAKYQALLVNRH--EEANDTVTIAGKLCESGDII 355 Query: 352 ALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 N K+ + GD L I TGAY + YN + + + R + ++L Sbjct: 356 IKNAKLPSSVQRGDYLAILSTGAYHYSMASNYNQMQKPSVFFIKDGKAREVIKRQSLRQL 415 Query: 411 IELDS 415 I D+ Sbjct: 416 IINDT 420 >gi|325289969|ref|YP_004266150.1| diaminopimelate decarboxylase [Syntrophobotulus glycolicus DSM 8271] gi|324965370|gb|ADY56149.1| diaminopimelate decarboxylase [Syntrophobotulus glycolicus DSM 8271] Length = 417 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 108/415 (26%), Positives = 171/415 (41%), Gaps = 15/415 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQ 65 + L N ++++A + TPF+ Y AI +N F AF YA+KA N Sbjct: 2 KKKELPFSNERIKEIAEIYGTPFHLYDEKAIRENARRFLKAFSWNPGFKEYYAVKAAPNP 61 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 ++K LA G G D S EL A + E IVF+ +E A + G + Sbjct: 62 YLLKILAEEGIGADCSSLSELILAEKTGITGENIVFTSNDTPANEFVKAKELGALINLDD 121 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 ++ +G I FR NP + I +E K+G+ Q+ YA A Sbjct: 122 ISH----IDFIHQHIGMPEMICFRYNPGPLRSGGNAIIGNPEEAKYGVTREQLFECYAKA 177 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 +L + M I ++++ A + + + + NI+ +D+GGG+GI Y Sbjct: 178 RSLGAKRFGIHTMIISNELNPDFFIETARMMFQLVAEIKEKLDINIEFVDLGGGIGIPYR 237 Query: 246 SDHRPPSSSDYASLIHQYF-------GNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + IH+ + K+ +E GR + G LV KV+ K+ Sbjct: 238 PEDTAVDLEYLGREIHKVYDDMIAAKHLHPLKLAVECGRMITGPYGYLVAKVLHKKEI-Y 296 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K ++ LD M D MRP LY +YH + D+ G +CE D A++R + Sbjct: 297 KNYIGLDACMADLMRPALYGSYHHLTVPGKQDLPYDQ-TYDVTGSLCENNDKFAVDRSLP 355 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 PGDL+ I GA+G YN +L E+++ +IR T + Sbjct: 356 PLDPGDLIIIHDAGAHGHAMGFNYNGKLRSQELLLKEDGSIQLIRRAETIDDYFA 410 >gi|212709365|ref|ZP_03317493.1| hypothetical protein PROVALCAL_00401 [Providencia alcalifaciens DSM 30120] gi|212688277|gb|EEB47805.1| hypothetical protein PROVALCAL_00401 [Providencia alcalifaciens DSM 30120] Length = 419 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 116/413 (28%), Positives = 179/413 (43%), Gaps = 27/413 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L L TP + Y + I AFD V +A KA SN +++ + G Sbjct: 17 LRALPAQFGTPVWVYDSEVIIDRIGQLK-AFD----TVRFAQKACSNIHILRLMREQGVK 71 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ RAL A R S + T D +D A + ++ + + Q+ Sbjct: 72 VDSVSLGEIERALVAGFQPGRE-KSEIVFTADVLDPATLLKVTELDIPVNAGSIDMLQQI 130 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 P+ R+NP +K +TG + K GI + A +K+ G+ Sbjct: 131 GEHKAGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWHQDLPEALAKIQQY-NLKLVGIH 189 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + + + + + S G +I I GGGL Y Y Sbjct: 190 MHIGSGV----DYQHLANVCDSMVELVVSAGVDIDAISAGGGLSTPYREHDEIIDVQHYY 245 Query: 258 SLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 SL ++ +EPGR+LVA+ G+L+ +V ++K + +V++D ND Sbjct: 246 SLWDNARQRIELHLGHHIELEIEPGRYLVAESGVLLAQVRAVKDMGSRHYVLVDSGFNDL 305 Query: 312 MRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIA-------LNRKIALPR 361 MRP +Y +YH I + + + GP+CE+GD R + + Sbjct: 306 MRPAMYGSYHHISVLPADGSSVDSQPLKETIVAGPLCESGDVFTQLEGGMVETRLLPDVK 365 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GD L TGAYGA S YNSR L+PE++ + +IR R T QEL+ L+ Sbjct: 366 VGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFVDGKPTLIRRRQTIQELLALE 418 >gi|162447649|ref|YP_001620781.1| diaminopimelate decarboxylase [Acholeplasma laidlawii PG-8A] gi|161985756|gb|ABX81405.1| diaminopimelate decarboxylase [Acholeplasma laidlawii PG-8A] Length = 420 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 122/416 (29%), Positives = 186/416 (44%), Gaps = 15/416 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIK 69 +++S E L QTP Y Y AI K F N F + + V YA KA A+ + Sbjct: 3 TIQHISFEDLKSKYQTPLYIYDEAAIRKQCKVFINKFRHPKVSSNVIYASKAFLTIAMAQ 62 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 + G LD VS+GEL AL A P E+IV G KT DE+ +AL + V+++ E Sbjct: 63 LIMSEGLHLDCVSQGELYTALKAGFPVEKIVLHGNNKTKDELLMALNFRVGTIIVDNDYE 122 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAYAST 187 LN+ K + RVNP I+A+THK I T + KFG+ I + + Sbjct: 123 ASILNEIVND-KYKVSVMLRVNPGIDAHTHKYIKTSTLDSKFGMSILDPRTKETIKSLND 181 Query: 188 LPGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 P + G HIGSQI + SF+ A +L+ + +++ +++GGG G+ Y Sbjct: 182 NPNINFLGTHSHIGSQILEEHSFYDHAITILKFYKEIKELYQIDLKAVNLGGGFGVKYIK 241 Query: 247 DHRP-------PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS-IKKSAD 298 P + + +EPGR +VA+ G + V + Sbjct: 242 SDTRLDLNKVLPELLEIVYQTANSLEISVPHVYIEPGRSIVAEAGYTLYTVNQIKETINK 301 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 K ++ +D AMND MR LY A ++ + + G CE+GD I + + Sbjct: 302 KKYLFIDGAMNDHMRTALYQAKYDAFIVGKEDM-VHDTTYTVAGKACESGDIIIEDILLP 360 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 +P DLL + TGAY + YN + P I V Q ++ + +F +L+ D Sbjct: 361 DAKPDDLLVVRTTGAYHYSMASHYNRLTIPPVIFVKDGQSKVVVRKESFMDLLSHD 416 >gi|255543757|ref|XP_002512941.1| diaminopimelate decarboxylase, putative [Ricinus communis] gi|223547952|gb|EEF49444.1| diaminopimelate decarboxylase, putative [Ricinus communis] Length = 488 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 128/411 (31%), Positives = 223/411 (54%), Gaps = 5/411 (1%) Query: 7 FEGSLHAENVSLEKLAHVV-QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 +G L+ EN+ ++ + V + PFY YS I +N + +A +G+++++ YA+KAN+N Sbjct: 75 NDGFLYCENLKVQDVMESVEKRPFYLYSKPQITRNVEAYKSALEGLNSIIGYAIKANNNF 134 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ L LG G +VS ELR AL A ++ +F+G GK ++++ LA + G++ NV+ Sbjct: 135 KILEHLRQLGCGAVLVSGNELRLALRAGYDPKKCIFNGNGKLLEDLVLAAEEGVF-VNVD 193 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 SE +L+ + + G+K + R+NPD++ H ++TG K KFGI ++ Sbjct: 194 SEFDLENIVAASRIAGEKINVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAV 253 Query: 186 STLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-A 243 P K+ G H+GS I +++ F A L+ + ++R+ G I ++++GGGLGI Sbjct: 254 KAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDEIRAQGFEIDYLNIGGGLGIDY 313 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 YH+ P+ D + + + +I+EPGR L+A+ LV +V +K + K F++ Sbjct: 314 YHAGAVLPTPRDLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFIV 373 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D +M + +RP+LYDAY I + D+VGP+CE+ DF+ R++ P G Sbjct: 374 IDGSMAELIRPSLYDAYQHIELVSPAQPIVEVSTFDVVGPVCESADFLGKGRELPTPSKG 433 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 L + GAY + TYN ++ PE + IR TF++ + Sbjct: 434 AGLVVHDAGAYCMSMASTYNLKMRPPEYWIEEDGSVTKIRHGETFEDHMRF 484 >gi|161506442|ref|YP_001573554.1| diaminopimelate decarboxylase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867789|gb|ABX24412.1| hypothetical protein SARI_04643 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 448 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 123/428 (28%), Positives = 195/428 (45%), Gaps = 29/428 (6%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 Y E L+AEN L +L+ P + Y I + FD +V +A KA SN Sbjct: 34 HYAETDLNAEN--LLRLSAEFGCPVWVYDARIIRRQITALQQ-FD----VVRFAQKACSN 86 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +++ + G +D VS GE+ RALAA + + T D ID A + + + Sbjct: 87 IHILRLMRAQGVKVDSVSLGEIERALAAGYDPQT-RPDDIVFTADVIDAATLARVSELRI 145 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 + + + + + R+NP +K +TG + K GI + + A Sbjct: 146 PVNAGSVDMLAQLGQVSPGHRVWLRLNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALA- 204 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 +K+ G+ MHIGS + + ++ + +Q+ G +++ I GGGL I Y Sbjct: 205 VMRQYRLKLVGIHMHIGSGV----DYGHLKQVCGAMVRQVLECGQDLEAISAGGGLSIPY 260 Query: 245 HSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + Y L + K+ +EPGRFLVA G+LVT++ S+K+ Sbjct: 261 REGEESVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQIRSVKQMGS 320 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN- 354 + FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 321 RRFVLVDAGFNDLMRPAMYGSYHRISALAADGRSLENGPKVETVVAGPLCESGDVFTQQE 380 Query: 355 ------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR R T + Sbjct: 381 GGMVETRVLPAVTPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIE 440 Query: 409 ELIELDSI 416 EL+ L+ + Sbjct: 441 ELLALEML 448 >gi|317506159|ref|ZP_07963981.1| diaminopimelate decarboxylase [Segniliparus rugosus ATCC BAA-974] gi|316255547|gb|EFV14795.1| diaminopimelate decarboxylase [Segniliparus rugosus ATCC BAA-974] Length = 451 Score = 225 bits (574), Expect = 8e-57, Method: Composition-based stats. Identities = 110/426 (25%), Positives = 193/426 (45%), Gaps = 19/426 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G++ V +++L +P + ++ AF + V YA KA + + Sbjct: 28 DGAVRLAGVRVDELIERYGSPLFVVDKDDFTDRCRRWAEAFGPRN--VHYASKAFLSGQL 85 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 L G LD+ S GEL AL P RI G K++ E+ A+ G+ ++S Sbjct: 86 AHWLDEEGLALDVCSGGELAIALRGGFPPGRITLHGNNKSVAELRRAVDVGVEAVVLDSF 145 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAYA 185 E+ L++ LG++ + R+ + A+TH+ I+T ++ KFG + Sbjct: 146 EEIARLDEVCAELGREQDVLVRLTVGVEAHTHEAIATAHEDQKFGFSVASGVALEAVRRV 205 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN---GHNIQHIDVGGGLGI 242 P +++ G HIGSQI ++ F A + ++ ++ +D+GGGLG+ Sbjct: 206 LARPRLRLIGFHSHIGSQILDLDGFRLAAGRVAAFAEEAVRALGAIPTLRVLDLGGGLGV 265 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQC----KIILEPGRFLVADVGILVTKVISIKKS-- 296 +Y D RPP+ SD A + + + +EPGR ++A + + V ++K Sbjct: 266 SYQPDERPPAPSDLAEAVRKEIEQYPAAAGLSVAVEPGRSVIASGTVTLYTVGTVKHVVL 325 Query: 297 ---ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 A +T+V +D M+D +RP LY A ++ + + +VG CETGD + Sbjct: 326 DGGATRTYVSVDGGMSDNIRPALYGAKYDARLVSRVGASEPAQ-SRVVGKHCETGDILVR 384 Query: 354 NRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 + + PGD+L + TGAY S YN+ L V + ++ R T +L+ Sbjct: 385 DCLLPQDVAPGDVLAVASTGAYCYSLSSRYNALLRPAVAAVEDGRSWLMLRRETEADLLS 444 Query: 413 LDSIPA 418 L+ +P Sbjct: 445 LE-VPD 449 >gi|229917988|ref|YP_002886634.1| diaminopimelate decarboxylase [Exiguobacterium sp. AT1b] gi|229469417|gb|ACQ71189.1| diaminopimelate decarboxylase [Exiguobacterium sp. AT1b] Length = 430 Score = 225 bits (574), Expect = 8e-57, Method: Composition-based stats. Identities = 127/417 (30%), Positives = 194/417 (46%), Gaps = 14/417 (3%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKT 70 E VS+ +L TP Y S +E+ +AF +T YA KA S AV + Sbjct: 11 IEGVSVRELQATYGTPLYIMSEPELERRLGIVRDAFLDKFPNTYALYASKALSIAAVYEK 70 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + G +D+VS GE+ AL A VPAERI G KTI +I AL+ GI F +++ E+ Sbjct: 71 VMAAGMSIDVVSRGEMYVALHAGVPAERIHVHGSNKTILDITYALEQGITHFTIDNMREI 130 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP- 189 L+ A ++ + R+ P + H I TG + KFG P H L A +TL Sbjct: 131 SLLSGLAAEYNREVDVLLRIVPQVVGGAHAAIQTGGVDTKFGFPTHDDTYLDAVRATLEA 190 Query: 190 -GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSD 247 +++ G+ H+GSQI F K + +R + +++GGG G+AY + Sbjct: 191 EHLQLKGIHCHVGSQIQDPTLFINTVKTMVRFMDTIRQETSYTTDVLNIGGGFGVAYLDE 250 Query: 248 HRPPSSSDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 + + + KI +EPGR+LVA+ G + +V ++KK + Sbjct: 251 DEYLDFAQTMEQVMETLVEEVEARELPLPKIGIEPGRWLVANAGATLYEVGTVKKVSGVR 310 Query: 301 FV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 +D M D +RP LYDA +E+ + + A IVG CE+GD I+ I Sbjct: 311 TFVSVDGGMTDNIRPALYDAEYEVVAATRM-NEEKTLEAKIVGACCESGDIISNRSLIPP 369 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDLL ++ TGAY + YN L + V ++ R TF++L+ + I Sbjct: 370 VTSGDLLLVKATGAYNFSMASNYNQMLRPAVVFVKDGNHRLVVRRQTFEDLVACEVI 426 >gi|168463825|ref|ZP_02697742.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195633600|gb|EDX52014.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 420 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 124/427 (29%), Positives = 190/427 (44%), Gaps = 29/427 (6%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 Y E L+AEN L +L P + Y I + FD +V +A KA SN Sbjct: 7 YAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQKACSNI 59 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ + G +D VS GE+ RALAA + + T D ID A + + ++ Sbjct: 60 HILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARVSELHIP 118 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + + + + I RVNP +K +TG + K GI + A Sbjct: 119 VNAGSVDMLTQLGQVSPGHRIWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP-----A 173 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + K + I I + ++ + +Q+ G +++ I GGGL I YH Sbjct: 174 ALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGGLSIPYH 233 Query: 246 SDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 P + Y L + K+ +EPGRFLVA G+LVT+V S+K+ + Sbjct: 234 EGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSR 293 Query: 300 TFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-- 354 FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 294 HFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDVFTQQEG 353 Query: 355 -----RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR R T +E Sbjct: 354 GMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEE 413 Query: 410 LIELDSI 416 L+ L+ + Sbjct: 414 LLALEML 420 >gi|268325882|emb|CBH39470.1| probable diaminopimelate decarboxylase [uncultured archaeon] Length = 432 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 105/432 (24%), Positives = 176/432 (40%), Gaps = 27/432 (6%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALK 60 KY L +NVS +L TP + S + +NY AF D + Y+ K Sbjct: 11 DHIKYENTELTIDNVSAVELIKEYGTPLFVISEKQVRQNYNRLRKAFSRYPDCTIAYSYK 70 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 N AV L H G+G ++VS EL A +P+ +I+F+G GK+ EI++ + I Sbjct: 71 TNYLPAVCNILHHEGAGAEVVSAFELLLAKKLGMPSSKIIFNGPGKSDKEIEMFIGDDIA 130 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 N +S EL+ +NQ A + GK + RV PD+ + I Q Sbjct: 131 LVNADSMEELERINQIAKAKGKIVDVGIRVKPDVP------DFFVCPKFGMDIATGQAFK 184 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y AS L + + G+ HIG++I S+ + + + L ++ + GG Sbjct: 185 AYQKASELKNLNVVGMHAHIGTKICSTRSYTEGIRQMAKLMSKVNAELGIEFEFFDIGGG 244 Query: 241 GIAYHSDHRPPSSSDY----------------ASLIHQYFGNLQCKIILEPGRFLVADVG 284 P+ + + ++LE GR ++ D Sbjct: 245 FGVPSFTPLFPTEEKVESTATIEQFGESIVEAFLSCISDYNLSEPTLVLELGRIIITDPA 304 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 +++T V K T V ++ + ++ Y+ + +R D+ GP+ Sbjct: 305 LILTMVEGTKVIGGST---KTVVVDAGVNLIMFAPYYYHRIVPVVNTERAKEAVDVYGPL 361 Query: 345 CETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPR 404 C D + +NRK+ + G L I GAY S + R P +MVNG + ++R Sbjct: 362 CMQMDVLGVNRKLPVLVRGFFLAILDAGAYSISLSQQFI-RPRPPVVMVNGGRKRLVRRG 420 Query: 405 MTFQELIELDSI 416 TF ++ L+S+ Sbjct: 421 ETFDDIFNLNSV 432 >gi|20089611|ref|NP_615686.1| diaminopimelate decarboxylase [Methanosarcina acetivorans C2A] gi|19914530|gb|AAM04166.1| diaminopimelate decarboxylase [Methanosarcina acetivorans C2A] Length = 420 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 95/404 (23%), Positives = 156/404 (38%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 + K+ TPF+ Y AI +N +AF + +A+KA N ++K L G Sbjct: 13 ILKITEKYPTPFHIYDEKAIRENARRMKSAFKDVPGFKEFFAVKALPNPFILKILKEEGF 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A A + + I+FS +E A + G + + Sbjct: 73 GADCSSLPELILAEKAGMTGDDIMFSSNDTPAEEFAKAKELGGFINLDDIS-----HIHY 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I I +E K+G Q+ Y + Sbjct: 128 LEKAAGLPEIVCFRYNPGPLKEGNAIIGKPEEAKYGFTREQMFEGYRVLRDKGVKRFGMH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M ++++ A L + + + G + +++GGG+GI Y + P S Sbjct: 188 TMVASNELNSDYFVETARILFELIVEISKELGIQFEFVNLGGGIGIPYRPEQEPVSLEAV 247 Query: 257 ASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 A + + + K+ LE GR + G LV++V +K S K +V +D M+ Sbjct: 248 AKGVKEAYNATITANGLAPLKVYLECGRIITGPYGYLVSQVRHLK-STYKDYVGMDSCMS 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + D+ G +CE D A++R + GD+L I Sbjct: 307 NLMRPGMYGAYHHITVLGK-ENKPPVHKYDVTGSLCENNDKFAIDRMLPEVEVGDILVIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ IR T ++ Sbjct: 366 DTGAHGHAMGFNYNGKLRSAELLLREDGSVVQIRRAETIEDYFA 409 >gi|289550807|ref|YP_003471711.1| Diaminopimelate decarboxylase [Staphylococcus lugdunensis HKU09-01] gi|289180339|gb|ADC87584.1| Diaminopimelate decarboxylase [Staphylococcus lugdunensis HKU09-01] Length = 421 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 118/425 (27%), Positives = 190/425 (44%), Gaps = 22/425 (5%) Query: 5 KYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKA 61 KY + G L SL+ LA TP Y I + +AF + YA KA Sbjct: 4 KYNDYGELTMGGTSLKTLALSFGTPTIVYDEDQIRHQMRRYHSAFKQSGLTYNISYASKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + ++K + G LD+VSEGEL AL+A ++I F G KT EI L++GI Sbjct: 64 FTCLQMVKLVQEEGLQLDVVSEGELYTALSAGFDPKQIHFHGNNKTKREIQYGLENGIGY 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IH 179 F V++ E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I Sbjct: 124 FVVDALEEIELIDKYA---SDTVNVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKYGLAL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + + G+ H+GSQI+ E+ + K++ + + ++ +++GGG Sbjct: 181 EAINKIKASKHLYLKGIHFHVGSQIEGTEAMIETAKIVLNWLSE---QQIQVELLNLGGG 237 Query: 240 LGIAYHSDHRPPSS-------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y + I + +I +EPGR +V + GI + +V + Sbjct: 238 FGIKYVEGDTSFPIEEGIAEITTAIKDITKELNYSVPEIGIEPGRSIVGEAGITLYEVGT 297 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK +D M+D +R LYDA +E + + I G +CE+GD I Sbjct: 298 IKDIPGVNKYVSIDGGMSDHIRTALYDAQYEALLVNRH--ESADETVTISGKLCESGDII 355 Query: 352 ALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 N K+ GD+L I TGAY S YN + + + R + ++L Sbjct: 356 IRNAKLPSSVHRGDILAILSTGAYHYSMSSNYNQMQKPSVFFLKDGKAREVIKRQSLRQL 415 Query: 411 IELDS 415 I D+ Sbjct: 416 IINDT 420 >gi|160897263|ref|YP_001562845.1| diaminopimelate decarboxylase [Delftia acidovorans SPH-1] gi|160362847|gb|ABX34460.1| diaminopimelate decarboxylase [Delftia acidovorans SPH-1] Length = 431 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 117/403 (29%), Positives = 181/403 (44%), Gaps = 22/403 (5%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA TP + Y I AFD + +A KA SN +++ + G +D Sbjct: 22 ALADQHGTPLWVYDAATIRARIAQLK-AFD----TIRFAQKACSNIHILRLMREQGVKVD 76 Query: 80 IVSEGELRRALAAPVPAER--IVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 VS GE+ RALAA A + S + T D +D A + + V + + + Sbjct: 77 AVSRGEILRALAAGYAAGHGDDLHSDIVFTADVMDEATLACVAEHKVPVNAGSIDMLHQL 136 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 P+ R+NP K +TG + K GI + + A G+K++G+ Sbjct: 137 AQASPGHPVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSDLLAALQ-AIRDGGLKLAGLH 195 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY- 256 MHIGS + + + +L + R GH++Q I GGGL I Y ++ Y Sbjct: 196 MHIGSGV-DYGHLQQVCGAMVELVRATRQAGHDLQAISAGGGLSIPYRDGDATIDTAHYH 254 Query: 257 -----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 A + + +EPGRFLVA+ G+L+ +V + K + FV++D N+ Sbjct: 255 GLWDAARKDAEAIVGHALGLEIEPGRFLVAESGVLLGQVRATKNAGSNHFVLVDTGFNEL 314 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGD 364 MRP++Y ++H + + A + GP+CE+GD R +A GD Sbjct: 315 MRPSMYGSWHGMEVLRRDGQAMPLRDAVVAGPLCESGDVFTQGDGGVVLPRALAGASVGD 374 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 LL I TGAYG+ S YN+R L E++V+G +IR R T Sbjct: 375 LLVIHDTGAYGSSMSSNYNTRPLAAEVLVDGDSTRLIRRRQTV 417 >gi|206575861|ref|YP_002236734.1| diaminopimelate decarboxylase [Klebsiella pneumoniae 342] gi|288933701|ref|YP_003437760.1| diaminopimelate decarboxylase [Klebsiella variicola At-22] gi|290511219|ref|ZP_06550588.1| diaminopimelate decarboxylase [Klebsiella sp. 1_1_55] gi|206564919|gb|ACI06695.1| diaminopimelate decarboxylase [Klebsiella pneumoniae 342] gi|288888430|gb|ADC56748.1| diaminopimelate decarboxylase [Klebsiella variicola At-22] gi|289776212|gb|EFD84211.1| diaminopimelate decarboxylase [Klebsiella sp. 1_1_55] Length = 420 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 123/433 (28%), Positives = 193/433 (44%), Gaps = 30/433 (6%) Query: 1 MSAFKY-FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M Y + L A+N L +L P + Y I + S FD +V +A Sbjct: 1 MPHSLYATDTDLTADN--LLRLPAEFGCPVWVYDAQIIRRQIAQLSQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA ++ + T D ID A + Sbjct: 54 KACSNIHILRLMREQGVKVDSVSLGEIERALAAGYDPQQN-PEDIVFTADLIDDATLDRV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 + + + + + + RVNP +K +TG + K GI + Sbjct: 113 KALQIPVNAGSIDMLSQLGEVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ + + I I + ++ + +Q+ G ++Q I GGG Sbjct: 173 -----AALEVMRRYQLQLVGIHMHIGSGVDYGHLEQVCGAMVRQVVDFGQDLQAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I Y ++ Y L ++ K+ +EPGRFLVA+ G+LV++V S+ Sbjct: 228 LSIPYREGEEAIDTAHYYGLWNRAREQIAAHLGHPVKLEIEPGRFLVAESGVLVSQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + D + + GP+CE+GD Sbjct: 288 KEMGSRHFVLIDAGFNDLMRPAMYGSYHHITALAADGRDLSAAPQVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + PGD L + TGAYGA S YNSR L+PE++ +G + +IR Sbjct: 348 FTQQEGGKVETRLLPAVVPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDGGKARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T QEL+ L+ I Sbjct: 408 RQTIQELLALELI 420 >gi|16766315|ref|NP_461930.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994067|ref|ZP_02575159.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16421563|gb|AAL21889.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205328000|gb|EDZ14764.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261248147|emb|CBG25983.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995162|gb|ACY90047.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159571|emb|CBW19090.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914032|dbj|BAJ38006.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225691|gb|EFX50745.1| Diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323131370|gb|ADX18800.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989881|gb|AEF08864.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 420 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 125/433 (28%), Positives = 192/433 (44%), Gaps = 30/433 (6%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + LG +D VS GE+ RALAA + + T D ID A + + Sbjct: 54 KACSNIHILRLMRALGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++ + + + + + RVNP +K +TG + K GI + Sbjct: 113 SELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ K + I I + ++ + +Q+ G +++ I GGG Sbjct: 173 -----AALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I Y P + Y L + K+ +EPGRFLVA G+LVT+V S+ Sbjct: 228 LSIPYREGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 288 KQMGSRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR Sbjct: 348 FTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T +EL+ L+ + Sbjct: 408 RQTIEELLALEML 420 >gi|222106726|ref|YP_002547517.1| diaminopimelate decarboxylase [Agrobacterium vitis S4] gi|221737905|gb|ACM38801.1| diaminopimelate decarboxylase [Agrobacterium vitis S4] Length = 416 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 104/416 (25%), Positives = 174/416 (41%), Gaps = 28/416 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y I ++FD ++ +A KA SN +++ + G Sbjct: 9 LTTLAQTYGTPVWVYDADTIRARIAQL-SSFD----VIRFAQKACSNTHILRQMREAGVV 63 Query: 78 LDIVSEGELRRALAAPV-PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D V+ GE+ RA A + + + T D D + + +E + + + Sbjct: 64 VDAVTLGEIERARRAGYVTGQASGVAEIVFTADVFDRSTLDRVVADKIEVNAGSIDMLHQ 123 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + R+NP K +TG + K GI Q+ A + S Sbjct: 124 LGARSPGHRVWLRINPGFGHGHSNKTNTGGENSKHGIWFEQLQEALAAVR-----RYSLT 178 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + I + ++ + G +I+ I GGGL I Y + Y Sbjct: 179 LVGLHMHIGSGVDYRHLQRVCGAMVTFCCELGADIEAISAGGGLSIPYKDGEEEIDTVHY 238 Query: 257 ASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 +L + ++ +EPGRFL AD G+L+ +V + K F+++D +D Sbjct: 239 FALWDSARKQIEEYLRHKIRLEIEPGRFLTADSGVLLAEVRATKTMGSNHFILVDAGFSD 298 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLH----IHADIVGPICETGDFIA-------LNRKIAL 359 RP +Y +YH I+ + P H + + GP+CE+GD R + Sbjct: 299 LARPAMYGSYHGISVLPAPNNSAPHSDVPVPTVVAGPLCESGDVFTQGEFGTIEKRDLPQ 358 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 +PGD + TGAYGA S YNSRL PE+++ G +IR R T +L+ L++ Sbjct: 359 AQPGDYMVFHDTGAYGASMSSNYNSRLYAPEVLIEGDNHRLIRRRQTLDDLLALET 414 >gi|86742407|ref|YP_482807.1| diaminopimelate decarboxylase [Frankia sp. CcI3] gi|86569269|gb|ABD13078.1| diaminopimelate decarboxylase [Frankia sp. CcI3] Length = 486 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 120/424 (28%), Positives = 194/424 (45%), Gaps = 16/424 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G L + + +LA TP + + + V YA KA + + Sbjct: 44 DGVLRIGGIRVNELAAEFGTPAFVLDEAD--FRARCAAWRRAFAECDVYYAGKAFLCRTI 101 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G LD+ + GEL A + PA+R++F G K++ E+ A+ G+ V+S Sbjct: 102 ARWVDEGGLNLDVCTGGELAVARSVGFPADRLLFHGNNKSVAELRAAVGYGVGRIVVDSF 161 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI---HQIHSLYAY 184 +E+ L A G + + RV P + A+TH +STG+++ KFG + ++ Sbjct: 162 AEITRLAAVAAEAGVRQRVLIRVTPGVEAHTHHYVSTGQEDQKFGFSLAGGSAAEAVERV 221 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIA 243 + +++ G+ HIGSQI F A L L ++R + +D+GGGLGIA Sbjct: 222 LAAAGSLELVGLHAHIGSQIFDTAGFGLAAHRLVGLLARIRDTHDLELPELDLGGGLGIA 281 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS 296 Y + P +D A + G ++ +EPGR +V + + +V ++K+ Sbjct: 282 YTGEDAPLEVTDVAERLTAVVGKECAAAGLTVPRLAVEPGRAIVGSTTVTLYEVGTVKEL 341 Query: 297 AD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +TFV +D M+D +R LYDA + + H+ IVG CE+GD +A + Sbjct: 342 PGLRTFVSVDGGMSDNIRTALYDARYTARLVSRTGLATTHV-VTIVGRHCESGDVVAHDV 400 Query: 356 KIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + RPGDLL I +GAY + YN P I V II R T +L+ LD Sbjct: 401 PLPDDVRPGDLLAIPASGAYHRSMASNYNHVARPPVIAVRDGAARIIVRRETEDDLLRLD 460 Query: 415 SIPA 418 P Sbjct: 461 VDPG 464 >gi|167550108|ref|ZP_02343865.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168242786|ref|ZP_02667718.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450314|ref|YP_002046984.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194408618|gb|ACF68837.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205324678|gb|EDZ12517.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205338125|gb|EDZ24889.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 420 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 121/427 (28%), Positives = 189/427 (44%), Gaps = 29/427 (6%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 Y E L+AEN L +L P + Y I + FD +V +A KA SN Sbjct: 7 YAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQKACSNI 59 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ + G +D VS GE+ RALAA + + T D ID A + + ++ Sbjct: 60 HILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARVSELHIP 118 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + + + + + RVNP +K +TG + K GI + A Sbjct: 119 VNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP-----A 173 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + K + I I + ++ + +Q+ G +++ I GGGL I Y Sbjct: 174 ALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGGLSIPYR 233 Query: 246 SDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 P + Y L + K+ +EPGR+LVA G+LVT+V S+K+ + Sbjct: 234 EGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRYLVAQSGVLVTQVRSVKQMGSR 293 Query: 300 TFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-- 354 FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 294 HFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDVFTQQEG 353 Query: 355 -----RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR R T +E Sbjct: 354 GMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEE 413 Query: 410 LIELDSI 416 L+ L+ + Sbjct: 414 LLALEML 420 >gi|16761791|ref|NP_457408.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143275|ref|NP_806617.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213163566|ref|ZP_03349276.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425813|ref|ZP_03358563.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213865437|ref|ZP_03387556.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25290925|pir||AG0867 diaminopimelate decarboxylase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504093|emb|CAD02839.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi] gi|29138909|gb|AAO70477.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 420 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 124/433 (28%), Positives = 192/433 (44%), Gaps = 30/433 (6%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 54 KACSNIHILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++ + + + + + RVNP +K +TG + K GI + Sbjct: 113 SELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ K + I I + ++ + +Q+ G +++ I GGG Sbjct: 173 -----AALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I YH P + Y L + K+ +EPGR+LVA G+LVT+V S+ Sbjct: 228 LSIPYHEGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRYLVAQSGVLVTQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 288 KQMGSRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR Sbjct: 348 FTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T +EL+ L+ + Sbjct: 408 RQTIEELLALEML 420 >gi|284164081|ref|YP_003402360.1| diaminopimelate decarboxylase [Haloterrigena turkmenica DSM 5511] gi|284013736|gb|ADB59687.1| diaminopimelate decarboxylase [Haloterrigena turkmenica DSM 5511] Length = 466 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 115/421 (27%), Positives = 190/421 (45%), Gaps = 25/421 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 LE L +P Y + +NY ++AF D + YA+KAN+ V++TL G+ Sbjct: 20 RLESLVGDYGSPLYALDLERVRENYRRLASAFP--DAEIMYAVKANALDEVLETLHEEGA 77 Query: 77 GLDIVSEGELRRALAAPVPAERI-------VFSGVGKTIDEIDLALQSGIYCFNVESESE 129 GL+ S GE++RALAA ++R ++ V ++D + + + Sbjct: 78 GLECASAGEVKRALAAIESSDRSDGSGADVHYTAVNPPARDLDWVVDAWEDHPELTITVG 137 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + R G + RVNP I+A H+K+ TG KFG+PI + + A+ Sbjct: 138 AEDTIDRLEERGYDGRLCLRVNPGIDAGHHEKVKTGAAA-KFGVPIERAVDVLTNAADRG 196 Query: 190 GVKISGVDMHIGSQIDQIESFHKAF--KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 + H+AF ++ T + +++ +DVGGG G+ Y Sbjct: 197 FDVVGVHAHVGSGVSSDQLDDHRAFVARMGELATDVDEALEGDLEFVDVGGGFGVPYRES 256 Query: 248 HRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 P A + G++ ++ +EPGR+ VAD G+L+T+V +IK++ D V +D Sbjct: 257 EAPLDLEAVAEATREALGDVDARLTIEPGRYFVADAGVLLTEVNTIKEARDTLAVGVDAG 316 Query: 308 MNDFMRPTLYDAYHEINY-------------IVNPAGDRLHIHADIVGPICETGDFIALN 354 M +RP +YDAYH I + R + I GPICE+GD + Sbjct: 317 MTTLLRPAMYDAYHPIRNLTADREADSSDETRNSADTGRETVPQTIAGPICESGDVFCSD 376 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R++ R D+L I GAYG + YNSR ++++G + R R T ++ + Sbjct: 377 RELPASRRTDVLAIGNAGAYGYEMANQYNSRPRPASVVIDGDDVRLARRRETVDDVTRPE 436 Query: 415 S 415 + Sbjct: 437 T 437 >gi|168261830|ref|ZP_02683803.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349003|gb|EDZ35634.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 420 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 125/433 (28%), Positives = 191/433 (44%), Gaps = 30/433 (6%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + LG +D VS GE+ RALAA + + T D ID A + + Sbjct: 54 KACSNIHILRLMRALGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++ + + + + + RVNP +K +TG + K GI + Sbjct: 113 SELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ K + I I + ++ + +Q+ G ++ I GGG Sbjct: 173 -----AALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDLDAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I Y P + Y L + K+ +EPGRFLVA G+LVT+V S+ Sbjct: 228 LSIPYREGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 288 KQMGSRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR Sbjct: 348 FTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T +EL+ L+ + Sbjct: 408 RQTIEELLALEML 420 >gi|57866856|ref|YP_188548.1| diaminopimelate decarboxylase [Staphylococcus epidermidis RP62A] gi|242242677|ref|ZP_04797122.1| diaminopimelate decarboxylase [Staphylococcus epidermidis W23144] gi|57637514|gb|AAW54302.1| diaminopimelate decarboxylase [Staphylococcus epidermidis RP62A] gi|242233813|gb|EES36125.1| diaminopimelate decarboxylase [Staphylococcus epidermidis W23144] Length = 421 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 116/421 (27%), Positives = 186/421 (44%), Gaps = 21/421 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 G L SL+ +A TP Y I + AF+ + YA KA + Sbjct: 8 NGELTMGGTSLKTIAQSFGTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCI 67 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 ++K + LD+VSEGEL AL A ++RI F G KT EI AL + I F V+ Sbjct: 68 QMVKLIDEENLQLDVVSEGELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVD 127 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + E+ +++ A S + RVNP + A+TH+ I TG+++ KFG+ I +L A Sbjct: 128 TLEEIDLIDKYADSNV---DVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVN 184 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +++ G+ HIGSQI+ E+ K K++ + R + +++GGG GI Sbjct: 185 KVKATKHLQLKGIHFHIGSQIEGTEAMIKTAKIVLNWLASER---IEVSLLNIGGGFGIK 241 Query: 244 YHSDHRPPSSSD-------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y Q +I +EPGR +V + GI + +V +IK Sbjct: 242 YVEGDESFPIEQGISEITEAIKETAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDI 301 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M+D +R LY A +E + ++ + I G +CE+GD I + Sbjct: 302 PGVNKYVSVDGGMSDHIRTALYGAQYEALLVNR--NEKANESVTIAGKLCESGDIIVRDA 359 Query: 356 KIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ GD L + TGAY + YN + + + R + ++LI D Sbjct: 360 QLPSSVHRGDYLAVLSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIND 419 Query: 415 S 415 + Sbjct: 420 T 420 >gi|238792795|ref|ZP_04636426.1| Diaminopimelate decarboxylase [Yersinia intermedia ATCC 29909] gi|238727903|gb|EEQ19426.1| Diaminopimelate decarboxylase [Yersinia intermedia ATCC 29909] Length = 420 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 174/416 (41%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + N FD ++ +A KA SN +++ + G Sbjct: 16 NLMALPERFGCPVWAYDGEIIAQRINQLRN-FD----VIRFAQKACSNIHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RA+ A + + T D +D A + N+ + + + Sbjct: 71 KVDSVSLGEIERAIHAGFQP-GQEPAEIVFTADLLDQATLLRVTELNIPVNAGSIDMLDQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ R+NP +K +TG + K GI + K Sbjct: 130 LGQHAPGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWHQDLPQAIE-----KVKKYGLT 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + I + ++ + QQ+ + G +I I GGGL I Y + Y Sbjct: 185 LVGVHMHIGSGVDYQHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHY 244 Query: 257 ASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L ++ + +EPGRFLVA+ G+LV +V ++K + +V++D ND Sbjct: 245 YGLWNKAREQIAAHLGHPVSLEIEPGRFLVAESGVLVAQVRAVKDMGRRHYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH I I + GP+CE+GD R + Sbjct: 305 LMRPAMYGSYHHISLLPADGRDLTSAPLIDTVVGGPLCESGDVFTQEAGGGLETRALPAA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L TGAYGA S YNSR L+PE++ Q +IR R T +ELI L+ I Sbjct: 365 KIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIALEQI 420 >gi|134301078|ref|YP_001114574.1| Orn/DAP/Arg decarboxylase 2 [Desulfotomaculum reducens MI-1] gi|134053778|gb|ABO51749.1| diaminopimelate decarboxylase [Desulfotomaculum reducens MI-1] Length = 421 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 96/416 (23%), Positives = 153/416 (36%), Gaps = 15/416 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N AF +A+KA N A++ L G Sbjct: 11 LKEITEQYPTPFHLYDERGIRENARRLKKAFQWNKGFKEYFAVKATPNPAILNILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A A E I+FS ++ A + + + ++ ++ Sbjct: 71 GADCSSLTELMLAEAVGFAGEEIMFSSNVTPAEDFICANK----LQAIINFDDITHIDFF 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP + I E K+G+ Q+ Sbjct: 127 KQIAEMPETISLRYNPGGDFKISNAIMDKPGEAKYGLTRSQLTEAIKKLQLYGVKHFGLH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + A L + + G +I I++ GG+GI Y + +P Sbjct: 187 AFLASNTTTNEYYPELAKILFKTAVELNDETGAHISFINLSGGVGIPYQPEQQPADIMAI 246 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + I E GRF++ G LV + K K ++ LD Sbjct: 247 GEGVKQAYAEVLLPAGMDDVAIYTELGRFMLGPYGCLVATALHEKHI-HKDYIGLDACAA 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y +YH I + H DI G +CE D A++R + GDLL I Sbjct: 306 NLMRPAMYGSYHHITVMGKENQPCDH-KYDITGGLCENNDKFAIDRMLPKIDIGDLLVIH 364 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIELDSIPAWLQKTP 424 TGA+G YN +L EI++ +IR T + +I + + T Sbjct: 365 DTGAHGFAMGYNYNGKLRSAEILLKEDGSTQLIRRAETPADYFATLNITDYFKSTR 420 >gi|168820255|ref|ZP_02832255.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|200388738|ref|ZP_03215350.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207858276|ref|YP_002244927.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|199605836|gb|EDZ04381.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205342949|gb|EDZ29713.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206710079|emb|CAR34434.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320087440|emb|CBY97205.1| Diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 420 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 122/427 (28%), Positives = 189/427 (44%), Gaps = 29/427 (6%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 Y E L+AEN L +L P + Y I + FD +V +A KA SN Sbjct: 7 YAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQKACSNI 59 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ + G +D VS GE+ RALAA + + T D ID A + + ++ Sbjct: 60 HILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARVSELHIP 118 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + + + + + RVNP +K +TG + K GI + A Sbjct: 119 VNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP-----A 173 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + K + I I + ++ + +Q+ G +++ I GGGL I Y Sbjct: 174 ALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGGLSIPYR 233 Query: 246 SDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 P + Y L + K+ +EPGRFLVA G+LVT+V S+K+ + Sbjct: 234 EGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSR 293 Query: 300 TFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-- 354 FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 294 HFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDVFTQQEG 353 Query: 355 -----RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR R T +E Sbjct: 354 GMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEE 413 Query: 410 LIELDSI 416 L+ L+ + Sbjct: 414 LLALEML 420 >gi|270264865|ref|ZP_06193129.1| hypothetical protein SOD_j00800 [Serratia odorifera 4Rx13] gi|270041163|gb|EFA14263.1| hypothetical protein SOD_j00800 [Serratia odorifera 4Rx13] Length = 420 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 116/410 (28%), Positives = 179/410 (43%), Gaps = 27/410 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 P + Y I + FD ++ +A KA SN +++ + G +D VS Sbjct: 22 QRFGCPVWAYDAAIISERISQLR-HFD----VIRFAQKACSNIHILRLMREQGVKVDSVS 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GE+ RAL A S + T D +D A + + + + + + Sbjct: 77 LGEIERALQAGFQPGGE-PSDIVFTADVLDHATLARVSELKIPVNVGSIDMLDQLGQVSV 135 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 P+ R+NP +K +TG + K GI + K+ GV MHIGS Sbjct: 136 GHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQAVEKIQQYGL-KLIGVHMHIGS 194 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + ++ + QQ+ GH+I I GGGL I Y + Y L + Sbjct: 195 GV----DYQHLERVCDAMVQQVIDLGHDISAISAGGGLSIPYQYGEEAIDTEHYFGLWNS 250 Query: 263 Y------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + +EPGRFL+A+ G+LV +V ++K + FV++D ND MRP + Sbjct: 251 ARERIAAHLGHPVSLEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLVDAGFNDLMRPAM 310 Query: 317 YDAYHEINYIVNPAGDRLHIH---ADIVGPICETGDFIALN-------RKIALPRPGDLL 366 Y +YH I+ + + H I GP+CE+GD R++ + GD L Sbjct: 311 YGSYHHISLLPADGRNTEHQPLRDTVIAGPLCESGDVFTQQAGGGIETRELPPVQVGDYL 370 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 TGAYGA S YNSR L+PE++ + +IR R T +ELI L+ I Sbjct: 371 VFHDTGAYGASMSSNYNSRPLLPEVLFEKGEPRLIRRRQTIEELIALELI 420 >gi|326629067|gb|EGE35410.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 420 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 122/427 (28%), Positives = 190/427 (44%), Gaps = 29/427 (6%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 Y E L+AEN L +L P + Y I + FD +V +A KA SN Sbjct: 7 YAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQKACSNI 59 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ + G +D VS GE+ RALAA + + T D ID A + + ++ Sbjct: 60 HILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARVSELHIP 118 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + + + + + RVNP +K +TG + K GI + A Sbjct: 119 VNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP-----A 173 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + K + I I + ++ + +Q+ G +++ I GGGL I+Y Sbjct: 174 ALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGGLSISYR 233 Query: 246 SDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 P + Y L + K+ +EPGRFLVA G+LVT+V S+K+ + Sbjct: 234 EGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSR 293 Query: 300 TFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-- 354 FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 294 HFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDVFTQQEG 353 Query: 355 -----RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR R T +E Sbjct: 354 GMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEE 413 Query: 410 LIELDSI 416 L+ L+ + Sbjct: 414 LLALEML 420 >gi|238751492|ref|ZP_04612984.1| Diaminopimelate decarboxylase [Yersinia rohdei ATCC 43380] gi|238710359|gb|EEQ02585.1| Diaminopimelate decarboxylase [Yersinia rohdei ATCC 43380] Length = 420 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 108/416 (25%), Positives = 170/416 (40%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + N FD ++ +A KA SN +++ + G Sbjct: 16 NLIALPERFGCPVWAYDGDIITRKINQLRN-FD----VIRFAQKACSNIHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + + T D +D + N+ + + + Sbjct: 71 KVDSVSLGEIERALHAGFQP-GQEPAEIVFTADLLDQPTLLRVTELNIPVNAGSIDMLDQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI + Sbjct: 130 LGQHAPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPHAINKVKQYG-----LT 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I I + ++ + +Q+ G +I I GGGL I Y + Y Sbjct: 185 LVGIHMHIGSGVDYQHLEQVCAAMVKQVIDLGQDISAISAGGGLSIPYQFGDDEIDTEHY 244 Query: 257 ASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + +EPGRFLVA+ G+L+ +V ++K+ + +V++D ND Sbjct: 245 YGLWNHAREQIAAHLGHPVSLEIEPGRFLVAESGVLIAQVRAVKEMGSRHYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH I I + GP+CE+GD R + Sbjct: 305 LMRPAMYGSYHHISLLPADGRSLVAEPLIETVVAGPLCESGDVFTQEAGGGLETRALPAA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD + TGAYGA S YNSR L+PE++ Q +IR R T +ELI L+ Sbjct: 365 KIGDYVVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIALEQF 420 >gi|268593090|ref|ZP_06127311.1| diaminopimelate decarboxylase [Providencia rettgeri DSM 1131] gi|291311359|gb|EFE51812.1| diaminopimelate decarboxylase [Providencia rettgeri DSM 1131] Length = 419 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 105/413 (25%), Positives = 170/413 (41%), Gaps = 27/413 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L L +P + Y + I + FD V +A KA SN +++ + G Sbjct: 17 LRALPEQYGSPVWVYDSAVIIERIKQLQ-VFD----TVRFAQKACSNIHILRLMKQQGVK 71 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ RAL A R S + T D +D A + + ++ + + ++ Sbjct: 72 VDSVSLGEIERALVAGFQPGRE-NSEIVFTADVLDRATLAKVTELDIPVNAGSIDMLEQI 130 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 P+ R+NP +K +TG + K GI + + Sbjct: 131 GEQKAGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWHEDLSLALEKIRHY-----NLSL 185 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + I I + + + + + G ++ I GGGL Y Y Sbjct: 186 VGIHMHIGSGVDYQHLADVCDSMVALVTTAGVDLHAISAGGGLSTPYREGDELIDVQHYY 245 Query: 258 SLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 SL + ++ +EPGR+LVA+ G+L+ +V ++K + +V++D ND Sbjct: 246 SLWDNARQRIEQHLGHKIELEIEPGRYLVAESGVLLAEVRAVKDMGSRHYVLVDSGFNDL 305 Query: 312 MRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIAL-------NRKIALPR 361 MRP +Y +YH I + GP+CE+GD R + + Sbjct: 306 MRPAMYGSYHHISVLPTDGRNVDGAQLKDTIVAGPLCESGDVFTQLEGGLVVTRALPEVK 365 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GD L TGAYGA S YNSR L+PE+M + +IR R T +EL+ L+ Sbjct: 366 VGDFLVFHDTGAYGASMSSNYNSRPLLPEVMFVNGKPQLIRRRQTIEELLALE 418 >gi|295097387|emb|CBK86477.1| diaminopimelate decarboxylase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 430 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 117/416 (28%), Positives = 190/416 (45%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L +L P + Y + + FD +V +A KA SN +++ + G Sbjct: 26 NLLRLPAEFGCPVWVYDAQIVREKIAALHQ-FD----VVRFAQKACSNIHILRLMREQGV 80 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RALAA + + T D ID A + ++ + + + ++ Sbjct: 81 KVDSVSLGEIERALAAGFDP-KADSDAIVFTADLIDDATLARVHELQIPVNAGSVDMLEQ 139 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + R+NP +K +TG + K GI + + +K+ G+ Sbjct: 140 LGQVSPGHRVWLRINPGFGHGHSQKTNTGGENSKHGIWYADMPAALEVLQRY-NLKLVGI 198 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + ++ + +Q+ G +++ I GGGL I Y + Y Sbjct: 199 HMHIGSGV----DYGHLEQVCGAMVRQVIDFGQDLEAISAGGGLSIPYREGEEAIDTDHY 254 Query: 257 ------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 A K+ +EPGRFLVA+ G+LV +V S+K+ + FV++D ND Sbjct: 255 YGLWSAARDSIAAHLGHAVKLEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFND 314 Query: 311 FMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP++Y +YH I + D I + GP+CE+GD R + Sbjct: 315 LMRPSMYGSYHHITALAADGRDLVNAPRIETVVAGPLCESGDVFTQQEGGKVETRSLPEV 374 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +PGD L + TGAYGA S YNSR L+PE++ + +IR R T QEL+ L+ + Sbjct: 375 KPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGVARLIRRRQTIQELLALELV 430 >gi|195940484|ref|ZP_03085866.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4024] Length = 420 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 117/416 (28%), Positives = 190/416 (45%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L +L P + Y + + FD +V +A KA SN +++ + G Sbjct: 16 NLLRLPAEFGCPVWVYDAQIVREKIAALHQ-FD----VVRFAQKACSNIHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RALAA + + T D ID A + ++ + + + ++ Sbjct: 71 KVDSVSLGEIERALAAGFDP-KADSDAIVFTADLIDDATLARVHELQIPVNAGSVDMLEQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + R+NP +K +TG + K GI + + +K+ G+ Sbjct: 130 LGQVSPGHRVWLRINPGFGHGHSQKTNTGGENSKHGIWYADMPAALEVLQRY-NLKLVGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + ++ + +Q+ G +++ I GGGL I Y + Y Sbjct: 189 HMHIGSGV----DYGHLEQVCGAMVRQVIDFGQDLEAISAGGGLSIPYREGEEAIDTDHY 244 Query: 257 ------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 A K+ +EPGRFLVA+ G+LV +V S+K+ + FV++D ND Sbjct: 245 YGLWSAARDSIAAHLGHAVKLEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFND 304 Query: 311 FMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP++Y +YH I + D I + GP+CE+GD R + Sbjct: 305 LMRPSMYGSYHHITALAADGRDLLNAPRIETVVAGPLCESGDVFTQQEGGKVETRSLPEV 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +PGD L + TGAYGA S YNSR L+PE++ + +IR R T QEL+ L+ + Sbjct: 365 KPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGVARLIRRRQTIQELLALELV 420 >gi|307128625|ref|YP_003880655.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri CARI] gi|306483087|gb|ADM89957.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri CARI] Length = 402 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 123/406 (30%), Positives = 190/406 (46%), Gaps = 20/406 (4%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAH 73 N+ L + TP Y Y IE Y +F + + + YA KAN+N +++K L Sbjct: 4 NIYLHNITKKYGTPLYVYDANKIEYQYKLIKQSFSYIENLKINYACKANTNISILKFLKK 63 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 LGSGLD VS E+ L A + I+++ ++ EI A+++G+ L Sbjct: 64 LGSGLDTVSIQEIEIGLKAGFKPKEIIYTPNSVSLSEIKKAIKAGVRINIDNLS-----L 118 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 ++ + PI R+NP I +KKIS G + KFGI +Q+ + K+ Sbjct: 119 LEQIGNDNPNYPIGIRINPHILGGGNKKISVGHIDSKFGISYYQLPHIKKIVENTGI-KV 177 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G+ MH GS I I F + +L ++ S + +++ID G G + Y + Sbjct: 178 EGIHMHTGSDILDIGVFLQGADILLNV----ASFFNELKYIDFGSGFKVPYKKNDTKTDI 233 Query: 254 SDYASLIH------QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + + K+ EPG+FLV++ G + KV IK + F +D Sbjct: 234 DMLGVSLKRKFLFFCEKYCKKLKLFFEPGKFLVSESGSFLVKVNVIKHTTSTVFAGVDSG 293 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 N F+RP YD+YH I+ I NP+G + +VG ICE+ D +NRKI R GDLL Sbjct: 294 FNHFIRPMFYDSYHHIDNISNPSG--ILRFYTVVGYICES-DTFCVNRKINEIREGDLLC 350 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 GAY S YNSR E+++ ++ +IR R Q+L+ Sbjct: 351 FRNAGAYCFSMSSNYNSRYRPSEVIIYNNKDFLIRKRENLQDLLNN 396 >gi|242373699|ref|ZP_04819273.1| diaminopimelate decarboxylase [Staphylococcus epidermidis M23864:W1] gi|242348667|gb|EES40269.1| diaminopimelate decarboxylase [Staphylococcus epidermidis M23864:W1] Length = 421 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 122/425 (28%), Positives = 195/425 (45%), Gaps = 22/425 (5%) Query: 5 KYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKA 61 +Y + G L E SL+ +A TP Y I + AF + YA KA Sbjct: 4 EYNDYGELTMEGTSLKTVAQSFGTPTIVYDEDQIRTQMRRYHEAFKKSGLKYNISYASKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + ++K + LD+VSEGEL AL A A RI F G KT EI AL++GI Sbjct: 64 FTCIQMVKLVQEEDLQLDVVSEGELYTALEAGFDASRIHFHGNNKTKREIQYALENGIGY 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 F +++ E+ +++ A + RVNP + A+TH+ I TG+++ KFG+ I +L Sbjct: 124 FVIDALEEIDLIDKYA---SNDVNVVIRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLAL 180 Query: 182 YA--YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A T +++ GV HIGSQI+ E+ + K++ + N + +++GGG Sbjct: 181 EAVNKVKTSKHLQLKGVHFHIGSQIEGTEAMIETAKIVLNWL---SDNDIQVDLLNLGGG 237 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYF-------GNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y + + + I +I +EPGR +V + GI + +V + Sbjct: 238 FGIKYVEEDVSFPIEEGIAEITDAIKETVQSLNYELPEIGIEPGRSIVGEAGITLYEVGT 297 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK+ + +D M+D +R LYDA ++ + + I G +CE+GD I Sbjct: 298 IKEIPEVNKYVSVDGGMSDHIRTALYDAKYQALLVNRH--EEADDTVTIAGKLCESGDII 355 Query: 352 ALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 N K+ + GD L I TGAY + YN + + + R + ++L Sbjct: 356 IKNAKLPSSVQRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQL 415 Query: 411 IELDS 415 I D+ Sbjct: 416 IINDT 420 >gi|157364120|ref|YP_001470887.1| diaminopimelate decarboxylase [Thermotoga lettingae TMO] gi|157314724|gb|ABV33823.1| diaminopimelate decarboxylase [Thermotoga lettingae TMO] Length = 382 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 126/381 (33%), Positives = 198/381 (51%), Gaps = 8/381 (2%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L++ A + TP Y Y I K + + F +D + YA+KAN N+ ++KTL + G Sbjct: 6 LKQAADIYGTPLYVYDLPFIIKRITSLKDLFFDLDFRIAYAMKANFNRDLLKTLNNFGLM 65 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D+VS GE A + +RI+ +G K +D++ + +G++ N++S EL L + Sbjct: 66 IDVVSYGEYLHARSIGFAPDRIIVNGNCKKVDQLKTYVNNGVFSINLDSYEELLRLEKII 125 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 S I+ RVNPD++A TH ISTG KE+KFG+ ++ +K+ G Sbjct: 126 DSQT---NISIRVNPDVDAKTHPHISTGLKENKFGVDFDTAAAMIRRIEKNKYLKLIGFH 182 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 HIGSQI +I+ + +A L D ++ G I+ +++GGG GI Y ++Y Sbjct: 183 CHIGSQITEIQPYLEAITSLIDFIEK---TGIEIEILNLGGGWGIDYGDGKF-LDLNEYR 238 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + I +I E GR++ A G L++KV +KK+ K FV++D M +RP LY Sbjct: 239 NKILPLLKKTMKTVIFELGRWITAPAGYLISKVEYVKKTRYKIFVVVDTGMTHLIRPALY 298 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 A + P+ DR I ADIVGP CE+ D + K+ P G+L+ I GAYG Sbjct: 299 GAK-HKIIPLYPSNDRKMIVADIVGPACESSDVLRKEYKLPEPAEGELITICDVGAYGFA 357 Query: 378 QSGTYNSRLLIPEIMVNGSQF 398 + YN E++ +G +F Sbjct: 358 MASEYNLIPKPIEVIWDGEKF 378 >gi|198243318|ref|YP_002216988.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937834|gb|ACH75167.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326624755|gb|EGE31100.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 420 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 124/433 (28%), Positives = 191/433 (44%), Gaps = 30/433 (6%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 54 KACSNIHILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++ + + + + + RVNP +K +TG + K GI + Sbjct: 113 SELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ K + I I + ++ + +Q+ G +++ I GGG Sbjct: 173 -----AALAIMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I Y P + Y L + K+ +EPGRFLVA G+LVT+V S+ Sbjct: 228 LSIPYREGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 288 KQMGSRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR Sbjct: 348 FTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T +EL+ L+ + Sbjct: 408 RQTIEELLALEML 420 >gi|62181522|ref|YP_217939.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224584802|ref|YP_002638600.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62129155|gb|AAX66858.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224469329|gb|ACN47159.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322716004|gb|EFZ07575.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 420 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 124/433 (28%), Positives = 191/433 (44%), Gaps = 30/433 (6%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 54 KACSNIHILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++ + + + + + RVNP +K +TG + K GI + Sbjct: 113 SELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ K + I I + ++ + +Q+ G +++ I GGG Sbjct: 173 -----AALAIMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I Y P + Y L + K+ +EPGRFLVA G+LVT+V S+ Sbjct: 228 LSIPYREGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 288 KQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRALENGPWVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR Sbjct: 348 FTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T +EL+ L+ + Sbjct: 408 RQTIEELLALEML 420 >gi|168231114|ref|ZP_02656172.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194444444|ref|YP_002042264.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194471848|ref|ZP_03077832.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197251631|ref|YP_002147923.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238909791|ref|ZP_04653628.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194403107|gb|ACF63329.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194458212|gb|EDX47051.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197215334|gb|ACH52731.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205334564|gb|EDZ21328.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 420 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 124/433 (28%), Positives = 191/433 (44%), Gaps = 30/433 (6%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 54 KACSNIHILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++ + + + + + RVNP +K +TG + K GI + Sbjct: 113 SELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ K + I I + ++ + +Q+ G +++ I GGG Sbjct: 173 -----AALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I Y P + Y L + K+ +EPGRFLVA G+LVT+V S+ Sbjct: 228 LSIPYREGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 288 KQMGSRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR Sbjct: 348 FTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T +EL+ L+ + Sbjct: 408 RQTIEELLALEML 420 >gi|283835394|ref|ZP_06355135.1| diaminopimelate decarboxylase [Citrobacter youngae ATCC 29220] gi|291068564|gb|EFE06673.1| diaminopimelate decarboxylase [Citrobacter youngae ATCC 29220] Length = 418 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 124/430 (28%), Positives = 189/430 (43%), Gaps = 31/430 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 + + L A+N L +L P + Y I S FD +V +A KA Sbjct: 4 SLNNTDTDLTADN--LLRLPAEFGCPVWVYDAQIIRAQIAKLSQ-FD----VVRFAQKAC 56 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SN +++ + G +D VS GE+ RALAA T D ID A + + Sbjct: 57 SNIHILRLMREQGVKVDSVSLGEIERALAAGYVPGNDEI---VFTADMIDNATLARVSEL 113 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 + + + ++ L + RVNP +K +TG + K GI + + Sbjct: 114 QIPVNAGSVDMLEQLGQLSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYSDLPAAL 173 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A +K+ G+ MHIGS + + ++ + +Q+ G +++ I GGGL I Sbjct: 174 AVIQRY-QLKLVGIHMHIGSGV----DYGHLEQVCGAMVRQVIEFGQDLEAISAGGGLSI 228 Query: 243 AYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y + Y L + K+ +EPGRFLVA+ G+LV +V S+K Sbjct: 229 PYREGEEAIDTDHYFGLWNAAREQIAQHLGHPVKLEIEPGRFLVAEAGVLVAQVRSVKAM 288 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + FV++D ND MRP +Y +YH I + I + GP+CE+GD Sbjct: 289 GSRHFVLIDAGFNDLMRPAMYGSYHHISALAGDGRSLENAPQIETVVAGPLCESGDVFTQ 348 Query: 354 N-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 R + PGD L + TGAYGA S YNSR L+PE++ + +IR R T Sbjct: 349 QEGGKVETRLLPAVAPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGAARLIRRRQT 408 Query: 407 FQELIELDSI 416 EL+ L+ I Sbjct: 409 IDELLALELI 418 >gi|269957250|ref|YP_003327039.1| diaminopimelate decarboxylase [Xylanimonas cellulosilytica DSM 15894] gi|269305931|gb|ACZ31481.1| diaminopimelate decarboxylase [Xylanimonas cellulosilytica DSM 15894] Length = 463 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 124/440 (28%), Positives = 183/440 (41%), Gaps = 33/440 (7%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYALKA 61 +G+L + LA TP Y F++AF G V YA KA Sbjct: 24 DGALAVGGTTTTALAAEHGTPAYVLDEGEFRLRARRFADAFGQAFEQVGTGVDVYYAGKA 83 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 +AV + G +D S GEL ALAA VP + G K+ E++ AL +G+ Sbjct: 84 LLTKAVARWAREEGLRVDTASGGELAVALAAGVPGAELGLHGNNKSDGELEAALDAGVGR 143 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V+S E+ L A + G AP+ RV ++A H+ I+T ++ KFG+ + Sbjct: 144 IIVDSLGEIDRLADLAQARGVVAPVMLRVTTGVHAGGHEFIATAHEDQKFGLSVSAGPGG 203 Query: 182 YA--------YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQ 232 P +++ G+ HIGSQI + F +A + + L L + Sbjct: 204 GDSPAVIALLRVLERPSLRLLGIHSHIGSQILDADGFAEAARTVLRLRAHLGIRTGVLVD 263 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGI 285 +D+GGG GIAY A I + + +I +EPGR +V GI Sbjct: 264 EVDLGGGYGIAYLPQDSELDPFRVAHEIARAVADACRELGTPLPRISIEPGRAIVGPAGI 323 Query: 286 LVTKV---------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI 336 V V + + +V +D M+D +RP LY A + I N D Sbjct: 324 TVYTVGTVKPVVVTSDDGGTFTRLYVSVDGGMSDNIRPALYGAAYH-AEIANRRSDAPLA 382 Query: 337 HADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 +VG CE+GD + + RPGDLL + TGAYG + YN P I V Sbjct: 383 LVRVVGKHCESGDIVVDELLLPGDVRPGDLLAVAATGAYGRSMASNYNLLTRPPVIGVLD 442 Query: 396 SQFHIIRPRMTFQELIELDS 415 ++ R T +L+ LD Sbjct: 443 GASRVLVRRETVDDLLALDQ 462 >gi|329729353|gb|EGG65759.1| diaminopimelate decarboxylase [Staphylococcus epidermidis VCU144] Length = 421 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 117/421 (27%), Positives = 188/421 (44%), Gaps = 21/421 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQ 65 G L SL+ +A TP Y I + AF+ + YA KA + Sbjct: 8 NGELTMGGTSLKTIAQSFGTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCI 67 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 ++K + LD+VSEGEL AL A ++RI F G KT EI AL + I F V+ Sbjct: 68 QMVKLIDEENLQLDVVSEGELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVD 127 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA-- 183 + E++ +++ A S + RVNP + A+TH+ I TG+++ KFG+ I +L A Sbjct: 128 TLEEIELIDKYADSNV---DVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVN 184 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +++ G+ HIGSQI+ E+ K K++ + R + +++GGG GI Sbjct: 185 KVKATKHLQLKGIHFHIGSQIEGTEAMIKTAKIVLNWLASER---IEVSLLNIGGGFGIK 241 Query: 244 YHSDHRPPSSSD-------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y Q +I +EPGR +V + GI + +V +IK Sbjct: 242 YVEGDESFPIEQGISEITEAIKETAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDI 301 Query: 297 ADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +D M+D +R LY A +E + ++ + I G +CE+GD I + Sbjct: 302 PGVNKYVSVDGGMSDHIRTALYGAQYEALLVNR--NEKANESVTIAGKLCESGDIIVRDA 359 Query: 356 KIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ GD L + TGAY + YN P + + + R + ++LI D Sbjct: 360 RLPSSVHRGDYLAVLSTGAYHYSMASNYNQMQKSPVFFLKDGKAREVIKRQSLRQLIIND 419 Query: 415 S 415 + Sbjct: 420 T 420 >gi|104782627|ref|YP_609125.1| diaminopimelate decarboxylase [Pseudomonas entomophila L48] gi|95111614|emb|CAK16335.1| diaminopimelate decarboxylase [Pseudomonas entomophila L48] Length = 409 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 112/411 (27%), Positives = 177/411 (43%), Gaps = 24/411 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L + +P + Y I + FD V +A KAN N V++ + G Sbjct: 6 LAQAVRQHGSPLWAYDAQTIHQRIDQLLQHFD----TVRFAQKANPNLHVLRLMRERGLV 61 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD VS GE+ RA AA + +GV T D +D + + +E + + ++ Sbjct: 62 LDAVSLGEMERAFAAGAAVDGE-PAGVVLTCDVLDQPTLARVVDTKIEVNAGSIDMLRQL 120 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP +K +TG + K GI Q+ A + Sbjct: 121 GERSPGHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHEQLPEALACVK-----QFGLHL 175 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + I + ++ + + G +I+ +GGGL Y SD +P YA Sbjct: 176 VGVHMHIGSGVDYQHLEQVAGAMVGLIGKLGMDIEAFSIGGGLSTPYRSDDQPVDLQRYA 235 Query: 258 SLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ +EPGR+LVA+ G LV +V ++K+ DK ++++D ND Sbjct: 236 RTWAVARAEIETMLGHSVRMEIEPGRYLVAESGYLVAEVRAVKQMGDKHYILVDAGFNDL 295 Query: 312 MRPTLYDAYHEINYIVNPAGD--RLHIHADIVGPICETGDFIALN------RKIALPRPG 363 MRP +Y AYH ++ R + GP+CE+GD N + + + G Sbjct: 296 MRPAMYGAYHRMSLFDAVGRPVSRPLQPTVVAGPLCESGDVFTQNDEELTPQDLPQAKVG 355 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 DLL I GAYGA S YNSR L+PE ++ +IR R T QEL+ L+ Sbjct: 356 DLLVIHDAGAYGASMSSNYNSRPLLPEFLIENDSLRMIRRRQTVQELLALE 406 >gi|161615953|ref|YP_001589918.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197263510|ref|ZP_03163584.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|161365317|gb|ABX69085.1| hypothetical protein SPAB_03752 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197241765|gb|EDY24385.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 420 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 124/433 (28%), Positives = 190/433 (43%), Gaps = 30/433 (6%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 54 KACSNIHILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++ + + + + + RVNP +K +TG + K GI + Sbjct: 113 SELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ K + I I + ++ + +Q+ G ++ I GGG Sbjct: 173 -----AALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDLDAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I Y P + Y L + K+ +EPGRFLVA G+LVT+V S+ Sbjct: 228 LSIPYREGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 288 KQMGSRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR Sbjct: 348 FTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T +EL+ L+ + Sbjct: 408 RQTIEELLALEML 420 >gi|256784097|ref|ZP_05522528.1| diaminopimelate decarboxylase [Streptomyces lividans TK24] gi|289767978|ref|ZP_06527356.1| diaminopimelate decarboxylase [Streptomyces lividans TK24] gi|289698177|gb|EFD65606.1| diaminopimelate decarboxylase [Streptomyces lividans TK24] Length = 440 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 110/420 (26%), Positives = 168/420 (40%), Gaps = 26/420 (6%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 + L A TP + Y I FD ++ YA KA SN +++ + Sbjct: 20 DGPRLAAAAAEHGTPLWLYDAATIRAQIDRLRR-FD----VIRYAQKACSNLHILRLMRE 74 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 G +D VSEGE+ RALAA V L + + + + Sbjct: 75 EGVHVDAVSEGEIERALAAGYRVGGDDEPIVFTADLLNRSTLLR-VVELGIPVNAGSPQM 133 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + P+ R+NP +K +TG + K GI + A + Sbjct: 134 LDQVGRAAPGHPVWIRINPGFGHGHSRKTNTGGEHSKHGIWHEHLEESLALVDRHGLDLV 193 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + I + + + +Q+R G +I+ I GGGL + Y + Sbjct: 194 -----GLHMHIGSGVDYGHLESVCETMVKQVRMAGRDIRAISAGGGLSVPYTPGDPEIDT 248 Query: 254 SDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 Y L ++ +EPGRFLVA G+L +V + K FV++D Sbjct: 249 DRYFELWDAARRELVSELGHPVRLEIEPGRFLVAGAGVLAAEVRAQKPVGSNYFVLVDAG 308 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD--IVGPICETGDFIA-------LNRKIA 358 ND MRP +Y + H ++ + R D + GP+CE+GD + Sbjct: 309 FNDLMRPAMYGSNHRVSVLDADGAPRASDARDTVLAGPLCESGDVFTQVEGGDVEPVPLP 368 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 GDL+ TGAYGA S TYNSR LIPE++V+G++ +IR R T EL+ + P Sbjct: 369 RTDVGDLVVFHDTGAYGASMSSTYNSRPLIPEVLVDGAETRLIRRRQTVAELLAPELEPG 428 >gi|330011204|ref|ZP_08307023.1| diaminopimelate decarboxylase [Klebsiella sp. MS 92-3] gi|328534258|gb|EGF60876.1| diaminopimelate decarboxylase [Klebsiella sp. MS 92-3] Length = 420 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 123/433 (28%), Positives = 193/433 (44%), Gaps = 30/433 (6%) Query: 1 MSAFKY-FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M Y + L A+N L +L P + Y I + S FD +V +A Sbjct: 1 MPHSLYATDTDLTADN--LLRLPAEFGCPVWVYDAQIIRRQIAQLSQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA ++ + T D ID A + Sbjct: 54 KACSNIHILRLMREQGVKVDSVSLGEIERALAAGYDPQQN-PEDIVFTADLIDDATLDRV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 + + + + + + RVNP +K +TG + K GI + Sbjct: 113 KALQIPVNAGSIDMLSQLGEVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ + + I I + ++ + +Q+ G ++Q I GGG Sbjct: 173 -----AALEVMRRYQLQLVGIHMHIGSGVDYGHLEQVCGAMVRQVVDFGQDLQAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I Y ++ Y L ++ K+ +EPGRFLVA+ G+LV++V S+ Sbjct: 228 LSIPYREGEEAIDTAHYYGLWNRAREQIAAHLGHPVKLEIEPGRFLVAESGVLVSQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + D + + GP+CE+GD Sbjct: 288 KEMGSRHFVLIDAGFNDLMRPAMYGSYHHITALAGDGRDLSAAPQVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + PGD L + TGAYGA S YNSR L+PE++ +G + +IR Sbjct: 348 FTQQEGGKVETRLLPAGAPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDGGKARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T QEL+ L+ I Sbjct: 408 RQTIQELLALELI 420 >gi|205353953|ref|YP_002227754.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273734|emb|CAR38727.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Length = 420 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 122/427 (28%), Positives = 190/427 (44%), Gaps = 29/427 (6%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 Y E L+AEN L +L P + Y I + FD +V +A KA SN Sbjct: 7 YAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQKACSNI 59 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ + G +D VS GE+ RALAA + + T D ID A + + ++ Sbjct: 60 HILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARVSELHIP 118 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + + + + + RVNP +K +TG + K GI + A Sbjct: 119 VNAGSVDMLTQLGQVSPGHRVWLRVNPSFGHGHSQKTNTGGENSKHGIWHSDLP-----A 173 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + K + I I + ++ + +Q+ G +++ I GGGL I+Y Sbjct: 174 ALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGGLSISYR 233 Query: 246 SDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 P + Y L + K+ +EPGRFLVA G+LVT+V S+K+ + Sbjct: 234 EGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSR 293 Query: 300 TFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-- 354 FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 294 HFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDVFTQQEG 353 Query: 355 -----RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR R T +E Sbjct: 354 GMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEE 413 Query: 410 LIELDSI 416 L+ L+ + Sbjct: 414 LLALEML 420 >gi|139437267|ref|ZP_01771427.1| Hypothetical protein COLAER_00406 [Collinsella aerofaciens ATCC 25986] gi|133776914|gb|EBA40734.1| Hypothetical protein COLAER_00406 [Collinsella aerofaciens ATCC 25986] Length = 769 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 103/440 (23%), Positives = 165/440 (37%), Gaps = 19/440 (4%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSN 64 Y + +LE + TPF+ Y I +N +AF +A+KAN N Sbjct: 9 YAAKQPFVDKETLEHIVEQFPTPFHLYDEAGIRRNMQEVRDAFAWNPGFKEYFAVKANPN 68 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 A+I L G G D S EL A + + I+FS + +LA + G Sbjct: 69 PALISILNEYGCGCDCSSYTELMIARSLGITGHDIMFSSNDTPAADFELADKLGAIVNFD 128 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 + V+ ++ R NP I + K+G+ Q+ + Sbjct: 129 DISHIEFYE---RVAGPIPKTVSCRFNPGGLFQLSNGIMDNPGDSKYGMTTEQLFDAFRM 185 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 + + A L + R G ++ I++ GG+GI Y Sbjct: 186 LKAKGAEDFGIHAFLASNTVTNDYYPKLARILFELAVRLERETGAHVAFINLSGGVGIPY 245 Query: 245 HSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + + +H + I E GRF++ G LVTK I K+ Sbjct: 246 LPEQQANDIHAIGEGVHAAYDEILVPAGMGDVAICTEMGRFMMGPYGCLVTKAIHEKRI- 304 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL-----HIHADIVGPICETGDFIA 352 K ++ +D + D +RP +Y AYH + + P G DI G +CE D A Sbjct: 305 YKDYIGVDASAVDLIRPAMYGAYHHVTVMGQPGGPDKSAAPVTNTYDITGNLCENNDKFA 364 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELI 411 ++R++ GDLL I TGA+G YN RL E+++ +IR + Sbjct: 365 IDRELPHIDMGDLLVIHDTGAHGYSMGYNYNGRLRSAEVLLRPDGAADLIRRAERPGDYF 424 Query: 412 E-LDSIPAWLQKTPKQSSEN 430 LD +P + K +E+ Sbjct: 425 STLDVLPCGRELLAKSRAES 444 >gi|260888729|ref|ZP_05899992.1| diaminopimelate decarboxylase [Selenomonas sputigena ATCC 35185] gi|260861482|gb|EEX75982.1| diaminopimelate decarboxylase [Selenomonas sputigena ATCC 35185] Length = 505 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 110/434 (25%), Positives = 169/434 (38%), Gaps = 22/434 (5%) Query: 5 KYFEGSLHAENV------SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCY 57 G L E V LE++ TPF+ Y AI +N+ F AF + + Sbjct: 77 NILGGILMTEKVFPISRERLEEIIEQYPTPFHIYDEKAIRENFRRFKRAFSWAPNFTEHF 136 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+KA N +++ L G+G D S EL + AA + E I+ + +E A + Sbjct: 137 AVKAAPNPRLLQILHEEGAGTDCSSIAELLLSEAAGIKGEEIMLTSNDTPAEEFQKAREL 196 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G + ++ + P I I E K+G+ HQ Sbjct: 197 GAIINLDDISHIDYL--EKCAGFPDCLSFRYNPGPLIEG---NDIIGKPTEAKYGLTHHQ 251 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 I Y A + M I S++ A + + + G +++ +++G Sbjct: 252 IFDAYKIAREKGVKRFGLHTMVISSELRNEAFLFTAELMFNLAVEIKKRLGISLEFVNLG 311 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKV 290 GG GI Y + S I + + I E GR++ G LVT Sbjct: 312 GGFGIPYRPEEEAIDVERVGSGIEALYKKIIEPAGLAGLAIKAESGRYITGPYGWLVTTA 371 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 + KK+ K ++ LD M + MRP LY AYH I + HI DI G +CE D Sbjct: 372 LHEKKT-YKDYIGLDACMANLMRPALYGAYHHITVVGKEDAFCDHI-YDITGSLCENNDK 429 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQE 409 A++RK+ GD + I TGA+G YN +L E+++ +IR T + Sbjct: 430 FAIDRKLPKIDIGDRIVIHDTGAHGHAMGFNYNGKLRSAELLLREDGSVELIRRAETLGD 489 Query: 410 LIELDSIPAWLQKT 423 IP L K Sbjct: 490 YFATLDIPGGLMKP 503 >gi|319788956|ref|YP_004090271.1| Orn/DAP/Arg decarboxylase 2 [Ruminococcus albus 7] gi|315450823|gb|ADU24385.1| Orn/DAP/Arg decarboxylase 2 [Ruminococcus albus 7] Length = 422 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 95/403 (23%), Positives = 144/403 (35%), Gaps = 15/403 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSG 77 E++ TPF+ Y I +N AF +A+KA N +++ L G G Sbjct: 12 EEIIKSYPTPFHIYDEKGIRENARNLYKAFSWNKGYKEFFAVKATPNPYILQILKEEGCG 71 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D S EL + E I+FS +E A + G Y + Sbjct: 72 VDCSSLTELMLSECCGFKGEDIMFSSNVTPAEEYVKAKEMGAYINLDDFTHIDFL----D 127 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G I R NP + KI + K+G QI + Sbjct: 128 KLCGIPETICCRYNPGGTFSISTKIMDNPGDAKYGFTHEQIIEGFRILKEKGAKYFGIHA 187 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + A L + G + I++ GG+GIAY D Sbjct: 188 FLASNTVTNEYYPKLARILFELAVEIKEKVGIEFKFINLSGGVGIAYEPDKPQNDIFAIG 247 Query: 258 SLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 +H+ F + I E GR+++A G LVT V K + + + A N Sbjct: 248 EGVHKAFDEILVPAGLGDVAIFTELGRYMLAPYGHLVTTVKHFKHTYKEYAGVDACACNL 307 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 RP +Y AYH I + H D+ G +CE D A++R + GD+L I Sbjct: 308 M-RPAMYGAYHHITVLGKEDKPCDH-KYDVTGSLCENNDKFAIDRMLPELEIGDILVIHD 365 Query: 371 TGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+G YN RL E+++ +IR T + Sbjct: 366 AGAHGFSMGYNYNGRLRSAELLLKENGDVQMIRRAETPADYFS 408 >gi|325963845|ref|YP_004241751.1| diaminopimelate decarboxylase [Arthrobacter phenanthrenivorans Sphe3] gi|323469932|gb|ADX73617.1| diaminopimelate decarboxylase [Arthrobacter phenanthrenivorans Sphe3] Length = 491 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 115/449 (25%), Positives = 181/449 (40%), Gaps = 44/449 (9%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------DTMVCYALKAN 62 G L + V + L TP + S FS+AF+ V YA K+ Sbjct: 41 GELTLDGVPVSDLQRKYGTPLFVMSENDFRARARAFSDAFNNAFADVCGGVDVYYAGKSF 100 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 AV++ + G LD S GEL A A +P + G K+ EI AL + Sbjct: 101 LCTAVVRWVEEEGLRLDTASGGELAVAAKAGIPGADVALHGNNKSDGEIHRALDMKLGRI 160 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP-------- 174 V+S EL + A G++A + R+ P ++A+TH+ I+T ++ KFG+ Sbjct: 161 VVDSLGELVRVGDIAERRGEQAKVMLRLTPGVHAHTHEFIATAHEDQKFGLSMAADTTEQ 220 Query: 175 --IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNI 231 + A AS PG+++ G+ HIGSQI + E F A + L + Sbjct: 221 AGLSAAEEAVAAASAHPGIELLGLHCHIGSQIFEPEGFAMAAEKLLRFLAAMQEKYSIVL 280 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVG 284 +D+GGG GIAY P +++ A + + +I +EPGR +V Sbjct: 281 PELDLGGGYGIAYTPVDTPRPAAEIAEAMAAVVRSTCAELGIDSPRISIEPGRAIVGSTT 340 Query: 285 ILVTKVI------------------SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + +V + + +V +D M+D RP LYDA + Sbjct: 341 FTLYEVGTLKTVRVDAPAEPGASDGGNNVTYPRRYVSVDGGMSDNARPVLYDADYSAILA 400 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + +VG CE+GD + + + GDLL + TGAY S YN Sbjct: 401 SRTSSAAPQ-LSRVVGKHCESGDIVVRDVYLPEDVAAGDLLAVPGTGAYCWALSSNYNYL 459 Query: 386 LLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + V +I T ++L+ D Sbjct: 460 ARPGVVAVRDGSARLIVRGETEEDLLNRD 488 >gi|183596304|ref|ZP_02958332.1| hypothetical protein PROSTU_00039 [Providencia stuartii ATCC 25827] gi|188023908|gb|EDU61948.1| hypothetical protein PROSTU_00039 [Providencia stuartii ATCC 25827] Length = 419 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 106/413 (25%), Positives = 174/413 (42%), Gaps = 27/413 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L L TP + Y ++ I + V +A KA SN +++ + G Sbjct: 17 LSTLPEQFGTPVWVYDSSVIIERINQLK-----PFDTVRFAQKACSNIHILRLMREQGVK 71 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ RAL A A R S + T D +D A + + ++ + + + Sbjct: 72 VDSVSLGEIERALVAGFQAGRE-NSEIVFTADVLDRATLARVTELDIPVNAGSIDMLSQI 130 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 P+ R+NP +K +TG + K GI + + + Sbjct: 131 GEQKSGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYQDLPKALEQIR-----RYNLSL 185 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + I + + + +Q+ S+ +IQ I GGGL Y Y Sbjct: 186 VGLHMHIGSGVDYQHLANVCDAMVEQVISSNADIQAISAGGGLSTPYREQDEVIDIQHYY 245 Query: 258 SLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 SL + ++ +EPGR+LVA+ G+L+ +V ++K + +V++D ND Sbjct: 246 SLWNTARQRIERHLGHSIELEIEPGRYLVAESGVLLAEVRAVKTMGSRHYVLVDSGFNDL 305 Query: 312 MRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP +Y +YH I + + GP+CE+GD R + + Sbjct: 306 MRPAMYGSYHHISVLPAEGRSLENVPLKETIVAGPLCESGDVFTQQEGGMVETRLLPDVQ 365 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GD L TGAYGA S YNSR L+PE+++ +IR R T +EL+ L+ Sbjct: 366 VGDYLVFHDTGAYGASMSSNYNSRPLLPEVLLIEGTPKLIRRRQTIEELLALE 418 >gi|21224744|ref|NP_630523.1| diaminopimelate decarboxylase [Streptomyces coelicolor A3(2)] gi|8134396|sp|Q9ZBH5|DCDA_STRCO RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|4158184|emb|CAA22747.1| diaminopimelate decarboxylase [Streptomyces coelicolor A3(2)] Length = 440 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 114/424 (26%), Positives = 173/424 (40%), Gaps = 34/424 (8%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 + L A TP + Y I FD ++ YA KA SN +++ + Sbjct: 20 DGPRLAAAAAEHGTPLWLYDAATIRAQIDRLRR-FD----VIRYAQKACSNLHILRLMRE 74 Query: 74 LGSGLDIVSEGELRRALAAPV----PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G +D VSEGE+ RALAA E IVF+ + ++ GI Sbjct: 75 EGVHVDAVSEGEIERALAAGYRVGGDDEPIVFTADLLNRSTLRRVVELGIPVNAGSP--- 131 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + P+ R+NP +K +TG + K GI + A Sbjct: 132 --QMLDQVGRAAPGHPVWIRINPGFGHGHSRKTNTGGEHSKHGIWHEHLEESLALVDRHG 189 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + I + + + +Q+R G +I+ I GGGL + Y Sbjct: 190 LDLV-----GLHMHIGSGVDYGHLESVCETMVKQVRMAGRDIRAISAGGGLSVPYTPGDP 244 Query: 250 PPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + Y L ++ +EPGRFLVA G+L +V + K FV+ Sbjct: 245 EIDTDRYFELWDAARRELVSELGHPVRLEIEPGRFLVAGAGVLAAEVRAQKPVGSNYFVL 304 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD--IVGPICETGDFIA-------LN 354 +D ND MRP +Y + H ++ + R D + GP+CE+GD Sbjct: 305 VDAGFNDLMRPAMYGSNHRVSVLDADGAPRASDARDTVLAGPLCESGDVFTQVEGGDVEP 364 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GDL+ TGAYGA S TYNSR LIPE++V+G++ +IR R T EL+ + Sbjct: 365 VPVPRTDVGDLVVFHDTGAYGASMSSTYNSRPLIPEVLVDGAETRLIRRRQTVAELLAPE 424 Query: 415 SIPA 418 P Sbjct: 425 LEPG 428 >gi|204928332|ref|ZP_03219532.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322654|gb|EDZ07851.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 420 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 122/427 (28%), Positives = 188/427 (44%), Gaps = 29/427 (6%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 Y E L+AEN L +L P + Y I + FD +V +A KA SN Sbjct: 7 YAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQKACSNI 59 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ + G +D VS GE+ RALAA + + T D ID A + + ++ Sbjct: 60 HILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARVSELHIP 118 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + + + + + RVNP +K +TG + K GI + A Sbjct: 119 VNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP-----A 173 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + K + I I + ++ + +Q+ G +++ I GGGL I Y Sbjct: 174 ALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGGLSIPYR 233 Query: 246 SDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 P + Y L + K+ +EPGRFLVA G+LVT+V S+K+ + Sbjct: 234 EGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSR 293 Query: 300 TFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-- 354 FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 294 HFVLVDAGFNDLMRPAMYGSYHRISALAADGRAFENGPWVETVVAGPLCESGDVFTQQEG 353 Query: 355 -----RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR R T +E Sbjct: 354 GMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEE 413 Query: 410 LIELDSI 416 L+ L+ Sbjct: 414 LLALEMF 420 >gi|239917326|ref|YP_002956884.1| diaminopimelate decarboxylase [Micrococcus luteus NCTC 2665] gi|239838533|gb|ACS30330.1| diaminopimelate decarboxylase [Micrococcus luteus NCTC 2665] Length = 490 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 117/453 (25%), Positives = 185/453 (40%), Gaps = 40/453 (8%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------DTMVCYALKA 61 +G L + + LA TP F FD V YA K+ Sbjct: 40 DGELTVQGLRASALAAEFGTPLLVVDEDDFRARARAFREGFDAAFADLCGGADVYYAGKS 99 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + + A G +D S GEL ALAA V I G K+ E+ AL++G+ Sbjct: 100 MLTLSTARWAAEEGLRVDTASGGELAIALAAGVYPAHIGLHGNNKSDAELRTALEAGVGR 159 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V+S EL L A G +AP+ R+ P ++A+TH I+T ++ KFG+ + + Sbjct: 160 IIVDSLDELTHLAALAAEAGHRAPVMLRLTPGVHAHTHDFIATAHEDQKFGLSLAPASTD 219 Query: 182 YA--------------YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 A + + GV HIGSQI + E F A + + ++++ Sbjct: 220 RDGNVAGRSPAAVAVDTALATESIDLLGVHCHIGSQIFEAEGFGLAAGRVLEFLAEVKAE 279 Query: 228 GHNIQ-HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFL 279 +D+GGG GIAY + P +++ A + ++ LEPGR + Sbjct: 280 HGVELAELDLGGGHGIAYTAVDEPRPAAEIADALADDVQKTVERLGLRCPRVSLEPGRAI 339 Query: 280 VADVGILVTKVISIKKSAD---------KTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 G+ + V K + +V +D M+D RP LYDA + Sbjct: 340 SGPAGLTLYTVGVTKTVDADAPDGGTAARRYVAVDGGMSDNPRPVLYDADY-TAVSARRT 398 Query: 331 GDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIP 389 + + +VG CE+GD + + + GDLL + TGAY V S YN+ Sbjct: 399 SEAEPALSRVVGKHCESGDILVRDVYLPADLGRGDLLAVPATGAYTHVMSSNYNALARPA 458 Query: 390 EIMVNGSQFHIIRPRMTFQELIELDSIPAWLQK 422 + V+G +I R T ++L ++ P L + Sbjct: 459 VVAVSGGLARVIIRRETQEDLFAREADP-RLAR 490 >gi|23394392|gb|AAN31485.1| diaminopimelate decarboxylase [Phytophthora infestans] Length = 422 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 107/416 (25%), Positives = 171/416 (41%), Gaps = 17/416 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHL 74 L+ LA TP Y I N AF D YA+KA N A++K L Sbjct: 12 RLDALAETYGTPLQIYDEQLIRDNARRLLTAFRAHFPDFQQFYAVKALPNPAILKLLHQE 71 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G G+D S EL VP ++++F+ +++ A G+ + + Sbjct: 72 GCGMDCSSSAELHIVKELGVPGDQVIFTSNFTAKNDLGTAFDQGVIMNLDDVSLVDSLVA 131 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + K G + KFG+P QI Y A G K Sbjct: 132 -VRGKCPELMSFRLNPGIGRTDSETKSNVLGGPDAKFGVPPFQIVEAYRKAQQ-AGAKGF 189 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G+ M GS + E + + +L + Q + G + +++GGGLGI Y D P + Sbjct: 190 GIHMMTGSCVMNQEYWRETVTVLFNTIVQLKKELGIEFEFMNIGGGLGIPYREDQEPVNV 249 Query: 254 SDYASL--------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 A + + ++ ++ +E GRF+ G LVT+ +IK++ + +D Sbjct: 250 EAIAKMLREVFDEAVKEHGLQTLPRLCMENGRFMTGPFGWLVTRCEAIKETYG-RYYGVD 308 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 M MRP +Y A+H I+ + + +VG +CE D+ A +R + + GDL Sbjct: 309 ACMAHLMRPGMYGAFHHISIPAR--ANEEVSPSHVVGTLCENNDWFAKDRPLPKAQVGDL 366 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDSIPAWL 420 I TGA+ YN +L PE+++ +IR R T+ L IPA L Sbjct: 367 FVIHDTGAHSHSMGFQYNGKLRAPEVLLRADGSDSLIRERETYDALYGNCVIPADL 422 >gi|260655042|ref|ZP_05860530.1| diaminopimelate decarboxylase [Jonquetella anthropi E3_33 E1] gi|260630153|gb|EEX48347.1| diaminopimelate decarboxylase [Jonquetella anthropi E3_33 E1] Length = 452 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 106/405 (26%), Positives = 172/405 (42%), Gaps = 7/405 (1%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 SL +LA TP Y + + + + D V YA KA A+ + ++ Sbjct: 40 GGASLIELAERFGTPLYVFDEAELRRRCRRLVESVKKYDADVYYAGKAFLPLAMAQLVSS 99 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 G GLD+VS GEL AL+A + A RI G KT + + AL+ G+ V+S EL+ L Sbjct: 100 EGMGLDVVSLGELALALSAGISAGRIELHGNAKTEELLSRALRLGVGRIVVDSADELELL 159 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A + I RV+P I A H I T + KFG Q+ A+ LP V + Sbjct: 160 GRLAKNEKTPPKILLRVSPGIAAGAHHAIQTATDDCKFGFSPAQLVHAVKRAADLPVV-L 218 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDH---- 248 +G+ +H+GSQID++E F + + + DL L++ +D+GGG + Sbjct: 219 AGLHVHLGSQIDRLEPFFEGVQTMVDLLASLKNACGFEADEMDLGGGFAVRSPEGPLDAG 278 Query: 249 -RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 A G ++ EPGR++ + + V +V S+K++ Sbjct: 279 DFIEKICLRAKSASSAAGLRLPRLSFEPGRWVSSPACVTVYRVQSVKETTSGRIYAALDG 338 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 +V+ A +R + G CE+GD + + + R GDL+ Sbjct: 339 GMTDNPRPCLYGAPYSPVLVSSADERKEGTVTLAGCCCESGDVLVSDAVMPELRRGDLVA 398 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 + TGAY TYN + V+ ++ R +L++ Sbjct: 399 LPDTGAYTYSMFMTYNGAFRPAVVFVSSGTARLVVRRWNEGDLLK 443 >gi|237729800|ref|ZP_04560281.1| diaminopimelate decarboxylase [Citrobacter sp. 30_2] gi|226908406|gb|EEH94324.1| diaminopimelate decarboxylase [Citrobacter sp. 30_2] Length = 418 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 122/425 (28%), Positives = 191/425 (44%), Gaps = 31/425 (7%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L A+N L +L P + Y I S FD +V +A KA SN + Sbjct: 9 DTDLTADN--LLRLPAEFGCPVWVYDAQIIRGQIAKLSQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + T D ID A + ++ ++ Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGFVPGKDEI---VFTADMIDEATLARVHELSIPVN 118 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + ++ + + RVNP +K +TG + K GI + + Sbjct: 119 AGSVDMLEQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYSDLPAALEVIQR 178 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 K+ G+ MHIGS + + ++ + +Q+ G +++ I GGGL I YH Sbjct: 179 YKL-KLVGIHMHIGSGV----DYAHLEQVCGAMVRQVVEFGQDLEAISAGGGLSIPYHEG 233 Query: 248 HRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + Y L + + +EPGRFLVA+ G+LV +V S+K+ + F Sbjct: 234 EEAIDTDHYFGLWNAAREQIAKHLGHPIALEIEPGRFLVAEAGVLVAQVRSVKEMGSRHF 293 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD---IVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I+ + H + GP+CE+GD Sbjct: 294 VLIDAGFNDLMRPAMYGSYHHISALSGDGRSLEHTPQRETVVAGPLCESGDVFTQQEGGN 353 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 R + PGD L + TGAYGA S YNSR L+PE++ + +IR R T EL+ Sbjct: 354 VETRLLPAVVPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGVARLIRRRQTIDELL 413 Query: 412 ELDSI 416 L+ I Sbjct: 414 ALELI 418 >gi|317493899|ref|ZP_07952316.1| diaminopimelate decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918226|gb|EFV39568.1| diaminopimelate decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 420 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 119/416 (28%), Positives = 190/416 (45%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I++ FD ++ +A KA SN +++ + G Sbjct: 16 NLITLPSRFGGPVWVYDGEIIKQQIEKLRE-FD----VIRFAQKACSNIHILRLMHQQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A S + T D +D A + + N+ + + ++ Sbjct: 71 KVDSVSLGEIERALLAGFQPGGS-PSQIVFTADVLDEATIARVVELNIPVNAGSADMLKQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI ++ A ++ G+ Sbjct: 130 LGERSAGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWFEELPQALALIKQYDL-ELIGL 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + ++ + +Q+ GH+IQ I GGGL I Y + S Y Sbjct: 189 HMHIGSGV----DYQHLAQVCDTMVRQVIELGHDIQAISAGGGLSIPYQKGDESINVSHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + +EPGR+LVA+ G+LV +V ++K + FV++D ND Sbjct: 245 YGLWNDARERIARHLGHPVHLEIEPGRYLVAESGVLVAQVRAVKNMGSRHFVLVDAGFND 304 Query: 311 FMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIA-------LNRKIALP 360 MRP +Y +YH I+ + D + + + I GP+CE+GD R I Sbjct: 305 LMRPAMYGSYHHISLLPADGRDVTAQPRVESVIGGPLCESGDVFTQKAGGEVETRSIPAA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L TGAYGA S YNSR L+PE++ + +IR R T +EL+ L+ + Sbjct: 365 QVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGESRLIRRRQTIEELLALEMV 420 >gi|56414960|ref|YP_152035.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363889|ref|YP_002143526.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56129217|gb|AAV78723.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095366|emb|CAR60924.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 420 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 123/427 (28%), Positives = 187/427 (43%), Gaps = 29/427 (6%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 Y E L+AEN L +L P + Y I + FD +V +A KA SN Sbjct: 7 YAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQKACSNI 59 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ + G +D VS GE+ RALAA + + T D ID A + + ++ Sbjct: 60 HILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARVSELHIP 118 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 + + + + I RVNP +K +TG + K GI + A Sbjct: 119 VNAGSVDMLTQLGQVSPGHRIWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP-----A 173 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + K + I I + ++ + +Q+ G ++ I GGGL I Y Sbjct: 174 ALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDLDAISAGGGLSIPYR 233 Query: 246 SDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 P + Y L + K+ +EPGRFLVA G+LVT+V S+K+ + Sbjct: 234 EGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSR 293 Query: 300 TFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-- 354 FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 294 HFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDVFTQQEG 353 Query: 355 -----RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR R T +E Sbjct: 354 GMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEE 413 Query: 410 LIELDSI 416 L+ L+ Sbjct: 414 LLALEMF 420 >gi|293977852|ref|YP_003543282.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri DMIN] gi|292667783|gb|ADE35418.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri DMIN] Length = 404 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 120/401 (29%), Positives = 187/401 (46%), Gaps = 16/401 (3%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAH 73 ++ L TP Y Y IE Y +F + + + YA KAN N +++ Sbjct: 9 GINFHDLTKRYGTPLYVYDANQIEFQYKLIKKSFFYIENLKINYACKANPNISILNFFKK 68 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 LGSGLD VS E+ L A + I+++ G ++ EI A+++G+ L Sbjct: 69 LGSGLDTVSIQEVEIGLKAGFKPKEIIYTPNGVSLSEIKKAIKAGVLINIDNLS-----L 123 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 ++ PI R+ P+I +KKIS G KFGI +Q+ +L K+ Sbjct: 124 LEQIGHENPNYPIGIRITPNIIGGGNKKISVGHINSKFGISYYQLPNLKRIVENTGI-KV 182 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH--SDHRPP 251 G+ MH GS I +E F + +L ++ S+ + +++ID G G + YH Sbjct: 183 EGIHMHTGSDIIDLEVFLQGADILLNV----ASSFNELKYIDFGSGFKVPYHKNDTKTDL 238 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 KI+ EPG+FLV++ G + KV IK + F +D N F Sbjct: 239 DMLGVFFKKKISRVCKNIKIVFEPGKFLVSESGYFIVKVNVIKHTTSTVFACVDSGFNHF 298 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 +RP YD+YH+I+ + NP+G +VG ICE+ D +N KI R GD+L Sbjct: 299 IRPMFYDSYHQIDNLSNPSGK--LRSYTVVGYICES-DTFCVNIKINEIREGDILCFRNA 355 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 GAY S YNSR E+++ ++ +IR R Q+L++ Sbjct: 356 GAYCFSMSSNYNSRYRPSEVIIYNNKSFLIRRRENMQDLLK 396 >gi|304407412|ref|ZP_07389065.1| diaminopimelate decarboxylase [Paenibacillus curdlanolyticus YK9] gi|304343853|gb|EFM09694.1| diaminopimelate decarboxylase [Paenibacillus curdlanolyticus YK9] Length = 445 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 122/425 (28%), Positives = 195/425 (45%), Gaps = 18/425 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 G L + LA TP Y A+ + + +F V YA KA Sbjct: 13 GQLEIGGCNTLGLAKEYGTPLYVIDEAAVRQRCRDYVQSFRAHWNHVDVAYASKAFMIGQ 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 ++ + G LD+VSEGEL+ AL A PA RI F G KT DEI LA+ SG+ ++ Sbjct: 73 MVNLVVEEGMSLDVVSEGELKLALWAGAPASRITFHGNYKTQDEIRLAVASGVRTLVIDC 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ + Q A S GK + RVN IN ++ K +TG E KFG+ I ++ A A+ Sbjct: 133 LEEIDAIEQEAQSQGKLQAVDIRVNLAINVYSNPKFTTGHMESKFGLSIFDHTAMRAIAA 192 Query: 187 TLPGVKIS--GVDMHIGSQIDQIESFHKAFKL-LRDLTQQLRSNGHNIQHIDVGGGLGIA 243 L + G+ H+GSQI +++ +A + + ++G I +GGG+G+ Sbjct: 193 ILQSSSLMLRGLHFHLGSQIQEVKFHQQALERLGAFIQAVTDAHGWKPSSITMGGGMGVN 252 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKII-------LEPGRFLVADVGILVTKVISIKKS 296 Y RPP+ ++A + F + +EPGR ++A+ G + V IK Sbjct: 253 YSGYARPPTPQEWADGVMPVFREHVAPLCEENVIFGIEPGRSVIAEYGTTLYTVGPIKPV 312 Query: 297 ADKT----FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI-HADIVGPICETGDFI 351 F+ +D ++D RP +Y+A+H + +P + + I G CET D + Sbjct: 313 PAGQDVRAFISVDGGLSDNPRPIMYEAHHNVLLAAHPNAEPTDMLPVRIFGRHCET-DRM 371 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + + GDLL ++ TGAY S YN + + V G + + R F++ I Sbjct: 372 IESAPLPEVKTGDLLAVQCTGAYTYAMSNNYNRFMKPAVVFVQGGKSRLAIRREVFEDSI 431 Query: 412 ELDSI 416 + + Sbjct: 432 RTEMM 436 >gi|15673266|ref|NP_267440.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis Il1403] gi|12724260|gb|AAK05382.1|AE006360_11 diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis Il1403] Length = 419 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 151/404 (37%), Gaps = 13/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y I + AF +A+KA A++K L G Sbjct: 11 LEQITKEFPTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + ++FS +E A Q G E + Sbjct: 71 GVDCASYVELLLSEKCGFDGSEMMFSSNDTPAEEFQFANQLGATINLDA--YEDIEFLKN 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 ++ R NP KI +E KFG+ Q+ L K Sbjct: 129 LTDFIFPETMSLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKKFGMH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A KL + + G + I++ GG+G+ Y D + Sbjct: 189 SFLASNTVTNDYYPELANKLFKLALEIREETGITLDFINLSGGIGVNYRPDEEANDIAKI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + KI E GRF++A G L+TKV+ IK + +V +D + Sbjct: 249 GQGVHEAYDEVLRANGIENLKIYTELGRFMLAPHGHLITKVLHIK-ETYRKYVGVDASAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP YDAYH I D DI G +CE D A R GDLL I Sbjct: 308 NLMRPAFYDAYHHITVAGK-EKDEATEIYDITGSLCENNDKFAKERAFPKIEIGDLLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN++L E+++ + +IR + Sbjct: 367 DTGAHGFSMGYQYNAKLRSSEVLLQEDGKTRLIRRAEKPADYFA 410 >gi|307104892|gb|EFN53143.1| hypothetical protein CHLNCDRAFT_58576 [Chlorella variabilis] Length = 889 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 127/408 (31%), Positives = 214/408 (52%), Gaps = 6/408 (1%) Query: 8 EGSLHAENVSLEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L+ + + ++ + A +PFY YS I +NY + A +G+D++V YA+KAN+N Sbjct: 84 DGFLYCDGLKVDDIRAQAAASPFYLYSKEKIRQNYNAYKEALEGLDSIVGYAVKANNNFK 143 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ L LGSG +VS ELR A+ A R +F+G GK E++LA+++G+ Sbjct: 144 IMQCLRELGSGAVLVSGNELRLAMMAGFDPTRTIFNGNGKLPRELELAVENGVLINVDSE 203 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 +L + A +GK+A + R+NPD++ H +STG KFGI + Sbjct: 204 F-DLANIQAAAAKVGKRARVLIRINPDVDPQVHPYVSTGLAGSKFGIRNTHLQWFLDQIK 262 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY-H 245 +++ G H+GS I ++ F A L+ + +Q+R G +++ +++GGGLGI Y Sbjct: 263 ADANLELVGAHCHLGSTITKVNIFRDATILMVEFIKQIREQGFDLKFLNIGGGLGIDYAR 322 Query: 246 SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 P+ D + +L +++EPGR +VA+ V V +K + +K F+++D Sbjct: 323 KGDVLPTPKDLIDTVRDLVSSLGLVLVIEPGRSMVANSSAFVNTVTGVKTNGNKNFIVVD 382 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 +M + +RP+LYDAY I A + D+VGP+CE+ DF+ +R + P GD Sbjct: 383 GSMAELIRPSLYDAYQHIELTAPHASEV--QTFDVVGPVCESADFLGKDRVLHTPVAGDG 440 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 L + GAY + YN +L E V +Q IR +T + + Sbjct: 441 LVVMDAGAYCMSMASNYNMKLAPEEWWVAERTQLQQIRRSVTLDDHMR 488 >gi|281491804|ref|YP_003353784.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis KF147] gi|281375518|gb|ADA65028.1| Diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis KF147] Length = 419 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 153/404 (37%), Gaps = 13/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y I + AF +A+KA A++K L G Sbjct: 11 LEQITKEFPTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + ++FS +E A Q G E + Sbjct: 71 GVDCASYVELLLSEKCGFDGSEMMFSSNDTPAEEFQFANQLGATINLDA--YEDIEFLKN 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 ++ R NP KI +E KFG+ Q+ L K Sbjct: 129 LTDFIFPETMSLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKKFGMH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A KL + + G + I++ GG+G+ Y D + Sbjct: 189 SFLASNTVTNDYYPELASKLFKLALEIREETGITLDFINLSGGIGVNYRPDEEANDIAKI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + KI E GRF++A G L+TKV+ +K + +V +D + Sbjct: 249 GQGVHEAYDEVLSANGIENLKIYTELGRFMLAPHGHLITKVLHLK-ETYRKYVGVDASAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP YDAYH I G+ I DI G +CE D A R GDLL I Sbjct: 308 NLMRPAFYDAYHHITVAGKENGEATEI-YDITGSLCENNDKFAKERAFPKIEIGDLLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN++L E+++ + +IR + Sbjct: 367 DTGAHGFSMGYQYNAKLRSSEVLLQEDGKTRLIRRAEKPADYFA 410 >gi|251788371|ref|YP_003003092.1| diaminopimelate decarboxylase [Dickeya zeae Ech1591] gi|247536992|gb|ACT05613.1| diaminopimelate decarboxylase [Dickeya zeae Ech1591] Length = 420 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 114/416 (27%), Positives = 177/416 (42%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL L P + Y I + FD + +A KA SN ++ + G Sbjct: 16 SLRALPERFGCPLWAYDADTIIERIGQLRQ-FD----TIRFAQKACSNLHILALMRQQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RALAA + T D +D A ++ N+ + + + Sbjct: 71 KVDSVSLGEIERALAAGFEPGTD-AHEIVFTADVLDDATLQRVHELNIPVNAGSIDMLHQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ R+NP +K +TG + K GI + A + +K+ G+ Sbjct: 130 LGERSPGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQALE-ALSRYRLKLIGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + ++ + QQ+ + G +++ I GGGL I Y + Y Sbjct: 189 HMHIGSGV----DYRHLEQVCDAMVQQVLAVGQDLEAISAGGGLSIPYRHGGERIDTQHY 244 Query: 257 ASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L ++ + +EPGRFLVA+ G+LV +V +K + FV++D ND Sbjct: 245 YGLWNRAREQIAGHLGHPVTLEIEPGRFLVAESGVLVAQVRVVKDMGSRHFVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALNR-------KIALP 360 MRP +Y +YH I + GP+CE+GD + Sbjct: 305 LMRPAMYGSYHHITLLPGDGRDLSQSALHDTVVAGPLCESGDVFTQQAGGGVETLALPAA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L TGAYGA S YNSR LI E++ Q +IR R T +L+ L+ + Sbjct: 365 QVGDYLVFHDTGAYGASMSSNYNSRPLIAEVLFEQGQPRLIRRRQTLDDLLALERV 420 >gi|125624015|ref|YP_001032498.1| LysA protein [Lactococcus lactis subsp. cremoris MG1363] gi|124492823|emb|CAL97778.1| LysA protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070785|gb|ADJ60185.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. cremoris NZ9000] Length = 419 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 153/404 (37%), Gaps = 13/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y I + AF +A+KA A++K L G Sbjct: 11 LEQITAEYPTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + ++FS +E A Q G E + Sbjct: 71 GVDCASYVELLLSEKCGFDGTEMMFSSNDTPAEEFQFANQLGATINLDA--YEHIEFLKN 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 ++ R NP KI +E KFG+ Q+ L + Sbjct: 129 LPDFVFPKTMSLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKEFGMH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A KL + + G + I++ GG+G+ Y D + Sbjct: 189 SFLASNTVTNDYYPELARKLFELALEIRQETGITLDFINLSGGIGVNYRPDEEANDIAKI 248 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + + KI E GRF++A G L+TKV+ +K + +V +D + Sbjct: 249 GQGVHKAYEEILTANGIENLKIYTELGRFMLAPHGHLITKVLHLK-ETYRKYVGVDASAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP YDAYH I + DI G +CE D A R + GDLL I Sbjct: 308 NLMRPAFYDAYHHITVAGKEKQEA-TETYDITGSLCENNDKFAKERAFPEIKVGDLLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ + +IR + Sbjct: 367 DTGAHGFSMGYQYNAKLRSAEILLQEDGKTRLIRRAEKPADYFA 410 >gi|254819272|ref|ZP_05224273.1| LysA_1 [Mycobacterium intracellulare ATCC 13950] Length = 455 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 113/421 (26%), Positives = 179/421 (42%), Gaps = 18/421 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 EG L V+L +A TP Y V YA K+ + A Sbjct: 40 EEGRLCVGGVALADIADEFNTPAYVIDEADFRH--RARRYRRTLRGVEVVYAGKSLLSTA 97 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + G G+D+ S GEL AL V RIV G K+ DE+ A+++G+ ++S Sbjct: 98 VARWARDEGLGVDVCSAGELATALTGGVDPARIVMHGNAKSPDELRDAVRAGVGRIVLDS 157 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E+ L ++ + RV PDI+ + H+ ++TG + KFG + H+ A A Sbjct: 158 CMEIAYLA---GLARRRQRVLIRVTPDIDIHGHRAVTTGVSDQKFGFTLAGDHAADAVAR 214 Query: 187 TLPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 L + G+ HIGSQ+ + +A + + +R+ + +++GGG I Sbjct: 215 VLAHPILDLVGLHCHIGSQVSDAALYGEAIRRMIAAMADIRARHGVILTELNIGGGHAIP 274 Query: 244 YHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y R + A + +I++EPGR + G+ + +V S+K Sbjct: 275 YVPGDRELDLDELAAAIEDALDEACAAEQFPRPQIVVEPGRAISGRAGVTLYRVRSVKTQ 334 Query: 297 -ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +TFV +D M+D R LY A + + N L + G CE+GD IA + Sbjct: 335 FGGRTFVAVDGGMSDNPRVALYGAQY-AVALANRHPLGLKQTVTVAGRHCESGDEIARDI 393 Query: 356 KIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++ RPGDLL + TGAY + YN + V + + R T +LI D Sbjct: 394 ELPADLRPGDLLAVACTGAYHHSMASNYNMVGRPSLVAVKDGRARELVRRETVADLIARD 453 Query: 415 S 415 Sbjct: 454 C 454 >gi|326406821|gb|ADZ63892.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis CV56] Length = 419 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 151/404 (37%), Gaps = 13/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y I + AF +A+KA A++K L G Sbjct: 11 LEQITKEFPTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + ++FS +E A Q G E + Sbjct: 71 GVDCASYVELLLSEKCGFDGSEMMFSSNDTPAEEFQFANQLGATINLDA--YEDIEFLKN 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 ++ R NP KI +E KFG+ Q+ L K Sbjct: 129 LTDFIFPETMSLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKKFGMH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A KL + + G + I++ GG+G+ Y D + Sbjct: 189 SFLASNTVTNDYYPELASKLFKLALEIREETGITLDFINLSGGIGVNYRPDEEANDIAKI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + KI E GRF++A G L+TKV+ IK + +V +D + Sbjct: 249 GQGVHEAYDEVLRANGIENLKIYTELGRFMLAPHGHLITKVLHIK-ETYRKYVGVDASAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP YDAYH I D DI G +CE D A R GDLL I Sbjct: 308 NLMRPAFYDAYHHITVAGK-EKDEATEIYDITGSLCENNDKFAKERAFPKIEIGDLLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN++L E+++ + +IR + Sbjct: 367 DTGAHGFSMGYQYNAKLRSSEVLLQEDGKTRLIRRAEKPADYFA 410 >gi|15803358|ref|NP_289391.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 EDL933] gi|15832949|ref|NP_311722.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. Sakai] gi|168747702|ref|ZP_02772724.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4113] gi|168753756|ref|ZP_02778763.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4401] gi|168759947|ref|ZP_02784954.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4501] gi|168766812|ref|ZP_02791819.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4486] gi|168775696|ref|ZP_02800703.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4196] gi|168778833|ref|ZP_02803840.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4076] gi|168785664|ref|ZP_02810671.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC869] gi|168799952|ref|ZP_02824959.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC508] gi|195936442|ref|ZP_03081824.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4024] gi|208808464|ref|ZP_03250801.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4206] gi|208814582|ref|ZP_03255911.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4045] gi|208821663|ref|ZP_03261983.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4042] gi|209399305|ref|YP_002272302.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4115] gi|217327343|ref|ZP_03443426.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. TW14588] gi|254794777|ref|YP_003079614.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. TW14359] gi|261226137|ref|ZP_05940418.1| diaminopimelate decarboxylase, PLP-binding protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256607|ref|ZP_05949140.1| diaminopimelate decarboxylase, PLP-binding protein [Escherichia coli O157:H7 str. FRIK966] gi|12517327|gb|AAG57950.1|AE005512_9 diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EDL933] gi|13363167|dbj|BAB37118.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. Sakai] gi|187768808|gb|EDU32652.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4196] gi|188017893|gb|EDU56015.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4113] gi|189003434|gb|EDU72420.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4076] gi|189358681|gb|EDU77100.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4401] gi|189363642|gb|EDU82061.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4486] gi|189369323|gb|EDU87739.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4501] gi|189374225|gb|EDU92641.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC869] gi|189377664|gb|EDU96080.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC508] gi|208728265|gb|EDZ77866.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4206] gi|208735859|gb|EDZ84546.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4045] gi|208741786|gb|EDZ89468.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4042] gi|209160705|gb|ACI38138.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC4115] gi|209760940|gb|ACI78782.1| diaminopimelate decarboxylase [Escherichia coli] gi|209760942|gb|ACI78783.1| diaminopimelate decarboxylase [Escherichia coli] gi|209760946|gb|ACI78785.1| diaminopimelate decarboxylase [Escherichia coli] gi|217319710|gb|EEC28135.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. TW14588] gi|254594177|gb|ACT73538.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O157:H7 str. TW14359] gi|320189168|gb|EFW63827.1| Diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC1212] gi|326339093|gb|EGD62908.1| Diaminopimelate decarboxylase [Escherichia coli O157:H7 str. 1044] gi|326343025|gb|EGD66793.1| Diaminopimelate decarboxylase [Escherichia coli O157:H7 str. 1125] Length = 420 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMFDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIA------ 352 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 353 -LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VEPRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|313672479|ref|YP_004050590.1| diaminopimelate decarboxylase [Calditerrivibrio nitroreducens DSM 19672] gi|312939235|gb|ADR18427.1| diaminopimelate decarboxylase [Calditerrivibrio nitroreducens DSM 19672] Length = 417 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 95/404 (23%), Positives = 154/404 (38%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 +EK+ TPF+ Y I +N N F +A+KA N ++K L G Sbjct: 13 IEKIIEKYPTPFHIYDEKGIRENARRLKNVFSWNKGFKEFFAVKACPNPYILKILKEEGF 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + + E I+F+ +E A + G + N Sbjct: 73 GADCSSLPELVLSEKVGIVGEEIMFTSNETPANEYKKAYELGAIINLDDITHISYLEN-- 130 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 +LGK + I +E K+G Q+ Y + Sbjct: 131 --TLGKLPELLCFRYNPGPLREGNAIIGKPEEAKYGFTKAQLFEGYKIIKEKGVKRFGLH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M ++++ LL + + + G + I++GGG+GI Y + Sbjct: 189 TMVASNELNPDYFIETVRMLLELVLEINKELGIKFEFINMGGGIGIPYRPGQKAVDLQYV 248 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 ++ I F + K+ +E GR + G LVTK I K K ++ +D M Sbjct: 249 SNGIKSLFETMLKGSGMEDLKLYMENGRMITGPYGYLVTKAIHRKNI-YKNYIGVDACMA 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + + D+VG +CE D A++R + GD++ I Sbjct: 308 NLMRPGMYGAYHHITVMGKENAKHDKV-YDVVGSLCENNDKFAIDRNLPEIEIGDIIVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ IR T + Sbjct: 367 DTGAHGYAMGFNYNGKLRSAELLLKEDGTVEQIRRAETIDDYFA 410 >gi|227357849|ref|ZP_03842197.1| diaminopimelate decarboxylase [Proteus mirabilis ATCC 29906] gi|227161959|gb|EEI46977.1| diaminopimelate decarboxylase [Proteus mirabilis ATCC 29906] Length = 414 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 106/414 (25%), Positives = 180/414 (43%), Gaps = 27/414 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +LA TP + Y I ++ AFD +V +A KA SN +++ + G Sbjct: 10 LSQLAQTYGTPLWIYQGETISEHIEQLK-AFD----VVRFAQKACSNIHILRLMKQQGVK 64 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ RAL A R V + ++ + ++ + + ++ Sbjct: 65 VDSVSLGEIERALVAGFQGGRERSEIVFTADLLDEKTIER-VVELDIPVNAGSIDMLRQL 123 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + R+NP +K +TG + K GI + A + + Sbjct: 124 GERHQGHAVWIRINPGFGHGHSQKTNTGGENSKHGIWYEDVPEALAVINQY-----NLSL 178 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + I + + + +Q+ ++ +I+ I GGGL Y + + Y Sbjct: 179 VGFHMHIGSGVDYQHLASVCDAMVEQVLTSNVDIKAISAGGGLSTPYQQGDKRVDLNHYF 238 Query: 258 SLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 SL ++ +EPGRFLVA+ G+LV++V ++K ++ +V++D +D Sbjct: 239 SLWDSARQRIAQHLGHDIELEIEPGRFLVAESGVLVSQVRAVKSMGNRHYVLVDAGFSDL 298 Query: 312 MRPTLYDAYHEINYIVNP---AGDRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP +Y +YH+I + + GP+CE+GD R + Sbjct: 299 MRPAMYGSYHQITLLDKYGQLKSSEFQQETIVAGPLCESGDVFTQQEGGMVAPRLLPPAE 358 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD L I TGAYGA S YNSR LIPE++++ +IR R T +EL+ L+ Sbjct: 359 VGDYLVIHDTGAYGASMSSNYNSRPLIPEVLISQGIPQLIRRRQTIEELLALEI 412 >gi|121535393|ref|ZP_01667204.1| Orn/DAP/Arg decarboxylase 2 [Thermosinus carboxydivorans Nor1] gi|121305992|gb|EAX46923.1| Orn/DAP/Arg decarboxylase 2 [Thermosinus carboxydivorans Nor1] Length = 428 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 104/409 (25%), Positives = 164/409 (40%), Gaps = 15/409 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 LE++ +TPF+ Y I +N + AF +A+KA N +++ L G Sbjct: 13 LEEIIRQHKTPFHIYDEKGIRENARKLTAAFAWAPGFKEYFAVKATPNPYILQILREEGF 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A + E I+FS +E A Q G + + Sbjct: 73 GADCSSMAELVLAEMVGITGEEIIFSSNDTPAEEYVKAKQLGAIINLDDISH----IEFL 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G I+FR NP I +E K+G+ QI Y + Sbjct: 129 EKHAGLPEIISFRYNPGPLLKQGNTIIGKPEEAKYGLTRQQIFDAYRIVQAKGVKRFGLH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M I ++++ A + + + G ++ ID+GGG+GI Y + +P Sbjct: 189 TMVISNELNPQCFVETANMMFDLAIEIYQKLGIKVEFIDLGGGIGIPYRPEQQPVDLFYV 248 Query: 257 ASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 I + + K+ +E GR + G LV +V+ K+ K +V LD M Sbjct: 249 GEEIRKAYEAKIVANGLHPIKLAMECGRMITGPYGYLVARVLHKKEI-YKNYVGLDACMA 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I HI D+ G +CE D A++R + GD++ I Sbjct: 308 NLMRPGMYGAYHHITVAGKEDWPLDHI-YDVTGSLCENNDKFAIDRPLPRIDIGDIVVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDSIP 417 TGA+G YN +L E+++ +IR T +L + P Sbjct: 367 DTGAHGHAMGFNYNGKLRSAELLLRPDGSVKLIRRAETLADLFATLNFP 415 >gi|256024660|ref|ZP_05438525.1| diaminopimelate decarboxylase [Escherichia sp. 4_1_40B] Length = 420 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 171/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL + Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSHHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|148548869|ref|YP_001268971.1| diaminopimelate decarboxylase [Pseudomonas putida F1] gi|148512927|gb|ABQ79787.1| diaminopimelate decarboxylase [Pseudomonas putida F1] Length = 410 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 114/411 (27%), Positives = 179/411 (43%), Gaps = 25/411 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L + +P + Y + I + N FD V +A KAN N V++ + G Sbjct: 8 LAEAVRQHGSPLWAYDASTIAERVEQL-NVFD----TVRFAQKANPNLHVLRLMRAHGLV 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD VS GE+ RA AA + +GV T D +D + +E + + ++ Sbjct: 63 LDAVSLGEMERAFAAGASVDGD-PAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLRQL 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP +K +TG + K GI ++ A Sbjct: 122 GERSPGHRVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHG-----LHL 176 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + I + ++ R + + + G +I+ +GGGL Y S +P YA Sbjct: 177 VGVHMHIGSGVDYQHLEQVARSMIELIDRLGVDIEAFSIGGGLSTPYRSTDKPVDLQRYA 236 Query: 258 SLIH------QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + ++ +EPGRFLVA+ G LV +V ++K+ TFV++D ND Sbjct: 237 QTWAVARKEIEAMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVMIDAGFNDL 296 Query: 312 MRPTLYDAYHEIN--YIVNPAGDRLHIHADIVGPICETGDFIALN------RKIALPRPG 363 MRP +Y AYH + A DR + GP+CE+GD + + + + G Sbjct: 297 MRPAMYGAYHGMTLLDADGQAVDRPRQPTVVAGPLCESGDVFTQDDQALTPQDLPQAQVG 356 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 DLL I GAYGA S YNSR L+PE ++ +IR R T Q+L+ L+ Sbjct: 357 DLLVIHDAGAYGASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLSLE 407 >gi|323172859|gb|EFZ58490.1| diaminopimelate decarboxylase [Escherichia coli LT-68] Length = 420 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 110/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RA AA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERASAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL + Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A + K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLDHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|318606976|emb|CBY28474.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp. palearctica Y11] Length = 420 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 117/416 (28%), Positives = 180/416 (43%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + FD ++ +A KA SN +++ + G Sbjct: 16 NLIALPERFGCPVWAYDGEIITQKINQLR-HFD----VIRFAQKACSNIHILRLMHEQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + + T D +D A + ++ + + + Sbjct: 71 KVDSVSLGEIERALQAGFQP-GQEPAEIVFTADLLDQATLLRVTELSIPVNAGSIDMLDQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI + A K+ G+ Sbjct: 130 LGLHASGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIAKIQQYGL-KLVGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + ++ + QQ+ + G +I I GGGL I Y + Y Sbjct: 189 HMHIGSGV----DYQHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + +EPGRFLVA+ G+L+ +V ++K + +V++D ND Sbjct: 245 YGLWNSARERIAAHLGHPVSLEIEPGRFLVAEAGVLIAQVRAVKNMGRRHYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH I + I + GP+CE+GD RK+ Sbjct: 305 LMRPAMYGSYHHISVLPADGRSLANEPLIDTVVAGPLCESGDVFTQEAGGGLETRKLPAA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L TGAYGA S YNSR L+PE++ Q +IR R T +ELI L+ I Sbjct: 365 NIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIALELI 420 >gi|238783697|ref|ZP_04627717.1| Diaminopimelate decarboxylase [Yersinia bercovieri ATCC 43970] gi|238715410|gb|EEQ07402.1| Diaminopimelate decarboxylase [Yersinia bercovieri ATCC 43970] Length = 420 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 109/416 (26%), Positives = 172/416 (41%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + FD ++ +A KA SN +++ + G Sbjct: 16 NLIALPERFGCPVWAYDGDIITQRINQLR-HFD----VIRFAQKACSNIHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + + T D +D A + + + + + Sbjct: 71 KVDSVSLGEIERALIAGFQP-GQEPAEIVFTADLLDQATLLRVTELAIPVNAGSIDMLDQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI + + Sbjct: 130 LGQQAPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYQDLPQAIEKIAQYG-----LT 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I I + ++ + +Q+ + G +I I GGGL I Y + Y Sbjct: 185 LVGIHMHIGSGVDYQHLEQVCDAMVEQVVTLGQDISAISAGGGLSIPYQFGDDEIDTEHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + +EPGRFLVA+ G+L+ +V ++K+ + +V++D ND Sbjct: 245 YGLWNSARERIAAHLGHPVSLEIEPGRFLVAESGVLIAQVRAVKEMGSRHYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH I I + GP+CE+GD R + Sbjct: 305 LMRPAMYGSYHHISLLPADGRSLSAEPLIETVVGGPLCESGDVFTQEAGGGLETRPLPAA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 R GD L TGAYGA S YNSR L+PE++ Q +IR R T +ELI L+ + Sbjct: 365 RIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIALELV 420 >gi|123443530|ref|YP_001007503.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090491|emb|CAL13360.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 420 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 116/416 (27%), Positives = 180/416 (43%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + FD ++ +A KA SN +++ + G Sbjct: 16 NLIALPERFGCPVWAYDGEIITQKINQLR-HFD----VIRFAQKACSNIHILRLMHEQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + + T D +D A + ++ + + + Sbjct: 71 KVDSVSLGEIERALQAGFQP-GQEPAEIVFTADLLDQATLLRVTELSIPVNAGSIDMLDQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI + A K+ G+ Sbjct: 130 LGQHASGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIAKIQQYGL-KLVGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + ++ + QQ+ + G +I I GGGL I Y + Y Sbjct: 189 HMHIGSGV----DYQHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + +EPGRFLVA+ G+L+ +V ++K + +V++D ND Sbjct: 245 YGLWNSARERIAAHLGHPVSLEIEPGRFLVAEAGVLIAQVRAVKNMGRRHYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH I + I + GP+CE+GD RK+ Sbjct: 305 LMRPAMYGSYHHISVLPANGRSLANEPLIDTVVAGPLCESGDVFTQEAGGGLETRKLPAA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L TGAYGA S YNSR L+PE++ Q +IR R T +E+I L+ I Sbjct: 365 NIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEEIIALELI 420 >gi|331654321|ref|ZP_08355321.1| diaminopimelate decarboxylase [Escherichia coli M718] gi|331047703|gb|EGI19780.1| diaminopimelate decarboxylase [Escherichia coli M718] Length = 420 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAARQQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRTLPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|300815742|ref|ZP_07095966.1| diaminopimelate decarboxylase [Escherichia coli MS 107-1] gi|300531671|gb|EFK52733.1| diaminopimelate decarboxylase [Escherichia coli MS 107-1] Length = 420 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL + Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCVAMVRQVIEFGQDLQAISAGGGLSVPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|209760938|gb|ACI78781.1| diaminopimelate decarboxylase [Escherichia coli] gi|320640486|gb|EFX10025.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. G5101] gi|320645732|gb|EFX14717.1| diaminopimelate decarboxylase [Escherichia coli O157:H- str. 493-89] gi|320651032|gb|EFX19472.1| diaminopimelate decarboxylase [Escherichia coli O157:H- str. H 2687] gi|320667122|gb|EFX34085.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. LSU-61] Length = 420 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIA------ 352 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 353 -LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VEPRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|288550358|ref|ZP_05970120.2| diaminopimelate decarboxylase [Enterobacter cancerogenus ATCC 35316] gi|288315601|gb|EFC54539.1| diaminopimelate decarboxylase [Enterobacter cancerogenus ATCC 35316] Length = 431 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 121/423 (28%), Positives = 194/423 (45%), Gaps = 29/423 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L+A+N L +L P + Y I + FD +V +A KA SN + Sbjct: 20 DTDLNADN--LLRLPAEFGCPVWVYDAQIIREKIAALHQ-FD----VVRFAQKACSNIHI 72 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + ++ ++ Sbjct: 73 LRLMREQGVKVDSVSLGEIERALAAGFDPQ-SDSDAIVFTADLIDDATLARVHELHIPVN 131 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + ++ + + RVNP +K +TG + K GI + + Sbjct: 132 AGSVDMLEQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHGDLPAALEVLQR 191 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 K+ G+ MHIGS + + ++ + Q+ + G +++ I GGGL I Y Sbjct: 192 YGL-KLVGIHMHIGSGV----DYGHLEQVCGAMVDQVLACGQDLEAISAGGGLSIPYREG 246 Query: 248 HRPPSSSDY------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + Y A K+ +EPGRFLVA+ G+LV +V S+K+ + F Sbjct: 247 EEAIDTDHYYGLWSAARDKIAAHLGHAVKLEIEPGRFLVAESGVLVAQVRSVKEMGSRHF 306 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP++Y +YH I + D + + GP+CE+GD Sbjct: 307 VLIDAGFNDLMRPSMYGSYHHITALAADGRDLLNAPRVETVVAGPLCESGDVFTQQEGGK 366 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 R + +PGD L + TGAYGA S YNSR L+PE++ + +IR R T QEL+ Sbjct: 367 VETRTLPEVKPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDRGVARLIRRRQTIQELL 426 Query: 412 ELD 414 L+ Sbjct: 427 ALE 429 >gi|197284248|ref|YP_002150120.1| diaminopimelate decarboxylase [Proteus mirabilis HI4320] gi|194681735|emb|CAR40899.1| diaminopimelate decarboxylase [Proteus mirabilis HI4320] Length = 414 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 105/414 (25%), Positives = 180/414 (43%), Gaps = 27/414 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +LA TP + Y I ++ AFD +V +A KA SN +++ + G Sbjct: 10 LSQLAQTYGTPLWIYQGETISEHIEQLK-AFD----VVRFAQKACSNIHILRLMKQQGVK 64 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ RAL A R + + ++ + ++ + + ++ Sbjct: 65 VDSVSLGEIERALVAGFQGGRERSEIIFTADLLDEKTIER-VVELDIPVNAGSIDMLRQL 123 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + R+NP +K +TG + K GI + A + + Sbjct: 124 GERHQGHAVWIRINPGFGHGHSQKTNTGGENSKHGIWYEDVPEALAVINQY-----NLSL 178 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + I + + + +Q+ ++ +I+ I GGGL Y + + Y Sbjct: 179 VGFHMHIGSGVDYQHLASVCDAMVEQVLTSNVDIKAISAGGGLSTPYQQGDKRVDLNHYF 238 Query: 258 SLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 SL ++ +EPGRFLVA+ G+LV++V ++K ++ +V++D +D Sbjct: 239 SLWDSARQRIAQHLGHDIELEIEPGRFLVAESGVLVSQVRAVKSMGNRHYVLVDAGFSDL 298 Query: 312 MRPTLYDAYHEINYIVNP---AGDRLHIHADIVGPICETGDFIALN-------RKIALPR 361 MRP +Y +YH+I + + GP+CE+GD R + Sbjct: 299 MRPAMYGSYHQITLLDKYGQLKSSEFQQETIVAGPLCESGDVFTQQEGGMVAPRLLPPAE 358 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD L I TGAYGA S YNSR LIPE++++ +IR R T +EL+ L+ Sbjct: 359 VGDYLVIHDTGAYGASMSSNYNSRPLIPEVLISQGIPQLIRRRQTIEELLALEI 412 >gi|289829292|ref|ZP_06546904.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 420 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 123/433 (28%), Positives = 191/433 (44%), Gaps = 30/433 (6%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + +D VS GE+ RALAA + + T D ID A + + Sbjct: 54 KACSNIHILRLMRAQDVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++ + + + + + RVNP +K +TG + K GI + Sbjct: 113 SELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ K + I I + ++ + +Q+ G +++ I GGG Sbjct: 173 -----AALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I YH P + Y L + K+ +EPGR+LVA G+LVT+V S+ Sbjct: 228 LSIPYHEGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRYLVAQSGVLVTQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 288 KQMGSRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR Sbjct: 348 FTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T +EL+ L+ + Sbjct: 408 RQTIEELLALEML 420 >gi|325282109|ref|YP_004254651.1| diaminopimelate decarboxylase [Odoribacter splanchnicus DSM 20712] gi|324313918|gb|ADY34471.1| diaminopimelate decarboxylase [Odoribacter splanchnicus DSM 20712] Length = 381 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 139/378 (36%), Positives = 213/378 (56%), Gaps = 6/378 (1%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L ++ TPFY Y+ ++K + V YA+KAN+N +++ ++ G G Sbjct: 3 LSQIPVQTPTPFYYYNLELLKKTVQAAKSESAPYGYRVHYAVKANANPVLLRLISQQGLG 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D VS E+R+AL PA+ IV++GVGK+ EI+LALQ I+CFN ES E++ ++ A Sbjct: 63 ADCVSGNEIRQALECGFPADTIVYAGVGKSDAEIELALQHDIFCFNCESLPEIQVIDGIA 122 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 LGKKA IA R+NP+++A+TH I+TG +E+KFGI ++ + + + L +++ G+ Sbjct: 123 ARLGKKARIALRINPNVDAHTHHYITTGIEENKFGIYLYDLEHVITEVAKLKQIELIGLH 182 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP---SSS 254 HIGSQI + F ++ +Q++ G + HI+ GGGLGI Y+ + P S Sbjct: 183 FHIGSQITDMTVFRGLCIRANEIQRQMKERGLFLPHINFGGGLGIDYNEPYEKPIADFQS 242 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 +A+ + +I E GR +VA G L++KV+ +K+ ++ FVILD MND +RP Sbjct: 243 YFATFARFFEPEPHQQIHFELGRSIVAHCGDLISKVLYVKEGKNRKFVILDAGMNDLLRP 302 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 LY A+H I N + DR D+VGPICE+ D + + R GDL+ I GAY Sbjct: 303 ALYQAFH---KIENISSDRPEEKYDVVGPICESADCFGKDVVLNETRRGDLIAIHSCGAY 359 Query: 375 GAVQSGTYNSRLLIPEIM 392 G + YN R L + Sbjct: 360 GEAMASRYNLRDLPGSVF 377 >gi|311898369|dbj|BAJ30777.1| putative diaminopimelate decarboxylase [Kitasatospora setae KM-6054] Length = 463 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 111/406 (27%), Positives = 183/406 (45%), Gaps = 12/406 (2%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA TP Y + G V YA KA ++AV++ L G +D+ Sbjct: 58 LAAEFGTPAYVMDEAD-FRARARAWRDAFGAGADVYYAGKAFLSKAVVRWLHEEGLNVDV 116 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S GEL ALAA +P ERI G K++ E++ A+++G+ V+S E++ L A + Sbjct: 117 CSSGELHVALAAGMPGERIALHGNNKSVGELEQAVKAGVGHIVVDSFQEIERLAAIADAQ 176 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL--PGVKISGVDM 198 G + P+ R+ + A+TH+ I+T ++ KFG+ + + A L P +++ G+ Sbjct: 177 GVRQPVLIRITVGVEAHTHEFIATAHEDQKFGLSLSGGLAAEAVRRVLARPSLELRGIHS 236 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 HIGSQI F A + + L ++R + ID+GGGLGIAY ++ P ++ A Sbjct: 237 HIGSQIFDFAGFEVAARRVVGLLAEVRDEHGVELPEIDLGGGLGIAYTAEDDPREPAEIA 296 Query: 258 SLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + + +I +EPGR +V + +V ++K + Sbjct: 297 ASLTDIVRRECAAAELTPPRISVEPGRAIVGPTAFTLYEVGTVKALEGLRTYVSVDGGMS 356 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIE 369 T +V+ + A +VG CE+GD + + + PGDL+ + Sbjct: 357 DNIRTALYDAEYSVALVSRTSAAEPMLARVVGKHCESGDIVVKDAFLPADLAPGDLIAVP 416 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 TGAY + YN L P + V +I R T ++L+ LD Sbjct: 417 ATGAYCRSMASNYNHALKPPVLAVADGAARVIVRRETEEDLLRLDI 462 >gi|74313409|ref|YP_311828.1| diaminopimelate decarboxylase [Shigella sonnei Ss046] gi|157157020|ref|YP_001464173.1| diaminopimelate decarboxylase [Escherichia coli E24377A] gi|260856951|ref|YP_003230842.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O26:H11 str. 11368] gi|260869518|ref|YP_003235920.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O111:H- str. 11128] gi|300820628|ref|ZP_07100779.1| diaminopimelate decarboxylase [Escherichia coli MS 119-7] gi|331678817|ref|ZP_08379491.1| diaminopimelate decarboxylase [Escherichia coli H591] gi|73856886|gb|AAZ89593.1| diaminopimelate decarboxylase [Shigella sonnei Ss046] gi|157079050|gb|ABV18758.1| diaminopimelate decarboxylase [Escherichia coli E24377A] gi|257755600|dbj|BAI27102.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O26:H11 str. 11368] gi|257765874|dbj|BAI37369.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O111:H- str. 11128] gi|300526892|gb|EFK47961.1| diaminopimelate decarboxylase [Escherichia coli MS 119-7] gi|320656528|gb|EFX24424.1| diaminopimelate decarboxylase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662047|gb|EFX29448.1| diaminopimelate decarboxylase [Escherichia coli O55:H7 str. USDA 5905] gi|323154816|gb|EFZ41010.1| diaminopimelate decarboxylase [Escherichia coli EPECa14] gi|323167952|gb|EFZ53642.1| diaminopimelate decarboxylase [Shigella sonnei 53G] gi|323180275|gb|EFZ65827.1| diaminopimelate decarboxylase [Escherichia coli 1180] gi|331073647|gb|EGI44968.1| diaminopimelate decarboxylase [Escherichia coli H591] Length = 420 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|119960514|ref|YP_948333.1| diaminopimelate decarboxylase [Arthrobacter aurescens TC1] gi|119947373|gb|ABM06284.1| diaminopimelate decarboxylase [Arthrobacter aurescens TC1] Length = 490 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 113/446 (25%), Positives = 185/446 (41%), Gaps = 41/446 (9%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------DTMVCYALKAN 62 G + + VS+ +L TP + S + F +AFD V YA K+ Sbjct: 40 GEVTIDGVSVSELKEQYGTPLFVMSESDFRARARAFKDAFDAAFADICGGVDVYYAGKSF 99 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 AV +A G LD S GEL A A + + G K+ EI+ AL + Sbjct: 100 LCTAVASWVAEEGLRLDTCSGGELAVAARAGIEGPNLGLHGNNKSDAEINRALDMLLGRI 159 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP-------- 174 V+S EL+ + + A S G+ A + R+ P ++A+TH+ I+T ++ KFG+ Sbjct: 160 VVDSLDELERVAKIASSRGETAKVMLRLTPGVHAHTHEFIATAHEDQKFGLSMAEDSTEE 219 Query: 175 --IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-DLTQQLRSNGHNI 231 + A A++ +++ G+ HIGSQI + + F A + L L + Sbjct: 220 AGLSAAEEAVAAATSYASIELLGLHCHIGSQIFEPDGFAVAAEKLLGFLAAMQAKYSIVM 279 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVG 284 +D+GGG GIAY P +++ A + + +I +EPGR +V Sbjct: 280 PELDLGGGYGIAYTPVDTPRPAAEIAQAMADVVRSKCAELDITPPRISIEPGRAIVGSTT 339 Query: 285 ILVTKVIS---------------IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNP 329 + +V + + + +V +D M+D RP LYDA + Sbjct: 340 FTLYEVGTLKTVRVDAPEGEETQENVTYPRRYVSVDGGMSDNARPVLYDADYSAILASRN 399 Query: 330 AGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + + +VG CE+GD + + + GDLL + TGAY S YN Sbjct: 400 SSAAPQ-LSRVVGKHCESGDIVVRDVYLPADVAAGDLLAVPGTGAYCWALSSNYNYLARP 458 Query: 389 PEIMVNGSQFHIIRPRMTFQELIELD 414 + V +I T ++L+ D Sbjct: 459 GVVAVRDGAARLIVRGETEEDLLNRD 484 >gi|160902683|ref|YP_001568264.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95] gi|160360327|gb|ABX31941.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95] Length = 413 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 99/403 (24%), Positives = 162/403 (40%), Gaps = 16/403 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L L VQTPFY Y I T +AF D +A+KA N ++K G G Sbjct: 15 LNNLLKSVQTPFYLYDEKGIRNRIKTLKDAFSWADFKEFFAVKATPNPNILKITKEEGCG 74 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D S EL A + I+F+ + E + AL + + Sbjct: 75 VDCSSMAELVAAEKSGFVNNEILFTSNDTPLQEYEKALSLNAILNLDDVSHIDLLKEKYK 134 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + ++ R NP + +I KE KFG+P + + +A + Sbjct: 135 LPDL----VSIRYNPGGDFG--NEIIGNLKESKFGVPKKDLINGFARLKDYGVKRFGLHA 188 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 M I ++++ A L + + + + I++GGG GI Y + + Sbjct: 189 MLISNELNPQNIIKVAQFLFETAVEVNKKLVIDFEFINLGGGFGIPYKPEETELDIYYIS 248 Query: 258 SLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 I + + N KI +E GR++ G L+TKV+ IK+S K + +D + Sbjct: 249 RQIKKLYENVLLENGLKPPKIYMEHGRYITGPNGYLITKVLHIKES-YKKYAGIDANSAN 307 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 +RP +Y AYH ++N D D+VG +CE D +A +R + + GD+L Sbjct: 308 LLRPAMYKAYHH-ITVLNKNSDEKTELYDVVGSLCENNDKLATDRLLPELKRGDVLVFHD 366 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQF-HIIRPRMTFQELIE 412 GA+G YN +L E + + +IR T + Sbjct: 367 VGAHGYSMGYNYNGKLRSAEYLFTKDRAFKMIRRAETLDDYFA 409 >gi|39654106|pdb|1KNW|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase gi|39654107|pdb|1KO0|A Chain A, Crystal Structure Of A D,L-Lysine Complex Of Diaminopimelate Decarboxylase Length = 425 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL + Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|16130742|ref|NP_417315.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. MG1655] gi|89109621|ref|AP_003401.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. W3110] gi|157162291|ref|YP_001459609.1| diaminopimelate decarboxylase [Escherichia coli HS] gi|170018919|ref|YP_001723873.1| diaminopimelate decarboxylase [Escherichia coli ATCC 8739] gi|170082406|ref|YP_001731726.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. DH10B] gi|188494453|ref|ZP_03001723.1| diaminopimelate decarboxylase [Escherichia coli 53638] gi|191166012|ref|ZP_03027848.1| diaminopimelate decarboxylase [Escherichia coli B7A] gi|193071432|ref|ZP_03052346.1| diaminopimelate decarboxylase [Escherichia coli E110019] gi|194439964|ref|ZP_03072024.1| diaminopimelate decarboxylase [Escherichia coli 101-1] gi|209920286|ref|YP_002294370.1| diaminopimelate decarboxylase [Escherichia coli SE11] gi|218555387|ref|YP_002388300.1| diaminopimelate decarboxylase [Escherichia coli IAI1] gi|218696434|ref|YP_002404101.1| diaminopimelate decarboxylase [Escherichia coli 55989] gi|238901974|ref|YP_002927770.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli BW2952] gi|253772307|ref|YP_003035138.1| diaminopimelate decarboxylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037891|ref|ZP_04871949.1| diaminopimelate decarboxylase [Escherichia sp. 1_1_43] gi|254162766|ref|YP_003045874.1| diaminopimelate decarboxylase [Escherichia coli B str. REL606] gi|293449162|ref|ZP_06663583.1| diaminopimelate decarboxylase [Escherichia coli B088] gi|297518158|ref|ZP_06936544.1| diaminopimelate decarboxylase [Escherichia coli OP50] gi|300906633|ref|ZP_07124322.1| diaminopimelate decarboxylase [Escherichia coli MS 84-1] gi|300920304|ref|ZP_07136743.1| diaminopimelate decarboxylase [Escherichia coli MS 115-1] gi|300931304|ref|ZP_07146643.1| diaminopimelate decarboxylase [Escherichia coli MS 187-1] gi|300950577|ref|ZP_07164482.1| diaminopimelate decarboxylase [Escherichia coli MS 116-1] gi|300958158|ref|ZP_07170315.1| diaminopimelate decarboxylase [Escherichia coli MS 175-1] gi|301026182|ref|ZP_07189650.1| diaminopimelate decarboxylase [Escherichia coli MS 196-1] gi|301302976|ref|ZP_07209103.1| diaminopimelate decarboxylase [Escherichia coli MS 124-1] gi|301645193|ref|ZP_07245146.1| diaminopimelate decarboxylase [Escherichia coli MS 146-1] gi|307139522|ref|ZP_07498878.1| diaminopimelate decarboxylase [Escherichia coli H736] gi|307310551|ref|ZP_07590199.1| diaminopimelate decarboxylase [Escherichia coli W] gi|309793887|ref|ZP_07688312.1| diaminopimelate decarboxylase [Escherichia coli MS 145-7] gi|331643524|ref|ZP_08344655.1| diaminopimelate decarboxylase [Escherichia coli H736] gi|331669571|ref|ZP_08370417.1| diaminopimelate decarboxylase [Escherichia coli TA271] gi|118303|sp|P00861|DCDA_ECOLI RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|455170|gb|AAA83861.1| diaminopimelate decarboxylase [Escherichia coli] gi|882731|gb|AAB40485.1| diaminopimelate decarboxylase [Escherichia coli str. K-12 substr. MG1655] gi|1789203|gb|AAC75877.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. MG1655] gi|85675654|dbj|BAE76907.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str. K12 substr. W3110] gi|157067971|gb|ABV07226.1| diaminopimelate decarboxylase [Escherichia coli HS] gi|169753847|gb|ACA76546.1| diaminopimelate decarboxylase [Escherichia coli ATCC 8739] gi|169890241|gb|ACB03948.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str. K-12 substr. DH10B] gi|188489652|gb|EDU64755.1| diaminopimelate decarboxylase [Escherichia coli 53638] gi|190903960|gb|EDV63673.1| diaminopimelate decarboxylase [Escherichia coli B7A] gi|192955249|gb|EDV85738.1| diaminopimelate decarboxylase [Escherichia coli E110019] gi|194421113|gb|EDX37140.1| diaminopimelate decarboxylase [Escherichia coli 101-1] gi|209913545|dbj|BAG78619.1| diaminopimelate decarboxylase [Escherichia coli SE11] gi|218353166|emb|CAU99032.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli 55989] gi|218362155|emb|CAQ99764.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli IAI1] gi|226839515|gb|EEH71536.1| diaminopimelate decarboxylase [Escherichia sp. 1_1_43] gi|238860758|gb|ACR62756.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli BW2952] gi|242378386|emb|CAQ33164.1| diaminopimelate decarboxylase [Escherichia coli BL21(DE3)] gi|253323351|gb|ACT27953.1| diaminopimelate decarboxylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974667|gb|ACT40338.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli B str. REL606] gi|253978832|gb|ACT44502.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli BL21(DE3)] gi|260448113|gb|ACX38535.1| diaminopimelate decarboxylase [Escherichia coli DH1] gi|291322252|gb|EFE61681.1| diaminopimelate decarboxylase [Escherichia coli B088] gi|299879809|gb|EFI88020.1| diaminopimelate decarboxylase [Escherichia coli MS 196-1] gi|300315180|gb|EFJ64964.1| diaminopimelate decarboxylase [Escherichia coli MS 175-1] gi|300401534|gb|EFJ85072.1| diaminopimelate decarboxylase [Escherichia coli MS 84-1] gi|300412687|gb|EFJ95997.1| diaminopimelate decarboxylase [Escherichia coli MS 115-1] gi|300450105|gb|EFK13725.1| diaminopimelate decarboxylase [Escherichia coli MS 116-1] gi|300460888|gb|EFK24381.1| diaminopimelate decarboxylase [Escherichia coli MS 187-1] gi|300841640|gb|EFK69400.1| diaminopimelate decarboxylase [Escherichia coli MS 124-1] gi|301076463|gb|EFK91269.1| diaminopimelate decarboxylase [Escherichia coli MS 146-1] gi|306909446|gb|EFN39941.1| diaminopimelate decarboxylase [Escherichia coli W] gi|308122294|gb|EFO59556.1| diaminopimelate decarboxylase [Escherichia coli MS 145-7] gi|309703193|emb|CBJ02527.1| diaminopimelate decarboxylase [Escherichia coli ETEC H10407] gi|315062145|gb|ADT76472.1| diaminopimelate decarboxylase, PLP-binding protein [Escherichia coli W] gi|315137442|dbj|BAJ44601.1| diaminopimelate decarboxylase [Escherichia coli DH1] gi|315256700|gb|EFU36668.1| diaminopimelate decarboxylase [Escherichia coli MS 85-1] gi|315615226|gb|EFU95863.1| diaminopimelate decarboxylase [Escherichia coli 3431] gi|323183383|gb|EFZ68780.1| diaminopimelate decarboxylase [Escherichia coli 1357] gi|323377275|gb|ADX49543.1| diaminopimelate decarboxylase [Escherichia coli KO11] gi|323935802|gb|EGB32105.1| diaminopimelate decarboxylase [Escherichia coli E1520] gi|323941552|gb|EGB37733.1| diaminopimelate decarboxylase [Escherichia coli E482] gi|323946526|gb|EGB42550.1| diaminopimelate decarboxylase [Escherichia coli H120] gi|323960718|gb|EGB56341.1| diaminopimelate decarboxylase [Escherichia coli H489] gi|323971632|gb|EGB66862.1| diaminopimelate decarboxylase [Escherichia coli TA007] gi|324016306|gb|EGB85525.1| diaminopimelate decarboxylase [Escherichia coli MS 117-3] gi|324119878|gb|EGC13757.1| diaminopimelate decarboxylase [Escherichia coli E1167] gi|331036995|gb|EGI09219.1| diaminopimelate decarboxylase [Escherichia coli H736] gi|331063239|gb|EGI35152.1| diaminopimelate decarboxylase [Escherichia coli TA271] gi|332344729|gb|AEE58063.1| diaminopimelate decarboxylase LysA [Escherichia coli UMNK88] Length = 420 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL + Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|323966820|gb|EGB62251.1| diaminopimelate decarboxylase [Escherichia coli M863] gi|327251586|gb|EGE63272.1| diaminopimelate decarboxylase [Escherichia coli STEC_7v] Length = 420 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 110/416 (26%), Positives = 171/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RAL A + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALVAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALELIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + + I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GVHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALASDGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|323160019|gb|EFZ45983.1| diaminopimelate decarboxylase [Escherichia coli E128010] Length = 420 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 110/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D I+ A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIEQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGLVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL + Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|281414194|ref|ZP_06245936.1| diaminopimelate decarboxylase [Micrococcus luteus NCTC 2665] Length = 490 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 116/453 (25%), Positives = 184/453 (40%), Gaps = 40/453 (8%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------DTMVCYALKA 61 +G L + + LA TP F FD V YA K+ Sbjct: 40 DGELTVQGLRASALAAEFGTPLLVVDEDDFRARARAFREGFDAAFADLCGGADVYYAGKS 99 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + + A G +D S GEL ALA V I G K+ E+ AL++G+ Sbjct: 100 MLTLSTARWAAEEGLRVDTASGGELAIALATGVYPAHIGLHGNNKSDAELRTALEAGVGR 159 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V+S EL L A G +AP+ R+ P ++A+TH I+T ++ KFG+ + + Sbjct: 160 IIVDSLDELTHLAALAAEAGHRAPVMLRLTPGVHAHTHDFIATAHEDQKFGLSLAPASTD 219 Query: 182 YA--------------YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 A + + GV HIGSQI + E F A + + ++++ Sbjct: 220 RDGNVAGRSPAAVAVDTALATESIDLLGVHCHIGSQIFEAEGFGLAAGRVLEFLAEVKAE 279 Query: 228 GHNIQ-HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFL 279 +D+GGG GIAY + P +++ A + ++ LEPGR + Sbjct: 280 HGVELAELDLGGGHGIAYTAVDEPRPAAEIADALADDVQKTVERLGLRCPRVSLEPGRAI 339 Query: 280 VADVGILVTKVISIKKSAD---------KTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 G+ + V K + +V +D M+D RP LYDA + Sbjct: 340 SGPAGLTLYTVGVTKTVDADAPDGGTAARRYVAVDGGMSDNPRPVLYDADY-TAVSARRT 398 Query: 331 GDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIP 389 + + +VG CE+GD + + + GDLL + TGAY V S YN+ Sbjct: 399 SEAEPALSRVVGKHCESGDILVRDVYLPADLGRGDLLAVPATGAYTHVMSSNYNALARPA 458 Query: 390 EIMVNGSQFHIIRPRMTFQELIELDSIPAWLQK 422 + V+G +I R T ++L ++ P L + Sbjct: 459 VVAVSGGLARVIIRRETQEDLFAREADP-RLAR 490 >gi|291284165|ref|YP_003500983.1| Diaminopimelate decarboxylase [Escherichia coli O55:H7 str. CB9615] gi|209760944|gb|ACI78784.1| diaminopimelate decarboxylase [Escherichia coli] gi|290764038|gb|ADD57999.1| Diaminopimelate decarboxylase [Escherichia coli O55:H7 str. CB9615] Length = 420 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWCTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|333000921|gb|EGK20491.1| diaminopimelate decarboxylase [Shigella flexneri K-272] Length = 420 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + F+ +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FE----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLECVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 YHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|313499803|gb|ADR61169.1| LysA [Pseudomonas putida BIRD-1] Length = 410 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 115/411 (27%), Positives = 178/411 (43%), Gaps = 25/411 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L + +P + Y T I N FD V +A KAN N V++ + G Sbjct: 8 LAEAVRQHGSPLWAYDTRTIADRVKQL-NVFD----TVRFAQKANPNLHVLRLMRAHGLV 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD VS GE+ RA AA + +GV T D +D + +E + + ++ Sbjct: 63 LDAVSLGEMERAFAAGASVDGD-PAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLRQL 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP +K +TG + K GI ++ A Sbjct: 122 GERSPGHRVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHG-----LHL 176 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + I + ++ R + + + G +I+ +GGGL Y S +P YA Sbjct: 177 VGVHMHIGSGVDYQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRSTDKPVDLQRYA 236 Query: 258 SLIH------QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + ++ +EPGRFLVA+ G LV +V ++K+ TFV++D ND Sbjct: 237 QTWAVARKEIEAMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVMIDAGFNDL 296 Query: 312 MRPTLYDAYHEIN--YIVNPAGDRLHIHADIVGPICETGDFIALN------RKIALPRPG 363 MRP +Y AYH + A DR + GP+CE+GD + + + + G Sbjct: 297 MRPAMYGAYHGMTLLDADGQAVDRPRQPTVVAGPLCESGDVFTQDDQALTPQDLPQAQVG 356 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 DLL I GAYGA S YNSR L+PE ++ +IR R T Q+L+ L+ Sbjct: 357 DLLVIHDAGAYGASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLSLE 407 >gi|323978545|gb|EGB73627.1| diaminopimelate decarboxylase [Escherichia coli TW10509] Length = 420 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 171/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RAL A + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALVAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVLEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALASDGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|320182254|gb|EFW57157.1| Diaminopimelate decarboxylase [Shigella boydii ATCC 9905] gi|332087341|gb|EGI92469.1| diaminopimelate decarboxylase [Shigella boydii 5216-82] gi|332999594|gb|EGK19179.1| diaminopimelate decarboxylase [Shigella flexneri VA-6] Length = 420 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + F+ +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FE----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|291543687|emb|CBL16796.1| Diaminopimelate decarboxylase [Ruminococcus sp. 18P13] Length = 419 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 95/404 (23%), Positives = 146/404 (36%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 +E++A TPFY Y I +N AF +A+KA N ++K L G Sbjct: 11 VERIAAQYPTPFYLYDEKGIRENARKLKQAFAWNKGYREYFAVKATPNPFILKILQEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + A I+FS ++ LA + G Y + Sbjct: 71 GVDCSSLTELMMSEACGFSGSDIMFSSNVTPAEDFKLAKKLGAYINLDDITHIDFLEQ-- 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G I R NP + + E K+G Q+ + Sbjct: 129 --VAGLPETIFCRYNPGGHFEIETHVMDNPGEAKYGFTTQQLIDGFKILMQKGVKHFGLH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G +I+ +++ GG+GI Y + P Sbjct: 187 AFLASNTVTNAYYPKLARVLFETAVMLKKETGADIRFVNLSGGVGIPYRPEQEPNDILAI 246 Query: 257 ASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q F + I E GRF++ G L+TK + K + + A N Sbjct: 247 GEGVRQAFEEIMVPAGLGDVAIFTELGRFMLGPYGNLITKAVHEKHIYKEYIGVDACAAN 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I + H D+ G +CE D A++R + GD L I Sbjct: 307 LM-RPAIYGAYHHITVLGKENAPCDH-KYDVTGGLCENNDKFAVDRMLPKIDMGDYLAIH 364 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+G YN +L EI++ F +IR T + Sbjct: 365 DAGAHGFSMGYNYNGKLRSAEILLCEDGSFKLIRRAETPADYFA 408 >gi|256019366|ref|ZP_05433231.1| diaminopimelate decarboxylase [Shigella sp. D9] gi|332280484|ref|ZP_08392897.1| diaminopimelate decarboxylase [Shigella sp. D9] gi|332102836|gb|EGJ06182.1| diaminopimelate decarboxylase [Shigella sp. D9] Length = 420 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 113/416 (27%), Positives = 173/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++DV ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDVGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|116512127|ref|YP_809343.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. cremoris SK11] gi|116107781|gb|ABJ72921.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. cremoris SK11] Length = 419 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 152/404 (37%), Gaps = 13/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y I + AF +A+KA A++K L G Sbjct: 11 LEQITAEYPTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + ++FS +E A Q G E + Sbjct: 71 GVDCASYIELLLSEKCGFDGTEMMFSSNDTPAEEFQFANQLGATINLDA--YEHIEFLKN 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 ++ R NP KI +E KFG+ Q+ L + Sbjct: 129 LPDFVFPNTMSLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKEFGMH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A KL + + G + I++ GG+G+ Y D + Sbjct: 189 SFLASNTVTNDYYPELARKLFELALEIRQETGVTLDFINLSGGIGVNYRPDEEANDIAKI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + KI E GRF++A G L+TKV+ +K + +V +D + Sbjct: 249 GQGVHKAYEEVLTANGIENLKIYTELGRFMLAPHGHLITKVLHLK-ETYRKYVGVDASAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP YDAYH I + DI G +CE D A R + GDLL I Sbjct: 308 NLMRPAFYDAYHHITVAGKEKQEA-TETYDITGSLCENNDKFAKERAFPEIKVGDLLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ + +IR + Sbjct: 367 DTGAHGFSMGYQYNAKLRSAEILLQEDGKTRLIRRAENPADYFA 410 >gi|330839873|ref|YP_004414453.1| Diaminopimelate decarboxylase [Selenomonas sputigena ATCC 35185] gi|329747637|gb|AEC00994.1| Diaminopimelate decarboxylase [Selenomonas sputigena ATCC 35185] Length = 422 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 106/416 (25%), Positives = 165/416 (39%), Gaps = 16/416 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLG 75 LE++ TPF+ Y AI +N+ F AF + +A+KA N +++ L G Sbjct: 12 RLEEIIEQYPTPFHIYDEKAIRENFRRFKRAFSWAPNFTEHFAVKAAPNPRLLQILHEEG 71 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G D S EL + AA + E I+ + +E A + G + + Sbjct: 72 AGTDCSSIAELLLSEAAGIKGEEIMLTSNDTPAEEFQKARELGAIINLDDISHIDYL--E 129 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + P I I E K+G+ HQI Y A + Sbjct: 130 KCAGFPDCLSFRYNPGPLIEG---NDIIGKPTEAKYGLTHHQIFDAYKIAREKGVKRFGL 186 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 M I S++ A + + + G +++ +++GGG GI Y + Sbjct: 187 HTMVISSELRNEAFLFTAELMFNLAVEIKKRLGISLEFVNLGGGFGIPYRPEEEAIDVER 246 Query: 256 YASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 S I + + I E GR++ G LVT + KK+ K ++ LD M Sbjct: 247 VGSGIEALYKKIIEPAGLAGLAIKAESGRYITGPYGWLVTTALHEKKT-YKDYIGLDACM 305 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 + MRP LY AYH I + HI DI G +CE D A++RK+ GD + I Sbjct: 306 ANLMRPALYGAYHHITVVGKEDAFCDHI-YDITGSLCENNDKFAIDRKLPKIDIGDRIVI 364 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIELDSIPAWLQKT 423 TGA+G YN +L E+++ +IR T + IP L K Sbjct: 365 HDTGAHGHAMGFNYNGKLRSAELLLREDGSVELIRRAETLGDYFATLDIPGGLMKP 420 >gi|311278213|ref|YP_003940444.1| diaminopimelate decarboxylase [Enterobacter cloacae SCF1] gi|308747408|gb|ADO47160.1| diaminopimelate decarboxylase [Enterobacter cloacae SCF1] Length = 420 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 120/423 (28%), Positives = 185/423 (43%), Gaps = 29/423 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + G +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAQL-----GRFDVVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYAPQTH-PDDIVFTADVIDEATIARVSELRIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + ++ P+ RVNP +K +TG + K GI + + A Sbjct: 121 AGSVDMLAQLGAVSPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYSDLPAALAVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 I I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 YGLNLI-----GIHMHIGSGVDYGHLEQVCGAMVRQVIDFGQDLQAISAGGGLSIPYREG 235 Query: 248 HRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + Y L + K+ +EPGRFLVA+ G+LV++V S+K+ + F Sbjct: 236 EEAIDTDHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAEAGVLVSQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + D + + GP+CE+GD Sbjct: 296 VLIDAGFNDLMRPAMYGSYHHITALAADGRDLTLAPLVETVVAGPLCESGDVFTQQEGGK 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 R + PGD L + TGAYGA S YNSR L+PE++ + +IR R T QEL+ Sbjct: 356 VETRALPQVAPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLYDNGSARLIRRRQTIQELL 415 Query: 412 ELD 414 L+ Sbjct: 416 ALE 418 >gi|170683211|ref|YP_001745007.1| diaminopimelate decarboxylase [Escherichia coli SMS-3-5] gi|170520929|gb|ACB19107.1| diaminopimelate decarboxylase [Escherichia coli SMS-3-5] Length = 420 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVLEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|332654112|ref|ZP_08419856.1| protein TabA [Ruminococcaceae bacterium D16] gi|332517198|gb|EGJ46803.1| protein TabA [Ruminococcaceae bacterium D16] Length = 419 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 90/406 (22%), Positives = 148/406 (36%), Gaps = 13/406 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I N AF +A+KA N ++K L G Sbjct: 11 LQEMVKTYPTPFHLYDEKGIRANARALRQAFAWNPGYTEYFAVKATPNPQILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + +I+FS +E LA + G + Sbjct: 71 GVDCSSLTELMMSDRCGFTGGQIMFSSNDTPAEEFALAAKLGATINLDDITHIDFLKETI 130 Query: 137 AVSLGKKAPIA--FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 K + V + ++ + K+G+ QI + + Sbjct: 131 GYIPKKISCRFNPGGVFRLGESKEGFQVMDNPGDAKYGMTPAQITEAFKRLKAEGAEEFG 190 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + A L + + G +I I++ GG+G+ Y D + Sbjct: 191 IHAFLASNTLSNDYYPALARILFQLAVKLKEETGAHITFINLSGGVGVPYRPDQTANDIA 250 Query: 255 DYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + + + + E GRF++A G LVTKV+ K + + + A Sbjct: 251 VIGEGVRKAYEEILVPAGMGDVALCTELGRFMLAPYGHLVTKVLHFKHTYKEYVGVDACA 310 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 N RP +Y AYH I + H D+ G +CE D A++R + GDLL Sbjct: 311 ANLM-RPAMYGAYHHITVMGKEDAPCDH-KYDVTGALCENNDKFAVDRMLPEIEIGDLLV 368 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 I TGA+G YN RL E+++ +IR T ++ Sbjct: 369 IHDTGAHGHAMGYQYNGRLRSAEVLLQEDGSTRLIRRAETPEDYFA 414 >gi|193063580|ref|ZP_03044669.1| diaminopimelate decarboxylase [Escherichia coli E22] gi|194426152|ref|ZP_03058707.1| diaminopimelate decarboxylase [Escherichia coli B171] gi|260845501|ref|YP_003223279.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O103:H2 str. 12009] gi|192930857|gb|EDV83462.1| diaminopimelate decarboxylase [Escherichia coli E22] gi|194415460|gb|EDX31727.1| diaminopimelate decarboxylase [Escherichia coli B171] gi|257760648|dbj|BAI32145.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O103:H2 str. 12009] gi|320202479|gb|EFW77049.1| Diaminopimelate decarboxylase [Escherichia coli EC4100B] Length = 420 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGLVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL + Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|110643006|ref|YP_670736.1| diaminopimelate decarboxylase [Escherichia coli 536] gi|218690964|ref|YP_002399176.1| diaminopimelate decarboxylase [Escherichia coli ED1a] gi|218701553|ref|YP_002409182.1| diaminopimelate decarboxylase [Escherichia coli IAI39] gi|218706332|ref|YP_002413851.1| diaminopimelate decarboxylase [Escherichia coli UMN026] gi|293406327|ref|ZP_06650253.1| diaminopimelate decarboxylase [Escherichia coli FVEC1412] gi|298382063|ref|ZP_06991660.1| diaminopimelate decarboxylase [Escherichia coli FVEC1302] gi|300898100|ref|ZP_07116466.1| diaminopimelate decarboxylase [Escherichia coli MS 198-1] gi|301027487|ref|ZP_07190824.1| diaminopimelate decarboxylase [Escherichia coli MS 69-1] gi|306812257|ref|ZP_07446455.1| diaminopimelate decarboxylase [Escherichia coli NC101] gi|331648599|ref|ZP_08349687.1| diaminopimelate decarboxylase [Escherichia coli M605] gi|331658986|ref|ZP_08359928.1| diaminopimelate decarboxylase [Escherichia coli TA206] gi|331664401|ref|ZP_08365307.1| diaminopimelate decarboxylase [Escherichia coli TA143] gi|331684482|ref|ZP_08385074.1| diaminopimelate decarboxylase [Escherichia coli H299] gi|110344598|gb|ABG70835.1| diaminopimelate decarboxylase [Escherichia coli 536] gi|218371539|emb|CAR19377.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli IAI39] gi|218428528|emb|CAR09455.2| diaminopimelate decarboxylase, PLP-binding [Escherichia coli ED1a] gi|218433429|emb|CAR14331.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli UMN026] gi|222034553|emb|CAP77295.1| Diaminopimelate decarboxylase [Escherichia coli LF82] gi|281179863|dbj|BAI56193.1| diaminopimelate decarboxylase [Escherichia coli SE15] gi|284922775|emb|CBG35863.1| diaminopimelate decarboxylase [Escherichia coli 042] gi|291426333|gb|EFE99365.1| diaminopimelate decarboxylase [Escherichia coli FVEC1412] gi|298277203|gb|EFI18719.1| diaminopimelate decarboxylase [Escherichia coli FVEC1302] gi|300358158|gb|EFJ74028.1| diaminopimelate decarboxylase [Escherichia coli MS 198-1] gi|300394995|gb|EFJ78533.1| diaminopimelate decarboxylase [Escherichia coli MS 69-1] gi|305854295|gb|EFM54733.1| diaminopimelate decarboxylase [Escherichia coli NC101] gi|312947390|gb|ADR28217.1| diaminopimelate decarboxylase [Escherichia coli O83:H1 str. NRG 857C] gi|315295748|gb|EFU55065.1| diaminopimelate decarboxylase [Escherichia coli MS 16-3] gi|330908891|gb|EGH37405.1| diaminopimelate decarboxylase [Escherichia coli AA86] gi|331042346|gb|EGI14488.1| diaminopimelate decarboxylase [Escherichia coli M605] gi|331053568|gb|EGI25597.1| diaminopimelate decarboxylase [Escherichia coli TA206] gi|331058332|gb|EGI30313.1| diaminopimelate decarboxylase [Escherichia coli TA143] gi|331078097|gb|EGI49303.1| diaminopimelate decarboxylase [Escherichia coli H299] Length = 420 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVLEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|293416082|ref|ZP_06658722.1| diaminopimelate decarboxylase [Escherichia coli B185] gi|291432271|gb|EFF05253.1| diaminopimelate decarboxylase [Escherichia coli B185] Length = 420 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL + Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVLEFGQDLQAISAGGGLSVPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|194433017|ref|ZP_03065300.1| diaminopimelate decarboxylase [Shigella dysenteriae 1012] gi|194418744|gb|EDX34830.1| diaminopimelate decarboxylase [Shigella dysenteriae 1012] gi|332088589|gb|EGI93702.1| diaminopimelate decarboxylase [Shigella dysenteriae 155-74] Length = 420 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + F+ +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FE----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELKIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|26249270|ref|NP_755310.1| diaminopimelate decarboxylase [Escherichia coli CFT073] gi|215488157|ref|YP_002330588.1| diaminopimelate decarboxylase [Escherichia coli O127:H6 str. E2348/69] gi|227888404|ref|ZP_04006209.1| diaminopimelate decarboxylase [Escherichia coli 83972] gi|300980450|ref|ZP_07175005.1| diaminopimelate decarboxylase [Escherichia coli MS 45-1] gi|301049368|ref|ZP_07196332.1| diaminopimelate decarboxylase [Escherichia coli MS 185-1] gi|312964885|ref|ZP_07779125.1| diaminopimelate decarboxylase [Escherichia coli 2362-75] gi|26109677|gb|AAN81880.1|AE016765_282 Diaminopimelate decarboxylase [Escherichia coli CFT073] gi|215266229|emb|CAS10656.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli O127:H6 str. E2348/69] gi|227834673|gb|EEJ45139.1| diaminopimelate decarboxylase [Escherichia coli 83972] gi|300298810|gb|EFJ55195.1| diaminopimelate decarboxylase [Escherichia coli MS 185-1] gi|300409257|gb|EFJ92795.1| diaminopimelate decarboxylase [Escherichia coli MS 45-1] gi|307554833|gb|ADN47608.1| diaminopimelate decarboxylase [Escherichia coli ABU 83972] gi|312290441|gb|EFR18321.1| diaminopimelate decarboxylase [Escherichia coli 2362-75] gi|315293830|gb|EFU53182.1| diaminopimelate decarboxylase [Escherichia coli MS 153-1] gi|320194974|gb|EFW69603.1| Diaminopimelate decarboxylase [Escherichia coli WV_060327] gi|324005608|gb|EGB74827.1| diaminopimelate decarboxylase [Escherichia coli MS 57-2] Length = 420 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVLEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAAEGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|291286718|ref|YP_003503534.1| Orn/DAP/Arg decarboxylase 2 [Denitrovibrio acetiphilus DSM 12809] gi|290883878|gb|ADD67578.1| Orn/DAP/Arg decarboxylase 2 [Denitrovibrio acetiphilus DSM 12809] Length = 412 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 90/403 (22%), Positives = 153/403 (37%), Gaps = 15/403 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 +E++ TPF+ Y AI +N F AF+ + +A+KA N A++K L + G Sbjct: 13 IEEIIKKFPTPFHIYDEKAIVENAKRFKKAFEWAPNFKNYFAVKALPNPAIVKLLKNEGF 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + + I+F+ +E A++ + Sbjct: 73 GADCSSMAELLICDMVGITGDDIMFTSNETPEEEYQKAMEQKAVINLDDITHIDFLE--- 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I ++ K+G+ Q+ Y + K Sbjct: 130 --KCAGLPETICFRYNPGPLKGGNDIIGKPEDAKYGLTKTQMIEAYKIMKSKGVKKFGMH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M ++++ A L + G N+ I++GGG+GI Y + + + Sbjct: 188 TMVASNELNVDYFVETAVILFEMAAEIATEVGINLDFINLGGGIGIPYKPEQDEVNLEEL 247 Query: 257 ASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 S I + Q +I E GR + G LVTK I K + + N Sbjct: 248 GSKIKAKYDEILSSKGFQPEIYFECGRMITGPYGYLVTKAIHTKSIYKEYIGVDASMANL 307 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 RP +Y +YH + + + D+VG +CE D A++RK+ D+L I Sbjct: 308 M-RPGMYGSYHHVTVLGKENAE-PVFTYDVVGSLCENCDKFAVDRKLPKIEIDDVLAIHD 365 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T+++L Sbjct: 366 TGAHGHSMGFNYNGKLRSAELLLKADGTAEMIRRAETYEDLFA 408 >gi|26988802|ref|NP_744227.1| diaminopimelate decarboxylase [Pseudomonas putida KT2440] gi|24983601|gb|AAN67691.1|AE016399_8 diaminopimelate decarboxylase [Pseudomonas putida KT2440] Length = 410 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 116/411 (28%), Positives = 177/411 (43%), Gaps = 25/411 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L + +P + Y T I N FD V +A KAN N V++ + G Sbjct: 8 LAEAVRQHGSPLWAYDTRTIADRVEQL-NVFD----TVRFAQKANPNLHVLRLMRAHGLV 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD VS GE+ RA AA + +GV T D +D + +E + + + Sbjct: 63 LDAVSLGEMERAFAAGASVDGD-PAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLHQL 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP +K +TG + K GI ++ A Sbjct: 122 GERSPGHRVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHG-----LHL 176 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + I + ++ R + + + G +I+ +GGGL Y S +P YA Sbjct: 177 VGVHMHIGSGVDYQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRSTDKPVDLQRYA 236 Query: 258 SLIH------QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + ++ +EPGRFLVA+ G LV +V ++K+ TFVI+D ND Sbjct: 237 QTWAVARKEIEAMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVIIDAGFNDL 296 Query: 312 MRPTLYDAYHEIN--YIVNPAGDRLHIHADIVGPICETGDFIALN------RKIALPRPG 363 MRP +Y AYH + A DR + GP+CE+GD + + + + G Sbjct: 297 MRPAMYGAYHGMTLLDADGQAVDRPRQPTVVAGPLCESGDVFTQDDQALTPQDLPQAQVG 356 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 DLL I GAYGA S YNSR L+PE ++ +IR R T Q+L+ L+ Sbjct: 357 DLLVIHDAGAYGASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLSLE 407 >gi|154494211|ref|ZP_02033531.1| hypothetical protein PARMER_03559 [Parabacteroides merdae ATCC 43184] gi|154086073|gb|EDN85118.1| hypothetical protein PARMER_03559 [Parabacteroides merdae ATCC 43184] Length = 386 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 136/365 (37%), Positives = 205/365 (56%), Gaps = 6/365 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPFY Y T +++ T V YA+KAN+N ++ +A G G D VS GE+ Sbjct: 17 TPFYFYDITLLKETLNTVKTEAGKYGYHVHYAVKANANPRILSIIAEYGLGADCVSGGEI 76 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + AL A PA +IV++GVGKT EI+L L + I+CFNVES +EL+ L + A + K A I Sbjct: 77 QAALDAGFPARKIVYAGVGKTDWEINLGLDNDIFCFNVESAAELEILEELAAAKNKVASI 136 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A R+NP+++A+TH KI+TG KE+KFGI + Q+ + L +K+ G+ HIGSQI Sbjct: 137 ALRINPEVDAHTHAKITTGMKENKFGINLSQLGQVLDLVCRLEHIKLIGIHCHIGSQITD 196 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP---SSSDYASLIHQY 263 + +F + ++ ++L + G +++++ GGGLGI Y+ + P + +A Sbjct: 197 MAAFRGLVIRVNEIQEELEARGIKVENLNFGGGLGIDYYHPNHLPIPAFDNYFAVFNKLL 256 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ EPGR +VA G L++KV+ +K K F ILD + +RP +YDAYH + Sbjct: 257 QLRPGQQVHFEPGRSIVAQCGSLISKVLYVKVGETKKFCILDAGFTELIRPAMYDAYHRM 316 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 N D D+VGPICE+ D + ++ GDL+ + GAYG V + YN Sbjct: 317 E---NITSDEEVEVYDVVGPICESSDVFGKDVELNRAHRGDLIALRSAGAYGEVMASQYN 373 Query: 384 SRLLI 388 R L Sbjct: 374 CRKLP 378 >gi|300923176|ref|ZP_07139232.1| diaminopimelate decarboxylase [Escherichia coli MS 182-1] gi|301326168|ref|ZP_07219554.1| diaminopimelate decarboxylase [Escherichia coli MS 78-1] gi|300420536|gb|EFK03847.1| diaminopimelate decarboxylase [Escherichia coli MS 182-1] gi|300847133|gb|EFK74893.1| diaminopimelate decarboxylase [Escherichia coli MS 78-1] Length = 420 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDKATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGLVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL + Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|331674321|ref|ZP_08375081.1| diaminopimelate decarboxylase [Escherichia coli TA280] gi|331068415|gb|EGI39810.1| diaminopimelate decarboxylase [Escherichia coli TA280] Length = 420 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQ-SHPDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVLEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|121611670|ref|YP_999477.1| diaminopimelate decarboxylase [Verminephrobacter eiseniae EF01-2] gi|121556310|gb|ABM60459.1| diaminopimelate decarboxylase [Verminephrobacter eiseniae EF01-2] Length = 414 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 117/408 (28%), Positives = 180/408 (44%), Gaps = 21/408 (5%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA TP + Y I + S FD + +A KA SN ++ + G +D Sbjct: 13 LADRFATPLWVYDAATIVERIARLSR-FD----TIRFAQKACSNIHILALMRAQGVLVDA 67 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RALAA + + T D D A + + V + + + Sbjct: 68 VSRGEILRALAAGYQT-GAQPAQIVFTADLFDAATLACVIEHRVPVNAGSMDMLHQLGPR 126 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + R+NP K +TG + K GI + + A A G+ + G+ MHI Sbjct: 127 SPGHAVWLRINPGFGHGHSHKTNTGGEHSKHGIWHTDLPAALA-AIRQHGLDLVGLHMHI 185 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY---- 256 GS + + + L + +R+ GH+++ I GGGL + Y S ++ Y Sbjct: 186 GSGV-DYRHLAQVCDAMVALVRGVRAAGHDLRAISAGGGLSVPYRSGDPVVDTAHYHGLW 244 Query: 257 --ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 A Q + +EPGR+LVA+ G+L+ V + K+ FV+LD N+ +RP Sbjct: 245 EAARQQAQAIIGHPLTLEIEPGRYLVAESGVLLAAVCATKQVGSNHFVLLDAGFNELLRP 304 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-------NRKIALPRPGDLLY 367 ++Y +YH ++ + + GP+CE GD R + GDLL Sbjct: 305 SMYGSYHAMSLLRRDGASAAGRPTVVAGPLCEAGDVFTQSGDGLVLPRDLPPAEVGDLLL 364 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 I TGAYGA S YN+R L E +V G+Q +IR R T EL+ L+ Sbjct: 365 IHDTGAYGATMSSNYNTRPLSAEALVEGAQARLIRRRQTVDELLALER 412 >gi|24114117|ref|NP_708627.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 301] gi|30064179|ref|NP_838350.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 2457T] gi|110806774|ref|YP_690294.1| diaminopimelate decarboxylase [Shigella flexneri 5 str. 8401] gi|24053253|gb|AAN44334.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 301] gi|30042436|gb|AAP18160.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 2457T] gi|110616322|gb|ABF04989.1| diaminopimelate decarboxylase [Shigella flexneri 5 str. 8401] gi|281602194|gb|ADA75178.1| Diaminopimelate decarboxylase [Shigella flexneri 2002017] gi|313647902|gb|EFS12348.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 2457T] gi|332753559|gb|EGJ83939.1| diaminopimelate decarboxylase [Shigella flexneri 4343-70] gi|332753695|gb|EGJ84074.1| diaminopimelate decarboxylase [Shigella flexneri K-671] gi|332754246|gb|EGJ84612.1| diaminopimelate decarboxylase [Shigella flexneri 2747-71] gi|332765793|gb|EGJ96006.1| diaminopimelate decarboxylase [Shigella flexneri 2930-71] gi|333000048|gb|EGK19631.1| diaminopimelate decarboxylase [Shigella flexneri K-218] gi|333015035|gb|EGK34378.1| diaminopimelate decarboxylase [Shigella flexneri K-304] Length = 420 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 171/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + F+ +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FE----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDTLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|221124278|ref|XP_002160229.1| PREDICTED: similar to Ornithine decarboxylase [Hydra magnipapillata] Length = 361 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 154/361 (42%), Positives = 221/361 (61%), Gaps = 4/361 (1%) Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KANS+ A+++ A G G DIVSEGEL R LAA A +++FSGVGKT E+ AL+ G Sbjct: 1 MKANSSLAILQLFAKAGCGFDIVSEGELARVLAAGADAGKVIFSGVGKTRAEMARALEVG 60 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I CFNVESE+E+ LN+ A+ +GK+API+ RVNP+++ TH ISTG K +KFGI + Sbjct: 61 IGCFNVESEAEIDVLNEVALGMGKQAPISIRVNPNVDPKTHPYISTGLKGNKFGIAHERT 120 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 Y A+ LPG+K+ G+D HIGSQI + + A + DL + + + G I HID GG Sbjct: 121 LLTYQRAAALPGLKVVGIDCHIGSQITEETPYLDAMDRMLDLVESIEAAGIGIHHIDFGG 180 Query: 239 GLGIAYHSDHRPPSSSDYASLIH--QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 GLGI Y+ D P + + + L+ G Q ++++EPGR LV + G+ VT+V+ +K Sbjct: 181 GLGINYNGDTPPAADALWHKLLAKLDARGFGQRQLMIEPGRSLVGNAGVCVTEVLYMKPG 240 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL-HIHADIVGPICETGDFIALNR 355 K F I+D AMND RP +Y A+H I + A D+VGP+CE+GD+I +R Sbjct: 241 EQKNFCIVDAAMNDLPRPAMYQAFHTIVPVKQAASQSSGAEVFDVVGPVCESGDWIGHDR 300 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GD L + GAY S YNSR E++V+G+ H+IR R +F + I + Sbjct: 301 TLQ-VQSGDKLAVLSAGAYCMSMSSNYNSRPKAAEVLVDGAHSHLIRQRDSFADQIRGEK 359 Query: 416 I 416 + Sbjct: 360 L 360 >gi|302392019|ref|YP_003827839.1| Orn/DAP/Arg decarboxylase 2 [Acetohalobium arabaticum DSM 5501] gi|302204096|gb|ADL12774.1| Orn/DAP/Arg decarboxylase 2 [Acetohalobium arabaticum DSM 5501] Length = 412 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 150/404 (37%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N + AF D +A+KA N ++K L G Sbjct: 11 LKEITEEYPTPFHLYDEQGIRENARKLNEAFAWNDGFKEYFAVKATPNPTILKILQEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS ++ +LA + + Sbjct: 71 GVDCSSLTELMMSDKVGFSGDDIMFSSNVTPKEDYELASKLDAIINLDDITHIDFLEE-- 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G I+ R NP N + I E K+G Q+ + + Sbjct: 129 --VAGIPERISCRYNPGNNFKSDNDIMDNPAEAKYGFTYPQLVEGFKKLQDKGAKEFGLH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + A L + + G I I++ GG+GI Y + P Sbjct: 187 AFLASNTTADEYYPALARILFETAVKLNKETGAEIGFINLSGGIGIPYRPEEEPADIMAI 246 Query: 257 ASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++ G LVT I K K +V LD Sbjct: 247 GEGVREAYEEILVPAGLDDVAIFTELGRFMLGPYGCLVTTAIHKKHI-YKDYVGLDACAA 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 D MRP +Y AYH I+ + H D+ G +CE D A++R + GDLL I Sbjct: 306 DLMRPAMYGAYHHISVMGKEDQPHDH-KYDVTGGLCENNDKFAIDRMLPKVDKGDLLVIH 364 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T + Sbjct: 365 DTGAHGYAMGYNYNGKLRSAEVLLQEDGSTKLIRRAETPDDYFA 408 >gi|191173213|ref|ZP_03034744.1| diaminopimelate decarboxylase [Escherichia coli F11] gi|300995825|ref|ZP_07181257.1| diaminopimelate decarboxylase [Escherichia coli MS 200-1] gi|190906464|gb|EDV66072.1| diaminopimelate decarboxylase [Escherichia coli F11] gi|300304680|gb|EFJ59200.1| diaminopimelate decarboxylase [Escherichia coli MS 200-1] gi|324011693|gb|EGB80912.1| diaminopimelate decarboxylase [Escherichia coli MS 60-1] Length = 420 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSLGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVLEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|302530980|ref|ZP_07283322.1| diaminopimelate decarboxylase [Streptomyces sp. AA4] gi|302439875|gb|EFL11691.1| diaminopimelate decarboxylase [Streptomyces sp. AA4] Length = 444 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 20/420 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 G L + LA TP Y + + + A D V +A KA +A Sbjct: 31 EGGELLFAGAPVSHLAARFGTPAYLLDEEQVRETARAYRRALPEAD--VAFASKALCTRA 88 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ +A G LD S GE+ A A PAERI+ G KT +++ ALQ G+ ++S Sbjct: 89 VLRWVAEEGLSLDTCSAGEIAVARAVGFPAERILLHGNAKTPEDLKAALQYGVGRIVLDS 148 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY---- 182 E++ L A + RV P ++ +TH I+TG + KFG + Sbjct: 149 LDEVEQLGALAHGAQ---RVLIRVTPGVSGDTHAAITTGTEGQKFGFSLRADVRDNVDRA 205 Query: 183 -AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGL 240 A + P ++++G+ HIGSQ+ +++ + +A + + ++ ++R ++ +D+GGG Sbjct: 206 VAAVLSQPSLQLTGLHCHIGSQVSRVDRYEEAARRMVEVLVRIRDQYGITLRELDLGGGH 265 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL-------EPGRFLVADVGILVTKVISI 293 + Y YA + G EPGR +V GI V +V ++ Sbjct: 266 AVPYADREASFDLDGYARRLRVALGYECSSRDFPLPRLTIEPGRAIVGPAGITVYRVCAV 325 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K +TFV +D M+D RP LY A + +V +VG CE+GD +A Sbjct: 326 K-RGARTFVAVDGGMSDNPRPALYGARY-TARLVGRRTKAARTPMTVVGRHCESGDVLAD 383 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 GDLL + TGAY + YN P + V ++ R T ++L+ Sbjct: 384 VCLPDDIHVGDLLAVPCTGAYHHSLASNYNLVGRPPLVGVRDGHATLLVRRETEEDLLRR 443 >gi|73669151|ref|YP_305166.1| diaminopimelate decarboxylase [Methanosarcina barkeri str. Fusaro] gi|72396313|gb|AAZ70586.1| diaminopimelate decarboxylase [Methanosarcina barkeri str. Fusaro] Length = 420 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 89/404 (22%), Positives = 147/404 (36%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 ++++ TPF+ Y AI +N F + +A+KA N ++K L G Sbjct: 13 IQEIIKKYPTPFHIYDEKAILENAEKMKAVFREVPGFKEFFAVKALPNPFILKILREKGF 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A A + E I+FS +E A + G Y + Sbjct: 73 GADCSSLPELILAEKAGITGEDIMFSSNDTPAEEFLKAKELGAYINLDDISHIDYLE--- 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I I +E K+G Q+ Y + Sbjct: 130 --KYAGLPDIVCFRYNPGPLKEGNAIIGRPEEAKYGFTRDQLFEGYRILRDRGVKRFGMH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M +++ A L + + + + +++GGG+GI Y + P S Sbjct: 188 TMVASNELKADYFVETARILFELIVEISKELNIKFEFVNLGGGIGIPYRPEEEPVSFEAV 247 Query: 257 ASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 A + + + K+ LE GR + G L+T+V +K + + N Sbjct: 248 AKGVKEAYEATITASGLYPLKVFLECGRVITGPYGYLITQVRHLKHTYKDYVGMDSCMAN 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I + + D+ G +CE D A++R + GD+L I Sbjct: 308 LM-RPGIYGAYHHITVLGK-ENEAPVHKYDVTGSLCENNDKFAIDRHLPEIEIGDILAIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ IR T ++ Sbjct: 366 DTGAHGHSMGFNYNGKLRSAELLLRKDGSVVQIRRAETIEDYFA 409 >gi|332295006|ref|YP_004436929.1| diaminopimelate decarboxylase [Thermodesulfobium narugense DSM 14796] gi|332178109|gb|AEE13798.1| diaminopimelate decarboxylase [Thermodesulfobium narugense DSM 14796] Length = 427 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 115/423 (27%), Positives = 188/423 (44%), Gaps = 16/423 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALK 60 F+ E + +S++ L TP Y ++ +F +F ++ + +A K Sbjct: 8 FERREKLCYIGGISIKVLVEKYSTPLYIMCAQTVKSRVESFKESFKKYLPFESRIAFAGK 67 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + +K L L LD+VS GEL A+ A +RI F G K+ +E++ A++S + Sbjct: 68 SLCVTGFLKKLKELDMWLDVVSGGELYTAIKAGFDTKRIYFHGNNKSFEELEFAIRSNVG 127 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 V+ SE++ + + + P RV+P I A+TH+ I TGK + KFG PI + Sbjct: 128 YIVVDGFSEIEKIRELSKKYSYI-PCMIRVSPGIEAHTHEFIKTGKIDSKFGFPIGEDAI 186 Query: 181 L-YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 S + V G+ HIGSQI + + ++ D +L G ++++I+ GGG Sbjct: 187 KAVKELSLIDSVSFKGIHAHIGSQIFDSNPYIELVNVMFDFANKLSDEGFSLENINFGGG 246 Query: 240 LGIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y + P S ++ + + + +EPGR + GI V +V S Sbjct: 247 FGIVYTKEDHPLSIEEFIKDISFEINKNMKKYNMKDISFTVEPGRSIAGPSGITVYRVGS 306 Query: 293 IKKSADK-TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IKK +V +D M D R LY A + IVG CE+GD + Sbjct: 307 IKKIEGFLPYVAVDGGMADNPRYALYRAKYHAELDEKT---EAFQEVKIVGRFCESGDML 363 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + GDLL + TGAY + YN +MV + ++ R T+ +++ Sbjct: 364 IERIMLPEISTGDLLIVFATGAYNYSMASNYNRFGRPAMVMVEDGKDTLLVRRETYDDIV 423 Query: 412 ELD 414 LD Sbjct: 424 SLD 426 >gi|303243073|ref|ZP_07329522.1| Orn/DAP/Arg decarboxylase 2 [Acetivibrio cellulolyticus CD2] gi|302589387|gb|EFL59186.1| Orn/DAP/Arg decarboxylase 2 [Acetivibrio cellulolyticus CD2] Length = 422 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 93/404 (23%), Positives = 148/404 (36%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N AF +A+KA N +++K L G Sbjct: 11 LKEIVKEYPTPFHLYDEKGIRENARKLKEAFSWNKGFKEYFAVKATPNPSILKVLKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A + I+FS ++ LA + + Sbjct: 71 GADCSSFTELLMSKAVGFSGDEIMFSSNATPKEDFMLARELNSTINLDDFTHIDFLEK-- 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G I+ R NP + +I K+ K+G Q+ Y + Sbjct: 129 --VAGIPETISCRFNPGGDFVIDNQIMDTPKDAKYGFTREQMTEGYKKLISKGVKHFGMH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + + G +I I++ GG+GI Y + +P Sbjct: 187 AFLASNTVANEYYPVLARTLFKTAVELKEETGAHIAFINLSGGVGIPYRPEQQPVDIHSI 246 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 I + F I E GRF++ G LV+ I K + + A N Sbjct: 247 GEEIRKAFEEILVPAGMGDVAIYTELGRFMLGPYGCLVSTAIHEKHIHKEYIGLDACAAN 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I + H DI G +CE D A++R + GDL+ + Sbjct: 307 LM-RPAMYGAYHHITVMGKENRPCDH-KYDITGGLCENNDKFAIDRMLPKIDIGDLIVLH 364 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T + Sbjct: 365 DTGAHGFAMGYNYNGKLRSAELLLREDGGVELIRRAETPADYFA 408 >gi|290476309|ref|YP_003469213.1| diaminopimelate decarboxylase, PLP-binding [Xenorhabdus bovienii SS-2004] gi|289175646|emb|CBJ82449.1| diaminopimelate decarboxylase, PLP-binding [Xenorhabdus bovienii SS-2004] Length = 427 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 117/421 (27%), Positives = 184/421 (43%), Gaps = 32/421 (7%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L +L TP + Y + I + FD ++ +A KA SN ++ + G Sbjct: 18 NLLRLPVDYGTPLWVYDSDIIIRKINRLKR-FD----IIRFAQKACSNTHILSLMRAQGV 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A R V ++ + + ++ + ++ Sbjct: 73 KVDAVSLGEIERALYAGYQPGRDRSEIVFTADLIDEIT-LNRVIELDIPVNVGSIDMLEQ 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + PI R+NP +K +TG + K GI + K+ G+ Sbjct: 132 IGTRQSGHPIWLRINPGFGHGHSQKTNTGGENSKHGIWFQDLPLAIEKVRQYGL-KLVGL 190 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + + + +Q+ S G +IQ I GGGL I Y + + Y Sbjct: 191 HMHIGSGV----DYQHLANVCNAMVEQVISCGEDIQAISAGGGLSIPYKTGDEIVDTEHY 246 Query: 257 ASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 SL H+ ++ +EPGRFLVA+ GIL+ +V ++K + +V++D ND Sbjct: 247 YSLWHKARQRIERHLGHHVELEIEPGRFLVAESGILMAEVRAVKPMGSRHYVLVDAGFND 306 Query: 311 FMRPTLYDAYHE--------INYIVNPAGDRLHIHADIVGPICETGDFIAL-------NR 355 MRPT+Y +YH + + D + GP+CE+GD R Sbjct: 307 LMRPTMYGSYHHISVLSVNSQHIDEAVSQDAELHETLVAGPLCESGDVFTQSAGGDVVPR 366 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GD L TGAYGA S YNSR LIPEI+ +IR R T +EL+ L++ Sbjct: 367 LLPRVCVGDYLIFHDTGAYGASMSSNYNSRPLIPEILFIEGDARLIRRRQTIEELLALEA 426 Query: 416 I 416 + Sbjct: 427 V 427 >gi|271501924|ref|YP_003334950.1| diaminopimelate decarboxylase [Dickeya dadantii Ech586] gi|270345479|gb|ACZ78244.1| diaminopimelate decarboxylase [Dickeya dadantii Ech586] Length = 420 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 115/416 (27%), Positives = 178/416 (42%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL L P + Y I + FD + +A KA SN ++ + G Sbjct: 16 SLRALPAQFGCPLWAYDAATIVERIGQLRQ-FD----TIRFAQKACSNLHILALMRQQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RALAA + T D +D A ++ + + + + Sbjct: 71 KVDSVSLGEIERALAAGFEPGTD-AHEIVFTADVLDDATLQRVHELAIPVNAGSIDMLHQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ R+NP +K +TG + K GI + A + +K+ G+ Sbjct: 130 LGERSPGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQALE-ALSRYHLKLVGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + ++ + QQ+ + G +++ I GGGL I YH + Y Sbjct: 189 HMHIGSGV----DYRHLEQVCEAMVQQVLAVGQDLEAISAGGGLSIPYHHGGERIDTQHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L +Q + +EPGRFLVA+ G+LV +V ++K + FV++D +D Sbjct: 245 YGLWNQARERIAAHLGHPVALEIEPGRFLVAESGVLVAQVRAVKDMGSRHFVLVDAGFSD 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALNR-------KIALP 360 MRP +Y +YH I + GP+CE+GD + Sbjct: 305 LMRPAMYGSYHHITLLPGDGRDLSQSPRRDTVVAGPLCESGDVFTQQAGGGVETMALPSA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L TGAYGA S YNSR LI E++ Q +IR R T EL+ L+ + Sbjct: 365 QVGDYLVFHDTGAYGASMSSNYNSRPLIAEVLFEQGQPRLIRRRQTLDELLALERV 420 >gi|170023273|ref|YP_001719778.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis YPIII] gi|169749807|gb|ACA67325.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis YPIII] Length = 420 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 110/416 (26%), Positives = 172/416 (41%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + FD ++ +A KA SN +++ + G Sbjct: 16 NLIALPERFGCPVWAYDGDIIAERINQLR-HFD----VIRFAQKACSNIHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + + T D +D A + N+ + + + Sbjct: 71 KVDSVSLGEIERALHAGYQP-GQEPAEIVFTADLLDQATLLRVTELNIPVNAGSIDMLDQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI ++ Sbjct: 130 LGQQAPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEELPRALKKIEHYG-----LT 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I I + ++ + QQ+ + GH+I I GGGL I Y + Y Sbjct: 185 LVGIHMHIGSGVDYQHLEQVCDAMVQQVITLGHDISAISAGGGLSIPYQFGDDIIDTEHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + +EPGRFLVA+ G+L+ +V ++K + +V++D ND Sbjct: 245 YGLWNSARERIAAHLGHPVSLEIEPGRFLVAESGVLIAQVRAVKDMGRRHYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALNR-------KIALP 360 MRP +Y +YH I I + GP+CE+GD + Sbjct: 305 LMRPAMYGSYHHISLLPADGRDLASAPLIDTVVAGPLCESGDVFTQQEGGGVETLALPAA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L TGAYGA S YNSR L+PE++ Q +IR R T +ELI+L+ + Sbjct: 365 VIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEKGQPRLIRRRQTIEELIDLERV 420 >gi|261346253|ref|ZP_05973897.1| diaminopimelate decarboxylase [Providencia rustigianii DSM 4541] gi|282565561|gb|EFB71096.1| diaminopimelate decarboxylase [Providencia rustigianii DSM 4541] Length = 419 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 118/413 (28%), Positives = 185/413 (44%), Gaps = 27/413 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L L TP + Y + I + FD V +A KA+SN +++ + G Sbjct: 17 LRALPAQFGTPVWVYDSEVIVERIKQLQ-LFD----TVRFAQKASSNIHILRLMRTQGVK 71 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ RAL A R S + T D +D A + ++ + + ++ Sbjct: 72 VDSVSLGEIERALVAGFQPGRA-KSEIVFTADVLDPATLHKVTELDIPVNAGSIDMLKQI 130 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 P+ R+NP +K +TG + K GI H + A +K+ G+ Sbjct: 131 GEYKAGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWHHDLPEALAIIRQY-NLKLVGIH 189 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 MHIGS + + + + + + S G +I I GGGL Y + Y Sbjct: 190 MHIGSGV----DYQHLANVCDAMVELVISAGVDIDAISAGGGLSTPYREQDELIDVAHYY 245 Query: 258 SLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 SL + + ++ +EPGR+LVA+ G+L+ +V ++K + +V++D ND Sbjct: 246 SLWNSARQRIEQHLGHKIELEIEPGRYLVAESGVLLAQVRAVKNMGSRHYVLVDSGFNDL 305 Query: 312 MRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIA-------LNRKIALPR 361 MRP +Y +YH I N ++ I GP+CE+GD R + + Sbjct: 306 MRPAMYGSYHHISVLPANGNSVENQPLKETIIAGPLCESGDVFTQLEGGMVETRLLPDVK 365 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GD L TGAYGA S YNSR L+PE+M + +IR R T QEL+ L+ Sbjct: 366 VGDFLVFHDTGAYGASMSSNYNSRPLLPEVMFVDGKPTLIRRRQTIQELLALE 418 >gi|238754529|ref|ZP_04615883.1| Diaminopimelate decarboxylase [Yersinia ruckeri ATCC 29473] gi|238707160|gb|EEP99523.1| Diaminopimelate decarboxylase [Yersinia ruckeri ATCC 29473] Length = 420 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 115/416 (27%), Positives = 182/416 (43%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + FD ++ +A KA SN +++ + G Sbjct: 16 NLRALPARFGCPVWAYDGDIIAERINQLR-HFD----VIRFAQKACSNIHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + + + T D +D A + + + + + Sbjct: 71 KVDSVSLGEIERALLAGYQPGKE-PAEIVFTADVLDQATLERVVELGIPVNAGSIDMLTQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI H + A+ K S Sbjct: 130 LGEQAPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHHDLA-----AAITEIGKYSLK 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I I + ++ + +Q+ + G +I I GGGL I Y +D + Y Sbjct: 185 LVGIHMHIGSGVDYQHLEQVCDAMVRQVITLGQDISAISAGGGLSIPYQNDEDIIDTEHY 244 Query: 257 ASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L ++ + + +EPGRFLVA+ G+LV +V ++K + +V++D ND Sbjct: 245 YGLWNKARQQIAMHLGHPVSLEIEPGRFLVAESGVLVAQVRAVKNMGSRHYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIH---ADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH I+ + D H + I GP+CE+GD R + P Sbjct: 305 LMRPAMYGSYHHISVLPADGRDLSHEPLIDSVIAGPLCESGDIFTQQAGGGLETRTLPRP 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L TGAYGA S YNSR L+PE++ +IR R T +EL+ L+ Sbjct: 365 VIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGHPRLIRRRQTIEELVALEMF 420 >gi|242238205|ref|YP_002986386.1| diaminopimelate decarboxylase [Dickeya dadantii Ech703] gi|242130262|gb|ACS84564.1| diaminopimelate decarboxylase [Dickeya dadantii Ech703] Length = 420 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 118/416 (28%), Positives = 180/416 (43%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL L P + Y I FD + +A KA SN +++ + G Sbjct: 16 SLRALPAEFGCPVWAYDAQTIIDRIEQLRQ-FD----TIRFAQKACSNIHILRLMRQQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RALAA + T D +D A ++ ++ + + + Sbjct: 71 KVDSVSLGEIERALAAGFVP-GSADHEIVFTADVLDRATLQRVHELHIPVNAGSVDMLSQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + RVNP +K +TG + K GI + A +K+ G+ Sbjct: 130 LGAASPGHAVWLRVNPGFGHGHSQKTNTGGENSKHGIWYADLPLALAEIQRY-QLKLVGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + ++ + Q+ + G ++ I GGGL I YH D + Y Sbjct: 189 HMHIGSGV----DYGHLEQVCDAMVNQVIAFGQDLTAISAGGGLSIPYHHDGERIDTRHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L HQ + +EPGRFLVA+ G+LV +V ++K + FV++D ND Sbjct: 245 YGLWHQARERIAAHLGHAVTLEIEPGRFLVAEAGVLVAEVRAVKDMGSRHFVLVDAGFND 304 Query: 311 FMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALNR-------KIALP 360 MRP +Y +YH I + D + GP+CE+GD + Sbjct: 305 LMRPAMYGSYHHITLLAGDGRDLTTAARRDTVVAGPLCESGDVFTQQAGGGVETLALPDA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 R GD L TGAYGA S YNSR L+PE++ + +IR R T EL+ L+ + Sbjct: 365 RVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGKPRLIRRRQTLDELLALERL 420 >gi|223043171|ref|ZP_03613218.1| diaminopimelate decarboxylase [Staphylococcus capitis SK14] gi|222443382|gb|EEE49480.1| diaminopimelate decarboxylase [Staphylococcus capitis SK14] Length = 421 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 118/425 (27%), Positives = 189/425 (44%), Gaps = 22/425 (5%) Query: 5 KYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKA 61 KY E G L SL+ +A TP Y I + +AF+ + YA KA Sbjct: 4 KYNEYGELTMGGTSLKTVAQSFGTPTIVYDEDQIRNQMRRYHSAFEKSGLKYNISYASKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + ++K + LD+VSEGEL AL A A RI F G KT EI AL++ I Sbjct: 64 FTCIQMVKLVQEEDLQLDVVSEGELYTALEAGFDANRIHFHGNNKTKREIQYALENNIGY 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IH 179 F +++ E+ +++ A + I RVNP + A+TH+ I TG+++ KFG+ I Sbjct: 124 FVIDALEEIDLIDKYA---SDEVNIVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLAL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +++ GV H+GSQI+ E+ + KL+ + ++ +++GGG Sbjct: 181 EAINKVKASKHLQLKGVHFHVGSQIEGTEAMIETAKLVLHWLSENE---IKVELLNLGGG 237 Query: 240 LGIAYHSDHRPPSS-------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y +D +I +EPGR +V + GI + +V + Sbjct: 238 FGIKYVEGDESFPIEEGIAEITDAIKETAHSLNYEVPEIGIEPGRSIVGEAGITLYEVGT 297 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK+ + +D M+D +R LYDA ++ + + I G +CE+GD I Sbjct: 298 IKEIPEVNKYVSVDGGMSDHIRTALYDAKYQALLVNR--NEEADDTVTIAGKLCESGDII 355 Query: 352 ALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 K+ + GD L I TGAY + YN + + + R + ++L Sbjct: 356 IKKAKLPSSIKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQL 415 Query: 411 IELDS 415 I D+ Sbjct: 416 IINDT 420 >gi|314933578|ref|ZP_07840943.1| diaminopimelate decarboxylase [Staphylococcus caprae C87] gi|313653728|gb|EFS17485.1| diaminopimelate decarboxylase [Staphylococcus caprae C87] Length = 421 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 118/425 (27%), Positives = 188/425 (44%), Gaps = 22/425 (5%) Query: 5 KYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKA 61 KY E G L SL+ +A TP Y I + +AF+ + YA KA Sbjct: 4 KYNEYGELTMGGTSLKTVAQSFGTPTIVYDEDQIRNQMRRYHSAFEKSGLKYNISYASKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + ++K + LD+VSEGEL AL A A RI F G KT EI AL++ I Sbjct: 64 FTCIQMVKLVQEEDLQLDVVSEGELYTALEAGFDANRIHFHGNNKTKREIQYALENNIGY 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IH 179 F +++ E+ +++ A + I RVNP + A+TH+ I TG+++ KFG+ I Sbjct: 124 FVIDALEEIDLIDKYA---SDEVNIVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLAL 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 +++ GV H+GSQI+ E+ + KL+ + ++ +++GGG Sbjct: 181 EAINKVKASKHLQLKGVHFHVGSQIEGTEAMIETAKLVLHWLSENE---IKVELLNLGGG 237 Query: 240 LGIAYHSDHRPPSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 GI Y D +I +EPGR +V + GI + +V + Sbjct: 238 FGIKYVEGDESFPIEEGIAEIADAIKETAHSLNYEVPEIGIEPGRSIVGEAGITLYEVGT 297 Query: 293 IKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK+ + +D M+D +R LYDA ++ + + I G +CE+GD I Sbjct: 298 IKEIPEVNKYVSVDGGMSDHIRTALYDAKYQALLVNR--NEEADDTVTIAGKLCESGDII 355 Query: 352 ALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 K+ + GD L I TGAY + YN + + + R + ++L Sbjct: 356 IKKAKLPSSIKRGDYLAILSTGAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQL 415 Query: 411 IELDS 415 I D+ Sbjct: 416 IINDT 420 >gi|51597359|ref|YP_071550.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP 32953] gi|186896467|ref|YP_001873579.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis PB1/+] gi|51590641|emb|CAH22283.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP 32953] gi|186699493|gb|ACC90122.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis PB1/+] Length = 420 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 110/416 (26%), Positives = 172/416 (41%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + FD ++ +A KA SN +++ + G Sbjct: 16 NLIALPERFGCPVWAYDGDIIAERINQLR-HFD----VIRFAQKACSNIHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + + T D +D A + N+ + + + Sbjct: 71 KVDSVSLGEIERALHAGYQP-GQEPAEIVFTADLLDQATLLRVTELNIPVNAGSIDMLDQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI ++ Sbjct: 130 LGQQAPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEELPRALKKIEHYG-----LT 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I I + ++ + QQ+ + GH+I I GGGL I Y + Y Sbjct: 185 LVGIHMHIGSGVDYQHLEQVCDAMVQQVITLGHDISAISAGGGLSIPYQFGDDVIDTEHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + +EPGRFLVA+ G+L+ +V ++K + +V++D ND Sbjct: 245 YGLWNSARERIAAHLGHPVSLEIEPGRFLVAESGVLIAQVRAVKDMGRRHYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALNR-------KIALP 360 MRP +Y +YH I I + GP+CE+GD + Sbjct: 305 LMRPAMYGSYHHISLLPADGRDLASAPLIDTVVAGPLCESGDVFTQQEGGGVETLALPAA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L TGAYGA S YNSR L+PE++ Q +IR R T +ELI+L+ + Sbjct: 365 VIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEKGQPRLIRRRQTIEELIDLERV 420 >gi|312199786|ref|YP_004019847.1| diaminopimelate decarboxylase [Frankia sp. EuI1c] gi|311231122|gb|ADP83977.1| diaminopimelate decarboxylase [Frankia sp. EuI1c] Length = 444 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 117/418 (27%), Positives = 189/418 (45%), Gaps = 17/418 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G LH ++ ++A TP Y + + A G VCYA KA +AV Sbjct: 32 DGELHVGGSAMTRVAARFGTPAYVLDEATFRRRARQYRAALPG--VEVCYAGKALLTRAV 89 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD+ S GEL A + PA+R++ G KT +++ AL + ++S Sbjct: 90 ARWVAQEGLSLDVCSAGELAVARSVHFPADRLILHGNAKTPEDLKAALDYHVGRIVIDST 149 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ L L + RV PD++ +TH ISTG + KFGIP+ Sbjct: 150 DEISHLG----PLAHDQRVLLRVTPDVDGHTHHAISTGVPDQKFGIPLGAATDAAGQVLD 205 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHS 246 PG+++ G+ HIGSQ+ +I + +A + L L +R + +++GGG + Y Sbjct: 206 QPGLRLVGLHCHIGSQLTRIGAIEEATRRLIGLLATIRDQHGIVLAQLNIGGGHAVRYTP 265 Query: 247 DHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + A + ++ +EPGR L+A GI + +VI++K Sbjct: 266 GDDGFDLAGLAHRLTGALAYESERHRLPAPRLTVEPGRALIAQAGITLYRVITVKHLPGV 325 Query: 300 TFVI-LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + +D M+D RP LY A + + I + H A +VG CE GD +A + + Sbjct: 326 RTFVAVDGGMSDNPRPALYGARYTLQLIGRRSLAASH-PATVVGRHCEAGDILARDVPLP 384 Query: 359 -LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GDLL + TGAY + TYN P + V+ ++ R T ++L+ D Sbjct: 385 GDIHAGDLLAVATTGAYHHSLASTYNLVGRPPLVAVHDGTARLLIRRETEEDLLTRDI 442 >gi|291534314|emb|CBL07426.1| Diaminopimelate decarboxylase [Roseburia intestinalis M50/1] gi|291538057|emb|CBL11168.1| Diaminopimelate decarboxylase [Roseburia intestinalis XB6B4] Length = 427 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 95/404 (23%), Positives = 147/404 (36%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y I +N AF +A+KA N ++ L Sbjct: 12 LEEIVKKYPTPFHLYDEKGIRENAKAVKEAFSWNPGFREYFAVKATPNPYILDILKEYDC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A + + I+FS +E A + G + Sbjct: 72 GCDCASLTELMLADSQGFDGKHIMFSSNDTPAEEFKFANELGAIINLDDFTHIDFLEK-- 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G QI + Sbjct: 130 -TIGKIPETISCRYNPGGVFKMSNGIMDNPGDAKYGFTHEQIIEGFKILKEKGAKHFGVH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G +IQ I++ GG+G+ Y D P Sbjct: 189 AFLASNTVTNEYYPKLARQLFELVVELRDKTGCDIQFINLSGGVGVPYTPDQTPNDIRVI 248 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + F + I E GRF++A G LVTK I K + K ++ +D Sbjct: 249 GQGVKEAFEEILVPAGLGNISIYTEMGRFMLAPYGCLVTKAIHEKHT-YKEYIGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H D+ G +CE D A++R + GDLL I Sbjct: 308 NLMRPAIYGAYHHITVMGKEDEPCDH-KYDVTGSLCENCDKFAIDRMLPKIDMGDLLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+G YN +L E+++ +IR T + Sbjct: 367 DAGAHGFSMGYNYNGKLRSAEVLLKEDGSTQLIRRAETPDDYFR 410 >gi|22127060|ref|NP_670483.1| diaminopimelate decarboxylase [Yersinia pestis KIM 10] gi|45442627|ref|NP_994166.1| diaminopimelate decarboxylase [Yersinia pestis biovar Microtus str. 91001] gi|108806470|ref|YP_650386.1| diaminopimelate decarboxylase [Yersinia pestis Antiqua] gi|108813160|ref|YP_648927.1| diaminopimelate decarboxylase [Yersinia pestis Nepal516] gi|145598995|ref|YP_001163071.1| diaminopimelate decarboxylase [Yersinia pestis Pestoides F] gi|150260186|ref|ZP_01916914.1| diaminopimelate decarboxylase [Yersinia pestis CA88-4125] gi|153949493|ref|YP_001399956.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP 31758] gi|162418960|ref|YP_001607600.1| diaminopimelate decarboxylase [Yersinia pestis Angola] gi|165925080|ref|ZP_02220912.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165937375|ref|ZP_02225939.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis str. IP275] gi|166010227|ref|ZP_02231125.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166212689|ref|ZP_02238724.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str. B42003004] gi|167400100|ref|ZP_02305618.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419377|ref|ZP_02311130.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425309|ref|ZP_02317062.1| diaminopimelate decarboxylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466654|ref|ZP_02331358.1| diaminopimelate decarboxylase [Yersinia pestis FV-1] gi|218927976|ref|YP_002345851.1| diaminopimelate decarboxylase [Yersinia pestis CO92] gi|229837708|ref|ZP_04457868.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis Pestoides A] gi|229840698|ref|ZP_04460857.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842746|ref|ZP_04462900.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis biovar Orientalis str. India 195] gi|229903606|ref|ZP_04518719.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis Nepal516] gi|270487386|ref|ZP_06204460.1| diaminopimelate decarboxylase [Yersinia pestis KIM D27] gi|294503019|ref|YP_003567081.1| diaminopimelate decarboxylase [Yersinia pestis Z176003] gi|21960112|gb|AAM86734.1|AE013919_7 diaminopimelate decarboxylase [Yersinia pestis KIM 10] gi|45437492|gb|AAS63043.1| diaminopimelate decarboxylase [Yersinia pestis biovar Microtus str. 91001] gi|108776808|gb|ABG19327.1| diaminopimelate decarboxylase [Yersinia pestis Nepal516] gi|108778383|gb|ABG12441.1| diaminopimelate decarboxylase [Yersinia pestis Antiqua] gi|115346587|emb|CAL19468.1| diaminopimelate decarboxylase [Yersinia pestis CO92] gi|145210691|gb|ABP40098.1| diaminopimelate decarboxylase [Yersinia pestis Pestoides F] gi|149289594|gb|EDM39671.1| diaminopimelate decarboxylase [Yersinia pestis CA88-4125] gi|152960988|gb|ABS48449.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP 31758] gi|162351775|gb|ABX85723.1| diaminopimelate decarboxylase [Yersinia pestis Angola] gi|165914849|gb|EDR33462.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis str. IP275] gi|165923280|gb|EDR40431.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990713|gb|EDR43014.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205981|gb|EDR50461.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str. B42003004] gi|166963371|gb|EDR59392.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050808|gb|EDR62216.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055709|gb|EDR65493.1| diaminopimelate decarboxylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229679376|gb|EEO75479.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis Nepal516] gi|229690226|gb|EEO82281.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis biovar Orientalis str. India 195] gi|229697064|gb|EEO87111.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704085|gb|EEO91097.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis Pestoides A] gi|262361055|gb|ACY57776.1| diaminopimelate decarboxylase [Yersinia pestis D106004] gi|262364999|gb|ACY61556.1| diaminopimelate decarboxylase [Yersinia pestis D182038] gi|270335890|gb|EFA46667.1| diaminopimelate decarboxylase [Yersinia pestis KIM D27] gi|294353478|gb|ADE63819.1| diaminopimelate decarboxylase [Yersinia pestis Z176003] gi|320014133|gb|ADV97704.1| diaminopimelate decarboxylase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 420 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 110/416 (26%), Positives = 172/416 (41%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + FD ++ +A KA SN +++ + G Sbjct: 16 NLIALPERFGCPVWAYDGDIIAERINQLR-HFD----VIRFAQKACSNIHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + + T D +D A + N+ + + + Sbjct: 71 KVDSVSLGEIERALHAGYQP-GQEPAEIVFTADLLDQATLLRVTELNIPVNAGSIDMLDQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI ++ Sbjct: 130 LGQQAPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEELPRALKKIEHYG-----LT 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I I + ++ + QQ+ + GH+I I GGGL I Y + Y Sbjct: 185 LVGIHMHIGSGVDYQHLEQVCDAMVQQVITLGHDISAISAGGGLSIPYQFGDDVIDTEHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + +EPGRFLVA+ G+L+ +V ++K + +V++D ND Sbjct: 245 YGLWNSARERIAAHLGHPVSLEIEPGRFLVAESGVLIAQVRAVKDMGRRHYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALNR-------KIALP 360 MRP +Y +YH I I + GP+CE+GD + Sbjct: 305 LMRPAMYGSYHHISLLPADGRDLTSAPLIDTVVAGPLCESGDVFTQQEGGGVETLALPAA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L TGAYGA S YNSR L+PE++ Q +IR R T +ELI+L+ + Sbjct: 365 VIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEKGQPRLIRRRQTIEELIDLERV 420 >gi|258652304|ref|YP_003201460.1| diaminopimelate decarboxylase [Nakamurella multipartita DSM 44233] gi|258555529|gb|ACV78471.1| diaminopimelate decarboxylase [Nakamurella multipartita DSM 44233] Length = 484 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 118/444 (26%), Positives = 190/444 (42%), Gaps = 37/444 (8%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G+L+ + L TP F++AF G V YA KA Sbjct: 42 QDGALNLAGLDARDLTARHGTPLMVIDEADFRSRCQDFADAFGGA-ASVHYAGKAFLCSE 100 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ LA G LD+ + GELR AL A P ERI G K+ E+ +A+Q I V+S Sbjct: 101 IVRWLADEGLSLDVCTSGELRLALRAGFPPERIALHGSNKSDAELAMAVQHRIGAIVVDS 160 Query: 127 ESELKTLNQ-RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHSLYA 183 E+ L P+ RV + A+TH+ I+T ++ KFG + Sbjct: 161 FHEIARLAGLVEDRASDPVPVMIRVTVGVEAHTHEFIATAHEDQKFGFSLTGGDAAEAAR 220 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL----RDLTQQLRSNGHNIQHIDVGGG 239 L G+++ G+ HIGSQI F A + R + ++ + I +D+GGG Sbjct: 221 RVLALSGLRLIGLHSHIGSQIFDPSGFEVAAHRVVGLLRTIVEEFPAAADTITTLDLGGG 280 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVIS 292 LGIAY SD PP+ A + + +++EPGR + + + +V + Sbjct: 281 LGIAYTSDDDPPAPDVMAKSLIEIVTRECQLAGLTVPAVMVEPGRAIAGPGTVTLYEVGT 340 Query: 293 IKKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 IK + +V +D M+D +R LYDA + + + + D + + +VG CE+ Sbjct: 341 IKDVTLDGGLTRRYVSVDGGMSDNIRTALYDAEY-TVTLASRSSDATPVLSRVVGKHCES 399 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG----------- 395 GD + + GDLL + TGAY S YN + V+G Sbjct: 400 GDIVVRECYLPADLAIGDLLAVAATGAYCYAMSSNYNRVPRPAVVAVSGQGTGGSAGTDG 459 Query: 396 ----SQFHIIRPRMTFQELIELDS 415 + ++ R T +L+ L++ Sbjct: 460 AAGGATDRVVLRRETDDDLMLLET 483 >gi|260911755|ref|ZP_05918329.1| diaminopimelate decarboxylase [Prevotella sp. oral taxon 472 str. F0295] gi|260634127|gb|EEX52243.1| diaminopimelate decarboxylase [Prevotella sp. oral taxon 472 str. F0295] Length = 387 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 135/377 (35%), Positives = 196/377 (51%), Gaps = 6/377 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSN-AFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TPFY Y + + + +V YA KAN+N +++ + G G+D V Sbjct: 10 ENLPTPFYYYDEGLLRATLDALNEQVARHPNFIVHYATKANANLRILQIIKEAGLGVDCV 69 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+ AL A A+ IVF+GVGK+ EI LAL++ I+CFNVES EL+ + Q + Sbjct: 70 SGGEIETALRAGFKADNIVFAGVGKSDWEIKLALENNIFCFNVESIQELEVIEQLCSEMN 129 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 ++A + RVNP++NA+THK I+TG E+KFGIP+ + V G+ HIG Sbjct: 130 QQADVCLRVNPNVNAHTHKNITTGLAENKFGIPVESVWEGIEKIQATKHVHFIGLHFHIG 189 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 SQI + F + + L + L+ + +HI+VGGGLGI Y P A Sbjct: 190 SQIVNLNDFRELCTSVNSLLELLKQHNIEPEHINVGGGLGIDYDDPTSHPIPDFKAYFDM 249 Query: 262 QYFG---NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 N + K+ E GR LV G LV++V+ +K+ K F+ILD MND +RP LY Sbjct: 250 YAQHLQLNERQKVHFELGRSLVGQCGYLVSRVLYVKQGQSKRFLILDAGMNDLLRPALYH 309 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A H+I + N D+VGP+CE+ D + + + GDL+ I GAYG V Sbjct: 310 AKHQIVNLSN--PSATSEVYDVVGPVCESSDVFSRDVLLPQSHRGDLMAICSAGAYGEVM 367 Query: 379 SGTYNSRLLIPEIMVNG 395 + YN R L + + Sbjct: 368 ASQYNCRQLPKSYLSDD 384 >gi|238764774|ref|ZP_04625716.1| Diaminopimelate decarboxylase [Yersinia kristensenii ATCC 33638] gi|238696972|gb|EEP89747.1| Diaminopimelate decarboxylase [Yersinia kristensenii ATCC 33638] Length = 420 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + FD ++ +A KA SN +++ + G Sbjct: 16 NLIALPERFGCPVWAYDGEVITQKINQLR-HFD----VIRFAQKACSNIHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + + T D +D A + N+ + + + Sbjct: 71 KVDSVSLGEIERALQAGFLP-GQEPAEIVFTADLLDHATLLRVTELNIPVNAGSIDMLDQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI + Sbjct: 130 LGQHAPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLTQAIEKIQQYG-----LT 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I I + ++ + QQ+ + G +I I GGGL I Y + Y Sbjct: 185 LVGIHMHIGSGVDYQHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHY 244 Query: 257 ASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L ++ + +EPGRFLVA+ G+L+ +V ++K + +V++D ND Sbjct: 245 YGLWNRAREKIAAYLGHAVSLEIEPGRFLVAESGVLIAQVRAVKNMGSRHYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH I I + GP+CE+GD R + Sbjct: 305 LMRPAMYGSYHHISLLPADGRLLAGEPLIDTVVAGPLCESGDVFTQEAGGGLETRALPAA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L TGAYGA S YNSR L+PE++ Q +IR R T +ELI L+ I Sbjct: 365 KIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIALELI 420 >gi|264680016|ref|YP_003279925.1| diaminopimelate decarboxylase [Comamonas testosteroni CNB-2] gi|262210531|gb|ACY34629.1| diaminopimelate decarboxylase [Comamonas testosteroni CNB-2] Length = 415 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 116/400 (29%), Positives = 180/400 (45%), Gaps = 20/400 (5%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA TP + Y I + AFD V +A KA SN ++K + G +D Sbjct: 13 LADQYGTPLWVYDAATIRERIAQLK-AFD----TVRFAQKACSNIHILKLMREQGVKVDA 67 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RALAA + + T D +D A + + V + + + ++ Sbjct: 68 VSRGEVLRALAAGFTPGFGEPADIVFTADVMDEATLATVVEHQVPVNAGSIDMLHQLAAV 127 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 K + R+NP K +TG + K GI H + A G+ ++G+ MHI Sbjct: 128 SKGHHVWLRINPGFGHGHSNKTNTGGEHSKHGIW-HSELEVALDAIKAGGLVLAGLHMHI 186 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 GS + + + L ++ ++ G ++ I GGGL I Y ++ Y L Sbjct: 187 GSGV-DYGHLQEVCGAMVKLVERTKAAGVDLHAISAGGGLSIPYKQGDATIDTNHYHGLW 245 Query: 261 HQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + LEPGRFLVA+ G+L+ V + K + FV++D N+ MRP Sbjct: 246 DAARKQAEGIVGHSLGLELEPGRFLVAESGVLLGTVRATKNAGSNHFVLVDTGFNELMRP 305 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGDLLY 367 ++Y +YH + + + + GP+CE+GD R +A GDLL Sbjct: 306 SMYGSYHGMEVLRRDGQSLPAQDSVVAGPLCESGDVFTQGDGGVVLPRSLAGASVGDLLV 365 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 I TGAYG+ S YN+R L E++V+G+Q +IR R T Sbjct: 366 IHDTGAYGSSMSSNYNTRPLAAEVLVDGAQSQLIRRRQTV 405 >gi|296393110|ref|YP_003657994.1| diaminopimelate decarboxylase [Segniliparus rotundus DSM 44985] gi|296180257|gb|ADG97163.1| diaminopimelate decarboxylase [Segniliparus rotundus DSM 44985] Length = 451 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 106/423 (25%), Positives = 194/423 (45%), Gaps = 18/423 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G++ V +++L +P + ++ A + V YA KA + + Sbjct: 28 DGAVRLAGVRVDELIERYGSPLFVVDKDDFHTRCRRWAEALGPRN--VHYASKAFLSGQL 85 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 L G LD+ S GEL AL P R+ G K++ E+ A+ G+ ++S Sbjct: 86 AHWLDQEGLALDVCSGGELAIALRGGFPPNRMTLHGNNKSVAELRRAVDVGVEAVVLDSF 145 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E++ L+ LG++ + R+ + A+TH+ I+T ++ KFG + + A Sbjct: 146 EEIERLDAACAELGREQDVLVRLTVGVQAHTHEAIATAHEDQKFGFSVASGAAAEAVRRV 205 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG---HNIQHIDVGGGLGI 242 L P +++ G HIGSQI +++ F A + + + ++ +D+GGGLG+ Sbjct: 206 LARPRLRLIGFHSHIGSQILELDGFRLAAQRVAAFADEAVRGFGPIPTLRVLDLGGGLGV 265 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQC----KIILEPGRFLVADVGILVTKVISIKKS-- 296 AY RPP ++ A + + + +EPGR ++A + + V ++K Sbjct: 266 AYQLGERPPEPAELAEAVRKEVEQYPAAARLSVAVEPGRSIMASGTVTLYTVGTVKDVVL 325 Query: 297 ---ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 A + +V +D M+D +RP LY A+++ + AG + +VG CETGD + Sbjct: 326 EGGAIRKYVSVDGGMSDNIRPALYGAHYDARLVSR-AGAAEPAQSRVVGKHCETGDIVVR 384 Query: 354 NRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 + + PGD++ + TGAY S YN+ + V + ++ R T +L+ Sbjct: 385 DCLLPEDVAPGDIVAVASTGAYCYSLSSRYNALCRPAVVAVEDGRSWLMLRRETEADLLS 444 Query: 413 LDS 415 L+ Sbjct: 445 LEV 447 >gi|254821292|ref|ZP_05226293.1| LysA_2 [Mycobacterium intracellulare ATCC 13950] Length = 472 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 113/429 (26%), Positives = 192/429 (44%), Gaps = 22/429 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 G V++ LA TP + ++AF G V YA KA Sbjct: 45 EGGVASIAGVAVTDLAQEYGTPLFVVDEDDFRSRCREIASAFGGGK-NVHYAAKAFLCSE 103 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + + G LD+ + GEL AL A P ERI F G K++ E+ A+++G+ ++S Sbjct: 104 IARWIDEEGLSLDVCTGGELAVALHANFPPERITFHGNNKSVAELTAAVKAGVGHVVLDS 163 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--Y 184 +E++ LN A G + R+ + A+TH+ IST ++ KFG+ + +L A Sbjct: 164 MTEIERLNTIAGEAGIVQDVFVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAALAAVGR 223 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH-----IDVGGG 239 +++ G+ HIGSQI + F A + + L + + +D+GGG Sbjct: 224 VFEAEHLRVVGLHSHIGSQIFDVAGFELAARRVLGLLHEAVEQFGVEKTAQISTVDLGGG 283 Query: 240 LGIAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-- 290 LGI+Y + PP + A + G ++++EPGR + I + +V Sbjct: 284 LGISYLAADDPPPMGELAAKLSAIVKNESEAVGLPTPRLVVEPGRAIAGPGTITLYEVGT 343 Query: 291 ---ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 + + +A + +V +D M+D +R LYDA ++ + D A +VG CE+ Sbjct: 344 VKDVDVSATAHRRYVSVDGGMSDNIRTALYDAQYDARLVSR-LSDAPAELARVVGKHCES 402 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 GD + + + PGDL+ + TGAY S YN + V + ++ R T Sbjct: 403 GDIVVRDTWVPGDLHPGDLIGVAATGAYCYSLSSRYNMVCRPAVVAVRDRRARLLLRRET 462 Query: 407 FQELIELDS 415 +L+ L+ Sbjct: 463 VDDLLSLEV 471 >gi|300936236|ref|ZP_07151169.1| diaminopimelate decarboxylase [Escherichia coli MS 21-1] gi|300458561|gb|EFK22054.1| diaminopimelate decarboxylase [Escherichia coli MS 21-1] Length = 420 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 174/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVLEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I+ + + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEYAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRVLPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|322613414|gb|EFY10355.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621006|gb|EFY17864.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624069|gb|EFY20903.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628191|gb|EFY24980.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633310|gb|EFY30052.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636112|gb|EFY32820.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639450|gb|EFY36138.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643689|gb|EFY40241.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648801|gb|EFY45248.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653857|gb|EFY50183.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657963|gb|EFY54231.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664065|gb|EFY60264.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667033|gb|EFY63205.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673083|gb|EFY69190.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677927|gb|EFY73990.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681102|gb|EFY77135.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685698|gb|EFY81692.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194837|gb|EFZ80024.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196588|gb|EFZ81736.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204999|gb|EFZ89982.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207800|gb|EFZ92746.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212648|gb|EFZ97465.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214869|gb|EFZ99617.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222600|gb|EGA06965.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225120|gb|EGA09372.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230643|gb|EGA14761.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235007|gb|EGA19093.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239045|gb|EGA23095.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244597|gb|EGA28603.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247212|gb|EGA31178.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253305|gb|EGA37134.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256388|gb|EGA40124.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262436|gb|EGA45992.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267468|gb|EGA50952.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269128|gb|EGA52583.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 420 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 124/433 (28%), Positives = 190/433 (43%), Gaps = 30/433 (6%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 54 KACSNIHILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++ + + + + + RVNP +K +TG + K GI + Sbjct: 113 SELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ K + I I + ++ + +Q+ G +++ I GGG Sbjct: 173 -----AALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I Y P + Y L + K+ +EPGRFLVA G+LVT+V S+ Sbjct: 228 LSIPYREGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 288 KQMGSRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR Sbjct: 348 FTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T +EL+ L+ Sbjct: 408 RQTIEELLVLEMF 420 >gi|256370697|ref|YP_003108522.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri SMDSEM] gi|256009489|gb|ACU52849.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri SMDSEM] Length = 402 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 120/406 (29%), Positives = 190/406 (46%), Gaps = 21/406 (5%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHL 74 ++ KL TP Y Y+ IE Y +F + + + YA KAN+N +++K L L Sbjct: 3 INFHKLTKKYGTPLYVYNAKKIEDQYKLMKKSFSYIKNFKINYACKANTNISILKFLKKL 62 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 GSGLD VS E+ L A + I+++ G +++EI A+++G+ L Sbjct: 63 GSGLDTVSIQEVEIGLKAGFKPKEIIYTPNGVSLEEIKKAIKAGVLINLDNLS-----LL 117 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 ++ + PI R+ P I +KKIS G + KFGI +Q+ + KI Sbjct: 118 EQIGNEKTNYPIGIRITPHIMGGGNKKISVGHIDSKFGISYYQLPHIKKIIKNTGL-KIE 176 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+ MH GS I + F + + L ++ ++ ++ID G G + Y Sbjct: 177 GIHMHTGSDIIDMGVFFQIAERLLNVANLFKTL----KYIDFGSGFKVPYKQSDYKTDLD 232 Query: 255 DYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 A + + + K+ EPG+FL+++ G + KV IK++ F +D Sbjct: 233 LLAFFLKKKLSIFFEKNYYKKIKLFFEPGKFLMSESGFFLVKVNVIKQTTSTVFACVDSG 292 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 N F+RP YD+YH+I+ I NP G +VG ICE+ D +NR I R GD+L Sbjct: 293 FNHFIRPMFYDSYHQIDNISNPLGKLRF--YTVVGYICES-DTFCVNRPINEIREGDILC 349 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 GAY S YNSR E+++ + +IR R Q+L+ Sbjct: 350 FRNAGAYCFSMSSHYNSRYKPAEVLLYKKKDFLIRKRENMQDLLNN 395 >gi|323188745|gb|EFZ74030.1| diaminopimelate decarboxylase [Escherichia coli RN587/1] Length = 420 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 113/416 (27%), Positives = 173/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVLEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + SQ +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNSQARLIRRRQTI 411 >gi|302337975|ref|YP_003803181.1| Orn/DAP/Arg decarboxylase 2 [Spirochaeta smaragdinae DSM 11293] gi|301635160|gb|ADK80587.1| Orn/DAP/Arg decarboxylase 2 [Spirochaeta smaragdinae DSM 11293] Length = 420 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 98/410 (23%), Positives = 161/410 (39%), Gaps = 16/410 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 +E+LA + TPF+ Y AI +N AF +A+KA N ++ L G Sbjct: 13 IERLADTLPTPFHLYDEAAILENARYIKKAFAWAPGFKNYFAVKACPNPTILDLLHKEGF 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + + + E ++F+ +E A + G + Sbjct: 73 GTDCSSLPELILSEKSGIAGEEVMFTSNDTPAEEFKEAKRLGAIINLDDISHIDFLEKAA 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + +A + I KE K+GI QI Y A + Sbjct: 133 GIPELICFRYNPG-----DARSGNVIIGEPKEAKYGITRDQILDAYRMAKEKGAKRFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M ++++ L + G ++ +++GGG+GI Y D P Sbjct: 188 TMVASNELNPEYFIETGRMLFELAVKIKEELGIKLEFVNLGGGIGIPYRLDQEPVDLVRV 247 Query: 257 ASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + I ++ + I++E GR + G L+T+V I K KT+V LD +M Sbjct: 248 SEGIKGWYDKMIVPAGLDPLKIVMECGRVVTGPYGYLITRVRHIAKK-YKTYVGLDASMA 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + + + D+ G +CE D A++R + GDL+ I Sbjct: 307 NLMRPAIYGAYHHITVLGK-ENEPPAMVCDVTGSLCENNDKFAIDRNLPEIEVGDLIAIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNG-SQFHIIRPRMTFQELIELDSIPA 418 GA+G YN +L E+++ +IR T +L P Sbjct: 366 DAGAHGYAMGFNYNGKLRSAEVLIKDPETVELIRRAETMDDLFATLRFPG 415 >gi|295394644|ref|ZP_06804863.1| diaminopimelate decarboxylase [Brevibacterium mcbrellneri ATCC 49030] gi|294972537|gb|EFG48393.1| diaminopimelate decarboxylase [Brevibacterium mcbrellneri ATCC 49030] Length = 479 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 116/430 (26%), Positives = 184/430 (42%), Gaps = 23/430 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYALK 60 +G L S++ +AH +P + + + F+ +FD GM YA K Sbjct: 39 KDGVLTVCGHSVQDVAHTFGSPVFVFDVDDFQTRARDFAESFDREFAANGMTARGYYAGK 98 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A AV + G G+D + GE+ A AA V R+ G K+ E+++A+ GI Sbjct: 99 AFLCTAVARWATEAGLGVDTCTLGEMLTARAAGVDPGRVGLHGNNKSDAELEMAVSWGIG 158 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQI 178 V+S E+ + + A G AP+ RV + A+TH I+T ++ KFG+ + Q Sbjct: 159 RIVVDSLDEIPRVERIAERCGVTAPVMVRVTVGVEAHTHDFIATAHEDQKFGLSLASGQA 218 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVG 237 P + + G+ HIGSQI E F A + L R G + +D+G Sbjct: 219 LEACKKVLKSPHLDLVGLHSHIGSQIFDAEGFILAATRVIRLRATLQRDFGAPVAEVDLG 278 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKV 290 GG GI Y S P S +D A + + + EPGR +V + +V Sbjct: 279 GGFGIRYTSQDTPSSFADMARKLARAVVRACEDEDTDLPNVSFEPGRAIVGPAAFTLYEV 338 Query: 291 IS----IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + ++ +T+V +D M+D R LYDA + + N D I +VG CE Sbjct: 339 GTIKPVHTENGVRTYVSIDGGMSDNARTALYDADYSCT-LANRRSDAEPIVVRVVGKHCE 397 Query: 347 TGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ-FHIIRPR 404 +GD + + + GDL+ + TGAY + YN + V + + I Sbjct: 398 SGDIVVRDEYLPSDVSAGDLIAVPDTGAYCKPLASNYNLVPRPGVLAVEEGRDPYWIVQP 457 Query: 405 MTFQELIELD 414 T+ +L D Sbjct: 458 ETYSDLFATD 467 >gi|184200609|ref|YP_001854816.1| diaminopimelate decarboxylase [Kocuria rhizophila DC2201] gi|183580839|dbj|BAG29310.1| diaminopimelate decarboxylase [Kocuria rhizophila DC2201] Length = 483 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 121/436 (27%), Positives = 191/436 (43%), Gaps = 31/436 (7%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYALKAN 62 G + + + + +LA +P Y S AFD G+ V YA KA Sbjct: 40 GCVTVDGIPVTELAQRHGSPAYVVSERTFRSRARRVREAFDAALEPLGVQVAVYYASKAL 99 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 +V + G G+D S GEL ALAA VP ERI G K+ +E+ AL +G+ Sbjct: 100 LCTSVARWAVAEGLGIDTASGGELAVALAAGVPGERIALHGNNKSAEELSAALDAGVGRI 159 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI---- 178 V+S E++ L A G +AP+ RV P ++A+TH+ I+T ++ KFG+ +H Sbjct: 160 VVDSLPEVELLATLARQRGTRAPVMLRVTPGVHASTHEFIATAHEDQKFGLSLHAAADGE 219 Query: 179 -----HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQ 232 ++ A + +++ G+ HIGSQI E F +A + + L + + + Sbjct: 220 DSPALQAVAACLAQDDALELRGLHCHIGSQIFAAEGFAQAAERVLALRETVAGRWGLALP 279 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGI 285 ID+GGG G+AY + +D A + + EPGR++ G Sbjct: 280 EIDLGGGHGVAYTAADSAREITDIAGDLASLLAKALETSQLPAPHLSFEPGRYIAGPSGC 339 Query: 286 LVTKVISIKKSAD-----KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI 340 V V ++K + +V +D M+D RP LYDA + + N + + + Sbjct: 340 TVYTVGTVKTVTVSPGVQRRYVSVDGGMSDNARPVLYDADY-TAVLANRVSPEAPVLSRV 398 Query: 341 VGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQF 398 VG CE+GD + + + GDLL + TGAY S YN + V Sbjct: 399 VGKHCESGDVVVKDVYLPGDVHRGDLLVVPVTGAYCWSLSSNYNWLPRPGIVAVGEDGVP 458 Query: 399 HIIRPRMTFQELIELD 414 I R + +L+ D Sbjct: 459 REIVRRESMADLLARD 474 >gi|167747269|ref|ZP_02419396.1| hypothetical protein ANACAC_01983 [Anaerostipes caccae DSM 14662] gi|167653247|gb|EDR97376.1| hypothetical protein ANACAC_01983 [Anaerostipes caccae DSM 14662] Length = 416 Score = 220 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 157/404 (38%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I + + AF +A+KA N ++K L G Sbjct: 12 LDEIVKKYPTPFHLYDEKGIRETARNLNKAFSWNKGFKEYFAVKATPNPTILKILKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+FS +E LA + G + Sbjct: 72 GTDCSSLTELMMSDRCGFDGSEIMFSSNDTPAEEFVLAKKLGATINLDDITHIDFLKEAA 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + I+ R NP + I + K+G+ Q+ + L + Sbjct: 132 GIPEV----ISCRYNPGGVFSLGTDIMDNPGDAKYGMTRAQMTEAFLKLKELGVKEFGIH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G +I I++ GG+G+ Y D + Sbjct: 188 SFLASNTVTNEYYPTLAKQLFELAVELQKETGVHIGFINLSGGVGVPYLPDQEGNDIAVI 247 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ F KI E GR+++A G LVTK I K + K ++ +D Sbjct: 248 GEGVHKAFDEVLVPAGMGDVKIFTELGRYMLAPNGHLVTKAIHEKHT-HKEYIGVDACAV 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H+ DI G +CE D A++RK+ GDLL I Sbjct: 307 NLMRPAMYGAYHHITVVGKENEPCDHM-YDITGSLCENNDKFAIDRKLPEIENGDLLVIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L EI++ +IR T ++ Sbjct: 366 DTGAHGFAMGYNYNGKLKSAEILLKEDGSTEMIRRAETPEDYFA 409 >gi|300790779|ref|YP_003771070.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] gi|299800293|gb|ADJ50668.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] Length = 447 Score = 220 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 114/422 (27%), Positives = 181/422 (42%), Gaps = 21/422 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L + LA TP Y + + A D V YA KA +A Sbjct: 31 EDGELLFAGAPVSHLAARFGTPSYLIDEQQVRDTAREYREALP--DVEVAYASKALCTRA 88 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V++ +A G LD S GE+ A + PAER++ G KT +++ AL G+ V+S Sbjct: 89 VLRWVAEEGLSLDTCSAGEIAVARSVGFPAERMLLHGNAKTPEDLKAALGYGVRRIVVDS 148 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA- 185 E++ L A + RV P + A H ISTG + KFG + A Sbjct: 149 LDEIEQLGALAHGAQ---QVMIRVTPGVAAGAHAAISTGTEGQKFGFSLLDGVPDNVDAA 205 Query: 186 ----STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGL 240 PG+++ G+ HIGSQ+ +++ + A + + ++ ++R ++ +D+GGG Sbjct: 206 VEAVKRQPGLRLRGLHCHIGSQVSRVDRYEAAARRMAEVLVRIRDTHGVTLRELDLGGGH 265 Query: 241 GIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 + Y Y+ ++ +EPGR +V GI V +V ++ Sbjct: 266 AVPYVGGEPAFDLGGYSRRLRVALAYECAAHRFPLPRLTIEPGRAIVGPAGITVYRVCAV 325 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K +TFV +D M+D RP+LY A + + + +VG CE GD +A Sbjct: 326 K-RGSRTFVAVDGGMSDNARPSLYGARYTTRLVGR-RSTAKRLPMTVVGRHCEAGDVLAD 383 Query: 354 NRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 + GDLL + TGAY + YN P I V G ++ R T ++L Sbjct: 384 GISLPADLHAGDLLAVPCTGAYHHSLASNYNQVGRPPLIGVRGGVATLLVRRETEEDLGR 443 Query: 413 LD 414 D Sbjct: 444 RD 445 >gi|302853272|ref|XP_002958152.1| DAP decarboxylase [Volvox carteri f. nagariensis] gi|300256513|gb|EFJ40777.1| DAP decarboxylase [Volvox carteri f. nagariensis] Length = 462 Score = 220 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 126/405 (31%), Positives = 210/405 (51%), Gaps = 15/405 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 +G ++ + + +E + V +PFY YS I NY + A +G+ ++ CYA+KAN+N Sbjct: 61 EDGYMYVDQLRVEDIRRQVPESPFYLYSKNRIMHNYQAYKKALEGLSSLPCYAVKANNNL 120 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 ++K LA G+G +VS EL+ A+AA R +F+G GK E++LA + G+ Sbjct: 121 IIMKELAAAGAGAVLVSGNELKMAMAAGFDPSRTIFNGNGKLPWELELAAEKGVLINIDS 180 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 +L+ + A GKK + R+NPD++ H +STG KFGI I Sbjct: 181 EF-DLQNIAAAARKTGKKVKVLLRINPDVDPQVHPYVSTGLAGSKFGIRNSHIGWFLEAI 239 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY- 244 P +++ GV H+GS I ++ F A ++ + + +RS G N+Q++++GGGLGI Y Sbjct: 240 RAEPLLELVGVHSHLGSTITKVNIFRDAAVIMCEFVKMIRSEGFNLQYLNIGGGLGIDYS 299 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 H P+ +D + L +++EPGR + +K + +K F+++ Sbjct: 300 HQGQVLPTPTDLIDTVRDIVKELGLTLVIEPGRSM---------GRRRVKTNGNKHFIVI 350 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D +M +RP+LY AY I + + D+VGPICE+GD++ +R++ P+PGD Sbjct: 351 DGSMATLIRPSLYGAYQHIE--LTKPSNAPMETFDVVGPICESGDYLGKDRQLPTPQPGD 408 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQ 408 L + GAY + YN ++ E +V G + IR T + Sbjct: 409 GLVVHDAGAYCMSMASNYNLKMRPAEYLVEEGGKLRKIRHEETLE 453 >gi|317497192|ref|ZP_07955517.1| diaminopimelate decarboxylase [Lachnospiraceae bacterium 5_1_63FAA] gi|316895518|gb|EFV17675.1| diaminopimelate decarboxylase [Lachnospiraceae bacterium 5_1_63FAA] Length = 416 Score = 220 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 101/404 (25%), Positives = 155/404 (38%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I + AF +A+KA N ++K L G Sbjct: 12 LDEIVKKYPTPFHLYDEKGIRETARGLYKAFSWNKGFKEYFAVKATPNPTILKILKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+FS +E LA Q G + + Sbjct: 72 GTDCSSLTELMMSDRCGFDGSEIMFSSNDTPAEEFILAKQLGATINLDDITH----IEFL 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G I+ R NP I + K+G+ QI + L + Sbjct: 128 KECAGIPEKISCRYNPGGVFALGTDIMDNPGDAKYGMTTEQIFEAFKQLKELGVKEFGIH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G +I I++ GG+GI Y D + Sbjct: 188 SFLASNTVTNEYYPTLAKQLFELAVKLKEEVGVHIGFINLSGGVGIPYLPDQEGNDIAVI 247 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + KI E GR+++A G LVTK I K + K ++ +D Sbjct: 248 GEGVHKVYDEVLVPAGMGDVKIFTELGRYMLAPNGHLVTKAIHEKHT-HKEYIGVDACAV 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H+ DI G +CE D A++RK+ GDLL I Sbjct: 307 NLMRPAMYGAYHHITVMGKENEPADHV-YDITGSLCENNDKFAIDRKLPKIDIGDLLVIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L EI++ +IR T ++ Sbjct: 366 DTGAHGFAMGYNYNGKLKSAEILLKEDGTTEMIRRAETPEDYFA 409 >gi|284007782|emb|CBA73630.1| diaminopimelate decarboxylase [Arsenophonus nasoniae] Length = 414 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 111/414 (26%), Positives = 180/414 (43%), Gaps = 27/414 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L KL TP + Y + I + +AFD ++ +A KA SN +++ + G Sbjct: 6 LIKLPTQFGTPIWIYDSEVITQAIKQL-SAFD----VIRFAQKACSNIHILRLMREQGVK 60 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ RAL A + + T D I+ + ++ + + Sbjct: 61 VDAVSLGEIERALVAGFRP-GSEKAEIVFTADVIEKQTIERVIELDIPVNVGSIDMLVQL 119 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + PI R+NP +K +TG + K GI + + + Sbjct: 120 GKAKRHHPIWLRINPGFGHGHSQKTNTGGENSKHGIWFSDLPLAIEKINQY-----QLML 174 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + I + K+ + +Q+ +G +IQ I GGGL I YH + Y Sbjct: 175 VGMHMHIGSGVDYCHLAKVCDAMVEQVILSGCDIQAISAGGGLSIPYHLAEERIDINHYF 234 Query: 258 SLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 +L H + +EPGR+LVA+ G+L+ +V ++K+ ++++D ND Sbjct: 235 ALWHGARERISAYLGHPITLEIEPGRYLVAESGVLLAEVRAVKRMGKNHYILVDSGFNDL 294 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHAD---IVGPICETGDFIAL-------NRKIALPR 361 MRPT+Y YH I+ + D + + + GP+CE+GD R + Sbjct: 295 MRPTMYGCYHHISVLAADNRDLTNENLRETLVAGPLCESGDVFTQANNGAVVPRLLPEIY 354 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD L TGAYGA S YNSR LI E+M + +IR R T EL+ L++ Sbjct: 355 VGDYLVFHDTGAYGASMSSNYNSRPLIAEVMYLNGEPKLIRRRQTLAELLALET 408 >gi|332160552|ref|YP_004297129.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664782|gb|ADZ41426.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 420 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 118/416 (28%), Positives = 180/416 (43%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I N FD ++ +A KA SN +++ + G Sbjct: 16 NLIALPERFGCPVWAYDGEIITSKINQLWN-FD----VIRFAQKACSNIHILRLMHEQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + + T D +D A + ++ + + + Sbjct: 71 KVDSVSLGEIERALQAGFQP-GQEPAEIVFTADLLDQATLLRVTELSIPVNAGSIDMLDQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI + A K+ G+ Sbjct: 130 LGLHASGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIAKIQQYGL-KLVGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + ++ + QQ+ + G +I I GGGL I Y + Y Sbjct: 189 HMHIGSGV----DYQHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + +EPGRFLVA+ G+L+ +V ++K + +V++D ND Sbjct: 245 YGLWNSARERIAAHLGHPVSLEIEPGRFLVAEAGVLIAQVRAVKNMGRRHYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH I + I + GP+CE+GD RK+ Sbjct: 305 LMRPAMYGSYHHISVLPADGRSLANEPLIDTVVAGPLCESGDVFTQEAGGGLETRKLPAA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L TGAYGA S YNSR L+PE++ Q +IR R T +ELI L+ I Sbjct: 365 NIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIALELI 420 >gi|317471013|ref|ZP_07930390.1| diaminopimelate decarboxylase [Anaerostipes sp. 3_2_56FAA] gi|316901524|gb|EFV23461.1| diaminopimelate decarboxylase [Anaerostipes sp. 3_2_56FAA] Length = 416 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 156/404 (38%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+ + TPF+ Y I + + AF +A+KA N ++K L G Sbjct: 12 LDDIVKKYPTPFHLYDEKGIRETARNLNKAFSWNKGFKEYFAVKATPNPTILKILKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+FS +E LA + G + Sbjct: 72 GTDCSSLTELMMSDRCGFDGSEIMFSSNDTPAEEFVLAKKLGATINLDDITHIDFLKEAA 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + I+ R NP + I + K+G+ Q+ + L + Sbjct: 132 GIPEV----ISCRYNPGGVFSLGTDIMDNPGDAKYGMTRAQMTEAFLKLKELGVKEFGIH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G +I I++ GG+G+ Y D + Sbjct: 188 SFLASNTVTNEYYPTLAKQLFELAVELQKETGVHIGFINLSGGVGVPYLPDQEGNDIAVI 247 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ F KI E GR+++A G LVTK I K + K ++ +D Sbjct: 248 GEGVHKAFDEVLVPAGMGDVKIFTELGRYMLAPNGHLVTKAIHEKHT-HKEYIGVDACAV 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H+ DI G +CE D A++RK+ GDLL I Sbjct: 307 NLMRPAMYGAYHHITVVGKENEPCDHM-YDITGSLCENNDKFAIDRKLPEIENGDLLVIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L EI++ +IR T ++ Sbjct: 366 DTGAHGFAMGYNYNGKLKSAEILLKEDGSTEMIRRAETPEDYFA 409 >gi|297744419|emb|CBI37681.3| unnamed protein product [Vitis vinifera] Length = 399 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 125/388 (32%), Positives = 207/388 (53%), Gaps = 4/388 (1%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY YS I +N+ + A +G+ +++ YA+KAN+N +++ L LG G +VS ELR Sbjct: 8 PFYLYSKPQITRNFEAYKEALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELR 67 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A R +F+G GK ++++ LA Q G++ ++ ++ GKK + Sbjct: 68 LALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIA-GKKVNVL 126 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV-KISGVDMHIGSQIDQ 206 R+NPD++ H ++TG K KFGI ++ P K+ G H+GS I + Sbjct: 127 LRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITK 186 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-AYHSDHRPPSSSDYASLIHQYFG 265 ++ F A L+ + ++R+ G I ++++GGGLGI YH+ P+ D + + Sbjct: 187 VDIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVL 246 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + +I+EPGR L+A+ LV +V +K + K FV++D +M + +RP+LYDAY I Sbjct: 247 SRDLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIEL 306 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + P D D+VGP+CE+ DF+ +R++ P G L + GAY + TYN + Sbjct: 307 VSPPPSDAQISTFDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASTYNLK 366 Query: 386 LLIPEIMV-NGSQFHIIRPRMTFQELIE 412 + PE V + IR TF++ + Sbjct: 367 MRPPEYWVEDDGSMSKIRHGETFEDHVR 394 >gi|297745130|emb|CBI38969.3| unnamed protein product [Vitis vinifera] Length = 399 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 125/388 (32%), Positives = 208/388 (53%), Gaps = 4/388 (1%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY YS I +N+ + A +G+ +++ YA+KAN+N +++ L LG G +VS ELR Sbjct: 8 PFYLYSKPQIARNFEAYREALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELR 67 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A R +F+G GK ++++ LA Q G++ ++ ++ GKK + Sbjct: 68 LALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIA-GKKVNVL 126 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV-KISGVDMHIGSQIDQ 206 R+NPD++ H ++TG K KFGI ++ P K+ G H+GS I + Sbjct: 127 LRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITK 186 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-AYHSDHRPPSSSDYASLIHQYFG 265 ++ F A L+ + ++R+ G I ++++GGGLGI YH+ P+ D + + Sbjct: 187 VDIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVL 246 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + +I+EPGR L+A+ LV +VI +K + K FV++D +M + +RP+LYDAY I Sbjct: 247 SRDLNLIIEPGRSLIANTCCLVNRVIGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIEL 306 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + P D D+VGP+CE+ DF+ +R++ P G L + GAY + +YN + Sbjct: 307 VSPPPSDAQISTFDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASSYNLK 366 Query: 386 LLIPEIMV-NGSQFHIIRPRMTFQELIE 412 + PE V + IR TF++ + Sbjct: 367 MRPPEYWVEDDGSVSKIRHGETFEDHVR 394 >gi|238787278|ref|ZP_04631077.1| Diaminopimelate decarboxylase [Yersinia frederiksenii ATCC 33641] gi|238724540|gb|EEQ16181.1| Diaminopimelate decarboxylase [Yersinia frederiksenii ATCC 33641] Length = 420 Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 109/416 (26%), Positives = 173/416 (41%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + + FD ++ +A KA SN ++ + + G Sbjct: 16 NLIALPERFGCPVWAYDGDIITQKINQLRS-FD----VIRFAQKACSNIHILGLMRNQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + + T D +D A + ++ + + ++ Sbjct: 71 KVDSVSLGEIERALQAGFQP-GQEPAEIVFTADLLDQATLLRVTELHIPVNAGSIDMLEQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI + Sbjct: 130 LGQHAPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPLAIKKIEQYG-----LT 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I I + ++ + QQ+ G +I I GGGL I Y + Y Sbjct: 185 LVGIHMHIGSGVDYQHLEQVCDAMVQQVIDLGQDISAISAGGGLSIPYQFGDDEIDTEHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + +EPGRFL+A+ G+L+ +V ++K + +V++D ND Sbjct: 245 YGLWNSARERIAAHLGHPVSLEIEPGRFLMAESGVLIAQVRAVKDMGRRHYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH I D I + GP+CE+GD R + + Sbjct: 305 LMRPAMYGSYHHISLLPADGRSLADEPLIETVVAGPLCESGDVFTQEAGGGLETRALPMA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L TGAYGA S YNSR L+PE++ Q +IR R T +ELI L+ Sbjct: 365 KIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIALEQF 420 >gi|126640100|ref|YP_001083087.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 17978] gi|126373831|gb|ABO13852.1| YPPCP.09C-like protein [Acinetobacter baumannii ATCC 17978] Length = 416 Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 114/412 (27%), Positives = 188/412 (45%), Gaps = 23/412 (5%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA TP + Y I + FD +V +A KANSN +++ + G +D Sbjct: 12 LAQQFSTPLWIYDADTITRQIAALQ-LFD----VVRFAQKANSNTHILRLMKRQGVVVDS 66 Query: 81 VSEGELRRALAAPV-PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 VS GE+ RALA+ P + + T D +D A + + N+ + + + Sbjct: 67 VSLGEIERALASGFTPGLHNGHADIVFTADLLDRATLARVVELNIPVNCGSMDMLDQLGA 126 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + P+ R+NP KK +TG + K GI + + + G+ MH Sbjct: 127 VNPGHPVWLRINPGFGHGHSKKTNTGGEHSKHGIWHGDLVRACEKIK-SNSLTLHGLHMH 185 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 IGS + + + L + + + G ++ I GGGL + Y + + Y SL Sbjct: 186 IGSGV-DYTHLQEVCGAMLKLVEVVNAQGLDLHAISAGGGLSVPYQTGEPTIDIAHYFSL 244 Query: 260 IHQYFG------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + K+ +EPGR+L+A+ G+LVT+V + K+ F+++D ND +R Sbjct: 245 WNAARHAVEQLLEHPVKLEIEPGRYLMAESGVLVTEVRATKQQGANHFLMVDAGFNDLVR 304 Query: 314 PTLY--DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-------NRKIALPRPGD 364 P LY E+ + A + L + GP+CE+GD +R + + GD Sbjct: 305 PALYGAYHGMELIHSDGTAVNGLQFDTVVAGPLCESGDVFTQGDGGVVLHRSLPQAQVGD 364 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 LL + TGAYGA S YN+R LI E+++ + +IR R T EL+ L+++ Sbjct: 365 LLVLHDTGAYGASMSSNYNARPLIAEVLMENGEPRLIRRRQTVAELLALEAV 416 >gi|293412184|ref|ZP_06654907.1| diaminopimelate decarboxylase [Escherichia coli B354] gi|291468955|gb|EFF11446.1| diaminopimelate decarboxylase [Escherichia coli B354] Length = 420 Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPVEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVLEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|117927837|ref|YP_872388.1| diaminopimelate decarboxylase [Acidothermus cellulolyticus 11B] gi|117648300|gb|ABK52402.1| diaminopimelate decarboxylase [Acidothermus cellulolyticus 11B] Length = 500 Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 116/416 (27%), Positives = 188/416 (45%), Gaps = 19/416 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V L +A TP Y T + AF+G V YA KA + Sbjct: 44 DGEIRVGGVDLRAVAAEFGTPCYVIDETDFRSRCRRWRTAFEG--ATVYYAAKALLTLGI 101 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A GLD+ + EL AL A V RIVF G K+ E+ ALQ+G+ +++ Sbjct: 102 ARWVADEQLGLDVCTGDELAVALRAGVDPARIVFHGNNKSDAELRTALQAGVGRIVIDAF 161 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 +EL+ L LG + + RV + A+TH+ I+T ++ KFG + +L A Sbjct: 162 AELRRLAALGAELGVRPDVLIRVTVGVEAHTHEFIATAHEDQKFGFSLAGGQALAAVTEA 221 Query: 188 LPGV--KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L ++ G+ HIGSQI F A + L + +R + +++GGG+G+AY Sbjct: 222 LGATSLRLVGLHSHIGSQIFDTAGFEVAAHRVVGLLRTIRDQHGIELPELNLGGGVGVAY 281 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 +D P +++A+ + ++ +EPGR + + V +V ++K Sbjct: 282 TADDDPVDVAEFAAQVRAIVERECAAAGLAVPRLAVEPGRAIAGPPVLTVYRVGTVKPVD 341 Query: 298 -----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 +T+V +D M+D +R LYDA + N I A +VG CE GD + Sbjct: 342 LGGGFVRTYVSVDGGMSDNIRAALYDAAYTCAL-ANRRAAGEPILARVVGKHCEAGDIVV 400 Query: 353 LNRKI-ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 + + A + GDLL + TGAY + YN P + V + ++ R T Sbjct: 401 RDTFVSADIQDGDLLAVPVTGAYCRSLASNYNYLGRPPLVAVRDGRARLLVRRETI 456 >gi|225377000|ref|ZP_03754221.1| hypothetical protein ROSEINA2194_02644 [Roseburia inulinivorans DSM 16841] gi|225211136|gb|EEG93490.1| hypothetical protein ROSEINA2194_02644 [Roseburia inulinivorans DSM 16841] Length = 426 Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats. Identities = 94/404 (23%), Positives = 144/404 (35%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N AF +A+KA N ++ L Sbjct: 12 LDEIVKKYPTPFHLYDEKGIRENAEAVKEAFAWNPGFREYFAVKATPNPFILNILKEYDC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A + + I+FS +E A + G + Sbjct: 72 GCDCSSLTELMLADSQGFDGQHIMFSSNDTPAEEFAFADELGAIINLDDFTHIDFLEQTI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G QI + Sbjct: 132 GHIPE---TISCRYNPGGVFKMSNGIMDNPGDAKYGFTHEQIIEGFKILKEKGAKYFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G +I+ I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNEYYPKLAHQLFELVVELRDKTGCDIKFINLSGGVGIPYRPDQIPNDIRVI 248 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + F + I E GRF++ G LVTK I K + + + A N Sbjct: 249 GEGVREAFEEILVPAGLGDISIYSEMGRFMLGPYGCLVTKAIHEKHTYKEYIGVDACAAN 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I + + D+ G +CE D A++R + GDLL I Sbjct: 309 LM-RPAIYGAYHHITVMGK-ENEPCDHKYDVTGSLCENCDKFAIDRMLPKIDMGDLLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI++ +IR T + Sbjct: 367 DTGAHGFSMGYNYNGRLRSAEILLKEDGSTQLIRRAETPDDYFA 410 >gi|325283598|ref|YP_004256139.1| Diaminopimelate decarboxylase [Deinococcus proteolyticus MRP] gi|324315407|gb|ADY26522.1| Diaminopimelate decarboxylase [Deinococcus proteolyticus MRP] Length = 414 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 97/405 (23%), Positives = 168/405 (41%), Gaps = 14/405 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLG 75 L +LAH + TPF+ Y + +N F AF YA+KA A+++ LA G Sbjct: 11 RLTELAHELPTPFHLYDERGMRENARAFMQAFAWAPGFRNYYAVKAAPTPALLQILAEEG 70 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G D S EL A + E I+F+ +E A + G + Sbjct: 71 FGADCSSLPELELAQRCGITGENIMFTSNDTPPEEFRRAAELGAVINLDDITHIAALEEA 130 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 +L + + P T I E K+G+ Q+ Y A + + Sbjct: 131 LGGTLPELLSFRYNPGP---ERTGNAIIGNPVEAKYGVTSEQLLDCYRTAQDKGVGRFAL 187 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 M +++D A L + G ++ +++GGG+GI Y + + S + Sbjct: 188 HTMVASNELDASFIIETARMLFTLAVRLKEELGIELEFVNLGGGIGIPYRPEQQAMSYQE 247 Query: 256 YASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + I + + ++ + E GR + G+LV++V + + K +V LD M Sbjct: 248 VSDGIRELYDSIIRPAGLDGLKLSFECGRVMTGPYGVLVSRVRHVTRK-YKDYVGLDACM 306 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 + MRP +Y +YH ++N D D+ G +CE D A++R++ + +PGD++ I Sbjct: 307 ANLMRPAMYGSYHH-ITVLNKGEDAPRQTVDVTGSLCENNDKFAIDRELPVMQPGDVVVI 365 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 GA+G YN +L E ++ + +IR T +L Sbjct: 366 HDAGAHGHSMGFNYNGKLRSAEYLLRADGRAEMIRRAETMDDLFA 410 >gi|168236070|ref|ZP_02661128.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194738024|ref|YP_002115965.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713526|gb|ACF92747.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290650|gb|EDY30004.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 420 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 122/433 (28%), Positives = 189/433 (43%), Gaps = 30/433 (6%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + +D VS GE+ RALAA + + T D ID A + + Sbjct: 54 KACSNIHILRLMRAQDVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++ + + + + + RVNP +K +TG + K GI + Sbjct: 113 SELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ K + I I + ++ + +Q+ G +++ I GGG Sbjct: 173 -----AALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISI 293 L I Y P + Y L + K+ +EPGRFLVA G+LVT+V S+ Sbjct: 228 LSIPYREGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSV 287 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 288 KQMGSRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDV 347 Query: 351 IALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 + PGD L + TGAYGA S YNSR L+PE++ + Q +IR Sbjct: 348 FTQQEGGMVETCALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRR 407 Query: 404 RMTFQELIELDSI 416 R T +EL+ L+ + Sbjct: 408 RQTIEELLALEML 420 >gi|217967747|ref|YP_002353253.1| diaminopimelate decarboxylase [Dictyoglomus turgidum DSM 6724] gi|217336846|gb|ACK42639.1| diaminopimelate decarboxylase [Dictyoglomus turgidum DSM 6724] Length = 423 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 120/415 (28%), Positives = 192/415 (46%), Gaps = 9/415 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM---VCYALKANS 63 + VS+ L TP Y + + N++ V +A+KA Sbjct: 12 KDEDYKIGGVSIPYLGEKYGTPLYILDKETLIFQAQKYINSWKKYYKNKYKVLFAIKALP 71 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 VI+ + G G + + GEL AL+A VP+E I F G KT+ EI+ A+ + Sbjct: 72 ILEVIRIFKNYGLGALVSTGGELYIALSANVPSEDIYFHGNAKTLKEIEYAIDQKVGAII 131 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 +++ E + + K + R+ P+I NTHK I TG+ + KFG+PI Q L Sbjct: 132 IDNFDEYEKIKYVLSKKDTKVKVLVRIIPNIEVNTHKSIRTGQTDTKFGLPIEQALVLIE 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 +T + G+ HIGSQI I ++ K ++L ++ ++L S ++ + +GGGLG+A Sbjct: 192 KINTEKNIIFKGIHSHIGSQIFDISAYVKLSEVLSEVYKELNSKNITVEEMSIGGGLGVA 251 Query: 244 YHSDHRPPSSSDYASLIHQYFGN---LQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 Y + PP D A + F K+I EPGR LV GI + ++ S K+ + Sbjct: 252 YTKEDNPPDIEDLAREVSNKFSETIGHNFKLICEPGRSLVGRAGITLYRIESRKELGIRK 311 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +V +D M+D +RP+LY A + I + + I G CE+GD + + P Sbjct: 312 YVSVDGGMSDNIRPSLYGAKYSALIITKGDREEI---FSIAGKHCESGDILIKDFSGLWP 368 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 PGD L TGAY YN+ ++V + II R +++L+ Sbjct: 369 NPGDYLITFTTGAYNFSMYTWYNATPRPAVVLVENGKDRIIVKRENYEDLLGGQI 423 >gi|294815814|ref|ZP_06774457.1| Diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294328413|gb|EFG10056.1| Diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 454 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 121/419 (28%), Positives = 196/419 (46%), Gaps = 15/419 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G + V L +LA TP Y + + A D V YA KA ++AV Sbjct: 38 GGDVAVGGVPLLELAERYGTPVYVLDEAEVRARARAWRRALP--DADVVYAAKAFLSRAV 95 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G GLD+ S GEL A + PAERIV G K+ ++ AL+ G+ ++SE Sbjct: 96 VDWMEQEGLGLDVCSAGELELAASRGFPAERIVLHGNAKSPQDLRTALRLGVGRIVIDSE 155 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ L + + + RV P I A H+KI TG + KFG+ + + A A Sbjct: 156 GEIARLAAQVQGPEPQ-QVMVRVLPGIEAGGHRKIRTGGEGQKFGLSLANGDAEEAVARV 214 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L PG+++ G+ H+GSQI E + +A + L L +LR + +D+GGG +AY Sbjct: 215 LGQPGLELVGLHCHLGSQIASPEPYARAVRRLVALLARLRDRHGITLPELDLGGGFAVAY 274 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 P+ + Y I ++ +EPGR ++A G+ + +V+++K+S Sbjct: 275 LPGDPAPAPAAYGRRIQDELIRSCAESDYPAPRLTVEPGRSIMAPAGVALYRVLAVKRSG 334 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + F +D M+D RP LY A + + + + + +VG CE GD +A + ++ Sbjct: 335 GRVFAAVDGGMSDNPRPALYGARYTVRRVGRVSAAPMRAT-TVVGRHCEAGDVLAESVEL 393 Query: 358 AL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 RPGD+L + GAY + YN P + V + ++ R TF++ D Sbjct: 394 PEDLRPGDVLAVPGAGAYHVSMASGYNMTGRPPVVAVAEGRSRVLLRRETFEDHRSRDI 452 >gi|254389440|ref|ZP_05004667.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|326444158|ref|ZP_08218892.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|197703154|gb|EDY48966.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 446 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 121/419 (28%), Positives = 196/419 (46%), Gaps = 15/419 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G + V L +LA TP Y + + A D V YA KA ++AV Sbjct: 30 GGDVAVGGVPLLELAERYGTPVYVLDEAEVRARARAWRRALP--DADVVYAAKAFLSRAV 87 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + + G GLD+ S GEL A + PAERIV G K+ ++ AL+ G+ ++SE Sbjct: 88 VDWMEQEGLGLDVCSAGELELAASRGFPAERIVLHGNAKSPQDLRTALRLGVGRIVIDSE 147 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ L + + + RV P I A H+KI TG + KFG+ + + A A Sbjct: 148 GEIARLAAQVQGPEPQ-QVMVRVLPGIEAGGHRKIRTGGEGQKFGLSLANGDAEEAVARV 206 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L PG+++ G+ H+GSQI E + +A + L L +LR + +D+GGG +AY Sbjct: 207 LGQPGLELVGLHCHLGSQIASPEPYARAVRRLVALLARLRDRHGITLPELDLGGGFAVAY 266 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 P+ + Y I ++ +EPGR ++A G+ + +V+++K+S Sbjct: 267 LPGDPAPAPAAYGRRIQDELIRSCAESDYPAPRLTVEPGRSIMAPAGVALYRVLAVKRSG 326 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + F +D M+D RP LY A + + + + + +VG CE GD +A + ++ Sbjct: 327 GRVFAAVDGGMSDNPRPALYGARYTVRRVGRVSAAPMRAT-TVVGRHCEAGDVLAESVEL 385 Query: 358 AL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 RPGD+L + GAY + YN P + V + ++ R TF++ D Sbjct: 386 PEDLRPGDVLAVPGAGAYHVSMASGYNMTGRPPVVAVAEGRSRVLLRRETFEDHRSRDI 444 >gi|325679598|ref|ZP_08159173.1| putative diaminopimelate decarboxylase [Ruminococcus albus 8] gi|324108628|gb|EGC02869.1| putative diaminopimelate decarboxylase [Ruminococcus albus 8] Length = 422 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 92/403 (22%), Positives = 145/403 (35%), Gaps = 15/403 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSG 77 +++ TPF+ Y I +N AF +A+KA N ++K L G G Sbjct: 12 QEIIKTYPTPFHIYDEKGIRENARNLYKAFSWNKGYKEYFAVKATPNPYILKILQEEGCG 71 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D S EL + + I+FS ++ A + G Y + + Sbjct: 72 VDCSSLTELMMSECCGFKGDDIMFSSNVTPAEDYLKARELGAYINLDDFTH----IEYLD 127 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G I R NP + KI + K+G QI + Sbjct: 128 QLCGIPETICCRYNPGGKFSIATKIMDNPGDAKYGFTHEQIIEGFKVLKEKGAKYFGLHA 187 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + A L + G + I++ GG+GIAY D Sbjct: 188 FLASNTVTNEYYPKLARILFELAVEIKEKTGVEFKFINLSGGVGIAYEPDKPQNDIFAIG 247 Query: 258 SLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 +H+ F I E GR+++A G L+T V K + + + A N Sbjct: 248 EGVHKAFDEILVPAGMGDVAIFTELGRYMLAPYGHLITTVKHFKHTHKEYAGVDACACNL 307 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 RP +Y AYH I + H D+ G +CE D A++R + GD+L I Sbjct: 308 M-RPAMYGAYHHITVLGKENAPCDH-KYDVTGGLCENNDKFAIDRMLPELEKGDILCIHD 365 Query: 371 TGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T + Sbjct: 366 TGAHGFSMGYNYNGKLRSAELLLKEDGDVQLIRRAETPADYFA 408 >gi|238758899|ref|ZP_04620071.1| Diaminopimelate decarboxylase [Yersinia aldovae ATCC 35236] gi|238702856|gb|EEP95401.1| Diaminopimelate decarboxylase [Yersinia aldovae ATCC 35236] Length = 421 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 108/417 (25%), Positives = 171/417 (41%), Gaps = 28/417 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + FD ++ +A KA SN +++ + G Sbjct: 16 NLMALPARFGCPVWAYDGDVIAERINQLRQ-FD----VIRFAQKACSNIHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RA+ A + + T D +D A S + ++ + + + Sbjct: 71 KVDSVSLGEIERAICAGFQP-GQEPAEIVFTADLLDEATLSRVTALDIPVNAGSIDMLDQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + P+ R+NP +K +TG + K GI + Sbjct: 130 LGQTKRGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYKDLPQAIEKVQQYG-----LT 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-------SDHR 249 + I I + ++ + QQ+ + G +I I GGGL I Y Sbjct: 185 LIGIHMHIGSGVDYQHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDADKIDTQH 244 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + A + +EPGRFLVA+ G+L+ +V ++K ++ +V++D N Sbjct: 245 YYGLWNDARERIAAHLGHPVSLEIEPGRFLVAESGVLIAQVRAVKNMGNRHYVLVDAGFN 304 Query: 310 DFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIAL 359 D MRP LY +YH I I I GP+CE+GD R++ Sbjct: 305 DLMRPALYGSYHHISLLPADGRDLNSDPLIDTVIAGPLCESGDVFTQEAGGALETRQLPN 364 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GD L TGAYGA S YNSR L+PE++ +IR R T +ELI L+ + Sbjct: 365 AHIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFERGVPRLIRRRQTIEELIALELV 421 >gi|76801473|ref|YP_326481.1| diaminopimelate decarboxylase [Natronomonas pharaonis DSM 2160] gi|76557338|emb|CAI48914.1| diaminopimelate decarboxylase [Natronomonas pharaonis DSM 2160] Length = 410 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 118/401 (29%), Positives = 196/401 (48%), Gaps = 9/401 (2%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 + LE+LA TP Y I NY FS AFD V YA KAN+ +AV++TL Sbjct: 12 DGDRLERLAEAHGTPLYVMDHDRIRANYARFSEAFDF--AHVMYAAKANTGRAVVRTLYD 69 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 G+ ++ + GEL RA+ A V E + ++ V ++D A+ + + + Sbjct: 70 AGADIECAAAGELYRAIEAGVAPEDLQYTAVNPPAGDLDYAVDLWEDTPELTITAGAEMT 129 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 R + G +A RVNP I H+K+ K+ KFG+P ++ ++ A + Sbjct: 130 LDRLEARGFDGRLALRVNPGIGTGHHEKV-ATGKDAKFGLPYEEVEAVAEAARERFDLVG 188 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + G ++ +A + + DL +++ + +D+GGG G+ Y D P Sbjct: 189 LHAHVGSGVLSGDLDDHERALQRVADLAERVGDL----EFVDLGGGFGVPYRPDEEPLDI 244 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 A ++ + +L + LEPGR+LVAD G LVT+V +IK++ + V +D + +R Sbjct: 245 EAAAEMVRRVTADLDATVALEPGRYLVADAGALVTRVNTIKETPETRVVGVDAGLTSMIR 304 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P ++D+YH I + GDR + + + GP+C + D +R I P DLL I GA Sbjct: 305 PAMFDSYHHIRNVTG--GDREPVESSVGGPLCTSADVFCTDRPIPRPEADDLLAIGNVGA 362 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 YG + ++S+ E+ + G + R R TF++L L+ Sbjct: 363 YGINLASQFHSQPRPGEVAIEGDNERVTRRRETFEDLTRLE 403 >gi|307132455|ref|YP_003884471.1| diaminopimelate decarboxylase, PLP-binding protein [Dickeya dadantii 3937] gi|306529984|gb|ADM99914.1| diaminopimelate decarboxylase, PLP-binding protein [Dickeya dadantii 3937] Length = 420 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 115/416 (27%), Positives = 178/416 (42%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL L P + Y I + FD + +A KA SN ++K + G Sbjct: 16 SLRALPERFGCPLWAYDAETIIERIGQLRQ-FD----TIRFAQKACSNLHILKLMRQQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RALAA + T D +D A + N+ + + + Sbjct: 71 KVDSVSLGEIERALAAGFEP-GTEAHEIVFTADVLDDATLQRVQELNIPVNAGSIDMLHQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ R+NP +K +TG + K GI + A + +K+ G+ Sbjct: 130 LGERSPGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQALE-ALSRYRLKLVGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + ++ + QQ+ + G +++ I GGGL I Y + Y Sbjct: 189 HMHIGSGV----DYGHLEQVCDAMVQQVLAVGQDLEAISAGGGLSIPYRHGGERIDTQHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L ++ + +EPGRFLVA+ G+LV +V ++K + FV++D +D Sbjct: 245 YGLWNRAREQIAAHLEHPVALEIEPGRFLVAESGVLVAQVRAVKDMGSRHFVLVDAGFSD 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALNR-------KIALP 360 MRP +Y +YH I + GP+CE+GD + Sbjct: 305 LMRPAMYGSYHHITLLPGDGRDLSQSALRDTVVAGPLCESGDVFTQQAGGGVETLPLPSA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L TGAYGA S YNSR LI E++ Q +IR R T EL+ L+ + Sbjct: 365 QVGDYLVFHDTGAYGASMSSNYNSRPLIAEVLFEQGQPRLIRRRQTLDELLALERV 420 >gi|291458446|ref|ZP_06597836.1| diaminopimelate decarboxylase [Oribacterium sp. oral taxon 078 str. F0262] gi|291418979|gb|EFE92698.1| diaminopimelate decarboxylase [Oribacterium sp. oral taxon 078 str. F0262] Length = 484 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 157/410 (38%), Gaps = 15/410 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGSG 77 E++ TPFY Y I +N AF +A+KA N +++ L G G Sbjct: 70 ERITESYPTPFYLYDEEGIRENARRLKQAFSWNPGFREYFAVKATPNPEILRILREEGCG 129 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D S EL + A + I+FS + E A + G + R Sbjct: 130 TDCSSLAELEMSEACGFRGQEIMFSSNDTPLSEYRFAEKLGAIINLDDF---SNIEELRE 186 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G + R NP I ++ KFG+ QI + Sbjct: 187 TLGGFPETLCLRYNPGGYFKIANTIMDNPQDAKFGMTEEQILEGFRILKAGGVKHFGIHA 246 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + A +L + G + I++ GG+GIAY + +P Sbjct: 247 FLASNTVSNEYYPTLARQLFTLAVRVKEDCGIRLSFINLSGGVGIAYRPEEKPNDILAIG 306 Query: 258 SLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 +H+ + + +I E GRF++A G L+T+VI K K + +D + Sbjct: 307 EGVHRVYDEILGKNGLSDVRIFTELGRFMLAPYGALITRVIHFK-ETYKHYAGVDACAAN 365 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP +Y AYH I + + D+VG +CE D A++R++ GDLL+I Sbjct: 366 LMRPAVYGAYHHITVLGKEKEEG-TESYDVVGSLCENNDKFAVDRRLPRLEKGDLLFIHD 424 Query: 371 TGAYGAVQSGTYNSRLLIPEIM-VNGSQFHIIRPRMTFQELIE-LDSIPA 418 GA+G YN +L E++ +IR T ++ LD P Sbjct: 425 AGAHGFAMGYNYNGKLWCAELLKKRDGSVKLIRRAETPRDYFATLDIDPD 474 >gi|325274551|ref|ZP_08140611.1| diaminopimelate decarboxylase [Pseudomonas sp. TJI-51] gi|324100310|gb|EGB98096.1| diaminopimelate decarboxylase [Pseudomonas sp. TJI-51] Length = 410 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 110/412 (26%), Positives = 175/412 (42%), Gaps = 27/412 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L + +P + Y T I + FD V +A KAN N V++ + G Sbjct: 8 LAEAVRQHGSPLWAYDTGTIAERVEQLK-VFD----TVRFAQKANPNLHVLRLMRGHGLV 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD VS GE+ RA AA + +GV T D +D + +E + + ++ Sbjct: 63 LDAVSLGEMERAFAAGASVQGD-PAGVVLTCDALDRPTLERVVAEKIEVNAGSIDMLRQL 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP +K + G L +K G+ Sbjct: 122 GERSPGHRVWVRINPGFGHGHS------RKTNTGGENSKHGIWHEQLDEALGVIKAHGLH 175 Query: 198 -MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + I + ++ R + + + G +I+ +GGGL Y S +P Y Sbjct: 176 LVGVHMHIGSGVDYQHLEQVARSMIELVGRLGVDIEAFSIGGGLSTPYRSSDKPVDLQRY 235 Query: 257 ASLIH------QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 A + ++ +EPGRFLVA+ G LV +V ++K+ TFV++D ND Sbjct: 236 AQTWAVARKEIEAMLGHPVRMEIEPGRFLVAECGYLVAEVRAVKQVGRNTFVMIDAGFND 295 Query: 311 FMRPTLYDAYHEIN--YIVNPAGDRLHIHADIVGPICETGDFIALN------RKIALPRP 362 MRP +Y AYH + +R + GP+CE+GD + + + + Sbjct: 296 LMRPAMYGAYHGMTLLDANGQPVERPRQPTVVAGPLCESGDVFTQDDQELTPQDLPQAQV 355 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GDLL I GAYGA S YNSR L+PE ++ +IR R T Q+L++L+ Sbjct: 356 GDLLVIHDAGAYGASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLDLE 407 >gi|315604826|ref|ZP_07879885.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313497|gb|EFU61555.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 180 str. F0310] Length = 466 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 115/432 (26%), Positives = 189/432 (43%), Gaps = 26/432 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--------MDTMVCYAL 59 G LH V L ++A TP + ++ +++A YA Sbjct: 32 GGVLHVGGVDLTRIASDYGTPTFVLDVASLRGRARVWASAMAEEFWEGYGMSGGDAFYAG 91 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA + V + +A G G+D S GEL AL A V RI G K+ EI LAL++GI Sbjct: 92 KAFLSADVARIVAEEGLGVDTASLGELTLALRAGVDPSRIGLHGNNKSDREIRLALEAGI 151 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQ 177 + ++S E++ + + A +G AP+ R+ I+A ++ I+T ++ KFG+ + Q Sbjct: 152 HRIFIDSMDEVRQVERIAADMGVSAPVMVRLKSGIHAGGNEYIATAHEDQKFGLSLASGQ 211 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDV 236 P + + G+ HIGSQI +F +A + + D +R G + ID+ Sbjct: 212 ALEAVRAIQRAPHLDLRGLHSHIGSQIFGTAAFVEAARKVIDFAALVRERLGLEVSAIDL 271 Query: 237 GGGLGIAYHSDHRPPSSSD--------YASLIHQYFGNLQCKIILEPGRFLVADVGILVT 288 GGG+GIAY + P+S + G ++ +EPGR + +++ Sbjct: 272 GGGVGIAYTAQDPVPTSPVEVARALAGVVRERCAHHGLPIPRVTVEPGRSIAGPSMVMLY 331 Query: 289 KVISIKKS-----ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 +V +K + +V +D M+D +RP LY A + + N G +VG Sbjct: 332 RVGVVKDVSLEGGGVRRYVAIDGGMSDNIRPVLYGAAY-TATLANRDGSTALARCRVVGK 390 Query: 344 ICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIR 402 CE+GD + + + GDLL + GAYG + YN + V + H Sbjct: 391 HCESGDIVVRDVDLPADIAGGDLLAVPAVGAYGYSMASNYNMATKPGVLAVEDGEAHWFL 450 Query: 403 PRMTFQELIELD 414 + L+ LD Sbjct: 451 RPQSVDHLLALD 462 >gi|260437146|ref|ZP_05790962.1| protein TabA [Butyrivibrio crossotus DSM 2876] gi|292810458|gb|EFF69663.1| protein TabA [Butyrivibrio crossotus DSM 2876] Length = 422 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 94/404 (23%), Positives = 152/404 (37%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 +E++ TPF+ Y I +N AF +A+KA N +I L G Sbjct: 12 VEEIVKKYPTPFHIYDEKGIRENARKVKEAFAWNPGFREYFAVKATPNPFLINILREYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S+ EL + A E I+FS +E A + G + ++ Sbjct: 72 GTDCSSKTELMLSKAIGCKGEEIMFSSNDTPPEEFVYANKLGAIINLDDFTH----IDVI 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 +G I+ R NP + I + K+G Q+ + Sbjct: 128 DKLIGIPETISCRFNPGGLFSIANSIMDNPGDAKYGFTKEQLIEGFKILKAKGAKNFGIH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G +I+ I++ GG+GI Y D P Sbjct: 188 SFLASNTVTNDYYPSLAKILFELAVEIKNKTGCHIKFINLSGGVGIPYKPDGTPNDILAI 247 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + I E GRF++ G LVT+V K K ++ D Sbjct: 248 GEGVHKVYDEVLVPNGMGDVAIYTEMGRFMMGPYGGLVTRV-GNMKHTYKEYIGTDACAV 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + + D+ G +CE D A++R + GD L+I Sbjct: 307 NLMRPAMYGAYHHITVLGK-ENEPCDHKYDVTGSLCENNDKFAIDRMLPKIEIGDYLFIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ + +IR T ++ Sbjct: 366 DTGAHGFSMGYNYNGKLRSAELLLKENGEVQMIRRAETPEDYFR 409 >gi|198275986|ref|ZP_03208517.1| hypothetical protein BACPLE_02169 [Bacteroides plebeius DSM 17135] gi|198271615|gb|EDY95885.1| hypothetical protein BACPLE_02169 [Bacteroides plebeius DSM 17135] Length = 386 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 139/370 (37%), Positives = 197/370 (53%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSN-AFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y T + + A V YA+KAN+N V+ + G G D V Sbjct: 11 RKLETPFYYYDTNLLRETLNKIKEEAGKYNKFCVHYAVKANANPKVLGIIRESGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE++ A+ A PA +IV++GVGKT EI+L L I+CFNVES EL+ +N+ A + Sbjct: 71 SGGEIKAAIKAGFPASKIVYAGVGKTDKEINLGLDYDIFCFNVESIPELEVINELAAAKN 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI I + + A + VK G+ HIG Sbjct: 131 KIARVAFRINPDVGAHTHANITTGLAENKFGISIQDMDRVIDLALEMKNVKFVGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---DYAS 258 SQI + F + +L ++L + ++HI+VGGGLGI Y +R P +A+ Sbjct: 191 SQILDMGDFVALCNRVNELQEKLFARQIIVEHINVGGGLGIDYAHPNRQPIPDFAEYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L+TKV +K+ +K F I+D M D +RP LY Sbjct: 251 YHKHLRLRPQQTLHFELGRAVVGQCGSLITKVTYVKQGTNKQFAIVDGGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH I N + D+VGPICE+ D + GDL+ + GAYG + Sbjct: 311 AYH---KIENLTSEEPVETYDVVGPICESSDVFGKAIDLNKVHRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRPLP 377 >gi|206900405|ref|YP_002251079.1| diaminopimelate decarboxylase [Dictyoglomus thermophilum H-6-12] gi|206739508|gb|ACI18566.1| diaminopimelate decarboxylase [Dictyoglomus thermophilum H-6-12] Length = 425 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 117/409 (28%), Positives = 189/409 (46%), Gaps = 10/409 (2%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG---MDTMVCYALKANSNQAVIK 69 VS+ L TP Y + + T+ +++ + V +A+KA VI+ Sbjct: 19 IGGVSIPYLGEKHNTPLYILDKSTLSFQANTYMDSWKKYYKNNYKVLFAIKALPILEVIR 78 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 + G G + + GEL AL+A V E I F G KT+ EI+ A+ I +++ E Sbjct: 79 IFKNHGLGALVSTGGELYIALSAGVSPENIYFHGNAKTLREIEYAIDQNIGALIIDNFDE 138 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + K + R+ P+I NTH+ I TG+ + KFG+PI Q L Sbjct: 139 YEKIKYLLSKKDAKINVLVRIIPNIEVNTHRSIRTGQTDTKFGLPIDQALILIQKIKKEK 198 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + G+ HIGSQI I ++ K ++L ++ +L+S ++ + +GGGLG+AY + Sbjct: 199 NIIFKGIHSHIGSQIFDISAYVKLSEVLSEVYNELKSQNIAVEEMSIGGGLGVAYTEEDN 258 Query: 250 PPSSSDYASLIHQYFGN---LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV-ILD 305 PP+ D A + F +I EPGR LV GI + ++ S K+ + +D Sbjct: 259 PPNIEDLAREVSNKFKETIGHNFTLICEPGRSLVGRAGITLYRIESRKELPNIRKYVSVD 318 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 M+D +RP+LY A + I + I G CE+GD + + K P PGD Sbjct: 319 GGMSDNIRPSLYGAKYSALVITK---NEKETIFSIAGKHCESGDILIKDFKGPWPNPGDY 375 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 L TGAY YN+ L ++V + +I R +++L+ Sbjct: 376 LITFTTGAYNFSMYTWYNATLRPAVVLVENGKEKLIVKRENYEDLLRGQ 424 >gi|222081791|ref|YP_002541156.1| diaminopimelate decarboxylase [Agrobacterium radiobacter K84] gi|221726470|gb|ACM29559.1| diaminopimelate decarboxylase protein [Agrobacterium radiobacter K84] Length = 414 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 104/406 (25%), Positives = 165/406 (40%), Gaps = 27/406 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA TP + Y AI + +AFD ++ +A KA SN +++ + G Sbjct: 9 LTTLAAEYGTPLWVYDAEAIRRRIKQL-SAFD----VIRFAQKACSNIHILREMRKAGVF 63 Query: 78 LDIVSEGELRRALAAPVP-AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RA+ A + + T D D A+ + +E + + Sbjct: 64 VDAVSLGEIERAVRAGYAVGSTSDAAEIVFTADVFDRAILDRVVADRIEVNIGSIDMLHQ 123 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + RVNP K +TG + K GI Q+H + Sbjct: 124 LGERSPGHRVWLRVNPGFGHGHSNKTNTGGENSKHGIWFEQLHEAVSAVRAHS-----LT 178 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + I + ++ + R G +I+ I GGGL + Y + Y Sbjct: 179 LVGLHMHIGSGVDYGHLQRVCGAMVDFCRDLGTDIEAISAGGGLSVPYKEGEEEIDPTHY 238 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 SL + ++ +EPGRFL AD G+L+ +V ++K F ++D +D Sbjct: 239 FSLWDEARRQVEAHVQHPVRLEIEPGRFLTADSGVLLAEVRAVKTMGQNRFTLVDAGFSD 298 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIA-------LNRKIALP 360 RP +Y +YH I + + + GP+CE+GD R + Sbjct: 299 LARPAMYGSYHHISVIPGPAPHDRSAVTLPTVVAGPLCESGDVFTQTEFGTVEKRDLPET 358 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 GD L TGAYGA S YNSRL PE++++ + +IR R T Sbjct: 359 HVGDFLVFHGTGAYGATMSSNYNSRLYAPEVLLDEGKHRLIRRRQT 404 >gi|238923829|ref|YP_002937345.1| diaminopimelate decarboxylase [Eubacterium rectale ATCC 33656] gi|238875504|gb|ACR75211.1| diaminopimelate decarboxylase [Eubacterium rectale ATCC 33656] gi|291524569|emb|CBK90156.1| Diaminopimelate decarboxylase [Eubacterium rectale DSM 17629] gi|291527996|emb|CBK93582.1| Diaminopimelate decarboxylase [Eubacterium rectale M104/1] Length = 422 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 96/404 (23%), Positives = 152/404 (37%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 +E++ TPF+ Y I N +AF +A+KA N ++K L Sbjct: 12 VEEIVKQFPTPFHLYDEAGIRANAQAVKDAFAWNPGFREYFAVKATPNPYLLKILKDYDM 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A + E I+FS +E A + G + Sbjct: 72 GCDCSSYTELMLAKSCGFDGEHIMFSSNDTPAEEFAYADKLGAIINLDDFTHIDFLEETI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ Q+ + + Sbjct: 132 GHIPE---TISCRYNPGGVFTLSNGIMDNPGDSKYGMTKEQLFEAFKILKSKGAKYFGVH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G +I+ +++ GG+G+AY D P S Sbjct: 189 AFLASNTVTNEYYPQLAKELFELVVELKNETGCDIRFVNLSGGVGVAYKPDQTPNDISVI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + +H+ + I E GRF++A G LVTK I K + + A N Sbjct: 249 GAGVHKVYDEVLVPAGMGDVAIYTEMGRFMMAPYGCLVTKAIHEKHIYKEYIGVDACAAN 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y +YH I + H D+VG +CE D A++R++ GD L I Sbjct: 309 LM-RPAIYGSYHHITVLGKEDAPCDH-TYDVVGSLCENCDKFAIDRQLPKIDMGDYLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI++ + +IR T + Sbjct: 367 DTGAHGFSMGYNYNGRLRSAEILLESNGEAKLIRRAETPADYFA 410 >gi|238796567|ref|ZP_04640074.1| Diaminopimelate decarboxylase [Yersinia mollaretii ATCC 43969] gi|238719545|gb|EEQ11354.1| Diaminopimelate decarboxylase [Yersinia mollaretii ATCC 43969] Length = 420 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 108/416 (25%), Positives = 172/416 (41%), Gaps = 27/416 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I + FD ++ +A KA SN +++ + G Sbjct: 16 NLIALPERFGCPVWAYDGDIIAQRINQLR-HFD----VIRFAQKACSNIHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + + T D +D A + + + + + Sbjct: 71 KVDSVSLGEIERALVAGFQP-GQEPAEIVFTADLLDQATLLRVTELRIPVNAGSIDMLDQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI + + Sbjct: 130 LGQHAPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYQDLPQAIEKIAQYG-----LT 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I I + ++ + +Q+ + G +I I GGGL I Y + Y Sbjct: 185 LVGIHMHIGSGVDYQHLEQVCDAMVEQVITLGQDISAISAGGGLSIPYQVGDDEIDTEHY 244 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + +EPGRFLVA+ G+L+ +V ++K+ + +V++D ND Sbjct: 245 YGLWNSARERIAAHLGHPVSLEIEPGRFLVAESGVLIAQVRAVKEMGSRHYVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH I I + GP+CE+GD R + Sbjct: 305 LMRPAMYGSYHHISLLPADGRSLTAEPLIETVVGGPLCESGDVFTQEAGGGLETRALPAA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 R GD L TGAYGA S YNSR L+PE++ Q +IR + T +ELI L+ + Sbjct: 365 RIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRKQTIEELIALELV 420 >gi|313896962|ref|ZP_07830509.1| putative diaminopimelate decarboxylase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974409|gb|EFR39877.1| putative diaminopimelate decarboxylase [Selenomonas sp. oral taxon 137 str. F0430] Length = 425 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 95/402 (23%), Positives = 157/402 (39%), Gaps = 16/402 (3%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGSGL 78 +L TPF+ Y I N AF +A+KA N +++ L G+G Sbjct: 15 ELIKQFPTPFHIYDEGKIRANCRRLREAFAWAPGFREHFAVKALPNPRIVQLLHEEGAGT 74 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S EL + AA V E I+ + DE +++ G + T Sbjct: 75 DCSSIAELLISEAAGVTGEEIMLTSNDTPFDEFQKSIELGAVINLDD-----ITHLDYMA 129 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + I E K+G+ Q+ YA A + + M Sbjct: 130 KHAGLPEVLSFRYNPGDTIEGNDIIGKPVEAKYGLTHAQMLEGYARAREMGVRRFGLHTM 189 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 I +++ A + + G +++ +++GGG GI Y + P + + Sbjct: 190 VISAELRTEAFLLTARIMFELAVELKEKLGIHVEFVNLGGGFGIPYRPEEDPVDFAAVGA 249 Query: 259 LIHQYFGNLQCKIIL-------EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 I + + + L E GR + D G LV+ V+ K + K +V LD M + Sbjct: 250 GIERLYHEIMRPAELGDVAIRTESGRAVTGDAGWLVSTVLHKKNT-YKKYVGLDSCMANL 308 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 MRP LY AYH I + H+ D+ G +CE D A++R + GD++ I T Sbjct: 309 MRPALYGAYHHITVLGKEHAPADHV-YDVTGSLCENNDKFAVDRALPQIDIGDIVVIHDT 367 Query: 372 GAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+G+ YN +L E+++ +IR T + Sbjct: 368 GAHGSAMGFNYNGKLHCAELLLHEDGTVELIRRAQTLDDYFA 409 >gi|116671170|ref|YP_832103.1| diaminopimelate decarboxylase [Arthrobacter sp. FB24] gi|116611279|gb|ABK04003.1| diaminopimelate decarboxylase [Arthrobacter sp. FB24] Length = 500 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 118/455 (25%), Positives = 189/455 (41%), Gaps = 50/455 (10%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------DTMVCYALKAN 62 G L + + + +L H TP + S FS+AF+ V YA K+ Sbjct: 44 GELAIDGIPVSELQHEFGTPLFVMSENDFRARARAFSDAFNDAFADICGGVDVYYAGKSF 103 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 AV++ + G LD S GEL A A +P + G K+ EI AL + Sbjct: 104 LCTAVVRWVEEEGLRLDTASGGELAVAARAGIPGADVALHGNNKSDAEIHRALDMKLGRI 163 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 V+S +EL+ + A + G+ A + R+ P ++A+TH+ I+T ++ KFG+ + + + Sbjct: 164 VVDSLAELERIAAIASARGETARVMLRLTPGVHAHTHEFIATAHEDQKFGLSMAEDSTDQ 223 Query: 183 AYAST----------LPGVKISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNI 231 A S G+++ G+ HIGSQI + + F A KLLR L + Sbjct: 224 AGLSAAEEAVAAATGFAGIELLGLHCHIGSQIFEPDGFALAAVKLLRFLAAMQEKYSIVL 283 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVG 284 +D+GGG GIAY P ++ A + + +I +EPGR +V Sbjct: 284 PELDLGGGYGIAYTPVDTPRPPAEIAQAMAAVVRSTCEELGITAPRISIEPGRAIVGTST 343 Query: 285 ILVTKV------------------------ISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + +V + + + +V +D M+D RP LYDA Sbjct: 344 FTLYEVGTLKTVRVDAPAAADGAAADQAGNTAKNVTYPRRYVSVDGGMSDNARPVLYDAD 403 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQS 379 + +G + +VG CE+GD + + + GDLL + TGAY S Sbjct: 404 YSAIVASRTSGAAPQ-LSRVVGKHCESGDIVVRDVYLPEDVAAGDLLAVPGTGAYCWALS 462 Query: 380 GTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 YN + V +I T Q+L+ D Sbjct: 463 SNYNYLARPGVVAVRDGSARLIVRGETEQDLLNRD 497 >gi|160878460|ref|YP_001557428.1| Orn/DAP/Arg decarboxylase 2 [Clostridium phytofermentans ISDg] gi|160427126|gb|ABX40689.1| Orn/DAP/Arg decarboxylase 2 [Clostridium phytofermentans ISDg] Length = 419 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 88/404 (21%), Positives = 147/404 (36%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 + ++ + TPFY Y I +N AF +A+KA N +++ L G Sbjct: 11 VNEIVNTHSTPFYIYDEKGIRENARKLKEAFSWNKGFKEYFAVKATPNPFILQILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D SE EL + A + I+FS E A + G + + Sbjct: 71 GSDCSSETELMISEAVGITGSEIMFSSNNTPEGEFTKAKELGAIINLDDYTHIDFLKEEC 130 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + +++ I + K+G Q+ Y L Sbjct: 131 GIPETICCRYNPGGVYEVSNG----IMDNPGDAKYGFTKQQLIDGYKKLMELGAKNFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A L + NI I++ GG+GI Y + + Sbjct: 187 SFLVSNTVTNDYYPALARTLFELAVELKNETNANITFINLSGGIGIPYLPEEKGNDIMVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + I E GR+++A LVTK I K K ++ +D Sbjct: 247 GEGVRKAYEEILVPNGLGDVAIFTELGRYMLAPYAHLVTKAIHEKHI-YKEYLGVDACAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + + D+VG +CE D A++R + GD L I Sbjct: 306 NLMRPAMYGAYHHITVLGKEETPLDTM-YDVVGSLCENNDKFAIDRMLPKVDMGDYLVIH 364 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T ++ Sbjct: 365 DTGAHGFAMGYNYNGKLKSAELLLKEDDSVQLIRRAETPEDYFA 408 >gi|82545140|ref|YP_409087.1| diaminopimelate decarboxylase [Shigella boydii Sb227] gi|187733218|ref|YP_001881421.1| diaminopimelate decarboxylase [Shigella boydii CDC 3083-94] gi|81246551|gb|ABB67259.1| diaminopimelate decarboxylase [Shigella boydii Sb227] gi|187430210|gb|ACD09484.1| diaminopimelate decarboxylase [Shigella boydii CDC 3083-94] gi|320185573|gb|EFW60338.1| Diaminopimelate decarboxylase [Shigella flexneri CDC 796-83] gi|332092188|gb|EGI97266.1| diaminopimelate decarboxylase [Shigella boydii 3594-74] Length = 420 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL + Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRSLLPEVLFDNGQARLIRRRQTI 411 >gi|320176405|gb|EFW51459.1| Diaminopimelate decarboxylase [Shigella dysenteriae CDC 74-1112] Length = 420 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGPVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL + Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRSLLPEVLFDNGQARLIRRRQTI 411 >gi|167765998|ref|ZP_02438051.1| hypothetical protein CLOSS21_00489 [Clostridium sp. SS2/1] gi|167712355|gb|EDS22934.1| hypothetical protein CLOSS21_00489 [Clostridium sp. SS2/1] gi|291558790|emb|CBL37590.1| Diaminopimelate decarboxylase [butyrate-producing bacterium SSC/2] Length = 416 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 101/404 (25%), Positives = 155/404 (38%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I + AF +A+KA N ++K L G Sbjct: 12 LDEIVKKYPTPFHLYDEKGIRETARGLYKAFSWNKGFKEYFAVKATPNPTILKILKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+FS +E LA Q G + + Sbjct: 72 GTDCSSLTELMMSDRCGFDGSEIMFSSNDTPAEEFILAKQLGATINLDDITH----IEFL 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G I+ R NP I + K+G+ QI + L + Sbjct: 128 KECAGIPEKISCRYNPGGVFALGTDIMDNPGDAKYGMTTEQIFEAFKQLKELGVKEFGIH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G +I I++ GG+GI Y D + Sbjct: 188 SFLASNTVTNEYYPTLAKQLFELAVKLKEEVGVHIGFINLSGGVGIPYLPDQEGNDIAVI 247 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + KI E GR+++A G LVTK I K + K ++ +D Sbjct: 248 GEGVHKVYDEVLVPAGMGDVKIFTELGRYMLAPNGHLVTKAIHEKHT-HKEYIGVDACAV 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H+ DI G +CE D A++RK+ GDLL I Sbjct: 307 NLMRPAMYGAYHHITVMGKENEPADHV-YDITGSLCENNDKFAIDRKLPKIDMGDLLVIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L EI++ +IR T ++ Sbjct: 366 DTGAHGFAMGYNYNGKLKSAEILLKEDGTTEMIRRAETPEDYFA 409 >gi|41407084|ref|NP_959920.1| LysA_1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395435|gb|AAS03303.1| LysA_1 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 444 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 100/420 (23%), Positives = 166/420 (39%), Gaps = 16/420 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 EG L V L +A TP Y V YA K+ + A Sbjct: 29 EEGRLCVGGVPLGDVADEFGTPAYVVDEADFRC--RARRYRRALRGVEVVYAGKSLLSTA 86 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + G+D+ S GEL ALA V RIV G K+ +E+ A++ G+ ++S Sbjct: 87 VARWAREERLGVDVCSAGELATALAGGVDPARIVMHGNAKSPEELREAVRVGVGRIVLDS 146 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAY 184 E+ L ++ P+ RV PDI+ + H+ ++TG + KFG + Sbjct: 147 TIEIAYLA---GLARRRQPVLIRVTPDIDIHGHRAVTTGVSDQKFGFTLAGDHAADAVRR 203 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 P + + G+ H+GSQ+ + +A + + +R+ + +++GGG I Sbjct: 204 VLAHPILDLVGLHCHLGSQVSDPALYGEAIRRMIAAMADIRARHGVILTELNIGGGHAIP 263 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y S + A +I + +I++EPGR + G+ + +V S+K Sbjct: 264 YASGDPELNLDQLADVIEDALDEACAAERFPRPQIVVEPGRAISGRAGVTLYRVCSVKTQ 323 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + + N L + G CE+GD IA + + Sbjct: 324 GGGRTFVAVDGGMSDNPRVSLYGARYAVALANRHPLGLKQRVTVAGRHCESGDEIARDVE 383 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + RPGDLL + TGAY + YN P + V+ + + R T +L+ D Sbjct: 384 LPADLRPGDLLAVACTGAYHHSMASNYNMVGRPPLVAVSEGRARELVRRETVADLLARDR 443 >gi|167032598|ref|YP_001667829.1| diaminopimelate decarboxylase [Pseudomonas putida GB-1] gi|166859086|gb|ABY97493.1| diaminopimelate decarboxylase [Pseudomonas putida GB-1] Length = 410 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 112/411 (27%), Positives = 178/411 (43%), Gaps = 25/411 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L + +P + Y T I + FD V +A KAN N V++ + G Sbjct: 8 LAEAVRQHGSPLWAYDTGTIAERVEQLK-VFD----TVRFAQKANPNLHVLRLMRAHGLV 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD VS GE+ RA AA +GV T D +D + +E + + ++ Sbjct: 63 LDAVSLGEMERAFAAGASVGGD-PAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLRQL 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP +K +TG + K GI ++ A Sbjct: 122 GERSPGHRVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHG-----LHL 176 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + I + ++ R + + + G +I+ +GGGL Y +P YA Sbjct: 177 VGVHMHIGSGVDYQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRKTDKPVDLQRYA 236 Query: 258 SLIH------QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + ++ +EPGRFLVA+ G LV +V ++K+ TFV++D ND Sbjct: 237 QTWAVARKEIEAMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVMIDAGFNDL 296 Query: 312 MRPTLYDAYHEIN--YIVNPAGDRLHIHADIVGPICETGDFIALN------RKIALPRPG 363 MRP +Y AYH + DR + GP+CE+GD + +++ + G Sbjct: 297 MRPAMYGAYHGMTLLDANGQPVDRPRQPTVVAGPLCESGDVFTQDDQELTPQELPQAQVG 356 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 DLL I GAYGA S +YNSR L+PE ++ +IR R T Q+L++L+ Sbjct: 357 DLLVIHDAGAYGASMSSSYNSRPLLPEFLIEDGALRMIRRRQTVQDLLDLE 407 >gi|167758309|ref|ZP_02430436.1| hypothetical protein CLOSCI_00648 [Clostridium scindens ATCC 35704] gi|167664206|gb|EDS08336.1| hypothetical protein CLOSCI_00648 [Clostridium scindens ATCC 35704] Length = 424 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 148/404 (36%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y + +N AF +A+KA N +I L G Sbjct: 12 LEEIVKEYPTPFHLYDEKGLRRNMKALKEAFAWNKGYKEYFAVKATPNPFLINILKEYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A V E I+FS +E A + G + Sbjct: 72 GCDCSSYTELMLSEAIGVTGEDIMFSSNDTPAEEFAYAEKLGAIINLDDITHIDFLEQTI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ Q+ + + Sbjct: 132 GHIPE---TISCRYNPGGLFKISNDIMDNPGDSKYGMTTEQLFESFKILKEKGAKEFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G +I+ I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNDYYPMLAKILFELAVKLQMETGVHIKFINLSGGIGIPYTPDQEPNDIRMI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++ G LVTK I K + K +V +D Sbjct: 249 GDGVRRVYEEVLTPAGMGDVAIYTELGRFMMGPYGCLVTKAIHEKHT-HKEYVGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H DI G +CE D A++R + GDLL I Sbjct: 308 NLMRPAMYGAYHHITVMGKEDIPCDH-KYDIAGSLCENNDKFAIDRMLPKIDKGDLLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T + Sbjct: 367 DTGAHGFSMGYNYNGKLKSAELLLKEDGTVQLIRRAETPADYFA 410 >gi|222479105|ref|YP_002565342.1| diaminopimelate decarboxylase [Halorubrum lacusprofundi ATCC 49239] gi|222452007|gb|ACM56272.1| diaminopimelate decarboxylase [Halorubrum lacusprofundi ATCC 49239] Length = 453 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 120/423 (28%), Positives = 183/423 (43%), Gaps = 25/423 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L LA TP Y + +N AF D V YA+KA++ +AV++ + G Sbjct: 26 RLAGLAVEHGTPLYVQDLDRVRENSERLREAFP--DADVRYAVKAHTGRAVLEAVREAGL 83 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 + S GE+ RALAA +R+ ++ V ++D + ++ R Sbjct: 84 DAECASAGEVDRALAAGFGGDRLHYTAVNPPARDLDYVVGVAEAEPDLTITVGAVDTLDR 143 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G + RVNP + A H+K+ TG KFGIP + A + G+ Sbjct: 144 LAERGYDGRVCVRVNPGVGAGHHEKVRTGGAA-KFGIPYDRAAEATRDA--AERFDVVGI 200 Query: 197 DMHIGSQIDQIESFHKAFKLLRDL--------TQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 H GS ID + + R + +I+++DVGGG G+ Y D Sbjct: 201 HAHAGSGIDPDQLDSHREMVTRMGGLARDLTDPDEGGVAPVDIEYVDVGGGFGVPYKEDA 260 Query: 249 RPPSSSDYA--SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 A + + +EPGR++VAD G+L+T+V ++K + D+ V +D Sbjct: 261 PALDLPAVAEATREAVAPLPAGVDLAIEPGRYVVADAGVLLTRVNTVKPTPDERVVGVDA 320 Query: 307 AMNDFMRPTLYDAYHEINY----------IVNPAGDRLHIHADIVGPICETGDFIALNRK 356 M D +RP +YDAYH I DR + GPICETGD + +R Sbjct: 321 GMTDLLRPAMYDAYHPIRNLGGGRESDGSDAPAIDDRSATPVTVAGPICETGDTLCTDRA 380 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +A P GDLL + GAYG + YNSR PE+ ++ I+R R T +L ++ Sbjct: 381 LADPVRGDLLAVGIAGAYGYEMATQYNSRPRPPEVALDDGTAAIVRRRETLDDLTTVERD 440 Query: 417 PAW 419 Sbjct: 441 ANR 443 >gi|322831543|ref|YP_004211570.1| diaminopimelate decarboxylase [Rahnella sp. Y9602] gi|321166744|gb|ADW72443.1| diaminopimelate decarboxylase [Rahnella sp. Y9602] Length = 419 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 112/408 (27%), Positives = 178/408 (43%), Gaps = 27/408 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 P + Y I++ FD ++ +A KA SN +++ + G +D VS Sbjct: 22 QQFGCPVWAYDAEIIKQRIAQLRQ-FD----VIRFAQKACSNIHILRLMREQGVKVDSVS 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GE+ RAL A S + T D +D + ++ + + + Sbjct: 77 LGEIERALVAGFIPGGTD-SEIVFTADVLDQPTLERVTALDIPVNAGSIDMLSQIGQHKA 135 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 P+ RVNP +K +TG + K GI + + K+ G+ MHIGS Sbjct: 136 GHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYADLPQALTEIARYGL-KLVGIHMHIGS 194 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + ++ + +Q+ GH+I+ I GGGL I YH + + Y L ++ Sbjct: 195 GV----DYGHLEQVCDAMVRQVIETGHDIEAISAGGGLSIPYHFEEESIDTGHYFGLWNR 250 Query: 263 YFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + K+ +EPGRFLVA+ G+LV ++ ++K + FV+ D ND MRP + Sbjct: 251 AREQIAAHLGHEIKLEIEPGRFLVAESGVLVAQIRAVKNMGSRHFVLCDAGFNDLMRPAM 310 Query: 317 YDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGDLL 366 Y +YH I + + I GP+CE+GD + GD L Sbjct: 311 YGSYHHISLLPADGRDVSGQPLTDSVIAGPLCESGDVFTQQAGGGVETFPLPPVHIGDYL 370 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 TGAYGA S YN+R L+PE++ +IR R T +ELI L+ Sbjct: 371 VFHDTGAYGASMSSNYNTRPLLPEVLFENGVPRLIRRRQTVEELIALE 418 >gi|322387089|ref|ZP_08060700.1| diaminopimelate decarboxylase [Streptococcus infantis ATCC 700779] gi|321142076|gb|EFX37570.1| diaminopimelate decarboxylase [Streptococcus infantis ATCC 700779] Length = 417 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 102/410 (24%), Positives = 163/410 (39%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 + LEK+ TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FIKREDLEKIVEEFPTPFHLYDEKGIREKARAVNEAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + ++FS E A + G E Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLGFTGAEMMFSSNNTPDQEYAYARELGATINLDA--FED 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + A + + + T I E KFG+ Q+ +A Sbjct: 123 IDHLECAAGIPEIISCRYNPGGVFELGTD--IMDNPGEAKFGMTKEQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A GILVTKV KK+ +T++ Sbjct: 241 NDIALIGEGVRRVYEEVLTPAGLGQVKIFTELGRFMLAPHGILVTKVTHKKKT-YRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I ++NP G D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHITNMMNPGGQ--TEVVDVVGSLCENNDKFAVNRELPQTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ +IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEDGGARLIRRAERPEDYFA 407 >gi|256833011|ref|YP_003161738.1| diaminopimelate decarboxylase [Jonesia denitrificans DSM 20603] gi|256686542|gb|ACV09435.1| diaminopimelate decarboxylase [Jonesia denitrificans DSM 20603] Length = 459 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 107/436 (24%), Positives = 179/436 (41%), Gaps = 27/436 (6%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYA 58 + +G VS +LA TP + + + F +AF G+D V YA Sbjct: 23 RLHDGEFVLAGVSATQLADEHGTPAFFLDESDFRERAQLFRDAFRAAFSPLGVDVDVYYA 82 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + AV + G +D S GE+ AL A +P + + G K+ +E A+ Sbjct: 83 GKAFLSIAVARWAHEEGLRIDTASMGEMAVALRAGIPGDHMGLHGNNKSDEERRRAITHR 142 Query: 119 IYCFNVESESELKTLNQR----AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 + ++S E+ + + + P+ RV I+A H I+T +++ KFG+ Sbjct: 143 VGRIVIDSPGEIDDIVRVARALGRTAADPVPVMVRVTTGIHAGGHDFIATAREDQKFGLS 202 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK---AFKLLRDLTQQLRSNGHNI 231 + +L + L ++ + H + A K+L + G+ + Sbjct: 203 LAGGQALATLTAVLDHPELHLLGAHAHIGSQIQDPTAFEVNARKMLTLRADLEHATGYLM 262 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVG 284 +D+GGG GIAY + P + A + +I +EPGR ++ Sbjct: 263 PELDLGGGYGIAYTPEETPIDVPNLAQRLATTLSEVAAELGTTIPRISIEPGRSIIGPAM 322 Query: 285 ILVTKVISIKKSADKT-----FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 + +V +K +V +D M+D +RP LY A + + N G A Sbjct: 323 VTCYRVGVVKPVVTDEGVTRLYVSVDGGMSDNIRPALYGAQY-TARLANRTGSEQGALAR 381 Query: 340 IVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQF 398 +VG CE+GD I + + PGDLL + TGAY + YN+ L P I V Sbjct: 382 VVGKHCESGDIIIPDVVLPADIGPGDLLVVAATGAYNRSMASNYNNLLKPPVIAVREGHT 441 Query: 399 HIIRPRMTFQELIELD 414 ++ R T +L+ D Sbjct: 442 TVLVRRETEDDLLATD 457 >gi|146312925|ref|YP_001177999.1| diaminopimelate decarboxylase [Enterobacter sp. 638] gi|145319801|gb|ABP61948.1| diaminopimelate decarboxylase [Enterobacter sp. 638] Length = 420 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 112/414 (27%), Positives = 183/414 (44%), Gaps = 27/414 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L +L P + Y + + FD +V +A KA SN +++ + G Sbjct: 16 NLLRLPAEFGCPVWVYDAQIVREKIAALHQ-FD----VVRFAQKACSNIHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RALAA + + V ID A + ++ + + + ++ Sbjct: 71 KVDSVSLGEIERALAAGYDPQADSDAIVFTADL-IDSATLARVHELQIPVNAGSVDMLEQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + RVNP +K +TG + K GI + + A + + Sbjct: 130 LGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYADLPAALAVLQ-----RYNLT 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I I + ++ + Q+ G +++ I GGGL I Y + Y Sbjct: 185 LVGIHMHIGSGVDYTHLEQVCGAMVNQVIDFGQDLEAISAGGGLSIPYREGEEAIDTDHY 244 Query: 257 ------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 A K+ +EPGRFLVA+ G+LV +V S+K + FV++D ND Sbjct: 245 YGLWSAARDKISAHLGHAVKLEIEPGRFLVAESGVLVAQVRSVKAMGSRHFVLIDAGFND 304 Query: 311 FMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP++Y +YH I+ + D + + GP+CE+GD R + + Sbjct: 305 LMRPSMYGSYHHISALAADGRDLTTAPQVDTVVAGPLCESGDVFTQQEGGKVETRALPVV 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 +PGD L + TGAYGA S YNSR L+PE++ + +IR R T QEL+ L+ Sbjct: 365 QPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDHGVARLIRRRQTIQELLALE 418 >gi|118385090|ref|XP_001025683.1| diaminopimelate decarboxylase family protein [Tetrahymena thermophila] gi|89307450|gb|EAS05438.1| diaminopimelate decarboxylase family protein [Tetrahymena thermophila SB210] Length = 436 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 125/429 (29%), Positives = 191/429 (44%), Gaps = 24/429 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQA 66 + ++ +L TP Y Y++ I++ NA T YA KAN+N A Sbjct: 10 KEMKIGEFTVSELVQKYDTPLYVYNSQVIKERCQQLLNALKLLPTQTKALYACKANTNIA 69 Query: 67 VIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +IK + G G+D VS E+ A A I F+ E++ +L+ GI E Sbjct: 70 IIKLMKEQGIQGIDAVSIQEVLLAKKAGFEGRDIQFTENFIGQKEVEDSLKEGILLCIGE 129 Query: 126 --------SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 + K L + G+K +A R+NPD+ + TG + KFGI +Q Sbjct: 130 LDTLETLGQRLQSKKLVLKETENGQKLKVAVRINPDVGVGECEHTITGGPKSKFGIYCNQ 189 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 I + + P +I G+ HIGS + Q + + + ++ I+VG Sbjct: 190 IEEIIKISEKYPI-EIEGIHQHIGSNMVQNHLDKYVQSIKKIFD--VALQIKGLKFINVG 246 Query: 238 GGLGIAYHSDHRPPS----SSDYASLIHQYFGNLQCKIIL--EPGRFLVADVGILVTKVI 291 GG+G+ Y +P S A + + + EPGRFLVA+ G L+T V Sbjct: 247 GGIGVPYEDGVKPLDLIEAYSKIAEEYKIFKEKYGHDVEIRVEPGRFLVAESGHLLTTVT 306 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG----DRLHIHADIVGPICET 347 +IKK+ T++ D MN +RP LY++YH+I N D ++ G ICE+ Sbjct: 307 AIKKNQYSTWIGTDTGMNHLIRPALYESYHKIENASNFESTNNEDSQRQKVNVCGNICES 366 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 GD NR I + D+L I GAYG + YNSR EI+V+GS +IR R T Sbjct: 367 GDVFGQNRLIRTVKDDDILAIYNGGAYGYCMASNYNSRNRPAEILVDGSVDKLIRRRETL 426 Query: 408 QELIELDSI 416 ++ + Sbjct: 427 EDQLATQIF 435 >gi|154500726|ref|ZP_02038764.1| hypothetical protein BACCAP_04404 [Bacteroides capillosus ATCC 29799] gi|150270615|gb|EDM97924.1| hypothetical protein BACCAP_04404 [Bacteroides capillosus ATCC 29799] Length = 418 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 87/406 (21%), Positives = 142/406 (34%), Gaps = 13/406 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N AF +A+KA N ++K L G Sbjct: 11 LQEMTKTYPTPFHLYDEKGIRENARKLKAAFAWNPGFKEYFAVKATPNPTILKILHEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+FS +E LA + G + Sbjct: 71 GTDCSSLTELMMSDRCGFKGSEIMFSSNDTPAEEFALAAKLGATINLDDFTHIDFLKETI 130 Query: 137 AVSLGKKAPIA--FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + ++ E K+G Q+ + + Sbjct: 131 GYIPETISCRFNPGGTFSIGESKEGFQVMDNPGEAKYGFTREQLFEGFKKLKAMGAKHFG 190 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + A L + + G +I+ I++ GG+G+ Y + + Sbjct: 191 IHAFLASNTLSNEYYPTLAGILFQLAVDLKKETGCDIRFINLSGGVGVPYRPEQPANDIA 250 Query: 255 DYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + + + I E GRF++A G LVTK K + + + A Sbjct: 251 VIGEGVRKQYEAILTPAGMGDVAIFTELGRFMLAPYGCLVTKATHFKHTYKEYVGVDACA 310 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 N RP +Y AYH I + H D+ G +CE D A++R + GDLL Sbjct: 311 ANLM-RPAMYGAYHHITVMGKEDAPCDH-KYDVTGSLCENNDKFAVDRMLPEIDLGDLLV 368 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 I TGA+G YN RL E+++ +IR T + Sbjct: 369 IHDTGAHGFAMGYNYNGRLRSAEVLLKEDGSTELIRRAETPDDYFA 414 >gi|82778214|ref|YP_404563.1| diaminopimelate decarboxylase [Shigella dysenteriae Sd197] gi|309785148|ref|ZP_07679779.1| diaminopimelate decarboxylase [Shigella dysenteriae 1617] gi|81242362|gb|ABB63072.1| diaminopimelate decarboxylase [Shigella dysenteriae Sd197] gi|308926268|gb|EFP71744.1| diaminopimelate decarboxylase [Shigella dysenteriae 1617] Length = 420 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 173/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + +L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTALTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAARQQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALLEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|71907276|ref|YP_284863.1| diaminopimelate decarboxylase [Dechloromonas aromatica RCB] gi|71846897|gb|AAZ46393.1| diaminopimelate decarboxylase [Dechloromonas aromatica RCB] Length = 416 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 112/412 (27%), Positives = 185/412 (44%), Gaps = 23/412 (5%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA TP + Y I + FD +V +A KANSN +++ + G+ +D Sbjct: 12 LAQQFGTPLWIYDADTITRQIAALR-LFD----VVRFAQKANSNTHILRLMKRQGAVVDS 66 Query: 81 VSEGELRRA-LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 VS GE+ RA P + + T D +D A + + N+ + + + Sbjct: 67 VSLGEIERALAGGFTPGLHNGDADIVFTADLLDRATLARVVELNIPVNCGSMDMLDQLGA 126 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + P+ R+NP KK +TG + K GI + + G+ MH Sbjct: 127 VNPGHPVWLRINPGFGHGHSKKTNTGGEHSKHGIWHGDLVRACEKIKANGLA-LQGLHMH 185 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 IGS + + + L + + + G ++ I GGGL + Y + ++ Y SL Sbjct: 186 IGSGV-DYAHLQEVCGAMLKLVEVVNAQGLDLHAISAGGGLSVPYQAGEPTIDTAHYFSL 244 Query: 260 IHQYFG------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 K+ +EPGR+L+A+ G+LVT+V + K+ FV++D +D +R Sbjct: 245 WDAVRHAVEQLLEHPVKLEIEPGRYLMAESGVLVTEVRATKQQGANHFVMVDAGFSDLVR 304 Query: 314 PTLY--DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-------NRKIALPRPGD 364 P LY E+ + A + L + GP+CE+GD +R + + GD Sbjct: 305 PALYGAYHGMELIHSDGTAVNGLQFDTVVAGPLCESGDVFTQGDGGVLLHRSLPQAQVGD 364 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 LL + TGAYGA S YN+R LI E+++ + +IR R T EL+ L+++ Sbjct: 365 LLVLHDTGAYGASMSSNYNARPLIAEVLMENGEPRLIRRRQTVAELLALEAV 416 >gi|292669999|ref|ZP_06603425.1| diaminopimelate decarboxylase [Selenomonas noxia ATCC 43541] gi|292648365|gb|EFF66337.1| diaminopimelate decarboxylase [Selenomonas noxia ATCC 43541] Length = 419 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 94/402 (23%), Positives = 157/402 (39%), Gaps = 16/402 (3%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGSGL 78 +L TPF+ Y I N+ AF +A+KA N +++ L G+G Sbjct: 15 ELIKRWPTPFHIYDEAKIRANFRRLREAFSWAPGFREHFAVKALPNPRIVQILHEEGAGT 74 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S EL + AA V E I+ + +E A+ G + Sbjct: 75 DCSSIAELLISAAAGVKGEEIMLTSNDTPWEEFQKAIALGAVINLDDLS-----HLDYMA 129 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + I E K+G+ Q+ Y A + + M Sbjct: 130 EHAGLPEVLSFRYNPGDLIEGNDIIGKPVEAKYGLTRPQMFEGYRRAQEMGVKRFGLHTM 189 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 I S++ A + + ++ G ++ +++GGG GI Y + P + + Sbjct: 190 VISSELRTEAFLLTARIMFELAAELKKNLGICVEFVNLGGGFGIPYRPEENPIDYAAVGA 249 Query: 259 LIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 I + + ++ I E GR + D G LV+ V+ K + K ++ LD M + Sbjct: 250 GIERLYNDIMRPAGLGSTAIRTESGRAITGDAGWLVSTVLHEKDT-YKKYIGLDSCMANL 308 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 MRP LY AYH I + HI D+ G +CE D A++R + GD++ I T Sbjct: 309 MRPALYGAYHHITVLGKENAPADHI-YDVTGSLCENNDKFAIDRALPKIDIGDIVVIHDT 367 Query: 372 GAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 GA+G+ YN +L E+++ +IR T + Sbjct: 368 GAHGSAMGFNYNGKLWCAELLLRTDGTIELIRRAQTLDDYFA 409 >gi|163814909|ref|ZP_02206297.1| hypothetical protein COPEUT_01060 [Coprococcus eutactus ATCC 27759] gi|158449848|gb|EDP26843.1| hypothetical protein COPEUT_01060 [Coprococcus eutactus ATCC 27759] Length = 418 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 94/410 (22%), Positives = 149/410 (36%), Gaps = 15/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 E++ + TPF+ Y I +N AF +A+KA N ++K Sbjct: 5 FITKAKAEEIIKEIPTPFHIYDEKGIRENARKLYKAFSWNKGFKEYFAVKATPNPTILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G D S EL + + I+FS +E LA + + Sbjct: 65 LKEEGCGTDCSSLTELMMSDKMGFKGDEIMFSSNDTPAEEFVLAKKLNATINLDDFTHID 124 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 S G I R NP + I + K+G+ QI Y Sbjct: 125 FLEK----SAGIPEKICCRFNPGGKFSISTTIMDNPGDAKYGMTKDQIIEAYKILKAKGV 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A L + G + I++ GG+GI Y D P Sbjct: 181 KRFGMHAFLASNTVTNEYYPTLAKILFETAVEIKEKTGVKLDFINLSGGVGIPYTPDKEP 240 Query: 251 PSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + I E GRF++A G LVT I K + K ++ Sbjct: 241 NDIMVIGEGVRKVYEEVLVPAGMGDVAIFTELGRFMLAPYGHLVTTAIHEKHT-HKEYIG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + MRP +Y AYH I + + D+ G +CE D A++R + G Sbjct: 300 VDACAVNLMRPAMYGAYHHITVLGK-ENEPCDHKYDVTGSLCENNDKFAIDRMLPKIDMG 358 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 D+L I TGA+G YN +L E+++ + +IR T ++ Sbjct: 359 DILVIHDTGAHGFAMGYNYNGKLKSAEVLLRPDGSWRLIRRAETPEDYFA 408 >gi|325265039|ref|ZP_08131766.1| protein TabA [Clostridium sp. D5] gi|324029729|gb|EGB91017.1| protein TabA [Clostridium sp. D5] Length = 428 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 93/414 (22%), Positives = 147/414 (35%), Gaps = 14/414 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQA 66 L+++ TPF+ Y I +N AF +A+KA N Sbjct: 2 NKETFVTKAQLDEIVKEFPTPFHLYDEKGIRENVKALKEAFSWNPGYKEYFAVKATPNPF 61 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I L G G D S EL + A + E I+FS +E LA + G + Sbjct: 62 LIDILKEYGCGCDCSSYTELMLSDAVGIRGEDIMFSSNDTPAEEFILADKLGAIINLDDI 121 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 I+ R NP I + K+G+ Q++ + Sbjct: 122 THIDFLEQTIGHIPE---VISCRYNPGGLFKISNDIMDNPGDSKYGMTTPQMYEAFKILK 178 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + + + A L + G +I I++ GG+GI Y Sbjct: 179 EKGAKEFGIHAFLASNTVTNEYYPMLAKVLFEQAVSLQKETGVHISFINLSGGIGIPYRP 238 Query: 247 DHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 P + + + I E GR+++ G LVTK I K + K Sbjct: 239 GQEPNDIRIIGDGVRRVYEEVLVPAGMGDVAIYTELGRYMMGPYGCLVTKAIHEKHT-HK 297 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 ++ +D + MRP +Y AYH I + H D+ G +CE D A++R + Sbjct: 298 EYIGVDACAVNLMRPAMYGAYHHITVMGKEDWPCDH-KYDVSGSLCENNDKFAIDRMLPE 356 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GD L I TGA+G YN +L E+++ +IR T + Sbjct: 357 VEMGDYLVIHDTGAHGFSMGYNYNGKLKSAEVLLKEDGSAQLIRRAETPADYFA 410 >gi|317503132|ref|ZP_07961202.1| diaminopimelate decarboxylase [Prevotella salivae DSM 15606] gi|315665748|gb|EFV05345.1| diaminopimelate decarboxylase [Prevotella salivae DSM 15606] Length = 385 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 143/375 (38%), Positives = 200/375 (53%), Gaps = 7/375 (1%) Query: 25 VQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 TPFY Y T ++ T + A V YA+KAN+N +++ + G G D VS Sbjct: 14 YPTPFYYYDTKLLQATLHTISTEAVKHKGFHVHYAVKANANPTLLRMIQEAGLGADCVSG 73 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GE++ ++AA +IV++GVGK EI+L L I+CFNVES EL+ +NQ A K Sbjct: 74 GEIKASIAAGFKPSQIVYAGVGKNDWEINLGLDQDIFCFNVESLPELEVINQLAACKSKI 133 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 A IA R+NP+I A+TH I TG E+KFGI +H +H L A+ + VK+ G+ HIGSQ Sbjct: 134 AHIALRINPNIGAHTHSNIVTGLAENKFGIAMHDMHDLIERATKMKNVKLIGLHFHIGSQ 193 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG--GLGIAYHSDHRPPSSSDYASLIH 261 I + F K K + +L QL +G ++HI+VGG G+ + H P Y Sbjct: 194 ILDMTDFIKLCKRINELQDQLAEHGITLEHINVGGGLGIDYEHPQAHSIPDFKTYFDTFD 253 Query: 262 -QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 Q +I E GR +V G L+T+V+ +KK +K FVI+D M + +RP LY A Sbjct: 254 THLKHYPQQQIHFELGRSVVGQCGSLITRVLYVKKGTNKQFVIVDAGMTELIRPALYHAT 313 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 H I N D+VGPICE+ D A + ++ + GDLL I GAYG + + Sbjct: 314 HHIE---NLNSTMEEETYDVVGPICESSDVFAKDIQLNKTQRGDLLAIRSAGAYGEIMAS 370 Query: 381 TYNSRLLIPEIMVNG 395 YN R L N Sbjct: 371 GYNCRELPKSYFTND 385 >gi|266619241|ref|ZP_06112176.1| diaminopimelate decarboxylase [Clostridium hathewayi DSM 13479] gi|288869234|gb|EFD01533.1| diaminopimelate decarboxylase [Clostridium hathewayi DSM 13479] Length = 422 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 99/404 (24%), Positives = 150/404 (37%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y I +N AF +A+KA N ++ L G Sbjct: 12 LEEIVKQYPTPFHIYDEKGIRENAKKLKEAFAWNPGYKEYFAVKATPNPFILNILKEFGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D SE EL A A I+FS +E A + G + N Sbjct: 72 GTDCSSETELMMADALGFSGSDIMFSSNDTPAEEFRFAHKIGAIINLDDITHIEYLENAI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ Q+ Y Sbjct: 132 G---EIPETISCRYNPGGVFKISNDIMDNPGDSKYGMTTEQMFEAYQVLKEKGAKHFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G +IQ I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNEYYPLLAKILFELAVKLKEETGAHIQFINLSGGIGIPYRPDQEPNDIMAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GR+++ G LVT+ I K + K +V +D Sbjct: 249 GEGVRKAYEEILVPAGMDDVAIYTELGRYMLGPYGALVTRAIHEKHT-HKEYVGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH + + D D+VG +CE D A++R + GDLLYI Sbjct: 308 NLMRPAMYGAYHHVTVMGR-ENDPCDHKYDVVGSLCENNDKFAIDRMLPEIHKGDLLYIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T ++ Sbjct: 367 DTGAHGFAMGYNYNGKLKSAELLLKEDGSVEMIRRAETPKDYFA 410 >gi|300723903|ref|YP_003713214.1| diaminopimelate decarboxylase, PLP-binding [Xenorhabdus nematophila ATCC 19061] gi|297630431|emb|CBJ91096.1| diaminopimelate decarboxylase, PLP-binding [Xenorhabdus nematophila ATCC 19061] Length = 431 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 118/424 (27%), Positives = 187/424 (44%), Gaps = 36/424 (8%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L +L TP + Y I K FD ++ +A KA SN +++ + G Sbjct: 18 NLLRLPAQYGTPLWLYDGDNIIKQIKKLKQ-FD----VIRFAQKACSNTHILRLMREQGV 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A R V + L + ++ + + Sbjct: 73 KVDSVSLGEVERALYAGFQPGRDKSEIVFTADVIDEATLSR-VIELDIPVNVGSIDMLDQ 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + P+ R+NP +K +TG + K GI + K++G+ Sbjct: 132 IGTRQSGHPVWLRLNPGFGHGHSQKTNTGGENSKHGIWYQDLPLAIEKIHQYGL-KLAGL 190 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS + + + + +Q+ G +IQ I GGGL I Y++ + Y Sbjct: 191 HMHIGSGV----DYQHLASVCNAMVEQVILCGEDIQAISAGGGLSIPYNTGEEAVDTEHY 246 Query: 257 ASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 SL H+ ++ + +EPGRFLVA+ GIL+ +V ++K + +V++D +D Sbjct: 247 YSLWHEARQRIEQHLGHAVELEIEPGRFLVAESGILMAEVRAVKSMGSRNYVLVDAGFSD 306 Query: 311 FMRPTLYDAYHEIN------------YIVNPAGDRLHIHADIVGPICETGDFIAL----- 353 MRP +Y +YH I+ + + L + GP+CE+GD Sbjct: 307 LMRPAMYGSYHHISVLPVEQSENGTSMQEAGSQETLLQETLVAGPLCESGDVFTQLEGGE 366 Query: 354 --NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 R + R GD L TGAYGA S YNSR LIPE++ + H+IR R T +EL+ Sbjct: 367 VVPRMLPSVRVGDYLIFHDTGAYGASMSSNYNSRPLIPEVLFIEGEVHLIRRRQTIEELL 426 Query: 412 ELDS 415 L+S Sbjct: 427 LLES 430 >gi|55377115|ref|YP_134965.1| ornithine decarboxylase [Haloarcula marismortui ATCC 43049] gi|55229840|gb|AAV45259.1| ornithine decarboxylase [Haloarcula marismortui ATCC 43049] Length = 434 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 104/399 (26%), Positives = 187/399 (46%), Gaps = 5/399 (1%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 LE +A TP Y + +NY F+ AF D V YA KA++ QAV+ L G+ Sbjct: 41 RLEAVAAEHGTPLYVVDLDRVAENYERFAAAFP--DAHVMYAAKAHTGQAVLSKLLETGA 98 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 ++ + GEL+RA+ A + ++ V ++D A++ + + R Sbjct: 99 DIECAAWGELQRAIDAGADPNTLQYTAVNPPDRDLDRAVELAAEHPGLTITGGARDTFDR 158 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G +A R+NP I H+K+ K+ KFGIP ++ + A + Sbjct: 159 LEERGYNGRVAIRINPGIGTGHHEKV-ATGKDAKFGIPYDEVPEVAADVRERFDLVGLHA 217 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 G D ++ +A + D+ +++ ++G + +D GGG G+ Y D P Sbjct: 218 HAGSGVLHDDLDDHCRAIGKVADMGREVIADGAELDFVDFGGGFGVPYREDVEPLDMEIV 277 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + + G+L ++ LEPGR++VAD ++T+V ++K++ T V +D ++ +RP + Sbjct: 278 GEKVREAVGDLDAQVKLEPGRYVVADAECILTEVNTVKETPAATVVGVDASLATLIRPAM 337 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 + +YH I + A +R + GP C + D +R +A P DLL I GAYG Sbjct: 338 FGSYHPIRNVT--APEREAEPVSVGGPCCTSADVFCTDRPLARPERTDLLAIGNAGAYGY 395 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + ++S+ E+ G + ++R R T ++ ++ Sbjct: 396 ELANQFHSQPRPAEVAFEGGETRVVRERETLADVTRMER 434 >gi|254774026|ref|ZP_05215542.1| diaminopimelate decarboxylase [Mycobacterium avium subsp. avium ATCC 25291] Length = 446 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 109/421 (25%), Positives = 178/421 (42%), Gaps = 18/421 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 EG L V L +A TP Y V YA K+ + A Sbjct: 31 EEGRLCVGGVPLGDVADEFGTPVYVVDEADFRC--RARRYRRALRGVEVVYAGKSLLSTA 88 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + G+D+ S GEL ALA V RIV G K+ +E+ A++ G+ ++S Sbjct: 89 VARWAREERLGVDVCSAGELATALAGGVDPARIVMHGNAKSPEELREAVRVGVGRIVLDS 148 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAY 184 E+ L ++ P+ RV PDI+ + H+ ++TG + KFG + Sbjct: 149 TIEIAYLA---GLARRRQPVLIRVTPDIDIHGHRAVTTGVSDQKFGFTLAGDHAADAVRR 205 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 P + + G+ H+GSQ+ + +A + + +R+ + +++GGG I Sbjct: 206 VLAHPILDLVGLHCHLGSQVSDPALYGEAIRRMIAAMADVRARHGVILTELNIGGGHAIP 265 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVIS-IKK 295 Y S + A +I + +I++EPGR + G+ + +V S + Sbjct: 266 YASGDPELNLDQLADVIEDALDEACAAERFPRPQIVVEPGRAISGRAGVTLYRVCSVKTQ 325 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +TFV +D M+D R +LY A + + N L + G CE+GD IA + Sbjct: 326 CGGRTFVAVDGGMSDNPRVSLYGARY-AVALANRHPLGLKQRVTVAGRHCESGDEIARDV 384 Query: 356 KIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + RPGDLL + TGAY + YN P + V+ + + R T +L+ D Sbjct: 385 GLPADLRPGDLLAVACTGAYHHSMASNYNMVGRPPLVAVSEGRARELVRRETVADLLARD 444 Query: 415 S 415 Sbjct: 445 R 445 >gi|118464302|ref|YP_880409.1| diaminopimelate decarboxylase [Mycobacterium avium 104] gi|118165589|gb|ABK66486.1| diaminopimelate decarboxylase [Mycobacterium avium 104] Length = 444 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 109/421 (25%), Positives = 178/421 (42%), Gaps = 18/421 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 EG L V L +A TP Y V YA K+ + A Sbjct: 29 EEGRLCVGGVPLGDVADEFGTPVYVVDEADFRC--RARRYRRALRGVEVVYAGKSLLSTA 86 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + G+D+ S GEL ALA V RIV G K+ +E+ A++ G+ ++S Sbjct: 87 VARWAREERLGVDVCSAGELATALAGGVDPARIVMHGNAKSPEELREAVRVGVGRIVLDS 146 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYAY 184 E+ L ++ P+ RV PDI+ + H+ ++TG + KFG + Sbjct: 147 TIEIAYLA---GLARRRQPVLIRVTPDIDIHGHRAVTTGVSDQKFGFTLAGDHAADAVRR 203 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 P + + G+ H+GSQ+ + +A + + +R+ + +++GGG I Sbjct: 204 VLAHPILDLVGLHCHLGSQVSDPALYGEAIRRMIAAMADVRARHGVILTELNIGGGHAIP 263 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVIS-IKK 295 Y S + A +I + +I++EPGR + G+ + +V S + Sbjct: 264 YASGDPELNLDQLADVIEDALDEACAAERFPRPQIVVEPGRAISGRAGVTLYRVCSVKTQ 323 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 +TFV +D M+D R +LY A + + N L + G CE+GD IA + Sbjct: 324 CGGRTFVAVDGGMSDNPRVSLYGARY-AVALANRHPLGLKQRVTVAGRHCESGDEIARDV 382 Query: 356 KIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + RPGDLL + TGAY + YN P + V+ + + R T +L+ D Sbjct: 383 GLPADLRPGDLLAVACTGAYHHSMASNYNMVGRPPLVAVSEGRARELVRRETVADLLARD 442 Query: 415 S 415 Sbjct: 443 R 443 >gi|254173501|ref|ZP_04880173.1| diaminopimelate decarboxylase [Thermococcus sp. AM4] gi|214032193|gb|EEB73023.1| diaminopimelate decarboxylase [Thermococcus sp. AM4] Length = 412 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 104/404 (25%), Positives = 176/404 (43%), Gaps = 16/404 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM---VCYAL 59 + L + +LA TP Y Y+ + I NYL ++A + YA+ Sbjct: 8 HLRAVGNRLFIGEHDVVELAEKHGTPVYIYNLSRIRDNYLRMADALKKAGFREWRIHYAM 67 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG- 118 KAN+N+ V+ + LG G+D S GE++ A E I+F+G + +++ ++ Sbjct: 68 KANNNKEVLGLIRELGGGIDATSPGEVKLAREIGFKDEDIIFTGTSLSNGDLEFLAKTNV 127 Query: 119 -IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 I +V S R V L + + S K G I + Sbjct: 128 LINFDSVSSLRRFNGEEGRKVGLRINTGVGIGRVEKTTTGGLEVGSIPVKFGISGKAIDR 187 Query: 178 IHSLYAYASTLPGVKISGVDMHI---GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 L G+++ + H+ F LL+ + G +++ I Sbjct: 188 AFDLIEE----KGLELHCLHHHVGSDWVGEKIARYFQALDNLLKVAEKAEARFGGSLKVI 243 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC---KIILEPGRFLVADVGILVTKVI 291 D+GGG G+ + ++ ++ + ++ K+I+EPG +LV+D GILV +V Sbjct: 244 DLGGGYGVPHSAEEEEFPVYEFFQRVKEHMEEYGFGDLKVIVEPGTYLVSDAGILVAQVN 303 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 ++++ + FV +D +N F P LY+ YHEI N + A +VG ICE+GD Sbjct: 304 TVEEKNGRIFVGVDAGLNVFNSPALYNYYHEIVVC-NRVSSEEKMVATVVGNICESGDIF 362 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 A++R++ GD + I GAYG V + YN R E++V G Sbjct: 363 AVDRELPKIEEGDYIAILNAGAYGYVMANNYNLRPKGKEVVVGG 406 >gi|40062569|gb|AAR37506.1| diaminopimelate decarboxylase [uncultured marine bacterium 159] Length = 418 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 113/410 (27%), Positives = 183/410 (44%), Gaps = 18/410 (4%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTL 71 + L+ ++ TP Y Y I N A + +A+K+N+N ++ + Sbjct: 12 DGARLKNISEEYGTPLYTYFGEIICNNLDRIDTALRANFDKYQIYFAVKSNNNPNLLAFM 71 Query: 72 AHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G D S GEL A A +P + V++G +++D++ A+ SG + S Sbjct: 72 HQYLPTLGADCSSPGELVVAERAEIPMKNCVYTGNYESMDDLQSAVNSGCEINLDDETSF 131 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 ++ N +G I+FR+NP + +I TG +E KFGIP+ +I ++Y A Sbjct: 132 IRLKN-----IGIPEYISFRLNPGVGKGRFAEIVTGGREAKFGIPVEKIAAVYKSALADG 186 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + +DQ +L+ + H + I +G G GI Y D Sbjct: 187 VKTFGLQCHSGSAILDQNHFRENTELILKTARHIEDAIDHRLLKISIGSGFGIPYADDED 246 Query: 250 PPSSSD-------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 P + +D + + + +EPGR LV D IL+ +V IK S KTF+ Sbjct: 247 PLNFNDVFGLVAEIFKEFYGQHQHDWPVLCIEPGRALVGDAAILLAQVTGIKDS-YKTFI 305 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 LD M MRP LY A H Y V + ++ DI G ICE D +A++ Sbjct: 306 GLDAGMETLMRPALYGAVHR-IYKVGALMEEQNLTVDITGRICENTDRLAIDIPFPDVAE 364 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 GDL+ I TGAYG + +N+R E++++ + H+IR R T +++ Sbjct: 365 GDLIAIMDTGAYGYAMAHQFNTRPRPAEVLIDKDKPHLIRSRETVEDIFR 414 >gi|296875968|ref|ZP_06900027.1| diaminopimelate decarboxylase [Streptococcus parasanguinis ATCC 15912] gi|322390075|ref|ZP_08063610.1| diaminopimelate decarboxylase [Streptococcus parasanguinis ATCC 903] gi|296433043|gb|EFH18831.1| diaminopimelate decarboxylase [Streptococcus parasanguinis ATCC 15912] gi|321143202|gb|EFX38645.1| diaminopimelate decarboxylase [Streptococcus parasanguinis ATCC 903] Length = 416 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 101/404 (25%), Positives = 165/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE L TPF+ Y I + AF +A+KA N +++K L G Sbjct: 11 LESLTQEFPTPFHLYDEAGIRETARALHQAFAWNEGFKEYFAIKATPNPSILKILQEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL A + I+FS DE A + G E + Sbjct: 71 GVDTASYVELLMADKLGFSGKEIMFSSNNTPADEFVYARELGATINLDA--YEDIAFLKS 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 S+ K + T I +E KFG+ Q+ + L + Sbjct: 129 VTSIPKVISCRYNPGGVFELGTD--IMDNPEEAKFGMTKEQLIQAFIELKELGVEEFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + G ++ I++ GG+G+ Y + P + Sbjct: 187 ALLASNTVSNDYYPELARQLFELAVEVVEKTGVHLGFINLSGGVGVNYKPEQEPNDIAII 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ F + KI E GRF++A G+LVT+V KK+ +T+V +D + Sbjct: 247 GEGVHRVFDEILKPAGLGHVKIYTELGRFMLASHGLLVTRVTHKKKT-YRTYVGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y AYH I + D D+VG +CE D A R++ + GDLL I Sbjct: 306 NLLRPAMYGAYHHITNMDR--PDGPTEVVDVVGSLCENNDKFAKQRELPVTEIGDLLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN++L E+++ Q +IR ++ + Sbjct: 364 DTGAHGFSMGYQYNAKLRSAEVLLQEDGQARLIRRAEKPEDYLA 407 >gi|320530481|ref|ZP_08031539.1| putative diaminopimelate decarboxylase [Selenomonas artemidis F0399] gi|320137314|gb|EFW29238.1| putative diaminopimelate decarboxylase [Selenomonas artemidis F0399] Length = 425 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 92/402 (22%), Positives = 153/402 (38%), Gaps = 16/402 (3%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGSGL 78 +L TPF+ Y I NY +AF +A+KA N +++ L G+G Sbjct: 15 ELIKQFPTPFHIYDERRIRANYRRLRDAFAWAPGFREHFAVKALPNPRIVQLLHEEGAGT 74 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S EL + AA V E I+ + DE A++ G + T Sbjct: 75 DCSSIAELLISEAAGVTGEEIMLTSNDTPFDEFQKAIELGAVINLDD-----ITHLAYMA 129 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + I E K+G+ Q+ YA A + + M Sbjct: 130 EHAGVPEVLSFRYNPGDTIEGNDIIGKPVEAKYGLTHTQMLEGYARARAMGVRRFGLHTM 189 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 I +++ A + + G +++ +++GGG GI Y + P + + Sbjct: 190 VISAELRTEAFLLTARIMFELAVELEEKLGIHVEFVNLGGGFGIPYRPEEDPVDFAAVGA 249 Query: 259 LIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 I + + + I E GR + D G LV+ V+ K + + N Sbjct: 250 GIERLYNEIMRPAGLGDVAIRTESGRAITGDAGWLVSMVLHKKDTYKHYVGLDSCMANLM 309 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 RP LY AYH I + H+ D+ G +CE D A++R + GD++ I T Sbjct: 310 -RPALYGAYHHITVLGKEHAPADHV-YDVTGSLCENNDKFAIDRALPQIGIGDIIVIHDT 367 Query: 372 GAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+G+ YN +L E+++ +IR T + Sbjct: 368 GAHGSAMGFNYNGKLHCAELLLREDGTVELIRRAQTLDDYFA 409 >gi|15806761|ref|NP_295481.1| diaminopimelate decarboxylase [Deinococcus radiodurans R1] gi|13124089|sp|Q9RTK2|DCDA_DEIRA RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|6459531|gb|AAF11313.1|AE002017_4 diaminopimelate decarboxylase [Deinococcus radiodurans R1] Length = 379 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 122/399 (30%), Positives = 190/399 (47%), Gaps = 26/399 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L+ A TP Y Y ++ AF D + YA+KAN N +++ A G Sbjct: 7 ALQDAAQRFGTPLYLYDAEELDAALWRVQRAFG--DARIFYAMKANPNLNLLRRYAAAGV 64 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G + VS GEL RA AA ER++ +G K+ E A + G + Sbjct: 65 GFECVSLGELLRAEAAGAGGERMILNGPAKSDAEYAAAARLGATIVVDR--------EEE 116 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 V L + + RVNP + +TH+ ++TG KFG+ Q+ A G ++ G+ Sbjct: 117 VVLLPPGSRVLVRVNPAMTVSTHEHLATGTARSKFGLTPEQVPGTLAELRD-AGHEVLGL 175 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 MHIGS I+Q E F AF + +LR++ + ++VGGG + Sbjct: 176 HMHIGSAIEQAEDFTAAFARVT----ELRAHIGGLSVLNVGGGWSLNAD-------LEGI 224 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 A H+ ++ +EPGR+LVA G L+T+V+ K++ + F ++D M +F+RP L Sbjct: 225 AYEAHEAARVFGAELWVEPGRYLVASAGWLLTRVVGTKRT-GRNFCLVDAGMTEFLRPML 283 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 Y A H + + + D+ GP CE+GD IA + P+ G LL I + GAYGA Sbjct: 284 YGASHPLYPMWDAL---ATEVWDVAGPACESGDLIARGVPLPTPQRGHLLLIGEAGAYGA 340 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 S TY SR E++ G + ++R R T Q++ + Sbjct: 341 SMSSTYLSRPRPAEVLWTGHDWQLLRRRETPQDIWAAEV 379 >gi|295094252|emb|CBK83343.1| Diaminopimelate decarboxylase [Coprococcus sp. ART55/1] Length = 433 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 94/410 (22%), Positives = 148/410 (36%), Gaps = 15/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 E++ + TPF+ Y I +N AF +A+KA N ++K Sbjct: 20 FITKAKAEEIIREIPTPFHIYDEEGIRENARKLYKAFSWNKGFKEYFAVKATPNPTILKI 79 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G D S EL + + I+FS +E LA + + Sbjct: 80 LKEEGCGTDCSSLTELMMSDKMGFKGDEIMFSSNDTPAEEFVLAKKLNATINLDDFTHID 139 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 G I R NP + I + K+G+ QI Y Sbjct: 140 FLEKAA----GIPEKICCRFNPGGKFSISTTIMDNPGDAKYGMTKDQIIEAYKILKAKGV 195 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A L + G + I++ GG+GI Y D P Sbjct: 196 KRFGMHAFLASNTVTNEYYPTLAKILFETAVEIKEKTGVKLDFINLSGGVGIPYTPDKEP 255 Query: 251 PSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + I E GRF++A G LVT I K + K ++ Sbjct: 256 NDIMVIGEGVRKVYEEVLVPAGMGDVAIFTELGRFMLAPYGHLVTTAIHEKHT-HKEYIG 314 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + MRP +Y AYH I + + D+ G +CE D A++R + G Sbjct: 315 VDACAVNLMRPAMYGAYHHITVLGK-ENEPCDHKYDVTGSLCENNDKFAIDRMLPKIDMG 373 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 D+L I TGA+G YN +L E+++ F +IR T ++ Sbjct: 374 DILVIHDTGAHGFAMGYNYNGKLKSAEVLLRPDGSFKLIRRAETPEDYFA 423 >gi|89897723|ref|YP_521210.1| hypothetical protein DSY4977 [Desulfitobacterium hafniense Y51] gi|219670871|ref|YP_002461306.1| diaminopimelate decarboxylase [Desulfitobacterium hafniense DCB-2] gi|89337171|dbj|BAE86766.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219541131|gb|ACL22870.1| diaminopimelate decarboxylase [Desulfitobacterium hafniense DCB-2] Length = 416 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 156/404 (38%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L+K+ TPF+ Y AI KN AF +A+KA N ++K L G Sbjct: 13 LQKIMEDYGTPFHIYDEEAIRKNAQRLQAAFAWAPGFKEYFAVKALPNPYILKILGEEGF 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A A + E I+ + +E A + Sbjct: 73 GADCSSLAELILAEKAGITEENIMLTSNNTPAEEFQKAKDLWAIINLDDITHIDYLEKHT 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + NA I +E K+G+ Q+ Y + Sbjct: 133 GLPEVLSFRYNPGSLRAGNA-----IIGNPEESKYGLTKEQLFQAYEIVRDKGVKRFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M I ++++ A + + G ++ ++ GGG+GI Y + P + Sbjct: 188 TMIISNELNPDFFIETAEMMFDLAIELKEKLGIRLEFVNFGGGIGIPYRPEQEPVNLETI 247 Query: 257 ASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + +I LE GR + G LVTKV+ K + K ++ +D +M+ Sbjct: 248 GEGVRKVYEEKIVAKGLDPLRICLECGRMITGPYGYLVTKVLHRKDT-YKNYIGVDASMS 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 D MRP +Y AYH I + HI D+ G +CE D A++R++ GD L I Sbjct: 307 DLMRPGIYGAYHHITVMGKEDLPEDHI-YDVTGSLCENNDKFAVDRELPRIEIGDTLVIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T ++ Sbjct: 366 DTGAHGHAMGFNYNGKLRHAELLLQADGSVKLIRRAETLEDYFA 409 >gi|166031743|ref|ZP_02234572.1| hypothetical protein DORFOR_01443 [Dorea formicigenerans ATCC 27755] gi|166028196|gb|EDR46953.1| hypothetical protein DORFOR_01443 [Dorea formicigenerans ATCC 27755] Length = 423 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 152/404 (37%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I KN AF +A+KA N +I L G Sbjct: 12 LDEIIKKYPTPFHLYDEKGIRKNMQALKEAFAWNPGYKEYFAVKATPNPFLIDILREYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A V E I+FS +E +LA + G + Sbjct: 72 GCDCSSYTELLLSDAMGVKGEDIMFSSNDTPREEYELAHKLGAIINLDDITHIDFLEE-- 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + KFG+ Q+ + + + Sbjct: 130 -TIGEIPETISCRYNPGGLFKISNDIMDNPGDAKFGMTTEQLFEAFKILKSKGAKEFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + + G +I+ I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNEYYPMLAKVLFEVAVKLQKEVGIHIKFINLSGGIGIPYTPDQEPNDIRAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + E GRF++ G LVTK I K + K ++ +D Sbjct: 249 GDGVREVYNEVLVPAGMGDVALYTELGRFMLGPYGCLVTKAIHEKHT-HKEYIGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H D+ G +CE D A++R + GD+L I Sbjct: 308 NLMRPAMYGAYHHITVMGKEDVPCDH-KYDVTGSLCENNDKFAIDRMLPKIDMGDVLMIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T + Sbjct: 367 DTGAHGFSMGYNYNGKLKSAEVLLKEDGSTQLIRRAETPADYFA 410 >gi|21672689|ref|NP_660756.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008347|sp|Q8K9C4|DCDA_BUCAP RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|21623329|gb|AAM67967.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 415 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 125/422 (29%), Positives = 195/422 (46%), Gaps = 33/422 (7%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 +L+ EN+ + L Q+PF+ Y + I K FD +V +A KA SN +++ Sbjct: 11 NLNFENIKI--LIKKFQSPFWVYDSNIIHKKINLLKE-FD----IVRFAQKACSNIHILR 63 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 + +D VS GE+ RAL A + + T D D S + F + + Sbjct: 64 LMKQKNIKVDAVSLGEIERALVAGFKPN---SNEIIFTADLFDEETLSKVIDFKIPVNAG 120 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + ++ L + R+NP KK +TG + K GI L Sbjct: 121 SIDMLEQLGKLSPGHHVWLRINPGFGHGHSKKTNTGGENSKHGI---WNPRLAIPIIKKY 177 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 +K+ G+ MHIGS + ++ K+ + + ++ I I GGGL I Y + + Sbjct: 178 KLKLIGLHMHIGSGV----NYKHLKKVGQAMIEKAMEINEKILFISAGGGLPIPYTFNEK 233 Query: 250 PPSSSDYASLIHQYFG------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 P + Y + + N ++ +EPGRFLVA+ GIL+++V +IKK DK FV+ Sbjct: 234 PIDTKKYFIIWDEARKKISRFLNTPIQLEIEPGRFLVAESGILISQVRAIKKMGDKNFVL 293 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPA---GDRLHIHADIVGPICETGDFIALN------ 354 +D ND MRPT+Y +YH ++ + + I I GP+CE+GD Sbjct: 294 IDAGFNDLMRPTMYGSYHHVSVVTKDDRNIHETETIDTIIGGPLCESGDIFTQKEGGNIT 353 Query: 355 -RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 RK+ + + GD L GAYGA S YN+R LI EI++ + F IR R EL+ L Sbjct: 354 TRKLPILKIGDYLIFHDVGAYGASMSSNYNTRPLIQEILLENNTFRTIRRRQKINELLNL 413 Query: 414 DS 415 + Sbjct: 414 EK 415 >gi|312868226|ref|ZP_07728426.1| putative diaminopimelate decarboxylase [Streptococcus parasanguinis F0405] gi|311095971|gb|EFQ54215.1| putative diaminopimelate decarboxylase [Streptococcus parasanguinis F0405] Length = 416 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 99/404 (24%), Positives = 164/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE L TPF+ Y I + AF +A+KA N +++K L G Sbjct: 11 LESLTQEFPTPFHLYDEAGIRETARALHQAFAWNEGFKEYFAIKATPNPSILKILQEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL A + I+FS DE A + G E + Sbjct: 71 GVDTASYVELLMADKLGFSGKEIMFSSNNTPADEFVYARELGATINLDA--YEDIAFLKS 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + K + T I +E KFG+ Q+ + L + Sbjct: 129 VTGIPKVISCRYNPGGVFELGTD--IMDNPEEAKFGMTKEQLIQAFIELKELGVEEFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + G ++ I++ GG+G+ Y + P + Sbjct: 187 ALLASNTVSNDYYPELARQLFELAVEVVEKTGVHLGFINLSGGVGVNYKPEQEPNDIAII 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ F + KI E GRF++A G+LVT+V KK+ +T+V +D + Sbjct: 247 GEGVHRVFDEILKPAGLGHVKIYTELGRFMLASHGLLVTRVTHKKKT-YRTYVGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y AYH I + + D+VG +CE D A R++ + GDLL I Sbjct: 306 NLLRPAMYGAYHHITNMDR--PEGPTEVVDVVGSLCENNDKFAKQRELPVTEIGDLLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN++L E+++ Q +IR ++ + Sbjct: 364 DTGAHGFSMGYQYNAKLRSAEVLLQEDGQARLIRRAEKPEDYLA 407 >gi|161833742|ref|YP_001597938.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri GWSS] gi|152206232|gb|ABS30542.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri GWSS] Length = 399 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 119/396 (30%), Positives = 187/396 (47%), Gaps = 16/396 (4%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGL 78 L TP Y Y IE Y F + + + YA KAN+N +++ LGSGL Sbjct: 9 DLTKRYGTPLYVYDANQIEFQYKLIKKYFFYIENLKINYACKANTNISILNFFKKLGSGL 68 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D VS E+ L A + I+++ G ++ EI A+++G+ L ++ Sbjct: 69 DTVSIQEVEIGLKAGFKPKEIIYTPNGVSLSEIKKAIKAGVLINIDNLS-----LLEQIG 123 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 PI R+ P+I +KKIS G KFGI +Q+ ++ K+ G+ M Sbjct: 124 HENPNYPIGIRITPNIIGGGNKKISVGHINSKFGISYYQLPNIKRIVENTGI-KVEGIHM 182 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 H GS I +E F + +L ++ S+ + +++ID G G + YH + Sbjct: 183 HTGSDIIDLEVFLQGADILLNV----ASSFNELKYIDFGSGFKVPYHKNDTKTDLDMLGV 238 Query: 259 LIHQY--FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + KI+ EPG+FLV++ G + KV IK + F +D N F+RP Sbjct: 239 FFKKKISRVCKNIKIVFEPGKFLVSESGYFIVKVNVIKHTTSTVFACVDSGFNHFIRPMF 298 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 YD+YH+I+ + NP+G +VG ICE+ D +N KI R GD+L GAY Sbjct: 299 YDSYHQIDNLSNPSGK--LRSYTVVGYICES-DTFCVNIKINEIREGDILCFRNAGAYCF 355 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 S YNSR E+++ ++ +IR R Q+L++ Sbjct: 356 SMSSNYNSRYRPSEVIIYNNKSFLIRRRENMQDLLK 391 >gi|229827756|ref|ZP_04453825.1| hypothetical protein GCWU000182_03148 [Abiotrophia defectiva ATCC 49176] gi|229787955|gb|EEP24069.1| hypothetical protein GCWU000182_03148 [Abiotrophia defectiva ATCC 49176] Length = 418 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 93/404 (23%), Positives = 146/404 (36%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 + + TPF+ Y I +N AF +A+KA N ++ L G Sbjct: 12 VRETVKTYPTPFHIYDEKGIRENARNLKKAFSWNKGFKEYFAVKATPNPYILSILKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A + E I+FS +E A + G + Sbjct: 72 GTDCSSLTELMMSEACGITGENIMFSSNVTPAEEYVKARELGAIINLDDITHIDFL---- 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G I+ R NP I + K+G+ Q+ + L + Sbjct: 128 KECAGIPEKISCRYNPGGVFKVSNDIMDNPGDAKYGMTKVQMFEAFTRLKELGVKEFGIH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + T+ +I I++ GG+GI Y + Sbjct: 188 SFLVSNTVTNDYYPMLAAELFKLATELKEKCDVHISFINLSGGVGIPYRPEQEANDIFVI 247 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + F I E GRF++A G LVTK + K + + A N Sbjct: 248 GEGVRKAFEEILVPSGMGDVSIFTELGRFMLAPFGHLVTKAVHEKHIYKEYIGVDACAAN 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I + D+ D+ G +CE D A++R + GD L I Sbjct: 308 LM-RPAMYGAYHHITVLGK-EADKAEFKYDVTGSLCENNDKFAIDRMLPKIDMGDYLVIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIM-VNGSQFHIIRPRMTFQELIE 412 TGA+G YN RL E++ + +IR T + Sbjct: 366 DTGAHGFAMGYNYNGRLRSAELLKTENGEVKLIRRAETPMDYFA 409 >gi|322385932|ref|ZP_08059573.1| diaminopimelate decarboxylase [Streptococcus cristatus ATCC 51100] gi|321270047|gb|EFX52966.1| diaminopimelate decarboxylase [Streptococcus cristatus ATCC 51100] Length = 416 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 100/410 (24%), Positives = 165/410 (40%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKT 70 L +L TPF+ Y I AF D +A+KA N A++K Sbjct: 5 FISRERLAELTAQFPTPFHLYDEKGIRARARALHEAFAWNADFKEYFAVKATPNPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + + I+FS +E LA + G Sbjct: 65 LKEEGCGVDCASYVELMMSQKLGFAGDEIMFSSNNTPAEEFRLARELGANINLDA----Y 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + G I+ R NP I +E KFG+ Q+ + L Sbjct: 121 EDVAFLKEVAGIPKVISCRYNPGGVFELGTSIMDHPEEAKFGMTKDQLIQAFKDLKELGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 K + + + A +L + + + G + I++ GG+G+ Y + Sbjct: 181 EKFGIHALLASNTVSNDYYPALARQLFELAVEVVEATGVELDFINLSGGVGVNYQPEGEE 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + Q + + Q KI E GRF++A G+LVTKV K++ +T++ Sbjct: 241 NDIMIIGQGVRQAYEEILTPAGLGQVKIFTELGRFMLAPFGLLVTKVTHKKQT-YRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + +RP +Y AYH I + + D+VG +CE D A+ R++ + + G Sbjct: 300 VDASAVNLLRPAMYGAYHHITNMDRT--EGPTEIVDVVGSLCENNDKFAIQRELPVSQIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 D L I TGA+G YN++L EI++ Q +IR ++ Sbjct: 358 DTLVIHDTGAHGFSMGYQYNAKLRSSEILLEENGQARMIRRAERPEDYFA 407 >gi|91212236|ref|YP_542222.1| diaminopimelate decarboxylase [Escherichia coli UTI89] gi|117625090|ref|YP_854078.1| diaminopimelate decarboxylase [Escherichia coli APEC O1] gi|218559850|ref|YP_002392763.1| diaminopimelate decarboxylase [Escherichia coli S88] gi|237706500|ref|ZP_04536981.1| diaminopimelate decarboxylase [Escherichia sp. 3_2_53FAA] gi|91073810|gb|ABE08691.1| diaminopimelate decarboxylase [Escherichia coli UTI89] gi|115514214|gb|ABJ02289.1| diaminopimelate decarboxylase [Escherichia coli APEC O1] gi|218366619|emb|CAR04373.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli S88] gi|226899540|gb|EEH85799.1| diaminopimelate decarboxylase [Escherichia sp. 3_2_53FAA] gi|294490323|gb|ADE89079.1| diaminopimelate decarboxylase [Escherichia coli IHE3034] gi|307625570|gb|ADN69874.1| diaminopimelate decarboxylase [Escherichia coli UM146] gi|315289397|gb|EFU48792.1| diaminopimelate decarboxylase [Escherichia coli MS 110-3] gi|323951704|gb|EGB47579.1| diaminopimelate decarboxylase [Escherichia coli H252] gi|323957422|gb|EGB53144.1| diaminopimelate decarboxylase [Escherichia coli H263] Length = 420 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 111/416 (26%), Positives = 171/416 (41%), Gaps = 29/416 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + + + + RVNP +K +TG + K GI + + Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245 + I I + ++ + +Q+ G ++Q I GGGL I Y Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVLEFGQDLQAISAGGGLSIPYQQG 235 Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A K+ +EPGRFLVA G+L+T+V S+K+ + F Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHF 295 Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354 V++D ND MRP +Y +YH I + + GP+CE+GD Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 R + + D L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 356 VETRALPEVKACDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411 >gi|240103377|ref|YP_002959686.1| Diaminopimelate decarboxylase (lysA) [Thermococcus gammatolerans EJ3] gi|239910931|gb|ACS33822.1| Diaminopimelate decarboxylase (lysA) [Thermococcus gammatolerans EJ3] Length = 411 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 102/410 (24%), Positives = 175/410 (42%), Gaps = 18/410 (4%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM---VCYAL 59 + L + +LA TP Y Y+ I NYL ++A + YA+ Sbjct: 8 HLRTVGNRLFIGEHDVVELAEKHGTPVYIYNLGRIRDNYLRMTDALKKAGFREWRIHYAM 67 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG- 118 KAN+N+ V+ + LG G+D S GE++ A + I+F+G + +++ ++ Sbjct: 68 KANNNREVLGLIRELGGGIDATSPGEVKLAREIGFEDDDIIFTGTSLSNGDLEFLAKTKV 127 Query: 119 -IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 I ++ S R V L + + S K G I + Sbjct: 128 LINFDSISSLRRFNGEEGRKVGLRINTGVGIGRVEKTTTGGLEAGSIPVKFGISGKAIDR 187 Query: 178 IHSLYAYASTLPGVKISGVDMHI---GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 L G ++ + H+ F LL+ + G +++ I Sbjct: 188 AFDLIEE----KGFELHCLHHHVGSDWVGEKIGRYFQALDNLLKVAEKAEARFGGSVEVI 243 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC---KIILEPGRFLVADVGILVTKVI 291 D+GGG G+ + ++ ++ + ++ K+I+EPG +LV+D GILV +V Sbjct: 244 DLGGGYGVPHSAEEEEFPVYEFFQRVKEHMEEYGFGDLKVIVEPGTYLVSDAGILVAQVN 303 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 ++++ + FV +D +N F P LY+ YHEI N + A +VG ICE+GD Sbjct: 304 TVEEKNGRIFVGVDAGLNVFNSPALYNYYHEIVVC-NRVSSEEKMVATVVGNICESGDIF 362 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHII 401 A++R++ GD + I GAYG V + YN R E++V + I Sbjct: 363 AVDRELPKIEEGDYIAILNAGAYGYVMANNYNLRPKGKEVVV--GRSRSI 410 >gi|257439612|ref|ZP_05615367.1| protein TabA [Faecalibacterium prausnitzii A2-165] gi|257197979|gb|EEU96263.1| protein TabA [Faecalibacterium prausnitzii A2-165] Length = 464 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 93/411 (22%), Positives = 153/411 (37%), Gaps = 13/411 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSG 77 +++ V TPF+ Y I +N + AF +A+KA N +++ L G G Sbjct: 46 QEIIQDVPTPFHVYDEKGIRENARRINKAFSWNKGFREYFAVKALPNPIILQILKEEGCG 105 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D S EL + A I+FS ++++ A + G Y ++ Sbjct: 106 VDCSSLTELMLSEACGFTGSDIMFSSNQTPVEDMKKAYELGAYINLDDATMVDFLDRVAG 165 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKK-EDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + + K + K+G+ Q+ Y Sbjct: 166 IPENIFCRYNPGGTFQLGESEEGFQVMDKPGDAKYGMTEEQMIDSYKKLMAKGAKNFGIH 225 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I A L + + ++ G +I +I++ GG+GI Y D Sbjct: 226 AFLASNTISDAYYPELAGILFQLAVRVQKATGAHIGYINLSGGVGIPYRPDQTENDIMAI 285 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + F I E GRF G LV I K + + A N Sbjct: 286 GEGVRRKFEEILVPAGMGDVAIFTEMGRFTTGPYGALVATAIHEKHIYKEYIGLDACAAN 345 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I + H D+VG +CE D A++R + GDL+YI Sbjct: 346 LM-RPAMYGAYHHITVLGKENAPCDH-KYDVVGGLCENNDKFAIDRMLPKIDIGDLIYIH 403 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE-LDSIPA 418 TGA+G+ YN +L E+++ +IR T ++ LD +PA Sbjct: 404 DTGAHGSAMGYNYNGKLRSAEVLLCEDGSHRLIRRAETPRDYFATLDFLPA 454 >gi|291519892|emb|CBK75113.1| Diaminopimelate decarboxylase [Butyrivibrio fibrisolvens 16/4] Length = 423 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 94/404 (23%), Positives = 160/404 (39%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 ++++ + TPF Y I +N + AF +A+KAN N ++K L G Sbjct: 11 IQEITKEIPTPFNIYDEKGIRENARKVNEAFSWNKGFKEYFAVKANPNPFILKILQEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS E A G+ + Sbjct: 71 GVDCASYVELALSNEIGFKGDDIMFSSNDTPASEYQYADDLGVIVNLDDFTHIDFYEK-- 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 V ++ R NP I + K+G+ QI Y + Sbjct: 129 -VVGHFPKKMSCRYNPGGVYELSNGIMDNPGDSKYGMTKEQIFEAYQILRDKGVEEFGIH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A L + + G ++ +++ GG+GIAY D +P Sbjct: 188 AFLVSNTVTNDYYPALARTLFELIVELKEKTGISLSFVNLSGGVGIAYRPDQKPNDILKI 247 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ F + I+ E GRF++ G LVT I K K ++ +D Sbjct: 248 GEGVHKAFDEILVPAGLGDVAILTEMGRFMMGPYGGLVTTAIHEKHI-YKEYIGVDACAV 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 D MRP +Y +YH + + H+ D+ G +CE D A++R++ GD+L+I Sbjct: 307 DLMRPAIYGSYHHVTVLGKENAPEDHV-YDVTGSLCENCDKFAVDRQLPKIDKGDILFIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ F +IR T ++ + Sbjct: 366 DTGAHGYSMGYNYNGKLKSAEVLLKEDGSFKLIRRPETIKDYLA 409 >gi|170781871|ref|YP_001710203.1| diaminopimelate decarboxylase [Clavibacter michiganensis subsp. sepedonicus] gi|169156439|emb|CAQ01587.1| diaminopimelate decarboxylase [Clavibacter michiganensis subsp. sepedonicus] Length = 499 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 124/453 (27%), Positives = 200/453 (44%), Gaps = 48/453 (10%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYALKA 61 +G++ V +LA TP Y + AF G V YA KA Sbjct: 34 DGAIRIAGVPATELAARFGTPLYVMDEDDVRSRAAETLAAFAREAAAVGTSARVYYAGKA 93 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + V + + G +D+ S GEL ALAA R+ F G K++ EID A+ +GI Sbjct: 94 FLSIEVARWMVEEGLHIDVCSGGELAVALAAGADPARLGFHGNNKSVAEIDRAVGAGIGQ 153 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V+S E++ + A + G+ P+ RVN ++A+TH+ ++T +++ KFGI + + Sbjct: 154 IVVDSRVEVERIAAAAAAHGRVQPVRLRVNSGVHAHTHEYLATAREDQKFGITLQDAPGV 213 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A + + +G+ HIGSQI + ++F ++ + L DL ++L ++G + +++GGG G Sbjct: 214 VARIRSHASLSFTGLHAHIGSQIFETDAFVESARRLLDLHERLLADGPVPE-LNLGGGFG 272 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK 294 IAY S RP + A + + G+ I +EPGR +V + V ++K Sbjct: 273 IAYTSVDRPVPVPEIARRLARIVGDECGRRGIPAPVIAVEPGRSIVGPSTATLYAVGTVK 332 Query: 295 K--------------------------------SADKTFVILDVAMNDFMRPTLYDAYHE 322 +A + +V +D M+D RP LY A + Sbjct: 333 DVLVTVGGVDGEVAEASSATGDVEDARVAEEAETAVRRYVSVDGGMSDNARPALYGADY- 391 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGT 381 I A D I G CE+GD + L + RP DLL + TGAY + Sbjct: 392 SVRIAGRASDADPALVRIAGKHCESGDLVVLADYLPGDVRPHDLLAVPATGAYCWALASN 451 Query: 382 YNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 YN P + V + +I T +L+ D Sbjct: 452 YNWIGRPPVVAVRDGEARVIVRGETEADLLARD 484 >gi|291550060|emb|CBL26322.1| Diaminopimelate decarboxylase [Ruminococcus torques L2-14] Length = 423 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 93/404 (23%), Positives = 150/404 (37%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 +E++ TPF+ Y I +N AF +A+KA N +++ L G Sbjct: 12 VEEIVKTYPTPFHLYDEKGIRENAKALKEAFAWNPGYKEYFAVKATPNPFLLQILKEYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A + I+FS ++ LA + G + Sbjct: 72 GCDCSSYTELLMSDAVGIDGHDIMFSSNDTPEEDFKLADKLGAIINLDDITHIDFLEKTI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ QI + + Sbjct: 132 GHIPE---TISCRYNPGGIFKISNDIMDNPGDSKYGMTTEQITEAFKTLKAKGAKEFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + + G +I+ I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNDYYPMLAKVLFEQAVRLQKETGVHIKFINLSGGIGIPYTPDQEPNDIRVI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++ G LVTK I K + K ++ +D Sbjct: 249 GEGVRKVYEEVLVPAGMGDVAIYTELGRFMMGPYGCLVTKAIHEKNT-YKNYIGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H D+ G +CE D A++R + GD L I Sbjct: 308 NLMRPAMYGAYHHITVLGKEDAPCDH-KYDVTGSLCENNDKFAIDRMLPEVDMGDYLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T ++ Sbjct: 367 DTGAHGFSMGYNYNGKLKSAELLLKEDGSVQMIRRAETPKDYFA 410 >gi|225570699|ref|ZP_03779722.1| hypothetical protein CLOHYLEM_06799 [Clostridium hylemonae DSM 15053] gi|225160526|gb|EEG73145.1| hypothetical protein CLOHYLEM_06799 [Clostridium hylemonae DSM 15053] Length = 425 Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 153/404 (37%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N +AF +A+KA N +I L G Sbjct: 12 LDEIIKDYPTPFHLYDEKGIRRNMQALRDAFSWNKGYKEYFAVKATPNPYLIDILREYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A + I+FS +E A + G + Sbjct: 72 GCDCSSYTELMLSEAVGATGDDIMFSSNDTPAEEFIYAEKLGAIINLDDITHIEFLEETI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ Q+ + + + Sbjct: 132 GYIPK---TISCRYNPGGLFKISNDIMDNPGDSKYGMTTEQLFEAFKILKSKGAEEFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + + + G +I+ I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNEYYPMLAKILFEEAVRLQKETGVHIKFINLSGGIGIPYTPDQEPNDIRII 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + +I E GRF++ G LVT+ I K + K ++ +D Sbjct: 249 GDGVRRVYEEVLVPAGMGDVEIYTELGRFMLGPYGCLVTEAIHEKHT-HKEYIGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH + + H D+VG +CE D A++R + GD+L I Sbjct: 308 NLMRPAMYGAYHHVTVMGREDCPCDH-KYDVVGSLCENNDKFAIDRMLPKVEMGDILVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T + Sbjct: 367 DTGAHGFSMGYNYNGKLKSAELLLKEDGSAQLIRRAETPADYFA 410 >gi|240169895|ref|ZP_04748554.1| LysA_1 [Mycobacterium kansasii ATCC 12478] Length = 446 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 92/420 (21%), Positives = 158/420 (37%), Gaps = 16/420 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L V L +A TP Y T + D V YA K+ A Sbjct: 31 EDGRLCTGGVPLADIADEFGTPAYVIDETDFRHRARRYRAVLR--DVEVVYAGKSLLTTA 88 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 V + G G+ + S GEL ALA V R+V G + DE+ A+ G+ ++S Sbjct: 89 VARWAREEGLGIGVCSPGELAVALAGGVDPSRMVMHGNATSPDELRDAVAVGVGRLVLDS 148 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHSLYAY 184 + L + + RV PD++ + H+ ++TG + G + Sbjct: 149 SLGIAYLA---GLARWRQRVLIRVTPDVDVHGHRAVTTGISDPTCGFTLTGGHAADAVRA 205 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIA 243 P + + G+ +G Q+ + +A + L +R +G + +++GGG + Sbjct: 206 VLAHPILDLIGLHCQLGPQVSDPARYGEAIRRLIAAMADIRAHHGVILTELNIGGGHAVP 265 Query: 244 YHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 Y ++ A + +++EPGR + A G+ + +V S+K Sbjct: 266 YLRGDPELDLAELAGVIEDALDEACAAEHFPRPAVVVEPGRAISARAGVTLYRVCSVKTR 325 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + V+ D + N G + + G C GD IA N + Sbjct: 326 PNGHTVVAVDGGRSDNPRVALDGAQYTVALANRHGLGVKRSVTVAGRHCGAGDEIARNVE 385 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GDLL + TG+Y + Y P + VNG + + R T +L+ D Sbjct: 386 LPSDIHAGDLLAVACTGSYHHSMASNYTMVGRPPLVAVNGGRARELVRRETIADLLSRDC 445 >gi|153814493|ref|ZP_01967161.1| hypothetical protein RUMTOR_00707 [Ruminococcus torques ATCC 27756] gi|317500535|ref|ZP_07958757.1| diaminopimelate decarboxylase [Lachnospiraceae bacterium 8_1_57FAA] gi|331089366|ref|ZP_08338266.1| hypothetical protein HMPREF1025_01849 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847987|gb|EDK24905.1| hypothetical protein RUMTOR_00707 [Ruminococcus torques ATCC 27756] gi|316898045|gb|EFV20094.1| diaminopimelate decarboxylase [Lachnospiraceae bacterium 8_1_57FAA] gi|330405429|gb|EGG84964.1| hypothetical protein HMPREF1025_01849 [Lachnospiraceae bacterium 3_1_46FAA] Length = 424 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 97/414 (23%), Positives = 153/414 (36%), Gaps = 14/414 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQA 66 + +EK+ + TPF+ Y I +N AF +A+KA N Sbjct: 2 DKRPFVTKEKVEKITKIYPTPFHLYDEKGIRENVKALKEAFSWNKGYKEYFAVKATPNPF 61 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I L G G D S EL + A + E I+FS +E A + G + Sbjct: 62 LIDILKEYGCGCDCSSYTELMMSEALEITGEDIMFSSNDTPAEEFIYADKLGAIINLDDI 121 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 I+ R NP I + K+G+ QI Y Sbjct: 122 THIDFLEQAIGHVPE---TISCRFNPGGLFKISNDIMDNPGDAKYGMTPEQILEAYKILK 178 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + + + + A L + + G +I+ I++ GG+GI Y Sbjct: 179 SKGAKEFGLHAFLASNTVTNDYYPMLAKVLFEQAVKLSKEAGVHIKFINLSGGIGIPYKP 238 Query: 247 DHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 D P + + + I E GR+++ G LVTK I K + K Sbjct: 239 DQEPNDIYAIGEGVRKVYEEVLVPAGMGDVAIYTELGRYMMGPYGCLVTKAIHEKNT-YK 297 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 ++ +D + MRP +Y AYH I + H D+ G +CE D A++R + L Sbjct: 298 NYIGVDACAVNLMRPAMYGAYHHITVLGKEDEPCDH-KYDVTGSLCENNDKFAVDRMLPL 356 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GD L I TGA+G YN +L E+++ + +IR T + Sbjct: 357 IERGDYLVIHDTGAHGFAMGYNYNGKLKSAELLLKENGEVKLIRRAETPADYFS 410 >gi|291561245|emb|CBL40044.1| Diaminopimelate decarboxylase [butyrate-producing bacterium SS3/4] Length = 424 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 152/404 (37%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++A TPFY Y I +N L AF +A+KA N ++K L LG Sbjct: 12 LEEIAKTYPTPFYLYDEKGIRENALKLKEAFSWNKGFREYFAVKATPNPFILKILQELGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S+ EL + A I+FS +E LA G + Sbjct: 72 GTDCSSKTELLMSDACGFSGHDIMFSSNDTPPEEFKLAYDLGAIINLDDFTHIECLEK-- 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I R NP I + K+G+ QI Y Sbjct: 130 -TIGTIPETICCRFNPGGLFKVATDIMDNPGDAKYGMTEAQITEAYKILKAKGAKNFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + + G +I+ I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNEYYPILAKILFELAVKLKKETGADIKFINLSGGIGIPYRPDQEPNDIKVI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++A G LVT+ I K + K ++ +D Sbjct: 249 GESVRKVYEEVLVPAGMGDVAIFTELGRFMLAPYGALVTRAIHEKHT-YKEYIGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + + D+ G +CE D A++R + GDLL+I Sbjct: 308 NLMRPAMYGAYHHITVMGK-ENEPCDHKYDVTGSLCENNDKFAIDRMLPKIDKGDLLFIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+G YN +L E+++ +IR T ++ Sbjct: 367 DAGAHGFAMGYNYNGKLKSAELLLKEDGSVQMIRRAETPKDYFA 410 >gi|284992534|ref|YP_003411088.1| diaminopimelate decarboxylase [Geodermatophilus obscurus DSM 43160] gi|284065779|gb|ADB76717.1| diaminopimelate decarboxylase [Geodermatophilus obscurus DSM 43160] Length = 496 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 120/434 (27%), Positives = 184/434 (42%), Gaps = 28/434 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G LH + +LA TP + A D V YA KA + Sbjct: 42 DGELHLGGRPVTELARTHGTPLFVLDEGDFRSRAAD--FAAAFTDADVHYASKAFLCGQI 99 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G LD S EL ALAA PA RI G K++ E+ LA+ +GI ++S Sbjct: 100 ARWIADDGLHLDACSGNELALALAAGFPAGRIALHGNNKSLVELQLAVDAGIGHVVLDSF 159 Query: 128 SELKTL----NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 E+ L R + G P+ R I A+TH+ I+T ++ KFG + +L A Sbjct: 160 DEVDRLVPLAAARVAAGGAPVPVLIRTTVGIEAHTHEFIATAHEDQKFGFSLATGDALTA 219 Query: 184 --YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGL 240 P ++++G+ HIGSQI F A + L Q+R + +++GGG Sbjct: 220 AVRVIREPALRLTGLHSHIGSQIFDTAGFEAAAHRVVGLLGQVRQATGEVLGELNLGGGF 279 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISI 293 GIAY P S D A + ++ +EPGR + + + ++ +I Sbjct: 280 GIAYLPGDDPVSPGDVARRLRSAVAAECDALGLPVPRLAVEPGRAIAGPGTVTLYEIGTI 339 Query: 294 KK----------SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 K + +V +D M+D +R LYDA + N D +VG Sbjct: 340 KPVRLGSGGQGAPQVRNYVSVDGGMSDNIRTALYDASYTCVL-ANRESDAPPALCRVVGK 398 Query: 344 ICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIR 402 CE+GD + + + +PGDLL + TGAY + YN L P + V I Sbjct: 399 HCESGDILVRDLWLPADVQPGDLLAVAATGAYCWSMASNYNYLLKPPVVAVRDGAATEIV 458 Query: 403 PRMTFQELIELDSI 416 R T ++ LD++ Sbjct: 459 RRQTLSDVFALDAV 472 >gi|197303210|ref|ZP_03168252.1| hypothetical protein RUMLAC_01933 [Ruminococcus lactaris ATCC 29176] gi|197297750|gb|EDY32308.1| hypothetical protein RUMLAC_01933 [Ruminococcus lactaris ATCC 29176] Length = 423 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 93/404 (23%), Positives = 149/404 (36%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 +E++ TPF+ Y I N AF +A+KA N ++ L G Sbjct: 12 VEEIVKTYPTPFHLYDEKGIRANAKALKEAFSWNPGYKEYFAVKATPNPFLLDILKEYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A V I+FS ++ LA + G + + Sbjct: 72 GCDCSSYTELMLSEAVGVTGHNIMFSSNDTPAEDFRLADKLGAIINLDDISHIEFLESAI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ QI + + + Sbjct: 132 GHIPE---TISCRYNPGGLFKISNDIMDNPGDAKYGMTTEQITEAFKILKSKGAKEFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G NI+ I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNDYYPMLAKVLFEQAVRLKNETGANIKFINLSGGIGIPYRPDQEPNDIYAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GR+++ G LVTK I KK+ K ++ +D Sbjct: 249 GEGVRKVYEEVLVPAGMGDVAIFTELGRYMMGPYGCLVTKAIHEKKT-YKDYIGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + + D+ G +CE D A++R + GD L I Sbjct: 308 NLMRPAMYGAYHHITVLGK-ENEPCDHKYDVTGSLCENNDKFAIDRMLPEIERGDYLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+G YN +L E+++ +IR T ++ Sbjct: 367 DAGAHGFSMGYNYNGKLKSAELLLKEDGSVQMIRRAETPKDYFA 410 >gi|328947721|ref|YP_004365058.1| Diaminopimelate decarboxylase [Treponema succinifaciens DSM 2489] gi|328448045|gb|AEB13761.1| Diaminopimelate decarboxylase [Treponema succinifaciens DSM 2489] Length = 422 Score = 215 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 102/404 (25%), Positives = 158/404 (39%), Gaps = 13/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV-CYALKANSNQAVIKTLAHLGS 76 L +LA TPFY Y AI +N F AF + +A+KA N ++K L G Sbjct: 12 LVELAKKFPTPFYIYDEKAIRENVKYFYKAFSIFPSFTEYFAVKALPNPYILKVLESEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + + RI+F+ E A + G + + Sbjct: 72 GGDCSSLPELMLCEKSGITGRRIMFTSNDTPAQEFVYAQKLGAIINLDDITHIDFL--KN 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A+ I FR NP I +E K+G+ Q+ Y Sbjct: 130 ALGGKLPDTICFRYNPGPLKEGGNSIIGKPEEAKYGLTKEQMIHAYKICKAEGVKHFGIH 189 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M ++++ A + + + + G NI+ D+GGG+GI Y + Sbjct: 190 TMVASNELNPDFFVDTARIVFELILEVQKECGVNIEFADIGGGVGIPYRPGQKKVDLDYV 249 Query: 257 ASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 A I + + + E GR + G LVTK I K + ++ +D +M Sbjct: 250 AKGIKVLYDKMIVPAGLDPLKLCFECGRPITGPYGWLVTKAIHEKNI-YRNYIGVDASMA 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 D MRP +Y AYHE+ + ++ D+ G +CE D A+ R + GDLL I Sbjct: 309 DLMRPGMYGAYHEVTVSGKENAPKDYV-YDVSGSLCENCDKFAVQRNLPKIEMGDLLIIH 367 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 GA+G YN +L E+++ IR R T ++ Sbjct: 368 DAGAHGRAMGFNYNGKLRAGELLLRSDGTVKEIRRRETIEDYFA 411 >gi|307710846|ref|ZP_07647273.1| protein tabA [Streptococcus mitis SK321] gi|307617291|gb|EFN96464.1| protein tabA [Streptococcus mitis SK321] Length = 416 Score = 215 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 102/410 (24%), Positives = 162/410 (39%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LEK+ TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINKEDLEKIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + P I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V KK+ +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKT-YRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHITNVTH--PDGPAEVVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|269216542|ref|ZP_06160396.1| diaminopimelate decarboxylase [Slackia exigua ATCC 700122] gi|269130071|gb|EEZ61153.1| diaminopimelate decarboxylase [Slackia exigua ATCC 700122] Length = 475 Score = 215 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 109/445 (24%), Positives = 165/445 (37%), Gaps = 29/445 (6%) Query: 1 MSAFKYFEGSL--------HAENVS------LEKLAHVVQTPFYCYSTTAIEKNYLTFSN 46 M++F + +G L E V E +A TPF+ Y I +N + Sbjct: 32 MASFDFRQGILPRRFTRRTCMEKVPFISRDEAEAIAACYPTPFHLYDEAGIRRNIESLVR 91 Query: 47 AFDG-MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVG 105 AF +A+KA N +I+ L G G D S EL A A I+FS Sbjct: 92 AFSWNPGFREYFAVKATPNPFIIEILQEYGCGCDCSSYAELVLADACGAHGSDIMFSSNE 151 Query: 106 KTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 ++ LA Q G + + V I+ R NP I Sbjct: 152 TPEEDFRLASQLGATINLDDITHIDVLES---VIGRIPKTISCRYNPGGTFEVANGIMDN 208 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + K+G+ Q + + + + A L + R Sbjct: 209 PGDAKYGMTDDQFIEAFRILKAKGAKEFGIHAFLASNTVTNEYYPKLAGILFDVAVRVAR 268 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRF 278 +I I++ GG+GI Y D P + + F + E GRF Sbjct: 269 EADVHIGFINLSGGIGIPYTPDQEPNDIEAIGEGVRRKFEDILVPAGMGDVALFTELGRF 328 Query: 279 LVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 + G L+T+ I +K K ++ +D + MRP +Y AYH I + A +R H Sbjct: 329 VTGPYGCLITRAI-REKHTYKDYIGVDACAANLMRPAIYGAYHHITVLGKEAAERDH-TY 386 Query: 339 DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQ 397 DIVG +CE D A++R + GDLL I GA+G YN RL E+++ Sbjct: 387 DIVGGLCENNDKFAVDRALPRIDRGDLLVIHDAGAHGHAMGYNYNGRLRSAELLLRPDGS 446 Query: 398 FHIIRPRMTFQELIE-LDSIPAWLQ 421 +IR T Q+ LD + + Sbjct: 447 VKLIRRAETTQDYFATLDCFDEFKR 471 >gi|189462467|ref|ZP_03011252.1| hypothetical protein BACCOP_03156 [Bacteroides coprocola DSM 17136] gi|189430628|gb|EDU99612.1| hypothetical protein BACCOP_03156 [Bacteroides coprocola DSM 17136] Length = 386 Score = 215 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 140/370 (37%), Positives = 198/370 (53%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y + A V YA+KAN+N V+ + G G D V Sbjct: 11 RELETPFYYYDANLLRDTLNVIRTEAAKYNKFCVHYAIKANANPKVLSIIREHGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+ A+ A PA +IV++GVGKT EI+L L I+CFNVES EL+ +N+ A + G Sbjct: 71 SGGEIAAAIKAGFPASKIVYAGVGKTDREINLGLDHDIFCFNVESVPELEVINELAAAKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KIARVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDRALEMNNVKFVGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS---SDYAS 258 SQI + F + DL ++L + ++HI+VGGGLGI Y +R P +A+ Sbjct: 191 SQILDMGDFVALCNRINDLQEKLYARQIIVEHINVGGGLGIDYAHPNRQPIPDFADYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L+TKVI +K+ +K F I+D M D +RP LY Sbjct: 251 YHKHLKLRPQQTLHFELGRSVVGQCGSLITKVIYVKQGTNKQFAIVDGGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH I N + + D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AYH---KIENITSEEPNETYDVVGPICESSDVFGKAIDLNRVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRTLP 377 >gi|298481756|ref|ZP_06999946.1| diaminopimelate decarboxylase [Bacteroides sp. D22] gi|298271978|gb|EFI13549.1| diaminopimelate decarboxylase [Bacteroides sp. D22] Length = 386 Score = 215 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 136/370 (36%), Positives = 197/370 (53%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 +QTPFY Y T + + V YA+KAN+N V+ + G G D V Sbjct: 11 RTLQTPFYYYDTKVLRDTLSAINQEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA+++VF+GVGK EI+L L+ GI+CFNVES EL+ +N+ A + Sbjct: 71 SGGEIRAAIRAGFPADKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQN 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KIANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP---PSSSDYAS 258 SQI + F + +L +L + ++HI+VGGGLGI Y +R +A+ Sbjct: 191 SQILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAVPNFKDYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L++KV+ +K+ K F ILD M D +RP LY Sbjct: 251 YAGQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H + N + D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AFH---KMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRELP 377 >gi|301311439|ref|ZP_07217366.1| diaminopimelate decarboxylase [Bacteroides sp. 20_3] gi|300830525|gb|EFK61168.1| diaminopimelate decarboxylase [Bacteroides sp. 20_3] Length = 386 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 136/369 (36%), Positives = 207/369 (56%), Gaps = 6/369 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TPFY Y ++ V YA+KAN+N ++ +A G G D VS Sbjct: 12 KQLSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIAANGLGADCVS 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GE++ AL A PA++IVF+GVGK EI+L L + I+CFNVES EL+ +N+ A + K Sbjct: 72 GGEVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELEIINELAATKNK 131 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 A IA R+NP+++A+TH KI+TG KE+KFGI + Q+ + + VK+ G+ HIGS Sbjct: 132 VASIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKNVKLIGIHSHIGS 191 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR---PPSSSDYASL 259 QI + SF ++ ++L ++G +++++ GGGLGI Y+ + P + +A++ Sbjct: 192 QITDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAI 251 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 ++ EPGR +VA G L++KV+ +K+ K F ILD + +RP +YDA Sbjct: 252 HKLLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDA 311 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 YH I N + D D+VGPICE+ D + ++ GDL+ + GAYG V + Sbjct: 312 YHRIE---NISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMA 368 Query: 380 GTYNSRLLI 388 YN R L Sbjct: 369 SQYNCRHLP 377 >gi|237715165|ref|ZP_04545646.1| diaminopimelate decarboxylase [Bacteroides sp. D1] gi|262408884|ref|ZP_06085429.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_22] gi|294644345|ref|ZP_06722111.1| diaminopimelate decarboxylase [Bacteroides ovatus SD CC 2a] gi|294810703|ref|ZP_06769351.1| diaminopimelate decarboxylase [Bacteroides xylanisolvens SD CC 1b] gi|229444998|gb|EEO50789.1| diaminopimelate decarboxylase [Bacteroides sp. D1] gi|262353095|gb|EEZ02190.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_22] gi|292640315|gb|EFF58567.1| diaminopimelate decarboxylase [Bacteroides ovatus SD CC 2a] gi|294442036|gb|EFG10855.1| diaminopimelate decarboxylase [Bacteroides xylanisolvens SD CC 1b] Length = 386 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 132/370 (35%), Positives = 193/370 (52%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 +QTPFY Y T + + V YA+KAN+N V+ + G G D V Sbjct: 11 RTLQTPFYYYDTKVLRDTLSAINQEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA+++VF+GVGK EI+L L+ GI+CFNVES EL+ +N+ A + Sbjct: 71 SGGEIRAAIRAGFPADKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQN 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KVANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSSDYAS 258 SQI + F + +L +L + ++HI+VGGG + P +A+ Sbjct: 191 SQILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L++KV+ +K+ K F ILD M D +RP LY Sbjct: 251 YAGQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H + N + D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AFH---KMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRELP 377 >gi|262383506|ref|ZP_06076642.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_33B] gi|262294404|gb|EEY82336.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_33B] Length = 386 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 137/369 (37%), Positives = 208/369 (56%), Gaps = 6/369 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TPFY Y ++ V YA+KAN+N ++ +A G G D VS Sbjct: 12 KQLSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIAANGLGADCVS 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GE++ AL A PA++IVF+GVGK EI+L L + I+CFNVES EL+ +N+ AV+ K Sbjct: 72 GGEVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELEIINELAVAKNK 131 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 A IA R+NP+++A+TH KI+TG KE+KFGI + Q+ + + VK+ G+ HIGS Sbjct: 132 VASIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKNVKLIGIHSHIGS 191 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR---PPSSSDYASL 259 QI + SF ++ ++L ++G +++++ GGGLGI Y+ + P + +A++ Sbjct: 192 QITDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAI 251 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 ++ EPGR +VA G L++KV+ +K+ K F ILD + +RP +YDA Sbjct: 252 HKLLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDA 311 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 YH I N + D D+VGPICE+ D + ++ GDL+ + GAYG V + Sbjct: 312 YHRIE---NISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMA 368 Query: 380 GTYNSRLLI 388 YN R L Sbjct: 369 SQYNCRHLP 377 >gi|210612474|ref|ZP_03289332.1| hypothetical protein CLONEX_01533 [Clostridium nexile DSM 1787] gi|210151582|gb|EEA82589.1| hypothetical protein CLONEX_01533 [Clostridium nexile DSM 1787] Length = 428 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 95/414 (22%), Positives = 148/414 (35%), Gaps = 14/414 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQA 66 L+++ TPF+ Y I +N AF +A+KA N Sbjct: 8 NKVPFVTKEKLDEIVKEFPTPFHLYDERGIRENVKALKEAFAWNKGYKEYFAVKATPNPF 67 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I L G G D S EL + A + I+FS +E A + G + Sbjct: 68 LINILREYGCGCDCSSYTELMLSEALGAVGKDIMFSSNATPAEEFVYADKLGAIINLDDF 127 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 N I+ R NP I + K+G+ Q+ + Sbjct: 128 THIEFLENAIGHIPE---TISCRYNPGGLFKISNDIMDNPGDAKYGMTTEQLFEAFKILK 184 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + + + A L + + G +I+ I++ GG+GI Y Sbjct: 185 AKGAKEFGLHAFLASNTVTNEYYPMLAKILFEVAVKLQKETGAHIKFINLSGGIGIPYRP 244 Query: 247 DHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 D P + + + I E GR+++ G LVTK + K + K Sbjct: 245 DQEPNDIRAIGEGVRKVYEEVLVPAGMGDVAIYTELGRYMMGPYGCLVTKAVHEKHT-YK 303 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 ++ D + MRP +Y AYH I + H DI G +CE D A++R + Sbjct: 304 EYIGCDACAVNLMRPAMYGAYHHITVMGKEDAPCDH-KYDITGSLCENNDKFAVDRMLPK 362 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GDLL I TGA+G YN +L EI++ +IR T + Sbjct: 363 IDIGDLLVIHDTGAHGFAMGYNYNGKLKSAEILLQEDGTPKLIRRAETPADYFA 416 >gi|262163683|ref|ZP_06031424.1| diaminopimelate decarboxylase [Vibrio mimicus VM223] gi|262027899|gb|EEY46563.1| diaminopimelate decarboxylase [Vibrio mimicus VM223] Length = 343 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 151/345 (43%), Positives = 211/345 (61%), Gaps = 4/345 (1%) Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 GSG DIVS GEL R LAA ++VFSGVGKT E+ ALQ I CFNVESE EL LN Sbjct: 2 GSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESERELHRLN 61 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + A LG KAPI+ R+NPD++A TH ISTG +++KFGI + +Y A +L + + Sbjct: 62 KVAAELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAEVYRLAHSLSNLDVH 121 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+D HIGSQ+ + F A L L L++ G +I+H+DVGGGLG+ Y + P S Sbjct: 122 GIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSE 181 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 +L+ + + ++I EPGR + A+ G+LVTKV +K + K F I+D AMND +RP Sbjct: 182 YAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRP 241 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 LY A+ +I + G+ D+VGP+CET DF+ +R + + GDLL + +GAY Sbjct: 242 ALYQAWQDIIPLRPRQGEA--QTYDLVGPVCETSDFLGKDRDL-VLEEGDLLAVRSSGAY 298 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418 G S YNSR + E+MV+G++ H++R R T L L+ +P Sbjct: 299 GFTMSSNYNSRPRVAEVMVDGNKAHLVRQRETLSSLWALESVLPE 343 >gi|257389205|ref|YP_003178978.1| diaminopimelate decarboxylase [Halomicrobium mukohataei DSM 12286] gi|257171512|gb|ACV49271.1| diaminopimelate decarboxylase [Halomicrobium mukohataei DSM 12286] Length = 413 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 106/398 (26%), Positives = 184/398 (46%), Gaps = 7/398 (1%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +LA TP Y + NY F+ AF D V YA KA++ +AV+ L G+ Sbjct: 18 RLARLAEEHGTPLYVLDVDRVAANYRRFAAAFP--DAHVMYAAKAHTGRAVLSGLLEAGA 75 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 ++ + GEL+RA+ A + ++ V ++D A+ + + R Sbjct: 76 DIECAAAGELQRAIDAGADPNTLQYTAVNPPGGDLDYAVDLADEHPGLTITGGAEDTFDR 135 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G +A R+NP I H+K+ K+ KFGIP ++ +L + G+ Sbjct: 136 LEDRGYDGRVAIRINPGIGTGHHEKV-ATGKDAKFGIPYDEVPALADDL--RDRFDLVGL 192 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H GS + + + + + +++ +D GGG G+ Y + P Sbjct: 193 HAHAGSGVLREDLDDHCRAIAKVAELAREVGDSDLEFVDFGGGFGVPYREETEPLDMQAV 252 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + + G+L +I LEPGR++VAD +++T V ++K++ T V +D ++ +RP + Sbjct: 253 GERVREAVGDLSARIKLEPGRYVVADAELILTTVNTVKETPATTVVGVDASLATLIRPAM 312 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 +D+YH I + A DR I GP C + D A +R IA P DLL I GAYG Sbjct: 313 FDSYHPIRNVS--APDRDPHPVSIGGPCCTSADVFATDRPIARPERTDLLAIGNAGAYGY 370 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + ++S+ E+ + ++R R T +++ ++ Sbjct: 371 ELANQFHSQPRPAEVAIEDGDERVVRRRETMADVVRVE 408 >gi|256841336|ref|ZP_05546843.1| diaminopimelate decarboxylase [Parabacteroides sp. D13] gi|256737179|gb|EEU50506.1| diaminopimelate decarboxylase [Parabacteroides sp. D13] Length = 386 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 136/369 (36%), Positives = 207/369 (56%), Gaps = 6/369 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TPFY Y ++ V YA+KAN+N ++ +A G G D VS Sbjct: 12 KQLSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIAANGLGADCVS 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GE++ AL A PA++IVF+GVGK EI+L L + I+CFNVES EL+ +N+ A + K Sbjct: 72 GGEVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELEIINELAAAKNK 131 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 A IA R+NP+++A+TH KI+TG KE+KFGI + Q+ + + VK+ G+ HIGS Sbjct: 132 VASIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKNVKLIGIHSHIGS 191 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR---PPSSSDYASL 259 QI + SF ++ ++L ++G +++++ GGGLGI Y+ + P + +A++ Sbjct: 192 QITDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAI 251 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 ++ EPGR +VA G L++KV+ +K+ K F ILD + +RP +YDA Sbjct: 252 HKLLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDA 311 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 YH I N + D D+VGPICE+ D + ++ GDL+ + GAYG V + Sbjct: 312 YHRIE---NISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMA 368 Query: 380 GTYNSRLLI 388 YN R L Sbjct: 369 SQYNCRHLP 377 >gi|302385100|ref|YP_003820922.1| Orn/DAP/Arg decarboxylase 2 [Clostridium saccharolyticum WM1] gi|302195728|gb|ADL03299.1| Orn/DAP/Arg decarboxylase 2 [Clostridium saccharolyticum WM1] Length = 423 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 93/405 (22%), Positives = 150/405 (37%), Gaps = 14/405 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLG 75 LE++ TPF+ Y I +N +AF +A+KA N ++ L G Sbjct: 11 RLEEIVKEYPTPFHLYDEKGIRENARKLKDAFSWNKGYREYFAVKATPNPFILNILKDYG 70 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G D S EL + + I+FS +E A + G + Sbjct: 71 CGADCSSMTELMMSDSLGFSGSDIMFSSNNTPAEEFQYADKIGGIINLDDITHIEYLKKA 130 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 I+ R NP I + K+G+ Q+ + + Sbjct: 131 IGHIPE---TISCRYNPGGIFKISNDIMDNPGDSKYGMTTEQMFEAFRILKSNGAKHFGI 187 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + + A L + + G +I I++ GG+GI Y P Sbjct: 188 HAFLASNTVTNEYYPLLAKVLFELAVKLKKETGAHISFINLSGGIGIPYRPGQEPNDIKA 247 Query: 256 YASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + + + I E GRF++ G LVT+ I K + K +V +D Sbjct: 248 IGEGVREVYEEILVPEGMGDVAIYTELGRFMLGPYGGLVTRAIHEKHT-HKEYVGVDACA 306 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 + MRP +Y AYH I + G+ D+VG +CE D A++R + GDLL+I Sbjct: 307 VNLMRPAMYGAYHHITVMGK-EGEVCSHKYDVVGSLCENNDKFAIDRMLPEISRGDLLFI 365 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T ++ Sbjct: 366 HDTGAHGYAMGYNYNGKLKSAELLLKEDGSVQMIRRAETPRDYFA 410 >gi|148272332|ref|YP_001221893.1| hypothetical protein CMM_1152 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830262|emb|CAN01196.1| lysA [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 499 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 121/454 (26%), Positives = 197/454 (43%), Gaps = 48/454 (10%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYALK 60 +G++ V +LA TP Y + AF G V YA K Sbjct: 33 EDGAIRIAGVPATELATRFGTPLYVMDEDDVRGRAAETLAAFTREAAAVGTSARVYYAGK 92 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A + V + + G +D+ S GEL ALA R+ F G K++ EID A+ +GI Sbjct: 93 AFLSIEVARWMVEEGLHIDVCSGGELAVALAGGADPARLGFHGNNKSVAEIDRAVGAGIG 152 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 V+S E++ + A + G+ P+ RVN ++A+TH+ ++T +++ KFGI + Sbjct: 153 QIVVDSAIEVERVAAAAAAHGRVQPVRLRVNSGVHAHTHEYLATAREDQKFGITLADAPG 212 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L A + + +G+ HIGSQI + ++F ++ + L DL ++L ++G + +++GGG Sbjct: 213 LVARIRSHATLSFTGLHAHIGSQIFETDAFVESARRLLDLHERLLADGPVPE-LNLGGGF 271 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISI 293 GIAY S RP + A + G+ I +EPGR +V + + V ++ Sbjct: 272 GIAYTSVDRPVPVPEIARRLAHIVGDECGRRGISVPVIAVEPGRSIVGPSTVTLYTVGTV 331 Query: 294 KK--------------------------------SADKTFVILDVAMNDFMRPTLYDAYH 321 K +A + +V +D M+D RP LY A + Sbjct: 332 KDVLVTVGGVDGEVAEASSATGDVEDPRVAEEAETAVRRYVSVDGGMSDNARPALYGADY 391 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSG 380 I A I G CE+GD + L + R DL+ + TGAY + Sbjct: 392 -SVRIAGRASAADPALVRIAGKHCESGDLVVLADYLPGDVRADDLVAVPATGAYCWALAS 450 Query: 381 TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 YN P + V + +I T +L+ D Sbjct: 451 NYNWIGRPPVVAVRDGEARVIVRGETEADLLARD 484 >gi|313113931|ref|ZP_07799489.1| putative diaminopimelate decarboxylase [Faecalibacterium cf. prausnitzii KLE1255] gi|310623770|gb|EFQ07167.1| putative diaminopimelate decarboxylase [Faecalibacterium cf. prausnitzii KLE1255] Length = 428 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 90/410 (21%), Positives = 153/410 (37%), Gaps = 13/410 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSG 77 +++ V TPF+ Y I +N + AF +A+KA N +++ L G G Sbjct: 13 QEIIQDVPTPFHVYDEKGIRENARRINKAFSWNKGFKEYFAVKALPNPVILQILKEEGCG 72 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D S EL + I+FS ++++ A + G Y ++ Sbjct: 73 VDCSSLTELMLSEVCGFSGSEIMFSSNQTPVEDMKKAYELGSYINLDDATMVEFLERVAG 132 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKK-EDKFGIPIHQIHSLYAYASTLPGVKISGV 196 V + + K + K+G+ Q+ Y + Sbjct: 133 VPENIFCRYNPGGTFSLGESEEGFQVMDKPGDAKYGMTEEQMIESYKKLAAKGAKNFGIH 192 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I A L + + ++ G +I +I++ GG+GI Y + Sbjct: 193 AFLASNTISDEYYPELAGILFQLAVRVQKATGVHIGYINLSGGVGIPYRPEQTENDIMAI 252 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + F I E GRF G LV I K + + A N Sbjct: 253 GEGVRKKFEEILVPAGMGDVAIFTEMGRFTTGPYGALVATAIHEKHIYKEYIGLDACAAN 312 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I + H+ D+VG +CE D A++R + GD++YI Sbjct: 313 LM-RPAMYGAYHHITVLGKENESCDHM-YDVVGGLCENNDKFAIDRMLPKIDIGDIVYIH 370 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE-LDSIP 417 TGA+G+ YN +L E+++ +IR T ++ LD +P Sbjct: 371 DTGAHGSAMGYNYNGKLRSAEVLLCEDGTHRLIRRAETPRDYFATLDFLP 420 >gi|150008634|ref|YP_001303377.1| diaminopimelate decarboxylase [Parabacteroides distasonis ATCC 8503] gi|298376070|ref|ZP_06986026.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_19] gi|149937058|gb|ABR43755.1| diaminopimelate decarboxylase [Parabacteroides distasonis ATCC 8503] gi|298267107|gb|EFI08764.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_19] Length = 385 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 136/369 (36%), Positives = 206/369 (55%), Gaps = 6/369 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TPFY Y ++ V YA+KAN+N ++ +A G G D VS Sbjct: 12 KQLSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIAANGLGADCVS 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GE++ AL A PA++IVF+GVGK EI+L L + I+CFNVES EL +N+ A + K Sbjct: 72 GGEVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELGIINELAAAKNK 131 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 A IA R+NP+++A+TH KI+TG KE+KFGI + Q+ + + VK+ G+ HIGS Sbjct: 132 VASIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKNVKLIGIHSHIGS 191 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR---PPSSSDYASL 259 QI + SF ++ ++L ++G +++++ GGGLGI Y+ + P + +A++ Sbjct: 192 QITDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAI 251 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 ++ EPGR +VA G L++KV+ +K+ K F ILD + +RP +YDA Sbjct: 252 HKLLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDA 311 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 YH I N + D D+VGPICE+ D + ++ GDL+ + GAYG V + Sbjct: 312 YHRIE---NISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMA 368 Query: 380 GTYNSRLLI 388 YN R L Sbjct: 369 SQYNCRHLP 377 >gi|228476511|ref|ZP_04061201.1| diaminopimelate decarboxylase [Streptococcus salivarius SK126] gi|228251932|gb|EEK10978.1| diaminopimelate decarboxylase [Streptococcus salivarius SK126] Length = 417 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 102/404 (25%), Positives = 160/404 (39%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 LEK+ TPF+ Y I + + AF +A+KA N A++K L G Sbjct: 12 LEKITAEFPTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D ++ EL + + I F+ + I E + Sbjct: 72 GVDCATDTELVMSKKIGFDSSAISFTSNDTRA--EEFVYARDINATINLDAYEDIFFLEE 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A L + + F + T I +E KFG+ Q+ YAY Sbjct: 130 AAGLPETLSLRFNPGGVFSLGTD--IMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G ++ I++ GG+G+ Y ++ + Sbjct: 188 AFLASNTVTNEYYPTLAAQLFELAVEIKNELGVSLDFINLSGGVGVDYTPANKQNDIAVI 247 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H F + I E GRF+ A G++VTKV+ IK + + +V +D + Sbjct: 248 GEGVHAKFDEILVPNGLGHISIYTELGRFMTAPHGLVVTKVLHIKDT-YRRYVGVDASAV 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +YDAYH I + NP GD D+ G +CE D A NR++ R GD L I Sbjct: 307 NLLRPAMYDAYHHITNMTNPDGDI--QVVDVTGSLCENNDKFAKNRELPEARIGDTLVIH 364 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI+ +IR T + Sbjct: 365 DTGAHGFSMGYNYNGRLRSAEILYQEDGTARMIRRAETMNDYFA 408 >gi|153808224|ref|ZP_01960892.1| hypothetical protein BACCAC_02512 [Bacteroides caccae ATCC 43185] gi|149129127|gb|EDM20343.1| hypothetical protein BACCAC_02512 [Bacteroides caccae ATCC 43185] Length = 386 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 139/370 (37%), Positives = 199/370 (53%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 +QTPFY Y T + + V YA+KAN+N V+ + G G D V Sbjct: 11 RTLQTPFYYYDTKVLRDTLSAINQEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA +IVF+GVGK EI+L L+ GI+CFNVES EL+ +N+ A + Sbjct: 71 SGGEIRAAIRAGFPASKIVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQN 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KIANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAVEMKHVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---DYAS 258 SQI + F + +L +L + ++HI+VGGGLGI Y +R P + +++ Sbjct: 191 SQILDMGDFIALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQPIPNFKDYFST 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L++KV+ +K+ A K F ILD M D +RP LY Sbjct: 251 YAGQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGAKKKFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH + N + D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AYH---KMENITSEEPVESYDVVGPICESSDVFGKVIDLNKVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRELP 377 >gi|295101800|emb|CBK99345.1| Diaminopimelate decarboxylase [Faecalibacterium prausnitzii L2-6] Length = 432 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 89/410 (21%), Positives = 151/410 (36%), Gaps = 13/410 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSG 77 + + V TPF+ Y I +N + AF +A+KA N +++ L G G Sbjct: 13 QDIIQDVPTPFHVYDEKGIRENARRINKAFSWNKGFREYFAVKALPNPVILQILKEEGCG 72 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D S EL + I+FS ++++ A + G Y ++ Sbjct: 73 VDCSSLTELMLSEVCGFSGSDIMFSSNQTPVEDMKKAYELGAYINLDDATMVDFLDRVAG 132 Query: 138 VSLGKKAPIAFR-VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 V + ++ + K+G+ Q+ Y + Sbjct: 133 VPENIFCRYNPGGTFQLGESKEGFQVMDKPGDAKYGMTEEQMIDSYKKLAAKGAKNFGIH 192 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I A L + + ++ G +I +I++ GG+GI Y + Sbjct: 193 AFLASNTISDAYYPELAGILFQLAVRVQKATGVHIAYINLSGGVGIPYRPEQTENDIMAI 252 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + F I E GRF G LV I K + + A N Sbjct: 253 GEGVRKKFEEILVPAGMGDVSIFTEMGRFTTGPYGALVATAIHEKHIYKEYIGLDACAAN 312 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I + H D+VG +CE D A++R + GD++YI Sbjct: 313 LM-RPAMYGAYHHITVLGKEDAPHDH-KYDVVGGLCENNDKFAIDRMLPKIDIGDIVYIH 370 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE-LDSIP 417 TGA+G+ YN +L E+++ +IR T ++ LD +P Sbjct: 371 DTGAHGSAMGYNYNGKLRSAEVLLCEDGSHRLIRRAETPRDYFATLDFLP 420 >gi|260173808|ref|ZP_05760220.1| diaminopimelate decarboxylase [Bacteroides sp. D2] gi|315922071|ref|ZP_07918311.1| diaminopimelate decarboxylase [Bacteroides sp. D2] gi|313695946|gb|EFS32781.1| diaminopimelate decarboxylase [Bacteroides sp. D2] Length = 386 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 132/370 (35%), Positives = 192/370 (51%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 +QTPFY Y T + + V YA+KAN+N V+ + G G D V Sbjct: 11 RTLQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA ++VF+GVGK EI+L L+ GI+CFNVES EL+ +N+ A + Sbjct: 71 SGGEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQN 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KVANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSSDYAS 258 SQI + F + +L +L + ++HI+VGGG + P +A+ Sbjct: 191 SQILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L++KV+ +K+ K F ILD M D +RP LY Sbjct: 251 YAGQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H + N + D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AFH---KMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASRYNCRELP 377 >gi|324993658|gb|EGC25577.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK405] gi|324995030|gb|EGC26943.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK678] gi|327474531|gb|EGF19936.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK408] Length = 416 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 96/404 (23%), Positives = 161/404 (39%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITDQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KEAAGIPKIISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 AFLASNTVSNDYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVT V K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTNVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + + D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--PEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNVRMIRRAEKPEDYFA 407 >gi|283798516|ref|ZP_06347669.1| diaminopimelate decarboxylase [Clostridium sp. M62/1] gi|291073776|gb|EFE11140.1| diaminopimelate decarboxylase [Clostridium sp. M62/1] gi|295090150|emb|CBK76257.1| Diaminopimelate decarboxylase [Clostridium cf. saccharolyticum K10] Length = 451 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 148/404 (36%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N AF +A+KA N +I L L Sbjct: 41 LKEITKTYPTPFHLYDEKGIRENAERLKRAFSWNKGFREYFAVKATPNPFIIDILKKLDC 100 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL A A E+I+FS ++E A G + Sbjct: 101 GVDCSSLTELMMAEAMEYDGEKIMFSSNDTPLEEFQKADSLGAIINLDDITHIEFLEKAI 160 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ QI + + + Sbjct: 161 GHIPE---TISCRYNPGGLFKISNDIMDNPGDAKYGMTTEQIFEAFKILKSKGAKRFGIH 217 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G I I++ GG+GI Y D P Sbjct: 218 AFLASNTVTNEYYPMLAKVLFELAVKLKEETGAEIAFINLSGGIGIPYRPDQEPNDIFMI 277 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++ G LVT I K + K ++ +D Sbjct: 278 GEGVRKVYEEVLVPAGMGDVAIYTELGRFMLGPYGCLVTTAIHEKHT-HKEYIGVDACAV 336 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H DI G +CE D A++R + GDLL I Sbjct: 337 NLMRPAMYGAYHHITVMGKEKEPCDH-KYDITGSLCENNDKFAIDRMLPKIDLGDLLVIH 395 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T ++ Sbjct: 396 DTGAHGFSMGYNYNGKLRSAELLLREDGSVQMIRRAETPRDYFA 439 >gi|255014433|ref|ZP_05286559.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_7] Length = 386 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 136/369 (36%), Positives = 207/369 (56%), Gaps = 6/369 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TPFY Y ++ V YA+KAN+N ++ +A G G D VS Sbjct: 12 KQLSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIATNGLGADCVS 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GE++ AL A PA++IVF+GVGK EI+L L + I+CFNVES EL+ +N+ A + K Sbjct: 72 GGEVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELEIINELAAAKNK 131 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 A IA R+NP+++A+TH KI+TG KE+KFGI + Q+ + + VK+ G+ HIGS Sbjct: 132 VASIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKHVKLIGIHSHIGS 191 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR---PPSSSDYASL 259 QI + SF ++ ++L ++G +++++ GGGLGI Y+ + P + +A++ Sbjct: 192 QITDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAI 251 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 ++ EPGR +VA G L++KV+ +K+ K F ILD + +RP +YDA Sbjct: 252 HKLLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDA 311 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 YH I N + D D+VGPICE+ D + ++ GDL+ + GAYG V + Sbjct: 312 YHRIE---NISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMA 368 Query: 380 GTYNSRLLI 388 YN R L Sbjct: 369 SQYNCRHLP 377 >gi|322391328|ref|ZP_08064798.1| diaminopimelate decarboxylase [Streptococcus peroris ATCC 700780] gi|321145754|gb|EFX41145.1| diaminopimelate decarboxylase [Streptococcus peroris ATCC 700780] Length = 417 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 100/410 (24%), Positives = 163/410 (39%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 +LEK+ TPF+ Y I + + AF +A+KA N ++K Sbjct: 5 FINREALEKIVQEFPTPFHLYDEKGIREKARAVNKAFSWNKGFKEYFAVKATPNPTILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + ++FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLGFSGSEMMFSSNNTPDREYTYAHELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ Y Sbjct: 121 EDIEHLERAAGIPEVISCRYNPGGVFELGTDIMDNPGEAKFGMTKQQLFDAYKILKDKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + + A +L + G +++ I++ GG+G+ Y + P Sbjct: 181 KRFGLHSFLASNTVTHLYYPELARQLFELAVEVKEKLGISLEFINLSGGIGVNYRPEQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + Q + + Q KI E GRF++A G+LVT+V KK+ +T++ Sbjct: 241 NDIALIGEGVRQVYEEVLTPAGLGQVKIFTELGRFMLAPHGVLVTRVTHKKKT-YRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHITNM--MHPDGQTEVVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILFTEEGKAKEIRRAERPEDYFA 407 >gi|255690076|ref|ZP_05413751.1| diaminopimelate decarboxylase [Bacteroides finegoldii DSM 17565] gi|260624353|gb|EEX47224.1| diaminopimelate decarboxylase [Bacteroides finegoldii DSM 17565] Length = 386 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 133/370 (35%), Positives = 194/370 (52%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 +QTPFY Y T + + V YA+KAN+N V+ + G G D V Sbjct: 11 RTLQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLAIIRESGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA ++VF+GVGK EI+L L+ GI+CFNVES EL+ +N+ A + Sbjct: 71 SGGEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQN 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + + + A + +K G+ HIG Sbjct: 131 KIANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVALGMKNIKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSSDYAS 258 SQI + F + +L +L ++ ++HI+VGGG + P +A+ Sbjct: 191 SQILDMGDFVALCNRVNELQDKLEAHRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L++KV+ +K+ A K F ILD M D +RP LY Sbjct: 251 YAGQLKLRPYQTLHFELGRAVVGQCGTLISKVLYVKQGAKKKFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH + N + D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AYH---KMENLTSEEPMEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRELP 377 >gi|293189484|ref|ZP_06608204.1| diaminopimelate decarboxylase [Actinomyces odontolyticus F0309] gi|292821574|gb|EFF80513.1| diaminopimelate decarboxylase [Actinomyces odontolyticus F0309] Length = 466 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 121/434 (27%), Positives = 187/434 (43%), Gaps = 26/434 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--------MDTMVCYA 58 G L V L +A TP + A+ +++A YA Sbjct: 29 EGGVLRLGGVDLTSVAADFGTPTFVLDVEAMRGRARVWASAMAEEFWDGYGMNGGDAFYA 88 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + V + +A G G+D S GEL AL A V +RI G K+ EI LALQ+G Sbjct: 89 GKAFLSADVARLVAAEGMGIDTASLGELSLALRAGVGPDRIGLHGNNKSDAEIRLALQAG 148 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ ++S E+ + + A LG AP+ R+ I+A ++ I+T ++ KFG+ + Sbjct: 149 IHRIFIDSMDEVHQIERIAADLGVVAPVMVRLKSGIHAGGNEYIATAHEDQKFGLSLATG 208 Query: 179 HSLYAYASTLP--GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHID 235 + A A + G+ HIGSQI E+F +A +++ D L+ G ++ ID Sbjct: 209 QAYEAVAVIKDAAHLDFRGLHSHIGSQIFGTEAFAEAARIVIDFAALLKAELGLDVPAID 268 Query: 236 VGGGLGIAYHSDHRPPSSS--------DYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 +GGG+GIAY P+S + G + +EPGR + +++ Sbjct: 269 LGGGVGIAYTGQDPVPTSPVEVARALATVVRERCAHHGLPIPHVSVEPGRSIAGPSMVML 328 Query: 288 TKV-----ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH-IHADIV 341 +V IS++ + +V +D M+D +RP LYDA + D IV Sbjct: 329 YRVGVVKDISLEDGGVRRYVAIDGGMSDNIRPVLYDAAYTATLANRDPADASELARCRIV 388 Query: 342 GPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHI 400 G CE+GD I + + GDLL + GAYG + YN + V Sbjct: 389 GKHCESGDIIIRDIDLPADIAGGDLLAVPAVGAYGYSMASNYNMLTKPGVLAVEDGSARW 448 Query: 401 IRPRMTFQELIELD 414 T L+ LD Sbjct: 449 FIRPQTVDHLLALD 462 >gi|225026452|ref|ZP_03715644.1| hypothetical protein EUBHAL_00701 [Eubacterium hallii DSM 3353] gi|224956218|gb|EEG37427.1| hypothetical protein EUBHAL_00701 [Eubacterium hallii DSM 3353] Length = 417 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 98/405 (24%), Positives = 149/405 (36%), Gaps = 16/405 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+K+ TPF+ Y I + AF +A+KA A++K L G Sbjct: 12 LDKIVEKYPTPFHLYDEKGIRQTARDLYKAFSWNEGFKEYFAVKATPTPAILKILQEEGC 71 Query: 77 GLDIVSEGELRRALAAPV-PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G D S EL + I+FS +E LA + G + + Sbjct: 72 GTDCSSLTELMMSDRCGFADGNSIMFSSNETPAEEFILAKKLGAIINLDDITHIDFLKDA 131 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 G I R NP + I + K+G+ QI + + Sbjct: 132 C----GIPERICCRYNPGGYFSLGTDIMDNPGDAKYGMTKPQIFEAFKRLKREGVKEFGI 187 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + + A L + + G +I I++ GG+GI Y D P Sbjct: 188 HSFLASNTVSNEYYPALASILFNLAVELKENLGVHIGFINLSGGVGIPYTPDKEPNDIFA 247 Query: 256 YASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + + + KI E GRF++A G LV K I K + + + A Sbjct: 248 IGEGVRKAYEEILVPAGMGDVKIFTELGRFMLAPHGHLVVKAIHEKHTYKEYIGVDACAA 307 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 N RP +Y AYH I + + D+VG +CE D A++RK+ GDLL + Sbjct: 308 NLM-RPAMYGAYHHITVMGK-ENEPCDHTYDVVGSLCENNDKFAIDRKLPKIDMGDLLVL 365 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI++ +IR T ++ Sbjct: 366 HDTGAHGFSMGYNYNGRLKSAEILLQEDGSTRMIRRAETPEDYFA 410 >gi|160943971|ref|ZP_02091201.1| hypothetical protein FAEPRAM212_01472 [Faecalibacterium prausnitzii M21/2] gi|158444647|gb|EDP21651.1| hypothetical protein FAEPRAM212_01472 [Faecalibacterium prausnitzii M21/2] gi|295104795|emb|CBL02339.1| Diaminopimelate decarboxylase [Faecalibacterium prausnitzii SL3/3] Length = 428 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 92/410 (22%), Positives = 155/410 (37%), Gaps = 13/410 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSG 77 +++ V TPF+ Y I +N + AF +A+KA N +++ L G G Sbjct: 13 QQIIEDVPTPFHVYDEKGIRENVRRINKAFSWNKGFKEYFAVKALPNPVILQILKEEGCG 72 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D S EL + A I+FS ++++ A + G Y ++ Sbjct: 73 VDCSSLTELMLSEACGFTGHEIMFSSNQTPVEDMQKAYELGAYINLDDATMVEFLERVAG 132 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKK-EDKFGIPIHQIHSLYAYASTLPGVKISGV 196 V + + K + K+G+ Q+ Y + Sbjct: 133 VPQEIFCRYNPGGTFQLGESEEGFQVMDKPGDAKYGMTEQQMIDSYKKLMQKGAKQFGIH 192 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I A L + + ++ G +I +I++ GG+GI Y + Sbjct: 193 AFLASNTISDAYYPELAGILFQLAVRVQQATGAHISYINLSGGVGIPYRPEQTENDIMAI 252 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + F I E GRF G LV+ VI K + + A N Sbjct: 253 GEGVRKKFEEILVPAGMGDVAIFSEMGRFTTGPYGALVSTVIHEKHIYKEYIGLDACAAN 312 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I + + D+VG +CE D A++R + GD+LYI Sbjct: 313 LM-RPAMYGAYHHITVLGK-ENEPCDHKYDVVGGLCENNDKFAVDRMLPKIDIGDILYIH 370 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE-LDSIP 417 TGA+G+ YN +L E+++ +IR T ++ LD +P Sbjct: 371 DTGAHGSAMGYNYNGKLHCAEVLLCEDGSHRLIRRAQTPRDYFATLDFLP 420 >gi|327490088|gb|EGF21876.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1058] Length = 416 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 162/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITDQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 S G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KESAGIPKIISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 AFLASNTVINDYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + + D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--PEGETEIVDVVGSLCENNDKFAINRALPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNVRMIRRAEKPEDYFA 407 >gi|319946455|ref|ZP_08020692.1| diaminopimelate decarboxylase [Streptococcus australis ATCC 700641] gi|319747423|gb|EFV99679.1| diaminopimelate decarboxylase [Streptococcus australis ATCC 700641] Length = 449 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 99/404 (24%), Positives = 166/404 (41%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 44 LKQITETYPTPFHLYDEAGIRQTARALHQAFSWNPGFKEYFAIKATPNPAILKILKEEGC 103 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL A + I+FS +E+ A Q G + + Sbjct: 104 GVDCASYVELLMAQKLGFTGQEIMFSSNNTPAEEMFFARQLGATINLDA----YEDVAFL 159 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I +E KFG+ Q+ + L + Sbjct: 160 QSVATLPEVISCRYNPGGVFELGTDIMDHPEEAKFGMTKEQLIQAFIELKILGVKRFGIH 219 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + + G + +++ GG+G+ Y + +P + Sbjct: 220 ALLASNTVSNDYYPELAKQLFQLAVEVVEKTGVTLDFVNLSGGVGVNYKPEDQPNDIAVI 279 Query: 257 ASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + Q KI E GRF++A G+LVT V K++ +T++ +D + Sbjct: 280 GEGVRRAYEDILVPAGLDQVKIYTELGRFMLASHGLLVTHVTHKKQT-YRTYLGVDASAV 338 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y AYH I + D DIVG +CE D A NR+ + GDLL I Sbjct: 339 NLLRPAMYGAYHHITNLDR--PDGETEVVDIVGSLCENNDKFAKNREFPVSEIGDLLVIH 396 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNG-SQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ Q +IR ++ Sbjct: 397 DTGAHGYSMGYQYNAKLRSAEILLEESGQTRLIRRAEKPEDYFA 440 >gi|229819776|ref|YP_002881302.1| diaminopimelate decarboxylase [Beutenbergia cavernae DSM 12333] gi|229565689|gb|ACQ79540.1| diaminopimelate decarboxylase [Beutenbergia cavernae DSM 12333] Length = 455 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 117/426 (27%), Positives = 191/426 (44%), Gaps = 21/426 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLT----FSNAFDGMDTMVCYALKANSN 64 G L V + LA TP Y + F+ V YA KA + Sbjct: 29 GELEVAGVPVSDLAGRFGTPVYVLDEADLRARARAYRDAFTRELAPSSVHVYYAGKAFLS 88 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 AV + + G +D + GEL AL A +P I G K+ EID AL +G+ V Sbjct: 89 IAVARWVHAEGLRIDTATGGELAVALRAGIPGADIGMHGNNKSDAEIDRALAAGVGRIVV 148 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLY 182 +S E+ + A G +AP+ RV ++A H+ IST ++ KFG+ I + Sbjct: 149 DSLPEVARVADAAARRGVRAPVMVRVTTGVHAGGHEYISTAHEDQKFGLSIAAGRAEEAV 208 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLG 241 A P +++ G+ HIGSQ+ + E+F A + + +L ++ + +D+GGG G Sbjct: 209 AAVLARPELELLGLHSHIGSQVLEAEAFTVAARSVLELRARIAETHGVLVGEVDLGGGYG 268 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK 294 +AY P + A+ + + + + +EPGR +VA G + V ++K Sbjct: 269 VAYLPGEVPLDPAMLAAELARTVREVCAELGTDVPDVSIEPGRAIVAPAGCTLYTVGTVK 328 Query: 295 KSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 D+ +V +D M+D +RP LY A + I + A + + +VG CE+GD Sbjct: 329 PVRATDGADRLYVSVDGGMSDSIRPALYGAAY-TATIASRASAAPPVRSRVVGKHCESGD 387 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + + GDLL + TGAYG + YN + V G + + R T + Sbjct: 388 IVVHDVDLPADVAAGDLLAVPATGAYGRSMASQYNLVPRPGVVAVAGGEARAVIRRETEE 447 Query: 409 ELIELD 414 +++ LD Sbjct: 448 DVLALD 453 >gi|332367400|gb|EGJ45133.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1059] Length = 416 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 163/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITDQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + K Sbjct: 127 KEAAGIPKIISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKEFGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 ALLASNTVSNDYYPELARQLFELAVEVVVETGVELDFINLSGGVGINYQPEGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I +V + D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMVR--PEGETEIVDVVGSLCENNDKFAINRALPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNVRMIRRAEKPEDYFA 407 >gi|322373867|ref|ZP_08048402.1| protein TabA [Streptococcus sp. C150] gi|321277239|gb|EFX54309.1| protein TabA [Streptococcus sp. C150] Length = 421 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 157/404 (38%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y I + + AF +A+KA N A+++ L G Sbjct: 16 LEQITAEFPTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILRILKEEGC 75 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D ++ EL + I F+ + I E + Sbjct: 76 GVDCATDTELVMSKKIGFDNTTISFTSNDTRS--EEFVYARNIDATINLDAYEDIFFLEE 133 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 L + + F + T I +E KFG+ Q+ YAY Sbjct: 134 VAGLPETLSLRFNPGGVFSLGTD--IMDHPEESKFGMTKEQLFKGYAYLQEKGVKSFGLH 191 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G ++ I++ GG+G+ Y ++ Sbjct: 192 AFLASNTVTNEYYPTLAAQLFELAVEIKNELGVSLDFINLSGGVGVDYTPANKQNDIVAI 251 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H F + I E GR++ A G++VTKV+ IK + + +V +D + Sbjct: 252 GEGVHAKFDEILVPNGLGHISIYTELGRYMTAPHGLVVTKVLHIKDT-YRRYVGVDASAV 310 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +YDAYH I + NP G+ D+ G +CE D A NR++ R GD L I Sbjct: 311 NLLRPAMYDAYHHITNMTNPNGEI--QVVDVTGSLCENNDKFAKNRELPEARIGDTLVIH 368 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI+ +IR T + Sbjct: 369 DTGAHGFSMGYNYNGRLRSAEILYQEDGTARMIRRTETMNDYFA 412 >gi|27904869|ref|NP_777995.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46395814|sp|Q89AC6|DCDA_BUCBP RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|27904267|gb|AAO27100.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 418 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 126/431 (29%), Positives = 196/431 (45%), Gaps = 32/431 (7%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS + + K+ TP + Y + I K S FD ++ +A K Sbjct: 1 MSGLLKKKQRFSCN--DILKIVSKYGTPLWVYDSNIIVKKIKELSQ-FD----VIRFAQK 53 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN ++ +D VS GE+ RAL + + V T D I+ + + Sbjct: 54 SCSNIHILNLFYKYNVKIDAVSLGEIERALISKY--RFTMDQDVVFTSDIIERETLNKVV 111 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 + + + ++ + I R+NP KK +TG + K GI + Sbjct: 112 QYKIPINIGSIDMLEQVGKISPGHNIWLRINPKFGHGHSKKTNTGGENSKHGIWDINLAF 171 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 Y K+ G+ MHIGS +D ++ + + Q+ I I GGGL Sbjct: 172 PYITKYNF---KLIGLHMHIGSGVDYCH----LKRVCKAMIDQVLQCKFKIHVISAGGGL 224 Query: 241 GIAYHSDHRPPSSSDYASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + YH + P + +Y L ++ + N ++ +EPGRFLVA+ GILV+++ IK Sbjct: 225 TVPYHCNDEPVNVKNYFFLWNKARKIISNYLNRPIRLEIEPGRFLVAESGILVSEIRVIK 284 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFI 351 K+ ++TF+++D ND +RP +Y +YH I I A + GP+CE+GD Sbjct: 285 KTNNRTFILVDSGFNDLIRPAMYGSYHHISVIPRDGRCVNYDDTIEAVVCGPLCESGDVF 344 Query: 352 ALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPR 404 N R + + GD L TGAYGA S YNSR LIPEI+ ++FHIIR R Sbjct: 345 TQNEYGDIKTRILPNVQIGDFLVFHDTGAYGASMSSNYNSRPLIPEILFKDNEFHIIRRR 404 Query: 405 MTFQELIELDS 415 T +EL+EL+ Sbjct: 405 QTMKELLELEI 415 >gi|125718586|ref|YP_001035719.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK36] gi|125498503|gb|ABN45169.1| Diaminopimelate decarboxylase, putative [Streptococcus sanguinis SK36] Length = 416 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 99/404 (24%), Positives = 164/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITDKFPTPFHLYDEEGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFVGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KEAAGIPKIISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 AFLASNTVSNDYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + P G+ D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDRPMGE--TEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNVRMIRRAEKPEDYFA 407 >gi|294673237|ref|YP_003573853.1| diaminopimelate decarboxylase [Prevotella ruminicola 23] gi|294472253|gb|ADE81642.1| diaminopimelate decarboxylase [Prevotella ruminicola 23] Length = 386 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 141/370 (38%), Positives = 201/370 (54%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + ++TPFY Y T + + T + A +V YA+KAN+N +++ + G G D V Sbjct: 12 NEIETPFYYYDTVLLRQTLQTINSEASKHEGFVVHYAVKANANPRILRIIREAGLGADCV 71 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+ ++ A P E+IV++GVGK+ EI L L + I+CFNVES EL+ +N+ A G Sbjct: 72 SGGEVEASIKAGFPKEKIVYAGVGKSDWEIKLGLDNDIFCFNVESIPELEVINELAAQKG 131 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NP++ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 132 KVARVAFRLNPNVGAHTHANITTGLAENKFGIAMGDMVKVIREAEKMENVKFVGLHFHIG 191 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 SQI + F + +L Q+L S+ ++HI+VGGGLGI Y +R P A Sbjct: 192 SQILDMGDFEALCNRVNELQQELISHRIRVEHINVGGGLGIDYAHPNRVPIPDFKAYFDT 251 Query: 262 QYFG---NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + E GR +VA G L+T+ + IK+ A K F I+D D +RP LY Sbjct: 252 YAKKLKLQPGQTLHFELGRAVVAQCGSLITRTLYIKEGAVKKFAIVDAGFTDLIRPALYQ 311 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH I N D D+VGPICE+ D A + + GDLL I GAYG + Sbjct: 312 AYH---KIENITSDEAPEAYDVVGPICESTDVFAKQIDLNKAKRGDLLAIRSAGAYGEIM 368 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 369 ASQYNCRRLP 378 >gi|332362247|gb|EGJ40047.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1056] Length = 416 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 99/404 (24%), Positives = 162/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITAQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 S G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KESAGIPKIISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G + I++ GG+GI Y D + Sbjct: 187 AFLSSNTVSNDYYPELARQLFELAVEVVAETGVKLDFINLSGGVGINYQPDGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + + D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--SESETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNVRMIRRAEKPEDYFA 407 >gi|257065485|ref|YP_003145157.1| diaminopimelate decarboxylase [Slackia heliotrinireducens DSM 20476] gi|256793138|gb|ACV23808.1| diaminopimelate decarboxylase [Slackia heliotrinireducens DSM 20476] Length = 432 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 96/404 (23%), Positives = 150/404 (37%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 LE +A TPF+ Y I KN +AF +A+KAN N +I L G Sbjct: 12 LEAIAEQFPTPFHLYDEAGIRKNMEAVRDAFAWNPGFKEYFAVKANPNPFIINILKEYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A + I+FS ++ LA + G + Sbjct: 72 GCDCSSFTELMISEAVGITGHDIMFSSNDTPAEDFVLADKLGALVNFDDITHIEFYEQ-- 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 ++ + R NP I + K+G+ Q+ + Sbjct: 130 -LTGHIPETVCCRFNPGGLFEMANGIMDAPGDAKYGMTADQLREAFRMCKAKGAKHFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + R +I I++ GG+G+AY D P Sbjct: 189 AFLASNTVTNEYYPQLAGVLFQLAVDIARETDVHIAFINLSGGVGVAYSPDQEPNDIRAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++A G LVT+ I K + K ++ +D Sbjct: 249 GEGVRRVYDEVLVPAGMGDVAIYTEMGRFMLAPYGCLVTRAIHEKHT-YKEYIGVDANAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y AYH I H+ D+VG +CE D A++R + GDLL I Sbjct: 308 NLIRPAMYGAYHHITVAGKEDAPCDHV-YDVVGNLCENNDKFAVDRSLPEIEMGDLLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 GA+G YN RL E+++ +IR + Sbjct: 367 DAGAHGHAMGYNYNGRLKSAEVLLQTDGTPKLIRRAERPSDYFA 410 >gi|24380094|ref|NP_722049.1| putative diaminopimelate decarboxylase [Streptococcus mutans UA159] gi|290579927|ref|YP_003484319.1| putative diaminopimelate decarboxylase [Streptococcus mutans NN2025] gi|24378089|gb|AAN59355.1|AE015000_13 putative diaminopimelate decarboxylase [Streptococcus mutans UA159] gi|254996826|dbj|BAH87427.1| putative diaminopimelate decarboxylase [Streptococcus mutans NN2025] Length = 416 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 103/404 (25%), Positives = 161/404 (39%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L+K+ TPF+ Y I + + AF +A+KA N ++K L G Sbjct: 11 LDKITAQFPTPFHLYDEKGIRETARAVNKAFAWNSGFKEFFAVKATPNPTILKILQEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D ++ EL+ A I F+ E A E Sbjct: 71 GVDCATDVELKMADKLGFDRSAISFTSNDTQASEFVFARSINATINLDAYEHIAFLEEAA 130 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + ++ R NP + I +E KFG+ Q+ Y Sbjct: 131 GLPET----VSLRFNPGGVFSLGTDIMDHPEESKFGMTKEQLFQGYQDLKDKGVKSFGLH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G ++ I++ GG+GI Y + + Sbjct: 187 AFLASNTVTNDYYPTLAAQLFELAVEIKNELGISLDFINLSGGIGIDYSAADEQNDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +HQ F ++ Q KI E GR+++A G L+TKV+ +K + + +V +D + Sbjct: 247 GEGVHQKFDDILVPNGLSQIKIYTELGRYMLASHGHLITKVLHLKDT-YRHYVGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +YDAYH I I NP G DIVG +CE D A R++ R GD L I Sbjct: 306 NLLRPAMYDAYHHITNISNPQG--TVQVVDIVGSLCENNDKFAKRRELPEARVGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI++ Q +IR T ++ Sbjct: 364 DTGAHGFSMGYNYNGRLRSAEILLREDGQTQMIRRAETPEDYFA 407 >gi|325690948|gb|EGD32948.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK115] Length = 416 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 99/404 (24%), Positives = 163/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITDQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL I+FS +E A G + + Sbjct: 71 GVDCASYVELLMGQKLGFAGRDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KEAAGIPKVISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 ALLASNTVSNDYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + P G+ D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDRPMGE--TEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNVRMIRRAEKPEDYFA 407 >gi|281419868|ref|ZP_06250867.1| diaminopimelate decarboxylase [Prevotella copri DSM 18205] gi|281405995|gb|EFB36675.1| diaminopimelate decarboxylase [Prevotella copri DSM 18205] Length = 385 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 138/370 (37%), Positives = 204/370 (55%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSN-AFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 +QTPFY Y T + + T + A V YA+KAN+N V+ + G G D V Sbjct: 11 QEIQTPFYYYDTNVLRQTLKTINEEAGKHEGFEVHYAVKANANPKVLNIICQAGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE++ A+ A PA +IV++GVGK+ EI+L L+ GI+CFNVES EL+ +N+ A Sbjct: 71 SGGEIQAAIKAGFPASKIVYAGVGKSDWEINLGLEKGIFCFNVESIPELEIINELAEKQN 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A + FR+NPD+ A+TH I+TG E+KFGI + + ++ A+ + ++ G+ HIG Sbjct: 131 KIAQVCFRINPDVGAHTHANITTGLAENKFGIAMRDMEAVIEEAAKMKNIQFLGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---DYAS 258 SQI + F + +L QL ++ +++I+VGGGLGI Y+ +R P + + + Sbjct: 191 SQILDMGDFEALCNRINELQNQLEAHHIVVKNINVGGGLGIDYNHPNRQPIPNFKDYFDT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + K+ E GR +V +G L+TK + IK+ K F I+D M D +RP LY Sbjct: 251 YAKKLKLRDGQKLHFELGRAVVGQMGSLITKTLYIKQGTAKQFAIVDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH I N + D D+VGPICE+ D I GDL+ + GAYG + Sbjct: 311 AYH---KIENISSDEPVETYDVVGPICESSDVFGKAVDINKAHRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASQYNCRQLP 377 >gi|160882269|ref|ZP_02063272.1| hypothetical protein BACOVA_00215 [Bacteroides ovatus ATCC 8483] gi|156112358|gb|EDO14103.1| hypothetical protein BACOVA_00215 [Bacteroides ovatus ATCC 8483] Length = 386 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 132/370 (35%), Positives = 192/370 (51%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 +QTPFY Y T + + V YA+KAN+N V+ + G G D V Sbjct: 11 RTLQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA ++VF+GVGK EI+L L+ GI+CFNVES EL+ +N+ A + Sbjct: 71 SGGEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQN 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KVANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSSDYAS 258 SQI + F + +L +L + ++HI+VGGG + P +A+ Sbjct: 191 SQILDMSDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L++KV+ +K+ K F ILD M D +RP LY Sbjct: 251 YAGQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H + N + D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AFH---KMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRELP 377 >gi|323356878|ref|YP_004223274.1| diaminopimelate decarboxylase [Microbacterium testaceum StLB037] gi|323273249|dbj|BAJ73394.1| diaminopimelate decarboxylase [Microbacterium testaceum StLB037] Length = 476 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 120/443 (27%), Positives = 189/443 (42%), Gaps = 40/443 (9%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAI---------------EKNYLTFSNAFD 49 + +GS+ VS+ L TP Y + E++ Sbjct: 33 RVDDGSVEIGGVSVFDLRDRFGTPLYVLDEDEVRTHARRARAAFDSAAERH--------- 83 Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 G+ V YA KA + V++ + G +D+ + GEL ALAA R+ F G K++ Sbjct: 84 GIRARVYYAGKAFLSTEVVRWVVDEGLAVDVCTRGELEVALAAGADPARLGFHGNNKSVG 143 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 E++ A++ GI ++S E++ L A G + RV ++A TH ++T ++ Sbjct: 144 ELERAVEVGIGSVVIDSPIEIERLAAIADRRGVVQSVLVRVRTGVHAETHAFLATAHEDQ 203 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 KFG + A LP ++ G+ HIGSQI F ++ L DL L G Sbjct: 204 KFGFSLEGAAEAVARIRELPSLRFVGLHAHIGSQIFDSSGFRESAARLVDLHADL-LAGG 262 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVAD 282 I ++VGGG GI+Y S P + A G + EPGR +V Sbjct: 263 EIPVLNVGGGFGISYTSVDDPKPIEEIADGILDAIADECAVRGIPMPDVATEPGRVIVGQ 322 Query: 283 VGILVTKVISIKKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH 337 G+ + +V ++K ++T+V +D M+D RP LY A + + Sbjct: 323 AGVTLYEVGTVKTVTATENLERTYVSVDGGMSDNARPALYGADFSARVVSRTSSATP-AL 381 Query: 338 ADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS 396 + +VG CE+GD + + PGDLL + TGAY + YN P + V Sbjct: 382 SRVVGRHCESGDIVVDAEYLPADVTPGDLLAVPATGAYCFSLASNYNYTPRPPVVAVRDG 441 Query: 397 QFHIIRPRMTFQELIELDS-IPA 418 Q +I T +L+ D+ IPA Sbjct: 442 QARVIVRGETVDDLLSRDAGIPA 464 >gi|293372875|ref|ZP_06619249.1| diaminopimelate decarboxylase [Bacteroides ovatus SD CMC 3f] gi|299146584|ref|ZP_07039652.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_23] gi|292632164|gb|EFF50768.1| diaminopimelate decarboxylase [Bacteroides ovatus SD CMC 3f] gi|298517075|gb|EFI40956.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_23] Length = 386 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 132/370 (35%), Positives = 192/370 (51%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 +QTPFY Y T + + V YA+KAN+N V+ + G G D V Sbjct: 11 RTLQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA ++VF+GVGK EI+L L+ GI+CFNVES EL+ +N+ A + Sbjct: 71 SGGEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQN 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KVANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSSDYAS 258 SQI + F + +L +L + ++HI+VGGG + P +A+ Sbjct: 191 SQILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L++KV+ +K+ K F ILD M D +RP LY Sbjct: 251 YAGQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H + N + D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AFH---KMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRELP 377 >gi|301167407|emb|CBW26989.1| putative diaminopimelate decarboxylase [Bacteriovorax marinus SJ] Length = 409 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 150/407 (36%), Positives = 220/407 (54%), Gaps = 16/407 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYAL 59 + Y L + +L + ++TPFY YS A+++N+ F + ++CYAL Sbjct: 8 SLSYKRNELFINDYNLHSITKDLKTPFYLYSLEALQRNFENFKTEAQSNGLKNPLICYAL 67 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID---LALQ 116 KANSN ++KTL LG+G DIVS GEL++AL A +PA++IVFSGVGK EI+ Sbjct: 68 KANSNIRLLKTLKSLGAGADIVSGGELKQALKAKIPAQKIVFSGVGKNESEIELALTCHP 127 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 GIY FNVES EL+ ++ A L K A +A R+NP +N THK ISTG K KFGI Sbjct: 128 EGIYSFNVESIEELEMISSIAQRLNKTARVALRLNPQVNVKTHKHISTGGKSHKFGI--- 184 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + A + S + + I + KA + +L ++ + ++ IDV Sbjct: 185 -LKRDIEQALLKKKLWKSVSLVGLSMHIGSQLTCLKATRKALIELCRLCNSCNQLEFIDV 243 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC---KIILEPGRFLVADVGILVTKVISI 293 GGGLG+ Y+ DH + S+Y LI + +I+ EPGR++ A+ G+L+T+VI Sbjct: 244 GGGLGVPYNEDHPLSTLSEYMELIAKITQRELKEELRIVFEPGRYIAANCGVLITEVIRS 303 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K S + F+I+D MNDF+R +LY AYH + + +VGPICET D A Sbjct: 304 KSSEENKFIIVDGGMNDFVRSSLYGAYHHVLPLKKRPSKLS--TCHVVGPICETADSFAS 361 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFH 399 NR++ L + D + I GAYG+ TYN R E +++ + Sbjct: 362 NRELPLLKAKDRICIADVGAYGSSMGSTYNMREKTREYIIDLKGEVR 408 >gi|171780260|ref|ZP_02921164.1| hypothetical protein STRINF_02048 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281608|gb|EDT47043.1| hypothetical protein STRINF_02048 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 413 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 159/404 (39%), Gaps = 18/404 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+ + + TPF+ Y I + + AF +A+KA A++K L Sbjct: 11 LQNITNEFPTPFHLYDEKGIREKARALNKAFAWNKGFKEYFAVKATPTPAILKILQEENC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D +E EL + I+FS E A + G + + Sbjct: 71 GVDCATEVELLMSHKLGFT--DIMFSSNNTPAREFKYAREIGATINLDA----YEHIAFL 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G ++ R NP + I +E KFG+ Q+ + Sbjct: 125 KEVAGLPDTVSLRYNPGGVFSLGTDIMDNPEESKFGMTKDQLIQGFKDLKAEGVKNFGIH 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G I I++ GG+G+ Y + + + Sbjct: 185 SFLASNTVTNDYYPELARQLFELAVEVKEKTGVMINFINLSGGVGVNYRPEQKANDIAVI 244 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ F + KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 245 GEGVHRVFDEVLVPGGLGDVKIFTELGRFMLAPHGLLVTKVRHRKQT-YRTYIGVDASAV 303 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +YDAYH I + N + D+VG +CE D A R++ R GD L I Sbjct: 304 NLLRPAMYDAYHHITNMTN--SNGKLEVVDVVGSLCENNDKFAKQRELPEARIGDTLVIH 361 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI+ +IR T ++ Sbjct: 362 DTGAHGFSMGYQYNGRLRSAEILYQEDGSARLIRRAETPEDYFA 405 >gi|327462927|gb|EGF09248.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1] Length = 416 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 163/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITDQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + + L K Sbjct: 127 KEAAGIPKIISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELNELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + G + I++ GG+GI Y D + Sbjct: 187 ALLASNTVSNDYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPDGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + Q KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRLAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + + D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--PEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNVRMIRRAEKPEDYFA 407 >gi|332359129|gb|EGJ36950.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK49] Length = 416 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 96/404 (23%), Positives = 161/404 (39%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITAQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + K Sbjct: 127 KEAAGIPKVISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKEFGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 AFLASNTVSNDYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + + D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--PESETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNVRMIRRAEKPEDYFA 407 >gi|224024547|ref|ZP_03642913.1| hypothetical protein BACCOPRO_01273 [Bacteroides coprophilus DSM 18228] gi|224017769|gb|EEF75781.1| hypothetical protein BACCOPRO_01273 [Bacteroides coprophilus DSM 18228] Length = 386 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 139/370 (37%), Positives = 198/370 (53%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSN-AFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y T + T A V YA+KAN+N V+ + G G D V Sbjct: 11 RELETPFYYYDTNLLRHTLDTIRKEAGKYNKFCVHYAVKANANPKVLSIIRESGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE++ A+ A PA +IV++GVGKT EI+L L I+CFNVES EL+ +N+ A + G Sbjct: 71 SGGEIKAAIKAGFPANKIVYAGVGKTDAEINLGLDYDIFCFNVESVPELEVINELATAKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + + + A + + G+ HIG Sbjct: 131 KIARVAFRINPDVGAHTHANITTGLAENKFGISMKDMDHVIDRALEMNNINFVGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 SQI + F + +L ++L + ++HI+VGGGLGI Y +R P + Sbjct: 191 SQILDMGDFTALCNRINELQEKLYARQIIVEHINVGGGLGIDYAHPNRQPVPDFASYFET 250 Query: 262 QYFG---NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + Q + E GR +V G L+TKVI +K+ +K F I+D M D +RP LY Sbjct: 251 YHKHLKLRPQQTLHFELGRSVVGQCGSLITKVIYVKQGTNKQFAIVDGGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH I N D D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AYH---KIENITSDEATETYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRQLP 377 >gi|219681789|ref|YP_002468175.1| diaminopimelate decarboxylase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471491|ref|ZP_05635490.1| diaminopimelate decarboxylase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624632|gb|ACL30787.1| diaminopimelate decarboxylase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 415 Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 111/415 (26%), Positives = 184/415 (44%), Gaps = 31/415 (7%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ L PF+ Y I K FD ++ +A K+ SN +++ + + Sbjct: 16 RIKDLIKKYSPPFWVYDADIIYKKINLLRK-FD----VIRFAQKSCSNINILRLMKNKNV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ R A + + + + T D +D + + + + + ++ Sbjct: 71 KIDAVSLGEIER---ALLSGFKPSTNEIIFTADILDEETLLKVEKYKIPVNAGSLDMLKQ 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + R+NP KK +TG + K GI + L Sbjct: 128 LGKISPGHHVWLRINPRFGYGHSKKTNTGGENSKHGIWHPEQAIPIIKKYKLKL------ 181 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + I ++ K+ + + + I I VGGGL I Y + +P Y Sbjct: 182 -IGLHMHIGSGVNYLHLKKVSQAMIKYAFQLNQKISSISVGGGLPIPYKFNDQPIDIKKY 240 Query: 257 ASLIHQYFGNL------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + ++ +EPGRFLVA+ GIL++KV + KK +K FV++DV ND Sbjct: 241 FMLWDIARKKISKFLGEKIELEIEPGRFLVAESGILISKVWATKKMGNKNFVLVDVGFND 300 Query: 311 FMRPTLYDAYHEINYIV---NPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRPT+Y +YH I+ I ++ I + GP+CE+GD RK+ Sbjct: 301 LMRPTMYGSYHHISVIYGDDRKMNEKETIDTVVAGPLCESGDIFTQKEGGTVQTRKLPTI 360 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GD L TGAYGA S YN+R LIPEI++ + +IR R T +E++ L+ Sbjct: 361 KVGDYLIFHDTGAYGAAMSSNYNTRPLIPEILLKNNDSIVIRRRQTIEEILNLEK 415 >gi|225548244|ref|ZP_03769529.1| hypothetical protein RUMHYD_00223 [Blautia hydrogenotrophica DSM 10507] gi|225040584|gb|EEG50830.1| hypothetical protein RUMHYD_00223 [Blautia hydrogenotrophica DSM 10507] Length = 427 Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 148/410 (36%), Gaps = 15/410 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N AF +A+KA N +I+ L G Sbjct: 12 LKEITKEYPTPFHLYDEKGIRENAKALKEAFAWNKGYKEYFAVKATPNPYLIQILQEYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A A + I+FS +E + A + G + Sbjct: 72 GCDCSSLTELMMAKALGCKGDDIMFSSNATPANEYEYARKIGAIINLDDITHIDFLEK-- 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 V+ I+ R NP I + K+G+ QI + + + Sbjct: 130 -VTGSIPKKISCRYNPGGLFKISNDIMDNPGDAKYGMTTEQIFEAFKILKSKGAQEFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G I I++ GG+GI Y D Sbjct: 189 AFLASNTVTNDYYPTLAKVLFEVAVKLKEETGAKITFINLSGGIGIPYRPDQTANDIRVI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + E GRF++ G LVT I K + + A N Sbjct: 249 GEGVRKVYEEVLVPAGMGDVALYTELGRFMMGPYGALVTTAIHEKHTYKEYIGCDACAAN 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I + H D+ G +CE D A++RK+ GDLL++ Sbjct: 309 LM-RPAMYGAYHHITVMGKEDAPCDH-TYDVTGSLCENNDKFAIDRKLPKIEMGDLLFLH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE-LDSIP 417 GA+G YN +L EI++ + +IR Q+ D P Sbjct: 367 DAGAHGFSMGYNYNGKLRSAEILLKEDGSYQMIRRAEKPQDYFATFDCFP 416 >gi|154509453|ref|ZP_02045095.1| hypothetical protein ACTODO_01984 [Actinomyces odontolyticus ATCC 17982] gi|153799087|gb|EDN81507.1| hypothetical protein ACTODO_01984 [Actinomyces odontolyticus ATCC 17982] Length = 466 Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 119/434 (27%), Positives = 186/434 (42%), Gaps = 26/434 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--------MDTMVCYA 58 G L V L +A TP + A+ +++A YA Sbjct: 29 EGGVLRLGGVDLTSVAADFGTPTFVLDVEAMRGRARVWASAMAEEFWDGYGMNGGDAFYA 88 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + V + +A G G+D S GEL AL A V +RI G K+ EI LAL++G Sbjct: 89 GKAFLSADVARLVAAEGLGIDTASLGELSLALRAGVDPDRIGLHGNNKSDAEIRLALEAG 148 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ ++S E+ + + A LG AP+ R+ I+A ++ I+T ++ KFG+ + Sbjct: 149 IHRIFIDSMDEVHQIERIAADLGVVAPVMVRLKSGIHAGGNEYIATAHEDQKFGLSLATD 208 Query: 179 HSLYAYASTLP--GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHID 235 + A A + G+ HIGSQI E+F +A +++ D L+ G ++ ID Sbjct: 209 QAYEAVAVIKDAAHLDFRGLHSHIGSQIFGTEAFAEAARIVIDFAALLKAELGLDVPAID 268 Query: 236 VGGGLGIAYHSDHRPPSSS--------DYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 +GGG+GIAY P+S + G + +EPGR + +++ Sbjct: 269 LGGGVGIAYTGQDPVPTSPVEVARALATVVRERCAHHGLPIPHVSVEPGRSIAGPSMVML 328 Query: 288 TKV-----ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH-IHADIV 341 +V IS++ + +V +D M+D +RP LYDA + IV Sbjct: 329 YRVGVVKDISLEDGGVRRYVAIDGGMSDNIRPVLYDAVYTATLANRDPAQASSLARCRIV 388 Query: 342 GPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHI 400 G CE+GD I + + GDLL + GAYG + YN + V Sbjct: 389 GKHCESGDIIIRDIDLPADITGGDLLAVPAVGAYGYSMASNYNMLTKPGVLAVEDGSARW 448 Query: 401 IRPRMTFQELIELD 414 T L+ LD Sbjct: 449 FIRPQTVDHLLALD 462 >gi|311087329|gb|ADP67409.1| diaminopimelate decarboxylase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 415 Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 111/415 (26%), Positives = 184/415 (44%), Gaps = 31/415 (7%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ L PF+ Y I K FD ++ +A K+ SN +++ + + Sbjct: 16 RIKDLIKKYSPPFWVYDADIIYKKINLLRK-FD----VIRFAQKSCSNINILRLMKNKNV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ R A + + + + T D +D + + + + + ++ Sbjct: 71 KIDAVSLGEIER---ALLSGFKPSTNEIIFTADILDKETLLKVAKYKIPVNAGSLDMLKQ 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + R+NP KK +TG + K GI + L Sbjct: 128 LGKISPGHHVWLRINPRFGYGHSKKTNTGGENSKHGIWHPEQAIPIIKKYKLKL------ 181 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + I ++ K+ + + + I I VGGGL I Y + +P Y Sbjct: 182 -IGLHMHIGSGVNYLHLKKVSQAMIKYAFQLNQKISSISVGGGLPIPYKFNDQPIDIKKY 240 Query: 257 ASLIHQYFGNL------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + ++ +EPGRFLVA+ GIL++KV + KK +K FV++DV ND Sbjct: 241 FMLWDIARKKISKFLGEKIELEIEPGRFLVAESGILISKVWATKKMGNKNFVLVDVGFND 300 Query: 311 FMRPTLYDAYHEINYIV---NPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRPT+Y +YH I+ I ++ I + GP+CE+GD RK+ Sbjct: 301 LMRPTMYGSYHHISVIYGDDRKMNEKETIDTVVAGPLCESGDIFTQKEGGTVQTRKLPTI 360 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GD L TGAYGA S YN+R LIPEI++ + +IR R T +E++ L+ Sbjct: 361 KVGDYLIFHDTGAYGAAMSSNYNTRPLIPEILLKNNDSIVIRRRQTIEEILNLEK 415 >gi|15617037|ref|NP_240250.1| diaminopimelate decarboxylase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219682344|ref|YP_002468728.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|11386744|sp|P57513|DCDA_BUCAI RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|25290916|pir||H84980 diaminopimelate decarboxylase (EC 4.1.1.20) [imported] - Buchnera sp. (strain APS) gi|10039102|dbj|BAB13136.1| diaminopimelate decarboxylase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622077|gb|ACL30233.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086169|gb|ADP66251.1| diaminopimelate decarboxylase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086741|gb|ADP66822.1| diaminopimelate decarboxylase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 415 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 111/415 (26%), Positives = 184/415 (44%), Gaps = 31/415 (7%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ L PF+ Y I K FD ++ +A K+ SN +++ + + Sbjct: 16 RIKDLIKKYSPPFWVYDADIIYKKINLLRK-FD----VIRFAQKSCSNINILRLMKNKNV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ R A + + + + T D +D + + + + + ++ Sbjct: 71 KIDAVSLGEIER---ALLSGFKPSTNEIIFTADILDEETLLKVAKYKIPVNAGSLDMLKQ 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + R+NP KK +TG + K GI + L Sbjct: 128 LGKISPGHHVWLRINPRFGYGHSKKTNTGGENSKHGIWHPEQAIPIIKKYKLKL------ 181 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + I ++ K+ + + + I I VGGGL I Y + +P Y Sbjct: 182 -IGLHMHIGSGVNYLHLKKVSQAMIKYAFQLNQKISSISVGGGLPIPYKFNDQPIDIKKY 240 Query: 257 ASLIHQYFGNL------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + ++ +EPGRFLVA+ GIL++KV + KK +K FV++DV ND Sbjct: 241 FMLWDIARKKISKFLGEKIELEIEPGRFLVAESGILISKVWATKKMGNKNFVLVDVGFND 300 Query: 311 FMRPTLYDAYHEINYIV---NPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRPT+Y +YH I+ I ++ I + GP+CE+GD RK+ Sbjct: 301 LMRPTMYGSYHHISVIYGDDRKMNEKETIDTVVAGPLCESGDIFTQKEGGTVQTRKLPTI 360 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GD L TGAYGA S YN+R LIPEI++ + +IR R T +E++ L+ Sbjct: 361 KVGDYLIFHDTGAYGAAMSSNYNTRPLIPEILLKNNDSIVIRRRQTIEEILNLEK 415 >gi|323351012|ref|ZP_08086669.1| diaminopimelate decarboxylase [Streptococcus sanguinis VMC66] gi|322122736|gb|EFX94445.1| diaminopimelate decarboxylase [Streptococcus sanguinis VMC66] Length = 416 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 163/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITAQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KEAAGIPKVISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + G + I++ GG+GI Y D + Sbjct: 187 ALLASNTVSNDYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPDGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILIPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + + D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--PEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNIRMIRRAEKPEDYFA 407 >gi|322517488|ref|ZP_08070361.1| diaminopimelate decarboxylase [Streptococcus vestibularis ATCC 49124] gi|322123970|gb|EFX95529.1| diaminopimelate decarboxylase [Streptococcus vestibularis ATCC 49124] Length = 421 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 160/404 (39%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I + + AF +A+KA N A++K L G Sbjct: 16 LDQITAEFPTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGC 75 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D ++ EL + + I F+ + I E + Sbjct: 76 GVDCATDTELVMSNKIGFDSTAISFTSNDTRA--EEFVYARDINATINLDAYEDIFFLEE 133 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A L + + F + T I +E KFG+ Q+ YAY Sbjct: 134 AAGLPETLSLRFNPGGVFSLGTD--IMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLH 191 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G ++ I++ GG+G+ Y ++ + Sbjct: 192 AFLASNTVTNEYYPTLAAQLFELAVEIKNELGVSLDFINLSGGVGVDYTPANKQNDIAVI 251 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H F + I E GRF+ A G++VTKV+ IK + + +V +D + Sbjct: 252 GEGVHTKFDEILVPNDLGDISIYTELGRFMTAPHGLVVTKVLHIKDT-YRRYVGVDASAV 310 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +YDAYH I + NP GD D+ G +CE D A NR++ R GD L I Sbjct: 311 NLLRPAMYDAYHHITNMTNPNGDI--QVVDVTGSLCENNDKFAKNRELPEARIGDTLVIH 368 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI+ +IR T + Sbjct: 369 DTGAHGFSMGYNYNGRLRSAEILYQEDGTARMIRRAETMNDYFA 412 >gi|312862511|ref|ZP_07722753.1| putative diaminopimelate decarboxylase [Streptococcus vestibularis F0396] gi|311101916|gb|EFQ60117.1| putative diaminopimelate decarboxylase [Streptococcus vestibularis F0396] Length = 417 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 160/404 (39%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I + + AF +A+KA N A++K L G Sbjct: 12 LDQITAEFPTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D ++ EL + + I F+ + I E + Sbjct: 72 GVDCATDTELVMSNKIGFDSTAISFTSNDTRA--EEFVYARDINATINLDAYEDIFFLEE 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A L + + F + T I +E KFG+ Q+ YAY Sbjct: 130 AAGLPETLSLRFNPGGVFSLGTD--IMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G ++ I++ GG+G+ Y ++ + Sbjct: 188 AFLASNTVTNEYYPTLAAQLFELAVEIKNELGVSLDFINLSGGVGVDYTPANKQNDIAVI 247 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H F + I E GRF+ A G++VTKV+ IK + + +V +D + Sbjct: 248 GEGVHTKFDEILVPNDLGDISIYTELGRFMTAPHGLVVTKVLHIKDT-YRRYVGVDASAV 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +YDAYH I + NP GD D+ G +CE D A NR++ R GD L I Sbjct: 307 NLLRPAMYDAYHHITNMTNPNGDI--QVVDVTGSLCENNDKFAKNRELPEARIGDTLVIH 364 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI+ +IR T + Sbjct: 365 DTGAHGFSMGYNYNGRLRSAEILYQEDGTARMIRRAETMNDYFA 408 >gi|160893389|ref|ZP_02074175.1| hypothetical protein CLOL250_00939 [Clostridium sp. L2-50] gi|156864964|gb|EDO58395.1| hypothetical protein CLOL250_00939 [Clostridium sp. L2-50] Length = 421 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 88/404 (21%), Positives = 147/404 (36%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 ++++ TPF+ Y I +N AF +A+KA N +++ L G Sbjct: 11 VDEMIKKYPTPFHLYDEKGIRENARKLYQAFSWNKGFKEFFAVKATPNPTILRILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G S EL + + I+FS +E LA + G + Sbjct: 71 GTACSSLTELMMSDKLGFTGDEIMFSSNDTPAEEFVLAKKLGATINLDDFTHIDFLEK-- 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I R NP + I + K+G+ QI Y + Sbjct: 129 --TAGIPEKICCRYNPGGTFSISTTIMDNPGDAKYGMTKDQIIEAYRILKGKGVKRFGMH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G + I++ GG+G+ Y D P Sbjct: 187 AFLASNTVTNDYYPVLARTLFEVAVEIKEKTGVKLDFINLSGGVGVPYTPDKEPNDILAI 246 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + E GRF++A G L+T I K + K ++ +D Sbjct: 247 GEGVRKVYEEILVPAGMGDVALYTELGRFMLAPYGHLITTAIHEKHT-HKEYIGVDACAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + + D+ G +CE D A++R + GD+L I Sbjct: 306 NLMRPAMYGAYHHITVLGK-ENEPCDHKYDVTGSLCENNDKFAIDRMLPKIDMGDILVIH 364 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T + Sbjct: 365 DTGAHGFAMGYNYNGKLKSAEVLLCEDGSTKLIRRAETPDDYFA 408 >gi|324991301|gb|EGC23234.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK353] gi|325687122|gb|EGD29145.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK72] Length = 416 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 96/404 (23%), Positives = 162/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITDQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELIMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I + KFG+ Q+ + L K Sbjct: 127 KEAAGIPKIISCRYNPGGVFELGTSIMDNPEAAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 ALLASNTVSNGYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + + D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--SESETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNVRMIRRAEKPEDYFA 407 >gi|149189477|ref|ZP_01867761.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] gi|148836634|gb|EDL53587.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] Length = 526 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 74/459 (16%), Positives = 145/459 (31%), Gaps = 33/459 (7%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYA 58 L L +P + S + N NAF V +A Sbjct: 46 DELTTQGDDLLIGGCKATDLIEQYGSPLFVLSEDTLRNNLRRVKNAFGNYWPKPVNVMFA 105 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +K+N+N AV G G D GE+ A + I +G K I A++ G Sbjct: 106 IKSNTNFAVRAICNEEGVGGDCFGPGEVEATYIAGADPKTIALNGTVKPELAIRKAIEYG 165 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI-----------NANTHKKISTGKK 167 ++S E++ + + A + + V + +A K Sbjct: 166 YAIH-LDSYEEIEIVERIAREVKPAEKVRIAVRLKVIPEDFFNDFEPDAYPFPNFIGAMK 224 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 KFG+ + + + + G H+G + E + ++ ++ Sbjct: 225 WIKFGLLKEEAKKIINRVKEIDMFEFYGFHTHLGRFSKRPEGWDALYREYARNIIEISRE 284 Query: 228 GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC---------------KII 272 GG + + + C ++ Sbjct: 285 CGVQPFQVDLGGGWPREREPECRSKEHMMNPNTIEDYAKVVCGGMLEEFTKEGFEVPQLW 344 Query: 273 LEPGRFLVADVGILVTKVIS--IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 LEPGR++ ++G L+T V + D T+ ++D + ++ + + Sbjct: 345 LEPGRYIAGNIGTLLTSVYVVKDDQEMDYTYTMVDASTYLATLVESQESKNPVLPANKMT 404 Query: 331 GDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE 390 + +I GPIC ++ +P D+L I G Y Q+ +NS Sbjct: 405 QPLVERTTEIAGPICIPS-IWESGARMPALQPKDVLAIMDVGHYAESQASQFNSLPRPAT 463 Query: 391 IMVNGSQFHIIRPRMTFQELIELDSIPAWLQKTPKQSSE 429 ++V + +I+ T ++ +P K + + Sbjct: 464 VLVKDGEAELIKRAETVDDVFATQILPERFVKAKAEIEK 502 >gi|261367053|ref|ZP_05979936.1| diaminopimelate decarboxylase [Subdoligranulum variabile DSM 15176] gi|282571172|gb|EFB76707.1| diaminopimelate decarboxylase [Subdoligranulum variabile DSM 15176] Length = 421 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 96/414 (23%), Positives = 160/414 (38%), Gaps = 15/414 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSG 77 + + V TPF+ Y I +N + AF +A+KA N ++K L G G Sbjct: 14 QAIIADVPTPFHLYDEKGIRENARRVNAAFAWNKGFKEYFAVKATPNPYILKILQEEGCG 73 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D S EL + A I+FS + ++ A + G Y + + Sbjct: 74 VDCSSYTELLMSEACGFTGSDIMFSSNDTPVQDMQKAYELGAYINLDDLTH----VEFLQ 129 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G I R NP + I + K+G+ Q+ Y L + Sbjct: 130 QVAGIPKTICCRYNPGGVFDLGNGIMDNPGDAKYGMSEDQMAQAYTKLMALGAEEFGIHA 189 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + A L R + G I+ I++ GG+GIAY + R + Sbjct: 190 FLASNTVTDEYYPKLAGILFRLAVRLHERTGAKIKFINLSGGVGIAYRPEQRSNDIAKIG 249 Query: 258 SLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + + + + + E GR+++A G LVT V+ K + + A N Sbjct: 250 EGVRKQYEEILVPAGLGDVALFTEMGRYMLAPYGGLVTTVLHEKHIYKEYIGVDACAANL 309 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 RP +Y AYH I + + H DI G +CE D A++R + GD+L+I Sbjct: 310 M-RPAMYGAYHHITVLGKESKPCDH-KYDITGGLCENNDKFAIDRMLPKIDKGDVLFIHD 367 Query: 371 TGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIELDSIPAWLQKT 423 TGA+G YN +L E+++ +IR T ++ + +K+ Sbjct: 368 TGAHGFSMGYNYNGKLRSAEVLLKEDGSHQLIRRAETPEDYFATFDFTPFFKKS 421 >gi|288906000|ref|YP_003431222.1| diaminopimelate decarboxylase [Streptococcus gallolyticus UCN34] gi|288732726|emb|CBI14300.1| diaminopimelate decarboxylase [Streptococcus gallolyticus UCN34] Length = 414 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 101/404 (25%), Positives = 159/404 (39%), Gaps = 18/404 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+K+ TPF+ Y I + + AF +A+KA A++K L Sbjct: 11 LQKITDEFPTPFHLYDEKGIREKARALNEAFAWNKGFKEYFAVKATPTPAILKILQEENC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D +E EL + I+FS E A + G + + Sbjct: 71 GVDCATEVELLMSHKLGFT--DIMFSSNDTPAREFRYAKEIGATINLDA----YEHIAFL 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G ++ R NP I +E KFG+ Q+ + Sbjct: 125 KEVAGLPETVSLRYNPGGVFALGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKNFGIH 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G + I++ GG+G+ Y + P + Sbjct: 185 SFLASNTVTNDYYPELARQLFELAVEVKEKTGVAVSFINLSGGVGVNYRPEQEPNDIAVI 244 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ F + KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 245 GKGVHRVFDEVLIPAGLGDVKIFTELGRFMLASHGLLVTKVRHRKQT-YRTYIGVDASAV 303 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +YDAYH I + NP G D+VG +CE D A R++ R GD L I Sbjct: 304 NLMRPAMYDAYHHITNVSNPNGK--LEVVDVVGSLCENNDKFAKQRELPEARVGDTLVIH 361 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI+ +IR T ++ Sbjct: 362 DTGAHGFSMGYQYNGRLRSAEILYQEDGSARLIRRAETPEDYFA 405 >gi|260589538|ref|ZP_05855451.1| protein TabA [Blautia hansenii DSM 20583] gi|260540106|gb|EEX20675.1| protein TabA [Blautia hansenii DSM 20583] Length = 427 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 149/404 (36%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y I +N AF +A+KAN+N +I L G Sbjct: 12 LEEIIKTYPTPFHLYDEKGIRENAKAMKEAFSWNKGFKEYFAVKANANPFLINLLREYGF 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A E I+FS ++ A Q G + Sbjct: 72 GCDCSSYTELMLSEAIGCVGEDIMFSSNDTPTEDFQYAAQLGATINLDDITHIDFLEKAI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ QI + + Sbjct: 132 GKIPE---RISCRFNPGGIFEVCNGIMDNPGDAKYGMTEEQIFDAFRILKEKGSKEFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A KL + + G I I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNEYYPMLAKKLFELAVRLEKETGAKICFINLSGGVGIPYTPDQEPNDIRAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + I E GRF++ G LVT I K + K ++ LD Sbjct: 249 GEGVHRVYDEVLVPAGMGDVAIYSELGRFMMGPYGCLVTTAIHEKHT-HKDYIGLDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H D+ G +CE D A++R + + GD+L I Sbjct: 308 NLMRPAMYGAYHHITVMGKENLPLDH-KYDVTGSLCENNDKFAVDRMLPEIQKGDILVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR + Sbjct: 367 DTGAHGFAMGYNYNGKLKSAELLLKEDGSVQLIRRAEKPSDYFA 410 >gi|240140165|ref|YP_002964642.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens AM1] gi|240010139|gb|ACS41365.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens AM1] Length = 429 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 98/408 (24%), Positives = 165/408 (40%), Gaps = 14/408 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L + L LA TP + Y + + Y A G V +++KAN N AVI Sbjct: 22 GVLRVGGLPLTDLAKEFGTPLFVYDADTMRRIYRALCAALAGF-AEVDFSVKANPNPAVI 80 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G+G +I S E A+ A VP ++I+F+G GK ++D + GI ++E+ Sbjct: 81 RVFSQEGAGAEIASGAEFDAAIRAGVPPDKILFAGPGKGAADLDRVIGGGIGEIHLENRE 140 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E+ + A G +A R+NP A GK FG I + A Sbjct: 141 EIVRVAAAAERHGVHVRVALRINPGATAQGGAMRMGGKPS-PFGFDEEDIEAAIDTAEAE 199 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 P +++ G+ + G+Q + ++ + L ++ S GG + Sbjct: 200 PRLRLVGLHLFAGTQGLKADTLLGQWTYGLGLAARIASRIGRPLESIDLGGGLGIPYFSG 259 Query: 249 RPPSS--------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 D + + +++LEPGR+L G+ V +V+++K+S Sbjct: 260 DTALDLGAIRAGLPDLIATLRADPLMASARVVLEPGRYLTGPAGVYVARVLAVKESRGSR 319 Query: 301 FVILDVAMNDFMR---PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 FVI D M+ + + +VGP+C D +A + Sbjct: 320 FVITDGGMHHHLAASGNLGQIVKRDFPLAAVTDAGCERTQTAVVGPLCTPLDMLARAAPL 379 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPR 404 GDL+ + ++GAYG S T + S E++V G + IR R Sbjct: 380 PPLAEGDLVAVLQSGAYGLTASPTGFLSHPTPAEVLVEGGEAREIRAR 427 >gi|167761920|ref|ZP_02434047.1| hypothetical protein BACSTE_00263 [Bacteroides stercoris ATCC 43183] gi|167700152|gb|EDS16731.1| hypothetical protein BACSTE_00263 [Bacteroides stercoris ATCC 43183] Length = 386 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 137/370 (37%), Positives = 197/370 (53%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y T + A + V YA+KAN+N V+ + G G D V Sbjct: 11 RELRTPFYYYDTKVLRDTLSCIRTEALRYDNYSVHYAVKANANPKVLTIIRESGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA++IVF+GVGK EI+L L I+CFNVES EL+ +N+ A + G Sbjct: 71 SGGEIRAAIKAGFPADKIVFAGVGKADWEINLGLDYNIFCFNVESIPELEIINELAAAKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NP++ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KVANVAFRINPNVGAHTHANITTGLAENKFGISMEDMDHVIDVAQEMKNVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---DYAS 258 SQI + F + +L +L + I+H++VGGGLGI Y +R P + + Sbjct: 191 SQILDMGDFVALCNRVNELLDKLEARQIRIEHVNVGGGLGIDYGHPNRQPVPDFKSYFET 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + E GR +V G L+ KV+ +K+ +K F ILD M D +RP LY Sbjct: 251 YDNCLKLRSYQTLHFELGRSVVGQCGSLIAKVLYVKQGTNKQFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H I N D D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AFH---KIENITSDAPQQTYDVVGPICESSDVFGKAVDLNGVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRELP 377 >gi|298246004|ref|ZP_06969810.1| Orn/DAP/Arg decarboxylase 2 [Ktedonobacter racemifer DSM 44963] gi|297553485|gb|EFH87350.1| Orn/DAP/Arg decarboxylase 2 [Ktedonobacter racemifer DSM 44963] Length = 416 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 152/404 (37%), Gaps = 16/404 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV-CYALKANSNQAVIKTLAHLG 75 LE L TPF+ Y I AF ++ +A+KA N +++ L G Sbjct: 12 RLEALIATHPTPFHLYDEQGIRAAVRRMKRAFAWSESFTNYFAVKALPNPHILRILKEEG 71 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G+D S EL A E I+F+ E A + G + Q Sbjct: 72 LGVDCSSLPELVLAERVGFAGEEIMFTSNQTPASEYRKARELGAIINLDDISHIAYLEEQ 131 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + NA I KE K+G+ Q+ YA A + Sbjct: 132 AGLPDLLSFRYNPGPLRAGNA-----IIGDPKEAKYGLTYDQLFQAYASAKEKGVRRFGL 186 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 M ++++ A L + R G I++GGG+GI Y + Sbjct: 187 HAMLASNELNVAYFLETARMLFDLVAALSREVGITFSFINMGGGIGIPYRPEQSAFDMET 246 Query: 256 YASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + + + +I++E GR + G LVT I K K ++ LD M Sbjct: 247 FGQELQALYTQKIVANSLPPLRIVMECGRVITGPHGYLVTTAIHQK-ETYKRYIGLDACM 305 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 + MRP LY AYH I + + D+VG +CE D A++R + PGD+L I Sbjct: 306 TNLMRPALYGAYHHITVLGKEDQPANEM-YDVVGSLCENFDKFAIDRSLPEITPGDILII 364 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELI 411 TGA+G YN +L E+++ G +IR T + Sbjct: 365 HDTGAHGHAMGFNYNGKLRSAELLLREGGDIQLIRRAETLDDYF 408 >gi|312898393|ref|ZP_07757783.1| putative diaminopimelate decarboxylase [Megasphaera micronuciformis F0359] gi|310620312|gb|EFQ03882.1| putative diaminopimelate decarboxylase [Megasphaera micronuciformis F0359] Length = 417 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 93/404 (23%), Positives = 147/404 (36%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 + ++ TPF+ Y AI N AFD D +A+KA N ++K L G Sbjct: 13 IREIIKTYPTPFHIYDEEAIRANVRKLIKAFDWAKDFKEYFAVKATPNPYIMKILKAEGV 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + + I+FS E A++ G + Sbjct: 73 GADCSSLPELLLCEKVGISGDDIIFSSNDTPYQEFAKAMELGAIINIDDITMIDFLEA-- 130 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + I R NP I +E K+G+ QI A + Sbjct: 131 --NGPIPDRICMRYNPGPLLKDGNDIIGTPEESKYGLTRDQIFEAMAILKQKGVKRFGLH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + ++++ + A + + G I ID GGG+G+ Y + Sbjct: 189 TMVVSNELNANGLINTAKMMFELAVEVKERLGIYIDFIDFGGGIGLPYRPEESFVDYDVL 248 Query: 257 ASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 ++ I F + ++ E GR + G LVT I K N Sbjct: 249 SAGIKDQFEKIMVPNGLDDIRLSFECGRAITGPYGYLVTTAIHHKDIWKHYIGTDASMAN 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH + + H+ D+ G +CE D A++R + + GD+L I Sbjct: 309 LM-RPGMYGAYHHLTVLGKEEAPADHV-YDVTGSLCENCDKFAVDRPLPEIKDGDILVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMTFQELIE 412 TGA+G YN +L E++++ IR T +L Sbjct: 367 DTGAHGHSMGFNYNGKLRSAELLMHKDHSVTQIRRAETVDDLFA 410 >gi|328946843|gb|EGG40980.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1087] Length = 416 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 163/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y + + AF +A+KA N A++K L G Sbjct: 11 LAEITAQFPTPFHLYDEKGVRERARALHKAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KEAAGIPKIISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 ALLASNTVSNDYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAII 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + D D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--PDGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNVRMIRRAEKPEDYFA 407 >gi|116627185|ref|YP_819804.1| diaminopimelate decarboxylase [Streptococcus thermophilus LMD-9] gi|116100462|gb|ABJ65608.1| diaminopimelate decarboxylase [Streptococcus thermophilus LMD-9] Length = 417 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 158/404 (39%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + + AF +A+KA N A+++ L G Sbjct: 12 LNQITAEFPTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILRILKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D ++ EL + + I F+ + I E + Sbjct: 72 GVDCATDTELVMSNKVGFDSTAISFTSNDTRA--EEFVYARDINAIINLDAYEDIFFLEE 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + + + F T I +E KFG+ Q+ YAY Sbjct: 130 SAGIPETLSLRFNPGGVFLLGTD--IMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G ++ I++ GG+G+ Y ++ + Sbjct: 188 AFLASNTVTNEYYPTLAAQLFELAVEIKNELGISLDFINLSGGVGVDYTPANKQNDIAAI 247 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H F + I E GRF+ A G+LVTKV+ IK + + +V +D + Sbjct: 248 GEGVHTKFDEILVPNDLGDISIYTELGRFMTAPHGLLVTKVLHIKDT-YRRYVGVDASAV 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +YDAYH I + NP GD D+ G +CE D A NR++ R GD L I Sbjct: 307 NLLRPAMYDAYHHITNMTNPNGDI--QVVDVTGSLCENNDKFAKNRELPEARIGDTLVIH 364 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI+ +IR T + Sbjct: 365 DTGAHGFSMGYNYNGRLRSAEILYQEDGTARMIRRAETMNDYFA 408 >gi|153853278|ref|ZP_01994687.1| hypothetical protein DORLON_00673 [Dorea longicatena DSM 13814] gi|149754064|gb|EDM63995.1| hypothetical protein DORLON_00673 [Dorea longicatena DSM 13814] Length = 424 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 147/404 (36%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y + +N AF +A+KA N +I L G Sbjct: 12 LDEIIKTYPTPFHLYDEKGMRENMKALKEAFSWNKGYREYFAVKATPNPFLINILREYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A E I+FS +E LA + + Sbjct: 72 GCDCSSYTELMLSDAIGATGEDIMFSSNDTPAEEFVLADKLNAIINLDDITHIDFLEKAI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ Q+ + + Sbjct: 132 GHIPE---TISCRYNPGGMFKISNDIMDNPGDAKYGMTTEQLFEAFKILKAKGAKEFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + + G +I+ I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNEYYPMLAKVLFEVAVKLQKETGVHIKFINLSGGVGIPYKPDQEPNDIRAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++ G LVT I K + K ++ +D Sbjct: 249 GDGVRRVYEEVLVPAGMGDVAIYTEMGRFMMGPYGCLVTTAIHEKHT-HKEYIGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H D+ G +CE D A++R + GD+L I Sbjct: 308 NLMRPAMYGAYHHITVMGKEDTPCDH-KYDVTGSLCENNDKFAIDRMLPKIDMGDILVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T + Sbjct: 367 DTGAHGFSMGYNYNGKLKSAEVLLKEDGSTQLIRRAETPADYFA 410 >gi|222152576|ref|YP_002561751.1| pyridoxal-dependent decarboxylase [Streptococcus uberis 0140J] gi|222113387|emb|CAR41034.1| pyridoxal-dependent decarboxylase [Streptococcus uberis 0140J] Length = 412 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 98/410 (23%), Positives = 161/410 (39%), Gaps = 18/410 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FISKEKLEDMTSQYPTPFHLYDEAGIRQKAREVNKAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G+D +E EL + I+FS E A + G Sbjct: 65 LQEENCGVDCATEVELMMSHELGFK--DIMFSSNNTPAREYQYAQEVGATINLDA----Y 118 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I ++ KFG+ Q+ Y Sbjct: 119 EQIAYLEETSGLPEKISLRYNPGGVFALGTDIMDHPQDSKFGMTKEQLFQGYKELKAKGV 178 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + Q ++ I++ GG+G+ Y D + Sbjct: 179 KEFGIHSFLASNTVTNDYYPQLARQLFQLAVQIKEELDISLSFINLSGGIGVNYLPDQKE 238 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + F + I E GRF++A G L+T+V+ KK+ K ++ Sbjct: 239 NDIAQIGLGVKKAFEEILVPNNLGHISIYTELGRFMLAPHGHLITRVLHRKKT-YKDYIG 297 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + +RP +Y +YH I I N D D+VG +CE D A +R++ RPG Sbjct: 298 VDASAVNLLRPAMYGSYHHITNISN--PDGEVELVDVVGSLCENNDKFAKDRELPQARPG 355 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG-SQFHIIRPRMTFQELIE 412 DLL I TGA+G YN RL E+++ Q +IR T ++ Sbjct: 356 DLLVIHDTGAHGFSMGYQYNGRLRSAEMLLEESGQVRMIRRAETPEDYFS 405 >gi|306832019|ref|ZP_07465174.1| diaminopimelate decarboxylase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425945|gb|EFM29062.1| diaminopimelate decarboxylase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 438 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 102/423 (24%), Positives = 162/423 (38%), Gaps = 28/423 (6%) Query: 9 GSLHAENVS----------LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCY 57 L ++ L+K+ TPF+ Y I + + AF + Sbjct: 16 NILKIRGINMKTPFISAEELQKITDAFPTPFHLYDEKGIREKARALNKAFAWNKGFKEYF 75 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+KA A++K L G+D +E EL + I+FS E A + Sbjct: 76 AVKATPTPAILKILQEENCGVDCATEVELLMSHKLGFT--DIMFSSNDTPAREFRYAKEI 133 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G + + G ++ R NP I +E KFG+ Q Sbjct: 134 GATINLDA----YEHIAFLKEVAGLPETVSLRYNPGGVFALGTDIMDNPEESKFGMTKAQ 189 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + + + A +L + G + I++ Sbjct: 190 LIQGFKDLKAEGVKNFGIHSFLASNTVTNDYYPELARQLFELAVEVKEKTGVAVSFINLS 249 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKV 290 GG+G+ Y + P + +H+ F + KI E GRF++A G+LVTKV Sbjct: 250 GGVGVNYRPEQEPNDIAVIGKGVHRVFDEVLIPAGLGDVKIFTELGRFMLAPHGLLVTKV 309 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 K++ +T++ +D + + MRP +YDAYH I + NP G D+VG +CE D Sbjct: 310 RHRKQT-YRTYIGVDASAVNLMRPAMYDAYHHITNVSNPNGK--LEVVDVVGSLCENNDK 366 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQE 409 A R++ R GD L I TGA+G YN RL EI+ +IR T ++ Sbjct: 367 FAKRRELPEARVGDTLVIHDTGAHGFSMGYQYNGRLRSAEILYQEDGSARLIRRAETPED 426 Query: 410 LIE 412 Sbjct: 427 YFA 429 >gi|325695049|gb|EGD36952.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK150] Length = 416 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 99/404 (24%), Positives = 164/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITDQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFARQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KEAAGIPKVISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 AFLASNTVSNDYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + P G+ D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDRPMGE--TEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNVRMIRRAEKPEDYFA 407 >gi|312277664|gb|ADQ62321.1| Diaminopimelate decarboxylase [Streptococcus thermophilus ND03] Length = 417 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 159/404 (39%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I + + AF +A+KA N A++K L G Sbjct: 12 LDQITAEFPTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D ++ EL + + I F+ + I E + Sbjct: 72 GVDCATDTELVMSNKVGFDSTAISFTSNDTRA--EEFVYARDINAIINLDAYEDIFFLEE 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + L + + F T I +E KFG+ Q+ YAY Sbjct: 130 SAGLPETLSLRFNPGGVFLLGTD--IMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G ++ I++ GG+G+ Y ++ + Sbjct: 188 AFLASNTVTNEYYPTLAAQLFELAVEIKNELGISLDFINLSGGVGVDYTPANKQNDIAAI 247 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H F + I E GRF+ A G+LVTKV+ IK + + +V +D + Sbjct: 248 GEGVHTKFDEILVPNDLGDISIYTELGRFMTAPHGLLVTKVLHIKDT-YRRYVGVDASAV 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +YDAYH I + NP GD D+ G +CE D A NR++ R GD L I Sbjct: 307 NLLRPAMYDAYHHITNMTNPNGDI--QVVDVTGSLCENNDKFAKNRELPEARIGDTLVIH 364 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI+ +IR T + Sbjct: 365 DTGAHGFSMGYNYNGRLRSAEILYQEDGTARMIRRAETMNDYFA 408 >gi|55820349|ref|YP_138791.1| diaminopimelate decarboxylase [Streptococcus thermophilus LMG 18311] gi|55822239|ref|YP_140680.1| diaminopimelate decarboxylase [Streptococcus thermophilus CNRZ1066] gi|55736334|gb|AAV59976.1| diaminopimelate decarboxylase [Streptococcus thermophilus LMG 18311] gi|55738224|gb|AAV61865.1| diaminopimelate decarboxylase [Streptococcus thermophilus CNRZ1066] Length = 421 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 159/404 (39%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I + + AF +A+KA N A++K L G Sbjct: 16 LDQITAEFPTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGC 75 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D ++ EL + + I F+ + I E + Sbjct: 76 GVDCATDTELVMSNKVGFDSTAISFTSNDTRA--EEFVYARDINAIINLDAYEDIFFLEE 133 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + L + + F T I +E KFG+ Q+ YAY Sbjct: 134 SAGLPETLSLRFNPGGVFLLGTD--IMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLH 191 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G ++ I++ GG+G+ Y ++ + Sbjct: 192 AFLASNTVTNEYYPTLAAQLFELAVEIKNELGISLDFINLSGGVGVDYTPANKQNDIAAI 251 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H F + I E GRF+ A G+LVTKV+ IK + + +V +D + Sbjct: 252 GEGVHTKFDEILVPNDLGDISIYTELGRFMTAPHGLLVTKVLHIKDT-YRRYVGVDASAV 310 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +YDAYH I + NP GD D+ G +CE D A NR++ R GD L I Sbjct: 311 NLLRPAMYDAYHHITNMTNPNGDI--QVVDVTGSLCENNDKFAKNRELPEARIGDTLVIH 368 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI+ +IR T + Sbjct: 369 DTGAHGFSMGYNYNGRLRSAEILYQEDGTARMIRRAETMNDYFA 412 >gi|315611873|ref|ZP_07886792.1| diaminopimelate decarboxylase [Streptococcus sanguinis ATCC 49296] gi|315316051|gb|EFU64084.1| diaminopimelate decarboxylase [Streptococcus sanguinis ATCC 49296] Length = 419 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 101/410 (24%), Positives = 162/410 (39%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 7 FISREDLETIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 66 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + P I+FS E A + G Sbjct: 67 LQEEGCGVDCSSYVELLMSHKLDFPGSEIMFSSNNTPDQEYAYARELGATINLDA----F 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 123 EDIEHLERAAGIPEIISCRYNPGGIFELGTDIMDNPGEAKFGMTKDQLFEAFAVLKEKGA 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 183 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 242 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V KK+ +T++ Sbjct: 243 NDIAVIGEGVRKVYEEVLTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKT-YRTYLG 301 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 302 VDASAVNLMRPAMYGAYHHISNLTH--PDGPVEVVDVVGSLCENNDKFAVNRELPHTEIG 359 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 360 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 409 >gi|331082967|ref|ZP_08332087.1| hypothetical protein HMPREF0992_01011 [Lachnospiraceae bacterium 6_1_63FAA] gi|330399962|gb|EGG79620.1| hypothetical protein HMPREF0992_01011 [Lachnospiraceae bacterium 6_1_63FAA] Length = 427 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 149/404 (36%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y I +N AF +A+KAN+N +I L G Sbjct: 12 LEEIIKTYPTPFHLYDEKGIRENAKAMKEAFSWNKGFKEYFAVKANANPFLINLLREYGF 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A E I+FS ++ A Q G + Sbjct: 72 GCDCSSYTELMLSEAIGCVGEDIMFSSNDTPTEDFQYAAQLGATINLDDITHIDFLEKAI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ QI + + Sbjct: 132 GKIPE---RISCRFNPGGIFEVCNGIMDNPGDAKYGMTEEQIFDAFRILKEKGSKEFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A KL + + G I I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNEYYPMLAKKLFELAVRLEKETGAKICFINLSGGVGIPYTPDQEPNDIRAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + I E GRF++ G LVT I K + K ++ LD Sbjct: 249 GEGVHRVYDEVLVPAGMGDVAIYSELGRFMMGPYGCLVTTAIHEKHT-HKDYIGLDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H D+ G +CE D A++R + + GD+L I Sbjct: 308 NLMRPAMYGAYHHITVMGKENLTLDH-KYDVTGSLCENNDKFAVDRMLPEIQKGDILVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR + Sbjct: 367 DTGAHGFAMGYNYNGKLKSAELLLKEDGSVQLIRRAEKPSDYFA 410 >gi|307707662|ref|ZP_07644142.1| diaminopimelate decarboxylase [Streptococcus mitis NCTC 12261] gi|307616274|gb|EFN95467.1| diaminopimelate decarboxylase [Streptococcus mitis NCTC 12261] Length = 416 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 100/410 (24%), Positives = 161/410 (39%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREDLEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + P I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLNFPGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V KK+ +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKT-YRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I + + + D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHITNLTHL--EGPAEVVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLIIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|307717734|ref|YP_003873266.1| hypothetical protein STHERM_c00170 [Spirochaeta thermophila DSM 6192] gi|306531459|gb|ADN00993.1| hypothetical protein STHERM_c00170 [Spirochaeta thermophila DSM 6192] Length = 419 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 155/404 (38%), Gaps = 17/404 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLGS 76 E+L TPF+ Y I + AFD + +A+KA N ++K L G Sbjct: 13 ERLIEEFPTPFHLYDERGIRETARRLYEAFDWVPGGFKNFFAVKALPNPYILKILKEEGM 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A + E I+F+ E A + G + Sbjct: 73 GADCSSLPELVLAEKVGLSGEEIMFTSNNTPYWEYQKAWELGARINLDDITHIPYLEAHV 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + NA I +E K+G QI Y + Sbjct: 133 GIPEFICMRYNPGPLKKGNA-----IIGHPEESKYGFTREQIIEGYRLLKEKGAKRFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + ++++ A L + + G +I+ I++GGG+GI Y D + Sbjct: 188 TMVVSNELNVDYFEDTARLLFSLVAEVKEEVGVDIEFINLGGGIGIPYRPDQEAVDLYEL 247 Query: 257 ASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + I + + +I++E GR + G L+T+ I K + K F+ +D M Sbjct: 248 SRRIKAAYDEMIVRRGLYPAQIVMENGRMVTGPHGFLITRAIHRKHT-YKRFIGVDACMA 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + + D+VG +CE D A++R + PGD++ I Sbjct: 307 NLMRPGMYGAYHHITVLGKEDVPPSEV-YDVVGSLCENIDKFAIDRALPPIEPGDIIVIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L EI++ IR T + Sbjct: 366 DTGAHGHAMGFNYNGKLRSAEILLREDGSAVCIRRAETVDDYFA 409 >gi|257784319|ref|YP_003179536.1| Diaminopimelate decarboxylase [Atopobium parvulum DSM 20469] gi|257472826|gb|ACV50945.1| Diaminopimelate decarboxylase [Atopobium parvulum DSM 20469] Length = 434 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 106/405 (26%), Positives = 164/405 (40%), Gaps = 12/405 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLG 75 +LE + TPF+ Y+ I + AF +A+KA N ++K LA LG Sbjct: 11 ALEVITKTYPTPFHLYNKAEIVRRAKLLQEAFSWNTGFKEYFAVKATPNPYIVKLLAELG 70 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G D + EL A A V + I+ S T+ + A + G L TL + Sbjct: 71 CGCDCANATELTLAKACGVTGQNIMLSSNDTTVLDFARAHELGAIINLDAGGDMLTTL-E 129 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 AV + R+NP + I + KFG+ Q+ +AY T + Sbjct: 130 DAVGSTMPQVMCARLNPGGVFESQNGIIGNPDDAKFGMTEEQLFQTFAYLKTKGVTEFGL 189 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + A L + R +I ID+ GG+G+AY + P Sbjct: 190 HAFLASNAQEEDYYPNLARVLFELAVKLHRELDIHIGFIDLSGGIGVAYEPNQVEPDVLA 249 Query: 256 YASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + F I E GR+L+ G LVT+V+ K + ++ +D Sbjct: 250 IGQGVKCAFEEVLVPAGMGDVSIYTELGRWLLGPAGALVTRVLHQK-ETYRHYLGVDACA 308 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 + MRP +YDAYH I + H ++VG +CE D A NR++ GDLL+I Sbjct: 309 ANLMRPAIYDAYHHITVMGKEDAPATH-TYNVVGGLCENNDQFAKNRQLPKVAVGDLLFI 367 Query: 369 EKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIRPRMTFQELIE 412 TGA+G YN RL E +++ +IR T + Sbjct: 368 HDTGAHGFSMGYNYNGRLRSAELLLLEDGSVQLIRRAETEADYFA 412 >gi|331085004|ref|ZP_08334091.1| hypothetical protein HMPREF0987_00394 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408704|gb|EGG88169.1| hypothetical protein HMPREF0987_00394 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 423 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 150/404 (37%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++A V TPF+ Y I +N AF +A+KA N +I+ L G Sbjct: 12 LEEIAKVYPTPFHIYDERGIRENVRALKEAFSWNKGYKEYFAVKATPNPFLIQILREYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A E I+FS +E A + G + Sbjct: 72 GCDCSSYTELMMSEAIGAVGEDIMFSSNATPAEEFVYADKLGGIINLDDFTHIDFLEKAI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ Q+ + Sbjct: 132 GHIPE---TISCRYNPGGLFQISNDIMDNPGDAKYGMTTEQLFDAFRILKEKGAKHFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + + G +I+ I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNEYYPMLAKVLFEVAVKLQKETGVHIKFINLSGGIGIPYRPDQEPNDIHAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++ G LVT+ I K + K ++ D Sbjct: 249 GEGVRKVYEEVLVPAGMGDVAIYTELGRFMMGPYGALVTRAIHEKHT-HKEYIGCDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H D+ G +CE D A++R + GDLLYI Sbjct: 308 NLMRPAMYGAYHHITVMGKEDAPCDH-KYDVTGSLCENNDKFAIDRMLPKIDIGDLLYIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T + Sbjct: 367 DTGAHGFAMGYNYNGKLKSAELLLKEDGSVQMIRRAETPADYYA 410 >gi|29346784|ref|NP_810287.1| diaminopimelate decarboxylase [Bacteroides thetaiotaomicron VPI-5482] gi|253572240|ref|ZP_04849643.1| diaminopimelate decarboxylase [Bacteroides sp. 1_1_6] gi|298386569|ref|ZP_06996125.1| diaminopimelate decarboxylase [Bacteroides sp. 1_1_14] gi|29338681|gb|AAO76481.1| diaminopimelate decarboxylase [Bacteroides thetaiotaomicron VPI-5482] gi|251838015|gb|EES66103.1| diaminopimelate decarboxylase [Bacteroides sp. 1_1_6] gi|298260946|gb|EFI03814.1| diaminopimelate decarboxylase [Bacteroides sp. 1_1_14] Length = 386 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 139/370 (37%), Positives = 196/370 (52%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 +QTPFY Y T + V YA+KAN+N V+ + G G D V Sbjct: 11 RTLQTPFYYYDTKVLRDTLSAINQEVAKYPSYSVHYAVKANANPKVLTIIRESGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA +IVF+GVGK EI+L L+ GI+CFNVES EL+ +N+ A + Sbjct: 71 SGGEIRAAVRAGFPANKIVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQN 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KIANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDRVIDVALEMKNVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP---PSSSDYAS 258 SQI + F + +L +L + ++HI+VGGGLGI Y +R S +A+ Sbjct: 191 SQILDMGDFIALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQSVPDFKSYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L++KV+ +K+ K F ILD M D +RP LY Sbjct: 251 YAGQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTKKKFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH + N + D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AYH---KMENITSEEPVEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRELP 377 >gi|325696353|gb|EGD38244.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK160] Length = 416 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 163/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITDQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAEQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KEAAGIPKIISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 ALLASNTVSNDYYPELAHQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + + D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--PEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDDNVRMIRRAEKPEDYFA 407 >gi|289582392|ref|YP_003480858.1| diaminopimelate decarboxylase [Natrialba magadii ATCC 43099] gi|289531945|gb|ADD06296.1| diaminopimelate decarboxylase [Natrialba magadii ATCC 43099] Length = 411 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 100/399 (25%), Positives = 186/399 (46%), Gaps = 7/399 (1%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L LA TP Y +++NY F++AF D V YA KA++ +AV++ + G Sbjct: 20 RLASLAEEYDTPLYVTDLDRVKENYTRFASAFP--DAEVMYAAKAHTGKAVLEAVLEAGG 77 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 ++ + GEL+R++ A + ++ V ++D A + R Sbjct: 78 EIECAAWGELQRSIDAGADPNTLQYTAVNPPDHDLDYATDLAAENPGLTITIGATDTLDR 137 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G IA R+NP I H+K+ + KFGIP ++ + + G+ Sbjct: 138 LAERGYDGRIAIRINPGIGTGHHEKV-ATGADAKFGIPYDRVPEVADRV--REEFDLVGL 194 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H GS + + R R +++ +DVGGG G+ Y D P Sbjct: 195 HAHAGSGVLTEGLEEHCRAIERVGEMARRVGDEDLEFVDVGGGYGVPYREDDEPLDLEKT 254 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 ++++ G+L+ + LEPGR++VAD +++++V +IK++ D T V +D ++ +RP + Sbjct: 255 SNMVRDAVGDLEATLKLEPGRYVVADASVILSEVNTIKEAPDTTVVGIDASLATLIRPAM 314 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 + +YH + + A DR + GP+C + D A +R +A P D++ I G+YG Sbjct: 315 FGSYHPMYNVS--APDREPHEVTVGGPVCTSADVFAHDRPVARPEREDIIAIGNAGSYGY 372 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + ++S+ E+ + + ++R R T ++ ++ Sbjct: 373 ELASQFHSQPRPAEVALENGEARVVRRRETLDDVTRVEQ 411 >gi|325978967|ref|YP_004288683.1| diaminopimelate decarboxylase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178895|emb|CBZ48939.1| Diaminopimelate decarboxylase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 414 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 101/404 (25%), Positives = 159/404 (39%), Gaps = 18/404 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+K+ TPF+ Y I + + AF +A+KA A++K L Sbjct: 11 LQKITDAFPTPFHLYDEKGIREKARALNKAFAWNKGFKEYFAVKATPTPAILKILQEENC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D +E EL + I+FS E A + G + + Sbjct: 71 GVDCATEVELLMSHKLGFT--DIMFSSNDTPAREFRYAKEIGATINLDA----YEHIAFL 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G ++ R NP I +E KFG+ Q+ + Sbjct: 125 KEVAGLPETVSLRYNPGGVFALGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKNFGIH 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G + I++ GG+G+ Y + P + Sbjct: 185 SFLASNTVTNDYYPELARQLFELAVEVKEKTGVAVSFINLSGGVGVNYRPEQEPNDIAVI 244 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ F + KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 245 GKGVHRVFDEVLIPAGLGDVKIFTELGRFMLAPHGLLVTKVRHRKQT-YRTYIGVDASAV 303 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +YDAYH I + NP G D+VG +CE D A R++ R GD L I Sbjct: 304 NLMRPAMYDAYHHITNVSNPNGK--LEVVDVVGSLCENNDKFAKQRELPEARVGDTLVIH 361 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI+ +IR T ++ Sbjct: 362 DTGAHGFSMGYQYNGRLRSAEILYEEDGSARLIRRAETPEDYFA 405 >gi|306824471|ref|ZP_07457817.1| diaminopimelate decarboxylase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433258|gb|EFM36228.1| diaminopimelate decarboxylase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 420 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 102/421 (24%), Positives = 163/421 (38%), Gaps = 20/421 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 7 FISREDLETIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 66 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + P I+FS E A + G Sbjct: 67 LKEEGCGVDCSSYVELLMSYKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDA----F 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ +Q+ +A Sbjct: 123 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKNQLFEAFAILKEKGA 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 183 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 242 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V KK+ + ++ Sbjct: 243 NDIAMIGEGVRKVYEEVLTPADLGQVKIFTELGRFMLAPHGALVTRVTHKKKT-YRAYLG 301 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I + + D D+VG +CE D A+NR++ G Sbjct: 302 VDASAVNLMRPAMYGAYHHITNLTH--PDGPIEVVDVVGSLCENNDKFAVNRELPHTEIG 359 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE----LDSIPA 418 DLL I TGA+G YN++L EI+ + IR ++ D P Sbjct: 360 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFATLYGFDFEPD 419 Query: 419 W 419 Sbjct: 420 H 420 >gi|149187276|ref|ZP_01865574.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] gi|148838812|gb|EDL55751.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] Length = 541 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 80/454 (17%), Positives = 153/454 (33%), Gaps = 33/454 (7%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANS 63 L L +P + S + N AF V +A+K+N+ Sbjct: 51 KGDDLLIGGCKANDLIEQYGSPLFVLSEDTLRGNLRRVKAAFGNYWPKPVNVMFAIKSNT 110 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N AV G G D GE+ A + I +G K I A++ G Sbjct: 111 NFAVRAICNEEGVGGDCFGPGEVEATHIAGADPKTIALNGTVKPELAIRKAIEYGYAIH- 169 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDI-----------NANTHKKISTGKKEDKFG 172 ++S E++ + + A + + + V + +A K KFG Sbjct: 170 LDSYEEIEIVERIAREVKPEDKVRIAVRLKVLPDDFFDNFSPDAYPFPDFKGAMKWIKFG 229 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-DLTQQLRSNGHNI 231 + + + + + G H+G + ++ D+ + R+ Sbjct: 230 LLREEAKKIVNRVKEIDIFEFYGFHTHLGRFSKDPAGWDALYRQYAKDVIEISRACDVQP 289 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ--------------CKIILEPGR 277 +D+GGG + R A+ I Y + ++ LEPGR Sbjct: 290 FQVDLGGGWPREREPECRSKEHMMNANTIEDYAKVVCAGMLDEFNRAGFDIPQLWLEPGR 349 Query: 278 FLVADVGILVTKVIS--IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH 335 ++ ++G L+T V + D T+ ++D + ++ + + + Sbjct: 350 YIAGNIGTLLTSVYVVKDDQEMDYTYTMVDASTYLATLVESQESKNPVLPANKMTQPVVA 409 Query: 336 IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 +I GPIC + +P D+L I G Y Q+ +NS ++V Sbjct: 410 KTTEIAGPICIPS-IWESGATMPELQPKDVLAIMDVGHYAESQASQFNSLPRPATVLVKD 468 Query: 396 SQFHIIRPRMTFQELIELDSIPAWLQKTPKQSSE 429 Q +I+ T +++ +P K + + Sbjct: 469 GQSELIKRAETVEDVFATQILPERFIKAKAELEK 502 >gi|254374911|ref|ZP_04990392.1| diaminopimelate decarboxylase [Francisella novicida GA99-3548] gi|151572630|gb|EDN38284.1| diaminopimelate decarboxylase [Francisella novicida GA99-3548] Length = 394 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 139/399 (34%), Positives = 206/399 (51%), Gaps = 11/399 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYA 58 M+ + F+ + E +S L TP Y Y +E +L + D + + YA Sbjct: 1 MNKYIIFDNTKLIEYISKNSLI----TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYA 56 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN N ++ G G+D VS GE++RAL V ++ IVF+GVGK EI+LA+ + Sbjct: 57 IKANHNPKIVDIAKKYGMGIDCVSGGEIKRALEQKVDSQHIVFAGVGKADWEIELAIDND 116 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ FN ES E++ +NQ A KK I RVNP+I+A TH ISTG+ +DKFGI I Sbjct: 117 IFAFNSESLEEIQVINQIAQRKNKKVNICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDI 176 Query: 179 HSLYAYAS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + I G+ H+GSQI + F + + L+ N NI+HI+ G Sbjct: 177 LNWLKDEYRNFANINIIGLHYHVGSQILNYQVFQSLAITTNEHIRLLKQNDINIKHINFG 236 Query: 238 GGLGIAYHSDHRPP---SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GGLGI Y + + P +A + + + E GR LV G+LV++V+ K Sbjct: 237 GGLGIDYQNPQQNPIVDFDGYFARFREFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNK 296 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + FVI+D M + +RP LY A H+I +++ ++ H IVGPICE+ D A Sbjct: 297 VTQGTHFVIIDAGMTELIRPALYQAQHKIAALIDENINQ-KQHYHIVGPICESSDVFAKY 355 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 ++ + GDLL I GAYG V + YN R + E + Sbjct: 356 YQLPKLKRGDLLAIYSAGAYGKVLASEYNLRPSVQEYFI 394 >gi|294495567|ref|YP_003542060.1| diaminopimelate decarboxylase [Methanohalophilus mahii DSM 5219] gi|292666566|gb|ADE36415.1| diaminopimelate decarboxylase [Methanohalophilus mahii DSM 5219] Length = 420 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 154/404 (38%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N AF + YA+KA N ++K L + G Sbjct: 13 LQEITEEYPTPFHLYDEKGILENVEKLKEAFGILEGFQEYYAVKALPNPYILKILKNKGF 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A A + E I+FS +E A + G + Sbjct: 73 GADCSSLPELVLAEKAGIVGENIMFSSNDTPAEEFVKAKELGAIINLDDISHIDYLEKHA 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 ++ K ++ K+G Q+ Y + + Sbjct: 133 SLPEMICFRYNPGAL-----KKGNKFIGNPEDAKYGFTREQLFEGYKKLADKGVKRFGIH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M +++D A L + + G + ++GGG+GI Y D P Sbjct: 188 TMVASNELDPTYFIETARILFEVIADISKELGIKFEFANLGGGIGIPYEPDQEPVPYDVI 247 Query: 257 ASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 A + + + + KI LE GR + G L++KV +K + K F +D M Sbjct: 248 AKGVKEEYDKIISANGLDPLKIYLECGRVITGPYGYLISKVRHLKHT-YKDFAGMDATMA 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I H D+ G +CE D A++RK+ GD+L + Sbjct: 307 NLMRPGVYGAYHHITVPGKENQPHDH-TYDVTGSLCENNDKFAIDRKLPEIEIGDILAMH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L EI++ IR T ++ Sbjct: 366 DTGAHGHAMGFNYNGKLRSAEILLREDGSTVQIRRAETMEDYFA 409 >gi|291522849|emb|CBK81142.1| Diaminopimelate decarboxylase [Coprococcus catus GD/7] Length = 426 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 90/404 (22%), Positives = 145/404 (35%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N AF +A+KA N A+++ + G Sbjct: 12 LDEIVKKYPTPFHLYDEKGIRENARKVYKAFSWNKGFKEYFAVKATPNPAILQIMKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GLD ++ EL A A ++FS +E A G+ + Sbjct: 72 GLDCATKVELMMAKACGFTGHDVMFSSNVTPANEYAYAKDMGVIINFDDITHLKYFEE-- 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + R N + I E K+G Q+ + Y + Sbjct: 130 -NVGEFPETVCCRFNTGGDFKISTAIMDVPGEAKYGFTREQLTEGFKYLKSKGVKHFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + A L + + G +I+ I++ GG+G+AY D P Sbjct: 189 AFLASNTKTNDYYPALAKILFKTAVELHEETGADIKFINLSGGVGVAYSPDETPNDIEVI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + I E GRF++A G L+ I K + + A N Sbjct: 249 GEGVHKVYDEILVPAGMGDVAIFTEMGRFMLAPYGHLIATAIHEKHIFKEYIGLDACAAN 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I H+ D+ G +CE D A+NR + GD + I Sbjct: 309 LM-RPAIYGAYHHITVAGKENEPCDHM-YDVTGGLCENSDKFAVNRMLPKIDMGDYIIIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T + Sbjct: 367 DTGAHGFSMGYNYNGKLRSAEVLLKEDGSTELIRRAETPMDYFA 410 >gi|293364735|ref|ZP_06611452.1| diaminopimelate decarboxylase [Streptococcus oralis ATCC 35037] gi|291316185|gb|EFE56621.1| diaminopimelate decarboxylase [Streptococcus oralis ATCC 35037] Length = 420 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 101/410 (24%), Positives = 161/410 (39%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 7 FISREDLETIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 66 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + P I+FS E A + G Sbjct: 67 LKEEGCGVDCSSYVELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDA----F 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 123 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 183 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 242 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V KK+ +T++ Sbjct: 243 NDIAVIGEGVRKVYEEVLTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKT-YRTYLG 301 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I + + D D+VG +CE D A+NR++ G Sbjct: 302 VDASAVNLMRPAMYGAYHHITNLTH--PDGPVEVVDVVGSLCENNDKFAVNRELPHTEIG 359 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 360 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKTRQIRRAERPEDYFA 409 >gi|262283244|ref|ZP_06061011.1| diaminopimelate decarboxylase [Streptococcus sp. 2_1_36FAA] gi|262261496|gb|EEY80195.1| diaminopimelate decarboxylase [Streptococcus sp. 2_1_36FAA] Length = 416 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 96/404 (23%), Positives = 163/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITAQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KEAAGIPKVISCRYNPGGVFELETSIMDNPEEAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 ALLASNTVSNDYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEKNDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + + KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILIPAGLGKVKIYTELGRFMLAPFGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + + D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--PEGETEIVDVVGSLCENNDKFAINRPLPISQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEEDGNVRMIRRAERPEDYFA 407 >gi|332358336|gb|EGJ36162.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK355] Length = 416 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 161/404 (39%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITSQFPTPFHLYDEKGIRERARALHKAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KEAAGIPKIISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + G + I++ GG+GI Y D + Sbjct: 187 ALLASNTVSNDYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPDGEENDIAVI 246 Query: 257 ASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + I E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGEVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + D D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--PDGETEIVDVVGSLCENNDKFAINRSLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNVRMIRRAEKPEDYFA 407 >gi|331265652|ref|YP_004325282.1| diaminopimelate decarboxylase [Streptococcus oralis Uo5] gi|326682324|emb|CBY99941.1| diaminopimelate decarboxylase [Streptococcus oralis Uo5] Length = 418 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 101/410 (24%), Positives = 161/410 (39%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FISREDLETIVAEFPTPFHLYDEKGIREKARAVNRAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + P I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFPGSEIMFSSNNTPDKEYAYAHELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPKIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAVLKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V KK+ +T++ Sbjct: 241 NDIAVIGEGVRKVYEEVLTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKT-YRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHITNLTH--PDGPVEVVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKTRQIRRAERPEDYFA 407 >gi|146319362|ref|YP_001199074.1| diaminopimelate decarboxylase [Streptococcus suis 05ZYH33] gi|146321567|ref|YP_001201278.1| diaminopimelate decarboxylase [Streptococcus suis 98HAH33] gi|253752391|ref|YP_003025532.1| pyridoxal-dependent decarboxylase [Streptococcus suis SC84] gi|253754217|ref|YP_003027358.1| pyridoxal-dependent decarboxylase [Streptococcus suis P1/7] gi|253756151|ref|YP_003029291.1| pyridoxal-dependent decarboxylase [Streptococcus suis BM407] gi|145690168|gb|ABP90674.1| putative diaminopimelate decarboxylase [Streptococcus suis 05ZYH33] gi|145692373|gb|ABP92878.1| putative diaminopimelate decarboxylase [Streptococcus suis 98HAH33] gi|251816680|emb|CAZ52321.1| pyridoxal-dependent decarboxylase [Streptococcus suis SC84] gi|251818615|emb|CAZ56449.1| pyridoxal-dependent decarboxylase [Streptococcus suis BM407] gi|251820463|emb|CAR47175.1| pyridoxal-dependent decarboxylase [Streptococcus suis P1/7] gi|292558994|gb|ADE31995.1| putative diaminopimelate decarboxylase [Streptococcus suis GZ1] gi|319758796|gb|ADV70738.1| putative diaminopimelate decarboxylase [Streptococcus suis JS14] Length = 415 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 94/404 (23%), Positives = 154/404 (38%), Gaps = 18/404 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE + TPF+ Y I + + AF +A+KA A++K L G Sbjct: 12 LENITEQFPTPFHLYDEKGIREKARALNAAFSWNKGFKEYFAVKATPTPAILKILQEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D ++ E+ + I+F+ E A + G + + Sbjct: 72 GVDCATDVEVLMSEKLGFK--DIMFTSNDTQAQEFVYARKVGATINLDA----YEHIEFL 125 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G + R NP + I +E KFG+ Q+ Y L + Sbjct: 126 KNVAGIPETVCLRYNPGGVFSLGTDIMDHPEESKFGMTKDQLMKGYKELKELGVKQFGIH 185 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G + I++ GG+G+ Y + P + Sbjct: 186 AFLASNTVTNDYYPVLARQLFELALEIREETGVTLDFINLSGGIGVNYRPEQEPNDIAVI 245 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + KI E GRF++A G L+TKV+ K +T++ +D + Sbjct: 246 GEGVRKVYEEILTPAGMGHVKIFTELGRFMLAPHGHLITKVLHRK-ETYRTYIGVDASAA 304 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP Y AYH I I D D+ G +CE D A+NR++ GD L I Sbjct: 305 NLMRPAFYGAYHHITNITR--PDAPIEVVDVAGSLCENNDKFAVNRELPRVEVGDTLVIH 362 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 +GA+G YN RL EI++ +IR T ++ Sbjct: 363 DSGAHGFSMGYNYNGRLRSSEILLQEDGTARMIRRAETPEDYFA 406 >gi|318060098|ref|ZP_07978821.1| putative diaminopimelate decarboxylase [Streptomyces sp. SA3_actG] gi|318076257|ref|ZP_07983589.1| putative diaminopimelate decarboxylase [Streptomyces sp. SA3_actF] Length = 439 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 119/418 (28%), Positives = 191/418 (45%), Gaps = 15/418 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V L A TP Y + + AF V YA KA +A+ Sbjct: 23 DGDVRVGGVPLTSAAERYGTPLYVLDEDQVRARARAYRAAFPDAG--VHYAAKAFLCRAL 80 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ L GLD+ S GEL A+AA PA+R++ G K+ ++ AL+ G+ ++ Sbjct: 81 VRWLDEEDIGLDVCSAGELELAVAAGFPADRVLLHGNAKSPRDLASALRLGVGRVVLDGV 140 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ L ++ + RV P I+A H K+ TG ++ KFG+ + + +A A Sbjct: 141 GEITRLAALVPPGERQ-RVLVRVVPGISAGHHDKVRTGDEDQKFGLSLTDGSAQHAVARV 199 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L P ++++G+ HIGSQI +++ + A + L L ++ + ID+GGG +A Sbjct: 200 LATPRLELTGLHCHIGSQIAEVKPYLAAQRRLLGLRARIAETYGVVLPEIDLGGGHAVAQ 259 Query: 245 HSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 R +D A + G + +++LEPGR LVA G+ V +V+++K++A Sbjct: 260 RPGERGIDLTDLARRLRAELAESCRAAGLPEPRLLLEPGRALVARAGVAVYRVLAVKRTA 319 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + FV +D M D RP LY A + + H D+VG CE GD +A + Sbjct: 320 HRVFVAVDGGMGDNPRPALYGAPCVPRLVGRVSTAAPH-RVDLVGRHCEAGDVLAPAVPL 378 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 RPGDL+ GAY + YN P I ++ R +L D Sbjct: 379 PADIRPGDLVATPVAGAYQLSMASAYNLHGRPPLIATREGTPRLLIRREEPDDLWLRD 436 >gi|315187350|gb|EFU21106.1| diaminopimelate decarboxylase [Spirochaeta thermophila DSM 6578] Length = 419 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 93/403 (23%), Positives = 147/403 (36%), Gaps = 15/403 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLGS 76 E+L TPF+ Y I + AFD + +A+KA N ++K L G Sbjct: 13 ERLIEEFPTPFHLYDERGIRETARRLYEAFDWVPGGFKNFFAVKALPNPYILKILKEEGM 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A + E I+F+ E A G + Sbjct: 73 GADCSSLPELVLAEKVGLSGEEIMFTSNNTPYWEYQKAWDLGARINLDDITHISYLEAHV 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + NA I +E K+G QI Y + Sbjct: 133 GIPEFICMRYNPGPLKKGNA-----IIGHPEESKYGFTREQIIEGYRLLKEKGAKRFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + ++++ A L + + G +I+ I++GGG+GI Y D + Sbjct: 188 TMVVSNELNVDYFEDTARLLFSLVAEVKEEVGVDIEFINMGGGIGIPYRPDQEAVDLYEL 247 Query: 257 ASLIHQYFGNLQCKIILEPGRF------LVADVGILVTKVISIKKSADKTFVILDVAMND 310 + I + + + L P R +V + +K K F+ +D M + Sbjct: 248 SRRIKAAYDEMIVRRGLYPARIVMENGRMVTGPHGFLITRAIHRKHTYKRFIGVDACMAN 307 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP +Y AYH I + + D+VG +CE D A++R + PGD++ I Sbjct: 308 LMRPGMYGAYHHITVLGKEDVPPSDV-YDVVGSLCENIDKFAIDRALPPIEPGDIIVIHD 366 Query: 371 TGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L EI++ IR T + Sbjct: 367 TGAHGHAMGFNYNGKLRSAEILLREDGSAVCIRRAETVDDYFA 409 >gi|239628236|ref|ZP_04671267.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518382|gb|EEQ58248.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 422 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 151/404 (37%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPFY Y I +N AF +A+KA N ++ L +G Sbjct: 12 LKEIEKTYPTPFYLYDEKGIRENAAKLKQAFAWNKGYKEYFAVKATPNPFLLNLLKEMGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A I+FS +E A + G + Sbjct: 72 GTDCSSMTELMMSKACGFNGHDIMFSSNDTPPEEFAYAEKLGAIINLDDITHIECLEQ-- 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ QI + Sbjct: 130 -TLGYIPETISCRYNPGGVFKVSNDIMDNPGDSKYGMTTEQIFQAFKMLKDKGAKHFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G +++ I++ GG+GI Y D P Sbjct: 189 AFLASNTVTVEYYPMLAKILFELAVKLQEETGAHVEFINLSGGIGIPYRPDQEPNDILAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++ G LVTK I K + K +V +D Sbjct: 249 GDGVRKVYEEVLVPAGMDDVAICTELGRFMMGPYGALVTKAIHEKHT-HKEYVGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H+ D+VG +CE D A++R + R GDLL+I Sbjct: 308 NLMRPAMYGAYHHITVMGKEDEPCGHM-YDVVGSLCENNDKFAIDRMLPEIRKGDLLFIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T ++ Sbjct: 367 DTGAHGFAMGYNYNGKLKSAELLLKQDGSVEMIRRAETPEDYFA 410 >gi|157150578|ref|YP_001450955.1| diaminopimelate decarboxylase [Streptococcus gordonii str. Challis substr. CH1] gi|157075372|gb|ABV10055.1| diaminopimelate decarboxylase [Streptococcus gordonii str. Challis substr. CH1] Length = 416 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 163/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LDEITAQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KEVAGIPKVISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 ALLASNTVSNNYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + + KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGKVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + + AD+VG +CE D A+NR + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--PEGETEIADVVGSLCENNDKFAINRPLPISEIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEEDGNVRMIRRAERPEDYFA 407 >gi|290968322|ref|ZP_06559864.1| putative diaminopimelate decarboxylase [Megasphaera genomosp. type_1 str. 28L] gi|290781681|gb|EFD94267.1| putative diaminopimelate decarboxylase [Megasphaera genomosp. type_1 str. 28L] Length = 417 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 148/404 (36%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLGS 76 ++ + TPF+ Y A+ N F AF +A+KA N ++K L G Sbjct: 13 IQHIIADYPTPFHIYDEQAMIDNVRQFLRAFSWAPSFKEYFAVKATPNPYIMKLLKAEGV 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + IVFS E AL G + Sbjct: 73 GADCSSMAELMLCEKVGITGRDIVFSSNDTPYAEYQKALAMGALINLDDISMIAYLEQ-- 130 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I R NP I +E K+G+ QI + Sbjct: 131 --HASLPERICARYNPGPLLQEGNAIIGKPEEAKYGMTREQIFEAFRILQAKGVRHFGLH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + +++ H A + + G ++ ID GGG+G+ Y + S + Sbjct: 189 TMVVSNELAVQGLIHTAKMMFELAADVQKHTGITVEFIDFGGGIGLPYRPEESFVSYDEL 248 Query: 257 ASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + I Q+F + + E GR + G LVT I K + + N Sbjct: 249 SQGIRQHFETIMKPHGLGQVQLAFECGRAITGPYGYLVTTAIHHKHIWKEYIGVDACMAN 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I+ + + HI DI G +CE D A++R + GD+L I Sbjct: 309 LM-RPGMYGAYHHISVMGKEHLPKDHI-YDISGSLCENCDKFAVDRALPEIEDGDILVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ + IR T ++L Sbjct: 367 DTGAHGHSMGFNYNGKLRSAELLLQKDGKVRQIRRAETLEDLFA 410 >gi|323483857|ref|ZP_08089234.1| diaminopimelate decarboxylase [Clostridium symbiosum WAL-14163] gi|323692859|ref|ZP_08107085.1| diaminopimelate decarboxylase [Clostridium symbiosum WAL-14673] gi|323402811|gb|EGA95132.1| diaminopimelate decarboxylase [Clostridium symbiosum WAL-14163] gi|323503088|gb|EGB18924.1| diaminopimelate decarboxylase [Clostridium symbiosum WAL-14673] Length = 421 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 150/404 (37%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TP++ Y I +N + AF +A+KA N +I L GS Sbjct: 12 LKEINETYPTPYHLYDEKGIRENAERLNKAFAWNKGFREYFAVKATPNPFIIDILKKTGS 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A A E+I+FS +E LA + G + Sbjct: 72 GADCSSLTELMMAKAMKFEGEKIMFSSNDTPPEEFKLADELGAIINLDDFTHIDFLEKTI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ Q+ + Sbjct: 132 GHIPE---TISCRYNPGGLFKISNDIMDNPGDSKYGMTTEQLFEAFKVLKAKGAKYFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G +I+ I++ GG+GI Y P Sbjct: 189 AFLASNTVTNEYYPMLAKILFEVAVKLKEETGADIRFINLSGGVGIPYRPGQEPNDIFAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + + E GR+++ G LVT I K + K ++ +D Sbjct: 249 GEGVRKVYEEVLVPAGMGEVALYTELGRYMLGPYGCLVTTAIHEKHT-HKEYIGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H D+ G +CE D A++R + GD+L I Sbjct: 308 NLMRPAMYGAYHHITVMGKEDRPCDH-KYDVAGSLCENNDKFAIDRMLPKVDIGDILVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T ++ Sbjct: 367 DTGAHGFSMGYNYNGKLKSAELLLKEDGSVQMIRRAETPEDYFA 410 >gi|60682355|ref|YP_212499.1| putative diaminopimelate decarboxylase [Bacteroides fragilis NCTC 9343] gi|60493789|emb|CAH08579.1| putative diaminopimelate decarboxylase [Bacteroides fragilis NCTC 9343] Length = 387 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 136/370 (36%), Positives = 197/370 (53%), Gaps = 6/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TPFY Y T + + V YA+KAN+N V+ + G G D V Sbjct: 11 RELPTPFYYYDTKVLRDTLACVNREVARYDNFSVHYAVKANANPKVLTIIRESGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA +IVF+GVGK EIDL L I+CFNVES EL+ +N+ A + G Sbjct: 71 SGGEIRAAIKAGFPAGKIVFAGVGKADWEIDLGLDYDIFCFNVESVPELEVINELAAAKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NP++ A+TH I+TG E+KFGI +H + + A L VK G+ HIG Sbjct: 131 KVANVAFRINPNVGAHTHANITTGLAENKFGISMHDMDKVIDVALELKHVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS---SDYAS 258 SQI + F + +L +L + ++HI+VGGGLGI Y +R P + + Sbjct: 191 SQILDMGDFIALCNRVNELQDKLEARHILVEHINVGGGLGIDYDHPNRQPIPDFADYFRT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + E GR + G L++KV+ +K+ +K F ILD M D +RP LY Sbjct: 251 YDEHLKLRPHQTLHFELGRAITGQCGSLISKVLYVKQGTNKQFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H++ + + D + D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AHHKMENLTSQ--DPVVETYDVVGPICESSDVFGKAVDLNKVKRGDLIALRSAGAYGEIM 368 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 369 ASGYNCRELP 378 >gi|270292095|ref|ZP_06198310.1| conserved hypothetical protein [Streptococcus sp. M143] gi|270279623|gb|EFA25465.1| conserved hypothetical protein [Streptococcus sp. M143] Length = 418 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 102/421 (24%), Positives = 165/421 (39%), Gaps = 20/421 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FISREDLETIVAEFPTPFHLYDEKGIREKARAVNKAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + ++FS E A + G + Sbjct: 65 LKEEGCGVDCSSYVELLMSHKLGFAGSEMMFSSNNTPDKEYAYARELGATINLDA----I 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKAQLFEAFAVLKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + +G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKSGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G+LVTKV KK+ +T++ Sbjct: 241 NDIAVIGEGVRKVYEEVLTPAGLGQVKIFTELGRFMLAPHGVLVTKVTHKKKT-YRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHITNLTH--PDGPVEVVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE----LDSIPA 418 DLL I TGA+G YN++L EI+ + IR ++ D P Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFATLYGFDFEPD 417 Query: 419 W 419 Sbjct: 418 H 418 >gi|182684912|ref|YP_001836659.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CGSP14] gi|182630246|gb|ACB91194.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CGSP14] Length = 416 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 100/410 (24%), Positives = 160/410 (39%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ YH D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYHPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHISNVTH--PDGPAEVVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRAAEILYTEEGKARQIRRAERPEDYFA 407 >gi|254562604|ref|YP_003069699.1| ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens DM4] gi|254269882|emb|CAX25860.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens DM4] Length = 429 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 97/408 (23%), Positives = 167/408 (40%), Gaps = 14/408 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L + L +LA TP + Y + + Y A G V +++KAN N AVI Sbjct: 22 GVLRVGGLPLTELAKDFGTPLFVYDADTMRRTYRALCAALAGF-AEVDFSVKANPNPAVI 80 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G+G +I S E A+ A VP E+I+F+G GK ++D + GI ++E+ Sbjct: 81 RVFSQEGAGAEIASGAEFDAAIRAGVPPEKILFAGPGKGAADLDRVIGGGIGEIHLENRE 140 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E+ + A G + +A R+NP A GK FG I + Sbjct: 141 EIVRVAAAAERHGVRVRVALRINPGATAQGGAMRMGGKPS-PFGFDEEDIEAAIDIVEAA 199 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 P +++ G+ + G+Q + ++ + L ++ + GG + Sbjct: 200 PRLRLVGLHLFAGTQGLKADTLLGQWSYGLGLAARIANRIGRPLETIDLGGGLGIPYFSG 259 Query: 249 RPPSS--------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 D + + +++LEPGR+L G+ V +V+++K+S Sbjct: 260 DTALDLGAIRAGLPDLIATLRADPKLASARVVLEPGRYLTGPAGVYVARVLAVKESRGSR 319 Query: 301 FVILDVAMNDFMR---PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 FVI D M+ + + +VGP+C D +A + Sbjct: 320 FVITDGGMHHHLAASGNLGQIVKRDFPLAAVTDLGGERAATAVVGPLCTPLDMLARAAPL 379 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPR 404 GDL+ + ++GAYG S T + S E++V+G + IR R Sbjct: 380 PPLAEGDLVAVLQSGAYGLTASPTGFLSHPTPAEVLVDGGEAREIRAR 427 >gi|53714337|ref|YP_100329.1| diaminopimelate decarboxylase [Bacteroides fragilis YCH46] gi|253564815|ref|ZP_04842271.1| diaminopimelate decarboxylase [Bacteroides sp. 3_2_5] gi|265766209|ref|ZP_06094250.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_16] gi|52217202|dbj|BAD49795.1| diaminopimelate decarboxylase [Bacteroides fragilis YCH46] gi|251946280|gb|EES86657.1| diaminopimelate decarboxylase [Bacteroides sp. 3_2_5] gi|263253877|gb|EEZ25342.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_16] gi|301163826|emb|CBW23381.1| putative diaminopimelate decarboxylase [Bacteroides fragilis 638R] Length = 387 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 136/370 (36%), Positives = 197/370 (53%), Gaps = 6/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TPFY Y T + + V YA+KAN+N V+ + G G D V Sbjct: 11 RELPTPFYYYDTKVLRDTLACVNREVARYDNFSVHYAVKANANPKVLTIIRESGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA +IVF+GVGK EIDL L I+CFNVES EL+ +N+ A + G Sbjct: 71 SGGEIRAAIKAGFPAGKIVFAGVGKADWEIDLGLDYDIFCFNVESVPELEVINELAAAKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NP++ A+TH I+TG E+KFGI +H + + A L VK G+ HIG Sbjct: 131 KVANVAFRINPNVGAHTHANITTGLAENKFGISMHDMDKVIDVALELKHVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS---SDYAS 258 SQI + F + +L +L + ++HI+VGGGLGI Y +R P + + Sbjct: 191 SQILDMGDFIALCNRVNELQDKLEARHILVEHINVGGGLGIDYDHPNRQPIPDFADYFRT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + E GR + G L++KV+ +K+ +K F ILD M D +RP LY Sbjct: 251 YDEHLKLRPHQTLHFELGRAITGQCGSLISKVLYVKQGTNKQFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H++ + + D + D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AHHKMENLT--SEDPVVETYDVVGPICESSDVFGKAVDLNKVKRGDLIALRSAGAYGEIM 368 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 369 ASGYNCRELP 378 >gi|327395055|dbj|BAK12477.1| diaminopimelate decarboxylase [Pantoea ananatis AJ13355] Length = 425 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 119/420 (28%), Positives = 193/420 (45%), Gaps = 31/420 (7%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L+ +N L LA PF+ Y I++ AFD +V +A KA SN +++ Sbjct: 21 LNVDN--LLPLARQYSGPFWAYDAQVIQQRIAQLH-AFD----VVRFAQKACSNTHILRL 73 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + G +D VS GE+ RAL A + + T D +D + I V + Sbjct: 74 MHSAGVKVDSVSLGEIERALVAGFQPD---SDEIVFTADVLDNPTLARIAELKVPVNAGS 130 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + ++ + R+NP +K +TG + K GI + + A A G Sbjct: 131 VDMLHQLGAVSPGHAVWLRINPGFGHGHSQKTNTGGENSKHGIWPSDLPAAQA-AIEQYG 189 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +++ G+ MHIGS + + ++ + + G +++ I GGGL I YH Sbjct: 190 LRLIGIHMHIGSGV----DYAHLQQVCDAMVDLVVEFGQDLEAISAGGGLSIPYHYGEEA 245 Query: 251 PSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + Y L K+ +EPGRFLVA+ G+LV++V ++K+ + FV++ Sbjct: 246 IDTDHYFGLWDTARQRVADHLGHAVKLEIEPGRFLVAESGVLVSQVRAVKEMGSRHFVLV 305 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPA---GDRLHIHADIVGPICETGDFIA-------LN 354 D +D MRP++Y +YH I+ + ++ I + + GP+CE+GD Sbjct: 306 DAGFSDLMRPSMYGSYHHISVMAGDNRAIDEQATIDSVVAGPLCESGDVFTQLEGGKVET 365 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R I + GD L TGAYGA S YNSR LIPEI+ + IR ++L+ L+ Sbjct: 366 RAIPAAKVGDYLVFHDTGAYGASMSSNYNSRPLIPEILFENGEPREIRRAQRIEDLLALE 425 >gi|281423178|ref|ZP_06254091.1| diaminopimelate decarboxylase [Prevotella oris F0302] gi|281402514|gb|EFB33345.1| diaminopimelate decarboxylase [Prevotella oris F0302] Length = 386 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 138/370 (37%), Positives = 199/370 (53%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TPFY Y T + + A + +V YA+KAN+N ++K + G G D V Sbjct: 12 QRLSTPFYYYDTELLRRTLTEIKTEANKHSNYIVHYAIKANANTKLLKIIHEAGLGADCV 71 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+ AL A PA IV++GVGK+ EI+L L + I+CFNVES EL+ +N+ A + G Sbjct: 72 SGGEINAALEAGFPAFEIVYAGVGKSDWEINLGLDNEIFCFNVESIPELEVINELAGTKG 131 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + + S+ +A + VK G+ HIG Sbjct: 132 KVANVAFRINPDVGAHTHSSITTGLAENKFGIAMRDMESIINHALHMKHVKFIGLHFHIG 191 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG--GLGIAYHSDHRPPSSSDYAS- 258 SQI + F + + DL QL +G +++HI+VGG G+ + P Y Sbjct: 192 SQILDMSDFVALCRRINDLQNQLDQHGISVRHINVGGGLGIDYEHPDKSSIPDFKAYFDT 251 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 ++ E GR +V G L+T+ + +K+ K F I+D M + +RP LY Sbjct: 252 YAKYLKLRHGQQLHFELGRAVVGQCGSLITRTLYVKQGDTKQFAIVDAGMTELIRPALYQ 311 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A H I N + +R D+VGPICET D A + + GDLL I GAYG + Sbjct: 312 AVH---KIENISSNRPTEIYDVVGPICETSDVFAKDVLLNKTYRGDLLAIRSAGAYGEIM 368 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 369 ASQYNCRKLP 378 >gi|261822862|ref|YP_003260968.1| diaminopimelate decarboxylase [Pectobacterium wasabiae WPP163] gi|261606875|gb|ACX89361.1| diaminopimelate decarboxylase [Pectobacterium wasabiae WPP163] Length = 420 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 109/406 (26%), Positives = 171/406 (42%), Gaps = 27/406 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L +L P + Y I FD + +A KA SN +++ + G Sbjct: 16 NLRELPARFGCPVWAYDAQTIVNRIAQLRQ-FD----TIRFAQKACSNTHILRLMREHGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + T D +D + N+ + + ++ Sbjct: 71 KVDSVSLGEIERALVAGFVPGTD-AHEIVFTADLLDRPTLQRVAELNIPVNAGSVDMLEQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI + + +K+ G+ Sbjct: 130 LGQQSPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALEHIQRY-QLKLVGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH------SDHRP 250 MHIGS + + ++ + +Q+ G +I+ I GGGL I Y Sbjct: 189 HMHIGSGV----DYGHLEQVCEAMVRQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHY 244 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + A + +EPGRFLVA+ G+LV +V +IK + FV++D ND Sbjct: 245 YGLWNAAREKIAAHLGHPVTLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDAGFND 304 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIH---ADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH ++ + D + I GP+CE+GD + Sbjct: 305 LMRPAMYGSYHHVSLLSGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFPLPEA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 + GD L TGAYGA S YNSR L+PE++ + +IR R T Sbjct: 365 QVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410 >gi|42523266|ref|NP_968646.1| hypothetical protein Bd1777 [Bdellovibrio bacteriovorus HD100] gi|39575471|emb|CAE79639.1| lysA [Bdellovibrio bacteriovorus HD100] Length = 391 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 142/396 (35%), Positives = 212/396 (53%), Gaps = 11/396 (2%) Query: 4 FKYFEGSLHAE--NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 +Y L L L P Y Y ++ + Y S A G T + +A+K+ Sbjct: 1 MEYINNELCLGPLKKPLLPLVANYMRPIYVYDLDSVAQRYQAMSQALKG--TRLFFAVKS 58 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N N V++ L LG+G D+VS GE++RAL + IV+SGVGKT E+ AL+ GIY Sbjct: 59 NPNPGVLQKLKSLGAGADVVSLGEIKRALECGFSPQDIVYSGVGKTKFELAEALKLGIYQ 118 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 NVES EL+ + A L KKA +A R+NPD++ NTH I+TG K++KFG+ + +L Sbjct: 119 INVESLPELERIGVLARELNKKAQVALRLNPDVDINTHPYIATGLKDNKFGMERSMVPAL 178 Query: 182 YAYAS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + + GV +H+GSQ+ + + +A K L+ + +L++ ++ D GGGL Sbjct: 179 VKCLKSYSDSIDLVGVSLHLGSQMLEFSGYDEALKRLKTVYLELQAQFPTLKKFDFGGGL 238 Query: 241 GIAYHSDHRPPSS---SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GI Y YA + + +L C++ EPGR+LVA G L+T+V IK+++ Sbjct: 239 GIFYDRVDLQLEESLLQKYAQITLENLSDLNCELQAEPGRWLVAHCGALITQVQYIKETS 298 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 KTFVI+D MN +RP+LY+A H I + D+VGPICE+ DF A + Sbjct: 299 AKTFVIVDAGMNHLIRPSLYEATHRIEPLKR---KDAAFVVDVVGPICESSDFFAKEISL 355 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GD + I +GAYG + YN + L EI + Sbjct: 356 TKVQEGDFVAIMDSGAYGYSMASVYNLQELPLEICI 391 >gi|327470417|gb|EGF15873.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK330] Length = 416 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 161/404 (39%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N A++K L G Sbjct: 11 LAEITAQFPTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS +E A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KEAAGIPKIISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKELGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 AFLASNTVSNDYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVTKV KK+ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKKT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + + D+VG +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--PEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+ YN++L EI++ +IR ++ Sbjct: 364 DTGAHSFSMGYQYNAKLRSSEILLEQDDNVRMIRRAEKPEDYFA 407 >gi|322377602|ref|ZP_08052092.1| protein TabA [Streptococcus sp. M334] gi|321281367|gb|EFX58377.1| protein TabA [Streptococcus sp. M334] Length = 416 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 101/410 (24%), Positives = 161/410 (39%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINKEDLEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + P I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPETISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V KK+ +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTPADLGQVKIFTELGRFMLAPHGALVTRVTHKKKT-YRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHITNVTH--PDGPSEVVDVVGSLCENNDKFAVNRELTHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|13124048|sp|O69203|DCDA_ACTPA RecName: Full=Diaminopimelate decarboxylase; Short=DAP decarboxylase gi|3056878|gb|AAC13998.1| diaminopimelate decarboxylase [Actinosynnema pretiosum subsp. auranticum] Length = 437 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 105/417 (25%), Positives = 181/417 (43%), Gaps = 21/417 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L V +LA TP + F A V +A KA + V Sbjct: 32 GELLLGGVPATELAARFGTPCQVLDEGTVRARARAFREALPE--AEVVFAGKALPCREVY 89 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + +A G LD+ S GEL A + PAER++ G KT +++ AL G+ V+S Sbjct: 90 RWVADEGLSLDVCSAGELAIARSVGFPAERVLLHGNVKTPEDLKAALGYGVGRVVVDSFD 149 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-- 186 E++ L + RV P ++ TH+ ++TG ++ KFG + +L A Sbjct: 150 EIEQLGA---LAEGPQDVLVRVTPGVDPRTHRAVATGVEDQKFGFSLAGGDALEAVLRVV 206 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 P +++ G+ H+GSQ+ + + +A + + L I+ +D+GGG + Y Sbjct: 207 EQPSLRLVGLHCHVGSQVRHVAVYEEAARRVVGLIASCGVR---IEQLDLGGGFAVPYLP 263 Query: 247 DHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSADK 299 +A + + ++ +EPGR +VA G+ + +V ++K+ + Sbjct: 264 GEGEFDLGGFAHRVRVALSHECALRRVPVPRLSIEPGRAVVARAGVTLYRVAAVKRGVRR 323 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV +D M+D RP LY + + + + +VG CE GD +A + + Sbjct: 324 VFVAVDGGMSDNPRPALYGSRYAVRLVRRGGRRA---PVTVVGRHCEAGDVLAEDVPLPE 380 Query: 360 -PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 R GDLL + TGAY + YN+ P + V ++ R T ++L+ + Sbjct: 381 DVRAGDLLAVPVTGAYHHALASNYNAVGRPPVVGVRDGVARVLVRRETEEDLLRREV 437 >gi|329116995|ref|ZP_08245712.1| putative diaminopimelate decarboxylase [Streptococcus parauberis NCFD 2020] gi|326907400|gb|EGE54314.1| putative diaminopimelate decarboxylase [Streptococcus parauberis NCFD 2020] Length = 412 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 85/404 (21%), Positives = 145/404 (35%), Gaps = 18/404 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LEK+ TPF+ Y I + + AF +A+KA A++K L Sbjct: 11 LEKIITTYPTPFHLYDEKGIREKARALNKAFSWNKGFKEYFAVKATPTPAILKILQEENC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D ++ EL + + + + + + Sbjct: 71 GVDCATDVELLMSHELGFTDVMFSSNNTKASEYQYA------RQINATINLDSYDQIGFL 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I +E KFG+ Q+ Sbjct: 125 KAITSLPETISLRYNPGGTFTLGTAIMDHPQESKFGMTKEQLFQGIRDLKADGVQSFGIH 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G + I++ GG+G+ Y + + + Sbjct: 185 SFLASNTVTNDYYPELARDLFNLAVEIKDQLGVKLDFINLSGGIGVNYRPEEKANDIAVI 244 Query: 257 ASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + I E GRF++A G L+T V+ K K +V +D + Sbjct: 245 GEGVRKVYQEVIEPHNLGDLKIFTELGRFMLAPHGHLITTVLHRK-ETYKKYVGVDASAV 303 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I +P D D+VG +CE D A +R++ GD+L I Sbjct: 304 NLLRPAMYGSYHHITNSSHPLAD--FETVDVVGSLCENNDKFAKDRQLPKAEIGDILVIH 361 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI++ +IR T ++ Sbjct: 362 DTGAHGFSMGYQYNGRLRSAEILLKENGDTRLIRRAETPEDYFA 405 >gi|291618675|ref|YP_003521417.1| LysA [Pantoea ananatis LMG 20103] gi|291153705|gb|ADD78289.1| LysA [Pantoea ananatis LMG 20103] Length = 425 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 119/420 (28%), Positives = 193/420 (45%), Gaps = 31/420 (7%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L+ +N L LA PF+ Y I++ AFD +V +A KA SN +++ Sbjct: 21 LNVDN--LLPLARQYSGPFWAYDAQVIQQRIAQLH-AFD----VVRFAQKACSNTHILRL 73 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + G +D VS GE+ RAL A + + T D +D + I V + Sbjct: 74 MHSAGVKVDSVSLGEIERALVAGFQPD---SDEIVFTADVLDNPTLARIAELKVPVNAGS 130 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + ++ + R+NP +K +TG + K GI + + A A G Sbjct: 131 VDMLHQLGAVSPGHAVWLRINPGFGHGHSQKTNTGGENSKHGIWPSDLPAAQA-AIEQYG 189 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +++ G+ MHIGS + + ++ + + G +++ I GGGL I YH Sbjct: 190 LRLIGIHMHIGSGV----DYAHLQQVCDAMVDLVVEFGQDLEAISAGGGLSIPYHYGEEA 245 Query: 251 PSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + Y L K+ +EPGRFLVA+ G+LV++V ++K+ + FV++ Sbjct: 246 IDTDHYFGLWDAARQRVADHLGHAVKLEIEPGRFLVAESGVLVSQVRAVKEMGSRHFVLV 305 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPA---GDRLHIHADIVGPICETGDFIA-------LN 354 D +D MRP++Y +YH I+ + ++ I + + GP+CE+GD Sbjct: 306 DAGFSDLMRPSMYGSYHHISVMAGDNRAIDEQATIDSVVAGPLCESGDVFTQLEGGKVET 365 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R I + GD L TGAYGA S YNSR LIPEI+ + IR ++L+ L+ Sbjct: 366 RAIPAAKVGDYLVFHDTGAYGASMSSNYNSRPLIPEILFENGEPREIRRAQRIEDLLALE 425 >gi|315303911|ref|ZP_07874377.1| diaminopimelate decarboxylase [Listeria ivanovii FSL F6-596] gi|313627721|gb|EFR96388.1| diaminopimelate decarboxylase [Listeria ivanovii FSL F6-596] Length = 386 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 118/377 (31%), Positives = 186/377 (49%), Gaps = 13/377 (3%) Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 G+ V YA KA S A+ + +A G LD+VS GEL A+ A PAERI F G K+ + Sbjct: 8 GVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSGGELYTAIKAGFPAERIHFHGNNKSAE 67 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 EI++AL GI CF +++ E+ L + +KA + RV P I A+TH I TG+ + Sbjct: 68 EINMALDYGIGCFVLDNYYEISLLEDILIERNEKAAVLIRVTPGIEAHTHDYILTGQDDS 127 Query: 170 KFGIPIHQIHS---LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 KFG + + + + G+ HIGSQI + F A + + D + Sbjct: 128 KFGFGLTNGQAEAAIKQVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQ 187 Query: 227 N-GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRF 278 G + Q +++GGG G+ Y ++ P S+Y I + ++ +I +EPGR Sbjct: 188 TLGFDSQVLNLGGGFGVRYTAEDEPLEPSEYVRQIIEEVRDVASTNAIAIPEIWIEPGRS 247 Query: 279 LVADVGILVTKVISIKKSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH 337 LV + G + KV S K+ + +V +D M+D +RP LYDA+++ +P Sbjct: 248 LVGEAGTTLYKVGSRKEVPGIRNYVAVDGGMSDNIRPALYDAHYDAVLAASPE-KVPEET 306 Query: 338 ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ 397 I G CE+GD + + + G++L + TGAYG + YN P + V Sbjct: 307 VAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGI 366 Query: 398 FHIIRPRMTFQELIELD 414 +I R T++ L++ D Sbjct: 367 DKLIVARETYENLVQND 383 >gi|227325996|ref|ZP_03830020.1| diaminopimelate decarboxylase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 420 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 112/406 (27%), Positives = 172/406 (42%), Gaps = 27/406 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL +L P + Y I FD + +A KA SN +++ + G Sbjct: 16 SLRELPARFGCPVWAYDAQTIVNRIAQLRQ-FD----TIRFAQKACSNTHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + T D +D + N+ + + ++ Sbjct: 71 KVDSVSLGEIERALMAGFVPGTD-AHEIVFTADLLDRPTLQRVSELNIPVNAGSVDMLEQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI + A+ +K+ G+ Sbjct: 130 LGQQSPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQRY-QLKLVGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH------SDHRP 250 MHIGS + + ++ + QQ+ G +I+ I GGGL I Y Sbjct: 189 HMHIGSGV----DYGHLEQVCEAMVQQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHY 244 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + A + +EPGRFLVA+ G+LV +V +IK + FV++D ND Sbjct: 245 YGLWNAAREKIAAHLGHPVTLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDAGFND 304 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIH---ADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH ++ + D + I GP+CE+GD + Sbjct: 305 LMRPAMYGSYHHVSLLSGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFALPDA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 + GD L TGAYGA S YNSR L+PE++ + +IR R T Sbjct: 365 QVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410 >gi|288927565|ref|ZP_06421412.1| diaminopimelate decarboxylase [Prevotella sp. oral taxon 317 str. F0108] gi|288330399|gb|EFC68983.1| diaminopimelate decarboxylase [Prevotella sp. oral taxon 317 str. F0108] Length = 387 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 133/370 (35%), Positives = 192/370 (51%), Gaps = 6/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TPFY Y + + + +V YA+KAN+N+ +++T+ G G+D V Sbjct: 10 KHLSTPFYYYDEGMLRATLDALNEQLAQHPNFIVHYAVKANANKRILQTMKAAGLGVDCV 69 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+ AL A + IVF+GVGK EI LAL++GI+CFNVES EL+ + Q L Sbjct: 70 SGGEIEAALRAGFKGDSIVFAGVGKNDWEIKLALENGIFCFNVESIEELEVIEQLCSELN 129 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + A + RVNP++ A+TH KI+TG E+KFGIPI + L ++ G+ HIG Sbjct: 130 RTADVCLRVNPNVAAHTHAKITTGLAENKFGIPIGHVRPTIERLQVLKRIRFIGLHFHIG 189 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG--GLGIAYHSDHRPPSSSDYAS- 258 SQI + F + + L L+ +G +HI+VGG G+ H P DY Sbjct: 190 SQIVDMNDFREVCTSVNSLLNLLKQHGIEPEHINVGGGLGIDYDNPDTHAIPDFKDYFDT 249 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 N + K+ E GR LV G LV++V+ +K+ +K F+ILD MND +RP LY Sbjct: 250 YARHLQLNEKQKVHFELGRALVGQCGWLVSRVLYVKQGQNKRFLILDAGMNDLLRPALYH 309 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A H+I + D+VGP+CE+ D + + G L+ I GAYG Sbjct: 310 ARHQILNLSK--PSAPSEVYDVVGPVCESSDVFGSDVVLPASHRGHLVAICSAGAYGEAM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASQYNCRQLP 377 >gi|242237573|ref|YP_002985754.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech703] gi|242129630|gb|ACS83932.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech703] Length = 442 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 113/413 (27%), Positives = 196/413 (47%), Gaps = 12/413 (2%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 + V++ +A + TPFY YS + + + + + Y+LKAN N +V+ L Sbjct: 16 IDGVAVSDIASRIGTPFYVYSARQLRRQFGQLRQRLP-SNIDIYYSLKANPNLSVVNLLV 74 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G+G ++ S EL ALAA V +R+++ G GK++ ++ A+ + ES +EL Sbjct: 75 TEGAGCEVCSPTELETALAAGVAPQRVLYVGPGKSLAALEHAIDKQVRAIVAESIAELDA 134 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 +N++A + G +A R+NPD N H ++ K +FG+ + H+ A S P + Sbjct: 135 INRQAAASGSVQTVALRINPDFNV-EHARLVMSGKPTQFGLSLENAHAALASLSRWPFIA 193 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPP 251 + G +++G++I ++ + + L + LR ++ +DVGGG G+ Y +P Sbjct: 194 LRGFHIYLGTRILNAQAIADNTRHILQLARALRDRYRLSLDFVDVGGGFGVPYFPKEQPL 253 Query: 252 SSSDYASL-----IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 +II+E GR+LVA+ G+ VT+V ++K + DK F + D Sbjct: 254 DLPQLGDALTRIADDFAAQAPDTRIIIELGRYLVAEAGMFVTRVNTLKTAGDKQFAVCDG 313 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALNRKIALPRPG 363 N ++ N+ + GD R + GP+C D + N + G Sbjct: 314 GANCHSAAAGLNSMLRKNFPLRRLGDNRQRPTQRYQVSGPLCTPTDLLGDNVLLPELTVG 373 Query: 364 DLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 DL+ I +GAYG S + S EIMV+G + +IR T ++L+E Sbjct: 374 DLIGITHSGAYGLTASPGHFLSFGYPAEIMVDGDRVLLIRQPETSRQLLERQR 426 >gi|238916881|ref|YP_002930398.1| diaminopimelate decarboxylase [Eubacterium eligens ATCC 27750] gi|238872241|gb|ACR71951.1| diaminopimelate decarboxylase [Eubacterium eligens ATCC 27750] Length = 426 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 91/404 (22%), Positives = 149/404 (36%), Gaps = 13/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TP++ Y I +N AF +A+KA N ++K L G Sbjct: 13 LKEIDKTYPTPYHLYDEKGIRENAKRLKEAFSWNKGYREYFAVKATPNPYILKILKDYGC 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL A E I+FS +E A + G + Sbjct: 73 GVDCASMAELMMGYALDYKPEEIMFSSNDTPAEEYAYANEIGATINLDDITHIEFLDKIL 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + T I + K+G+ QI + + Sbjct: 133 DGKFPETMSCRYNPGGYFQLGTS--IMDNPGDAKYGMTHDQIIEAFKILKSKGVKHFGIH 190 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G +I+ +++ GG+G+AY + P + Sbjct: 191 SFLASNTVSNEYYPTLAKILFELAVELRDKTGADIKFVNLSGGVGVAYKPEQEPNDIAVI 250 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + I E GRF++A G LVTK I K K ++ +D + Sbjct: 251 GEGVHKVYDEVLGAAGMGDVAIYTELGRFMLAPYGCLVTKAIHEKHI-YKEYIGVDACAS 309 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I H D+ G +CE D A++R + GD L I Sbjct: 310 NLMRPAIYGAYHHITVAGKEDAPCDH-KYDVTGSLCENSDKFAIDRMLPKIDMGDYLIIH 368 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T ++ Sbjct: 369 DTGAHGFSMGYQYNGKLRSAELLLKEDGSVQMIRRAETIKDYYA 412 >gi|282859249|ref|ZP_06268370.1| diaminopimelate decarboxylase [Prevotella bivia JCVIHMP010] gi|282587982|gb|EFB93166.1| diaminopimelate decarboxylase [Prevotella bivia JCVIHMP010] Length = 383 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 129/370 (34%), Positives = 194/370 (52%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y + + T S V YA+KAN+N V+ + G D V Sbjct: 9 KDIETPFYYYDSDILRHTLRTISEEISKHIGFHVHYAIKANANPDVLNIIKEYNLGADCV 68 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+ R++ + PA+++V++GVGK EI+LAL I+CFNVES EL +N+ A Sbjct: 69 SGGEIERSINSGFPAKKVVYAGVGKADWEIELALDYDIFCFNVESLEELAIINEIAEKKE 128 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A + FR+NP++ A+TH I+TG E+KFGI + IH A L ++ G+ HIG Sbjct: 129 KIAKVCFRINPNVVAHTHASITTGLAENKFGIALQDIHKAIKVAKALKNIEFIGLHFHIG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG--GLGIAYHSDHRPPSSSDYAS- 258 SQI ++ F + ++ L G ++ I+VGG G+ S++ P+ Y Sbjct: 189 SQILDMDDFIALCNRINEIQDDLEVKGIKLKIINVGGGLGIDYNNPSENLIPNFKLYFDT 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 ++ E GR + +G L+TKV+ IK S+ K F ILD M D +RP LY Sbjct: 249 YAKYLQLREGQEVHFELGRSVTGQMGSLITKVLYIKHSSTKKFAILDAGMTDLVRPALYQ 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H+I N + + D+VGPICE+ D A + + GD + ++ GAYG + Sbjct: 309 AHHKII---NLSSTEVKETYDVVGPICESSDIFAKDILLPKLHRGDYVALQSAGAYGEIM 365 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 366 ASQYNCRKLP 375 >gi|208779489|ref|ZP_03246834.1| diaminopimelate decarboxylase [Francisella novicida FTG] gi|208744450|gb|EDZ90749.1| diaminopimelate decarboxylase [Francisella novicida FTG] Length = 394 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 139/399 (34%), Positives = 206/399 (51%), Gaps = 11/399 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYA 58 M+ + F+ + E +S L TP Y Y +E +L + D + + YA Sbjct: 1 MNKYIIFDNTKLLEYISKNSLI----TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYA 56 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN N ++ G G+D VS GE++RAL V ++ IVF+GVGK EI+LA+ + Sbjct: 57 IKANHNPKIVDIAKKYGMGIDCVSGGEIKRALEQKVDSQHIVFAGVGKADWEIELAIDND 116 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ FN ES E++ +NQ A K+ I RVNP+I+A TH ISTG+ +DKFGI I Sbjct: 117 IFAFNSESLEEIQVINQIAQRKNKQVNICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDI 176 Query: 179 HSLYAYAS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + I G+ H+GSQI + F + + LR N NI+HI+ G Sbjct: 177 LNWLKDEYRNFANINIIGLHYHVGSQILNYQVFQSLAITTNEHIKLLRQNDINIKHINFG 236 Query: 238 GGLGIAYHSDHRPP---SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GGLGI Y + + P +A + + + E GR LV G+LV++V+ K Sbjct: 237 GGLGIDYQNPQQNPIVDFDGYFARFREFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNK 296 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + FVI+D M + +RP LY A H+I +++ ++ H IVGPICE+ D A Sbjct: 297 VTQGTHFVIIDAGMTELIRPALYQAQHKIAALIDENINQ-KQHYHIVGPICESSDVFAKY 355 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 ++ + GDLL I GAYG V + YN R + E + Sbjct: 356 YQLPKLKRGDLLAIYSAGAYGKVLASEYNLRPSVQEYFI 394 >gi|163852839|ref|YP_001640882.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1] gi|163664444|gb|ABY31811.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1] Length = 431 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 98/408 (24%), Positives = 166/408 (40%), Gaps = 14/408 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L + L +LA TP + Y + + Y A G V +++KAN N AVI Sbjct: 24 GVLRVGGLPLTELAKDFGTPLFVYDADTMRRTYRALCAALAGF-AEVDFSVKANPNPAVI 82 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G+G +I S E A+ A VP E+I+F+G GK ++D + GI ++E+ Sbjct: 83 RVFSQEGAGAEIASGAEFDAAIRAGVPPEKILFAGPGKGAADLDRVIGGGIGEIHLENRE 142 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E+ + A G +A RVNP A GK FG I + Sbjct: 143 EIVRVAAAAERHGVHVRVALRVNPGATAQGGAMRMGGKPS-PFGFDEEDIEAAIDTVEAE 201 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 P +++ G+ + G+Q + ++ + L ++ + GG + Sbjct: 202 PRLRLIGLHLFAGTQGLKADTLLGQWAYGLGLAARIANRIGRPLETIDLGGGLGIPYFSG 261 Query: 249 RPPSS--------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 D + + +++LEPGR+L G+ V +V+++K+S Sbjct: 262 DTALDLGAIRAGLPDLIATLRADPRLASARVVLEPGRYLTGPAGVYVARVLAVKESRGSR 321 Query: 301 FVILDVAMNDFMR---PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 FVI D M+ + + +VGP+C D +A + Sbjct: 322 FVITDGGMHHHLAASGNLGQIVKRDFPLAAVTDAGGERAATAVVGPLCTPLDMLARAAPL 381 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPR 404 GDL+ + ++GAYG S T + S E++V+G + IR R Sbjct: 382 PPLPEGDLVAVLQSGAYGLTASPTGFLSHPTPAEVLVDGGEAREIRAR 429 >gi|225855467|ref|YP_002736979.1| diaminopimelate decarboxylase [Streptococcus pneumoniae JJA] gi|225722559|gb|ACO18412.1| diaminopimelate decarboxylase [Streptococcus pneumoniae JJA] Length = 416 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 158/410 (38%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G + I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHISNVTH--PDGPAEAVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLAIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|261879429|ref|ZP_06005856.1| diaminopimelate decarboxylase [Prevotella bergensis DSM 17361] gi|270333998|gb|EFA44784.1| diaminopimelate decarboxylase [Prevotella bergensis DSM 17361] Length = 393 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 132/367 (35%), Positives = 201/367 (54%), Gaps = 7/367 (1%) Query: 26 QTPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TPFY Y T + + T A D +V YA+KAN+N ++ + G G D VS G Sbjct: 14 PTPFYYYDTDLLRQTTDTVRREAGKYEDFVVHYAVKANANPKILGMICASGLGADCVSGG 73 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E++ L A +IV++GVGK+ EI+LAL++GI+CFNVES EL+ +N+ A + A Sbjct: 74 EIQACLDAGFSPNKIVYAGVGKSDWEINLALEAGIFCFNVESMPELEIINELAAAKNVTA 133 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I R+NPD++A+TH I+TG E+KFGI ++++ + A++L + G+ HIGSQI Sbjct: 134 GICLRINPDVDAHTHANITTGLAENKFGIAMNEMETAVLKATSLSNINFMGLHFHIGSQI 193 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---DYASLIH 261 ++ F K + L L + G ++ ++VGGGLG+ Y + P +A+ H Sbjct: 194 LEMNDFEKLCNRINALQDLLEARGIVVKELNVGGGLGVDYEVPDQHPIPDFETYFATYHH 253 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++ E GR +VA +G L+++ + +K+ K F ILD M + +RP LY A H Sbjct: 254 HLKRRPGQRVHFELGRAIVAQMGTLISRTLYVKQGTHKKFAILDAGMTELIRPALYQALH 313 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 I N + D+VGPICE+ D A + + GDL+ I +GAYG + Sbjct: 314 ---KIENLSSKAPQERYDVVGPICESSDVFAKDYLLNQLHRGDLVAIRSSGAYGESMASQ 370 Query: 382 YNSRLLI 388 YN R L Sbjct: 371 YNCRKLP 377 >gi|218133732|ref|ZP_03462536.1| hypothetical protein BACPEC_01601 [Bacteroides pectinophilus ATCC 43243] gi|217991107|gb|EEC57113.1| hypothetical protein BACPEC_01601 [Bacteroides pectinophilus ATCC 43243] Length = 430 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 95/404 (23%), Positives = 145/404 (35%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 ++++ TPF+ Y I +N AF +A+KA N ++ L Sbjct: 20 IKEITRTYPTPFHLYDEKGIRENASKLKEAFAWNKGYREYFAVKATPNPFILNILKDYDC 79 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A + I+FS +E A + G + Sbjct: 80 GCDCSSLTELMMADRLDFDGKSIMFSSNDTPAEEFAYADKVGAIINLDDITHIDFLEK-- 137 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ QI + + Sbjct: 138 -TIGRIPETISCRYNPGGYFKLGNSIMDNPGDSKYGMTHEQIIEAFKILKSKGAKNFGIH 196 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G +I+ I++ GG+GI Y D P S Sbjct: 197 AFLASNTVTNEYYPALARILFELAVELHEKTGADIKFINLSGGIGIPYTPDKEPNDISVI 256 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + +H+ + I E GRF++A G LVTK I K + + + A N Sbjct: 257 GANVHKVYDEVLTANGMGDVAIYTELGRFMLAPYGCLVTKAIHEKHTYKEYIGVDACAAN 316 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I H DI G +CE D A++R + GD L I Sbjct: 317 LM-RPAMYGAYHHITVAGKENAPCDH-KYDITGSLCENNDKFAIDRMLPKIDMGDYLIIH 374 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL E+++ +IR T ++ Sbjct: 375 DTGAHGFSMGYNYNGRLRSSELLLKEDGSVQMIRRAETPKDYFA 418 >gi|254373451|ref|ZP_04988939.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida GA99-3549] gi|151571177|gb|EDN36831.1| diaminopimelate decarboxylase [Francisella novicida GA99-3549] Length = 394 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 140/399 (35%), Positives = 206/399 (51%), Gaps = 11/399 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYA 58 M+ + F+ + E +S L TP Y Y +E +L + D + + YA Sbjct: 1 MNKYIIFDNTKLLEYISKNSLI----TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYA 56 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN N ++ G G+D VS GE++RAL V ++ IVF+GVGK EI+LA+ + Sbjct: 57 IKANHNPKIVDIAKKYGMGIDCVSGGEIKRALEQKVDSQHIVFAGVGKADWEIELAIDND 116 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ FN ES E++ +NQ A KK I RVNP+I+A TH ISTG+ +DKFGI I Sbjct: 117 IFAFNSESLEEIQVINQIAQRKNKKVNICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDI 176 Query: 179 HSLYAYAS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + I G+ H+GSQI + F + + LR N NI+HI+ G Sbjct: 177 LNWLKDEYRNFANINIIGLHYHVGSQILNYQVFQSLAITTNEHIKLLRQNDINIKHINFG 236 Query: 238 GGLGIAYHSDHRPP---SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GGLGI Y + + P +A + + + E GR LV G+LV++V+ K Sbjct: 237 GGLGIDYQNPQQNPIVDFDGYFARFREFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNK 296 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + FVI+D M + +RP LY A H+I +++ ++ H IVGPICE+ D A Sbjct: 297 VTQGTHFVIIDAGMTELIRPALYQAQHKIAALIDENINQ-KQHYHIVGPICESSDVFAKY 355 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 ++ + GDLL I GAYG V + YN R + E + Sbjct: 356 YQLPKLKRGDLLAIYSAGAYGKVLASEYNLRPSVQEYFI 394 >gi|295398186|ref|ZP_06808232.1| diaminopimelate decarboxylase [Aerococcus viridans ATCC 11563] gi|294973536|gb|EFG49317.1| diaminopimelate decarboxylase [Aerococcus viridans ATCC 11563] Length = 417 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 155/404 (38%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 +E++A + TPF+ Y I AF + +A+KA N V+K + G Sbjct: 13 IEEIAAEIPTPFHLYDEAGIRDRCRRLKKAFSWNPNFHEYFAVKATPNPHVLKIMQEEGM 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL A I+FS + A + G + + Sbjct: 73 GVDCASYTELVLADKVGFSGHDIMFSSNVTPAADFKKAAELGAIINFDDITHIDFF---K 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + R NP I + K+G+ Q + + I Sbjct: 130 EHVGEFPETVCIRYNPGGTFEVANGIMDNPGDAKYGMTPEQTRQAFQKLADYGVKNIGIH 189 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + A L + NI I++ GG+G+AY + P Sbjct: 190 SFLVSGSTSNEYYPKLARTLFELAVELKDQTDLNITFINLSGGVGVAYKPEETPADIDII 249 Query: 257 ASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + ++ I E GR+++A+ G LV KV+ K + K ++ LD + + Sbjct: 250 GDGVRQAYEDIMEPAGLGDVAIFTELGRWMLAENGGLVAKVLHEKIT-YKDYIGLDASAS 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 D +RP +Y AYH I+ + + D+ G +CE D A++R++ GD ++I Sbjct: 309 DLLRPAMYGAYHHISVLGK-EDETADQTYDVTGGLCENNDKFAIDRQLPKTNIGDYIWIH 367 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+GA YN++L E+M+ F IR T ++ Sbjct: 368 DAGAHGASMGYQYNAKLRSAEVMLKEDGTFKQIRRPETPEDYFA 411 >gi|118498099|ref|YP_899149.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida U112] gi|194323325|ref|ZP_03057109.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida FTE] gi|118424005|gb|ABK90395.1| diaminopimelate decarboxylase [Francisella novicida U112] gi|194322689|gb|EDX20169.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida FTE] Length = 394 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 140/399 (35%), Positives = 207/399 (51%), Gaps = 11/399 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYA 58 M+ + F+ + E +S L TP Y Y +E +L + D + + YA Sbjct: 1 MNKYIIFDNTKLLECISKNSLI----TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYA 56 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN N ++ G G+D VS GE++RAL V ++ IVF+GVGK EI+LA+ + Sbjct: 57 IKANHNPKIVDIAKKYGMGIDCVSGGEIKRALEQKVDSQHIVFAGVGKADWEIELAIDND 116 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ FN ES E++ +NQ A K+ I RVNP+I+A TH ISTG+ +DKFGI I Sbjct: 117 IFAFNSESLEEIQVINQIAQRKNKQVNICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDI 176 Query: 179 HSLYAYAS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + +KI G+ H+GSQI + F + + LR N NI+HI+ G Sbjct: 177 LNWLKDEYRNFANIKIIGLHYHVGSQILNYQVFQSLAITTNEHIRLLRQNDINIKHINFG 236 Query: 238 GGLGIAYHSDHRPP---SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GGLGI Y + + P +A + + + E GR LV G+LV++V+ K Sbjct: 237 GGLGIDYQNPQQNPIVDFDGYFARFREFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNK 296 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + FVI+D M + +RP LY A H+I +++ ++ H IVGPICE+ D A Sbjct: 297 VTQGTHFVIIDAGMTELIRPALYQAQHKIAALIDENINQ-KQHYHIVGPICESSDVFAKY 355 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 ++ + GDLL I GAYG V + YN R + E + Sbjct: 356 YQLPKLKRGDLLAIYSAGAYGKVLASEYNLRPSVQEYFI 394 >gi|325661240|ref|ZP_08149867.1| hypothetical protein HMPREF0490_00600 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472747|gb|EGC75958.1| hypothetical protein HMPREF0490_00600 [Lachnospiraceae bacterium 4_1_37FAA] Length = 423 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 150/404 (37%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++A + TPF+ Y I +N AF +A+KA N +I+ L G Sbjct: 12 LEEIAKIYPTPFHIYDERGIRENVRALKEAFSWNKGYKEYFAVKATPNPFLIQILREYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A E I+FS +E A + G + Sbjct: 72 GCDCSSYTELMMSEAIGAVGEDIMFSSNATPAEEFVYADKLGGIINLDDFTHIDFLEKAI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ Q+ + Sbjct: 132 GHIPE---TISCRYNPGGLFQISNDIMDNPGDAKYGMTTEQLFDAFRILKEKGAKHFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + + G +I+ I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNEYYPMLAKVLFEVAVKLQKETGVHIKFINLSGGIGIPYRPDQEPNDIHAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++ G LVT+ I K + K ++ D Sbjct: 249 GEGVRKVYEEVLVPAGMGDVAIYTELGRFMMGPYGALVTRAIHEKHT-HKEYIGCDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H D+ G +CE D A++R + GDLLYI Sbjct: 308 NLMRPAMYGAYHHITVMGKEDAPCDH-KYDVTGSLCENNDKFAIDRMLPKIDTGDLLYIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T + Sbjct: 367 DTGAHGFAMGYNYNGKLKSAELLLKEDGSVQMIRRAETPADYYA 410 >gi|289167176|ref|YP_003445443.1| diaminopimelate decarboxylase [Streptococcus mitis B6] gi|288906741|emb|CBJ21575.1| diaminopimelate decarboxylase [Streptococcus mitis B6] Length = 416 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 100/410 (24%), Positives = 160/410 (39%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LEK+ TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEKIIAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LKEEGCGVDCSSYVELLMSHKLNFSGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y + P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPEQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V KK+ +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKT-YRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHITNVTH--PDGPAEVVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR + Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPDDYFA 407 >gi|299140571|ref|ZP_07033709.1| diaminopimelate decarboxylase [Prevotella oris C735] gi|298577537|gb|EFI49405.1| diaminopimelate decarboxylase [Prevotella oris C735] Length = 386 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 139/370 (37%), Positives = 199/370 (53%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TPFY Y T + + A + +V YA+KAN+N ++K + G G D V Sbjct: 12 QRLSTPFYYYDTELLRRTLTEIKTEANKHSNYIVHYAIKANANTKLLKIIHEAGLGADCV 71 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE++ AL A PA IV++GVGK+ EI+L L + I+CFNVES EL+ +N+ A + G Sbjct: 72 SGGEIKAALEAGFPASEIVYAGVGKSDWEINLGLDNEIFCFNVESIPELEVINELAGTKG 131 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + I S+ A + VK G+ HIG Sbjct: 132 KVANVAFRINPDVGAHTHSNITTGLAENKFGIAMRDIDSIINRALHMKHVKFIGLHFHIG 191 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG--GLGIAYHSDHRPPSSSDYAS- 258 SQI + F + + DL QL +G +++HI+VGG G+ + P Y Sbjct: 192 SQILDMSDFVALCRRINDLQNQLEKHGISVRHINVGGGLGIDYEHPDKSAIPDFKAYFDT 251 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 ++ E GR +V G L+T+ + +K+ K F I+D M + +RP LY Sbjct: 252 YAKYLKLRHGQQLHFELGRAVVGQCGSLITRTLYVKQGDTKQFAIVDAGMTELIRPALYQ 311 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A H I N + +R D+VGPICET D A + + GDLL I GAYG + Sbjct: 312 AVH---KIENISSNRSTEIYDVVGPICETSDVFAKDVLLNKTYRGDLLAIRSAGAYGEIM 368 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 369 ASQYNCRKLP 378 >gi|291557977|emb|CBL35094.1| Diaminopimelate decarboxylase [Eubacterium siraeum V10Sc8a] Length = 423 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 93/406 (22%), Positives = 148/406 (36%), Gaps = 17/406 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++ + TPF+ Y I + +AF +A+KA N +++ L G Sbjct: 12 LEEIIKQIPTPFHIYDEKGIRETARKLYDAFSWNKGFREYFAVKATPNPYLMEILKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+FS ++ LA + G + Sbjct: 72 GFDCSSYTELMLSDKVGAKQHDIMFSSNATPDEDFKLAYKLGAIINLDDFTHIDVL---- 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHK--KISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 G I R NP T + + K+ K+G+ QI Y + Sbjct: 128 DKLTGIPETICCRYNPGGEFKTSEKGNVMDTPKDAKYGMTHEQIIEAYKILKEKGAKRFG 187 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + A L R + G + I++ GG+G+ Y D Sbjct: 188 MHAFLASNTLTNEYYPVLAGILFRTAVEIKEKTGVQLSFINLSGGVGVPYKPDQPANDIK 247 Query: 255 DYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + + + I E GR+++A G LV K I K + + A Sbjct: 248 VIGEGVRKAYEEILVPAGMGDVAIFTELGRYMLAPNGALVAKAIREKHIYKEYIGLDACA 307 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 N RP +Y AYH I + H DI G +CE D A++R + GD++Y Sbjct: 308 ANLM-RPAIYGAYHHITVMGKENQPCDH-KYDITGGLCENCDKFAVDRMLPKIDIGDIIY 365 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 I TGA+G YN +L E+++ F +IR T ++ Sbjct: 366 IHDTGAHGFSMGYNYNGKLRSAEVLLKEDGSFKLIRRAETPEDYFA 411 >gi|15903834|ref|NP_359384.1| diaminopimelate decarboxylase [Streptococcus pneumoniae R6] gi|116516303|ref|YP_817197.1| diaminopimelate decarboxylase [Streptococcus pneumoniae D39] gi|15459476|gb|AAL00595.1| Diaminopimelate decarboxylase [Streptococcus pneumoniae R6] gi|116076879|gb|ABJ54599.1| diaminopimelate decarboxylase [Streptococcus pneumoniae D39] Length = 416 Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 157/410 (38%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERVAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G + I++ GG+G+ Y D P Sbjct: 181 KTFGLHSFLASNTVTHLYYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHISNVTH--PDGPAEAVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|227112405|ref|ZP_03826061.1| diaminopimelate decarboxylase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 420 Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 111/406 (27%), Positives = 169/406 (41%), Gaps = 27/406 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL +L P + Y I FD + +A KA SN +++ + G Sbjct: 16 SLRELPARFGCPVWAYDAQTIVNRIAQLRQ-FD----TIRFAQKACSNTHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + T D +D + N+ + + ++ Sbjct: 71 KVDSVSLGEIERALIAGFVPGTD-AHEIVFTADLLDRPTLQRVSELNIPVNAGSVDMLEQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI + A+ +K+ G+ Sbjct: 130 LGQQSPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQRY-QLKLVGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH------SDHRP 250 MHIGS + + ++ + QQ+ G +I+ I GGGL I Y Sbjct: 189 HMHIGSGV----DYGHLEQVCEAMVQQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHY 244 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + A + +EPGRFLVA+ G+LV +V +IK + FV++D ND Sbjct: 245 YGLWNAAREKIAAHLGHPVTLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH + + I GP+CE+GD + Sbjct: 305 LMRPAMYGSYHHVSLLPGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFALPDA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 + GD L TGAYGA S YNSR L+PE++ + +IR R T Sbjct: 365 QVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410 >gi|149003637|ref|ZP_01828502.1| OxaA-like protein precursor [Streptococcus pneumoniae SP14-BS69] gi|168492047|ref|ZP_02716190.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC0288-04] gi|168494781|ref|ZP_02718924.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC3059-06] gi|221232702|ref|YP_002511856.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae ATCC 700669] gi|237650995|ref|ZP_04525247.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae CCRI 1974] gi|237822553|ref|ZP_04598398.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae CCRI 1974M2] gi|307128176|ref|YP_003880207.1| diaminopimelate decarboxylase [Streptococcus pneumoniae 670-6B] gi|147758369|gb|EDK65369.1| OxaA-like protein precursor [Streptococcus pneumoniae SP14-BS69] gi|183573698|gb|EDT94226.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC0288-04] gi|183575334|gb|EDT95862.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC3059-06] gi|220675164|emb|CAR69748.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae ATCC 700669] gi|306485238|gb|ADM92107.1| diaminopimelate decarboxylase [Streptococcus pneumoniae 670-6B] Length = 416 Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 157/410 (38%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERVAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G + I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHISNVTH--PDGPAEAVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|148989978|ref|ZP_01821253.1| OxaA-like protein precursor [Streptococcus pneumoniae SP6-BS73] gi|149007453|ref|ZP_01831096.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74] gi|149021928|ref|ZP_01835915.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72] gi|147761025|gb|EDK67994.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74] gi|147924638|gb|EDK75724.1| OxaA-like protein precursor [Streptococcus pneumoniae SP6-BS73] gi|147929966|gb|EDK80954.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72] gi|332071955|gb|EGI82443.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA17545] Length = 416 Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 158/410 (38%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G + I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHISNVTH--PDGPAEAVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|253689848|ref|YP_003019038.1| diaminopimelate decarboxylase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756426|gb|ACT14502.1| diaminopimelate decarboxylase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 420 Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 109/406 (26%), Positives = 169/406 (41%), Gaps = 27/406 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL +L P + Y I FD + +A KA SN +++ + G Sbjct: 16 SLRELPARFGCPVWAYDAQTIVNRIAQLRQ-FD----TIRFAQKACSNTHILRLMREQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + T D +D + N+ + + ++ Sbjct: 71 KVDSVSLGEIERALIAGFVPGTD-AHEIVFTADLLDRPTLQRVSELNIPVNAGSVDMLEQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI + A+ +K+ G+ Sbjct: 130 LGQQSPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQRY-QLKLVGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH------SDHRP 250 MHIGS + + ++ + +Q+ G +I+ I GGGL I Y Sbjct: 189 HMHIGSGV----DYGHLEQVCEAMVRQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHY 244 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + A + +EPGRFLVA+ G+LV +V ++K + FV++D ND Sbjct: 245 YGLWNAAREKIAAHLGHPVTLEIEPGRFLVAESGVLVAEVRAVKSMGSRHFVLVDAGFND 304 Query: 311 FMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH + + I GP+CE+GD + Sbjct: 305 LMRPAMYGSYHHVSLLPGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFALPDA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 + GD L TGAYGA S YNSR L+PE++ + +IR R T Sbjct: 365 QVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410 >gi|303254099|ref|ZP_07340214.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS455] gi|303260351|ref|ZP_07346321.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP-BS293] gi|303262499|ref|ZP_07348441.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP14-BS292] gi|303265130|ref|ZP_07351043.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS397] gi|303266008|ref|ZP_07351903.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS457] gi|303268060|ref|ZP_07353861.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS458] gi|302598932|gb|EFL65963.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS455] gi|302636399|gb|EFL66892.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP14-BS292] gi|302638517|gb|EFL68982.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP-BS293] gi|302642420|gb|EFL72766.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS458] gi|302644449|gb|EFL74701.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS457] gi|302645347|gb|EFL75581.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS397] Length = 416 Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 100/410 (24%), Positives = 160/410 (39%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ YH D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYHPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHISNVTH--PDGPAEVVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|15901801|ref|NP_346405.1| diaminopimelate decarboxylase [Streptococcus pneumoniae TIGR4] gi|111658864|ref|ZP_01409485.1| hypothetical protein SpneT_02000035 [Streptococcus pneumoniae TIGR4] gi|14973485|gb|AAK76045.1| diaminopimelate decarboxylase [Streptococcus pneumoniae TIGR4] gi|301802655|emb|CBW35421.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae INV200] gi|332199292|gb|EGJ13370.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA41317] Length = 416 Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 100/410 (24%), Positives = 159/410 (38%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERVAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ YH D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYHPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHISNVTH--PDGPAEVVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|225859733|ref|YP_002741243.1| diaminopimelate decarboxylase [Streptococcus pneumoniae 70585] gi|225721732|gb|ACO17586.1| diaminopimelate decarboxylase [Streptococcus pneumoniae 70585] Length = 416 Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 158/410 (38%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS + E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFLGSEIMFSSNNTSDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERVAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G + I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHISNVTH--PDGPAEAVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|328886304|emb|CCA59543.1| Diaminopimelate decarboxylase [Streptomyces venezuelae ATCC 10712] Length = 432 Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 109/417 (26%), Positives = 188/417 (45%), Gaps = 13/417 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 + + + +LA TPFY Y A+E AFD ++LK+N N AV L Sbjct: 6 EVQGIPVAELAETYGTPFYLYDGDALEGRMRALREAFD-PRLEFFFSLKSNPNIAVCALL 64 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G+ ++ S EL A A V E I+F G GK+ DEI L GI ES EL Sbjct: 65 HAHGARAEVCSMTELLTARQAGVAPEDIIFLGPGKSRDEIAACLDEGISALVCESTQELA 124 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 +++ A G +AP+A RVNP + K +FGI Q+ + A+ P V Sbjct: 125 LIDELARERGVRAPVALRVNPAFSVKGSGLTMG-GKPRQFGIDEAQLLADPDLAARHPHV 183 Query: 192 KISGVDMHIGSQI-DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ GV +++G++I + + ++ + + G ++ +D+GGGLG+AY Sbjct: 184 RLMGVQVYMGTRILSEQSVVENSTRIFDLAERLSAALGFPLELVDIGGGLGVAYFDGEND 243 Query: 251 PSSSDYASLIH-----QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 S A+ ++ + ++++E GR+L A+ G V +V +K S + F + D Sbjct: 244 LDLSVLATDLNPVLAGFADRHPSTRLVMELGRYLTAEAGTYVLRVRYVKTSLGENFAVTD 303 Query: 306 VAMNDFMR----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 + M + + + + ++ GP+C D +A ++ Sbjct: 304 GGTHHHMAAVGIGSFVKRNFPMRLLSGAGEETGTETWNVTGPLCTPNDTLAKKIQLPPLA 363 Query: 362 PGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 PGDLL ++++GAYG S + S E++V + H++R +L+ +P Sbjct: 364 PGDLLGVDRSGAYGPTASPVNFLSHGYPAEVLVVDGRAHLVREPDRPADLLSKQRLP 420 >gi|311894653|dbj|BAJ27061.1| putative diaminopimelate decarboxylase [Kitasatospora setae KM-6054] Length = 465 Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 113/430 (26%), Positives = 184/430 (42%), Gaps = 25/430 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G L VSL + A TP Y + + A V YA KA A+ Sbjct: 37 GGDLLVGGVSLREAAERFGTPLYVFDEGEARARARAYRRALPE--AEVLYAAKAFLCTAM 94 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 +A G GLD+ S GELR A AA PA RI+ G K+ DE+ LA + G+ +++ Sbjct: 95 ADLVAEEGLGLDVCSAGELRLAAAAGFPAGRILLHGNAKSPDELRLARRLGVGRIVLDNL 154 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 +E+ L A + + RV P + A H + TG KFG I + A T Sbjct: 155 AEIPRLAALATP-DRPQRVLVRVLPGVAAGHHAAVRTGVDGQKFGFSIASGEAAEAVRRT 213 Query: 188 L--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAY 244 L P +++ G+ H+GSQI + A L +L ++R + +D+GGG G+ Y Sbjct: 214 LAQPALRLVGLHCHLGSQITDPAPYRTAVDRLVELLARIRDEHAVELPELDLGGGHGVRY 273 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKS- 296 + + +A+ K+++EPGR + A + + +V+++K + Sbjct: 274 LPGDPELTPAAFAAATTARLAARCAEHALAVPKLLIEPGRAVAAPAAVALYRVLAVKHTA 333 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVN----------PAGDRLHIHADIVGPICE 346 + F +D M+D RP LY + + + + +G D+VG CE Sbjct: 334 EGRAFAAVDGGMSDNPRPALYGSAYTVRVLGRAPRLGGGGVVGSGAGPTRPFDVVGCHCE 393 Query: 347 TGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 GD +A + + RPGDLL + GAY + YN + + ++ R Sbjct: 394 AGDVLARDAPLPADLRPGDLLAVPAAGAYQLAMASGYNLVGRPALVAARDGRARLLVRRE 453 Query: 406 TFQELIELDS 415 T + + ++ Sbjct: 454 TVDDFLARET 463 >gi|148993161|ref|ZP_01822727.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP9-BS68] gi|168489983|ref|ZP_02714182.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP195] gi|147928135|gb|EDK79153.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP9-BS68] gi|183571632|gb|EDT92160.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP195] gi|332072059|gb|EGI82546.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA17570] Length = 416 Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 157/410 (38%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERVAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G + I++ GG+G+ Y D P Sbjct: 181 KTFGLHSFLASNTVTHLYYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHISNVTH--PDGPAEAVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|307709729|ref|ZP_07646180.1| protein tabA [Streptococcus mitis SK564] gi|307619431|gb|EFN98556.1| protein tabA [Streptococcus mitis SK564] Length = 416 Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 100/410 (24%), Positives = 159/410 (38%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINKEDLEAIVAEFLTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + P I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 NTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHITNVTH--PDGPAEVVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLIIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|304396707|ref|ZP_07378587.1| diaminopimelate decarboxylase [Pantoea sp. aB] gi|304355503|gb|EFM19870.1| diaminopimelate decarboxylase [Pantoea sp. aB] Length = 418 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 110/412 (26%), Positives = 171/412 (41%), Gaps = 29/412 (7%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA PF+ Y I+ AFD +V +A KA SN +++ + G +D Sbjct: 20 LARRYSGPFWAYDAQIIQARIAQLQ-AFD----VVRFAQKACSNTHILRLMRAAGVKVDS 74 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RALAA T D D + V + + + ++ Sbjct: 75 VSLGEIERALAAGYQPGGDEI---VFTADLFDQPTLERVTALKVPVNAGSIDMLHQLGAV 131 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + RVNP +K +TG + K GI + A + I Sbjct: 132 SPGHAVWLRVNPGFGHGHSQKTNTGGENSKHGIWHGDLAEALATIKQYGLQLV-----GI 186 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 I + ++ + + + ++G ++ I GGGL I Y + Y L Sbjct: 187 HMHIGSGVDYAHLQQVCDAMVELVMASGQDLSAISAGGGLSIPYRYGEEAIDTHHYFGLW 246 Query: 261 HQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + +EPGRFLVA+ G+LV++V ++K + FV++D +D MRP Sbjct: 247 DAARQRIAQHLGHAVKLEIEPGRFLVAEAGVLVSQVRAVKSMGSRHFVLVDAGFSDLMRP 306 Query: 315 TLYDAYHE---INYIVNPAGDRLHIHADIVGPICETGDFIA-------LNRKIALPRPGD 364 ++Y +YH + ++ I + GP+CE+GD R I + GD Sbjct: 307 SMYGSYHHISLMAGDERAIDEQQTIDTVVAGPLCESGDVFTQLEGGMVEPRAIPAAKVGD 366 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 L TGAYGA S YNSR LIPE++ Q IR T + L+ L+ I Sbjct: 367 YLVFHDTGAYGASMSSNYNSRPLIPEVLFEQGQPREIRRAQTIESLLALEII 418 >gi|260590851|ref|ZP_05856309.1| diaminopimelate decarboxylase [Prevotella veroralis F0319] gi|260537202|gb|EEX19819.1| diaminopimelate decarboxylase [Prevotella veroralis F0319] Length = 385 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 131/370 (35%), Positives = 199/370 (53%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TPFY Y + + +V YA+KAN+N+ V+ ++ G G D V Sbjct: 11 RTIDTPFYYYDCDLLRETLHVIEEEASKHKGYIVHYAVKANANKKVLNLISQTGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE++R L P+E+IV++GVGK EI+L L + I+CFNVESE EL+ +N+ A G Sbjct: 71 SGGEIQRCLECGFPSEKIVYAGVGKADWEINLGLDNDIFCFNVESEEELEIINKLAQKRG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A + R+NP++ A+TH I+TG E+KFGI + + S+ + A + + + G+ HIG Sbjct: 131 KIASVCLRINPEVGAHTHANITTGLAENKFGIALRYVPSIISAALEITHINLIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP---SSSDYAS 258 SQI +++ F + D+ L G +++I+VGGGLGI Y+ P S + + Sbjct: 191 SQIMEMQDFQALCARINDIQDDLEKRGVKVENINVGGGLGIDYNDPEGHPIPDFQSYFNT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + K+ E GR +V +G L+T+ + +K+ + F I+D M+D +RP LY Sbjct: 251 FAKHLKLRKEQKVHFELGRSVVGQMGSLITRTLYVKQGKSRQFAIVDAGMSDLLRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H I N + D+VGPICE+ D A + GDLL I GAYG Sbjct: 311 AHHRIV---NLSNTDDLQSYDVVGPICESSDVFAKEVSLPTVHRGDLLAIRSAGAYGESM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASQYNCRKLP 377 >gi|315223132|ref|ZP_07865000.1| putative diaminopimelate decarboxylase [Streptococcus anginosus F0211] gi|315187821|gb|EFU21568.1| putative diaminopimelate decarboxylase [Streptococcus anginosus F0211] Length = 420 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 93/404 (23%), Positives = 161/404 (39%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I + AF +A+KA N ++K L G Sbjct: 15 LAEITTQFPTPFHLYDEKGIRETARALQKAFSWNQGFKEYFAVKATPNPTILKILKEEGC 74 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + ++FS +EI A + G + + Sbjct: 75 GVDCASYVELLMSQKVGFSGNDMMFSSNDTPAEEIQFARELGATINLDA----YEDVAFL 130 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I +E KFG+ Q+ + L K Sbjct: 131 QEVASIPEIISCRYNPGGVFELGTDIMDSPEEAKFGMTKEQLIQAFKDLKKLGVKKFGIH 190 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + ++ I++ GG+G+ Y + + Sbjct: 191 ALLASNTVTNHYYPELARQLFELAVEIVAETNVDLDFINLSGGVGVPYRPEEKANDILAI 250 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + + KI E GRF++A G+LVTKV+ KK+ +T++ +D + Sbjct: 251 GQGVRRVYEEILTPAGLGKVKIFTELGRFMLAPHGLLVTKVLHKKKT-YRTYIGVDASAV 309 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y AYH I + D D+VG +CE D A+ R++ + GD L I Sbjct: 310 NLLRPAMYGAYHHITNM--DHPDGPTEIVDVVGSLCENNDKFAIQRELPITNIGDTLVIH 367 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 368 DTGAHGFSMGYQYNAKLRSAEILLEEDGGVRMIRRAEIPEDYFA 411 >gi|319938690|ref|ZP_08013054.1| diaminopimelate decarboxylase [Streptococcus anginosus 1_2_62CV] gi|319811740|gb|EFW08006.1| diaminopimelate decarboxylase [Streptococcus anginosus 1_2_62CV] Length = 416 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 91/404 (22%), Positives = 158/404 (39%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y I AF +A+KA N ++K L G Sbjct: 11 LAEITAQFPTPFHLYDEKGIRATARALQKAFSWNQGFKEYFAVKATPNPTILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + ++ S E+ A + G + + Sbjct: 71 GVDCASYVELLMSQKVGFSGNDMMLSSNDTPAKEMQFARELGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 QEVASIPEIISCRYNPGGVFELGTDIMDSPEEAKFGMTKEQLIQAFKDLKNLGVKKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + ++ I++ GG+G+ Y + + Sbjct: 187 ALLASNTVTNHYYPELARQLFELAVEVVAETNVDLDFINLSGGVGVPYRPEEKANDILAI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + + KI E GRF++A G+LVTKV+ KK+ +T++ +D + Sbjct: 247 GQGVRRVYEEILTPAGLGKVKIFTELGRFMLAPHGLLVTKVLHKKKT-YRTYIGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y AYH I + D D+VG +CE D A+ R++ + GD L I Sbjct: 306 NLLRPAMYGAYHHITNM--DYPDGPTEIVDVVGSLCENNDKFAIQRELPITNIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSAEILLEEDGGVRMIRRAEIPEDYFA 407 >gi|300718186|ref|YP_003742989.1| Diaminopimelate decarboxylase [Erwinia billingiae Eb661] gi|299064022|emb|CAX61142.1| Diaminopimelate decarboxylase [Erwinia billingiae Eb661] Length = 417 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 118/410 (28%), Positives = 184/410 (44%), Gaps = 29/410 (7%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L P + Y + I + FD +V +A KA SN +++ + G +D Sbjct: 20 LVRQYGGPVWAYDASVIAERISQLQQ-FD----VVRFAQKACSNIHILRLMRAAGVKVDS 74 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RAL A T D +D + + + + + + + Sbjct: 75 VSLGEIERALVAGFTPGGDEI---VFTADVLDEPTLARLAELKIPVNAGSVDMLHQLGEV 131 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + P+ RVNP +K +TG + K GI + A +K+ G+ MHI Sbjct: 132 SEGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLVLALE-AIKQHRLKLVGIHMHI 190 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 GS + + ++ + Q+ GH+++ I GGGL I Y ++ Y L Sbjct: 191 GSGV----DYAHLEQVCDAMVNQVIGLGHDLEAISAGGGLSIPYRFGEEAINTEHYFGLW 246 Query: 261 HQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 K+ +EPGRFLVA+ G+LV+KV ++K + FV++D ND MRP Sbjct: 247 DAARQRVAKHLGHPVKLEIEPGRFLVAESGVLVSKVRAVKAMGSRHFVLVDAGFNDLMRP 306 Query: 315 TLYDAYHEINYIV---NPAGDRLHIHADIVGPICETGDFIA-------LNRKIALPRPGD 364 +Y +YH I+ I P ++ + + + GP+CE+GD R + +PGD Sbjct: 307 AMYGSYHHISAIAGDDRPLDEQNTVDSVVAGPLCESGDVFTQLEGGKVETRALPQVKPGD 366 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 L TGAYGA S YNSR L+PE++ Q IR T QEL+ L+ Sbjct: 367 YLVFHDTGAYGASMSSNYNSRPLLPEVLFEAGQPREIRRPQTIQELLALE 416 >gi|225861795|ref|YP_002743304.1| diaminopimelate decarboxylase [Streptococcus pneumoniae Taiwan19F-14] gi|298230174|ref|ZP_06963855.1| diaminopimelate decarboxylase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254780|ref|ZP_06978366.1| diaminopimelate decarboxylase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503748|ref|YP_003725688.1| diaminopimelate decarboxylase [Streptococcus pneumoniae TCH8431/19A] gi|225728238|gb|ACO24089.1| diaminopimelate decarboxylase [Streptococcus pneumoniae Taiwan19F-14] gi|298239343|gb|ADI70474.1| possible diaminopimelate decarboxylase [Streptococcus pneumoniae TCH8431/19A] gi|327389142|gb|EGE87488.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA04375] Length = 416 Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 159/410 (38%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + G I+ R NP I +E KFG+ Q+ +A Sbjct: 121 EDIEHLERVAGIPEIISCRYNPGGVFELGTDIMDNPEEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGLHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHISNVTH--PDGPAEAVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|149190404|ref|ZP_01868676.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] gi|148835783|gb|EDL52748.1| diaminopimelate decarboxylase [Vibrio shilonii AK1] Length = 508 Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 76/449 (16%), Positives = 142/449 (31%), Gaps = 33/449 (7%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYA 58 L L +P + S + N NAF V +A Sbjct: 46 DELTTQGDDLLIGGCKATDLIEQYGSPLFVLSEDTLRGNLRRVKNAFGNYWPKPVNVMFA 105 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +K+N+N AV G G D GE+ A + I +G K I A++ G Sbjct: 106 IKSNTNFAVRAICNEEGVGGDCFGPGEVEATHIAGADPKTIALNGTVKPELAIRKAIEYG 165 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI-----------NANTHKKISTGKK 167 ++S E++ + + A + + V + +A K Sbjct: 166 YAIH-LDSYEEIEIVERIAREVKPAEKVRIAVRLKVIPEDFFNDFEPDAYPFPNFIGAMK 224 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 KFG+ + + + + G H+G Q E + ++ ++ Sbjct: 225 WIKFGLLKEEAKKIINRVKEIDIFEFYGFHTHLGRFSKQPEGWDALYREYARNVIEISRE 284 Query: 228 GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC---------------KII 272 GG S + + + C ++ Sbjct: 285 CGVQPFQVDLGGGWPREREPECRSKEHMMNSNTIEDYAKIVCEGMLEEFTKEGFEVPQLW 344 Query: 273 LEPGRFLVADVGILVTKVIS--IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 LEPGR++ ++G L+T V + D T+ ++D + ++ + + Sbjct: 345 LEPGRYIAGNIGTLLTSVYVVKDDQEMDYTYTMVDASTYLATLVESQESKNPVLPANKMT 404 Query: 331 GDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE 390 + +I GPIC + P D+L I G Y Q+ +NS Sbjct: 405 QPLVKKTTEIAGPICIPS-IWESAATMPALEPKDVLAIMDVGHYAESQASQFNSLPRPAT 463 Query: 391 IMVNGSQFHIIRPRMTFQELIELDSIPAW 419 ++V Q +I+ T +++ +P Sbjct: 464 VLVKDGQAELIKRAETVEDVFATQILPER 492 >gi|332678824|gb|AEE87953.1| Diaminopimelate decarboxylase [Francisella cf. novicida Fx1] Length = 394 Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 139/399 (34%), Positives = 206/399 (51%), Gaps = 11/399 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYA 58 M+ + F+ + E +S L TP Y Y +E +L + D + + YA Sbjct: 1 MNKYIIFDNTKLLECISKNSLI----TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYA 56 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN N ++ G G+D VS GE++RAL V ++ IVF+GVGK EI+LA+ + Sbjct: 57 IKANHNPKIVDIAKKYGMGIDCVSGGEIKRALEQKVDSQHIVFAGVGKADWEIELAIDND 116 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ FN ES E++ +NQ A KK I RVNP+I+A TH ISTG+ +DKFGI I Sbjct: 117 IFAFNSESLEEIQVINQIAQRKNKKVNICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDI 176 Query: 179 HSLYAY-ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + I G+ H+GSQI + F + + L+ N NI+HI+ G Sbjct: 177 LNWLKDEYHNFANINIIGLHYHVGSQILNYQVFQSLAITTNEHIRLLKQNDINIKHINFG 236 Query: 238 GGLGIAYHSDHRPP---SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GGLGI Y + + P +A + + + E GR LV G+LV++V+ K Sbjct: 237 GGLGIDYQNPQQNPIVDFDGYFARFREFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNK 296 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + FVI+D M + +RP LY A H+I +++ ++ H IVGPICE+ D A Sbjct: 297 VTQGTHFVIIDAGMTELIRPALYQAQHKIAALIDENINQ-KQHYHIVGPICESSDVFAKY 355 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 ++ + GDLL I GAYG V + YN R + E + Sbjct: 356 YQLPKLKRGDLLAIYSAGAYGKVLASEYNLRPSVQEYFI 394 >gi|160942087|ref|ZP_02089402.1| hypothetical protein CLOBOL_06975 [Clostridium bolteae ATCC BAA-613] gi|158434978|gb|EDP12745.1| hypothetical protein CLOBOL_06975 [Clostridium bolteae ATCC BAA-613] Length = 422 Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 94/404 (23%), Positives = 147/404 (36%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPFY Y I +N AF +A+KA N ++ L +G Sbjct: 12 LREIERTYPTPFYLYDEKGIRENAARLKQAFSWNRGYKEYFAVKATPNPFLLNILKDMGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A I+FS +E A + G + Sbjct: 72 GTDCSSMTELMMSRACGFSGSDIMFSSNDTPPEEFAYAEKLGAIINLDDITHIQCLEETL 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ QI + Sbjct: 132 GHIPE---TISCRFNPGGLFKISNDIMDNPGDSKYGMTAEQIGQAFKILKEKGAKHFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G +I I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNEYYPMLAKILFELAVKLKEETGVHIAFINLSGGIGIPYRPDQEPNDILAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + E GRF++ G LVTK I K + K +V +D Sbjct: 249 GDGVRRVYEEILVPAGMDDVALCTELGRFMMGPYGALVTKAIHEKHT-YKEYVGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + + D+VG +CE D A++R + + GDLL+I Sbjct: 308 NLMRPAMYGAYHHITVMGREDEPCTRM-YDVVGSLCENNDKFAIDRMLPEIKKGDLLFIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+G YN +L E+++ +IR T ++ Sbjct: 367 DAGAHGFAMGYNYNGKLKSAELLLKEDGTVEMIRRAETPEDYFA 410 >gi|332184642|gb|AEE26896.1| Diaminopimelate decarboxylase [Francisella cf. novicida 3523] Length = 394 Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 133/373 (35%), Positives = 198/373 (53%), Gaps = 7/373 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP Y Y + +E + + A D + + YA+KAN + ++ G G+D VS G Sbjct: 23 TPCYIYDSRLLEDTFASAKKALDKNFKNAEIHYAIKANHHPKIVDIAKKYGMGIDCVSGG 82 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E+RRA V + IVF+GVGK EI+LA+ + I+ FN ES E++ +++ A S K+ Sbjct: 83 EIRRAFEQNVDPQHIVFAGVGKADWEIELAIDNDIFAFNCESLEEIEVISKIASSKNKQV 142 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIP-IHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 I RVNP+I+A TH ISTG+ +DKFGI I ++ L + I G+ H+GSQ Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFIDVLNWLKNDFQNFDNINIIGLHYHVGSQ 202 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP---SSSDYASLI 260 I + F + + L+ N +I+HI+ GGGLGI Y + + P +A Sbjct: 203 ILNYQVFQSLAITTNEHIKLLKQNDIDIEHINFGGGLGIDYQNPQQNPIVDFDDYFARFR 262 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + K+ E GR LV G+L+++V+ K + D F I+D M + +RP LY A Sbjct: 263 EFFEYCDDVKLHFELGRSLVGQSGVLLSQVLFNKVTQDTHFAIIDAGMTELIRPALYQAQ 322 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 H+I +V+ + D H IVGPICE+ D A ++ + GDLL I GAYG V + Sbjct: 323 HKIEALVDESVD-EKQHYHIVGPICESSDVFAKYYQLPKIKRGDLLAIYSAGAYGKVLAS 381 Query: 381 TYNSRLLIPEIMV 393 YN R + E + Sbjct: 382 EYNLRPTVQEYFI 394 >gi|302554653|ref|ZP_07306995.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM 40736] gi|302472271|gb|EFL35364.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM 40736] Length = 423 Score = 209 bits (531), Expect = 9e-52, Method: Composition-based stats. Identities = 107/418 (25%), Positives = 179/418 (42%), Gaps = 13/418 (3%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 + + + +A TP Y Y T + Y A + +LKAN N +V Sbjct: 5 EFRVQGLPVSAIAEEFGTPLYVYDTDVLRHTYEELR-ALTHPAVDIYLSLKANPNISVCG 63 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 L LG+G ++ S EL A A V AE +F G GKT E++ + +G+ ES E Sbjct: 64 YLGSLGAGAEVSSLVELETARRAGVAAEDTIFLGPGKTRAELEACVAAGLRAIVCESLEE 123 Query: 130 LKTLNQRAVSLGK-KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 L +++ AVS G+ P+ RVNPD + K +FGI + + + L Sbjct: 124 LAEVDEMAVSAGRADVPVMLRVNPDFHTKGSGLAMG-GKPRQFGIDVALLRNAKRVLKGL 182 Query: 189 PGVKISGVDMHIGSQIDQIES-FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 ++ G ++G++ + E H ++L + G + +D GGG GI Y + Sbjct: 183 RRTRVIGFHAYMGTRFLRHEDLIHNTREILAVASALAAETGIELDIVDFGGGFGIPYFDN 242 Query: 248 HRPPSSSDYA-----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 + + A ++ + C++I E GR+L A G VT+ + +K+S + FV Sbjct: 243 EPDLNIPELAAGIDATVTRFLEDHPDCRLINELGRYLTARCGTYVTRALYVKESMGERFV 302 Query: 303 ILDVAMNDFMR---PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + D N M + + + + GP+C D I + Sbjct: 303 VADGGTNHHMAAVGVGSFVKRNFPIRSLTRYHAEPTGAYTVTGPLCTPNDVIGKRVALPE 362 Query: 360 PRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 RPGDL+ +E++GAYG S + S E+MV+ H++R R +L+ + Sbjct: 363 VRPGDLIGVERSGAYGPSASPGLFLSHGFPAEVMVHEGTAHLVRRRDVLDDLLGKQHL 420 >gi|153813582|ref|ZP_01966250.1| hypothetical protein RUMOBE_04004 [Ruminococcus obeum ATCC 29174] gi|149830327|gb|EDM85419.1| hypothetical protein RUMOBE_04004 [Ruminococcus obeum ATCC 29174] Length = 430 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 98/410 (23%), Positives = 148/410 (36%), Gaps = 15/410 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N AF +A+KA N +I+ L G Sbjct: 12 LQEITEKYPTPFHLYDEKGIRENAKALKEAFAWNKGFKEFFAVKATPNPYLIQILQEYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A I+FS E A + G + Sbjct: 72 GCDCSSMTELMLSKAIGCKKGDIMFSSNDTPEAEFRYANEIGGIINLDDITHIKAVEKAV 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ QI + Sbjct: 132 GYIPK---TISCRYNPGGVFKISNDIMDNPGDAKYGMTTEQIFEAFRTLKAKGAENFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A + + + G +I I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNEYYPMLAKVMFELAVKLQKETGAHIGFINLSGGIGIPYRPDQTPNDIRVI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++ G LVTK I K + K ++ +D Sbjct: 249 GEGVRKVYEEVLVPAGMGDVAIYTELGRFMMGPYGCLVTKAIHEKHT-HKEYIGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + DI G +CE D A++R + GDLL I Sbjct: 308 NLMRPAMYGAYHHITVMGKEDQPCDR-LYDITGSLCENNDKFAIDRYLPKIDMGDLLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE-LDSIP 417 TGA+G YN +L EI++ F +IR T ++ D P Sbjct: 367 DTGAHGFAMGYNYNGKLKSAEILLHEDGTFDMIRRAETPRDYFATFDCFP 416 >gi|291531190|emb|CBK96775.1| Diaminopimelate decarboxylase [Eubacterium siraeum 70/3] Length = 423 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 93/406 (22%), Positives = 148/406 (36%), Gaps = 17/406 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++ + TPF+ Y I + +AF +A+KA N +++ L G Sbjct: 12 LEEIIKQIPTPFHIYDEKGIRETARKLYDAFSWNKGFREYFAVKATPNPYIMEILKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+FS ++ LA + G + Sbjct: 72 GFDCSSYTELMLSDKVGAKQHDIMFSSNATPDEDFKLAYKLGAIINLDDFTHIDVL---- 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHK--KISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 G I R NP T + + K+ K+G+ QI Y + Sbjct: 128 DKLTGIPETICCRYNPGGEFKTSEKGNVMDTPKDAKYGMTHEQIIEAYKILKEKGAKRFG 187 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + A L R + G + I++ GG+G+ Y D Sbjct: 188 MHAFLASNTLTNEYYPVLAGILFRTAVEIKEKTGVQLSFINLSGGVGVPYKPDQPANDIK 247 Query: 255 DYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + + + I E GR+++A G LV K I K + + A Sbjct: 248 VIGEGVRKAYEEILVPAGMGDVAIFTELGRYMLAPNGALVAKAIREKHIYKEYIGLDACA 307 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 N RP +Y AYH I + H DI G +CE D A++R + GD++Y Sbjct: 308 ANLM-RPAIYGAYHHITVMGKENQPCDH-KYDITGGLCENCDKFAVDRMLPKIDIGDIIY 365 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 I TGA+G YN +L E+++ F +IR T ++ Sbjct: 366 IHDTGAHGFSMGYNYNGKLRSAEVLLKEDGSFKLIRRAETPKDYFA 411 >gi|320547384|ref|ZP_08041673.1| diaminopimelate decarboxylase [Streptococcus equinus ATCC 9812] gi|320447980|gb|EFW88734.1| diaminopimelate decarboxylase [Streptococcus equinus ATCC 9812] Length = 413 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 101/404 (25%), Positives = 160/404 (39%), Gaps = 18/404 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LEK+ TPF+ Y I + + AF +A+KA A++K L Sbjct: 11 LEKITTKFPTPFHLYDEKGIREKARALNKAFSWNKGFKEYFAVKATPTPAILKILQEENC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D +E EL + I+FS E A + G + + Sbjct: 71 GVDCATEVELLMSHKLGFT--DIMFSSNDTPAREFQYAKEIGATINLDA----YEHIAFL 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G ++ R NP + I +E KFG+ Q+ + Sbjct: 125 KEVAGLPETVSLRYNPGGVFSLGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKYFGIH 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G ++ I++ GG+G+ Y + + + Sbjct: 185 SFLASNTVTNDYYPELARQLFELAVEVKEKTGVSVSFINLSGGVGVNYRPEQKANDIAVI 244 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ F + KI E GRF++A G+LVTKV K +T++ +D + Sbjct: 245 GEGVHRVFDEVLVPAGLGNVKIFTELGRFMLAPHGLLVTKVRHRK-ETYRTYIGVDASAV 303 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +YDAYH I + NP G D+VG +CE D A R++ R GD+L I Sbjct: 304 NLMRPAMYDAYHHITNMTNPNGK--LEVVDVVGSLCENNDKFAKQRELPQARVGDMLVIH 361 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI+ +IR T ++ Sbjct: 362 DTGAHGFSMGYQYNGRLRSAEILYQEDGSARLIRRAETPEDYFA 405 >gi|226356218|ref|YP_002785958.1| diaminopimelate decarboxylase [Deinococcus deserti VCD115] gi|226318208|gb|ACO46204.1| putative Diaminopimelate decarboxylase (DAP decarboxylase) [Deinococcus deserti VCD115] Length = 379 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 116/391 (29%), Positives = 180/391 (46%), Gaps = 26/391 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 TP Y Y ++ AF D V YA+KAN N +++ L G G + VS Sbjct: 14 RFGTPLYVYDAAELDAALGRVRAAFG--DARVHYAMKANPNLHLLRRLQAAGVGFECVSP 71 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GE+ RA V E+++ +G K+ E + G + L Sbjct: 72 GEIARAEHLGVAGEKLIINGPAKSDAEYAAGARLGATFVVDR--------EEEVGLLPSG 123 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + RVNP ++ +TH ++TG + KFG+ + Q + T + G+ +HIGS Sbjct: 124 SRALVRVNPALSVSTHDHLATGSEGSKFGVTLEQAPRVLEALRTAGHTAL-GLHVHIGSA 182 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 I F AF L DL Q G G + + +++ + + Sbjct: 183 IRDAADFTAAFGRLSDLRSQTGPLAVLDAGGGWGLGADLPGIAREAHAAAAVFGA----- 237 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ +EPGR+LVA G L+T+V+ K++ + FV++D M + MRP LY A H + Sbjct: 238 ------QLWVEPGRYLVAQAGTLLTRVVGTKRT-GRPFVLVDAGMTELMRPMLYGAEHPV 290 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + AG D+ GP CE+GD +A + P GDLL I + GAYGA SGTY Sbjct: 291 TPLWEGAGHSC---WDVAGPACESGDLLARAVTLPTPSRGDLLAIGEAGAYGAAMSGTYL 347 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 +R E++ NG ++H+IR R T Q++ + Sbjct: 348 TRSRPAEVLWNGDEWHLIRKRETPQDVWASE 378 >gi|310766546|gb|ADP11496.1| diaminopimelate decarboxylase [Erwinia sp. Ejp617] Length = 417 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 122/416 (29%), Positives = 186/416 (44%), Gaps = 29/416 (6%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 +L LA P + Y + I + FD +V +A KA SN +++ + Sbjct: 14 GENLLPLARRYAGPLWAYDASIISERISQLQQ-FD----VVRFAQKACSNVHILRLMRAA 68 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G +D VS GE+ RALAA A +DE LA +G V + + Sbjct: 69 GVKVDSVSLGEIERALAAGYQAGGDEIVFTADLLDEATLARVAG---LKVPVNAGSVDML 125 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + P+ RVNP +K +TG + K GI + A +K+ Sbjct: 126 HQLGQVSAGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDMALALE-AMQKYQLKLV 184 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+ MHIGS + + ++ + Q+ + G ++Q I GGGL I YH + Sbjct: 185 GIHMHIGSGV----DYAHLEQVCDAMVNQVVNFGQDLQAISAGGGLSIPYHFGEETIDTR 240 Query: 255 DYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 Y L K+ +EPGRFLVA+ G+LV++V ++K + FV++D Sbjct: 241 HYFGLWDAARQRVERHLGHPVKLEIEPGRFLVAESGVLVSQVRAVKNMGSRHFVLVDAGF 300 Query: 309 NDFMRPTLYDAYHEINYIV---NPAGDRLHIHADIVGPICETGDFIA-------LNRKIA 358 ND MRP++Y +YH I+ I + + + + GP+CE+GD R + Sbjct: 301 NDLMRPSMYGSYHHISAIAGDGRTLDEMNSVESVVAGPLCESGDVFTQLEGGKVETRALP 360 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD L TGAYGA S YNSR L+PE++ Q IR T EL+ L+ Sbjct: 361 AVQVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGQPRQIRRAQTVAELLALE 416 >gi|297622385|ref|YP_003703819.1| diaminopimelate decarboxylase [Truepera radiovictrix DSM 17093] gi|297163565|gb|ADI13276.1| diaminopimelate decarboxylase [Truepera radiovictrix DSM 17093] Length = 385 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 112/397 (28%), Positives = 177/397 (44%), Gaps = 21/397 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L ++A TP Y Y AI A + YA+KAN AV++ LA G G Sbjct: 9 LHRIAERYSTPTYVYDLDAIGDRVARLRAALP--TAELLYAVKANPCGAVLRHLAAAGLG 66 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +++S GEL RA A P RI+ G + + A G + S+ QR Sbjct: 67 AEVISVGELARARRAGFPEGRILLGGPRQDPPLVAAAWGVGWVSLDNPSQWRGW---QRF 123 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP ++ TH+ ++TG KFG+P ++ +L A + Sbjct: 124 AAREGAPRFLLRLNPGLDPRTHEHLATGAARSKFGMPFGELAALGAA--------LGEHL 175 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 I + A++ + L + + +D+GGG + + A Sbjct: 176 AGFHVHIGSQITELGAYEPVFAQLGALLTRFPHADTLDLGGGFAVPGFALPEFS-----A 230 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + +++LEPGRFLVA+ G+L+T+V+ +K+ VI D M D +RP LY Sbjct: 231 RVRAFLAQVPFRRLLLEPGRFLVAESGVLLTRVLHVKEGP-VRHVIADAGMADLLRPALY 289 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 A H + + A D AD+ GP+CE D +A + PG LL +E+ GAYG Sbjct: 290 GAQHPVRVLG--AADGASGSADLDGPLCENADRLARGVALPALTPGTLLAVEQAGAYGFA 347 Query: 378 QSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + Y S L E++V G + + R R T +L++L+ Sbjct: 348 MASNYASSLRPAEVVVAGGEVRLARRRETPDDLVQLE 384 >gi|330836743|ref|YP_004411384.1| diaminopimelate decarboxylase [Spirochaeta coccoides DSM 17374] gi|329748646|gb|AEC02002.1| diaminopimelate decarboxylase [Spirochaeta coccoides DSM 17374] Length = 422 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 102/410 (24%), Positives = 166/410 (40%), Gaps = 14/410 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 ++++A + TPFY Y + FS F YA+KA N ++K LA G Sbjct: 13 IQRIADSLPTPFYLYDEKGLRDTARYFSEMFSWAPGFRNYYAVKACPNPVILKMLAGHGF 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S ELR + AA + E+++F+ DE A + G + L Sbjct: 73 GADCSSLPELRLSRAAGLSGEKLMFTSNDTADDEFREAYEMGAVINLDDITHIDALLRAT 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + + T I E K+G+ QI Y L + + Sbjct: 133 DGKVPELISFRYNPGA---ERTGNAIIGNPVEAKYGVTTDQIVGAYVRMKELGSKRFALH 189 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M +++D A L + + I+ ID+GGG+GI Y D +P Sbjct: 190 TMVASNELDGSYIVETARMLFALCIRLKKEADVRIEFIDMGGGIGIPYKPDQKPMDLGMV 249 Query: 257 ASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + I+ E GR + G LV++V + K +V LD M Sbjct: 250 SREMEALYNEMIIPAGLAPLGIVFECGRCITGPHGYLVSRVRHVAHK-YKDYVGLDACMA 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 D MRP LY AYH I + ++ D+ G +CE D A++R++ +PGD++ I Sbjct: 309 DLMRPALYGAYHHITVLGKEGVPADNV-YDVTGSLCENNDKFAIDRRLPPVKPGDVVVIH 367 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDSIPA 418 GA+G YN++L E ++ +IR T+ + + P Sbjct: 368 DAGAHGHAMGFNYNAKLRPAEYLLKADGTVVMIRRAQTYDDYVATLRFPD 417 >gi|259909546|ref|YP_002649902.1| diaminopimelate decarboxylase [Erwinia pyrifoliae Ep1/96] gi|224965168|emb|CAX56700.1| Diaminopimelate decarboxylase [Erwinia pyrifoliae Ep1/96] Length = 417 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 119/416 (28%), Positives = 186/416 (44%), Gaps = 29/416 (6%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 +L LA P + Y + I + FD +V +A KA SN +++ + Sbjct: 14 GENLLPLARRYAGPLWAYDASIISERISQLQQ-FD----VVRFAQKACSNVHILRLMRAA 68 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G +D VS GE+ RALAA A T D +D A + + V + + Sbjct: 69 GVKVDSVSLGEIERALAAGYQAGGDEI---VFTADLLDEATLARVAELKVPVNAGSVDML 125 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + P+ RVNP +K +TG + K GI + A +K+ Sbjct: 126 HQLGQVSAGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDMALALE-AMQKYQLKLV 184 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+ MHIGS + + ++ + Q+ + G ++Q I GGGL + YH + Sbjct: 185 GIHMHIGSGV----DYAHLEQVCDAMVNQVVNFGQDLQAISAGGGLSVPYHFGEETIDTR 240 Query: 255 DYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 Y L K+ +EPGR+LVA+ G+LV++V ++K + FV++D Sbjct: 241 HYFGLWDAARQRVERHLGHPVKLEIEPGRYLVAESGVLVSQVRAVKNMGSRHFVLVDAGF 300 Query: 309 NDFMRPTLYDAYHEINYIV---NPAGDRLHIHADIVGPICETGDFIA-------LNRKIA 358 ND MRP++Y +YH I+ I + + + + GP+CE+GD R + Sbjct: 301 NDLMRPSMYGSYHHISAIAGDGRALDEMNSVESVVAGPLCESGDVFTQLEGGKVETRALP 360 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD L TGAYGA S YNSR L+PE++ Q IR T EL+ L+ Sbjct: 361 AVQVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGQPRQIRRAQTVAELLALE 416 >gi|258645622|ref|ZP_05733091.1| diaminopimelate decarboxylase [Dialister invisus DSM 15470] gi|260402982|gb|EEW96529.1| diaminopimelate decarboxylase [Dialister invisus DSM 15470] Length = 424 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 110/408 (26%), Positives = 162/408 (39%), Gaps = 13/408 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 + ++A V TPF+ Y I N AF D +A+KA N ++K+L LG Sbjct: 13 VREIAAVYGTPFHLYDEKGISDNVKRLQKAFSWSSDFHEYFAVKATPNPWIMKSLKKLGV 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A + E IVFS +E A + G ++ L+ Sbjct: 73 GADCSSMAELILAETVGITGEEIVFSSNDTPDEEFLKAHELGAIINLD----DISNLDDM 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I FR NP + I +E K+G+ Q+ A+A I Sbjct: 129 ERLHLVPKRICFRYNPGPDLARGNAIIGTPQEAKYGMTREQLLKCVAWAKNKGIGYIGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M I ++++ + + ++G + ID GGG+GI Y + P Sbjct: 189 TMVISAELELPGLLGTISMMFDLANEIRNTHGVTVSFIDFGGGIGIPYRPEQEPVDLEGL 248 Query: 257 ASLIHQYFGNLQCKI-----ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + F E GR + G LVTK I K + ++ +D M D Sbjct: 249 GEGAKKLFEEKMRGFENTRICFECGRMITGPYGYLVTKAIHYKNI-YRDYIGVDACMADL 307 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 MRP +Y AYH ++ + + I D+VG +CE D A+ R++ GDL+ I T Sbjct: 308 MRPGIYGAYHHVSVLGKGNLPKNKI-YDVVGSLCENSDKFAIQRELPEIEMGDLIIIHDT 366 Query: 372 GAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIELDSIPA 418 GA+G YN RL EIMV IR T +L + P Sbjct: 367 GAHGHSMGYNYNGRLRHQEIMVHEDGTVQQIRRNETLHDLFATLTYPE 414 >gi|188534898|ref|YP_001908695.1| diaminopimelate decarboxylase [Erwinia tasmaniensis Et1/99] gi|188029940|emb|CAO97824.1| Diaminopimelate decarboxylase [Erwinia tasmaniensis Et1/99] Length = 417 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 122/416 (29%), Positives = 183/416 (43%), Gaps = 29/416 (6%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 +L LA P + Y + I + FD +V +A KA SN +++ + Sbjct: 14 GENLLPLARQYGGPVWAYDASIIGERISQLQQ-FD----VVRFAQKACSNIHILRLMQSA 68 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G +D VS GE+ RALAA A +DE LA G V + + Sbjct: 69 GVKVDSVSLGEVERALAAGYQAGGDDIVFTADLLDEPTLARIVG---LKVPVNAGSVDML 125 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + P+ RVNP +K +TG + K GI + A +K+ Sbjct: 126 HQLGKASAGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHGDMALALE-AIQKYQLKLV 184 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+ MHIGS + + ++ + Q+ G ++Q I GGGL I YH + Sbjct: 185 GIHMHIGSGV----DYAHLEQVCDAMVSQVIDFGQDLQAISAGGGLSIPYHFGEETIDTQ 240 Query: 255 DYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 Y L K+ +EPGRFLVA+ G+LV++V ++K + FV++D Sbjct: 241 HYFGLWDAARQRVAQHLGHAVKLEIEPGRFLVAESGVLVSQVRAVKNMGSRHFVLVDAGF 300 Query: 309 NDFMRPTLYDAYHEINYIV---NPAGDRLHIHADIVGPICETGDFIALN-------RKIA 358 ND MRP++Y +YH I+ I + + + + GP+CE+GD R + Sbjct: 301 NDLMRPSMYGSYHHISAIAGDGRALDEVNTVESVVAGPLCESGDVFTQREGGKVETRALP 360 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD L TGAYGA S YNSR L+PE++ Q IR T EL+ L+ Sbjct: 361 AVQVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGQPRQIRRAQTVAELLALE 416 >gi|325000566|ref|ZP_08121678.1| diaminopimelate decarboxylase [Pseudonocardia sp. P1] Length = 443 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 103/416 (24%), Positives = 192/416 (46%), Gaps = 15/416 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L V + +LA+ TP + I + +A G + YA KA + Sbjct: 33 GDLRIGGVDVHELANRFGTPLQVLDSADIRSRCRAYHDALPG--AEIIYAGKAFLCRGTA 90 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + +A G +D S GE+ A AA VP ERI+ G KT +++ A + + ++S Sbjct: 91 RLVAQEGCSIDACSGGEVAVAAAAGVPGERILLHGTVKTDEDLKAAFAARVGRIVIDSVG 150 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E+ + + ++ + RV PDI+A TH ++T + FGI ++ + Sbjct: 151 EIDRIAA---AAPRRQKVLLRVRPDIDARTHPGLTTATADSWFGIAAGEVLAAVGRILAR 207 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSD 247 P +++ G+ H+GSQ+ I + A + ++ +R+ + +D+GGG + Y Sbjct: 208 PQLRLIGLHCHLGSQVCSISRYEAAATRMVEVLAAVRARYGLELPQLDLGGGHAVGYAEG 267 Query: 248 HRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 R + + G ++ ++++EPGR +VA G+ + +V ++++S ++ Sbjct: 268 ERSTDPVSFGRAVRRAVSGACTAHGIVEPQLLVEPGRAIVARAGVTLYRVAAVERSGGRS 327 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-L 359 V++D M+D RP LY A + + + A + G CE+ D +A ++ Sbjct: 328 TVLVDGGMSDNPRPALYGARYPVRLVGR-ATRADLEPMRVAGRHCESTDVLADAVRLPAD 386 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GD+L + +GAY A + TYN +P + V+G + R T ++L+ D Sbjct: 387 LTAGDVLAMPVSGAYQASMASTYNQIPRVPVVAVSGGATLPLLRRDTPEDLLRRDI 442 >gi|261415933|ref|YP_003249616.1| diaminopimelate decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372389|gb|ACX75134.1| diaminopimelate decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326360|gb|ADL25561.1| diaminopimelate decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 419 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 114/417 (27%), Positives = 172/417 (41%), Gaps = 28/417 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L K A TP + Y IE+ FD V +A KA N +V+ + LG Sbjct: 10 LLKAASEYGTPLWIYDRATIERAVKDVQ-VFD----TVRFAQKACPNLSVVSLIRKLGCV 64 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTI--DEIDLALQSGIYCFNVESESELKTLNQ 135 +D VS GE+ RAL A + D D + +++ + Q Sbjct: 65 VDAVSAGEIVRALKAGFKGGQQKGKVPEIVYTADIFDRDALELVKKYDIAVNVGSPDMIQ 124 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + G K+ + RVNP +K +TG K GI QI A + Sbjct: 125 QLADFGVKSELTIRVNPGFGHGHSRKTNTGGDLSKHGIWHEQIKDCIKLAQSNGMWI--- 181 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR------ 249 + I F ++ + R G +++ I GGGL I YH + + Sbjct: 182 --TGLHMHIGSGTDFEHLAQVCDAMVDASRHLGSHLRTISAGGGLPIPYHEEEKGNRIDV 239 Query: 250 --PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 D A Q + +EPGR+LVA+ G LV ++ ++KK F +LD Sbjct: 240 KAYYDLWDNARKRIQQSIGHDVHLEVEPGRYLVAESGYLVAEIRAVKKQGSNLFYLLDAG 299 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGD-RLHIHADIVGPICETGDFIALN-------RKIAL 359 D +RP+ Y +YH I+ + + + A + GP+CE+GD RK+ Sbjct: 300 FTDLVRPSFYGSYHAISVVARDGRELNETVDAVVAGPLCESGDVFTQEEGGFVVTRKLPK 359 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL + GAYGA S YNSR E M + ++R R TF++L++ D I Sbjct: 360 AQVGDLLILHDAGAYGAAMSSNYNSRRYAAETMYTKGEIKLVRERQTFEQLLQNDRI 416 >gi|315608892|ref|ZP_07883865.1| diaminopimelate decarboxylase [Prevotella buccae ATCC 33574] gi|315249419|gb|EFU29435.1| diaminopimelate decarboxylase [Prevotella buccae ATCC 33574] Length = 386 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 142/367 (38%), Positives = 196/367 (53%), Gaps = 7/367 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMV-CYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TPFY Y T + + + ++ D V YA+KAN+N V+ + G G D VS GE Sbjct: 16 TPFYYYDTELLRRTLKSINDEAARHDGFVVHYAVKANANPKVLNVICQAGLGADCVSGGE 75 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + AL A PA + VF+GVGK+ EI+LAL I+CFNVES EL+ +N+ A G A Sbjct: 76 IEAALRAGFPASKTVFAGVGKSDWEINLALDKNIFCFNVESIPELEIINELAARKGTTAR 135 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 +AFR+NP+I A+TH I+TG E+KFGI + + S+ A+TL V G+ HIGSQI Sbjct: 136 VAFRINPNIGAHTHANITTGLAENKFGIALEDMDSVIERAATLEHVAFVGLHFHIGSQIL 195 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F + DL L ++H++VGGGLGI YH +R P A Sbjct: 196 DMGDFKALCNRINDLQAHLEHRHIRLEHLNVGGGLGIDYHHPNRVPVPDFKAYFDTYARH 255 Query: 266 ---NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ E GR +V +G L+T+ + +K+ A K F I+D M D +RP LY AYH Sbjct: 256 LKLREGQRLHFELGRAVVGQMGTLITRTLYVKQGAAKQFAIVDAGMTDLIRPALYQAYH- 314 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I N + D+VGPICE+ D A + GDL+ I GAYG + + Y Sbjct: 315 --KIENLSSQEPPETYDVVGPICESSDVFAKAVDLNKAHRGDLMAIRSAGAYGEIMASGY 372 Query: 383 NSRLLIP 389 N R L Sbjct: 373 NCRQLPA 379 >gi|20302394|emb|CAB82467.2| diaminopimelate decarboxylase [Staphylococcus aureus] Length = 398 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 113/404 (27%), Positives = 184/404 (45%), Gaps = 21/404 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 TP Y I + + AF G+ + YA KA + ++K +A LD+VS Sbjct: 2 FGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVS 61 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 EGEL AL A RI F G KT EI AL++ I F ++S E++ +++ A Sbjct: 62 EGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTV- 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY--ASTLPGVKISGVDMHI 200 + RVNP + A+TH+ I TG+++ KFG+ I + A +K+ GV HI Sbjct: 121 --QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHI 178 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 GSQI+ E+F + K++ ++ ++ +++GGG GI Y I Sbjct: 179 GSQIEGTEAFIETAKIVLRWLKEQG---IQVELLNLGGGFGIKYVEGDESFPIESGIKDI 235 Query: 261 HQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV-ILDVAMNDFM 312 +I +EPGR +V + G+ + +V +IK+ + +D M+D + Sbjct: 236 TDAIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHI 295 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKT 371 R LYDA ++ + + I G +CE+GD I + K+ + GD L I T Sbjct: 296 RTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILST 353 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY + YN + + + R + ++LI D+ Sbjct: 354 GAYHYSMASNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIINDT 397 >gi|148998508|ref|ZP_01825949.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70] gi|168484277|ref|ZP_02709229.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC1873-00] gi|168487115|ref|ZP_02711623.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC1087-00] gi|168576622|ref|ZP_02722488.1| diaminopimelate decarboxylase [Streptococcus pneumoniae MLV-016] gi|225857551|ref|YP_002739062.1| diaminopimelate decarboxylase [Streptococcus pneumoniae P1031] gi|307068586|ref|YP_003877552.1| diaminopimelate decarboxylase [Streptococcus pneumoniae AP200] gi|147755701|gb|EDK62747.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70] gi|172042473|gb|EDT50519.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC1873-00] gi|183569971|gb|EDT90499.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC1087-00] gi|183577610|gb|EDT98138.1| diaminopimelate decarboxylase [Streptococcus pneumoniae MLV-016] gi|225725810|gb|ACO21662.1| diaminopimelate decarboxylase [Streptococcus pneumoniae P1031] gi|301794920|emb|CBW37381.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae INV104] gi|306410123|gb|ADM85550.1| Diaminopimelate decarboxylase [Streptococcus pneumoniae AP200] gi|332072163|gb|EGI82649.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA41301] gi|332199403|gb|EGJ13480.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA47368] gi|332199989|gb|EGJ14063.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Streptococcus pneumoniae GA47901] Length = 416 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 158/410 (38%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERVAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHISNVTH--PDGPAEAVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|325188030|emb|CCA22573.1| diaminopimelate decarboxylase putative [Albugo laibachii Nc14] Length = 423 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 99/415 (23%), Positives = 170/415 (40%), Gaps = 16/415 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLG 75 L LA TP Y +I N + F D +A+KA N A+IK L G Sbjct: 13 LVSLASTYGTPLQLYDEKSIRDNARHLIDTFRRNFTDFREYFAVKALPNPAIIKILHQEG 72 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G+D S EL + + I+F+ + +++ +A + + + + Sbjct: 73 CGMDCSSTAELHICKELGIEGKDIIFTSNFTSKEDLAIAYDQKVIINLDDITLVDALV-E 131 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + G + KFG+ QI Y A + G Sbjct: 132 IRGKCPDLISFRLNPGLGRTDSETVSNILGGPDAKFGVAPFQIVEAYRKAKQAGAKRF-G 190 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + M GS + + + + +L D Q R + +++GGGLGI Y D +P Sbjct: 191 IHMMTGSCVMDQDYWRQTVTILIDTVDQLRRELNIEFEFVNLGGGLGIPYQPDEKPVDIE 250 Query: 255 DYASLIHQYFGNLQ--------CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 + ++ Q F + ++ +E GR++ G L+T+ +IK+S + +D Sbjct: 251 SISRMLRQLFDEAKVKHNLSVLPQLCMENGRYMTGPFGWLITRCQAIKESYG-RYYGVDA 309 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 M + MRP +Y++YH I + + + +VG +CE D+ A NR + + GDL Sbjct: 310 CMANLMRPGMYNSYHHITIPARESSE-ERSPSHVVGTLCENNDWFAKNRSLPKAQVGDLF 368 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIELDSIPAWL 420 I TGA+ YN +L PE+++ + +IR R T++ L +P L Sbjct: 369 VIHDTGAHAHSMGFQYNGKLRAPELLILHDGTPFVIRERETYKSLYGNCVLPPGL 423 >gi|306830172|ref|ZP_07463356.1| diaminopimelate decarboxylase [Streptococcus mitis ATCC 6249] gi|304427698|gb|EFM30794.1| diaminopimelate decarboxylase [Streptococcus mitis ATCC 6249] Length = 418 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 98/410 (23%), Positives = 161/410 (39%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FISREDLETIVAEFPTPFHLYDEKGIREKARAVNQAFSWNEGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LKEEGCGVDCSSYVELLMSHKLGFVGPEIMFSSNNTPDQEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTRDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + + +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELSRQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G+LVTKV KK+ +T++ Sbjct: 241 NDIAMIGEGVRKVYEEVLTPVGLGQVKIFTELGRFMLAPHGVLVTKVTHKKKT-YRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + +RP +Y AYH + + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLIRPAMYGAYHHVTNLTH--PDGPVEVVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|255658989|ref|ZP_05404398.1| diaminopimelate decarboxylase [Mitsuokella multacida DSM 20544] gi|260848948|gb|EEX68955.1| diaminopimelate decarboxylase [Mitsuokella multacida DSM 20544] Length = 419 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 92/410 (22%), Positives = 153/410 (37%), Gaps = 16/410 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y AI +N AF +A+KA N +++ L G+ Sbjct: 13 LEEIIKKYPTPFHIYDEHAIRENIRKLQKAFAWAPRFREQFAVKALPNPRILQVLHEEGA 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + + I+ + DE A++ G + Sbjct: 73 GTDNSSLAELVLSEVSGYKGSEILLTSNDTPADEFQKAIELGAIINLDDISHLDYLE--- 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I + I E K+G+ Q+ Y A + Sbjct: 130 --KNAGLPEIICFRYNPGDLIEGNDIIGKPTEAKYGLTRDQLFEAYKMAKEKGVKRFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M ++ A + + G +++ +++GGG+GI Y + P Sbjct: 188 TMVASNERRTEAFVFTAKLMFELAVELKNRLGIHVEFVNIGGGIGIPYRPEEEPVDLEAV 247 Query: 257 ASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 IH+ + + ++ E GR + G LV+ I KK+ K ++ LD M Sbjct: 248 GEGIHKLYDEMMVPEGLGDVAMMTESGRAITGPAGWLVSTAIHEKKT-YKDYIGLDSCMA 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I H+ D+ G +CE D A++RK+ GD + I Sbjct: 307 NLMRPAMYGAYHHITIAGKENEPCDHV-YDVTGSLCENNDKFAIDRKLPKIDIGDRVIIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIELDSIPA 418 TGA+G+ YN +L E+++ +IR T + P Sbjct: 366 DTGAHGSAMGFNYNGKLWCAELLLHEDGSVELIRRAETLDDYFATLKYPG 415 >gi|329122097|ref|ZP_08250705.1| diaminopimelate decarboxylase [Dialister micraerophilus DSM 19965] gi|327466904|gb|EGF12420.1| diaminopimelate decarboxylase [Dialister micraerophilus DSM 19965] Length = 415 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 115/417 (27%), Positives = 165/417 (39%), Gaps = 13/417 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAV 67 L L K+A TPFY Y IE N F +F + +A+KA N + Sbjct: 4 KKLPITEHRLYKIAEEYGTPFYIYDQKGIEDNINNFKKSFSWCSNFYKYFAVKATPNPWI 63 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 +K L ++G G D S EL A A + + IVFS +E A G + Sbjct: 64 LKLLHNMGIGADCSSMAELILAEAVGLKGKEIVFSSNNTADEEFIKANSLGAIINLDDIS 123 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 I+FR NP + ++ K+G+ Q+ A Sbjct: 124 M----FGDLERLKIIPEKISFRYNPGNKVSIGNNFIGKPEDAKYGMTKEQLLESVQIAKK 179 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 L I M + S++ L + + ID GGG+GI YH D Sbjct: 180 LKIPFIGIHTMIVSSELTLDVLIANIRMLFELAIEIREKFNVIVDFIDFGGGIGIPYHPD 239 Query: 248 HRPPSSSDYASLIHQYFGNLQ-----CKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 R + + H+ F ++ ++ E GR + G LVTKVI K K ++ Sbjct: 240 DRAVNLFELGKRTHELFKSMMSGFEKTQLSFECGRAITGPYGYLVTKVIHHKNI-YKKYI 298 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +D M D MRP +Y AYHEI + I DIVG +CE D A+NRK+ Sbjct: 299 GVDACMADLMRPGIYGAYHEITVCSKEDTNETQI-YDIVGSLCENNDKFAINRKLPKILK 357 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDSIPA 418 GDL+ I TGA+G YN +L E++++ IR T +L P Sbjct: 358 GDLIVIHDTGAHGHSMGFNYNGKLRHQELLLHSDGTIQKIRRNETLNDLFSTLDFPG 414 >gi|212550815|ref|YP_002309132.1| diaminopimelate decarboxylase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549053|dbj|BAG83721.1| diaminopimelate decarboxylase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 382 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 133/366 (36%), Positives = 195/366 (53%), Gaps = 6/366 (1%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTPFY Y + K D + YA+KAN N ++ + +G G D VS GE Sbjct: 13 QTPFYFYDIELLRKTLQVVVLEAAKYDYHIHYAVKANKNPRILSIIREMGLGADCVSGGE 72 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + L AE++VF+GVGKT EI+L L+ I+CFNVES EL +N A + A Sbjct: 73 IETVLNEGFSAEKVVFAGVGKTDWEINLGLEKDIFCFNVESIPELVVINHLACAKNTIAR 132 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 +A R+NP+I+++TH I+TG K++KFGI + Q+ + STL +++ G+ HIGSQI Sbjct: 133 VALRINPEIDSHTHHYITTGIKDNKFGINLDQLDRVLDMLSTLSSIQLVGIHFHIGSQIM 192 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP---SSSDYASLIHQ 262 + F + +L Q+ G ++HI+ GGGLGI Y + P + Sbjct: 193 DLTPFRLLCSQVNELQQKFIQRGIFLKHINFGGGLGIDYENPDENPIPSFREYFNVFRTH 252 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 +F +I E GR +V G L++KV+ +K+ + K FVILD + +RP Y++YH Sbjct: 253 FFVLNNQQIHFELGRSIVGQCGNLISKVLYVKEGSVKRFVILDAGFTELIRPAFYESYH- 311 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I N + + D+VGPICE+ D A R + GD++ I GAYG V + Y Sbjct: 312 --VIENLSLEEATDVYDVVGPICESSDCFAKQRVLKKTYRGDIIAIRSAGAYGEVMASQY 369 Query: 383 NSRLLI 388 N R L Sbjct: 370 NCRQLP 375 >gi|257053752|ref|YP_003131585.1| diaminopimelate decarboxylase [Halorhabdus utahensis DSM 12940] gi|256692515|gb|ACV12852.1| diaminopimelate decarboxylase [Halorhabdus utahensis DSM 12940] Length = 419 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 110/397 (27%), Positives = 190/397 (47%), Gaps = 7/397 (1%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA +TP Y T ++ NY F AF D V YA KA++ +AV+ L +G+ Sbjct: 18 LLALAAEYETPLYVLETGRVQANYRRFDAAFP--DAEVMYAAKAHTGRAVLSALLDVGAD 75 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 ++ + GEL+RA+ A + ++ V ++D A++ + + R Sbjct: 76 IECAARGELQRAIEAGADPNTLQYTAVNPPAADLDYAVELADEYPGLTITGGARDTFDRL 135 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + G +A R+NP I H+K+ K+ KFGIP ++ L A + G+ Sbjct: 136 QARGYDGRVAIRINPGIGTGHHEKV-ATGKDAKFGIPAERVPDLAADL--RERFDLVGLH 192 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 H+GS + E A L + +++ +D GGG G+ Y D P A Sbjct: 193 AHVGSGVLTGEVDEHARALGKVADLAREVGDGDLEFVDFGGGFGVPYREDEPPLDIEVVA 252 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + + G+L + EPGR++VAD +++ +V ++K++ + T V +D +++ +RP ++ Sbjct: 253 ETVREAVGDLNATMKFEPGRYVVADAELILARVNTVKEAPETTVVGVDASLSTLIRPAMF 312 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 D+YH I + A DR + GP C + D A +R IA P D+L I GAYG Sbjct: 313 DSYHPIRNVS--APDRADEAVSVGGPCCTSADVFATDRPIARPEREDILAIGNAGAYGYE 370 Query: 378 QSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + ++S+ E+ + G I+R R T ++ ++ Sbjct: 371 LANNFHSQPRPAEVAIEGDGARIVRRRETMADVTRVE 407 >gi|282881322|ref|ZP_06290002.1| diaminopimelate decarboxylase [Prevotella timonensis CRIS 5C-B1] gi|281304798|gb|EFA96878.1| diaminopimelate decarboxylase [Prevotella timonensis CRIS 5C-B1] Length = 392 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 137/366 (37%), Positives = 200/366 (54%), Gaps = 7/366 (1%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 QTP+Y Y T + + D V YALKAN++ +++ ++ G G D VS G Sbjct: 14 QTPYYYYDTQLLHRTLDAIKRETDKHAHFEVHYALKANAHPQLLQQISQAGFGADCVSGG 73 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E+ AL A PA +IVF+GVGK DEI LALQ I+CF+VES EL+ +N A + A Sbjct: 74 EITAALKAGFPANKIVFAGVGKRDDEIRLALQQHIFCFHVESLEELEVVNALAAQEQQVA 133 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 +A R+NP++ A+TH I+TG E+KFGIP+ Q+++ S L + + G+ HIGSQI Sbjct: 134 RVALRINPNVGAHTHAHITTGLSENKFGIPLTQMNTAIDACSRLEHITLIGLHFHIGSQI 193 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR--PPSSSDYASLIHQ 262 + F + + +L +L + ++++I+VGGGLG+ Y P Y Q Sbjct: 194 TDMSDFVSECQRINELQTELNQHDIHLRYINVGGGLGVNYDDPDGGAIPDFQAYFDTFAQ 253 Query: 263 YFGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + + + I E GR +VA G L++KV+ IK+ K F I+D M + +RP LY A+H Sbjct: 254 HLHYTKEQTIHFELGRSVVAQCGSLISKVLYIKEGEHKKFCIIDAGMTELLRPALYQAHH 313 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 I N + D+VGPICE+ D +A + GD+L I GAYG + Sbjct: 314 ---KIENRSSQGALETYDVVGPICESSDVMAQGVLLPSCHRGDILAIRSAGAYGESMASQ 370 Query: 382 YNSRLL 387 YN R L Sbjct: 371 YNGRPL 376 >gi|148985558|ref|ZP_01818747.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71] gi|147922278|gb|EDK73399.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71] gi|301800739|emb|CBW33387.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae OXC141] Length = 416 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 158/410 (38%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERVAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHISNVTH--PDGPAEAVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGEARQIRRAERPEDYFA 407 >gi|295109827|emb|CBL23780.1| Diaminopimelate decarboxylase [Ruminococcus obeum A2-162] Length = 430 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 97/410 (23%), Positives = 151/410 (36%), Gaps = 15/410 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N + AF +A+KA N +I+ L G Sbjct: 12 LQEITERFPTPFHLYDERGIRENAMALKEAFAWNKGFKEFFAVKATPNPYLIQILQEYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A I+FS E A + G + Sbjct: 72 GCDCSSMTELMLSKAIGCKKGDIMFSSNDTPEAEFRYANEIGGIINLDDI---THIEAVE 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ QI + + Sbjct: 129 KAVGYIPKTISCRYNPGGLFKISNDIMDNPGDAKYGMTTDQIFEAFRILKAKGAEEFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A + + + G ++ I++ GG+GI Y + P Sbjct: 189 AFLASNTVTNEYYPMLAKIMFELAVKLQKETGAHVGFINLSGGIGIPYRPEQTPNDIRVI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++ G LVTK I K + K ++ +D Sbjct: 249 GEGVRKVYEEVLVPAGMGDVAIYTELGRFMMGPYGCLVTKAIHEKHT-HKEYIGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H DI G +CE D A++R + GDLL I Sbjct: 308 NLMRPAMYGAYHHITVMGKEDKPCDH-LYDITGSLCENNDKFAIDRYLPEIEMGDLLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE-LDSIP 417 TGA+G YN +L EI++ F +IR T ++ D P Sbjct: 367 DTGAHGFAMGYNYNGKLKSAEILLREDGSFEMIRRAETPRDYFATFDCFP 416 >gi|327462018|gb|EGF08347.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1057] Length = 416 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 94/404 (23%), Positives = 163/404 (40%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L ++ TPF+ Y + + AF +A+KA N A++K L G Sbjct: 11 LAEITAQFPTPFHLYDEKGVRERARALHKAFSWNPGFKEYFAVKATPNPAILKILKEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL + + I+FS ++ A G + + Sbjct: 71 GVDCASYVELLMSQKLGFAGQDIMFSSNNTPAEDFQFARDLGATINLDA----YEDVAFL 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G I+ R NP I +E KFG+ Q+ + L K Sbjct: 127 KEAAGIPKVISCRYNPGGVFELGTSIMDNPEEAKFGMTKDQLIQAFKELKDLGAEKFGIH 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + A +L + + G + I++ GG+GI Y + + Sbjct: 187 ALLASNTVSNDYYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEGNDIAVI 246 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + Q + + Q KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 247 GQGVRQAYEAILTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQT-YRTYLGVDASAV 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y +YH I + + D++G +CE D A+NR + + + GD L I Sbjct: 306 NLLRPAMYGSYHHITNMDR--SESETEIVDVIGNLCENNDKFAINRPLPVSQIGDTLVIH 363 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN++L EI++ +IR ++ Sbjct: 364 DTGAHGFSMGYQYNAKLRSSEILLEQDGNVRMIRRAEKPEDYFA 407 >gi|256823976|ref|YP_003147936.1| diaminopimelate decarboxylase [Kytococcus sedentarius DSM 20547] gi|256687369|gb|ACV05171.1| diaminopimelate decarboxylase [Kytococcus sedentarius DSM 20547] Length = 445 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 93/413 (22%), Positives = 159/413 (38%), Gaps = 26/413 (6%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV-CYALKANSNQAVIKTLAHLGSGL 78 +LA + TPF+ Y AI + F+ AF + +A+KA A+++ L+ G G Sbjct: 33 ELAAELPTPFHLYDEAAIRAHAREFNAAFAWAPGFLNHFAVKATPTPAIVRVLSEEGFGA 92 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S EL + ERI+F+ +E A++ G + Sbjct: 93 DCSSLPELELCDRLGIRGERIMFTSNDTPAEEFARAVELGAVANLDDITHLDTLEAAAGR 152 Query: 139 SLGKKAPIAFRVNPDINAN-THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + A T I + K+G+ Q+ Y A + + Sbjct: 153 LPE-----LLSFRYNPGAERTGNAIIGDPVQAKYGVTSEQLLDAYREARDRGVQRFALHT 207 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 M +++D A + + G ++ +++GGG+GI Y D P + + Sbjct: 208 MVASNELDGAYIVETARMVFELAVRLKDELGITLEFVNLGGGIGIPYGVDDAPMNLQAVS 267 Query: 258 SLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 I + + E GR + G LV++V KT+V LD +M++ Sbjct: 268 DGIRALHEQVLTPSGLEGLGLRFECGRVMTGPYGYLVSRVR-QVTQKYKTYVGLDASMHN 326 Query: 311 FMRPTLYDAYHEIN----------YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 MRP +Y +YH I D+ G +CE D A++R++ + Sbjct: 327 LMRPAMYGSYHHITVLPGPDAASLPDAGDLAPGATSTYDVTGSLCENNDKFAIDRELPVV 386 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 PGD++ + GA+G YN +L E +++ Q H IR T +L Sbjct: 387 HPGDVVVLHDAGAHGHSMGFNYNGKLRSAEYLLDQNGQAHQIRRAETMDDLFA 439 >gi|149012433|ref|ZP_01833464.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP19-BS75] gi|169833320|ref|YP_001695331.1| diaminopimelate decarboxylase [Streptococcus pneumoniae Hungary19A-6] gi|194396976|ref|YP_002038560.1| diaminopimelate decarboxylase [Streptococcus pneumoniae G54] gi|147763489|gb|EDK70425.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP19-BS75] gi|168995822|gb|ACA36434.1| diaminopimelate decarboxylase [Streptococcus pneumoniae Hungary19A-6] gi|194356643|gb|ACF55091.1| diaminopimelate decarboxylase [Streptococcus pneumoniae G54] Length = 416 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 158/410 (38%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREELEAIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERVAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGLHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V K +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKK-ETYRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I+ + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHISNVTH--PDGPAEAVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|333028651|ref|ZP_08456715.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071] gi|332748503|gb|EGJ78944.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071] Length = 412 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 120/413 (29%), Positives = 190/413 (46%), Gaps = 15/413 (3%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 V L A TP Y + + AF V YA KA +A+++ L Sbjct: 1 MGGVPLTSAAERYGTPLYVLDEDQVRARARAYRAAFPDAG--VHYAAKAFLCRALVRWLD 58 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G GLD+ S GEL A+AA PA+R++ G K+ ++ AL+ G+ ++S E+ Sbjct: 59 EEGIGLDVCSAGELELAVAAGFPADRVLLHGNAKSPRDLASALRLGVGRVVLDSVGEITR 118 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL--PG 190 L ++ + RV P I+A H K+ TG ++ KFG+ + + +A A L P Sbjct: 119 LAALVPPGERRRVLV-RVVPGISAGHHDKVRTGDEDQKFGLSLTDGSAQHAVARVLATPC 177 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHR 249 ++++G+ HIGSQI +++ + A + L L ++ + ID+GGG +A R Sbjct: 178 LELTGLHCHIGSQIAEVKPYLAAQRRLLGLRARIAETYGVVLPEIDLGGGHAVAQRPGER 237 Query: 250 PPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 +D A + G + +++LEPGR LVA G+ V +V+++K++A + FV Sbjct: 238 GIDLTDLARRLRAELAESCRAAGLPEPRLLLEPGRALVARAGVAVYRVLAVKRTAHRVFV 297 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPR 361 +D M D RP LY A + + H D+VG CE GD +A + R Sbjct: 298 AVDGGMGDNPRPALYGAPCVPRLVGRVSTAAPH-PVDLVGRHCEAGDVLAPAVPLPADIR 356 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 PGDL+ GAY + YN P I ++ R +L D Sbjct: 357 PGDLVATPVAGAYQLSMASAYNLHGRPPLIATREGTPRLLIRREEPDDLWLRD 409 >gi|329955689|ref|ZP_08296597.1| diaminopimelate decarboxylase [Bacteroides clarus YIT 12056] gi|328526092|gb|EGF53116.1| diaminopimelate decarboxylase [Bacteroides clarus YIT 12056] Length = 386 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 138/370 (37%), Positives = 197/370 (53%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y T + A + V YA+KAN+N V+ + G G D V Sbjct: 11 RELRTPFYYYDTKVLRDTLACIRTEASRYENYSVHYAVKANANPKVLTIIRESGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA++IVF+GVGK EI+L L I+CFNVES EL+ +N+ A + G Sbjct: 71 SGGEIRAAIKAGFPADKIVFAGVGKADWEINLGLDYDIFCFNVESVPELEIINELAAAKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NP++ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KTANVAFRINPNVGAHTHANITTGLAENKFGISMEDMDHVIDVAQEMQNVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---DYAS 258 SQI + F + +L +L + I H++VGGGLGI Y R P + + Sbjct: 191 SQILDMGDFVALCNRVNELLDKLEARRIRIGHVNVGGGLGIDYGHPDRQPVPDFKSYFET 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + E GR +V G L++KV+ +K+ A+K F ILD M D +RP LY Sbjct: 251 YDNCLKLRPYQTLHFELGRSVVGQCGSLISKVLYVKQGANKQFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H I N D D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AFH---KIENVTSDAPQQTYDVVGPICESSDVFGKAVDLNGVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRELP 377 >gi|288926151|ref|ZP_06420078.1| diaminopimelate decarboxylase [Prevotella buccae D17] gi|288337043|gb|EFC75402.1| diaminopimelate decarboxylase [Prevotella buccae D17] Length = 386 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 142/367 (38%), Positives = 196/367 (53%), Gaps = 7/367 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMV-CYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TPFY Y T + + + ++ D V YA+KAN+N V+ + G G D VS GE Sbjct: 16 TPFYYYDTELLRRTLKSINDEAARHDGFVVHYAVKANANPKVLNVICQAGLGADCVSGGE 75 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + AL A PA + VF+GVGK+ EI+LAL I+CFNVES EL+ +N+ A G A Sbjct: 76 IEAALRAGFPAAKTVFAGVGKSDWEINLALDKDIFCFNVESIPELEIINELAARKGTTAR 135 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 +AFR+NP+I A+TH I+TG E+KFGI + + S+ A+TL V G+ HIGSQI Sbjct: 136 VAFRINPNIGAHTHANITTGLAENKFGIALEDMDSVIERAATLEHVAFVGLHFHIGSQIL 195 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F + DL L ++H++VGGGLGI YH +R P A Sbjct: 196 DMGDFKALCNRINDLQAHLEHRHIRLEHLNVGGGLGIDYHHPNRVPVPDFKAYFDTYARH 255 Query: 266 ---NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ E GR +V +G L+T+ + +K+ A K F I+D M D +RP LY AYH Sbjct: 256 LKLREGQRLHFELGRAVVGQMGTLITRTLYVKQGAAKQFAIVDAGMTDLIRPALYQAYH- 314 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I N + D+VGPICE+ D A + GDL+ I GAYG + + Y Sbjct: 315 --KIENLSSQEPPETYDVVGPICESSDVFAKAVDLNKAHRGDLMAIRSAGAYGEIMASGY 372 Query: 383 NSRLLIP 389 N R L Sbjct: 373 NCRQLPA 379 >gi|307705628|ref|ZP_07642479.1| protein tabA [Streptococcus mitis SK597] gi|307620804|gb|EFN99889.1| protein tabA [Streptococcus mitis SK597] Length = 416 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 101/410 (24%), Positives = 161/410 (39%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FINREQLEAIVSEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + P I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V KK+ +T++ Sbjct: 241 NDIALIGEGVRKVYEEVLTPAGLGQVKIYTELGRFMLAPHGALVTRVTHKKKT-YRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I + + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHITNVTH--PDGPAEVVDVVGSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLLIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|322420222|ref|YP_004199445.1| Orn/DAP/Arg decarboxylase 2 [Geobacter sp. M18] gi|320126609|gb|ADW14169.1| Orn/DAP/Arg decarboxylase 2 [Geobacter sp. M18] Length = 422 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 99/420 (23%), Positives = 171/420 (40%), Gaps = 22/420 (5%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYAL 59 MSA + + H + ++ QTPF+ Y I + + AF G +A+ Sbjct: 3 MSA-SFKDRLFH----RIPEIQQHFQTPFHIYDEAGIRETGASLVKAFSGIPGFREFFAV 57 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA N+ ++K + +G G D S EL +A E I+F+ + +E + A + G Sbjct: 58 KALPNREILKLMKEMGFGFDCSSIPELIQARQLGAKPEDIMFTSNNTSEEEFEFAARDGG 117 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N++ S + + + + R T I +E K+G+ Q+ Sbjct: 118 CILNLDDISLIDKVPVFPEMICFRYNPGPRR-------TGNVIIGNPEEAKYGVSHEQVV 170 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y A + M +++D A +L + + +++GGG Sbjct: 171 EAYRQAQARGARRFGLHTMVASNELDYTYIVETARMVLEVAEEVEAALAIKFDFVNIGGG 230 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYF------GNLQCKIILEPGRFLVADVGILVTKVISI 293 GI Y D +P ++ I + F + +E GRF+ G + Sbjct: 231 FGIPYRPDQKPLDLPTMSAEITELFDGFRKRHGHAPAMFMESGRFMTGPHG-ALVATAIN 289 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K + +V LD M+ MRP LY +YH I+ + +R + D+VG +CE D A+ Sbjct: 290 SKDTYRKYVGLDACMSSLMRPALYGSYHHIDVLGKDGHERSEV-YDVVGSLCENNDKFAI 348 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 R++ GDL+ I +GA+G YN RL E+M+ + +IR T ++ Sbjct: 349 QRELPPIEDGDLVVIHDSGAHGHAMGFQYNGRLRPKELMLRADGRVELIRRAETVEDYFA 408 >gi|322835361|ref|YP_004215387.1| Orn/DAP/Arg decarboxylase 2 [Rahnella sp. Y9602] gi|321170562|gb|ADW76260.1| Orn/DAP/Arg decarboxylase 2 [Rahnella sp. Y9602] Length = 435 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 113/413 (27%), Positives = 192/413 (46%), Gaps = 12/413 (2%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 +++ ++LA V TPFY YS + I+ ++ + + Y+LKAN N+ +++ L Sbjct: 16 IDDIPYQRLADRVPTPFYAYSASQIKADFSALKKSLPD-EIHYFYSLKANPNKTLVQLLN 74 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G+G ++ S EL ++ VP E I+F G GK I E+ + GI +ES E+K Sbjct: 75 REGTGCEVCSLAELETVISQGVPPEDIIFVGPGKYIAELTQCCRIGIKAVVIESIEEIKL 134 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 LN A S+G IA R+NP+ K+ K +FGI + +A + ++ Sbjct: 135 LNDIAASMGVIQTIALRINPEF-TGEKAKLVMSGKPRQFGIDEQLLPQAFACVAQQENLR 193 Query: 193 ISGVDMHIGSQIDQIES-FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 ++G+ +++G++I ++ +L + +DVGGG G+ Y +P Sbjct: 194 LAGIHIYLGTRILDWQALAKNTLNILSLAGSLQEIYKVDFDFVDVGGGFGVRYFDKEKPL 253 Query: 252 SSSDYA-----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 + + + +CKII+E GR+L+A GI VT+V +K S D+ F + D Sbjct: 254 DIVALGGALAPVIRNYHDKFPRCKIIVELGRYLIARAGIFVTRVNYLKPSRDEWFAVCDG 313 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALNRKIALPRPG 363 N ++ N+ + G+ + GP+C D + N +A PG Sbjct: 314 GANCHGSAAGINSLIRRNFPMARLGETRAGTQHRYQVTGPLCTPTDILGENIMLAELHPG 373 Query: 364 DLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 DL+ I +GAYGA S + S EI+V Q +IR + + L+ Sbjct: 374 DLIGIGHSGAYGASASPVNFLSFGHPAEILVEKGQAFLIRTADSIETLLAPQI 426 >gi|306834154|ref|ZP_07467274.1| diaminopimelate decarboxylase [Streptococcus bovis ATCC 700338] gi|304423727|gb|EFM26873.1| diaminopimelate decarboxylase [Streptococcus bovis ATCC 700338] Length = 414 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 160/404 (39%), Gaps = 18/404 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+K+ TPF+ Y I + + AF +A+KA A++K L Sbjct: 11 LQKITDAFPTPFHLYDEMGIREKARALNKAFAWNKGFKEYFAVKATPTPAILKILQEEDC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D +E EL + I+FS E A + G + + Sbjct: 71 GVDCATEVELLMSHKLGFT--DIMFSSNDTPAREFRYAKEIGATINLDA----YEHIAFL 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G ++ R NP I +E KFG+ Q+ + Sbjct: 125 KEAAGLPETVSLRYNPGGVFALGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKNFGIH 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G + I++ GG+G+ Y + P + Sbjct: 185 SFLASNTVTNDYYPELARQLFELAVEVKEKTGVAVSFINLSGGVGVNYRPEQEPNDIAVI 244 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ F + KI E GRF++A G+LVTKV K++ +T++ +D + Sbjct: 245 GKGVHRVFDEVLIPAGLGDVKIFTELGRFMLAPHGLLVTKVRHRKQT-YRTYIGVDASAV 303 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +YDAYH I + NP G D+VG +CE D A R++ R GD L + Sbjct: 304 NLMRPAMYDAYHHITNVSNPNGK--LEVVDVVGSLCENNDKFAKQRELPEARVGDTLVVH 361 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL EI+ +IR T ++ Sbjct: 362 DTGAHGFSMGYQYNGRLRSAEILYQEDGGARLIRRAETPEDYFA 405 >gi|300727749|ref|ZP_07061135.1| diaminopimelate decarboxylase [Prevotella bryantii B14] gi|299775037|gb|EFI71643.1| diaminopimelate decarboxylase [Prevotella bryantii B14] Length = 385 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 138/374 (36%), Positives = 201/374 (53%), Gaps = 10/374 (2%) Query: 22 AHVVQ---TPFYCYSTTAIEKNYLTFSNAFDGMDTM-VCYALKANSNQAVIKTLAHLGSG 77 + TPFY Y T + + D + V YA+KAN+N V+ + G G Sbjct: 7 VEKFKNIRTPFYYYDTNILRDTLKAIKSETDKHEHFMVHYAIKANANPKVLNIICQAGLG 66 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ RAL PA +IVF+GVGK+ EI+LA+ I+CFNVES EL+ +NQ A Sbjct: 67 VDCVSGGEIERALEVGFPANKIVFAGVGKSDWEIELAIDKDIFCFNVESIPELEVINQIA 126 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 GK A +AFR+NP++ A+TH I+TG E+KFGI + + ++ A + VK G+ Sbjct: 127 QEKGKIAHVAFRINPNVGAHTHANITTGLAENKFGIAMCDMLTVIEEAKNMKNVKFVGLH 186 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--- 254 HIGSQI + F + +L L N ++HI+VGGGLGI Y ++ P Sbjct: 187 FHIGSQILDMGDFEALCNRINELQDTLERNNIKVEHINVGGGLGIDYEHPNQSPIPDFKS 246 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + ++ E GR +V +G L+TK + +K+ + K F I+D M D +RP Sbjct: 247 YFETYSKFLKLRNGQQVHFELGRAVVGQMGTLITKTLYVKQGSAKKFAIVDAGMTDLIRP 306 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 LY AYH I N + + D+VGPICE+ D A + + + GDL+ I GAY Sbjct: 307 ALYQAYH---KIENISSNAPTEAYDVVGPICESSDVFAKSIDLNKCQRGDLIAIRSAGAY 363 Query: 375 GAVQSGTYNSRLLI 388 G + + YN R + Sbjct: 364 GEIMASQYNCRKMP 377 >gi|34541757|ref|NP_906236.1| diaminopimelate decarboxylase [Porphyromonas gingivalis W83] gi|34398075|gb|AAQ67135.1| diaminopimelate decarboxylase [Porphyromonas gingivalis W83] Length = 382 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 133/372 (35%), Positives = 194/372 (52%), Gaps = 10/372 (2%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPFY Y T +E+ + + D + YALKAN++ +++T+A G G D VS GE+ Sbjct: 3 TPFYFYDLTLLERTLSALARSAGRHDVAIHYALKANNHPRILQTVAAAGFGADCVSGGEI 62 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A+ A PA I F+GVGK+ +EI L+L++ I F VES EL + + A S API Sbjct: 63 EAAIEAGFPASDIFFAGVGKSDEEILLSLEARIGAFVVESVPELLNIERLAGSKNDIAPI 122 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP+++A+TH I+TG E+KFG+ +L + + G+ HIGSQI Sbjct: 123 LLRLNPEVDAHTHSHITTGLAENKFGLLPEDALALMPHLLQSGSLVWRGLHFHIGSQIRS 182 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD--HRPPSSSDYASLIHQYF 264 + F K + + R+ G++ ID+GGGLGI Y P + Y + Sbjct: 183 AKVFEKLCEKTNRILASFRTAGYSPDIIDMGGGLGINYDEPEAEPIPDFATYIERYRRMI 242 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH--- 321 + ++ +EPGR +VA G L+T+V+ IK+ K F I+D M D +RP LY+A+H Sbjct: 243 ETGEARLHIEPGRSVVAQCGSLITQVLYIKEGKAKKFAIVDAGMTDLVRPALYEAHHQIR 302 Query: 322 -----EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 E L D+VGPICE+ D + + GD L I GAYGA Sbjct: 303 LVQPGEWTMRATSPSAALTEKYDVVGPICESSDVFERELLMPELKRGDYLAIRSAGAYGA 362 Query: 377 VQSGTYNSRLLI 388 V + +YN R L Sbjct: 363 VMASSYNMRPLP 374 >gi|317049365|ref|YP_004117013.1| diaminopimelate decarboxylase [Pantoea sp. At-9b] gi|316950982|gb|ADU70457.1| diaminopimelate decarboxylase [Pantoea sp. At-9b] Length = 417 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 110/410 (26%), Positives = 173/410 (42%), Gaps = 29/410 (7%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA PF+ Y + I++ + FD +V +A KA SN +++ + G +D Sbjct: 20 LAQRYSGPFWAYDASVIQQRIAQLNQ-FD----VVRFAQKACSNIHILRLMRAAGVKVDS 74 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RALAA + T D +D + I V + + + ++ Sbjct: 75 VSLGEIERALAAGYQPGGE---DIVFTADVLDQPTLARIAQLKVPVNAGSVDMLHQLGAV 131 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + R+NP +K +TG + K GI + A + + Sbjct: 132 SAGHAVWLRINPGFGHGHSQKTNTGGENSKHGIWHSDLPQALAAIQQHGLRLV-----GL 186 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH------SDHRPPSSS 254 I + ++ + Q+ S G +++ I GGGL I Y Sbjct: 187 HMHIGSGVDYGHLQQVCDAMVDQVVSFGQDLEAISAGGGLSIPYRVGEEAIDTDHYYGLW 246 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + A K+ +EPGRFLVA+ G+LV++V ++K+ + FV++D +D MRP Sbjct: 247 NGARERIAAHLGHAVKLEIEPGRFLVAESGVLVSQVRAVKEMGSRHFVLVDAGFSDLMRP 306 Query: 315 TLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIA-------LNRKIALPRPGD 364 +Y +YH I + + I GP+CE+GD R + + GD Sbjct: 307 AMYGSYHHISLLPADGRTVNASQTVESVIAGPLCESGDVFTQLEGGKVETRALPAAQVGD 366 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 L TGAYGA S YNSR LIPE++ IR T QEL+ L+ Sbjct: 367 YLVFHDTGAYGASMSSNYNSRPLIPEVLFENGTAREIRRAQTIQELLALE 416 >gi|218508585|ref|ZP_03506463.1| diaminopimelate decarboxylase protein [Rhizobium etli Brasil 5] Length = 350 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 205/343 (59%), Positives = 269/343 (78%), Gaps = 1/343 (0%) Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 SNQAV+KTL LG+G+D+VSEGELRRALAA + A RI+FSGVGKT E+D AL++GIYCF Sbjct: 8 SNQAVLKTLGRLGAGIDVVSEGELRRALAADISASRIMFSGVGKTPSEMDFALEAGIYCF 67 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVESE EL+ LNQRAVS GKKAP++FR+NPD++A TH KISTGKKE+KFGI + ++Y Sbjct: 68 NVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIY 127 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG- 241 A+A+ LPG+ ++G+DMHIGSQI +++ F AFKLLRDL LR++GH I H+D+GGGLG Sbjct: 128 AHAAKLPGIDVTGIDMHIGSQITELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGLGV 187 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 ++ PP YA+++ +L CK+I EPGR +V + GILVT+V+ +K +KTF Sbjct: 188 PYKDDNNPPPLPDAYAAIVKNQLRDLNCKVITEPGRLIVGNAGILVTEVLYVKDGGEKTF 247 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 VI+D AMND +RPTLY+AYHEI + A + I AD+VGP+CETGD++AL+R++A+P+ Sbjct: 248 VIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAMPK 307 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPR 404 PGDLL + GAYGAVQ+GTYNSRLL+PE++V G FH IRPR Sbjct: 308 PGDLLAVSTAGAYGAVQAGTYNSRLLVPEVLVKGGDFHAIRPR 350 >gi|312171258|emb|CBX79517.1| Diaminopimelate decarboxylase [Erwinia amylovora ATCC BAA-2158] Length = 417 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 106/411 (25%), Positives = 170/411 (41%), Gaps = 31/411 (7%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA PF+ Y + I + FD +V +A KA SN +++ + G +D Sbjct: 20 LARQYGGPFWAYDASIIGERISQLQQ-FD----VVRFAQKACSNIHILRLMRAAGVKVDS 74 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RALAA + T D +D + + + + + + + Sbjct: 75 VSLGEIERALAA---GYLTGGDEIVFTADLLDKPTLARVAELKIPVNAGSVDMLHQLGQV 131 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD-MH 199 P+ RVNP +K + G A L ++ + + Sbjct: 132 SAGHPVWLRVNPGFGHGHS------QKTNTGGENSKHGIWYGDMALALEAIETYQLQLVG 185 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 I I + ++ + + S G ++Q I GGGL + Y + Y L Sbjct: 186 IHMHIGSGVDYAHLEQVCDAMVNHVISFGQDLQAISAGGGLSVPYRFGEETIDTQHYFGL 245 Query: 260 IHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 K+ +EPGRFLVA+ G+L+++V ++K + FV+ D ND MR Sbjct: 246 WDAARQRVERHLGHPVKLEIEPGRFLVAESGVLISQVRAVKNMGSRHFVLADAGFNDLMR 305 Query: 314 PTLYDAYHEINYIV---NPAGDRLHIHADIVGPICETGDFIA-------LNRKIALPRPG 363 P++Y +YH I+ I + + + + GP+CE+GD R + + G Sbjct: 306 PSMYGSYHHISAIAGDGRALDEVNTVESVVAGPLCESGDVFTQLEGGKVETRALPAVQVG 365 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 D L TGAYGA S YNSR L+ E++ Q IR T EL+ L+ Sbjct: 366 DYLVFHDTGAYGASMSSNYNSRPLLAEVLFENGQPRQIRRAQTVAELLALE 416 >gi|13541637|ref|NP_111325.1| diaminopimelate decarboxylase [Thermoplasma volcanium GSS1] gi|14325036|dbj|BAB59962.1| diaminopimelate decarboxylase [Thermoplasma volcanium GSS1] Length = 409 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 107/412 (25%), Positives = 172/412 (41%), Gaps = 18/412 (4%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + F + + E S++ + TP YS I KN + A + T Y++KA Sbjct: 5 NPFVWNGDDMLVEGYSVKAIVETFGTPVIIYSAPRIVKNVSSLFGAMPKV-TKCFYSVKA 63 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NSN +++ + G G ++ S GE++ A+ + + + I+F+ + +E+D AL GI Sbjct: 64 NSNPNLVRLIGRQGCGSEVTSLGEIQIAMISSIDPDDILFTPNNVSKEEMDFALDRGIKI 123 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 + Q + + FR+NP I H +TG KFGI L Sbjct: 124 T-------FNSPGQFELVSNRVEEATFRINPGIGHGEHPGTTTGGHGSKFGIDPETALKL 176 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A L K M + D K ++ ++ +ID+GGG G Sbjct: 177 YTRAKELGIRKFGIHMMVGSNNTDADLMLTFYKKFFDMASEIEKTAHLQFSYIDIGGGFG 236 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL-EPGRFLVADVGILVTKVISIKKSADKT 300 + Y+ + R S + + + + EPGR++VAD GILV KV + Sbjct: 237 VPYNDEQRSLDIKKLGSGLKELVDQYGIERLFIEPGRYIVADAGILVGKVYDVYNG---- 292 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV D+ MN +R LY A H + + + + G ICE D R Sbjct: 293 FVGTDIGMNINIRHALYGAEHRFYALTGRSDEAE---YIVTGQICENTDV--TGRLTGKV 347 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 + GDL+ + GAY S YN R E++V+ + IR R T +++ Sbjct: 348 QIGDLVAMYDAGAYIYSMSSNYNGRFRPTEVIVDHDGVYRIRRRETVNDILA 399 >gi|282877924|ref|ZP_06286733.1| diaminopimelate decarboxylase [Prevotella buccalis ATCC 35310] gi|281299925|gb|EFA92285.1| diaminopimelate decarboxylase [Prevotella buccalis ATCC 35310] Length = 385 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 136/384 (35%), Positives = 199/384 (51%), Gaps = 8/384 (2%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHL 74 VSL+KL+ QTPFY Y T +++ + V YA+KAN+N ++ ++ Sbjct: 5 VSLDKLSTK-QTPFYYYDTALLKETLQAIKTEIEQYERFQVHYAVKANANAKLLNIISQA 63 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G D VS GE+ A+ A +IV++GVGK+ EI L + I CFNVES +EL+ +N Sbjct: 64 GLEADCVSGGEILAAIDAGFSPNKIVYAGVGKSDWEIALGIDQEILCFNVESIAELEVIN 123 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + A GK A IA R+NPD+ A+TH I+TG E+KFGI + ++ + + V+ + Sbjct: 124 EIAEKKGKIARIALRINPDVEAHTHANITTGLAENKFGIALCEMKTALEACLRMKNVRFT 183 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+ HIGSQI + F + L ++L + +++ I+VGGGLG+ Y + P Sbjct: 184 GLHFHIGSQILDMRDFVSLCDRINQLQEELHQHHVHVESINVGGGLGVNYEHPDQQPIPD 243 Query: 255 DYASLIHQYFG---NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 A + E GR +VA G L+TKV+ +K+ K F I+D M DF Sbjct: 244 FKAYFQTYAQHLKLYPHQTLHFELGRSIVAQCGSLITKVLYVKQGVRKKFCIVDAGMTDF 303 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 +RP LY + H I N + + H D+VGPICE+ D A + DLL I Sbjct: 304 IRPALYQSRH---QIENLSSNDAHETYDVVGPICESSDVFAKAIDLNQCHRCDLLAIRSA 360 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNG 395 GAYG V + YN R L + Sbjct: 361 GAYGEVMASQYNCRKLPKGYLTED 384 >gi|283479623|emb|CAY75539.1| lysA [Erwinia pyrifoliae DSM 12163] Length = 445 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 119/416 (28%), Positives = 186/416 (44%), Gaps = 29/416 (6%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 +L LA P + Y + I + FD +V +A KA SN +++ + Sbjct: 42 GENLLPLARRYAGPLWAYDASIISERISQLQQ-FD----VVRFAQKACSNVHILRLMRAA 96 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G +D VS GE+ RALAA A T D +D A + + V + + Sbjct: 97 GVKVDSVSLGEIERALAAGYQAGGDEI---VFTADLLDEATLARVAELKVPVNAGSVDML 153 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + P+ RVNP +K +TG + K GI + A +K+ Sbjct: 154 HQLGQVSAGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDMALALE-AMQKYQLKLV 212 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+ MHIGS + + ++ + Q+ + G ++Q I GGGL + YH + Sbjct: 213 GIHMHIGSGV----DYAHLEQVCDAMVNQVVNFGQDLQAISAGGGLSVPYHFGEETIDTR 268 Query: 255 DYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 Y L K+ +EPGR+LVA+ G+LV++V ++K + FV++D Sbjct: 269 HYFGLWDAARQRVERHLGHPVKLEIEPGRYLVAESGVLVSQVRAVKNMGSRHFVLVDAGF 328 Query: 309 NDFMRPTLYDAYHEINYIV---NPAGDRLHIHADIVGPICETGDFIA-------LNRKIA 358 ND MRP++Y +YH I+ I + + + + GP+CE+GD R + Sbjct: 329 NDLMRPSMYGSYHHISAIAGDGRALDEMNSVESVVAGPLCESGDVFTQLEGGKVETRALP 388 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + GD L TGAYGA S YNSR L+PE++ Q IR T EL+ L+ Sbjct: 389 AVQVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGQPRQIRRAQTVAELLALE 444 >gi|167751738|ref|ZP_02423865.1| hypothetical protein EUBSIR_02747 [Eubacterium siraeum DSM 15702] gi|167655546|gb|EDR99675.1| hypothetical protein EUBSIR_02747 [Eubacterium siraeum DSM 15702] Length = 423 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 93/406 (22%), Positives = 147/406 (36%), Gaps = 17/406 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++ + TPF+ Y I + +AF +A+KA N +++ L G Sbjct: 12 LEEIIKEIPTPFHIYDEKGIRETARKLYDAFSWNKGFREYFAVKATPNPYLMEILKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+FS ++ LA + G + Sbjct: 72 GFDCSSYTELMLSDKVGAKQHDIMFSSNATPDEDFKLAYKLGAIINLDDFTHIDVL---- 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHK--KISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 G I R NP T + + K+ K+G+ QI Y Sbjct: 128 DKLTGIPETICCRYNPGGEFKTSEKGNVMDTPKDAKYGMTHEQIIEAYKILKEKGAKHFG 187 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + A L R + G + I++ GG+G+ Y D Sbjct: 188 MHAFLASNTLTNEYYPVLAGILFRTAVEIKEKTGVQLSFINLSGGVGVPYKPDQPANDIK 247 Query: 255 DYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + + + I E GR+++A G LV K I K + + A Sbjct: 248 VIGEGVRKAYEEILVPAGMGDVAIFTELGRYMLAPNGALVAKAIREKHIYKEYIGLDACA 307 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 N RP +Y AYH I + H DI G +CE D A++R + GD++Y Sbjct: 308 ANLM-RPAIYGAYHHITVMGKENQPCDH-KYDITGGLCENCDKFAVDRMLPKIDIGDIIY 365 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 I TGA+G YN +L E+++ F +IR T ++ Sbjct: 366 IHDTGAHGFSMGYNYNGKLRSAEVLLKEDGSFKLIRRAETPKDYFA 411 >gi|160891934|ref|ZP_02072937.1| hypothetical protein BACUNI_04392 [Bacteroides uniformis ATCC 8492] gi|270296403|ref|ZP_06202603.1| diaminopimelate decarboxylase [Bacteroides sp. D20] gi|317480402|ref|ZP_07939501.1| diaminopimelate decarboxylase [Bacteroides sp. 4_1_36] gi|156858412|gb|EDO51843.1| hypothetical protein BACUNI_04392 [Bacteroides uniformis ATCC 8492] gi|270273807|gb|EFA19669.1| diaminopimelate decarboxylase [Bacteroides sp. D20] gi|316903435|gb|EFV25290.1| diaminopimelate decarboxylase [Bacteroides sp. 4_1_36] Length = 386 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 133/370 (35%), Positives = 195/370 (52%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y T + A + V YA+KAN+N V+ + G G D V Sbjct: 11 RELRTPFYYYDTKVLRDTLSCIRTEAARYGNYSVHYAVKANANPKVLAIIRENGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A P +IVF+GVGK EI+L L I+CFNVES EL+ +N+ A + G Sbjct: 71 SGGEIRAAIKAGFPTGKIVFAGVGKADWEINLGLDYDIFCFNVESVPELEIINELAAAKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NP++ A+TH I+TG E+KFGI + + + A + ++ G+ HIG Sbjct: 131 KVANVAFRINPNVGAHTHANITTGLAENKFGISMQDMDHVIDIAQNMKNLRFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---DYAS 258 SQI + F + +L +L + I+H++VGGGLGI Y +R P + + Sbjct: 191 SQILDMGDFVALCNRVNELQDKLEARHIRIEHVNVGGGLGIDYGHPNRQPIPDFKSYFET 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + E GR +V G L+++V+ +K+ +K F ILD M D +RP LY Sbjct: 251 YNSHLKLRPHQTLHFELGRAVVGQCGSLISQVLYVKQGTNKQFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H I N D D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AFH---KIENITSDAPVQAYDVVGPICESSDVFGKAIDLNGVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRELP 377 >gi|292487152|ref|YP_003530022.1| diaminopimelate decarboxylase [Erwinia amylovora CFBP1430] gi|292900469|ref|YP_003539838.1| diaminopimelate decarboxylase [Erwinia amylovora ATCC 49946] gi|291200317|emb|CBJ47445.1| diaminopimelate decarboxylase [Erwinia amylovora ATCC 49946] gi|291552569|emb|CBA19614.1| Diaminopimelate decarboxylase [Erwinia amylovora CFBP1430] Length = 417 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 106/411 (25%), Positives = 170/411 (41%), Gaps = 31/411 (7%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA PF+ Y + I + FD +V +A KA SN +++ + G +D Sbjct: 20 LARQYGGPFWAYDASIIGERISQLQQ-FD----VVRFAQKACSNIHILRLMRAAGVKVDS 74 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RALAA + T D +D + + + + + + + Sbjct: 75 VSLGEIERALAA---GYLTGGDEIVFTADLLDKPTLARVAELKIPVNAGSVDMLHQLGQV 131 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD-MH 199 P+ RVNP +K + G A L ++ + + Sbjct: 132 SAGHPVWLRVNPGFGHGHS------QKTNTGGENSKHGIWYGDMALALEAIETYQLQLVG 185 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 I I + ++ + + S G ++Q I GGGL + Y + Y L Sbjct: 186 IHMHIGSGVDYAHLEQVCDAMVNHIISFGQDLQAISAGGGLSVPYRFGEETIDTQHYFGL 245 Query: 260 IHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 K+ +EPGRFLVA+ G+L+++V ++K + FV+ D ND MR Sbjct: 246 WDAARQRVERHLGHPVKLEIEPGRFLVAESGVLISQVRAVKNMGSRHFVLADAGFNDLMR 305 Query: 314 PTLYDAYHEINYIV---NPAGDRLHIHADIVGPICETGDFIA-------LNRKIALPRPG 363 P++Y +YH I+ I + + + + GP+CE+GD R + + G Sbjct: 306 PSMYGSYHHISAIAGDGRALDEVNTVESVVAGPLCESGDVFTQLEGGKVETRALPTVQVG 365 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 D L TGAYGA S YNSR L+ E++ Q IR T EL+ L+ Sbjct: 366 DYLVFHDTGAYGASMSSNYNSRPLLAEVLFENGQPRQIRRAQTVAELLALE 416 >gi|95929053|ref|ZP_01311798.1| Orn/DAP/Arg decarboxylase 2 [Desulfuromonas acetoxidans DSM 684] gi|95134954|gb|EAT16608.1| Orn/DAP/Arg decarboxylase 2 [Desulfuromonas acetoxidans DSM 684] Length = 421 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 98/406 (24%), Positives = 163/406 (40%), Gaps = 17/406 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLG 75 +L ++A TPF+ Y I + F G+D +A+KA N+ ++K + + Sbjct: 14 ALPEIAEHYGTPFHIYDEAGIRETGEHLKQVFSGIDGFREYFAVKALPNKQILKLMKEMN 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G D S EL + E I+F+ + +E A Q G N++ S + + Sbjct: 74 FGYDCSSIPELIMSRELGADTEDIMFTSNNTSPEEFAFAEQDGGCILNLDDISLIDKVPN 133 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + R T I E K+GI Q+ Y A + Sbjct: 134 FPELICFRYNPGPRR-------TGNIIIGNPVEAKYGITHEQVVDAYRKAKERGATRFGL 186 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 M +++D A +L + +++GGG GI Y+ D P Sbjct: 187 HTMVASNELDYTYMVETARMVLSLAELVKAELDIEFEFVNIGGGFGIPYNPDQAPLDIDT 246 Query: 256 YASLIHQYF------GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 A + + F ++ +E GRF+ G LVT+ I K + ++ +D M+ Sbjct: 247 MAKEVTELFDAFKTKNGFVPRMYMESGRFMTGPHGCLVTRAI-NHKDTYRNYIGVDSCMS 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 MRP LY+AYH I+ + + + D+VG +CE D A+ R++ GDLL I Sbjct: 306 ALMRPALYEAYHHIDVVGKDNAPKE-MTYDVVGSLCENNDKFAVQRELPKIDEGDLLVIH 364 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELD 414 +GA+G YN RL E+++ +IR T + Sbjct: 365 DSGAHGHAMGFQYNGRLRPQELLLRCDGSVELIRRAETVDDYFATQ 410 >gi|332878366|ref|ZP_08446090.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683691|gb|EGJ56564.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 386 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 135/366 (36%), Positives = 200/366 (54%), Gaps = 7/366 (1%) Query: 27 TPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TPFY Y T + K T + V YA+KAN+N+ +++ ++ G G D VS GE Sbjct: 15 TPFYYYDTELLRKTLDTIKAETGKNDNYHVHYAVKANANRKLLRIISAAGFGADCVSGGE 74 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++ L A PAE+IVF+GVGK+ EI++ L +GI FNVES EL+ +NQ A K A Sbjct: 75 IKACLDAGFPAEKIVFAGVGKSDWEINVGLDAGIAYFNVESIPELEVINQLAGEKDKIAR 134 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 ++FR+NPD+ A+TH I+TG E+KFGI + + + A++L V+ G+ HIGSQI Sbjct: 135 VSFRINPDVGAHTHANITTGLAENKFGIAMADMEKVIEIAASLKHVEFVGLHFHIGSQIL 194 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---DYASLIHQ 262 ++ F + +L QL + +++I+VGGGLGI Y + P + + Sbjct: 195 EMGDFVALCNRVNELQAQLERHHITVKNINVGGGLGIDYQHPNEVPVPHFADYFQTYRKH 254 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ E GR +V G L+T+V+ +K++ K F I+D M D +RP LY A+H Sbjct: 255 LNLRPDQQLHFELGRAVVGQCGSLITRVLYVKQATYKQFAIVDAGMTDLIRPALYQAFH- 313 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I N + D D+VGPICE+ D + GDLL + GAYG + + Y Sbjct: 314 --SIENLSSDERKETYDVVGPICESSDVFVKAFDLNRCHRGDLLALRSAGAYGEIMASRY 371 Query: 383 NSRLLI 388 N R L Sbjct: 372 NCRELP 377 >gi|330996966|ref|ZP_08320831.1| diaminopimelate decarboxylase [Paraprevotella xylaniphila YIT 11841] gi|329572040|gb|EGG53711.1| diaminopimelate decarboxylase [Paraprevotella xylaniphila YIT 11841] Length = 386 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 133/367 (36%), Positives = 199/367 (54%), Gaps = 7/367 (1%) Query: 27 TPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TPFY Y T + K T + V YA+KAN+N+ +++ + G G D VS GE Sbjct: 15 TPFYYYDTELLRKTLDTIKSETGKNDNYHVHYAVKANANRKLLRIICAAGFGADCVSGGE 74 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++ L A PA++IVF+GVGK+ EI++ L +GI FNVES EL+ +NQ A K A Sbjct: 75 IKACLDAGFPADKIVFAGVGKSDWEINVGLDAGIAYFNVESLPELEVINQLAGEKDKIAR 134 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 ++FR+NPD+ A+TH I+TG E+KFGI + + + A++L V+ G+ HIGSQI Sbjct: 135 VSFRINPDVGAHTHANITTGLAENKFGIAMADMEKVIEIAASLKHVEFVGLHFHIGSQIL 194 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---DYASLIHQ 262 ++ F + +L +L + +++I+VGGGLGI Y + P + + Sbjct: 195 EMGDFVALCNRVNELQDRLERHHITVKNINVGGGLGIDYQHPNEVPVPHFADYFQTYRKH 254 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ E GR +V G L+T+V+ +K++ K F I+D M D +RP LY A+H Sbjct: 255 LHLRPDQQLHFELGRAVVGQCGSLITRVLYVKQATYKQFAIVDAGMTDLIRPALYQAFH- 313 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I N + D D+VGPICE+ D + GDLL + GAYG + + Y Sbjct: 314 --SIENLSSDERKETYDVVGPICESSDVFVKAFDLNRCHRGDLLALRSAGAYGEIMASRY 371 Query: 383 NSRLLIP 389 N R L Sbjct: 372 NCRELPA 378 >gi|281357096|ref|ZP_06243586.1| diaminopimelate decarboxylase [Victivallis vadensis ATCC BAA-548] gi|281316654|gb|EFB00678.1| diaminopimelate decarboxylase [Victivallis vadensis ATCC BAA-548] Length = 406 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 110/405 (27%), Positives = 173/405 (42%), Gaps = 16/405 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 + SL + A TP Y Y + + Y + YALKAN N ++ L Sbjct: 1 MISDESLLEFAKEYGTPLYVYDGDLVVERYRDLFKFIPYDRLKIHYALKANYNPGLLTLL 60 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G+GLD VS GE+ AL P ERI+++ T E + L + K Sbjct: 61 RDAGAGLDTVSPGEVVYALKLGFPRERIIYTANNMTDAEFEQVLAMDVVMNIGSLSRLRK 120 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 Q + R NPD+ ++K TG KFGI + + + A Sbjct: 121 IAKQHPG-----MKLCLRFNPDVCDGDNEKTMTGGDLTKFGILLESVEEVKALV---KEG 172 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + +H + + + + N N++ +D GGG + Y + R Sbjct: 173 NLRVIGLHEHTGSGLQHAESVYQSMDNLMAIATPENFPNLEFLDFGGGFKVPYKPEERRV 232 Query: 252 SSSDYASLIHQYF------GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + I + F + ++ EPG+++VA+ G L+T+V +IK + + D Sbjct: 233 DYVAMGAEIARRFTAFTERYGRRLDMLFEPGKYMVAEAGHLLTEVNTIKCNRTRVIAGCD 292 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 +RP LY AYH+I + NPAG + D+ G ICETGD A R++ R D+ Sbjct: 293 SGFPQLIRPVLYGAYHQIRNLSNPAGKP--VVYDVCGNICETGDRFAEQRELPEIREYDI 350 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 L + GAY G YN R + EI+V+G + R ++T +EL Sbjct: 351 LAVGNAGAYCYSMGGVYNLRPMPGEIVVSGGKVVSERRKLTTEEL 395 >gi|218531665|ref|YP_002422481.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium chloromethanicum CM4] gi|218523968|gb|ACK84553.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium chloromethanicum CM4] Length = 428 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 95/416 (22%), Positives = 168/416 (40%), Gaps = 17/416 (4%) Query: 3 AFKYFE--GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 F + G L + L +LA TP + Y + + Y A V +++K Sbjct: 15 HFS-RDASGVLRVGGLPLTELARDFGTPLFVYDADTMRRIYRALCAALADF-AEVDFSVK 72 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN N AVI+ + G+G +I S E A+ A VP ++I+F+G GK ++D + GI Sbjct: 73 ANPNPAVIRVFSQEGAGAEIASGAEFDAAIRAGVPPDKILFAGPGKGAADLDRVIGDGIG 132 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 ++E+ E+ + A G + +A R+NP A GK FG I + Sbjct: 133 EIHLENREEIVRVAAAAERHGVRVRVALRINPGATAQGGAMRMGGKPS-PFGFDEEDIEA 191 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 P +++ G+ + G+Q + ++ ++ L ++ + GG Sbjct: 192 AIDTVEAAPRLRLVGLHLFAGTQGLKADTLLGQWRYGLGLAARIANRTGRPLETIDLGGG 251 Query: 241 GIAYHSDHRPPSS--------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 + D + + +++LEPGR+L G+ V +V++ Sbjct: 252 LGIPYFSGDTALDLGAIRAGLPDLIATLRADPLMASARVVLEPGRYLTGPAGVYVARVLA 311 Query: 293 IKKSADKTFVILDVAMNDFMR---PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 +K+S FVI D M+ + + +VGP+C D Sbjct: 312 LKESRGSRFVITDGGMHHHLAASGNLGQIVKRDFPLAAVTDLGGERAATAVVGPLCTPLD 371 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQFHIIRPR 404 +A + GDL+ + ++GAYG S + S E++V+G + IR R Sbjct: 372 MLARAAPLPPLAEGDLVAVLQSGAYGLTASPMGFLSHPTPAEVLVDGGEAREIRAR 427 >gi|294793828|ref|ZP_06758965.1| protein TabA [Veillonella sp. 3_1_44] gi|294455398|gb|EFG23770.1| protein TabA [Veillonella sp. 3_1_44] Length = 418 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 94/403 (23%), Positives = 150/403 (37%), Gaps = 14/403 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE + TPF+ Y I +N +F NAF +A+KA N +++ L LG Sbjct: 13 LENIIAQYPTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRLLQKLGV 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+F+ E AL+ G + Sbjct: 73 GADCSSLAELLLCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNH 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 R NP I +E K+G+ QI Y Sbjct: 133 GSLPDTFC---VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIH 189 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + +++D A + G ++ ID+GGG+G+AY + P Sbjct: 190 TMVVSNELDIDGLVGTAELCFNLAVDIKKELGITVEFIDLGGGVGVAYKPEQTPVDFRVL 249 Query: 257 ASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + + E GR + G LV+ I K + ++ LD M Sbjct: 250 SKGVEEAYNRILVANGLNDVALAYECGRMVTGPFGYLVSTAIHKKDI-YRHYIGLDACMA 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP LY +YH I + + H+ D+ G +CE D A+ R++ GD + I Sbjct: 309 NLMRPALYGSYHHITVMGKENDPKDHV-YDVTGSLCENNDKFAIQRELPKIDIGDRVIIH 367 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELI 411 GA+G YN +L E+++ IR T+ +L Sbjct: 368 DAGAHGHSMGFNYNGKLRSAELLLHKDGSVTQIRRAETYDDLF 410 >gi|154482513|ref|ZP_02024961.1| hypothetical protein EUBVEN_00180 [Eubacterium ventriosum ATCC 27560] gi|149736643|gb|EDM52529.1| hypothetical protein EUBVEN_00180 [Eubacterium ventriosum ATCC 27560] Length = 418 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 150/404 (37%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y +N + AF +A+KA N +IK L G Sbjct: 12 LKEIEKTYPTPFHIYDEKGFMENARKVNEAFSWNKGFREYFAVKAEPNPFIIKKLKEAGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL A + I+FS E G + + Sbjct: 72 GVDCSSYTELMIADKLGFRNDEIMFSSNETPAGEFKYCNDLGGIINLDDITMIDYMEAEC 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + ++ R NP I + K+G+ QI + Sbjct: 132 GIPET----VSCRYNPGGVFEVCNGIMDNPGDAKYGMTPEQIVEAFKILKAKGVKNFGIH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A + + + G +I+ I++ GG+GI Y D P Sbjct: 188 AFLASNTVTNEYYPMLARTIFELAVKLEKETGADIKFINLSGGVGIPYRPDQEPNDIMAI 247 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++ G LVTK + K K ++ +D Sbjct: 248 GEGVRKVYEEILKPEGMDDIAIYTEMGRFMMGPYGALVTKAVHEKHI-YKEYIGVDACAV 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + + H+ D+VG +CE D A++R++ GD +YI Sbjct: 307 NLMRPAMYGAYHHITVMGKEDQPKDHV-YDVVGSLCENNDKFAVDRELPKIDMGDFIYIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN RL E+++ +IR T + Sbjct: 366 DTGAHGFSMGYNYNGRLRSAELLLKEDGSVEMIRRAETPADYFA 409 >gi|134301797|ref|YP_001121765.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis WY96-3418] gi|134049574|gb|ABO46645.1| Diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis WY96-3418] Length = 394 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 138/399 (34%), Positives = 205/399 (51%), Gaps = 11/399 (2%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYA 58 M+ + F+ + E + L TP Y Y +E +L + D + + YA Sbjct: 1 MNKYIIFDNTKLLEYIGKNSLI----TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYA 56 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN N ++ G G+D VS GE++RAL V ++ IVF+GVGK EI+LA+ + Sbjct: 57 IKANHNPKIVGIAKKYGMGIDCVSGGEIKRALEQKVDSQHIVFAGVGKADWEIELAIDND 116 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ FN ES E++ +NQ A K+ I RVNP+I+A TH ISTG+ +DKFGI I Sbjct: 117 IFAFNSESLEEIQVINQIAQRKNKQVNICLRVNPNIDAQTHHYISTGQFDDKFGIAFVNI 176 Query: 179 HSLYAYAS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + I G+ H+GSQI + F + + LR N NI+HI+ G Sbjct: 177 LNWLKDEYRNFANINIIGLHYHVGSQILNYQVFQSLAITTNEHIKLLRQNDINIKHINFG 236 Query: 238 GGLGIAYHSDHRPP---SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GGLGI Y + + P +A + + + E GR LV G+LV++V+ K Sbjct: 237 GGLGIDYQNPQQNPIVDFDGYFARFREFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNK 296 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + FVI+D M + +RP LY A H+I +++ ++ H IVGPICE+ D A Sbjct: 297 VTQGTHFVIIDAGMTELIRPALYQAQHKIAALIDENINQ-KQHYHIVGPICESSDVFAKY 355 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 ++ + GDLL I GAYG V + YN R + E + Sbjct: 356 YQLPKLKRGDLLAIYSAGAYGKVLASEYNLRPSVQEYFI 394 >gi|167462581|ref|ZP_02327670.1| diaminopimelate decarboxylase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 390 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 122/381 (32%), Positives = 183/381 (48%), Gaps = 14/381 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSN 64 +G L V +L TP Y T + + F +AF G+ V YA KA Sbjct: 11 NQGHLEIGGVDTTELVERFGTPLYVVDETLVRQRCQEFVSAFRDSGLKFQVAYASKAFCV 70 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +A+ + G LD+VS+GEL AL + P ERI F G KT EI++AL++GI CF V Sbjct: 71 KAMCRVAVEEGMSLDVVSDGELMTALESGFPPERIHFHGNNKTPQEIEMALRAGIGCFVV 130 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA- 183 ++ E++ L+ A G + + R+ P + A+TH+ ISTG+ + KFG + + A Sbjct: 131 DNFVEMQLLHSMAAEQGLRVNVLLRITPGVEAHTHEYISTGQTDSKFGFDLENGSAFQAV 190 Query: 184 -YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLG 241 AS L + G+ HIGSQI ++E F A + + Q+R + Q I++GGG G Sbjct: 191 QEASRLESFHLLGIHSHIGSQIFEVEGFQIAVEKVAAFAVQVRDEMGISFQVINLGGGFG 250 Query: 242 IAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 I Y ++ P S Y + +I +EPGR +V D G + V +IK Sbjct: 251 IRYTAEDTPLPVSQYVQAITNSIKTCFASYKYPIPEIWVEPGRSIVGDAGTTLYTVGTIK 310 Query: 295 KSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 +D M D RP LY + +E N A + + G CE+GD + Sbjct: 311 DIPGVRKYVSVDGGMTDNPRPALYQSVYEAIL-ANRAKEEAAEVISVAGKCCESGDMLIW 369 Query: 354 NRKIALPRPGDLLYIEKTGAY 374 + K+ + GD+L + TGAY Sbjct: 370 DVKLPKVQTGDILAVFCTGAY 390 >gi|282850320|ref|ZP_06259699.1| putative diaminopimelate decarboxylase [Veillonella parvula ATCC 17745] gi|282579813|gb|EFB85217.1| putative diaminopimelate decarboxylase [Veillonella parvula ATCC 17745] Length = 418 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 95/403 (23%), Positives = 150/403 (37%), Gaps = 14/403 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE + TPF+ Y I +N +F NAF +A+KA N +++ L LG Sbjct: 13 LENIIAQYPTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRLLQKLGV 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+F+ E AL+ G + Sbjct: 73 GADCSSLAELLLCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNH 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 R NP I +E K+G+ QI Y Sbjct: 133 GSLPDTFC---VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIH 189 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + +++D A + G I+ ID+GGG+G+AY + P Sbjct: 190 TMVVSNELDIDGLVGTAELCFNLAVDIKKELGITIEFIDLGGGVGVAYKPEQTPVDFRVL 249 Query: 257 ASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + + E GR + G LV+ I K + ++ LD M Sbjct: 250 SKGVEEAYNRILVANGLNDVALAYECGRMVTGPFGYLVSTAIHKKDI-YRHYIGLDACMA 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP LY +YH I + + H+ D+ G +CE D A+ R++ GD + I Sbjct: 309 NLMRPALYGSYHHITVMGKENAPKDHV-YDVTGSLCENNDKFAIQRELPKIDIGDRVIIH 367 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELI 411 GA+G YN +L E+++ IR T+ +L Sbjct: 368 DAGAHGHSMGFNYNGKLRSAELLLHKDGSVTQIRRAETYDDLF 410 >gi|241667894|ref|ZP_04755472.1| diaminopimelate decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876434|ref|ZP_05249144.1| diaminopimelate decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842455|gb|EET20869.1| diaminopimelate decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 394 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 137/373 (36%), Positives = 200/373 (53%), Gaps = 7/373 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP Y Y +T +E + + A D + + YA+KAN + ++ G G+D VS G Sbjct: 23 TPCYIYDSTLLEDTFASAKKALDKNFKNAEIHYAIKANHHPKIVNIAKKNGMGIDCVSGG 82 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E+RRAL V + IVF+GVGK EI+LA+ + I+ FN ES E++ ++Q A K+ Sbjct: 83 EIRRALEQNVDPQHIVFAGVGKADWEIELAIDNNIFAFNSESLEEIEVISQIASLKNKQV 142 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIP-IHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 I RVNP+I+A TH ISTG+ +DKFGI I + L + I G+ H+GSQ Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFIDVLKWLKNDFQNFDNINIIGLHYHVGSQ 202 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP---SSSDYASLI 260 I + F + + L+ N NI+HI+ GGGLGI Y + H+ P + +A Sbjct: 203 ILNYQVFQSLAITTNEHIKLLKQNDINIEHINFGGGLGIDYQNPHQNPIVDFDNYFARFR 262 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + K+ E GR LV G+LV++V+ K + D F I+D M + +RP LY A Sbjct: 263 EFFEYCDDVKLHFELGRSLVGQSGVLVSQVLFNKVTQDTHFAIIDAGMTELIRPALYQAQ 322 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 H+I +++ + D H IVGPICE+ D A ++ + GDLL I GAYG V + Sbjct: 323 HKIEALIDESVD-EKQHYHIVGPICESSDVFAKYYQLPKIKRGDLLAIYSAGAYGKVLAS 381 Query: 381 TYNSRLLIPEIMV 393 YN R + E + Sbjct: 382 EYNLRPTVQEYFI 394 >gi|260906191|ref|ZP_05914513.1| diaminopimelate decarboxylase [Brevibacterium linens BL2] Length = 478 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 111/429 (25%), Positives = 182/429 (42%), Gaps = 24/429 (5%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALK 60 G L ++ LA TP + + +A+ V YA K Sbjct: 42 GVLTIAGHAVTDLAERYGTPTLVMDVADFKARAENYVSAYSAAFSEDKGLAGVDVFYAGK 101 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A AV + + G G+D S GE+ A AA VP ER+ G K+ E++ AL G+ Sbjct: 102 AFLCTAVARWVHESGLGVDTCSLGEMMVARAAGVPGERVGLHGNNKSAAELEYALDYGVG 161 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQI 178 V+S E+ L A + G AP+ RV + A+TH I+T ++ KFG+ + Sbjct: 162 RIFVDSLDEISLLESIAAARGVLAPVMLRVTVGVEAHTHDFIATAHEDQKFGLSVSAGTA 221 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVG 237 + ++ G+ HIGSQI I F A + L + + +G ++ ID+G Sbjct: 222 AKAAEAVANSAHLRFDGLHSHIGSQIFDISGFQVAAARVLALRAEIMAEHGVDLPDIDLG 281 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKV 290 GG GI Y S P ++ A + + +I +EPGR +V+ + +V Sbjct: 282 GGFGIRYTSQDTPIPVAEMAQELAEVVAKECRGLGTNVPRISIEPGRAIVSPSMFTLYQV 341 Query: 291 ISIKKSADKT----FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 ++K+ +V +D M+D +R LYDA + + N + +VG CE Sbjct: 342 GTVKEVDTDNGLRTYVAVDGGMSDNIRTALYDADYSCT-LANRNSGSEPVIVRVVGKHCE 400 Query: 347 TGDFIALNRKI-ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 +GD I + + + GDL+ + TGAY + YN + V + I Sbjct: 401 SGDIIVRDEYMGSDVSSGDLVAVPSTGAYCRSLANNYNHLPKPGVLAVTTDKVEWIVTPE 460 Query: 406 TFQELIELD 414 + +++ D Sbjct: 461 DYSQMLRSD 469 >gi|294791964|ref|ZP_06757112.1| protein TabA [Veillonella sp. 6_1_27] gi|294457194|gb|EFG25556.1| protein TabA [Veillonella sp. 6_1_27] Length = 418 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 94/403 (23%), Positives = 150/403 (37%), Gaps = 14/403 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE + TPF+ Y I +N +F NAF +A+KA N +++ L LG Sbjct: 13 LENIIAQYPTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRLLQKLGV 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+F+ E AL+ G + Sbjct: 73 GADCSSLAELLLCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNH 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 R NP I +E K+G+ QI Y Sbjct: 133 GSLPDTFC---VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIH 189 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + +++D A + G ++ ID+GGG+G+AY + P Sbjct: 190 TMVVSNELDIDGLVGTAELCFNLAVDIKKELGITVEFIDLGGGVGVAYKPEQTPVDFRVL 249 Query: 257 ASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + + E GR + G LV+ I K + ++ LD M Sbjct: 250 SKGVEEAYNRILVANGLNDVALAYECGRMVTGPFGYLVSTAIHKKDI-YRHYIGLDACMA 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP LY +YH I + + H+ D+ G +CE D A+ R++ GD + I Sbjct: 309 NLMRPALYGSYHHITVMGKENAPKDHV-YDVTGSLCENNDKFAIQRELPKIDIGDRVIIH 367 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELI 411 GA+G YN +L E+++ IR T+ +L Sbjct: 368 DAGAHGHSMGFNYNGKLRSAELLLHKDGSVTQIRRAETYDDLF 410 >gi|253579002|ref|ZP_04856273.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849945|gb|EES77904.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 426 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 98/410 (23%), Positives = 157/410 (38%), Gaps = 15/410 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N AF +A+KA N +I+ L G Sbjct: 12 LQEITAQFPTPFHLYDEKGIRENAKAVKEAFAWNKGFKEFFAVKATPNPFLIQILQEYGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A I+FS +E A + G + + Sbjct: 72 GCDCSSMTELMMSKAIGCKEGDIMFSSNDTPEEEFKYANEIGGIINLDDI---THIESVE 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ QI + + Sbjct: 129 RAVGYIPKVISCRYNPGGVFKISNDIMDNPGDAKYGMTTEQIFEAFKILKEKGAEEFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A ++ + + G +++ I++ GG+GIAY D P + Sbjct: 189 AFLASNTVTNEYYPMLAKEMFEMAVKLQKETGAHVKFINLSGGVGIAYKPDQTPNDIREI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++ G LVTK I K + K ++ +D Sbjct: 249 GEGVRKVYEEVLVPAGMGDVAIYTEMGRFMMGPYGCLVTKAIHEKHT-HKEYIGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + H+ D+ G +CE D A++R + GDLL I Sbjct: 308 NLMRPAMYGAYHHITVMGKEDQPCDHM-YDVTGSLCENNDKFAIDRYLPKVDMGDLLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE-LDSIP 417 TGA+G YN +L EI++ F +IR T ++ D P Sbjct: 367 DTGAHGFAMGYNYNGKLKSSEILLHEDGSFEMIRRAETPKDYFATFDCFP 416 >gi|315650185|ref|ZP_07903260.1| diaminopimelate decarboxylase [Eubacterium saburreum DSM 3986] gi|315487542|gb|EFU77850.1| diaminopimelate decarboxylase [Eubacterium saburreum DSM 3986] Length = 423 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 91/411 (22%), Positives = 159/411 (38%), Gaps = 16/411 (3%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIK 69 L E V +++ TP++ Y I +N + AF +A+KA N ++ Sbjct: 7 LTLEQV--KEIVKTYPTPWHIYDEKGIRENAKRLNEAFGWNKGFKEYFAVKATPNPFIMN 64 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 L G G+D S EL + A + I+FS I+E A G + Sbjct: 65 ILKEYGCGVDCSSMVELEMSDACGFSGKDIMFSSNETPIEEFKFANDLGAIINLDDITHI 124 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 R NP I + K+G+ Q+ + + Sbjct: 125 KYVEEVCGKLPKTMCA---RYNPGGVFTMSNGIMDNPGDAKYGMTPDQLIEAFKIMQSKG 181 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + A +L + G N++ I++ GG+GI Y D Sbjct: 182 VKHFGIHAFLASNTVTNEYYPKLARELFEFAVRIKNETGINVEFINLSGGIGIPYTPDSE 241 Query: 250 PPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 P + ++ + + + + I E GR+++A G L+T+ I K K ++ Sbjct: 242 PNDIFEISNGVKKAYEEVLEANAIMDVAIFTELGRYMLAPYGALITEAIHEKNI-YKHYI 300 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +D ++ MRP +Y AYH + + ++ D+VG +CE D A++RK+ Sbjct: 301 GVDACASNLMRPAMYGAYHHLTVLGK-ENEKASEVYDVVGSLCENNDKFAIDRKLPKIEK 359 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GD +YI TGA+G YN +L E+++ +IR T ++ Sbjct: 360 GDYIYIHDTGAHGFAMGYNYNGKLRSAELLLQEDGSVKMIRRAETDKDYFA 410 >gi|66825991|ref|XP_646350.1| group IV decarboxylase [Dictyostelium discoideum AX4] gi|60474341|gb|EAL72278.1| group IV decarboxylase [Dictyostelium discoideum AX4] Length = 421 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 97/422 (22%), Positives = 166/422 (39%), Gaps = 15/422 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYA 58 M + L+ + + + TPF+ Y+ I++N N+F + +A Sbjct: 1 MEPIINEKKELNFLEKDIIEAVNKYPTPFHIYNGDKIKENGELLMNSFKKYFPNYRNYFA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KA N +++K L +G G+D S EL + E I+F+ +E A + G Sbjct: 61 VKATPNPSILKLLKEIGMGVDCSSLAELILSEKVGFKNEEIMFTSNNTKSEEYKKAYELG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + + + + P I K+ KFG+ + Sbjct: 121 SIINLDDYTQIEYLYESLGGVMPELISFRYNPGP---LKKGNDIIGNPKDAKFGLTSDDL 177 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 Y A L + M +++D A L +++ +S G + +++GG Sbjct: 178 EKAYNKAKELGVKRFGLHCMVASNELDLDYFEETARLLFSTISKLTKSCGITFEMVNLGG 237 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGN--------LQCKIILEPGRFLVADVGILVTKV 290 G+GI Y + I + + ++ E GR + G+LVTK Sbjct: 238 GIGIPYRPNQIAVDYLKLTEKISNAYKELIVEEEGLPKLNVVTECGRVITGPYGVLVTKA 297 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 I K S K ++ +D M + MRP +Y AYH ++NP D+VG +CE D Sbjct: 298 IHSK-STYKEYIGVDACMVNLMRPGMYGAYHH-ITVLNPTDPNSTETYDVVGSLCENNDK 355 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 ++R + GD L I TGA+G YN +L E ++ + + IR TF +L Sbjct: 356 FCIDRSLPKIHRGDTLVIHDTGAHGHSMGFNYNGKLRSAEYLLLNNSINCIRRAETFDDL 415 Query: 411 IE 412 Sbjct: 416 FS 417 >gi|333030136|ref|ZP_08458197.1| diaminopimelate decarboxylase [Bacteroides coprosuis DSM 18011] gi|332740733|gb|EGJ71215.1| diaminopimelate decarboxylase [Bacteroides coprosuis DSM 18011] Length = 386 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 139/370 (37%), Positives = 198/370 (53%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TPFY Y T +++ T G D V YALKAN N +++ + G G D V Sbjct: 11 KNLDTPFYYYDTCLLQETLDTVKLQLKGQDQFKVHYALKANVNSEILQMIRKNGFGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A E IVF+GVGK+ EI+L L GI+CFNVES EL+ +N+ A+++G Sbjct: 71 SGGEIRAAIQAGFKPENIVFAGVGKSDWEIELGLDLGIFCFNVESIPELEIINELALNMG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K+A + R+NP++ ANTH I+TG+ E+KFGI +H + + L + G+ HIG Sbjct: 131 KRAQVCLRINPNVKANTHANIATGQAENKFGISLHDLDKVMECVKQLKAIDFVGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG--GLGIAYHSDHRPPSSSDYAS- 258 SQI + F + +L +L G I HI+VGG G+ A+ + P+ Y Sbjct: 191 SQILDMADFRALCNRVNELLDRLEGRGIRIPHINVGGGLGIDYAHPNRQAIPNFESYFDV 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + E GR LV G L+++V+ +K+ +K F ILD MND +RP LY Sbjct: 251 YDTHLRIRSYQTLHFELGRSLVGQCGSLISRVLYVKEGTNKKFAILDAGMNDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH I N + D D+VGP+CE+ D + + GD + I GAYG V Sbjct: 311 AYH---KIENLSSDEALEAYDVVGPVCESSDVFGKSIDLNKVSRGDFMAIRSAGAYGEVM 367 Query: 379 SGTYNSRLLI 388 + TYN R L Sbjct: 368 ASTYNCRSLP 377 >gi|330833331|ref|YP_004402156.1| putative diaminopimelate decarboxylase [Streptococcus suis ST3] gi|329307554|gb|AEB81970.1| putative diaminopimelate decarboxylase [Streptococcus suis ST3] Length = 415 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 94/404 (23%), Positives = 152/404 (37%), Gaps = 18/404 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE + TPF+ Y I + + AF +A+KA A++K L G Sbjct: 12 LETITEQFPTPFHLYDEKGIREKARALNAAFAWNKGFKEYFAVKATPTPAILKILQEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D ++ E+ + I+F+ E A + G + + Sbjct: 72 GVDCATDVEVLMSEKLGFK--DIMFTSNDTQAQEFVYARKVGATINLDA----YEHIEFL 125 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G + R NP + I +E KFG+ Q+ Y L + Sbjct: 126 KNVAGIPETVCLRYNPGGVFSLGTDIMDHPEESKFGMTKEQLMKGYKELKELGVKEFGIH 185 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + ID+ GG+G+ Y + P + Sbjct: 186 AFLASNTVTNDYYPVLAHQLFELALEIREETDVTLDFIDLSGGIGVNYRPEQEPNDIAVI 245 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + KI E GRF++A G L+TKV+ K +T++ +D + Sbjct: 246 GEGVRKVYEEILTPAGMGHIKIFTELGRFMLAPHGHLITKVLHRK-ETYRTYIGVDASAA 304 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP Y AYH I I D D+ G CE D A+NR++ GD L I Sbjct: 305 NLMRPAFYGAYHHITNITR--PDAPIEVVDVAGSPCENNDKFAVNRELPRAEVGDTLVIH 362 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 +GA+G YN RL EI++ +IR T ++ Sbjct: 363 DSGAHGFSMGYNYNGRLRSSEILLQEDGTARMIRRAETPEDYFA 406 >gi|329296888|ref|ZP_08254224.1| diaminopimelate decarboxylase [Plautia stali symbiont] Length = 417 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 112/409 (27%), Positives = 179/409 (43%), Gaps = 28/409 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA PF+ Y I++ +AFD +V +A KA SN +++ + G +D Sbjct: 20 LAQRYSGPFWAYDAEIIQQRIAQL-SAFD----VVRFAQKACSNIHILRLMRAAGVKVDS 74 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RALAA + T D +D + I V + + + ++ Sbjct: 75 VSLGEIERALAAGFQPGGE---DIVFTADVLDSPTLARIAELKVPVNAGSVDMLHQLGAV 131 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + R+NP +K +TG + K GI + A + + Sbjct: 132 SPGHSVWLRINPGFGHGHSQKTNTGGENSKHGIWHSDLPLALAAIPQHGLQLV-----GL 186 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 I + ++ + Q+ + G ++Q I GGGL I Y + Y L Sbjct: 187 HMHIGSGVDYGHLQQVCDAMVDQVVAFGQDLQAISAGGGLSIPYRFSEEAIDTQHYYGLW 246 Query: 261 HQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + K+ +EPGRFLVA+ G+LV++V ++K+ + FV++D +D MRP Sbjct: 247 NGARERIAAHLGHAVKLEIEPGRFLVAESGVLVSQVRAVKQMGSRHFVLVDAGFSDLMRP 306 Query: 315 TLYDAYHEIN--YIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGDL 365 ++Y +YH I+ A ++ + + GP+CE+GD R + + GD Sbjct: 307 SMYGSYHHISLLPADGSAPGEANVESVVAGPLCESGDVFTQREGGKVETRALPAAKVGDY 366 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 L TGAYGA S YNSR LIPE++ IR T QEL+ L+ Sbjct: 367 LVFHDTGAYGASMSSNYNSRPLIPEVLFEQGVPREIRRAQTIQELLALE 415 >gi|71892045|ref|YP_277775.1| diaminopimelate decarboxylase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796151|gb|AAZ40902.1| diaminopimelate decarboxylase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 429 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 109/417 (26%), Positives = 181/417 (43%), Gaps = 28/417 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL+KL + P + Y + I FD ++ YA K+ SN +++ + + Sbjct: 16 SLKKLHKKYKGPVWVYDASIIINRITQLKQ-FD----VIRYAQKSCSNIHILRLMHNYEV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A A + + + T D ++ I N+ + + + Sbjct: 71 KVDAVSLGEIERALLAGFKAGKQ-SNEIVFTADILEEETLLRISELNIVVNAGSIDMLAQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + I R+NP ++K +TG + K GI I +Y I Sbjct: 130 LGACSPGHKIWLRINPGFGHGHNQKTNTGGENSKHGIWHEDIPIALSYIHHYDLQLI--- 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + I + K+ + QQ+ ++ I GGGL I Y + + Y Sbjct: 187 --GLHMHIGSGVRYDHLSKVCNAMVQQILKYKIDVDVISAGGGLTIPYEHNDMVLDVNHY 244 Query: 257 ASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + +EPGRFLVA+ GIL+T++ ++K ++ FV++D ND Sbjct: 245 FRLWNNARKYISQYLNHTVTLEIEPGRFLVAESGILITQIRAVKNMGNRHFVLIDAGYND 304 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIH---ADIVGPICETGDFIALN-------RKIA-L 359 MRP +Y +YH I+ + + + GP+CE+GD N RK+ Sbjct: 305 LMRPVMYGSYHHISLVPGDNRSVILETLCDTVVGGPLCESGDIFTQNMNGTILARKLPCS 364 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GD L TGAYGA S YN+R L+PE++ Q IR + ++L L+++ Sbjct: 365 AKVGDYLIFHDTGAYGASMSSNYNTRPLLPEVLFENGQIRQIRRKQKLEDLFMLETM 421 >gi|221194457|ref|ZP_03567514.1| Orn/DAP/Arg decarboxylase 2 [Atopobium rimae ATCC 49626] gi|221185361|gb|EEE17751.1| Orn/DAP/Arg decarboxylase 2 [Atopobium rimae ATCC 49626] Length = 429 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 100/414 (24%), Positives = 157/414 (37%), Gaps = 12/414 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQA 66 + LE++ TPF+ Y I + AF +A+KA N Sbjct: 2 KKHPFITKDELERITKKYPTPFHIYDEAEIVRRVRLLQKAFSWNPGFREFFAIKATPNPT 61 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +IK L LG G D + EL A A V I+ S ++ A G Sbjct: 62 IIKLLRDLGCGCDCATATELVLADACGVTGSNIMLSSNDTPPEDFKRAAAQGAIINLDAG 121 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 L TL+ A+ I R NP + I + KFG+ Q+ + Sbjct: 122 GDMLDTLD-VALGGVLPDSICARFNPGGTFESTNGIIGNPADAKFGMTEAQLFETFRVLR 180 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + +Q A L + R G +I +D+ GG+G+AY Sbjct: 181 DRGVKVFGLHAFLASNAREQDYYPKLARILFELAVRLHRELGIHIGFVDLSGGIGVAYRP 240 Query: 247 DHRPPSSSDYASLIHQYF-------GNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + + + + I E GR+L+A G LVT+V+ K + Sbjct: 241 EEASADVCAIGEGVRRAYEEVLVSENMDDVAIYSELGRWLLAPAGGLVTRVLHEKVT-YH 299 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 ++ +D + MRP +YDAYH I + + H+ +VG +CE D A +R + Sbjct: 300 DYLGVDACAANLMRPAIYDAYHHITVMGSEDVPADHV-YSVVGGLCENNDQFARDRALPK 358 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ-FHIIRPRMTFQELIE 412 GDLL+I TGA+G YN +L E++ + + +IR T + Sbjct: 359 VHVGDLLFIHDTGAHGFSMGYNYNGKLRSAELLYHEDKTVELIRRAETMADYFA 412 >gi|189467084|ref|ZP_03015869.1| hypothetical protein BACINT_03467 [Bacteroides intestinalis DSM 17393] gi|189435348|gb|EDV04333.1| hypothetical protein BACINT_03467 [Bacteroides intestinalis DSM 17393] Length = 386 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 131/370 (35%), Positives = 195/370 (52%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y T + A + V YA+KAN+N V+ + G G D V Sbjct: 11 RELRTPFYYYDTKVLRDTLSCVRAEAAKYGNFEVHYAVKANANSKVLSIIRENGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A P +IVF+GVGK+ EI+L+L I+CFNVES EL+ +N+ A + G Sbjct: 71 SGGEVRAAVKAGFPTNKIVFAGVGKSDWEINLSLDYNIFCFNVESIPELEIINELAAAKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NP++ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KVANVAFRINPNVGAHTHANITTGLAENKFGISMQDMDHVIEVALEMKNVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSSDYAS 258 SQI + F + +L +L ++ I+HI+VGGG + P +++ Sbjct: 191 SQILDMGDFVALCNRVNELQDKLEAHRIRIEHINVGGGLGIDYKHPNRQAIPDFKDYFST 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + E GR + G L+++V+ +K+ A+K F ILD M D +RP LY Sbjct: 251 YAEHLKLRSYQTLHFELGRAITGQCGSLISQVLYVKQGANKKFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH I N + D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AYH---KIENITSEDAVEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + +YN R L Sbjct: 368 ASSYNCRELP 377 >gi|50122573|ref|YP_051740.1| diaminopimelate decarboxylase [Pectobacterium atrosepticum SCRI1043] gi|49613099|emb|CAG76550.1| diaminopimelate decarboxylase [Pectobacterium atrosepticum SCRI1043] Length = 420 Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats. Identities = 112/406 (27%), Positives = 172/406 (42%), Gaps = 27/406 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL +L P + Y I FD + +A KA SN +++ + G Sbjct: 16 SLRELPVRFGCPVWAYDAQTIVNRITQLRQ-FD----TIRFAQKACSNTHILRLMHEQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A + T D +D + N+ + + ++ Sbjct: 71 KVDSVSLGEIERALIAGFVPGTD-AHEIVFTADLLDRPTLQRVSELNIPVNAGSVDMLEQ 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 P+ RVNP +K +TG + K GI + A+ +K+ G+ Sbjct: 130 LGQQSPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQRY-QLKLVGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH------SDHRP 250 MHIGS + + ++ + QQ+ G +I+ I GGGL I Y Sbjct: 189 HMHIGSGV----DYGHLEQVCEAMVQQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHY 244 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + A + +EPGRFLVA+ G+LV +V +IK + FV++D ND Sbjct: 245 YGLWNAAREKIAAHLGHPITLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDAGFND 304 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIH---ADIVGPICETGDFIALN-------RKIALP 360 MRP +Y +YH ++ + D + I GP+CE+GD + Sbjct: 305 LMRPAMYGSYHHVSLLSGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFSLPDA 364 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 + GD L TGAYGA S YNSR L+PE++ + +IR R T Sbjct: 365 QVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410 >gi|269798093|ref|YP_003311993.1| Orn/DAP/Arg decarboxylase 2 [Veillonella parvula DSM 2008] gi|269094722|gb|ACZ24713.1| Orn/DAP/Arg decarboxylase 2 [Veillonella parvula DSM 2008] Length = 418 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 94/403 (23%), Positives = 151/403 (37%), Gaps = 14/403 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE + TPF+ Y I +N +F NAF +A+KA N +++ L LG Sbjct: 13 LENIIAQYPTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRLLQKLGV 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+F+ E AL+ G + Sbjct: 73 GADCSSLAELILCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNH 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 R NP I +E K+G+ QI Y Sbjct: 133 GSLPDTFC---VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIH 189 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + +++D A + G ++ ID+GGG+G+AY + P Sbjct: 190 TMVVSNELDIDGLVGTAELCFNLAVDIKKELGITVEFIDLGGGVGVAYKPEQTPVDFRAL 249 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + + + E GR + G LV+ I K + ++ LD M Sbjct: 250 SKGVEEAYNRILVANGLIDVALAYECGRMVTGSFGYLVSTAIHKKDI-YRHYIGLDACMA 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP LY +YH I + + H+ D+ G +CE D A+ R++ GD + I Sbjct: 309 NLMRPALYGSYHHITVMGKENAPKDHV-YDVTGSLCENNDKFAIQRELPKIDIGDRVIIH 367 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELI 411 GA+G YN +L E+++ IR T+ +L Sbjct: 368 DAGAHGHSMGFNYNGKLRSAELLLHKDGSVTQIRRAETYDDLF 410 >gi|288802899|ref|ZP_06408336.1| diaminopimelate decarboxylase [Prevotella melaninogenica D18] gi|288334716|gb|EFC73154.1| diaminopimelate decarboxylase [Prevotella melaninogenica D18] Length = 385 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 132/370 (35%), Positives = 198/370 (53%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y + + + + +V YA+KAN+N V+K + G G D V Sbjct: 11 KKIETPFYYYDCDLLRETLQAINKELKKYENFIVHYAIKANANAKVLKVIQQTGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE++R L PA++IV++GVGK+ EI+L L I+CFNVES +EL+ +N+ A G Sbjct: 71 SGGEIQRCLDCGFPADKIVYAGVGKSDWEINLGLDHDIFCFNVESVAELEVINELAAKKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A + FR+NPD+ A TH+KI+TG E+KFGI + + AS +P + G+ HIG Sbjct: 131 KTANVCFRINPDVGAQTHEKITTGLAENKFGIAMQDMLPTILEASRMPNIHFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---DYAS 258 SQ+ ++ F + ++ L I++I+VGGGLGI Y + P + + Sbjct: 191 SQLLEMTDFRHLCSRINEIQDGLEQENIKIKNINVGGGLGIDYDNPDNHPIPDFKSYFYT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 K+ E GR +V +G L+T+ + +K+ K F I+D M D +RP LY Sbjct: 251 FARYLKLREGQKLHFELGRAVVGQMGSLITRTLYVKQGTAKQFAIVDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A H I N + D D+VGPICE+ D A ++ GDL+ + GAYG + Sbjct: 311 ASH---KIENLSSDGALHAYDVVGPICESSDVFAKGIELNTVHRGDLIAMRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASQYNCRKLP 377 >gi|91772657|ref|YP_565349.1| diaminopimelate decarboxylase [Methanococcoides burtonii DSM 6242] gi|91711672|gb|ABE51599.1| Orn/DAP/Arg decarboxylase family / TabA-like [Methanococcoides burtonii DSM 6242] Length = 420 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 95/401 (23%), Positives = 149/401 (37%), Gaps = 16/401 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 + ++ TPF+ Y AI N +AF + +A+KA N ++K L G Sbjct: 13 ILEIKKQFPTPFHIYDEKAIRTNARKLKDAFSIVEGFQEFFAVKALPNPYILKILKSEGF 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A + E I+FS +E A + G + + Sbjct: 73 GADCSSLPELLLAEKTGIVGENIMFSSNDTPAEEFVKAKELGAIINLDDISHIEFLEKEA 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + NA I +E K+G Q+ Y + Sbjct: 133 ELPELVCFRFNPGPLKEGNA-----IIGNPEEAKYGFTKKQLFEGYRMLKEKGVKRFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M ++++ A L + + +++GGG+GI Y D Sbjct: 188 TMVASNELEPSYFVETAKLLFEVIVEISNELDIRFDFVNLGGGIGIPYRLDQEAVPYDVI 247 Query: 257 ASLIHQYFGNLQC-------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 A + + KI LE GR + G LVT+V +K K +V D M Sbjct: 248 AEGVRDEYEKSIKANGLDPLKIYLECGRTITGPYGYLVTEVRHLKHI-YKDYVGTDACMA 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP LY AYH I + D+ G +CE D A++R + GD+L I Sbjct: 307 NLMRPGLYGAYHHITVLGK-ENKPEDHLYDVTGSLCENNDKFAIDRMLPEVERGDILAIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQE 409 +GA+G YN +L E+++ S IR T ++ Sbjct: 366 DSGAHGHAMGFNYNGKLRSAELLLREDSSVVQIRRAETIED 406 >gi|332671323|ref|YP_004454331.1| diaminopimelate decarboxylase [Cellulomonas fimi ATCC 484] gi|332340361|gb|AEE46944.1| diaminopimelate decarboxylase [Cellulomonas fimi ATCC 484] Length = 481 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 118/445 (26%), Positives = 185/445 (41%), Gaps = 38/445 (8%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLT----FSNAFD--GMDTMVCYALKA 61 +G++ V + LA TP Y + T F+ AF G V YA KA Sbjct: 36 DGAVRVAGVDVRALAAEHGTPAYVLDEQDLRTRARTYRRAFTEAFAEIGAGVDVYYAGKA 95 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + AV + + G +D S GEL AL A VP I G K+ EI AL +G+ Sbjct: 96 FLSVAVARWVHEEGLRVDTASGGELAVALRAGVPGAEIGLHGNNKSDGEIAAALDAGVGR 155 Query: 122 FNVESESELKTLNQRAVSLGKKA-PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 V+S E++ + + G P+ RV ++A H+ IST ++ KFG+ + Sbjct: 156 IIVDSLVEIERVADAVAARGGAPAPVMVRVTTGVHAGGHEYISTAHEDQKFGLSLAPSRG 215 Query: 181 LYAYAST----------------LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL 224 + P +++ G+ HIGSQI F A + + L +L Sbjct: 216 TADTVAAADDDSPAMTALLAVVARPELRLLGIHSHIGSQILDPSGFAVAARAVLALRARL 275 Query: 225 RSNGHN-IQHIDVGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPG 276 + ++ +D+GGG GIAY + A G + +EPG Sbjct: 276 AARTGVLVEEVDLGGGYGIAYLPGEVALDADRIAKEVAASVERSAAEVGTDLPRFSIEPG 335 Query: 277 RFLVADVGILVTKVISIKKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 R +V G+ + V ++K + +V +D M+D +RP LY A + + Sbjct: 336 RAIVGPAGLTLYSVGTVKPVRLDEGRTRLYVSVDGGMSDNIRPALYGAQYHAEVVGR-LS 394 Query: 332 DRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE 390 + A +VG CE+GD + + R GDLL + TGAYG + YN P Sbjct: 395 TAEPVLARVVGKHCESGDIVVHEVHLPGDVRAGDLLAVAATGAYGRSMASNYNLLTRPPV 454 Query: 391 IMVNGSQFHIIRPRMTFQELIELDS 415 + V ++ R T +L+ LD+ Sbjct: 455 VAVREGASRVLVRRETVDDLLALDT 479 >gi|313891660|ref|ZP_07825267.1| putative diaminopimelate decarboxylase [Dialister microaerophilus UPII 345-E] gi|313119938|gb|EFR43123.1| putative diaminopimelate decarboxylase [Dialister microaerophilus UPII 345-E] Length = 415 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 113/417 (27%), Positives = 163/417 (39%), Gaps = 13/417 (3%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAV 67 L L K+A TPFY Y IE N F +F + +A+KA N + Sbjct: 4 KKLPITEHRLYKIAEEYGTPFYIYDQKGIEDNINNFEKSFSWCSNFYKYFAVKATPNPWI 63 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 +K L ++G G D S EL A A + + IVFS +E A G + Sbjct: 64 LKLLHNMGIGADCSSMAELILAEAVGLKGKEIVFSSNNTADEEFIKANSLGAIINLDDIS 123 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 I+FR NP + ++ K+G+ Q+ A Sbjct: 124 M----FEDLERLKIIPEKISFRYNPGNKVSIGNNFIGKPEDAKYGMTKEQLLESVQIAKK 179 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 L I M + S++ L + + ID GGG+GI Y D Sbjct: 180 LKIPFIGIHTMIVSSELTLDVLIANIRMLFELAIEIREKFNVIVDFIDFGGGIGIPYRPD 239 Query: 248 HRPPSSSDYASLIHQYFGNLQ-----CKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 R + + H+ F ++ ++ E GR + G LVTK I K K ++ Sbjct: 240 DRAVNLFELGKRTHELFKSMMSGFEKTQLSFECGRAITGPYGYLVTKAIHHKNI-YKKYI 298 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +D M D MRP +Y AYHEI + I DIVG +CE D A+NRK+ Sbjct: 299 GVDACMADLMRPGIYGAYHEITVCSKEDTNETEI-YDIVGSLCENNDKFAINRKLPKISK 357 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDSIPA 418 GDL+ I TGA+G YN +L E++++ IR T +L P Sbjct: 358 GDLIVIHDTGAHGHSMGFNYNGKLRHQELLLHSDGTIQKIRRNETLNDLFSTLDFPG 414 >gi|293526768|ref|ZP_06671453.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M1015] gi|290920840|gb|EFD97903.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus M1015] Length = 397 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 114/397 (28%), Positives = 183/397 (46%), Gaps = 21/397 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 LQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I ++ A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 NKVQQSKYLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKE---QDIQVELLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y I +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE 390 K+ + GD L I TGAY + YN Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSV 395 >gi|282924293|ref|ZP_06331967.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C101] gi|282313680|gb|EFB44073.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C101] Length = 404 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 114/397 (28%), Positives = 183/397 (46%), Gaps = 21/397 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSN 64 G L + +SL+ +A TP Y I + + AF G+ + YA KA + Sbjct: 7 QNGELTMDGISLKTIAQSFGTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTC 66 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K +A LD+VSEGEL AL A RI F G KT EI AL++ I F + Sbjct: 67 LQMVKLVAEEDLQLDVVSEGELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVI 126 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I ++ A Sbjct: 127 DSLEEIELIDRYANDTV---QVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAI 183 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +K+ GV HIGSQI+ E+F + K++ ++ ++ +++GGG GI Sbjct: 184 NKVQQSKYLKLKGVHCHIGSQIEGTEAFIETAKIVLRWLKE---QDIQVELLNLGGGFGI 240 Query: 243 AYHSDHRPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKK 295 Y I +I +EPGR +V + G+ + +V +IK+ Sbjct: 241 KYVEGDESFPIESGIKDITDAIKSEIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKE 300 Query: 296 SADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D M+D +R LYDA ++ + + I G +CE+GD I + Sbjct: 301 IPEINKYVSIDGGMSDHIRTALYDAKYQALLVNR--NEEADDSVTIAGKLCESGDIIIKD 358 Query: 355 RKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE 390 K+ + GD L I TGAY + YN Sbjct: 359 AKLPSSVKRGDYLAILSTGAYHYSMASNYNQMQKPSV 395 >gi|325298093|ref|YP_004258010.1| diaminopimelate decarboxylase [Bacteroides salanitronis DSM 18170] gi|324317646|gb|ADY35537.1| diaminopimelate decarboxylase [Bacteroides salanitronis DSM 18170] Length = 386 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 134/370 (36%), Positives = 193/370 (52%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 V+TPFY Y+ + + A V YA+KAN+N ++ + G G+D V Sbjct: 11 QNVETPFYYYNADLLRETLNVIRTEAGKYNKFCVHYAIKANANPKILGIIRESGLGVDCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E+ A+ A PA +IVF+GVGKT EI+LAL I+CFNVES EL+ +NQ A Sbjct: 71 SGWEIEAAIQAGFPASKIVFAGVGKTDKEINLALDHDIFCFNVESVPELEVINQLAAGKN 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KIARVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDRALEMNHVKFVGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSSDYAS 258 SQI + F + +L ++L + ++HI+VGGG + P + +A+ Sbjct: 191 SQILDMGDFIALCNRVNELQEKLYARQIIVEHINVGGGLGIDYAHPNRQSIPDFAEYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L+T+VI +K+ +K F I+D M D +RP LY Sbjct: 251 YHKHLKLRPQQTLHFELGRSVVGQCGSLITRVIYVKQGTNKQFAIVDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH I N + + D+VGPICE+ D + GD L + GAYG + Sbjct: 311 AYH---KIENISSEEPVETYDVVGPICESSDVFGKAIDLNRTHRGDFLALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRPLP 377 >gi|227825186|ref|ZP_03990018.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905685|gb|EEH91603.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 421 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 88/404 (21%), Positives = 148/404 (36%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 +E++A TPFY Y I + + AF +A+KA N ++K L G Sbjct: 12 VEEIAKTYPTPFYIYDEKGIRETARKINQAFSWNKGYKEYFAVKATPNPYILKILQEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+FS + LA + G + ++ Sbjct: 72 GTDCSSYTELLMSKVCGFSGRDIMFSSNDTPDQDYRLAAELGAIINLDDFTM----IDTV 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 +G I R NP I + K+G+ Q+ + + Sbjct: 128 ERLVGIPETICCRYNPGGTFALGNDIMDNPGDSKYGMTKAQLMEAFKILKKKGAKEFGIH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G + I++ GG+GI Y D P Sbjct: 188 AFLASNTVTNEYYPELARQLFELAVEVKHETGIAVSFINLSGGVGIPYRPDQTPNDILAI 247 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + +++ E GRF+ G L+ + I K K +V LD Sbjct: 248 GEGVHRVYDEVFGPEGMTDVRLMTEMGRFVTGPYGALIARAIHFKHI-YKEYVGLDACAA 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +Y AYH I + H D+ G +CE D A++R + GD L++ Sbjct: 307 NLIRPAMYGAYHHITVLGKENAPCDH-KYDVTGGLCENNDKFAVDRMLPEIEEGDYLFLH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+ YN +L E+++ +IR T ++ Sbjct: 366 DAGAHCYAMGYNYNGKLWCAELLLQEDGTVKMIRRAQTPKDYFA 409 >gi|308187988|ref|YP_003932119.1| Diaminopimelate decarboxylase [Pantoea vagans C9-1] gi|308058498|gb|ADO10670.1| Diaminopimelate decarboxylase [Pantoea vagans C9-1] Length = 418 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 116/411 (28%), Positives = 182/411 (44%), Gaps = 29/411 (7%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA PF+ Y I+ AFD +V +A KA SN +++ + G +D Sbjct: 20 LARRYAGPFWAYDAQIIQARIAQLQ-AFD----VVRFAQKACSNIHILRLMRAAGVKVDS 74 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RALAA + T D D + I V + + + ++ Sbjct: 75 VSLGEIERALAAGYQSGGDEI---VFTADLFDQPTLARITALKVPVNAGSIDMLHQLGAV 131 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + RVNP +K +TG + K GI + A A G+K+ G+ MHI Sbjct: 132 SPGHAVWLRVNPGFGHGHSQKTNTGGENSKHGIWHDDLDEALA-AIKQHGLKLVGIHMHI 190 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 GS + + ++ + + + ++G ++ I GGGL I Y + Y L Sbjct: 191 GSGV----DYSHLQQVCDAMVELVMASGQDLTAISAGGGLSIPYRYGEEAIDTDHYFGLW 246 Query: 261 HQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + +EPGRFLVA+ G+LV++V ++K + FV++D +D MRP Sbjct: 247 DAARQRIAQHLGHAVKLEIEPGRFLVAEAGVLVSQVRAVKSMGSRHFVLVDAGFSDLMRP 306 Query: 315 TLYDAYHE---INYIVNPAGDRLHIHADIVGPICETGDFIA-------LNRKIALPRPGD 364 ++Y +YH + ++ I + GP+CE+GD R + + GD Sbjct: 307 SMYGSYHHISLMAGDERAIDEQQTIDTVVAGPLCESGDVFTQLEGGMVEPRAMPTAKVGD 366 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 L TGAYGA S YNSR LIPE++ Q IR T + L+ L+ Sbjct: 367 YLVFHDTGAYGASMSSNYNSRPLIPEVLFEQGQPREIRRAQTIESLLALEI 417 >gi|323345490|ref|ZP_08085713.1| diaminopimelate decarboxylase [Prevotella oralis ATCC 33269] gi|323093604|gb|EFZ36182.1| diaminopimelate decarboxylase [Prevotella oralis ATCC 33269] Length = 385 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 138/366 (37%), Positives = 197/366 (53%), Gaps = 7/366 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TPFY Y T + + D + V YA+KAN+N ++ + G G D VS GE Sbjct: 15 TPFYYYDTDILRETLNVIHKEVDKYENYKVHYAIKANANPKILNIICQSGFGADCVSGGE 74 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + A++ P +IV++GVGK+ EI+L L I+CFNVES EL+ +N+ A K A Sbjct: 75 INAAISTGFPTSKIVYAGVGKSDWEINLGLDKDIFCFNVESLEELEVINELAEKKDKTAK 134 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 IA R+NPD+ A+TH I TG E+KFGI I + ++ A+++ +KI G+ HIGSQI Sbjct: 135 IALRINPDVGAHTHVNIKTGLAENKFGISIIDMENVITQAASMKNIKIIGLHFHIGSQIL 194 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F + DL + L N ++HI+VGGGLGI Y +R P ++ + Sbjct: 195 DMGDFIALCNRINDLQEHLERNRFLVKHINVGGGLGINYEHPNREPIPDFHSYFNAYHRH 254 Query: 266 ---NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + E GR +V G L+T+V+ +K+ K FVI+D M D +RP LY AYH Sbjct: 255 LKLRDGQILHFELGRSVVGQCGSLITRVLYVKQGTHKQFVIVDAGMTDLIRPALYQAYH- 313 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I N + D D+VGPICE+ D A + + GDL+ I GAYG + + Y Sbjct: 314 --KIENISSDEKMRTYDVVGPICESSDVFAKSIDLNTTHRGDLIAIRSAGAYGEIMASQY 371 Query: 383 NSRLLI 388 N R L Sbjct: 372 NCRKLP 377 >gi|323141339|ref|ZP_08076232.1| putative diaminopimelate decarboxylase [Phascolarctobacterium sp. YIT 12067] gi|322414188|gb|EFY05014.1| putative diaminopimelate decarboxylase [Phascolarctobacterium sp. YIT 12067] Length = 429 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 90/404 (22%), Positives = 145/404 (35%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LEK+ TPF+ Y I + + AF +A+KA N +++ L G Sbjct: 13 LEKIVSQYPTPFHLYDEAGIRRTARLVNKAFSWNKGFKEYFAVKATPNPYLLQILREEGC 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A I+FS ++ LA + + + Sbjct: 73 GADCSSYTELLMSDAVGFKESEIMFSSNATPAEDFKLARKLNVNINLDDITHIDFLEK-- 130 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + R NP + I + K+G+ QI Y + Sbjct: 131 --VADIPETVCCRYNPGGHFAIANNIMDNPGDAKYGMTHEQIIEAYKILKSKGVKNFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + G +I I++ GG+GIAY + + Sbjct: 189 AFLASNTVTNEYYPELARILFELAVELKEKTGAHISFINLSGGIGIAYKPEQQDNDVLAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + F K+ E GR+++A G LVT I K + A N Sbjct: 249 GEGVRKVFEEVLVPAGMGDVKLFTELGRYMLAPNGALVTTAIHQKHIYKEYIGCDACAAN 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y +YH I+ + H D+ G +CE D A++R + GDLL+I Sbjct: 309 LM-RPAIYGSYHHISVMGKENAPCDH-KYDVTGGLCENNDKFAVDRMLPEINIGDLLFIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+G YN +L E+++ +IR T + Sbjct: 367 DAGAHGFSMGYNYNGKLRSAELLLQEDGSVKMIRRAETPADYFA 410 >gi|326202520|ref|ZP_08192388.1| Orn/DAP/Arg decarboxylase 2 [Clostridium papyrosolvens DSM 2782] gi|325987104|gb|EGD47932.1| Orn/DAP/Arg decarboxylase 2 [Clostridium papyrosolvens DSM 2782] Length = 417 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 105/415 (25%), Positives = 191/415 (46%), Gaps = 18/415 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +A TP Y Y T I Y N+ + + Y++KAN + + LGS Sbjct: 6 LNDIATEYGTPVYVYDTEKIISQYTLLKNSLPQ-EFGIFYSMKANPLVGICQLFKKLGSC 64 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 ++ S GEL AL+A ++I+F+ GKT DE++ A+++ IY N+ES E + +N+ A Sbjct: 65 IETASSGELHAALSAGFSPDKIIFTSPGKTYDELEYAVETDIYSINIESLDEAEAINKIA 124 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 +G+ I+ R+NPD + +G +FGI + S++ TL +K+ G+ Sbjct: 125 AKIGRVVDISIRINPDFDIAGSGIKMSGVAS-QFGIDQIHMESVFKELKTLTNLKVIGIH 183 Query: 198 MHIGSQIDQIESFHK-AFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 ++ G+Q S + ++++ + N++ +++GGG G+ Y D Sbjct: 184 IYTGTQALNAHSIVQSMEQIIQLALETSEKYCFNLRFLNLGGGFGVPYFKDDSTLDMDIL 243 Query: 257 AS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + ++ +E GRFL+A+ G +TKV+ K+ + +++ D N Sbjct: 244 RNEFGQVWDKYKDRLSDTQVFVESGRFLMAESGTYLTKVLYRKECKGRKYLVCDGGSNQH 303 Query: 312 MRPTLYDAYHEINYIVNPAGD-RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + N+ ++ ++VGP+C D I N + GD++ IEK Sbjct: 304 ASSAFLGRHIRNNFPMHILNKSGYEEPVNVVGPLCTPTDVIGQNVTLPEAVAGDVVAIEK 363 Query: 371 TGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQKTP 424 +GAYG QS + S L E+ + +I+R R ++ + L++ P Sbjct: 364 SGAYGITQSPGLFLSHPLPAEVQYYKGKTYILRERWEKEDFM--------LRQRP 410 >gi|238019149|ref|ZP_04599575.1| hypothetical protein VEIDISOL_01012 [Veillonella dispar ATCC 17748] gi|237863848|gb|EEP65138.1| hypothetical protein VEIDISOL_01012 [Veillonella dispar ATCC 17748] Length = 418 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 94/403 (23%), Positives = 151/403 (37%), Gaps = 14/403 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE + TPF+ Y I +N +F +AF +A+KA N +++ L LG Sbjct: 13 LENIIAQYPTPFHIYDEEGIIENMKSFIDAFSWNKGFKQYFAVKATPNPYIMRVLQKLGV 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+F+ E AL+ G + Sbjct: 73 GADCSSLAELMLCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNH 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 R NP I +E K+G+ QI Y Sbjct: 133 GSLPDTFC---VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIH 189 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + +++D A G N++ ID+GGG+G+AY + P Sbjct: 190 TMVVSNELDIDGLVGTAELCFNLAVDIKNELGINVEFIDLGGGVGVAYKPEQTPVDFKAL 249 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + + + E GR + G LV+ I K + ++ LD M Sbjct: 250 SKGVEEAYNRILVANGLGDVALAYECGRMVTGPFGYLVSTAIHKKDI-YRHYIGLDSCMA 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP LY +YH I + + H+ D+ G +CE D A+ R++ GD + I Sbjct: 309 NLMRPALYGSYHHITVMGKENAPKDHV-YDVTGSLCENNDKFAIQRELPKIDIGDRIIIH 367 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELI 411 GA+G YN +L E+++ IR T+ +L Sbjct: 368 DAGAHGHSMGFNYNGKLRSAELLLHKDGSVTQIRRAETYDDLF 410 >gi|319901715|ref|YP_004161443.1| diaminopimelate decarboxylase [Bacteroides helcogenes P 36-108] gi|319416746|gb|ADV43857.1| diaminopimelate decarboxylase [Bacteroides helcogenes P 36-108] Length = 386 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 130/366 (35%), Positives = 187/366 (51%), Gaps = 7/366 (1%) Query: 27 TPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TPFY Y T + + V YA+KAN+N V+ + G G D VS GE Sbjct: 15 TPFYYYDTQVLRDTLSGIRTEVSKYDNYSVHYAVKANANPKVLAIIRENGLGADCVSGGE 74 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R A+ A PA RIVF+GVGK EI++ L I+CFNVES EL+ +N+ A GK A Sbjct: 75 IRAAVKAGFPAGRIVFAGVGKADWEINIGLDYNIFCFNVESVPELEVINELAAVKGKVAN 134 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 +AFR+NP++ A+TH I+TG E+KFGI + + + A + VK G+ HIGSQI Sbjct: 135 VAFRINPNVGAHTHANITTGLAENKFGISMQDMDYVIDVAQEMKNVKFIGLHFHIGSQIL 194 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSSDYASLIHQ 262 + F + +L +L + I+HI+VGGG + P + + Sbjct: 195 DMGDFVALCNRINELQDKLEARRICIEHINVGGGLGIDYAHPNRQAIPDFKKYFTTYDEH 254 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + E GR +V G L+++V+ +K+ +K F ILD M D +RP LY A+H Sbjct: 255 LKLRSYQTLHFELGRSVVGQCGSLISRVLYVKQGTNKQFAILDAGMTDLIRPALYQAFH- 313 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I N D D+VGPICE+ D + + GD + + GAYG + + +Y Sbjct: 314 --KIENITSDAPMQTYDVVGPICESSDVFGKAIDLNTVKRGDFIALRSAGAYGEIMASSY 371 Query: 383 NSRLLI 388 N R L Sbjct: 372 NCRELP 377 >gi|319760400|ref|YP_004124338.1| diaminopimelate decarboxylase [Candidatus Blochmannia vafer str. BVAF] gi|318039114|gb|ADV33664.1| diaminopimelate decarboxylase [Candidatus Blochmannia vafer str. BVAF] Length = 428 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 115/436 (26%), Positives = 194/436 (44%), Gaps = 35/436 (8%) Query: 5 KYFEGSLHAENVS-LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 L N L+KL H + P + Y ++ I FD ++ +A K+ S Sbjct: 4 HIINELLRIHNYDNLKKLYHTYKGPVWIYDSSIIINRITQLRQ-FD----IIRFAQKSCS 58 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 N ++K + + G +D VS GE+ RAL A + S + T D ++ I Sbjct: 59 NIHILKLMYNNGVKIDAVSLGEIERALLAGFKFGKE-KSEIIFTADILEEETLLKILELK 117 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 + + + S + R+NP + K +TG + K GI + Sbjct: 118 IPVNIGSIDMIIQLGSCSPGHEVWMRINPGFGYGHNNKTNTGGENSKHGIWYEDVPIAL- 176 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + +K++G+ MHIGS + + K+ + +Q+ +++ I GGGL I Sbjct: 177 FYMRRYNLKLTGLHMHIGSGVH----YSHLSKVSTVMVEQILKYKIDLKVISCGGGLTIP 232 Query: 244 YHSDHRPPSSSDYASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 Y + + + Y ++ + ++ +EPGRFLVA+ GILVT++ +IK + Sbjct: 233 YKFTDQVVNVNRYFNIWDHARKSISKYLKHSIQLEIEPGRFLVAESGILVTQIRAIKTTG 292 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH------IHADIV--GPICETGD 349 + FV++D ND MRP +Y +YH I+ + +D+V GP+CE GD Sbjct: 293 SRRFVLIDAGYNDLMRPVMYGSYHHISIVFGERNSNDKDICLGEELSDVVVGGPLCEAGD 352 Query: 350 FIALN-------RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHII 401 RK+ + GD L TGAYGA S YN+R L+PE+++ + I Sbjct: 353 VFTQGANGEILSRKLPDSVKVGDYLIFHDTGAYGASMSSNYNTRPLLPEVLLEDGKIREI 412 Query: 402 RPRMTFQELIELDSIP 417 R + ++L L+ +P Sbjct: 413 RRKQKLEDLFALE-LP 427 >gi|313905720|ref|ZP_07839080.1| Orn/DAP/Arg decarboxylase 2 [Eubacterium cellulosolvens 6] gi|313469427|gb|EFR64769.1| Orn/DAP/Arg decarboxylase 2 [Eubacterium cellulosolvens 6] Length = 427 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 97/419 (23%), Positives = 159/419 (37%), Gaps = 15/419 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 +E++ V TPF+ Y I +N AF +A+KA A+IK L Sbjct: 12 IEEIIKTVPTPFHLYDEKGIRENARAVKEAFSWNPGFREYFAVKATPTPALIKILGEYDC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A I+FS +E A G + + Sbjct: 72 GCDCSSMTELMLSEAMGFDGNHIMFSSNDTPPEEYKKAADMGAIINLDDFTAIDIVEK-- 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 ++ R NP I + K+G+ Q+ + + Sbjct: 130 -TLGKLPKRMSCRYNPGGLFALSNGIMDNPGDSKYGMTTDQLFEAFRVMKAKGVEEFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + Q G ++ I++ GG+GI Y P Sbjct: 189 AFLASNTVTNEYYPKLAEVLFKLAVQLQNVTGAHVTFINLSGGVGIPYEPWQEPNDIRAI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + I E GRF++ G LVTK I+ K K ++ +D Sbjct: 249 GAGVEKVYNKVLVPAGMDDVSIFAEMGRFMMGPYGALVTKAINEKHI-YKEYIGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y +YH I + + H D+ G +CE D A++R + GD+LYI Sbjct: 308 NLMRPAMYGSYHHITVLGKENAECDH-KYDVTGSLCENNDKFAIDRMLPEIELGDILYIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE-LDSIPAWLQKTPKQ 426 TGA+G YN +L E+++ F +IR T ++ LD P + + P++ Sbjct: 367 DTGAHGFSMGYNYNGKLWSAEVLLKEDGSFEVIRRPETPKDYFATLDFTPEYKKMFPEE 425 >gi|297564795|ref|YP_003683767.1| diaminopimelate decarboxylase [Meiothermus silvanus DSM 9946] gi|296849244|gb|ADH62259.1| diaminopimelate decarboxylase [Meiothermus silvanus DSM 9946] Length = 394 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 111/398 (27%), Positives = 200/398 (50%), Gaps = 22/398 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L++ +TPFY Y T I +F + YA+KAN +++ L G Sbjct: 18 ALQEALQRYETPFYAYDLTRIHSRVKALRQSFPR--ARLLYAMKANPRLGILRRLRGWGV 75 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ VS GE+ RA A E ++ +G KT ++ +G+ V+S ++L+ + + Sbjct: 76 GLEAVSLGEVLRAYRAGYTPEEVLLNGPVKTPAMLEELRGAGLPILGVDSMADLERIARL 135 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A + RVNPD+ TH ++TG+ E KFGI ++ + A G++ G+ Sbjct: 136 ----LPGAKVILRVNPDLPIATHDHLATGRGESKFGILAAEVPASVRRAKQ-AGLEFLGL 190 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +H+GS ++ +E F + +++L L + + Q +++GGG G+ + ++ Sbjct: 191 HLHLGSALESLEDFQEGYRVLEALYE----SIGPTQVLNLGGGFGLNFDPAQVSEAAQKL 246 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 A ++ LEPGR+LVA+ G+L+T+V K++ + ++++D M +RP L Sbjct: 247 ADT-------FGAQLWLEPGRYLVAEAGVLLTRVWGTKRTR-RNYLLVDAGMMTLLRPML 298 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 Y A H + + D+ GP+CE+GD +A N + P+ GD L I + GAYG+ Sbjct: 299 YGAQHPVIPLYE---GPEVRAWDLAGPVCESGDVLARNVPLPTPKEGDALAILQAGAYGS 355 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S Y EI+ NG+++ ++R + + L+ + Sbjct: 356 SMSSNYLDHPRPLEILWNGAEWEVLRRPQSLEALLAEE 393 >gi|313893288|ref|ZP_07826863.1| putative diaminopimelate decarboxylase [Veillonella sp. oral taxon 158 str. F0412] gi|313442184|gb|EFR60601.1| putative diaminopimelate decarboxylase [Veillonella sp. oral taxon 158 str. F0412] Length = 418 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 95/403 (23%), Positives = 149/403 (36%), Gaps = 14/403 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE + TPF+ Y I +N +F NAF +A+KA N +++ L LG Sbjct: 13 LENIIAQYPTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRVLQKLGV 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+F+ E AL G + Sbjct: 73 GADCSSLAELLLCEKVGITGHDIMFTSNDTPYVEYKKALDMGAIINLDDITHIEYLEKHH 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 R NP I +E K+G+ QI Y Sbjct: 133 GSLPDTFC---VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIH 189 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + +++D A G N++ ID+GGG+G+AY + P Sbjct: 190 TMVVSNELDIDGLVGTAELCFNLAVDIKNELGINVEFIDLGGGVGVAYKPEQTPVDFKAL 249 Query: 257 ASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + + E GR + G LV+ I K + ++ LD M Sbjct: 250 SKGVEEAYNRILVANGLNDVALAYECGRMVTGPFGYLVSTAIHKKDI-YRHYIGLDSCMA 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP LY +YH I + + H+ D+ G +CE D A+ R++ GD + I Sbjct: 309 NLMRPALYGSYHHITVMGKEDAPKDHV-YDVTGSLCENNDKFAIQRELPKIDIGDRIIIH 367 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELI 411 GA+G YN +L E+++ IR T+ +L Sbjct: 368 DAGAHGHSMGFNYNGKLRSAELLLHKDGSVTQIRRAETYDDLF 410 >gi|188993964|ref|YP_001928216.1| diaminopimelate decarboxylase [Porphyromonas gingivalis ATCC 33277] gi|188995136|ref|YP_001929388.1| putative diaminopimelate decarboxylase [Porphyromonas gingivalis ATCC 33277] gi|188593644|dbj|BAG32619.1| diaminopimelate decarboxylase [Porphyromonas gingivalis ATCC 33277] gi|188594816|dbj|BAG33791.1| putative diaminopimelate decarboxylase [Porphyromonas gingivalis ATCC 33277] Length = 382 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 131/372 (35%), Positives = 192/372 (51%), Gaps = 10/372 (2%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPFY Y T +E+ + + D + YALKAN++ +++T+ G G D VS E+ Sbjct: 3 TPFYFYDLTLLERTLSALARSAGRHDVAIHYALKANNHPRILQTIGAAGFGADCVSGWEI 62 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A+ A PA I F+GVGK+ +EI LAL++ I F VES EL + + A S API Sbjct: 63 EAAIEAGFPASDIFFAGVGKSDEEILLALEARIGAFVVESVPELLNIERLAGSKNDIAPI 122 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP+++A+TH I+TG E+KFG+ +L + + G+ HIGSQI Sbjct: 123 LLRLNPEVDAHTHSHITTGLAENKFGLLPEDAFALMPHLLQSGSLVWRGLHFHIGSQIRS 182 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD--HRPPSSSDYASLIHQYF 264 + F + + + R+ G++ ID+GGGLGI Y P + Y + Sbjct: 183 AKVFEELCEKTNRILASFRTAGYSPDIIDMGGGLGINYDEPEAEPIPDFATYIERYRRMI 242 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH--- 321 + ++ +EPGR +VA G L+T+V+ IK+ K F I+D M D +RP LY+A+H Sbjct: 243 ETGEARLHIEPGRSVVAQCGSLITQVLYIKEGKAKKFAIVDAGMTDLVRPALYEAHHQIR 302 Query: 322 -----EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 E L D+VGPICE+ D + + GD L I GAYGA Sbjct: 303 LVQPGEWTMRATSPSAALTEKYDVVGPICESSDVFERELLMPELKRGDYLAIRSAGAYGA 362 Query: 377 VQSGTYNSRLLI 388 V + +YN R L Sbjct: 363 VMASSYNMRPLP 374 >gi|303232009|ref|ZP_07318715.1| putative diaminopimelate decarboxylase [Veillonella atypica ACS-049-V-Sch6] gi|302513339|gb|EFL55375.1| putative diaminopimelate decarboxylase [Veillonella atypica ACS-049-V-Sch6] Length = 418 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 95/403 (23%), Positives = 158/403 (39%), Gaps = 14/403 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE + TPF+ Y I N F +AF +A+KA N +++ L LG Sbjct: 13 LEAIIANYPTPFHIYDEEGIVNNMKRFISAFSWNKGFKQYFAVKATPNPYIMRVLQKLGV 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+F+ E AL G N++ + ++ L + Sbjct: 73 GADCSSLAELLLCEKVGITGHDIMFTSNDTPYVEYKKALDMGAI-INLDDITHIEYLEKH 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 SL + + P I +E K+G+ Q+ Y Sbjct: 132 HGSLPDTFCVRYNPGPLKEGG--NTIIGLPEEAKYGMTREQVFEAYKQLQVKGVKHFGLH 189 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + +++D A + G +++ ID+GGG+G+AY + P Sbjct: 190 TMVVSNELDIDGLVGTAEICFNLAVEIKEKLGIDVEFIDLGGGVGVAYKPEQTPVDFEKL 249 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + + + E GR + G LV+ I K + ++ LD M Sbjct: 250 GERVHEAYDRIIKGNGLKDIALAYECGRMVTGPFGYLVSTAIHKKDI-YRHYIGLDSCMA 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP LY +YH I + + H+ D+ G +CE D A+ R++ GD + I Sbjct: 309 NLMRPALYGSYHHITVMGKENAPKDHV-YDVTGSLCENNDKFAIQRELPKIDIGDRIIIH 367 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELI 411 GA+G YN +L E+++ IR T+ +L Sbjct: 368 DAGAHGHSMGFNYNGKLRSAELLLHKDGSVTQIRRAETYDDLF 410 >gi|332826772|gb|EGJ99589.1| diaminopimelate decarboxylase [Dysgonomonas gadei ATCC BAA-286] Length = 385 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 136/378 (35%), Positives = 208/378 (55%), Gaps = 7/378 (1%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 N ++KL ++TPFY Y +++ + YA+KAN+N+ +++ +A Sbjct: 4 GNFPVDKL-KGIETPFYYYDMDLLKRTLKIVKEETKKYGFVQHYAVKANANRRILELIAS 62 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 G G D VS E++ A+ A PA +IVF+GVGKT EI+LAL I+CFNVES EL+ + Sbjct: 63 EGFGADCVSGNEVKAAVNAGFPASKIVFAGVGKTDKEINLALDLNIFCFNVESLPELEVI 122 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 N+ A GK A +A R+NP+++A+TH+ I+TG E+KFG + + ++ +L +K+ Sbjct: 123 NELASKKGKLAQVALRINPNVDAHTHEYITTGLNENKFGFAMAHLDAVIEKLKSLKAIKL 182 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G+ HIGSQI++ E+F + + +L ++HI++GGGLGI Y + P S Sbjct: 183 IGIHFHIGSQIEEAETFEPLCERVNELQVYFEEKEIKLEHINLGGGLGIDYENPDAHPVS 242 Query: 254 S---DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 +A E GR +VA G LVT+ +K +K FVI+D M D Sbjct: 243 DFAGYFALFNKSLKLRDGQIAHFELGRSIVAQCGALVTRTTYVKHGENKVFVIVDAGMTD 302 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 +RP LY AYH I N + + D+VGPICE+ D A + ++ + GD+L + Sbjct: 303 LIRPALYQAYH---KIENISSNLTVKKYDVVGPICESSDVFAKDYELNETQRGDILVLRS 359 Query: 371 TGAYGAVQSGTYNSRLLI 388 GAYG + + YN R L Sbjct: 360 AGAYGEIMASQYNCRELP 377 >gi|317494190|ref|ZP_07952606.1| diaminopimelate decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917963|gb|EFV39306.1| diaminopimelate decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 465 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 105/444 (23%), Positives = 188/444 (42%), Gaps = 32/444 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F G L E V +E LA TPFY +S I +N AF +T +A K Sbjct: 23 FTSHNGKLCFEGVDVEALAKKYGTPFYVFSEPEIVRNIKEIEQAFSAHANTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S E+R+ L +IVF+GV K ++++ A+ + +Y Sbjct: 83 SVMGVLKAIKDAGICAEANSLYEVRKCLEIGFSGSQIVFNGVVKKPEDLEYAIDNELYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL +++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELDHIDEISRRLKKTANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P VK+ G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILQMPYVKLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDEENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 V K+ + ++ + + + Y + + + Sbjct: 322 DVSCEKRKTNYDLEGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRITEPHDQYIK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPHDTQIGDVVVFLDAGAYTIESQTVYNNRPRTAVVMI 441 Query: 394 NG-SQFHIIRPRMTFQELIELDSI 416 + + +IR T++++++ D Sbjct: 442 DNQGKDRLIRREDTYEDMVKYDIF 465 >gi|255010466|ref|ZP_05282592.1| diaminopimelate decarboxylase [Bacteroides fragilis 3_1_12] gi|313148271|ref|ZP_07810464.1| diaminopimelate decarboxylase [Bacteroides fragilis 3_1_12] gi|313137038|gb|EFR54398.1| diaminopimelate decarboxylase [Bacteroides fragilis 3_1_12] Length = 387 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 134/370 (36%), Positives = 196/370 (52%), Gaps = 6/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 +QTPFY Y T + + V YA+KAN+N V+ + G G D V Sbjct: 11 RELQTPFYYYDTKVLRDTLACVNREVARYDNFSVHYAVKANANSKVLTIIRESGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA +IVF+GVGK EI+L L I+CFNVES EL+ +N+ A + G Sbjct: 71 SGGEIRAAIKAGFPAGKIVFAGVGKADWEINLGLDYDIFCFNVESVPELEVINELAAAKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NP++ A+TH I+TG E+KFGI +H + + A + VK G+ HIG Sbjct: 131 KVANVAFRINPNVGAHTHANITTGLAENKFGISMHDMDKVIDVALGMKNVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS---SDYAS 258 SQI + F + +L +L + ++HI+VGGGLGI Y +R + + Sbjct: 191 SQILDMGDFIALCNRVNELQDKLEARHILVEHINVGGGLGIDYDHPNRQAIPDFADYFRT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + E GR + G L++KV+ +K+ +K F ILD M D +RP LY Sbjct: 251 YDEHLKLRPHQTLHFELGRAITGQCGSLISKVLYVKQGTNKQFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H++ + + D D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AHHKMENLT--SEDTTVETYDVVGPICESSDVFGKAVDLNKVKRGDLIALRSAGAYGEIM 368 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 369 ASGYNCRELP 378 >gi|118442987|ref|YP_878189.1| diaminopimelate decarboxylase [Clostridium novyi NT] gi|118133443|gb|ABK60487.1| diaminopimelate decarboxylase [Clostridium novyi NT] Length = 470 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 98/441 (22%), Positives = 186/441 (42%), Gaps = 30/441 (6%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F + +L E ++L +L TPFY YS I +N NAF +T + YA KA Sbjct: 30 FSKSDENLLFEGINLNELGKKYSTPFYVYSQKEILRNIDEIKNAFKNHANTKIFYASKAC 89 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S ++ + G ++ S E+R+ L ++IVF+GV K +E++ A+++ +Y Sbjct: 90 SVMKILNIVKESGICVEANSIYEVRKCLDVGFTGDQIVFNGVVKKKEELEFAIKNDLYSI 149 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL + + L K A + R+ P +++ TH + T GI + ++ Sbjct: 150 NVDSFFELDIIEEITNRLQKNANVCVRIEPSVSSPTHPGLVTAFHAKS-GIDLEDAENMC 208 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLG 241 + V++ G+ MH+G Q+ E F KA +++ + R + I+VGGG+ Sbjct: 209 KKIINMKYVRLKGLHMHVGDQVPISEPFRKATEIMVKEAARLERVLNYKFDLINVGGGIP 268 Query: 242 IAYHSDHRPPSSSDY-----------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 + Y + A + + +I +EPGR +V+ +L+T + Sbjct: 269 VPYKYERGNAQEDYLYGGINSYDFASAIISEVHKWRKDIEICIEPGRKIVSSAAVLLTSI 328 Query: 291 IS---------IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 D A + +L+ ++ + ++ + Sbjct: 329 SCEKTKTNYDENNNIQDVVDWKFIDAGYSILSDSLHFDWYFYLLNASKTNEKYESLFKVA 388 Query: 342 GPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 GP+C+ GD+ + GD+L GAY YN+R +++N Sbjct: 389 GPLCDGGDYFHQGVVGEFFALPNNTEVGDVLAFLDAGAYTIESQTVYNNRPRTAVVLINN 448 Query: 396 -SQFHIIRPRMTFQELIELDS 415 + +IR +++++++ D Sbjct: 449 EGKDELIRREDSYEDMLKCDI 469 >gi|320094245|ref|ZP_08026047.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978823|gb|EFW10364.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 178 str. F0338] Length = 473 Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 106/432 (24%), Positives = 177/432 (40%), Gaps = 26/432 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--------MDTMVCYAL 59 +G+L V + LA + TP + + + +A YA Sbjct: 38 DGALEVGGVEMADLAGRLGTPLFVVDLADLAARARVWVSAMAEEFWDGYGMAGGDAFYAS 97 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA + V + +A G G+D S GEL AL A V RI G K EI+LALQ+GI Sbjct: 98 KAFLSAEVARLVAAEGMGIDTASLGELTLALRAGVDPGRIGLHGNNKGDAEIELALQAGI 157 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQ 177 + ++S E+ + + A LG +AP+ R+ ++A ++ I+T ++ KFG+ + Q Sbjct: 158 HRIFIDSAHEVGAVERIAARLGVEAPVMVRLKSGVHAGGNEYIATAHEDQKFGVSVADGQ 217 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + P ++ G+ HIGSQI +F +A +++ D ++R Sbjct: 218 ALDVVRRIREAPHLRFLGLHSHIGSQIFGTAAFEEAARVVVDFAARIRDELGVETGAIDL 277 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL---------EPGRFLVADVGILVT 288 GG ++ P S A + L EPGR +V + + Sbjct: 278 GGGVGIAYTGQDPVPDSPAAVARALAGVVRERCESLRLPVPHVSTEPGRSVVGPAALTLY 337 Query: 289 KV-----ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 V +S+ + +V +D M+D +RP LY A + + +VG Sbjct: 338 TVGVVKDVSLPGGGVRRYVAVDGGMSDNIRPALYGASYTAALAGREGAEG-LARCRVVGK 396 Query: 344 ICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIR 402 CE+GD + + + GD++ + TGAYG + YN + V + H + Sbjct: 397 HCESGDIVVRDVDLPADVGAGDVIAVPATGAYGYSMASNYNMLTKPGVVGVGAGEPHWLV 456 Query: 403 PRMTFQELIELD 414 L+ LD Sbjct: 457 RPQGLDHLLALD 468 >gi|303228963|ref|ZP_07315773.1| putative diaminopimelate decarboxylase [Veillonella atypica ACS-134-V-Col7a] gi|302516377|gb|EFL58309.1| putative diaminopimelate decarboxylase [Veillonella atypica ACS-134-V-Col7a] Length = 418 Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 95/403 (23%), Positives = 158/403 (39%), Gaps = 14/403 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE + TPF+ Y I N F +AF +A+KA N +++ L LG Sbjct: 13 LEAIIANYPTPFHIYDEEGIVNNMKRFISAFSWNKGFKQYFAVKATPNPYIMRVLQKLGV 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+F+ E AL G N++ + ++ L + Sbjct: 73 GADCSSLAELLLCEKVGITGHDIMFTSNDTPYVEYKKALDMGAI-INLDDITHIEYLEKH 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 SL + + P I +E K+G+ Q+ Y Sbjct: 132 HGSLPDTFCVRYNPGPLKEGG--NTIIGLPEEAKYGMTREQVFEAYKQLQAKGVKHFGLH 189 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + +++D A + G +++ ID+GGG+G+AY + P Sbjct: 190 TMVVSNELDIDGLVGTAEICFNLAVEIKEKLGIDVEFIDLGGGVGVAYKPEQTPVDFEKL 249 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ + + + E GR + G LV+ I K + ++ LD M Sbjct: 250 GERVHEAYDRIIKGNGLKDIALAYECGRMVTGPFGYLVSTAIHKKDI-YRHYIGLDSCMA 308 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP LY +YH I + + H+ D+ G +CE D A+ R++ GD + I Sbjct: 309 NLMRPALYGSYHHITVMGKENAPKDHV-YDVTGSLCENNDKFAIQRELPKIDIGDRIIIH 367 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELI 411 GA+G YN +L E+++ IR T+ +L Sbjct: 368 DAGAHGHSMGFNYNGKLRSAELLLHKDGSVTQIRRAETYDDLF 410 >gi|325293061|ref|YP_004278925.1| Diaminopimelate decarboxylase [Agrobacterium sp. H13-3] gi|325060914|gb|ADY64605.1| Diaminopimelate decarboxylase [Agrobacterium sp. H13-3] Length = 440 Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 103/412 (25%), Positives = 168/412 (40%), Gaps = 19/412 (4%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F E L +++ + TP + Y +A+ + Y + A G + Y++KAN Sbjct: 33 EFAVDENDLVIGGLAVRDIVAETGTPCFLYDASAMRRAYRDLATALSGF-ADIYYSVKAN 91 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 A++ G+G +I S GE R A+ A +P E I+F+G GK E+ ++SG Sbjct: 92 PLPAIVSLFRQEGAGAEIASVGEYRAAIKAGIPPENIIFAGPGKRQAELLEVIESGTGEI 151 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ++ES E+ + KA I PD A G K FG ++ ++ Sbjct: 152 HIESAEEITRIEAI--GRPVKASIRINPVPDAQAGAM---RMGGKATAFGFDEEELENVL 206 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 + + + GV ++ G+QI + ++ L ++ GG Sbjct: 207 PLFRDIRHINLVGVHIYGGTQILDADMLVSQWRHSILLAARMAEMLGRPLETIDLGGGLG 266 Query: 243 AYHSDHRPP--------SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + P + D +L+ + II+EPGRFL GI V +V S+K Sbjct: 267 IPYFAGETPLDLAAVSAAIPDLKALVQAHPLIADAHIIVEPGRFLAGPGGIYVAEVNSVK 326 Query: 295 KSADKTFVILDVAMNDFMRPT----LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 S TFV+ D M+ + + + A IVGP+C D Sbjct: 327 TSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADYEETATIVGPLCTPLDT 386 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQFHII 401 +A N + + GDLL I ++GAYGA S + S E++V F +I Sbjct: 387 LARNAALPKLKAGDLLAILQSGAYGATASPSGFLSHPAAKEVLVENGAFEVI 438 >gi|167627334|ref|YP_001677834.1| diaminopimelate decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597335|gb|ABZ87333.1| diaminopimelate decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 394 Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 135/373 (36%), Positives = 201/373 (53%), Gaps = 7/373 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP Y Y +T ++ + + A D + + YA+KAN + ++ G G+D VS G Sbjct: 23 TPCYIYDSTLLDDTFASAKKALDKNFKNAEIHYAIKANHHPKIVNIAKKYGMGIDCVSGG 82 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E+RRAL V + IVF+GVGK EI+LA+ + I+ FN ES E++ ++Q A S K+ Sbjct: 83 EIRRALEQNVDPQNIVFAGVGKADWEIELAIDNDIFAFNSESLEEIEVISQIASSKNKQV 142 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY-ASTLPGVKISGVDMHIGSQ 203 I RVNP+I+A TH ISTG+ +DKFGI I + +KI G+ H+GSQ Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFANILNWLKNDFQNFGNIKIIGLHYHVGSQ 202 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP---SSSDYASLI 260 I + F + + L+ N +I+HI+ GGGLGI Y + H+ P + +A Sbjct: 203 ILNYQVFESLAITTNEHIKLLKQNDIDIEHINFGGGLGIDYQNPHQNPIVDFDNYFARFR 262 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + K+ E GR LV G+LV++V+ K + D F I+D M + +RP LY A Sbjct: 263 EFFEYCDDVKLHFELGRSLVGQSGVLVSQVLFNKVTQDTHFAIIDAGMTELIRPALYQAQ 322 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 H+I +++ + + H IVGPICE+ D A ++ + GDLL I GAYG V + Sbjct: 323 HKIEALIDESVN-EKQHYHIVGPICESSDVFAKYYQLPKIKRGDLLVIYSAGAYGKVLAS 381 Query: 381 TYNSRLLIPEIMV 393 YN R + E + Sbjct: 382 EYNLRPTVQEYFI 394 >gi|229828510|ref|ZP_04454579.1| hypothetical protein GCWU000342_00573 [Shuttleworthia satelles DSM 14600] gi|229793104|gb|EEP29218.1| hypothetical protein GCWU000342_00573 [Shuttleworthia satelles DSM 14600] Length = 427 Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 100/403 (24%), Positives = 152/403 (37%), Gaps = 14/403 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGSG 77 E++A TPF+ Y I + AF +A+KA N +IK L G G Sbjct: 13 EEIAARYPTPFHVYDEKGIRQKARDVREAFAWNPGFREYFAVKATPNPFLIKILQEYGCG 72 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D S EL + A + I+F+ +E A Q G + + Sbjct: 73 TDCSSLSELMLSDAIGLKGHEIMFTSNDTPAEEFRYAAQIGAIINFDDISHIDFYEREVG 132 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R NP I + K+G+ QI Y Sbjct: 133 PLPD---TVCCRYNPGGIYELANGIMDNPGDSKYGMTHAQIIEAYRILKEKRVKHFGIHA 189 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + A L + + + G I++ GG+GI Y D P Sbjct: 190 FLCSNTVTNDYYPTLARTLFTLVAEISKELGIRFDFINLSGGVGIPYSPDQTPNDIMAIG 249 Query: 258 SLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 +H+ + Q I E GRF++ G LVT+ I K + K ++ +D + Sbjct: 250 QGVHRVYDEVLVPAGMDQIAIYTEMGRFMMGPHGGLVTRAIHAKHT-YKNYIGVDACAAN 308 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP +Y AYH I + L D+ G +CE D A++RK+ GDLL+I Sbjct: 309 LMRPAMYGAYHHITVLGK-EDAPLTEVYDVTGALCENNDKFAIDRKLPAIENGDLLFIHD 367 Query: 371 TGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN+RL EI++ F +IR T ++ Sbjct: 368 TGAHGFSMGYNYNARLWSSEILLKEDGSFELIRRAQTPRDYFA 410 >gi|220929910|ref|YP_002506819.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulolyticum H10] gi|220000238|gb|ACL76839.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulolyticum H10] Length = 416 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 104/415 (25%), Positives = 186/415 (44%), Gaps = 18/415 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L + + TP Y Y T I Y N+ + + Y++KAN + + LGSG Sbjct: 6 LNDIVNKYGTPVYAYDTEKIMSQYALLKNSLPQ-EIGIFYSMKANPLLGICQLFKKLGSG 64 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 ++ S GEL AL A P E+I+F+ GKT DE+ A+++GIY N+ES E + +N+ A Sbjct: 65 IETASSGELHTALCAGFPPEKIIFTSPGKTYDELKYAVETGIYSINIESLEEAEVINEIA 124 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G+ I+ R+NPD + +G +FGI ++ S+ L + I G+ Sbjct: 125 DKKGRVVDISIRINPDFDIAGSGIKMSGVAS-QFGIDQIRLDSVLNELKALQNLNIMGIH 183 Query: 198 MHIGSQIDQIESFHK-AFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 ++ G+Q S + ++++ ++ +++GGG G+ Y D Sbjct: 184 IYTGTQALNAHSIVQSMEQIVKLALDTSEKYVFKLKFLNLGGGFGVPYFKDDSTLDMDIL 243 Query: 257 A-----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ +E GRFL+A+ G +TK++ K+ + +++ D N Sbjct: 244 RNEFSEMWNKYKDRLFNTQVFVESGRFLMAESGTYLTKILYRKECKGRKYLVCDGGSNQH 303 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIH-ADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + N+ + + ++VGP+C D I N + PGD++ + K Sbjct: 304 AASAFLGRHIRNNFPIQILNKSSNEEQVNVVGPLCTPTDVIGQNVMLPEAVPGDIVAVLK 363 Query: 371 TGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQKTP 424 +GAYG QS + S L E+ + +I+R R ++ + L++ P Sbjct: 364 SGAYGVTQSPGLFLSHPLPAEVQYYEGKTYILRERWGKEDFM--------LRQKP 410 >gi|311113374|ref|YP_003984596.1| diaminopimelate decarboxylase [Rothia dentocariosa ATCC 17931] gi|310944868|gb|ADP41162.1| diaminopimelate decarboxylase [Rothia dentocariosa ATCC 17931] Length = 504 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 116/475 (24%), Positives = 182/475 (38%), Gaps = 62/475 (13%) Query: 2 SAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYL----TFSNAFDGMDTMV- 55 +F+ G L + ++ +L TP Y +S F +AF V Sbjct: 29 DSFQRNHGGELTIDGIAASELVKEFDTPQYVFSEDTFRARARGYRQAFKDAFARYGAQVS 88 Query: 56 -CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 YA K+ +V + G LD S GEL AL A VP + I G K+ EI A Sbjct: 89 VYYAGKSFLCTSVARWAHEEGLCLDTASGGELAIALRAQVPGQNIALHGNNKSHGEIVRA 148 Query: 115 LQSGIYCFNVESESELKTLNQRA-----------VSLGKKAPIAFRVNPDINANTHKKIS 163 ++ G+ +S ELK + P+ R+ P ++A+TH+ I+ Sbjct: 149 IKHGVGRVVADSVDELKLIADVHAELNAERAAAGQEPYPAVPVLIRITPGVHASTHESIA 208 Query: 164 TGKKEDKFGIPIHQIHSLYA--YASTLPGV----------------------KISGVDMH 199 T ++ KFG+ + + A A L + G+ H Sbjct: 209 TAHEDQKFGMSLQPGTARLAGLEADELEYWSTTEDESYAMLAAGILTATDSLEFRGIHCH 268 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 IGSQI + + F +A + ++ +D+GGG GI Y P S Sbjct: 269 IGSQIFEAQGFEQAADTALTFMHAVNQKYGLSLPELDLGGGYGIGYTEADTPRSIEQITV 328 Query: 259 LIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVIS---------IKKSADKTFV 302 I + EPGR + G+ + V + + + +V Sbjct: 329 SIADAVAATCVRLGLAIPHMSFEPGRSISGPSGVTLYTVGTIKNVSIEDEHGQIRVRRYV 388 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPR 361 +D M+D RP LYDA + + N A H+ + +VG CE+GD + + R Sbjct: 389 SVDGGMSDNARPVLYDADY-AVTLANRAPAGEHVLSRVVGKHCESGDIVVRYCYLPADLR 447 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ-FHIIRPRMTFQELIELDS 415 GD+L + TGAY V YN P I + + H I R + E++ LD+ Sbjct: 448 AGDILAVPATGAYCYVLGSNYNYLSRPPVIATSAGEAAHPIIRRQSEDEMLALDT 502 >gi|332297300|ref|YP_004439222.1| Diaminopimelate decarboxylase [Treponema brennaborense DSM 12168] gi|332180403|gb|AEE16091.1| Diaminopimelate decarboxylase [Treponema brennaborense DSM 12168] Length = 422 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 153/404 (37%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLGS 76 LE A TPFY Y AI +N F+ AF +A+KA N ++K LA G+ Sbjct: 13 LEAAARRFGTPFYIYDERAIRENMRRFTKAFGIFPSFKEYFAVKACPNPYILKILASEGA 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A A + E ++F+ E A G + Sbjct: 73 GADCSSLPELILAEKAGMSGENVMFTSNETPEKEYIYANLKGNVINLDDISHIAYLEKAL 132 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + +E K+G+ QI Y + Sbjct: 133 GALPE----LLCFRYNPGPLKEGNALIGKPEEAKYGLTREQIFEAYRVCKNKGVKRFGLH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M ++++ A L + R G I+ +D+GGG+GI Y + Sbjct: 189 TMVASNELNPDYFVETAELLFTLAAELKRKEGVRIEFVDLGGGIGIPYRPGQKAVDYEYV 248 Query: 257 ASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 A I + + + E GR + G LVT+ + K + +V +D +M Sbjct: 249 AQRIRAAYDEIIVPAGLDPLAVAWECGRPITGPYGWLVTRALHEKHI-YRDYVGVDASMA 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 D MRP +Y AYHE+ R + D+VG +CE D A+ R++ PGDLL I Sbjct: 308 DLMRPGMYGAYHEVTVSGKENAARDRV-YDVVGSLCENCDKFAVQRELPEIVPGDLLIIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 GA+G YN++L E+++ IR T + Sbjct: 367 DAGAHGRAMGFNYNAKLRCGELLLRTDGSIVQIRRNETVDDYFA 410 >gi|332883591|gb|EGK03872.1| diaminopimelate decarboxylase [Dysgonomonas mossii DSM 22836] Length = 385 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 137/378 (36%), Positives = 204/378 (53%), Gaps = 7/378 (1%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 N ++KL ++TPFY Y T +++ + YA+KAN+N+ +++ +A Sbjct: 4 GNFPVDKL-KGIETPFYYYDTDLLKRTLKIVKEETKKYGFIQHYAIKANANRRILELIAS 62 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 G G D VS E++ A+ A PA +IVF+GVGKT EI+LAL I+CFNVES EL L Sbjct: 63 EGFGADCVSGNEVKAAITAGFPASKIVFAGVGKTDKEINLALDLNIFCFNVESMPELVVL 122 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 N+ A GK A +A R+NP+++A+TH+ I+TG E+KFG + + + +L +K+ Sbjct: 123 NELAAKKGKTAQVALRINPNVDAHTHEYITTGLNENKFGFSMAHLDNAIEVLKSLKNLKL 182 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP-- 251 G+ HIGSQI+ + +F + +L + G +++I+VGGG GI Y P Sbjct: 183 IGIHFHIGSQIEDVHTFDPLCDRINELQDLFEAKGMKLENINVGGGFGIDYEDPDANPIS 242 Query: 252 -SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + + E GR +VA G LVTKV +K KTFVI+D M D Sbjct: 243 DFQRYFELFHKGLKLRDGQVVHFELGRAIVAQCGSLVTKVTYVKHGESKTFVIVDAGMTD 302 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 +RP LY AYH + N + D D+VGPICE+ D + ++ + GDLL + Sbjct: 303 LIRPALYQAYH---KVENISSDLPIQKYDVVGPICESSDVFVKDYELNESKRGDLLVLRS 359 Query: 371 TGAYGAVQSGTYNSRLLI 388 GAYG + + YN R + Sbjct: 360 AGAYGEIMASQYNCRDIP 377 >gi|168186354|ref|ZP_02620989.1| diaminopimelate decarboxylase [Clostridium botulinum C str. Eklund] gi|169295706|gb|EDS77839.1| diaminopimelate decarboxylase [Clostridium botulinum C str. Eklund] Length = 469 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 101/441 (22%), Positives = 182/441 (41%), Gaps = 30/441 (6%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F +L E V+L +L TPFY YS I +N AF +T + YA KA Sbjct: 29 FSKSNENLMFEGVNLNELGKKYITPFYVYSEKEILRNIDEIKKAFKNHSNTKIFYASKAC 88 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S ++K + G ++ S E+++ L E+IVF+GV K E++ A+++ +Y Sbjct: 89 SVMKILKIVKESGICVEANSIYEVKKCLEIGFKGEQIVFNGVVKKKYELEFAIRNDLYLI 148 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL + + L K A + R+ P++++ TH + T GI + + Sbjct: 149 NVDSFFELNIIEEITNRLKKNANVCVRIEPNVSSPTHPGLITAFHAKS-GIDLEDAEKMC 207 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLG 241 + VK+ G+ MH+G Q+ E F KA +++ + R I+VGGG+ Sbjct: 208 GRIINMKYVKLKGLHMHVGDQVPTSEPFRKATEVMVKEAARLERVLNFKFDLINVGGGIP 267 Query: 242 IAYHSDHRPPSSSDY-----------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 + Y + A + + +I +EPGR +V+ +L+T V Sbjct: 268 VPYKYEKENAQEDYLYGGINSYDFASAIINEIHKWRKDIEICIEPGRKVVSSSAVLLTSV 327 Query: 291 IS---------IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 D A + +L+ ++ + + + Sbjct: 328 SCEKTKTNYDENNNIQDLVDWKFVDAGYSILSDSLHFDWYFYLLNASKTNLEYNNWFKVA 387 Query: 342 GPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 GP+C+ GD+ + GD+L GAY YN+R +++N Sbjct: 388 GPLCDGGDYFHQGVAGEFFALPSNTEVGDILAFLDAGAYTIESQTVYNNRPRTAVVLINK 447 Query: 396 -SQFHIIRPRMTFQELIELDS 415 + +IR +++++++ D Sbjct: 448 EGKDELIRREDSYEDMVKYDI 468 >gi|32475756|ref|NP_868750.1| diaminopimelate decarboxylase [Rhodopirellula baltica SH 1] gi|32446299|emb|CAD76127.1| diaminopimelate decarboxylase [Rhodopirellula baltica SH 1] Length = 427 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 102/403 (25%), Positives = 171/403 (42%), Gaps = 16/403 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 ++++ TPF Y I ++AF +A+KA N ++ +A G Sbjct: 13 IDRIIEDHPTPFVLYHEDGIRARARELTDAFAWNEGFQQYFAVKATPNPHIVAMMAEEGG 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + + ++F+ T++E ++A + G ++Q Sbjct: 73 GADCSSVAELITCERLGITGQDVMFTSNNTTMEEFEIANKLGAIINLDTPHH----IDQI 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A ++FR NP I KE KFG Q+ Y + L + Sbjct: 129 AQLSPLPEMVSFRFNPGPERQG-NVIIGDPKEAKFGSTREQLMDGYRRCAELGISRFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + ++++ A L + R G +++ I++GGG+G+ Y P + Sbjct: 188 AMVVSNELNIEALLQTAEMLFELAAEIHRETGISVECINLGGGIGVPYQPGQEPVDLPAF 247 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + ++ +I++E GR + G L+TKVI +KS+ K +V +D M+ Sbjct: 248 GDGVRKLYESILVPAGIAPVRILMENGRAMTGPFGYLITKVI-NQKSSYKDYVGVDACMS 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + DIVG +CE D A++RK+ GD+ I Sbjct: 307 NLMRPGMYGAYHHITVMGKEDQPADR-TVDIVGSLCENNDKFAIDRKMPATEVGDIAVIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNG-SQFHIIRPRMTFQELI 411 GA+G YN RL EI+ N +F IR TF + Sbjct: 366 DAGAHGHSMGFQYNGRLRSAEIVFNDAGEFRAIRRAETFDDYF 408 >gi|33519728|ref|NP_878560.1| diaminopimelate decarboxylase [Candidatus Blochmannia floridanus] gi|33504073|emb|CAD83334.1| diaminopimelate decarboxylase [Candidatus Blochmannia floridanus] Length = 425 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 117/433 (27%), Positives = 196/433 (45%), Gaps = 30/433 (6%) Query: 1 MSAFKYFEGSLHAENVS-LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M LH N + L++L + P + Y + I FD ++ +A Sbjct: 1 MHQ-HVINELLHISNYNKLKELHQKYRGPVWAYDASIIINRINQLKQ-FD----VIRFAQ 54 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K+ SN ++K + + G +D VS GE+ RAL A ++ S + T D + I Sbjct: 55 KSCSNIHILKLMNNNGVKIDAVSLGEIERALLAGFKSDNED-SEIVFTADIFENDTLLKI 113 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 + + + S + I R+NP + K +TG + K GI I Sbjct: 114 VELGIPVNIGSIDMLIQLGSCSPRHKIWLRINPGFGYGHNYKTNTGGENSKHGIWHEDIP 173 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + Y +++ G MH+GS + + K+ + QQ+ ++Q I GGG Sbjct: 174 TALFYIRYY-NLRLIGFHMHVGSGVH----YDHLLKVSYAMVQQVFKYTEDLQAISAGGG 228 Query: 240 LGIAYHSDHRPPSSSDYASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISI 293 L + Y S +P ++Y ++ ++ + ++ +EPGRFLVA+ GIL+T++ ++ Sbjct: 229 LTVPYESHEKPVDVNNYFNIWNKARQEISQCLGHKIQLEIEPGRFLVAESGILITQICAV 288 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDF 350 K+ + FV++D ND MRP +Y +YH I+ I + I GP+CE+GD Sbjct: 289 KRMGRRNFVLIDAGYNDLMRPVMYGSYHHISLIPGDNRNIMFDKLNDIIIGGPLCESGDI 348 Query: 351 IALN-------RKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIR 402 N RK+ + GD L TGAYGA S YN+R L+PE++ + IR Sbjct: 349 FTQNSYGEVLPRKLPDSLKIGDYLIFHDTGAYGASMSSNYNTRPLLPEVLWENGEIRQIR 408 Query: 403 PRMTFQELIELDS 415 + ++L L+ Sbjct: 409 RKQRLEDLFSLEI 421 >gi|313205431|ref|YP_004044088.1| diaminopimelate decarboxylase [Paludibacter propionicigenes WB4] gi|312444747|gb|ADQ81103.1| diaminopimelate decarboxylase [Paludibacter propionicigenes WB4] Length = 387 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 134/368 (36%), Positives = 199/368 (54%), Gaps = 6/368 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 ++TPFY Y + K + D V YA+KAN N +V+ + G G D VS Sbjct: 13 KIETPFYYYDLEVLRKTLEEINIQSKKSDFHVHYAMKANVNPSVLAAIKDAGLGADCVSG 72 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GE++ A+ A + ++VF+GVGK EI+L L + I+CFNVES EL+ +N+ A + K Sbjct: 73 GEVQAAIDAGISPSKVVFAGVGKADWEINLGLDNDIFCFNVESIPELEVINELAAAKNKV 132 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 A +A R+NP+++A+TH I+TG E+KFGI + ++ + TL VK+ G+ HIGSQ Sbjct: 133 AKVALRINPNVSAHTHHYITTGLSENKFGINMSELDQVVDLFPTLSNVKLIGIHFHIGSQ 192 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---DYASLI 260 I + SF + +L + +S ++HI+VGGGLGI Y + P + Sbjct: 193 ITDLTSFQGLCVRVNELQEYFQSRNVVLEHINVGGGLGINYEHPNHFPIPDFDAYFKVFR 252 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + E GR +VA G L++KV+ +K+ + K F ILD D +RP LY AY Sbjct: 253 DHLQLLPNQTLHFELGRAVVAQCGSLISKVLYVKQGSSKKFAILDAGFTDLIRPALYQAY 312 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 H I N + D D+VGPICE+ D A ++ + GDL+ + GAYG + + Sbjct: 313 HHIE---NLSSDLAVEPYDVVGPICESSDTFAKGFELNQTKRGDLIALRSAGAYGEIMAS 369 Query: 381 TYNSRLLI 388 YN R L Sbjct: 370 QYNLRKLP 377 >gi|302346264|ref|YP_003814562.1| diaminopimelate decarboxylase [Prevotella melaninogenica ATCC 25845] gi|302150973|gb|ADK97234.1| diaminopimelate decarboxylase [Prevotella melaninogenica ATCC 25845] Length = 385 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 130/370 (35%), Positives = 197/370 (53%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y + + + + +V YA+KAN+N V+ + G G D V Sbjct: 11 KKIETPFYYYDCDLLRETLQAINKELKKYENFIVHYAIKANANAKVLNVIQQTGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE++R L PA++IV++GVGK+ EI+L L I+CFNVES +EL+ +N+ A G Sbjct: 71 SGGEIQRCLDCGFPADKIVYAGVGKSDWEINLGLDHDIFCFNVESVAELEVINELAAKKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A + FR+NPD+ A+TH+KI+TG E+KFGI + + AS + + G+ HIG Sbjct: 131 KTANVCFRINPDVGAHTHEKITTGLAENKFGIAMQDMLPTILEASRMSNIHFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---DYAS 258 SQ+ ++ F + ++ L I++I+VGGGLGI Y + P + + Sbjct: 191 SQLLEMTDFRHLCSRINEIQDGLEQENIKIKNINVGGGLGIDYDNPDNHPIPDFKSYFYT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 K+ E GR +V +G L+T+ + +K+ K F I+D M D +RP LY Sbjct: 251 FARYLKLREGQKLHFELGRAVVGQMGSLITRTLYVKQGTAKQFAIVDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A H I N + D D+VGPICE+ D A ++ GDL+ + GAYG + Sbjct: 311 ASH---KIENLSNDGALHAYDVVGPICESSDVFAKEIELNTVHRGDLIAMRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASQYNCRKLP 377 >gi|237712075|ref|ZP_04542556.1| diaminopimelate decarboxylase [Bacteroides sp. 9_1_42FAA] gi|229453396|gb|EEO59117.1| diaminopimelate decarboxylase [Bacteroides sp. 9_1_42FAA] Length = 386 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 137/370 (37%), Positives = 196/370 (52%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y + + A + V YA+KAN+N V+ + G G D V Sbjct: 11 RELETPFYYYDVNVLRETLSCINKEAGKYNNFCVHYAVKANANHKVLTIIRESGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A P +IV++GVGKT EI+L L I+CFNVES EL+ +N+ A + G Sbjct: 71 SGGEIRAAIKAGFPTNKIVYAGVGKTDWEINLGLDYDIFCFNVESVPELEIINELASAKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NP++ A+TH I+TG E+KFGI + + + A TLP VK G+ HIG Sbjct: 131 KTARVAFRINPNVGAHTHANITTGLAENKFGISMEDMDKVIDMAGTLPHVKFVGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSSDYAS 258 SQI + F + +L ++L + ++HI+VGGG + P + +A+ Sbjct: 191 SQILDMGDFVALCNRVNELQEKLCARQIIVEHINVGGGLGIDYAHPNRQAIPNFTEYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L++KVI +K+ A+K F ILD M D +RP LY Sbjct: 251 YHKHLKLRPQQTLHFELGRAVVGQCGSLISKVIYVKQGANKQFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH I N + D+VGPICE+ D + GDL + GAYG + Sbjct: 311 AYH---KIENITSEEPMETYDVVGPICESSDVFGKAIDLNKAHRGDLFALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASAYNCRALP 377 >gi|197119232|ref|YP_002139659.1| ornithine/diaminopimelate/arginine decarboxylase-like protein TabA [Geobacter bemidjiensis Bem] gi|197088592|gb|ACH39863.1| ornithine/diaminopimelate/arginine decarboxylase-related protein TabA [Geobacter bemidjiensis Bem] Length = 421 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 93/404 (23%), Positives = 165/404 (40%), Gaps = 17/404 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLG 75 + ++ QTPF+ Y + I + AF G +A+KA N+ ++K + +G Sbjct: 14 RIPQIQQHFQTPFHIYDESGIRETGAQLVKAFSGIPGFREFFAVKALPNREILKLMKEMG 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G D S E+ A E I+F+ + +E D A Q G N++ S ++ + Sbjct: 74 FGFDCSSIPEVILARELGARPEDIMFTSNNTSQEEFDFATQDGGCIMNLDDISLIEKVPH 133 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + R T I +E K+G+ Q+ Y A + Sbjct: 134 FPEMICFRYNPGPRR-------TGNVIIGNPEEAKYGVSHEQVVEAYRQAKERGATRFGL 186 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 M +++D A +L + + G + +++GGG GI Y + + + Sbjct: 187 HTMVASNELDYTYIVETARMVLEVAEEVEAALGIKFEFVNIGGGFGIPYRPEQKTLDLAR 246 Query: 256 YASLIHQYF------GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 ++ + + F + +E GRF+ G + K + ++ +D M+ Sbjct: 247 MSAEVTELFDGFRKRHGHAPAMFMESGRFMTGPHG-ALVTTAINSKDTYRRYIGVDACMS 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 MRP LY AYH I+ + D D+VG +CE D A+ R++ GD+L I Sbjct: 306 ALMRPALYGAYHHIDVLGKDR-DPKTEIYDVVGSLCENNDKFAVQRELQPIEDGDILVIH 364 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 +GA+G YN RL E+M+ + +IR T ++ Sbjct: 365 DSGAHGHAMGFQYNGRLRPKELMLRADGRVELIRRAETVEDYFA 408 >gi|304438258|ref|ZP_07398199.1| diaminopimelate decarboxylase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368624|gb|EFM22308.1| diaminopimelate decarboxylase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 431 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 90/402 (22%), Positives = 152/402 (37%), Gaps = 16/402 (3%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLGSGL 78 +L TPF+ Y I N+ F +A+KA N +++ L G+G Sbjct: 27 RLIERYPTPFHLYDEAKIRANFRRLRETFAWAPSFREHFAVKALPNPRIVQILHEDGAGT 86 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S EL + AA V E I+ + +E A++ G + Sbjct: 87 DCSSTPELIISAAAGVKGEEIMLTSNDTPYEEFQKAIELGAVINLDDLS-----HLDYMA 141 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + N I E K+G+ Q+ Y A + + M Sbjct: 142 KHAGLPNLLCFRYNPGNLVEGNDIIGKPVEAKYGLTREQMFEGYRRALEMGVKRFGVHTM 201 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 I +++ A + + G +++ +++GGG GI Y + + Sbjct: 202 VISAELRTEAFLLTARLMFELAAELKEKLGIHVEFVNLGGGFGIPYRPEQDGIDYDAVGA 261 Query: 259 LIHQYFGNLQCK-------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 I + + + I E R + D G LV+ V+ K + K ++ LD M + Sbjct: 262 GIERLYNEIMRPAGLGDVGIRTESARGITGDAGWLVSTVLHEKDT-YKKYIGLDSCMANL 320 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 MRP +Y AYH I + H+ D+ G +CE D A++R + GD+L I T Sbjct: 321 MRPAIYGAYHHITVLGKENAPADHV-YDVTGSLCENNDKFAIDRALPKIDIGDILIIHDT 379 Query: 372 GAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 GA+G+ YN++L E++ +IR T + Sbjct: 380 GAHGSAMGFNYNAKLHCAELLRRMDGSIELIRRPQTIDDYFA 421 >gi|150006338|ref|YP_001301082.1| diaminopimelate decarboxylase [Bacteroides vulgatus ATCC 8482] gi|254881754|ref|ZP_05254464.1| diaminopimelate decarboxylase [Bacteroides sp. 4_3_47FAA] gi|294776142|ref|ZP_06741633.1| diaminopimelate decarboxylase [Bacteroides vulgatus PC510] gi|319643721|ref|ZP_07998337.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_40A] gi|149934762|gb|ABR41460.1| diaminopimelate decarboxylase [Bacteroides vulgatus ATCC 8482] gi|254834547|gb|EET14856.1| diaminopimelate decarboxylase [Bacteroides sp. 4_3_47FAA] gi|294450016|gb|EFG18525.1| diaminopimelate decarboxylase [Bacteroides vulgatus PC510] gi|317384663|gb|EFV65626.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_40A] Length = 386 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 136/370 (36%), Positives = 195/370 (52%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y + + A + V YA+KAN+N V+ + G G D V Sbjct: 11 RELETPFYYYDVNVLRETLSCINKEAGKYNNFCVHYAVKANANHKVLTIIRESGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A P +IV++GVGKT EI+L L I+CFNVES EL+ +N+ A + G Sbjct: 71 SGGEIRAAIKAGFPTNKIVYAGVGKTDWEINLGLDYDIFCFNVESVPELEIINELAAAKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NP++ A+TH I+TG E+KFGI + + + A TLP VK G+ HIG Sbjct: 131 KTARVAFRINPNVGAHTHANITTGLAENKFGISMEDMDKVIDMAGTLPHVKFVGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSSDYAS 258 SQI + F + +L ++L + ++HI+VGGG + P + +A+ Sbjct: 191 SQILDMGDFVALCNRVNELQEKLYARQIIVEHINVGGGLGIDYAHPNRQAIPNFTEYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L++KVI +K+ +K F ILD M D +RP LY Sbjct: 251 YHKHLKLRPQQTLHFELGRAVVGQCGSLISKVIYVKQGTNKQFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH I N + D+VGPICE+ D + GDL + GAYG + Sbjct: 311 AYH---KIENITSEEPMETYDVVGPICESSDVFGKAIDLNKAHRGDLFALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASAYNCRALP 377 >gi|212691487|ref|ZP_03299615.1| hypothetical protein BACDOR_00979 [Bacteroides dorei DSM 17855] gi|237726231|ref|ZP_04556712.1| diaminopimelate decarboxylase [Bacteroides sp. D4] gi|265751775|ref|ZP_06087568.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_33FAA] gi|212665967|gb|EEB26539.1| hypothetical protein BACDOR_00979 [Bacteroides dorei DSM 17855] gi|229434757|gb|EEO44834.1| diaminopimelate decarboxylase [Bacteroides dorei 5_1_36/D4] gi|263236567|gb|EEZ22037.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_33FAA] Length = 386 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 137/370 (37%), Positives = 196/370 (52%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y + + A + V YA+KAN+N V+ + G G D V Sbjct: 11 RELETPFYYYDVNVLRETLSCINKEAGKYNNFCVHYAVKANANHKVLTIIRESGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A P +IV++GVGKT EI+L L I+CFNVES EL+ +N+ A + G Sbjct: 71 SGGEIRAAIKAGFPTNKIVYAGVGKTDWEINLGLDYDIFCFNVESVPELEIINELASAKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NP++ A+TH I+TG E+KFGI + + + A TLP VK G+ HIG Sbjct: 131 KTARVAFRINPNVGAHTHANITTGLAENKFGISMEDMDKVIDMAGTLPHVKFVGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSSDYAS 258 SQI + F + +L ++L + ++HI+VGGG + P + +A+ Sbjct: 191 SQILDMGDFVALCNRVNELQEKLYARQIIVEHINVGGGLGIDYAHPNRQAIPNFTEYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L++KVI +K+ A+K F ILD M D +RP LY Sbjct: 251 YHKHLKLRPQQTLHFELGRAVVGQCGSLISKVIYVKQGANKQFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 AYH I N + D+VGPICE+ D + GDL + GAYG + Sbjct: 311 AYH---KIENITSEEPMETYDVVGPICESSDVFGKAIDLNKAHRGDLFALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASAYNCRALP 377 >gi|149197863|ref|ZP_01874912.1| diaminopimelate decarboxylase [Lentisphaera araneosa HTCC2155] gi|149139084|gb|EDM27488.1| diaminopimelate decarboxylase [Lentisphaera araneosa HTCC2155] Length = 418 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 111/437 (25%), Positives = 187/437 (42%), Gaps = 36/437 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F + + + KL +TPFY YS IEK YA+K Sbjct: 1 MQNFTFLNKEI------ISKLNEQHRTPFYVYSQKVIEKQCQAILAIPAPFGLTARYAIK 54 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN N A++K + + G D SE E+ R L A + A++I + + + ++L ++ G+ Sbjct: 55 ANPNTAILKVIENTGFHFDASSEYEVIRCLKAGIAADKIQLTSQEMSSEHLELIIKEGVR 114 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 E + + K + I+ R+NP + + + +K + G FGI Q+ Sbjct: 115 FNACSLEQLKRYAAK----APKGSEISIRINPGLGSGSSRKTNVGGPSSSFGIWFEQVDE 170 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + +A ++I+ + HIGS + ++ LT + + +++GGG Sbjct: 171 VKRFADGCG-LRITRLHSHIGSG-----ADPAVWERAASLTLAVARQLPEVTVLNLGGGF 224 Query: 241 GIAYHSDHRPPSSSDYASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 +A HSD S + + + LEPG FLVA+ G LV V I Sbjct: 225 KVARHSDEVSTSIEAVGQTVADVLKKEAEETGRKYHLELEPGTFLVANAGSLVCSVDDIT 284 Query: 295 KSA--DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + TF+ ++ M+ RP LY A+H + + I G CE+GD + Sbjct: 285 NTGDEGYTFLKINAGMDMLTRPALYAAHHPCLPLS---DSSEKVEYVITGHCCESGDLFS 341 Query: 353 -------LNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVN-GSQFHIIRP 403 R + GD + IE GAY A S YNS + E++++ Q HIIR Sbjct: 342 VSADDTLEPRSLPKTNIGDTIIIEGAGAYCASMSLKNYNSFPQVAELILDKDDQAHIIRK 401 Query: 404 RMTFQELIELDSIPAWL 420 R ++++ + +P++L Sbjct: 402 REEMEQILANEVLPSYL 418 >gi|312864719|ref|ZP_07724950.1| putative diaminopimelate decarboxylase [Streptococcus downei F0415] gi|311099846|gb|EFQ58059.1| putative diaminopimelate decarboxylase [Streptococcus downei F0415] Length = 414 Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 162/404 (40%), Gaps = 18/404 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I + + AF +A+KA N +++K L G Sbjct: 11 LDQITKEFPTPFHLYDEKGIRETARAVNQAFSWNPGFKEYFAVKATPNPSILKILQEEGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D ++ E+ A I F+ +E A + G E Sbjct: 71 GVDCATDVEVMMAKKLDFK--DISFTSNDTRAEEFVYAREVGAMINLDAYEHIAFLEE-- 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 G ++ R NP + I +E KFG+ Q+ Y + Sbjct: 127 --VAGLPETVSLRYNPGGVFSLGTDIMDHPEESKFGMTKAQLLQGYKDLKAKGVKQFGLH 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G + I++ GG+GI Y + + Sbjct: 185 AFLASNTVTNNYYPTLAGQLFELALEIREETGVELNFINLSGGIGIDYSPADKQNDIALI 244 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +H+ F + Q KI E GRF++A G LVTKV+ +K + + +V +D + Sbjct: 245 GQGVHEKFDQILVPNGLGQIKIFTELGRFMLAPHGHLVTKVLHLKDT-YRHYVGVDASAV 303 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + +RP +YDAYH I I N D D+ G +CE D A NR+++ PR GD L I Sbjct: 304 NLLRPAMYDAYHHITNISN--PDGPIQVVDVTGSLCENNDKFAKNRELSEPRVGDTLVIH 361 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN+RL E+++ +IR + Sbjct: 362 DTGAHGFSMGYQYNARLRSAEVLLQEDGSAKLIRRAEKPGDYFA 405 >gi|300773320|ref|ZP_07083189.1| diaminopimelate decarboxylase [Sphingobacterium spiritivorum ATCC 33861] gi|300759491|gb|EFK56318.1| diaminopimelate decarboxylase [Sphingobacterium spiritivorum ATCC 33861] Length = 386 Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 130/374 (34%), Positives = 195/374 (52%), Gaps = 7/374 (1%) Query: 17 SLEKLA--HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 S ++LA +TPFY Y + +E+ S A + V YALKAN N +++ + Sbjct: 3 STKQLASFEHQETPFYYYDMSLLERTLDACSAAAEKRGFHVHYALKANFNDRILQLIQAK 62 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G G D VS E+++++ A++I F+GVGK+ EI AL I+ FNVES E++ +N Sbjct: 63 GFGADCVSGNEVKKSIETGFKADKITFAGVGKSDKEIRYALAHEIFAFNVESIEEMEVIN 122 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 A G+ A ++ R+NP+++A TH I+TG E+KFGIP ++ A + + Sbjct: 123 ALAGETGQIANVSLRINPNVDAQTHHYITTGLDENKFGIPNSELEKSAAILRESKHLNLV 182 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+ HIGSQI + F + + G I+ ++VGGGLG+ Y P + Sbjct: 183 GLHFHIGSQIVDLNVFKSLCVKVNEWKNWFEERGTTIKVLNVGGGLGVDYKDPDGNPVTD 242 Query: 255 ---DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + N ++ E GR LVA G L+++V+ K K F+ILD M + Sbjct: 243 FEAYFDIFDRFLERNSHQEVHFELGRALVAQCGSLLSRVLYTKSGIKKNFLILDAGMTEL 302 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 MRP LY AYH+I + D+ I+ D+VGPICE+ D + + + GDL+ I Sbjct: 303 MRPALYQAYHKIERVGE--SDQEEINYDVVGPICESSDCFGKEVPLPVSKRGDLIAIRTA 360 Query: 372 GAYGAVQSGTYNSR 385 GAYG V S YN R Sbjct: 361 GAYGEVMSSHYNLR 374 >gi|188582859|ref|YP_001926304.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001] gi|179346357|gb|ACB81769.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001] Length = 429 Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 163/410 (39%), Gaps = 15/410 (3%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G L + L LA TP + Y + + Y A V +++KA+ N AV Sbjct: 21 GGVLQVGGLPLTDLAETFGTPLFVYDAATMRRTYRALCAAVASF-AEVDFSVKASPNPAV 79 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 I+ G+G +I S E AL A V E+I+F+G GK ++D + I ++E+ Sbjct: 80 IRVFREEGAGAEIASGAEFEAALKAGVAPEKILFAGPGKGAADLDRVVAGNIGEIHLENR 139 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ + A G +A R+NP A GK FG ++ + Sbjct: 140 EEMVRVAAAAERHGVTVRVALRINPGATAQGGAMRMGGKPS-PFGFDEEEMETAIDAVEA 198 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 +P +++ G+ + G+Q + E+ + L ++ GG + Sbjct: 199 MPRLRLVGLHLFAGTQGLKAETLLGQWAYGLGLAARIAQRTGRALETIDLGGGLGIPYFS 258 Query: 248 H--------RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 D + + +++LEPGR+L G+ V +V+++K S Sbjct: 259 GEAALDLGAIRAGLPDLIATLRADPRLAGARVVLEPGRYLAGSAGLYVARVLAVKDSRGS 318 Query: 300 TFVILDVAMNDFMRPT----LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 FVI D M+ + + V + +VGP+C D +A Sbjct: 319 RFVITDGGMHHHLAASGNLGQIVKRDFPLAAVVEDPEAPRAATAVVGPLCTPLDMLARAA 378 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPR 404 + GDL+ + ++GAYG S T + S E++V G + +IR R Sbjct: 379 PLPPLAEGDLVAVLQSGAYGLTASPTGFLSHPTPAEVLVEGGRAEMIRAR 428 >gi|158522146|ref|YP_001530016.1| diaminopimelate decarboxylase [Desulfococcus oleovorans Hxd3] gi|158510972|gb|ABW67939.1| Diaminopimelate decarboxylase [Desulfococcus oleovorans Hxd3] Length = 418 Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 98/403 (24%), Positives = 162/403 (40%), Gaps = 18/403 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+K+A TPF+ Y I +AF + YA+KA N ++ + +G Sbjct: 15 LDKVAAHYGTPFHIYDEAGIRGTGKALLDAFSSVPGFREYYAVKALPNPRILDIMRSMGF 74 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A A E I+F+ + +E + AL N++ S + + + Sbjct: 75 GFDCSSIPELVLARRAGAIGEEIMFTSNNTSAEEFEAALADSGCILNLDDISLIYKVPKL 134 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + T I E K+G+ QI Y + + Sbjct: 135 P-------DLVCFRYNPGERRTGNAIIGNPVEAKYGVAHDQILEAYRKVRDMGARRFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M ++ + A LL + + + +++GGGLGI+Y P Sbjct: 188 AMLASNERNHTYMVTTAEMLLDLVRDISDTLDIQFEFVNIGGGLGISYRPGEPPLDLPAM 247 Query: 257 ASLIHQYF------GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + I F ++ +E GR++ G LVT+VI+ K +T+V +D M+ Sbjct: 248 GAQISDVFERFGRERRYMPRLYIESGRYMTGPHGALVTRVINRKHI-YRTYVGVDACMSA 306 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP +Y AYH I+ D+VG +CE D A+ R++ + GDL+ I Sbjct: 307 LMRPAIYGAYHHISLPTK--SGGPVETVDVVGALCENNDKFAVQRELPVAAEGDLMVIHD 364 Query: 371 TGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN R+ E+++ +IR T ++ Sbjct: 365 TGAHGIAMGFNYNGRMRPMELLLREDGSVELIRRAETVEDYFA 407 >gi|86475640|emb|CAG77429.1| putative glutamate decarboxylase [Bacillus circulans] Length = 436 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 112/426 (26%), Positives = 181/426 (42%), Gaps = 22/426 (5%) Query: 7 FEGSLHA--ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--CYALKAN 62 G L + + L +TPFY Y IE +Y + + +LKAN Sbjct: 3 KGGDLRMNLDQAEITALTKRFETPFYLYDGDFIEAHYRQLR---SRTNPAIQFYLSLKAN 59 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 +N + K G G+++ S GEL A A AE I+FSG GK E+++A+QSGIYC Sbjct: 60 NNIHLAKLFRQWGLGVEVASAGELALARHAGFSAENIIFSGPGKKRSELEIAVQSGIYCI 119 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ES EL + + A K A +A R+NPD + + G +FG+ + ++ Sbjct: 120 IAESVEELFYIEELAEKENKTARVAIRINPDKSFGSTAIKMGGVP-RQFGMDESMLDAVM 178 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD-LTQQLRSNGHNIQHIDVGGGLG 241 +L K G+ ++ G+Q +S ++ K D G + I++GGG G Sbjct: 179 DAVRSLQFTKFIGIHVYTGTQNLNTDSIIESMKYTVDLGRNIYERYGIVCECINLGGGFG 238 Query: 242 IAYHSDHRPPSSSDY------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 + Y S + + Q I+E GR+L+A + VT+V+ K Sbjct: 239 VPYFSHEKALDIGKITRTVSDYVQEARDTRFPQTTFIIESGRYLLAQAAVYVTEVLYRKA 298 Query: 296 SADKTFVILDVAMNDFM------RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 S + FVI+D M+ R + E + +G R I GP+C D Sbjct: 299 SKGEVFVIVDGGMHHHAASTFRGRSMRSNYPMEYIPVREDSGRRELEKVTIAGPLCTPED 358 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + + PGDL+ + +GAYG S + EI+ + +IR + T Sbjct: 359 CLGKDVHVPALYPGDLVCVLNSGAYGLSFSPVHFLGHPTPIEILKRNGSYELIRRKGTAD 418 Query: 409 ELIELD 414 +++ Sbjct: 419 DIVATQ 424 >gi|327540951|gb|EGF27507.1| diaminopimelate decarboxylase [Rhodopirellula baltica WH47] Length = 427 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 101/403 (25%), Positives = 172/403 (42%), Gaps = 16/403 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 ++++ TPF Y I ++AF +A+KA N ++ +A G Sbjct: 13 IDRIIEDHTTPFVLYHEDGIRARARELTDAFAWNEGFQQYFAVKATPNPHIVAMMAEEGG 72 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + + ++F+ T++E ++A + G ++Q Sbjct: 73 GADCSSVAELITCERLGITGQDVMFTSNNTTMEEFEIANKLGAIINLDTPHH----VDQI 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + ++FR NP I KE KFG Q+ Y + L + Sbjct: 129 SQLSPLPEMVSFRFNPGPERQG-NVIIGDPKEAKFGSTREQLIDGYRRCAELGISRFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M + ++++ A L + R G +++ I++GGG+G+ Y P + Sbjct: 188 AMVVSNELNIEALLQTAEMLFELAAEIHRETGISVECINLGGGIGVPYQPGQEPVDLPAF 247 Query: 257 ASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + ++ +I++E GR + G L+TKVI +KS+ K +V +D M+ Sbjct: 248 GDGVRKLYESILVPAGIAPVRILMENGRAMTGPFGYLITKVI-NQKSSYKDYVGVDACMS 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH I + DIVG +CE D A++RK+ GD+ I Sbjct: 307 NLMRPGMYGAYHHITVMGKEDQPADR-TVDIVGSLCENNDKFAIDRKMPATEVGDIAVIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNG-SQFHIIRPRMTFQELI 411 GA+G YN RL EI+ N +F IR TF++ Sbjct: 366 DAGAHGHSMGFQYNGRLRSAEIVFNDAGEFRAIRRAETFEDYF 408 >gi|269928458|ref|YP_003320779.1| diaminopimelate decarboxylase [Sphaerobacter thermophilus DSM 20745] gi|269787815|gb|ACZ39957.1| diaminopimelate decarboxylase [Sphaerobacter thermophilus DSM 20745] Length = 445 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 119/425 (28%), Positives = 197/425 (46%), Gaps = 16/425 (3%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 G V+L + TP Y Y + + A G D V Y++KAN + A Sbjct: 19 QNGVFSPGGVALADVVDRAGTPCYLYHGGVVLEQLERVRAAV-GPDVEVAYSVKANPSLA 77 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + + LA G+G ++ S GEL ALAA V ERIVF+G GKT DE+ A+++GI+ NVES Sbjct: 78 LTQLLARAGAGAEVASAGELHLALAAGVDPERIVFAGPGKTEDELRRAVRAGIFAVNVES 137 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E++ L + A G+ + R+NP + G + +FG+ + A Sbjct: 138 LGEIERLARVAEGEGRDVGVGLRINPAQPLIG-SHMRMGGRPTQFGVDEADLERAVALVE 196 Query: 187 TLPGVKISGVDMHIGSQIDQIES-FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + P +++ G+ ++ +Q+ ++ A + + + G ++ ID GGG GI Y Sbjct: 197 SKPRLRLRGLHVYTATQVFDADALVEHARNVFDLAARVADAAGRPLEMIDFGGGFGIPYF 256 Query: 246 SDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSAD 298 P + + + ILE GR+LVA+ G+ +T+V+ +K+S Sbjct: 257 EHLEPFDLDRFGAGFRPLLDERLSDPRLAGARFILELGRYLVAEAGVYLTRVVDVKQSWG 316 Query: 299 KTFVILDVAMNDFMR----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 KTFV+ D MN + V+ D+VGP C D + Sbjct: 317 KTFVVTDGGMNHHISATGNWGQVFRKPYPILNVSADPAAALEQTDLVGPCCTPLDMFGTD 376 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 ++ALP+PGD++ + +GAYG S + S E++V + HI+RP ++++ Sbjct: 377 IQMALPQPGDIIGVFLSGAYGYSVSSLKFLSHPEPAEVLVWQGEVHILRPGGRPEDVLAG 436 Query: 414 DS-IP 417 S +P Sbjct: 437 QSGLP 441 >gi|329961124|ref|ZP_08299379.1| diaminopimelate decarboxylase [Bacteroides fluxus YIT 12057] gi|328532062|gb|EGF58872.1| diaminopimelate decarboxylase [Bacteroides fluxus YIT 12057] Length = 386 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 131/366 (35%), Positives = 188/366 (51%), Gaps = 7/366 (1%) Query: 27 TPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TPFY Y T + A + V YA+KAN+N V+ + G G D VS GE Sbjct: 15 TPFYYYDTKVLRDTLSCIRTEASKYDNYSVHYAVKANANPKVLTIIRENGLGADCVSGGE 74 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R A+ A P+ +IVF+GVGK EI+L L I+CFNVES EL+ +N A + GK A Sbjct: 75 IRAAIKAGFPSGKIVFAGVGKADWEINLGLDYDIFCFNVESVPELEVINGLAAAKGKVAN 134 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 +AFR+NP++ A+TH I+TG E+KFGI + + + A + VK G+ HIGSQI Sbjct: 135 VAFRINPNVGAHTHANITTGLAENKFGISMQDMDHVIDVAGEMNNVKFIGLHFHIGSQIL 194 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSSDYASLIHQ 262 + F + +L +L + I+HI+VGGG + P + + Sbjct: 195 DMGDFVALCNRVNELQDKLEARRIRIEHINVGGGLGIDYAHPNRQAIPDFKKYFIAYDEH 254 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + E GR +V G L+++V+ +K+ +K F ILD M D +RP LY A+H Sbjct: 255 LKLRSYQTLHFELGRSVVGQCGSLISRVLYVKQGTNKQFAILDAGMTDLIRPALYQAFH- 313 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I N D D+VGPICE+ D + + GDL+ + GAYG + + Y Sbjct: 314 --KIENITSDAPMQTYDVVGPICESSDVFGKAIDLNGVKRGDLIALRSAGAYGEIMASGY 371 Query: 383 NSRLLI 388 N R L Sbjct: 372 NCRELP 377 >gi|116668430|pdb|2J66|A Chain A, Structural Characterisation Of Btrk Decarboxylase From Butirosin Biosynthesis gi|70720851|dbj|BAE07075.1| BtrK [Bacillus circulans] Length = 428 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 110/413 (26%), Positives = 178/413 (43%), Gaps = 20/413 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--CYALKANSNQAVIKTLAHLG 75 + L +TPFY Y IE +Y + + +LKAN+N + K G Sbjct: 8 ITALTKRFETPFYLYDGDFIEAHYRQLR---SRTNPAIQFYLSLKANNNIHLAKLFRQWG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G+++ S GEL A A AE I+FSG GK E+++A+QSGIYC ES EL + + Sbjct: 65 LGVEVASAGELALARHAGFSAENIIFSGPGKKRSELEIAVQSGIYCIIAESVEELFYIEE 124 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A K A +A R+NPD + + G +FG+ + ++ +L K G Sbjct: 125 LAEKENKTARVAIRINPDKSFGSTAIKMGGVP-RQFGMDESMLDAVMDAVRSLQFTKFIG 183 Query: 196 VDMHIGSQIDQIESFHKAFKLLRD-LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + ++ G+Q +S ++ K D G + I++GGG G+ Y S + Sbjct: 184 IHVYTGTQNLNTDSIIESMKYTVDLGRNIYERYGIVCECINLGGGFGVPYFSHEKALDIG 243 Query: 255 DY------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + Q I+E GR+L+A + VT+V+ K S + FVI+D M Sbjct: 244 KITRTVSDYVQEARDTRFPQTTFIIESGRYLLAQAAVYVTEVLYRKASKGEVFVIVDGGM 303 Query: 309 NDFM------RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 + R + E + +G R I GP+C D + + + P Sbjct: 304 HHHAASTFRGRSMRSNYPMEYIPVREDSGRRELEKVTIAGPLCTPEDCLGKDVHVPALYP 363 Query: 363 GDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 GDL+ + +GAYG S + EI+ + +IR + T +++ Sbjct: 364 GDLVCVLNSGAYGLSFSPVHFLGHPTPIEILKRNGSYELIRRKGTADDIVATQ 416 >gi|325970952|ref|YP_004247143.1| diaminopimelate decarboxylase [Spirochaeta sp. Buddy] gi|324026190|gb|ADY12949.1| Diaminopimelate decarboxylase [Spirochaeta sp. Buddy] Length = 421 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 102/402 (25%), Positives = 164/402 (40%), Gaps = 15/402 (3%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV-CYALKANSNQAVIKTLAHLGSGL 78 +LA+ + TPFY Y AI N F YA+KA N ++K L+ G G Sbjct: 15 ELAYQLPTPFYLYDEKAIVDNARNLKKLFSWAPGFCNYYAVKACPNPTILKLLSQEGFGA 74 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S EL + A+ + ++I+ + DE A + G + Sbjct: 75 DCSSLPELLLSKASGITGKKIMLTSNDTPADEFKAAYELGAIINLDDITHIQALEEAIGT 134 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 I FR NP + T I E K+G+ QI Y M Sbjct: 135 VPE---TICFRYNPGPD-RTGNAIIGNPVEAKYGVTSSQIVDCYRIMKEKGVKHFGLHTM 190 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 +++D A L + + G I+ ID+GGG+GI Y D + + Sbjct: 191 VASNELDGSYIVETARMLFDLCVRIQKEAGIRIEFIDMGGGIGIPYRLDQEAMDLAMVSK 250 Query: 259 LIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + + +I+ E GR + G LV+KV+ + K +V LD +M + Sbjct: 251 EMQKLYETIVVPAGLDPLQIVFECGRVITGPYGYLVSKVLHVTNK-YKDYVGLDASMANL 309 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 MRP LY +YH I + H D+ G +CE D A++RK+ + GD++ + Sbjct: 310 MRPALYGSYHHITVLGKDKQPCDH-TYDVTGSLCENNDKFAIDRKLPAMQKGDVVVLHDA 368 Query: 372 GAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+G YN++L E ++ +IR T+++ +E Sbjct: 369 GAHGHSMGFNYNAKLRSAEYLLKRDGSVVMIRRAQTYEDYVE 410 >gi|218130087|ref|ZP_03458891.1| hypothetical protein BACEGG_01674 [Bacteroides eggerthii DSM 20697] gi|317476580|ref|ZP_07935826.1| diaminopimelate decarboxylase [Bacteroides eggerthii 1_2_48FAA] gi|217987591|gb|EEC53919.1| hypothetical protein BACEGG_01674 [Bacteroides eggerthii DSM 20697] gi|316907256|gb|EFV28964.1| diaminopimelate decarboxylase [Bacteroides eggerthii 1_2_48FAA] Length = 386 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 134/370 (36%), Positives = 194/370 (52%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y T + D V YA+KAN+N V+ + G G D V Sbjct: 11 RELRTPFYYYDTKVLRDTLTCIRTEASRYDNYSVHYAVKANANSKVLTIIRESGLGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA +IVF+GVGK EI+L L I+CFNVES EL+ +N+ A + G Sbjct: 71 SGGEIRAAIKAGFPANKIVFAGVGKADWEINLGLDYDIFCFNVESIPELEIINELAEAKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NP++ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KIANVAFRINPNVGAHTHANITTGLAENKFGISMQDMDHVIDVAQEMKNVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG--GLGIAYHSDHRPPSSSDYA-S 258 SQI + F + +L +L + I+HI+VGG G+ + + P Y + Sbjct: 191 SQILDMGDFVALCNRVNELQDRLEARQIRIEHINVGGGLGIDYGHPNRQAIPDFKSYFET 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + E GR +V G L+++V+ +K+ A+K F ILD M D +RP LY Sbjct: 251 YDNCLKLRSYQTLHFELGRSVVGQCGSLISRVLYVKQGANKQFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A+H I N D D+VGPICE+ D + + GDL+ + GAYG + Sbjct: 311 AFH---KIENLTSDAPLQTYDVVGPICESSDVFGKAVDLNGVKRGDLMALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASGYNCRELP 377 >gi|149280434|ref|ZP_01886554.1| diaminopimelate decarboxylase [Pedobacter sp. BAL39] gi|149228848|gb|EDM34247.1| diaminopimelate decarboxylase [Pedobacter sp. BAL39] Length = 384 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 123/365 (33%), Positives = 187/365 (51%), Gaps = 3/365 (0%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TPFY Y ++ S A + V YA+KAN N V++ + G G D VS Sbjct: 11 AKLETPFYYYDLALLQNTLSNCSAAAKVYNFHVHYAMKANFNPRVLEMIKATGFGADCVS 70 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GE++RA+ ++IVF+GVGK+ EI+ AL I+CFNVES EL+ +N+ A Sbjct: 71 GGEVKRAVEVGFNHQQIVFAGVGKSDREINDALDQQIFCFNVESIQELEVINELAGLKNT 130 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA +A R+NP+++A+TH I+TG E+KFGI + ++ GV HIGS Sbjct: 131 KAKVAIRINPNVDAHTHHNITTGLDENKFGINSWDLPQCAEVLKQSENLEFIGVHFHIGS 190 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-SDHRPPSSSDYASLIH 261 QI ++ F + + G ++ ++VGGGLGI YH + + P Y + H Sbjct: 191 QITSMDVFKNLCVRVNEFAAWFEERGFIVKVLNVGGGLGIDYHNPEQQIPDFEAYFKVYH 250 Query: 262 QY-FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + ++ E GR LV L++KV+ +K K F++LD M + MRP LY Sbjct: 251 DFLEVRSNQEVHFELGRALVGQCASLISKVLYVKNGKKKNFIVLDAGMTELMRPALY-QA 309 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + ++ + + D+VGPICE+ D + GDL+ + GAYG V + Sbjct: 310 YHQIDHLSGSKSAEGVKYDVVGPICESTDCFGKEVALPETFRGDLIALRSAGAYGEVMAS 369 Query: 381 TYNSR 385 YN R Sbjct: 370 HYNLR 374 >gi|300741295|ref|ZP_07071316.1| diaminopimelate decarboxylase [Rothia dentocariosa M567] gi|300380480|gb|EFJ77042.1| diaminopimelate decarboxylase [Rothia dentocariosa M567] Length = 498 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 115/475 (24%), Positives = 182/475 (38%), Gaps = 62/475 (13%) Query: 2 SAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTM 54 +F+ G L + ++ +L TP Y +S + AF+ G Sbjct: 23 DSFQRNHGGELTIDGIAASELVKEFDTPQYVFSEDTFRARARGYRQAFEDAFARHGAQVS 82 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 V YA K+ +V + G LD S GEL AL A VP + I G K+ EI A Sbjct: 83 VYYAGKSFLCTSVARWAYEEGLCLDTASGGELAIALRAQVPGQNIALHGNNKSRGEIARA 142 Query: 115 LQSGIYCFNVESESELKTLNQRA-----------VSLGKKAPIAFRVNPDINANTHKKIS 163 ++ G+ +S ELK + P+ R+ P ++A+TH+ I+ Sbjct: 143 IKHGVGRVVADSVDELKLIADVHAELNTERAAAGQEPYPAVPVLIRITPGVHASTHESIA 202 Query: 164 TGKKEDKFGIPIHQIHSLYA--YASTLPGV----------------------KISGVDMH 199 T ++ KFG+ + + A A L G+ H Sbjct: 203 TAHEDQKFGMSLQPGTARLAGLEADELEYWSTTEDESYAMLAAGILTATDSLDFRGIHCH 262 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 IGSQI + + F +A + ++ +D+GGG GI Y P S Sbjct: 263 IGSQIFEAQGFEQAADTALTFMHAVNQKYGISLPELDLGGGYGIGYTEADTPRSIEQITV 322 Query: 259 LIHQYF-------GNLQCKIILEPGRFLVADVGILVTKVIS---------IKKSADKTFV 302 I G + EPGR + G+ + V + + + +V Sbjct: 323 SIADAVAATCGRLGMTIPHMSFEPGRSISGPSGVTLYTVGTIKNVSIEDEHGQIRVRRYV 382 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPR 361 +D M+D RP LYDA + + + N A + + +VG CE+GD + + Sbjct: 383 SVDGGMSDNARPVLYDADY-MVTLANRAPAGEQVLSRVVGKHCESGDIVVRYCYLPADLC 441 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ-FHIIRPRMTFQELIELDS 415 GD+L + TGAY V YN P I + + H I R + E++ LD+ Sbjct: 442 AGDILAVPATGAYCYVLGSNYNYLSRPPVIATSAGEAAHPIIRRQSEDEMLALDT 496 >gi|284048965|ref|YP_003399304.1| Orn/DAP/Arg decarboxylase 2 [Acidaminococcus fermentans DSM 20731] gi|283953186|gb|ADB47989.1| Orn/DAP/Arg decarboxylase 2 [Acidaminococcus fermentans DSM 20731] Length = 420 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 86/404 (21%), Positives = 146/404 (36%), Gaps = 15/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 +EKLA TPF+ Y I + + AF +A+KA ++K + G Sbjct: 12 VEKLAETYPTPFHIYDEKGIRNTVRSINKAFAWNKGFKEYFAVKATPLPGILKIMKEEGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + I+FS + ++ A + G + Sbjct: 72 GTDCSSYPELLLSDVCGFKGHDIMFSSNDTPVKDMQEAYKLGAIINLDDFTMIDFLEQ-- 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I R NP I + K+G+ Q+ + Sbjct: 130 --VAAIPETICCRFNPGGVFALGNDIMDNPGDSKYGMTRDQLREAFKILKAKGVKHFGIH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G + I++ GG+GI Y + P + Sbjct: 188 AFLASNTVTNGYYPELARQLFQLAVDMKKETGVAVDFINLSGGVGIPYRPEQTPNDIAAI 247 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + E GRF+ G LVTKV+ K + + A N Sbjct: 248 GEGVRKVYEEVLTPAGMGNVALFTEMGRFVTGPYGGLVTKVLHFKHIYKEYVGVDACAAN 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP +Y AYH I + + D+ G +CE D A++RK+ GD L+I Sbjct: 308 LM-RPAMYGAYHHITVLGK-ENEPCDHTYDVTGGLCENNDKFAIDRKLPKIDKGDYLFIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G+ YN++L E+++ ++R T ++ Sbjct: 366 DTGAHGSAMGYNYNAKLWCAELLLKEDGSVELLRRAETEKDYFA 409 >gi|94984897|ref|YP_604261.1| diaminopimelate decarboxylase [Deinococcus geothermalis DSM 11300] gi|94555178|gb|ABF45092.1| diaminopimelate decarboxylase [Deinococcus geothermalis DSM 11300] Length = 385 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 108/395 (27%), Positives = 166/395 (42%), Gaps = 22/395 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A TP Y Y ++ AF V YA+KAN N +++ L G G + V Sbjct: 12 AARFGTPLYVYDAAELDAALARVRAAFGE--ARVFYAMKANPNLTLLRRLRAAGVGFECV 69 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+ RA + ++ +G K+ E Q G + L Sbjct: 70 SAGEIARAEHVGASGDALLINGPAKSAQEYAAGAQLGATLIVDR--------AEEVGLLP 121 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 ++ RVNP + +TH ++TG KFG+ + Q + A G G+ +HIG Sbjct: 122 PRSKALVRVNPALAVSTHDHLATGAAGSKFGVTLEQAPDVLR-ALRAAGHDARGLHVHIG 180 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 S I + F AF + +LR N++ +DVGGG + A Sbjct: 181 SAIREAADFSAAFARV----AELRPQTGNLEVLDVGGGWSVGAD-------LPGIAREAR 229 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++ +EPGR+LVA G L+T+V+ K++ + + Sbjct: 230 AAAAVFGAQLWVEPGRYLVAQAGTLLTRVVGTKRTGRNFLLTDAGMTELLRPMLYGAQHP 289 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 +P + D+ GP CE+GD +A + + P PGDLL I + GAYGA S + Sbjct: 290 VTALWDDPQPETAGERWDVAGPACESGDLLARDVCLPSPHPGDLLAIAEAGAYGASMSSS 349 Query: 382 YNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 Y +R E + +GS + +IR R T QEL + I Sbjct: 350 YLTRSRPAEALWDGSDWILIRRRETPQELWAAEEI 384 >gi|271498687|ref|YP_003331712.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech586] gi|270342242|gb|ACZ75007.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech586] Length = 446 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 111/414 (26%), Positives = 183/414 (44%), Gaps = 12/414 (2%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 + E + + +A V TPFY YS + + DT V Y+LKAN N +V+KTL Sbjct: 25 YVEEIPVATIARHVGTPFYVYSARQLRRQLQHLYQQLP-ADTAVYYSLKANPNLSVVKTL 83 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G+G ++ S EL ALAA V + I++ G GK++ + A+ GI ES +EL Sbjct: 84 VEQGTGCEVCSPAELDTALAAGVLPQHILYVGPGKSLAALSHAMDCGIRAIVAESVTELD 143 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 +NQ A G +A R+NP+ ++ H ++ K +FG+ + + ++ S P + Sbjct: 144 NINQLAAQAGTVQTVALRINPNFSS-EHARLVMSGKPTQFGMTLDTLQTVLTCLSRWPSL 202 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + G +++G++I ++ + + L LR GG + P Sbjct: 203 AVRGFHVYLGTRILNAQAIANNTRNILQLALNLRDQYQLTLDFVDIGGGFGVPYFPKETP 262 Query: 252 SSSD------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + +II+E GR+LVA+ G+ VT+V ++K + KTF I D Sbjct: 263 LDLPALGDAIAPIVADFRRQATNTQIIIELGRYLVAEAGLFVTRVNTLKTAGGKTFAICD 322 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALNRKIALPRP 362 N ++ N+ + GD R + GP+C D + N + Sbjct: 323 GGANCHSAAAGLNSMLRKNFPLLRLGDNHSRPVQPYQVSGPLCTPTDLLGDNVLLPTLAV 382 Query: 363 GDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 DL+ I +GAYG S + S E+MV+G + IR T +L+ Sbjct: 383 NDLIGIAHSGAYGLTASPGLFLSFGYPAEVMVDGHRLIQIRQPETTAQLLARQQ 436 >gi|301103215|ref|XP_002900694.1| diaminopimelate decarboxylase, putative [Phytophthora infestans T30-4] gi|262101957|gb|EEY60009.1| diaminopimelate decarboxylase, putative [Phytophthora infestans T30-4] Length = 410 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 98/397 (24%), Positives = 162/397 (40%), Gaps = 17/397 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHL 74 L+ LA TP Y I N AF D YA+KA N A++K L Sbjct: 12 RLDALAETYGTPLQIYDEQLIRDNARRLLTAFRAHFPDFQQFYAVKALPNPAILKLLHQE 71 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G G+D S EL VP ++++F+ +++ A G+ + + Sbjct: 72 GCGMDCSSSAELHIVKELGVPGDQVIFTSNFTAKNDLGTAFDQGVIMNLDDVSLVDSLVA 131 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + K G + KFG+P QI Y A G K Sbjct: 132 -VRGKCPELMSFRLNPGIGRTDSETKSNVLGGPDAKFGVPPFQIVEAYRKAQQ-AGAKGF 189 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G+ M GS + E + + +L + Q + G + +++GGGLGI Y D P + Sbjct: 190 GIHMMTGSCVMNQEYWRETVTVLFNTIVQLKKELGIEFEFMNIGGGLGIPYREDQEPVNV 249 Query: 254 SDYASL--------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 A + + ++ ++ +E GRF+ G LVT+ +IK++ + +D Sbjct: 250 EAIAKMLREVFDEAVKEHGLQTLPRLCMENGRFMTGPFGWLVTRCEAIKETYG-RYYGVD 308 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 M MRP +Y A+H I+ + + +VG +CE D+ A +R + + GDL Sbjct: 309 ACMAHLMRPGMYGAFHHISIPAR--ANEEVSPSHVVGTLCENNDWFAKDRPLPKAQVGDL 366 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHII 401 I TGA+ YN +L PE+++ ++ Sbjct: 367 FVIHDTGAHSHSMGFQYNGKLRAPEVLLRADGSDSLM 403 >gi|224370799|ref|YP_002604963.1| LysA4 [Desulfobacterium autotrophicum HRM2] gi|223693516|gb|ACN16799.1| LysA4 [Desulfobacterium autotrophicum HRM2] Length = 417 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 105/410 (25%), Positives = 165/410 (40%), Gaps = 18/410 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 LEK TPF+ Y I + AF YA+KA N +++K + LG Sbjct: 15 LEKARKHFGTPFHIYDEAGILETGARLKTAFSKIPGFREYYAVKALPNPSIMKIMQGLGF 74 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S E+ A P++ I+F+ + + + A G N++ S + + Sbjct: 75 GFDCSSTPEILLARQINSPSQDIMFTSNNTSQKDFETACMDGGVILNLDDISLVPKV--- 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I FR NP +K I + K+G+ QI Y A + Sbjct: 132 ---PVMPELICFRYNPGPRREGNKIIGNPVES-KYGVSYDQIIDAYKAAMDRGAKRFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M +++D +L + + + I++GGGLGI Y + +P Sbjct: 188 TMLASNELDYTYMVETTRMILDMVKMVSTALNITFEFINIGGGLGIPYRPEDKPLDIEAL 247 Query: 257 ASLI------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 Q + K+ +E GRF+ G LVT VI+ K + +V +D +M+ Sbjct: 248 GRETGDLLAKFQQTHDWSPKLFMESGRFITGPHGALVTTVINHKDI-YRQYVGVDASMSA 306 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP +Y+AYH +I + D+VG +CE D A+ R + GDLL I Sbjct: 307 LMRPGMYNAYHH-IHIPGKEHSKDLQTVDVVGSLCENNDKFAVQRTLPRTEEGDLLVIHD 365 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE-LDSIPA 418 TGA+G YN L E+++ +IR ++ LD P Sbjct: 366 TGAHGHAMGFNYNGNLRPKELLLKTDGTIELIRRAERVEDYFATLDFEPD 415 >gi|154502727|ref|ZP_02039787.1| hypothetical protein RUMGNA_00541 [Ruminococcus gnavus ATCC 29149] gi|153796610|gb|EDN79030.1| hypothetical protein RUMGNA_00541 [Ruminococcus gnavus ATCC 29149] Length = 424 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 148/404 (36%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L+++ TPF+ Y I +N AF +A+KA N +I L Sbjct: 12 LDEIMKTYPTPFHLYDEKGIRENVKALREAFSWNEGYKEYFAVKACPNPFLIDILREYDC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A V + I+FS ++ LA + G + Sbjct: 72 GCDCSSYTELMLSDAIGVKGQDIMFSSNDTPAEDYVLAEKLGAIINLDDFTHIDFLEKTI 131 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ Q+ + + + Sbjct: 132 GYIPE---TISCRYNPGGLFKISNDIMDNPGDAKYGMTTEQLFEAFKILKSKGAKEFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A L + + G +I+ I++ GG+GI Y D P Sbjct: 189 AFLASNTVTNDYYPMLAKVLFEQAVKLQKETGVHIKFINLSGGIGIPYTPDQEPNDIRVI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GRF++ G LVT I K + K ++ +D Sbjct: 249 GEGVRRVYEEVLVPAGMGDVAIYTELGRFMMGPYGCLVTTAIHEKHT-HKEYIGVDACAV 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 D MRP +Y AYH I + H D+ G +CE D A++R + GD L I Sbjct: 308 DLMRPAMYGAYHHITVMGKEDAPHDH-KYDVTGSLCENNDKFAIDRMLPEIEKGDYLVIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G +YN +L E+++ +IR + Sbjct: 367 DTGAHGFAMGYSYNGKLKHAELLLKEDGSVQMIRRAERPADYFA 410 >gi|261338624|ref|ZP_05966508.1| diaminopimelate decarboxylase [Bifidobacterium gallicum DSM 20093] gi|270276343|gb|EFA22197.1| diaminopimelate decarboxylase [Bifidobacterium gallicum DSM 20093] Length = 479 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 118/464 (25%), Positives = 204/464 (43%), Gaps = 57/464 (12%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 +G + ++ +L +P Y T + F +NAF T V +A KA Sbjct: 16 DGQVAFHGITATQLLDEFGSPLYVIDTDEVRDRARAFVEAAANAFHNTTTHVSFAGKAFL 75 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 + +++ + G +D S GE+ ALAA VP R+V G K+ EI+LA++ G Sbjct: 76 CKEIVRIVVQQGMFVDTCSLGEMTIALAAGVPGRRLVLHGNNKSDAEIELAIREGFNKIV 135 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 ++ +E + A LGK+A + RV I+A H+ +ST ++ KFG+ + +++ Sbjct: 136 IDEPNEAARIAAIAQRLGKRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVALLPVNADLQ 195 Query: 184 -------------------------------------YASTLPGVKISGVDMHIGSQIDQ 206 A +++ GV HIGS I Sbjct: 196 VVDSVVERIGGHMGDSPELLEALNIIAQGPAIAALQGIAEHADWLELVGVHSHIGSNIHD 255 Query: 207 IESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-------AS 258 E+F +A + + L + G+ + +D+GGG +AY S Sbjct: 256 AEAFIQAARRMMLLRKTFHAVAGYLMPEVDLGGGYSVAYTDGEDLMDVDRELSRLAASVS 315 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK------KSADKTFVILDVAMNDFM 312 +++ G I EPGR++VA G+ + +V ++K A++T+V +D M+D + Sbjct: 316 AVNRALGMPAPTISFEPGRWIVAPAGVTLYRVGTVKTVELSVDPAERTYVSVDGGMSDNI 375 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKT 371 RP LY A + + N + +VG CE+GD + N + GD+L + T Sbjct: 376 RPALYGADY-TAVLANRESTAAPRLSRVVGIHCESGDIVVNNVFLPDDITRGDVLAVPVT 434 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAYG + YN +L+ + V+ H++ R T ++L++LD Sbjct: 435 GAYGRTMASNYNQQLIPAVVGVSSEGAHVMMRRQTLEDLLDLDV 478 >gi|253699983|ref|YP_003021172.1| Orn/DAP/Arg decarboxylase 2 [Geobacter sp. M21] gi|251774833|gb|ACT17414.1| Orn/DAP/Arg decarboxylase 2 [Geobacter sp. M21] Length = 421 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 95/404 (23%), Positives = 165/404 (40%), Gaps = 17/404 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLG 75 + ++ QTPF+ Y + I + AF G +A+KA N+ ++K + +G Sbjct: 14 RIPQIQQHFQTPFHIYDESGIRETGAQLVKAFSGIPGFREFFAVKALPNREILKLMKEMG 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G D S E+ A E I+F+ + +E D A Q G N++ S ++ + Sbjct: 74 FGFDCSSIPEVILARELGARPEDIMFTSNNTSQEEFDFATQDGGCILNLDDISLIEKVPH 133 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + R T I +E K+G+ Q+ Y A + Sbjct: 134 FPEMICFRYNPGPRR-------TGNVIIGNPEEAKYGVSHEQVVEAYRKAKERGATRFGL 186 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 M +++D A +L + + G + +++GGG GI Y + +P + Sbjct: 187 HTMVASNELDYTYIVETARMVLEVAEEVEAALGIEFEFVNIGGGFGIPYRPEQKPLDLTG 246 Query: 256 YASLIHQYF------GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 ++ I + F + +E GRF+ G + K + ++ +D M+ Sbjct: 247 MSAEITELFDGFRKRHGHAPAMYMESGRFMTGPHG-ALVTTAINSKDTYRRYIGVDACMS 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 MRP LY AYH I+ + D D+VG +CE D A+ R++ GD+L I Sbjct: 306 ALMRPALYGAYHHIDVLGKDR-DPKTEIYDVVGSLCENNDKFAVQRELQPVEDGDILVIH 364 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 +GA+G YN RL E+M+ + +IR T + Sbjct: 365 DSGAHGHAMGFQYNGRLRPKELMLRADGRVELIRRAETVADYFA 408 >gi|322375830|ref|ZP_08050341.1| protein TabA [Streptococcus sp. C300] gi|321279098|gb|EFX56140.1| protein TabA [Streptococcus sp. C300] Length = 418 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 159/410 (38%), Gaps = 16/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FISREDLETIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + P I+FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V KK+ +T++ Sbjct: 241 NDIAVIGEGVRKVYEEVLTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKT-YRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I + +P + G +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHITNLTHPDEPVEVVDVV--GSLCENNDKFAVNRELPHTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 DLL I TGA+G YN++L EI+ + IR ++ Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSAEILYTEEGKARQIRRAERPEDYFA 407 >gi|302670604|ref|YP_003830564.1| diaminopimelate decarboxylase LysA [Butyrivibrio proteoclasticus B316] gi|302395077|gb|ADL33982.1| diaminopimelate decarboxylase LysA [Butyrivibrio proteoclasticus B316] Length = 429 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 94/404 (23%), Positives = 148/404 (36%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 +E + TPFY Y + N +AF +A+KA N +++ L LG Sbjct: 11 VEDIVKDFPTPFYLYDEKGLVDNAKAVYDAFSWNKGFKEYFAVKATPNPVLMEILKSLGC 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D SE EL + A I+FS E A + G + Sbjct: 71 GFDCSSETELMLSQAIGASGADIMFSSNDTPAREYAYADKLGAIINLDDFTHIDFLEE-- 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ Q+ Y + Sbjct: 129 -TIGKIPETISCRYNPGGVFQMSNGIMDNPGDSKYGMTKDQLFEAYKILRSKGARNFGIH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + + G I I++ GG+GI Y D Sbjct: 188 AFLASNTVTNEYYPQLAGQLFELAVELQKETGCKIAFINLSGGVGIPYRPDQEANDIKAI 247 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + F I E GRF++ G LVTK I K K ++ +D Sbjct: 248 GEGVRRQFENILVPAGMGDVSIFTEMGRFMMGPYGALVTKAIHEKHI-YKEYIGVDACAV 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y +YH I + + L D+ G +CE D A++R++ GD L+I Sbjct: 307 NLMRPAMYGSYHHITVLGK-ENEPLDHVYDVTGSLCENNDKFAIDRQLPEIEMGDYLFIH 365 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T ++ Sbjct: 366 DTGAHGYAMGYNYNGKLKCAELLLKEDGSVQMIRRAETARDYFA 409 >gi|325269420|ref|ZP_08136037.1| diaminopimelate decarboxylase [Prevotella multiformis DSM 16608] gi|324988341|gb|EGC20307.1| diaminopimelate decarboxylase [Prevotella multiformis DSM 16608] Length = 385 Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 137/370 (37%), Positives = 194/370 (52%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSN-AFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y + + A D +V YA+KAN+N V+K ++ G G D V Sbjct: 11 KHIETPFYYYDCNLLRETLQAIHEEARTHADFIVHYAVKANANAKVLKMISRAGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE++R L + PA IV++GVGK EI+LAL I+CFNVES +EL +N A G Sbjct: 71 SGGEIQRCLDSGFPAGSIVYAGVGKADWEINLALDHDIFCFNVESVAELDVINSLAARKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A I FR+NPD+ A+THK I+TG E+KFGI + + A + ++ G+ HIG Sbjct: 131 KVANICFRINPDVGAHTHKMITTGLAENKFGIAMQDMVPAIREAERMANIRFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 SQI + + + ++ L G ++HI+VGGGLGI Y P A Sbjct: 191 SQILDMTDYRHLCSRINEIQDGLEEQGIEVRHINVGGGLGIDYERPDSHPIPDFKAYFYV 250 Query: 262 QYFG---NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 K+ E GR +V +G L+T+ + +K+ K F I+D M D +RP LY Sbjct: 251 FAHYLKLREGQKLHFELGRAVVGQMGSLITRTLYVKQGTAKQFAIVDAGMTDLIRPALYH 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A HEI N + D D+VGPICE+ D A + + GDL+ + GAYG + Sbjct: 311 ARHEIE---NLSSDGPEQIYDVVGPICESSDVFAKDIPLNTVHRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASQYNCRRLP 377 >gi|320335247|ref|YP_004171958.1| diaminopimelate decarboxylase [Deinococcus maricopensis DSM 21211] gi|319756536|gb|ADV68293.1| diaminopimelate decarboxylase [Deinococcus maricopensis DSM 21211] Length = 410 Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 112/398 (28%), Positives = 179/398 (44%), Gaps = 27/398 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L A TP Y Y ++ AF V YA+KANSN V++ L G G Sbjct: 40 LLDAAERFGTPLYVYDAAELDAAVGRVRAAFGH--ARVSYAMKANSNLTVLRRLQARGIG 97 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 + VS GEL RA + ++ +G K+ +E L G + Sbjct: 98 FECVSLGELHRAREVGARGDDVLVNGPAKSAEEYTLGAALGATFIVDR--------EEEV 149 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 L ++ RVNP ++ +TH ++TG KFG+ + + A A G G+ Sbjct: 150 ALLPPRSRALVRVNPALDVSTHDHLATGAAISKFGVRLDVAADVLA-ALRAAGHDARGLH 208 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +HIGS I F +AF L DL ++ +DVGGG + A Sbjct: 209 VHIGSAIRDAADFERAFARLADL----APLTGPLEVLDVGGGWSLDAD-------LHGIA 257 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + + ++ +EPGR+LVA G L+T+V+ +K++ ++F ++D M + +RP LY Sbjct: 258 ARAREAASAFGAQVWVEPGRYLVAGAGALLTRVVGLKRT-GRSFALIDAGMTELLRPMLY 316 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 A H + D+ GP CE+GD +A + ++ P G ++ + + GAYGA Sbjct: 317 GAQHPV---QALWSGADVQTYDLAGPACESGDLLARDVRLPEPHVGAVIAVGEAGAYGAS 373 Query: 378 QSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 S TY +R E++ ++ +IR R T Q+L + Sbjct: 374 MSSTYLTRSRPMEVL-WDGEWSVIRRRETPQDLWATEV 410 >gi|89255705|ref|YP_513066.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica LVS] gi|167009944|ref|ZP_02274875.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FSC200] gi|254367082|ref|ZP_04983116.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica 257] gi|89143536|emb|CAJ78713.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica LVS] gi|134252906|gb|EBA52000.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica 257] Length = 389 Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 134/399 (33%), Positives = 202/399 (50%), Gaps = 16/399 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYA 58 M+ + F+ + E + L TP Y Y +E +L + D + + YA Sbjct: 1 MNKYIIFDNTKLLEYIGKNSLI----TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYA 56 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN N ++ G G+D VS GE++RAL V ++ IVF+ EI+LA+ + Sbjct: 57 IKANHNPKIVGIAKKYGMGIDCVSGGEIKRALEQKVDSQHIVFAR-----FEIELAIDND 111 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ FN ES E++ +NQ A K+ I RVNP+I+A TH ISTG+ +DKFGI I Sbjct: 112 IFAFNSESLEEIQVINQIAQRKNKQVNICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDI 171 Query: 179 HSLYAYAS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + I G+ H+GSQI + F + + LR N NI+HI+ G Sbjct: 172 LNWLKDEYRNFANINIIGLHYHVGSQILNYQVFQSLAITTNEHIKLLRQNDINIKHINFG 231 Query: 238 GGLGIAYHSDHRPP---SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GGLGI Y + + P +A + + + + E GR LV G+LV++V+ K Sbjct: 232 GGLGIDYQNPQQNPIVDFDGYFARFREFFKYSDELVLHFELGRSLVGQSGVLVSQVLFNK 291 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + FVI+D M + +RP LY A H+I +++ ++ H IVGPICE+ D A Sbjct: 292 VTQGTHFVIIDAGMTELIRPALYQAQHKIAALIDENINQ-KQHYHIVGPICESSDVFAKY 350 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 ++ + GDLL I GAYG V + YN R + E + Sbjct: 351 YQLPKLKRGDLLAIYSAGAYGKVLASEYNLRPSVQEYFI 389 >gi|115314200|ref|YP_762923.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica OSU18] gi|156501657|ref|YP_001427722.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FTNF002-00] gi|290953447|ref|ZP_06558068.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica URFT1] gi|295313328|ref|ZP_06803951.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica URFT1] gi|115129099|gb|ABI82286.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica OSU18] gi|156252260|gb|ABU60766.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 389 Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 135/399 (33%), Positives = 203/399 (50%), Gaps = 16/399 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYA 58 M+ + F+ + E + L TP Y Y +E +L + D + + YA Sbjct: 1 MNKYIIFDNTKLLEYIGKNSLI----TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYA 56 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN N ++ G G+D VS GE++RAL V ++ IVF+G EI+LA+ + Sbjct: 57 IKANHNPKIVGIAKKYGMGIDCVSGGEIKRALEQKVDSQHIVFAG-----FEIELAIDND 111 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ FN ES E++ +NQ A K+ I RVNP+I+A TH ISTG+ +DKFGI I Sbjct: 112 IFAFNSESLEEIQVINQIAQRKNKQVNICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDI 171 Query: 179 HSLYAYAS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + I G+ H+GSQI + F + + LR N NI+HI+ G Sbjct: 172 LNWLKDEYRNFANINIIGLHYHVGSQILNYQVFQSLAITTNEHIKLLRQNDINIKHINFG 231 Query: 238 GGLGIAYHSDHRPP---SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GGLGI Y + + P +A + + + + E GR LV G+LV++V+ K Sbjct: 232 GGLGIDYQNPQQNPIVDFDGYFARFREFFKYSDELVLHFELGRSLVGQSGVLVSQVLFNK 291 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + FVI+D M + +RP LY A H+I +++ ++ H IVGPICE+ D A Sbjct: 292 VTQGTHFVIIDAGMTELIRPALYQAQHKIAALIDENINQ-KQHYHIVGPICESSDVFAKY 350 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 ++ + GDLL I GAYG V + YN R + E + Sbjct: 351 YQLPKLKRGDLLAIYSAGAYGKVLASEYNLRPSVQEYFI 389 >gi|254368983|ref|ZP_04984996.1| hypothetical protein FTAG_00817 [Francisella tularensis subsp. holarctica FSC022] gi|157121904|gb|EDO66074.1| hypothetical protein FTAG_00817 [Francisella tularensis subsp. holarctica FSC022] Length = 389 Score = 200 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 135/399 (33%), Positives = 202/399 (50%), Gaps = 16/399 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYA 58 M+ + F+ + E + L TP Y Y +E +L + D + + YA Sbjct: 1 MNKYIIFDNTKLLEYIGKNSLI----TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYA 56 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN N ++ G G+D VS GE++RAL V ++ IVF+GV I+LA+ + Sbjct: 57 IKANHNPKIVGIAKKYGMGIDCVSGGEIKRALEQKVDSQHIVFAGVE-----IELAIDND 111 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I+ FN ES E++ +NQ A K+ I RVNP+I+A TH ISTG+ +DKFGI I Sbjct: 112 IFAFNSESLEEIQVINQIAQRKNKQVNICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDI 171 Query: 179 HSLYAYAS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + I G+ H+GSQI + F + + LR N NI+HI+ G Sbjct: 172 LNWLKDEYRNFANISIIGLHYHVGSQILNYQVFQSLAITTNEHIKLLRQNDINIKHINFG 231 Query: 238 GGLGIAYHSDHRPP---SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GGLGI Y + + P +A + + + E GR LV G+LV++V+ K Sbjct: 232 GGLGIDYQNPQQNPIVDFDGYFARFREFFKYCDELALHFELGRSLVGQSGVLVSQVLFNK 291 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + FVI+D M + +RP LY A H+I +++ ++ H IVGPICE+ D A Sbjct: 292 VTQGTHFVIIDAGMTELIRPALYQAQHKIAALIDKNINQ-KQHYHIVGPICESSDVFAKY 350 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 ++ + GDLL I GAYG V + YN R + E + Sbjct: 351 YQLPKLKRGDLLAIYSAGAYGKVLASEYNLRPSVQEYFI 389 >gi|268325449|emb|CBH39037.1| diaminopimelate decarboxylase [uncultured archaeon] gi|268325761|emb|CBH39349.1| diaminopimelate decarboxylase [uncultured archaeon] Length = 478 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 111/466 (23%), Positives = 182/466 (39%), Gaps = 58/466 (12%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKT 70 V + +LA TP Y IE NY + A + + + ++CYA+KAN+ A+IK Sbjct: 15 ICGVDMVELAEKYGTPLYVLFEELIESNYKQYQTALNDVYKNHLICYAVKANTTFAIIKL 74 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L LG+G D+ SE EL+ L A +P +I +G K+ ++ +++GI EL Sbjct: 75 LGELGAGADVASEYELQFTLDAGIPPAKIRANGNCKSEQYLEECIKNGILINVDPE-EEL 133 Query: 131 KTLNQRAVSLGKKAPIAFRVN-PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 LN+ A LG A I R+ + T I+T + KFGIP+ + L Sbjct: 134 DILNETARELGMAAKINLRLAGFPLKHITSPAITTSSEWSKFGIPVQRAKEALQKVLRLD 193 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + +G+ +H+GSQI + ++H L L G +++ I++GGG GI+Y Sbjct: 194 HLIPNGLMVHLGSQITDMGAYHLVLNELIKLAADADKIGFDVKEINIGGGCGISYLGKEE 253 Query: 250 PPSSSD----------------YASLIHQYFGNLQCKI---------------------- 271 Y L C Sbjct: 254 WNGIKSKIADTNDATWANELIGYNCNKEWVSEELYCPFTPDTFIQKLFNETYTANRTFKE 313 Query: 272 ----------ILEPGRFLVADVGILVTKVISIKKSA-DKTFVILDVAMNDFMRPTLYDAY 320 ++EPGR LV + + + +V + + + V +D +N + + Sbjct: 314 RLEAIELPKVVVEPGRSLVGNAQVTLVRVCHVGTTPSGQNIVHVDAGVNHHSQNIIVPEQ 373 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIA--LNRKIALPRPGDLLYIEKTGAYGAVQ 378 I N I G +C TGD + N + P GD + I TGAY Sbjct: 374 LHRMEIANDTDTAAGFETFIAGNLCYTGDLLCRIKNTLNSKPERGDYIIIYDTGAYSDFF 433 Query: 379 SGTYNSRLLIPEIMVNG-SQFHIIRPRMTFQELIELDSIPAWLQKT 423 + NS ++MV + ++ R T ++ D W ++ Sbjct: 434 ASNTNSFPRPAKVMVTKAGKDRVLVKRETLFDVFHRDV--DWKKRN 477 >gi|331004659|ref|ZP_08328121.1| hypothetical protein HMPREF0491_02983 [Lachnospiraceae oral taxon 107 str. F0167] gi|330409586|gb|EGG89026.1| hypothetical protein HMPREF0491_02983 [Lachnospiraceae oral taxon 107 str. F0167] Length = 423 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 155/404 (38%), Gaps = 14/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 +E++ TP++ Y I +N AF +A+KA N ++ L G Sbjct: 12 VEEIVKTYPTPWHIYDEKGIRENAKKLREAFSWNKGFKEYFAVKATPNPFIMNILNECGC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S EL A A + I+FS I+E A G + Sbjct: 72 GMDCSSMTELELADACGFMGKDIMFSSNETPIEEFKFANDLGAIINLDDI---THIEYVE 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 V G ++ R NP I + K+G+ QI + + Sbjct: 129 KVCGGLPETMSARYNPGGVFTMSNGIMDNPGDAKYGMTPDQIIEAFNIMKSKGVKNFGIH 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G + I++ GG+GI Y D P + Sbjct: 189 AFLASNTVTNEYYPKLARELFEFAVRIKNECGICVSFINLSGGVGIPYTPDEEPNDIFEI 248 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + I E GR+++ G LVTK + K + K ++ +D Sbjct: 249 GKGVKKAYDEVLTANDINDVSIFSELGRYMLGPYGALVTKAVHEKHT-YKEYIGVDACAT 307 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + MRP +Y AYH ++ + ++ D+VG +CE D A++RK+ GD +YI Sbjct: 308 NLMRPAMYGAYHHLSVLGK-EDEKDDYVYDVVGALCENNDKFAIDRKLPKIDKGDYIYIH 366 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 TGA+G YN +L E+++ +IR T ++ Sbjct: 367 DTGAHGFAMGYNYNGKLKSAELLLQEDGNVKLIRRAETSKDYFA 410 >gi|16082554|ref|NP_394250.1| diaminopimelate decarboxylase [Thermoplasma acidophilum DSM 1728] Length = 402 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 106/403 (26%), Positives = 158/403 (39%), Gaps = 19/403 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 +S++++A TP YS I N A++ + Y++KAN N +I+ + Sbjct: 14 SISGMSIDEMAKKYGTPVIIYSRARIVSNIRRIREAYE-NRVRMLYSVKANDNPRIIEIM 72 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G D S E+ ++ + +P E I++S + +++ AL GI Sbjct: 73 HQESIGSDSASPMEIMMSIFSGIPPEDILYSPNNASEYDLNFALDRGIAIN-------FN 125 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 T Q K I+FR+NP +TG KFGI Y A Sbjct: 126 TFTQYRKMREKPERISFRINPGFGMGEFAGTTTGGARTKFGIDPDAAILAYRKAREDGIR 185 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + M + D ++ R + R G + Q DVGGGLGI Y Sbjct: 186 EFGIHMMIGSNNRDHVKIAEAYSNFFRIADRIGREAGVSFQFADVGGGLGIPYVQGENEL 245 Query: 252 SSSDYASLI-HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + S + ++ ++LEPGR+LV D GI+V V + F D+ MN Sbjct: 246 DIAALGSAVLKEFDRYHFGDLVLEPGRYLVGDAGIIVGTVNDVHNG----FAGTDIGMNL 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 +RP LY A H I + + G ICE D I GD + + Sbjct: 302 NIRPALYGARHTIIPVGERV---EGEKITVTGQICENTDRIGDTAW--RLSEGDRIMVLD 356 Query: 371 TGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GAY S YN R PEIM+ + +IR R F + I Sbjct: 357 AGAYVYSMSSRYNGRPRPPEIMIMEDGKDVMIRRREDFSDFIA 399 >gi|289209688|ref|YP_003461754.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Thioalkalivibrio sp. K90mix] gi|288945319|gb|ADC73018.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Thioalkalivibrio sp. K90mix] Length = 416 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 113/405 (27%), Positives = 181/405 (44%), Gaps = 16/405 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M+AF+ + SL + L ++A TPFY Y + + A D + YA+ Sbjct: 16 MAAFEVRDHSLLIGGIPLAEIARRAGRTPFYAYDRQVMTRRVQALRQALPR-DLSIHYAI 74 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN AV+ +A L GLD+ S EL+ AL A V A I F+G GK+ E+++A+ +GI Sbjct: 75 KANPMPAVVGHMASLVDGLDVASGRELQIALDAGVSAADISFAGPGKSPAELEMAVAAGI 134 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 EL + A G+ +A RVNPD T +G + FG+ ++ Sbjct: 135 TIHLESDT-ELTRVAAIAERTGRTPCVAVRVNPDFELKTSGMKMSGGPK-VFGVDAERVP 192 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGG 238 + L G + GSQ + ES +A L DL +L + +++ +++GG Sbjct: 193 EMLGRIGELGL-HFRGFHIFAGSQNLRAESLVEAQGLTLDLALRLADHAPGSVETLNIGG 251 Query: 239 GLGIAYHSDHRPPSSSDYASL-----IHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 G GI Y +P + A Q ++ILE GR+LV + G+ V +V+ Sbjct: 252 GFGIPYFPGDQPLTLGPIAEQLERRLPEVRARMPQAEVILELGRYLVGEAGVYVAEVLDR 311 Query: 294 KKSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S + F++ + ++ + I N G+ DIVGP+C D Sbjct: 312 KVSRGRVFLVTNGGLHHHLAASGNFGQVIRKNYPVAIGNRMGEAASEVVDIVGPLCTPLD 371 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 + ++ GDL+ + ++GAYG S + S EI+V Sbjct: 372 VLGQQVELPRAEIGDLVVVFQSGAYGYTASPRGFLSHPEPAEILV 416 >gi|326624185|gb|EGE30530.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 460 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 103/443 (23%), Positives = 189/443 (42%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 18 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 77 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 78 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 137 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 138 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 196 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 197 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 256 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 257 VPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 316 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V K+ + ++ + + + Y + Sbjct: 317 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDAWVK 376 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 377 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMI 436 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 437 DKNGETRLIRREDSYEDMVKYDI 459 >gi|161612905|ref|YP_001586870.1| hypothetical protein SPAB_00611 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|198242305|ref|YP_002216433.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207857778|ref|YP_002244429.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161362269|gb|ABX66037.1| hypothetical protein SPAB_00611 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197936821|gb|ACH74154.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|206709581|emb|CAR33926.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 465 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 103/443 (23%), Positives = 189/443 (42%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V K+ + ++ + + + Y + Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDAWVK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 442 DKNGETRLIRREDSYEDMVKYDI 464 >gi|255326256|ref|ZP_05367342.1| diaminopimelate decarboxylase [Rothia mucilaginosa ATCC 25296] gi|255296710|gb|EET76041.1| diaminopimelate decarboxylase [Rothia mucilaginosa ATCC 25296] Length = 506 Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 116/474 (24%), Positives = 188/474 (39%), Gaps = 62/474 (13%) Query: 2 SAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTM 54 +F E G L + V++ L +TP Y +S T + AF+ G Sbjct: 29 DSFTRNEQGELCIDGVTVSDLVDEHETPQYVFSETTFRTRARAYRTAFEQAFAAHGAKVS 88 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 V YA K+ + AV + G LD S GEL AL A VP I G K+ EI A Sbjct: 89 VYYAGKSFLSTAVARWATEEGLCLDTASGGELALALRAQVPGANIALHGNNKSEAEIARA 148 Query: 115 LQSGIYCFNVESESELKTLNQRA-----------VSLGKKAPIAFRVNPDINANTHKKIS 163 +++G+ +S ELK + + P+ R+ P ++A+TH+ I+ Sbjct: 149 IRNGLGRVVADSVDELKLIERVYAELAAERVAEGEEPYAPVPVLIRITPGVHASTHESIA 208 Query: 164 TGKKEDKFGIPIH------------------------QIHSLYAYASTLPGVKISGVDMH 199 T ++ KFG+ + A + + G+ H Sbjct: 209 TAHEDQKFGMSLQLGTAALAGLEEAEMEHWGVEATDSYAALAAAILNATDSLDFRGIHCH 268 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-- 256 IGSQI + E F +A + + R G + +D+GGG GI Y P S ++ Sbjct: 269 IGSQIFEAEGFEQAATTALEFMNRLNRDLGVTLPELDLGGGYGIGYTEADHPRSITEVTE 328 Query: 257 -----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK---------SADKTFV 302 + + G + EPGR + G + V +IK + +V Sbjct: 329 SIAASVAATCERLGMAIPHMSFEPGRSISGPSGATLYTVGTIKNVSIEDENGEIRVRRYV 388 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPR 361 +D M+D RP LY++ + + N A + + +VG CE+GD + + + Sbjct: 389 SVDGGMSDNARPVLYESDY-SVTLANRAPAGEQVLSRVVGKHCESGDVVVRYCYLPADLQ 447 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQF-HIIRPRMTFQELIELD 414 GD+L + TGAY V YN P I + ++ R ++++ LD Sbjct: 448 AGDILAVPATGAYCYVLGSNYNFLTRPPVIATAEGKPSRVMIRRQREEDMLALD 501 >gi|325854990|ref|ZP_08171706.1| diaminopimelate decarboxylase [Prevotella denticola CRIS 18C-A] gi|327313297|ref|YP_004328734.1| diaminopimelate decarboxylase [Prevotella denticola F0289] gi|325483968|gb|EGC86908.1| diaminopimelate decarboxylase [Prevotella denticola CRIS 18C-A] gi|326946186|gb|AEA22071.1| diaminopimelate decarboxylase [Prevotella denticola F0289] Length = 385 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 129/370 (34%), Positives = 187/370 (50%), Gaps = 7/370 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSN-AFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TPFY Y + + D +V YA+KAN+N V+K ++ G G D V Sbjct: 11 KHIDTPFYYYDCNLLRETLQAIHEEVRTHADFIVHYAVKANANAKVLKIISQAGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+RR L + PA IV++GVGK EI+L L I+CFNVES +EL+ +N A G Sbjct: 71 SGGEIRRCLDSGFPAGSIVYAGVGKADWEINLGLDHDIFCFNVESVAELEVINSLAARKG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A + FR+NPD+ A+THK I+TG E+KFGI + + A + ++ G+ HIG Sbjct: 131 KVANVCFRINPDVGAHTHKMITTGLAENKFGIAMQDMVPAIREAERMANIRFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG--GLGIAYHSDHRPPSSSDYASL 259 SQI + + + ++ L ++I+VGG G+ P Y Sbjct: 191 SQILDMTDYRHLCSRINEIQNGLEEQDIRAENINVGGGLGIDYTQPDSKAVPDFKAYFYT 250 Query: 260 I-HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 K+ E GR +V +G L+T+ + +K+ K F I+D M D +RP LY Sbjct: 251 FARYLKLREGQKLHFELGRAVVGQMGSLITRTLYVKQGTAKQFAIVDAGMTDLIRPALYH 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A HEI N + D D+VGPICE+ D A + + GDL+ + GAYG + Sbjct: 311 ARHEIE---NLSSDGPEQIYDVVGPICESSDVFAKDIPLNTVHRGDLIALRSAGAYGEIM 367 Query: 379 SGTYNSRLLI 388 + YN R L Sbjct: 368 ASQYNCRRLP 377 >gi|168229736|ref|ZP_02654794.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470577|ref|ZP_03076561.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194456941|gb|EDX45780.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335840|gb|EDZ22604.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 465 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 103/443 (23%), Positives = 189/443 (42%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V K+ + ++ + + + Y + Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDTWIK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 442 DKNGETRLIRREDSYEDMVKYDI 464 >gi|224583151|ref|YP_002636949.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467678|gb|ACN45508.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 465 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 102/443 (23%), Positives = 187/443 (42%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F+ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQQKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 + V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMTYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQNFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V K+ + ++ + + + Y + Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDAWVK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 442 DKNGETRLIRREDSYEDMVKYDI 464 >gi|167549634|ref|ZP_02343393.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325203|gb|EDZ13042.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 465 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 106/443 (23%), Positives = 191/443 (43%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +++T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVILT 321 Query: 289 KVIS-----IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD---- 339 +V ++ D L D+ H + R+ + D Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTVAHDAWIK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 442 DKNGETRLIRREDSYEDMVKYDI 464 >gi|16761285|ref|NP_456902.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141019|ref|NP_804361.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412743|ref|YP_149818.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|168242485|ref|ZP_02667417.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168817903|ref|ZP_02829903.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445823|ref|YP_002041624.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194447678|ref|YP_002046416.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197247933|ref|YP_002147321.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197361677|ref|YP_002141313.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|204929227|ref|ZP_03220370.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213161327|ref|ZP_03347037.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426984|ref|ZP_03359734.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213621623|ref|ZP_03374406.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213852682|ref|ZP_03382214.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238912361|ref|ZP_04656198.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289827480|ref|ZP_06546092.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25512762|pir||AF0801 probable amino acid decarboxylase STY2590 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503584|emb|CAD07592.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi] gi|29136644|gb|AAO68210.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127000|gb|AAV76506.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194404486|gb|ACF64708.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194405982|gb|ACF66201.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197093153|emb|CAR58597.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197211636|gb|ACH49033.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204321771|gb|EDZ06970.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205338587|gb|EDZ25351.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344959|gb|EDZ31723.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086795|emb|CBY96567.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322617105|gb|EFY14011.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617589|gb|EFY14488.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624781|gb|EFY21610.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630331|gb|EFY27101.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634511|gb|EFY31244.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639222|gb|EFY35914.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640085|gb|EFY36752.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645695|gb|EFY42219.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652059|gb|EFY48422.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656231|gb|EFY52528.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659383|gb|EFY55630.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665843|gb|EFY62026.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669918|gb|EFY66059.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673903|gb|EFY70000.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678662|gb|EFY74718.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683543|gb|EFY79557.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687618|gb|EFY83588.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193547|gb|EFZ78752.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198454|gb|EFZ83556.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204566|gb|EFZ89569.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208496|gb|EFZ93435.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213633|gb|EFZ98422.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218331|gb|EGA03041.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222914|gb|EGA07263.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224511|gb|EGA08793.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232326|gb|EGA16429.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235640|gb|EGA19724.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241200|gb|EGA25236.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244942|gb|EGA28944.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250061|gb|EGA33955.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253845|gb|EGA37670.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254982|gb|EGA38773.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259831|gb|EGA43463.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264148|gb|EGA47655.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270846|gb|EGA54284.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 465 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 103/443 (23%), Positives = 189/443 (42%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V K+ + ++ + + + Y + Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDAWIK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 442 DKNGETRLIRREDSYEDMVKYDI 464 >gi|325104209|ref|YP_004273863.1| diaminopimelate decarboxylase [Pedobacter saltans DSM 12145] gi|324973057|gb|ADY52041.1| diaminopimelate decarboxylase [Pedobacter saltans DSM 12145] Length = 391 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 127/375 (33%), Positives = 191/375 (50%), Gaps = 7/375 (1%) Query: 19 EKLAHVV---QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + +TPFY Y +++ + +A V +A+K+N N+ V+ + +G Sbjct: 7 SAIVEKFVGKETPFYYYDMGLLQQTLKSCKDASSKYGFHVHFAVKSNFNKRVLSAIKEIG 66 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G D VS GE+ RA+ IVF+GVGK+ EI+LAL + I+CFNVES EL+ +N+ Sbjct: 67 FGADCVSGGEVSRAIETGFTNNDIVFAGVGKSDAEINLALDNDIFCFNVESVHELEVINE 126 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A GKKA +A RVNP+++A+TH I+TG E+KFG+ + + +K G Sbjct: 127 LAGKKGKKASVAIRVNPNVDAHTHHYITTGLDENKFGVNSWDLPKIVDTLKASENIKFLG 186 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP---PS 252 V H+GSQI + F + ++ Q G ++ ++VGGGLG+ YH Sbjct: 187 VHFHVGSQITDMNVFKSLCVKVNEIQQWFEERGVTVKVLNVGGGLGVDYHHPDEHSVADF 246 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 + + ++ E GR LVA L+TKV+ +K K FV++D M + M Sbjct: 247 ETYFKIFNDFLEVKPHQEVHFELGRALVAQSASLITKVLYLKHGIKKDFVVVDAGMTELM 306 Query: 313 RPTLYDAYHEINYIVNPAGD-RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 RP LY AYH+I I + D+VGPICE+ D ++ GDL+ + Sbjct: 307 RPALYQAYHKIENISYLDDQTKATKPYDVVGPICESSDCFGKEVELVEASRGDLIALRTA 366 Query: 372 GAYGAVQSGTYNSRL 386 GAYG V + YN R Sbjct: 367 GAYGEVMASFYNLRP 381 >gi|161502495|ref|YP_001569607.1| hypothetical protein SARI_00539 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863842|gb|ABX20465.1| hypothetical protein SARI_00539 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 465 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 103/443 (23%), Positives = 189/443 (42%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V K+ + ++ + + + Y + Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRITAAHDAWIK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 442 DKNGETRLIRREDSYEDMVKYDI 464 >gi|168237385|ref|ZP_02662443.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735492|ref|YP_002115431.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710994|gb|ACF90215.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289617|gb|EDY28980.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 465 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 103/443 (23%), Positives = 189/443 (42%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRRLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V K+ + ++ + + + Y + Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDAWIK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 442 DKNGETRLIRREDSYEDMVKYDI 464 >gi|168261617|ref|ZP_02683590.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|197265590|ref|ZP_03165664.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197243845|gb|EDY26465.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205349442|gb|EDZ36073.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 465 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 103/443 (23%), Positives = 189/443 (42%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V K+ + ++ + + + Y + Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDAWIK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 442 DKNGETRLIRREDSYEDMVKYDI 464 >gi|237801879|ref|ZP_04590340.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024737|gb|EGI04793.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 419 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 107/397 (26%), Positives = 172/397 (43%), Gaps = 16/397 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L++L + TPF+ Y AI + + + AF +A+KA A++ L GSG Sbjct: 15 LDELTNTYPTPFHIYDERAIVQTHRHVAQAFADSAFRQYFAVKALPTPAILSLLLKEGSG 74 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD S EL A + IVF+ ++ E +ALQ+G + Sbjct: 75 LDCSSPVELMLAKRLGARGDDIVFTSNNTSLSEYQMALQAGALITFDDRSM--------L 126 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + I ++ KFGIP ++ Y A + Sbjct: 127 EQVVALPDIVAFRVSPHGVIARSSQMGNAQQSKFGIPEAELVQSYREAWDRGARRFGIHG 186 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 M +++ + +++ + R +++I++GGGLGI Y D + + YA Sbjct: 187 MMCANELSLEAAVQAGVQVIEVGARVAREASIELEYINIGGGLGIPYRIDDQALDLTAYA 246 Query: 258 ----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + Q F + K+++E GR++ G+LV++VI + S + V LD +M+ MR Sbjct: 247 DALKRALKQAFPHNTPKLLMELGRYISGPHGVLVSRVI-NRCSKGREIVGLDASMSALMR 305 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P LY AYH + + A R D+VG +CE D A++R + P GDL I TGA Sbjct: 306 PGLYGAYHHLT--LPFADQRPEGVFDVVGALCENFDKFAVDRPLPSPLIGDLALIHDTGA 363 Query: 374 YGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQE 409 +G TYN RL E+M+ + IR TF + Sbjct: 364 HGHAMGFTYNGRLRPAELMLTDDGDIVEIRRAETFDD 400 >gi|10640067|emb|CAC11919.1| diaminopimelate decarboxylase related protein [Thermoplasma acidophilum] Length = 436 Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats. Identities = 106/403 (26%), Positives = 158/403 (39%), Gaps = 19/403 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 +S++++A TP YS I N A++ + Y++KAN N +I+ + Sbjct: 48 SISGMSIDEMAKKYGTPVIIYSRARIVSNIRRIREAYE-NRVRMLYSVKANDNPRIIEIM 106 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G D S E+ ++ + +P E I++S + +++ AL GI Sbjct: 107 HQESIGSDSASPMEIMMSIFSGIPPEDILYSPNNASEYDLNFALDRGIAIN-------FN 159 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 T Q K I+FR+NP +TG KFGI Y A Sbjct: 160 TFTQYRKMREKPERISFRINPGFGMGEFAGTTTGGARTKFGIDPDAAILAYRKAREDGIR 219 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + M + D ++ R + R G + Q DVGGGLGI Y Sbjct: 220 EFGIHMMIGSNNRDHVKIAEAYSNFFRIADRIGREAGVSFQFADVGGGLGIPYVQGENEL 279 Query: 252 SSSDYASLI-HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + S + ++ ++LEPGR+LV D GI+V V + F D+ MN Sbjct: 280 DIAALGSAVLKEFDRYHFGDLVLEPGRYLVGDAGIIVGTVNDVHNG----FAGTDIGMNL 335 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 +RP LY A H I + + G ICE D I GD + + Sbjct: 336 NIRPALYGARHTIIPVGERV---EGEKITVTGQICENTDRIGDTAW--RLSEGDRIMVLD 390 Query: 371 TGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GAY S YN R PEIM+ + +IR R F + I Sbjct: 391 AGAYVYSMSSRYNGRPRPPEIMIMEDGKDVMIRRREDFSDFIA 433 >gi|257482668|ref|ZP_05636709.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|401153|sp|P31851|TABA_PSESZ RecName: Full=Protein tabA gi|151571|gb|AAB41802.1| Homology with E.coli and P.aeruginosa lysA gene; product of unknown function; putative [Pseudomonas syringae] gi|331013522|gb|EGH93578.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 420 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 108/397 (27%), Positives = 173/397 (43%), Gaps = 16/397 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L++L + TPF+ Y AI + + + AF +A+KA A++ L GSG Sbjct: 15 LDELTNTYPTPFHIYDERAIVQTHRNVAQAFADSAFRQYFAVKALPTPAILSLLLKEGSG 74 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD S EL A + IVF+ ++ E +ALQ+G + Sbjct: 75 LDCSSPVELMLAERLGARGDDIVFTSNNTSLSEYQMALQAGALVTFDDRSM--------L 126 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + I ++ KFGIP ++ Y A + Sbjct: 127 EQVIALPDIVAFRVSPHGVIARSSQMGNAQQSKFGIPEAELVQSYREAWDRGARRFGIHG 186 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 M +++ + +++ + R G +++I++GGGLGI Y D + + YA Sbjct: 187 MMCANELSLEAAVQAGVQVIEVGARVAREAGIELEYINIGGGLGIPYRIDDQALDLTAYA 246 Query: 258 ----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + Q F + K+++E GR++ G+LV++VI + S + V LD +M+ MR Sbjct: 247 DALKRALKQAFPHNTPKLLMELGRYISGPHGVLVSRVI-NRCSKGREIVGLDASMSALMR 305 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P LY AYH + + A R D+VG +CE D A++R + P GDL I TGA Sbjct: 306 PGLYGAYHHLT--LPFADQRPEGVFDVVGALCENFDKFAVDRLLPSPLIGDLALIHDTGA 363 Query: 374 YGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQE 409 +G TYN RL E+M+ + IR TF + Sbjct: 364 HGHAMGFTYNGRLRPAELMLTDDGDVVEIRRAETFDD 400 >gi|62180932|ref|YP_217349.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128565|gb|AAX66268.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715411|gb|EFZ06982.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 465 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 103/443 (23%), Positives = 189/443 (42%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQNFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V K+ + ++ + + + Y + Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDAWVK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYAIESQTVYNNRPRTGVVMI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 442 DKNGETRLIRREDSYEDMVKYDI 464 >gi|200386842|ref|ZP_03213454.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199603940|gb|EDZ02485.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 465 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 107/443 (24%), Positives = 190/443 (42%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVIS-----IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD---- 339 +V ++ D L D+ H + R+ D Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAVHDAWIK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPRETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 442 DKNGETRLIRREDSYEDMVKYDI 464 >gi|313156978|gb|EFR56410.1| diaminopimelate decarboxylase [Alistipes sp. HGB5] Length = 386 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 115/379 (30%), Positives = 187/379 (49%), Gaps = 8/379 (2%) Query: 19 EKLAHV---VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 ++A +TPFY Y T + + + V YA+KAN + ++ + G Sbjct: 4 RQIAQKLRGYETPFYLYDTALLRQTLESVVYESKKYGYKVHYAIKANYDDHLLAIIREYG 63 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G+D S ELR+A+ A + IV++G+GK E+ A+ I N ES EL+ +++ Sbjct: 64 LGIDCASGNELRKAVEAGFDPKGIVYAGIGKRDKELRYAIGQEIMAINCESIEELELVDR 123 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A GKK +A R+NPDI+ T+ I TG+ + KFGI ++ +L + I G Sbjct: 124 LAGEAGKKTDVALRINPDIDPKTNHCIDTGQADSKFGISYEEVLEHAKEIKSLKHINIVG 183 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG--GLGIAYHSDHRPPSS 253 + +HIGSQI ++ F + + + L G + + +DVGG G+ + P+ Sbjct: 184 IHLHIGSQIRELHVFENMCNKVNVIVENLEKLGFSFRFVDVGGGLGVNYDVPENEPIPNF 243 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS-ADKTFVILDVAMNDFM 312 + S++H + ++ E GR +VA+ G L+T V+ K + + VI+D +M + + Sbjct: 244 ASLFSIVHNHLAVGDREVHFEFGRSIVAECGELITTVLFNKTTATGRKLVIVDASMTELI 303 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 RP LY +YH I I + D + IVG CE+ D N + R GDLL ++ G Sbjct: 304 RPALYGSYHNIENIT--SEDEVREKYTIVGTACESTDVFDENVTLRKTRRGDLLTLKSAG 361 Query: 373 AYGAVQSGTYNSRLLIPEI 391 AYG + YN L + Sbjct: 362 AYGMSMASRYNLHDLPGAV 380 >gi|16765687|ref|NP_461302.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993048|ref|ZP_02574143.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16420903|gb|AAL21261.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205328829|gb|EDZ15593.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247566|emb|CBG25393.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994461|gb|ACY89346.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158918|emb|CBW18431.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913351|dbj|BAJ37325.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222938|gb|EFX48009.1| Diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130692|gb|ADX18122.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989293|gb|AEF08276.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 465 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 103/443 (23%), Positives = 188/443 (42%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V K+ + ++ + + + Y + Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDAWIK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + +IR +++++++ D Sbjct: 442 DKNGDTRLIRREDSYEDMVKYDI 464 >gi|289583356|ref|YP_003481766.1| diaminopimelate decarboxylase [Natrialba magadii ATCC 43099] gi|289532854|gb|ADD07204.1| diaminopimelate decarboxylase [Natrialba magadii ATCC 43099] Length = 457 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 108/431 (25%), Positives = 184/431 (42%), Gaps = 22/431 (5%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYA 58 M E L E L +P Y + I NY T +A D D+ + +A Sbjct: 28 MDLTHRRERLLEHE----AALCAPHDSPVYVFYEDDIRDNYRTLRSALDEHYPDSTIHFA 83 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN N A++ L G ++ + GEL A A A+ ++ +G+ + ++I+ AL++G Sbjct: 84 VKANYNPAILSILRDEGCHAEVYARGELAAAQTAGYDADDLLLTGMNRRPEDIERALETG 143 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + F V++ +EL+ L A + + R NP + TH +++T E KFG+ I Sbjct: 144 VGHFLVDNATELERLVAAARKTDVRPRVLIRCNPSMEVPTHPEVATATLETKFGLDIDSG 203 Query: 179 HSL--YAYASTLPGVKISGVDMHIGSQIDQIESF-HKAFKLLRDLTQQLRSNGHNIQHID 235 ++ A + ++G+ +HIGSQI E + A + G I +D Sbjct: 204 RAMAVTEKAVAAEEIDLAGIQLHIGSQIQSAEPYGVAARDMCAFAVDIRDELGVEIDVLD 263 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQ-----YFGNLQCKIILEPGRFLVADVGILVTKV 290 +GGGL + Y D P + + + LEPGR LV + G L+ +V Sbjct: 264 LGGGLPVPYDDDVPAPETIIETIATNVKDSLSATDMSLPTLFLEPGRRLVGNAGTLLARV 323 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 +K++ TF +LD N Y Y + + GP+C +GD Sbjct: 324 GVVKETPYATFAVLDAGTNTVSSYWPYPIY-------ALSEAEPTESYHLAGPLCYSGDV 376 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 +A + + GD + I++ GAY + N++ P +++ IR + +E Sbjct: 377 LAEDVSLPPLERGDTIAIDRIGAYSLGSASHTNAQPKPPIVLLRSNGDVETIRQPESVEE 436 Query: 410 LIELDSIPAWL 420 +I P L Sbjct: 437 IIGNAQQPEDL 447 >gi|322368446|ref|ZP_08043015.1| diaminopimelate decarboxylase [Haladaptatus paucihalophilus DX253] gi|320552462|gb|EFW94107.1| diaminopimelate decarboxylase [Haladaptatus paucihalophilus DX253] Length = 425 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 94/418 (22%), Positives = 178/418 (42%), Gaps = 18/418 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGS 76 + L +P Y + + NY T +A D ++ V +A+KAN N V+ L G Sbjct: 15 DDLVSAYGSPLYAFFEDDLRANYGTLRDALDEQYPNSEVHFAVKANYNLGVLSVLRDAGC 74 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 + + EL A E ++ +G+ + ++I+ AL G+ V++ +EL+ + Sbjct: 75 KAEAYARCELTATRRAGFDPEDVLLTGMNRAPEDIERALDWGVSHLLVDNATELEKILVA 134 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY--AYASTLPGVKIS 194 A + + R NP + TH +++T +E KFG+ I ++ A V ++ Sbjct: 135 AEATETVPDMLIRGNPAMEVPTHPEVATATRESKFGLDIESGRAMAVARQAVESEFVSLA 194 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 GV +H+GSQI +E + A + + +R + GG + + P + + Sbjct: 195 GVQLHVGSQIRGVEPYGVAGREMLGFAADVRDELGVEIDVLDLGGGFPVPYDEDVPDTET 254 Query: 255 DYASLIHQYFGNL------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 A + + ++ +EPGR LV + G + V +K++ F +LD Sbjct: 255 IVAHMAETIRETCAQYDLDEPRLFVEPGRRLVGNAGTFLGTVGVVKETPYADFAVLDGGT 314 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 N Y Y + GP+C +GD ++ + + PGDL+ + Sbjct: 315 NAVSSYWPYPVY-------AVKDREPTRTYHVAGPLCYSGDVLSEDVPLPELGPGDLVAV 367 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDSIPAWLQKTPK 425 ++ GAY + N+ P ++V + ++R R + +++ DSIP L + Sbjct: 368 DRIGAYSLGSASHTNAEPKPPVVLVRSDGGYDLLRKRESCDDVLGNDSIPEGLGDERQ 425 >gi|291513977|emb|CBK63187.1| diaminopimelate decarboxylase [Alistipes shahii WAL 8301] Length = 387 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 105/378 (27%), Positives = 173/378 (45%), Gaps = 5/378 (1%) Query: 19 EKLAHV---VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 ++A +TPFY Y + + + V YA+KAN + ++ + G Sbjct: 4 RQIASKLRGYETPFYLYDMALLRQTLESVVYESKKYGYKVHYAIKANYDDHLLAVIREYG 63 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G+D S ELR+A+ A + IV++GVGK E+ A++ I N ES EL+ ++ Sbjct: 64 LGIDCASGNELRKAVEAGFDPKGIVYAGVGKRDKELKYAIEQNILAINCESIQELELVDA 123 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + GK IA R+NPDI+ T+ I TG+ + KFGI ++ A +L V I G Sbjct: 124 LSAEAGKVTDIALRINPDIDPKTNHCIDTGQADSKFGISYEEVLEHAAEIRSLKNVNIIG 183 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG--GLGIAYHSDHRPPSS 253 + +HIGSQI ++ F + + + L G + +DVGG G+ + P+ Sbjct: 184 LHLHIGSQIRELHVFENMCNKVNVIVENLEKLGCKFRFVDVGGGLGVNYDVPENEPIPNF 243 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + S++H + ++ E GR +VA+ G L+T V+ K +A +++ A + Sbjct: 244 ASLFSIVHNHLRIGDREVHFEFGRSIVAECGELITTVLFNKTTATGRKLVIVDASMTELV 303 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + + D + +VG CE+ D N + GDLL I+ GA Sbjct: 304 RPAMYGSYHNIENITAKDDEVREKYTVVGTACESTDVFDENVTLRRTHRGDLLTIKSAGA 363 Query: 374 YGAVQSGTYNSRLLIPEI 391 YG + YN L + Sbjct: 364 YGMSMASRYNLHDLPGAV 381 >gi|330792841|ref|XP_003284495.1| hypothetical protein DICPUDRAFT_45522 [Dictyostelium purpureum] gi|325085525|gb|EGC38930.1| hypothetical protein DICPUDRAFT_45522 [Dictyostelium purpureum] Length = 423 Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 91/418 (21%), Positives = 169/418 (40%), Gaps = 15/418 (3%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKAN 62 + L+ ++K +++ TPF+ Y+ I +N + F + +A+KA Sbjct: 7 EVLNKELNFNIEDIKKASNLYPTPFHFYNGDKIVENGKSLMTNFQQYFPNYKNYFAVKAT 66 Query: 63 SNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N +++K L G G+D S EL + E I+F+ +E A + G Sbjct: 67 PNPSILKILKEQTGMGVDCSSLAELLLSEKVGFKGEEIMFTSNNTKENEYKKAYELGAII 126 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 + + + + + P + I K+ KFG+ + + Sbjct: 127 NLDDITQIEYLYSSLGNVMPELLSFRYNPGP---LKSGNDIIGNPKDAKFGLTGDDLQNA 183 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 Y A L + M +++D A L + + G + +++GGG+G Sbjct: 184 YNKAKELGVKRFGLHCMVASNELDIDYFEETARLLFSTVATLSKQCGIQFEMVNLGGGIG 243 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISIK 294 I Y + I++ + Q ++ E GR + G L+T+ I K Sbjct: 244 IPYRPHQVAVNYQKLTERIYKAYKELILDAGLPQMNVVTECGRVITGPYGALITRAIHSK 303 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 S K ++ +D M D MRP +Y+AYH +++P D+VG +CE D ++ Sbjct: 304 -STYKEYIGVDACMADLMRPGMYNAYHH-VTVIDPKDPSKLKQYDLVGSLCENNDKFCVD 361 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 R + DL+ I +GA+G YN +L E ++ ++ +IR T+++L Sbjct: 362 RTLPEINRNDLIVIHDSGAHGHSMGFNYNGKLRSAEYLLLNNEIKLIRRAETYEDLFA 419 >gi|237797832|ref|ZP_04586293.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020682|gb|EGI00739.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 324 Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 152/322 (47%), Positives = 205/322 (63%), Gaps = 1/322 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AE+IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQDVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L L +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLQLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y + PP ++DY + + ++ EPGRF+VA+ G+L+++V +K + K Sbjct: 241 GVRYRDE-EPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGVLLSRVEYLKHTEHKD 299 Query: 301 FVILDVAMNDFMRPTLYDAYHE 322 F I+D AMND +RP LY A+ + Sbjct: 300 FAIVDAAMNDLIRPALYQAWMD 321 >gi|205353474|ref|YP_002227275.1| amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273255|emb|CAR38219.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628567|gb|EGE34910.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 465 Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 102/443 (23%), Positives = 188/443 (42%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V K+ + ++ + + + Y + Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDAWVK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R + + Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVRI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 442 DKNGETRLIRREDSYEDMVKYDI 464 >gi|304404706|ref|ZP_07386367.1| Orn/DAP/Arg decarboxylase 2 [Paenibacillus curdlanolyticus YK9] gi|304346513|gb|EFM12346.1| Orn/DAP/Arg decarboxylase 2 [Paenibacillus curdlanolyticus YK9] Length = 426 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 105/400 (26%), Positives = 183/400 (45%), Gaps = 9/400 (2%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 +++ TP Y Y + +E+ + F + Y+ K N + + L G Sbjct: 14 IQQAVERFGTPLYLYDASVVEQKVNELRSCFPE-QAELFYSFKCNPLVGMAQLLLRQGCR 72 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +++ S GEL AL A IVF+ GKT++E+ LA++ GIYC NVE+ +E+ ++Q A Sbjct: 73 VEVASGGELTAALHAGCDPRNIVFTSPGKTVEELQLAIRKGIYCINVENMAEIGLVDQIA 132 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G IA R+NPD I +FG+ + A + V++ G Sbjct: 133 AEQGLTVDIAIRINPDEPQQHAASIKMSGVPSQFGMDPTYLPEAIETAQRMSNVRLIGFH 192 Query: 198 MHIGSQIDQIES-FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +++G+QI Q ++ + +R G +Q +D+GGG G+ Y + Sbjct: 193 IYLGTQILQADAIIRHFDQSIRTAVDLADRFGLELQFLDIGGGFGVPYFPKETALDLASL 252 Query: 257 ASLIHQYFGNL-----QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 I Q + ++ +E GRFL+A+ G+ V+KV+ K+S +VI D + Sbjct: 253 REGIMQVWQEWESRLANTRLAIESGRFLMAESGVFVSKVLYTKESKGSRYVIGDGGSHQH 312 Query: 312 MRPTLYDAYHEINYIVNPAGDRL-HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 Y N+ + G+ + GP+C + D I + + PGDL+ +EK Sbjct: 313 ASSAFLGRYIRSNFPMRVIGEGDGEHEVTVTGPLCTSTDVIGNKVNLPIAAPGDLVVVEK 372 Query: 371 TGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 +GAYG S T + S + E++ + ++ ++R R F + Sbjct: 373 SGAYGLTHSPTMFLSHPMPAEVLFDQDRYWVLRERGQFSD 412 >gi|326800566|ref|YP_004318385.1| diaminopimelate decarboxylase [Sphingobacterium sp. 21] gi|326551330|gb|ADZ79715.1| diaminopimelate decarboxylase [Sphingobacterium sp. 21] Length = 392 Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 121/377 (32%), Positives = 186/377 (49%), Gaps = 10/377 (2%) Query: 19 EKLAHVVQ---TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + + TPF+ Y ++ D + YALKAN N+ V++ + G Sbjct: 4 RDIIAAFEQKETPFFYYDLQLLQATIDNALTEADKYKFHIHYALKANFNERVLQIIQESG 63 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G D VS E+ +A+ ++IVF+GVGK EI AL I+ FNVES EL + Sbjct: 64 IGADCVSGNEVLKAVETGFSPDKIVFAGVGKADKEIIAALHHDIFAFNVESVQELCVIGD 123 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A GK A +A R+NP+++A THK I+TG E+KFGI +++ +++ G Sbjct: 124 LAKKEGKVAKVALRINPNVDAKTHKYITTGLDENKFGIKTWELNECLDVIRNFDSLELIG 183 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP---S 252 + H+GSQ+ + F + + G+ ++ ++VGGGLG+ Y P Sbjct: 184 LHFHVGSQVVDLNVFKSLCVKVNEFNNWFDERGYRLKVLNVGGGLGVNYTDPDGEPIVDF 243 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 + + ++ E GR LVA G L++KV+ +K K F+ILD M + M Sbjct: 244 KRYFEIFDQFLERKGEQEVHFELGRALVAQSGSLISKVLYVKNGIKKHFLILDAGMTELM 303 Query: 313 RPTLYDAYHEINYIVNPAGDRLH----IHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 RP LY AYH+I ++ ++ D+VGPICE+ D ++ + GDL+ I Sbjct: 304 RPALYQAYHKIEHLSAKQLSEETRDGSVNYDVVGPICESTDCFGKEVELPESKRGDLIAI 363 Query: 369 EKTGAYGAVQSGTYNSR 385 TGAYG V + YN R Sbjct: 364 RTTGAYGEVMASKYNLR 380 >gi|268317211|ref|YP_003290930.1| aspartate kinase [Rhodothermus marinus DSM 4252] gi|262334745|gb|ACY48542.1| aspartate kinase [Rhodothermus marinus DSM 4252] Length = 878 Score = 195 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 107/379 (28%), Positives = 166/379 (43%), Gaps = 16/379 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA Q P Y Y + +D + YALKAN + V++ G G Sbjct: 495 LLALAEA-QAPCYVYDEGTLRGQLEALRR-LSSVD-RIFYALKANDHPDVLRVFHEAGLG 551 Query: 78 LDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 + VS GEL ER++F+ DE + G + + Sbjct: 552 FECVSAGELEHVRTLFPELAPERLLFTPNFAPADEYRRGFELGAFVTLDNLH-----PLE 606 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 L + + R +P H+ + T + KFGI Q L A L +I G Sbjct: 607 AWPELFRNRNVLVRFDPGRGDGHHRYVRTAGAQSKFGIAPAQAKRLRELADRLGL-RIVG 665 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + H+GS I + L + + +++++DVGGGLG+ + Sbjct: 666 LHAHVGSGIL---LPETWAETALFLAELAETYFPDVRYLDVGGGLGVPERTGAPGLDLEA 722 Query: 256 YASLIHQYFG-NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + +H++ + + ++ LEPGRFLVA+ G+L+ +V +K+ + ++ MN +RP Sbjct: 723 VEAHLHRFKTAHPRFELWLEPGRFLVAEAGVLLARVTQVKEKGGARYAGVETGMNSLIRP 782 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 LY AYHEI + D+VGPICETGD + R++ R GD+L I + GAY Sbjct: 783 ALYGAYHEIVNLTRLDAPA-TQTVDVVGPICETGDVLGHGRRLPDTREGDVLLIAQAGAY 841 Query: 375 GAVQSGTYNSRLLIPEIMV 393 GAV S YN R E+ + Sbjct: 842 GAVMSSHYNRRPPAREVFL 860 >gi|320354419|ref|YP_004195758.1| diaminopimelate decarboxylase [Desulfobulbus propionicus DSM 2032] gi|320122921|gb|ADW18467.1| diaminopimelate decarboxylase [Desulfobulbus propionicus DSM 2032] Length = 418 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 93/403 (23%), Positives = 157/403 (38%), Gaps = 18/403 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLGS 76 L + TPF+ Y I + AF + YA+KA N +V+ + +G Sbjct: 15 LPAIVAHYGTPFHIYDEAGIRETGRRLKAAFADIPEFREYYAVKALPNPSVLAIMQDMGF 74 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL A + I+F+ + ++ A G N++ + + + Sbjct: 75 GFDCSSITELMLARELGAKPDDIMFTSNNTSAEDFAAAAADGGCILNLDDITLIDKVPTM 134 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + R T I +E K+G+ QI Y A + Sbjct: 135 PELVCFRYNPGRRR-------TGNDIIGKPEEAKYGVSHEQIVEAYRLAQARGAKRFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M +++ A LL + + G + I++GGGLGI Y D P + Sbjct: 188 TMLASNELHYSYMVQTAAMLLELVETISKELGITFEFINIGGGLGIPYLPDIDPLNIEAM 247 Query: 257 ASLIHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 I + +E GR++ G LV + I+ K +T++ +D M+ Sbjct: 248 GEEITALFVDFKDHHGYCPALYMESGRYMTGPHGALVVRAINRKDI-YRTYIGVDACMSA 306 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LY AYH I + G+ D+VG +CE D A+ R + GD+L I+ Sbjct: 307 LMRPALYGAYHHIEVLGKEGGE--METVDVVGSLCENNDKFAVQRPLPRITDGDILIIQD 364 Query: 371 TGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 +GA+G YN ++ E+++ +IR ++ Sbjct: 365 SGAHGHAMGFNYNGKMRPQELLLGKDGVVRMIRREERPEDYFA 407 >gi|255532226|ref|YP_003092598.1| diaminopimelate decarboxylase [Pedobacter heparinus DSM 2366] gi|255345210|gb|ACU04536.1| diaminopimelate decarboxylase [Pedobacter heparinus DSM 2366] Length = 384 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 131/361 (36%), Positives = 190/361 (52%), Gaps = 4/361 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPFY Y ++ +NA + V YALKAN N AV+K + +G G D VS GE+ Sbjct: 15 TPFYYYDLNLLQNTLNACANAAKLYNFHVHYALKANFNPAVLKKVKAIGFGADCVSGGEV 74 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 RA+ +++VF+GVGK+ EI+LAL I+CFNVES EL+ +N+ A GK A I Sbjct: 75 NRAIETGFNPKQVVFAGVGKSDKEINLALDQDIFCFNVESVQELEVINELAGKKGKIAKI 134 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A R+NP+++A+TH I+TG E+KFG+ + ++ G+ HIGSQI Sbjct: 135 AIRINPNVDAHTHHNITTGLDENKFGVNSWDLPKCVETLKVSEHLEFLGIHFHIGSQITN 194 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYF 264 ++ + + + G N++ ++VGGGLGI YH+ + + Sbjct: 195 LDVYKNLCVRVNEFAIWFEERGFNVKILNVGGGLGIDYHNPEQQIPDFDAYFKIFSEFLE 254 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 ++ E GR LV L+++V+ IK K FV+LD M + MRP LY AYH+I Sbjct: 255 VKAGQEVHFELGRALVGQCASLISRVLYIKNGKKKNFVVLDAGMTELMRPALYQAYHKIE 314 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 + G++ + DIVGPICE+ D + GDL I GAYG V + YN Sbjct: 315 NLSR--GNQTTLKYDIVGPICESTDCFGKEVEQPESFRGDLYAIRSAGAYGEVMASKYNL 372 Query: 385 R 385 R Sbjct: 373 R 373 >gi|51246812|ref|YP_066696.1| diaminopimelate decarboxylase [Desulfotalea psychrophila LSv54] gi|50877849|emb|CAG37689.1| probable diaminopimelate decarboxylase [Desulfotalea psychrophila LSv54] Length = 419 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 101/403 (25%), Positives = 163/403 (40%), Gaps = 17/403 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLGS 76 L ++A TPF+ Y I++ AF G+D +A+KA N A++K + +G Sbjct: 15 LRQIADHYHTPFHIYDEAGIKQTGTRLKQAFSGIDGFREYFAVKALPNPAIMKIMQEMGF 74 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + + I+F+ + +E A + G N++ S + + + Sbjct: 75 GFDCSSVAELILSRKLGAKGDEIMFTSNNTSPEEFIAAAEDGGCILNLDDISLIAKVPKM 134 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 ++ + T I E K+G+ QI Y A + Sbjct: 135 PETICFRYNPG-------ERRTGNDIIGTPVEAKYGVSHEQIIEAYRLAKKAGAKRFGLH 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 M ++++ A LL + + I++GGGLGI Y + Sbjct: 188 TMLASNELNYSYMVQTAQMLLALVEKISAELDIKFDFINIGGGLGIPYQPEQNELDLESM 247 Query: 257 ASLIHQYF------GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 A I F + + +E GRF+ GILVT VI KK + +V +D MN Sbjct: 248 AREITAIFDLFKEKNDYCPALYMESGRFITGPHGILVTSVI-NKKEIYRDYVGVDACMNA 306 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 MRP LY +YH I + G D+ G +CE D A+ R + + GDLL I+ Sbjct: 307 LMRPALYGSYHHIEVLGKETG-ATTKKVDVAGSLCENNDKFAIQRDLPICENGDLLIIQD 365 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 TGA+G YN ++ E++ + +IR + Sbjct: 366 TGAHGHAMGFNYNGKMRPQELLFDSEGNTALIRREERLSDYFA 408 >gi|300785911|ref|YP_003766202.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] gi|299795425|gb|ADJ45800.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] Length = 431 Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats. Identities = 107/420 (25%), Positives = 179/420 (42%), Gaps = 12/420 (2%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 V + +LA TP + Y + L + Y+LKAN N +V Sbjct: 4 EFEISGVGIAELAERYGTPLFVYDGDELGGRLLGLREQL-HPRLEIFYSLKANPNISVCA 62 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 L G+ ++ S EL A A V E I+F G GK+ E+ L G+Y ES E Sbjct: 63 LLHAHGARAEVSSMAELITARRAGVAGEDIIFLGPGKSTSELAACLDEGVYTVVCESFGE 122 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 LK L++ A G +A +A RVNP K +FGI Q+ + P Sbjct: 123 LKILDELARERGIEARVALRVNPSFAVKGSGLTMG-GKPRQFGIDEEQLLAATDLVDRHP 181 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDH 248 +++ GV +++G++I E + + + +L +++ R G + +DVGGGLG+AY Sbjct: 182 NLRLMGVQVYMGTRILDEEPIVENTRRIFELAERVSRRLGFPLDMVDVGGGLGVAYFDGE 241 Query: 249 RPPSSSDYA-----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 R A + + ++++E GR+L A G V +V K S + F + Sbjct: 242 RDLDRDLLASLLNPVIDEFAQRHPATRLVMELGRYLAATSGTYVVRVRYTKTSLGQNFAV 301 Query: 304 LDVAMNDFMR---PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 D N M Y ++N + + GP+C D +A + Sbjct: 302 ADGGTNHHMAAVGIGSYVKRDFPIRLLNRIDEPATETWQVTGPLCTPNDVLAKKAALPPV 361 Query: 361 RPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 RPGDL+ + ++GAYG S + S E++V+ + +++ R +L+ + + Sbjct: 362 RPGDLVGVTRSGAYGPTASPVLFLSHGYPAEVIVHCGRHYLVSERDEPADLLRRQHLHEF 421 >gi|218517060|ref|ZP_03513900.1| diaminopimelate decarboxylase protein [Rhizobium etli 8C-3] Length = 294 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 173/293 (59%), Positives = 228/293 (77%), Gaps = 1/293 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y +G LHAENV + ++A V TPFY YST +E++Y FS AF MD+MVCYA+K Sbjct: 1 MNHFEYRDGILHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL LG+G+D+VSEGELRRALAA +PA RI+FSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ LNQRAVS GKKAP++FR+NPD++A TH KISTGKKE+KFGI + + Sbjct: 121 CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+ LPG++++G+DMHIGSQI +++ F AFKLLRDL LR++GH I H+D+GGGL Sbjct: 181 IYAHAAKLPGIEVTGIDMHIGSQITELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGL 240 Query: 241 G-IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 G ++ PP YA+++ +L CK+I EPGR +V + GILVT+V+ Sbjct: 241 GVPYKDDNNPPPLPDAYAAIVKNQLRDLNCKVITEPGRLIVGNAGILVTEVLY 293 >gi|168465929|ref|ZP_02699799.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195631146|gb|EDX49706.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 465 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 103/443 (23%), Positives = 189/443 (42%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V K+ + ++ + + + Y + Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDAWIK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVMMI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 442 DKNGETRLIRREDSYEDMVKYDI 464 >gi|325066828|ref|ZP_08125501.1| diaminopimelate decarboxylase [Actinomyces oris K20] Length = 486 Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 101/450 (22%), Positives = 178/450 (39%), Gaps = 43/450 (9%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--------MDTMVCYAL 59 +G L +++ ++ +P + + +++ A YA Sbjct: 36 DGELALGGLTVSEILAEAPSPVFVLDEADLRGRAASWAAAMHEEFWPSYGMAGGEAFYAG 95 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELR---------RALAAPVPAERIVFSGVGKTIDE 110 KA V + + G G+D S GEL A A R+ G GKT E Sbjct: 96 KAFLTTKVAQWVLEEGMGIDTSSRGELAVSLAALQEVDGEEATTDATRLGLHGNGKTQAE 155 Query: 111 IDLALQSGIYCFNVESESELKTL--------NQRAVSLGKKAPIAFRVNPDINANTHKKI 162 I +AL + ++S E+ + + R+ ++A H+ I Sbjct: 156 IAVALTHHVGHLVLDSLEEVDLAVRAVRELRASGVYGPEETGKVMVRLTTGVHAGGHEYI 215 Query: 163 STGKKEDKFGIPIHQIHSLYAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL 220 STG ++ KFG+ +H + A P +++ G+ HIGSQI + F +A ++ L Sbjct: 216 STGHEDQKFGLSVHGGAARRAIDAIIAAPELELHGLHSHIGSQILDLAGFREAVGIVLTL 275 Query: 221 TQQLR-SNGHNIQHIDVGGGLGIAYHSDHRPPSSS--------DYASLIHQYFGNLQCKI 271 ++ GH +D+GGG GIAY P S + + G+ + Sbjct: 276 RHKVAVDTGHLCPEVDLGGGYGIAYTGADPVPPSPAQVARTLAEAVRETCERLGDEVPTV 335 Query: 272 ILEPGRFLVADVGILVTKVISIKKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +EPGR + + + V +K+ + +V +D M+D +RP LY+A + Sbjct: 336 SIEPGRAVAGPTTVTLYTVTGLKRVELGEGASRLYVSIDGGMSDNIRPALYEAAYTALVA 395 Query: 327 VNPAGDRL-HIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNS 384 + + + +VG CE+GD + + + GD+L + TGAYG + YN Sbjct: 396 NRRPDPQAGLVRSRVVGKHCESGDVVVRDVDLPADLAVGDVLAVPATGAYGRSMASNYNL 455 Query: 385 RLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 V + + T ++LI L+ Sbjct: 456 FTRPGVRWVREGESDWVLRPETIEDLIRLE 485 >gi|325129406|gb|EGC52238.1| diaminopimelate decarboxylase [Neisseria meningitidis OX99.30304] Length = 342 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 154/343 (44%), Positives = 211/343 (61%), Gaps = 3/343 (0%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L E V +LA TP Y YS +A+ + + + AF ++ +VCYA+KAN N ++IK Sbjct: 3 LFCEQVPYPRLAEEFGTPLYVYSKSALTEAFENYQTAFATLNPLVCYAVKANGNLSIIKH 62 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A LGSG DIVS+GEL R LAA A + +FSGVGK+ EI+ AL +G+ CFN+ES E+ Sbjct: 63 FASLGSGFDIVSDGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + A LGK AP++ RVNPD++A TH ISTG K +KFGI Y +AS Sbjct: 123 DRIQKVAARLGKVAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHASRQSH 182 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +KI G+D HIGSQ+ + +A + + L QL G ++H+D+GGG+GI Y + Sbjct: 183 LKIVGIDCHIGSQLTDLSPLVEACERILVLVDQLADEGIVLEHLDLGGGVGIVYQDE-NV 241 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P YA + + G + K+ILEPGR LV + G L+T+V +K +K FV++D AMND Sbjct: 242 PDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMND 301 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 MRP LYDAYH I + D + A+IVGPICETGDF+ Sbjct: 302 LMRPALYDAYHHIEAVE--TKDIEPLTANIVGPICETGDFLGK 342 >gi|269140449|ref|YP_003297150.1| putative diaminopimelate decarboxylase [Edwardsiella tarda EIB202] gi|267986110|gb|ACY85939.1| putative diaminopimelate decarboxylase [Edwardsiella tarda EIB202] gi|304560241|gb|ADM42905.1| Diaminopimelate decarboxylase [Edwardsiella tarda FL6-60] Length = 465 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 100/443 (22%), Positives = 186/443 (41%), Gaps = 32/443 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F G L E + LA TPFY +S I +N AF +T +A K Sbjct: 23 FSARGGKLCFEGQDVTALAKKYGTPFYVFSEAEIVRNIREIEQAFSAHPNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V++ + G + S+ E+R+ L ++IVF+GV K ++++ A+ + +Y Sbjct: 83 SVMGVLQAIRDAGICAEANSQYEVRKCLEVGFRGDQIVFNGVVKKPEDLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELDHIDAISRRLKKTANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA ++L D +++L G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPEAEPFAKATRVLVDESRRLEQVLGITFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDEENGDPLKDNMYAGITAQDFADAVISEVHKWRTDVQICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDFM---------RPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V K+ + ++ + + + Y + + + Sbjct: 322 EVACEKRKTNYDVDGNVECHVEWKFVDAGYSVLSDSQHFDWFFYVYNASRITEAHDRYIK 381 Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 382 LAGPLCDGGDYFHVGVKGEEFLMPHDTAIGDVVAFLDAGAYSIESQTVYNNRPRTAVVMI 441 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + +IR +++++++ D Sbjct: 442 DRQGNDRLIRREDSYEDMVKYDI 464 >gi|291295185|ref|YP_003506583.1| diaminopimelate decarboxylase [Meiothermus ruber DSM 1279] gi|290470144|gb|ADD27563.1| diaminopimelate decarboxylase [Meiothermus ruber DSM 1279] Length = 393 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 100/398 (25%), Positives = 183/398 (45%), Gaps = 22/398 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L + A +TPFY Y I++ AF T + YA+KAN ++K G Sbjct: 17 ALLEAASQFETPFYAYDWPTIQERLERLQKAFPQ--TEIFYAIKANPRLGLLKRFLERGV 74 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 ++ VS GE+ RA A ++ +G KT ++ + G+ ++S ++L+ ++ Sbjct: 75 FVEAVSLGEVLRAYQAGFRRNEVLLNGPVKTPAMLEALNRIGLPMLGLDSLADLERASRL 134 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 +A + RVNPD+ TH ++TG+ E KFGI ++ A +++ G+ Sbjct: 135 ----LPRARVLLRVNPDLPIVTHDHLATGRGESKFGILPEEVGPALELARRS-RLEVLGL 189 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +H+GS ++ E + ++++ L + Sbjct: 190 HIHLGSALEHPEDYQAGYRVMDGLYRTHGPFEVMNL-----------GGGFGLGLDLGAL 238 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + ++ +EPGR+LVA+ G+LVT+ K++ + ++++D M+ +RP L Sbjct: 239 GAQAAALAHKHGAELWIEPGRYLVAEAGVLVTRCWGTKRTR-RNYLLIDAGMSQLIRPML 297 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 Y A H + + + D+ GP CE+GD +A + + PR GDLL I + GAY Sbjct: 298 YGAIHPVEPLY---HNPRQATYDLAGPACESGDVLARDITLPEPREGDLLAILQAGAYAG 354 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S Y E++ G + +IR R +++ L+E + Sbjct: 355 SMSSNYLDTPRPLELLWTGQGWEVIRRRQSWEALLEDE 392 >gi|312891392|ref|ZP_07750909.1| diaminopimelate decarboxylase [Mucilaginibacter paludis DSM 18603] gi|311296086|gb|EFQ73238.1| diaminopimelate decarboxylase [Mucilaginibacter paludis DSM 18603] Length = 428 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 121/402 (30%), Positives = 188/402 (46%), Gaps = 41/402 (10%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPFY Y +++ ++A + V YA+KAN N V+ + G G D VS GE+ Sbjct: 20 TPFYYYDLKLLKETLQACADASAKYNFHVHYAMKANFNPRVLDLIQSYGFGADCVSGGEV 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + A+A ++VF+GVGK+ EI+ AL I+CFN+ES EL+ +N A + K A + Sbjct: 80 KAAIAHGFDKGKVVFAGVGKSDKEINEALDREIFCFNIESVQELQIINDLAKAKNKTASV 139 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A R+NP+++A+TH I+TG +E+KFG+ I ++ ++ + P +K G+ HIGSQI Sbjct: 140 AIRINPNVDAHTHHFITTGLEENKFGVNIWELPAVAEALAKCPHLKFLGIHFHIGSQITD 199 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---DYASLIHQY 263 + + + +L G I+ +++GGGLG+ Y P + Sbjct: 200 LGVYKNLCIRVNELQLWFEERGLPIKVLNLGGGLGVDYQQPDANPICDFESYFKVFNDFL 259 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE- 322 ++ E GR LVA LV++V+ +K K F+ILD M + +RP LY AYH+ Sbjct: 260 NVKPNQEVHFELGRALVAQSAALVSRVLYVKNGIKKNFLILDAGMTELIRPMLYQAYHQI 319 Query: 323 -------------------------------------INYIVNPAGDRLHIHADIVGPIC 345 + D+VGPIC Sbjct: 320 ENLSRGEEAGSERQGAGSRKLEPGIGSQEAGNTDSELQTPDSRLNSPGSELKYDVVGPIC 379 Query: 346 ETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 E+ D + + GDL+ + GAYG V + YN R Sbjct: 380 ESTDCFRKDVDLPESFRGDLIVVRTAGAYGEVMASGYNLRER 421 >gi|218671272|ref|ZP_03520942.1| diaminopimelate decarboxylase protein [Rhizobium etli GR56] Length = 309 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 181/309 (58%), Positives = 240/309 (77%), Gaps = 1/309 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F++ +G LHAENV + ++A V TPFY YST +E++Y FS AF MD+MVCYA+K Sbjct: 1 MNHFEHRDGILHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL LG+G+D+VSEGELRRALAA +PA RI+FSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL+ LNQRAVS GKKAP++FR+NPD++A TH KISTGKKE+KFGI + + Sbjct: 121 CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +YA+A+ LPG++++G+DMHIGSQI +++ F AFKLLRDL LR++GH I H+D+GGGL Sbjct: 181 IYAHAAKLPGIEVTGIDMHIGSQITELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGL 240 Query: 241 G-IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 G ++ PP YA+++ +L CK+I EPGR +V + GILVT+V+ +K +K Sbjct: 241 GVPYKDDNNPPPLPDAYAAIVKNQLRDLDCKVITEPGRLIVGNAGILVTEVLYVKDGGEK 300 Query: 300 TFVILDVAM 308 TFVI+D AM Sbjct: 301 TFVIVDGAM 309 >gi|256821372|ref|YP_003145335.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Kangiella koreensis DSM 16069] gi|256794911|gb|ACV25567.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Kangiella koreensis DSM 16069] Length = 408 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 108/405 (26%), Positives = 188/405 (46%), Gaps = 17/405 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M+ F+ +G L S+E++ + TP Y Y + I++N F + YA+ Sbjct: 9 MNQFESRDGQLVIAGYSVEEVVAIAGQTPCYVYDRSVIKQNVDRLRRFFP--KVSLHYAI 66 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN AV+ L+H GLD+ S EL AL+ + ++ F+G GK+ E+ +A+ SGI Sbjct: 67 KANPMPAVVNYLSHQVDGLDVASAKELHTALSTGISPSKVSFAGPGKSEQELTMAIFSGI 126 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N+ES +ELK + A S + A IA R+NPD + G + +FGI + Q+ Sbjct: 127 T-INIESITELKRIITIADSHDRVANIALRLNPDFELKSSGMKMGGGPQ-QFGIDVEQLD 184 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFK-LLRDLTQQLRSNGHNIQHIDVGG 238 ++ P + G+ + GSQ S A + + + G +++H+++GG Sbjct: 185 QVFELLEH-PKLNFMGLHIFTGSQNLNAGSIITAHNSIFALVARLHAEYGFSLKHLNIGG 243 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-----CKIILEPGRFLVADVGILVTKVISI 293 G GI Y + A +++ Q C++ILE GR+LV + GI + ++ Sbjct: 244 GFGIPYFPGDKLLDLEPIAENLNKLIDEHQSLLNDCELILELGRYLVGNAGIYLCQITDK 303 Query: 294 KKSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S +T++I + ++ + I N +IVGP+C D Sbjct: 304 KVSRGQTYLIANGGLHHHLAASGNFGQVIRKNYPVAIANRMQQSDTELVNIVGPLCTPLD 363 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 +A ++ + GD + + ++GAYG S + S E+++ Sbjct: 364 ILANKMELPKAQIGDWVAVYQSGAYGFTASPRDFLSHPHPVELLL 408 >gi|108760390|ref|YP_630578.1| pyridoxal-dependent decarboxylase [Myxococcus xanthus DK 1622] gi|108464270|gb|ABF89455.1| decarboxylase, pyridoxal-dependent [Myxococcus xanthus DK 1622] Length = 480 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 96/442 (21%), Positives = 156/442 (35%), Gaps = 48/442 (10%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVI 68 L E V L +L +P + A+ +N F G V Y+ K N V+ Sbjct: 49 LSLEGVPLAQLVERWGSPLHVVHMAALRRNAERFLAVPPGRTGGCEVYYSYKTNPVPGVL 108 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 L LG G +++S E+ AL VP ERIV++G K+ + A+ GI Sbjct: 109 SFLHGLGVGAEVISAYEMWLALKLGVPPERIVYNGPVKSEASVREAISRGIQLLAANHAE 168 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ--IHSLYAYAS 186 E+ + A L ++ +A RV + +FG PI Y A Sbjct: 169 EIAVFARLAAELDRRPRVAVRVTTNSG-----------WSAQFGTPIAGGAALRAYQQAR 217 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + + G+ H G I F + + D T L + GG Sbjct: 218 GSKHLDVVGLHAHRGETIRTEGDFTAFVESVLDFTDTLHQELGLDLEVLDLGGSLNTPTV 277 Query: 247 DHRPPSSSDYASLI----------------------------HQYFGNLQCKIIL-EPGR 277 +H H Q I EPGR Sbjct: 278 EHIAERDWRLNLTFFRDVPAPDPAASLSIDRYVALAVEMVETHYARRGRQRPRIFLEPGR 337 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH 337 + D +L+ +V ++K D+T+ +LD +N + + VN Sbjct: 338 AMTGDTQLLLGRVHALKAGEDRTWAVLDAGINHAECVRNE---YHQLFHVNRPDAPADKV 394 Query: 338 ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ 397 +VGPIC GD + +++ R GD L I GAY + ++ S + + + Sbjct: 395 YTVVGPICTPGDTLYHAKRLPDLRVGDTLAIMDAGAYFVPFATSF-SYPQPAIVALEDGK 453 Query: 398 FHIIRPRMTFQELIELDSIPAW 419 ++R TF +L+ D++ + Sbjct: 454 ERLLRRAETFDDLVTFDALDSR 475 >gi|163736245|ref|ZP_02143664.1| Orn/DAP/Arg decarboxylase 2 [Phaeobacter gallaeciensis BS107] gi|161390115|gb|EDQ14465.1| Orn/DAP/Arg decarboxylase 2 [Phaeobacter gallaeciensis BS107] Length = 828 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 106/417 (25%), Positives = 184/417 (44%), Gaps = 17/417 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 ++++A TPFY Y + + + A +D Y+LK+N N +V + L G+G Sbjct: 13 IDEIATTAGTPFYLYDASVLRRRLDALRAALPQVDF--FYSLKSNPNLSVTRVLHGHGAG 70 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 ++ S EL +L A ERI+ G GK+ E+ A++ GI VES EL ++ A Sbjct: 71 CEVSSLLELETSLQAGATPERILMVGPGKSETELTRAIELGIKAIVVESAYELTQIDALA 130 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G+ IA RVNPD +A K +G+ +FGI ++ + A +++ G+ Sbjct: 131 RQQGRVQNIALRVNPDFHAGGAKLNMSGRP-TQFGIDQSELPDVLKQAEGCAQLRLCGLH 189 Query: 198 MHIGSQI-DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 ++G++I +L T+ + S + +DVGGG GI Y+ Sbjct: 190 AYMGTRILTHETVVANVGNILNLATEVVSSLKVPLDFVDVGGGFGIPYYDGETELDLDAL 249 Query: 257 ASLIHQYFG-----NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + + ++++E GR+L G VT+V K S + F + D N Sbjct: 250 GQAVTPLVQSFGTTHPKTRVVIELGRYLSGPSGQFVTRVQQTKSSKGEHFAVCDGGSNVH 309 Query: 312 MRPTLYDAYHEINYI------VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 + + I D + GP+C D I + +A P+ GDL Sbjct: 310 VAAAGQGFLRKNFPIRLLRDGKAEIDDEAAQPWTLTGPLCTPQDVIGKSVLMATPQVGDL 369 Query: 366 LYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQ 421 + I ++GAYG S + E+M++G++ ++R R T + + P+ L+ Sbjct: 370 ISIGQSGAYGPTASPVNFLGFGAPAEVMIDGTELRLVRSRDTVEARLAGQQ-PSDLR 425 >gi|326771975|ref|ZP_08231260.1| diaminopimelate decarboxylase [Actinomyces viscosus C505] gi|326638108|gb|EGE39009.1| diaminopimelate decarboxylase [Actinomyces viscosus C505] Length = 486 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 100/450 (22%), Positives = 179/450 (39%), Gaps = 43/450 (9%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--------MDTMVCYAL 59 +G L +++ ++ +P + + +++ A YA Sbjct: 36 DGELVLGGLTVSEILAEAPSPVFVLDEADLRGRAASWAAAMHEEFWPSYGMAGGEAFYAG 95 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELR---------RALAAPVPAERIVFSGVGKTIDE 110 KA V + + G G+D S GEL A A R+ G GKT E Sbjct: 96 KAFLTTKVAQWVLEEGMGIDTASRGELAVSLAALQEVDGEEATTDATRLGLHGNGKTQAE 155 Query: 111 IDLALQSGIYCFNVESESELKTL--------NQRAVSLGKKAPIAFRVNPDINANTHKKI 162 I +AL + ++S E++ + + R+ ++A H+ I Sbjct: 156 IAVALTHHVGHLVLDSLEEVELAVRAVRELRASSVYGPEETGKVMVRLTTGVHAGGHEYI 215 Query: 163 STGKKEDKFGIPIHQIHSLYAY--ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL 220 STG ++ KFG+ +H + A P +++ G+ HIGSQI + F +A ++ L Sbjct: 216 STGHEDQKFGLSVHGGAARQAIDAIIAAPELELHGLHSHIGSQILDLAGFREAVGIVLTL 275 Query: 221 TQQLR-SNGHNIQHIDVGGGLGIAYHSDHRPPSSS--------DYASLIHQYFGNLQCKI 271 ++ GH +D+GGG GIAY P S + + G+ + Sbjct: 276 RHEVAVDTGHLCPEVDLGGGYGIAYTGADPVPPSPAQVARTLAEAVRETCERLGDEVPTV 335 Query: 272 ILEPGRFLVADVGILVTKVISIKKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +EPGR + + + V +K+ + +V +D M+D +RP LY+A + Sbjct: 336 SIEPGRAVAGPTTVTLYTVTGLKRVELGEGASRLYVSIDGGMSDNIRPALYEAAYTTLIA 395 Query: 327 VNPAGDRL-HIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNS 384 + + + +VG CE+GD + + + GD+L + TGAYG + YN Sbjct: 396 NRRPDPQAGLVRSRVVGKHCESGDVVVRDVDLPADLAVGDVLAVPATGAYGRSMASNYNL 455 Query: 385 RLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 V + + T ++L+ L+ Sbjct: 456 FTRPGVRWVREGESGWVLRPETIEDLVRLE 485 >gi|292492211|ref|YP_003527650.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus halophilus Nc4] gi|291580806|gb|ADE15263.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus halophilus Nc4] Length = 410 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 109/404 (26%), Positives = 175/404 (43%), Gaps = 16/404 (3%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 + F + L +SL +LA V TPFY Y I + + YALK Sbjct: 11 NCFPVKDDCLFVGGISLTELATRVGSTPFYAYDRRLISERIQQLRTHLP-PGIHLHYALK 69 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN A++ LA L GLD+ S GELR AL + +P E I F+G GK+ +E+ +L +GI Sbjct: 70 ANPMPALVGYLAPLVDGLDVASLGELRLALDSGMPPETISFAGPGKSDNELAASLAAGII 129 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 E++ + + A G + +A RVNP+ T G + FGI ++ Sbjct: 130 INMESEG-EMERIARLAEKQGHRPKVAVRVNPNFELKTSGMKMAGGPK-PFGIDAERVPP 187 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGG 239 + L G + GSQ + E+ +A + L + RS ++ +++GGG Sbjct: 188 MLTQIGALDF-DFYGFHIFSGSQNLRAEAIIEAQERTFKLALELARSAPGPVRLLNIGGG 246 Query: 240 LGIAYHSDHRPPSSSDYASL-----IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GI Y +P A+ + ++I+E GR+LV + GI V +VI K Sbjct: 247 FGIPYFPGDKPLDLRPIANNLATSLPEVNKQLPEAEVIIELGRYLVGEAGIYVCEVIDRK 306 Query: 295 KSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 S F+I + ++ + + N +VGP+C D Sbjct: 307 ISRGHVFLITNGGLHHHLAASGNFGQVIRKNYPVVVGNRIQGSARETVSVVGPLCTPLDT 366 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 +A ++A GDL+ + ++GAYG S + S E++V Sbjct: 367 LADRMELACADVGDLVVVFQSGAYGRSASPLGFLSHPAPAEVLV 410 >gi|313238222|emb|CBY13314.1| unnamed protein product [Oikopleura dioica] Length = 415 Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats. Identities = 103/416 (24%), Positives = 186/416 (44%), Gaps = 12/416 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVV--QTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYAL 59 ++ + SL E++SLE A + + P + YS ++ N ++ + D + T + +++ Sbjct: 2 IEFKKESLCVEDLSLENFAAQINLEDPVFVYSENSLRSNVKSYLSGLDALKSMTQLNFSM 61 Query: 60 KANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 K+N N AVIK L G GL VS GEL A +++++F+G GK E+ A++ G Sbjct: 62 KSNFNPAVIKVLKSAGVTGLTTVSGGELDLAAKLEFNSDKVIFNGNGKCDGEVRTAIERG 121 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINAN-THKKISTGKKEDKFGIPIHQ 177 NV+S + ++ + +L +K + R+NP+I+ + K KFG+ + Sbjct: 122 HI-INVDSWFDYVRISSTSRALNQKCQVLIRINPNIDPKVHQYNTTASGKACKFGVIQEE 180 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 I SL + + G+ H+GS I+ +E + L+ + + + + + Sbjct: 181 ISSLARKIFEDENLSLLGIHCHLGSTINDLEPIRQCSTTLKIIMESIAHFLEPGRKVVNV 240 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GG + + II EPGR LV + V Sbjct: 241 GGGLAINYEKQAHGYPTPQEYTECFTNFGRDYLIIFEPGRSLVGNSA---VCVGRSLGVK 297 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 + ++ +++M + +RP LY A+ + + +VGP+CE+ DF+ ++ Sbjct: 298 NDNILVTNMSMTECIRPALYQAF-HLVTLTKKTSKADSKVFKVVGPVCESADFLNKAAEL 356 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 L+ + GAY V S YN R E +V GSQF IR + TF++++ Sbjct: 357 PSTIENNQLVVLWDVGAYCHVLSSNYNMRPRRAEYLVTGSQFRQIRRQDTFEDMMS 412 >gi|297156524|gb|ADI06236.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces bingchenggensis BCW-1] Length = 423 Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats. Identities = 104/425 (24%), Positives = 180/425 (42%), Gaps = 18/425 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M +F+ + + LA TP Y Y + + + A + Y+LK Sbjct: 1 MESFE------AVQGIRAADLADHYGTPLYVYDGELLAGAVRSLAEALPR-PMEIFYSLK 53 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN N +V L G+ ++ S ELR A A E I+F G GK ++I +Q +Y Sbjct: 54 ANPNSSVCSLLFAHGAHAEVSSLVELRTARTAGARPENIIFLGPGKNAEDIRACVQGRVY 113 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 ES EL+ + A G + + R+NP +++ G K +FGI Q+ + Sbjct: 114 AIVCESWEELELIEATARQAGLRQRVLLRINPSFG-GAGSRLAMGGKPRQFGIDEEQVLA 172 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESF-HKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 S L GV +++G++I + ++L + + G ++ +DVGGG Sbjct: 173 GKERLSALTHAVPLGVHVYLGTRILDAAAIVENTAQVLALAERVAAATGIELEAVDVGGG 232 Query: 240 LGIAYHSDHRPPSSSDYAS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 LG+AY + + + + + + +++LE GRFL A G + +V +K Sbjct: 233 LGVAYFENEQDLDLDALRTGLTPVVGDFARRHPRTRLLLESGRFLTARAGAYLVRVQYVK 292 Query: 295 KSADKTFVILDVAMNDFMR---PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 +S D F + D + M Y + V G + GP+C D + Sbjct: 293 ESRDTWFAVTDGGTHHHMAAVGVGSYARRNFPVAAVAGDGAGPERRWHVTGPLCTPEDTL 352 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 A + PGD+L + ++GAYG S + S E++V+ + ++R R T +L Sbjct: 353 ARGVPLPGIAPGDVLAVLRSGAYGPTASPGLFLSHGFPAEVLVHEGRPLLVRDRDTADDL 412 Query: 411 IELDS 415 + Sbjct: 413 LRKQR 417 >gi|257077100|ref|ZP_05571461.1| diaminopimelate decarboxylase [Ferroplasma acidarmanus fer1] Length = 421 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 96/408 (23%), Positives = 171/408 (41%), Gaps = 15/408 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 S++ ++ TP Y+ + +N +AF+G++ V +A+K+N N ++ + Sbjct: 17 EFAGKSIKNISDAYGTPVIVYNMARVRENIRRIRDAFNGINIKVHFAVKSNYNPYIVSQI 76 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G+G+D + E++ A+ + + I+ + + E+ + G+ Sbjct: 77 IKEGTGIDAANYNEVKLAIMCGLGSRDIIATPNNLSGTELRTIKEEGVAINFDHEGQMGL 136 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 ++FR+NP I I+TG K KFGI + S Y+ A Sbjct: 137 L------KGSLPETVSFRINPGIGKGEFPGITTGGKNVKFGISVDDAISAYSAAIKAGVK 190 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 M + ++ + + G + ID+GGG G+ Y SD Sbjct: 191 HFGIHMMTGSNVLEPEFFNESSGLFFKIAETISDRTGIDFDFIDIGGGFGVPYTSDEHAL 250 Query: 252 SSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 A I + ++I+EPGR++VAD IL++KV SIK S D+ + + Sbjct: 251 DIGKTAGYISDNFRASNNRGYFKDSRLIIEPGRYIVADSAILLSKVTSIKHS-DRELIGI 309 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D +MN +R LY A + + DIVG +CE D+IA + I P GD Sbjct: 310 DASMNTLIRIPLYGAR-HGILLSGHGENTSSSRFDIVGQVCENTDYIAKDISIPEPAVGD 368 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 ++ I GAY A + YN E+++ G + + + + ++ Sbjct: 369 IVVIADAGAYVASMASNYNLLSRPAELVLEGDREILTKGHDGLESMLA 416 >gi|309798991|ref|ZP_07693248.1| diaminopimelate decarboxylase [Streptococcus infantis SK1302] gi|308117395|gb|EFO54814.1| diaminopimelate decarboxylase [Streptococcus infantis SK1302] Length = 394 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 99/386 (25%), Positives = 155/386 (40%), Gaps = 15/386 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 + +LEK+ TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FIKREALEKIVEEFPTPFHLYDEKGIREKARAVNKAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + ++FS E A + G Sbjct: 65 LQEEGCGVDCSSYVELLMSHKLGFTGADMMFSSNNTPDREYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKEQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + Q + + Q KI E GRF++A GILVTKV KK+ +T++ Sbjct: 241 NDIALIGEGVRQVYEEVLTPAGLGQVKIFTELGRFMLAPHGILVTKVTHKKKT-YRTYLG 299 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 +D + + MRP +Y AYH I + D D+VG +CE D A+NR++ G Sbjct: 300 VDASAVNLMRPAMYGAYHHITNM--MHPDGQTEVVDVVGSLCENNDKFAVNRELPQTEIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIP 389 DLL I TGA+G YN++L Sbjct: 358 DLLVIHDTGAHGFSMGYQYNAKLRSA 383 >gi|296158669|ref|ZP_06841499.1| Diaminopimelate decarboxylase [Burkholderia sp. Ch1-1] gi|295891237|gb|EFG71025.1| Diaminopimelate decarboxylase [Burkholderia sp. Ch1-1] Length = 477 Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 90/441 (20%), Positives = 170/441 (38%), Gaps = 31/441 (7%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQ 65 G+L + ++ LA P Y S + Y F + F + +A K+N+ Sbjct: 30 NGNLWVDGCDVQALAETHGAPLYIISENELRDRYRAFRDGFLAHYPQVEILFANKSNNGL 89 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ L G+G D E+ AL A +++V +G K +E+++A+ +GI N++ Sbjct: 90 AIRHILNQEGAGGDCFGVNEMYIALLAGTDPQKLVLNGSNKQDEELEMAIANGIC-VNID 148 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPD---------INANTHKKISTGKKEDKFGIPIH 176 + EL ++ + LG+K I R+ D + + + K+G+ Sbjct: 149 AMDELDRIDVISKRLGRKVAIGIRLKLDLLPLAGRTGVAMHGPGTLKEQSDSTKWGMTRE 208 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 Q + A + +++ H+ + E+F + + + LR Sbjct: 209 QTVDIVKRAQKMANIELKETHFHLSRMSNDPENFAIMAREMIVWSGFLRDETGWTPPCID 268 Query: 237 GGGLGIAYHSDHRPPS-----------------SSDYASLIHQYFGNLQCKIILEPGRFL 279 GG P + K+ +EPGR + Sbjct: 269 IGGGWTFGKWYGTGPRSQIDDSAAPTPDIYGRLCGAAICEEAERLKLPLPKLRIEPGRAI 328 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 G+ V +V +IK+ A K +V LD++ N + ++ V G + H D Sbjct: 329 SGPSGVAVGQVGAIKQGASKKWVNLDLSTN-HLSWASALDWYYHAVAVKDTGREANDHVD 387 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 +VGP+C D + +R + L GD + G Y + YN++LL ++V+G Sbjct: 388 LVGPLC-NSDEVGADRVMPLLERGDFVAFLDAGGYTESGAARYNAQLLPATVLVSGDTAE 446 Query: 400 IIRPRMTFQELIELDSIPAWL 420 + R ++++ +P L Sbjct: 447 VTTVREQWRDVAGRFKVPPRL 467 >gi|56477868|ref|YP_159457.1| ornithine/diaminopimelate/arginine decarboxylase,family protein [Aromatoleum aromaticum EbN1] gi|56313911|emb|CAI08556.1| Ornithine/diaminopimelate/arginine decarboxylase, family 2 [Aromatoleum aromaticum EbN1] Length = 416 Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 115/404 (28%), Positives = 186/404 (46%), Gaps = 16/404 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M+ F +G L +SL +LA V TPFY Y + + A + + YA+ Sbjct: 16 MTQFSVAKGELVVGGISLTRLAARVGRTPFYAYDRGLLTQRVSELRTALPR-EVRLHYAM 74 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN A++ +A L G+D+ S GEL+ AL A I F+G GK E+ ++ +GI Sbjct: 75 KANPMPALVCHMAKLVDGIDVASAGELKVALDAGADPGEISFAGPGKQDAELQQSVAAGI 134 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N+ES E+ L +V+LG A +A RVNPD + G + +FG+ Q+ Sbjct: 135 L-VNLESFREIAPLVAASVALGLPARVAVRVNPDFELKSSGMKMGGGPK-QFGVDAEQVP 192 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGG 238 L A G + GSQ + E+ +A + +L +L + ++ +++GG Sbjct: 193 QLLAEIGRAGLA-FEGFHLFAGSQNLKAEAIVEAQRKSFELALRLAEHAPAPVKFLNLGG 251 Query: 239 GLGIAYHSDHRPPSSSDY-----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 G GI Y + + A + Q ++++E GR+LV + GI V +VI Sbjct: 252 GFGIPYFPGEQRLELAPIGDNLAALVAEAARKLPQAQLVIELGRYLVGEAGIYVCRVIDK 311 Query: 294 KKSADKTFVILDVAMNDFMR----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S T+++ D ++ + + I N GD + +VGP+C D Sbjct: 312 KVSRGHTYLVTDGGLHHHLSASGNFGQVIRKNYPVAIGNRMGDAATENYSVVGPLCTPLD 371 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIM 392 + + +PGDL+ I ++GAYGA S T + I EI+ Sbjct: 372 LLGEKINLPQVQPGDLVVIHQSGAYGASASPTGFLGHPEIIEIL 415 >gi|163741227|ref|ZP_02148619.1| hypothetical protein RG210_17245 [Phaeobacter gallaeciensis 2.10] gi|161385580|gb|EDQ09957.1| hypothetical protein RG210_17245 [Phaeobacter gallaeciensis 2.10] Length = 828 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 103/404 (25%), Positives = 179/404 (44%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 ++++A TPFY Y + + A +D Y+LK+N N +V + L G+G Sbjct: 13 IDEIATTAGTPFYLYDASVLRGRLDALRAALPQVDF--FYSLKSNPNLSVTRVLHGHGAG 70 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 ++ S EL +L A ERI+ G GK+ E+ A++ GI VES EL ++ A Sbjct: 71 CEVSSLLELETSLQAGATPERILMVGPGKSETELARAIELGIKAIVVESAHELTQIDALA 130 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G+ IA RVNPD +A K +G+ +FGI ++ + A + +++ G+ Sbjct: 131 RQQGRVQNIALRVNPDFHAGGAKLNMSGRP-TQFGIDQSELPDVLKQAESCAHLRLCGLH 189 Query: 198 MHIGSQI-DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 ++G++I +L T+ + + + +DVGGG GI Y+ Sbjct: 190 AYMGTRILTHETVVANVGNILNLATEVISTLKAPLDFVDVGGGFGIPYYDGETELDLDAL 249 Query: 257 ASLIHQYFG-----NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + + ++++E GR+L G VT+V K S + F + D N Sbjct: 250 GQAVTPLVQSFGATHPKTRVVIELGRYLSGPSGQFVTRVQQTKSSKGEHFAVCDGGSNVH 309 Query: 312 MRPTLYDAYHEINYI------VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 + + I D + GP+C D I + +A P+ GDL Sbjct: 310 VAAAGQGFLRKNFPIRLLRDGKAEIDDEAAQPWTLTGPLCTPQDVIGKSVLMATPQVGDL 369 Query: 366 LYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + I ++GAYG S + E+M++G++ ++R R T + Sbjct: 370 ISIGQSGAYGPTASPVNFLGFGAPAEVMIDGTELRLVRSRDTVE 413 >gi|114319288|ref|YP_740971.1| Orn/DAP/Arg decarboxylase 2 [Alkalilimnicola ehrlichii MLHE-1] gi|114225682|gb|ABI55481.1| Orn/DAP/Arg decarboxylase 2 [Alkalilimnicola ehrlichii MLHE-1] Length = 411 Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 114/405 (28%), Positives = 175/405 (43%), Gaps = 16/405 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F+ +G L L L TPFY Y + + + YA+ Sbjct: 11 MDQFEVADGMLQVGGRPLSDLVQQAGGTPFYAYDRRLMTRRVAALRQTLPE-GIALHYAI 69 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN AV++ +A GLD+ S GELR AL A V A I F+G GKT DE+ A+ +GI Sbjct: 70 KANPMPAVVQHMAGQVDGLDVASAGELRVALDAGVSAADISFAGPGKTDDELAAAVAAGI 129 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 + EL+ L A +G + +A RVNPD T +G + FG+ + Sbjct: 130 TINLESAT-ELERLAAIAEKIGHRPHVAVRVNPDFELKTSGMKMSGGAK-PFGVDAEAVP 187 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGG 238 +L + L G + GSQ + E+ +A L DL +L + ++ +++GG Sbjct: 188 ALLKRIAALDV-HFRGFHIFSGSQNLRAEALVEAQGLTLDLALRLADDAPGPVEMLNIGG 246 Query: 239 GLGIAYHSDHRPPSSSDY-----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 G GI Y R + A L +IILE GR+LV + GI V KV+ Sbjct: 247 GFGIPYFPGDRRLDLAPVSEQLEARLPAVRERLPGVEIILELGRYLVGEAGIYVAKVVDR 306 Query: 294 KKSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S +TF++ + ++ + + N D+VGP+C D Sbjct: 307 KVSRGRTFLVTNGGLHHHLAASGNFGQVIRKNYPVAVGNRMDASASETVDVVGPLCTPLD 366 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMV 393 +A + +PGD + + ++GAYG S + E++V Sbjct: 367 ILAQQVDLPPAQPGDWIVVYQSGAYGYTASPTRFLGHPEPLELLV 411 >gi|82703085|ref|YP_412651.1| Orn/DAP/Arg decarboxylase 2 [Nitrosospira multiformis ATCC 25196] gi|82411150|gb|ABB75259.1| ornithine decarboxylase [Nitrosospira multiformis ATCC 25196] Length = 391 Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats. Identities = 80/375 (21%), Positives = 142/375 (37%), Gaps = 18/375 (4%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 L PF + I F A YA+KAN + V+KTL G G + Sbjct: 34 ALKQGYSKPFLLVDSNIIRNKARRFKAAMPR--VQPHYAVKANPDPRVLKTLIEEGVGFE 91 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 I S EL L+ VPA I +S K+ ++ A G+ + ++S EL+ + Sbjct: 92 IASISELDLLLSLNVPAADIYYSNPMKSRAYLEYAAAKGVEWYVLDSVEELRKI------ 145 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + + +T S KFG + +I + A+ L ++GV H Sbjct: 146 ----VSVKPDAKLYLRIDTPNIGSDWPLAGKFGTHVAEIKEIIDEAANL-QADLAGVTFH 200 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 +GSQ +++ + + +R G + + +++GGG + + Sbjct: 201 VGSQCRNPQNWRVGIERAIKVFADMRQAGLSPRLLNIGGGYPVRHVKPIPSIEVIGEVVN 260 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 +I+ EPGR+LV+D V +V+ K ++ D + + Sbjct: 261 EAIANLPENIRIMAEPGRYLVSDAAYFVCRVVGTATRNGKRWMYWDAGVFGGVIEVTEGL 320 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQ 378 +EI I + GP C++ D + + + GD +YI GAY Sbjct: 321 RYEIL----SDRTGPSIPWSVAGPTCDSVDILMRDELLPEDIEEGDFIYIPNAGAYTTAY 376 Query: 379 SGTYNSRLLIPEIMV 393 + +N L +++ Sbjct: 377 ASNFNGFPLPEVVVL 391 >gi|149195262|ref|ZP_01872351.1| Orn/DAP/Arg decarboxylase, family 2 [Caminibacter mediatlanticus TB-2] gi|149134604|gb|EDM23091.1| Orn/DAP/Arg decarboxylase, family 2 [Caminibacter mediatlanticus TB-2] Length = 443 Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 91/425 (21%), Positives = 170/425 (40%), Gaps = 26/425 (6%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--ALKANSNQAVIK 69 + V + L +P + +S IE YL F AF V + + K N A+ K Sbjct: 30 EIDGVDVYDLVKEFGSPLFVFSERDIENKYLEFKEAFSSRYPDVEFWWSYKTNYLGAICK 89 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 LGS ++VSE E ++A + + I+F+G K+ + +++A++ G ++ E Sbjct: 90 VFHKLGSKAEVVSEFEYQKARHLGIDGKDIIFNGPYKSKEALEVAVKEGAKIH-IDHWDE 148 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + L + A LG P+A R N + ++ + Sbjct: 149 INDLEEIADKLGVNIPVAIRCNMNTGVYPLWSRFGFNIDNNEAYDAIKRIYEGKKLY--- 205 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG-------- 241 + G+ HIG+ + +++ A K L +L ++ GG Sbjct: 206 ---LIGLHTHIGTFMLSADAYRVAAKKLTELKNRVEEEFGFNIEYLDLGGGFASKNRLKG 262 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ----CKIILEPGRFLVADVGILVTKVISIKKSA 297 + + P+ DYA I K+ LE GR L+ + G L+T V + K+ Sbjct: 263 VYQPPEVIVPTPDDYAIAITDTIYATNKGNLPKLYLETGRALIDEAGYLLTSVFASKRLP 322 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 D + A + ++ + ++ D + + + GP+C D IA N + Sbjct: 323 DGKVSYILDA---GVNLLYTSFWYNFDIFLSKKYDDISELSILNGPLCMNIDVIADNIYL 379 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDSI 416 GD++ I GAY Q + R ++++ S H+IR + +++I+ + I Sbjct: 380 PPLNRGDVVTIAPVGAYNVTQWMQFI-RYRPAVVLIDKNSNPHLIREKEDLEDIIKRERI 438 Query: 417 PAWLQ 421 P +L+ Sbjct: 439 PEYLK 443 >gi|221485097|gb|EEE23387.1| pyridoxal-dependent decarboxylase, putative [Toxoplasma gondii GT1] Length = 564 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 109/462 (23%), Positives = 176/462 (38%), Gaps = 72/462 (15%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------------------------------ 51 A + TPFY Y T I +N AF Sbjct: 9 ATIHPTPFYLYDETRIRENCRRLLAAFSWASEPFSTSSQSALENAPRSPRESLENRLGVR 68 Query: 52 -------DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGV 104 +A+KA A+++ L G G D S EL A AA ERI F+ Sbjct: 69 SSYSAAAGFTNYFAVKATPTPAILEILREEGLGADCSSLAELLLAEAAGFRGERIFFTSN 128 Query: 105 GKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANT---HKK 161 ++E A G ++ + +L F + + +T + Sbjct: 129 ETPLEEFLKARDLGAIINLDDASHLDFLHEKFGGALPSILCFRFNPSAESRQSTSQSNPV 188 Query: 162 ISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT 221 I KE KFG+ Q+ + A + + + M + + + E A +L Sbjct: 189 IMGHPKESKFGMTKTQLFHCLSRARSWGVRRFALHTMILSNCLSVDEVVETARLILTVAA 248 Query: 222 QQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILE 274 + G I+ I++GGGLG+ YH + + + + ++ I ++ +++ E Sbjct: 249 EINERLGITIEMINLGGGLGVPYHPEEKDLNLHEVSARIRTWYKCTLALKGLAGTRLVTE 308 Query: 275 PGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL 334 GRF+ AD G+LVT+VI KK+ K F+ +D M MRP +Y AYH I+ + + D Sbjct: 309 NGRFITADAGVLVTRVIHHKKT-YKRFIGVDACMAHLMRPGMYGAYHHISVVPDRDHDDP 367 Query: 335 HIH-----------------------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + D+VG +CE D A++R + GD+L I Sbjct: 368 RLPSRRNLFLSPEDDEEADDVSDNEIYDVVGGLCENNDKFAIDRPLPRVDIGDILLIHDV 427 Query: 372 GAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 GA+G YN RL E + + +IR T ++L Sbjct: 428 GAHGHSMCFNYNGRLRCAEYLRRLNGEVVMIRRAETLKDLFA 469 >gi|307133129|ref|YP_003885145.1| diaminopimelate decarboxylase [Dickeya dadantii 3937] gi|19571822|emb|CAD27340.1| lysA-like protein [Erwinia chrysanthemi] gi|306530658|gb|ADN00589.1| Diaminopimelate decarboxylase [Dickeya dadantii 3937] Length = 440 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 109/414 (26%), Positives = 188/414 (45%), Gaps = 12/414 (2%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 + E + + +A + TPFY YS + + T + Y+LKAN N +V++ L Sbjct: 20 YVEEIPVANIADRIGTPFYVYSARQLRRQLQQLRQQLP-TGTAIYYSLKANPNLSVVRAL 78 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 A G+G ++ S EL+ ALAA V + I++ G GK++ + LA+ GI VES +EL Sbjct: 79 AEQGAGCEVCSPAELKTALAAGVSPQHILYVGPGKSLPALKLAIDCGIRAIVVESVTELD 138 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 LN+ A +A R+NPD ++ H ++ K +FG+ +H++ A P + Sbjct: 139 NLNRLAARANTVQTVALRINPDFSS-AHARLVMSGKPTQFGMMRDTLHTVLASLHRWPSI 197 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + G +++G++I ++ + + L LR GG + P Sbjct: 198 SLRGFHVYLGTRILNAQAIADNTRNILQLALDLRDTHRLTLDFVDVGGGFGVPYFPKETP 257 Query: 252 SSSD------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + + +II+E GR+LVA+ G+ VT+V ++K + KTF + D Sbjct: 258 LDLPALGAAIASIVADFRRRAADTQIIIELGRYLVAEAGLFVTRVNTLKTAGGKTFAVCD 317 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALNRKIALPRP 362 N ++ N+ + GD R + GP+C D + N + Sbjct: 318 GGANCHSAAAGLNSMLRKNFPLLRLGDNQGRPLQPYQVSGPLCTPTDLLGDNVLLPTLEV 377 Query: 363 GDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 DL+ I +GAYG S ++ S E+MV+G + +IR T ++L+ Sbjct: 378 DDLIGITHSGAYGLTASPGSFLSFGYPVEVMVDGRRLTLIRQPETTEQLLARQQ 431 >gi|237842559|ref|XP_002370577.1| diaminopimelate decarboxylase, putative [Toxoplasma gondii ME49] gi|211968241|gb|EEB03437.1| diaminopimelate decarboxylase, putative [Toxoplasma gondii ME49] gi|221502696|gb|EEE28416.1| pyridoxal-dependent decarboxylase, putative [Toxoplasma gondii VEG] Length = 564 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 109/462 (23%), Positives = 176/462 (38%), Gaps = 72/462 (15%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGM------------------------------ 51 A + TPFY Y T I +N AF Sbjct: 9 ATIHPTPFYLYDETRIRENCRRLLAAFSWASEPFSTSSQSALENAPRSPRESLENRLGVC 68 Query: 52 -------DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGV 104 +A+KA A+++ L G G D S EL A AA ERI F+ Sbjct: 69 SSYSAAAGFTNYFAVKATPTPAILEILREEGLGADCSSLAELLLAEAAGFRGERIFFTSN 128 Query: 105 GKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANT---HKK 161 ++E A G ++ + +L F + + +T + Sbjct: 129 ETPLEEFLKARDLGAIINLDDASHLDFLHEKFGGALPSILCFRFNPSAESRQSTSQSNPV 188 Query: 162 ISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT 221 I KE KFG+ Q+ + A + + + M + + + E A +L Sbjct: 189 IMGHPKESKFGMTKTQLFHCLSRARSWGVRRFALHTMILSNCLSVDEVVETARLILTVAA 248 Query: 222 QQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILE 274 + G I+ I++GGGLG+ YH + + + + ++ I ++ +++ E Sbjct: 249 EINERLGITIEMINLGGGLGVPYHPEEKDLNLHEVSARIRTWYKCTLALKGLAGTRLVTE 308 Query: 275 PGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL 334 GRF+ AD G+LVT+VI KK+ K F+ +D M MRP +Y AYH I+ + + D Sbjct: 309 NGRFITADAGVLVTRVIHHKKT-YKRFIGVDACMAHLMRPGMYGAYHHISVVPDRDHDDP 367 Query: 335 HIH-----------------------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + D+VG +CE D A++R + GD+L I Sbjct: 368 RLPSRRNLFLSPEDGEEADDVSDDEIYDVVGGLCENNDKFAIDRPLPRVDIGDILLIHDV 427 Query: 372 GAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 GA+G YN RL E + + +IR T ++L Sbjct: 428 GAHGHSMCFNYNGRLRCAEYLRRLNGEVVMIRRAETLKDLFA 469 >gi|254415374|ref|ZP_05029135.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Microcoleus chthonoplastes PCC 7420] gi|196177849|gb|EDX72852.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Microcoleus chthonoplastes PCC 7420] Length = 391 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 83/401 (20%), Positives = 160/401 (39%), Gaps = 18/401 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++L ++ +P Y Y + + A T +A N N A+++ G GL Sbjct: 5 QELLNIYGSPLYVYQGDRLRDTIHYITYAVPYPRTRFQFASVTNGNIALLQIFQQEGWGL 64 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 + G++ L A ++IV+SG E++ L GI N++S S+L Q Sbjct: 65 HGNTPGDIYLGLKAGFAPDKIVYSGSNLNYPEMEQVLHWGITTLNLDSISQLDLCCQVYQ 124 Query: 139 S-LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 S K + + ++ T + ++ + G+++ G+ Sbjct: 125 SLTPKLPRLNLGLRLNVPELTGDSRIGVRPKEFPDA---------LKITQSAGLQLQGIH 175 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY- 256 + G+ + KAF + D ++ + ++D GGG G Y + + Sbjct: 176 FYRGTGT----NATKAFTQVIDSLCEIGQQLPDWDYLDFGGGFGYPYQGNGVTFDWQGFG 231 Query: 257 -ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 A +I+EPGR +A L+ KV+S+K K V +D + + P+ Sbjct: 232 QAITQKLETIGRPIDLIIEPGRAAIAGCASLLAKVVSVKWQNGKQIVGVDTTVANLSVPS 291 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 ++ Y +I + G+ D+ G + D++ N ++ + GD++ I +GAYG Sbjct: 292 VHGGYRKIISFTDNQGE--QYPTDVCGNTTYSRDYLGRNCQLPALKIGDVIAILDSGAYG 349 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 S + R E++V +IR R + L++ Sbjct: 350 YAMSSHFLHRPRPAEVLVEQGTHRLIRKREDYSVLLKNQIF 390 >gi|284047519|ref|YP_003397858.1| Lysine decarboxylase [Acidaminococcus fermentans DSM 20731] gi|283951740|gb|ADB46543.1| Lysine decarboxylase [Acidaminococcus fermentans DSM 20731] Length = 389 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 81/384 (21%), Positives = 151/384 (39%), Gaps = 16/384 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ LA TP S +EKNY + + YA+KAN + ++ L + G+ Sbjct: 13 AVTSLAERYGTPLLVLSLEQVEKNYDILREHIPQL--KIHYAMKANPDLHILDLLINKGA 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S+GE+R V +R++++ K +G+Y +SESE++ + + Sbjct: 71 CFDVASDGEIRTLSQLGVSGDRMIYANPIKLDAGFRACNDAGVYRMTYDSESEIRKIAEH 130 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + KFG P + L A G+ ++G+ Sbjct: 131 CPGATVLLRLRIDNAKA----------HVDLNKKFGCPREKALDLMLKAKE-AGLDVAGI 179 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GSQ + + A + R+L + R+ G +++ +D+GGG I H ++ Sbjct: 180 AFHVGSQTVSADPYFHAMDITRELMAEARARGLSMRVLDIGGGFPIPETGVHYNLTALLD 239 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 +I EPGR++ L+T+VI + + + LD + + Sbjct: 240 QVAARLREDFSDLEIWAEPGRYMCGTAVNLITRVIGENERNGQNWYFLDDGIYGTFSGVI 299 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 +D + D I A GP C++ D + + GDLL + GAY + Sbjct: 300 FDQWDFKLISFK---DGKKIPATFAGPSCDSLDIMFRGKMTEPLEVGDLLLVPVCGAYTS 356 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHI 400 + T+N ++ + + Sbjct: 357 ASATTFNGFKKARTVIWEEVREEL 380 >gi|238064589|ref|ZP_04609298.1| orn/DAP/Arg decarboxylase 2 [Micromonospora sp. ATCC 39149] gi|237886400|gb|EEP75228.1| orn/DAP/Arg decarboxylase 2 [Micromonospora sp. ATCC 39149] Length = 417 Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats. Identities = 101/408 (24%), Positives = 185/408 (45%), Gaps = 12/408 (2%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A TP + Y + + Y + + ++LKAN N ++ L LG+G ++ Sbjct: 2 AREFGTPLFVYDADVLRERYRQLREVL-HPEVGILFSLKANPNVSICAVLRSLGAGAEVS 60 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL A A V E +F G GK+I EID L +G++ ES SEL ++ A Sbjct: 61 SLAELLIAGRAGVAPEDTIFLGPGKSIQEIDACLATGVHAIVCESWSELTEIDALAARRN 120 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 A + R+NP +++ K +FGI Q A + L V+++GV +++G Sbjct: 121 IVARVVLRINPSFTVKG-SRLTMSGKPRQFGIDEEQALEAAARVAGLGNVRLTGVHVYMG 179 Query: 202 SQI-DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 ++I + ++L + ++ +DVGGGLG+AY R + A L+ Sbjct: 180 TRILAEEVVAENTTRILDLAERVAERLDFELETVDVGGGLGVAYFDGERDLNLRRLADLV 239 Query: 261 HQYF-----GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 + F + + ++ E GRFL A+ G + +V +K+S + F + D + M Sbjct: 240 NPAFAAFRARHPRTRLFTELGRFLTAESGTYLVRVRQVKESMGERFAVTDGGTHHHMAAV 299 Query: 316 LYDAYHEINYIVNPAGDRLHIH---ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 ++ + ++ + G + G +C D ++ + + RPGDLL + ++G Sbjct: 300 GIGSFVKRDFPIRLLGREATEPAQNWRVTGLLCTPNDTLSTHTPLPSLRPGDLLGVLRSG 359 Query: 373 AYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 AYG S + S E++V+ + ++IR R ++++ + Sbjct: 360 AYGPTASPVLFLSHGHPAEVLVDAGRPYLIRDRDRPADIVDRQRLYER 407 >gi|186682256|ref|YP_001865452.1| Orn/DAP/Arg decarboxylase 2 [Nostoc punctiforme PCC 73102] gi|186464708|gb|ACC80509.1| Orn/DAP/Arg decarboxylase 2 [Nostoc punctiforme PCC 73102] Length = 414 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 84/403 (20%), Positives = 155/403 (38%), Gaps = 20/403 (4%) Query: 20 KLAHV----VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 KLA +P Y Y+ + + + A T +A N N A++K G Sbjct: 26 KLAQEFLSTYGSPLYVYNGDHLRETIECITKAISYRRTQFRFASVTNGNIALLKIFRSFG 85 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL + G++ L A IV+SG E+ L G+ N++S ++L+ + Sbjct: 86 WGLHANTPGDIYLGLQAGFDPSEIVYSGSNLNRAEMIQVLNWGVTTLNLDSLAQLQLCCK 145 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 +K I + ++ T + E+ FG I + S L + +G Sbjct: 146 VLPKHREK-SIRLGLRLNLPEITGDSRIGVRPEE-FGDAIALTREVGLKLSGLHFYRGTG 203 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + +AF + D + +++D GGG G YH + Sbjct: 204 TNAT------------EAFTQVIDAVIATAQLLPDWEYLDFGGGFGYPYHHNKTAFDWEV 251 Query: 256 YASL--IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + + +++EPGR +A L+ +V+S+K +K + +D + + Sbjct: 252 FGAELSERITHLGRKIDLVIEPGRSAIAGCATLLAQVVSVKWQGEKQIIGVDTTVANLSV 311 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P+++ Y EI R DI G + D++ N ++ GD++ I GA Sbjct: 312 PSVHGGYREIFTWKQADNLRSLFTTDICGNTTYSRDYLGKNCQLPALEIGDIVAILDVGA 371 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 YG S + R E+++ +IR R + L+ + Sbjct: 372 YGYAMSSHFLHRPKPAEVLLENGTHRLIRRREDYSVLLTNQVL 414 >gi|281211811|gb|EFA85973.1| group IV decarboxylase [Polysphondylium pallidum PN500] Length = 427 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 86/396 (21%), Positives = 141/396 (35%), Gaps = 13/396 (3%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TPF+ Y I +N +AF +A+KA N ++ L +G G+D S Sbjct: 27 TPFHLYHGDRILENGKKMLSAFRQYFPSYTNFFAVKATPNPHILSLLKSIGMGVDCSSLA 86 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 EL A + I+F+ E A + G + + + + Sbjct: 87 ELLLAEKVGLKGNEIMFTSNNTPKSEYIKAYELGATINLDDITQIDYLHDALGGKMPEMV 146 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + + P +E KFG+ Q+ YA +L + M +++ Sbjct: 147 SLRYNPGP---LKNGNCFIGKPQEAKFGLTGEQLFEAYAKLKSLGVSRFGLHCMVASNEL 203 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--- 261 A L L + + +++GGG+GI Y D A LI Sbjct: 204 KLEYFEETAVLLFETLVAVAKKLDIGFEMVNLGGGIGIPYRLDQTAVDFYRLAQLIDGQF 263 Query: 262 -----QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 I+ E GR + G+LVTK I K + + N Sbjct: 264 QKIVVPAQLKQLPSIVTECGRVVTGPYGVLVTKAIHSKSIYREYIGVDACMANLMRPGMY 323 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 ++ D+ DIVG +CE D A++R++ + D++ I TGA+G Sbjct: 324 NAYHYMSVLDSEKRDDQTTKKYDIVGSLCENNDKFAVDRELPVISRDDVIIIHDTGAHGH 383 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 YN +L E ++ G Q IR T+ +L Sbjct: 384 SMGFNYNGKLRSAEYILLGDQIKCIRRAETYDDLFR 419 >gi|71278455|ref|YP_269580.1| Orn/DAP/Arg decarboxylase family protein [Colwellia psychrerythraea 34H] gi|71144195|gb|AAZ24668.1| Orn/DAP/Arg decarboxylase, family 2 [Colwellia psychrerythraea 34H] Length = 461 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 100/421 (23%), Positives = 165/421 (39%), Gaps = 29/421 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGSGL 78 L +P Y S + +++ F +F + T V Y++K N AV L G+ Sbjct: 44 LLQKFGSPLYVVSEQRLRQDFKNFKRSFSDEHVKTKVAYSIKTNYLPAVCAILRQEGAQA 103 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 ++VS E A +P + I+F+G KT E+ LAL G N+++ +EL+ +++ + Sbjct: 104 EVVSGMEYELARTLGIPGKDIIFNGPHKTQSELKLALSEGAL-VNIDNFNELEHIDRISE 162 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 L A +A RVN N + F + + + ++ G Sbjct: 163 ELITPARVAIRVNFRYGTNPWT-------KFGFNNENGESLNALKKIARNKKLQFEGFHC 215 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---- 254 H+G+ + E + A + L +L +Q R G N ID+GGG A Sbjct: 216 HVGTFVLVHELYANAVEKLIELAKQAREIGLNPTSIDIGGGFPSANTLRPEYDLPGGSQR 275 Query: 255 -------DYASL------IHQYFGNLQCKIILEPGRFLV-ADVGILVTKVISIKKSADKT 300 YA H +ILEPGR +V A +L T + + + Sbjct: 276 ANNDYLLPYAEHIFGQLRKHSELFGNNPTLILEPGRAIVDASTQLLSTVIAKKEIVGGRN 335 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 VI+D +N Y+ + L DI GP+C D + + Sbjct: 336 AVIIDAGVNLVPTVCYYNHQIKTVAATKSEERGLLKPVDIFGPLCMQSDRLREQILMPAL 395 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 GD L I GAY QS + + I++ +IR T++++ LD +P L Sbjct: 396 NVGDHLSIGNVGAYCHTQSNQFI-QPRPATILLGEHGPELIRRAETYKDIFALDLLPGRL 454 Query: 421 Q 421 + Sbjct: 455 R 455 >gi|121998344|ref|YP_001003131.1| Orn/DAP/Arg decarboxylase 2 [Halorhodospira halophila SL1] gi|121589749|gb|ABM62329.1| Orn/DAP/Arg decarboxylase 2 [Halorhodospira halophila SL1] Length = 411 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 106/405 (26%), Positives = 170/405 (41%), Gaps = 16/405 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F +G L + V + +LA TPF+ Y I+ + + YA+ Sbjct: 11 MEVFSIQDGELTLQGVPVTQLAESAGQTPFFAYDRAMIDHRVAALRATLP-PEIHLHYAI 69 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN +++ LA + GLD+ S GEL AL I +G GK E+ AL+SG+ Sbjct: 70 KANPMPELVQHLARMVDGLDVASAGELALALETETAPADISIAGPGKQDHELARALESGV 129 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 EL+ L + A G+ +A R+NPD T G + +FGI Q Sbjct: 130 TINLESPG-ELERLAELANRHGRTPSVAIRINPDFTLKTSGMQMGGGPK-QFGIDTEQAP 187 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGG 238 ++ L G + GSQ ++ A + +L +L + +++GG Sbjct: 188 AVLHRIGELSF-DFRGFQIFAGSQNLNTDALITAQNGIFELFNRLADEAPAPVTLLNMGG 246 Query: 239 GLGIAYHSDHRPPSSSDYASLIH-----QYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 GLGI Y ++ RP Y +H +I+LE GR+LV + G+ V +VI Sbjct: 247 GLGIPYFANDRPLDLDRYGEHLHRHVAACRQRFPNVQIVLELGRYLVGEAGVYVVRVIDR 306 Query: 294 KKSADKTFVILDVAMNDFMRPT----LYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S + F++ D M+ + + + +VGP+C D Sbjct: 307 KVSRGQVFLVTDGGMHHHLAASGNLGQTIRRDYPIALATAMDHPAAEDVSVVGPLCTPLD 366 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS-RLLIPEIMV 393 + + +PGDL+ + ++GAYG S TY E++V Sbjct: 367 VLGSRVPLPYAKPGDLIVVFQSGAYGLSASPTYFLNHPKAAELLV 411 >gi|320160946|ref|YP_004174170.1| diaminopimelate decarboxylase [Anaerolinea thermophila UNI-1] gi|319994799|dbj|BAJ63570.1| diaminopimelate decarboxylase [Anaerolinea thermophila UNI-1] Length = 431 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 109/413 (26%), Positives = 171/413 (41%), Gaps = 19/413 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQ 65 G ++ + +LA TP Y Y I N T + ++++ YA KA + Sbjct: 18 GRINLSGFDILELAEKYSTPLYIYDAHTIFHNIDTLKDTLKKYYPGESIITYAAKAYFSL 77 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + +A G+D VSE EL AL A + ERI G KT E+D A+Q+ I+ ++ Sbjct: 78 RFAQFIAKTEVGIDAVSENELIFALRAGIKPERIHLHGNNKTYAELDHAVQANIHAIVID 137 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINA-NTHKKISTGKKEDKFGIPIH--QIHSLY 182 + E + +R + RVNP+I+ TH +TG KFG+ I Q + Sbjct: 138 NF-EDIEILERLSHKKSPISVWIRVNPEIDEIATHPYRNTGHSVSKFGLTIRDGQAETAI 196 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 P ++ G+ HIGSQI + +A + L ++ + GGG G+ Sbjct: 197 RMLMANPNFRLIGIHTHIGSQIFDTAPYKQAIGEMLKLARRCNW---IPAEVCPGGGWGV 253 Query: 243 AYHSDHR-------PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-ISIK 294 Y D N ++ILEPGR++VA GI + V + Sbjct: 254 PYRHDEMINNNIENWIREISIVIQEEYRGSNFLPRLILEPGRWIVARAGIAIYTVGRVKQ 313 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 S + + +D M D +RP LY A +E NP G IVG CE+GD + Sbjct: 314 FSNGEKLLAVDGGMGDNIRPPLYQAEYEAIVAENPLGS-PTTCYRIVGRFCESGDELIHE 372 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 + + G+ L +GAY + YN + V ++++ R Sbjct: 373 IDLPEVQTGNHLIFPVSGAYHLSMASNYNLFARPAVLWVENGSVNVLQERENL 425 >gi|196232014|ref|ZP_03130869.1| diaminopimelate decarboxylase [Chthoniobacter flavus Ellin428] gi|196223736|gb|EDY18251.1| diaminopimelate decarboxylase [Chthoniobacter flavus Ellin428] Length = 429 Score = 187 bits (474), Expect = 4e-45, Method: Composition-based stats. Identities = 102/420 (24%), Positives = 155/420 (36%), Gaps = 25/420 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L LA V TPF+ Y I + D +A+KA V+K + Sbjct: 8 LRSLAEKVGTPFWLYDARVIRQRIADIQFLTDTEGVQARFAMKACPATKVLKEMKAANIW 67 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS E+ RAL A P + T D + + Sbjct: 68 IDAVSGNEVLRALRAGHPTGHQPP-VICLTCDVFRDNALPVVLENGILPNIGSPGQIADL 126 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G PI+ RVNP TG K GI + + + A G++I+ + Sbjct: 127 KKAGYSGPISVRVNPGFGHGHVNACDTGGPSSKHGIWLEDLFATKEMADK-AGLEITMLH 185 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 HIGS Q + H L L + I +GGG+ Y Sbjct: 186 AHIGSG-PQFQELHDNLTRLAAEFVTLLEKFTKVNTISLGGGIPHNYRDHGAQVPIEPLH 244 Query: 258 SLIHQYFG------NLQCKIILEPGRFLVADVGILVTKVISIKKSA------DKTFVILD 305 L ++ +EPGR+ VA LVT+V +K++ TF ++D Sbjct: 245 ELFASCHQRLVSKARRDLRLEIEPGRYYVAPGCTLVTRVTDVKQTRSNEKGSGATFAMVD 304 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDR--LHIHADIVGPICETGDFIALN-------RK 356 D +RP +Y +YH I+ + D + GP+CE+GD + R Sbjct: 305 AGFVDLVRPAMYGSYHAIDIVGKDDEDPNVPREPIVVAGPLCESGDIFTRDDRELLAPRL 364 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIELDS 415 + P GDLL + GAYG S YNS P++ + + II R +L++ ++ Sbjct: 365 LPRPAAGDLLTLRDAGAYGYAMSSNYNSIGRAPQLWLEDDGSVEIISRRENIDDLLKAET 424 >gi|330468944|ref|YP_004406687.1| diaminopimelate decarboxylase [Verrucosispora maris AB-18-032] gi|328811915|gb|AEB46087.1| diaminopimelate decarboxylase [Verrucosispora maris AB-18-032] Length = 422 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 93/417 (22%), Positives = 165/417 (39%), Gaps = 14/417 (3%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 V + +L TP Y Y I Y + Y+LKAN N +V L Sbjct: 8 GGVPVTELVERFGTPLYVYDGATITDRYQQLRERL-HPAVRMFYSLKANPNISVCALLHS 66 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 LG+ ++ S EL A A VPAE I+F G GK+ E+ A G ES EL + Sbjct: 67 LGASAEVSSLTELVTAERAGVPAEDIMFLGPGKSRTEL-TACLKGEVTLICESLGELALI 125 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 ++ A LG A + RVNP K +FGI + + A P V++ Sbjct: 126 DELAAELGTTARVVLRVNPSFAVKGSGLTMG-GKPRQFGIDEAALLAESDLAGRHPSVRL 184 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-----GHNIQHIDVGGGLGIAYHSDH 248 G ++G++ + + DL ++L + +G Sbjct: 185 CGFQAYLGTRFLSEAMIVENTARILDLAERLSQHLAVDLEVVDVGGGLGVAYFAGEQDLD 244 Query: 249 RPPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + + + + + +++E GR+LV G +V +K+S + F + D Sbjct: 245 VAALTDQLNPVFAAFHARHPRTVLVMELGRYLVGHSGTYAVQVRYVKESMGERFAVADGG 304 Query: 308 MNDFMR---PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPG 363 N M + + ++N + ++ GP+C D I ++ RPG Sbjct: 305 TNHHMAAVGIGSFVKRNFPMRLLNRDSTAEPVKWNVTGPLCTPNDTIGKAVELPADVRPG 364 Query: 364 DLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 D++ +E++GAYG S + S E++++ + ++R R + ++ + + Sbjct: 365 DVIGVERSGAYGPTASPVHFLSHGYPAEVLIHEGEPRLVRTRDDVESMLAAQILHDF 421 >gi|28198325|ref|NP_778639.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xylella fastidiosa Temecula1] gi|182680964|ref|YP_001829124.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xylella fastidiosa M23] gi|28056395|gb|AAO28288.1| diaminopimelate decarboxylase [Xylella fastidiosa Temecula1] gi|182631074|gb|ACB91850.1| aspartate kinase [Xylella fastidiosa M23] gi|307579432|gb|ADN63401.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 868 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 106/371 (28%), Positives = 177/371 (47%), Gaps = 17/371 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y + + NA +D YA+KAN + A+++TL G GL+ VS GELR Sbjct: 510 PCYVYHLPTVRERARQL-NAVAAVD-QCYYAIKANPHPAILRTLIEEGFGLECVSLGELR 567 Query: 88 RALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 R++F+ + E + A G+ E + + ++ Sbjct: 568 HVFEVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVE-----ALRLWPEVFRERT 622 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R++ H+K++TG K KFG+ + +I A TL ++G+ H+GS ++ Sbjct: 623 LWLRIDLGYGDGHHEKVTTGGKTSKFGLSVTRIDEFIDVAKTLNIT-VTGLHAHLGSGVE 681 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQYF 264 + + + L ++ S + +D+GGGL I Y D P + ASL Sbjct: 682 SGNHWSRMYDELAGFASRIGS----VSTLDIGGGLPIPYRPDDEPFDVGAWGASLAEVKA 737 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + + ++++EPGRFLVA+ G+L+T+V + + D V L+ M+ +RP LYDA+ Sbjct: 738 LHPKFQLVIEPGRFLVAEAGVLLTRVTQVIEKDDILRVGLEAGMHTLIRPALYDAW-HGV 796 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP-RPGDLLYIEKTGAYGAVQSGTYN 383 + + H+ D+VGPICE+ D R + GDL+ I GAYG + TYN Sbjct: 797 ENLTRLDETPHVLCDVVGPICESSDVFGRRRHLPAATASGDLMLIADAGAYGFSMASTYN 856 Query: 384 SRLLIPEIMVN 394 R L E++++ Sbjct: 857 LRGLPAEVVLD 867 >gi|323141851|ref|ZP_08076715.1| lysine/ornithine decarboxylase [Phascolarctobacterium sp. YIT 12067] gi|322413691|gb|EFY04546.1| lysine/ornithine decarboxylase [Phascolarctobacterium sp. YIT 12067] Length = 401 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 84/400 (21%), Positives = 159/400 (39%), Gaps = 19/400 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS + ++EKLA TP S I+KNY + YA+K Sbjct: 1 MSN----KKHFQISQQAVEKLAVRFGTPLLVLSLEEIKKNYKVLKKYMPR--VKIHYAIK 54 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN + +++ +A +GS D+ S+GE+R V R++++ KT ++ G+ Sbjct: 55 ANPHPEILRVMADMGSCFDVASDGEIRTMHDMGVDGGRLIYANPVKTGVGLEACRSCGVR 114 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 +S SE+ + ++ + R+ D ++ KFG + Sbjct: 115 KMTFDSASEIDKIKKQCPDAT----VLLRLRIDNSSAHVD------LNKKFGAARENALA 164 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L A G+ ++G+ H+GSQ + + A + R+L ++ + G ++ +DVGGG Sbjct: 165 LMQQAKE-AGLDMAGIAFHVGSQTVSADPYLHALDIARELFEEAEAAGLKLRILDVGGGF 223 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 I +I EPGR++ L+T VI + + + Sbjct: 224 PIPEPKVKFNLPEMLRQINARLDEDFADAEIWAEPGRYICGTAVNLITSVIGVTERGGQP 283 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 + L+ + L+D + +++ + A GP C++ D + R Sbjct: 284 WYFLNEGLYGTFSGVLFDQWD--FKLISFREGEEKVAATFAGPSCDSLDIMFRGRLTVPL 341 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHI 400 + GDLL + GAY + + T+N ++ + + Sbjct: 342 QVGDLLLVPSCGAYTSASATTFNGFSKAKFVIWERVKAEV 381 >gi|71897691|ref|ZP_00679936.1| Aspartate kinase [Xylella fastidiosa Ann-1] gi|71732594|gb|EAO34647.1| Aspartate kinase [Xylella fastidiosa Ann-1] Length = 868 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 107/371 (28%), Positives = 180/371 (48%), Gaps = 17/371 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y + + NA +D YA+KAN + A+++TL G GL+ VS GELR Sbjct: 510 PCYVYHLPTVRERARQL-NAVAAVD-QCYYAIKANPHPAILRTLIEEGFGLECVSLGELR 567 Query: 88 RALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 A R++F+ + E + A G+ E + + ++ Sbjct: 568 HAFEVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVE-----ALRLWPEVFRERT 622 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R++ H+K++TG K KFG+ + +I A TL ++G+ H+GS ++ Sbjct: 623 LWLRIDLGYGDGHHEKVTTGGKTSKFGLSVKRIDEFIDVAKTLNIT-VTGLHAHLGSGVE 681 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQYF 264 + + + + L ++ S + +D+GGGL I Y D P + ASL Sbjct: 682 RGNHWSRMYDELAGFASRIGS----VSTLDIGGGLPIPYRPDDEPFDVGAWGASLAEVKA 737 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + + ++++EPGRFLVA+ G+L+T+V + + D V L+ M+ +RP LYDA+ Sbjct: 738 LHPKFQLVIEPGRFLVAEAGVLLTRVTQVIEKDDILRVGLEAGMHTLIRPALYDAW-HGV 796 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP-RPGDLLYIEKTGAYGAVQSGTYN 383 ++ + H+ D+VGPICE+ D R + GDL+ I GAYG + TYN Sbjct: 797 ENLSRLDETPHVLCDVVGPICESSDVFGRRRHLPAATASGDLMLIADAGAYGFSMASTYN 856 Query: 384 SRLLIPEIMVN 394 R L E++++ Sbjct: 857 LRGLPAEVVLD 867 >gi|30248913|ref|NP_840983.1| Orn/DAP/Arg decarboxylase family protein [Nitrosomonas europaea ATCC 19718] gi|30138530|emb|CAD84820.1| Orn/DAP/Arg decarboxylases family 2 [Nitrosomonas europaea ATCC 19718] Length = 391 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 80/382 (20%), Positives = 145/382 (37%), Gaps = 20/382 (5%) Query: 15 NVSLEK--LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 ++SL + L Q PF + I F + YA KAN + V+KTL Sbjct: 27 DLSLVEARLKQGYQKPFLLIDSNIIRNKARRFKTSMPR--VRPHYAAKANPDPRVLKTLI 84 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G G +I S EL ++ VPA I +S K+ I+ A G+ + ++S EL+ Sbjct: 85 EEGVGFEIASIAELDLLMSLGVPAAEIFYSNPMKSRAYIEYAAAKGVEWYVLDSIEELRK 144 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + I + +T S KFG + + + A L Sbjct: 145 I----------VSIKPDAKLYLRIDTPNIGSDWPLAGKFGTHLVDVSEIIDEAVRLK-AD 193 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++GV H+GSQ +++ + + + +R G + +++GGG + + Sbjct: 194 LAGVTFHVGSQCRNPQNWRVGIERAQTVFASMREAGLKPRLLNLGGGYPVRHVKPIPSIE 253 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 ++ EPGR+LV+D V +V+ K ++ D + + Sbjct: 254 VIAEVINEAIADLPEDIHVMAEPGRYLVSDSACFVCRVVGTATRNGKRWMYWDAGIFGGI 313 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKT 371 +EI N I + GP C++ D + + + + D ++I Sbjct: 314 IEVSEGLRYEILTQRN----GSLIPWSVAGPTCDSVDVLMHDEMLPEDIQENDFIFIPNA 369 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + +N L +++ Sbjct: 370 GAYTTSYASNFNGFPLPDVVVI 391 >gi|269960557|ref|ZP_06174929.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834634|gb|EEZ88721.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 483 Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats. Identities = 116/435 (26%), Positives = 191/435 (43%), Gaps = 17/435 (3%) Query: 1 MSAFKYFE---GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY 57 M FK+ G E V+ +LA + TPFY YS + + T + Y Sbjct: 42 MHLFKFETPAIGVHGIEGVTYPQLAQSIGTPFYAYSRAQLTHDLQTLKSTMPQA-LTFYY 100 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 +LKAN N +++K + G G ++ S EL AL A + I+F G GK+ E+ ++ Sbjct: 101 SLKANPNLSLVKIIHQQGVGCEVCSLTELETALNAGASVQDIIFVGPGKSDKELTRCVEL 160 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 GI VES +EL+ L A GK AFR+NP+ + ++ K +FGI Sbjct: 161 GIKAVVVESLNELQRLETVASRAGKYQAFAFRINPNFTS-EKARLVMSGKPRQFGIDEDI 219 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIES-FHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + + P + ++G+ +++G++I ++ +L T+ + +DV Sbjct: 220 VMAALNQLERYPHLTLTGIHVYLGTRILDAQAVIENTRNILSLATRIEAKLDRPLGFVDV 279 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYF-----GNLQCKIILEPGRFLVADVGILVTKVI 291 GGGLGI Y+ + A + + + ++I+E GR+++A G+ +T V Sbjct: 280 GGGLGIPYYPKEQFLDLDATALGLRPLIAQFKADHPETRLIMELGRYIIARSGVFITAVR 339 Query: 292 SIKKSADKTFVILDVAMNDFM----RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 IK S KTF I D N ++ I + P I GP+C Sbjct: 340 DIKTSKGKTFAICDGGSNCHGAAAGLGSVIRKNFPIRRLGTPIEGEPREDYMITGPLCTP 399 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMT 406 D I + + + GDLL + +GAYG S + S E+++ G IR Sbjct: 400 TDLIGDSVVLPQLQSGDLLGVFHSGAYGPTASPVNFLSFGQPAEVLIEGDTAIQIRRAEC 459 Query: 407 FQELIELDSIPAWLQ 421 F+ +IE +P +Q Sbjct: 460 FRYVIE-QQVPLRVQ 473 >gi|71899469|ref|ZP_00681627.1| Aspartate kinase [Xylella fastidiosa Ann-1] gi|71730782|gb|EAO32855.1| Aspartate kinase [Xylella fastidiosa Ann-1] Length = 868 Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 17/371 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y + + ++ +D YA+KAN + A+++TL G GL+ VS GELR Sbjct: 510 PCYVYHLPTVRERARQLNSV-AAVDQR-YYAIKANPHPAILRTLIEEGFGLECVSLGELR 567 Query: 88 RALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 A R++F+ + E + A G+ E + + + Sbjct: 568 HVFAVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVE-----ALRLWPEVFRDRT 622 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R++ H+K++TG K KFG+ + +I A TL ++G+ H+GS ++ Sbjct: 623 LWLRIDLGYGDGHHEKVTTGGKTSKFGLSVKRIDEFIDVAKTLNIT-VTGLHAHLGSGVE 681 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQYF 264 + + + + L ++ S + +D+GGGL I Y D P + ASL Sbjct: 682 RGNHWSRMYDELAGFASRIGS----VSTLDIGGGLPIPYRPDDEPFDVGAWGASLAEVKA 737 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + + ++++EPGRFLVA+ G+L+T+V + + D V L+ M+ +RP LYDA+ Sbjct: 738 LHPKFQLVIEPGRFLVAEAGVLLTRVTQVIEKDDILRVGLEAGMHTLIRPALYDAW-HGV 796 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP-RPGDLLYIEKTGAYGAVQSGTYN 383 ++ + H+ D+VGPICE+ D R++ GDL+ I GAYG + TYN Sbjct: 797 ENLSRLDETPHVLCDVVGPICESSDVFGRRRRLPAATASGDLMLIADAGAYGFSMASTYN 856 Query: 384 SRLLIPEIMVN 394 R L E++++ Sbjct: 857 LRGLPAEVVLD 867 >gi|71276047|ref|ZP_00652328.1| Aspartate kinase [Xylella fastidiosa Dixon] gi|170729669|ref|YP_001775102.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xylella fastidiosa M12] gi|71163130|gb|EAO12851.1| Aspartate kinase [Xylella fastidiosa Dixon] gi|167964462|gb|ACA11472.1| aspartate kinase / diaminopimelate decarboxylase [Xylella fastidiosa M12] Length = 868 Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 17/371 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y + + ++ +D YA+KAN + A+++TL G GL+ VS GELR Sbjct: 510 PCYVYHLPTVRERARQLNSV-AAVDQR-YYAIKANPHPAILRTLIEEGFGLECVSLGELR 567 Query: 88 RALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 A R++F+ + E + A G+ E + + + Sbjct: 568 HVFAVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVE-----ALRLWPEVFRDRT 622 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R++ H+K++TG K KFG+ + +I A TL ++G+ H+GS ++ Sbjct: 623 LWLRIDLGYGDGHHEKVTTGGKTSKFGLSVKRIDEFIDVAKTLNIT-VTGLHAHLGSGVE 681 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQYF 264 + + + + L ++ S + +D+GGGL I Y D P + ASL Sbjct: 682 RGNHWSRMYDELAGFASRIGS----VSTLDIGGGLPIPYRPDDEPFDVGAWGASLAEVKA 737 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + + ++++EPGRFLVA+ G+L+T+V + + D V L+ M+ +RP LYDA+ Sbjct: 738 LHPKFQLVIEPGRFLVAEAGVLLTRVTQVIEKDDILRVGLEAGMHTLIRPALYDAW-HGV 796 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP-RPGDLLYIEKTGAYGAVQSGTYN 383 ++ + H+ D+VGPICE+ D R++ GDL+ I GAYG + TYN Sbjct: 797 ENLSRLDETPHVLCDVVGPICESSDVFGRRRRLPAATASGDLMLIADAGAYGFSMASTYN 856 Query: 384 SRLLIPEIMVN 394 R L E++++ Sbjct: 857 LRGLPAEVVLD 867 >gi|294055339|ref|YP_003548997.1| Diaminopimelate decarboxylase [Coraliomargarita akajimensis DSM 45221] gi|293614672|gb|ADE54827.1| Diaminopimelate decarboxylase [Coraliomargarita akajimensis DSM 45221] Length = 421 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 93/418 (22%), Positives = 167/418 (39%), Gaps = 33/418 (7%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++A +P Y Y ++ N + YA+KA+ N A+++ G + Sbjct: 16 RQIADQFGSPVYVYDMATLKANAADVLAFPNAYGLTARYAMKASPNAAILRIFNEAGLHI 75 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S E+RRA+AA E+I S D +L S+ E Sbjct: 76 DASSGYEVRRAIAAGYTPEKISLSTQELPTDFAELYELGIEINACSLSQLERFGQA---- 131 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 I R NP + + + + G FGI I + + +K+ + Sbjct: 132 --FPGRSIGVRFNPGAGSGGNNRTNVGGPASSFGIWHEWIDQVQEIVARYD-LKVIRIHT 188 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGS S K ++ + ++ +L ++ +++GGG +A +D Sbjct: 189 HIGSG-----SDPKVWQKISSMSLELVRQFPDVVSLNLGGGYKVARMADEVSTDLQQCGE 243 Query: 259 LIHQYFGNL------QCKIILEPGRFLVADVGILVTKVISIKKSA--DKTFVILDVAMND 310 + F + ++ +EPG +L+A+ +++ V + F+ L+ M + Sbjct: 244 PVADKFREFAAETGREIRLEIEPGTYLLANACSVLSMVQDKVSTGREGYEFLKLNTGMTE 303 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN---------RKIALPR 361 +RP++Y A H +I+ A I G CE+GD + R + + Sbjct: 304 VLRPSIYGAQHP-IFILKEATPTETCDYMIAGHCCESGDILTPASGDPELLATRTLPVTE 362 Query: 362 PGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNG-SQFHIIRPRMTFQELIELDSIP 417 GDL I+ +GAY + S YNS E+M++ ++ H+IR R Q L + +P Sbjct: 363 IGDLCVIDGSGAYCSAMSTKNYNSYPEAAEVMLDEANRPHLIRKRQDPQALWANE-LP 419 >gi|217077735|ref|YP_002335453.1| ornithine decarboxylase [Thermosipho africanus TCF52B] gi|217037590|gb|ACJ76112.1| ornithine decarboxylase [Thermosipho africanus TCF52B] Length = 387 Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats. Identities = 92/395 (23%), Positives = 163/395 (41%), Gaps = 19/395 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L+ LA TP + NY ++ + YA+KANS+ ++K L LGS Sbjct: 10 LKALAEKHGTPILVMDLEVVRDNYKRLVENVK--NSKIYYAVKANSHIEILKLLRDLGSY 67 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+ S E+ + L+ V ER+ F K +I A + GI F V+SE E++ + + A Sbjct: 68 FDVASRPEIEKLLSIGVEPERMSFGNTIKKSSDIAFAYEKGIKMFAVDSEMEIEKIAKNA 127 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 I + N + + KFG + SL YA +L + GV Sbjct: 128 PGSDIYVRI--------STNGMEDDADWPLTKKFGTSVDHAISLVKYAYSLG-LNPIGVS 178 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 H+GSQ E++ A + + + ++ R G ++ ++ GGG+ + Y + Sbjct: 179 FHVGSQNYNPENWRVAIREVSVVFEEARRMGIEMKMVNTGGGMPVKYSKNIPTVEEISAV 238 Query: 258 SLIHQYFGN-LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 +ILEPGR +V + G ++T VI + ++ ++ D + + T+ Sbjct: 239 INEAIADYIGEDVTVILEPGRSMVGNAGTMITSVILRSQKGEEKWIYTDAGVFHGLTETI 298 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYG 375 + +E+ I D + GP C++ D + + + DL+ + TGAY Sbjct: 299 QNIRYEVEVIGK--EDEEKEKFVLAGPTCDSVDVMYYDINLPKTTTMDDLVVLYNTGAYT 356 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 +N I + I + F+E+ Sbjct: 357 TEYGTNFNGIPSPKIIF----ESSIFVKQELFEEV 387 >gi|30249115|ref|NP_841185.1| Orn/DAP/Arg decarboxylase family protein [Nitrosomonas europaea ATCC 19718] gi|30138732|emb|CAD85037.1| Orn/DAP/Arg decarboxylases family 2 [Nitrosomonas europaea ATCC 19718] Length = 409 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 103/405 (25%), Positives = 170/405 (41%), Gaps = 16/405 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQT-PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M+ F L ++ L +LA + T PFY Y I + YA+ Sbjct: 9 MTQFPIRNHCLVIGDLPLTRLAQRIGTTPFYAYDRKLISARIQFLRQHLP-AGIHLHYAM 67 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN AV++ LA L G+D+ S GE++ AL A + E I F+G GK+ E+ A+ +GI Sbjct: 68 KANPMPAVVQHLAGLVDGMDVASVGEMKVALDAGITPENISFAGPGKSRQELICAIAAGI 127 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 EL+T+ Q A G + +A RVNPD + G +FGI + Sbjct: 128 VINVESEY-ELETIAQLAEETGFQPKVAVRVNPDFELKSSGMKMGGG-SKQFGIDAECVP 185 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 ++ + L G+ + GSQ ++E+ +A + L QL S GG Sbjct: 186 AVLQRIAQL-RFDFEGLHIFSGSQNLRVEALREAHEKTLQLGLQLASTSPVPVRAINIGG 244 Query: 240 LGIAYHSDHRPPSSSDYASLI------HQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 + P + + ++E GR++VA+ GI V +V+ Sbjct: 245 GFGVPYFPGESPLDLNAVGTNLQRLLAEIPSQFSAIRFVIELGRYIVAEAGIYVCRVLEK 304 Query: 294 KKSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S +TF++ + ++ + I N +VGP+C D Sbjct: 305 KISRGQTFLVTNGGLHHHLAASGNFGQVIRKNYPVAIGNKMKIDETEIVSVVGPLCTPLD 364 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 +A +++ PGDL+ + ++GAYG S T + S E+++ Sbjct: 365 LLADRMELSRAEPGDLVVVFQSGAYGLTASPTAFLSHPASLEVLI 409 >gi|15837718|ref|NP_298406.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xylella fastidiosa 9a5c] gi|9106073|gb|AAF83926.1|AE003947_6 bifunctional diaminopimelate decarboxylase/aspartate kinase [Xylella fastidiosa 9a5c] Length = 868 Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 177/371 (47%), Gaps = 17/371 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y + + NA +D YA+KAN + A+++TL G GL+ VS GELR Sbjct: 510 PCYVYHLPTVRERARQL-NAVAAVDQR-YYAIKANPHPAILRTLIEEGFGLECVSLGELR 567 Query: 88 RALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 A R++F+ + E + A G+ E + + + Sbjct: 568 HVFAVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVE-----ALRLWPEVFRDRT 622 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R++ H+K++TG K KFG+ + +I A TL + ++G+ H+GS ++ Sbjct: 623 LWLRIDLGYGDGHHEKVTTGGKTSKFGLSVTRIDEFIDVAKTLNII-VTGLHAHLGSGVE 681 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + + + + L ++ S + +D+GGGL I Y D P + + + Sbjct: 682 RGDHWSRMYDELAGFASRIGS----VSTLDIGGGLPIPYRPDDEPFDVEAWGVSLAEVKA 737 Query: 266 NLQC-KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 ++++EPGRFLVA+ G+L+T+V + + V L+ M+ +RP LYDA+ Sbjct: 738 LHPKLQLVIEPGRFLVAEAGVLLTRVTQVIEKDGIRRVGLEAGMHTLIRPALYDAW-HDV 796 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP-RPGDLLYIEKTGAYGAVQSGTYN 383 ++ + H+ D+VGPICE+ D R + GDL+ I GAYG + TYN Sbjct: 797 ENLSRLDEIPHVLCDVVGPICESSDVFGRCRHLPAATASGDLMLIADAGAYGFSMASTYN 856 Query: 384 SRLLIPEIMVN 394 R L E++++ Sbjct: 857 LRGLPAEVVLD 867 >gi|145355995|ref|XP_001422228.1| Diaminopimelate decarboxylase [Ostreococcus lucimarinus CCE9901] gi|144582468|gb|ABP00545.1| Diaminopimelate decarboxylase [Ostreococcus lucimarinus CCE9901] Length = 471 Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 95/422 (22%), Positives = 161/422 (38%), Gaps = 36/422 (8%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLG 75 +A TP Y Y ++ + AF V YA+KA+ N A++KT G Sbjct: 59 DARDVAETHGTPTYVYDRATLDAQAAR-ARAFPNAYGLTVRYAMKASPNAAILKTFKKAG 117 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +D S E RA+ A I S DL + + E Sbjct: 118 LHVDASSGYECERAMKAGFEGGEISLSTQELPRFFEDLVRRGVKVNACSLDQLER----- 172 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R NP + + K + G FGI + + +K+ Sbjct: 173 -FGRAFPGGEVGVRFNPGLGSGGTGKTNVGGPSSSFGIWFESLPRVKEIVEQYD-LKVVR 230 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V HIGS S ++ + ++ L ++ +++GGG + S + + Sbjct: 231 VHTHIGSG-----SDPAVWQKVSGMSLDLCREFPSVDTLNLGGGYKVGRMSYEKSTDLAV 285 Query: 256 YASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSA---DKTFVILDV 306 + + F + +EPG FL+A+ +VT V + TF+ LD+ Sbjct: 286 VGVPVKEAFEAFAKETGRKLKLEIEPGTFLLANSCAVVTSVQDKVVTGTAEGHTFLKLDM 345 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAG-DRLHIHADIVGPICETGDFIA---------LNRK 356 M + +RP+LY + H + + +VG CE+GD + R+ Sbjct: 346 GMTEVLRPSLYGSQHPLVSVSKAGELPAAQADYVVVGHCCESGDLLTPAPDEPETISERR 405 Query: 357 IALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIM--VNGSQFHIIRPRMTFQELIEL 413 + GD + IE +GAY A S YNS PE+M +G+ F +IR + T ++++ Sbjct: 406 MGEVNIGDYVVIEGSGAYCAGMSSKNYNSFPEAPEVMRLADGAGFAVIRRKQTLEQILAN 465 Query: 414 DS 415 + Sbjct: 466 EV 467 >gi|300114365|ref|YP_003760940.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus watsonii C-113] gi|299540302|gb|ADJ28619.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus watsonii C-113] Length = 410 Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 108/404 (26%), Positives = 169/404 (41%), Gaps = 16/404 (3%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 F + L V L K A V TPFY Y I + + + YALK Sbjct: 11 DYFPVKDDCLLVGGVPLTKFAARVGSTPFYAYERRLISERIRHLRAHLP-SEIYIHYALK 69 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN A+ +A L GLD+ S GEL+ AL A + + I F+G GK+ E+ +L +GI Sbjct: 70 ANPMPALAGHIAPLVDGLDVASIGELKIALDAGISPKTISFAGPGKSDAELRTSLAAGII 129 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 E++ + A G + +A RVNP+ T G + FGI ++ + Sbjct: 130 INMESEG-EMERIAHLAEKQGYRPKVAVRVNPNFELKTSGMKMAGGPK-PFGIDAERVPA 187 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGG 239 + A S L G + GSQ + E+ +A + L + RS ++ +++GGG Sbjct: 188 MLARLSALDL-DFQGFHIFSGSQNLRAEAIIEAQERTFTLALELARSAPAPVRLLNIGGG 246 Query: 240 LGIAYHSDHRPPSSSDYASL-----IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GI Y +P A + ++ LE GR+LV + GI V +VI K Sbjct: 247 FGIPYFPGDKPLDLRPIADNLAASLPKVQQQLPEAEVTLELGRYLVGEAGIYVCEVIDRK 306 Query: 295 KSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 S F+I + ++ + + N A +VGP+C D Sbjct: 307 ISRGHVFLITNGGLHHHLAASGNFGQVIRKNYPVVVGNRVQGSDREIASVVGPLCTPLDI 366 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 +A +A GDL+ + ++GAYG S + E++V Sbjct: 367 LAHRMDLAQAEVGDLIVVFQSGAYGRSASPLGFLGHPAPAEVLV 410 >gi|220930615|ref|YP_002507524.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulolyticum H10] gi|220000943|gb|ACL77544.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulolyticum H10] Length = 415 Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 99/413 (23%), Positives = 191/413 (46%), Gaps = 10/413 (2%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 ++ + +AH +TP Y + +E+ Y Y++KAN + + + L Sbjct: 1 MDDRQIINIAHKYKTPLYLFDGDRLEETYFNMKKVLPDA-FEFFYSVKANPSYGICRILQ 59 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 SG+++ S GEL AL A ++I+F+G GKT E++ A+ S I N ES E+ Sbjct: 60 KCSSGIEVASAGELHLALEAGFDNKKILFTGPGKTYSELEFAVDSKILAINAESYKEIML 119 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKK-ISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 ++ A + K + R++P+ + IS +FG+ I +I + Y + + Sbjct: 120 IDDIAKAKNKIVDVGLRIHPNFKIESKNPAISMMGTGTQFGVDIDEIPEILKYIKSSKNL 179 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + ++ GSQI Q ++ F+ ++ ++ + N +I+ +D GGG G++Y ++P Sbjct: 180 NLVCFHVYAGSQIFQPDTTLAYFEQTINIFKELIEKNDLHIKVLDFGGGFGVSYDGKNKP 239 Query: 251 PSSSDYASLIHQYFGNLQCKI-----ILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + + I++ + + + E GR L+A+ G+ +T+V K DK F+I D Sbjct: 240 YDFEYFGAEINKLYHKYEDFFQGKKLVFESGRLLLAESGVFLTEVQYRKVLHDKVFLITD 299 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIALNRKIALPRPGD 364 MN T + N+++ +R + GP+C D + N + GD Sbjct: 300 GGMNHNSLSTFREKKIRGNFLMKILDNRNEEETVTVAGPLCTPEDILGRNVTLNKADRGD 359 Query: 365 LLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 +L I+ TGAYG+ S + E+++ + + ++ F+ ++ I Sbjct: 360 ILCIKNTGAYGSSFSPLGFLGHPAPCEVLIYKNNEYYLKKHGVFKNILNGQEI 412 >gi|254442821|ref|ZP_05056297.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Verrucomicrobiae bacterium DG1235] gi|198257129|gb|EDY81437.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Verrucomicrobiae bacterium DG1235] Length = 419 Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 87/422 (20%), Positives = 150/422 (35%), Gaps = 23/422 (5%) Query: 11 LHAENVSLEKLAHV----VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 + AEN +LA V TP Y YS + + + YA+KA+ N Sbjct: 1 MSAENFITRELAEQIHSKVGTPCYVYSEAELRASAKKVLAFPNAFGLTARYAMKASPNSN 60 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ A +G D S E+RRA+AA + +RI S D L S Sbjct: 61 ILRLFASMGMHFDASSGFEVRRAIAAGIEPKRISLSTQELPEDFASLVETGISVNVCSLS 120 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 + +R S + + R NP + + ++ + G FGI Q+ + Sbjct: 121 QL------KRFGSALPGSKVGLRFNPGLGSGGTQRTNVGGPASSFGIWHEQLDEVKKVVE 174 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 ++ + L +N + +G G Sbjct: 175 KYELDVFRIHSHIGSGSDPEVWIRVVSMNLALVEAFPSVTNLNLGGGYKIGRIEGEKTTD 234 Query: 247 DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA--DKTFVIL 304 + + +EPG +LVA+ ++++V + F+ L Sbjct: 235 LQVIGQKMKVEFEEFAARTGREIHLEVEPGTYLVANCTSILSRVQDETSTGDSGYDFLKL 294 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA---------LNR 355 D M D RP++Y A H + + +R +VG CE+GD + R Sbjct: 295 DTGMTDNTRPSMYGAQHPMWVLPADESERGEKEYIVVGHCCESGDILTPASGDPEGLAPR 354 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIEL 413 ++ + GD I GAY + + YNS E++V G + IIR R +++ Sbjct: 355 RLTEAKVGDFFVIGGAGAYCSSMAAKNYNSFPESAEVLVREGGRVAIIRERQPLEQIWVN 414 Query: 414 DS 415 + Sbjct: 415 EV 416 >gi|291441781|ref|ZP_06581171.1| decarboxylase [Streptomyces ghanaensis ATCC 14672] gi|291344676|gb|EFE71632.1| decarboxylase [Streptomyces ghanaensis ATCC 14672] Length = 542 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 89/431 (20%), Positives = 162/431 (37%), Gaps = 38/431 (8%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQ 65 G+L E +L LA +P + + +N F G V Y+ K N Sbjct: 118 GGALCLEGKALSSLADRWGSPLFVVHGARLAENVRRFQQVPRGRSLGVDVFYSYKTNPVP 177 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 AV++ L+ LG G ++VS EL AL V RI+++G GKT + ++S + ++ Sbjct: 178 AVLQRLSRLGVGAEVVSPYELWLALRLGVEPGRIIYNGPGKTPSVVRTLVRSDLLLTHLN 237 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYA 183 E+ + + A LGK+ + RV + + KFG+PI Q + Y Sbjct: 238 HREEIALVARVAAELGKRIDVGLRVATSDSWSG-----------KFGVPIAGGQALAAYE 286 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A P +++ G+ H G I+ ++ + + + + L + + GG Sbjct: 287 EALAHPSLRVVGLHAHRGVAIEDADTLERFVREVLEFCDALHARLGLDVRLLDLGGSLAV 346 Query: 244 YHSDHRPPSSSDYASLI--------------------HQYFGNLQCKIILEPGRFLVADV 283 S A + + G +++LEPGR L + Sbjct: 347 PTVLPLDASPLPLAERVGRRLSIERYLALLVEQVEDHFRRVGRPAPRVLLEPGRALTGNT 406 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 +L+ +V S+ + A + + + G+ + GP Sbjct: 407 QMLLCRVNSLNAPGSGPAHAILDAGENIAHILH--REYHEIFHAERWGESRSETYTLDGP 464 Query: 344 ICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 C D + + R GD L I GAY S ++ ++++ + +IR Sbjct: 465 TCSPMDCLRQTVALPPLRVGDTLAIMDAGAYLVSFSNSFC-FPQPGVVVLDQGRERLIRR 523 Query: 404 RMTFQELIELD 414 T++++I D Sbjct: 524 PETYEDMIARD 534 >gi|239933414|ref|ZP_04690367.1| decarboxylase, pyridoxal-dependent [Streptomyces ghanaensis ATCC 14672] Length = 554 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 89/431 (20%), Positives = 162/431 (37%), Gaps = 38/431 (8%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQ 65 G+L E +L LA +P + + +N F G V Y+ K N Sbjct: 130 GGALCLEGKALSSLADRWGSPLFVVHGARLAENVRRFQQVPRGRSLGVDVFYSYKTNPVP 189 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 AV++ L+ LG G ++VS EL AL V RI+++G GKT + ++S + ++ Sbjct: 190 AVLQRLSRLGVGAEVVSPYELWLALRLGVEPGRIIYNGPGKTPSVVRTLVRSDLLLTHLN 249 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI--HQIHSLYA 183 E+ + + A LGK+ + RV + + KFG+PI Q + Y Sbjct: 250 HREEIALVARVAAELGKRIDVGLRVATSDSWSG-----------KFGVPIAGGQALAAYE 298 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 A P +++ G+ H G I+ ++ + + + + L + + GG Sbjct: 299 EALAHPSLRVVGLHAHRGVAIEDADTLERFVREVLEFCDALHARLGLDVRLLDLGGSLAV 358 Query: 244 YHSDHRPPSSSDYASLI--------------------HQYFGNLQCKIILEPGRFLVADV 283 S A + + G +++LEPGR L + Sbjct: 359 PTVLPLDASPLPLAERVGRRLSIERYLALLVEQVEDHFRRVGRPAPRVLLEPGRALTGNT 418 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 +L+ +V S+ + A + + + G+ + GP Sbjct: 419 QMLLCRVNSLNAPGSGPAHAILDAGENIAHILH--REYHEIFHAERWGESRSETYTLDGP 476 Query: 344 ICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 C D + + R GD L I GAY S ++ ++++ + +IR Sbjct: 477 TCSPMDCLRQTVALPPLRVGDTLAIMDAGAYLVSFSNSFC-FPQPGVVVLDQGRERLIRR 535 Query: 404 RMTFQELIELD 414 T++++I D Sbjct: 536 PETYEDMIARD 546 >gi|251787749|ref|YP_003002470.1| Orn/DAP/Arg decarboxylase 2 [Dickeya zeae Ech1591] gi|247536370|gb|ACT04991.1| Orn/DAP/Arg decarboxylase 2 [Dickeya zeae Ech1591] Length = 440 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 118/414 (28%), Positives = 194/414 (46%), Gaps = 12/414 (2%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 + E VS+ +A + TPFY YST + + DT V Y+LKAN N +V+KTL Sbjct: 19 YIEEVSITDIADRIGTPFYVYSTRQLRRQLQQLYQQLP-ADTAVYYSLKANPNLSVVKTL 77 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G+G ++ S EL ALAA V + I++ G GK++ + A+ GI VES +EL+ Sbjct: 78 VEQGAGCEVCSPAELDTALAAGVLPQHILYVGPGKSVPALARAIDCGIRAIVVESVAELE 137 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 T+N+ A G +A R+NPD ++ H ++ K +FG+ + + ++ P V Sbjct: 138 TINRLAAQAGTIQTVALRINPDFSS-EHARLVMSGKPTQFGMTLDTLQTVLPCLHRWPAV 196 Query: 192 KISGVDMHIGSQIDQIESFH-KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + G +++G++I ++ +L+ + + IDVGGG G+ Y P Sbjct: 197 ALRGFHVYLGTRILNAQAIADNTRNILQMALNLRDQHQLALDFIDVGGGFGVPYFPKETP 256 Query: 251 PSSSDYASLIHQYFGNLQC-----KIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + + + +II+E GR+LVA+ G+ VT+V ++K + KTF I D Sbjct: 257 LDLPSLGEAMAPVMADFRRQAATTQIIIELGRYLVAEAGLFVTRVNNLKTAGGKTFAICD 316 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGD---RLHIHADIVGPICETGDFIALNRKIALPRP 362 N ++ N+ + GD R + GP+C D + N + + Sbjct: 317 GGANCHSAAAGLNSMLRKNFPLLRVGDNQSRPLQPYQVSGPLCTPTDLLGDNVLLPMLEV 376 Query: 363 GDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 DL+ I +GAYG S + S E MV+G + IR T + + Sbjct: 377 NDLIGITHSGAYGLTASPGAFLSFGYPAEAMVDGRRLIQIRQPETTAQWLARQQ 430 >gi|159036153|ref|YP_001535406.1| Orn/DAP/Arg decarboxylase 2 [Salinispora arenicola CNS-205] gi|157914988|gb|ABV96415.1| Orn/DAP/Arg decarboxylase 2 [Salinispora arenicola CNS-205] Length = 417 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 104/406 (25%), Positives = 173/406 (42%), Gaps = 14/406 (3%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA TP + Y + Y + Y+LKAN N A+ L LG+G + Sbjct: 6 ALAEEYGTPLFVYEADTVAAQYTGLRQRL-HPAMDIFYSLKANPNLALCGHLRSLGAGAE 64 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 + S EL A A VP IVF G GK+ +EI L + IY ES EL+ +N A Sbjct: 65 VSSLLELTTAREAGVPPGDIVFPGPGKSREEITACLDAQIYAIICESFEELELVNDLARE 124 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 G +A +A RVNP K +FGI + L +++ GV ++ Sbjct: 125 RGVRARVALRVNPAFAVKGSGLTMG-GKPRQFGIDEAHL--FALPGLRLAHLRVVGVHVY 181 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 +G++I + + + +L ++ ++ +DVGGGLG+AY R + Sbjct: 182 LGTRILDETVIAENTRRILELAERLAAHLDFPLEFVDVGGGLGVAYFDGERDLAVERLTD 241 Query: 259 LIH-----QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 L++ + + ++I+E GR+LVA G + +V +K S + F + D + M Sbjct: 242 LVNPVVADFHDRHRDTRLIMELGRYLVAPAGTYLIRVRYVKSSMGERFAVTDGGTHQHMA 301 Query: 314 ---PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + ++ D + + GP+C D + ++ R GDLL + + Sbjct: 302 AVGIGSFVKRDFPLRLLGRPTDGPLVRWTVTGPLCTPNDTLVRAAELPDLRRGDLLGVLR 361 Query: 371 TGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 +GAYG S T + E++V ++R R +L+ Sbjct: 362 SGAYGPSASPTLFLGHGHPAEVLVRNGVGCLVRHRDQVADLLRQQR 407 >gi|254433551|ref|ZP_05047059.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus oceani AFC27] gi|207089884|gb|EDZ67155.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosococcus oceani AFC27] Length = 401 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 108/405 (26%), Positives = 173/405 (42%), Gaps = 16/405 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F L V L + A V TPFY Y I + + + YAL Sbjct: 1 MDYFPIKNDCLLVGGVPLTEFAARVGSTPFYAYERRLISERIQHLRTHLP-SEIYIHYAL 59 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN A+ +A L GLD+ S GELR AL P E I F+G GK+ E+ +L +GI Sbjct: 60 KANPMPALAGHIAPLVDGLDVASLGELRVALDTGTPPESISFAGPGKSDAELAASLAAGI 119 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 E++ + A G++ +A RVNP+ T G + FG+ ++ Sbjct: 120 TINMESEG-EMERIAHLAEKQGRRPRVAVRVNPNFELKTSGMKMAGGPK-PFGVDAERVP 177 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGG 238 ++ A +TL G + GSQ + E+ +A + L +L + + +++GG Sbjct: 178 AMLARINTLDL-DFQGFHIFSGSQNLRAEAIIEAQERTFTLALELARSAPTPVRLLNIGG 236 Query: 239 GLGIAYHSDHRPPSSSDYASL-----IHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 G GI Y ++P A + ++ LE GR+LV + GI V ++I Sbjct: 237 GFGIPYFPGNKPLDLRPIADNLAASLPKLQRQIPEAEVTLELGRYLVGEAGIYVCEIIDR 296 Query: 294 KKSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S F+I + ++ + + N A +VGP+C D Sbjct: 297 KISRGHVFLITNGGLHHHLAASGNFGQVIRKNYPVVVGNRIQGSTREIASVVGPLCTPLD 356 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 +A ++A GDL+ + ++GAYG S + S + E++V Sbjct: 357 LLADRMELAQAEAGDLIVVFQSGAYGRSASPLGFLSHPVPAEVLV 401 >gi|114331378|ref|YP_747600.1| ornithine decarboxylase [Nitrosomonas eutropha C91] gi|114308392|gb|ABI59635.1| ornithine decarboxylase [Nitrosomonas eutropha C91] Length = 390 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 82/367 (22%), Positives = 138/367 (37%), Gaps = 18/367 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF T I F A YA KAN + V+KTL G G +I S EL Sbjct: 41 PFLMVDTAIIRNKARRFKAAMPR--VHPHYAAKANPDPRVLKTLIEEGVGFEIASIAELD 98 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + VPA I +S K+ + A G+ + ++S EL+ + I Sbjct: 99 LLMGFGVPAAEIFYSNPMKSRAYLQYAAAKGVEWYVLDSVEELRKI----------VSIK 148 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + +T S KFG + + + A L ++GV H+GSQ Sbjct: 149 ADAKLYLRIDTPNIGSDWPLAGKFGTHLGDVREIIDEAVKL-NADLAGVTFHVGSQCRNP 207 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +++ + + + +R G N + +++GGG + Y Sbjct: 208 QNWRVGIERAKTVFASMREAGLNPRLLNLGGGYPVRYVKPIPSIEIIAEVINEAIADLPQ 267 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 +I+ EPGR+LV+D V +V+ K ++ D + + +EI Sbjct: 268 NIRIMAEPGRYLVSDSACFVCRVVGTATRNGKRWMYWDAGIFGGIIEVSEGLRYEILTQR 327 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRL 386 N + + GP C++ D + + + R D ++I GAY + +N Sbjct: 328 N----GSLVPWSVAGPTCDSVDVLMHDEMLPEDVREDDFIFIPNAGAYTTSYASNFNGFP 383 Query: 387 LIPEIMV 393 L I+V Sbjct: 384 LPDVIVV 390 >gi|183220822|ref|YP_001838818.1| diaminopimelate decarboxylase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910921|ref|YP_001962476.1| diaminopimelate decarboxylase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775597|gb|ABZ93898.1| Diaminopimelate decarboxylase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779244|gb|ABZ97542.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 422 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 98/420 (23%), Positives = 165/420 (39%), Gaps = 36/420 (8%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYL---TFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + LA TP + YS IE+ F NAF V YA+KAN N +++ + Sbjct: 15 VRTLAKEFGTPLFVYSEKEIEQKCDDTLAFPNAF---GLQVRYAMKANPNSNILQIMKKK 71 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G +D SE E+ RAL E I+ + ++L + + + EL Sbjct: 72 GILIDASSEHEVVRALHFGFSPESIMLTSQEFPKAFVELIGKGVKFNACSLRQLEL---- 127 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 ++ R NP + + KK G FGI ++ + A + V + Sbjct: 128 --FGQHFPGKSVSIRFNPGLGSGHTKKTDVGGVTSSFGIWHEKLEEVKAIVNKYNLV-VE 184 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 V HIGS S + +K + T + + ++ + +GGG + D + + Sbjct: 185 KVHTHIGSG-----SDPEVWKAVAKYTLEYAESFPSVTVVSLGGGYKVGRMEDEKSTNLQ 239 Query: 255 DYASLIHQYF------GNLQCKIILEPGRFLVADVGILVTKVISIKKSA--DKTFVILDV 306 + + F + + +EPG +L+A G L+T V + F+ LD Sbjct: 240 TIGAPVKIQFEEFAKKHGRKLILEIEPGTYLIALCGALLTTVDDKVDTGKHGFQFLKLDT 299 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAG-DRLHIHADIVGPICETGDFIALN-------RKIA 358 M+ RP+LY A H + + G H +VG CE+GD R + Sbjct: 300 GMDSNTRPSLYGARHPLITVKKDGGIPSSHKEYVVVGHCCESGDVFTQKEGGEPITRLMG 359 Query: 359 LPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDSI 416 GD + +E GAY + S YNS E+++ + +IR + E+ + + Sbjct: 360 EAEIGDYVVMEAIGAYCSSMSTKNYNSFPETAEVLLRKNGETKLIRKKEPVMEIFRNEIL 419 >gi|114331408|ref|YP_747630.1| Orn/DAP/Arg decarboxylase 2 [Nitrosomonas eutropha C91] gi|114308422|gb|ABI59665.1| Orn/DAP/Arg decarboxylase 2 [Nitrosomonas eutropha C91] Length = 411 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 116/404 (28%), Positives = 185/404 (45%), Gaps = 16/404 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F + L + L +LA + TPFY Y I + D ++ YA+ Sbjct: 11 MIQFPVQDHCLVIGGIPLTRLAQRIGSTPFYAYDRQLISTRVQSLRQHLP-PDILLHYAM 69 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN AV++ LA L G+D+ S GE++ AL A V E I F+G GK E+ A+ + Sbjct: 70 KANPMPAVVQHLAGLVDGIDVASVGEMKVALDAGVTPENISFAGPGKNRQELACAIAA-G 128 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N+ESE EL+T+ Q A G +A RVNPD + G +FGI +I Sbjct: 129 IIINMESEQELETIAQLADETGFHPKVAVRVNPDFELKSSGMRMGGG-SKQFGIDAERIP 187 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGG 238 ++ + L G+ + GSQ ++E+ +A + L QL S I+ I++GG Sbjct: 188 AVLQRIAQLKL-DFEGLHIFSGSQNLRVEAIQEAHEKTLQLGLQLASTSPVPIRTINIGG 246 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQY-----FGNLQCKIILEPGRFLVADVGILVTKVISI 293 G G+ Y P S + + Q + + ++E GR++VA+ GI V +V+ Sbjct: 247 GFGVPYFPGENPLDLSAVGTNLKQLLAEIPASSPNIRFVVELGRYIVAEAGIYVCRVLEK 306 Query: 294 KKSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S + F+I + ++ + + N A +VGP+C D Sbjct: 307 KLSRGQVFLITNGGLHHHLAASGNFGQVIRKNYPVAVGNKMYISETETASVVGPLCTPLD 366 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIM 392 +A +++ PGDL+ + ++GAYG S T + S EI+ Sbjct: 367 LLANQMELSKAEPGDLIVVFQSGAYGLTASPTSFLSHPAPLEIL 410 >gi|257093227|ref|YP_003166868.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045751|gb|ACV34939.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 401 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 105/405 (25%), Positives = 174/405 (42%), Gaps = 16/405 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS F +G L + L +LA V TPFY Y + + A + YA+ Sbjct: 1 MSQFPVKDGELLVGGIPLSRLAARVGQTPFYAYDRQLLTRRVALLRAALPAS-LKLHYAM 59 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN A++ +A L G+D+ S GEL+ AL A I F+G GK E+ A+ +GI Sbjct: 60 KANPMPALVCHMAGLVDGIDVASAGELKVALDAGANPREISFAGPGKRRAELSQAVAAGI 119 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N+ES E+ L + G +A RVNPD + G +FG+ Q+ Sbjct: 120 L-INIESFREVAELAAISHETGCAGRVAVRVNPDFELKSSGMKMGGGA-RQFGVDAEQVP 177 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGG 238 L G + GSQ + E+ +A +L +L + ++ +++GG Sbjct: 178 DLLTEIGRYGLA-FEGFHLFAGSQNLRPEAIAEAQIKSFELALRLAGSAPAPVRFLNLGG 236 Query: 239 GLGIAYHSDHRPPSSSDYASL-----IHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 G GI Y + + + ++++E GR+LV + G+ VT+++ Sbjct: 237 GFGIPYFPGEQHLELAPIGANLSGIVERAARELPAAELVIELGRYLVGEAGLYVTRILDR 296 Query: 294 KKSADKTFVILDVAMNDFMR----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S +TF++ D ++ + + I N +VGP+C D Sbjct: 297 KTSRGQTFLVTDGGLHHHLSASGNFGQVIRKNYPVAIGNRMIPARLETVSVVGPLCTPLD 356 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 +A ++A + GDL+ + ++GAYG S + EI+V Sbjct: 357 LLAERMELAEAQAGDLVVVHQSGAYGMTASPQAFLGHPACVEILV 401 >gi|303239984|ref|ZP_07326506.1| Orn/DAP/Arg decarboxylase 2 [Acetivibrio cellulolyticus CD2] gi|302592463|gb|EFL62189.1| Orn/DAP/Arg decarboxylase 2 [Acetivibrio cellulolyticus CD2] Length = 412 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 104/410 (25%), Positives = 179/410 (43%), Gaps = 10/410 (2%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 + L+ +A TP Y Y IEK Y T + + + Y+ KAN + + + Sbjct: 1 MNDCLLKDVARQFGTPSYMYDGDCIEKQYNTLRSFLPE-NFQIFYSAKANPLLGICQIMK 59 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 ++GSG+++ S GEL A A E+I+F+ GKT E+ A++S IYC N+E E Sbjct: 60 NMGSGIEVASVGELYLAQKAGFTPEQIIFTSPGKTAQELIYAVESNIYCINIECTEEAVL 119 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 LNQ A K IA RVNPD N + +G +FGI ++ + + TL +K Sbjct: 120 LNQIAEERSKIVNIAVRVNPDFNLQGSRIKMSGVSS-QFGIDQGEVKNAFETLKTLANIK 178 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + G+ ++ G+Q+ +S + F+ L L GG + + P Sbjct: 179 LIGIHVYCGTQVLSSQSLLECFEEEIKLALALSDEFDFSLEFLDLGGGFGIPYFKNEYPL 238 Query: 253 SSDYASL------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 + + ++ +E GRFL+A+ G+ +TKV+ +KK F++ D Sbjct: 239 DIVLLKDGMSKLIRNYGTRLEKTRVAVESGRFLLAECGLYLTKVLYVKKCKGSKFIVCDG 298 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLH-IHADIVGPICETGDFIALNRKIALPRPGDL 365 N + N+ + + +VGP+C D I + D+ Sbjct: 299 GSNHHASSAFLGRHVRNNFPMRVLEKSENCEEVTVVGPLCTPTDVIGQKVLLPTIETEDI 358 Query: 366 LYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + IEK+GAYG S + S + E++ + ++ R R ++ ++ Sbjct: 359 IAIEKSGAYGLTHSPVMFLSHEMPIELVSYKGEINVARERGRKEDFLKNQ 408 >gi|300785523|ref|YP_003765814.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] gi|299795037|gb|ADJ45412.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] Length = 427 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 95/421 (22%), Positives = 174/421 (41%), Gaps = 15/421 (3%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + + +LA TP Y Y A + + Y+ KAN N +V L L Sbjct: 6 DHDVAELADRFGTPLYLYDGDA-LRERYERLRERLHPGVDIFYSAKANPNVSVCALLHSL 64 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+GL+I S EL A A ++F G GK+ +E+ + G+ ES +EL ++ Sbjct: 65 GAGLEISSLAELVTAERAGATGPDVIFLGPGKSTEELRACCERGVGTIVCESFAELAAVD 124 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + K + + + +++ G K +FG+ + S S L ++++ Sbjct: 125 ELRPPATVKVMLRVNPE---SESAGSRLAMGGKPRQFGVDEEILRSSRDAVSALRHIRVT 181 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G ++G++I + + + +L + ++ +D+GGG G+ Y + Sbjct: 182 GFHAYLGTRILDATTIVRNTGTILELAESLAELLDIPLETVDIGGGWGVPYFDGEDDLDA 241 Query: 254 SDY-----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 A++ N ++I E GR+LV G + + +K+S + FVI D Sbjct: 242 DAAIEGINAAVESFLDRNPATRVITELGRYLVGWAGRYIVRARYVKESKGEWFVIADGGT 301 Query: 309 NDFMR---PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 N M + + + + GP+C D +A + PGDL Sbjct: 302 NHHMAAVGIGSFVKRNFPIRALAGQDSPADRVYTVTGPLCTPNDVVAKRVWLPEVHPGDL 361 Query: 366 LYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI-PAWLQKT 423 L + ++GAYG S + S E+++ G H++R R T ++L+ + PA L+ Sbjct: 362 LEVARSGAYGPSASPVMFLSHGHPAEVLLLGGTAHLVRSRDTVEDLLRPQHLVPAELRAP 421 Query: 424 P 424 Sbjct: 422 A 422 >gi|116329346|ref|YP_799066.1| diaminopimelate decarboxylase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330051|ref|YP_799769.1| diaminopimelate decarboxylase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122090|gb|ABJ80133.1| Diaminopimelate decarboxylase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123740|gb|ABJ75011.1| Diaminopimelate decarboxylase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 422 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 92/412 (22%), Positives = 160/412 (38%), Gaps = 22/412 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + +A TP + YS IEK+ +G V YA+KANSN+ +++ + G Sbjct: 15 VRSIAQQFGTPIFVYSREGIEKSCDAALAFPNGYGLTVRYAMKANSNRTILEIIKRKGIQ 74 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D SE E+ RA+ E I+ + + + + ++ + E Sbjct: 75 IDASSEYEVLRAIHYGFKPEEIMLTSQELAKNLKEFVEKGVVFNACSLRQLEA------F 128 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 +L ++ R NP + + KK G K FG+ +++ + AS +KI + Sbjct: 129 GNLFPGKEVSVRFNPGLGSGQTKKTDVGGKTSSFGVWHEELNKVKEIASKYK-LKIFKIH 187 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 HIGS E++ ++ D+ Q G + + Sbjct: 188 THIGSGS-DPEAWKAIAQVSLDIAAQFSECKILNLGGGFKVGRMEDEKTTNFQKIGKPVV 246 Query: 258 SLIHQYFGNLQCKIIL--EPGRFLVADVGILVTKVIS--IKKSADKTFVILDVAMNDFMR 313 L ++ + L EPG FL+ + G +++ V TFV +D M+ R Sbjct: 247 ELFQEFAKKHGTSLHLEIEPGSFLMVNNGSIISTVDDVVSTGDGGYTFVKIDAGMDVNTR 306 Query: 314 PTLYDAYHEINYIVNPA-GDRLHIHADIVGPICETGDFIALN-------RKIALPRPGDL 365 P+LY A H + + VG CE+GD R + GD Sbjct: 307 PSLYAARHPLVVVPKVETHSGKTASYVYVGHCCESGDLFTQAEGGGPVTRITGEAQLGDY 366 Query: 366 LYIEKTGAYGAVQSG-TYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDS 415 + +E GAY + S YNS E++V+ F +IR R +++ + + Sbjct: 367 VVMEGAGAYCSSMSTKNYNSFPETAEVLVDLDGSFQLIRKRQNLEQIFQNEV 418 >gi|311899938|dbj|BAJ32346.1| putative diaminopimelate decarboxylase [Kitasatospora setae KM-6054] Length = 420 Score = 183 bits (463), Expect = 7e-44, Method: Composition-based stats. Identities = 109/408 (26%), Positives = 183/408 (44%), Gaps = 12/408 (2%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 + + + +LA TP Y Y A+ YL + + + Y+LKAN N +V L Sbjct: 1 MQGLPVSELAQRFGTPLYLYDGDAVRDQYLGLRDRLHPV-VEIFYSLKANPNISVCALLH 59 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 LG+ ++ S EL AL A VPA++I+F G GK+ EI L+ I ES EL Sbjct: 60 RLGARAEVSSMAELVTALEAGVPADQIMFLGPGKSEQEITACLKEDIRAIICESIDELAA 119 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 +++ A LG +A + RVNP K +FGI + Sbjct: 120 IDRLAADLGTRARVVLRVNPSFTVKGSGLTMG-GKPRQFGIDEQALFDAEDLPGRHARTD 178 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + GV ++G++I E+ + + + D+ ++ G + +DVGGGLG+AY + + Sbjct: 179 LIGVQAYMGTRILSEEAVAENTRRILDMAERLAERQGFPLDLVDVGGGLGVAYFAQEQDL 238 Query: 252 SSSDYAS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 A + ++++E GR+LVA G+ V+ V +K+S + F I D Sbjct: 239 DVDRLADLVNPIFEEFHRRRPDTRVVMELGRYLVATGGVYVSAVRYVKESMGERFAITDG 298 Query: 307 AMNDFMRPTLYDAYHEINYIVN--PAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPG 363 N M ++ + N+ + ++ GP+C D + ++A RPG Sbjct: 299 GTNHHMAAVGIGSFAKRNFPMRLLNRAGGPAAKWNVTGPLCTPNDTLGKGVELADDLRPG 358 Query: 364 DLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 DL+ +E++GAYG S + S E++V ++R R + L Sbjct: 359 DLIGVERSGAYGPTASPVLFLSHGYPAEVLVVDGDAQLVRRRDETEHL 406 >gi|237718347|ref|ZP_04548828.1| diaminopimelate decarboxylase [Bacteroides sp. 2_2_4] gi|229452280|gb|EEO58071.1| diaminopimelate decarboxylase [Bacteroides sp. 2_2_4] Length = 365 Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats. Identities = 124/349 (35%), Positives = 181/349 (51%), Gaps = 7/349 (2%) Query: 23 HVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 +QTPFY Y T + + V YA+KAN+N V+ + G G D V Sbjct: 11 RTLQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCV 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE+R A+ A PA ++VF+GVGK EI+L L+ GI+CFNVES EL+ +N+ A + Sbjct: 71 SGGEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQN 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K A +AFR+NPD+ A+TH I+TG E+KFGI + + + A + VK G+ HIG Sbjct: 131 KVANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIG 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSSDYAS 258 SQI + F + +L +L + ++HI+VGGG + P +A+ Sbjct: 191 SQILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFAT 250 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + E GR +V G L++KV+ +K+ K F ILD M D +RP LY Sbjct: 251 YAGQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQ 310 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 A+H + N + D+VGPICE+ D + + GDL+ Sbjct: 311 AFH---KMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIA 356 >gi|295694996|ref|YP_003588234.1| Orn/DAP/Arg decarboxylase 2 [Bacillus tusciae DSM 2912] gi|295410598|gb|ADG05090.1| Orn/DAP/Arg decarboxylase 2 [Bacillus tusciae DSM 2912] Length = 477 Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats. Identities = 110/455 (24%), Positives = 194/455 (42%), Gaps = 33/455 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALK 60 G L ++V LE LA TP Y YS + + +N +AF + + + + L+ Sbjct: 19 NMLIRNGRLTMDDVDLEALADRFGTPLYVYSESHLWRNVRQLHDAFHYEHVPADLFFPLR 78 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A+SN A+++ + G G+++ S GEL++AL A ERI+ +G + + + AL+ G+ Sbjct: 79 ASSNLAILQAIGRTGIGVEVGSMGELKKALTAGFSGERILLAGADRPPELLSHALERGVR 138 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 + +S SE++TL+ + + A I V+P ++ K GI H + S Sbjct: 139 AISTDSLSEIETLSTLGTRMARPADILLEVDPVLSF--PNHRPPTPYYLKSGIDRHDLLS 196 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 PG++I G+ + +G+ + E+ + ++ +L +Q+RS + GG Sbjct: 197 FAEQTLNYPGIRIRGLHVQVGTYRWKPETLRRVGEIALELLEQIRSRLGVDGDVLFLGGE 256 Query: 241 GIAYHSDHRPPSSSDYASLIHQ------------YFGNLQCKIILEPGRFLVADVGILVT 288 + PSS + A+ + Q + + +L PG L+A+ G+L+T Sbjct: 257 LPLQVQELDLPSSDEAAAELDQDLLAARTLAELLTQYDRPLRFVLSPGERLIANAGLLLT 316 Query: 289 KVI-----SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI--- 340 V SI+ I+ + D L E + + R D+ Sbjct: 317 TVRQVKSKSIRDEEGNITDIVRWLIVDAGLNILPQWPGEPSNRAALSVTRAEQTHDVPFK 376 Query: 341 -VGPICETGDFI------ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 GP+ + D+ + + RPGD L TGAY NS M Sbjct: 377 IGGPLYDHRDYFRDGAQGSEYYLLPGNTRPGDRLAFLDTGAYVLEYMSEANSFPRAGAAM 436 Query: 393 VN-GSQFHIIRPRMTFQELIELDSIPAWLQKTPKQ 426 + Q H+IR TF++L++ D P +K P+ Sbjct: 437 IRTSGQVHLIRHHDTFRQLVDCDVFPGKYRKEPRP 471 >gi|217969813|ref|YP_002355047.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Thauera sp. MZ1T] gi|217507140|gb|ACK54151.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Thauera sp. MZ1T] Length = 415 Score = 182 bits (462), Expect = 9e-44, Method: Composition-based stats. Identities = 112/402 (27%), Positives = 181/402 (45%), Gaps = 17/402 (4%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F +G L L +LA V TPFY Y AI + A + YA+KAN Sbjct: 17 FAIADGELQIAGQPLSRLAARVGRTPFYAYDRGAIARRVAELRAALPPA-IELHYAMKAN 75 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 A++ LA L G+D+ S GEL+ AL A + + F+G GK E+ A+ +GI Sbjct: 76 PMPALVGHLARLVDGIDVASAGELQVALDAGADPQHVSFAGPGKRDTELRQAVAAGIL-V 134 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES E+ L + A +LG A +A RVNPD + G + FG+ Q+ L Sbjct: 135 NVESFREIAPLAEAAAALGVPARVAVRVNPDFELKSSGMKMGGGPK-PFGVDAEQVPGLL 193 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLG 241 A S G + GSQ + E+ +A + +L +L ++ ++ +++GGG G Sbjct: 194 AEISRAGLA-FEGFHLFAGSQNLKAEAIVEAQRKSFELALRLAAHAPAPVRTLNLGGGFG 252 Query: 242 IAYHSDHRPPSSSDYA-----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 I Y + + A + + +I+LE GR+LV + G+ V ++ IK S Sbjct: 253 IPYFPGEQALDLTPIAAGLADIVAEAAQALPEARIVLELGRYLVGEAGVYVCRITDIKVS 312 Query: 297 ADKTFVILDVAMNDFMR-----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 T+++ D ++ + + + + A +VGP+C D I Sbjct: 313 RGHTYLVTDGGLHHHLSASGNFGQVIRKNYPVAIGNRMDAPPAGEPASVVGPLCTPLDVI 372 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIM 392 A + + GDL+ + ++GAYGA S + + EI+ Sbjct: 373 ADRMPLPAAQIGDLIVVFQSGAYGASASPQAFLGHPQVVEIL 414 >gi|319786420|ref|YP_004145895.1| aspartate kinase [Pseudoxanthomonas suwonensis 11-1] gi|317464932|gb|ADV26664.1| aspartate kinase [Pseudoxanthomonas suwonensis 11-1] Length = 874 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 105/386 (27%), Positives = 176/386 (45%), Gaps = 18/386 (4%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 E L +LA TP Y Y + + +D YA+KAN + A++ LA Sbjct: 500 ERPRLLQLAQT-GTPRYVYHLPTVRERARQLKE-LAAVDRR-YYAIKANPHPAILNALAE 556 Query: 74 LGSGLDIVSEGELRRALAAPV--PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G GL+ VS E+R A R++F+ +E + AL G+ E Sbjct: 557 EGFGLECVSLAEIRHVFAVVPGIDPARVLFTPSFAPREEYEQALALGVTVTVDNVE---- 612 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 L + + + R++ H+K++TG KE KFG+ ++ A L V Sbjct: 613 -LLRNWPETFRGRSLWLRIDLGHGDGHHEKVNTGGKEAKFGLSAQRVDEFVQEARGLGVV 671 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 I+G+ H+GS ++ + + + L ++ + + +D+GGGL I Y + P Sbjct: 672 -ITGLHAHLGSGVENMGHWRQMCDELAGFARRFGT----VATLDIGGGLPIPYAPEDEPF 726 Query: 252 SSSDYASLIHQYFGNLQ-CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 +A+ + + +++EPGRFLVA+ G+L+ + + + V LD MN Sbjct: 727 DLEAWAASLAEVRAVHPAFGLVIEPGRFLVAEAGVLLARATQVVEKDGVVRVGLDAGMNA 786 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIE 369 +RP +YDA+H+I + D+VGPICE+ D R++ GD++ + Sbjct: 787 LVRPAMYDAWHDIVNLQRIDAPADGQ-FDVVGPICESSDLFGKRRRLPRDTAAGDVMLVA 845 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNG 395 GAYG + YN R L PE +++G Sbjct: 846 DAGAYGHSMASRYNLRELPPEDVIDG 871 >gi|312143556|ref|YP_003995002.1| Orn/DAP/Arg decarboxylase 2 [Halanaerobium sp. 'sapolanicus'] gi|311904207|gb|ADQ14648.1| Orn/DAP/Arg decarboxylase 2 [Halanaerobium sp. 'sapolanicus'] Length = 410 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 84/393 (21%), Positives = 149/393 (37%), Gaps = 15/393 (3%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 TPF+ Y I + ++F+ D +A+KAN N ++K + + G+D + Sbjct: 17 EHGTPFHIYDERIIIERLNNLIDSFNWTDFKEYFAIKANPNPHILKIMKEMNCGVDAATV 76 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E++ A I+F+ T+D A+ G + + + Sbjct: 77 SEIKLAEKVGFSGTDIMFTSNLTTLDAYQYAVDRGAIINIDWAADIYELFENDIIPENIS 136 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + +I K+ KFG QI ++ S K+ G+ + S Sbjct: 137 FRLNPGSIE-------NEIMGDSKDSKFGSTAEQIKEAVSFLSKNGIKKL-GLHTMVVSN 188 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + F +++ D +L + GG + + A ++Q Sbjct: 189 ENDPAIFKDYTEMIFDFALELINEFGVEIEFINIGGGIGIPYLPEQNVDLKAIADSVYQS 248 Query: 264 FGNLQ------CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + N+ KI LE GR++ + G LVTK+I K++ K + + Sbjct: 249 YKNIILAEDLKPKIFLESGRYVTGESGYLVTKIIKEKETFKKYLGLDASMSDLMRPGMYG 308 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 +H N G++ D+VG +CE D A+NRK+ L + D++ I TGA+G Sbjct: 309 SYHHITNIDAEERGEKETEIYDVVGSLCENNDKFAVNRKLPLSKKNDIIVIHDTGAHGHA 368 Query: 378 QSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQE 409 YN L E + + IR TF++ Sbjct: 369 MGFNYNGMLKNSEFLYTRDGKVRQIRRNETFED 401 >gi|329895688|ref|ZP_08271111.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC3088] gi|328922206|gb|EGG29560.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC3088] Length = 315 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 119/299 (39%), Positives = 179/299 (59%), Gaps = 3/299 (1%) Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 GI+CFNVES +EL+ L + A LGK+AP++ RVNPD++A TH ISTG E+KFGI + Sbjct: 19 GIHCFNVESVAELELLAEVAQELGKEAPVSLRVNPDVDAKTHPYISTGLAENKFGISMEH 78 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + YA+ G+++ G+D HIGSQ+ ++ F A + DL +LR G ++H+D G Sbjct: 79 AYQAYAFVHATEGLRVIGIDCHIGSQLTELAPFKDALDRVLDLVDRLREAGIVLEHVDAG 138 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GGLG+ Y + P +DY + ++LEPGR +VA+ G L+T+V +K + Sbjct: 139 GGLGVRYKDETP-PDITDYVRALKGPLAARGLGLMLEPGRSIVANAGTLITQVDFLKTTE 197 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 F ++D AMND +RP LY A+ + + D +IVGP+CETGDF+ +R++ Sbjct: 198 KHNFALVDAAMNDLLRPALYQAWMD-IKPLEVNSDVTEKAWNIVGPVCETGDFLGKDRRL 256 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 A GD L + GAYG V + YN+R EIM++G Q H++R R T +L + + + Sbjct: 257 A-LSAGDRLAVLGAGAYGFVMASNYNTRPRAAEIMIDGDQMHLVRERETVADLFKHEHL 314 >gi|300312040|ref|YP_003776132.1| diaminopimelate decarboxylase [Herbaspirillum seropedicae SmR1] gi|300074825|gb|ADJ64224.1| diaminopimelate decarboxylase protein [Herbaspirillum seropedicae SmR1] Length = 418 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 99/407 (24%), Positives = 180/407 (44%), Gaps = 20/407 (4%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 AF +G LH + L++LA V TPFY Y + + + Y++KA Sbjct: 16 AFPIVDGMLHVGGMPLDRLALRVGATPFYVYDRALLRARVAHLRAHLP-AELALHYSIKA 74 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N A+++ +A L G D+ S GEL AL P+P + I F+G GK++ E+ AL +G+ Sbjct: 75 NPMPALVQAMAQLVDGFDVASGGELATALDTPMPVQHISFTGPGKSLAELRRALAAGVML 134 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 E + + A LG + + R+NP + G + FG+ +L Sbjct: 135 HVESER-EAEAVAALAQELGVRPGVTLRINPPFELKSSGMRMGGGAK-PFGVDAEAAPAL 192 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGL 240 + + +++G+ + GSQ ++ A +L QL +++ +++GGG Sbjct: 193 LRWLAGQGV-QVAGLQIFCGSQSLDAQAIMAAQSSSFELALQLAGEAGLSLRVLNIGGGF 251 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFG-----NLQCKIILEPGRFLVADVGILVTKVISIKK 295 GI Y R + + + Q+ + Q ++++E GR+LV + G+ V++VI K+ Sbjct: 252 GIPYFPGERALEIAPIGAHLAQWLPRLRALHPQLRVVMEMGRYLVGEAGLYVSRVIDRKQ 311 Query: 296 SADKTFVILDVAMNDF--------MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 S + F+++D ++ + +G +VGP+C Sbjct: 312 SRGEVFLVVDGGLHHHLAASGNFGQVIRKNYPVTIVPQQPQRSGGGTTERVSVVGPLCTP 371 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 D +A + GDL+ + ++GAYG S T + E++V Sbjct: 372 LDVLAAQMLLPAAAVGDLVVVFQSGAYGLSASPTAFLGHPAPAEVLV 418 >gi|23004296|ref|ZP_00047701.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 276 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 135/274 (49%), Positives = 186/274 (67%), Gaps = 1/274 (0%) Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNPD++A TH KISTGK E+KFGIPI + +YA A+ LPG++I GVD HIGSQI + Sbjct: 2 IRVNPDVDALTHAKISTGKSENKFGIPIARAREVYAGAARLPGLEIVGVDAHIGSQITDL 61 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI-HQYFGN 266 F A +LL L + L ++GH + H+D GGGLGI Y D+ PP + I +F Sbjct: 62 TPFDNAARLLCALARDLLADGHRLHHVDFGGGLGIPYRDDNAPPPDPAALAAILRPHFRP 121 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 L K + E GR + + GILVT+V+ +K + KTFVI+D AMND +RPTLY+A+H + + Sbjct: 122 LGLKPVFEIGRMIAGNAGILVTRVVYVKPTEGKTFVIVDGAMNDLIRPTLYEAFHALRPL 181 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 P D + AD+VGP+CE+GD++AL R++ PGDL+ + GAYGAVQ+GTYNSR Sbjct: 182 SEPGPDTPRLTADVVGPVCESGDYLALGREMPEVSPGDLIAVMSAGAYGAVQAGTYNSRR 241 Query: 387 LIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 L+PE++V G Q ++RPR ++ +LI LD +P WL Sbjct: 242 LVPEVLVRGDQASVVRPRPSYDDLIRLDRLPGWL 275 >gi|121534334|ref|ZP_01666158.1| Lysine decarboxylase [Thermosinus carboxydivorans Nor1] gi|121307104|gb|EAX48022.1| Lysine decarboxylase [Thermosinus carboxydivorans Nor1] Length = 385 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 84/384 (21%), Positives = 149/384 (38%), Gaps = 16/384 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++E LA TP S I NY + G + YA+KAN + +I LA LG+ Sbjct: 11 AVEALAAKYGTPLLVLSRDQIRYNYNFLAEHLPG--VHIYYAMKANPDPRIIDELAGLGA 68 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S+GE+ + ERIV++ KT + A Q+G+ F +SESE+ + + Sbjct: 69 CFDVASDGEILALAQMGIAPERIVYANPVKTASGLAAARQTGVRKFTFDSESEIYKMAKA 128 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + KFG + L A ++G+ Sbjct: 129 VPGGTVLLRVRVD----------NPHALVDLNKKFGAHPDEALRLLTIAREQGL-DVAGL 177 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GSQ ++ A R + G N++ +D+GGG I ++ Sbjct: 178 CFHVGSQSTDAGAYVDALAACRRIFDAAAKEGFNLRILDIGGGFPIPAIGMKVDAAAMMG 237 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 +I EPGRF+ L+T+VI +++ + + LD + + Sbjct: 238 QIRTALAQYFPNTEIWAEPGRFICGTAVNLITRVIGVQQRNGQQWYFLDEGLYGTFSGII 297 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 +D ++ + I A GP C++ D + ++ DL+ + G+Y + Sbjct: 298 FD---HWDFELETFKSEPKIPATFAGPSCDSLDVLFRDKLTPPLAMDDLILVPSCGSYTS 354 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHI 400 + +N P I+ + I Sbjct: 355 ASATVFNGFAKAPIIVWEEVKSEI 378 >gi|159184868|ref|NP_354660.2| diaminopimelate decarboxylase [Agrobacterium tumefaciens str. C58] gi|159140149|gb|AAK87445.2| diaminopimelate decarboxylase [Agrobacterium tumefaciens str. C58] Length = 393 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 102/396 (25%), Positives = 172/396 (43%), Gaps = 19/396 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 + TP + Y +A+ + Y A G + Y++KAN A+I G+G Sbjct: 2 RDIVAETGTPCFLYDNSAMRQAYRDLETALSGF-ADIYYSVKANPLPAIISLFREEGAGA 60 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 +I S GE R A+ A V + I+F+G GK++ E+ ++ GI ++ES E+ + Sbjct: 61 EIASVGEYRAAVKAGVAPDNIIFAGPGKSMAELREVIEGGIGEIHIESAEEIARIEAINR 120 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + I PD A G K FG ++ ++ + + + + G+ + Sbjct: 121 PVKA--SIRINPVPDAQAGAM---RMGGKATAFGFDEEELENVLKLFANVRHIDLVGIHI 175 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + G+QI + ++ L ++ + G ++ ID+GGGLGI Y + + A Sbjct: 176 YGGTQILDADMLVSQWRHAIALAGRMAQMLGKPLETIDLGGGLGIPYFAGETSLDLAKVA 235 Query: 258 SLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + I + +I+EPGRFL G+ V +V S+K S TFV+ D M+ Sbjct: 236 AAIPDLKALLKAHPLIADAHVIVEPGRFLAGPGGLYVVEVNSVKTSRGTTFVVTDGGMHH 295 Query: 311 FMRPT----LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 + + + A IVGP+C D +A N + GDLL Sbjct: 296 HLAASGNLGQIVKRNYPIVAPAMMQAAHDETATIVGPLCTPLDTLARNATLPKLNAGDLL 355 Query: 367 YIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHII 401 I ++GAYGA S + S + E++V F +I Sbjct: 356 AILQSGAYGASASPGGFLSHTVAKEVLVEDGAFEVI 391 >gi|255074843|ref|XP_002501096.1| predicted protein [Micromonas sp. RCC299] gi|226516359|gb|ACO62354.1| predicted protein [Micromonas sp. RCC299] Length = 433 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 94/420 (22%), Positives = 159/420 (37%), Gaps = 37/420 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 TP Y Y +++ + AF V YA+KA+ N A++K G +D Sbjct: 24 EKFGTPTYVYDLARLQEQATK-AKAFPNAFGLTVRYAMKASPNAAILKVFRKAGLHIDAS 82 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E+ RA+ A ++I S +L + S+ E + Sbjct: 83 SGYEVHRAVKAGFQYDQISLSTQEFPDFFPELVDKGLKVNACSLSQLEA------YGIMF 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 A + R NP + + K + G FGI + + + + HIG Sbjct: 137 PGAKVGLRFNPGLGSGGTGKTNVGGPSSSFGIWHELLPEAKEIVERHGLI-VDRIHTHIG 195 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 S S ++ ++ L ++ +++GGG + S + S + Sbjct: 196 SG-----SDPAVWQKTSGMSLDLCRQFPTVETLNLGGGYKVGRMSYEKSTDLQVVGSPVK 250 Query: 262 QYFGNLQCKI------ILEPGRFLVADVGILVTKVISI----KKSADKTFVILDVAMNDF 311 + F + +EPG FL+A+ +V V + F+ LD M + Sbjct: 251 ELFQKFAEETGRELKLEIEPGTFLLANSCAVVCTVQDKVKTSDDADGHVFLKLDAGMTEV 310 Query: 312 MRPTLYDAYHEINYIVNPAG-DRLHIHADIVGPICETGDFIA---------LNRKIALPR 361 +RP+LY A H + + + H +VG CE+GD + R + Sbjct: 311 LRPSLYAAQHPLVTVSAAGELPKEHASYVVVGHCCESGDLMTPTPDDAEGIAERTMGAVD 370 Query: 362 PGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDS-IPA 418 GDLL +E GAY A S YNS PE+M H+IR + T ++++ + +P Sbjct: 371 IGDLLVVEGAGAYCAGMSSKNYNSFPEAPEVMKGADGTMHLIRQKQTLEQILVNEVELPD 430 >gi|329945379|ref|ZP_08293142.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 170 str. F0386] gi|328529001|gb|EGF55932.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 170 str. F0386] Length = 486 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 99/450 (22%), Positives = 175/450 (38%), Gaps = 43/450 (9%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--------MDTMVCYAL 59 +G L +++ ++ +P + + ++S A YA Sbjct: 36 DGELALGGLTVSEILADAPSPVFVLDEADLRGRAASWSAAMAEEFWSGYGLRGGEAFYAG 95 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELR---------RALAAPVPAERIVFSGVGKTIDE 110 KA V + + G G+D S EL A A R+ G GKT E Sbjct: 96 KAFLTTQVARIVLQEGMGIDTASRVELAVGLTGLEKVDGPEATTHARRLGLHGNGKTPAE 155 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVSLGK--------KAPIAFRVNPDINANTHKKI 162 + A++ + ++S E+ L + +A + R+ I+A H+ I Sbjct: 156 VTTAVRHRVGHLVIDSPEEVDHAVAAVHELRRSGDFGADERARVMVRLTTGIHAGGHEYI 215 Query: 163 STGKKEDKFGIPIHQ--IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL 220 ST ++ KFG+ + ++++G+ HIGSQI + F +A ++ L Sbjct: 216 STAHEDQKFGLSVSTGAARRTIDAIVAADELELAGLHSHIGSQILDMAGFREAVGVVLGL 275 Query: 221 TQQLR-SNGHNIQHIDVGGGLGIAYHSDHRP-PSSSDYASLIHQYFGNLQ-------CKI 271 ++ GH +D+GGG GIAY PS + A + + + Sbjct: 276 RHEIAVDTGHLCPEVDLGGGYGIAYTGADPVAPSPAQVARTLAEAVRETCERLGDEVPTV 335 Query: 272 ILEPGRFLVADVGILVTKVISIKKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +EPGR + + + V +K+ + +V +D M+D +RP LY+A + Sbjct: 336 SIEPGRAVAGPTTVTLYTVTGLKRVELGEGASRLYVSIDGGMSDNIRPALYEAAYTALVA 395 Query: 327 VNPAGDRL-HIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNS 384 A +VG CE+GD + + + GD+L + TGAYG + +YN Sbjct: 396 NRRPDPSAGLTRARVVGKHCESGDVVVRDVDLPADLAVGDVLAVPATGAYGRSMASSYNL 455 Query: 385 RLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 V + I T ++L+ L+ Sbjct: 456 FTRPGVRWVREGESGWILRPETIEDLLRLE 485 >gi|310643688|ref|YP_003948446.1| orn/dap/arg decarboxylase 2 [Paenibacillus polymyxa SC2] gi|309248638|gb|ADO58205.1| Orn/DAP/Arg decarboxylase 2 [Paenibacillus polymyxa SC2] Length = 425 Score = 181 bits (458), Expect = 3e-43, Method: Composition-based stats. Identities = 108/411 (26%), Positives = 169/411 (41%), Gaps = 18/411 (4%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 TPFY Y A+ + + V YALKAN N + L LG G++I S Sbjct: 14 EHPTPFYYYDGDALHAHVSSLLARL-HPAVRVHYALKANGNVPLAGLLRSLGCGVEIASA 72 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GE+ A+ A AE ++++G GKTI E+ A+ GI C +VES EL+ L A G Sbjct: 73 GEMFVAMEAGYAAEDVLYAGPGKTIAELREAITCGIGCIHVESVRELRLLEDIAAQTGVF 132 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 A R+NPD + + G FG+ Q+ + P V G+ ++ G+Q Sbjct: 133 VRAAVRINPDNDLSGATIKMGGVP-RPFGVDEGQLDHFFKVLEDCPHVYFQGIQVYTGTQ 191 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY------A 257 + + + +F L +++++ H GG + H P D+ A Sbjct: 192 MLKADQILASFANTLQLAERVQAQYSVAMHTINLGGGFGVPYFAHEQPLDMDHVIDGLNA 251 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM----- 312 ++I+E GR+LVA G+ V + + KKS + FV+ D MN ++ Sbjct: 252 LAEQTRSRMPGVRLIIESGRYLVAQSGMYVCRALYTKKSKGEKFVVADGGMNHYVAATFR 311 Query: 313 -RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 R + I + IVGP+C D I ++ + GD + Sbjct: 312 GRRLRDNYPVRIMRRQSAEVSTELETVSIVGPLCTPEDCIVKKAELPPIQEGDYIAFPNA 371 Query: 372 GAYGAVQSGTY-NSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS---IPA 418 GAYG S Y E++ + HIIR +L+ +P Sbjct: 372 GAYGLSYSPLYFLGHATPAELLDYRGKVHIIREHGDRTDLLHHQRMIALPE 422 >gi|308813676|ref|XP_003084144.1| diaminopimelate decarboxylase (ISS) [Ostreococcus tauri] gi|116056027|emb|CAL58560.1| diaminopimelate decarboxylase (ISS) [Ostreococcus tauri] Length = 518 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 92/420 (21%), Positives = 156/420 (37%), Gaps = 33/420 (7%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 + K+A TP Y Y +E + V YA+KA+ N A++K G Sbjct: 107 DVVKVAEAHGTPTYVYDAPTLEARAAVAKGFPNAYGLTVRYAMKASPNAAILKIFKKAGL 166 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D S E RA+ A + I S +L + + E Sbjct: 167 HVDASSGYECERAMRAGFAGDEISLSTQELPSFFPELVEKGVRINACSLDQLERFGAA-- 224 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I R NP + + K + G FGI + + + +K+ V Sbjct: 225 ----FPGGEIGVRFNPGLGSGGTGKTNVGGPSSSFGIWYELLPRVKEIVAEY-NLKVVRV 279 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 HIGS S ++ + ++ L ++ +++GGG + S + + Sbjct: 280 HTHIGSG-----SDPAVWQKVSGMSLDLCREFPDVTTLNLGGGYKVGRMSYEKSTDLAVV 334 Query: 257 ASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSA---DKTFVILDVA 307 + + F + +EPG FL+A+ +VT+V + TF+ LD Sbjct: 335 GVPVKEAFEKFAEETGRKLKLEIEPGTFLLANSCAVVTRVQDKVTTGTAEGHTFLKLDCG 394 Query: 308 MNDFMRPTLYDAYHEINYIVNPAG-DRLHIHADIVGPICETGDFIA---------LNRKI 357 M + +RP+LY + H + + +VG CE+GD + R + Sbjct: 395 MTEVLRPSLYGSQHPLVSVTKDGTLPETQAEYVVVGHCCESGDLMTPAPDEPETISERTM 454 Query: 358 ALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNG-SQFHIIRPRMTFQELIELDS 415 GD + IE +GAY A + YNS PE+M G IR + T +++ + Sbjct: 455 GEVNIGDFIVIEGSGAYCAGMASKNYNSFPEAPEVMRRGAGDMVCIRRKQTLDQILSNEI 514 >gi|330952171|gb|EGH52431.1| diaminopimelate decarboxylase [Pseudomonas syringae Cit 7] Length = 279 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 135/280 (48%), Positives = 177/280 (63%), Gaps = 1/280 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AE+IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLSVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES EL+ L A L +API+ RVNPD++A TH ISTG KE+KFGI I Sbjct: 121 CFNVESTDELERLQGVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y AS LP +++ GVD HIGSQ+ +E F A L DL +L G ++ HID+GGGL Sbjct: 181 VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLV 280 G+ Y + PP ++DY + + ++ EPGRF+V Sbjct: 241 GVRYRDE-EPPLAADYIKAVRERLAGRDLGLLFEPGRFIV 279 >gi|196233372|ref|ZP_03132216.1| Orn/DAP/Arg decarboxylase 2 [Chthoniobacter flavus Ellin428] gi|196222512|gb|EDY17038.1| Orn/DAP/Arg decarboxylase 2 [Chthoniobacter flavus Ellin428] Length = 485 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 94/456 (20%), Positives = 173/456 (37%), Gaps = 47/456 (10%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--LKANSNQAVIK 69 + V + +LA +P + +S A+ + Y AF V +A K N A+ + Sbjct: 32 EIDGVPVAELARNYGSPLFVFSEKALREKYREAHRAFSRRYPDVQFAWSYKTNYLNAICR 91 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 GS ++VS E +A V +I+F+G K +++ A+ V++ E Sbjct: 92 VFHQEGSIAEVVSGFEYEKARRNGVDGSKIIFNGPHKERADLERAVNE-RAMIQVDNIDE 150 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L TL + IA RV+ +T + F ++ + +TL Sbjct: 151 LLTLASIVRDRTEPVSIALRVHLQTGTHTVW------SKFGFNGDDGEVLQIIRRITTLH 204 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKL-LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 +++ G+ H+G+ I E++ A + + + + I+++++GGG + Sbjct: 205 NLRLQGLHCHVGTFILDPENYRVAARRLVELAIEAEKIGAGQIRYLNLGGGFASHARLHY 264 Query: 249 RP-------PSSSDYASLIHQYFGNLQC------KIILEPGRFLVADVGILVTKVISIKK 295 + PS YA I + L ++ LE GR LV D G L++ V+++KK Sbjct: 265 QYLPPEQTTPSLDRYAEAICETIIGLWPAGRDLPRLYLETGRALVDDAGYLISSVVAVKK 324 Query: 296 SADKTFVILDVAMNDFMRPTL--------------------YDAYHEINYIVNPAGDRLH 335 + + +A + Y P D Sbjct: 325 RHLPSQMQTAMAAYGKSAAVMPQGNSRHALVLDAGINLLYTTAWYQPKILPARPCLDTP- 383 Query: 336 IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 + G +C D I + + GD + + GAY QS + + +M++ Sbjct: 384 EPTTVFGCLCMNIDVIREDAPLPSLTTGDQVVLHPVGAYNITQSMQFITY-RPAVVMIDS 442 Query: 396 S-QFHIIRPRMTFQELIELDSIPAWLQ-KTPKQSSE 429 + H+IR R + EL++IP L +T E Sbjct: 443 ERKVHVIRRRENLDYVQELEAIPEHLATRTAVSRPE 478 >gi|20093921|ref|NP_613768.1| diaminopimelate decarboxylase [Methanopyrus kandleri AV19] gi|19886865|gb|AAM01698.1| Diaminopimelate decarboxylase [Methanopyrus kandleri AV19] Length = 405 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 112/378 (29%), Positives = 179/378 (47%), Gaps = 15/378 (3%) Query: 39 KNYLTFSNAFDGMD--TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA 96 K + AF VCYA+KAN N +++ + D+VS E++ A+ A A Sbjct: 28 KAAREYQEAFSWFPDRVYVCYAMKANFNPYLVEHIVDETRAADVVSLWEMKVAVNAG--A 85 Query: 97 ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA 156 E +V +G K+ DEI A++ + NV+S E + + + A G++A +A RVNP ++ Sbjct: 86 ETVVVNGNAKSSDEIRAAVER-SWVINVDSFEEFQRIEKIARHEGERALVALRVNPKVSP 144 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL 216 +TH I+T + KFG+ + + V+ G+ HIGSQI + F +A + Sbjct: 145 DTHSHIATAVEGSKFGVELEIAERVCRRMIESEWVEFLGLHYHIGSQITDLRPFSEALR- 203 Query: 217 LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL-----IHQYFGNLQCKI 271 + I ++++GGGLGI Y PS D A + + + Sbjct: 204 SVRTFLEDTGLIEEISYLNIGGGLGIRYRRGEEVPSPHDLAEELQEDLKELHSESSGFDL 263 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 LEPGR +V + GILVT V K + +V +D MN +RP LYDAYHE+ Sbjct: 264 YLEPGRSIVGEAGILVTSVR-QVKRGRRRWVFVDTGMNALIRPALYDAYHEVVVHGGDYS 322 Query: 332 DRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE 390 A + GP+CE+GD +A +R++ GDL+ GAY + YN + Sbjct: 323 --ATEKASVAGPLCESGDVLAEDRELPIDISEGDLVVFLSAGAYCESMASNYNCYPIPGS 380 Query: 391 IMVNGSQFHIIRPRMTFQ 408 ++V + +R ++ Sbjct: 381 VVVRNGEITGVRRVQDYE 398 >gi|71908053|ref|YP_285640.1| Orn/DAP/Arg decarboxylase 2 [Dechloromonas aromatica RCB] gi|71847674|gb|AAZ47170.1| Orn/DAP/Arg decarboxylase 2 [Dechloromonas aromatica RCB] Length = 412 Score = 180 bits (457), Expect = 4e-43, Method: Composition-based stats. Identities = 112/405 (27%), Positives = 178/405 (43%), Gaps = 16/405 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M+ F +G L + L +LA V TPFY Y + + YA+ Sbjct: 12 MTQFATVDGELQVGGLPLSRLAERVGQTPFYAYDRELLRTRVRELKAVLP-AGIKLHYAM 70 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN A++ +A L G+D+ S GE++ AL A + I F+G GK E+ A+ +G+ Sbjct: 71 KANPMPALVAFMASLVDGIDVASGGEMKVALDAGGVPQEISFAGPGKRDAELRQAVAAGV 130 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 NVES EL L + + LG A +A RVNPD G + +FG+ Q+ Sbjct: 131 L-INVESFRELDLLARISTELGLPARVAVRVNPDFELKGSGMKMGGGPK-QFGVDAEQVP 188 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL-LRDLTQQLRSNGHNIQHIDVGG 238 L A L G + GSQ + ES +A + R ++ +++GG Sbjct: 189 LLLARIGELKLS-FEGFHLFAGSQNLKPESICEAQQKSYELALALSRHAPSPVRFLNLGG 247 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQ-----YFGNLQCKIILEPGRFLVADVGILVTKVISI 293 G GI Y RP S + Q +++E GR+LV + GI V+++I Sbjct: 248 GFGIPYFPGERPLDLSSIGDNLAQLASRAAQDFPLASLVIELGRYLVGEAGIYVSRIIDR 307 Query: 294 KKSADKTFVILDVAMNDFMR----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S +T+++ D +N + + I N A +VGP+C D Sbjct: 308 KISRGQTYLVTDGGLNHHLSASGNFGQVIRKNYPVSIGNRMNAEDIEIATVVGPLCTPLD 367 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 + +++ PGDL+ + ++GAYGA S + + E++V Sbjct: 368 ILGDRMALSVAMPGDLVVVFQSGAYGASASPQSFLGHPEVTEVLV 412 >gi|24213747|ref|NP_711228.1| diaminopimelate decarboxylase [Leptospira interrogans serovar Lai str. 56601] gi|45658455|ref|YP_002541.1| diaminopimelate decarboxylase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24194569|gb|AAN48246.1| diaminopimelate decarboxylase [Leptospira interrogans serovar Lai str. 56601] gi|45601698|gb|AAS71178.1| diaminopimelate decarboxylase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 422 Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats. Identities = 98/413 (23%), Positives = 156/413 (37%), Gaps = 24/413 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + +A TP + YS IEK+ + V YA+KAN N+ V++ + G Sbjct: 15 VRSIAGQFGTPVFVYSRERIEKSCEVALAFPNAYGLTVRYAMKANPNRTVLEIMKRKGIQ 74 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D SE E+ RA+ E+I+ + +L + ++ + E Sbjct: 75 IDASSEYEVLRAIHYGFKPEQIMLTSQELAKGLKELVEKGVVFNACSLRQLET------F 128 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 +L ++ R NP + + KK G K FGI I+ + AS +KI V Sbjct: 129 GNLFPGKEVSVRFNPGLGSGQTKKTDVGGKTSSFGIWYEDINQVKEIASKFD-LKIFKVH 187 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG---LGIAYHSDHRPPSSS 254 HIGS E + ++ D+ Q G P Sbjct: 188 THIGSGS-DPEVWKVVAQVSLDIAAQFSECKILNLGGGFKVGRMEDEKTTDFQKIGPPVV 246 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS--IKKSADKTFVILDVAMNDFM 312 + + G I EPG FL+ + G ++T V TFV LD M+ Sbjct: 247 ELFQEFAKKHGTELRLEI-EPGSFLMVNNGSILTTVDDVVSTGPGGYTFVKLDAGMDVNT 305 Query: 313 RPTLYDAYHEINYIVNPA-GDRLHIHADIVGPICETGDFIALN-------RKIALPRPGD 364 RP+LY A H + + VG CE+GD R + GD Sbjct: 306 RPSLYAAKHPLVVVSKEGVHSGKTADYVYVGHCCESGDLFTQAEGGGPITRITGEAKLGD 365 Query: 365 LLYIEKTGAYGAVQSG-TYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDS 415 + +E GAY + S YNS E++V+ F +IR R ++++ + + Sbjct: 366 YVVMEGAGAYCSSMSTKNYNSFPETAEVLVDSDGSFQLIRRRQNWEQIFQNEV 418 >gi|327537995|gb|EGF24689.1| Orn/DAP/Arg decarboxylase 2 [Rhodopirellula baltica WH47] Length = 388 Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats. Identities = 90/378 (23%), Positives = 171/378 (45%), Gaps = 16/378 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++LA TP S + + Y NA G+D + YA KAN + + TL + + Sbjct: 25 KELAEKHGTPLLVVSRSKAIETYWAMKNALPGVD--LYYAAKANPDLHFLSTLNGENAFI 82 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D+ S GEL+ ALAA +R++ + KT + ++G+ F ++ E + + + Sbjct: 83 DVCSPGELKAALAAGFTPDRMLHTHPCKTDANLWECYEAGVNWFVFDNPIEAEKIRR--- 139 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + VN + T S KFG P+H+ L A A G+K+ G Sbjct: 140 -------LTPDVNLLLRLATTGASSRINLSAKFGCPMHEALELLATAK-AKGLKVRGFSF 191 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DY 256 H+GSQ + + + + +R++ + GH+++ +D+GGG Y D + Sbjct: 192 HVGSQCLNPQDYVEVLRSVREVWDEATKAGHHLEVLDIGGGFPAPYREDAPSIEAFGEVI 251 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + + + FG+L ++I EPGR L + L+T+VI + + + LD + + Sbjct: 252 TNGLREIFGDLPIRLIAEPGRGLCTESVTLITRVIGKSRRWELPWFFLDDGIYGSFSGKI 311 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 +D + +V G R + + GP C++ D ++ ++ + G+L+ + GAY A Sbjct: 312 FDHT-DFPLLVENDGSRETVPCVVAGPTCDSTDIVSRDQWLPDLEVGELVLVPSMGAYAA 370 Query: 377 VQSGTYNSRLLIPEIMVN 394 + +N + + ++ Sbjct: 371 ASASPFNGLPMANSVAID 388 >gi|32475383|ref|NP_868377.1| lysine/ornithine decarboxylase [Rhodopirellula baltica SH 1] gi|32445924|emb|CAD78655.1| lysine/ornithine decarboxylase [Rhodopirellula baltica SH 1] Length = 398 Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats. Identities = 90/378 (23%), Positives = 171/378 (45%), Gaps = 16/378 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++LA TP S + + Y NA G+D + YA KAN + + TL + + Sbjct: 35 KELAEKHGTPLLVVSRSKAIETYWAMKNALPGVD--LYYAAKANPDLHFLSTLNGENAFI 92 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D+ S GEL+ ALAA +R++ + KT + ++G+ F ++ E + + + Sbjct: 93 DVCSPGELKAALAAGFTPDRMLHTHPCKTDANLWECYEAGVNWFVFDNPIEAEKIRR--- 149 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + VN + T S KFG P+H+ L A A G+K+ G Sbjct: 150 -------LTPDVNLLLRLATTGASSRINLSAKFGCPMHEALELLATAK-AKGLKVRGFSF 201 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DY 256 H+GSQ + + + + +R++ + GH+++ +D+GGG Y D + Sbjct: 202 HVGSQCLNPQDYVEVLRSVREVWDEATKAGHHLEVLDIGGGFPAPYREDAPSIEAFGEVI 261 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + + + FG+L ++I EPGR L + L+T+VI + + + LD + + Sbjct: 262 TNGLREIFGDLPIRLIAEPGRGLCTESVTLITRVIGKSRRWELPWFFLDDGIYGSFSGKI 321 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 +D + +V G R + + GP C++ D ++ ++ + G+L+ + GAY A Sbjct: 322 FDHT-DFPLLVENDGSRETVPCVVAGPTCDSTDIVSRDQWLPDLEVGELVLVPSMGAYAA 380 Query: 377 VQSGTYNSRLLIPEIMVN 394 + +N + + ++ Sbjct: 381 ASASPFNGLPMANSVAID 398 >gi|325120746|emb|CBZ56301.1| Diaminopimelate decarboxylase protein, related [Neospora caninum Liverpool] Length = 563 Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 107/457 (23%), Positives = 166/457 (36%), Gaps = 70/457 (15%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMD-------------------------------- 52 QTPFY Y I +N AF Sbjct: 12 HQTPFYLYDEARIRENCRRLLAAFSWASEPFSTSQSALENVPRSPREALENRLGVRAASP 71 Query: 53 ---TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 +A+KA A+++ L G G D S EL A AA ERI F+ ++ Sbjct: 72 SGAFTNYFAVKATPTPAILEILREEGLGADCSSLAELLLAEAAGFRGERIFFTSNDTPLE 131 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANT---HKKISTGK 166 E A G ++ + +L F + + T + I Sbjct: 132 EFLKARDLGAIINLDDASHLDFLHEKLGGALPSILCFRFNPSAESRQATVQSNPMIMGRP 191 Query: 167 KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 +E KFG+ Q+ + A + + M + + + E A LL + Sbjct: 192 EESKFGMTKTQLFRCISRARAWGVCRFALHAMILSNSLSVDEVVETARLLLTVAAEIKER 251 Query: 227 NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFL 279 G I+ I++GGG G+ Y + + + ++ I ++ +I+ E GR + Sbjct: 252 LGTTIEMINLGGGFGVPYRPEEKDLDLHEVSARIRTWYKCTLALQGLAGTRIVTENGRLI 311 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH-- 337 AD G+LVT+VI KK+ K FV +D M MRP +Y AYH I+ + + + Sbjct: 312 TADAGVLVTRVIHQKKT-YKRFVGVDACMAHLMRPGMYGAYHHISVVPDRDRHDPRLPSR 370 Query: 338 ---------------------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 D+VG +CE D A++R + GDLL I GA+G Sbjct: 371 RNLFFSPDDEDEEAGVSDDAIYDVVGGLCENNDKFAVDRPLPRVDIGDLLLIHDVGAHGH 430 Query: 377 VQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 YN RL E + + +IR T +L Sbjct: 431 SMCFNYNGRLRCAEYLRRLNGEVVMIRRAETLNDLFA 467 >gi|227536835|ref|ZP_03966884.1| diaminopimelate decarboxylase [Sphingobacterium spiritivorum ATCC 33300] gi|227243262|gb|EEI93277.1| diaminopimelate decarboxylase [Sphingobacterium spiritivorum ATCC 33300] Length = 355 Score = 180 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 119/339 (35%), Positives = 177/339 (52%), Gaps = 5/339 (1%) Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 V YALKAN N +++ + G G D VS E+++++ A++I F+GVGK+ Sbjct: 7 KRGFHVHYALKANFNDRILQLIQAKGFGADCVSGNEVKKSIETGFKADKITFAGVGKSDK 66 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 EI AL I+ FNVES E++ +N A G+ A ++ R+NP+++A TH I+TG E+ Sbjct: 67 EIRYALAHEIFAFNVESIEEMEVINALAGETGQIANVSLRINPNVDAQTHHYITTGLDEN 126 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 KFGIP ++ A + + G+ HIGSQI + F + + G Sbjct: 127 KFGIPNSELEKSAAILRESKHLNLVGLHFHIGSQIVDLNVFKSLCVKVNEWKNWFEERGT 186 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSS---DYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 I+ ++VGGGLG+ Y P + + N ++ E GR LVA G L Sbjct: 187 TIKVLNVGGGLGVDYKDPDGNPVTDFEAYFDIFDRFLERNSHQEVHFELGRALVAQCGSL 246 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 +++V+ K K F+ILD M + MRP LY AYH+I + D+ I+ D+VGPICE Sbjct: 247 LSRVLYTKSGIKKNFLILDAGMTELMRPALYQAYHKIERVGE--SDQEEINYDVVGPICE 304 Query: 347 TGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + D + + + GDL+ I GAYG V S YN R Sbjct: 305 SSDCFGKEVPLPVSKRGDLIAIRTAGAYGEVMSSHYNLR 343 >gi|77165424|ref|YP_343949.1| Orn/DAP/Arg decarboxylase 2 [Nitrosococcus oceani ATCC 19707] gi|76883738|gb|ABA58419.1| Orn/DAP/Arg decarboxylase 2 [Nitrosococcus oceani ATCC 19707] Length = 410 Score = 180 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 107/404 (26%), Positives = 172/404 (42%), Gaps = 16/404 (3%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 F L V L + A V TPFY Y I + + + YALK Sbjct: 11 DYFPIKNDCLLVGGVPLTEFAARVGSTPFYAYERRLISERIQHLRTHLP-SEIYIHYALK 69 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN A+ +A L GLD+ S GELR AL P E I F+G GK+ E+ +L +GI Sbjct: 70 ANPMPALAGHIAPLVDGLDVASLGELRVALDTGTPPESISFAGPGKSDAELAASLAAGIT 129 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 E++ + A G++ +A RVNP+ T G + FG+ ++ + Sbjct: 130 INMESEG-EMERIAHLAEKQGRRPRVAVRVNPNFELKTSGMKMAGGPK-PFGVDAERVPA 187 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGGG 239 + A +TL G + GSQ + E+ +A + L +L + + +++GGG Sbjct: 188 MLARINTLDL-DFQGFHIFSGSQNLRAEAIIEAQERTFTLALELARSAPTPVRLLNIGGG 246 Query: 240 LGIAYHSDHRPPSSSDYASL-----IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GI Y ++P A + ++ LE GR+LV + GI V ++I K Sbjct: 247 FGIPYFPGNKPLDLRPIADNLAASLPKLQRQIPEAEVTLELGRYLVGEAGIYVCEIIDRK 306 Query: 295 KSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 S F+I + ++ + + N A +VGP+C D Sbjct: 307 ISRGHVFLITNGGLHHHLAASGNFGQVIRKNYPVVVGNRIQGSTREIASVVGPLCTPLDL 366 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 +A ++A GDL+ + ++GAYG S + S + E++V Sbjct: 367 LADRMELAQAEAGDLIVVFQSGAYGRSASPLGFLSHPVPAEVLV 410 >gi|119384035|ref|YP_915091.1| Orn/DAP/Arg decarboxylase 2 [Paracoccus denitrificans PD1222] gi|119373802|gb|ABL69395.1| Orn/DAP/Arg decarboxylase 2 [Paracoccus denitrificans PD1222] Length = 414 Score = 180 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 100/405 (24%), Positives = 164/405 (40%), Gaps = 20/405 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L + A TP Y Y+T +E+ V +A+K+N N A++ + Sbjct: 12 LAEAAARFGTPAYVYATDVVEERLAHLRAHLGRW-FAVSFAVKSNPNPALLGWMRDRLDY 70 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LDI S GEL A A RI F+G K E+ A+++G+ +ES E + + A Sbjct: 71 LDISSGGELALGREAGWDAARISFTGPAKREAELRAAIEAGLGELVLESLREARLADAVA 130 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 +G+ P+ R+ P G+ FG+ + + + LP ++I G+ Sbjct: 131 AEMGRVQPVLVRLAPARVPKGFGDQMAGRPS-PFGVDVEDAAEILPQIAALPNLRIIGLH 189 Query: 198 MHIGSQIDQIESFHKAFKLLRD-LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 ++ G+Q + E+ + +++ + + + G GLGI YH + Sbjct: 190 IYSGTQCLKPEAICENWRIFMQVFRDTCAALDLRPEKLIFGAGLGIPYHPGDSALDLAAI 249 Query: 257 A-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 A +++LE GR+LV G VT+V+S+K+S I D +N Sbjct: 250 AAEIGPELDAFRAEPRLADARLVLELGRYLVGPAGWFVTRVLSVKQSRGTRIAICDGGLN 309 Query: 310 DF------MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 D L Y + G R DI GP+C + D + + G Sbjct: 310 DNLAASGNFGMVLRRNYVMHRVGGDEDGTRPEEKQDISGPLCTSIDKLGGGVALPRLEEG 369 Query: 364 DLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQ---FHIIRPR 404 DL+ I GAYG S + S + E+++ G Q IR R Sbjct: 370 DLIAIHACGAYGPTASPLHFISHPMPAEVLLTGGQMQDVTRIRDR 414 >gi|319789913|ref|YP_004151546.1| Orn/DAP/Arg decarboxylase 2 [Thermovibrio ammonificans HB-1] gi|317114415|gb|ADU96905.1| Orn/DAP/Arg decarboxylase 2 [Thermovibrio ammonificans HB-1] Length = 450 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 79/425 (18%), Positives = 154/425 (36%), Gaps = 27/425 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKT 70 + V +++L +P + +S + + NAF + ++ K N A+ Sbjct: 35 IDGVPVDELVERFGSPLFVFSEKRLRNKFRELKNAFTLRYPNVEFSWSYKTNYLDAICAI 94 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G ++VSE E +A VP +I+++G K +D + A + G N++ E+ Sbjct: 95 LHSEGETAEVVSEFEYEKARRLGVPGNQIIYNGPYKPLDSLRRAAREGAR-INIDHFEEI 153 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 L Q A LG K + R+N D E+ + + Sbjct: 154 ADLEQVADELGTKIKVGIRLNMDTGIKPQWSRFGFNLENGQALD------AVKRIAAGGK 207 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-------- 242 +++ G+ HIG+ I + ++ + + Q+ GG Sbjct: 208 LELVGLHCHIGTFILEPRAYENEVRKMVQFAYQVEEQFGFKIEYLDIGGGFPSKNRLKGV 267 Query: 243 AYHSDHRPPSSSDYASLIHQY-----FGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 D PS ++A + K+ILE GR +V + G L+T V + K+ Sbjct: 268 YLPPDVAVPSIDEFAERVCNALLESLKPGDYPKLILESGRAIVDEAGFLITTVHASKRMP 327 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 D + A + ++ N ++ + GP+C D + ++ Sbjct: 328 DGRRAYVLDA---GVNILFTAFWYHFNVELDREVQGPSEPCILYGPLCMNIDVVDDAVQL 384 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIELDSI 416 G L + GAY Q + R +++ + +IR +++ + + Sbjct: 385 PPLPRGTRLILSPVGAYNVTQWMQFI-RYRPAVVLIGENGEVDLIREAEDLSDIVRREKL 443 Query: 417 PAWLQ 421 P L+ Sbjct: 444 PERLK 448 >gi|288941528|ref|YP_003443768.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Allochromatium vinosum DSM 180] gi|288896900|gb|ADC62736.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Allochromatium vinosum DSM 180] Length = 410 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 102/403 (25%), Positives = 168/403 (41%), Gaps = 17/403 (4%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F + L + + +LA V TPFY Y I A D + YA+KAN Sbjct: 12 FPVADNQLVIGALPIARLAERVGRTPFYAYDRALISARVAQLRQALPD-DIHLHYAIKAN 70 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 AV++ LA L G D+ S GEL+ AL +P +I F+G KT E+ A+ +GI Sbjct: 71 PMPAVVQHLAGLVDGFDVASGGELKTALDTSMPPHQISFAGPAKTPGELRQAIAAGIVIN 130 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 EL+ Q +LG + +A RVNPD + +G + +FGI ++ ++ Sbjct: 131 LESER-ELRAAVQAGEALGIRPRVAVRVNPDFELKSAGMKMSGGPK-QFGIDAERVPAVL 188 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A L + G + G+Q + E+ +A + +L +L + + GG Sbjct: 189 AEMKCLDL-EFIGFHIFSGAQNLRAEAISEAQEKTLELAMRLALDVPSPVRALNLGGGFG 247 Query: 243 AYHSDHRPPSSSDYASL------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 + PP ++I+E GRF V + G+ V +V+ K S Sbjct: 248 IPYFPGEPPLDLVAVGERLSELLPAARRALPDTELIIELGRFFVGEAGVYVCRVVERKVS 307 Query: 297 ADKTFVILDVAMNDF-----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 + F++ D ++ + + + D A +VGP+C D + Sbjct: 308 RGQVFLVTDGGLHHHLAASGNFGQVIRKNYPVLVANRVESDGDPETASVVGPLCTPLDLL 367 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 A + R GDL+ + ++GAYG S T + E++V Sbjct: 368 ADRMPLGHAREGDLVAVMQSGAYGLTASPTAFLGHPTAVEVLV 410 >gi|218885768|ref|YP_002435089.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756722|gb|ACL07621.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 474 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 67/431 (15%), Positives = 146/431 (33%), Gaps = 24/431 (5%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSN 64 G L + +LA TP A+ + A D + M+ Y+ K N Sbjct: 35 EGGVLAVGGMPCTRLARDYGTPLLVVDAAALRRRVQDVQAALDEVLPGAMLAYSYKTNCI 94 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +++ L G G +++S E + + V ++V++GV K+ + I A+ G N+ Sbjct: 95 PGILRMLHDAGVGAEVISPYEYWLSESLGVDGGQVVYNGVDKSRESIARAVARGTL-VNI 153 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINAN-----------THKKISTGKKEDKFGI 173 +S E+ + A + A + R+ + +A + + + Sbjct: 154 DSRDEVDVVLAAAREQRRTARVGLRLALNRSAQFGLDPEGDDLAHVVRNCLDAPDHADLV 213 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 +H + A S +S + + + + + N ++ Sbjct: 214 ALHFNVTSNARHSGYHARCLSRALDVMSWLAREHGVRIRLLDVGGGFGVETSKNMSGAEY 273 Query: 234 IDVG-----GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ---CKIILEPGRFLVADVGI 285 G D A + + + +EPGR L + + Sbjct: 274 GLYRLFGVQPGAAWMDPFQDFRLYLRDLADTLRAFCAQNDLPVPGVCIEPGRLLTSKAEL 333 Query: 286 LVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 L+T+V ++K+ + A D ++ + + G +C Sbjct: 334 LLTQVKAVKERPGAEPFAITDAGRLSQAFPC-DFEWHEAFLASDLRRPPSRPYTVTGRVC 392 Query: 346 ETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 D++ + + GD+L + GAY + + + + + V + ++R R Sbjct: 393 TRSDWLYRGKLLPELATGDVLAVMDAGAYFSSYAMNF-AFPRAAVVAVEDGRARVLRRRE 451 Query: 406 TFQELIELDSI 416 F+ L+ +D + Sbjct: 452 DFRHLVGMDDV 462 >gi|225850437|ref|YP_002730671.1| diaminopimelate decarboxylase [Persephonella marina EX-H1] gi|225646093|gb|ACO04279.1| diaminopimelate decarboxylase [Persephonella marina EX-H1] Length = 451 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 97/426 (22%), Positives = 169/426 (39%), Gaps = 29/426 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--ALKANSNQAVIKT 70 + V + +L +P + S + + Y NAF V + + K N +AV Sbjct: 35 IDGVPVSELVERYGSPLFVISERKLRERYRKIYNAFSSRYPNVQFGWSYKTNYLKAVCSV 94 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G+ ++VS E +A + + I+F+G KT+D ++ A G ++ E+ Sbjct: 95 LHQEGAIAEVVSAFEYEKARNLGIDGKNIIFNGPHKTLDILEKAASEGAMIH-IDHFDEI 153 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 L + A LGKK +A RVN D + E + +T Sbjct: 154 IDLEKIADRLGKKIKVAIRVNMDTGIHPQWDRFGFNLETGQALD------AVKRIATGGK 207 Query: 191 VKISGVDMHIGSQIDQIESF-HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG-------I 242 + ++G+ HIG+ I + E++ + KL++ + + G I+++D+GGG Sbjct: 208 LVLNGLHSHIGTFILEPEAYGKEVEKLVKLAYEIEDNFGFKIEYLDIGGGFPSKNKLKGT 267 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNL-----QCKIILEPGRFLVADVGILVTKVISIKKSA 297 D PS +YA I + + K+ILE GR ++ + L+T + + K+ Sbjct: 268 YLPPDVLVPSVEEYAEKITEALYSNLRPGDFPKLILETGRAIIDEAEYLITTIFASKRLP 327 Query: 298 DKTF-VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 D I D +N Y EI+ V + + I GP+C D I Sbjct: 328 DGRKAYIADAGVNILFTAFWYKFNIEIDREVQ----GTNEPSVIYGPLCMNIDVIDDGTM 383 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIELDS 415 + G L I GAY Q + +M+ I+R R ++ + Sbjct: 384 LPPLERGTRLIISPVGAYNNTQWMQFIEY-RPNVVMIMEDGSVEIVREREDISDIERRER 442 Query: 416 IPAWLQ 421 +P L+ Sbjct: 443 LPEKLR 448 >gi|227498854|ref|ZP_03928994.1| lysine decarboxylase [Acidaminococcus sp. D21] gi|226904306|gb|EEH90224.1| lysine decarboxylase [Acidaminococcus sp. D21] Length = 391 Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 83/384 (21%), Positives = 159/384 (41%), Gaps = 16/384 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ +LA TP S IEKNY M + YA+KAN + +++T+ + Sbjct: 13 AVSRLAERYGTPLLVLSLEQIEKNYDILRTHIPQM--RIHYAMKANPDLRILETMIDKNA 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S+GE+R + VP E+++++ KT + + +G+ +SESE+ + + Sbjct: 71 DFDVASDGEIRTLASLGVPGEKMIYANPIKTEAGLKACVDAGVTRMTFDSESEICKIAKW 130 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + KFG P + SL A G+ ++G+ Sbjct: 131 VPHATVLLRLRID----------NPKAHVDLNKKFGAPREKALSLMRLARQ-AGLDMAGI 179 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GSQ+ +S+ AF ++ +L ++ ++ G ++ +D+GGG I H ++ Sbjct: 180 AFHVGSQVTTADSYLHAFDVVHELLEEAKNEGFDLPIMDIGGGFPIPETGVHYNLTAILD 239 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 I EPGR++ L+TKVI + + + + LD + + Sbjct: 240 QIAARLREDFSDKIIWSEPGRYMAGTAQNLITKVIGVNERNGQVWYFLDDGIYGTFSGVI 299 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 +D + + I A GP C++ D + + DLL + GAY + Sbjct: 300 FDQWDYKLISFK---EGEKIPATFAGPSCDSLDIMFRGKMTEPLEVDDLLLVPVCGAYTS 356 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHI 400 + T+N ++ + + Sbjct: 357 ASATTFNGFKKARMVIWEDVRDEL 380 >gi|283458340|ref|YP_003362962.1| diaminopimelate decarboxylase [Rothia mucilaginosa DY-18] gi|283134377|dbj|BAI65142.1| diaminopimelate decarboxylase [Rothia mucilaginosa DY-18] Length = 506 Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 115/474 (24%), Positives = 186/474 (39%), Gaps = 62/474 (13%) Query: 2 SAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFS----NAFDGMDTMV- 55 +F E G L + V++ LA +TP Y +S T + AF V Sbjct: 29 DSFTRNEQGELCIDGVTVSDLAAEHETPQYVFSETTFRARARAYRTAFEQAFAEHGAQVS 88 Query: 56 -CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 YA K+ + AV + G LD S GEL AL A VP I G K+ E+ A Sbjct: 89 VYYAGKSFLSTAVARWATEEGLCLDTASGGELALALRAQVPGANIALHGNNKSEAELARA 148 Query: 115 LQSGIYCFNVESESELKTLN-----------QRAVSLGKKAPIAFRVNPDINANTHKKIS 163 +++G+ +S ELK + P+ R+ P ++A+TH+ I+ Sbjct: 149 IRNGLGRVVADSVDELKLIECVYAELAAERVAEGEEPYAPVPVLIRITPGVHASTHESIA 208 Query: 164 TGKKEDKFGIPIH------------------------QIHSLYAYASTLPGVKISGVDMH 199 T ++ KFG+ + A + + G+ H Sbjct: 209 TAHEDQKFGMSLQPGTAALAGLDEEELEHWGVESTDSYAALAAAILNATDSLDFRGIHCH 268 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-- 256 IGSQI + E F +A + + R G + +D+GGG GI Y P S ++ Sbjct: 269 IGSQIFEAEGFEQAATTALEFMNRLNRDLGVTLPELDLGGGYGIGYTEADHPRSITEVTE 328 Query: 257 -----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK---------SADKTFV 302 + + G + EPGR + G + V +IK + +V Sbjct: 329 SIAASVAATCERLGMAIPHMSFEPGRSISGPSGATLYTVGTIKNVSIEDENGEIRVRRYV 388 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPR 361 +D M+D RP LY++ + + N A + + +VG CE+GD + + + Sbjct: 389 SVDGGMSDNARPVLYESDY-SVTLANRAPAGEQVLSRVVGKHCESGDVVVRYCYLPADLQ 447 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQF-HIIRPRMTFQELIELD 414 GD+L + TGAY V YN P I + ++ R ++++ LD Sbjct: 448 AGDILAVPATGAYCYVLGSNYNFLTRPPVIATAEGKPSRVMIRRQREEDMLALD 501 >gi|13124043|sp|O50657|DCLO_SELRU RecName: Full=Lysine/ornithine decarboxylase; Short=LDC gi|2897824|dbj|BAA24923.1| lysine/ornithine decarboxylase [Selenomonas ruminantium] gi|28804806|dbj|BAC57940.1| lysine decarboxylase [Selenomonas ruminantium] Length = 393 Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 88/396 (22%), Positives = 152/396 (38%), Gaps = 24/396 (6%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F+ E ++ LA + TPF S +E+NY V YA+K Sbjct: 1 MKNFRLSEKE-------VKTLAKRIPTPFLVASLDKVEENYQFMRRHLPRAG--VFYAMK 51 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN ++ LA LGS D+ S GE+ V +++++ K + A + Sbjct: 52 ANPTPEILSLLAGLGSHFDVASAGEMEILHELGVDGSQMIYANPVKDARGLKAAADYNVR 111 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F + SE+ + + IA R N + KFG P+ + Sbjct: 112 RFTFDDPSEIDKMAKAVPGADVLVRIAVRNNKAL----------VDLNTKFGAPVEEALD 161 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L A G+ G+ H+GSQ ++ +A + R L + G ++ +D+GGG Sbjct: 162 LLKAAQD-AGLHAMGICFHVGSQSLSTAAYEEALLVARRLFDEAEEMGMHLTDLDIGGGF 220 Query: 241 GIAY-HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + + ++ A + EPGR++ LVT VI K ++ Sbjct: 221 PVPDAKGLNVDLAAMMEAINKQIDRLFPDTAVWTEPGRYMCGTAVNLVTSVIGTKTRGEQ 280 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + ILD + +YD Y ++ G + GP C+ D + + Sbjct: 281 PWYILDEGIYGCFSGIMYD---HWTYPLHCFGKGNKKPSTFGGPSCDGIDVLYRDFMAPE 337 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 + GD + + + G+Y +V + +N L P I+ Sbjct: 338 LKIGDKVLVTEMGSYTSVSATRFNGFYLAPTIIFED 373 >gi|134291178|ref|YP_001114947.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia vietnamiensis G4] gi|134134367|gb|ABO58692.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia vietnamiensis G4] Length = 402 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 106/406 (26%), Positives = 170/406 (41%), Gaps = 17/406 (4%) Query: 1 MS-AFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA 58 M+ F EG L V++ +LA TPF+ Y ++ + Y+ Sbjct: 1 MNAQFSEREGILTVGGVAINRLADRAGRTPFFVYDRATLDARVCMLRETLP-TGIDLHYS 59 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN AV+ LA G D+ S E+ AL A +PAE I F+G GK+ D++ A+ SG Sbjct: 60 VKANPLPAVVHHLAPQMDGFDVASANEMAVALNAGMPAELIGFAGPGKSRDDLRRAVASG 119 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + +L+ + LG + +A RVNPD + + G FG+ Q+ Sbjct: 120 VNIHLESVT-QLRLVTALGWELGVQPKVAIRVNPDFHVDHSGMRMGGGAS-PFGLDAEQV 177 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVG 237 L ++G + GSQ + A + DL +L Q+++ G Sbjct: 178 PELLRELDARDVT-LAGFHIFWGSQCLHAPTVIHAQRKSADLVVRLAGGLPVAPQYVNFG 236 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQY-----FGNLQCKIILEPGRFLVADVGILVTKVIS 292 GG GI Y + P + A +H + + +LE GR+LV + GI V ++I Sbjct: 237 GGFGIPYFAGETPLDLAAVADAMHDWLGVLRGRLPGTRTVLEFGRYLVGEAGIYVCRIID 296 Query: 293 IKKSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 K S D+TF+I D ++ + I N IVG +C Sbjct: 297 RKISRDRTFLITDGGLHHHLAASGNFGQILRRNFPVTIGNRQTQAPTERCHIVGCLCTPL 356 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 D IA + + + GD + + ++GAYG S + E++V Sbjct: 357 DRIADDVLLPEAQIGDFVVVFQSGAYGRSASPRNFLGHPDAIEMLV 402 >gi|300865977|ref|ZP_07110713.1| Diaminopimelate decarboxylase [Oscillatoria sp. PCC 6506] gi|300336043|emb|CBN55871.1| Diaminopimelate decarboxylase [Oscillatoria sp. PCC 6506] Length = 412 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 82/403 (20%), Positives = 155/403 (38%), Gaps = 18/403 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++L +P Y Y + + + + D +A N N A+++ + G GL Sbjct: 23 QELLSAYGSPLYVYQGDRLRQTLDRIARSIDYPQVQFHFASVTNGNIALLQLIQQAGWGL 82 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 + G++ L A ++RIV++G + +I L I FN +S S+L + Sbjct: 83 HANTPGDVFLGLKAGFTSDRIVYTGSNLSRVDIQQLLDWNINRFNFDSLSQLHDFCDCSR 142 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 S + + + T + + + G KI+G+ Sbjct: 143 SQARSIHSEIGLRLNSPELTGDSRIGVRPAEFDKA---------NAIAQQHGFKITGLHF 193 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL-GIAYHSDHRPPSSSDYA 257 + G+ + +F A + + QQL + + +D GGG A Sbjct: 194 YRGTGTNATSAFIDAIDRVVAIAQQL----PDWRSLDFGGGFGYPYRGGAAFDWREFGTA 249 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + ++++EPGR +A G+++ KV+S+K D+ V +D + + P ++ Sbjct: 250 ITQKLTARSHPIELVIEPGRAAIAGCGVMLAKVVSVKWQCDRQIVGVDTTVANLSVPAVH 309 Query: 318 DAYHEINYIVNP----AGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 Y I N R DI G + D++ N + + GD + I +GA Sbjct: 310 GGYRAIAVWENESSLGDSTRSRYQTDICGNTTYSRDYLGRNCWLPSLKIGDAIAILDSGA 369 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 YG S + R E+++ G+ +IR R + L+ Sbjct: 370 YGYAMSSHFLHRPRPAEVLIEGNHHRLIRQREDYSILLNGQIF 412 >gi|290960696|ref|YP_003491878.1| pyridoxal-dependent decarboxylase [Streptomyces scabiei 87.22] gi|260650222|emb|CBG73338.1| putative pyridoxal-dependent decarboxylase [Streptomyces scabiei 87.22] Length = 541 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 94/411 (22%), Positives = 163/411 (39%), Gaps = 22/411 (5%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 +++++ +L +P Y Y + A + V Y+LKANS+ ++ L Sbjct: 13 DDMTVRRLVEQYGSPLYVYDLARVRTALEDLRAALPQ-PSRVYYSLKANSHPDLVAELRR 71 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 G+ ++ S GEL AL A PA +++SG GK E+D A+ +G+ F+ ES +L + Sbjct: 72 GGARAEVTSRGELAAALEAGHPAAELMYSGPGKVPAELDEAIAAGMRTFSAESFGDLDRI 131 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 A + G A R+N A + +FG + + + A I Sbjct: 132 GAAADAHGVTADCVLRIN-AAGAPGEGGLRMTGGPSQFGFDLDDLTAHGARLLVKGVRII 190 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + + D+ + + +R G + +D+GGG Y + P+ Sbjct: 191 GMHFFPLTNARDEDGLLAELAQSVRTAASLRDELGIPLHLLDLGGGFAAPYATPGERPAY 250 Query: 254 SDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 S + + + + + E GR+LV D G LV+ V +K S T+ +LD Sbjct: 251 PGLRSALSAVLDESLPGWRDGEPVVAFESGRYLVGDCGRLVSTVTDVKNSRGNTYAVLDA 310 Query: 307 AMNDFMRPTLYDAYHEIN--------YIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 +N + ++ + GDR + GP+C D +A + Sbjct: 311 GINHLGGLSGLGRLLPLSARPLSGPGPATDEVGDREPAFVTLAGPLCTPADILARAADLP 370 Query: 359 LPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQF----HIIRPR 404 RPGDLL GAYG S + E++V+G + + R Sbjct: 371 GLRPGDLLAFPNVGAYGLSASLLGFLGHPAPAELVVDGGETVSAGRLALRR 421 >gi|119899537|ref|YP_934750.1| diaminopimelate decarboxylase [Azoarcus sp. BH72] gi|119671950|emb|CAL95864.1| probable diaminopimelate decarboxylase [Azoarcus sp. BH72] Length = 427 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 111/405 (27%), Positives = 181/405 (44%), Gaps = 16/405 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M+ F+ EG L V L +LA V TPFY Y + ++ A + + YA+ Sbjct: 27 MTQFRSAEGQLLVNGVPLTRLAVRVGQTPFYAYDRSLLDARVAQLRAALP-SEIKLHYAM 85 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN A++ + L G+D+ S GEL+ AL A + I F+G GK E+ A+ +GI Sbjct: 86 KANPMPALVGHMVRLVDGIDVASAGELQVALDAGADPKEISFAGPGKREQELLQAVAAGI 145 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 NVES EL L +LG A +A RVNPD + G + +FG+ + Sbjct: 146 L-INVESFRELPILAAAQDALGLPARVAVRVNPDFELKSSGMKMGGGPK-QFGVDAEDVP 203 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGG 238 L A G + GSQ + E+ +A + L +L + ++ +++GG Sbjct: 204 RLLAEIGNAGLA-FEGFHLFAGSQNLRPEAIVEAQQKSYALAVRLAEHAPTAVRFLNLGG 262 Query: 239 GLGIAYHSDHRPPSSSDY-----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 G GI Y P + A + + +I++E GR+LV + GI V +V+ Sbjct: 263 GFGIPYFPGETPLDLAPIGDNLGAIVAAARQQLPEAEIVIELGRYLVGEAGIYVARVVDK 322 Query: 294 KKSADKTFVILDVAMNDFMR----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S + +++ D ++ + + I N + +VGP+C D Sbjct: 323 KVSRGQIYLVTDGGLHHHLSASGNFGQVIRKNYPAAIGNRIEGSMRETVSVVGPLCTPLD 382 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 +A + PGDL+ + ++GAYGA S + + E++V Sbjct: 383 LLADKMSLPAAEPGDLVVVYQSGAYGASASPQRFLGHPAVAEVLV 427 >gi|258654007|ref|YP_003203163.1| Orn/DAP/Arg decarboxylase 2 [Nakamurella multipartita DSM 44233] gi|258557232|gb|ACV80174.1| Orn/DAP/Arg decarboxylase 2 [Nakamurella multipartita DSM 44233] Length = 508 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 102/406 (25%), Positives = 181/406 (44%), Gaps = 12/406 (2%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 LA TP + Y + ++ A + Y+LKAN N +V+ LA G+ Sbjct: 13 TALAARFGTPLFVYDAEVLAASFGELREALPPA-VEIFYSLKANPNVSVVGVLAAAGARA 71 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 ++ S ELR AL A + I+F G K+ +++ L +GIY ES EL L++ A Sbjct: 72 EVCSRAELRTALLAGIDPADIIFLGPSKSATDLEACLTAGIYAIVAESFDELGELDRIAR 131 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 S + + RVNP T +S G K +FGI Q+ + P + + G+ + Sbjct: 132 SRQVRPRVMLRVNPRRGT-TGAGLSMGGKPRQFGIDESQLEHCGSVPERFPQLDVCGIHV 190 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 ++G+++ F + + +L +++ G + +DVGGG+G+AY + P S Sbjct: 191 YLGTRLLDASLFTENVRATLELAERIAAVTGIRLAAVDVGGGVGVAYFAGESDPDLSGVR 250 Query: 258 SLIH-----QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 + + + + +++ E GRFL A G V +V ++K+S + F D + Sbjct: 251 AELEPLVASFRQRHPRVRLMCESGRFLAARAGEYVVRVGAVKQSMGQWFASTDGGTHHHQ 310 Query: 313 RPTLYDAYHEINYIV---NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + N+ V N + G +C D +A N ++ + GDL+ I Sbjct: 311 AAAGIGSVVPRNFPVRLLNRTSAAPAGAWQVTGSLCTPNDTLARNVELPQLQVGDLIGIG 370 Query: 370 KTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 ++GAY A S + S E++++ H++R R +L+ Sbjct: 371 RSGAYAASASPGRFLSHGYAAEVLLHDGDGHLVRRRDNPLDLLRGQ 416 >gi|154249371|ref|YP_001410196.1| Orn/DAP/Arg decarboxylase 2 [Fervidobacterium nodosum Rt17-B1] gi|154153307|gb|ABS60539.1| Orn/DAP/Arg decarboxylase 2 [Fervidobacterium nodosum Rt17-B1] Length = 393 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 89/380 (23%), Positives = 160/380 (42%), Gaps = 15/380 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L ++A TP I NY + V YA+K+NS+ ++K L +GS Sbjct: 4 LRQIAEKYGTPVLVMDLNVIANNYRQLIENI--NNCKVYYAVKSNSHIEIVKFLKDMGSH 61 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+ S GE+ + L+ V R+ F K I++I A + GI F V++E E++ + A Sbjct: 62 FDVASRGEIEKLLSIGVEPSRMSFGNTIKKIEDIKFAYEVGIRMFAVDAEMEIEKIALVA 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + I + N + + KFG ++ L YA G+ G+ Sbjct: 122 PNADIYVRI--------STNGMEGDADWPLTRKFGTSVNHAIELVRYAKE-KGLNPIGLS 172 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY-HSDHRPPSSSDY 256 H+GSQ E++ A + + ++ + G ++ I+ GGG+ + Y + Sbjct: 173 FHVGSQNYNPENWRTAIREASIVFEEAKQFGVEMKMINTGGGMPVRYVRDIPSIKKIAKV 232 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + + + +I+EPGR +V + G+++++VI K D+ ++ LD + + T Sbjct: 233 INEAVEEYLGNDITVIVEPGRSMVGNAGVMISRVILRSKKGDENWLYLDAGVFHGL--TE 290 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYG 375 V+ D + GP C++ D + + + GD++Y TGAY Sbjct: 291 TIQNIRYRITVDGKEDEELEKFVLAGPTCDSVDVMYYDAMLPKSTTLGDIVYFFATGAYT 350 Query: 376 AVQSGTYNSRLLIPEIMVNG 395 +N I NG Sbjct: 351 TEYGTNFNGIASPSIIFENG 370 >gi|229119086|ref|ZP_04248424.1| Decarboxylase [Bacillus cereus Rock1-3] gi|228664370|gb|EEL19873.1| Decarboxylase [Bacillus cereus Rock1-3] Length = 411 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 102/392 (26%), Positives = 167/392 (42%), Gaps = 13/392 (3%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 V L +P Y Y+ + K+Y N+ +++ Y+LKAN N + + L +LG Sbjct: 2 VDYNCLVEEYGSPLYVYNLAELTKSYQKLINSLPD-KSIIYYSLKANPNPEITRHLINLG 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +I S GEL L P E +++G GKT EI AL + F+VES +EL+ +N Sbjct: 61 CYAEISSIGELDTVLDVGGPPEHCLYTGPGKTKKEIQYALSKNVSHFSVESFNELEIIND 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + K I R+NP N TG + +KI+G Sbjct: 121 LTKNHSKLINITLRINPSFNVGNASIKMTGIPSQFGFDEECLNSDIIKLFKGNKNLKING 180 Query: 196 VDMHIGSQIDQIES-FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 ++ GS + I+ +L + +I+ ID GGG + D P Sbjct: 181 FHIYNGSNFNNIDILVENYTNILETILNLKNKLSIDIEFIDFGGGFAAPFGKDLDLPDYK 240 Query: 255 DY-----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + A L + N + I E GR+L A G L+ V S+K+S + + I+D +N Sbjct: 241 ELKDSLEALLNKHFKDNHRPTIAFESGRYLTATCGCLIGTVQSVKESKGRKYCIVDFGIN 300 Query: 310 D-----FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 +R + ++ + IVGP+C D++A N ++ +PGD Sbjct: 301 HLGGMSGLRRIPTIELNIFKLNISVEDNAKVETVTIVGPLCTPLDYLAKNVSVSKLQPGD 360 Query: 365 LLYIEKTGAYGAVQS-GTYNSRLLIPEIMVNG 395 ++++ GAYG S + SR + EI++ Sbjct: 361 VVFVPNVGAYGLTASLIAFLSREIPKEIIIKN 392 >gi|54297723|ref|YP_124092.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella pneumophila str. Paris] gi|53751508|emb|CAH12926.1| hypothetical protein lpp1774 [Legionella pneumophila str. Paris] Length = 859 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 117/371 (31%), Positives = 174/371 (46%), Gaps = 16/371 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 +P Y Y + +A + +D+ + YA+KAN +++KTL G G + VS EL Sbjct: 502 SPCYVYHSPTQATRARQL-SALESIDS-LFYAIKANPFPSILKTLEKEGIGFECVSIQEL 559 Query: 87 RRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 L ERI+F+ E + ALQ+G Y + L K Sbjct: 560 ELVLKLFPNIKKERILFTPNFAPKSEYEFALQTGCYVTIDSL-----YPLENWPKLFKDR 614 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R++P A HK +STG E KFGI S + +K+ G+ H GS I Sbjct: 615 EVIVRIDPGTGAGHHKHVSTGGNESKFGIT-QNDISKILSHTKANHIKVIGLHAHSGSGI 673 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQY 263 + + + +L LT Q ++ I++GGGLGI P + A L+ Sbjct: 674 LSTDLWQQTAVMLASLTDQF----PEVRSINLGGGLGIVEKPGQHPIDFAALDAQLMAVK 729 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 I LEPGRF VA+ G+++ KV K+ F+ ++ MN +RP+LY AYHEI Sbjct: 730 SQYPGLAIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEI 789 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + ++ A IVGPICE+GD + +R + + R GD++ I TGAYG S YN Sbjct: 790 INLTRLHEEKAGF-AHIVGPICESGDTLGYDRLLPVTREGDVILIANTGAYGHCMSSHYN 848 Query: 384 SRLLIPEIMVN 394 R EI++ Sbjct: 849 LRPPAQEIVLE 859 >gi|293394650|ref|ZP_06638942.1| diaminopimelate decarboxylase [Serratia odorifera DSM 4582] gi|291422776|gb|EFE96013.1| diaminopimelate decarboxylase [Serratia odorifera DSM 4582] Length = 354 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 95/362 (26%), Positives = 150/362 (41%), Gaps = 24/362 (6%) Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + G +D VS GE+ RAL A T D +D A + + + + Sbjct: 1 MRQQGVKVDSVSLGEVERALQAGYQPGGDEI---VFTADVLDHATLARVSELKIPVNAGS 57 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + ++ P+ R+NP +K +TG + K GI + Sbjct: 58 IDMLEQLGQCSAGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPKAVE-----KI 112 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + I + ++ + QQ+ G +I I GGGL I Y Sbjct: 113 QRYGLTLLGVHMHIGSGVDYQHLERVCDAMVQQVIDLGQDIAAISAGGGLSIPYQHGEEA 172 Query: 251 PSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + Y L + + +EPGRFL+A+ G+LV +V ++K + FV++ Sbjct: 173 IDTEHYFGLWDRARQRIAAHLGHPVALEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLV 232 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH---ADIVGPICETGDFIALN------- 354 D ND MRP +Y +YH I+ + D I GP+CE+GD Sbjct: 233 DAGFNDLMRPAMYGSYHHISLLPADGRDTAGQPLRDTVIAGPLCESGDVFTQQAGGGVET 292 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 R + + GD L TGAYG+ S YNSR L+PE++ + +IR R T ELI L+ Sbjct: 293 RALPAVQVGDYLVFHDTGAYGSSMSSNYNSRPLLPEVLFENGEARLIRRRQTIDELIALE 352 Query: 415 SI 416 + Sbjct: 353 RV 354 >gi|239944440|ref|ZP_04696377.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 15998] gi|239990897|ref|ZP_04711561.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 11379] gi|291447906|ref|ZP_06587296.1| orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 15998] gi|291350853|gb|EFE77757.1| orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 15998] Length = 434 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 110/436 (25%), Positives = 189/436 (43%), Gaps = 23/436 (5%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 + + + E LA TP Y Y + +A V Y+LK+N N +V + Sbjct: 1 MRIQGIEYEDLAGRFGTPLYVYDGEVLTDTVTELRSAL-HPALEVFYSLKSNPNISVFRV 59 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G+ ++ S ELR ALAA E ++F G GK+ +E+ L G+Y VES EL Sbjct: 60 LRRGGARAEVSSLVELRTALAAGAKPEDVIFLGPGKSAEELGACLDVGVYAVVVESFDEL 119 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 L + A G + + R+NP A + +++ G K +FGI + S Sbjct: 120 DHLERLAGDRGVRQRVLLRINPAC-AISGSRLTMGGKPRQFGIDEKAVLDAGDLPSRYRH 178 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHR 249 ++G+ +++G++I E K DL +++ RS G + +D+GGG+G+AY Sbjct: 179 ADVAGIHVYMGTRILDAEVLGKNTAYALDLAERVVRSTGIRLDAVDIGGGMGVAYFDGES 238 Query: 250 PPSSSDYA-----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 +D + + ++ILE GRFL A G V V +K+S ++F + Sbjct: 239 DLDLADVVKELNPRIEKFATAHPGTRLILESGRFLSARAGTYVLGVRYVKESLGESFAVA 298 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD--------IVGPICETGDFIALNRK 356 D + M ++ + N+ G + GP+C D + + Sbjct: 299 DGGTHHHMAAVGIGSFVKRNFPAVLLGRDGEERTRTGPISPQNVTGPLCTPNDTLLKQAQ 358 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + RPGDL+ + ++GAYG S + S E++V + H++R R +L+ Sbjct: 359 LPDLRPGDLIGVARSGAYGPTASPGLFLSHGYPAEVLVTEGRAHLVRSRDEPDDLMRKQH 418 Query: 416 I------PAWLQKTPK 425 + P + + Sbjct: 419 LYDQPSTPDHALEETQ 434 >gi|255658079|ref|ZP_05403488.1| lysine/ornithine decarboxylase [Mitsuokella multacida DSM 20544] gi|260849844|gb|EEX69851.1| lysine/ornithine decarboxylase [Mitsuokella multacida DSM 20544] Length = 399 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 93/410 (22%), Positives = 154/410 (37%), Gaps = 25/410 (6%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M +F E + +LA TPF S + +NY + YA+K Sbjct: 1 MRSFILNENEM-------NELAKRQPTPFLVLSVDKVAENYAFLRKHLPRAG--IYYAIK 51 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN + ++ LA LGS D+ S GE+ AA V R++++ A + G+ Sbjct: 52 ANPHPRALERLAALGSHFDVASAGEMEMLHAAGVDGSRMIYANPVHDARGFAAASRFGVK 111 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F + ESE+ L A + + + KFG P+ Sbjct: 112 RFTFDDESEIPKLAAAAPGADVLVRVQVHNSKAL----------VDLNTKFGAPLGSALP 161 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L A G+ G+ H+GSQ ++ +A L+ L + ++G ++ +D+GGG Sbjct: 162 LLRKAEQ-AGLHAKGICFHVGSQSLSTAAYEEALLLVHHLFLEAEASGMHLTDLDIGGGF 220 Query: 241 GIAYHSDHRPPSSSDY-ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 I ++ A Q + EPGRFL LVT VI K+ Sbjct: 221 PIPSAEGLHVDLAAMLEAINRQLERLFPQTAVWTEPGRFLCGTAMNLVTSVIGTKQRGTF 280 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + ILD + L+D Y ++ G+ + GP C+ D + + Sbjct: 281 PWYILDEGIYGVFSGILFD---HWTYPLHCFGNGAKTPSVFAGPSCDGIDVLYRDFPAPK 337 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 G + + GAY V + +N ++V Q ++ R +E Sbjct: 338 LPIGANVLVSDIGAYTTVSATRFNGF-EPAAVLVWEDQADLVAKRRKLRE 386 >gi|282896355|ref|ZP_06304377.1| Diaminopimelate decarboxylase [Raphidiopsis brookii D9] gi|281198851|gb|EFA73730.1| Diaminopimelate decarboxylase [Raphidiopsis brookii D9] Length = 396 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 94/400 (23%), Positives = 167/400 (41%), Gaps = 10/400 (2%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +P Y Y + + + + +F +T +A N N A++K + GL Sbjct: 3 EELLGTYGSPLYVYDSDILNQTIAHITKSFKYPETRFYFATVTNGNIALLKVFKNAHWGL 62 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 + G++ L+A + I++SG +EI+ L G+ N++S ++++ L + Sbjct: 63 HANTPGDIYLGLSAGFAPDSIIYSGTNLNREEIEQVLSWGVTTLNLDSLAQVQLLCEVCS 122 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV-KISGVD 197 SL A +N N + I + A A +ISG+ Sbjct: 123 SLKNTAGKGKNLNTFSRLNQLDIGLRLNVGGESRIGVRLQDFNTAIAIAKNVGLEISGLH 182 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + G+ + ++F A + N + ++ID GGG G Y+ + Sbjct: 183 FYRGTGTNATKAFTDAIDEVLVA----AQNLPHWKYIDFGGGFGYPYNHQGIAFDWELFG 238 Query: 258 SLIHQYFGN--LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 I Q N K+I+EPGR +A G L+ KV+S+K +K + +D + + P+ Sbjct: 239 GEIIQRISNLDRTIKLIIEPGRAAIASCGTLLAKVVSVKWQDNKQILGVDSTVGNIAVPS 298 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 +Y Y EI N + DI G + D++ N ++ GD++ I GAYG Sbjct: 299 VYGGYREIISWKNHS---PKYITDICGNTTYSRDYLGKNCQLPSLEMGDIIGILDVGAYG 355 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 S + R E+++ SQ +IR R + L+ Sbjct: 356 YAMSSHFLHRPKPGEVLLENSQHRLIRNREDYSVLLTNQI 395 >gi|325981750|ref|YP_004294152.1| Ornithine decarboxylase [Nitrosomonas sp. AL212] gi|325531269|gb|ADZ25990.1| Ornithine decarboxylase [Nitrosomonas sp. AL212] Length = 391 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 89/379 (23%), Positives = 146/379 (38%), Gaps = 19/379 (5%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 L+ E+V E L Q PF +T I + F A YA+KAN + V+ Sbjct: 26 LNFEHVQ-ETLNKGYQRPFLLVDSTIIRRKAQRFIAAMPR--VHPHYAVKANPDARVLSA 82 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G +I S EL L VPA I +S K+ I+ A G+ + ++S EL Sbjct: 83 LIDEGVGFEIASIAELDLLLKLGVPAAEIFYSNPMKSRAYIEYAAAKGVEWYVLDSIEEL 142 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + I T S KFG + I+ + A L Sbjct: 143 RKIVSVKPDAKMYLRID----------TPNIGSDWPLAGKFGTHLADINEIIHEAVRLK- 191 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++GV H+GSQ +++ + + + ++R G N + ++VGGG + + Sbjct: 192 ADLAGVTFHVGSQCRNPQNWRVGIERAKKVFAEMRRVGLNPRLLNVGGGYPVRHIKPIPS 251 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 +++ EPGR+LV+D V +V+ K ++ D M Sbjct: 252 IEIIAEVINEAIADLPESIRVMAEPGRYLVSDSAYFVCRVVGTATRNGKRWMYWDAGMFG 311 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIE 369 + +EI + +I I GP C++ D + + + GD +YI Sbjct: 312 GVIEMTEGLRYEIL----TDREGNNIPWSIAGPTCDSVDILMHELMLPNNMQEGDFIYIP 367 Query: 370 KTGAYGAVQSGTYNSRLLI 388 GAY + +N L Sbjct: 368 NAGAYTTAYASNFNGFPLP 386 >gi|330823348|ref|YP_004386651.1| pyridoxal-dependent decarboxylase [Alicycliphilus denitrificans K601] gi|329308720|gb|AEB83135.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Alicycliphilus denitrificans K601] Length = 401 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 110/405 (27%), Positives = 180/405 (44%), Gaps = 16/405 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F L + L LA V TPFY Y + I ++ YA+ Sbjct: 1 MDQFDTTHDELRVGGLPLSLLAERVGQTPFYAYDRSLIAARVAGVRQVLPQ-GVLLHYAI 59 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN A++ + L G+D+ S GEL+ AL A + I F+G GK E+ A+ +G+ Sbjct: 60 KANPMPALVGFMRPLVDGMDVASAGELKLALDAGADPQTIGFAGPGKRDAELRQAVAAGV 119 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 + EL+ L A +LG+ A +A R+NPD G + FGI Q+ Sbjct: 120 LLHVESAR-ELEALAASAQALGRPARVALRINPDFELRGAGMHMGGGPK-PFGIDAEQVP 177 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGG 238 ++ A G+ G ++ GSQ + ++ +L Q+L + ++++++GG Sbjct: 178 AMLR-AMARDGLAFEGFHIYPGSQNLRGNVIAESLHRSVELVQRLAHDAPAPVRYVNLGG 236 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGN-----LQCKIILEPGRFLVADVGILVTKVISI 293 G GI Y + R A + Q + +++LE GR+LV + GI V +VI Sbjct: 237 GWGIPYVAGERRLELPPVADALAQVQAALGRALPEAQMVLELGRYLVGEAGIYVARVIDR 296 Query: 294 KKSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S + F++ D M+ + I N A +VGP+C D Sbjct: 297 KVSRGQVFLVTDGGMHQHLAASGNFGQVIRRNYPVVIGNRLQAAERESATVVGPLCTPLD 356 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 +A ++A+ +PGDL+ + ++GAYGA S + E++V Sbjct: 357 VLAERMELAVAQPGDLVVVLQSGAYGATASPQAFLGHPPCAEVLV 401 >gi|28838469|gb|AAH47954.1| MGC52527 protein [Xenopus laevis] Length = 456 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 89/377 (23%), Positives = 149/377 (39%), Gaps = 28/377 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L F A + YA+K NS++ V+K LA LG+G D S+ E+ Sbjct: 39 FFVADLGDVVRKHLRFLKALPRVKP--FYAVKCNSSKGVVKILAELGAGFDCASKTEIEL 96 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V ERI+++ K I +I A ++G+ ++E EL +++ + IA Sbjct: 97 VQDIGVAPERIIYANPCKQISQIKYAAKNGVQMMTFDNEVELSKVSRSHPNARMVLRIA- 155 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S+ + KFG P+ L A L + GV H+GS + Sbjct: 156 ---------TDDSKSSARLSVKFGAPLKSCRRLLEMAKNLSV-DVIGVSFHVGSGCTDSK 205 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ +A R + + G+ + +D+GGG S R + + + + Sbjct: 206 AYTQAISDARLVFEMASEFGYKMWLLDIGGGFPGTEDSKIRFEEIAGVINPALDMYFPES 265 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADK-------------TFVILDVAMNDFMR 313 +II EPGR+ VA L VI+ K+ + + D F Sbjct: 266 SDVQIIAEPGRYYVASAFSLAVNVIAKKEVEHSVSDDEENESSKSIMYYVNDGVYGSFNC 325 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 A+ + P+ D+ + + GP C+ D IA ++ GD L E GA Sbjct: 326 LVFDHAHPKPILHKKPSPDQPLYTSSLWGPTCDGLDQIAERVQLPELHVGDWLLFENMGA 385 Query: 374 YGAVQSGTYNSRLLIPE 390 Y S +N P Sbjct: 386 YTIAASSNFNGFQQSPV 402 >gi|284043639|ref|YP_003393979.1| diaminopimelate decarboxylase [Conexibacter woesei DSM 14684] gi|283947860|gb|ADB50604.1| Diaminopimelate decarboxylase [Conexibacter woesei DSM 14684] Length = 475 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 88/462 (19%), Positives = 161/462 (34%), Gaps = 38/462 (8%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNA----FDGMDTMVCY 57 +G L E + ++L +P + S A+ A + +V Sbjct: 15 DLLTRVDGRLAIEGLRADELVARFGSPLFVVSEPALRARARRVQAAFAAAWPEGPVVVLP 74 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+KA++ A+ + LA G G D+ EL A+ A +RI +G K I+ A+ Sbjct: 75 AVKASTVVALHRVLAQEGCGADLYGGAELEIAVRAGTDPDRISVNGTAKDRPTIERAIAL 134 Query: 118 GIYCFNVESES-ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK------ 170 G + E+ RA+ + + R ++A + + Sbjct: 135 GARITIDDVHEVEIARDAARALGRPARLRVRLRPEILLDAPSDGNAMIAATDGSVLRIKD 194 Query: 171 -----FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + + P +++ GV MH + L +L Sbjct: 195 AYGRYKPGVPFDDMARIGRSLDAPEIEMIGVHMHFPRHTTDLGVIGHVADRYAALIAELS 254 Query: 226 SNG--HNIQHIDVGGGLGIAYHS---------DHRPPSSSDYASLIHQY---------FG 265 + IDVGGG PP YAS I ++ Sbjct: 255 ELWDGWTPRQIDVGGGFAPPGDPFGRRNPSFAHRTPPPIEAYASTIAEHLRTGLARHGID 314 Query: 266 NLQCKIILEPGRFLVADVGILVTKV-ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 ++ +EPGR L VG+ + V +++ ++ P + + + Sbjct: 315 TAGRQLEVEPGRSLFGPVGVHLATVLNVKRQTRPFPHAWVETDTTQHFLPGVGQEWDDFP 374 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 + + AD+VG C GD +A + + P GD+L TGAY + +N+ Sbjct: 375 VAFDRVAGDGELTADVVGRSCM-GDVLASDAPVPAPVRGDVLAFASTGAYQETSASNFNA 433 Query: 385 RLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQKTPKQ 426 ++V+ Q H++R T +++ D++PA L + Sbjct: 434 LPRPATVLVDSGQAHLVRRAETVDDVLGRDALPAHLAAEAAR 475 >gi|54294698|ref|YP_127113.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella pneumophila str. Lens] gi|53754530|emb|CAH16014.1| hypothetical protein lpl1775 [Legionella pneumophila str. Lens] Length = 859 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 116/371 (31%), Positives = 174/371 (46%), Gaps = 16/371 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 +P Y Y + +A + +D+ + YA+KAN +++KTL G G + VS EL Sbjct: 502 SPCYVYHSPTQAIRARQL-SALESIDS-LFYAVKANPFPSILKTLEKEGIGFECVSIQEL 559 Query: 87 RRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 L ERI+F+ E + ALQ+G Y + L K Sbjct: 560 ELVLKLFPNIKKERILFTPNFAPKSEYEFALQTGCYVTIDSL-----YPLENWPELFKNR 614 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R++P A HK +STG E KFGI S + +K+ G+ H GS I Sbjct: 615 EVIVRIDPGTGAGHHKHVSTGGNESKFGIT-QNDISKILSLTKSNHIKVIGLHAHSGSGI 673 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQY 263 + + + +L LT Q ++ I++GGGLGI P + A L+ Sbjct: 674 LSTDLWQQTAVMLASLTDQF----PEVRSINLGGGLGIVEKPGQHPIDFAALDAQLMAVK 729 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 I LEPGRF VA+ G+++ KV K+ F+ ++ MN +RP+LY AYHEI Sbjct: 730 SQYPGLAIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEI 789 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + ++ A IVGPICE+GD + +R + + + GD++ I TGAYG S YN Sbjct: 790 VNLTRLHEEKAGF-AHIVGPICESGDTLGYDRLLPVTKEGDVILIANTGAYGHCMSSHYN 848 Query: 384 SRLLIPEIMVN 394 R EI++ Sbjct: 849 LRPPAQEIVLE 859 >gi|148230687|ref|NP_001079692.1| ornithine decarboxylase 2 [Xenopus laevis] gi|24636815|sp|Q9I8S4|DCOR2_XENLA RecName: Full=Ornithine decarboxylase 2; Short=ODC 2; Short=xODC2 gi|9653274|gb|AAF27628.2|AF217544_1 ornithine decarboxylase-2 [Xenopus laevis] Length = 456 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 89/377 (23%), Positives = 149/377 (39%), Gaps = 28/377 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L F A + YA+K NS++ V+K LA LG+G D S+ E+ Sbjct: 39 FFVADLGDVVRKHLRFLKALPRVKP--FYAVKCNSSKGVVKILAELGAGFDCASKTEIEL 96 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V ERI+++ K I +I A ++G+ ++E EL +++ + IA Sbjct: 97 VQDVGVAPERIIYANPCKQISQIKYAAKNGVQMMTFDNEVELSKVSRSHPNARMVLRIA- 155 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S+ + KFG P+ L A L + GV H+GS + Sbjct: 156 ---------TDDSKSSARLSVKFGAPLKSCRRLLEMAKNLSV-DVIGVSFHVGSGCTDSK 205 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ +A R + + G+ + +D+GGG S R + + + + Sbjct: 206 AYTQAISDARLVFEMASEFGYKMWLLDIGGGFPGTEDSKIRFEEIAGVINPALDMYFPES 265 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADK-------------TFVILDVAMNDFMR 313 +II EPGR+ VA L VI+ K+ + + D F Sbjct: 266 SDVQIIAEPGRYYVASAFSLAVNVIAKKEVEHSVSDDEENESSKSIMYYVNDGVYGSFNC 325 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 A+ + P+ D+ + + GP C+ D IA ++ GD L E GA Sbjct: 326 LVFDHAHPKPILHKKPSPDQPLYTSSLWGPTCDGLDQIAERVQLPELHVGDWLLFENMGA 385 Query: 374 YGAVQSGTYNSRLLIPE 390 Y S +N P Sbjct: 386 YTIAASSNFNGFQQSPV 402 >gi|320534481|ref|ZP_08034951.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 171 str. F0337] gi|320133312|gb|EFW25790.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 171 str. F0337] Length = 486 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 97/450 (21%), Positives = 176/450 (39%), Gaps = 43/450 (9%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--------MDTMVCYAL 59 +G L +++ ++ +P + + ++S A YA Sbjct: 36 DGELALGGLTVSEILADAPSPVFVLDEADLRGRAASWSAAMAEEFWPNYGMAGGEAFYAG 95 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELR---------RALAAPVPAERIVFSGVGKTIDE 110 KA V + + G G+D S EL A A R+ G GKT E Sbjct: 96 KAFLATKVAQWVLEEGMGIDTASRVELAVGLAGLEKVDGYEATTRARRLGLHGNGKTPAE 155 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVS--------LGKKAPIAFRVNPDINANTHKKI 162 + A++ + ++S E+ ++A + R+ I+A H+ I Sbjct: 156 VTTAVRHRVGHLVIDSPEEVDYAVAAVHELRRSGDFGPAERARVMVRLTTGIHAGGHEYI 215 Query: 163 STGKKEDKFGIPIHQ--IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL 220 ST ++ KFG+ + ++++G+ HIGSQI + F +A ++ L Sbjct: 216 STAHEDQKFGLSVSTGAARRTIDAIMAAEELELAGLHSHIGSQILDLAGFREAVGVVLGL 275 Query: 221 TQQLR-SNGHNIQHIDVGGGLGIAYHSDHRP-PSSSDYASLIHQYFGNLQ-------CKI 271 ++ GH ID+GGG GIAY PS + A + + + Sbjct: 276 RHEIAVDTGHLCPEIDLGGGYGIAYTGADPVAPSPAQVARALAEAVRETCERLGDEVPTV 335 Query: 272 ILEPGRFLVADVGILVTKVISIKKSA-----DKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +EPGR + + + V +K+ + +V +D M+D +RP LY+A + Sbjct: 336 SIEPGRAVAGPTTVTLYTVTGLKRVELGAGASRLYVSIDGGMSDNIRPALYEAAYTALVA 395 Query: 327 VNPAGDRL-HIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNS 384 + + + +VG CE+GD + + + GD+L + TGAYG + +YN Sbjct: 396 NRRPDPQAGLVRSRVVGKHCESGDVVVRDVDLPTDLAVGDVLAVPATGAYGRSMASSYNL 455 Query: 385 RLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 V + + T ++L+ L+ Sbjct: 456 FTRPGVRWVLEGESGWVLRPETIEDLLRLE 485 >gi|332524864|ref|ZP_08401053.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2] gi|332108162|gb|EGJ09386.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2] Length = 415 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 109/405 (26%), Positives = 172/405 (42%), Gaps = 16/405 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F +G L L LA V TPFY + + A + YA+ Sbjct: 15 MDQFPVRDGELVVGGERLSLLAARVGATPFYAVDRGLLRRRVAELRAALP-AGVKLHYAM 73 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN A++ +A L G+D+ S GEL+ AL A A + F+G GK E+ A+ + Sbjct: 74 KANPMPALVAFMAGLVDGIDVASGGELKVALDAGADAAEVSFAGPGKRDAELRQAVAA-R 132 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 NVESE EL L A G A +A RVNPD G + +FG+ ++ Sbjct: 133 VLVNVESERELAVLAAAAAEFGVPARVAVRVNPDFELKGSGMRMGGGAK-QFGVDADRVP 191 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGG 238 +L A L G + GSQ + E+ +A + +L +L ++ + +++GG Sbjct: 192 ALLARIGELGLA-FEGFHLFAGSQNLRAEAICEAQRQSYELALRLAAHAPAPLRFLNLGG 250 Query: 239 GLGIAYHSDHRPPSSSDY-----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 G GI Y + A + +++E GR+ V + G+ VT+V+ Sbjct: 251 GFGIPYFPGETRLDLAPIGANLQALAERARTELPEASLVIELGRYFVGEAGVYVTRVVDR 310 Query: 294 KKSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S + F++ D +N + + N GD A VGP+C D Sbjct: 311 KLSRGQVFLVCDGGLNHHLAASGNFGQVVRKNYPVTVGNRLGDEARETATAVGPLCTPLD 370 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 +A + GDL+ + ++GAYGA S + + E++V Sbjct: 371 LLADRMSLPPADVGDLVVVFQSGAYGASASPQAFLGHAPVTEVLV 415 >gi|82703782|ref|YP_413348.1| Orn/DAP/Arg decarboxylase 2 [Nitrosospira multiformis ATCC 25196] gi|82411847|gb|ABB75956.1| Orn/DAP/Arg decarboxylase 2 [Nitrosospira multiformis ATCC 25196] Length = 410 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 101/403 (25%), Positives = 178/403 (44%), Gaps = 16/403 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 F + L + L +LA TPFY Y + + + YA+KA Sbjct: 12 QFSVNDDCLEIGGLPLTRLAQRAGKTPFYAYDRQRLTDRVAFLRQHLP-AEIHLHYAMKA 70 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N AV++ +A L GLD+ S GE++ AL P+P I F+G GK+ E+ A+ +GI Sbjct: 71 NPMPAVVQHMARLVDGLDVASAGEMKVALDTPMPPGEISFAGPGKSDSELSCAIAAGIV- 129 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 N+ESE E++ + LG + +A RVNPD + G + +FG+ ++ ++ Sbjct: 130 LNMESEQEMERIAILGEYLGVRPKVAVRVNPDFELKSSSMKMGGGPK-QFGVDAERVPAM 188 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD-LTQQLRSNGHNIQHIDVGGGL 240 A L G + GSQ ++ + +A + + ++ +++GGG Sbjct: 189 LARLGRLAL-DFEGFHIFSGSQNLRVAALQEAHEKTFQLGIALAKHAPAPVRMLNIGGGF 247 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQC-----KIILEPGRFLVADVGILVTKVISIKK 295 G Y + + + ++ +I++E GR+LVA+ GI V +V+ K+ Sbjct: 248 GTPYFPGDEALDLAAVGENLRRLIPGVRQALPEARIVIELGRYLVAEAGIYVCRVLERKE 307 Query: 296 SADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 S + F+I D ++ + + N +VGP+C D + Sbjct: 308 SRGQIFLITDGGLHHHLAASGNFGQVIRKNYPVMVGNRVQGTDREVVSVVGPLCTPLDLL 367 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 A +++ GDL+ + ++GAYG S T + S E++V Sbjct: 368 ADRMEMSRAEAGDLIVVFQSGAYGLTASPTAFLSHPPPMEMLV 410 >gi|254497522|ref|ZP_05110314.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella drancourtii LLAP12] gi|254353239|gb|EET11982.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella drancourtii LLAP12] Length = 853 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 170/371 (45%), Gaps = 16/371 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 +P Y Y + A + +D + YA+KAN ++++TL G G + VS EL Sbjct: 496 SPCYVYHSPTQAARAQQLL-ALESID-TLFYAIKANPYPSILQTLEKEGVGFECVSIQEL 553 Query: 87 RR--ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 R L + +RI+F+ E + AL G + + L K Sbjct: 554 DRILELFPNIDKQRILFTPNFAPKTEYEYALNIGCFITIDSL-----YPLEHWPQLFKNR 608 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R++P A HK +ST E KFGI + + + A K + + + + Sbjct: 609 EVIVRIDPGAGAGHHKHVSTAGNESKFGITQNDLAQVIAL-----TKKNNIHVIGLHAHS 663 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQY 263 + ++ + L + +++I++GGGLGI +P ++ A L+ Sbjct: 664 GSGILTPELWQQTASMLASLTEHFPEVKYINLGGGLGIVEKPGQQPLDFANLDALLMAVK 723 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +I LEPGRF VA+ G+++ KV K+ F+ ++ MN +RP+LY AYHEI Sbjct: 724 SRYPHLEIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEI 783 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + ++ + IVGPICE+GD + +R + + GD+L I GAYG S YN Sbjct: 784 VNLSRLHEEKAGF-SHIVGPICESGDTLGYDRLLPVTEEGDVLLIANAGAYGRCMSSHYN 842 Query: 384 SRLLIPEIMVN 394 R EI+++ Sbjct: 843 LRPPAEEIVLD 853 >gi|325295056|ref|YP_004281570.1| diaminopimelate decarboxylase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065504|gb|ADY73511.1| Diaminopimelate decarboxylase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 451 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 88/444 (19%), Positives = 163/444 (36%), Gaps = 35/444 (7%) Query: 1 MSAF-----KYFEG-SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMD 52 M+ F Y + E V +EKL +P + +S + + + NAF + Sbjct: 18 MNKFGKFSSVYRKKVRKEIEGVPIEKLVEKFGSPLFVFSERKLRQKFREIKNAFTLRYPN 77 Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 ++ K N A+ L G ++VSE E +A V +I+++G K I+ + Sbjct: 78 VEFSWSYKTNYLDAICAILHSEGETAEVVSEFEYEKARKLGVEGNQIIYNGPYKPIESLR 137 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +A G N++ E+ L Q A LG K R+N D + E+ Sbjct: 138 VAAAEGAR-INIDHFEEIADLEQVADELGVKVKAGIRLNMDTGIHPQWTRFGFNLENGQA 196 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 ++ ++++G+ HIG+ I + +++ + + + ++ Sbjct: 197 WD------AVKRIASGGKIELNGLHCHIGTFILEPKAYENEVRKMVEFAYKIEDEFGFKV 250 Query: 233 HIDVGGGLGI--------AYHSDHRPPSSSDYASLIHQ-----YFGNLQCKIILEPGRFL 279 GG D PS ++A + K+I+E GR + Sbjct: 251 EYIDIGGGFPSKNRLRGIYLPPDVSVPSIDEFAERVCNTLLSSLRPGDYPKLIVESGRAI 310 Query: 280 VADVGILVTKVIS-IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 V + G L+T V + + K +LD +N Y EI+ V L Sbjct: 311 VDEAGFLITTVHAAKRMPDGKRAYVLDAGVNILFTAFWYHFNIEIDREVQ----GLTEPC 366 Query: 339 DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQ 397 + GP+C D + + G L I GAY Q + R +++ + + Sbjct: 367 ILYGPLCMNIDVVDDLVYLPPLPRGTRLVISPVGAYNVTQWMQFI-RYKPAVVLIGDNGE 425 Query: 398 FHIIRPRMTFQELIELDSIPAWLQ 421 +IR ++ + +P L+ Sbjct: 426 IDVIREAEDLSDITGREKLPERLR 449 >gi|157363014|ref|YP_001469781.1| ornithine decarboxylase [Thermotoga lettingae TMO] gi|157313618|gb|ABV32717.1| Ornithine decarboxylase [Thermotoga lettingae TMO] Length = 376 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 95/383 (24%), Positives = 163/383 (42%), Gaps = 20/383 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 ++K A +TPF IE+NY + A D + YA+KANS+ +++ L LGS Sbjct: 7 VKKAARTFETPFLIIDLDIIEENYRKLAAAIP--DCKIFYAIKANSHPRILERLRDLGSN 64 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+ S GE+++ + V A+R++F+ K +I A G+Y F +S EL + + A Sbjct: 65 FDVASIGEIKKLMNLGVTADRMIFANPIKREKDIAEAYDLGVYLFAADSTMELDKIAENA 124 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 +A S KFG+ + L AYA L + GV Sbjct: 125 PGSQVVIRVAVE----------NTHSDWPLSRKFGVDLLVAVDLIAYAQKL-RLTPVGVS 173 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAY---HSDHRPPSS 253 H+GSQ S+ A + + + R+ G +++ +D+GGG+ I + Sbjct: 174 FHVGSQNYDPHSWSNAIERVAKIFYWAERNFGIHLRVLDIGGGIPIKHVKPIPTVEEIGE 233 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 S+ +G +I EPGR +V + GILV+KV+ + + +V +D + + Sbjct: 234 IVLQSISEHLYGVRNLQIFAEPGRSMVGNSGILVSKVLLRCQRGSEEWVYIDAGVFHGLM 293 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 T+ + +EI I + GP C++ D I + ++ D++Y G Sbjct: 294 ETIENFRYEIEVDGK--ESEQKIPFVLAGPTCDSVDKIYDDALLSYNITLDDIVYFINAG 351 Query: 373 AYGAVQSGTYNSRLLIPEIMVNG 395 AY +N + Sbjct: 352 AYTVEYGTNFNGIPSPKVYFLQD 374 >gi|319761484|ref|YP_004125421.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Alicycliphilus denitrificans BC] gi|317116045|gb|ADU98533.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Alicycliphilus denitrificans BC] Length = 401 Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 108/405 (26%), Positives = 178/405 (43%), Gaps = 16/405 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F L + L LA V TPFY Y + I + YA+ Sbjct: 1 MDQFDTTHDELQVGGLPLSLLAERVGQTPFYAYDRSLIAARVAGVRQVLPQ-GVHLHYAI 59 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN A++ + L G+D+ S GEL+ AL A I F+G GK E+ A+ +G+ Sbjct: 60 KANPMPALVGFMRPLVDGMDVASAGELKLALDAGADPRTIGFAGPGKRDAELRQAVAAGV 119 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 + EL+ L A +LG+ A +A R+NPD G + FGI Q+ Sbjct: 120 LLHAESAR-ELEVLAASAQALGRSARVALRINPDFELRGAGMHMGGGPK-PFGIDAEQVP 177 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGG 238 ++ A G+ G ++ GSQ + ++ +L +L + ++++++GG Sbjct: 178 AMLR-AMARDGLAFEGFHIYPGSQNLRGSVIAESLHRSVELVLRLAHDAPAPVRYVNLGG 236 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGN-----LQCKIILEPGRFLVADVGILVTKVISI 293 G GI Y + + + A + Q + +++LE GR+LV + GI V +VI Sbjct: 237 GWGIPYVAGEQRLDLAPVADALAQVQAALGRALPEAQMVLELGRYLVGEAGIYVARVIDR 296 Query: 294 KKSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S + F++ D M+ + I N A +VGP+C D Sbjct: 297 KVSRGQVFLVTDGGMHQHLAASGNFGQVIRRNYPVVIGNRLQAAERESATVVGPLCTPLD 356 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 +A ++A+ +PGDL+ + ++GAYGA S + E++V Sbjct: 357 VLAERMELAVAQPGDLVVVLQSGAYGATASPQAFLGHPPCAEVLV 401 >gi|148359357|ref|YP_001250564.1| hypothetical protein LPC_1255 [Legionella pneumophila str. Corby] gi|296107404|ref|YP_003619104.1| aspartate kinase [Legionella pneumophila 2300/99 Alcoy] gi|148281130|gb|ABQ55218.1| hypothetical protein LPC_1255 [Legionella pneumophila str. Corby] gi|295649305|gb|ADG25152.1| aspartate kinase [Legionella pneumophila 2300/99 Alcoy] gi|307610512|emb|CBX00096.1| hypothetical protein LPW_18421 [Legionella pneumophila 130b] Length = 853 Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 117/371 (31%), Positives = 174/371 (46%), Gaps = 16/371 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 +P Y Y + +A + +D+ + YA+KAN ++KTL G G + VS EL Sbjct: 496 SPCYVYHSPTQATRARQL-SALESIDS-LFYAIKANPFPTILKTLEKEGIGFECVSIQEL 553 Query: 87 RRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 L ERI+F+ E + ALQ+G Y + L K Sbjct: 554 ELVLKLFPNIKKERILFTPNFAPKSEYEFALQTGCYVTIDSL-----YPLENWPDLFKDR 608 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R++P A HK +STG E KFGI S + + +K+ G+ H GS I Sbjct: 609 EVIVRIDPGTGAGHHKHVSTGGNESKFGIT-QNDISKILSLTKVNHIKVIGLHAHSGSGI 667 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQY 263 + + + +L LT Q ++ I++GGGLGI P + A L+ Sbjct: 668 LSTDLWQQTAVMLASLTDQF----PEVRSINLGGGLGIVEKPGQHPIDFAALDAQLMAVK 723 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 I LEPGRF VA+ G+++ KV K+ F+ ++ MN +RP+LY AYHEI Sbjct: 724 SQYPGLAIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEI 783 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + ++ A IVGPICE+GD + +R + + R GD++ I TGAYG S YN Sbjct: 784 VNLTRLHEEKAGF-AHIVGPICESGDTLGYDRLLPVTREGDVILIANTGAYGHCMSSHYN 842 Query: 384 SRLLIPEIMVN 394 R EI++ Sbjct: 843 LRPPAQEIVLE 853 >gi|52842038|ref|YP_095837.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629149|gb|AAU27890.1| aspartokinase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 859 Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 117/371 (31%), Positives = 174/371 (46%), Gaps = 16/371 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 +P Y Y + +A + +D+ + YA+KAN ++KTL G G + VS EL Sbjct: 502 SPCYVYHSPTQATRARQL-SALESIDS-LFYAIKANPFPTILKTLEKEGIGFECVSIQEL 559 Query: 87 RRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 L ERI+F+ E + ALQ+G Y + L K Sbjct: 560 ELVLKLFPNIKKERILFTPNFAPKSEYEFALQTGCYVTIDSL-----YPLENWPDLFKDR 614 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R++P A HK +STG E KFGI S + + +K+ G+ H GS I Sbjct: 615 EVIVRIDPGTGAGHHKHVSTGGNESKFGIT-QNDISKILSLTKVNHIKVIGLHAHSGSGI 673 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQY 263 + + + +L LT Q ++ I++GGGLGI P + A L+ Sbjct: 674 LSTDLWQQTAVMLASLTDQF----PEVRSINLGGGLGIVEKPGQHPIDFAALDAQLMAVK 729 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 I LEPGRF VA+ G+++ KV K+ F+ ++ MN +RP+LY AYHEI Sbjct: 730 SQYPGLAIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEI 789 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + ++ A IVGPICE+GD + +R + + R GD++ I TGAYG S YN Sbjct: 790 VNLTRLHEEKAGF-AHIVGPICESGDTLGYDRLLPVTREGDVILIANTGAYGHCMSSHYN 848 Query: 384 SRLLIPEIMVN 394 R EI++ Sbjct: 849 LRPPAQEIVLE 859 >gi|285017830|ref|YP_003375541.1| bifunctional diaminopimelate decarboxylase/aspartate kinase [Xanthomonas albilineans GPE PC73] gi|283473048|emb|CBA15553.1| putative bifunctional diaminopimelate decarboxylase/aspartate kinase protein [Xanthomonas albilineans] Length = 850 Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats. Identities = 111/381 (29%), Positives = 180/381 (47%), Gaps = 18/381 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +LA TP Y Y + + A +D YA+KAN++ A+++TL G G Sbjct: 480 LLRLADA-GTPRYVYHLPTLRERARALK-AIAAVDQR-YYAIKANTHPAILQTLVEEGFG 536 Query: 78 LDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 L+ VS GELRR R++F+ E + A G+ E Q Sbjct: 537 LECVSHGELRRVFETLPELSPRRVLFTPSFAPRAEYEAAFALGVTVTLDNVE-----ALQ 591 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 R +L + + R++ H+K++TG K KFG+ ++ A L +I G Sbjct: 592 RWPALFRGRSLWLRIDLGHGDGHHQKVNTGGKRSKFGLSATRVDEFVEAARALDI-RIVG 650 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V H+GS ++ E + + L +++ S I+ ID+GGGL I Y +D P Sbjct: 651 VHAHLGSGVETSEHWRRICDELAGFARRIGS----IEVIDIGGGLPIPYSADDEPFDLDA 706 Query: 256 YASLIHQYFGNLQCKIIL-EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 +A + + + EPGR+LVA+ G+L+++ + + V LD MN +RP Sbjct: 707 WAQGLAEVKQVHPGFRLAIEPGRYLVAECGVLLSRATQVIEKDGIRRVGLDAGMNTLIRP 766 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGA 373 LYDA+H++ + + + D+VGP+CE+ D R++ P D++ I GA Sbjct: 767 ALYDAWHDVVNLSRLEREADTV-FDVVGPVCESSDVFGHRRRLPAETAPDDVMLIADAGA 825 Query: 374 YGAVQSGTYNSRLLIPEIMVN 394 YG V + TYN R L E +++ Sbjct: 826 YGYVMASTYNQRELPREEVID 846 >gi|270157152|ref|ZP_06185809.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella longbeachae D-4968] gi|289164443|ref|YP_003454581.1| diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC) [Legionella longbeachae NSW150] gi|269989177|gb|EEZ95431.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella longbeachae D-4968] gi|288857616|emb|CBJ11456.1| putative diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC) [Legionella longbeachae NSW150] Length = 853 Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats. Identities = 107/371 (28%), Positives = 164/371 (44%), Gaps = 16/371 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 +P Y Y A +D + YA+KAN + A++KT+ G G + VS EL Sbjct: 496 SPCYVYHNPTQAAKAKQLL-ALKSIDA-LFYAIKANPHPAILKTMEKEGIGFECVSIQEL 553 Query: 87 RRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 R + RI+F+ E + AL G Y +R L K Sbjct: 554 DRVVELFPDIDKNRILFTPNFAPKTEYEYALNIGCYITIDSL-----YPLERWPELFKNR 608 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R++P A HK +STG E KFGI + I + A + + + Sbjct: 609 EVIIRIDPGTGAGHHKHVSTGGNESKFGITQNDIEQVVALTKKNNIQVV-----GLHAHS 663 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQY 263 + ++ + L + I++GGGLG+ +P + A L+ Sbjct: 664 GSGILTPELWQQTASMLASLTEQFPQAKSINLGGGLGVVEKPGQQPLDFVNLDALLMAVK 723 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 Q KI LEPGRF VA+ G+++ KV K+ F+ ++ MN +RP+LY +YHEI Sbjct: 724 SRYPQIKIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGSYHEI 783 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + ++ + IVGPICE+GD + +R + + GD+L I TGAYG S YN Sbjct: 784 VNLSRLYEEKAGF-SHIVGPICESGDTLGYDRLLPVTEEGDVLLIANTGAYGRCMSSHYN 842 Query: 384 SRLLIPEIMVN 394 R EI++ Sbjct: 843 LRPPAQEIVLE 853 >gi|325981618|ref|YP_004294020.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosomonas sp. AL212] gi|325531137|gb|ADZ25858.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nitrosomonas sp. AL212] Length = 411 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 99/402 (24%), Positives = 177/402 (44%), Gaps = 14/402 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQT-PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 F + L ++L +LA V T PFY Y I + + ++ YA+KA Sbjct: 13 QFSVQDDCLQIGGMALTRLADRVGTTPFYAYDRKKITERVELLRQNLPQ-EVLLHYAIKA 71 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N AV++ LA L G+D+ S GE+R AL + +E+I F+G GK + E+ A+ +G+ Sbjct: 72 NPMPAVVQHLASLVDGMDVASAGEMRVALDTTLTSEKISFAGPGKKVHELRSAIAAGVV- 130 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 N+ES E++ + Q+ V LG +A R+NPD + +G FGI + + Sbjct: 131 LNIESPQEMELIAQQGVDLGMAPKVAIRINPDFELKSSGVKMSGG-SKPFGIDAECVPDV 189 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 L + ++ K++ Q + +++ +++GGG G Sbjct: 190 LKRLDLLDLNFVGFHIFSGSQNLNAAAIQESHEKIVMLAIQLAKYAPSSVKLLNIGGGFG 249 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCK-----IILEPGRFLVADVGILVTKVISIKKS 296 + Y +P + + + ++ + + LE GR+LVA+ GI V +V+ K S Sbjct: 250 VPYFPGDQPLDIAAIGVNLQRLIKRIKQQLPETTVALELGRYLVAEAGIYVCRVLERKAS 309 Query: 297 ADKTFVILDVAMNDFMRPT----LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + F++ D ++ + + + I N +VGP+C D +A Sbjct: 310 RGQVFLVTDGGLHHHLAASGNLGQVIRKNYPVVIGNKVQGTAREIVSVVGPLCTPLDVLA 369 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 +A DL+ + ++GAYG S T + E++V Sbjct: 370 DQMAMARASVNDLVVVLQSGAYGLTASPTAFLDHPPPIEVLV 411 >gi|229106622|ref|ZP_04236863.1| Decarboxylase [Bacillus cereus Rock3-28] gi|228676804|gb|EEL31409.1| Decarboxylase [Bacillus cereus Rock3-28] Length = 411 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 100/392 (25%), Positives = 165/392 (42%), Gaps = 13/392 (3%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 V L +P Y Y+ + K+Y N+ +++ Y+LKAN N + + L +LG Sbjct: 2 VDYNCLVEEYGSPLYVYNLAELTKSYQKLINSLPD-KSIIYYSLKANPNPEITRHLINLG 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +I S GEL L E +++G GKT EI AL + F+VES +EL+ +N Sbjct: 61 CYAEISSIGELDTVLDVGGSPEHCLYTGPGKTKKEIQYALSKNVSHFSVESFNELEIIND 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + K I R+NP N TG + +KI+G Sbjct: 121 LTKNHSKLINITLRINPSFNVGNASIKMTGIPSQFGFDEECLNSDIIKLFKGNKNLKING 180 Query: 196 VDMHIGSQIDQIES-FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 ++ GS + I+ +L + +I+ +D GGG + D P Sbjct: 181 FHIYNGSNFNNIDILVENYTNILETILNLKNKLSIDIEFVDFGGGFAAPFGKDLDLPDYK 240 Query: 255 DY-----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + A L + N + I E GR+L A G L+ V S+K+S + + I+D +N Sbjct: 241 ELKDSLEALLNKHFKDNHRPTIAFESGRYLTATCGCLIGTVQSVKESKGRKYCIVDFGIN 300 Query: 310 DFMRPTLYDAYHEINYIV-----NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 + I + + + IVGP+C D++A N ++ +PGD Sbjct: 301 HLGGMSGLRRIPTIELNILKLNISVEDNAKVETVTIVGPLCTPLDYLAKNVSVSKLQPGD 360 Query: 365 LLYIEKTGAYGAVQS-GTYNSRLLIPEIMVNG 395 ++++ GAYG S + SR + EI++ Sbjct: 361 VVFVPNVGAYGLTASLIAFLSREIPKEIIIKN 392 >gi|239906758|ref|YP_002953499.1| decarboxylase [Desulfovibrio magneticus RS-1] gi|239796624|dbj|BAH75613.1| decarboxylase [Desulfovibrio magneticus RS-1] Length = 417 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 92/398 (23%), Positives = 153/398 (38%), Gaps = 9/398 (2%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 T Y A+ ++AF +A+KA V+ LA LG G + S Sbjct: 14 REQDTAVVLYDLDALTARVEALTSAFPAETVH-AFAVKACPLPPVLAMLAQLGLGAEAAS 72 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GE+ ALAA P+ERIVF KT++E+ LAL G++ + L L+ +G Sbjct: 73 LGEIHLALAAGFPSERIVFDSPAKTVEELRLALSLGLFVNADNLDE-LDRLDDLGRDMGL 131 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 R+NP K S + KFG+P+ Q ++ P + V + Sbjct: 132 VPRAGLRINPQAGTGRIKATSVAGRYSKFGVPLPQREAIVDAFGRYPWLSGLHVHIGSQG 191 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ R + D+GGGL AY RPPS Y + Sbjct: 192 CPLELLVAGVGAVYDLAADLDARFGPGRVAVFDLGGGLPAAYRDADRPPSPQAYFEALRV 251 Query: 263 YFGN---LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 Q +++ E GR + A + ++V +K+ ++ + + F+R Sbjct: 252 RCPGLEGNQRRLVTEFGRMMAAPCAVAASRVEYVKRQPGHRTAVMHLGADMFVRECYNPR 311 Query: 320 YHEINYI----VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + + + GP+C +GDF + GD++ IE GAY Sbjct: 312 FWPHRTRLLGAHGLEKQGKPVLHHLAGPLCFSGDFPVRRAMLPEATAGDIVVIEDVGAYT 371 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 YNSR + + + F ++R R ++L++ Sbjct: 372 LSMWSRYNSRQMPRVLGLRQGHFSVLREREEPEDLVQF 409 >gi|283850744|ref|ZP_06368031.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio sp. FW1012B] gi|283573987|gb|EFC21960.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio sp. FW1012B] Length = 420 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 103/399 (25%), Positives = 164/399 (41%), Gaps = 9/399 (2%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 T Y +E + AF G T+ A+KAN V+ L LG+G + Sbjct: 13 IRETDTAVVVYDLDRLEAGVAELAAAF-GPQTLAAVAVKANPLPPVLAFLWGLGAGAEAA 71 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL ALAA VPA RIVF KT DE+ LAL G++ E E+ L+ A SLG Sbjct: 72 SLPELHLALAAGVPAGRIVFDSPAKTADELRLALTLGVWVNADNLE-EVARLDTLAASLG 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + RVNP + K S + KFG+P+ + + A + P + V + Sbjct: 131 RPPEAGLRVNPQVGLGRIKATSVAGRYSKFGVPLEKRREIKAAFARHPWLTGLHVHVGSQ 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + L ++ +D+GGGL Y + PP+ + YA+ + Sbjct: 191 GCPLDLLVAGVGAVYDLALEIDREQGPGRVRRLDIGGGLPATYRENDSPPTPAAYAAALA 250 Query: 262 QYFGNLQ---CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + +++ E GR+L A + +++V +K+ +L + + F+R Sbjct: 251 TRCPGIFSGDRELVTEFGRWLHAPAAVAISRVEYVKRQRGHRTAVLHLGADMFVRECYNP 310 Query: 319 AYHEINYIVNPAGD----RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 V A + GP+C +GDF ++ GDLL I GAY Sbjct: 311 KSWSHRVAVLTADGLEKTGEKSAWHLAGPLCFSGDFPVWRVRLPDIDEGDLLVIRDVGAY 370 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 YNSR + + V +F ++R R + +++ Sbjct: 371 TLSMWSRYNSRQMPRVLAVRDGRFSVLRERESPDDVVRF 409 >gi|303290454|ref|XP_003064514.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454112|gb|EEH51419.1| predicted protein [Micromonas pusilla CCMP1545] Length = 437 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 94/419 (22%), Positives = 158/419 (37%), Gaps = 37/419 (8%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP Y Y ++ + + V YA+KA+ N A++K + G +D S Sbjct: 28 HGTPTYVYDAATLKAQAAKALDFPNAFGLTVRYAMKASPNAAILKIFRNAGLKIDASSGH 87 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E+RRA+ A S +L + S+ E A Sbjct: 88 EVRRAVRAGFDHADCSLSTQEFPEFFEELVKKGLKVNACSLSQLEAFGAA------FPGA 141 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I R NP + + K + G FGI H++ G+K+ + HIGS Sbjct: 142 EIGLRFNPGLGSGGTGKTNVGGPSSSFGIW-HELLPEARAICEKHGLKVVRIHTHIGSG- 199 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 S ++ ++ L ++ +++GGG + + + + + + F Sbjct: 200 ----SDPAVWQKTSGMSLDLCREFPTVETLNLGGGYKVGRMAYEKSTDLAVVGAPVKALF 255 Query: 265 GNLQCKI------ILEPGRFLVADVGILVTKVISIKK-----SADKTFVILDVAMNDFMR 313 + +EPG FL+A+ +V V F+ LD M + +R Sbjct: 256 EAFAKETGRELRLEIEPGTFLLANSCAIVCTVQDKVTTGAASDGGHVFLKLDAGMTEVLR 315 Query: 314 PTLYDAYHEINYIVNPAGDRLH--IHADIVGPICETGDFIA---------LNRKIALPRP 362 P+LY A H + + G +VG CE+GD + R + Sbjct: 316 PSLYAAQHPLVTVSAATGKEPEGTEKYVVVGHCCESGDLMTPGPDDAEEIAERAMGEVER 375 Query: 363 GDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDS-IPA 418 GDLL +E GAY A S YNS PE+M FH+IR + + ++++ + +P Sbjct: 376 GDLLVVEGAGAYCAGMSGKNYNSFPEAPEVMRTAEGTFHVIRKKQSLEQIMANEVELPD 434 >gi|150021213|ref|YP_001306567.1| Orn/DAP/Arg decarboxylase 2 [Thermosipho melanesiensis BI429] gi|149793734|gb|ABR31182.1| Orn/DAP/Arg decarboxylase 2 [Thermosipho melanesiensis BI429] Length = 386 Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 89/378 (23%), Positives = 160/378 (42%), Gaps = 15/378 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L+++A TP ++ NY + ++ V YA+KANS+ ++K L LGS Sbjct: 9 RLKRVAETFGTPVLVMDLNIVKANYEKLIDNVR--NSRVYYAVKANSHIEILKLLRDLGS 66 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S E+ + L+ V ER+ F K +I A +GI F V+SE E++ + Sbjct: 67 YFDVASRPEIEKLLSIGVEPERMSFGNTIKKTKDISFAYNNGIRMFAVDSEMEIEKIADN 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + N + + KFG + L YA L + GV Sbjct: 127 APGSDIYVRI--------STNGMEDDADWPLTRKFGTSVDHAIKLVKYAVDLE-LNPIGV 177 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS-D 255 H+GSQ +++ A + + + ++ R G ++ ++ GGG+ + Y + + Sbjct: 178 SFHVGSQNYNPDNWRVAIREVSVVFEEARKMGIDMYMVNTGGGMPVKYSRNIPSVEEISE 237 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 + + ++LEPGR +V G +VT VI K ++ +V D + + T Sbjct: 238 VINKAIVDYIGENTLVVLEPGRSMVGSAGAMVTSVILRSKKGEENWVYTDAGIFHGLTET 297 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAY 374 + + +E+ I + GP C++ D + + ++A DL+ + TGAY Sbjct: 298 IQNIRYEVEVIGREL--EEKGKFVLAGPTCDSVDVMYYDIELAKNVTIDDLIVLYNTGAY 355 Query: 375 GAVQSGTYNSRLLIPEIM 392 S +N + Sbjct: 356 TTEYSTNFNGIEPPKVVF 373 >gi|116515197|ref|YP_802826.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116257051|gb|ABJ90733.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 416 Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 113/411 (27%), Positives = 184/411 (44%), Gaps = 30/411 (7%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L +TP + Y++ K + FD ++ +A K+ SN ++K + +D Sbjct: 20 LIKKYKTPIWIYNSEI-IKKQIKKLKKFD----IIRFAQKSCSNIHILKLMRKKNIKIDA 74 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RAL A + + + T D I+ + + + + + + ++ Sbjct: 75 VSLGEIERALLAGFKPKN---NNIVFTSDIIENKVLKKVIKYKIPVNAGSIDMLKKIGKK 131 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 K P+ R+NP H K +TG + K GI + S + K++ + +HI Sbjct: 132 SLKHPVWIRINPKFGDGHHIKTNTGGENSKHGIW-----NPKKALSVIKKYKLNLIGLHI 186 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 K+ + + I+ I GGG+ I Y S + + DY S Sbjct: 187 HIG--SGIKTKNLHKVCNAMKKYAIKLKTKIKFISAGGGISIPYKSKEKEINIKDYFSQW 244 Query: 261 HQYFG------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + N ++ +EPGRFL A GIL+ KV +IKK FV+++ ND +RP Sbjct: 245 DKTKKKISSILNCSIQLEIEPGRFLTAQSGILIAKVYAIKKMGKNIFVLINSGFNDLIRP 304 Query: 315 TLYDAYHEIN--YIVNPAGDRLHIHADIVGPICETGDFIAL-------NRKIALPRPGDL 365 LY +YH+I + R I P+CE+GD + +RKI + GD Sbjct: 305 ILYGSYHKITVFHKKKSKKKRKKIKTIFAEPLCESGDVFTIKKNEIIFHRKIPQVKLGDY 364 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + I TGAYG+ S YNSR IPEI+ + F IR R T +E++ L+++ Sbjct: 365 IIIHDTGAYGSSMSSNYNSRPFIPEILYKKNNFVQIRRRQTIKEMLSLETL 415 >gi|289548121|ref|YP_003473109.1| Orn/DAP/Arg decarboxylase 2 [Thermocrinis albus DSM 14484] gi|289181738|gb|ADC88982.1| Orn/DAP/Arg decarboxylase 2 [Thermocrinis albus DSM 14484] Length = 390 Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 92/368 (25%), Positives = 162/368 (44%), Gaps = 19/368 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP I+ Y+ V YA+KAN + +I+ LA LGSG ++ S EL Sbjct: 39 TPVLYMDLEGIKSRYIELRYHLPQ--VKVYYAVKANDHPEIIRVLAELGSGFEVASSEEL 96 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 RR L V +R++ S K +D I+ A G+ F V+S +E+ L + + Sbjct: 97 RRVLEMGVSPDRVISSNPVKPMDFIEYAYSKGVDRFAVDSFTEVDKLAK----------V 146 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A R + + S KFG+ ++ + YA G+ GV H+GSQ + Sbjct: 147 AKRSRVYVRLVVPNEGSDWPLSKKFGVDVNTALDILEYARE-KGLIPYGVTFHVGSQCNN 205 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYF 264 ++ + +L + + G +Q +++GGG+ + Y + Y ++F Sbjct: 206 YRNWFIGIRTAAELWSKAKERGLRLQMLNLGGGIPVRYTYEALSVEDIAYYVRGLLQKFF 265 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 ++ ++ +EPGR +V D GI+VT+VI + ++ ++ +D + + + L I Sbjct: 266 PSMPHELQIEPGRGIVGDQGIMVTRVIGKARRGNENWIYIDTGVFNGLAEAL----GGIR 321 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 Y + I G C++ D +A + + P GD LYI GAY V + +N Sbjct: 322 YAFYLDREGELEEWTIGGVSCDSMDVVARSVPLPEPEVGDYLYILSAGAYTTVYAANFNG 381 Query: 385 RLLIPEIM 392 + + Sbjct: 382 FPVPQVVF 389 >gi|89899511|ref|YP_521982.1| Orn/DAP/Arg decarboxylase 2 [Rhodoferax ferrireducens T118] gi|89344248|gb|ABD68451.1| Orn/DAP/Arg decarboxylase 2 [Rhodoferax ferrireducens T118] Length = 414 Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 106/405 (26%), Positives = 171/405 (42%), Gaps = 16/405 (3%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M+ F EG L L LA V TPFY Y + + YA+ Sbjct: 14 MNQFSVREGELTVGGERLSLLAARVGQTPFYAYDRLLLRARVAALRGVLPRT-VKLHYAM 72 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KAN AV+ + L G+D+ S GEL+ AL A I F+G GK E+ A+ S Sbjct: 73 KANPMPAVVGLMVGLVDGIDVASAGELKVALDAGANPLEISFAGPGKRDAELRQAVAS-R 131 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N+ES E+ L LG A +A RVNPD G + +FG+ + QI Sbjct: 132 VLINLESFREVAALEAICGELGLSARVAVRVNPDFELKGSGMKMGGGPK-QFGVDVEQIP 190 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGG 238 L G + GSQ + ES +A + +L +L + ++ +++GG Sbjct: 191 ELLGCIGRAGLS-FEGFHLFAGSQNLRSESICEAQQKSYELALRLAQHAPAPVRFLNLGG 249 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI-----ILEPGRFLVADVGILVTKVISI 293 G GI Y + + + Q Q ++ ++E GR+LV + G+ V +++ Sbjct: 250 GFGIPYFPGEQRLDLAPIGDNLAQLVQRAQTELPDAALVIELGRYLVGEAGVYVARIVDR 309 Query: 294 KKSADKTFVILDVAMNDFMR----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 K S + +++ D ++ + + I N A R +VGP+C D Sbjct: 310 KVSRGQVYLVADGGLHHHLSASGNFGQVIRKNYPVTIGNKADSRETETVSVVGPLCTPLD 369 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 +A + + + DL+ + ++GAYGA S + E++V Sbjct: 370 LLAERMALPVAQVDDLVVVFQSGAYGASASPQGFLGHPACLEVLV 414 >gi|294811317|ref|ZP_06769960.1| Decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|326439949|ref|ZP_08214683.1| pyridoxal-dependent decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294323916|gb|EFG05559.1| Decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 542 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 89/443 (20%), Positives = 152/443 (34%), Gaps = 47/443 (10%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L +P Y Y + A + + Y+LKAN + ++ L G+ ++ Sbjct: 12 LVERYGSPLYIYDLARVRAALEDLRAALPQ-PSRIYYSLKANPHPGLVAELRRGGARAEV 70 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S GEL AL A PA +++SG GK E+D A+ +G+ F+ ES +L+ + A + Sbjct: 71 TSRGELAAALEAGHPAAELMYSGPGKVRAELDEAVAAGMRTFSAESFGDLERIGAAAAAQ 130 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 G A R+ A + +FG + + A + + Sbjct: 131 GVTADCVLRI-NAAGAPGQAGLRMTGGPSQFGFDLDGLTEQRARLLVQGTRIVGMHFFPL 189 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + D+ + + +R Q G + +D+GGG Y + P + + Sbjct: 190 TNARDEAGLLAELAQSVRTAAQLREELGIPLHLLDLGGGFSAPYATPGERPVYRGLRTAL 249 Query: 261 HQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 E GR+LV D G LV V +K S + +LD +N Sbjct: 250 STVLDEHLPGWRDGEPVVAFESGRYLVGDSGRLVVTVTDVKHSRGSDYAVLDSGINHLGG 309 Query: 314 PTLYDAYH--------------------EINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + E + + D + GP+C D +A Sbjct: 310 LSGLGRLLPLSAQPLVPPVLPDQGAGAAETDGKTDGETDGEPGTVTLAGPLCTPADILAR 369 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQ----FHIIRPRMTFQ 408 ++ GDLL GAYG S + E++V+G + + R Sbjct: 370 AAELPGVAAGDLLVFPNVGAYGLSASLLGFLGHPAPAEVLVDGGETVSATRLALRRQ--- 426 Query: 409 ELIELDSIPAWLQKTPKQSSENY 431 +Q P +E + Sbjct: 427 ----------HIQPAPVHRTEEF 439 >gi|323447664|gb|EGB03577.1| hypothetical protein AURANDRAFT_39321 [Aureococcus anophagefferens] Length = 463 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 98/415 (23%), Positives = 156/415 (37%), Gaps = 33/415 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 TP Y Y + + V YA+KA N AV++ +G D S Sbjct: 53 EAFGTPCYVYDAPTLVARAEEALAFPNAFGVTVRYAMKACPNGAVLRLFESMGLHFDASS 112 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+RRALAA + A +I S D DL + ++ E Sbjct: 113 VYEVRRALAAGIAASKISLSTQQLDDDFGDLVKEGLKVNACSLAQLEAFGAA------FP 166 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 A + R NP + + K + G FGI + A A + + + Sbjct: 167 GADVGVRFNPGVGSGGTSKTNVGGPSSSFGIWHEDFDEVAAIAGKHDLNVVR-----VHT 221 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 I ++ R G ++ +++GGG + + + S + Sbjct: 222 HIGSGSDAAVWQRVSRMSLDLCERLGGTVKTLNLGGGYKVGRMAYEQSTDLSVVGEPVKA 281 Query: 263 YFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSA----DKTFVILDVAMNDFM 312 F + +EPG FLVA+ G LVT + + + F+ LD M + + Sbjct: 282 EFEAYAERTGDELKLEVEPGTFLVANAGALVTTIQDVTSTKGSEAGNDFLKLDCGMTEVL 341 Query: 313 RPTLYDAYHEINYIVNPAG-DRLHIHADIVGPICETGDFIA---------LNRKIALPRP 362 RP+LY A H + + + H +VG CE+GD + +R +A Sbjct: 342 RPSLYGAQHPLVVVKRDGTLNDEHKPYVVVGHCCESGDLLTPAPDEPETLASRDLAAADR 401 Query: 363 GDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDS 415 GDL+ +E GAY A S YNS PE++ + FH+IR R + +L + Sbjct: 402 GDLMVVESVGAYCAAMSTAGYNSFPSAPEVLHDKDGNFHLIRKRSSLDQLTMNEV 456 >gi|193215600|ref|YP_001996799.1| Orn/DAP/Arg decarboxylase 2 [Chloroherpeton thalassium ATCC 35110] gi|193089077|gb|ACF14352.1| Orn/DAP/Arg decarboxylase 2 [Chloroherpeton thalassium ATCC 35110] Length = 452 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 101/429 (23%), Positives = 174/429 (40%), Gaps = 34/429 (7%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--LKANSNQAVIK 69 + ++V++E L +P + S I + Y +AF V +A K N AV K Sbjct: 33 YIDDVAVEDLLADYGSPLFVISERTIREVYQEALSAFKTRYPKVQFAWSYKTNYLNAVCK 92 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 GS ++VS E +ALA VP +I+F+G KT ++ A++ G ++ E Sbjct: 93 VYHQEGSWAEVVSGFEFEKALANGVPGGKIIFNGPDKTEADLRKAIEHGALIH-IDHFDE 151 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + A LG+ A +A R+N D + D+FG + A +P Sbjct: 152 LYEIMRLAPELGQTAKVAVRINMDTG--------IYPRWDRFGFNYENGEAWAAINKIMP 203 Query: 190 GVKISGVDMHIGSQIDQIESFHKA---FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY-- 244 + V +H + A KL + + R H I+++D+GGG Sbjct: 204 APNLELVGLHTHIGTYIMTPNAYAIATEKLAALVVRIERKYKHPIKYLDLGGGFASKNTL 263 Query: 245 -----HSDHRPPSSSDYAS------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 PS DYA + + LE GR L+ + G L+ V++ Sbjct: 264 KGAYLPGSDTCPSFDDYAEAVTETLINSDIQYEQMPALFLETGRALIDEAGYLLGTVLAN 323 Query: 294 KK-SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K+ + + +++D+ +N+ Y+ + + R I GP+C D I Sbjct: 324 KRLADGRRSLVIDIGVNNLFTSFWYNHHI----VPARMNQRDTEDTTIYGPLCMNIDVIR 379 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELI 411 + GD + I++ GAY Q + + ++++ Q HIIR T + + Sbjct: 380 EAVMFPVLEKGDPVVIKRVGAYNMTQWLQFITY-RPKVVLIDMNGQPHIIRENETLETMN 438 Query: 412 ELDSIPAWL 420 LD +P L Sbjct: 439 ALDRMPGHL 447 >gi|237807627|ref|YP_002892067.1| Ornithine decarboxylase [Tolumonas auensis DSM 9187] gi|237499888|gb|ACQ92481.1| Ornithine decarboxylase [Tolumonas auensis DSM 9187] Length = 386 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 77/397 (19%), Positives = 149/397 (37%), Gaps = 17/397 (4%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + + +L +P A+ K Y + A G + YALK + AV Sbjct: 2 NNEIVPAELDYRELVATYGSPLLVLDQAAVRKQYRALTQALPG--VRLHYALKPLPHSAV 59 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + TL G G D+ + GE+ L + + + + K +I AL+ G F ++ Sbjct: 60 VATLKAEGCGFDLATNGEVDVMLENQINPDDCIHTHPIKRDGDIRYALEYGCKVFVFDNP 119 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 EL ++F + KFG L A Sbjct: 120 VELDKFLPYQDKAELLLRVSF----------PNPETKVDLSKKFGCTPEAALPLLRKAKA 169 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 + + G+ H+GSQ+ + +A + + + N+Q +D+GGG + Y +D Sbjct: 170 MGL-NVIGLSFHVGSQVPNSKRHVEAITSCNQILRDAAAEDINLQVLDIGGGFPVNYGAD 228 Query: 248 HRPPSSSDYASLIHQY--FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 ++ + I + +++ EPGRF+ A V V+ + ++T+ LD Sbjct: 229 GADFDIYEFCAPIREALSHTPKGIRLLAEPGRFISAPCMTSVASVMGKAERFERTWYYLD 288 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 + L+D + G+ A + GP C++ D +A + + GD+ Sbjct: 289 DGLYGSYSGQLFDHINYPKSAPYATGEA--KPAVLAGPTCDSIDVLADDIDLPELDVGDV 346 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIR 402 + + GAY + +N ++++ + I+ Sbjct: 347 IVGKMMGAYTWASATEFNFFRKASILVIDSQEAIEIK 383 >gi|284050162|ref|ZP_06380372.1| Orn/DAP/Arg decarboxylase 2 [Arthrospira platensis str. Paraca] gi|291572167|dbj|BAI94439.1| diaminopimelate decarboxylase [Arthrospira platensis NIES-39] Length = 409 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 94/399 (23%), Positives = 163/399 (40%), Gaps = 18/399 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +KL + +P Y Y +++ A + T +A N + A++K GL Sbjct: 25 QKLLDIYGSPLYVYDAEILQETINHIGGAVNYPKTRFKFASVTNGSIALLKIFQQANWGL 84 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 + G+ L A ++IV+SG E L L GI +N++S +L+ + Sbjct: 85 HANTPGDAFLGLKAGFHPQQIVYSGSNLNHREFQLLLNWGITTYNLDSLDQLQLFGEVFQ 144 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 L ++ + + G+ + AS G+KISG+ Sbjct: 145 QLKPDFLPKLGFRLNLP--------KINGDSRIGVNPQEFPEAIKIAS-SAGLKISGLHF 195 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + G+ + SF + K L + QQL + Q++D GGG G Y + Sbjct: 196 YRGTGTNATSSFTQVIKPLLAIGQQL----PDWQYLDFGGGFGYPYQHQKSAFDWQLFGE 251 Query: 259 LIHQYFGN--LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 I + +I+EPGR +A G L+T+V+S K + K V +D + + P++ Sbjct: 252 QITAELNQLDREIDLIIEPGRSAIASCGTLLTQVVSTKWQSPKQIVGVDTTVANLSVPSV 311 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 Y Y EI + H D+ G + D++ NR++ + GD+L I GAYG Sbjct: 312 YGNYREIVPFSDTPN---HYITDVCGNTTYSRDYLGKNRQLPQLKRGDILAILDCGAYGY 368 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 S + R E+++ + +IR R + L+ Sbjct: 369 AMSSHFLHRPRPAEVLLKQGKHQLIRQREDYNILLTQQV 407 >gi|260654439|ref|ZP_05859929.1| lysine/ornithine decarboxylase [Jonquetella anthropi E3_33 E1] gi|260631072|gb|EEX49266.1| lysine/ornithine decarboxylase [Jonquetella anthropi E3_33 E1] Length = 410 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 83/382 (21%), Positives = 151/382 (39%), Gaps = 16/382 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 LA +P S E+NY T S+ + + YA+K+N + ++KT A LGSG Sbjct: 45 SALAEKYGSPLVVLSLKQAEQNYRTLSDWLNR--VKLHYAMKSNPAEPLLKTFADLGSGF 102 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D+ + GE++ L V R++++ K + I A + G+ F +S +E+ + A Sbjct: 103 DVATIGEIKTLLQLGVDPSRLIYANPTKPENWIAQAWKLGVTRFTYDSPAEVGKIAANAP 162 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + KFG L A G+ ++G+ Sbjct: 163 GASVWLRVRI----------ANPGALVNLNSKFGASQADALDLLQLAK-SKGLDVAGLSF 211 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 H+GSQ + + + R + + G ++ +D+GGG I + D Sbjct: 212 HVGSQTRDSGPYLNSLAVCRRIFNEAAEMGVPLRSLDIGGGFPIVELGYDIDQETMDSQI 271 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + +++ EPGR L L+T VI + + + ILD + L+D Sbjct: 272 RDELEDLFPETELLAEPGRALCGTTANLITSVIGKQVRDGQDWYILDDGIYGTFSGILFD 331 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ + A + GP C++ D + +R GD L + GAY + Sbjct: 332 ---RWDFELLSAKTGPLYLSTFAGPSCDSLDVLFRDRSTPELEVGDRLVVPACGAYTSAS 388 Query: 379 SGTYNSRLLIPEIMVNGSQFHI 400 + T+N L P ++ + + Sbjct: 389 ATTFNGFSLTPIVIWEEVKESL 410 >gi|170700579|ref|ZP_02891580.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia ambifaria IOP40-10] gi|170134527|gb|EDT02854.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia ambifaria IOP40-10] Length = 402 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 101/406 (24%), Positives = 170/406 (41%), Gaps = 17/406 (4%) Query: 1 MSA-FKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA 58 M+ F +G L ++ +LA TP++ Y AI+ L +A ++ Y+ Sbjct: 1 MNHPFSERDGMLVVGGATIARLADRAGRTPYFAYDRAAIDARVLALRDALP-PGVLLHYS 59 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN AV+ L+ G D+ S EL AL A +PA++I F+G GK DE+ A+ SG Sbjct: 60 IKANPMPAVVHHLSTRIDGFDVASATELALALDAGMPADQIGFAGPGKGSDELRRAVASG 119 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + +L + LG + IA R+NPD + + + G FG+ + Q+ Sbjct: 120 VNVHVESLT-QLHLVTALGWELGVQPNIAIRINPDFHVD-RSGMRMGGGAAAFGVDLEQV 177 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 +L ++G + GSQ + +A + DL +L ++ G Sbjct: 178 PALLRELEARDAT-LAGFHVFWGSQCLHAPTVIQAQRQSADLVMKLAADRSVAPRFVNLG 236 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQC------KIILEPGRFLVADVGILVTKVIS 292 G + P + + + ++ILE GR+LV + GI V +VI Sbjct: 237 GGFGIPYFPGETPLDVGAVTDAMRSWLPQFTENLPGTRLILELGRYLVGEAGIYVCRVID 296 Query: 293 IKKSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 K S K F++ D ++ + + N G+ IVG +C Sbjct: 297 RKVSRGKMFLVTDGGLHHHLAASGNFGQVLRRNFPVLLGNRLGEAPRERCQIVGCLCTPL 356 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMV 393 D IA + + GDL+ + ++GAYG S + E++V Sbjct: 357 DRIAEDVPLPDAHIGDLVVVLQSGAYGRSASPSRFLGHPDAIEMLV 402 >gi|145640803|ref|ZP_01796385.1| diaminopimelate decarboxylase [Haemophilus influenzae R3021] gi|145274317|gb|EDK14181.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.4-21] Length = 265 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 123/258 (47%), Positives = 178/258 (68%), Gaps = 1/258 (0%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKHNKLYAEDMPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ +++ Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARE 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y ASTLP +KI+G+D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGL Sbjct: 181 VYKLASTLPNIKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGL 240 Query: 241 GIAYHSDHRPPSSSDYAS 258 G+ Y + PP SDYA+ Sbjct: 241 GVTYTDE-TPPHPSDYAN 257 >gi|167524549|ref|XP_001746610.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774880|gb|EDQ88506.1| predicted protein [Monosiga brevicollis MX1] Length = 795 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 103/370 (27%), Positives = 170/370 (45%), Gaps = 17/370 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE-- 85 P Y YS + + + +D+ + +A+KANS+ V++ + G+G + VS+ E Sbjct: 439 PVYVYSRDMAFRQTQRLISNLNAVDS-LFFAIKANSHPDVLRAVHAAGAGFECVSQMEID 497 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L +L + ++F+ E + AL+ G+ S + Q L + A Sbjct: 498 LILSLFPDIDVRHLLFTPNFAARSEYEHALKLGVNVTVDNSF-----VLQEWHELFRGAK 552 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R++ H + TG KFG+ +H + A G+++ G+ H GS ++ Sbjct: 553 VLLRIDSGQGQGHHAHVKTGGSASKFGLDVH-ELAEVAQLCAAHGIEVFGLHCHSGSGVE 611 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF- 264 + + L L ++ + I+VGGGL I Y + + Sbjct: 612 NTTLWANHLQYLAKLAREH---FPAARVINVGGGLSIPYTFGGAEVNLKAVDDALAAAKA 668 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 Q ++ +EPGRF+ A GI++ KV IK + FV + M+ +RP LY AYHE+ Sbjct: 669 EFPQFQVWMEPGRFIAAQCGIVLAKVTQIKHKSGVKFVGVTAGMHTMIRPALYQAYHEVV 728 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYN 383 N + D +A + GPICE+GD A R + R GD+L I+ GAYG + TYN Sbjct: 729 ---NISRDGPPANAVVCGPICESGDVFARERPLPEDTREGDVLLIDCCGAYGFCMASTYN 785 Query: 384 SRLLIPEIMV 393 R L E++V Sbjct: 786 LRPLPEELIV 795 >gi|15606123|ref|NP_213500.1| ornithine decarboxylase [Aquifex aeolicus VF5] gi|2983314|gb|AAC06904.1| ornithine decarboxylase [Aquifex aeolicus VF5] Length = 390 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 103/389 (26%), Positives = 175/389 (44%), Gaps = 19/389 (4%) Query: 5 KYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 +YFE L +EKL +TP ++K YL F + V YA+KAN + Sbjct: 17 RYFEEFLSERKGRIEKLLKPEKTPVLLMDIQGVKKKYLEVKYHFPEFN--VYYAVKANDD 74 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++VI+ L +G+G ++ S EL + L E+++ S K + I+ A Q G+ F V Sbjct: 75 ESVIRALVEVGAGFEVASSQELEKVLRLGGKIEKVISSNPVKPPEFIEFAYQKGVRTFAV 134 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +S +E+K + A IA + S KFG+ + + + Y Sbjct: 135 DSITEVKKIKDIAPRSKVYVRIAV----------PNEGSDWPLSRKFGVSVEEAVEILEY 184 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 A+ L V G+ H+GSQ + + ++ A KL L ++ R+ G +Q +++GGG+ + Y Sbjct: 185 ANDLGLV-PYGITFHVGSQCNNLRNWFIAVKLSAQLWEKARAKGLKLQMLNMGGGIPVRY 243 Query: 245 HSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 + + Y + +YF ++ +EPGR +V D GI+VTKVI K + ++ Sbjct: 244 NYEALSVEDIAYYVKGLMRKYFPVQPYELQIEPGRGIVGDQGIMVTKVIGKAKRGSENWL 303 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +D + + + L + + I G C++ D +A N + P Sbjct: 304 YIDTGVFNGLAEALGGIRYPFFL----EREGELKEWTIGGVSCDSMDVVAKNVYLPEPEV 359 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 GD LYI GAY V + +N + Sbjct: 360 GDYLYILSAGAYTTVYASNFNGFPKPEVV 388 >gi|227872752|ref|ZP_03991075.1| possible diaminopimelate decarboxylase [Oribacterium sinus F0268] gi|227841413|gb|EEJ51720.1| possible diaminopimelate decarboxylase [Oribacterium sinus F0268] Length = 394 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 89/398 (22%), Positives = 148/398 (37%), Gaps = 14/398 (3%) Query: 39 KNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAE 97 AF +A+KA N A+++ L G G+D S+ EL A A + Sbjct: 1 DTARKLYKAFSWNPGFKEYFAIKATPNTAILRILKEEGCGVDCSSKVELTMAEACGFKGQ 60 Query: 98 RIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINAN 157 I+FS +E A + G + ++ R NP Sbjct: 61 EIMFSSNDTPEEEYIFAKELGGIINLDDF---SNIAEVEETLGTLPKTMSLRFNPGGYFK 117 Query: 158 THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 I +E KFG+ QI Y + + A +L Sbjct: 118 IANTIMDNPEEAKFGMTEAQILEGYKILKEKGVEHFGIHAFLASNTVSNEYYPVLARQLF 177 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL-------QCK 270 + + + + G ++ +++ GG+GI Y + P + + F + + Sbjct: 178 QLVVRIKKELGISLDFVNLSGGIGIPYRPEQEPNDILLIGQGVKEVFEEILVPNGLGHIR 237 Query: 271 IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 + E GRF++A G L+TKVI K + + +D + MRP +YDAYH I + Sbjct: 238 LCTELGRFMLAPYGALITKVIHFK-ETYRHYAGVDACAANLMRPAIYDAYHHITVLGK-E 295 Query: 331 GDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE 390 ++ D+VG +CE D A NR++ + GD L+ GA+G YN +L E Sbjct: 296 EEKETKTYDVVGSLCENNDKFAKNRELPVLEKGDYLFFHDAGAHGFAMGYNYNGKLWCAE 355 Query: 391 IMV-NGSQFHIIRPRMTFQELIELDSIPAWLQKTPKQS 427 +++ IR + I QK + Sbjct: 356 LLLKEDGTVKCIRRAQRDTDYFATLDIDEDFQKYLQNR 393 >gi|306819518|ref|ZP_07453225.1| diaminopimelate decarboxylase [Mobiluncus mulieris ATCC 35239] gi|304647810|gb|EFM45128.1| diaminopimelate decarboxylase [Mobiluncus mulieris ATCC 35239] Length = 538 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 104/439 (23%), Positives = 162/439 (36%), Gaps = 54/439 (12%) Query: 9 GSLHAENVSLEKL-AHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGM----DTMVCYALKAN 62 G L +L L A TP + K + AF + V YA KA Sbjct: 46 GELRIHGQNLVALLAQQHGRTPVFIMDMDDFRKRARAWREAFTKTFGKGNAQVYYAGKAF 105 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + + G GLD S GEL ALA+ + R+ G GK+ + A+ +GI Sbjct: 106 LCLGLARVATAQGLGLDTASSGELTLALASGIDPLRVGLHGNGKSAALLHQAVSAGIGRI 165 Query: 123 NVESESELKTLNQRAV--SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 ++S +E+ L + P+ R+ ++A H+ I+T ++ KFG+ + Sbjct: 166 IIDSLAEIPRLQRVLDALPQAAMVPVMIRLTTGVHAGGHEYIATAHEDQKFGLSLEPGTH 225 Query: 181 LYAYASTLPGV-------------------------KISGVDMHIGSQIDQIESF-HKAF 214 ++ G+ HIGSQI F A Sbjct: 226 AGLCPDDSDWDGCYVVSPADSPALAAVKLILADDRLELVGLHSHIGSQISAFAGFTAAAQ 285 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGL--------GIAYHSDHRPPSSSDYASLIHQYFGN 266 K++ R G+ + ID+GGG + Sbjct: 286 KIIEFRGAVARETGYLVPEIDLGGGYGVAYTAATPPGMAPHEIAEKLYRAVQDACEQHDQ 345 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSA----------DKTFVILDVAMNDFMRPTL 316 + +EPGR LVA I + +V++IK + +V +D M+D +RP L Sbjct: 346 PLPAVSVEPGRSLVAPTTITLYRVLNIKDQPVGTRLDGSVVYRRYVAVDGGMSDNIRPAL 405 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYG 375 YDA++ + N + +VG CE+GD + N + GDLL + TGAYG Sbjct: 406 YDAHY-TATLANRLSAAPLVATRVVGTHCESGDIVVRNVALPADLTEGDLLAVPMTGAYG 464 Query: 376 AVQSGTYNSRLLIPEIMVN 394 S YN + V Sbjct: 465 WSMSSNYNWFTRPGVLGVW 483 >gi|307701187|ref|ZP_07638209.1| diaminopimelate decarboxylase [Mobiluncus mulieris FB024-16] gi|307613581|gb|EFN92828.1| diaminopimelate decarboxylase [Mobiluncus mulieris FB024-16] Length = 538 Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 104/439 (23%), Positives = 162/439 (36%), Gaps = 54/439 (12%) Query: 9 GSLHAENVSLEKL-AHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGM----DTMVCYALKAN 62 G L +L L A TP + K + AF + V YA KA Sbjct: 46 GELRIHGQNLVALLAQQHGRTPVFIMDMDDFRKRARAWREAFTKTFGKGNAQVYYAGKAF 105 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + + G GLD S GEL ALA+ + R+ G GK+ + A+ +GI Sbjct: 106 LCLGLARVATAQGLGLDTASPGELTLALASGIDPLRVGLHGNGKSAALLHQAVSAGIGRI 165 Query: 123 NVESESELKTLNQRAV--SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 ++S +E+ L + P+ R+ ++A H+ I+T ++ KFG+ + Sbjct: 166 IIDSLAEIPRLQRVLDALPQAATVPVMIRLTTGVHAGGHEYIATAHEDQKFGLSLEPGTH 225 Query: 181 LYAYASTLPGV-------------------------KISGVDMHIGSQIDQIESF-HKAF 214 ++ G+ HIGSQI F A Sbjct: 226 AGLCPDDSDWDGCYVVSPADSPALAAVKLILADDRLELVGLHSHIGSQISAFAGFTAAAQ 285 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGL--------GIAYHSDHRPPSSSDYASLIHQYFGN 266 K++ R G+ + ID+GGG + Sbjct: 286 KIIEFRGAVARETGYLVPEIDLGGGYGVAYTAATPPGMAPHEIAEKLYRAVQDACEQHDQ 345 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSA----------DKTFVILDVAMNDFMRPTL 316 + +EPGR LVA I + +V++IK + +V +D M+D +RP L Sbjct: 346 PLPAVSVEPGRSLVAPTTITLYRVLNIKDQPVGTRLDGSVVYRRYVAVDGGMSDNIRPAL 405 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYG 375 YDA++ + N + +VG CE+GD + N + GDLL + TGAYG Sbjct: 406 YDAHY-TATLANRLSAAPLVATRVVGTHCESGDIVVRNVALPADLTEGDLLAVPMTGAYG 464 Query: 376 AVQSGTYNSRLLIPEIMVN 394 S YN + V Sbjct: 465 WSMSSNYNWFTRPGVLGVW 483 >gi|242010362|ref|XP_002425937.1| Ornithine decarboxylase, putative [Pediculus humanus corporis] gi|212509920|gb|EEB13199.1| Ornithine decarboxylase, putative [Pediculus humanus corporis] Length = 456 Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 81/370 (21%), Positives = 141/370 (38%), Gaps = 17/370 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF+ I K + + F + YA+K N V++ L LGS D S+ EL Sbjct: 35 PFFVCDVGEIVKKFNEWKVKFPRI--QPFYAVKCNDTPIVLEVLGALGSSFDCASKNELS 92 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + L V ++I+F+ K I I A + + ++E+EL + I Sbjct: 93 KVLDLGVDPKKIIFANPCKPISHIRFAESNKVDLITFDNETELYKMKSLFPESRLILRIR 152 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + + KFG + + G+ + G+ H+GS Sbjct: 153 YDAKVAA----------CQLGMKFGCDHQKEAPKLINVARSLGLNVVGLSFHVGSGCGDP 202 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + KA + L ++ G++ +D+GGG H+ + + +F + Sbjct: 203 PVYRKAIAACKTLFDYAKTLGYDFNILDIGGGFPGNKHTSVDEFAEI-INQALEDFFPDP 261 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKK----SADKTFVILDVAMNDFMRPTLYDAYHEI 323 + KII EPGRF+ A LVT V S + + ++ + +YD H Sbjct: 262 EMKIIAEPGRFMAASCFTLVTNVHSKRTVLGENGIHNMYYINDGVYGSFNSIIYDHAHVN 321 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + + +A I GP C+ D + N + GD + E GAY + T+N Sbjct: 322 PIPLRQSNLKNVTYASIWGPTCDGLDQVCDNVLLPELTIGDWIVFEDMGAYTLPGASTFN 381 Query: 384 SRLLIPEIMV 393 + +V Sbjct: 382 GFPVPKVYVV 391 >gi|209526903|ref|ZP_03275422.1| Diaminopimelate decarboxylase [Arthrospira maxima CS-328] gi|209492682|gb|EDZ93018.1| Diaminopimelate decarboxylase [Arthrospira maxima CS-328] Length = 413 Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 94/403 (23%), Positives = 164/403 (40%), Gaps = 22/403 (5%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +KL + +P Y Y+ ++ A + T +A N N A++K GL Sbjct: 25 KKLLDIYGSPLYVYNADILQDTINHIGGAVNYPKTRFKFASVTNGNIALLKIFQQANWGL 84 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 + G+ L A ++IV+SG E L L GI +N++S +L+ + Sbjct: 85 HANTPGDAFLGLKAGFHPQQIVYSGSNLNHREFQLLLNWGITTYNLDSLDQLQLFGEVFQ 144 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 L ++ + + G+ + A+ G+KI+G+ Sbjct: 145 QLKLDFLPKLGFRLNLPE--------INGDSRIGVNPQEFPEAIKIAA-SAGLKITGLHF 195 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + G+ + SF + K L + QQL + Q++D GGG G Y + Sbjct: 196 YRGTGTNATSSFTQVIKPLLAIGQQL----PDWQYLDFGGGFGYPYQHQKSAFDWHFFGQ 251 Query: 259 LIH------QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 I N + +I+EPGR +A G L+T+V+S K K V +D + + Sbjct: 252 QITAELTQLNRELNREIDLIIEPGRSAIASCGTLLTQVVSTKWQPPKQIVGVDTTVANLS 311 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 P++Y Y EI + + H D+ G + D++ NR++ + GD+L I G Sbjct: 312 VPSVYGNYREIV---SFSDTPNHYITDVCGNTTYSRDYLGKNRQLPQLKRGDILAILDCG 368 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 AYG S + R E+++ + +IR R + L+ Sbjct: 369 AYGYAMSSHFLHRPRPAEVLLQQGKHQLIRQREDYNILLTQQV 411 >gi|157117134|ref|XP_001652951.1| ornithine decarboxylase [Aedes aegypti] gi|108876152|gb|EAT40377.1| ornithine decarboxylase [Aedes aegypti] Length = 416 Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 82/423 (19%), Positives = 145/423 (34%), Gaps = 34/423 (8%) Query: 1 MSAFKYF--EGSLHAENVSLEKLAHVVQ--TPFYCYSTTAIEKNYLTFSNAFDGMDTMVC 56 M +Y EG ++ ++ + +P + + + + + ++ Sbjct: 1 MHNIRYNLVEGEFSLDD-AVHSIVARGPQDSPVHILNLDDVVAKHRNWREKLPRVEP--F 57 Query: 57 YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 YA+K N + A+I+TL LG+G D S+ E+ L A++I+++ K++D I A Sbjct: 58 YAVKCNDDPAIIRTLVALGAGFDCASKKEIEMVLKLGGNADKIIYAHTAKSMDSITYAKT 117 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 GI + E EL + + I + + KFG Sbjct: 118 CGISMMTFDGEIELDKIKKLHPEASLVLRIRYD----------SPDAAVSLGKKFGCDPE 167 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + G+ + G+ H+GS E F+ A K R L ++ +D+ Sbjct: 168 HEAPHLLKYAKSLGLSVVGISFHVGSGNKNAECFYGAIKTTRTLFNLASELDFDLSLLDI 227 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 GGG + + +L + ++I EPG + VA LV V S + Sbjct: 228 GGGFPGDHDKPIDTFVKAINLALQRYFPIKSGVRVIAEPGTYYVASAVNLVANVQSKRII 287 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYI---------VNPAGDRLHIHADIVGPICET 347 + M R + GP C++ Sbjct: 288 RSGPQATISEIMYYLNDGMFGSFDWLNPRCYPPVVIPGNPQIVRSRDQFLTTLWGPTCDS 347 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D IA + + GD L GAYG+V S +N + + R T+ Sbjct: 348 TDLIASGWMMEELQIGDFLVFNDMGAYGSVLSTNFNGFAKP--------KMMVYVSRTTY 399 Query: 408 QEL 410 +L Sbjct: 400 DQL 402 >gi|288818467|ref|YP_003432815.1| ornithine decarboxylase [Hydrogenobacter thermophilus TK-6] gi|288787867|dbj|BAI69614.1| ornithine decarboxylase [Hydrogenobacter thermophilus TK-6] gi|308752057|gb|ADO45540.1| Orn/DAP/Arg decarboxylase 2 [Hydrogenobacter thermophilus TK-6] Length = 390 Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 89/367 (24%), Positives = 162/367 (44%), Gaps = 19/367 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP I++ Y + + YA+KAN + +VIK L+ GSG ++ S EL Sbjct: 39 TPLLLLDLEGIKRRYKEIELYMP--NFRIYYAVKANDHTSVIKALSEKGSGFEVASLEEL 96 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 ++ L+ V ERI+ S K+ + ID A + F V+S +E++ + + + Sbjct: 97 KKVLSLKVEPERIISSNPVKSEEFIDYAYSVHVNRFAVDSFTEVEKIAK----------V 146 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A R + + S KFG+ + + YA G+ G+ H+GSQ + Sbjct: 147 AKRARVYVRLVVPNEGSDWPLSKKFGVDVDTAIDILEYARE-KGLVPYGITFHVGSQCNN 205 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYF 264 ++ A + +L ++ + G +Q +++GGG+ + Y + Y ++F Sbjct: 206 YRNWFIAIRKSAELWEKAKRRGFRLQMLNMGGGIPVKYTYEALRIEDIAYYIKGLLQKFF 265 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 N ++ +EPGR +V D GI++T++I K D+ ++ +D + + + L + Sbjct: 266 PNPPHELQIEPGRGIVGDQGIMITRIIGKAKRNDENWLYVDTGVFNGLAEALGGIRYPFY 325 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 + I G C++ D IA + P GD LYI GAY V + +N Sbjct: 326 I----DREGELKEWTIGGVSCDSMDVIAKMVALPEPEVGDHLYILSAGAYTTVYASNFNG 381 Query: 385 RLLIPEI 391 + + Sbjct: 382 FPMPKVL 388 >gi|239994458|ref|ZP_04714982.1| putative diaminopimelate decarboxylase [Alteromonas macleodii ATCC 27126] Length = 245 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 116/239 (48%), Positives = 152/239 (63%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F Y +G LHAE V++ +A TP Y YS +E+++ F++A +VCYA+K Sbjct: 1 MDYFAYSQGQLHAEQVAVSDIAAQHGTPVYIYSRATLERHWHAFNDAIGEHPHLVCYAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LGSG DIVS GEL R + A A ++VFSGVGK DEI ALQ GI Sbjct: 61 ANSNIGVLSVLAKLGSGFDIVSAGELARVIEAGGDASKVVFSGVGKKHDEIRYALQQGIM 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVESE EL +NQ A +G KAPI+ R+NPD++A TH ISTG K +KFGI + + Sbjct: 121 CFNVESEPELHRINQVAGEMGTKAPISLRINPDVDAKTHPYISTGLKANKFGIARERALA 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y A++LP + + G+D HIGSQ+ +I F A + L L +L I+H+DVGGG Sbjct: 181 TYELAASLPHLNVVGMDCHIGSQLTEIGPFVDALERLLLLIDELAERNIIIEHLDVGGG 239 >gi|254393792|ref|ZP_05008907.1| decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|197707394|gb|EDY53206.1| decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 531 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 88/442 (19%), Positives = 151/442 (34%), Gaps = 47/442 (10%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 +P Y Y + A + + Y+LKAN + ++ L G+ ++ Sbjct: 2 VERYGSPLYIYDLARVRAALEDLRAALPQ-PSRIYYSLKANPHPGLVAELRRGGARAEVT 60 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GEL AL A PA +++SG GK E+D A+ +G+ F+ ES +L+ + A + G Sbjct: 61 SRGELAAALEAGHPAAELMYSGPGKVRAELDEAVAAGMRTFSAESFGDLERIGAAAAAQG 120 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 A R+ A + +FG + + A + + Sbjct: 121 VTADCVLRI-NAAGAPGQAGLRMTGGPSQFGFDLDGLTEQRARLLVQGTRIVGMHFFPLT 179 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + D+ + + +R Q G + +D+GGG Y + P + + Sbjct: 180 NARDEAGLLAELAQSVRTAAQLREELGIPLHLLDLGGGFSAPYATPGERPVYRGLRTALS 239 Query: 262 QYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 E GR+LV D G LV V +K S + +LD +N Sbjct: 240 TVLDEHLPGWRDGEPVVAFESGRYLVGDSGRLVVTVTDVKHSRGSDYAVLDSGINHLGGL 299 Query: 315 TLYDAYH--------------------EINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + E + + D + GP+C D +A Sbjct: 300 SGLGRLLPLSAQPLVPPVLPDQGAGAAETDGKTDGETDGEPGTVTLAGPLCTPADILARA 359 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQ----FHIIRPRMTFQE 409 ++ GDLL GAYG S + E++V+G + + R Sbjct: 360 AELPGVAAGDLLVFPNVGAYGLSASLLGFLGHPAPAEVLVDGGETVSATRLALRRQ---- 415 Query: 410 LIELDSIPAWLQKTPKQSSENY 431 +Q P +E + Sbjct: 416 ---------HIQPAPVHRTEEF 428 >gi|269976851|ref|ZP_06183825.1| diaminopimelate decarboxylase [Mobiluncus mulieris 28-1] gi|269934682|gb|EEZ91242.1| diaminopimelate decarboxylase [Mobiluncus mulieris 28-1] Length = 538 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 104/439 (23%), Positives = 162/439 (36%), Gaps = 54/439 (12%) Query: 9 GSLHAENVSLEKL-AHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGM----DTMVCYALKAN 62 G L +L L A TP + K + AF + V YA KA Sbjct: 46 GELRIHGQNLVALLAQQHGRTPVFIMDMDDFRKRARAWREAFTKTFGKGNAQVYYAGKAF 105 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + + G GLD S GEL ALA+ + R+ G GK+ + A+ +GI Sbjct: 106 LCLGLARVATAQGLGLDTASSGELTLALASGIDPLRVGLHGNGKSAALLHQAVSAGIGRI 165 Query: 123 NVESESELKTLNQRAV--SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 ++S +E+ L + P+ R+ ++A H+ I+T ++ KFG+ + Sbjct: 166 IIDSLAEIPRLQRVLDALPQAATVPVMIRLTTGVHAGGHEYIATAHEDQKFGLSLEPGTH 225 Query: 181 LYAYASTLPGV-------------------------KISGVDMHIGSQIDQIESF-HKAF 214 ++ G+ HIGSQI F A Sbjct: 226 AGLCPDDSDWDGCYVVSPADSPALAAVKLILADDRLELVGLHSHIGSQISAFAGFTAAAQ 285 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGL--------GIAYHSDHRPPSSSDYASLIHQYFGN 266 K++ R G+ + ID+GGG + Sbjct: 286 KIIEFRGAVARETGYLVPEIDLGGGYGVAYTAATPPGMAPHEIAEKLYRAVQDACEQHDQ 345 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSA----------DKTFVILDVAMNDFMRPTL 316 + +EPGR LVA I + +V++IK + +V +D M+D +RP L Sbjct: 346 PLPAVSVEPGRSLVAPTTITLYRVLNIKDQPVGTRLDGSVVYRRYVAVDGGMSDNIRPAL 405 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYG 375 YDA++ + N + +VG CE+GD + N + GDLL + TGAYG Sbjct: 406 YDAHY-TATLANRLSAAPLVATRVVGTHCESGDIVVRNVALPADLTEGDLLAVPMTGAYG 464 Query: 376 AVQSGTYNSRLLIPEIMVN 394 S YN + V Sbjct: 465 WSMSSNYNWFTRPGVLGVW 483 >gi|227876243|ref|ZP_03994359.1| diaminopimelate decarboxylase [Mobiluncus mulieris ATCC 35243] gi|227843204|gb|EEJ53397.1| diaminopimelate decarboxylase [Mobiluncus mulieris ATCC 35243] Length = 538 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 104/439 (23%), Positives = 162/439 (36%), Gaps = 54/439 (12%) Query: 9 GSLHAENVSLEKL-AHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGM----DTMVCYALKAN 62 G L +L L A TP + K + AF + V YA KA Sbjct: 46 GELRIHGQNLVALLAQQHGRTPVFIMDMDDFRKRARAWREAFTKTFGKGNAQVYYAGKAF 105 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + + G GLD S GEL ALA+ + R+ G GK+ + A+ +GI Sbjct: 106 LCLGLARVATAQGLGLDTASSGELTLALASGIDPLRVGLHGNGKSAALLHQAVSAGIGRI 165 Query: 123 NVESESELKTLNQRAV--SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 ++S +E+ L + P+ R+ ++A H+ I+T ++ KFG+ + Sbjct: 166 IIDSLAEIPRLQRVLDALPQAATVPVMIRLTTGVHAGGHEYIATAHEDQKFGLSLEPGTH 225 Query: 181 LYAYASTLPGV-------------------------KISGVDMHIGSQIDQIESF-HKAF 214 ++ G+ HIGSQI F A Sbjct: 226 AGLCPDDSDWDGRYAVSPADSPALAAVKLILADDRLELVGLHSHIGSQISAFAGFTAAAQ 285 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGL--------GIAYHSDHRPPSSSDYASLIHQYFGN 266 K++ R G+ + ID+GGG + Sbjct: 286 KIIEFRGAVARETGYLVPEIDLGGGYGVAYTAATPPGMAPHEIAEKLYRAVQDACEQHDQ 345 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSA----------DKTFVILDVAMNDFMRPTL 316 + +EPGR LVA I + +V++IK + +V +D M+D +RP L Sbjct: 346 PLPAVSVEPGRSLVAPTTITLYRVLNIKDQPVGTRLDGSVVYRRYVAVDGGMSDNIRPAL 405 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYG 375 YDA++ + N + +VG CE+GD + N + GDLL + TGAYG Sbjct: 406 YDAHY-TATLANRLSAAPLVATRVVGTHCESGDIVVRNVALPADLTEGDLLAVPMTGAYG 464 Query: 376 AVQSGTYNSRLLIPEIMVN 394 S YN + V Sbjct: 465 WSMSSNYNWFTRPGVLGVW 483 >gi|85059966|ref|YP_455668.1| diaminopimelate decarboxylase [Sodalis glossinidius str. 'morsitans'] gi|84780486|dbj|BAE75263.1| diaminopimelate decarboxylase [Sodalis glossinidius str. 'morsitans'] Length = 419 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 105/390 (26%), Positives = 167/390 (42%), Gaps = 27/390 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L P + Y I FD + +A KA SN +++ + G +D Sbjct: 20 LHQRYGGPVWVYEAETISALIAQLRR-FD----TIRFAQKACSNIHLLRLMRSQGVKVDS 74 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS GE+ RAL A + T D +D + + + + + + + Sbjct: 75 VSLGEIERALLAGFLP-GTENDEIVFTADLLDEPTLARVVELGIPVNAGSTDMLAQLGAR 133 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + R+NP +K +TG + K GI + A G+++ G+ MHI Sbjct: 134 SPGHGVWLRINPGFGHGHSQKTNTGGENSKHGIWYEDLPQAVALIQH-DGLRLIGIHMHI 192 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 GS + + ++ + QQ+ ++G ++ I GGGL I Y S + Y L Sbjct: 193 GSGV----DYDHLSQVCDAMVQQVMASGLDLAAISAGGGLSIPYRSGEEAIDTEHYFGLW 248 Query: 261 HQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + +EPGRFLVA+ G+L+T+V ++K + FV++D ND MRP Sbjct: 249 DAARRRISSHLGHPVTLEIEPGRFLVAESGVLITQVRAVKDMGSRHFVLVDAGFNDLMRP 308 Query: 315 TLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIAL-------NRKIALPRPGD 364 +Y +YH I G + + GP+CE+GD R++ L + GD Sbjct: 309 AMYGSYHAISLLPADGRDRGAQPLRETVVGGPLCESGDVFTQTAGGGIAPRRLPLAQVGD 368 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVN 394 L TGAYGA S YNSR L+PE++ Sbjct: 369 YLVFHDTGAYGASMSSNYNSRPLLPEVLFE 398 >gi|163783584|ref|ZP_02178574.1| ornithine decarboxylase [Hydrogenivirga sp. 128-5-R1-1] gi|159881204|gb|EDP74718.1| ornithine decarboxylase [Hydrogenivirga sp. 128-5-R1-1] Length = 390 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 86/376 (22%), Positives = 155/376 (41%), Gaps = 19/376 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +L V TP ++ ++ ++ V YA+KAN + +++ LA +G+G Sbjct: 30 LAELIDKVDTPALLMDLEGVKTRFVDVRYHLPEVN--VFYAVKANDHIDILRALAEVGAG 87 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 ++ S EL + L+ V ER++ S K +D ID A G+ F V+S E+ + + A Sbjct: 88 FEVASSEELGKVLSLGVQPERVISSNPVKPLDFIDYAYGVGVNRFAVDSFPEVDKIARAA 147 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + S KFG+ ++ + YA V G+ Sbjct: 148 PRARVYVRLTV----------PNEGSEWPLSRKFGVDVNTAVEILEYAKNRGLV-PIGLT 196 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 H+GSQ + + ++ A K L + R G + +++GGG+ + Y + Y Sbjct: 197 FHVGSQCNNLRNWFIAIKRSAQLWEAARLKGIRLLVLNMGGGIPVRYLQESLSVEDIAYY 256 Query: 258 SLI--HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +YF ++ +EPGR +V D GI+V V+ ++ ++ +D + + + Sbjct: 257 VRGLLRKYFPTSPYELQIEPGRGIVGDQGIMVVGVVGTATRGEENWLYIDTGVFNGLAEA 316 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 L + + I G C++ D +A + P GD L+I GAY Sbjct: 317 LGGIRYP----TYLKREGELKEWVIGGISCDSMDVVAKRVFLPEPAVGDRLFILSAGAYT 372 Query: 376 AVQSGTYNSRLLIPEI 391 V +N I Sbjct: 373 TVYGANFNGFPPPKVI 388 >gi|307320235|ref|ZP_07599654.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Sinorhizobium meliloti AK83] gi|306894114|gb|EFN24881.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Sinorhizobium meliloti AK83] Length = 408 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 101/411 (24%), Positives = 167/411 (40%), Gaps = 23/411 (5%) Query: 1 MSA------FKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDT 53 M++ F L + + +LA V TPF+ Y I + D Sbjct: 1 MNSHPTIALFDVVGNWLSVGGIPINRLAECVGGTPFFAYDRRLITSRVKFLRSVLP-SDI 59 Query: 54 MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 + YA+KAN AV++ LA L D+ S E++ AL P PA I F+G GKT+ E+ Sbjct: 60 HLSYAVKANPMPAVVQHLARLVDAFDVASTTEMKTALDTPTPASHISFAGPGKTVVELTQ 119 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 A+ +G+ E + + LG + +A R+NPD G + +FGI Sbjct: 120 AVAAGVTIEIESPT-EAARVVEVGSRLGIRPRVALRINPDFQIKGSGMRMGGGPQ-QFGI 177 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-Q 232 + +I SL + G + GSQ + +A L +L + Sbjct: 178 DVEEIPSLLQKLAAAEL-DFLGFHVFSGSQNLHADILCEASAKHVSLLIRLAGECPWPVR 236 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYA------SLIHQYFGNLQCKIILEPGRFLVADVGIL 286 ++++GGG GI Y RP ++++E GR+LV + G+ Sbjct: 237 YLNLGGGFGIPYFEKDRPLDLLAIGATLSDLMECAVRPNLPDARVVIELGRYLVGESGVY 296 Query: 287 VTKVISIKKSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVG 342 VT+V+ K S K ++++D ++ + + N + + +VG Sbjct: 297 VTRVVDRKVSRGKVYLVVDGGLHHQLAASGNFGQVIRRNYPIAVANRMKETELENVSVVG 356 Query: 343 PICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIM 392 +C D + N + GDLL + + GAYG S T + L EI+ Sbjct: 357 CLCTPLDMLGDNITLPRADIGDLLVVFQAGAYGLTASPTAFLGHPLPVEIL 407 >gi|281211064|gb|EFA85230.1| group IV decarboxylase [Polysphondylium pallidum PN500] Length = 436 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 79/385 (20%), Positives = 139/385 (36%), Gaps = 29/385 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + + YA+K N ++K L LG+ D S E+ Sbjct: 65 FFVADIGVIIKQWQKWVKHLP--NVTPFYAVKCNPTMGILKVLEALGTSFDCASRTEIES 122 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ V RI+++ K I I A + + ++ SEL+ + + IA Sbjct: 123 VLSMGVDPSRIIYANPCKQITAIKYARTNNVKLMTFDNLSELEKIEKFFPEAELVLRIAP 182 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S + KFG+ I L A + +K+ GV H+GS Sbjct: 183 D----------DSKSLMRFGTKFGVHIDDCSDLLEMAKEM-NLKVVGVSFHVGSGCFDAS 231 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A +++R + +++G + +D+GGG + + + + Sbjct: 232 AYDTALEMVRKVFDMAKTHGMELNLVDIGGGFTGSNDEMFGKFT--EVIRKKTAELFDSS 289 Query: 269 CKIILEPGRFLVADVGILVTKVISIK-KSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 +II EPGR+ A L VIS + + N+ + Y A Sbjct: 290 VRIIAEPGRYFAAMSHTLAVTVISKRSIKQEDNRQHPRRTSNNMRQYNYYLADGVYGSFN 349 Query: 328 NPAGD-------------RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 N D + + GP C++ D IA + ++ + GD LY GAY Sbjct: 350 NIQFDHAKPTALLLKPTNKAPTPCTLFGPTCDSIDVIAKDTQLPELKIGDWLYFPDMGAY 409 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFH 399 + ++N P S+ Sbjct: 410 TTASASSFNGFCPPPVYYYCNSELE 434 >gi|296124036|ref|YP_003631814.1| ornithine decarboxylase [Planctomyces limnophilus DSM 3776] gi|296016376|gb|ADG69615.1| Ornithine decarboxylase [Planctomyces limnophilus DSM 3776] Length = 392 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 92/379 (24%), Positives = 163/379 (43%), Gaps = 17/379 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++LA TP C S + + +NY G + YA K+N + +++TL LG + Sbjct: 28 KELAAEYGTPLMCVSRSVVARNYEILQAGLPG--VELFYAAKSNPDLTILRTLRRLGGSV 85 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 DI S GEL+ AL A E+++ + KT+D + ++G+ F ++ +ELK +++ Sbjct: 86 DICSVGELKAALQAGFTPEQMLHTHPCKTVDNLMTCYEAGVRLFVYDNATELKKVHRLTP 145 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 +G +A S KFG + L A L + G+ Sbjct: 146 DVGLLLRVAMSSAS----------SMINLSAKFGCAPSEAVDLLRQARELGM-NVRGISF 194 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP--SSSDY 256 H+GSQ + + +A +R + G +++ +D+GGG+ Y Sbjct: 195 HVGSQTLEPGDYDRALAKVRQIFDDAACEGIDLEILDIGGGMPAPYREAIISLETYCDIV 254 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK-KSADKTFVILDVAMNDFMRPT 315 + +FG+L ++I EPGR + AD L+T VI + T I+D + Sbjct: 255 RQSLEIHFGDLPVRVIAEPGRVISADTQTLITSVIGKSVRPNGATQYIIDDGLYGSFSGK 314 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 +YD N DR + GP C++ D ++ ++++ G+L+ + G+Y Sbjct: 315 VYDHTDFNLMAENHL-DRPCFPCVVAGPTCDSTDVVSRDQELPNLEIGELILVPSMGSYT 373 Query: 376 AVQSGTYNSRLLIPEIMVN 394 T+N L+ I V Sbjct: 374 NASGSTFNGLDLVKAIGVE 392 >gi|300676948|gb|ADK26819.1| ornithine decarboxylase 1 [Zonotrichia albicollis] Length = 460 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 94/416 (22%), Positives = 147/416 (35%), Gaps = 41/416 (9%) Query: 1 MSAFKYFEGSLHA--ENVSLEKLAHV----VQT-----PFYCYSTTAIEKNYLTFSNAFD 49 MS F E L E + + + V + FY I K ++ + A Sbjct: 1 MSNFSKEEFELTFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDIVKKHMRWHKALP 60 Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 YA+K N ++AV+KTLA LG+G D S+ E++ + VP ERI+++ K + Sbjct: 61 R--VTPFYAVKCNDSKAVVKTLAVLGAGFDCASKTEIQLVQSIGVPPERIIYANPCKQVS 118 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 +I A SG+ +SE EL + + I T + + Sbjct: 119 QIKHAASSGVQMMTFDSEVELMKVARAHPKAKLVLRIT----------TDDSKAVCRLSV 168 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 KFG + L A L I GV H+GS E+F +A R + G Sbjct: 169 KFGATLKTSRLLLERAKELDLA-IVGVSFHVGSGCTDPETFVQAISDARCVFDMGAELGF 227 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILV 287 N+ +D+GGG + + + + + + II EPGR+ VA L Sbjct: 228 NMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGINIIAEPGRYYVASAFTLA 287 Query: 288 TKV---------------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 + + + D F A+ + P D Sbjct: 288 VNIIAKKIVLKEQTGSDDEDDTNDKTLMYYVNDGVYGSFNCILYDHAHVKPVLQKRPKPD 347 Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 I GP C+ D I + + GD + E GAY + T+N Sbjct: 348 DSCYSCSIWGPTCDGLDRIVERFNMPELQVGDWILFENMGAYTVAAASTFNGFQRP 403 >gi|67923188|ref|ZP_00516676.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Crocosphaera watsonii WH 8501] gi|67854974|gb|EAM50245.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Crocosphaera watsonii WH 8501] Length = 404 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 84/398 (21%), Positives = 164/398 (41%), Gaps = 16/398 (4%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L + +P Y Y + + + + +T+ +A N N ++K G G+ Sbjct: 20 LLNCYGSPLYVYQSDLLRHGISHITTSIPYNNTLFQFATVTNGNIELLKLFNDQGWGIHA 79 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 + G++ L A E+IV+SG +E+ L+ G+ N++S S+L+ L + S Sbjct: 80 NTPGDIYLGLKAGFSGEKIVYSGSNLNPEEMTQILKWGVRTLNLDSISQLELLYEIYKSF 139 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + K+ + G+ + A + I G+ + Sbjct: 140 PGD-------LSSLKLGLRLNEPNLIKDSRIGVQPQEFPEAIKIAKRVGL-NIQGLHFYR 191 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS-- 258 G+ + +AF + D Q+ N +++D GGG G YH D + + Sbjct: 192 GTGT----NATRAFTKVIDDIIQIGQLLPNWEYLDFGGGFGYPYHHDKIAFNWHKFGQEL 247 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + ++I+EPGR ++A+ L+ KV+S+K DK + +D + + P+++ Sbjct: 248 TDKLNQLSKPIQLIIEPGRAVIANCATLLAKVVSVKWQGDKQIIGVDTTVGNLSVPSVHG 307 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 Y +I + D+ G + D++ N ++ GD++ I + GAYG Sbjct: 308 GYRKIISWPE--KSQTLWLTDVCGNTTYSRDYLGKNCQLPALEIGDIIGILEVGAYGYAM 365 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 S + R E+++ +IR R +Q LI+ + Sbjct: 366 SSHFLHRPRPAEVLLEKESHRLIRQREDYQVLIDNQIL 403 >gi|224048733|ref|XP_002198114.1| PREDICTED: ornithine decarboxylase 1 [Taeniopygia guttata] Length = 460 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 93/416 (22%), Positives = 147/416 (35%), Gaps = 41/416 (9%) Query: 1 MSAFKYFEGSLHA--ENVSLEKLAHV----VQT-----PFYCYSTTAIEKNYLTFSNAFD 49 MS F E L E + + + V + FY I K ++ + A Sbjct: 1 MSNFSKEEFELTFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDIVKKHVRWHKALP 60 Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 YA+K N ++AV+KTLA LG+G D S+ E++ + VP ERI+++ K + Sbjct: 61 R--VTPFYAVKCNDSKAVVKTLAVLGAGFDCASKTEIQLVQSIGVPPERIIYANPCKQVS 118 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 +I A SG+ +SE EL + + I T + + Sbjct: 119 QIKHAASSGVQMMTFDSEVELMKVARAHPKAKLVLRIT----------TDDSKAVCRLSV 168 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 KFG + L A L I GV H+GS E+F +A R + G Sbjct: 169 KFGATLKTSRLLLERAKELDLA-IVGVSFHVGSGCTDPETFVQAISDARCVFDMGAELGF 227 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILV 287 ++ +D+GGG + + + + + + II EPGR+ VA L Sbjct: 228 SMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGINIIAEPGRYYVASAFTLA 287 Query: 288 TKV---------------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 + + + D F A+ + P D Sbjct: 288 VNIIAKKIVLKEQTGSDDEDDANDKTLMYYVNDGVYGSFNCILYDHAHVKPVLQKRPKPD 347 Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 I GP C+ D I + + GD + E GAY + T+N Sbjct: 348 DSCYSCSIWGPTCDGLDRIVERFNMPELQVGDWILFENMGAYTVAAASTFNGFQRP 403 >gi|170049417|ref|XP_001855927.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167871262|gb|EDS34645.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 436 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 84/424 (19%), Positives = 156/424 (36%), Gaps = 37/424 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQT------PFYCYSTTAIEKNYLTFSNAFDGMDTM 54 M +Y +L ++ S++ + +V + P + + + + +D Sbjct: 22 MRKIRY---NLLEDDASVKDVIELVVSQGPKDEPVHILDLDDVVAKHQNWRRKLPRVDP- 77 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 YA+K N + A+++TL LG+G D S+ E+ L RI+++ K+ID + A Sbjct: 78 -FYAVKCNDDPAIVQTLIALGAGFDCASKAEIELVLQRGGDPSRIIYAHTAKSIDSLVYA 136 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 GI + E EL +NQ I + KFG Sbjct: 137 KACGINLMTFDGEIELDKINQVHPEASLVLRIHYDSANA----------QVSLGKKFGCD 186 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + G+ + G+ H+GS E F+ A K + L +S G++++ + Sbjct: 187 PEHEAPQLLRYAKSLGLSVVGISFHVGSGNSDHECFYGAIKAAKKLFDYAQSLGYDLRLL 246 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 D+GGG + P +++ +L + ++I EPG + VA L+ V S + Sbjct: 247 DIGGGYPGDHDKPIDPYATTINGALQRFFPLKTNVRVIAEPGTYYVASAVTLIANVQSKR 306 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA--------DIVGPICE 346 + ++ + + GP C+ Sbjct: 307 IVRTPQGTVRELMYYLNDGLFGSFDWLNPRKYPPQVIPGNRQLVRSRELFLTTLWGPTCD 366 Query: 347 TGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMT 406 + D I + + GD L + GAYG V + +N +MV I R + Sbjct: 367 STDLILSGMAMEELQIGDFLVFDDMGAYGTVLATNFNGFAKPK-VMVY------ISRR-S 418 Query: 407 FQEL 410 +++L Sbjct: 419 WEQL 422 >gi|78484619|ref|YP_390544.1| ornithine decarboxylase [Thiomicrospira crunogena XCL-2] gi|78362905|gb|ABB40870.1| ornithine decarboxylase [Thiomicrospira crunogena XCL-2] Length = 398 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 73/379 (19%), Positives = 139/379 (36%), Gaps = 16/379 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L L +TPF +E Y A G + YA+K+ ++ AVI+ L LG Sbjct: 27 LRDLLTQHETPFLVLDLQEVEYQYSALQKALPG--VELFYAIKSLAHPAVIRRLKKLGGS 84 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+ + GE+ + + + + K EI AL G F V++ E+ Sbjct: 85 FDLATSGEVDLVKGLGIEGHQCIHTHPIKKDREIRHALDFGCTRFVVDNPDEVLKFIPYK 144 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + ++FR I KFG + ++ L A ++ Sbjct: 145 DEVELMIRVSFRSQDAI----------VDLSRKFGSALEELPGLVNLAMENG---LTVSG 191 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + F + + ++ + + + +D+GG ++Y P Sbjct: 192 LSFHVGSQSLSPFAQVNAVQASISAMKEMSHVHWKWLDIGGSFPVSYQGPVMPIEDFCAP 251 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + K+ EPGRF+ A I V +V+ K +T+ LD + + +Y Sbjct: 252 IMEALTELPASVKVFAEPGRFISAPSMIEVIRVVGKAKRGARTWYYLDDGVYGALSGQMY 311 Query: 318 DA-YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 D + I + + + GP C++ D + + ++ GD+L ++ GAY Sbjct: 312 DHAKYPIAPLKPVDPTGDFYPSVLAGPTCDSVDVVDEDIELPELAVGDILIAKQMGAYTI 371 Query: 377 VQSGTYNSRLLIPEIMVNG 395 + +N ++V Sbjct: 372 ASASEFNYYPKPKIVVVED 390 >gi|320165468|gb|EFW42367.1| bifunctional aspartate kinase/diaminopimelate decarboxylase [Capsaspora owczarzaki ATCC 30864] Length = 1083 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 100/376 (26%), Positives = 155/376 (41%), Gaps = 17/376 (4%) Query: 28 PFYCYSTTAIEKNYLTFSN--AFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 P Y Y+ +AI ++ S A + YA+KANSN+ V+ +A LG GL+ VS GE Sbjct: 710 PLYVYAESAIRRSASELSQLTALS----RLFYAMKANSNRQVLDLVASLGLGLECVSLGE 765 Query: 86 LRRALAAPVPAERIVFSGV------GKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 + A + + + NV + ++ S Sbjct: 766 VELAREVLSSLGPAAAANGTAAPIFFTPNFVQRSEYEGALAFSNVLVNVDSMYPLRQWTS 825 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 I R++P + A H + TG KFGI + A + + G+ H Sbjct: 826 TFAGQSIMLRIDPGVGAGHHDHVKTGGAASKFGISS-ADLAECAALCAEHRINVVGLHAH 884 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 GS I + L I ++ G G+ + + L Sbjct: 885 AGSGILDPHQWV-LHAELLASHAMRHFPRATILNLGGGVGVNPQCPQSDAFNFAQLNSLL 943 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + Q K+ +EPGRF+VA G+L+ +V +K + TFV L+ M++ +RP LY A Sbjct: 944 TAFSEKHPQFKLWMEPGRFVVAPSGVLLARVSQVKSKSGVTFVGLNAGMHNLIRPALYSA 1003 Query: 320 YH--EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGA 376 YH GDR + +VGPICE+GD + +R + D++ IE GAYG Sbjct: 1004 YHGIHNISRFGMDGDRDTMSCVVVGPICESGDVLGRDRVLPASTSEDDVILIECVGAYGR 1063 Query: 377 VQSGTYNSRLLIPEIM 392 + TYN R + EI+ Sbjct: 1064 SMASTYNLRPVASEIL 1079 >gi|289667155|ref|ZP_06488230.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 711 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 114/387 (29%), Positives = 181/387 (46%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + + +D YA+KAN++ A++ L Sbjct: 335 HAERTHLLSLSKA-GTPRYAYHLPTVRERAHALAQ-IAAVDQR-YYAIKANAHPAILIAL 391 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GELRR A R++F+ E + A G+ E Sbjct: 392 EQAGFGLECVSHGELRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVE-- 449 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + L + I R++ H+K++TG K KFG+ ++ A TL Sbjct: 450 ---ALRNWPQLFRGRNIWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVEVARTLE 506 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 507 VT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 561 Query: 250 PPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + ++ +EPGR+LVA+ G+L+ V + + V LD M Sbjct: 562 PFDLDVWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLIASVTQVIEKDGVERVGLDAGM 621 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLY 367 N MRP LYDA+H+I + DIVGPICE+ D R++ PGD++ Sbjct: 622 NTLMRPALYDAWHDIENLSRLDAPAD-GTFDIVGPICESSDVFGKRRRLPSATAPGDVVL 680 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + TGAYG + TYN R L E +++ Sbjct: 681 VADTGAYGYSMASTYNQRELPREEVID 707 >gi|149640409|ref|XP_001508616.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 533 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 80/372 (21%), Positives = 139/372 (37%), Gaps = 22/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF + + + F A G M Y++K N++ V++ L LG+G D S+ EL Sbjct: 106 PFLVADLGELVRKHQAFLQALPG--VMPFYSVKCNNSPWVLQILKSLGTGFDCASQAELE 163 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + L VPA RI+++ K I A G+ +SE EL + + I Sbjct: 164 QVLGLGVPATRIIYANPCKQTSHIQYAASQGVQLMTFDSEGELTKVAKFHPGARMVLRIR 223 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S KFG + Q L A A L + GV H+GS ++ Sbjct: 224 ----------TEDSKSLHPLSTKFGASLEQSRRLLAVARNLNIA-VIGVCFHVGSACQRV 272 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFG 265 +++ +A + + R GH + +D+GGG ++ H + Sbjct: 273 QNYEEAIADAHRVFEMGRQEGHEMHFLDIGGGFPGTESFVPTFEEMAEGIRTALAHYFPE 332 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIK------KSADKTFVILDVAMNDFMRPTLYDA 319 +II EPGR+ V + +I+ K + + D F ++ D Sbjct: 333 GCGTEIIAEPGRYYATSVYVSALNIIAKKATVEKGGCRKMMYYLNDGCYGLFQMSSMEDP 392 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIA-LNRKIALPRPGDLLYIEKTGAYGAVQ 378 + + + + + GP C+ D I+ + + GD L + G+Y Sbjct: 393 KLKPVVMKTFSSEPPLYPCILWGPTCDAMDKISQEDILLPELEVGDWLVFKNMGSYSLTM 452 Query: 379 SGTYNSRLLIPE 390 ++N + Sbjct: 453 FSSFNGFPMPSV 464 >gi|300676855|gb|ADK26730.1| ornithine decarboxylase 1 [Zonotrichia albicollis] Length = 460 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 94/416 (22%), Positives = 147/416 (35%), Gaps = 41/416 (9%) Query: 1 MSAFKYFEGSLHA--ENVSLEKLAHV----VQT-----PFYCYSTTAIEKNYLTFSNAFD 49 MS F E L E + + + V + FY I K ++ + A Sbjct: 1 MSNFSKEEFELTFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDIVKKHMRWHKALP 60 Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 YA+K N ++AV+KTLA LG+G D S+ E++ + VP ERI+++ K + Sbjct: 61 R--VTPFYAVKCNDSKAVVKTLAVLGAGFDCASKTEIQLVQSIGVPPERIIYANPCKQVS 118 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 +I A SG+ +SE EL + + I T + + Sbjct: 119 QIKHAASSGVQMMTFDSEVELMKVARAHPKAKLVLRIT----------TDDSKAVCRLSV 168 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 KFG + L A L I GV H+GS E+F +A R + G Sbjct: 169 KFGATLKTSRLLLERAKELDLA-IVGVSFHVGSGCTDPETFVQAISDARCVFDMAAELGF 227 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILV 287 N+ +D+GGG + + + + + + II EPGR+ VA L Sbjct: 228 NMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGINIIAEPGRYYVASAFTLA 287 Query: 288 TKV---------------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 + + + D F A+ + P D Sbjct: 288 VNIIAKKIVLKEQTGSDDEDDANDKTLMYYVNDGVYGSFNCILYDHAHVKPVLQKRPKPD 347 Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 I GP C+ D I + + GD + E GAY + T+N Sbjct: 348 DSCYSCSIWGPTCDGLDRIVERFNMPELQVGDWILFENMGAYTVAAASTFNGFQRP 403 >gi|213401143|ref|XP_002171344.1| ornithine decarboxylase [Schizosaccharomyces japonicus yFS275] gi|211999391|gb|EEB05051.1| ornithine decarboxylase [Schizosaccharomyces japonicus yFS275] Length = 431 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 82/368 (22%), Positives = 136/368 (36%), Gaps = 29/368 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + YA+K N + V+ L G+G D S+GEL++ Sbjct: 69 FFVADLAEVYRQLVRWHTNLPR--VQPFYAVKCNPDPRVLALLVKFGTGFDCASKGELQQ 126 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ V ERIV++ K I+ I A + + ++ EL Q + I Sbjct: 127 ILSLGVSPERIVYANPCKAINYIRYARNNNVDFMTFDNTEELYKCKQHHPNARLLLRI-- 184 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +T+ + S + KFG P+ + L A TL + + GV H+GS Sbjct: 185 --------STNDENSICRLSLKFGAPMSETEELLRVAKTLD-LNVVGVSFHVGSGNLDPA 235 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 SF A R + Q G + +D+GGG Sbjct: 236 SFIDAICRSRVVFDQGERYGFHFNTLDIGGGFMSDSFEQTAAILREQL-----DTHFPAN 290 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN---- 324 +II EPGRF VA L V++ ++ ++ V+ V + H+ Sbjct: 291 VRIIAEPGRFFVATAFTLAVNVVAKRRIPEENKVMYYVNDGVYGSLNCILFDHQHPVARV 350 Query: 325 ------YIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAV 377 N I GP C++ D IA + ++ GD +Y + GAY Sbjct: 351 LKHAGRMCYNQYVGTGDHVCSIWGPTCDSLDVIASDARLPFELEVGDWIYFDDAGAYTVA 410 Query: 378 QSGTYNSR 385 + ++N Sbjct: 411 AASSFNGF 418 >gi|289664589|ref|ZP_06486170.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 869 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 114/387 (29%), Positives = 181/387 (46%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + + +D YA+KAN++ A++ L Sbjct: 493 HAERTHLLSLSKA-GTPRYAYHLPTVRERAHALAQ-IAAVDQR-YYAIKANAHPAILIAL 549 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GELRR A R++F+ E + A G+ E Sbjct: 550 EQAGFGLECVSHGELRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVE-- 607 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + L + I R++ H+K++TG K KFG+ ++ A TL Sbjct: 608 ---ALRNWPELFRGRNIWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVEVARTLE 664 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 665 VT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 719 Query: 250 PPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + ++ +EPGR+LVA+ G+L+ V + + V LD M Sbjct: 720 PFDLDVWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLIASVTQVIEKDGVERVGLDAGM 779 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLY 367 N MRP LYDA+H+I + DIVGPICE+ D R++ PGD++ Sbjct: 780 NTLMRPALYDAWHDIENLSRLDAPAD-GTFDIVGPICESSDVFGKRRRLPSATAPGDVVL 838 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + TGAYG + TYN R L E +++ Sbjct: 839 VADTGAYGYSMASTYNQRELPREEVID 865 >gi|83816719|ref|YP_444447.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Salinibacter ruber DSM 13855] gi|83758113|gb|ABC46226.1| diaminopimelate decarboxylase [Salinibacter ruber DSM 13855] Length = 870 Score = 170 bits (431), Expect = 4e-40, Method: Composition-based stats. Identities = 107/380 (28%), Positives = 165/380 (43%), Gaps = 17/380 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L +LA ++P Y Y + G YA+KAN + V++ L G Sbjct: 500 ALLRLADD-ESPRYVYDPEVVTARSDEVQGL--GPIDQSFYAVKANPHPEVLRLLERRGL 556 Query: 77 GLDIVSEGELRRALAAPV--PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G + VS GEL R A R++F E A + G++ Sbjct: 557 GFECVSPGELDRVFEACPGLDPARVLFQPNFAAPAEYADAFERGVHVTVDNV-----QPL 611 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + RV+P H+K+ T + KFG+ A G + Sbjct: 612 AEHPDVFAGEELFVRVDPGQGEGHHRKVRTAGAQSKFGVVPD-DLGRLRAAVDQAGATVV 670 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY-HSDHRPPSS 253 G+ H+GS I ++ LL L + ++ ++VGGGLG+ Sbjct: 671 GLHAHVGSGITDESTWAGLVDLLASLAAEF----PAVRALNVGGGLGVPNASGGRPLDLD 726 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + A+L + Q + +EPGR+LVA+ G+L+ +V K +V LD MN +R Sbjct: 727 ALDAALGKAAARHPQYDLWMEPGRYLVAEAGVLLARVTQTKTKDAAAYVGLDTGMNSLLR 786 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P LY A+HEI + + + AD+VGP+CETGD + +R++ PGD L + TGA Sbjct: 787 PALYGAHHEIVNLSR-LDEPPAMTADVVGPVCETGDVLGHDRRLPPTEPGDTLLVATTGA 845 Query: 374 YGAVQSGTYNSRLLIPEIMV 393 YGA S YN R E+M+ Sbjct: 846 YGASMSNRYNLREPASEVML 865 >gi|313680960|ref|YP_004058699.1| diaminopimelate decarboxylase [Oceanithermus profundus DSM 14977] gi|313153675|gb|ADR37526.1| diaminopimelate decarboxylase [Oceanithermus profundus DSM 14977] Length = 394 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 112/403 (27%), Positives = 189/403 (46%), Gaps = 24/403 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L V TPFY Y IE+ + AF V YALKAN +++ L G Sbjct: 12 ALHDLLGRVPTPFYAYDLRRIEERTRRYLEAFP--TARVFYALKANPRLRLLERLRSQGL 69 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G + VS GE+ RA A + +V +G K + + +SG+ +S ++L+ + QR Sbjct: 70 GAEAVSLGEVVRAYVAGFMPDEVVLNGPVKPPEVLGELARSGVPTLVADSRADLERIAQR 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 +A + R+NPD+ +TH ++TG+ + +FG+ ++A L ++ G+ Sbjct: 130 ----LPEARVLLRLNPDLPVDTHPHLATGRGDSQFGVLPEDWPDVFARGRELGL-EMRGL 184 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +H+GS + F ++L Q+LR ++ +D+GGG G+ P Sbjct: 185 HVHLGSNLHNPADFAARLEVL----QRLRERVGPLEVLDLGGGFGLDLDPRDLAPGMFAL 240 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 A ++ +EPGR LVAD G+LV +V + K++ + +++LD M F+RP L Sbjct: 241 ARA-------YGAELWIEPGRALVADAGVLVARVWAEKRTR-RRYLLLDAGMTAFLRPLL 292 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 Y A H + + D+ GP CE+GD +A + ++ +PR GD + + GAYG Sbjct: 293 YGARHPVRPLY---ASERTAVYDLAGPACESGDVLARDVELPVPREGDAVAFLEAGAYGE 349 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 Y +G+++ + R L E + P Sbjct: 350 AMHLDYLDHPRPGAYAWDGARWEVWRRPGRLPALWEDE--PDR 390 >gi|62858211|ref|NP_001015993.1| arginine decarboxylase [Xenopus (Silurana) tropicalis] gi|89271304|emb|CAJ82977.1| ornithine decarboxylase-2 [Xenopus (Silurana) tropicalis] Length = 458 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 91/379 (24%), Positives = 150/379 (39%), Gaps = 30/379 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + K +L F A + YA+K NS++ V+K LA LG+G D S+ E+ Sbjct: 39 FFVADLGDVVKKHLRFLKALPRVKP--FYAVKCNSSRGVVKILAELGAGFDCASKTEIEL 96 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V ERI+++ K I +I A ++G+ ++E EL +++ + IA Sbjct: 97 VQDIGVTPERIIYANPCKQISQIKFAAKTGVQMMTFDNEVELSKVSRNHPNARMVLRIA- 155 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S+ + KFG P+ L A L + GV H+GS + Sbjct: 156 ---------TDDSKSSARLSVKFGAPLKSCRRLLEMAKNLSV-DVIGVSFHVGSGCTDSK 205 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ +A R + + G+N+ +D+GGG S R + + + Sbjct: 206 AYTQAIADARLVFEMASEFGYNMWLLDIGGGFPGTEDSKIRFEEMAGVINPALDLYFPEG 265 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 +II EPGR+ VA L +I+ K + + + + D F Sbjct: 266 SDVQIIAEPGRYYVASAFSLAVNIIAKKEVLMEHSGSDDEENGPNKNIMYYVNDGVYGSF 325 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P+ D+ + + GP C+ D IA N + GD L E Sbjct: 326 NCLVFDHAHPKPILHKKPSPDQPLYTSSLWGPTCDGLDQIAENLLLPEHHVGDWLLFENM 385 Query: 372 GAYGAVQSGTYNSRLLIPE 390 GAY S +N P Sbjct: 386 GAYTIAASSNFNGFQQSPV 404 >gi|149640407|ref|XP_001508498.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 854 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 76/373 (20%), Positives = 138/373 (36%), Gaps = 24/373 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F + + + F A YA+K N++ ++TL +LG+G D S+GEL + Sbjct: 441 FLVADLGELVRRHRGFLRALPR--VTPFYAVKCNNSPWALQTLKNLGTGFDCASQGELEQ 498 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L VPA RI+++ K I A G+ ++E EL + + + I Sbjct: 499 VLELGVPAARIIYANPCKQTSHIQFAASHGVRLMTFDNEGELTKVAKFHPTASMVLRI-- 556 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + +KFG P+ L A L + GV H+GS + Sbjct: 557 --------KTEDSESLAQLSEKFGAPLESCPCLLEAARALGVA-VVGVSFHVGSGCQNSQ 607 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A + + + R GH ++ +D+GGG ++ + + Sbjct: 608 TFRRAIEDAHRVFEMGRQEGHEMRLLDIGGGFPGNESFVPTFEEMAEVINSSLDRHFPEG 667 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSAD--------KTFVILDVAMNDFMRPTLYD 318 ++I EPG++ V +I+ ++ + + + + F L Sbjct: 668 SGVELIAEPGKYYAMSVCRAAVNIIAKREVVEEGGSGSKRFMYYMNNGVYGSFQSFALEK 727 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIA-LNRKIALPRPGDLLYIEKTGAYGAV 377 + + + + + GP C+ D I + + GD L E GAY Sbjct: 728 IEPKPIVMKKISSELPVYPCSLWGPTCDNLDKITQDDIPLPELDVGDWLMFENMGAYTVT 787 Query: 378 QSGTYNSRLLIPE 390 + +N P Sbjct: 788 LTSAFNGFPAPPV 800 >gi|291533520|emb|CBL06633.1| Diaminopimelate decarboxylase [Megamonas hypermegale ART12/1] Length = 372 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 100/394 (25%), Positives = 170/394 (43%), Gaps = 22/394 (5%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M +FK + LA TP S IE+NY + V YA+K Sbjct: 1 MKSFKLTKEEATM-------LAQKYATPLEVISLEHIEENYNLLCKHIPRL--KVFYAIK 51 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANS + +++ L LGS D+ S GE+R V E+++++ KTI+ + A + GI Sbjct: 52 ANSAKCILEKLIKLGSNFDVASAGEIRLLSKMGVSGEKMIYANPVKTIEGLIEASKVGIK 111 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F +SE+E+ + + A + + + I KFG +I Sbjct: 112 RFTFDSENEIDKIKKYVPDAEVLARVKIKQSDAI----------VNLNIKFGADETKILD 161 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L YA G+K +G+ H+GSQ+ +S+ +AF L R L +L+++G +I+++D+GGGL Sbjct: 162 LLNYAK-ANGLKANGICFHVGSQVLSTKSYERAFSLARGLIDRLKASGLDIKYMDIGGGL 220 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 +A S+ ++ EPGR++ ++T +I + +K Sbjct: 221 PVACLDKDVDAEKIM-KSINDCLADFEDVEVWAEPGRYICGSAVNVITSIIGKQMRDEKQ 279 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 + +D + L+D + + D + A I GP C++ D + Sbjct: 280 WYYIDDGIYGSFSGILFDHWDYDIISLK-DEDNTYEKATIAGPSCDSLDIVKKEMYCPKL 338 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN 394 GDLL GAY V + T+N L + + Sbjct: 339 DEGDLLIALNAGAYSKVSATTFNGFSLPKTVALE 372 >gi|330803450|ref|XP_003289719.1| hypothetical protein DICPUDRAFT_98470 [Dictyostelium purpureum] gi|325080187|gb|EGC33753.1| hypothetical protein DICPUDRAFT_98470 [Dictyostelium purpureum] Length = 453 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 77/377 (20%), Positives = 136/377 (36%), Gaps = 29/377 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I + YL + + YA+K N ++K L LG+ D S E+ Sbjct: 79 FFVADIAVIIRQYLKWKKNLP--NVTPFYAVKCNPTIGILKVLDALGTSYDCASRTEIET 136 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ K I I A + ++ SEL+ + + IA Sbjct: 137 VLNLGVDPTRIIYANPCKQISAIKFARAHNVKLMTFDNVSELEKIEKFFPEAELVLRIAP 196 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S + KFG+ I + L A + +K+ GV H+GS Sbjct: 197 D----------DSKSLMRFGTKFGVHIDDCYDLLEMAKEM-NLKVVGVSFHVGSGCFDSI 245 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A K+++ + + + + +DVGGG + + + Sbjct: 246 AYDSALKMVKSVFEMAKKLDMTLTLVDVGGGFSGSNDEMFEKFT--TVIREKTAELFDSN 303 Query: 269 CKIILEPGRFLVADVGILVTKVISIKK-SADKTFVILDVAMNDFMRPTLY---------- 317 +II EPGR+ A L VIS + + N+ + Y Sbjct: 304 VRIIAEPGRYFAAQSHTLAVTVISKRIIKQEDNRQHPRRTSNNMRQYNYYLADGVYGSFN 363 Query: 318 ---DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + ++ ++ + GP C++ D IA + +I + GD LY GAY Sbjct: 364 NIQFDHAKPTPMLLKPSNKQPTPCTLFGPTCDSIDVIARDTQIPELKIGDWLYFPDMGAY 423 Query: 375 GAVQSGTYNSRLLIPEI 391 + ++N P Sbjct: 424 TTASASSFNGFCPPPVY 440 >gi|83859343|ref|ZP_00952864.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Oceanicaulis alexandrii HTCC2633] gi|83852790|gb|EAP90643.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Oceanicaulis alexandrii HTCC2633] Length = 864 Score = 170 bits (430), Expect = 5e-40, Method: Composition-based stats. Identities = 97/367 (26%), Positives = 159/367 (43%), Gaps = 16/367 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y I+ +N YA+KAN + V+KT+ G G + VS GEL R Sbjct: 511 YVYDLETIKARASAVANI--KSVNRAFYAMKANPHPDVLKTIFEAGLGFECVSPGELMRL 568 Query: 90 LAAPV--PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ++++F+ E A++ G L K + Sbjct: 569 KDTFPGLDPKKVLFTPNFAARHEYAAAIELGTNLTIDGLH-----PLTEWPELFKGVEVI 623 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NPD H+ + T + KFGIP+ Q+ + A+ I + + Sbjct: 624 LRINPDRPRGHHQHVQTAGPKAKFGIPLDQLDAARDAAAKAGATVI-----GLHAHAGSG 678 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQYFGN 266 ++ + + + +I+ ++VGGGLG+ ++ + A L Sbjct: 679 VIEAGHWREIGAILARAAEGFSDIRILNVGGGLGVPESAEAPALDLALVDAELAKLKQAL 738 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +I +EPGR+ VA+ G+L++ V IK + F+ L MN +RP LY A HEI + Sbjct: 739 PDYEIWMEPGRYPVAESGVLLSAVTQIKHAFGTRFIGLGTGMNSLIRPALYGARHEIVNL 798 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + + A IVGPICE+ D + +R + + GD++ I + GAYGAV S YN R Sbjct: 799 SRYDEEGTGM-ASIVGPICESADLLGADRLMPETKEGDVIAIAEAGAYGAVMSSRYNLRE 857 Query: 387 LIPEIMV 393 E+++ Sbjct: 858 PADEVVI 864 >gi|224372743|ref|YP_002607115.1| Orn/DAP/Arg decarboxylase, family 2 [Nautilia profundicola AmH] gi|223589196|gb|ACM92932.1| Orn/DAP/Arg decarboxylase, family 2 [Nautilia profundicola AmH] Length = 444 Score = 170 bits (430), Expect = 5e-40, Method: Composition-based stats. Identities = 105/428 (24%), Positives = 178/428 (41%), Gaps = 32/428 (7%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--ALKANSNQAVIK 69 + VS+ L + +P + +S IE+ Y F NAF V + + K N A+ K Sbjct: 30 EIDGVSVHDLVNKYGSPLFVFSERIIEEKYHEFKNAFTSRYPEVEFWWSYKTNYLDAICK 89 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 LGS ++VSE E +A + + I+F+G K D + A++ G ++ E Sbjct: 90 IYHKLGSKAEVVSEFEYEKARRLGIEGKNIIFNGPYKPKDALKKAVEEGAKIH-IDHWYE 148 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + L + A LG + P+A R N D + +FG I + A Sbjct: 149 INDLEEIAEELGIEIPVAIRCNMDTG--------VYPQWSRFGFNIDNGEAYDAVKRIYE 200 Query: 190 GVKISGVDMHIGSQIDQIESFHKAF---KLLRDLTQQLRSNGHNIQHIDVGGGLG----- 241 G K+ +H + + A KL+ + + G+ I++IDVGGG Sbjct: 201 GKKLYLTGLHSHIGTFMLSANAYANETKKLIELKNKIEKDFGYEIEYIDVGGGFASKNRL 260 Query: 242 --IAYHSDHRPPSSSDYASLIHQYFGNLQ----CKIILEPGRFLVADVGILVTKVIS-IK 294 + + PS+ +YA I K+ LE GR L+ + G L+T V + + Sbjct: 261 KGVYQAPEVIVPSADEYAEAITNAIFETNKGKLPKLYLETGRALIDEAGFLLTTVFAAKR 320 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 K I+D +N Y+ ++ + L+ + I GP+C D I+ N Sbjct: 321 MPDGKKSYIVDAGVNLLYTAFWYNF----EIALDKRYEGLNEPSQINGPLCMNIDVISEN 376 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIEL 413 + + G +L I GAY QS + R I+++ S H+I+ ++E Sbjct: 377 IMLPPLKRGSVLSIWPVGAYNVTQSMQFI-RYRPRIILIDKNSNTHLIKEADDLNYIVEK 435 Query: 414 DSIPAWLQ 421 + IP +L+ Sbjct: 436 EIIPDYLK 443 >gi|294506193|ref|YP_003570251.1| Aspartate kinase [Salinibacter ruber M8] gi|294342521|emb|CBH23299.1| Aspartate kinase [Salinibacter ruber M8] Length = 870 Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 107/380 (28%), Positives = 165/380 (43%), Gaps = 17/380 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L +LA ++P Y Y + G YA+KAN + V++ L G Sbjct: 500 ALLRLADD-ESPRYVYDPEVVTARSDEVQGL--GPIDQSFYAVKANPHPEVLRLLERRGL 556 Query: 77 GLDIVSEGELRRALAAPV--PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G + VS GEL R A R++F E A + G++ Sbjct: 557 GFECVSPGELDRVFEACPGLDPARVLFQPNFAAPAEYADAFERGVHVTVDNV-----QPL 611 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + RV+P H+K+ T + KFG+ A G + Sbjct: 612 AEHPDVFAGEELFVRVDPGQGEGHHRKVRTAGAQSKFGVVPD-DLGRLRAAVDQAGATVV 670 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY-HSDHRPPSS 253 G+ H+GS I ++ LL L + ++ ++VGGGLG+ Sbjct: 671 GLHAHVGSGITDESTWAGLVDLLASLAAEF----PAVRALNVGGGLGVPNASGGRPLDLD 726 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + A+L + Q + +EPGR+LVA+ G+L+ +V K +V LD MN +R Sbjct: 727 ALDAALGEAAARHPQYDLWMEPGRYLVAEAGVLLARVTQTKTKDAAAYVGLDTGMNSLLR 786 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P LY A+HEI + + + AD+VGP+CETGD + +R++ PGD L + TGA Sbjct: 787 PALYGAHHEIVNLSR-LDEPPAMTADVVGPVCETGDVLGHDRRLPPTEPGDTLLVATTGA 845 Query: 374 YGAVQSGTYNSRLLIPEIMV 393 YGA S YN R E+M+ Sbjct: 846 YGASMSNRYNLREPASEVML 865 >gi|294626294|ref|ZP_06704897.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599440|gb|EFF43574.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 869 Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 108/387 (27%), Positives = 178/387 (45%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + + +D YA+KAN++ A++ L Sbjct: 493 HAERAHLLSLSKA-GTPRYAYHLPTVRERAHALAQ-IAAVDQR-YYAIKANAHPAILMAL 549 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GELRR A R++F+ E + A G+ E Sbjct: 550 EQAGFGLECVSHGELRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVE-- 607 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + + R++ H+K++TG K KFG+ ++ A TL Sbjct: 608 ---ALRNWPEVFRGRNVWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLD 664 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 665 LT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 719 Query: 250 PPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + ++ +EPGR+LVA+ G+L+ V + + V LD M Sbjct: 720 PFDLEVWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGM 779 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR-PGDLLY 367 N +RP LYDA+ ++ DIVGPICE+ D R++ PGD++ Sbjct: 780 NTLIRPALYDAW-HDIENLSQLDAPADGTFDIVGPICESSDVFGKRRRLPAATVPGDVVL 838 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + GAYG + TYN R L E +++ Sbjct: 839 VADAGAYGYTMASTYNQRELPREEVID 865 >gi|26541511|gb|AAN85498.1|AF484556_20 diaminopimelase decarboxylase [Streptomyces atroolivaceus] Length = 433 Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 88/418 (21%), Positives = 144/418 (34%), Gaps = 18/418 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 + +A TP + Y + + T S + V Y+LKA QA+I+ G Sbjct: 20 DVRTVAEEFGTPVFVYDEATVRASSKTMSTLPNAFGLTVRYSLKACPGQAIIRLFDREGF 79 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D S E RRA+ A V RI + DE L F+ S +L + Sbjct: 80 SFDASSVWEARRAVLAGVEPGRISMTAQEAVFDENLRDLIDQGLQFDAGSLHQL----EE 135 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 +A R+NP + ++++G + FGI Q+ + + Sbjct: 136 YGRAYPGGAVAIRINPGFGSGLVGRLNSGGPQSSFGIWHEQLPEVKQIVEQYGLRLVRLQ 195 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 I L Q V + Sbjct: 196 SHIGSGHHWDILVDAVRTMLSFARDFQDVHTLDLGGGYRVSALQSDPVYDHTEWARVVAD 255 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA--DKTFVILDVAMNDFMRP 314 + +EPG +L A G LVTKVI + +F+ ++ + + RP Sbjct: 256 ELKQFAEETGRRLHTEVEPGTYLTALAGSLVTKVIDKADTGAEGNSFLKINSGLTEIARP 315 Query: 315 TLYDAYHEINYIVNPAGDR----LHIHADIVGPICETGDFI-ALNRKIALP-----RPGD 364 + Y H I + G ++VG C GD + A ++A GD Sbjct: 316 SYYGVQHPIVSVPATGGAERAADDREEFNVVGHCCIAGDVLTAKQEELAPVPLGRTEIGD 375 Query: 365 LLYIEKTGAYGAVQSG-TYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDSIPAWL 420 + IE+ G+Y + S +NS E++ F +IR R + +++I + IP L Sbjct: 376 YVVIERAGSYCSSMSMKNFNSYPEAAEVLRRTDGSFDLIRSRQSIEQVIVNERIPEGL 433 >gi|187922157|ref|YP_001893799.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia phytofirmans PsJN] gi|187713351|gb|ACD14575.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia phytofirmans PsJN] Length = 402 Score = 170 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 97/395 (24%), Positives = 160/395 (40%), Gaps = 16/395 (4%) Query: 11 LHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 L + + +LA TPF+ Y +AI+ + + Y++KAN AVI Sbjct: 12 LQFNGIDVRQLADRAGQTPFFAYDRSAIDTRVRELRSLLPSA-MQLHYSIKANPMPAVIH 70 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 LA G D+ S E+ AL A + I F+G GK+ D++ A+ SG+ + Sbjct: 71 YLAQRVDGFDVASAQEMALALDAGATPDSIGFAGPGKSHDDLRRAVASGVNVHVESDT-Q 129 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L+ + LG + + R+NPD G FG+ + QI +L T Sbjct: 130 LRLVTALGWELGVQPNVVIRINPDFQVGHSGMRMGGSAA-PFGVDVDQIPALLHELETRE 188 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 ++G + GSQ + +A + DL +L S+ GG + Sbjct: 189 VA-LAGFHVFWGSQCLHASTIIEAQRQSVDLILRLASDLPRPLRFVNLGGGFGIPYFPGE 247 Query: 250 PPSSSDYASLIHQYFGNLQCK------IILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 P + + C+ ILE GR+LV + GI V +VI K S +TFVI Sbjct: 248 TPLDTKVVCEAMHDWLPRLCERLPGTTPILELGRYLVGEAGIYVCRVIDRKVSRGRTFVI 307 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRL----HIHADIVGPICETGDFIALNRKIAL 359 D ++ + + G+R +VG +C D +A + ++ Sbjct: 308 TDGGLHHHLAASGNFGQVLRRNFPVVIGNRPDGISRERCYVVGCLCTPLDRLADDVELPE 367 Query: 360 PRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 GD + ++++GAYG S + S E++V Sbjct: 368 AHIGDFVVVKQSGAYGHSASPVHFLSHPEPVEMLV 402 >gi|73979739|ref|XP_856678.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 8 [Canis familiaris] Length = 448 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 89/369 (24%), Positives = 147/369 (39%), Gaps = 17/369 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++ ++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAREL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPAD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL--DVAMNDFMRPTLYDAYHEIN 324 ++I EPGR+ VA L +I+ K S+++TF+ D F A+ + Sbjct: 267 SGVRVIAEPGRYYVASAFTLAVNIIAKKLSSEQTFMYYVNDGVYGSFNCILYDHAHVKPL 326 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 P D + I GP C+ D I + GD + E GAY + T+N Sbjct: 327 LQKRPKPDEKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAAASTFNG 386 Query: 385 RLLIPEIMV 393 V Sbjct: 387 FQRPTIYYV 395 >gi|330830642|ref|YP_004393594.1| Ornithine decarboxylase [Aeromonas veronii B565] gi|328805778|gb|AEB50977.1| Ornithine decarboxylase [Aeromonas veronii B565] Length = 388 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 85/393 (21%), Positives = 147/393 (37%), Gaps = 18/393 (4%) Query: 8 EGSLHAENV---SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 +L A++V +L +P A+ K Y ++A D + YALK + Sbjct: 2 NETLVAKDVVAQDYRQLVEQFGSPLLLLDKAAVRKQYRALTSALP--DVRLHYALKPLPH 59 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +AV+ L G+ D+ + GE+ + V R + + K +I AL+ G F Sbjct: 60 EAVVSVLKEEGACFDLATNGEVDLVRSQGVRPGRCIHTHPIKRDSDIRYALEFGCTVFVY 119 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ EL+ + ++F + KFG Q L Sbjct: 120 DNPLELEKFIPYKDEVKLLLRVSF----------PNPETKVDLSKKFGCTPEQALPLLQL 169 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 A G+K+ G+ H+GSQ+ +A R++ +Q + G +D+GGG + Y Sbjct: 170 AH-AKGIKVMGLSFHVGSQVPHARRHVQAIDACREIMEQAWALGLKPWVLDIGGGFPVDY 228 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + I EPGRF+ A V+ V+ DK + L Sbjct: 229 EGGEFDIDGFCAPIREALAKLPATVQKIAEPGRFISAPAMTSVSSVMGKAHRGDKIWYYL 288 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D + LYD P ++ + GP C++ D I + G+ Sbjct: 289 DDGLYGSYNGQLYDHVTYPV--STPYASGEQHNSVLSGPTCDSVDVIRDGIMLPDLAIGE 346 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ 397 L+ + GAY + T+N ++++ SQ Sbjct: 347 LVVGKVMGAYTWASASTFNFFPKASILILDSSQ 379 >gi|294666660|ref|ZP_06731897.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603566|gb|EFF46980.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 869 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 108/387 (27%), Positives = 178/387 (45%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + + +D YA+KAN++ A++ L Sbjct: 493 HAERAHLLSLSKA-GTPRYTYHLPTVRERAHALAQ-IAAVDQR-YYAIKANAHPAILMAL 549 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GELRR A R++F+ E + A G+ E Sbjct: 550 EQAGFGLECVSHGELRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVE-- 607 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + + R++ H+K++TG K KFG+ ++ A TL Sbjct: 608 ---ALRNWPEVFRGRNVWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLD 664 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 665 LT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 719 Query: 250 PPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + ++ +EPGR+LVA+ G+L+ V + + V LD M Sbjct: 720 PFDLEVWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGM 779 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR-PGDLLY 367 N +RP LYDA+ ++ DIVGPICE+ D R++ PGD++ Sbjct: 780 NTLIRPALYDAW-HDIENLSQLDAPADGTFDIVGPICESSDVFGKRRRLPAATVPGDVVL 838 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + GAYG + TYN R L E +++ Sbjct: 839 VADAGAYGYTMASTYNQRELPREEVID 865 >gi|120612446|ref|YP_972124.1| Orn/DAP/Arg decarboxylase 2 [Acidovorax citrulli AAC00-1] gi|120590910|gb|ABM34350.1| Orn/DAP/Arg decarboxylase 2 [Acidovorax citrulli AAC00-1] Length = 404 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 102/404 (25%), Positives = 173/404 (42%), Gaps = 16/404 (3%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 F +G++ + L +LA TPF+ Y + + + D + Y++K Sbjct: 5 DTFTTRDGAIEIGGLPLSRLAERAGRTPFFAYDRSKLAERVALLRRWLA-PDIRIHYSIK 63 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN A++ +A L G D+ S GELR AL + AE I +G GKT ++ + +G Sbjct: 64 ANPMPALVHCMAGLVDGFDVASAGELRVALDTGMAAEHIALAGPGKTELDVRSTVGAGAT 123 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 +ES +L + +LG + +A R+NPD T G +FGI Q Sbjct: 124 -LTLESVHQLDAAARAGQALGVRPRVALRINPDFQPKTSGMRMGGGP-RQFGIDAEQAPG 181 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGG 239 + A + G + GSQ ++ A + + +L +L + +++GGG Sbjct: 182 VLAAIAQRDL-DFRGFHVFWGSQCLDADTVISAQRHVAELVVRLADQANAPVAFVNMGGG 240 Query: 240 LGIAYHSDHRPPSSSDYASLIHQY-----FGNLQCKIILEPGRFLVADVGILVTKVISIK 294 GI Y + R + + Q+ + ++ +E GR+LV + GI V +++ K Sbjct: 241 FGIPYFENERALDLEPIGAAMRQWLVPLRQRLPEARLAMEFGRYLVGEAGIYVCRILDKK 300 Query: 295 KSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 S +TF++ D ++ + I N +G IVG +C D Sbjct: 301 VSRGETFLVTDGGLHHQLAASGNFGQVLRRNYPVAIGNKSGLPATETCHIVGCLCTPLDR 360 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 IA +A P GD + + ++GAYG S + S EI+V Sbjct: 361 IADRVALASPDIGDFVVVAQSGAYGRSASPAAFLSHPEPAEILV 404 >gi|170694158|ref|ZP_02885313.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia graminis C4D1M] gi|170140898|gb|EDT09071.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia graminis C4D1M] Length = 402 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 100/395 (25%), Positives = 162/395 (41%), Gaps = 16/395 (4%) Query: 11 LHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 L V + +LA TPF+ Y AI+ + + Y++KAN AV+ Sbjct: 12 LQFGGVDVRQLADRAGRTPFFAYERAAIDTRIRELRSLLP-PGVHLHYSIKANPMPAVVH 70 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 LA G D+ S E+ AL A I F+G GK+ D++ A+ SG+ + Sbjct: 71 YLAARVDGFDVASAQEMAVALNAGAAPADIGFAGPGKSYDDLRRAISSGVNVHVESET-Q 129 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L+ + LG + +A R+NPD + G FG+ + Q+ +L Sbjct: 130 LRLVTALGWELGVQPGVAIRINPDFEVG-RSGMRMGGGAAPFGVDVDQVPALLRELQARQ 188 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDH 248 ++G + GSQ + +A + DL + R + +++GGG GI Y Sbjct: 189 VA-LAGFHIFWGSQCLDAATVIQAQRQSADLVARLARGLSEPPRFVNLGGGFGIPYFPGE 247 Query: 249 RPPSSSDYASLIHQYFGNLQ-----CKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 P + +H + L ILE GR+LV + GI V +VI K S +TFVI Sbjct: 248 TPLNVQAVCEAMHDWLPRLCERVSGMTPILELGRYLVGEAGIYVCRVIDRKVSRGRTFVI 307 Query: 304 LDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 D ++ + I N +VG +C D +A + ++ Sbjct: 308 TDGGLHHHLAASGNFGQVLRRNFPVVIGNRPDGVPQQRCHVVGCLCTPLDRLADDIELPE 367 Query: 360 PRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 GDL+ + ++GAY S + S E++V Sbjct: 368 AHIGDLVVVRQSGAYARSASPLHFLSHPEPVEMLV 402 >gi|78223226|ref|YP_384973.1| Orn/DAP/Arg decarboxylase 2 [Geobacter metallireducens GS-15] gi|78194481|gb|ABB32248.1| Orn/DAP/Arg decarboxylase 2 [Geobacter metallireducens GS-15] Length = 419 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 113/404 (27%), Positives = 170/404 (42%), Gaps = 12/404 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 G N+ E+LA TPFY Y +++ AF G + YA+KAN N+ Sbjct: 6 QNGKTCLRNICFEELAARYGTPFYLYDLDKVKEKCAAVRKAF-GDSLELLYAVKANPNRE 64 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 ++ + GLDI S GEL RAL A I F+G GKT DE+ +L++G+ C +VES Sbjct: 65 LLAAMRGEVDGLDIASAGELERALETGYDAGCISFAGPGKTRDELRRSLEAGVGCISVES 124 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 EL L + +A I RVNP + GK +L + Sbjct: 125 LRELNDLRDLVRAGSHRAYILVRVNPQLLIRDFAVKMGGKASQFGIDEEELPSALDFIKA 184 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHK-AFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 G+ ++ G+Q E+ + L + G + I++GGGLG++Y+ Sbjct: 185 NADAFDFKGIHIYAGTQCLNEEALAQNLANTLAIAARITTDYGMECRVINIGGGLGVSYY 244 Query: 246 SDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGILVTKVISIKKSADK 299 +H A L F + +I+LE GRFLVA+ GI VT+V+S K S + Sbjct: 245 EEHPGLDLDKLALLFRAEFDRYREATGTKPRILLELGRFLVAEAGIYVTRVVSEKLSRGE 304 Query: 300 TFVILDVAMNDFMR---PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 F +LD MN + I +VGP+C D + Sbjct: 305 QFYVLDGGMNHHLSASGNLGMTIRKNYLVRNLSRPGAERIICTLVGPLCTPLDLMGKGVT 364 Query: 357 IALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFH 399 + +P GDL+ +G+YG S + E++V G Sbjct: 365 VEVPEVGDLVGFLNSGSYGYSASPLLFLGHGEPCELLVEGKDVR 408 >gi|91780468|ref|YP_555675.1| putative Orn/DAP/Arg decarboxylase [Burkholderia xenovorans LB400] gi|91693128|gb|ABE36325.1| Putative Orn/DAP/Arg decarboxylase [Burkholderia xenovorans LB400] Length = 402 Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 101/395 (25%), Positives = 155/395 (39%), Gaps = 16/395 (4%) Query: 11 LHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 L + + +LA TPF+ Y +AI+ N + Y++KAN AVI Sbjct: 12 LQFGGLDVRQLADRAGRTPFFAYDRSAIDIRVRELRNLLP-AGMHLHYSIKANPMPAVIH 70 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 LA G D+ S E+ AL A + I F+G GK+ D++ A+ SGI + Sbjct: 71 HLAQRVDGFDVASAQEMALALDAGTAPDAIGFAGPGKSHDDLRRAVASGINVHVESET-Q 129 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L+ + LG + +A RVNPD G FG+ + Q+ +L Sbjct: 130 LRLVTALGWELGVQPSVAIRVNPDFQVGHSGMRMGGGAA-PFGVDVDQVPALLRELEARE 188 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 ++G + GSQ + KA + DL +L S GG + Sbjct: 189 VA-LAGFHVFWGSQCLHAATIIKAQRQSADLILRLASGVPRPLRFVNLGGGFGIPYFPGE 247 Query: 250 PPSSSDYASLIHQYFGNLQCK------IILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 P Q + C+ ILE GR+LV + GI V +VI K S +TFV+ Sbjct: 248 TPLDVKAVCEAMQDWLPPLCERLPGTTPILELGRYLVGEAGIYVCRVIDRKVSRGRTFVV 307 Query: 304 LDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 D ++ + I N +VG +C D +A ++ Sbjct: 308 TDGGLHHHLAASGNFGQVLRRNFPVVIGNRPDGVPRERCHVVGCLCTPLDRLADEVELPE 367 Query: 360 PRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 GD + I ++GAYG S + S E++V Sbjct: 368 AHIGDFVVIMQSGAYGRSASPVRFLSHPEPVEMLV 402 >gi|21243638|ref|NP_643220.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas axonopodis pv. citri str. 306] gi|21109214|gb|AAM37756.1| bifunctional diaminopimelate decarboxylase/asparta [Xanthomonas axonopodis pv. citri str. 306] Length = 869 Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 108/387 (27%), Positives = 177/387 (45%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + + +D YA+KAN++ A++ L Sbjct: 493 HAERAHLLSLSRA-GTPRYAYHLPTVRERAHALAQ-IAAVDQR-YYAIKANAHPAILMAL 549 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GELRR A R++F+ E + A G+ E Sbjct: 550 EQAGFGLECVSHGELRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVE-- 607 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + + R++ H+K++TG K KFG+ ++ A TL Sbjct: 608 ---ALRNWPEVFRGRNVWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVEVARTLE 664 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 665 VT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 719 Query: 250 PPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + ++ +EPGR+LVA+ G+L+ V + + V LD M Sbjct: 720 PFDLEVWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGM 779 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP-RPGDLLY 367 N +RP LYDA ++ DIVGPICE+ D R++ PGD++ Sbjct: 780 NTLIRPALYDAG-HDIENLSQLDAPADGTFDIVGPICESSDVFGKRRRLPAATAPGDVVL 838 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + GAYG + TYN R L E +++ Sbjct: 839 VADAGAYGYSMASTYNQRELPREEVID 865 >gi|117621391|ref|YP_855811.1| ornithine decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562798|gb|ABK39746.1| ornithine decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 383 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 82/381 (21%), Positives = 138/381 (36%), Gaps = 15/381 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L +P A+ K Y + A D + YALK ++AV+ L G+ Sbjct: 9 DYRQLVEQFGSPLLLLDKAAVRKQYRALAAALP--DVRLHYALKPLPHEAVVSVLKEEGA 66 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ + GE+ + V R + + K +I AL+ G F ++ EL+ Sbjct: 67 CFDLATNGEVDLVRSQGVRPGRCIHTHPIKRDSDIRYALEYGCTVFVYDNPLELEKFIPY 126 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + ++F + KFG Q L A G+K+ G+ Sbjct: 127 KDEVKLLLRVSF----------PNPETKVDLSKKFGCTPEQALPLLQLAH-AKGIKVMGL 175 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GSQ+ +A R++ +Q G +D+GGG + Y Sbjct: 176 SFHVGSQVPHARRHVQAIDACREIMEQAWELGLKPWVLDIGGGFPVDYEGGEFDIDGFCA 235 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + I EPGRF+ A V+ V+ DK + LD + L Sbjct: 236 PIREALAKLPATVQKIAEPGRFISAPAMTSVSSVMGKAHRGDKIWYYLDDGLYGSYNGQL 295 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 YD P ++ + GP C++ D I + G+L+ GAY Sbjct: 296 YDHVTYPV--STPLARGELHNSVLSGPTCDSVDVIRDGIMLPDLAIGELVVGRVMGAYTW 353 Query: 377 VQSGTYNSRLLIPEIMVNGSQ 397 + T+N ++++ SQ Sbjct: 354 ASASTFNFFPKASILILDSSQ 374 >gi|325925946|ref|ZP_08187313.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas perforans 91-118] gi|325543611|gb|EGD15027.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas perforans 91-118] Length = 827 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 111/387 (28%), Positives = 181/387 (46%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + +D YA+KAN++ A++ L Sbjct: 451 HAERAHLLSLSKA-GTPRYAYHLPTVRARAHALAQ-IAAVDQR-YYAIKANAHPAILMAL 507 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS+GELRR A R++F+ E + A G+ E Sbjct: 508 EQAGFGLECVSQGELRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVE-- 565 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + I R++ H+K++TG K KFG+ ++ A TL Sbjct: 566 ---ALRNWPEVFRGRTIWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLE 622 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 623 VT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 677 Query: 250 PPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + ++ +EPGR+LVA+ G+L+ V + + V LD M Sbjct: 678 PFDLEVWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGM 737 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP-RPGDLLY 367 N +RP LYDA+H+I + + DIVGPICE+ D R++ PGD++ Sbjct: 738 NTLIRPALYDAWHDIENLSQLDAPADGM-FDIVGPICESSDVFGKRRRLPAATAPGDVVL 796 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + GAYG + TYN R L E +++ Sbjct: 797 VADAGAYGYTMASTYNQRELPREEVID 823 >gi|290986807|ref|XP_002676115.1| predicted protein [Naegleria gruberi] gi|284089715|gb|EFC43371.1| predicted protein [Naegleria gruberi] Length = 1020 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 101/392 (25%), Positives = 158/392 (40%), Gaps = 21/392 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT---MVCYALKANSNQAVIKTLAHL 74 L +L P Y Y N N + +A+K+N N ++K + Sbjct: 628 LLELMQAEDQPLYVYDVDQFYANAQKLINISTKCGGPVDTIFFAIKSNPNVEILKIFEGI 687 Query: 75 GSGLDIVSEGELRRALAAPV--PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G GL+ VS E+R RI+F+ E A+ G+ Sbjct: 688 GFGLECVSIDEVRMVCNLFPNIDKSRILFTPNFAPKKEYREAISLGVMLTIDSL-----Y 742 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L + + R++P H K+ T + KFGI I I Sbjct: 743 PLMNWSELLRGKSVLLRIDPGAGKGHHAKVKTSGVQSKFGIHISDIPQAIELCEQFSITV 802 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP- 251 + +D+ E++ K L L + +++ ID GGGLG+ Y + Sbjct: 803 MGLHAHVGSGILDEAEAWKKTATTLTQLISEYPKLAKDVKLIDCGGGLGVPYVPYKQTEL 862 Query: 252 ---SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + + K+ +EPGRFL A+ G+L+ +V IK K F+ ++ M Sbjct: 863 DLGEVAKAMTEFKLNNNPTNVKLCMEPGRFLTANAGVLLARVTQIKNKNFKLFIGIETGM 922 Query: 309 NDFMRPTLYDAYHEINYIVNPAGD------RLHIHADIVGPICETGDFIALNRKIA-LPR 361 N +RPTLY+++HEI + + + ADIVGPICE+GD +R I+ R Sbjct: 923 NSLIRPTLYNSHHEIVNLSKISNPDSDDPAESTMVADIVGPICESGDVFGNDRPISSETR 982 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 GD+L I G+YG S YN+R E+ + Sbjct: 983 EGDVLCICTAGSYGFSMSSNYNNRAPAKEVFI 1014 >gi|325916086|ref|ZP_08178375.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas vesicatoria ATCC 35937] gi|325537695|gb|EGD09402.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas vesicatoria ATCC 35937] Length = 869 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 108/387 (27%), Positives = 176/387 (45%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L LA TP Y Y + + +D YA+KAN++ A++ L Sbjct: 493 HAERAHLLSLAKA-GTPRYAYHLPTVRARAHALAQ-IAAVDQR-YYAIKANAHPAILMAL 549 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GELRR R++F+ E + A G+ E Sbjct: 550 EQAGFGLECVSHGELRRVFQTLPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVE-- 607 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + + R++ H+K++TG K KFG+ ++ A TL Sbjct: 608 ---ALRNWPEVFRGRNVWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVEAARTLE 664 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 665 VT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 719 Query: 250 PPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + ++ +EPGR+LVA+ G+L+ V + + V LD M Sbjct: 720 PFDLEVWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLLAGVTQVIEKDGVQRVGLDAGM 779 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLY 367 N +RP LYDA+ ++ DIVGPICE+ D R++ PGD++ Sbjct: 780 NTLIRPALYDAW-HDIENLSRLDTAADGAFDIVGPICESSDVFGKRRRLPSSTAPGDVVL 838 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + GAYG + TYN R L E +++ Sbjct: 839 VADAGAYGYSMASTYNQRELPREEVID 865 >gi|326916504|ref|XP_003204547.1| PREDICTED: ornithine decarboxylase-like [Meleagris gallopavo] Length = 464 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 86/377 (22%), Positives = 138/377 (36%), Gaps = 30/377 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K ++ + A YA+K N ++AV+KTLA +G+G D S+ E++ Sbjct: 44 FYVADLGDIVKKHMRWHKALPR--VTPFYAVKCNDSEAVVKTLAAVGAGFDCASKTEIQL 101 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A SG+ +SE EL + + I Sbjct: 102 VQSVGVPPERIIYANPCKQLSQIKHAASSGVQMMTFDSEVELMKIARAHPKAKLVLRIT- 160 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L V I GV H+GS E Sbjct: 161 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKELDLV-IVGVSFHVGSGCTDPE 210 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 211 TFVQAISDARCVFDMGAELGFSMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPLD 270 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 + II EPGR+ VA L + + + D F Sbjct: 271 SEVTIIAEPGRYYVASAFTLAVNIIAKKIVIKEQTGSDDEDDVNDKTLMYYVNDGVYGSF 330 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D I GP C+ D I + + GD + E Sbjct: 331 NCILYDHAHVKPVLQKRPKPDDSCYSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENM 390 Query: 372 GAYGAVQSGTYNSRLLI 388 GAY + T+N Sbjct: 391 GAYTVAAASTFNGFQRP 407 >gi|119468765|ref|ZP_01611817.1| diaminopimelate decarboxylase [Alteromonadales bacterium TW-7] gi|119447821|gb|EAW29087.1| diaminopimelate decarboxylase [Alteromonadales bacterium TW-7] Length = 407 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 87/383 (22%), Positives = 146/383 (38%), Gaps = 17/383 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 +E+LA P AI + Y NA G ++ +ALK AV++TL G+ Sbjct: 35 IEQLAAQFGAPLMVLDCEAIRRQYHALKNALPG--VVLHFALKPLPLAAVVRTLLEEGAS 92 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+ + GE+ + VP+ER + + K +I AL G F V++ +EL+ Sbjct: 93 FDLATSGEVDLVASQGVPSERTIHTHPIKRDSDIRDALAYGCTVFVVDNINELEKFIAYK 152 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 ++FR KFG + +YA L +I G+ Sbjct: 153 GQAEILVRLSFRNKDAF----------ADLSKKFGCSPDAAIDIISYAQQLGI-RIKGLS 201 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 H+GSQ + +A + ++ G GG +S P + A Sbjct: 202 FHVGSQSPNPTKYVEAINACAKVINKVSELGLPALSTLDIGGGFPVPYSADVLPINVFCA 261 Query: 258 SLI-HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + +II EPGRF+VA V V+ + +T+ LD + + Sbjct: 262 PINVALAQLPETMQIIAEPGRFIVASSVTSVASVMGQAQREGRTWYYLDDGIYGSFSGLM 321 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 +D G+R + + GP C++ D ++ + + GDL+ GAY Sbjct: 322 FDEAAYPIDSAKQDGERFE--SVLAGPTCDSIDVVSDSIMLPKLNNGDLIISRMMGAYTL 379 Query: 377 VQSGTYNSRLLIPEIMVNGSQFH 399 + +N E++V Q H Sbjct: 380 ATATDFNFFKR-AEVIVLNEQVH 401 >gi|260768554|ref|ZP_05877488.1| ornithine decarboxylase/arginine decarboxylase [Vibrio furnissii CIP 102972] gi|260616584|gb|EEX41769.1| ornithine decarboxylase/arginine decarboxylase [Vibrio furnissii CIP 102972] gi|315180265|gb|ADT87179.1| Diaminopimelate decarboxylase [Vibrio furnissii NCTC 11218] Length = 399 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 81/387 (20%), Positives = 151/387 (39%), Gaps = 17/387 (4%) Query: 11 LHAENVSLEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 L A++V L + P + + Y S A + + +ALK + V++ Sbjct: 18 LSADDVHLIESSVEQFGAPLLLLDCDIVRQQYRALSAALP--NVTLHFALKPLPHPVVVR 75 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 TL G+ D+ + GE+ VPAER + + K +I AL G F V++ +E Sbjct: 76 TLLQEGASFDLATTGEVELVAQEGVPAERTIHTHPIKRDADIRDALAYGCNVFVVDNLNE 135 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + ++FR + KFG Q ++ A Sbjct: 136 LAKFKAYRDEVELLVRLSFRNSEAF----------ADLSKKFGCSPEQAVNIIEMAKEW- 184 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDH 248 ++I G+ H+GSQ + + +A + + + +++ + +D+GGG + Y Sbjct: 185 NIRIKGLSFHVGSQTTNPQKYVEAIRTCKGVMEEVVARGLPALSTLDIGGGFPVNYTKQV 244 Query: 249 RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P ++I EPGRF+VA + V V+ + + + LD + Sbjct: 245 MPIDQFCLPINEALAELPETVQVIAEPGRFIVAQCMMSVASVMGQAERDGQMWYYLDDGV 304 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 ++D + G+R + + + GP C++ D IA + + GDL+ Sbjct: 305 YGSFSGLIFDDAQYPLVTLKQEGER--VPSVLAGPTCDSIDVIAEDILLPKLDNGDLIVG 362 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMVNG 395 GAY + + +N ++ N Sbjct: 363 RMMGAYTSATATDFNFFKRAQTVVFNE 389 >gi|84622974|ref|YP_450346.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366914|dbj|BAE68072.1| bifunctional diaminopimelate decarboxylase/aspartase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 869 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 110/387 (28%), Positives = 179/387 (46%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + +D YA+KAN++ A++ L Sbjct: 493 HAERAHLLSLSKA-GTPRYAYHLPTVRARAHALAQV-AAVDQR-YYAIKANAHPAILMAL 549 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GE+RR A R++F+ E A G+ E Sbjct: 550 EQAGFGLECVSHGEVRRVFQALPELSPRRVLFTPSFAPKAEYAAAFALGVTVTVDNVE-- 607 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + I R++ H+K++TG K KFG+ ++ A TL Sbjct: 608 ---ALRNWPEVFRGRNIWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLE 664 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 665 VT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 719 Query: 250 PPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + ++ +EPGR+LVA+ G+L+ V + + V LD M Sbjct: 720 PFDLDVWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLLASVTQVIEKDGVQRVGLDAGM 779 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR-PGDLLY 367 N +RP LYDA+H+I + D+VGPICE+ D R++ PGD++ Sbjct: 780 NTLIRPALYDAWHDIENLSQLDAPADS-TFDVVGPICESSDVFGKRRRLPAATMPGDVVL 838 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + TGAYG + TYN R L E +++ Sbjct: 839 VADTGAYGYSMASTYNQRELPREEVID 865 >gi|157117130|ref|XP_001652949.1| ornithine decarboxylase [Aedes aegypti] gi|108876150|gb|EAT40375.1| ornithine decarboxylase [Aedes aegypti] Length = 433 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 79/382 (20%), Positives = 142/382 (37%), Gaps = 23/382 (6%) Query: 18 LEKLAHVVQT--PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 +++L + + T PFY I + + + + YA+K N + V TLA LG Sbjct: 25 IDQLTNELSTEEPFYVMDIDDIVRKHQAWIEKMPR--VVPHYAVKCNDTEVVCATLATLG 82 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 + D S+GE+ + LA V +RI+F+ K + A + + +SE EL + + Sbjct: 83 ASFDCASKGEIAKILALGVSPDRIIFANPMKPSSHLRYASANNVKTMTFDSEIELHKIRK 142 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 I KFG + + + G Sbjct: 143 FCPDAKLVLRIRCEAEKAT----------CPLGKKFGCDPVDEAPSLIRIARSMNLDVIG 192 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + H+GS ++KA + RDL + G+ +D+GGG + H + Sbjct: 193 ISFHVGSGCSDFPIYYKAISIARDLFDYAKQLGYEFNLLDIGGGFPGS-HGTSIDEVALI 251 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS-------ADKTFVILDVAM 308 + + ++F + +II EPGR+ VA L+T V S + D+ L+ + Sbjct: 252 INTALDKFFADKSVRIISEPGRYYVASAFTLLTNVQSKRACLDPATGTIDRMMYYLNDGV 311 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 L+D + ++ + I GP C+ D + + + D + Sbjct: 312 YASFNCILFDHQYPQPRLIGQQS-GKTYKSTIWGPSCDALDQVVETINLPELQIEDWVVF 370 Query: 369 EKTGAYGAVQSGTYNSRLLIPE 390 + GAY + +N L Sbjct: 371 DNMGAYTIPIASPFNGFPLPKV 392 >gi|145298270|ref|YP_001141111.1| ornithine decarboxylase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851042|gb|ABO89363.1| ornithine decarboxylase [Aeromonas salmonicida subsp. salmonicida A449] Length = 417 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 79/378 (20%), Positives = 136/378 (35%), Gaps = 15/378 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L +P A+ K Y A D + YALK ++AV+ L G+ Sbjct: 43 DYRQLVEQFGSPLLLLDKAAVRKQYRALVAALP--DVRLHYALKPLPHEAVVSVLKEEGA 100 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ + GE+ + V R + + K +I AL+ G F ++ EL+ Sbjct: 101 CFDLATNGEVDLVRSQGVRPGRCIHTHPIKRDSDIRYALEYGCTVFVYDNPLELEKFIPY 160 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + ++F + G KFG Q L A G+K+ G+ Sbjct: 161 KDEVKLLLRVSF----------PNPETKGDLSKKFGCTPEQALPLLQLAH-AKGIKVMGL 209 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GSQ+ +A R++ +Q G +D+GGG + Y Sbjct: 210 SFHVGSQVPHARRHVQAIDACREIMEQAWDLGLKPWVLDIGGGFPVDYDGGEFDIDGFCA 269 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + I EPGRF+ ++ V+ DK + LD + L Sbjct: 270 PIREALAKLPATVQKIAEPGRFISPPAMTSISSVMGKAHRGDKIWYYLDDGLYGSYNGQL 329 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 YD G+ ++ + GP C++ D I + G+L+ GAY Sbjct: 330 YDHVTYPVSTPYARGE--QHNSVLSGPTCDSVDVIREEIMLPDLAIGELVVGRVMGAYTW 387 Query: 377 VQSGTYNSRLLIPEIMVN 394 + T+N ++++ Sbjct: 388 ASASTFNFFPKASILILD 405 >gi|170736652|ref|YP_001777912.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia cenocepacia MC0-3] gi|254249328|ref|ZP_04942648.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia PC184] gi|124875829|gb|EAY65819.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia PC184] gi|169818840|gb|ACA93422.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia cenocepacia MC0-3] Length = 402 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 101/406 (24%), Positives = 167/406 (41%), Gaps = 17/406 (4%) Query: 1 MS-AFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA 58 M+ + L A+++ + +LA+ TPF+ Y+ AI+ + Y+ Sbjct: 1 MNRSLTRRHDVLFADSIDVTRLANRAGSTPFFVYARAAIDARVCQLRAKLPAS-IQLHYS 59 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN AV+ LA G D+ S EL AL A +P ++I F+G GKT +E+ A+ SG Sbjct: 60 IKANPMPAVVHHLAMRIDGFDVASGAELALALNAGMPPDQIGFAGPGKTREELRCAVASG 119 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + +L L G + + RVNPD TH + G +FGI Q+ Sbjct: 120 VNVHIESLT-QLHLLAALGWEQGLRPRVTIRVNPDFQI-THAGMRMGGGATQFGIDAEQV 177 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 +L ST ++G + GSQ + + +A + +L +L S+ G Sbjct: 178 PALLQELSTCDVT-LAGFHVFWGSQCLRPATVVEAQRRSAELVMKLASDLPLPPRYVNLG 236 Query: 239 GLGIAYHSDHRPP------SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 G + + P + +A L + + +LE GR+LV + G V +VI Sbjct: 237 GGFGIPYFEGEVPLDLDAVAQPMHAWLSRMHRALPGVRPVLEFGRYLVGEAGAYVCRVID 296 Query: 293 IKKSADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 K S TF++ D ++ + + N GD IVG C Sbjct: 297 RKVSRGTTFLVTDGGLHHHLAASGNFGQVLRRNFPVVLGNRLGDTPTERCHIVGCSCTPL 356 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 D I + + GD + + ++GAY S + E++V Sbjct: 357 DRIVDDVLLPEAHIGDFVVVLQSGAYARSASPRDFLGHPEAIEMLV 402 >gi|301621450|ref|XP_002940066.1| PREDICTED: ornithine decarboxylase-like [Xenopus (Silurana) tropicalis] Length = 417 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 93/408 (22%), Positives = 148/408 (36%), Gaps = 32/408 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K Y FS + YA+K NS +AV++ LA LG+G S EL Sbjct: 30 FYVADLGDIIKKYWQFSKGLPRVKP--FYAMKCNSTRAVLQMLAFLGTGFACCSMAELDM 87 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L VPA IVF K + I A + G+ + ESEL L I Sbjct: 88 VLRMGVPAADIVFVNPCKQVSHIRYAAEYGVRKMTFDCESELLKLAASYPQAEMILQIV- 146 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T K G+ I + +L A +L + + GV H GS+ Sbjct: 147 ---------TDNKEPWHTLSGICGVYISECENLLKKAKSL-NMDVFGVSFHTGSRCKDTH 196 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 SFHKA + R + ++ GH ++ +D+GGG S ++ + + N Sbjct: 197 SFHKAIEDARKVFDIGKNLGHQMRLLDIGGGFPGDSESRPTFEKFAEVIRISLDQSFPCN 256 Query: 267 LQCKIILEPGRFLVADVGILVTKV--------ISIKKSADKTFVILDVAMNDFMRPTLYD 318 +II EPGRF V + ++ ++V+ D F + Sbjct: 257 EDVQIIAEPGRFYVTSAFTAALNIVTKKVVTKKDGEERRQFSYVLNDGIFGSFFLNYMQM 316 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + + + + GP C + D I + + GD + GAY Sbjct: 317 EETWPVVGKDFDTAQELFPSILWGPTCASEDKIVKDIDLPELEMGDWIIFPNMGAYSMSM 376 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWLQKTPKQ 426 + +N+ V R T ++++ + + LQ P+ Sbjct: 377 TSNFNAFSTPKIYFVFT------RKMWTVGQILKKEKL---LQNHPQN 415 >gi|327261305|ref|XP_003215471.1| PREDICTED: ornithine decarboxylase-like [Anolis carolinensis] Length = 460 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 88/382 (23%), Positives = 143/382 (37%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + K +L + A + YA+K N + AV+K LA LG+G D S+ E++ Sbjct: 40 FYVADLGDVLKKHLRWYKALPRVSP--FYAVKCNDSIAVVKILAALGAGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSVGVPPERIIYANPCKQVSQIKHAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L I GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKELDL-DIIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + ++ + + + Sbjct: 207 TFVQAISDARCVFDMGAELGFSMYLLDIGGGFPGSEDVKLKFEEITNVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISI---------------KKSADKTFVILDVAMNDF 311 KII EPGR+ VA L +I+ + + + D F Sbjct: 267 SGVKIIAEPGRYYVASAFTLAVNIIAKKVVIKEQTGSDDEEEQNDKTLMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + I GP C+ D I + + GD + E Sbjct: 327 NCILYDHAHVKPVLQKRPKPDERYYSCSIWGPTCDGLDRIVELCAMPELQVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPTIYYV 408 >gi|301621448|ref|XP_002940065.1| PREDICTED: ornithine decarboxylase-like [Xenopus (Silurana) tropicalis] Length = 430 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 84/389 (21%), Positives = 136/389 (34%), Gaps = 27/389 (6%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +A Q FY I++ + F + YA+K NS V++ LA LG+G Sbjct: 49 NNIAQGHQDAFYVADLGDIKQKHWRFMKELPRVKP--FYAVKCNSTNEVLQMLATLGTGF 106 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S GE+ L VPA IV++ K + I A G+ + E+EL + Sbjct: 107 DCASMGEIDMVLRMGVPAADIVYANPCKQVSHIKYAAAHGVCKMTFDCEAELFKIAAFHP 166 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 IA T + + K+G + Q L A L +++ GV Sbjct: 167 KAEMILRIA----------TDDRDAWCALSSKYGALVEQCEDLLKTAKNL-NIQVIGVSF 215 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 H GS SF KA + R + + + G+ ++ +D+GGG +D Sbjct: 216 HTGSGCKNTHSFCKAIEDARKVFEIGKKLGYQMRLLDIGGGFSGNSEFRPTFEEFADVIR 275 Query: 259 L--IHQYFGNLQCKIILEPGRFLV------ADVGILVTKVISIKKSADKTFVILDVAM-- 308 + N + +II EPGR+ V A I +V + + Sbjct: 276 QSLNQYFPNNKEVEIISEPGRYYVESAFTVALNIITKKEVYEKGADGNSRRKFSYILNDG 335 Query: 309 ----NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 + + A ++ +++ GP C D + + GD Sbjct: 336 VYGTFLDFYLVKEKQKLKPLLGKDFATEQELFPSNLWGPTCTNVDKLVNEFYLPELETGD 395 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GAY S T+N V Sbjct: 396 WVIFPNMGAYSISMSTTFNGFPQPKVYFV 424 >gi|328870102|gb|EGG18477.1| group IV decarboxylase [Dictyostelium fasciculatum] Length = 488 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 79/377 (20%), Positives = 139/377 (36%), Gaps = 29/377 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K Y + YA+K N Q V+K L LG+ D S E+ Sbjct: 116 FFVADIATIIKQYQKWIKHLPH--VTPYYAVKCNPTQGVLKVLEALGTSFDCASRNEIET 173 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ K I + A + ++ SEL+ + + IA Sbjct: 174 VLNLGVDPSRIIYANPCKQISALKFARLHNVKMMTFDNVSELEKIEKFFPEAELVLRIAP 233 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S + KFG+ I L A + +K+ GV H+GS Sbjct: 234 D----------DSKSLMRFGTKFGVHIDDCSDLLEMAKEM-NLKVVGVSFHVGSGCFDAS 282 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A ++++ + +++G + +D+GGG + D +D + Sbjct: 283 AYDAALEMVKSVFDMAKTHGMTLNLVDIGGGFTGS--DDVMFGKFTDAIRNKTKELFAPD 340 Query: 269 CKIILEPGRFLVADVGILVTKVISIKK-SADKTFVILDVAMNDFMRPTLY---------- 317 +II EPGR+ A +L VIS + + N+ + Y Sbjct: 341 VRIIAEPGRYFAAMSHVLAVTVISKRIIKQEDNRQHPRRTSNNLRQYNYYLADGVYGSFN 400 Query: 318 ---DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + + + GP C++ D IA + +I + GD LY + GAY Sbjct: 401 NIQFDHAKPTPCLLKPSHKQPTPCTLFGPTCDSIDVIARDTQIPELKIGDWLYFKDMGAY 460 Query: 375 GAVQSGTYNSRLLIPEI 391 + ++N + P Sbjct: 461 TMASASSFNGFVPPPIY 477 >gi|126303210|ref|XP_001371947.1| PREDICTED: similar to ornithine decarboxylase [Monodelphis domestica] Length = 461 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 87/382 (22%), Positives = 141/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWYKALPR--VTPFYAVKCNDSRAILKTLAAVGAGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + S + + + Sbjct: 207 TFVQAVSDARCVFDMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEISSVINPALDKYFPPD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEDEANDQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILFDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPTIYYV 408 >gi|325919586|ref|ZP_08181598.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas gardneri ATCC 19865] gi|325549922|gb|EGD20764.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas gardneri ATCC 19865] Length = 869 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 107/387 (27%), Positives = 178/387 (45%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + +D YA+KAN++ A++ L Sbjct: 493 HAERAHLLSLSKA-GTPRYVYHLPTVRARAHALAQ-IAAVDQR-YYAIKANAHPAILMAL 549 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GELRR R++F+ E + G+ E Sbjct: 550 EQAGFGLECVSHGELRRVFDTLPELSPRRVLFTPSFAPKAEYEAGFALGVTVTVDNVE-- 607 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 +R + + + R++ H+K++TG K KFG+ ++ A TL Sbjct: 608 ---ALRRWPEVFRGRNVWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVELARTLE 664 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 665 VT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 719 Query: 250 PPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + ++ +EPGR+LVA+ G+L+ +V + + V LD M Sbjct: 720 PFDLELWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLLAQVTQVIEKDGVQRVGLDAGM 779 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP-RPGDLLY 367 N +RP LYDA+ ++ DIVGPICE+ D R++ PGD++ Sbjct: 780 NTLIRPALYDAW-HDIENLSQLDAPADGAFDIVGPICESSDVFGKRRRLPAATAPGDVML 838 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + +GAYG + TYN R L E +++ Sbjct: 839 VADSGAYGYSMASTYNQRELPREEVID 865 >gi|188577968|ref|YP_001914897.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188522420|gb|ACD60365.1| bifunctional diaminopimelate decarboxylase/asparta [Xanthomonas oryzae pv. oryzae PXO99A] Length = 850 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 110/387 (28%), Positives = 179/387 (46%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + +D YA+KAN++ A++ L Sbjct: 474 HAERAHLLSLSKA-GTPRYAYHLPTVRARAHALAQ-IAAVDQR-YYAIKANAHPAILMAL 530 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GE+RR A R++F+ E A G+ E Sbjct: 531 EQAGFGLECVSHGEVRRVFQALPELSPRRVLFTPSFAPKAEYAAAFALGVTVTVDNVE-- 588 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + I R++ H+K++TG K KFG+ ++ A TL Sbjct: 589 ---ALRNWPEVFRGRNIWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLE 645 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 646 VT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 700 Query: 250 PPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + ++ +EPGR+LVA+ G+L+ V + + V LD M Sbjct: 701 PFDLDVWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLLASVTQVIEKDGVQRVGLDAGM 760 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR-PGDLLY 367 N +RP LYDA+H+I + D+VGPICE+ D R++ PGD++ Sbjct: 761 NTLIRPALYDAWHDIENLSQLDAPADS-TFDVVGPICESSDVFGKRRRLPAATMPGDVVL 819 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + TGAYG + TYN R L E +++ Sbjct: 820 VADTGAYGYSMASTYNQRELPREEVID 846 >gi|58581056|ref|YP_200072.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425650|gb|AAW74687.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 869 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 110/387 (28%), Positives = 179/387 (46%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + +D YA+KAN++ A++ L Sbjct: 493 HAERAHLLSLSKA-GTPRYAYHLPTVRARAHALAQ-IAAVDQR-YYAIKANAHPAILMAL 549 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GE+RR A R++F+ E A G+ E Sbjct: 550 EQAGFGLECVSHGEVRRVFQALPELSPRRVLFTPSFAPKAEYAAAFALGVTVTVDNVE-- 607 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + I R++ H+K++TG K KFG+ ++ A TL Sbjct: 608 ---ALRNWPEVFRGRNIWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLE 664 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 665 VT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 719 Query: 250 PPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + ++ +EPGR+LVA+ G+L+ V + + V LD M Sbjct: 720 PFDLDVWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLLASVTQVIEKDGVQRVGLDAGM 779 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR-PGDLLY 367 N +RP LYDA+H+I + D+VGPICE+ D R++ PGD++ Sbjct: 780 NTLIRPALYDAWHDIENLSQLDAPADS-TFDVVGPICESSDVFGKRRRLPAATMPGDVVL 838 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + TGAYG + TYN R L E +++ Sbjct: 839 VADTGAYGYSMASTYNQRELPREEVID 865 >gi|307591535|ref|YP_003900334.1| Diaminopimelate decarboxylase [Cyanothece sp. PCC 7822] gi|306986389|gb|ADN18268.1| Diaminopimelate decarboxylase [Cyanothece sp. PCC 7822] Length = 409 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 87/401 (21%), Positives = 161/401 (40%), Gaps = 18/401 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++L + +P Y Y + + + + +T +A N N A++K LG GL Sbjct: 23 QELLKIYHSPLYLYQGEVLRQEISHITRSIPYHNTRFQFATVTNGNIALLKIFKELGWGL 82 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 + G++ L A ++ IV+SG EI+ I N++S S+L+ Q Sbjct: 83 HANTPGDIYLGLKAGFKSDNIVYSGSNLNRQEIEQLFNWNIKILNLDSVSQLQLCCQIYE 142 Query: 139 S-LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 GK P ++ T + + E Y + G+KI G+ Sbjct: 143 ELKGKLTPPKLGFRLNLPELTGESRIGIRPE---------EFPQALYIAQSAGLKIQGLH 193 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY- 256 + G+ + ++F + L Q + ++D GGG G Y + Sbjct: 194 FYRGTGTNATKAFTGVIETLIKTCQ----LLPDWNYLDFGGGFGYRYQHQGIQFDWGIFG 249 Query: 257 -ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 A N + ++I+EPGR ++A G L+ +V+S+K +K + +D + + P+ Sbjct: 250 EALTEALNKLNRKIELIIEPGRAVIAACGTLLAQVVSVKWQENKQIIGVDTTVANLSVPS 309 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 ++ Y EI D+ G + D++ N ++ GD++ I GAYG Sbjct: 310 VHGGYREIVTWKE--NTEQLYLTDVCGNTTYSRDYLGKNCQLPALEIGDMIGILDVGAYG 367 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 S + R E+++ G +IR R + L+ + Sbjct: 368 YAMSSHFLHRPRAAEVLLEGKTHKLIRRREDYSILLNNQVL 408 >gi|73979731|ref|XP_856512.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 4 [Canis familiaris] Length = 457 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 86/378 (22%), Positives = 142/378 (37%), Gaps = 26/378 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++ ++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAREL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPAD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK-----------KSADKTFVILDVAMNDFMRPT 315 ++I EPGR+ VA L +I+ K + + D F Sbjct: 267 SGVRVIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDGTYKGFMYYVNDGVYGSFNCIL 326 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 A+ + P D + I GP C+ D I + GD + E GAY Sbjct: 327 YDHAHVKPLLQKRPKPDEKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYT 386 Query: 376 AVQSGTYNSRLLIPEIMV 393 + T+N V Sbjct: 387 VAAASTFNGFQRPTIYYV 404 >gi|194863624|ref|XP_001970532.1| GG23323 [Drosophila erecta] gi|190662399|gb|EDV59591.1| GG23323 [Drosophila erecta] Length = 396 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 81/383 (21%), Positives = 158/383 (41%), Gaps = 24/383 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 E L++L +++E+ + + YA+K N + V++ LA Sbjct: 23 IEECDLQRLDQA----LNICDLSSVERKLRLWQRLLPRIKP--FYAVKCNDDPVVVRLLA 76 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 LG+G D S+ E++ L VP ERI+F+ + + ++ A + + V++E E+ Sbjct: 77 ELGAGFDCASKNEVKLVLGFDVPPERIIFANPCRPVSHLEYAKEHQVANGTVDNEFEVYK 136 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L+ N + + K + DKFG + + +K Sbjct: 137 LHTHYP----------NSNLIVRFKSEAKEAQCPLGDKFGCDADVDAAALMLLAKSLDLK 186 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++G H+GS ++E++ +A K ++L + G+++ +D+GGG + + Sbjct: 187 VTGTSFHVGSGCSELEAYDRAIKKAKNLFKFGALLGYDMDFLDIGGGFPGSDDGKFEKIA 246 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK-------TFVILD 305 + + ++F N + +II EPGRF VA LV K+ + ++ ++ + + D Sbjct: 247 E-SVNTSVQRHFPNERVRIIAEPGRFFVAAACTLVCKIHAKREIRNEAGKLDTVMYYLND 305 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 F + ++ A + + I GP C+ D I+ + + GDL Sbjct: 306 GVYGSFNCILYDHQVVTAEHYLDNADSLPQLKSLIWGPSCDALDKISEDLHLPNLNRGDL 365 Query: 366 LYIEKTGAYGAVQSGTYNSRLLI 388 L GAY + +N L Sbjct: 366 LGFRNMGAYTMPIASPFNGFELP 388 >gi|268370110|ref|NP_001161238.1| ornithine decarboxylase [Gallus gallus] Length = 464 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 87/377 (23%), Positives = 137/377 (36%), Gaps = 30/377 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K ++ + A YA+K N ++AV+KTLA LG+G D S+ E++ Sbjct: 44 FYVADLGDIVKKHMRWHKALPR--VTPFYAVKCNDSEAVVKTLAVLGAGFDCASKTEIQL 101 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A SG+ +SE EL + + I Sbjct: 102 VQSIGVPPERIIYANPCKQLSQIKHAANSGVRMMTFDSEVELMKIARAHPKAKLVLRIT- 160 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L I GV H+GS E Sbjct: 161 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKELDLA-IVGVSFHVGSGCTDPE 210 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + + + + + Sbjct: 211 TFVQAISDARCVFDMGAELGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPLD 270 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 + II EPGR+ VA L + + + D F Sbjct: 271 SEVTIIAEPGRYYVASAFTLAVNIIAKKIVSKEQTGSDDEDDVNDKTLMYYVNDGVYGSF 330 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D I GP C+ D I + + GD + E Sbjct: 331 NCILYDHAHVKPVLQKRPKPDDGCYSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENM 390 Query: 372 GAYGAVQSGTYNSRLLI 388 GAY + T+N Sbjct: 391 GAYTVAAASTFNGFQRP 407 >gi|118374|sp|P27118|DCOR_CHICK RecName: Full=Ornithine decarboxylase; Short=ODC gi|63713|emb|CAA45965.1| ornithine decarboxylase [Gallus gallus] Length = 450 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 87/377 (23%), Positives = 137/377 (36%), Gaps = 30/377 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K ++ + A YA+K N ++AV+KTLA LG+G D S+ E++ Sbjct: 30 FYVADLGDIVKKHMRWHKALPR--VTPFYAVKCNDSEAVVKTLAVLGAGFDCASKTEIQL 87 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A SG+ +SE EL + + I Sbjct: 88 VQSIGVPPERIIYANPCKQLSQIKHAANSGVRMMTFDSEVELMKIARPHPKAKLLLRIT- 146 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L I GV H+GS E Sbjct: 147 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKELDLA-IVGVSFHVGSGCTDPE 196 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + + + + + Sbjct: 197 TFVQAISDARCVFDMGAELGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPLD 256 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 + II EPGR+ VA L + + + D F Sbjct: 257 SEVTIIAEPGRYYVASAFTLAVNIIAKKIVSKEQTGSDDEDDVNDKTLMYYVNDGVYGSF 316 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D I GP C+ D I + + GD + E Sbjct: 317 NCILYDHAHVKPVLQKRPKPDDGCYSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENM 376 Query: 372 GAYGAVQSGTYNSRLLI 388 GAY + T+N Sbjct: 377 GAYTVAAASTFNGFQRP 393 >gi|194220974|ref|XP_001502373.2| PREDICTED: similar to Ornithine decarboxylase (ODC) [Equus caballus] Length = 461 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 89/423 (21%), Positives = 151/423 (35%), Gaps = 45/423 (10%) Query: 1 MSAFKYFEGSLHA----ENVSLEKLAHV----VQT-----PFYCYSTTAIEKNYLTFSNA 47 M+ F G E + + + V + FY I K +L + A Sbjct: 1 MNNFS--NGEFDCHFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKA 58 Query: 48 FDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKT 107 YA+K N ++ ++KTLA +G+G D S+ E++ + VP ERI+++ K Sbjct: 59 LPR--VTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQ 116 Query: 108 IDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK 167 + +I A +G+ +SE EL + + IA T + + Sbjct: 117 VSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA----------TDDSKAVCRL 166 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 KFG + L A L + + GV H+GS E+F +A R + Sbjct: 167 SVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPETFVQAISDARCVFDMGAEI 225 Query: 228 GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGI 285 G N+ +D+GGG + + + + + + ++I EPGR+ VA Sbjct: 226 GFNMYLLDIGGGFPGSEDVKLKFEEVTSVINPALDKYFPSDSGVRVIAEPGRYYVASAFT 285 Query: 286 LVTKV---------------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 L + + + D F A+ + P Sbjct: 286 LAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPK 345 Query: 331 GDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE 390 D + + I GP C+ D I + + GD + E GAY + T+N Sbjct: 346 PDEKYYSSSIWGPTCDGLDRIVERCNLPEMQVGDWMLFENMGAYTVAAASTFNGFQRPTI 405 Query: 391 IMV 393 V Sbjct: 406 YYV 408 >gi|308205619|gb|ADO19084.1| diaminopimelate decarboxylase [Nostoc flagelliforme str. Sunitezuoqi] Length = 458 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 82/426 (19%), Positives = 157/426 (36%), Gaps = 42/426 (9%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++L + +P Y Y+ + + + A T +A N N A++K G GL Sbjct: 38 QELLNNYGSPLYVYNGDRLGETIERITKAVSYPRTQFRFASVTNGNIALLKIFRSFGWGL 97 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 + G++ L A A IV+SG E+ L G+ N +S ++L+ + Sbjct: 98 HANTPGDIYLGLQAGFDASEIVYSGSNLNRSEMLEVLNWGVTTLNFDSLAQLQLCCEVL- 156 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 G++ I + ++ T + E+ FG I + S L + +G + Sbjct: 157 PKGREKNIRLGLRLNLPEITGDSRIGVRPEE-FGDAIALTGEVGIKLSGLHFYRGTGTNA 215 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 A +L + +++D GGG G YH + + + Sbjct: 216 TAAFTQVIDTVIATAQQL------------PDWEYLDFGGGFGYPYHHNKTAFDWEIFGA 263 Query: 259 LIHQYFGN--LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + + + +++EPGR +A L+ +V+S+K +K V +D + + P++ Sbjct: 264 ELTKRITRLGRKIDLVIEPGRAAIAGCATLLAQVVSVKWQGEKQIVGVDTTVANLSVPSV 323 Query: 317 YDAYHEINYIVNPAGDRLHI--------------------------HADIVGPICETGDF 350 + Y EI + DI G + D+ Sbjct: 324 HGGYREIITWKQANKSSIPHSPLLRLTSAKLGTSRSVQVPTPDSLFKTDICGNTTYSRDY 383 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + N ++ GD++ I GAYG S + R E+++ +IR R + L Sbjct: 384 LGKNCQLPALEIGDIVAILDVGAYGYAMSSHFLHRPKPAEVLLENCTHRLIRRREDYSVL 443 Query: 411 IELDSI 416 + + Sbjct: 444 LTNQML 449 >gi|262204912|dbj|BAI48036.1| ornithine decarboxylase 1 [Sus scrofa] Length = 461 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 91/421 (21%), Positives = 158/421 (37%), Gaps = 41/421 (9%) Query: 1 MSAF-------KYFEGSLHAENVSLEKLAHVVQT----PFYCYSTTAIEKNYLTFSNAFD 49 M++F + + A+++ +K+ V T FY I K +L + A Sbjct: 1 MNSFSNEELDCHFLDEGFTAKDILDQKINEVSATDDKDAFYVADLGDILKKHLRWLKALP 60 Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 YA+K N ++ +++TLA +G+G D S+ E++ + VP ERI+++ K + Sbjct: 61 R--VTPFYAVKCNDSRTIVQTLAAIGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVS 118 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 +I A +G+ +SE EL + + IA T + + Sbjct: 119 QIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA----------TDDSKAVCRLSV 168 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 KFG + L A L + GV H+GS E+F +A R + G Sbjct: 169 KFGATLKTSRLLLERARDLDI-DVIGVSFHVGSGCTDPETFAQAISDARCVFDMGAEVGF 227 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILV 287 ++ +D+GGG + + + + + + +II EPGR+ VA L Sbjct: 228 SMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPPDSGVRIIAEPGRYYVASAFTLA 287 Query: 288 TKVISIK---------------KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 +I+ K + + D F A+ + P D Sbjct: 288 VNIIAKKLVLKEQTGSDDEEEASEQTFMYYVNDGVYGSFNCILYDHAHVQPLLQKRPKPD 347 Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 + + I GP C+ D I ++ GD + E GAY + T+N Sbjct: 348 EKYYSSSIWGPTCDGLDRIVERCRLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPAIYY 407 Query: 393 V 393 V Sbjct: 408 V 408 >gi|281348976|gb|EFB24560.1| hypothetical protein PANDA_010453 [Ailuropoda melanoleuca] Length = 427 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 86/392 (21%), Positives = 142/392 (36%), Gaps = 30/392 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A + YA+K N ++ ++KTLA +G+G D S+ E++ Sbjct: 6 FYVADLGDILKKHLRWLKALPRVSP--FYAVKCNDSRTIVKTLATIGTGFDCASKTEIQL 63 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 64 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 122 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 123 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAREL-NIDVIGVSFHVGSGCTDPE 172 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + + + + + Sbjct: 173 TFVQAISDARCVFDMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPAD 232 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 233 SGVRIIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 292 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + I GP C+ D I + GD + E Sbjct: 293 NCILYDHAHVKPLLQKRPKPDEKYYSTSIWGPTCDGLDRIVERCDLPEMHVGDWMVFENM 352 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 GAY + T+N V +R Sbjct: 353 GAYTVAAASTFNGFQRPTIYYVMSGPTWQLRQ 384 >gi|37787285|gb|AAO92750.1| ornithine decarboxylase [Paralichthys olivaceus] Length = 460 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 92/378 (24%), Positives = 146/378 (38%), Gaps = 31/378 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + K +L + A + YA+K N ++AV+ TLA LG+G D S+ E++ Sbjct: 40 FYVCDLGDVLKKHLRWMRALPRITP--FYAVKCNDSRAVVTTLASLGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V RI+++ K + +I A G+ +SE EL + + + IA Sbjct: 98 VQSLGVDPSRIIYANPCKQVSQIKYASAHGVQMMTFDSEVELMKVARCHDNAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG P+ L A L + GV H+GS + Sbjct: 157 ---------TDDSKAVCRLSVKFGAPLKACRGLLERAKELGL-NVIGVSFHVGSGCTDSK 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ +A R + G N+ +D+GGG + + + + + + + + Sbjct: 207 TYMQAIADARCVFHMGDELGFNMDLLDIGGGFPGSDNVELKFEEITAVINSALDKYFSAD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY--------- 317 KII EPGRF VA LV +I+ K D+ V D R +Y Sbjct: 267 SGVKIIAEPGRFYVASAYTLVVNIIAKKVIMDEDSVSDDEDEGTNDRTLMYYVNDGVYGS 326 Query: 318 -------DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 A+ P D + I GP C+ D I + + GD L E Sbjct: 327 FNCILYDHAHCMPILHKKPKPDEIMYPCSIWGPTCDGLDRIVEQCYLPDMQVGDWLVFEN 386 Query: 371 TGAYGAVQSGTYNSRLLI 388 GAY S T+N Sbjct: 387 MGAYTVAASSTFNGFQRP 404 >gi|301772282|ref|XP_002921559.1| PREDICTED: ornithine decarboxylase-like [Ailuropoda melanoleuca] Length = 461 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 86/392 (21%), Positives = 142/392 (36%), Gaps = 30/392 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A + YA+K N ++ ++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPRVSP--FYAVKCNDSRTIVKTLATIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAREL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPAD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDEKYYSTSIWGPTCDGLDRIVERCDLPEMHVGDWMVFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 GAY + T+N V +R Sbjct: 387 GAYTVAAASTFNGFQRPTIYYVMSGPTWQLRQ 418 >gi|149622083|ref|XP_001513468.1| PREDICTED: similar to ornithine decarboxylase [Ornithorhynchus anatinus] Length = 461 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 90/421 (21%), Positives = 151/421 (35%), Gaps = 41/421 (9%) Query: 1 MSAFKYFEGSLHA--ENVSLEKLAHV----VQT-----PFYCYSTTAIEKNYLTFSNAFD 49 M+ F E E + + + V + FY + K +L + A Sbjct: 1 MNNFSNDEFDFTFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDVLKKHLRWYKALP 60 Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 YA+K N ++A++KTLA LG+G D S+ E++ + V ERI+++ K + Sbjct: 61 R--VTPFYAVKCNDSKAIVKTLAALGAGFDCASKTEIQLVQSIGVSPERIIYANPCKQVS 118 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 +I A SG+ +SE EL +N+ IA T + + Sbjct: 119 QIKYAANSGVQMMTFDSEVELMKVNRAHPKAKLVLRIA----------TDDSKAVCRLSV 168 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 KFG + L A L + + GV H+GS ++F +A R + G Sbjct: 169 KFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPDTFVQAVTDARCVFDMGAELGF 227 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILV 287 ++ +D+GGG + + + + + + +II EPGR+ VA L Sbjct: 228 DMYLLDIGGGFPGSEDVKLKFEEITSVINPALEKYFPSDSGVRIIAEPGRYYVASAFTLA 287 Query: 288 TKV---------------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 + + + D F A+ + P D Sbjct: 288 VNIIAKKVVLKEQTGSDDEDDVNDKTIMYYVNDGVYGSFNCILYDHAHVKPILQKRPKPD 347 Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 + I GP C+ D I + + GD + E GAY + T+N Sbjct: 348 ESYYSCSIWGPTCDGLDRIVERCDMPELQVGDWMLFENMGAYTVAAASTFNGFQRPTIYY 407 Query: 393 V 393 V Sbjct: 408 V 408 >gi|188990816|ref|YP_001902826.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas campestris pv. campestris str. B100] gi|167732576|emb|CAP50770.1| aspartate kinase / diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris] Length = 896 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 109/387 (28%), Positives = 175/387 (45%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + +D YA+KANS+ A++ L Sbjct: 520 HAERAHLLTLSKA-GTPRYVYHLPTVRARAQALAQ-IAAVDQR-YYAIKANSHPAILMAL 576 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GELRR R++F+ E + A G+ E Sbjct: 577 EQAGFGLECVSHGELRRVFDTLPELSPRRVLFTPSFAPRSEYEAAFALGVTVTVDNVE-- 634 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 +R L + + R++ H+K++TG K KFG+ ++ A TL Sbjct: 635 ---ALKRWPELFRGRNVWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVELARTLE 691 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 692 VT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 746 Query: 250 PPSSSDYASLIHQYFGNLQCKIIL-EPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + EPGR+LVA+ G+L+ + + + V LD M Sbjct: 747 PFDLELWAKGLAEVKAVHPGFRLAIEPGRYLVAEAGVLLAQATQVIEKDGVHRVGLDAGM 806 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP-RPGDLLY 367 N +RP LYDA+ ++ G D+VGPICE+ D R++ PG+++ Sbjct: 807 NSLIRPALYDAW-HDIENLSQLGAPADGSFDVVGPICESSDVFGKRRRLPAATAPGNVML 865 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 I GAYG + TYN R L E +++ Sbjct: 866 IADAGAYGYSMASTYNQRELPREEVID 892 >gi|21232172|ref|NP_638089.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767699|ref|YP_242461.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas campestris pv. campestris str. 8004] gi|21113926|gb|AAM42013.1| bifunctional diaminopimelate decarboxylase/aspartate kinase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573031|gb|AAY48441.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris str. 8004] Length = 869 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 109/387 (28%), Positives = 175/387 (45%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + +D YA+KANS+ A++ L Sbjct: 493 HAERAHLLTLSKA-GTPRYVYHLPTVRARAQALAQ-IAAVDQR-YYAIKANSHPAILMAL 549 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GELRR R++F+ E + A G+ E Sbjct: 550 EQAGFGLECVSHGELRRVFDTLPELSPRRVLFTPSFAPRSEYEAAFALGVTVTVDNVE-- 607 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 +R L + + R++ H+K++TG K KFG+ ++ A TL Sbjct: 608 ---ALKRWPELFRGRNVWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVELARTLE 664 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 665 VT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 719 Query: 250 PPSSSDYASLIHQYFGNLQCKIIL-EPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + EPGR+LVA+ G+L+ + + + V LD M Sbjct: 720 PFDLELWAKGLAEVKAVHPGFRLAIEPGRYLVAEAGVLLAQATQVIEKDGVHRVGLDAGM 779 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP-RPGDLLY 367 N +RP LYDA+ ++ G D+VGPICE+ D R++ PG+++ Sbjct: 780 NSLIRPALYDAW-HDIENLSQLGAPADGSFDVVGPICESSDVFGKRRRLPAATAPGNVML 838 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 I GAYG + TYN R L E +++ Sbjct: 839 IADAGAYGYSMASTYNQRELPREEVID 865 >gi|172072645|ref|NP_001116455.1| ornithine decarboxylase [Sus scrofa] gi|170673179|gb|ACB30110.1| ornithine decarboxylase 1.ODC1 [Sus scrofa] Length = 461 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 91/421 (21%), Positives = 158/421 (37%), Gaps = 41/421 (9%) Query: 1 MSAF-------KYFEGSLHAENVSLEKLAHVVQT----PFYCYSTTAIEKNYLTFSNAFD 49 M++F + + A+++ +K+ V T FY I K +L + A Sbjct: 1 MNSFSNEELDCHFLDEGFTAKDILDQKINEVSATDDKDAFYVADLGDILKKHLRWLKALP 60 Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 YA+K N ++ +++TLA +G+G D S+ E++ + VP ERI+++ K + Sbjct: 61 R--VTPFYAVKCNDSRTIVQTLAAIGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVS 118 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 +I A +G+ +SE EL + + IA T + + Sbjct: 119 QIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA----------TDDSKAVCRLSV 168 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 KFG + L A L + GV H+GS E+F +A R + G Sbjct: 169 KFGATLKTSRLLLERARDLDI-DVIGVSFHVGSGCTDPETFAQAISDARCVFDMGAEVGF 227 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILV 287 ++ +D+GGG + + + + + + +II EPGR+ VA L Sbjct: 228 SMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPPDSGVRIIAEPGRYYVASAFTLA 287 Query: 288 TKVISIK---------------KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 +I+ K + + D F A+ + P D Sbjct: 288 VNIIAKKLVLKEQTGSDDEEEASEQTFMYYVNDGVYGSFNCILYDHAHVQPLLQKRPKPD 347 Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 + + I GP C+ D I ++ GD + E GAY + T+N Sbjct: 348 EKYYSSSIWGPTCDGLDRIVERCRLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPAIYY 407 Query: 393 V 393 V Sbjct: 408 V 408 >gi|85702213|ref|NP_001030044.1| ornithine decarboxylase-like [Mus musculus] gi|74180789|dbj|BAE25605.1| unnamed protein product [Mus musculus] gi|187466332|emb|CAQ51836.1| novel protein similar to ornithine decarboxylase, structural 1 Odc1 [Mus musculus] gi|220939007|emb|CAM45915.2| novel protein similar to ornithine decarboxylase, structural 1 Odc1 [Mus musculus] gi|223461739|gb|AAI47396.1| Gene model 853, (NCBI) [Mus musculus] gi|223462101|gb|AAI47395.1| Gene model 853, (NCBI) [Mus musculus] Length = 425 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 80/369 (21%), Positives = 127/369 (34%), Gaps = 22/369 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F + + TF A YA+K NSN V+ LA LG+G D S+GEL + Sbjct: 52 FMVADLDVLVSRHRTFLQALPR--VQPFYAVKCNSNPWVLLVLAALGTGFDCASQGELEQ 109 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+F+ K + I A + G+ ++E EL L + I Sbjct: 110 VLGLGVAPSRIIFANPCKAVSHIQFAARCGVQLLTFDNEEELIKLARYHPRARLVLRI-- 167 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T ST KFG + L A L + G H+GS E Sbjct: 168 --------QTLDSQSTFPLHTKFGAHLEACGHLLQVARELGLA-VVGASFHVGSDCHTPE 218 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFGN 266 S+ +A + + GH++ +D+GGG S+ + + + + Sbjct: 219 SYRQAIADCHRVFEMGCKAGHHMSLLDLGGGFPGVKGSEAKFEEVARVINTALAQYFPEE 278 Query: 267 LQCKIILEPGRFLVADVGILVTKVI------SIKKSADKTFVILDVAMNDFMRPTLYDAY 320 ++I EPGRF V +I + + + F Sbjct: 279 TGIEVIAEPGRFYAGSVCTAAVNIIVKKSSLDPGGHRKLAYYLNEGHYGVFRLFLRDPVP 338 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGD-FIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + + + GP C+ D + ++ GD L GAY + S Sbjct: 339 RIPIVVKEFPSEPPLFPCTLYGPTCDAYDRLFSTEVQLPELDVGDWLIFPDMGAYSSSMS 398 Query: 380 GTYNSRLLI 388 T+N + Sbjct: 399 STFNGFPIA 407 >gi|307194296|gb|EFN76671.1| Ornithine decarboxylase [Harpegnathos saltator] Length = 473 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 82/384 (21%), Positives = 135/384 (35%), Gaps = 23/384 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I + + + ++ YA+K N N VI+ LA LG G D S+GE+ + Sbjct: 36 FYVLDIGDIVRKHQIWKEKLPRVEP--YYAVKCNDNLIVIEVLAALGIGFDCASKGEINK 93 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ V + RI+F+ K I A + V++ESEL + + + I Sbjct: 94 VLSVGVDSSRIIFANPAKPASHIRHAAAMRVETMTVDNESELHKIKKLFPTAKIVLRIRC 153 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 KFG + G+ + G+ H+GS Sbjct: 154 DAEIA----------QCPLGMKFGCDPITEAPNLLRLARALGLNVVGISFHVGSGCQDPP 203 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +H+A + + L G +D+GGG + + + +YF Sbjct: 204 VYHRAIRHSKILFDVAIDLGFKPYLLDIGGGYPGNKGTSIDKMAD-TINQALDEYFNTDA 262 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSAD---------KTFVILDVAMNDFMRPTLYDA 319 +I EPGRF VA L T + S + ++ + LYD Sbjct: 263 VHVIAEPGRFYVASAFTLATSIHSKRSVRGDDSSSGAITHNMYYINDGVYGSFNCLLYDH 322 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 H + G I + I GP C+ D + N + GD + E GAY + Sbjct: 323 QHVTPLPLK-DGCGKLIPSSIWGPTCDGLDKVVENILLYDMELGDWILFENMGAYTLPVA 381 Query: 380 GTYNSRLLIPEIMVNGSQFHIIRP 403 +N + +V ++ Sbjct: 382 SPFNGFPVPKVHVVADESIWLLLK 405 >gi|41386599|dbj|BAD08372.1| decarboxylase [Streptomyces halstedii] Length = 414 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 99/396 (25%), Positives = 159/396 (40%), Gaps = 18/396 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH-LG-- 75 E+LA TP Y Y + + + + + YALKAN + V L G Sbjct: 5 EELADQYGTPLYVYDLDRVAEARHDLRTSLPD-EVEIYYALKANPHPQVAGALRSGEGRE 63 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +I S GEL AL A A I+++G GKT E+D A+ G+ F VES ++L+ + Sbjct: 64 CRAEISSVGELAAALTAGFRASEILYTGPGKTDGELDEAIGKGVKTFCVESLTDLQHVGA 123 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A+ G A R+N + T TG +FGI + +PG +I+G Sbjct: 124 VALRHGVVADCLLRINSATASATTSIRMTGTPS-QFGIDSETLVDAMPELRAVPGTRITG 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + S S F+ G ++ +D+GGG Y + P Sbjct: 183 LHFFPLSNARDEASLIGEFRHTIAYAAGLAEETGLTLEFLDIGGGFAHPYGAPGERPVYR 242 Query: 255 DYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + + + +E GR+ + G L+T+V++IK S + FV++D Sbjct: 243 ELRTELAAALDEHFPHWREGAPRIAVETGRYQTSGAGTLLTRVVNIKVSRGRKFVVIDAG 302 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIH----ADIVGPICETGDFIALNRKIALPRPG 363 +N F + + G A + GP+C GD + ++ PG Sbjct: 303 INTFGGMSGLGRLLPVAVEPEYTGSAEATELTDVASLAGPLCTPGDILGREIRLPELAPG 362 Query: 364 DLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQF 398 DL+ I GAYG S + R E+++ G + Sbjct: 363 DLVTIPNAGAYGVTASLLMFLGRPAPVEVVLKGGKV 398 >gi|291439206|ref|ZP_06578596.1| lysine/ornithine decarboxylase [Streptomyces ghanaensis ATCC 14672] gi|291342101|gb|EFE69057.1| lysine/ornithine decarboxylase [Streptomyces ghanaensis ATCC 14672] Length = 460 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 98/407 (24%), Positives = 156/407 (38%), Gaps = 22/407 (5%) Query: 27 TPFY-CYSTTAIEKNYLTFSNAF-----DGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 TP I ++ AF G + +A+KA+ AV++ L G G ++ Sbjct: 39 TPLVALLDVAGIRESAAELRAAFEAVTPPGTPVLHAFAVKASPLVAVLRLLREEGIGAEV 98 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S GEL A AA V ER V KT DE+ AL GI N ++ EL L+ S Sbjct: 99 ASPGELALARAAGVEPERTVLDSPAKTPDELRQALALGIA-VNADNPQELARLDALMQST 157 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ---IHSLYAYASTLPGVKISGVD 197 ++P+ RVNP I + + + +ST KFG+ + + P + Sbjct: 158 DTRSPLGIRVNPQIGSGSIEALSTATATSKFGVALRDEGAREWVVRAYLDRPWLTRLHTH 217 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + A R+ I +D+GGGL + + SD P+ + YA Sbjct: 218 TGSQGIALSLMARGVAEAYALAEEVNRRAGRQQIDTVDIGGGLPVNFASDTTDPTYTQYA 277 Query: 258 SLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 L+ + + + ++ E GR L+A G +V +V K + + + + R Sbjct: 278 RLLSEEVPGLFDGRYGLVTEFGRSLLAKHGTMVARVEYAKSAGGRPVAVTHAGVQVATRT 337 Query: 315 TLYDAYHEINYIVNPAGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + A R D+ GP C GD +A + + L GD + Sbjct: 338 VYAPGAWPLRVAAYDAKGRPKEGPAVVQDVAGPACFAGDLLARGQSLPLLEQGDHAAVLD 397 Query: 371 TGAYGAVQSGTYNSRLLIPEI-MVNGS----QFHIIRPRMTFQELIE 412 TGAY YNS V F ++R T +E++ Sbjct: 398 TGAYYFAHHYAYNSLPRPGVYGFVPDGAGGVSFAVVRRAQTVEEIVA 444 >gi|239930837|ref|ZP_04687790.1| lysine/ornithine decarboxylase [Streptomyces ghanaensis ATCC 14672] Length = 480 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 98/407 (24%), Positives = 156/407 (38%), Gaps = 22/407 (5%) Query: 27 TPFY-CYSTTAIEKNYLTFSNAF-----DGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 TP I ++ AF G + +A+KA+ AV++ L G G ++ Sbjct: 59 TPLVALLDVAGIRESAAELRAAFEAVTPPGTPVLHAFAVKASPLVAVLRLLREEGIGAEV 118 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S GEL A AA V ER V KT DE+ AL GI N ++ EL L+ S Sbjct: 119 ASPGELALARAAGVEPERTVLDSPAKTPDELRQALALGIA-VNADNPQELARLDALMQST 177 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ---IHSLYAYASTLPGVKISGVD 197 ++P+ RVNP I + + + +ST KFG+ + + P + Sbjct: 178 DTRSPLGIRVNPQIGSGSIEALSTATATSKFGVALRDEGAREWVVRAYLDRPWLTRLHTH 237 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + A R+ I +D+GGGL + + SD P+ + YA Sbjct: 238 TGSQGIALSLMARGVAEAYALAEEVNRRAGRQQIDTVDIGGGLPVNFASDTTDPTYTQYA 297 Query: 258 SLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 L+ + + + ++ E GR L+A G +V +V K + + + + R Sbjct: 298 RLLSEEVPGLFDGRYGLVTEFGRSLLAKHGTMVARVEYAKSAGGRPVAVTHAGVQVATRT 357 Query: 315 TLYDAYHEINYIVNPAGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + A R D+ GP C GD +A + + L GD + Sbjct: 358 VYAPGAWPLRVAAYDAKGRPKEGPAVVQDVAGPACFAGDLLARGQSLPLLEQGDHAAVLD 417 Query: 371 TGAYGAVQSGTYNSRLLIPEI-MVNGS----QFHIIRPRMTFQELIE 412 TGAY YNS V F ++R T +E++ Sbjct: 418 TGAYYFAHHYAYNSLPRPGVYGFVPDGAGGVSFAVVRRAQTVEEIVA 464 >gi|148237898|ref|NP_001080167.1| ornithine decarboxylase 1 [Xenopus laevis] gi|27694591|gb|AAH44004.1| Odc1-prov protein [Xenopus laevis] Length = 460 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 90/417 (21%), Positives = 153/417 (36%), Gaps = 42/417 (10%) Query: 1 MSAFKYFEGSLHA--ENVSLEKLAHVV---------QTPFYCYSTTAIEKNYLTFSNAFD 49 M++F + E S + + FY I K ++ + A Sbjct: 1 MNSFSNDDFDFSFLEEGFSARDIVEQKINEVSLSDDKDAFYVADLGDIVKKHVRWFKALP 60 Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 YA+K N +A++KTL+ LG+G D S+ E++ + V ERI+++ K + Sbjct: 61 R--VTPFYAVKCNDGKAIVKTLSILGAGFDCASKTEIQLVQSIGVSPERIIYANPCKQVS 118 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 +I A G+ +SE EL + + + IA T + + Sbjct: 119 QIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIA----------TDDSKAVCRLSV 168 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 KFG + L A L V I GV H+GS +++ +A R + G Sbjct: 169 KFGATLKTSRLLLERAKEL-NVDIIGVSFHVGSGCTDPQTYVQAVSDARCVFDMGAELGF 227 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILV 287 N+ +D+GGG + + + + + + KII EPGR+ VA L Sbjct: 228 NMHLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVKIIAEPGRYYVASSFTLA 287 Query: 288 TKVISIKKSADK----------------TFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 +I+ K ++ + + D F A+ + P Sbjct: 288 VNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVNDGVYGSFNCILFDHAHVKPVLTKKPKP 347 Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 D + I GP C+ D I ++ + GD + E GAY + T+N Sbjct: 348 DEKFYSSSIWGPTCDGLDRIVERFELPELQVGDWMLFENMGAYTVAAASTFNGFQRP 404 >gi|312377939|gb|EFR24645.1| hypothetical protein AND_10627 [Anopheles darlingi] Length = 446 Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 79/423 (18%), Positives = 159/423 (37%), Gaps = 31/423 (7%) Query: 2 SAFKYFEGSLHAENVSLEKLAHV--VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 S L +V + + + + P + + + + + YA+ Sbjct: 8 SDLTLIGDELSIGDV-IRDIIRMGPHEEPLHVLDLDDVVLKHYGWCAKMPRVKP--FYAV 64 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K N + +++TL LG+G D S+GEL R L V + I+F+ K++ + A + Sbjct: 65 KCNDDPRILQTLHMLGAGFDCASKGELERILGLGVDPDNIIFAQPAKSVPSLLYARSKQV 124 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 + EL+ +++ I + KFG + Sbjct: 125 LTMTFDGAVELEKIHRHYPEAHLVLRIR----------HDSQKVRCSLGKKFGCEPVRDG 174 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + G+ + G+ H+GS ++ E ++ A ++ + L ++ G+ + +D+GGG Sbjct: 175 PELLRYAAELGMNVVGISFHVGSDCEEHEVYYDAVQVAKGLFDYAKTLGYKLTVLDIGGG 234 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVAD------VGILVTKVISI 293 + + + A++ + + +I+ EPGR+ VA V + Sbjct: 235 FPGDNNKPLDRFAVAVNAAIDRFFPADCNVRIMAEPGRYYVASAVTLVSFVESKRVVKEV 294 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYH---EINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ I+ +ND + T Y H IV + + GP C++ D Sbjct: 295 QEEDGTECTIMHYYLNDGVFGTFYTTAHEAQPAIPIVARKPGATEYRSMVWGPTCDSVDL 354 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM-VNGSQFHIIRPRMTFQE 409 I + K+ GD + E GAY +V S +N L + + + + Q+ Sbjct: 355 ILNDWKLPELELGDSVVFENCGAYTSVLSCRFNGFALPKVVAYLREGTWKL------LQD 408 Query: 410 LIE 412 +I Sbjct: 409 MIA 411 >gi|126324023|ref|XP_001362614.1| PREDICTED: similar to membrane protein palmitoylated 4 [Monodelphis domestica] Length = 461 Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 86/382 (22%), Positives = 140/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWYKALPR--VTPFYAVKCNDSRAILKTLAAVGAGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP RI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPGRIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLSIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + S + + + Sbjct: 207 TFVQAVSDARCVFDMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEISSVINPALDKYFPPD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEDEANDQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILFDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPTIYYV 408 >gi|74025726|ref|XP_829429.1| ornithine decarboxylase [Trypanosoma brucei TREU927] gi|70834815|gb|EAN80317.1| ornithine decarboxylase [Trypanosoma brucei] Length = 445 Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 84/396 (21%), Positives = 146/396 (36%), Gaps = 31/396 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PF+ I + + T+ YA+K N + V+ TLA LG+G D S E Sbjct: 57 GDPFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTE 114 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++R VP E+I+++ K I A SG+ + EL+ + + Sbjct: 115 IQRVRGIGVPPEKIIYANPCKQNSHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLR 174 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I +T ++ + KFG + + A L + ++GV H+GS Sbjct: 175 I----------STDDSLARCRLSVKFGAKVEDCRFILEQAKKL-NIDVTGVSFHVGSGST 223 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQY 263 +F +A R + G N+ +D+GGG + + + + + Sbjct: 224 DASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHF 283 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAM 308 +L+ I+ EPGR+ VA L VI+ K + + + D Sbjct: 284 PPDLKLTIVAEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVY 343 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 F A P + + + GP C+ D I + + G+ L Sbjct: 344 GSFNCILYDHAVVRPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLF 403 Query: 369 EKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIRP 403 E GAY V + ++N +V+G H++R Sbjct: 404 EDMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVRE 439 >gi|297617721|ref|YP_003702880.1| ornithine decarboxylase [Syntrophothermus lipocalidus DSM 12680] gi|297145558|gb|ADI02315.1| Ornithine decarboxylase [Syntrophothermus lipocalidus DSM 12680] Length = 369 Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 81/376 (21%), Positives = 143/376 (38%), Gaps = 16/376 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +KL TP S I + + ++ G + YA+KAN++ V+KT+ Sbjct: 10 KKLKEKWGTPLMVVSRREIGEKFAILNDYLPG--VKMYYAVKANAHPDVLKTVKEFTDRF 67 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 DI S E+ A + V +E ++ + K ++I A++ G+ F ++E EL+ Sbjct: 68 DICSPQEILAAKSIGVQSENMIHTNPVKKPEDIRFAVEQGVRWFVFDNEYELEKFKPYGS 127 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + ++F K+G+P + L A+ + + G+ Sbjct: 128 DVNLLLRLSF----------PNPDCVVNLSYKYGVPPDEATGLVIKAAEMGLA-VRGLCF 176 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 H+GSQ + A + + L +G + +D+GGG + Y P Sbjct: 177 HVGSQNLNPYKYTDAIAECKRVFNSLALHGIYLDFLDIGGGFPVEYIEPIMPLRRFFSPI 236 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 +I EPGRF++ D LV V+ K + + +D + LYD Sbjct: 237 QEALDSYFPNITVIAEPGRFIIGDAVNLVMTVVGKSKRNNVWWYYVDDGLYGSFSGRLYD 296 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + + I GP C++ D I N + GD L GAY A Sbjct: 297 HCDYLILSER---EGPREQCIIAGPTCDSFDVIYHNTVMPQLEIGDTLIALSMGAYTAAS 353 Query: 379 SGTYNSRLLIPEIMVN 394 + +N ++V+ Sbjct: 354 ASNFNGYPPARTVVVD 369 >gi|120586900|ref|YP_961245.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio vulgaris subsp. vulgaris DP4] gi|120564314|gb|ABM30057.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio vulgaris DP4] Length = 547 Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 163/441 (36%), Gaps = 40/441 (9%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSN 64 +G L S LA TP A+ D + Y+ K N Sbjct: 39 EDGVLTVGGASAVALAAAYGTPLLVVDEKALRAKVAEVRAVLDDELPGARLTYSYKTNCI 98 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +++ L G G + +S E A + VP E+++++GV K+ + + +A+ G N+ Sbjct: 99 PGILRVLHDAGVGAEAISAYEYWLAQSLGVPGEQLIYNGVDKSPESLAMAVAHGAL-INI 157 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E+ + A + G+ A I R+ + +A + + + + + + + Sbjct: 158 DNRDEVDAVLATARAQGRVARIGLRLGLNRSAQFGLDPDSAEGDGDIAHVVARCKAHPEH 217 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIA 243 AS + + ++ S + L D+ + R +G +I+ +DVGGG G+ Sbjct: 218 AS------LEALHFNVTSNARHSGYHVRCLALALDVMRTLARVHGVHIRLLDVGGGFGVQ 271 Query: 244 YHSDHRPPSSSDYASL----------------------------IHQYFGNLQCKIILEP 275 + Y + G Q + LEP Sbjct: 272 TSKNMSGVEYGLYRLFGVAPGGAWLDPFQDFRLYIRDMAALLTSYCRDNGLPQPVVCLEP 331 Query: 276 GRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH 335 GR L + +L+T+V ++K+ + D ++VN L Sbjct: 332 GRLLTSGAELLLTRVKAVKERPGAEPFAITDGGRLSQAYPC-DFEWHEAFLVNDLRRPLA 390 Query: 336 IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 + G +C D++ + + PGD+L + GAY + + + + + V Sbjct: 391 RAYTVTGRVCTRSDWLYRGKVMPELAPGDILAVLDAGAYFSSYAMNF-AFPRAAVVGVED 449 Query: 396 SQFHIIRPRMTFQELIELDSI 416 + ++R R TF+ L +D + Sbjct: 450 GRARVMRHRETFRHLTAMDEV 470 >gi|162174|gb|AAA30218.1| ornithine decarboxylase [Trypanosoma brucei] gi|4104937|gb|AAD02222.1| ornithine decarboxylase [Trypanosoma brucei gambiense] gi|261335419|emb|CBH18413.1| ornithine decarboxylase, putative [Trypanosoma brucei gambiense DAL972] Length = 445 Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 85/396 (21%), Positives = 147/396 (37%), Gaps = 31/396 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PF+ I + + T+ YA+K N + V+ TLA LG+G D S E Sbjct: 57 GDPFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTE 114 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++R VP E+I+++ K I I A SG+ + EL+ + + Sbjct: 115 IQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLR 174 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I +T ++ + KFG + + A L + ++GV H+GS Sbjct: 175 I----------STDDSLARCRLSVKFGAKVEDCRFILEQAKKL-NIDVTGVSFHVGSGST 223 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQY 263 +F +A R + G N+ +D+GGG + + + + + Sbjct: 224 DASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHF 283 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAM 308 +L+ I+ EPGR+ VA L VI+ K + + + D Sbjct: 284 PPDLKLTIVAEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVY 343 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 F A P + + + GP C+ D I + + G+ L Sbjct: 344 GSFNCILYDHAVVRPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLF 403 Query: 369 EKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIRP 403 E GAY V + ++N +V+G H++R Sbjct: 404 EDMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVRE 439 >gi|78048612|ref|YP_364787.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037042|emb|CAJ24777.1| bifunctional diaminopimelatedecarboxylase/aspartate kinase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 869 Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 110/387 (28%), Positives = 179/387 (46%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + +D YA+KAN++ A++ L Sbjct: 493 HAERAHLLSLSKA-GTPRYAYHLPTVRARAHALAQ-IAAVDQR-YYAIKANAHPAILMAL 549 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GELRR R++F+ E + A G+ E Sbjct: 550 EQAGFGLECVSHGELRRVFQTLPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVE-- 607 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + I R++ H+K++TG K KFG+ ++ A TL Sbjct: 608 ---ALRNWPEVFRGRTIWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLE 664 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y ++ Sbjct: 665 VT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSAEDE 719 Query: 250 PPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + ++ +EPGR+LVA+ G+L+ V + + V LD M Sbjct: 720 PFDLEVWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGM 779 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP-RPGDLLY 367 N +RP LYDA+H+I + + DIVGPICE+ D R++ PGD++ Sbjct: 780 NTLIRPALYDAWHDIENLSQLDAPAGGM-FDIVGPICESSDVFGKRRRLPAATAPGDVVL 838 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + GAYG + TYN R L E +++ Sbjct: 839 VADAGAYGYTMASTYNQRELPREEVID 865 >gi|219122853|ref|XP_002181752.1| diaminopimelate decarboxylase [Phaeodactylum tricornutum CCAP 1055/1] gi|217407028|gb|EEC46966.1| diaminopimelate decarboxylase [Phaeodactylum tricornutum CCAP 1055/1] Length = 481 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 93/417 (22%), Positives = 154/417 (36%), Gaps = 31/417 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y YS +E+ + V YA+KA N +++K +D S E Sbjct: 63 GTPLYAYSIDKLEEAADACLAFPNAYGLTVRYAMKACPNASILKYFHSKNIHVDASSGFE 122 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +RRA+ A VPAE I S D L S+ E GK A Sbjct: 123 VRRAMDAGVPAENISLSTQELPEDFAALVDMGVKLNACSVSQLERF----GEHYAGKGAK 178 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + RVNP + + +TG + G P + + I +I Sbjct: 179 VGVRVNPGVGSGGFSASTTGFSKTNVGGPSSSFGIWHELVTDGTVPDIVERYGLEVERIH 238 Query: 206 QIESFHKAFKLLRDLTQQ---LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ + + + ++ +++GGG + + + Sbjct: 239 THIGSGSDPEIWQQVATKSLSFCKVFPTVKTMNLGGGYKVGRNKGEVTTDLQKIGKPVAD 298 Query: 263 YFGNLQC------KIILEPGRFLVADVGILVTKVISIKKSADKTFVIL---DVAMNDFMR 313 F ++ +EPG +LVA G LV+KV + + D M D +R Sbjct: 299 AFKKFAEKEGRELQMEIEPGTYLVAMAGALVSKVQDKVHTTGENSHTFLKLDAGMTDVLR 358 Query: 314 PTLYDAYHEINYIVNPAGDR----LHIHADIVGPICETGDFIA---------LNRKIALP 360 P+LY A H I + +VG CE+GD + +++ Sbjct: 359 PSLYGAVHPITILPGSGNSADVGDETESVVVVGHCCESGDLMTPAPGEPEQLAEQELRAA 418 Query: 361 RPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNG-SQFHIIRPRMTFQELIELDS 415 GD+L ++ +GAY + S YNS PE++V+ + H+IR R T ++ E + Sbjct: 419 AVGDILVMDGSGAYCSGMSTKNYNSFPEAPEVLVDKAGKAHLIRKRQTLSQIYENEI 475 >gi|162455320|ref|YP_001617687.1| hypothetical protein sce7038 [Sorangium cellulosum 'So ce 56'] gi|161165902|emb|CAN97207.1| lysA [Sorangium cellulosum 'So ce 56'] Length = 427 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 88/388 (22%), Positives = 157/388 (40%), Gaps = 9/388 (2%) Query: 33 STTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAA 92 + AF + A+KAN V++ G+GL+ S E++ +LAA Sbjct: 34 DLGRMRARIGRIGAAFP-PGALHTVAIKANPLVEVLRAAVDCGAGLEAASLEEVKLSLAA 92 Query: 93 PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 P +RIV+ K+ +I AL+ G+ + EL +++ G + I R+NP Sbjct: 93 GCPPDRIVYDSPAKSRADIAEALRLGVRINADNLD-ELGRIDELVGHGGAASRIGLRINP 151 Query: 153 DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK 212 + A++ S + KFG+P+ Q ++ A + + V + Sbjct: 152 QVGASSIALTSVADRRSKFGVPLEQADAVRAAFARYAWLAGLHVHVGSQGCALSQLIDGI 211 Query: 213 AFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ---C 269 + +D+GGGL +AY S RPP+ DYA+ + + L Sbjct: 212 GRVEALRQELRRAMGPLAAGTMDIGGGLPVAYRSTDRPPALEDYAAALRREVPTLFEEGT 271 Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNP 329 +I E GR++ A G V++V +KK + IL + + +R + +++ Sbjct: 272 TLITEFGRWIQAGCGFAVSRVEYVKKDSAGRTAILHLGADFLLRRAYHPDDWHHDFMALD 331 Query: 330 AGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + GP+C GD +A PGDL+ I TGAY + SR Sbjct: 332 PEAEPKGGPLSPCTLGGPLCFGGDVLARELAFPELSPGDLVLIRDTGAYTLSMWSRHCSR 391 Query: 386 LLIPEIMVNGSQFHIIRPRMTFQELIEL 413 + + V+ ++R R ++++ Sbjct: 392 GIPAVLGVDADDLRVLRERELPEDVVAF 419 >gi|149964|gb|AAA25361.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis str. Erdman] Length = 446 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 105/443 (23%), Positives = 181/443 (40%), Gaps = 55/443 (12%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + + L +LA TP + + AF G V YA KA V Sbjct: 22 GVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVA 80 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + ++ G LD+ + GEL AL A P ERI G K++ E+ A+++G+ V+S + Sbjct: 81 RWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMT 140 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYAS 186 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ + ++ Sbjct: 141 EIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVF 200 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI ++ F A + + + I +D+GGGLG Sbjct: 201 ATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLG 260 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y PP ++ A S G K+++EPGR + I + +V Sbjct: 261 ISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVK 320 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D M+D +R LY A +++ + D + A +VG CE+GD Sbjct: 321 DVDVSATAHRRYVSVDGGMSDNIRTGLYGAQYDVRLVSR-VSDAPPVPARLVGKHCESGD 379 Query: 350 FIALNRKIAL---PRPGDL----------LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS 396 I + + P +E GS Sbjct: 380 IIVRDTWVPTIFGPAI--WLRLPPPALLLFAVES------------LQHGRPSR---CGS 422 Query: 397 QFH----IIRPRMTFQELIELDS 415 ++ R T +L+ L+ Sbjct: 423 GARGNARLVLRRETVDDLLSLEV 445 >gi|66474038|gb|AAY46598.1| BCG hsp60-lysA chimera [Shuttle vector pCB112-Edim6] gi|66474042|gb|AAY46601.1| hsp60-lysA chimera [Shuttle vector pCB119-Edim6] gi|77632628|gb|ABB00292.1| BCG hsp60-lysA chimaera [Shuttle vector pCB112-HPV11-L1] Length = 455 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 105/443 (23%), Positives = 181/443 (40%), Gaps = 55/443 (12%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G + + L +LA TP + + AF G V YA KA V Sbjct: 31 GVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVA 89 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + ++ G LD+ + GEL AL A P ERI G K++ E+ A+++G+ V+S + Sbjct: 90 RWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMT 149 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YAYAS 186 E++ L+ A G + R+ + A+TH+ IST ++ KFG+ + ++ Sbjct: 150 EIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVF 209 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRSNGHNIQHIDVGGGLG 241 +++ G+ HIGSQI ++ F A + + + I +D+GGGLG Sbjct: 210 ATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLG 269 Query: 242 IAYHSDHRPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 I+Y PP ++ A S G K+++EPGR + I + +V Sbjct: 270 ISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVK 329 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + +A + +V +D M+D +R LY A +++ + D + A +VG CE+GD Sbjct: 330 DVDVSATAHRRYVSVDGGMSDNIRTGLYGAQYDVRLVSR-VSDAPPVPARLVGKHCESGD 388 Query: 350 FIALNRKIAL---PRPGDL----------LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS 396 I + + P +E GS Sbjct: 389 IIVRDTWVPTIFGPAI--WLRLPPPALLLFAVES------------LQHGRPSR---CGS 431 Query: 397 QFH----IIRPRMTFQELIELDS 415 ++ R T +L+ L+ Sbjct: 432 GARGNARLVLRRETVDDLLSLEV 454 >gi|308070504|ref|YP_003872109.1| diaminopimelate decarboxylase [Paenibacillus polymyxa E681] gi|305859783|gb|ADM71571.1| Diaminopimelate decarboxylase [Paenibacillus polymyxa E681] Length = 470 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 111/461 (24%), Positives = 176/461 (38%), Gaps = 64/461 (13%) Query: 19 EKLAHVVQ---TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 E L TPFY Y A+ + + + V YALKAN N A+ L LG Sbjct: 6 EALLERFGEHLTPFYYYDGDALHAHVSSLLSRL-HPAVRVHYALKANGNVALAGLLRSLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G++I S GE+ A+ A AE ++++G GKT+ E++ A+ GI C +VES EL+ L Sbjct: 65 CGVEIASAGEMFVAMEAGYAAEDVLYAGPGKTVAELNEAVACGIGCIHVESVRELRLLED 124 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A G+ A R+NPD + + G FG+ Q+ + P V G Sbjct: 125 IAAQAGQFVRAAVRINPDNDLSGATIKMGGVP-RPFGVDEGQLDHFFKVLEDCPHVHFQG 183 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V ++ G+Q+ + + +F L +++++ H GG + H P D Sbjct: 184 VQVYTGTQMLKSDQILASFANTLQLAERVQAQYGVAMHTVNLGGGFGVPYFAHEQPLDMD 243 Query: 256 Y------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + A K+I+E GR+LVA G+ V + + K+S + FV+ D MN Sbjct: 244 HVIDGLNALAEQTRTRLPGVKLIIESGRYLVAQSGMYVCRALYTKESKGEKFVVADGGMN 303 Query: 310 DF----MRPTLYDAYHEINYIVNPAGDRLH------------------------------ 335 + R + + + AG+ Sbjct: 304 HYAAATFRGRRIRDNYPVRIMRKQAGESKEPKEREVEATLWMGQRDASAQTAVAVEQSLE 363 Query: 336 -----------------IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 IVGP+C D I ++ GD + GAYG Sbjct: 364 EVANRIGGPLEEASMELETVSIVGPLCTPEDCIVKKAQLPPIHEGDYIAFPNAGAYGLSY 423 Query: 379 SG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS-IP 417 S + E++ + H+IR +L+ IP Sbjct: 424 SPLQFLGHATPAELLDFRGEVHVIREHGDRTDLLHHQRMIP 464 >gi|330863543|emb|CBX73659.1| diaminopimelate decarboxylase [Yersinia enterocolitica W22703] Length = 309 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 91/293 (31%), Positives = 133/293 (45%), Gaps = 21/293 (7%) Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 P+ RVNP +K +TG + K GI + A K+ G+ MH Sbjct: 22 HASGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIAKIQQYGL-KLVGIHMH 80 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 IGS + + ++ + QQ+ + G +I I GGGL I Y + Y L Sbjct: 81 IGSGV----DYQHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHYYGL 136 Query: 260 IHQY------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + +EPGRFLVA+ G+L+ +V ++K + +V++D ND MR Sbjct: 137 WNSARERIAAHLGHPVSLEIEPGRFLVAEAGVLIAQVRAVKNMGRRHYVLVDAGFNDLMR 196 Query: 314 PTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPG 363 P +Y +YH I + I + GP+CE+GD RK+ G Sbjct: 197 PAMYGSYHHISVLPADGRSLANEPLIDTVVAGPLCESGDVFTQEAGGGLETRKLPAANIG 256 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 D L TGAYGA S YNSR L+PE++ Q +IR R T +ELI L+ I Sbjct: 257 DYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIALELI 309 >gi|110748906|ref|XP_393529.3| PREDICTED: ornithine decarboxylase-like [Apis mellifera] Length = 470 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 86/400 (21%), Positives = 146/400 (36%), Gaps = 27/400 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 ++++L L FY + + + + + YA+K N N VI+ LA Sbjct: 23 IKDIALSGLQEEA---FYVLDIGDVVRKHQIWKEKMPRVSP--YYAVKCNDNLIVIEVLA 77 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 LG G D S+ E+ + L+ V RI+F+ K I + G+ ++ESEL Sbjct: 78 ALGIGFDCASKSEINKVLSVGVDPSRIIFANPAKPASHIRHSAVVGVDVMTADNESELHK 137 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + + + I + KFG S + G+ Sbjct: 138 IKKLHPTAKVVIRIRCDAEVA----------QCQLGMKFGCDPIFEAPNLLRLSRVLGLN 187 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 I G+ H+GS F++A + + L G +D+GGG S + Sbjct: 188 IIGISFHVGSGCQDPPVFYRAIRHSKILFDLATDLGFKPYLLDIGGGYPGNKGSSIDRIA 247 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---------KTFVI 303 + +YF +I EPGRF VA L T + S + Sbjct: 248 D-VVNEALDEYFNTDAVHVIAEPGRFYVASAFTLATSIHSKRSVRGDENSPNTITHNMYY 306 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 ++ + LYD H I + G I + I GP C+ D + N + G Sbjct: 307 INDGVYGSFNCLLYDHQHVIPIPLK-KGCGKMIPSSIWGPTCDGLDQVVENVLLHEMDLG 365 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIR 402 D + E GAY + +N + I+ + + +H+++ Sbjct: 366 DWIIFENMGAYTLPVASPFNGFPVPKVHIVADENIWHLLK 405 >gi|256823045|ref|YP_003147008.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Kangiella koreensis DSM 16069] gi|256796584|gb|ACV27240.1| aspartate kinase [Kangiella koreensis DSM 16069] Length = 853 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 166/366 (45%), Gaps = 16/366 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y+ A+ +N + +D + +A+KAN++ V+ T G G + VS E+ R Sbjct: 498 AYIYNLAAVAENIKNLQS-ISAVD-QIFFAVKANNHPQVLTTAYEQGIGFETVSIFEVER 555 Query: 89 ALAAPV--PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 RI F+ + +E AL G+ S + I Sbjct: 556 IKELFPAIDTNRIFFTPNFASHNEYQKALDYGVMLSLDSS-----YPLKYWAKTFANKTI 610 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R++P++ H+ + T KFGIPI ++ L +K+ G+ H GS I Sbjct: 611 FLRIDPNVGKGHHENVRTAGATSKFGIPIQELEELLPIIKEH-NIKVLGLHAHAGSGILT 669 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI-HQYFG 265 E + + +LL + +Q +++++++GGG GI + + + Sbjct: 670 NEHWAEHARLLASVAKQF----PDVKYLNLGGGFGIKERAQQTELTMEQINQSLLEVKAQ 725 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ +EPGR++VA+ G+LV+KV +K+ + +V ++ MN MRP LY +YH I Sbjct: 726 YPDHQLWIEPGRYIVANTGVLVSKVTQVKQKQNYYYVGINTGMNSLMRPALYGSYHNIVN 785 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + + A +VGPICE+ D + + GDL+ IE GAYG V S YN R Sbjct: 786 LSRMT-ESKNHLATVVGPICESTDKLGIEIPFPDTFEGDLILIENAGAYGHVMSTHYNMR 844 Query: 386 LLIPEI 391 E+ Sbjct: 845 APAEEV 850 >gi|152149219|pdb|2OO0|A Chain A, A Structural Insight Into The Inhibition Of Human And Leishmania Donovani Ornithine Decarboxylases By 3-Aminooxy- 1-Aminopropane gi|152149220|pdb|2OO0|B Chain B, A Structural Insight Into The Inhibition Of Human And Leishmania Donovani Ornithine Decarboxylases By 3-Aminooxy- 1-Aminopropane Length = 471 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 140/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA G+G D S+ E++ Sbjct: 50 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQL 107 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 108 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 166 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 167 ---------TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPE 216 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 217 TFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSD 276 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 277 SGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 336 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 337 NCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 396 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 397 GAYTVAAASTFNGFQRPTIYYV 418 >gi|60810097|gb|AAX36104.1| ornithine decarboxylase 1 [synthetic construct] Length = 462 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 140/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPTIYYV 408 >gi|4505489|ref|NP_002530.1| ornithine decarboxylase [Homo sapiens] gi|118377|sp|P11926|DCOR_HUMAN RecName: Full=Ornithine decarboxylase; Short=ODC gi|152149217|pdb|2ON3|A Chain A, A Structural Insight Into The Inhibition Of Human And Leishmania Donovani Ornithine Decarboxylases By 3-Aminooxy- 1-Aminopropane gi|152149218|pdb|2ON3|B Chain B, A Structural Insight Into The Inhibition Of Human And Leishmania Donovani Ornithine Decarboxylases By 3-Aminooxy- 1-Aminopropane gi|35136|emb|CAA39047.1| ornithine decarboxylase [Homo sapiens] gi|189371|gb|AAA59967.1| ornithine decarboxylase [Homo sapiens] gi|296667|emb|CAA34353.1| ornithine decarboxylase (ODC) [Homo sapiens] gi|338278|gb|AAA60563.1| ornithine decarboxylase [Homo sapiens] gi|338280|gb|AAA60564.1| ornithine decarboxylase [Homo sapiens] gi|386989|gb|AAA59969.1| ornithine decarboxylase [Homo sapiens] gi|19263696|gb|AAH25296.1| Ornithine decarboxylase 1 [Homo sapiens] gi|29893806|gb|AAA59966.2| ornithine decarboxylase [Homo sapiens] gi|56410853|gb|AAV88093.1| ornithine decarboxylase 1 [Homo sapiens] gi|62822486|gb|AAY15034.1| unknown [Homo sapiens] gi|119621363|gb|EAX00958.1| ornithine decarboxylase 1, isoform CRA_a [Homo sapiens] gi|119621364|gb|EAX00959.1| ornithine decarboxylase 1, isoform CRA_a [Homo sapiens] gi|123998958|gb|ABM87068.1| ornithine decarboxylase 1 [synthetic construct] gi|157929112|gb|ABW03841.1| ornithine decarboxylase 1 [synthetic construct] gi|158258136|dbj|BAF85041.1| unnamed protein product [Homo sapiens] gi|189053466|dbj|BAG35632.1| unnamed protein product [Homo sapiens] gi|190690881|gb|ACE87215.1| ornithine decarboxylase 1 protein [synthetic construct] Length = 461 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 140/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPTIYYV 408 >gi|6573538|pdb|1QU4|A Chain A, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase gi|6573539|pdb|1QU4|B Chain B, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase gi|6573540|pdb|1QU4|C Chain C, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase gi|6573541|pdb|1QU4|D Chain D, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase gi|11513499|pdb|1F3T|A Chain A, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase (Odc) Complexed With Putrescine, Odc's Reaction Product. gi|11513500|pdb|1F3T|B Chain B, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase (Odc) Complexed With Putrescine, Odc's Reaction Product. gi|11513501|pdb|1F3T|C Chain C, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase (Odc) Complexed With Putrescine, Odc's Reaction Product. gi|11513502|pdb|1F3T|D Chain D, Crystal Structure Of Trypanosoma Brucei Ornithine Decarboxylase (Odc) Complexed With Putrescine, Odc's Reaction Product Length = 425 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 85/396 (21%), Positives = 147/396 (37%), Gaps = 31/396 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PF+ I + + T+ YA+K N + V+ TLA LG+G D S E Sbjct: 37 GDPFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTE 94 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++R VP E+I+++ K I I A SG+ + EL+ + + Sbjct: 95 IQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLR 154 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I +T ++ + KFG + + A L + ++GV H+GS Sbjct: 155 I----------STDDSLARCRLSVKFGAKVEDCRFILEQAKKL-NIDVTGVSFHVGSGST 203 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQY 263 +F +A R + G N+ +D+GGG + + + + + Sbjct: 204 DASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHF 263 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAM 308 +L+ I+ EPGR+ VA L VI+ K + + + D Sbjct: 264 PPDLKLTIVAEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVY 323 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 F A P + + + GP C+ D I + + G+ L Sbjct: 324 GSFNCILYDHAVVRPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLF 383 Query: 369 EKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIRP 403 E GAY V + ++N +V+G H++R Sbjct: 384 EDMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVRE 419 >gi|34810213|pdb|1NJJ|A Chain A, Crystal Structure Determination Of T. Brucei Ornithine Decarboxylase Bound To D-Ornithine And To G418 gi|34810214|pdb|1NJJ|B Chain B, Crystal Structure Determination Of T. Brucei Ornithine Decarboxylase Bound To D-Ornithine And To G418 gi|34810215|pdb|1NJJ|C Chain C, Crystal Structure Determination Of T. Brucei Ornithine Decarboxylase Bound To D-Ornithine And To G418 gi|34810216|pdb|1NJJ|D Chain D, Crystal Structure Determination Of T. Brucei Ornithine Decarboxylase Bound To D-Ornithine And To G418 Length = 425 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 85/396 (21%), Positives = 147/396 (37%), Gaps = 31/396 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PF+ I + + T+ YA+K N + V+ TLA LG+G D S E Sbjct: 37 GDPFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTE 94 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++R VP E+I+++ K I I A SG+ + EL+ + + Sbjct: 95 IQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLR 154 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I +T ++ + KFG + + A L + ++GV H+GS Sbjct: 155 I----------STDDSLARCRLSVKFGAKVEDCRFILEQAKKL-NIDVTGVSFHVGSGST 203 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQY 263 +F +A R + G N+ +D+GGG + + + + + Sbjct: 204 DASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHF 263 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAM 308 +L+ I+ EPGR+ VA L VI+ K + + + D Sbjct: 264 PPDLKLTIVAEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVY 323 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 F A P + + + GP C+ D I + + G+ L Sbjct: 324 GSFNCILYDHAVVRPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLF 383 Query: 369 EKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIRP 403 E GAY V + ++N +V+G H++R Sbjct: 384 EDMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVRE 419 >gi|312377938|gb|EFR24644.1| hypothetical protein AND_10625 [Anopheles darlingi] Length = 401 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 82/368 (22%), Positives = 135/368 (36%), Gaps = 20/368 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY I + + + + YA+K N N+ V TLA LG+ D S+GE+ Sbjct: 36 PFYVMDIGDIVRKHRQWIEKMPR--VVPHYAVKCNDNEVVCGTLAALGASFDCASKGEIA 93 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + L V ERI+F+ K + A +G+ +S++EL + Q I Sbjct: 94 KILGLGVAPERIIFANPMKPASHLRYASSNGVKTMTYDSDTELHKIKQYCPDAKLVIRIR 153 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 KFG + + G+ + GV H+GS Sbjct: 154 CEAEKA----------QCPLGKKFGCDPVEEAPRLIKIARSLGLDVIGVSFHVGSGCADF 203 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++KA DL + G+ +D+GGG + S+ A+L + Sbjct: 204 PIYYKAISYAHDLFEYAAQLGYTFNLLDIGGGFPGDTGTSIDEVSTIVNAALEQFFPDKA 263 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKS-------ADKTFVILDVAMNDFMRPTLYDAY 320 ++I EPGR+ V+ LVT V S + D+ L+ + LYD Sbjct: 264 AVRVISEPGRYYVSSAFTLVTNVQSKRICLNARTGAIDRMMYYLNDGVYASFNCILYDHQ 323 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 ++ ++ I GP C+ D + + + D + E GAY + Sbjct: 324 IPRPKLIG-GQTGKQYNSTIWGPTCDALDQLIETIALPELQIDDWVVFENMGAYTIPVAS 382 Query: 381 TYNSRLLI 388 +N L Sbjct: 383 PFNGFELP 390 >gi|31982947|ref|NP_776555.1| ornithine decarboxylase [Bos taurus] gi|118373|sp|P27117|DCOR_BOVIN RecName: Full=Ornithine decarboxylase; Short=ODC gi|163449|gb|AAA92339.1| ornithine decarboxylase [Bos taurus] gi|1036793|gb|AAA79849.1| ornithine decarboxylase [Bos taurus] gi|148877459|gb|AAI46219.1| Ornithine decarboxylase 1 [Bos taurus] gi|296482246|gb|DAA24361.1| ornithine decarboxylase [Bos taurus] Length = 461 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 89/413 (21%), Positives = 151/413 (36%), Gaps = 38/413 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++ ++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKELDI-DVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 +II EPGR+ VA L +I+ K + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEEESTDRTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMTFQELIELDSIPAWLQKT 423 GAY + T+N V + +++ I P +++ Sbjct: 387 GAYTVAAASTFNGFQRPTIYYVMSGPTWQLMQQ-------IRTQDFPPGVEEP 432 >gi|182412516|ref|YP_001817582.1| Orn/DAP/Arg decarboxylase 2 [Opitutus terrae PB90-1] gi|177839730|gb|ACB73982.1| Orn/DAP/Arg decarboxylase 2 [Opitutus terrae PB90-1] Length = 379 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 83/386 (21%), Positives = 133/386 (34%), Gaps = 21/386 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L+KLA TP + A+ K Y TF + V YA+KAN + A+++TL G+ Sbjct: 6 RLQKLAKEHGTPLFIVDHDALRKAYRTFRKHLPRI--QVYYAVKANPDPAIVRTLFQEGA 63 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S E + K E E + Sbjct: 64 SFDVASMPEFMIVHE-------NIKRLPAKERQEWIWDKIIYANPTKPTETLEELNQYKP 116 Query: 137 AVSLGKKAPIAFRVNPDINANT------HKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 V+ I NA + + KFG + L A Sbjct: 117 LVTFDNLEEIQKIKQHAPNAGLVLRLKVPNTGAMVELSSKFGASPGEAVDLILEADKAGL 176 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + G+ H+GSQ E++ +A L ++ Q+ R G+ ++ GG A + D Sbjct: 177 G-VEGISFHVGSQTTNFENYVQALNLSANIFQEARERGYTKMNLLDIGGGFPAPYDDTVK 235 Query: 251 PSSS--DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P + + +I+ EPGRFL A G V KVI KT ++ + Sbjct: 236 PFEMLAKVINTELDRLFPKEIQILAEPGRFLAAVSGTSVAKVIGKAVRDGKTCYYINDGV 295 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 ++D Y V + GP C+ D +++ + + GD +Y Sbjct: 296 YHTYSGVIFD---HCKYPVKAFKKGPTSLCSVFGPTCDALDVVSMAENLPDLQRGDFVYS 352 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMVN 394 GAY + +N + VN Sbjct: 353 VNIGAYSHASATYFNGFPPAKVVHVN 378 >gi|297282813|ref|XP_001093632.2| PREDICTED: ornithine decarboxylase 2-like [Macaca mulatta] Length = 446 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 84/373 (22%), Positives = 133/373 (35%), Gaps = 23/373 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF + + F A + YA+K NS+ V++ LA LG+G D S+ EL Sbjct: 63 PFMLADLDMLASRHQAFCQALPQVSP--FYAVKCNSSPWVLRVLAALGTGFDCASQVELE 120 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + L V RI+++ K I A + G+ +SE EL + Q + Sbjct: 121 QVLGLGVAPSRIIYANPCKPASHIRYAARHGVQLLTFDSEEELTKVAQHHPGARLLLRLR 180 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T ST KFG + L A + + G H+GS Sbjct: 181 ----------TQDSQSTFPLSTKFGASLEACGHLLTSARDMGLA-VVGASFHVGSNCQTP 229 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY--ASLIHQYFG 265 +SF +A R + + R GH++ +D+GGG S + + A+L + Sbjct: 230 QSFTQAIADCRCVFEMGRGAGHDMSCLDIGGGFPGTEDSGPKFEEMARVISAALAQDFPE 289 Query: 266 NLQCKIILEPGRFLVADVGILVTK------VISIKKSADKTFVILDVAMNDFMRPTLYDA 319 K+I EPGRF + V V+ S + + D F Sbjct: 290 ERGVKVIAEPGRFYMESVCTAAVNIIAKKAVLEPGGSRKLMYYLNDGHYGSFRLGHREPV 349 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGD-FIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + + + GP C+ D + ++ GD L GAY + Sbjct: 350 PRVPIVVKEFCSEPPLFPCTLYGPTCDASDRLFLEDVRLPELDVGDWLVFPSMGAYTSSM 409 Query: 379 SGTYNSRLLIPEI 391 S ++N L I Sbjct: 410 SCSFNGF-LPATI 421 >gi|114576085|ref|XP_001156939.1| PREDICTED: ornithine decarboxylase 1 isoform 3 [Pan troglodytes] Length = 476 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 82/387 (21%), Positives = 139/387 (35%), Gaps = 25/387 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA-----VSLGKK 143 + V ERI+++ K + +I A +G+ +SE EL + + Sbjct: 98 VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKIYQRQYI 157 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + T + + KFG + L A L + + GV H+GS Sbjct: 158 CCTFLACRLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSG 216 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IH 261 E+F +A R + G ++ +D+GGG + + + + Sbjct: 217 CTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDK 276 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDV 306 + + +II EPGR+ VA L + + + D Sbjct: 277 YFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDG 336 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 F A+ + P D + + I GP C+ D I + GD + Sbjct: 337 VYGSFNCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWM 396 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEIMV 393 E GAY + T+N V Sbjct: 397 LFENMGAYTVAAASTFNGFQRPTIYYV 423 >gi|332247288|ref|XP_003272785.1| PREDICTED: ornithine decarboxylase isoform 1 [Nomascus leucogenys] gi|332247290|ref|XP_003272786.1| PREDICTED: ornithine decarboxylase isoform 2 [Nomascus leucogenys] Length = 461 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 141/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPTIYYV 408 >gi|158300908|ref|XP_320710.4| AGAP011805-PA [Anopheles gambiae str. PEST] gi|157013386|gb|EAA00421.4| AGAP011805-PA [Anopheles gambiae str. PEST] Length = 400 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 82/399 (20%), Positives = 146/399 (36%), Gaps = 24/399 (6%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQT--PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 + +G + + +++LA + T PFY I + + + + YA+ Sbjct: 9 DKIEIVDGEVEVPAI-IDQLAEQLPTDNPFYVMDIGDIVRKHQQWIEKMPR--VVPHYAV 65 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K N V TLA LG+ D S+GE+ + L+ V ERI+F+ K + A + + Sbjct: 66 KCNDTDLVCATLAALGASFDCASKGEIAKILSLGVAPERIIFANPMKPASHVRYAASNAV 125 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 +S++EL + Q I KFG + Sbjct: 126 KTMTYDSDTELHKIKQYCPDAKLVIRIRCEAEKA----------QCPLGKKFGCDPVEEA 175 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + G+++ GV H+GS ++KA RDL G++ +D+GGG Sbjct: 176 PRLIKIARSLGLEVIGVSFHVGSGCADFPIYYKAISYARDLFDYAAQLGYSFSLLDIGGG 235 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS--- 296 + + + + +F + ++I EPGR+ V+ LVT V S + Sbjct: 236 FPGDTGTSIDEVAMI-VNAALDTFFPDKAVRVISEPGRYYVSSAFTLVTNVQSKRVCLNA 294 Query: 297 ----ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 D+ L+ + LYD ++ + + GP C+ D + Sbjct: 295 RTGTIDRMMYYLNDGVYASFNSILYDHQVPQPKLIGGQA-GKQYKSTLWGPTCDALDQLI 353 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 + + D + E GAY + +N L Sbjct: 354 ETIALPELQIDDWVVFENMGAYTIPVASPFNGFELPKVY 392 >gi|56553801|pdb|1SZR|C Chain C, A Dimer Interface Mutant Of Ornithine Decarboxylase Reveals Structure Of Gem Diamine Intermediate gi|56553802|pdb|1SZR|D Chain D, A Dimer Interface Mutant Of Ornithine Decarboxylase Reveals Structure Of Gem Diamine Intermediate gi|56553803|pdb|1SZR|A Chain A, A Dimer Interface Mutant Of Ornithine Decarboxylase Reveals Structure Of Gem Diamine Intermediate gi|56553804|pdb|1SZR|B Chain B, A Dimer Interface Mutant Of Ornithine Decarboxylase Reveals Structure Of Gem Diamine Intermediate Length = 425 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 84/396 (21%), Positives = 146/396 (36%), Gaps = 31/396 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PF+ I + + T+ YA+K N + V+ TLA LG+G D S E Sbjct: 37 GDPFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTE 94 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++R VP E+I+++ K I I A SG+ + EL+ + + Sbjct: 95 IQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLR 154 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I +T ++ + KFG + + A L + ++GV H+GS Sbjct: 155 I----------STDDSLARCRLSVKFGAKVEDCRFILEQAKKL-NIDVTGVSFHVGSGST 203 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQY 263 +F +A R + G N+ +D+GGG + + + + + Sbjct: 204 DASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHF 263 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAM 308 +L+ I+ EPGR+ VA L VI+ + + + D Sbjct: 264 PPDLKLTIVAEPGRYYVASAFTLAVNVIAKAVTPGVQTDVGAHAESNAQSFMYYVNDGVY 323 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 F A P + + + GP C+ D I + + G+ L Sbjct: 324 GSFNCILYDHAVVRPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLF 383 Query: 369 EKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIRP 403 E GAY V + ++N +V+G H++R Sbjct: 384 EDMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVRE 419 >gi|7404357|sp|P07805|DCOR_TRYBB RecName: Full=Ornithine decarboxylase; Short=ODC gi|162175|gb|AAA30219.1| ornithine decarboxylase [Trypanosoma brucei] Length = 423 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 85/396 (21%), Positives = 147/396 (37%), Gaps = 31/396 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PF+ I + + T+ YA+K N + V+ TLA LG+G D S E Sbjct: 35 GDPFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTE 92 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++R VP E+I+++ K I I A SG+ + EL+ + + Sbjct: 93 IQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLR 152 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I +T ++ + KFG + + A L + ++GV H+GS Sbjct: 153 I----------STDDSLARCRLSVKFGAKVEDCRFILEQAKKL-NIDVTGVSFHVGSGST 201 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQY 263 +F +A R + G N+ +D+GGG + + + + + Sbjct: 202 DASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHF 261 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAM 308 +L+ I+ EPGR+ VA L VI+ K + + + D Sbjct: 262 PPDLKLTIVAEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVY 321 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 F A P + + + GP C+ D I + + G+ L Sbjct: 322 GSFNCILYDHAVVRPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLF 381 Query: 369 EKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIRP 403 E GAY V + ++N +V+G H++R Sbjct: 382 EDMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVRE 417 >gi|296161875|ref|ZP_06844676.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia sp. Ch1-1] gi|295887894|gb|EFG67711.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Burkholderia sp. Ch1-1] Length = 402 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 98/395 (24%), Positives = 159/395 (40%), Gaps = 16/395 (4%) Query: 11 LHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 L V + +LA TPF+ Y AI+ + + Y++KAN AVI Sbjct: 12 LQFGGVDVRQLADRAGRTPFFAYDRMAIDIRVRELRSLLP-SGMHLHYSIKANPMPAVIH 70 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 LA GLD+ S E+ AL A + I F+G GK+ +++ A+ SGI + Sbjct: 71 YLAQRVDGLDVASAQEMALALDAGTAPDAIGFAGPGKSHEDLRRAVASGINVHVESET-Q 129 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L+ + LG + +A RVNPD + + G FG+ + Q+ +L Sbjct: 130 LRLVTALGWELGVQPRVAIRVNPDFQVG-NSGMRMGGGAAPFGMDVDQVPALLRELEARE 188 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 ++G + GSQ + +A + DL +L S GG + Sbjct: 189 VA-LAGFHVFWGSQCLHAATIIEAQRQSADLILRLASGLAQPLRFVNLGGGFGIPYFPGE 247 Query: 250 PPSSSDYASLIHQYFGNLQCK------IILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 P + + C+ ILE GR+LV + GI V +V+ K S +TFVI Sbjct: 248 TPLDVKAVCEAMRDWLPPLCERLPGTTPILELGRYLVGEAGIYVCRVVDRKVSRGRTFVI 307 Query: 304 LDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 D ++ + I N +VG +C D +A + ++ Sbjct: 308 TDGGLHHQLAASGNFGQVLRRNFPVVIGNRPDGVPRERCHVVGCLCTPLDRLADDVELPE 367 Query: 360 PRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 GD + ++++GAYG S + S E++V Sbjct: 368 AHIGDFVVVKQSGAYGRSASPVHFLSHPEPVEMLV 402 >gi|326333860|ref|ZP_08200093.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nocardioidaceae bacterium Broad-1] gi|325948442|gb|EGD40549.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Nocardioidaceae bacterium Broad-1] Length = 397 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 101/402 (25%), Positives = 162/402 (40%), Gaps = 17/402 (4%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 Y G V + LA V TPF+ Y AI+ + +A D + YA+KAN Sbjct: 1 MTYV-GRPAVGGVPVRLLAERVGSTPFFAYDRAAIDARVASLRSALPE-DVHLSYAVKAN 58 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 AV++ LA LD+ S E+R AL + + F+G GK++ E+ A+ +G+ Sbjct: 59 PMPAVVQHLARTVDALDVASGAEMRVALDTGIAPGSVSFAGPGKSVAELTQAVAAGVL-V 117 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 +ES E L + A LG + +A RVNPD G + +FG+ + L Sbjct: 118 EIESPLEADRLVEAAERLGLRPRVAVRVNPDFEVKGSGMRMGGGAQ-QFGVDAETVPLLL 176 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 +++G + GSQ E A + DL +L + GG Sbjct: 177 KTLHDRDV-EVAGFHVFSGSQNLHAEILASAQESTVDLVLRLADDLPAAMTYLNIGGGFG 235 Query: 243 AYHSDHRPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 + P D ++++E GR+LV + G+ VT+V+ K Sbjct: 236 IPYYAQDRPLDLDLVGSRLEELLARRVRPSLPSAQVVIELGRYLVGEAGVYVTRVVDRKI 295 Query: 296 SADKTFVILDVAMNDFMR---PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 S KTF+++D M+ + V A + +VG +C D + Sbjct: 296 SRGKTFLVVDGGMHHQLAASGNFGQVIRRNYPISVAAAREGEEETVQVVGCLCTPLDLLG 355 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 + GDL+ + + GAYG S T + S E++V Sbjct: 356 DKVSLPRAEVGDLVVVHQAGAYGLTASPTAFLSHPAPLEVLV 397 >gi|15724139|gb|AAL06466.1|AF411043_1 ornithine decarboxylase [Musca domestica] gi|1297346|gb|AAA98981.1| ornithine decarboxylase [Musca domestica] Length = 396 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 77/378 (20%), Positives = 153/378 (40%), Gaps = 21/378 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + T +++ Y ++ + YA+K N + ++KTLA LG+ D S+GE+++ Sbjct: 32 LFVCDLTRLKEKYDMWTKYMPRVKP--YYAVKCNDDGHIVKTLAELGTNFDCASKGEIKQ 89 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V +RI+F+ K I ++ A + G+ V++E E+ L++ Sbjct: 90 VLDLGVHPDRIIFAQPCKPISHLEYAKEMGVMTSTVDTEFEIHKLHKHFPESNLVIRFRC 149 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 DKFG + + +K+ G H+GS + + Sbjct: 150 EAKEA----------QCPLGDKFGCDAENEATSLMLLAKSLNLKVIGTSFHVGSGCNDLP 199 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ +A + ++L + G+ + +D+GGG + + + + ++F + + Sbjct: 200 AYDRAITIAKNLFKFGALLGYEMNLLDIGGGFPGSDNKKFEKIAEI-VNKSLMRHFPDDK 258 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT------FVILDVAMNDFMRPTLYDAYHE 322 II EPGRF VA L+ K+ + ++ L+ + LYD H Sbjct: 259 VNIIAEPGRFFVASAYTLICKIHAKGEARLPNGKLLTKMYYLNDGVYGSFNCILYDHQHA 318 Query: 323 INYI--VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + ++ I GP C+ D IA + ++ + GD L GAY + Sbjct: 319 EVQHFVDEENAEVPKFNSLIWGPTCDALDKIAEDLQLPDLKCGDFLAFPNMGAYTIPIAS 378 Query: 381 TYNSRLLIPEIMVNGSQF 398 +N +L + + ++ Sbjct: 379 PFNGFMLPKILYFHKAKI 396 >gi|23014264|ref|ZP_00054090.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 460 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 83/427 (19%), Positives = 165/427 (38%), Gaps = 29/427 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVC-YALKANSNQAVIKT 70 + V +E L +P + S + +N AF+ +V ++ K N A+ + Sbjct: 39 IDGVDVEYLMSRYGSPLFIASERRLRENVRRVRGAFERHYRPVVHGWSYKTNYTSAICRI 98 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L GS ++VS E +A + VP RI+F+G K ++ A+ G +V+ EL Sbjct: 99 LHQEGSWAEVVSAFEYEKARSLGVPGNRIIFNGPNKPRAILERAIAEGAR-LHVDHLDEL 157 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + A G+ P+ R+N + + F + Q HS + Sbjct: 158 ELIERIAREKGEVVPVTLRLNFNTG------YTDPWSRFGFNLESGQAHSAASRIKRSAH 211 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG--------LGI 242 ++++G+ HIG+ I + ++ + +L+ + + + ++G + GG GI Sbjct: 212 LRLTGLHSHIGTFILETRAYAEQVRLMCNFMKTVEADGECVIDAIDIGGGLPSRNALQGI 271 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKK 295 + P+ +Y + + + +E GR +V D L + V+ K+ Sbjct: 272 YLPPEQAVPAVEEYGAAVCSALEECLADRVGPHPTLFIESGRAVVDDAVSLASTVVGTKR 331 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 D + A + M L+ + + GP+C D + Sbjct: 332 LPDGRAAAVLDAGINSMLTALWYHHPVKLTKPKAGDSADTVLY---GPMCMNIDVMRHTV 388 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELD 414 ++ GD L GAY Q + ++++ + +IR T +++ D Sbjct: 389 QLPPLSVGDCLVFNPVGAYNNTQWLQFIEY-RPAVVLIHSDGEHSVIREAETIEDMNRHD 447 Query: 415 SIPAWLQ 421 +P LQ Sbjct: 448 RLPTHLQ 454 >gi|73979725|ref|XP_848547.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 2 [Canis familiaris] gi|73979741|ref|XP_856711.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 9 [Canis familiaris] Length = 461 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 84/382 (21%), Positives = 139/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++ ++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAREL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPAD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 ++I EPGR+ VA L + + + D F Sbjct: 267 SGVRVIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDEKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPTIYYV 408 >gi|154150589|ref|YP_001404207.1| Orn/DAP/Arg decarboxylase 2 [Candidatus Methanoregula boonei 6A8] gi|153999141|gb|ABS55564.1| Orn/DAP/Arg decarboxylase 2 [Methanoregula boonei 6A8] Length = 397 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 79/382 (20%), Positives = 130/382 (34%), Gaps = 22/382 (5%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 + LA TP + I +NY F F + +A+KANSN ++KTL LG+ Sbjct: 26 QALARKEGTPLFVIDHAKIRENYREFKKNFPKIQA--YFAVKANSNPGIVKTLMDLGASF 83 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D+ S E K + E + V Sbjct: 84 DVASMPEFMIVHNFIKDM-------PDKERQDFIWDRIIYANTIKPIETLEELNQYKPLV 136 Query: 139 SLGKKAPIAFRVNPDINANT------HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + + A S + KFG + L A L V Sbjct: 137 TFDNIEELKKIRQHAPQAGLVLRLRVPNTGSMVELSSKFGADPGEAVDLIKAAFDLGLV- 195 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPP 251 + G+ H+GSQ E++ A ++ ++ ++ I+ +D+GGG + Y+ + R Sbjct: 196 VEGLSFHVGSQCTNFENYVVALQISANIIEETEHRTGRKIRILDIGGGFPVKYNPEVRSI 255 Query: 252 SSSDYASLIHQYFGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 I EPGRFLVA+ LV KV+ K ++ + Sbjct: 256 EELAVKLKAEIARLFPDDMEILAEPGRFLVANACTLVAKVVGKAYRDGKPCYYINDGVYH 315 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 ++D + + + GP C+ D I L+ ++ GDL+Y Sbjct: 316 TYSGQVFDHCTYPVLAFK---EGPRQISAVFGPTCDAFDTITLSAELPELDIGDLVYSVN 372 Query: 371 TGAYGAVQSGTYNSRLLIPEIM 392 GAY S +N ++ Sbjct: 373 IGAYSIASSTYFNGFP-PAKVF 393 >gi|159038615|ref|YP_001537868.1| Orn/DAP/Arg decarboxylase 2 [Salinispora arenicola CNS-205] gi|157917450|gb|ABV98877.1| Orn/DAP/Arg decarboxylase 2 [Salinispora arenicola CNS-205] Length = 418 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 96/387 (24%), Positives = 174/387 (44%), Gaps = 15/387 (3%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 VQTP Y Y + N + A + + Y+LKAN + A++ TL G+ ++ S G Sbjct: 22 VQTPAYVYDLAEVRANAVRLRAALPE-RSEIYYSLKANPHPAILDTLREQGARAEVCSVG 80 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 EL +LAA P + ++++G GK ++ AL+ G+ F+V+S L L++ A G +A Sbjct: 81 ELDESLAAGWPPDTLLYTGPGKRDQDLRHALRRGVREFSVDSPIGLDQLDRLAGEAGVQA 140 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 R+N D TG +FG+ + + + A + + G+ +++G+ + Sbjct: 141 RCLLRINDDQPVPGQGLTMTGVAS-QFGVDVSWVFADPARFTGGLNAPVVGLHLYMGTNM 199 Query: 205 DQIESFHKAFKLLRDLTQQLRS----NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 ++ F QLR +G ++ +D+GGG G + P S + Sbjct: 200 TEVHDLLAQFGRSLATAAQLRCALARHGVRLRVVDLGGGFGAPFACVGEPVVLSGLRDGL 259 Query: 261 HQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 ++ + + +++ E GR+LV G LVT+V+ +K+S + V+L+ +N Sbjct: 260 YRLLDAELPGWRDGAVRVVFESGRYLVGTAGTLVTRVLDVKRSHGRDLVVLESGINHLGG 319 Query: 314 PTLYDAYHEINYI-VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + +N ++ + GP+C D + N ++ PGD L + G Sbjct: 320 MSGLRRLPPLNPHLLSDTAAGDLRPTMVAGPLCTPLDLWSRNAPLSPLHPGDTLQVPNVG 379 Query: 373 AYGAVQS-GTYNSRLLIPEIMVNGSQF 398 AYG S + S E+ V+G Q Sbjct: 380 AYGLSASLLAFLSHPTPTEVAVDGDQV 406 >gi|311235443|gb|ADP88296.1| cyclic nucleotide-binding protein [Desulfovibrio vulgaris RCH1] Length = 541 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 160/441 (36%), Gaps = 40/441 (9%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSN 64 +G L S LA TP A+ D + Y+ K N Sbjct: 39 EDGVLTVGGASAVALAAAYGTPLLVVDEKALRAKVAEVRAVLDDELPGARLTYSYKTNCI 98 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +++ L G G + +S E A + VP E+++++GV K+ + + +A+ G N+ Sbjct: 99 PGILRVLHDAGVGAEAISAYEYWLAQSLGVPGEQLIYNGVDKSPESLAMAVAHGAL-INI 157 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E+ + A + G+ A I R+ + +A + + + + + + + Sbjct: 158 DNRDEVDAVLATARAQGRVARIGLRLGLNRSAQFGLDPDSAEGDGDIAHVVARCKAHPEH 217 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIA 243 AS + + ++ S + L D+ + R +G +I+ +DVGGG G+ Sbjct: 218 AS------LEALHFNVTSNARHSGYHVRCLALALDVMRTLARVHGVHIRLLDVGGGFGVQ 271 Query: 244 YHSDHRPPSSSDYASL----------------------------IHQYFGNLQCKIILEP 275 + Y + Q + LEP Sbjct: 272 TSKNMSGVEYGLYRLFGVAPGGAWLDPFQDFRLYIRDMAALLTSYCRDNALPQPVVCLEP 331 Query: 276 GRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH 335 GR L + +L+T+V ++K+ + D ++ N L Sbjct: 332 GRLLTSGAELLLTRVKAVKERPGAEPFAITDGGRLSQAYPC-DFEWHEAFLANDLRRPLA 390 Query: 336 IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 + G +C D++ + + GD+L + GAY + + + + + V Sbjct: 391 RAYTVTGRVCTRSDWLYRGKVMPELASGDILAVLDAGAYFSSYAMNF-AFPRAAVVGVED 449 Query: 396 SQFHIIRPRMTFQELIELDSI 416 + ++R R TF+ L +D + Sbjct: 450 GRARVMRHRETFRHLTAMDEV 470 >gi|46562189|ref|YP_009103.1| Orn/DAP/Arg family decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|46447726|gb|AAS94392.1| Orn/DAP/Arg family decarboxylase [Desulfovibrio vulgaris str. Hildenborough] Length = 518 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 160/441 (36%), Gaps = 40/441 (9%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSN 64 +G L S LA TP A+ D + Y+ K N Sbjct: 16 EDGVLTVGGASAVALAAAYGTPLLVVDEKALRAKVAEVRAVLDDELPGARLTYSYKTNCI 75 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +++ L G G + +S E A + VP E+++++GV K+ + + +A+ G N+ Sbjct: 76 PGILRVLHDAGVGAEAISAYEYWLAQSLGVPGEQLIYNGVDKSPESLAMAVAHGAL-INI 134 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E+ + A + G+ A I R+ + +A + + + + + + + Sbjct: 135 DNRDEVDAVLATARAQGRVARIGLRLGLNRSAQFGLDPDSAEGDGDIAHVVARCKAHPEH 194 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIA 243 AS + + ++ S + L D+ + R +G +I+ +DVGGG G+ Sbjct: 195 AS------LEALHFNVTSNARHSGYHVRCLALALDVMRTLARVHGVHIRLLDVGGGFGVQ 248 Query: 244 YHSDHRPPSSSDYASL----------------------------IHQYFGNLQCKIILEP 275 + Y + Q + LEP Sbjct: 249 TSKNMSGVEYGLYRLFGVAPGGAWLDPFQDFRLYIRDMAALLTSYCRDNALPQPVVCLEP 308 Query: 276 GRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH 335 GR L + +L+T+V ++K+ + D ++ N L Sbjct: 309 GRLLTSGAELLLTRVKAVKERPGAEPFAITDGGRLSQAYPC-DFEWHEAFLANDLRRPLA 367 Query: 336 IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 + G +C D++ + + GD+L + GAY + + + + + V Sbjct: 368 RAYTVTGRVCTRSDWLYRGKVMPELASGDILAVLDAGAYFSSYAMNF-AFPRAAVVGVED 426 Query: 396 SQFHIIRPRMTFQELIELDSI 416 + ++R R TF+ L +D + Sbjct: 427 GRARVMRHRETFRHLTAMDEV 447 >gi|190689523|gb|ACE86536.1| ornithine decarboxylase 1 protein [synthetic construct] Length = 461 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 140/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQTMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPTIYYV 408 >gi|118384|sp|P27120|DCOR1_XENLA RecName: Full=Ornithine decarboxylase 1; Short=ODC 1; Short=xODC1 gi|64954|emb|CAA39760.1| ornithine decarboxylase [Xenopus laevis] Length = 460 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 90/417 (21%), Positives = 153/417 (36%), Gaps = 42/417 (10%) Query: 1 MSAFKYFEGSLHA--ENVSLEKLAHVV---------QTPFYCYSTTAIEKNYLTFSNAFD 49 M++F + E S + + FY I K ++ + A Sbjct: 1 MNSFSNDDFDFSFLEEGFSARDIVEQKINEVSLSDDKDAFYVADFGDIVKKHVRWFKALP 60 Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 YA+K N +A++KTL+ LG+G D S+ E++ + V ERI+++ K + Sbjct: 61 R--VTPFYAVKCNDGKAIVKTLSILGAGFDCASKTEIQLVQSIGVSPERIIYANPCKQVS 118 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 +I A G+ +SE EL + + + IA T + + Sbjct: 119 QIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIA----------TDDSKAVCRLSV 168 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 KFG + L A L V I GV H+GS +++ +A R + G Sbjct: 169 KFGATLKTSRLLLERAKEL-NVDIIGVSFHVGSGCTDPQTYVQAVSDARCVFDMGAELGF 227 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILV 287 N+ +D+GGG + + + + + + KII EPGR+ VA L Sbjct: 228 NMHLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVKIIAEPGRYYVASSFTLA 287 Query: 288 TKVISIKKSADK----------------TFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 +I+ K ++ + + D F A+ + P Sbjct: 288 VNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVNDGVYGSFNCILFDHAHVKPVLTKKPKP 347 Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 D + I GP C+ D I ++ + GD + E GAY + T+N Sbjct: 348 DEKFYSSSIWGPTCDGLDRIVERFELPELQVGDWMLFENMGAYTVAAASTFNGFQRP 404 >gi|194757515|ref|XP_001961010.1| GF13654 [Drosophila ananassae] gi|190622308|gb|EDV37832.1| GF13654 [Drosophila ananassae] Length = 396 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 83/397 (20%), Positives = 170/397 (42%), Gaps = 28/397 (7%) Query: 3 AFKYFEGSLH----AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA 58 KY+E L+ E+ +L+ L +++E+ Y + + M CYA Sbjct: 7 EIKYYERELNVRQIIEDSNLQDLDQA----LNICDLSSVERKYQLWKKLLPRI--MPCYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +K N + ++K LA LG+G D S+ EL+ L V ERI+F+ + + +D A ++ Sbjct: 61 VKCNDDPVLVKLLAELGAGFDCASKNELKLVLGFDVSPERIIFANPCRPVSHLDYAKENR 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++E E+ L++ N + + K + DKFG Sbjct: 121 VANGTVDNEFEVYKLHKHYP----------ESNLIVRFKSEAKEAQCPLGDKFGCDADAD 170 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + + + ++G H+GS ++E++ +A K +++ + G+++ +D+GG Sbjct: 171 ATALMLLAKSLDLTVTGTSFHVGSGCSELEAYDRAIKKAKNIFKFGELLGYDMDFLDIGG 230 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 G + + + + + ++F + + +II EPGR+ VA L+ K+ + ++ + Sbjct: 231 GFPGSDDEKFQKIADI-VNTSVEKHFPDERVQIIAEPGRYFVAAAFTLICKIHARREIRN 289 Query: 299 K-------TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 + + + D F + ++ A + + I GP C+ D I Sbjct: 290 EAGKLDTVMYYLNDGVYGSFNCILYDHQVVTAQHYLDDAENLPKFKSLIWGPSCDALDKI 349 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + + ++ GDLL GAY + +N + Sbjct: 350 SEDLRLPNLNRGDLLGFPNMGAYTMPIASPFNGFEIP 386 >gi|166711271|ref|ZP_02242478.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 869 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 111/387 (28%), Positives = 178/387 (45%), Gaps = 18/387 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 HAE L L+ TP Y Y + + +D YA+KAN++ A++ L Sbjct: 493 HAERAHLLSLSKA-GTPRYAYHLPTVRVRARALAQ-IAAVDQR-YYAIKANAHPAILMAL 549 Query: 72 AHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G GL+ VS GE+RR R++F+ E A G+ E Sbjct: 550 EQAGFGLECVSHGEVRRVFQVLPELSPRRVLFTPSFAPKAEYVAAFALGVTVTVDNVE-- 607 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + I R++ H+K++TG K KFG+ ++ A TL Sbjct: 608 ---ALRNWPEVFRGRNIWLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVNVARTLE 664 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 I+GV H+GS ++ E + + L +++ + ++ ID+GGGL I Y +D Sbjct: 665 VT-ITGVHAHLGSGVETGEHWRMMYDELAGFARRIGT----VETIDIGGGLPIPYSADDE 719 Query: 250 PPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P +A + + + ++ +EPGR+LVA+ G+L+ V + + V LD M Sbjct: 720 PFDLDVWAKGLAEVKAVHPGYRLAIEPGRYLVAEAGVLLASVTQVIEKDGVQRVGLDAGM 779 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR-PGDLLY 367 N +RP LYDA+H+I + DIVGPICE+ D R++ PGD++ Sbjct: 780 NTLIRPALYDAWHDIENLSQLDAPADS-TFDIVGPICESSDVFGKRRRLPAATVPGDVVL 838 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + TGAYG + TYN R L E +++ Sbjct: 839 VADTGAYGYSMASTYNQRELPREEVID 865 >gi|218458428|ref|ZP_03498519.1| diaminopimelate decarboxylase protein [Rhizobium etli Kim 5] Length = 179 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 118/175 (67%), Positives = 145/175 (82%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y +G LHAENV + ++A V TPFY YST +E++Y FS AF MD+MVCYA+K Sbjct: 1 MNHFEYRDGILHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSNQAV+KTL LG+G+D+VSEGELRRALAA +PA RI+FSGVGKT E+D AL++GIY Sbjct: 61 ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIY 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 CFNVESE EL+ LNQRAVS GKKAP++FR+NPD++A TH KISTGKKE+KFGI Sbjct: 121 CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISW 175 >gi|259496073|gb|ACW82828.1| ornithine decarboxylase [Spodoptera litura] Length = 448 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 80/387 (20%), Positives = 135/387 (34%), Gaps = 27/387 (6%) Query: 18 LEKLAHVVQT---PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + ++ T PFY + Y + ++ YA+K N ++ ++ TLA L Sbjct: 23 IREIVES-GTQEDPFYVMDLGEVVARYHRWKELMPRVEP--FYAVKCNDDKLLVSTLAAL 79 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+G D S+ E+ + V +RI+F+ K I A G+ +SE+EL + Sbjct: 80 GTGFDCASKAEIELVTSIGVAPDRIIFANPAKMASHIRFASAVGVDVMTFDSETELMKIK 139 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 Q I KFG + + G+ + Sbjct: 140 QYMPHAQLVIRIRCDAASA----------QCPLGIKFGCDPVTEAPRLLKLAAVFGLDVI 189 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 GV H+GS + + + +A L R L + GH I GG S+ Sbjct: 190 GVSFHVGSGASETDVYARAIALSRALFLVGHNVGHKAMRILDIGGGFPGGTHTSIQEVSA 249 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI-------KKSADKTFVILDVA 307 S + ++F ++I EPGR+ A L V + T ++ Sbjct: 250 VINSALEEHFPERSVRVIAEPGRYFAAAAYTLAAMVHAKREVTSKECADETHTMYFINDG 309 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 + LYD H + +N G + GP C+ D + ++ GD L Sbjct: 310 VYGSFNCVLYDHQHVVAEPLNDNGSVP-APCSVWGPTCDGLDCVLPATRLPSLAIGDWLI 368 Query: 368 IEKTGAYGAVQSGTYNSRLLI---PEI 391 GAY + +N + P + Sbjct: 369 FRDMGAYTLPVASPFNGFPVPTVRPVV 395 >gi|219853015|ref|YP_002467447.1| Orn/DAP/Arg decarboxylase 2 [Methanosphaerula palustris E1-9c] gi|219547274|gb|ACL17724.1| Orn/DAP/Arg decarboxylase 2 [Methanosphaerula palustris E1-9c] Length = 404 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 83/396 (20%), Positives = 141/396 (35%), Gaps = 25/396 (6%) Query: 8 EGSLHAENVS---LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 + LH + L+ LA TP + I +NY F D V +A+KANSN Sbjct: 19 DSLLHIDQERKELLQSLAQEHGTPIFVIDHEKIRQNYREFREHLP--DVQVYFAVKANSN 76 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++KTL +G D+ S E K E Sbjct: 77 PEIVKTLFDMGCSFDVASMPEFMVVYENIKD-------LPDKERQEWIWDKIIYANTIKP 129 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANT------HKKISTGKKEDKFGIPIHQI 178 E + V+ + +A S + KFG + Sbjct: 130 IETIEALNQYKPLVTFDNSEELKKIRTYAPHAGLVLRIRVPNTGSMVELSSKFGAEPGEA 189 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVG 237 L + A + V G+ H+GSQ +++ +A +L ++ +++ + I+ +D+G Sbjct: 190 VDLISEAFAMGLVT-EGLSFHVGSQCTNFDNYVQALELSANIIEEVETRTGQKIRILDIG 248 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYF-GNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 GG + YH + + +I+ EPGRFLVA+ LV+KVI Sbjct: 249 GGFPVRYHPEVKSFHLLARRLNTEIERLFPPDMQILAEPGRFLVANACTLVSKVIGKAFR 308 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 K ++ + ++D + + + GP C+ D I L+ + Sbjct: 309 DGKPGYYINDGVYHTYSGQVFDHNTYPVLAFK---EGETQISAVFGPTCDAFDTITLSAE 365 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 + DL+Y E GAY S +N ++ Sbjct: 366 LPDLEINDLVYSENIGAYSIASSTYFNGFP-PATVL 400 >gi|126330477|ref|XP_001381464.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 480 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 77/369 (20%), Positives = 129/369 (34%), Gaps = 22/369 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F + + + F A YA+K N++ +V++ LA+LG+G D S+GEL + Sbjct: 75 FMVADLGVLVEQHQIFQQALPR--VTPFYAVKCNNSPSVLQVLANLGTGFDCASQGELEQ 132 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L + RI+++ K I + A G+ + E E+ + + + + Sbjct: 133 VLRMGIAPTRIIYANTCKQISHLQYAASHGVQLMTFDCEEEIAKIAKFYPTARLVLRLW- 191 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG P+ Q L A L + G H+GS + Sbjct: 192 ---------TQDSESLFPLSAKFGAPLDQCGHLLTLAKDLGVT-VVGACFHVGSGCQTPQ 241 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 SF++A R + GH + +D+GGG + + + + Sbjct: 242 SFNEAIADARHVFDLGLQIGHPMSLLDIGGGFPGKKNFVPTFEEMAAVINRALDQYFPEG 301 Query: 267 LQCKIILEPGRFLVADVGILVTKVI------SIKKSADKTFVILDVAMNDFMRPTLYDAY 320 KII EPGRF V +I + + + + D F Sbjct: 302 SGVKIISEPGRFYATMVCTAALNIIGKKDLVAEQGGRKLMYYLNDGFYTSFAIIRREKES 361 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIA-LNRKIALPRPGDLLYIEKTGAYGAVQS 379 + L + + GP C+ D + + + GD L E GAY S Sbjct: 362 RTPLVVKKFNCKPLLYPSILWGPTCDAFDRLGPTDVLLPELHVGDWLIFEDMGAYTYTTS 421 Query: 380 GTYNSRLLI 388 +N Sbjct: 422 SNFNGFSRP 430 >gi|297668211|ref|XP_002812342.1| PREDICTED: ornithine decarboxylase-like [Pongo abelii] Length = 461 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 87/382 (22%), Positives = 144/382 (37%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKAVPR--VTPFYAVKCNDSKAIVKTLAAVGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK---------------SADKTFVILDVAMNDF 311 +II EPGR+ VA L +I+ K + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKMVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPTIYYV 408 >gi|15644616|ref|NP_229669.1| ornithine decarboxylase [Thermotoga maritima MSB8] gi|148270058|ref|YP_001244518.1| Orn/DAP/Arg decarboxylase 2 [Thermotoga petrophila RKU-1] gi|281412061|ref|YP_003346140.1| Ornithine decarboxylase [Thermotoga naphthophila RKU-10] gi|4982459|gb|AAD36935.1|AE001824_4 ornithine decarboxylase [Thermotoga maritima MSB8] gi|147735602|gb|ABQ46942.1| ornithine decarboxylase [Thermotoga petrophila RKU-1] gi|281373164|gb|ADA66726.1| Ornithine decarboxylase [Thermotoga naphthophila RKU-10] Length = 388 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 96/382 (25%), Positives = 167/382 (43%), Gaps = 19/382 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + + VV+TPF + + +EK YL A D + YA+KANS+ +I LA LGS Sbjct: 6 IRRALEVVKTPFLLFDLSVVEKKYLEMKAALKKAD--IYYAVKANSHPRIISLLARLGSN 63 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+ S+GE+ + LA V +R+ F K ++I A ++GI F V+SE E++ + A Sbjct: 64 FDVASKGEIEKLLALGVDGKRMSFGNTIKREEDIAFAYKNGIRLFAVDSEMEVEKVAINA 123 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + T + KFG L +YAS + + +G+ Sbjct: 124 PGSFVFVRV----------ETDGADADWPLSRKFGTNPEHALQLLSYASKMKLI-PAGLS 172 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 H+GSQ ES+ KA ++ + ++ +G N+ ++VGGG + + A Sbjct: 173 FHVGSQNLNPESWKKAIEIAGRVFKKAMRSGLNLFLLNVGGGFPVQHTKPIPSMEEIGKA 232 Query: 258 S---LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + K+I EPGR++V + G LVTKV+ + + + +V +D + + Sbjct: 233 IEEAIDENLWFVHNLKVIAEPGRYMVGEAGWLVTKVLLKSERSGEKWVYIDAGVFHGLAE 292 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGA 373 T+ + +EI + + GP C++ D I + DL+ GA Sbjct: 293 TIQNFEYEIRVLGKER--EELEEYHLAGPTCDSVDVIYDRIFLPKSITLNDLVCFINAGA 350 Query: 374 YGAVQSGTYNSRLLIPEIMVNG 395 Y + +N + + Sbjct: 351 YTVEYNTRFNGIEPPKMVFIEE 372 >gi|189239038|ref|XP_968571.2| PREDICTED: similar to ornithine decarboxylase [Tribolium castaneum] Length = 433 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 79/381 (20%), Positives = 140/381 (36%), Gaps = 19/381 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I + + T+ YA+K N + V++ LA LG+G D S+GE+ + Sbjct: 13 FYVCDVGDIVRKHKTWKAFLPR--VQPHYAVKCNDSLTVLEVLAALGTGFDCASKGEINK 70 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ V +RI+F+ K I A + + ++E+EL + I Sbjct: 71 VLSLGVSPDRIIFANPAKPSSHIRHAAATNVSTMTFDNETELHKIKNFHPDSKLVIRIRC 130 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S KFG + + + GV H+GS + Sbjct: 131 DATD----------SQCPLGMKFGCDPVLEAPRLLQTARSLNLNVIGVSFHVGSGCREPS 180 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 F +A + R++ ++ G+N +D+GGG + + S + YF + Sbjct: 181 VFKRAIAMSREVFDLGQALGYNFTLLDIGGGFPGDRGTSLDEIAQ-VVNSALDDYFPDPS 239 Query: 269 CKIILEPGRFLVADVG------ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 +II EPGRF V+ + VIS ++ ++ + LYD Sbjct: 240 VEIIAEPGRFYVSSAYTLICNIHSIRDVISEDETTRHRMYYINDGVYGSFNCILYDHQRV 299 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + ++ + + I GP C+ D + + GD L E GAY + + Sbjct: 300 VPLPLHEVPGSKYYSSSIWGPTCDGLDQVVEEVLLPEMGLGDWLVFENMGAYTLPVASPF 359 Query: 383 NSRLLIPEIMVNGSQFHIIRP 403 N + +V ++ Sbjct: 360 NGFPVAKVHVVADESIWVLLK 380 >gi|118380|sp|P27119|DCOR_MUSPA RecName: Full=Ornithine decarboxylase; Short=ODC gi|200124|gb|AAA39847.1| ornithine decarboxylase [Mus pahari] Length = 461 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 87/382 (22%), Positives = 142/382 (37%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++ TLA G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRAIVSTLAATGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP ERI+++ K + +I A SG+ +SE EL + + IA Sbjct: 98 VQGLGVPPERIIYANPCKQVSQIKYAASSGVQMMTFDSEIELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + + Sbjct: 207 TFVQAVSDARCVFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAMNDF 311 +II EPGR+ VA L +I+ K + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPNIYYV 408 >gi|270010871|gb|EFA07319.1| hypothetical protein TcasGA2_TC015912 [Tribolium castaneum] Length = 456 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 79/381 (20%), Positives = 140/381 (36%), Gaps = 19/381 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I + + T+ YA+K N + V++ LA LG+G D S+GE+ + Sbjct: 36 FYVCDVGDIVRKHKTWKAFLPR--VQPHYAVKCNDSLTVLEVLAALGTGFDCASKGEINK 93 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ V +RI+F+ K I A + + ++E+EL + I Sbjct: 94 VLSLGVSPDRIIFANPAKPSSHIRHAAATNVSTMTFDNETELHKIKNFHPDSKLVIRIRC 153 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S KFG + + + GV H+GS + Sbjct: 154 DATD----------SQCPLGMKFGCDPVLEAPRLLQTARSLNLNVIGVSFHVGSGCREPS 203 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 F +A + R++ ++ G+N +D+GGG + + S + YF + Sbjct: 204 VFKRAIAMSREVFDLGQALGYNFTLLDIGGGFPGDRGTSLDEIAQ-VVNSALDDYFPDPS 262 Query: 269 CKIILEPGRFLVADVG------ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 +II EPGRF V+ + VIS ++ ++ + LYD Sbjct: 263 VEIIAEPGRFYVSSAYTLICNIHSIRDVISEDETTRHRMYYINDGVYGSFNCILYDHQRV 322 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + ++ + + I GP C+ D + + GD L E GAY + + Sbjct: 323 VPLPLHEVPGSKYYSSSIWGPTCDGLDQVVEEVLLPEMGLGDWLVFENMGAYTLPVASPF 382 Query: 383 NSRLLIPEIMVNGSQFHIIRP 403 N + +V ++ Sbjct: 383 NGFPVAKVHVVADESIWVLLK 403 >gi|310923182|ref|NP_001185615.1| ornithine decarboxylase 1 [Macaca mulatta] Length = 461 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 141/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAAVGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQNLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVTRAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLRNSRLLLERAKEL-NIDVVGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + ++ + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEEVKLKFEEITNVINPALDKYFPAD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPTIYYV 408 >gi|114576087|ref|XP_001157086.1| PREDICTED: ornithine decarboxylase 1 isoform 6 [Pan troglodytes] Length = 457 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 86/378 (22%), Positives = 143/378 (37%), Gaps = 26/378 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK-----------SADKTFVILDVAMNDFMRPT 315 +II EPGR+ VA L +I+ K + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDGIEQTFMYYVNDGVYGSFNCIL 326 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 A+ + P D + + I GP C+ D I + GD + E GAY Sbjct: 327 YDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYT 386 Query: 376 AVQSGTYNSRLLIPEIMV 393 + T+N V Sbjct: 387 VAAASTFNGFQRPTIYYV 404 >gi|119468237|ref|ZP_01611363.1| diaminopimelate decarboxylase, PLP-binding protein [Alteromonadales bacterium TW-7] gi|119448230|gb|EAW29494.1| diaminopimelate decarboxylase, PLP-binding protein [Alteromonadales bacterium TW-7] Length = 401 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 81/399 (20%), Positives = 157/399 (39%), Gaps = 11/399 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ KL + TPF+ Y + + D + YA+KAN VI++L G Sbjct: 11 AVNKLTQQLDTPFFVYDLDKLNAHLTRLVA---QTDVKLWYAVKANPLSKVIQSLDSAGF 67 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S+GEL + LA + ++R++ +G K+ +I ++ G+ F ES ++++ LNQ+ Sbjct: 68 NFDVASKGELEQVLAQGISSQRVLNTGPAKSPKQIKYFIERGVRIFVAESLNQVRWLNQQ 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A + + RV + + + P + G+ Sbjct: 128 AQLQNTQLQVLLRVQLRWPEGEKNPLGG---DSLTPFGLGCDEWQALNTGDYPALNFDGL 184 Query: 197 DMHIGSQIDQIESFHKAF-KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + + + + + +++ LT + N++ +D+GGGLGI Y + Sbjct: 185 HIFQWGNMLSTQKLSELWSQMIAPLTTLANNLNINLKILDLGGGLGIPYTQNETILEWDG 244 Query: 256 Y-ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 A+L ++ +E GR+ V + G VI K++ + VIL +N +RP Sbjct: 245 LIAALAKIKKEACVDELWMELGRYAVGECGHYANPVIECKQNYGQQQVILTGGINHLLRP 304 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + GP+C D + + + + D L + GAY Sbjct: 305 AVTSQDFPAALLRE--STAPEQAMSLYGPLCTALDCLGEHTLPSDLKEQDWLVFSQCGAY 362 Query: 375 GAVQSGTY-NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 G +S Y L E ++ + +R + Sbjct: 363 GFTESMPYFLCHELAAEYVLQNGELTCVRQAEDASHYLR 401 >gi|239617956|ref|YP_002941278.1| Ornithine decarboxylase [Kosmotoga olearia TBF 19.5.1] gi|239506787|gb|ACR80274.1| Ornithine decarboxylase [Kosmotoga olearia TBF 19.5.1] Length = 386 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 104/382 (27%), Positives = 174/382 (45%), Gaps = 20/382 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + +++ V+QTPF +EKNY D V YA+KANS+ +I L LGS Sbjct: 7 IRQISRVLQTPFLVMDLKYVEKNYYDLVRNIK--DVRVFYAVKANSHPRIISLLRDLGSS 64 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+ S GE+ + L+ VPAE++ F K +++I A GI F V+SE E++ + A Sbjct: 65 FDVASRGEIEKLLSLDVPAEKLSFGNTIKKVEDIAYAHSVGIEYFAVDSEMEVEKIAAHA 124 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 IA T S KFG + + S+ YAS L + GV Sbjct: 125 PGSKVYGRIA----------TSGADSDWPLSRKFGTDVEHVISILEYASRLG-LDAYGVS 173 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY---HSDHRPPSSS 254 H+GSQ ++++ A + + + LR+ G N++ +++GGG+ + + ++ Sbjct: 174 FHVGSQNYSVKNWETAIQDASKVFKALRAKGVNLRMLNLGGGIPVKHVREIPSIEEIAAC 233 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 AS+ ++ +EPGR +V D GI+VT VI K ++ ++ +D + + Sbjct: 234 INASIEKYLGFVPNLEVFIEPGRSMVGDAGIMVTSVILKSKKGNEDWLYIDAGVFHGLTE 293 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGA 373 T+ + +E+ V D + GP C++ D I + K+ GD+LY GA Sbjct: 294 TIENFRYEVITDVE---DNNLKTFHLAGPSCDSVDTIYDDIKLPRSISYGDILYFLNAGA 350 Query: 374 YGAVQSGTYNSRLLIPEIMVNG 395 Y +N V+ Sbjct: 351 YTTEYGTHFNGIEPPRIYFVDE 372 >gi|167534885|ref|XP_001749117.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772270|gb|EDQ85923.1| predicted protein [Monosiga brevicollis MX1] Length = 570 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 80/383 (20%), Positives = 136/383 (35%), Gaps = 37/383 (9%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 + + + F + YA+K N + +++ L LG D S+GE+ + Sbjct: 106 FLLDLAQVVRQQRRFERQLP--NVQPFYAVKCNPDPHILRALDALGVNFDCASKGEMAQV 163 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L V ERI+F+ K I + A + G+ ++E E L++ V + + Sbjct: 164 LDMGVAPERIIFANPCKPISHLRAARRWGVQLMTFDNEDE---LDKIHVHYPEAQLVLRV 220 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 + D +A + KFG P+ + L A L + GV H+GS + Sbjct: 221 LADDSSA-------VCRLGLKFGAPLSVVPRLLRRALELDL-NLVGVSFHVGSGCTDANA 272 Query: 210 FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR-------PPSSSDYASLIHQ 262 F A R + G ++ +DVGGG A + + +L Sbjct: 273 FADAVHRARQVFDMATELGVCLKILDVGGGFPGADETSTNSKDVTFADIAHHLRQALQRH 332 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIK----------KSADKTFVILDVAMNDFM 312 + I+ EPGRF L VI+ + + + N + Sbjct: 333 FGHLPDLTIMAEPGRFYAHSAVTLAVNVIARRGASGRPGEEDHVRYYVSDGVYGSFNCLL 392 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHAD-------IVGPICETGDFIALNRKIALPRPGDL 365 + + D H+ D + GP C++ D IA ++ L GD Sbjct: 393 FDHASVRGLPLLRAADADHDPNHVDHDLKLHASSVWGPTCDSLDCIAREAQLPLLEVGDW 452 Query: 366 LYIEKTGAYGAVQSGTYNSRLLI 388 L GAY A + T+N + Sbjct: 453 LVYHDMGAYTACAASTFNGFVRP 475 >gi|269964928|ref|ZP_06179098.1| Diaminopimelate decarboxylase [Vibrio alginolyticus 40B] gi|269830404|gb|EEZ84628.1| Diaminopimelate decarboxylase [Vibrio alginolyticus 40B] Length = 222 Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats. Identities = 99/216 (45%), Positives = 136/216 (62%), Gaps = 1/216 (0%) Query: 1 MSAFKYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + G L AE+V L+ LA TP Y YS +E+++ F +A +VCYA+ Sbjct: 1 MDYFNYQDDGQLWAEDVPLQALAEQYGTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAV 60 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KANSN V+ TLA LGSG DIVS GEL R +AA +++VFSGVGKT E+ AL+ GI Sbjct: 61 KANSNLGVLNTLARLGSGFDIVSGGELERVIAAGGDPKKVVFSGVGKTPAEMKRALELGI 120 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 CFNVESE EL+ LN+ A LG API+ R+NPD++A TH ISTG +++KFGI + Sbjct: 121 KCFNVESEPELERLNKVAGELGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP 180 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFK 215 +Y +A +LP + + G+D+ DQ ++ + Sbjct: 181 DVYKFAQSLPNLNVQGIDVPHWFSADQYRPIYRRDR 216 >gi|75675117|ref|YP_317538.1| Orn/DAP/Arg decarboxylase 2 [Nitrobacter winogradskyi Nb-255] gi|74419987|gb|ABA04186.1| ornithine decarboxylase [Nitrobacter winogradskyi Nb-255] Length = 380 Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 89/367 (24%), Positives = 146/367 (39%), Gaps = 20/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY F+ A D+ V YA+KAN V+ LA LGS D + E+ Sbjct: 21 PCLVVDLDIVRDNYQAFAKALP--DSRVFYAVKANPAPEVLSLLASLGSCFDTATVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +RI F K +I A GI F V+ +E++ + + A I Sbjct: 79 MALAAGATPDRISFGNTIKKERDIARAYALGIRLFAVDCHAEVEKIARAAPGAKVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 139 YDCAGA----------EWPLSRKFGCDPEMAVEVLDLAKRLS-LEPIGISFHVGSQQRKV 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A ++ + + G N+ +++GGG Y D P + ++FG Sbjct: 188 KAWDRALAMVSQVFRDCAERGINLTMVNMGGGFPTRYLKDVPPVVQYGRSIFRALRKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I + +D I Y Sbjct: 248 NQIPETIIEPGRGMVGNAGVIEAEVVLISRKSDNEESRWVYLDIGKFGGLAETMDESIRY 307 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + + GP C++ D + + LP GD L IE TGAY + S Sbjct: 308 AIRTPHDGAEMTPCVLAGPTCDSADVLYEKQPYPLPVTLEIGDKLLIEGTGAYTSTYSSV 367 Query: 382 -YNSRLL 387 +N Sbjct: 368 AFNGFPP 374 >gi|241699676|ref|XP_002413144.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215506958|gb|EEC16452.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 443 Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 82/370 (22%), Positives = 133/370 (35%), Gaps = 20/370 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF+ I + YA+K NS+ AV++ +A LG G D S+ E+ Sbjct: 31 PFFVVDVADIVYKIKLWK--LKIPRVEPFYAVKCNSDAAVLELMAGLGLGFDCASKAEID 88 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + V RI+++ KT I A G+ ++E EL + + I Sbjct: 89 VVRSLGVSPSRIIYANPCKTKSFIKHAAAQGVDLMTFDNEQELYKVKELFPLARLVIRIR 148 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 S + KFG + L A +L + GV H+GS + Sbjct: 149 VD----------DSGSVCQLGLKFGCEVSDAQHLLTIAKSLGLS-VVGVSFHVGSNSREP 197 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD--HRPPSSSDYASLIHQYFG 265 SF +A + R + Q + G ++ +D+GGG + + SL + Sbjct: 198 MSFARAIESARLVFDQGLAMGFPMELLDIGGGYPGDRGFQKLFDKITQTINGSLALHFPE 257 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIK----KSADKTFVILDVAMNDFMRPTLYDAYH 321 ++I EPGRF VA L T VI+ + + + + + H Sbjct: 258 ETGVRVISEPGRFFVASAFTLYTTVIAKREVLLPGSALPRAMYYLNDGVYGSFNCTVFDH 317 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 G + GP C++ D I + GD + E GAY S Sbjct: 318 AEPVPFALRGGGPLRPCSLWGPTCDSMDQILEEALLPDLGVGDWVVFENMGAYTLCASSN 377 Query: 382 YNSRLLIPEI 391 +N +PE+ Sbjct: 378 FNGFQ-VPEV 386 >gi|6435612|pdb|7ODC|A Chain A, Crystal Structure Ornithine Decarboxylase From Mouse, Truncated 37 Residues From The C-Terminus, To 1.6 Angstrom Resolution Length = 424 Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 144/382 (37%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++ TLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPAER++++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS + Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPD 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + + Sbjct: 207 TFVQAVSDARCVFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAMNDF 311 +II EPGR+ VA L +I+ K + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPNIYYV 408 >gi|294011486|ref|YP_003544946.1| diaminopimelate decarboxylase [Sphingobium japonicum UT26S] gi|292674816|dbj|BAI96334.1| diaminopimelate decarboxylase [Sphingobium japonicum UT26S] Length = 410 Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 92/403 (22%), Positives = 149/403 (36%), Gaps = 15/403 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 F EG L L TP + Y +E F +A + YA+KA Sbjct: 10 FFAGEEGMLLIGGCGAASLVEEAGDTPLFVYDMGIVEGQARAFRDAMPAA-LSLHYAVKA 68 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N + +++ +A L G D+ S GEL RAL A + A I F+G GK DE+ +A+ SG Sbjct: 69 NPHALLLERMAKLVDGFDVASGGELARALEAGMDAAHISFAGPGKRDDELIVAIDSGATI 128 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 E + A G+ +A RVNPD + G + FG+ + +L Sbjct: 129 NLESEG-EARRAIALAERRGRTPKLAVRVNPDFDLKGSGMRMGGGAK-PFGVDAERAAAL 186 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 G + + + + G +++GGG G Sbjct: 187 ARRVIEAGGEWRGWHIFAGSQALGAQALIETQAATVDLAARLSEAVGAAPPLVNLGGGFG 246 Query: 242 IAYHSDHRPPSSSDYA-----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 I Y L + +E GR+LV + G+ +T+++ +KKS Sbjct: 247 IPYFPGDERLDIRPIGDALGGMLDRRADILQDSAFAMELGRWLVGEAGVYLTRIVDVKKS 306 Query: 297 ADKTFVILDVAMNDF-----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 +TFV++D ++ T+ + I +VG +C D + Sbjct: 307 QGETFVVVDGGLHHQLAASGNFGTVVRRNYPIAVANRFGEASAEDAVTVVGCLCTPIDRL 366 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 + GDL+ I GAYGA S + E+++ Sbjct: 367 GDKVALPPVEEGDLVAIFLAGAYGASASPAAFLGHPAPRELLI 409 >gi|18859145|ref|NP_571876.1| ornithine decarboxylase [Danio rerio] gi|9858179|gb|AAG01031.1|AF290981_1 ornithine decarboxylase [Danio rerio] gi|18652915|dbj|BAB84694.1| ornithine decarboxylase [Danio rerio] gi|28839552|gb|AAH47796.1| Odc1 protein [Danio rerio] gi|39645422|gb|AAH63932.1| Ornithine decarboxylase 1 [Danio rerio] gi|66911315|gb|AAH97034.1| Odc1 protein [Danio rerio] gi|182889558|gb|AAI65342.1| Odc1 protein [Danio rerio] Length = 461 Score = 163 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 85/378 (22%), Positives = 140/378 (37%), Gaps = 31/378 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + K +L + + YA+K N ++AV+ TLA LG+G D S+ E++ Sbjct: 40 FYVADLGDVLKKHLRWLRVLPRITP--FYAVKCNDSRAVVTTLASLGAGFDCASKTEIQI 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V RI+++ K + +I A G+ +SE EL + + + IA Sbjct: 98 VQSVGVDPSRIIYANPCKQVSQIKYASAHGVQMMTFDSEVELMKVARSHENAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKSSRLLLERAKELGL-DVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ +A R + G+N+ +D+GGG + + + + + + + Sbjct: 207 TYSQAISDARYVFDIGAELGYNMSLLDIGGGFPGSEDTKLKFEEIAAVINPALDKYFPVD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY--------- 317 +II EPGR+ VA L +I+ K + + R +Y Sbjct: 267 SGVRIIAEPGRYYVASAYTLAVNIIAKKVIMKEQSASDEEEDVSNDRTLMYYVNDGVYGS 326 Query: 318 -------DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 A+ P D I GP C+ D I + + GD L E Sbjct: 327 FNCILYDHAHVLPTLHKKPKPDERMYPCSIWGPTCDGLDRIVEQCSLPDMQVGDWLLFEN 386 Query: 371 TGAYGAVQSGTYNSRLLI 388 GAY S T+N Sbjct: 387 MGAYTVAASSTFNGFQKP 404 >gi|170288742|ref|YP_001738980.1| Orn/DAP/Arg decarboxylase 2 [Thermotoga sp. RQ2] gi|170176245|gb|ACB09297.1| Orn/DAP/Arg decarboxylase 2 [Thermotoga sp. RQ2] Length = 388 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 94/382 (24%), Positives = 167/382 (43%), Gaps = 19/382 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + + VV+TPF + + +EK YL A D + YA+KANS+ +I LA LGS Sbjct: 6 IRRALEVVKTPFLLFDLSVVEKKYLEMKAALKKAD--IYYAVKANSHPRIISLLARLGSN 63 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+ S+GE+ + LA V +R+ F K ++I A ++GI F V+SE E++ + A Sbjct: 64 FDVASKGEIEKLLALGVDGKRMSFGNTIKREEDIAFAYKNGIRLFAVDSEMEVEKVAINA 123 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + T + KFG L +YAS + + +G+ Sbjct: 124 PGSFVFVRV----------ETDGADADWPLSRKFGTNPEHALQLLSYASKMKLI-PAGLS 172 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 H+GSQ ES+ KA ++ + ++ +G N+ ++VGGG + + A Sbjct: 173 FHVGSQNLNPESWKKAIEIAGRVFKKAMRSGLNLFLLNVGGGFPVQHTKPIPSMEEIGKA 232 Query: 258 S---LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + ++I EPGR++V + G LVTKV+ + + + +V +D + + Sbjct: 233 IEEAIDENLWFVHNLRVIAEPGRYMVGEAGWLVTKVLLKSERSGEKWVYIDAGVFHGLAE 292 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGA 373 T+ + +E+ + + GP C++ D I + DL+ GA Sbjct: 293 TIQNFEYEVRVLGKER--EELEEYHLAGPTCDSVDVIYDRILLPKSITLNDLVCFINAGA 350 Query: 374 YGAVQSGTYNSRLLIPEIMVNG 395 Y + +N + + Sbjct: 351 YTVEYNTRFNGIEPPKMVFIEE 372 >gi|170045392|ref|XP_001850295.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167868455|gb|EDS31838.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 440 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 84/429 (19%), Positives = 158/429 (36%), Gaps = 34/429 (7%) Query: 2 SAFKYFEGSLHAENVSLEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 S+F + + E V + LA + PF+ + + +L + + YA+K Sbjct: 13 SSFNLLDETESVEAVLEQVLAAPAEENPFHLLDLDDVVRKHLNWLRELPRVKP--FYAVK 70 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 N +++++KTLA LG+G D S+GE+ + L V AERI+++ K + + A +G+ Sbjct: 71 CNDDESIVKTLALLGTGFDCASKGEISQVLGLGVGAERIIYAHPIKAKESLVFARNNGVG 130 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 ++E ELK + + I KFG Sbjct: 131 KVTFDNECELKKVAKYYPEAELVLRIR----------HDSDKVLISLGKKFGCDARLDGP 180 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + G+ + GV H+G + F+ A K + L + + G+ +D+GGG Sbjct: 181 ELIRKAQELGLNVIGVSFHVGCGSLDADCFYNAIKSAKFLFEFADTVGYRFSLLDIGGGF 240 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 +++ +L + ++I EPGR+ V L+ + K D Sbjct: 241 PGDVDKPIGEFATAINRALDEFFPNLDGIQVIAEPGRYYVGSAVRLLATINGKKIIRDPA 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEI-------------NYIVNPAGDRLHIHADIVGPICET 347 + + ++ ++ + I +++ + GP C++ Sbjct: 301 DSSRILQVMYYINDGVFGTLFDWVSLRAINDLSRAIPIITKQKREKVQFKTTVWGPTCDS 360 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 D + + G+ L E GAYG + +N I + T+ Sbjct: 361 TDIVCEDVDFPEHDIGEYLLFENIGAYGITFATNFNGFPKP--------TIQIYVKKQTW 412 Query: 408 QELIELDSI 416 L LD I Sbjct: 413 NALAALDGI 421 >gi|6981302|ref|NP_036747.1| ornithine decarboxylase [Rattus norvegicus] gi|118382|sp|P09057|DCOR_RAT RecName: Full=Ornithine decarboxylase; Short=ODC gi|56787|emb|CAA30765.1| ornithine decarboxylase [Rattus norvegicus] gi|205804|gb|AAA41737.1| ornithine decarboxylase (EC 4.1.1.17) [Rattus norvegicus] gi|205808|gb|AAA66164.1| ornithine decarboxylase [Rattus norvegicus] gi|51261226|gb|AAH78882.1| Ornithine decarboxylase 1 [Rattus norvegicus] gi|149050981|gb|EDM03154.1| ornithine decarboxylase 1 [Rattus norvegicus] gi|225925|prf||1403320A Orn decarboxylase Length = 461 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 144/382 (37%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + K +L + A YA+K N ++A++ TLA +G+G D S+ E++ Sbjct: 40 FYVADLGDVLKKHLRWLKALPR--VTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQGLGVPPERIIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + + Sbjct: 207 TFVQAVSDARCVFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADK---------------TFVILDVAMNDF 311 +II EPGR+ VA L +I+ K + + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQTGSDDEDESNEQTLMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCSLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPNIYYV 408 >gi|193706848|ref|XP_001946073.1| PREDICTED: ornithine decarboxylase-like isoform 1 [Acyrthosiphon pisum] gi|328700928|ref|XP_003241430.1| PREDICTED: ornithine decarboxylase-like isoform 2 [Acyrthosiphon pisum] Length = 459 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 80/399 (20%), Positives = 141/399 (35%), Gaps = 19/399 (4%) Query: 3 AFKYFEGSLHAENVSLEKLA--HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 + + E + ++ + + PFY + + + + YA+K Sbjct: 9 QIHVIDNKVTVEEI-IKDIVRTKEISDPFYIFDVGDLVHKARIWQQKLPRVKP--FYAVK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 N N V++TLA G+ D S+ E+++ L V RI+F+ K I A+ + Sbjct: 66 CNDNSLVLETLAAFGTNFDCASKAEIKKVLDLGVNPSRIIFANPAKMTSHIKYAMSQCVD 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 ++E EL + S I + K+G Sbjct: 126 LTTFDNELELYKIKSIHPSCNLVIRIRCDATE----------TQCPLGIKYGCDPLTEAP 175 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI-DVGGG 239 + G+ I GV H+GS ++ +F +A + + + G ++ ++GGG Sbjct: 176 ALMSLARDLGLSIVGVSFHVGSGCNEPAAFRRAIAASAAIFRLAQQLGFMNMYLLNIGGG 235 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS---IKKS 296 + + +L + N II EPGRF VA L TK+ S Sbjct: 236 FPGNKSTSLDKIADIVNDALNEWFPPNNGVTIIAEPGRFFVASAFTLSTKIHSIKKRSND 295 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + ++ + LYD + +N + I GP C+ D + Sbjct: 296 ENHIMYFINDGVYGSFNSILYDHSVVVPKPLNDYPMSPVCQSSIWGPTCDGLDQVVDLVN 355 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 + L R GD + + GAY + T+N L V Sbjct: 356 LPLMRMGDWITFDDMGAYTIPVASTFNGFPLPKVFAVAN 394 >gi|118379|sp|P00860|DCOR_MOUSE RecName: Full=Ornithine decarboxylase; Short=ODC gi|53518|emb|CAA30301.1| ornithine decarboxylase [Mus musculus] gi|200120|gb|AAA39845.1| ornithine decarboxylase [Mus musculus] gi|387500|gb|AAA51638.1| ornithine decarboxylase [Mus musculus] gi|387501|gb|AAA39849.1| ornithine decarboxylase [Mus musculus] gi|404562|gb|AAB27809.1| ornithine decarboxylase [Mus musculus domesticus] Length = 461 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 144/382 (37%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++ TLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPAER++++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS + Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPD 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + + Sbjct: 207 TFVQAVSDARCVFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAMNDF 311 +II EPGR+ VA L +I+ K + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPNIYYV 408 >gi|148556930|ref|YP_001264512.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1] gi|148502120|gb|ABQ70374.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1] Length = 413 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 94/407 (23%), Positives = 176/407 (43%), Gaps = 17/407 (4%) Query: 4 FKYFEGSLHAENVSLEK-LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F + +G+L S ++ +A TP + Y + F AF G+ + YA+KAN Sbjct: 11 FPWRDGALMIGGRSADEWIAVAGDTPLFVYDLAVVRDRIARFRAAFAGVS--LHYAVKAN 68 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + ++ +A L G+D+ S GE + AL A + A RI F+G GK E+ +A+++GI Sbjct: 69 PHPPLVAAIAPLVDGIDVASAGEAQLALDAGMDARRISFAGPGKRDRELAMAIEAGIT-L 127 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 N+ESE E + +G+ +A R+NPD G + FG+ + + Sbjct: 128 NLESEGEAERALAIGRGIGRTPRLALRINPDFELKGSGMKMGGGAK-PFGVDAERAAPII 186 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 G G+ + GSQ ++ +A + L ++ G H+++GGG G Sbjct: 187 RRIVE-AGADYRGLHIFAGSQALDADALVEAQRSALALAARVSVEAGVAPPHVNLGGGFG 245 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQC-----KIILEPGRFLVADVGILVTKVISIKKS 296 I + ++ S + + +E GR+LV + G+ +T+++ K S Sbjct: 246 IPHFANDARLDESRVGGALSSALSRRDPILAEAEFTIELGRWLVGEAGVYLTRIVDRKAS 305 Query: 297 ADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 +TF+++D ++ + + + +VG +C D + Sbjct: 306 HGETFLVVDGGLHHQLAASGNFGTVVRRNYPISLTKYSDSVKVEEVTVVGCLCTPIDRLG 365 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQF 398 + + + GD++ + GAYGA S + EI ++G++ Sbjct: 366 DHVGLPEAKVGDVVALYLAGAYGASASPQAFLGHPSPLEITIDGTRI 412 >gi|131888589|ref|NP_038642.2| ornithine decarboxylase [Mus musculus] gi|37590522|gb|AAH59826.1| Odc1 protein [Mus musculus] gi|52789415|gb|AAH83122.1| Odc1 protein [Mus musculus] gi|74137839|dbj|BAE24082.1| unnamed protein product [Mus musculus] gi|148666078|gb|EDK98494.1| mCG130699 [Mus musculus] gi|189176133|gb|ACD81645.1| ornithine decarboxylase structural 1 [Mus musculus] Length = 461 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 86/382 (22%), Positives = 144/382 (37%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++ TLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPAER++++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + + Sbjct: 207 TFVQAVSDARCVFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAMNDF 311 +II EPGR+ VA L +I+ K + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPNIYYV 408 >gi|114576093|ref|XP_001156697.1| PREDICTED: ornithine decarboxylase 1 isoform 1 [Pan troglodytes] Length = 414 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 84/382 (21%), Positives = 140/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPTIYYV 408 >gi|307293323|ref|ZP_07573169.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Sphingobium chlorophenolicum L-1] gi|306881389|gb|EFN12605.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Sphingobium chlorophenolicum L-1] Length = 410 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 90/403 (22%), Positives = 145/403 (35%), Gaps = 15/403 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 F EG L L TP + Y +E F +A + YA+KA Sbjct: 10 FFTSEEGMLLIGGSGAASLVDEAGDTPLFVYDMAIVEGQARAFRDAMPPTLP-LHYAVKA 68 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N +++ +A L G D+ S GEL RAL A + I F+G GK DE+ A+ SG Sbjct: 69 NPYAPLLQRMAKLVDGFDVASGGELTRALEAGMDPAHISFAGPGKRDDELIAAIDSGTTI 128 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 E + G+ +A RVNPD + G + FG+ + L Sbjct: 129 NLESEG-EARRAIALGEQRGRTPKLAIRVNPDFDLKGSGMRMGGGAK-PFGVDAERAADL 186 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 + + T+ + G +++GGG G Sbjct: 187 ARRVIDAGADWRGWHIFAGSQALGVEALIETQAATIDLATRLSDAVGVTPPLVNLGGGFG 246 Query: 242 IAYHSDHRPPSSSDYASLIHQ-----YFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 I Y + + +E GR+LV + G+ +T+++ IKKS Sbjct: 247 IPYFPGDERLDIRPIGEALDMLLEQRADILQGSEFAMELGRWLVGEAGVYLTRIVDIKKS 306 Query: 297 ADKTFVILDVAMNDF-----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 +TF+++D ++ T+ + I A +VG +C D + Sbjct: 307 QGETFIVVDGGLHHQLAASGNFGTVVRRNYPIAVANRFGQAPAQEAATVVGCLCTPIDRL 366 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 + GDL+ I GAYGA S + E+++ Sbjct: 367 GDKVALPPVEEGDLIAIFLAGAYGASASPAAFLGHPAPLELLI 409 >gi|228936396|ref|ZP_04099194.1| Decarboxylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823228|gb|EEM69062.1| Decarboxylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 411 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 98/393 (24%), Positives = 155/393 (39%), Gaps = 15/393 (3%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + + L +P Y Y+ + Y + D+++ Y+LKAN N V K L +LG Sbjct: 2 IDYKDLIDKHGSPLYIYNLDEVSNAYEKLVASLPD-DSILYYSLKANPNPEVTKHLVNLG 60 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++ S GEL AL + +++G GKT EI AL I F+VES EL +++ Sbjct: 61 CYAEVSSIGELNTALDVGTHPDNCIYTGPGKTRKEIKYALSKNINHFSVESVEELIIIDE 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L K I R+NP TG ++ + +KI+G Sbjct: 121 LASELSKAVNITLRINPAFTVGKASIKMTGIPSQFGFDEESIDANVIQLITKNQNLKING 180 Query: 196 VDMHIGSQIDQ-IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 ++ GS L + + ID GGG + + PS Sbjct: 181 FHIYNGSNFHSVEMIEENFMNTLNTVINLQEKLSLEPEFIDFGGGFAAPFGKNESLPSYE 240 Query: 255 DYASL-----IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 ++ G KI E GR+L A G LV V S+K S K + I+D +N Sbjct: 241 KLKERLTKLLRDKFKGTKSPKIAFESGRYLTATCGTLVGTVQSVKMSKGKKYCIVDFGIN 300 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIH-----ADIVGPICETGDFIALNRKIALPRPGD 364 + + + + +IVGP+C D++A N + PGD Sbjct: 301 HIGGMSGLRRIPTVELQLFKLTSSENDTLIMDNVNIVGPLCTPLDYLAKNVSLGAIEPGD 360 Query: 365 LLYIEKTGAYGAVQSG--TYNSRLLIPEIMVNG 395 +++I GAYG + SR + E+++ Sbjct: 361 IVFISNVGAYGLT-GSLLGFLSREIPNELIIKN 392 >gi|307297673|ref|ZP_07577479.1| Orn/DAP/Arg decarboxylase 2 [Thermotogales bacterium mesG1.Ag.4.2] gi|306916933|gb|EFN47315.1| Orn/DAP/Arg decarboxylase 2 [Thermotogales bacterium mesG1.Ag.4.2] Length = 387 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 95/382 (24%), Positives = 163/382 (42%), Gaps = 19/382 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + K A ++TPF + NY + + V YA+KANS+ +I+TL LGS Sbjct: 7 VRKAAREIKTPFLIMDMDYVRNNYFDIVSHVR--NVQVFYAVKANSHPRIIETLRDLGSN 64 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+ S GE+ + LA + ER+ F K +++I A GI + V+SE E++ + A Sbjct: 65 FDVASRGEIEKLLALGISPERMSFGNTIKKVEDIAYAYSVGIDYYAVDSEMEVEKIAAHA 124 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 IA T KFG + + S+ YA L + GV Sbjct: 125 PGSKVYGRIA----------TSGGDCDWPLSRKFGTDVGHVISIMEYADQLG-LDAYGVS 173 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 H+GSQ + S+ A + ++ + LR+ N++ +++GGG+ + + + + S Sbjct: 174 FHVGSQNYNVNSWDDAIRDASEVFKTLRAKNINLRMLNLGGGMPVKHVREIKSVKSYGDI 233 Query: 258 SLI---HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 ++ +EPGR +V + ILV++VI K + +V +D + + Sbjct: 234 INRALDKYMSFVPDLELFIEPGRSMVGNSAILVSQVILRSKKGSEDWVYIDAGVFHGLTE 293 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGA 373 T+ +E+ D I + GP C++ D I + GD+LY GA Sbjct: 294 TIEGFRYEVLTEGKV--DDTKISFHLAGPTCDSVDTIYHEIDLPKNIGYGDILYFINAGA 351 Query: 374 YGAVQSGTYNSRLLIPEIMVNG 395 Y + +N + V Sbjct: 352 YTTEYATNFNGIDAPRVLFVED 373 >gi|205806|gb|AAA66286.1| ornithine decarboxylase [Rattus norvegicus] Length = 461 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 144/382 (37%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + K +L + A YA+K N ++A++ TLA +G+G D S+ E++ Sbjct: 40 FYVADLGDVLKKHLRWLKALPR--VTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQGLGVPPERIIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + + Sbjct: 207 TFVQAVSDARCVFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADK---------------TFVILDVAMNDF 311 +II EPGR+ VA L +I+ K + + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQTGSDDEDESNEQTLMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCSLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPNIYYV 408 >gi|474034|emb|CAA47165.1| ornithine decarboxylase [Drosophila melanogaster] Length = 394 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 79/383 (20%), Positives = 158/383 (41%), Gaps = 24/383 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 E L++L +++E+N + + YA+K N + V++ LA Sbjct: 21 IEECDLQRLDQA----LNICDLSSVERNVRLWQKLLPRIKP--FYAVKCNDDPMVVRLLA 74 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 LG+G D S+ E++ L V ERI+F+ + + ++ A + + V++E E+ Sbjct: 75 QLGAGFDCASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYK 134 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L+ N + + K + DKFG + + +K Sbjct: 135 LHTHYP----------NSNLIVRFKSEAKEAQCPLGDKFGCDADVDAAALMLLAKSLELK 184 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++G H+GS +++++ +A K ++L + G+++ +D+GGG + Sbjct: 185 VTGTSFHVGSGCSELQAYDRAIKKAKNLFKFGALLGYDMDFLDIGGGFPGS-DDVKFEKI 243 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK-------TFVILD 305 + + + ++F + + II EPGRF VA LV K+ + ++ ++ + + D Sbjct: 244 AESVNTSVQRHFPDERVHIIAEPGRFFVAAACTLVCKIHAKREIRNEAGKLDTVMYYLND 303 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 F + ++ A H+ + I GP C+ D I+ + + GDL Sbjct: 304 GVYGSFNCILYDHQVVIAEHYLDNAESLPHLKSLIWGPSCDALDKISEDLHLPNLNRGDL 363 Query: 366 LYIEKTGAYGAVQSGTYNSRLLI 388 L GAY + +N + Sbjct: 364 LGFRNMGAYTMPIASAFNGFEVP 386 >gi|282864989|ref|ZP_06274043.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE] gi|282560414|gb|EFB65962.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE] Length = 412 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 17/405 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--- 75 LA TP Y Y + A + V YA KAN + +++ + G Sbjct: 5 TDLARRFGTPSYVYDLDRVAAARDELFAALPD-EVAVYYAAKANPHPEILREMRTGGPRV 63 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +I S GEL L A I+++G GKT +E+ A+ G+ F+VES +L+ + + Sbjct: 64 CRAEISSVGELDAVLRAGYEGTEILYTGPGKTTEELAEAMARGVRTFSVESPGDLRHVGE 123 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 AV LG A RVN A TG +FG + L A +PG ++G Sbjct: 124 TAVRLGITADCLIRVNNATGAAATSIRMTGVPS-QFGFDGETLPGLAAELRDVPGTTLAG 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLR-DLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + S S F+ + R G + + +D+GGG Y P Sbjct: 183 LHFFPLSNAKDEASLIAEFRHTIATASALQRELGVDFRIVDLGGGFAAPYAVQGDRPVYG 242 Query: 255 DYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + + E GR+LVAD G L+T V+++K S +V+LD Sbjct: 243 ELRDALATSLDEHFPGWREGAPRIACESGRYLVADSGTLLTSVVNVKDSRGTRYVVLDAG 302 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 +N F + ++ + + + A + GP+C GD + ++ P PGDLL Sbjct: 303 INTFGGMSGLGRILPVSVEPHESVGTDGVPAHLAGPLCTPGDLLGRQVPLSDPAPGDLLT 362 Query: 368 IEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQFHIIRPRM---TFQ 408 + G+YG S + R EI+V G + T++ Sbjct: 363 VPNAGSYGPTASLLMFLGRPAPAEIVVRGDDLVSVSRIEHTRTYE 407 >gi|53749692|ref|NP_001005441.1| ornithine decarboxylase 1 [Xenopus (Silurana) tropicalis] gi|49257730|gb|AAH74547.1| ornithine decarboxylase 1 [Xenopus (Silurana) tropicalis] Length = 460 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 88/417 (21%), Positives = 153/417 (36%), Gaps = 42/417 (10%) Query: 1 MSAFKYFEGSLHA--ENVSLEKLAHVV---------QTPFYCYSTTAIEKNYLTFSNAFD 49 M++F + E + + FY I K ++ + A Sbjct: 1 MNSFSNDDFDFSFLEEGFCARDIVEQKINEVSLSDDKDAFYVADLGDIVKKHVRWFKALP 60 Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 YA+K N ++A++KTL+ LG+G D S+ E++ + V +ERI+++ K + Sbjct: 61 R--VTPFYAVKCNDSKAIVKTLSLLGAGFDCASKTEIQLVQSIGVSSERIIYANPCKQVS 118 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 +I A G+ +SE EL + + + IA T + + Sbjct: 119 QIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIA----------TDDSKAVCRLSV 168 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 KFG + L A L V+I GV H+GS +++ +A R + G Sbjct: 169 KFGATLKTSRLLLERAKEL-NVEIIGVSFHVGSGCTDPQTYVQAVSDARCVFDMGAELGF 227 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILV 287 ++ +D+GGG + + + + + + II EPGR+ VA L Sbjct: 228 SMHLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPVDSGVTIIAEPGRYYVASAFTLA 287 Query: 288 TKVISIKKSADK----------------TFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 +I+ K ++ + + D F A+ + P Sbjct: 288 VNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVNDGVYGSFNCILFDHAHVKPVLTKKPKP 347 Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 D + I GP C+ D I + + GD + E GAY S T+N Sbjct: 348 DESFYSSSIWGPTCDGLDRIVERFDLPELQVGDWMLFENMGAYTVAASSTFNGFQRP 404 >gi|73979735|ref|XP_856595.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 6 [Canis familiaris] Length = 467 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 84/388 (21%), Positives = 139/388 (35%), Gaps = 36/388 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++ ++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAREL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPAD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------------ISIKKSADKTFVILD 305 ++I EPGR+ VA L + + + D Sbjct: 267 SGVRVIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDYSAFLDEDESSEQTFMYYVND 326 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 F A+ + P D + I GP C+ D I + GD Sbjct: 327 GVYGSFNCILYDHAHVKPLLQKRPKPDEKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDW 386 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + E GAY + T+N V Sbjct: 387 MLFENMGAYTVAAASTFNGFQRPTIYYV 414 >gi|291412331|ref|XP_002722435.1| PREDICTED: ornithine decarboxylase 1-like [Oryctolagus cuniculus] Length = 461 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 86/377 (22%), Positives = 140/377 (37%), Gaps = 30/377 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + K +L + A YA+K N ++A+IKTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDVLKKHLRWLKALPR--VTPFYAVKCNDSRAIIKTLATIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP ERI+++ K + +I A SG+ +SE EL + + IA Sbjct: 98 VQGLGVPPERIIYANPCKQVSQIKYAASSGVQMMTFDSEVELMKVARAHPKARLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + + Sbjct: 207 TFVQALSDARCVFDMGAEVGFHMHLLDIGGGFPGSEDAKLKFEEITSVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEDEASERTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + A I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDEQYYPASIWGPTCDGLDRIVARCDLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLI 388 GAY + T+N Sbjct: 387 GAYTVAAASTFNGFQRP 403 >gi|238064162|ref|ZP_04608871.1| decarboxylase [Micromonospora sp. ATCC 39149] gi|237885973|gb|EEP74801.1| decarboxylase [Micromonospora sp. ATCC 39149] Length = 411 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 93/393 (23%), Positives = 159/393 (40%), Gaps = 18/393 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG- 77 ++LA TP Y Y + + A + YA+KAN + V L G G Sbjct: 5 DELAERFGTPLYVYDLDRVAEARSRLFAALP-SGFDLFYAVKANPHPDVAGALRD-GPGP 62 Query: 78 ---LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 +I S GEL ALAA A +++G GKT E+ +A+ G+ F+ ES ++L+ + Sbjct: 63 ACRAEISSTGELDAALAAGYAAGECLYTGPGKTDTELAVAIARGVRLFSAESPTDLRRIG 122 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 A G A R+N A I + +FG+ + + +L G ++ Sbjct: 123 AVAERYGAVAECLLRINC-TTAGAATGIRMMGRPSQFGLDLESLPALLPELRATRGARLV 181 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G S + F+ + +L L + + GG A ++ P Sbjct: 182 GAHFFTMSNAGDESNLVAEFEQVVELAAGLAVDSGLPLELLDLGGGFAAPYAVPGAPMVY 241 Query: 255 D--------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 L + ++ E GR+LVA G L+ V+++K+ +T+VI+D Sbjct: 242 PKLRTELERLLDLNLPRWRTGTPRLACESGRYLVAGCGTLLCGVVNVKRGRGQTYVIVDA 301 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 +N + + ++ A A +VGP+C GD + + ++ + GD++ Sbjct: 302 GINAIGGLSGLGRLLPMAVCLDGAD--ATERASLVGPLCTPGDLLGRDVQVPVLAAGDVV 359 Query: 367 YIEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQF 398 I GAYG S + SR E+ V + Sbjct: 360 RIPNVGAYGITASLLGFLSRPAPAEVTVRNGEV 392 >gi|114576061|ref|XP_001156995.1| PREDICTED: ornithine decarboxylase 1 isoform 4 [Pan troglodytes] gi|114576063|ref|XP_001157039.1| PREDICTED: ornithine decarboxylase isoform 5 [Pan troglodytes] gi|114576065|ref|XP_001157192.1| PREDICTED: ornithine decarboxylase 1 isoform 8 [Pan troglodytes] gi|114576067|ref|XP_001157249.1| PREDICTED: ornithine decarboxylase 1 isoform 9 [Pan troglodytes] gi|114576069|ref|XP_001157295.1| PREDICTED: ornithine decarboxylase 1 isoform 10 [Pan troglodytes] gi|114576071|ref|XP_001157362.1| PREDICTED: ornithine decarboxylase 1 isoform 11 [Pan troglodytes] gi|114576073|ref|XP_001157412.1| PREDICTED: ornithine decarboxylase 1 isoform 12 [Pan troglodytes] gi|114576075|ref|XP_001157463.1| PREDICTED: ornithine decarboxylase 1 isoform 13 [Pan troglodytes] gi|114576077|ref|XP_001157520.1| PREDICTED: ornithine decarboxylase isoform 14 [Pan troglodytes] gi|114576079|ref|XP_001157580.1| PREDICTED: ornithine decarboxylase 1 isoform 15 [Pan troglodytes] gi|114576081|ref|XP_515299.2| PREDICTED: ornithine decarboxylase 1 isoform 17 [Pan troglodytes] gi|114576083|ref|XP_001157701.1| PREDICTED: ornithine decarboxylase 1 isoform 16 [Pan troglodytes] Length = 461 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 84/382 (21%), Positives = 140/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPTIYYV 408 >gi|315125301|ref|YP_004067304.1| diaminopimelate decarboxylase [Pseudoalteromonas sp. SM9913] gi|315013814|gb|ADT67152.1| diaminopimelate decarboxylase [Pseudoalteromonas sp. SM9913] Length = 401 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 80/399 (20%), Positives = 161/399 (40%), Gaps = 11/399 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +++KLA + TPF+ Y ++ + + + YA+KAN +VI+ L + G Sbjct: 11 AIDKLATELDTPFFVYDLDSLNTHLTRLVA---QTEVKLWYAVKANPLSSVIQRLNNAGF 67 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S+GEL + LA + +ER++ +G K+ +I + G+ F ES ++++ LN++ Sbjct: 68 NFDVASKGELEQVLAQGINSERVLNTGPAKSPKQIKHFIARGVRTFVAESLNQVRWLNEQ 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A++ + + RV + + + S + G+ Sbjct: 128 AIAQQCQLQVLLRVQLRWPEG---DKNPLGGDSLTPFGLGCDEWQTLNTSDYCALNFDGL 184 Query: 197 DMHIGSQIDQIESFHKAF-KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + + + + + +++ L Q N++ +D+GGGLGI Y D S Sbjct: 185 HIFQWGNMLSSDKLAELWTQMITPLRQLAEDLNINLKVLDLGGGLGIPYTLDTPSLSWDA 244 Query: 256 YASL-IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 ++ +E GR+ V + G T V+ K + + VI+ +N +RP Sbjct: 245 LIEALAKIKCDAGVTELWMELGRYAVGECGHYATPVVERKLNYGQQQVIMSGGINHLLRP 304 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + + + GP+C D + ++ + D L + GAY Sbjct: 305 AVTSQDFPARLLR--DSNAANQAMSLYGPLCTALDCLGEHQLPSDLNEQDWLVFSQCGAY 362 Query: 375 GAVQSGTY-NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 G +S Y L E +++ +R + Sbjct: 363 GFTESMPYFLCHELAGEYVIDNGVLSCVRQAEDASHYLR 401 >gi|73979737|ref|XP_856636.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 7 [Canis familiaris] Length = 462 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 85/383 (22%), Positives = 143/383 (37%), Gaps = 31/383 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++ ++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAREL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPAD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVIS--------------IKKSADKTFVILDVAMNDFM 312 ++I EPGR+ VA L +I+ + S ++ + Sbjct: 267 SGVRVIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 326 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHAD--IVGPICETGDFIALNRKIALPRPGDLLYIEK 370 LYD H + + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKVPSEHNEKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFEN 386 Query: 371 TGAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 MGAYTVAAASTFNGFQRPTIYYV 409 >gi|291408922|ref|XP_002720724.1| PREDICTED: ornithine decarboxylase 1-like [Oryctolagus cuniculus] Length = 443 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 79/370 (21%), Positives = 134/370 (36%), Gaps = 22/370 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF + + + TF A G + Y++K N++ V++ LA LG+G D S+ E+ Sbjct: 66 PFMVADLDVLARRHQTFCQALPG--VLTFYSVKCNNSPWVLRVLAALGTGFDCASQVEME 123 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + L V RI+++ K+I I A + G+ +SE EL + Q + Sbjct: 124 QVLGLGVAPSRIIYANPCKSISHIQYAARHGVRLLTFDSEEELIKVAQHHPGARLVLRLW 183 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S KFG + L A L + GV H+GS Sbjct: 184 ----------TQDSQSIFPLSAKFGASLEACGHLLTSARDLGLA-VVGVSFHVGSSCQTP 232 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY--HSDHRPPSSSDYASLIHQYFG 265 S+ +A + + + R GH++ +D+GGG A A+L + Sbjct: 233 TSYAQAITHCQQVFEMGRGAGHDMSLLDLGGGFPGAEGSQPLFEELVKGIKAALAQTFPE 292 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIK---KSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++I EPGRF V +I+ K + + + + + ++ Sbjct: 293 GSGVEVIAEPGRFYAEPVFTAAVNIIAKKSVLEPGGRRKFVYYLNDGHYGSFRVFLREPA 352 Query: 323 INYI---VNPAGDRLHIHADIVGPICETGD-FIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + + GP C+ D ++ GD L GAY + Sbjct: 353 PRIPIVVKEFRSEPPLFPCTLYGPTCDAFDRLFVAELQLPELDVGDWLVFPSMGAYTSSM 412 Query: 379 SGTYNSRLLI 388 S T+N Sbjct: 413 SSTFNGFPPA 422 >gi|195551415|ref|XP_002076223.1| GD15360 [Drosophila simulans] gi|194201872|gb|EDX15448.1| GD15360 [Drosophila simulans] Length = 394 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 79/383 (20%), Positives = 158/383 (41%), Gaps = 24/383 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 E L++L +++E+ + + YA+K N + V++ LA Sbjct: 21 IEECDLQRLDQA----LNICDLSSVERKLRLWQKLLPRIKP--FYAVKCNDDPMVVRLLA 74 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 LG+G D S+ E++ L V ERI+F+ + + ++ A + + V++E E+ Sbjct: 75 QLGAGFDCASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHRVSNGTVDNEFEVYK 134 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L+ N + + K + DKFG + + +K Sbjct: 135 LHTHYP----------NSNLIVRFKSEAKEAQCPLGDKFGCDADVDAAALMLLAKSLELK 184 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++G H+GS ++E++ +A K ++L + G+++ +D+GGG + + Sbjct: 185 VTGTSFHVGSGCSELEAYDRAIKKAKNLFKFGALLGYDMDFLDIGGGFPGSDDGKFEKIA 244 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK-------TFVILD 305 + + ++F + + +II EPGRF VA LV K+ + ++ ++ + + D Sbjct: 245 E-SVNTSVQRHFPDERVQIIAEPGRFFVAAACTLVCKIHAKREIRNEAGKLDTVMYYLND 303 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 F + ++ A H+ + I GP C+ D I+ + + GDL Sbjct: 304 GVYGSFNCILYDHQVVTAEHYLDNAESLPHLKSLIWGPSCDALDKISEDLHLPNLNRGDL 363 Query: 366 LYIEKTGAYGAVQSGTYNSRLLI 388 L GAY + +N + Sbjct: 364 LGFRNMGAYTMPIASPFNGFEVP 386 >gi|289811717|ref|ZP_06542346.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 330 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 87/289 (30%), Positives = 133/289 (46%), Gaps = 21/289 (7%) Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + RVNP +K +TG + K GI + A+ K + I Sbjct: 47 HRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP-----AALAVMQKYRLKLVGIHMH 101 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 I + ++ + +Q+ G +++ I GGGL I YH P + Y L + Sbjct: 102 IGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGGLSIPYHEGEEPVDTRHYYGLWNAA 161 Query: 264 FGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 K+ +EPGR+LVA G+LVT+V S+K+ + FV++D ND MRP +Y Sbjct: 162 REQIARHLGHAVKLEIEPGRYLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMY 221 Query: 318 DAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGDLLY 367 +YH I + + + GP+CE+GD R + PGD L Sbjct: 222 GSYHRISALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLV 281 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + TGAYGA S YNSR L+PE++ + Q +IR R T +EL+ L+ + Sbjct: 282 LHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALEML 330 >gi|296224503|ref|XP_002758083.1| PREDICTED: ornithine decarboxylase [Callithrix jacchus] Length = 461 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 84/382 (21%), Positives = 141/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A M YA+K N ++A++ LA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VMPFYAVKCNDSRAIVNALAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAICRLSVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 207 TFVQAITDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 + +II EPGR+ VA L + + + D F Sbjct: 267 SEVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPTIYYV 408 >gi|195953881|ref|YP_002122171.1| Ornithine decarboxylase [Hydrogenobaculum sp. Y04AAS1] gi|195933493|gb|ACG58193.1| Ornithine decarboxylase [Hydrogenobaculum sp. Y04AAS1] Length = 400 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 89/378 (23%), Positives = 159/378 (42%), Gaps = 15/378 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + + V+TP + I++ ++ A + YA+KAN +Q ++ L LGSG Sbjct: 36 ILDVLKNVKTPTLVINLDRIKERFIELQEALKE--AKIYYAVKANDHQEILALLNDLGSG 93 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 ++ S EL + L V RI+ S K +D ID A +SGI F+++S E+ L + A Sbjct: 94 YEVASSWELEKVLRLGVDGSRIISSNPVKPLDFIDYAYKSGIKAFSIDSYKEIDKLKKIA 153 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + S +KFG+ + + YA V G+ Sbjct: 154 PRSRVYIRLIV----------PNEGSDWPLTNKFGVDVDTALDILEYAKYQGFV-PYGIT 202 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--D 255 H+GSQ + + ++ K +L ++ + +++GGG+ + Y + Sbjct: 203 FHVGSQCNNLRNWFIGIKKAWELWEKAIYKDIKLTMLNLGGGIPVNYQYESLSIRDIGSY 262 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +L+ +YF ++ +EPGR LV D G+LV+ VI + ++ + Sbjct: 263 IEALLQKYFLIKPMEVQIEPGRGLVGDAGVLVSSVIGKTTKYINGEESYWIYLDTGVFNG 322 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 L + I+Y + I G C++ D I+ + GD +YI TGAY Sbjct: 323 LAEVLGGISYPMYAEQKGEIKPYTIAGVSCDSMDIISNFTYLPEVDIGDRVYIMATGAYT 382 Query: 376 AVQSGTYNSRLLIPEIMV 393 V + +N + + V Sbjct: 383 TVYAANFNGFGIPETVFV 400 >gi|118580411|ref|YP_901661.1| diaminopimelate decarboxylase [Pelobacter propionicus DSM 2379] gi|118503121|gb|ABK99603.1| diaminopimelate decarboxylase [Pelobacter propionicus DSM 2379] Length = 439 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 99/427 (23%), Positives = 179/427 (41%), Gaps = 36/427 (8%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 V L +A TP Y + IE++ N + V YA+KANS++ V++ + G Sbjct: 16 VPL--IAQKWGTPVYLHDRAFIEQSCDQLLNMPNAFGLHVRYAMKANSDRTVLRVVTGKG 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---LQSGIYCFNVESESELKT 132 LD S E RA +A +P +R++ + + + + +NV S ++ + Sbjct: 74 LDLDCSSVDEAARAHSAGIPYDRMMLTTQEVPLGQEREELEGMIRNGLKYNVCSLTQYRL 133 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + A G I + TG + FG+ ++ I ++ A G++ Sbjct: 134 IADFAKQAGIDLSIRVHP-GASGGGESQTRDTGSEYSCFGVHLNDIPTVVEMARD-KGLR 191 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + V +HIGS K + + +RS + + GGGL +A + Sbjct: 192 FTQVHVHIGSGG----DPEKWRENIDRELGFVRSYFPDAGTVSFGGGLKVARMPGEKQAD 247 Query: 253 SSDYASLIHQYFGNLQCK------IILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 ++ + + + + +EPG F+VA+ G ++T+V+ K + + F+++D Sbjct: 248 INELGTYAAARLKEFKEQTGRALRMEIEPGTFVVANSGYIITRVMDKKLTNEMNFLLVDG 307 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHI----------HADIVGPICETGDFIALN-- 354 M RP LY + H I+ + R IVG CE+GD + L+ Sbjct: 308 GMELLSRPLLYGSEHPISIVGQDGTLRSSEYDSYSVGTATPYGIVGRCCESGDSVRLDNE 367 Query: 355 -----RKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIM-VNGSQFHIIRPRMTF 407 ++A GD + I TGAY S YNS P +M + ++ +IR R Sbjct: 368 GTIVPVQVAEAEIGDYVVIGGTGAYSESMSPENYNSHRKAPAVMKMKDAELVLIRKRQVR 427 Query: 408 QELIELD 414 ++L++ + Sbjct: 428 EQLVQNE 434 >gi|86749199|ref|YP_485695.1| Orn/DAP/Arg decarboxylase 2 [Rhodopseudomonas palustris HaA2] gi|86572227|gb|ABD06784.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris HaA2] Length = 428 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 99/394 (25%), Positives = 160/394 (40%), Gaps = 15/394 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 + LA TP + Y A+ A + +A+KAN VI+ A G Sbjct: 11 RVATLAARHGTPLFIYDAPAMRAAAARLQEALP-PGARLFFAVKANPAPDVIRLFAGEGL 69 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G ++ S GELR ALA V +RIVFSG KT E+ A+++ I+ ES +EL TL Sbjct: 70 GAEVASGGELRLALACGVAPDRIVFSGPAKTAPELRCAIEACIFAVQAESVAELDTLQAL 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 V+ G +A RVN ++ FG+ + + A A+ L ++I G+ Sbjct: 130 CVARGATVRVALRVNLGPGG---ERRGGWGGPSPFGMDTDALDEVTARAARLDRLRIVGL 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H SQ + A + ++Q ++ GGG G +++D P + Sbjct: 187 HNHQASQTLD-PAKLIARFDAFARVAASLGSRFDLQFVNFGGGFGAPFYADDAPLDLAPV 245 Query: 257 ASLIHQY---FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + FG+ + E GR+LV G V +V+ +K+S + +LD ++ + Sbjct: 246 RACFAALAGVFGDRPLQFAAESGRYLVGPAGCYVARVVDVKRSFGVRYALLDGGIHHVLG 305 Query: 314 PTLYDAYHEINY---IVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIE 369 + V +I GP+C D +A ++ GDLL Sbjct: 306 LSGTMRSLRRPVAVARVGARSGEPCEPTEIAGPLCTPIDRLAGAAELPCDLAAGDLLAFA 365 Query: 370 KTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIR 402 GAY S + E+M++G +I Sbjct: 366 NCGAYAKHASPLNFLGHDWPAELMIDG--ARVIV 397 >gi|23273123|gb|AAH33264.1| Odc1 protein [Mus musculus] Length = 456 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 86/382 (22%), Positives = 144/382 (37%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++ TLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPAER++++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + + Sbjct: 207 TFVQAVSDARCVFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAMNDF 311 +II EPGR+ VA L +I+ K + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPNIYYV 408 >gi|84385203|ref|ZP_00988235.1| putative diaminopimelate decarboxylase protein [Vibrio splendidus 12B01] gi|84379800|gb|EAP96651.1| putative diaminopimelate decarboxylase protein [Vibrio splendidus 12B01] Length = 400 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 87/368 (23%), Positives = 158/368 (42%), Gaps = 13/368 (3%) Query: 18 LEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 +++LA P Y Y A+E++ + + + YA KAN ++ +++TLA Sbjct: 15 IQQLAKQQTQPLCAYLYDLDALEQHIKQMRHVLPK-NVELFYAAKANPSEPILRTLAPYV 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S GEL + + ++F G GK + E++ A++ + +VES +EL+ + Sbjct: 74 DGFEAASGGELTHLHQQQLD-KPLIFGGPGKMLSELEQAIELDVDAIHVESLTELQRIGS 132 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 L + A I R+N DI T K++ G K FG+ ++ + Y P +K+ G Sbjct: 133 LTQKLNRPASIFLRMNIDIGDITLSKLAMGGKPTPFGLDESELSNALMYLRDFPLIKLKG 192 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGIAYHSDHRPPSSS 254 H+ S ++ + + ++ + + I++GGG+GI Y + + Sbjct: 193 FHFHLMSHQLDVDRHLALMQRYFQVVKEWKKTFSLDELIINLGGGMGINYQNPKQHFPWM 252 Query: 255 DYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ + K+ E GR++ A G V +V+ IK++ + FVI + F Sbjct: 253 EFCDKLEFLISKEHLQDWKLRFECGRYISAPCGYYVMEVLDIKQNLGENFVIARGGTHHF 312 Query: 312 MRPTLYDAYHEINYIVNPAGDR-----LHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 P H + N A +VG +C D +A N+ I GD + Sbjct: 313 RTPAAQGHDHPFAILKNKQQPTISNPIDQTTATLVGQLCTPKDVLARNQNIDHIDIGDYV 372 Query: 367 YIEKTGAY 374 GAY Sbjct: 373 VFTLAGAY 380 >gi|218962050|ref|YP_001741825.1| diaminopimelate decarboxylase (DAP decarboxylase) [Candidatus Cloacamonas acidaminovorans] gi|167730707|emb|CAO81619.1| diaminopimelate decarboxylase (DAP decarboxylase) [Candidatus Cloacamonas acidaminovorans] Length = 449 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 84/428 (19%), Positives = 153/428 (35%), Gaps = 30/428 (7%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKT 70 + V ++ L TP + +S I + Y + ++ K N A+ Sbjct: 33 IDGVPIKTLVQKYGTPLFVFSEKQIRRTYRRLLETIRIHYPKVDIVWSYKTNYLAAICNI 92 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 G+ ++VS E +A + +P RI F+G K ++ +A++ G Y ++ EL Sbjct: 93 FHQEGAPAEVVSRMEYEKARSNGIPGNRIYFNGPSKRKQDLQIAIKEGAYIH-IDHLEEL 151 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + A L K +A RVN D + F + + + Sbjct: 152 YQIENIAEELAIKPKVAIRVNMDTGISPMWTR------FGFNYENGEAYRTVQRLISGNK 205 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 V++ G+ HIG+ I +++ A L + Q ++ N + GG + ++ Sbjct: 206 VQLVGLHTHIGTFILDPNAYYWAATKLLNFAQTIKDNFGIVLDYIDMGGGFASNNTLIDQ 265 Query: 251 PSSSDY--------------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 + + A Y ++ILE GR L+ + G L+ V+ K Sbjct: 266 YTPGELASPSFEQYAEAIGTAFNASHYVKEYHPRLILETGRVLIDESGYLIASVLGKKNL 325 Query: 297 A-DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + VILD +N + Y + + GP+C D I Sbjct: 326 PTGERAVILDAGVNINITAWWYKQRVLPTKPF----PGTYQNTVFYGPLCMNIDVIRSAM 381 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG-SQFHIIRPRMTFQELIELD 414 GD + I GAY Q + ++N + +IR + +L + Sbjct: 382 PFPDLYYGDTVIISPVGAYNVTQWMQFIEY-RPNVCLINETGEVDVIRSQEDLSDLTSRE 440 Query: 415 SIPAWLQK 422 IP L++ Sbjct: 441 YIPDHLRQ 448 >gi|474030|emb|CAA47167.1| ornithine decarboxylase [Drosophila melanogaster] Length = 394 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 82/383 (21%), Positives = 157/383 (40%), Gaps = 24/383 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 E L++L +++E+N + + YA+K N + V++ LA Sbjct: 21 IEECDLQRLDQA----LNICDLSSVERNVRLWQKLLPRIKP--FYAVKCNDDPMVVRLLA 74 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 LG+G D S+ E++ L V ERI+F+ + + ++ A + + V++E E+ Sbjct: 75 QLGAGFDCASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYK 134 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L+ N + + K + DKFG + + +K Sbjct: 135 LHTHYP----------NSNLIVRFKSEAKEAQCPLGDKFGCDADVDAAALMLLAKSLELK 184 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++G H+GS +++++ +A K ++L + G+++ +D+GGG + Sbjct: 185 VTGTSFHVGSGCSELQAYDRAIKKAKNLFKFGALLGYDMDFLDIGGGFPGS-DDVKFEQI 243 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA------DKTFVILDV 306 + + + ++F + + II EPGRF VA LV K+ + ++ D L+ Sbjct: 244 AESVNTSVQRHFPDERVHIIAEPGRFFVAAACTLVCKIHAKREIRNEAGKLDTVMYYLND 303 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIALNRKIALPRPGDL 365 + LYD I + H+ + I GP C+ D I+ + + GDL Sbjct: 304 GVYGSFNCILYDHQVVIAEHYQDNAESLPHLKSLIWGPSCDALDQISEDLHLPNLNRGDL 363 Query: 366 LYIEKTGAYGAVQSGTYNSRLLI 388 L GAY + +N + Sbjct: 364 LGFRNMGAYTMPIASAFNGFEVP 386 >gi|6469279|emb|CAB61758.1| ornithine decarboxylase [Mucor circinelloides f. lusitanicus] Length = 433 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 73/385 (18%), Positives = 137/385 (35%), Gaps = 32/385 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + ++ + + ++ YA+K N + V++ LA LG G D S+ E+++ Sbjct: 60 FFVGDLGEVVRQHIRWKSLLPRIEP--FYAIKCNPDPMVVQLLASLGCGFDCASKQEIQQ 117 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ K I + Q + ++ EL + + I Sbjct: 118 VLDVGVDPSRIIYANPCKQASFIRYSAQQNVSRMTFDNAEELFKIKKYYPDAELVLRIL- 176 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T +S + KFG P+H + L A L + + GV H+GS Sbjct: 177 ---------TDDSMSLCQLGLKFGAPLHTVQHLLQLAKEL-NLNVIGVSFHVGSGCLDEN 226 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH-QYFGNL 267 +F A +++ Q ++ G++ + +DVGGG A + Sbjct: 227 AFGDAVVRAKNVFDQAKAMGYDFKFLDVGGGFPGADVKNGITFEKVAAVLGPIVDRLFPK 286 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 ++I EPGR+ VA L VI + + + Sbjct: 287 DVRVIAEPGRYYVASAFNLAVNVIGRRTNMAHQDQTDASPEYMYYVNDGMYGSVNCIIFD 346 Query: 328 NP-----------------AGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + + + GP C++ D + + ++ PGD LY E Sbjct: 347 HQVVHPKVLMKNELFAYGQDLPEAQYESSVWGPTCDSIDCLNKSARLPKLEPGDWLYFEN 406 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNG 395 GA+ + +N E++ Sbjct: 407 MGAHTICAASQFNGF-RKSEVLYTN 430 >gi|66813288|ref|XP_640823.1| group IV decarboxylase [Dictyostelium discoideum AX4] gi|74897175|sp|Q54UF3|DCOR_DICDI RecName: Full=Probable ornithine decarboxylase; Short=ODC gi|60468851|gb|EAL66851.1| group IV decarboxylase [Dictyostelium discoideum AX4] Length = 461 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 78/377 (20%), Positives = 132/377 (35%), Gaps = 29/377 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + + YA+K N V++ L LG+ D S E+ Sbjct: 87 FFVADVGVIIKQWQKWVKNLP--NVKPYYAVKCNPTVGVLRVLDALGTNYDCASRTEIES 144 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ K I + A + ++ SEL+ + + IA Sbjct: 145 VLNLGVDPSRIIYANPCKQISALKFARAHNVKLMTFDNLSELEKIEKFFPEAELVLRIAP 204 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S + KFG+ I + L A + +K+ GV H+GS + Sbjct: 205 D----------DSKSVMRFGSKFGVHIDDCNDLLEMAKEM-NLKVVGVSFHVGSGCQSGD 253 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 S+ A +++ + + + +DVGGG + + + Sbjct: 254 SYADALIMVKSVFDMAKKLNMELTLVDVGGGFTGSDDEKFNAFT--KVIREKTAELFSPN 311 Query: 269 CKIILEPGRFLVADVGILVTKVISIK-KSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 KII EPGR+ A L VIS + + N+ + Y A Sbjct: 312 VKIIAEPGRYFAAQSHTLAVTVISKRSIKQEDNRQHPRRTSNNMRQYNYYLADGVYGSFN 371 Query: 328 NPAGDRLHI-------------HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 N D + + GP C++ D + + +I + GD LY + GAY Sbjct: 372 NTKFDYAKVEPLLLKPSTKQPTPCTLFGPTCDSIDVVLKDTQIPELKIGDWLYFQDMGAY 431 Query: 375 GAVQSGTYNSRLLIPEI 391 S ++N P Sbjct: 432 TIASSSSFNGFCPPPVY 448 >gi|196009165|ref|XP_002114448.1| hypothetical protein TRIADDRAFT_27475 [Trichoplax adhaerens] gi|190583467|gb|EDV23538.1| hypothetical protein TRIADDRAFT_27475 [Trichoplax adhaerens] Length = 391 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 79/377 (20%), Positives = 138/377 (36%), Gaps = 29/377 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + I K + T+ + ++ YA+K N ++ V+ TL+ LG G D S E++ Sbjct: 17 PFYIVNVGNILKKHKTWLSLLPRVEP--FYAVKCNDDRNVLATLSALGIGFDCASMAEIK 74 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L VP +IV++ K + A + + ++E EL + Q + + Sbjct: 75 AVLKLGVPPSKIVYANPCKQASHLKFAAKREVSMMTFDNEPELHKVKQLHPTAKLILRLL 134 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + K+G P+ + +L A L + G+ H+GS Sbjct: 135 ----------TDDSKSLCRLGQKYGAPLKTVPNLLQVARNLDL-NVVGISFHVGSGCYDA 183 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFG 265 +F A ++ + +S G +D+GGG + + S + + Sbjct: 184 SAFSSAVEIAKTAFDYGKSMGFQFDILDIGGGFPGSPRATVSFEEISATLNKALNKHFPV 243 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 +II EPGR+ VA L VI+ ++ D + +Y + Sbjct: 244 ESGVRIIAEPGRYYVASAFNLAVNVIAKRQVNDDNTQAQGKQHAYRNQKYMYYVNDGVYG 303 Query: 326 IVNP--------------AGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 N + + I GP C+ D + + GD +Y E Sbjct: 304 SFNCLLYDHAIVYPKTLGRDNEQQYSSSIWGPTCDGLDCVMKECMLPELDVGDWMYFEDM 363 Query: 372 GAYGAVQSGTYNSRLLI 388 GAY A + +N Sbjct: 364 GAYTAAAASNFNGFQKP 380 >gi|289672832|ref|ZP_06493722.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae FF5] Length = 171 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 92/171 (53%), Positives = 116/171 (67%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M AF Y +G L AE V+L +A TP Y YS IE Y +++A GM MVC+A+K Sbjct: 1 MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ANSN V+ LA LG+G DIVS GEL R LAA AE+IVFSGVGKT +++ AL+ G++ Sbjct: 61 ANSNLGVLNVLARLGAGFDIVSRGELERVLAADGKAEKIVFSGVGKTREDMRRALEVGVH 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF 171 CFNVES EL+ L + A L +API+ RVNPD++A TH ISTG KE+KF Sbjct: 121 CFNVESTDELERLQEVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKF 171 >gi|39933947|ref|NP_946223.1| ornithine decarboxylase [Rhodopseudomonas palustris CGA009] gi|192289366|ref|YP_001989971.1| ornithine decarboxylase [Rhodopseudomonas palustris TIE-1] gi|39647794|emb|CAE26314.1| putative ornithine decarboxylase [Rhodopseudomonas palustris CGA009] gi|192283115|gb|ACE99495.1| Ornithine decarboxylase [Rhodopseudomonas palustris TIE-1] Length = 380 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 90/369 (24%), Positives = 151/369 (40%), Gaps = 20/369 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N++ F+ A D+ V YA+KAN V+ LA LGS D S E++ Sbjct: 21 PCLVVDLEVVRDNFMHFAKALP--DSRVFYAIKANPAPEVLSLLASLGSCFDCASVQEIQ 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +RI F K +I A + GI F+V+ E++ + + A I Sbjct: 79 MALAAGATPDRISFGNTIKKERDIARAYELGIRLFSVDCTPEVEKVARAAPGSKVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 139 YDCAGA----------EWPLSRKFGCDPEMAVDVLDNAKRLG-LEAYGISFHVGSQQRKV 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A + + + G ++ +++GGG Y + P + ++FG Sbjct: 188 KAWDRALAMAAQVFRDCAERGISLSMVNMGGGFPTKYLKEVPPVVQYGRSIFRALRKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ T+V+ I K +D+ V I Y Sbjct: 248 NQIPETIIEPGRGMVGNAGVIETEVVLISKKSDEDDVRWVYLDIGKFGGLAETMDESIRY 307 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + + GP C++ D + LP GD L IE TGAY + S Sbjct: 308 AIKSRHDGAEMTPCVLAGPTCDSADVLYEKMPYPLPVTLEIGDKLLIEGTGAYTSTYSSV 367 Query: 382 -YNSRLLIP 389 +N + Sbjct: 368 AFNGFPPLA 376 >gi|92118880|ref|YP_578609.1| ornithine decarboxylase [Nitrobacter hamburgensis X14] gi|91801774|gb|ABE64149.1| ornithine decarboxylase [Nitrobacter hamburgensis X14] Length = 380 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 90/367 (24%), Positives = 148/367 (40%), Gaps = 20/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY TF+ A D+ V YA+KAN V+ LA LGS D + E+ Sbjct: 21 PCLVVDLDVVRDNYQTFAKALP--DSRVFYAVKANPAPEVLSLLASLGSCFDTATVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +R+ F K +I A GI F V+ +E++ + + A I Sbjct: 79 MALAAGATPDRVSFGNTIKKERDIARAYALGIRLFAVDCTAEVEKIARAAPGAKVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 139 YDCAGA----------EWPLSRKFGCDPEMAVDVLDLAKRLS-LEPVGISFHVGSQQRKV 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A ++ + + G N+ +++GGG Y D P + ++FG Sbjct: 188 KAWDRALAMVSQVFRDCAERGINLTMVNMGGGFPTKYLRDVPPVVQYGRSIFRALRKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ T+V+ I + +D I Y Sbjct: 248 NQIPETIIEPGRGMVGNAGVIETEVVLISRKSDDDENRWVYLDIGKFSGLAETMDESIRY 307 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + + GP C++ D + + LP GD L IE TGAY + S Sbjct: 308 AIRTPHDGAEMTPCVLAGPTCDSADVLYEKQPYPLPVTLEIGDKLLIEGTGAYTSTYSSV 367 Query: 382 -YNSRLL 387 +N Sbjct: 368 AFNGIPP 374 >gi|109103106|ref|XP_001084503.1| PREDICTED: ornithine decarboxylase isoform 2 [Macaca mulatta] Length = 461 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 82/382 (21%), Positives = 138/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + NA YA+K N ++A++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLNALPR--VTPFYAVKCNDSKAIMKTLAAVGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + + A +G+ +SE EL + + IA Sbjct: 98 VQSLRVPPERIIYANPCKQVSQTKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + KF + L A + + + GV H GS E Sbjct: 157 ---------TDDSKAVCCLSVKFRATLRNSRLLLERAKEV-NIDVVGVSFHAGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 207 TFVQAISDTRCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITSIINPALDRYFLSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II +PGR+ VA L + + F Sbjct: 267 SGVRIIAKPGRYYVASAFTLAVNIISKKIVLKEQTGSDDEDESSEQTFMCYVNYGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D+ + + I GPIC+ D I + GD + E Sbjct: 327 NCILYDHAHVKPLLQKRPKPDKKYYSSSIWGPICDGLDRIVERCDLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPVIYYV 408 >gi|195121526|ref|XP_002005271.1| GI20395 [Drosophila mojavensis] gi|193910339|gb|EDW09206.1| GI20395 [Drosophila mojavensis] Length = 392 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 83/397 (20%), Positives = 160/397 (40%), Gaps = 22/397 (5%) Query: 1 MS--AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA 58 M +++ L V E + +E+ + + + YA Sbjct: 1 MDTQGINFYDKELDIGRVVAEAQLEDCDEALNICDLSTVERKFELWQKQLPRITP--FYA 58 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +K N ++ +++TLA LG G D S+ EL++ L V +RI+F+ + I +D A Q Sbjct: 59 VKCNDDKRIVQTLADLGVGFDCASKNELKQVLDYGVSPDRIIFANPCRPISHLDYAKQQK 118 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++E E+ L++ N + + K + DKFG Sbjct: 119 VLKGTVDNEFEIYKLHKHYP----------NSNLIVRFKSEAKAAQCPLGDKFGCDADID 168 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 S + + ++G H+GS +E++ +A + ++L + + G+++ +D+GG Sbjct: 169 ASALMLLAKSLDLTVTGTSFHVGSGCSDMEAYERAIRKAKNLFKFGQLLGYDLDLLDIGG 228 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 G + + S + +YF + + +II EPGRF VA LV K+ + ++ + Sbjct: 229 GFPGSDDEHFIKLAG-TVNSAVQKYFPDERIQIIAEPGRFFVAASYTLVCKIHAKREVRN 287 Query: 299 K-------TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 + + D F + + + + I GP C+ D I Sbjct: 288 SAGKLDTVMYYLNDGVYGSFNCILYDHQTVTVEHYLPADPLLPTFKSLIWGPSCDALDKI 347 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + + ++ + GDLL GAY + +N L Sbjct: 348 SEDLRLPYLKRGDLLGFPNMGAYTVPIASAFNGFPLP 384 >gi|126330479|ref|XP_001381469.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 510 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 77/368 (20%), Positives = 132/368 (35%), Gaps = 21/368 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F + + + TF +A+K N++ +V++ LA+LG+G D S GEL + Sbjct: 29 FMVADLGVLAEQHKTFQQMLPR--VTPFFAVKCNNSSSVLRVLANLGTGFDCASRGELEQ 86 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L + RI+++ K I + A G+ + E E+ + + + + Sbjct: 87 VLRMGIAPTRIIYANTCKQISHLQYAASHGVQLMTFDCEEEIAKIAKFHPTARLVLRLW- 145 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG P+ Q L A L + + G H+GS + Sbjct: 146 ---------TQDSESLFPLSTKFGAPLDQCGHLLTLAKDLGVI-VVGACFHVGSGCQTPQ 195 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 SF+KA R + GH + +D+GGG + + ++ + Sbjct: 196 SFNKAIADARHVFDLGLQIGHPMSLLDIGGGFPGKKNFVPTFEEMAAVINIALDQYFPEG 255 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADK-----TFVILDVAMNDFMRPTLYDAYH 321 +II EPGRF V +I K ++ + + D F Sbjct: 256 SGVEIIAEPGRFYGTKVCTSALNIIGKKDVVEQGGRKLMYYLNDGFYTSFAAIRREKETR 315 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIA-LNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + + L + + GP C+ D + + + GD L E GAY S Sbjct: 316 IPHVVKKFNCKPLLYPSTLWGPTCDAFDRLGPTDVLLPELHVGDWLIFEDMGAYTYTISS 375 Query: 381 TYNSRLLI 388 +N Sbjct: 376 NFNGFSRP 383 >gi|19115577|ref|NP_594665.1| ornithine decarboxylase Spe1 [Schizosaccharomyces pombe 972h-] gi|13124099|sp|Q9UQW9|DCOR_SCHPO RecName: Full=Ornithine decarboxylase; Short=ODC gi|5262753|emb|CAB45689.1| ornithine decarboxylase [Schizosaccharomyces pombe] gi|6138895|emb|CAB59684.1| ornithine decarboxylase Spe1 [Schizosaccharomyces pombe] Length = 432 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 83/379 (21%), Positives = 139/379 (36%), Gaps = 29/379 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + L + YA+K N + V+ L G+G D S+GEL + Sbjct: 69 FFVADLNGVYRQLLRWHAKLPR--VQPFYAVKCNPDPKVLALLNKFGTGFDCASKGELEQ 126 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V +RIV++ K I + A GI ++ EL + Q + I Sbjct: 127 ILGLGVSPDRIVYANPCKAITYVRYAASKGINLMTFDNADELYKVKQHHPNSRLLLRI-- 184 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +T S + KFG + L A +L + + GV H+GS Sbjct: 185 --------STDDSNSLCRLSLKFGASLDDTGKLLDIAKSLE-LNVVGVSFHVGSGSYDPS 235 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F A + R + Q G N +D+GGG S + + Sbjct: 236 AFLDAIQRSRQVFDQGLERGFNFDLLDIGGGFMNDSFDGVADLIRSAL-----DTYFDPS 290 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT--FVILDVAMNDFMRPTLYDAYHEINYI 326 ++I EPGRF V+ L VI+ +K D+ ++ + + L+D H + + Sbjct: 291 IRVISEPGRFFVSSSFTLAVNVIAKRKLDDEEKVMYYVNDGVYGSLNCILFDHQHPVARV 350 Query: 327 VNPAG--------DRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAV 377 + I GP C++ D IA + + GD +Y E GAY Sbjct: 351 LKCGSRFVYNDLVGTGQHRCFIWGPTCDSLDVIANDAHLPYELNVGDWIYFEDAGAYTVA 410 Query: 378 QSGTYNSRLLIPEIMVNGS 396 + +N + ++ Sbjct: 411 AASCFNGFKTSRIVYLDTD 429 >gi|114778627|ref|ZP_01453443.1| probable diaminopimelate decarboxylase protein [Mariprofundus ferrooxydans PV-1] gi|114551092|gb|EAU53653.1| probable diaminopimelate decarboxylase protein [Mariprofundus ferrooxydans PV-1] Length = 386 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 95/379 (25%), Positives = 154/379 (40%), Gaps = 16/379 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELR 87 Y Y TT + + + V YA+KAN + A ++ G+ G++I S GE Sbjct: 10 CYVYDTTPMREKIAHLNQIMP-AGVEVFYAMKANPHPAFLQAAREAGAKGIEIASLGEAE 68 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 +A+ A PA +++++G GK+ +E+ + GI ++ES +E L LGK I Sbjct: 69 KAVTAGFPAGQLIYTGPGKSSEELRWGVAHGIRTIHIESLTEAHRLQAICTELGKNQDIL 128 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+N D + + + + KFGI ++ L ++ G+ ++ S + + Sbjct: 129 LRINADFDIHE-AQTTFSGGSKKFGIDEEKLADFLPQILALDHLRFRGLHVYAASGVLNV 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGH--NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 K +L+ + + + +N ID GGG G+ Y + YA + Sbjct: 188 GDLLKNCELVFGMARNIEANHPGTCCDTIDFGGGFGVDYLEEGHDFDPQAYADGLAALIE 247 Query: 266 NLQC---KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 LE GR+L AD G T+V+ IK S K VI +N F RP H Sbjct: 248 QYGFGERTFFLELGRYLAADSGWFCTEVLDIKDSRGKKQVICAGGINHFRRPAALAINHP 307 Query: 323 INYIVNPAGD-------RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + I GP+C D +A N + GD+ GAYG Sbjct: 308 MAIIPMHREKLFPAQEQVRDEAVYFGGPLCTGADKLANNVLMNAVDVGDIAVFGLAGAYG 367 Query: 376 AVQSG-TYNSRLLIPEIMV 393 S + S EI++ Sbjct: 368 LTMSNLEFLSHERPQEIIL 386 >gi|238060809|ref|ZP_04605518.1| orn/DAP/Arg decarboxylase 2 [Micromonospora sp. ATCC 39149] gi|237882620|gb|EEP71448.1| orn/DAP/Arg decarboxylase 2 [Micromonospora sp. ATCC 39149] Length = 422 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 89/391 (22%), Positives = 164/391 (41%), Gaps = 13/391 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E L +P Y Y I++ + A + + Y++KAN + + + L G L Sbjct: 7 EALVTAYGSPLYVYDLDRIDQAHADLRAALP-TPSTLLYSMKANPHPVIARRLRLAGCRL 65 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 ++ S GEL AL A ++++G KT E++ A+ +G+ F+VES SEL+ L + A Sbjct: 66 EVSSAGELAAALLAGAGGGDLLYTGPAKTPAELEEAVAAGVRAFSVESFSELQRLGRAAA 125 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 RVN A TG +FGI + + ++ V+++G+ + Sbjct: 126 GQDADLTALLRVNGPGAAGGSGLRMTGTAS-QFGIDAGTLATEWSPDRVPDRVRVTGLHL 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + + D + R + +D+GGG Y + P Sbjct: 185 FPITNARGEDQLLDELRAAVDTAAELARVCRLDPAVVDLGGGFSAPYAAPGSRPVYQRLR 244 Query: 258 SLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + + + +++ E GR+LVA+ G L+T V+ +K + +T+ +LD +N Sbjct: 245 AEAETRLDAAFPGWRAGRPEVMFESGRYLVAECGTLLTTVVDVKHTRGRTYAVLDAGINV 304 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLH--IHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 T + + + + D+ GP C D + + + R G +L I Sbjct: 305 LGGMTGLGRLLPMRALPVGSAETASDVTRVDLAGPSCTPLDVLGRDVPLPEARSGTVLAI 364 Query: 369 EKTGAYGAVQSGT-YNSRLLIPEIMVNGSQF 398 GAYG S + SR + E++++G + Sbjct: 365 PNVGAYGLSASLVGFLSRPMPAEVLLSGGRV 395 >gi|328876086|gb|EGG24450.1| group IV decarboxylase [Dictyostelium fasciculatum] Length = 466 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 88/420 (20%), Positives = 149/420 (35%), Gaps = 37/420 (8%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMV--CYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TPF+ Y+ I +N +F T +A+KA N ++ L G G+D S Sbjct: 36 TPFHLYNGDMIAENARHMIKSFRNHFTHYTNYFAVKATPNPHLLDLLKQQGMGVDCSSFA 95 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 EL + + I+F+ E LA + G N++ +++ + Q Sbjct: 96 ELILSQKVGFKGDEIMFTSNNTPDKEYQLAYELGAV-INLDDITQIDAMKQALGGEKMPR 154 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 ++ R NP I +E KFG+ Q+ YA L + M +++ Sbjct: 155 MVSLRYNPG-PLKQGNAIIGEPQEAKFGLTAAQLPEAYAKLKALGVDRFGLHCMVASNEL 213 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 A L + + RS + I++GGG+GI Y +P A I Sbjct: 214 QLDYFEETAKLLFNTVAELSRSPMSLTFEMINLGGGIGIPYRPGQKPVDFVQLAQRIANQ 273 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY---DAY 320 + N+ ++ + +++ A++ + + ++ A++ Y DA Sbjct: 274 YNNIILPLLSDQQQYVNANIKEIKIVTECGRVVTGPYGCLITKAIHHKSTYKQYVGVDAC 333 Query: 321 HEINYIVNPAGDRLHIH---------------------ADIVGPICETGDFIALNRKIAL 359 G HI DIVG +CE D A+NR + Sbjct: 334 MVNLMRPGMYGAYHHITVLKQNNQNNQNNQNNQNNNNLYDIVGSLCENNDKFAVNRSLPN 393 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV--------NGSQFHIIRPRMTFQELI 411 GD+L I +GA+G YN + E + F IR T +L Sbjct: 394 IEKGDILVIHDSGAHGHSMGFNYNGKTRSAEYLFTTTNNNNNETKTFTCIRRGETLDDLF 453 >gi|75277325|sp|O22616|DCOR_SOLLC RecName: Full=Ornithine decarboxylase; Short=ODC; AltName: Full=LeODC gi|3668354|gb|AAC61845.1| ornithine decarboxylase [Solanum lycopersicum] gi|10937976|gb|AAB82301.2| ornithine decarboxylase [Solanum lycopersicum] Length = 431 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 74/373 (19%), Positives = 131/373 (35%), Gaps = 23/373 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + +++A + YA+K N + + L+ +GS D S E+ Sbjct: 64 PFYVLDLGEVVSLMEQWNSALP--NIRPFYAVKCNPEPSFLSMLSAMGSNFDCASRAEIE 121 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + +RIVF+ K +I A + G+ +SE E+ + + + Sbjct: 122 YVLSHGISPDRIVFANPCKPESDIIFAEKIGVNLTTYDSEDEVYKIRKHHPKCEL--LLR 179 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + D NA K+G +I L A + +SGV HIGS Sbjct: 180 IKPMTDGNA-------RCPMGPKYGALPEEIEPLLRTAQ-AARLTVSGVSFHIGSGDADS 231 Query: 208 ESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ A + + + + +D+GGG + P+ +L + Sbjct: 232 NAYLGAIAAAKQVFETAAQLGMPKMTVLDIGGGFTSGHQFTTAAPAVKS--ALETHFHDF 289 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY------ 320 + II EPGRF L T +I + + ++ + M LYD Sbjct: 290 PELTIIAEPGRFFAETAFTLATTIIGKRVRGELKEYWINDGLYGSMNCVLYDHATVTATP 349 Query: 321 --HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 N G + + GP C+ D + + ++ + D L GAY Sbjct: 350 LACMSNRNNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAA 409 Query: 379 SGTYNSRLLIPEI 391 +N + Sbjct: 410 GSNFNGFNTSAIV 422 >gi|195474572|ref|XP_002089565.1| GE19168 [Drosophila yakuba] gi|194175666|gb|EDW89277.1| GE19168 [Drosophila yakuba] Length = 394 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 79/383 (20%), Positives = 155/383 (40%), Gaps = 24/383 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 E L+ L +++E+ + + YA+K N + V++ LA Sbjct: 21 IEECDLQHLDQA----LNICDLSSVERKLRLWQRLLPRIKP--FYAVKCNDDPVVVRLLA 74 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 LG+G D S+ E++ L V ERI+F+ + + ++ A + + V++E E+ Sbjct: 75 ELGAGFDCASKNEVKLVLGFGVQPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYK 134 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L+ N + + K + DKFG + + +K Sbjct: 135 LHTHYP----------NSNLIVRFKSEAKEAQCPLGDKFGCDADVDAAALMLLAKSLDLK 184 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++G H+GS ++E++ +A K ++L + G+++ +D+GGG + + Sbjct: 185 VTGTSFHVGSGCSELEAYDRAIKKAKNLFKFGALLGYDMDLLDIGGGFPGSDDGKFEKIA 244 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK-------TFVILD 305 + + ++F N + II EPGRF VA LV K+ + ++ ++ + + D Sbjct: 245 E-SVNTSVQRHFPNERVHIIAEPGRFFVAAACTLVCKIHAKREIRNEAGKLDTVMYYLND 303 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 F + ++ A + + I GP C+ D I+ + + GDL Sbjct: 304 GVYGSFNCILYDHQVVTAEHYLDNADSLPQLKSLIWGPSCDALDKISEDLHLPNLNRGDL 363 Query: 366 LYIEKTGAYGAVQSGTYNSRLLI 388 L GAY + +N + Sbjct: 364 LGFRNMGAYTMPIASAFNGFEVP 386 >gi|307253176|ref|ZP_07535054.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859361|gb|EFM91396.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 236 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 101/236 (42%), Positives = 147/236 (62%), Gaps = 2/236 (0%) Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +Y A TLP VKI+G+D HIGSQ+ +++ F A L L +QL+ +G + H+D+GGGL Sbjct: 1 MYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGL 60 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ Y+ + P + +L+ + G +IILEPGR + A+ GILVTKV +K + D+ Sbjct: 61 GVPYNGEEPPHPTEYAKALLEKLKGYADLEIILEPGRAITANAGILVTKVEYLKANEDRN 120 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 F I+D MND +RP LY+AY V+ + R D+VGPICET DF+ +R++A Sbjct: 121 FAIVDTGMNDMIRPALYEAYM-QITEVDQSLSREKAVYDVVGPICETSDFLGKDRELA-I 178 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 GDL+ + GAYGA S TYNSR EIMV+G Q ++I+ R +F +L L+ + Sbjct: 179 EQGDLIAMRSAGAYGAAMSSTYNSRPQAVEIMVDGDQAYLIKARASFADLWRLEKL 234 >gi|332376635|gb|AEE63457.1| unknown [Dendroctonus ponderosae] Length = 462 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 87/426 (20%), Positives = 160/426 (37%), Gaps = 35/426 (8%) Query: 18 LEKLAHVVQ--TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 ++++ V FY + ++I + + + ++ YA+K N++ AV++ LA LG Sbjct: 23 VQQICQQVGQENAFYVCNLSSILEKHKGWQAVMPRVEP--HYAVKCNNDLAVLEILATLG 80 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 + D S E+R+ L+ V +RI+F+ K I A G+ + EL + Sbjct: 81 ACFDCASRAEIRKVLSLGVSPDRIIFANPAKISSHIRYAADVGVATMTFDDVCELHKIQN 140 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 S I KFG + L A +L + + G Sbjct: 141 LYPSARLVIRIRVDATDA----------QCPLGMKFGCEPNDAPQLLDVARSL-NLNVVG 189 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V H+GS + F +A RD+ + G +D+GGG S ++ Sbjct: 190 VSFHVGSGCREPAVFRRAISAARDVFDYASTVGFKFSLLDIGGGYPGVRGSSLTDIAA-V 248 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILD 305 + + +F ++ ++I EPGR+ V L + S++K D ++ Sbjct: 249 VNNALEDFFRDMDVRVIAEPGRYYVTSAFTLACNIHSVRKITDVDDQGRRFETHRMYYIN 308 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 + LYD + + I + + GP C+ D + + + GD Sbjct: 309 DGVYGSFNCVLYDHQVVCPVPLKEYPESRRISSSVWGPTCDGLDRVIEDISLPDMNIGDW 368 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRM--TFQELIELDSIPAWLQKT 423 + E GAY + T+N +PE+ +II+ + I L + + Sbjct: 369 MVFEDMGAYTLPVASTFNGFP-VPEVC------YIIKQHEWAQLKNFISLSRAELEVIEE 421 Query: 424 PKQSSE 429 P + E Sbjct: 422 PNAADE 427 >gi|302542491|ref|ZP_07294833.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein [Streptomyces hygroscopicus ATCC 53653] gi|302460109|gb|EFL23202.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein [Streptomyces himastatinicus ATCC 53653] Length = 414 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 103/394 (26%), Positives = 164/394 (41%), Gaps = 17/394 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 LE+LA TP Y Y I+ V YA KAN + +++ L G G Sbjct: 7 LEELAGRYGTPLYVYDLDRIDAARRDLFGWLPE-GVEVYYAFKANPHVDLVRALRE-GDG 64 Query: 78 ----LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 +I S GEL AL I+++G GKT E+ A+ G+ F+ ES +L+ + Sbjct: 65 PACKAEISSTGELAAALDGGYTGADILYTGPGKTPGELREAIARGVRTFSAESPGDLEHI 124 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 Q AV G A RVN A+ I K +FGI + L ++PG I Sbjct: 125 GQAAVVHGVVADCLLRVNSAT-ASASTGIRMTGKPTQFGIDSETVAELAPRLRSVPGTSI 183 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIAYHSDHRPPS 252 +G+ + S ++ + F+ ++ Q+ G ++ +D+GGG + Y + Sbjct: 184 AGLHLFSQSNAKDEDALIEEFRHTIEVAAQVEADLGVALRLLDIGGGFSVPYGRHGARDA 243 Query: 253 SSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + + +E GR+LV D G L+ V ++K S D+ FVILD Sbjct: 244 YPKLRGELEAALDLRFPRWRRGELRIAVESGRYLVGDSGTLLASVSNVKTSRDRRFVILD 303 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 +N F + ++ + + + GP+C GD +A + GD+ Sbjct: 304 AGINTFGGMSGLGRILPVSIRIEGDAEV-TGKGTLAGPLCTPGDLLAREIDLPELDEGDV 362 Query: 366 LYIEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQF 398 + I TGAYG S + R E +V G + Sbjct: 363 IAIPNTGAYGPTASLLMFLGRPAPAEAVVRGGEV 396 >gi|156543044|ref|XP_001604390.1| PREDICTED: similar to ornithine decarboxylase [Nasonia vitripennis] Length = 400 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 82/369 (22%), Positives = 130/369 (35%), Gaps = 23/369 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I + + + +D YA+K N + V++ LA LG G D S+ E+ + Sbjct: 36 FYVLDVGDIVQKHQIWKEKLPRVDP--FYAVKCNDSLTVLEVLASLGVGFDCASKNEINK 93 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V + RI+F+ K I A G+ V++ESEL + + + I Sbjct: 94 VLDIGVDSSRIIFANPAKPASHIRHAAAVGVDLMTVDNESELHKIKKLFPTAKVVLRIRC 153 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + KFG + L + + G+ H+GS Sbjct: 154 DSEVA----------QCQLGMKFGCDPTFEAPSLLRLARLLDIDVVGISFHVGSGCQDPP 203 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 F++A ++L G +D+GGG S + + +YF Sbjct: 204 VFNRAICHAKNLFDLAVDIGFKPYLLDLGGGYPGNKGSSIEKIAD-VINHALDEYFPTDD 262 Query: 269 CKIILEPGRFLVADVG------ILVTKVISIKKSAD---KTFVILDVAMNDFMRPTLYDA 319 II EPGRF VA V + S T ++ + LYD Sbjct: 263 VHIIAEPGRFYVASAFTLATAIHSKRSVRADGNSPGNVTHTMYYINDGVYGSFNCLLYDH 322 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 H + G I + I GP C+ D + N + GD + E GAY + Sbjct: 323 QHVTPIPLR-PGHGKMIPSSIWGPTCDGLDQVVENVLMHEMELGDWIIFENMGAYTLPVA 381 Query: 380 GTYNSRLLI 388 +N + Sbjct: 382 SPFNGFPIP 390 >gi|145628394|ref|ZP_01784195.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.1-21] gi|144980169|gb|EDJ89828.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.1-21] Length = 220 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 89/220 (40%), Positives = 128/220 (58%), Gaps = 2/220 (0%) Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 +D HIGSQ+ +++ F A L L +QL+ +G ++H+D+GGGLG+ Y + P S Sbjct: 1 MDCHIGSQLTELQPFLDAADRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDY 60 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +L+ + + +IILEPGR + A+ GILV KV +K + + F I D MND +RP Sbjct: 61 ANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPA 120 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LY+AY I I R D+VGP+CET DF+ R+++ GD + GAYG Sbjct: 121 LYEAYMNIIEIDRTLA-REKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYG 178 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 A S YNSR E++V+G Q ++IR R T QEL L+S Sbjct: 179 ASMSSNYNSRPRTAEVLVDGDQSYLIRRRETLQELWVLES 218 >gi|221130673|ref|XP_002157770.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 444 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 83/373 (22%), Positives = 138/373 (36%), Gaps = 22/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + + Y F +A+K N + +I LA+LG D S+GE++ Sbjct: 45 PFYICNLDDVVRKYWKFQEHLPQ--VQPFFAVKCNPDPVIIALLAYLGVNFDCASKGEIK 102 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L V ERI+F+ K I A + + ++E+EL + Q + Sbjct: 103 AVLDLGVDPERIIFANPCKQNSFIKYANEKNVKKMTFDNEAELYKIKQHFPDAELVIRLK 162 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 S+ + KFG + L A L + GV H+GS Sbjct: 163 VD----------DSKSSCQFGIKFGATLESAEKLLNIAKELGL-NVIGVSFHVGSGCYDA 211 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS--LIHQYFG 265 ++ A KL + +Q + G N +D+GGG ++ + + + Sbjct: 212 SLYYDAVKLSATVFEQAENLGFNFTLLDIGGGFPGVEGGKISFELTASQLNLGIEKFFPP 271 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKT------FVILDVAMNDFMRPTLYDA 319 +II EPGR+ VA L V SI++ + L+ + L+D Sbjct: 272 ERNVRIIAEPGRYFVASAFTLTCNVTSIREVSTNKNSPPGFMYYLNDGVYGSFNCILFDH 331 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 ++ + GP C++ D I+ + + GD LY E GAY S Sbjct: 332 QSPTPLTLHETDHCPRYKCSLWGPTCDSMDCISKDSYLPKLMIGDWLYFENMGAYTIAPS 391 Query: 380 GTYNSRLLIPEIM 392 +N P + Sbjct: 392 IKFNGF-KPPVVF 403 >gi|330892355|gb|EGH25016.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. mori str. 301020] Length = 376 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 90/378 (23%), Positives = 148/378 (39%), Gaps = 18/378 (4%) Query: 47 AFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVG 105 AF G+ + +A+KA N +++ L G G+D S EL + I+F+ Sbjct: 1 AFAGVKNFKNFFAVKATPNPRIMQILKEEGMGMDCSSAAELELCERLGIRGRDIMFTSNN 60 Query: 106 KTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 +E + G + E T + + N +I Sbjct: 61 TPDEEFVKSCSMGAILNIDD--YEHITRLDVLEIKPELVSFRYLPNSSGEERQGNQIIGS 118 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 KE KFGI +I +A + M ++ + A + + Sbjct: 119 PKESKFGITDDRIFHCFAAMKKRNVKRFGLHTMLASNERNAAFFIETARIMFDLAKRISE 178 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC-------KIILEPGRF 278 +I+ I++GGGLGI H S + + + I +E GR+ Sbjct: 179 HLSIDIEFINLGGGLGIPQHPTDSEIDIDLVGSEVGRLYTQYFHSEDGITPDIYMENGRY 238 Query: 279 LVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 + G+L+TKV + S K FV +D +M DFMRP LY YH + + + I Sbjct: 239 ITGPAGVLLTKVRHVT-SKHKRFVGVDASMADFMRPALYKDYHHVTVL---NDSKELIKC 294 Query: 339 DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQ 397 D+ G +CE D A++R++ DLL I TGA+G +YN + PE+++ + Sbjct: 295 DVTGSLCENNDKFAIDRELPRCSRDDLLIIHDTGAHGYSMGFSYNGKTKSPEVLMRSKGE 354 Query: 398 F---HIIRPRMTFQELIE 412 +IR R +L Sbjct: 355 HFELELIRRREQTSDLFA 372 >gi|73979733|ref|XP_856558.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 5 [Canis familiaris] Length = 457 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 85/378 (22%), Positives = 139/378 (36%), Gaps = 26/378 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++ ++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAREL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPAD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++I EPGR+ VA L +I+ K + D + Y Sbjct: 267 SGVRVIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 326 Query: 327 VNPAGDRLHIH-----------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 D H+ I GP C+ D I + GD + E GAY Sbjct: 327 NCILYDHAHVKPLLQKVPSEHSISIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYT 386 Query: 376 AVQSGTYNSRLLIPEIMV 393 + T+N V Sbjct: 387 VAAASTFNGFQRPTIYYV 404 >gi|24586472|ref|NP_477052.2| ornithine decarboxylase 1 [Drosophila melanogaster] gi|62512165|sp|P40807|DCOR1_DROME RecName: Full=Ornithine decarboxylase 1; Short=ODC gi|7304113|gb|AAF59150.1| ornithine decarboxylase 1 [Drosophila melanogaster] gi|20151407|gb|AAM11063.1| GH13851p [Drosophila melanogaster] gi|220945166|gb|ACL85126.1| Odc1-PA [synthetic construct] gi|220954986|gb|ACL90036.1| Odc1-PA [synthetic construct] Length = 394 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 78/383 (20%), Positives = 157/383 (40%), Gaps = 24/383 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 E L++L +++E+ + + YA+K N + V++ LA Sbjct: 21 IEECDLQRLDQA----LNICDLSSVERKLRLWQKLLPRIKP--FYAVKCNDDPMVVRLLA 74 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 LG+G D S+ E++ L V ERI+F+ + + ++ A + + V++E E+ Sbjct: 75 QLGAGFDCASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYK 134 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L+ N + + K + DKFG + + +K Sbjct: 135 LHTHYP----------NSNLIVRFKSEAKEAQCPLGDKFGCDADVDAAALMLLAKSLELK 184 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++G H+GS +++++ +A K ++L + G+++ +D+GGG + Sbjct: 185 VTGTSFHVGSGCSELQAYDRAIKKAKNLFKFGALLGYDMDFLDIGGGFPGS-DDVKFEKI 243 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK-------TFVILD 305 + + + ++F + + II EPGRF VA LV K+ + ++ ++ + + D Sbjct: 244 AESVNTSVQRHFPDERVHIIAEPGRFFVAAACTLVCKIHAKREIRNEAGKLDTVMYYLND 303 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 F + ++ A H+ + I GP C+ D I+ + + GDL Sbjct: 304 GVYGSFNCILYDHQVVIAEHYLDNAESLPHLKSLIWGPSCDALDKISEDLHLPNLNRGDL 363 Query: 366 LYIEKTGAYGAVQSGTYNSRLLI 388 L GAY + +N + Sbjct: 364 LGFRNMGAYTMPIASAFNGFEVP 386 >gi|85715888|ref|ZP_01046866.1| Orn/DAP/Arg decarboxylase 2 [Nitrobacter sp. Nb-311A] gi|85697295|gb|EAQ35175.1| Orn/DAP/Arg decarboxylase 2 [Nitrobacter sp. Nb-311A] Length = 380 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 92/367 (25%), Positives = 148/367 (40%), Gaps = 20/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY TF+ A D+ V YA+KAN V+ LA LGS D + E+ Sbjct: 21 PCLVVDLDIVRDNYQTFAKALP--DSRVFYAVKANPAPEVLSLLASLGSCFDTATVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +RI F K +I A GI F V+ +E++ + + A I Sbjct: 79 MALAAGATPDRISFGNTIKKERDIARAYALGIRLFAVDCNAEVEKIARAAPGAKVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 139 YDCAGA----------EWPLSRKFGCEPEMAVEVLDVAKRLG-LEPVGISFHVGSQQRKL 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A ++ + + G N+ +++GGG Y D P + ++FG Sbjct: 188 KAWDRALAMVSQVFRDCGERGINLTMVNMGGGFPTRYLKDVPPVVQYGRSIFRALRKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ T+V+ I K +D I Y Sbjct: 248 NQIPETIIEPGRGMVGNAGVIETEVVLISKKSDDDENRWVYLDIGKFGGLAETMDESIRY 307 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + + GP C++ D + + LP GD L IE TGAY + S Sbjct: 308 AIRTPHDGAEMTPCVLAGPTCDSADVLYEKQPYPLPVTLEIGDKLLIEGTGAYTSTYSSV 367 Query: 382 -YNSRLL 387 +N Sbjct: 368 AFNGFPP 374 >gi|332020341|gb|EGI60763.1| Ornithine decarboxylase [Acromyrmex echinatior] Length = 471 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 80/383 (20%), Positives = 133/383 (34%), Gaps = 22/383 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I + + + ++ YA+K N N VI+ LA LG D S+ E+ + Sbjct: 36 FYVLDIGDIVQKHKIWKEKLPRVEP--YYAVKCNDNLIVIEVLAALGINFDCASKNEINK 93 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ V + RI+F+ K I A G+ V++ESEL + + + I Sbjct: 94 VLSFGVESSRIIFANPAKPASHIRHAAAVGVETMTVDNESELHKIKKLFPTAKIVLRIRC 153 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 KFG + + G+ + G H+GS Sbjct: 154 DAEMA----------QCPLGMKFGCDPIHEAPNLLHLAYNLGLNVIGFSFHVGSGCQDPP 203 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 F++A + L G +D+GGG + + + +YF Sbjct: 204 VFYRAIHHCKILFDMATDLGFKPYLLDLGGGYPGNKGTSIDKIAEI-INKALDEYFNTDA 262 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSAD--------KTFVILDVAMNDFMRPTLYDAY 320 +I EPGRF VA L T + S + ++ + LYD Sbjct: 263 VHVIAEPGRFYVASAFTLATSIHSKRSIRGDENSSAITHNMYYINDGVYGSFNCLLYDHQ 322 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 H + G I + + GP C+ D I N + G+ + E GAY + Sbjct: 323 HVTPIPLK-NGCGKMIPSSVWGPTCDGLDKIVENIMLNDMELGEWMIFENMGAYTLPVAS 381 Query: 381 TYNSRLLIPEIMVNGSQFHIIRP 403 +N + +V ++ Sbjct: 382 PFNGFPIPKVHIVADEDIWLLLK 404 >gi|302529561|ref|ZP_07281903.1| diaminopimelate decarboxylase [Streptomyces sp. AA4] gi|302438456|gb|EFL10272.1| diaminopimelate decarboxylase [Streptomyces sp. AA4] Length = 404 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 96/389 (24%), Positives = 156/389 (40%), Gaps = 14/389 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++LA TP Y Y ++ V YALKAN + + + L G Sbjct: 5 DELAARFGTPAYVYDLDVTAQSRDQLFGLLPE-GFAVYYALKANPHPEIARELREGGCRA 63 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 +I S GEL AL A E I+++G GKT E+ AL +G+ F+VES ++L+ + A Sbjct: 64 EISSTGELANALTAGFAPEDILYTGPGKTDGELAAALAAGVRLFSVESLTDLQHVGAAAE 123 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 A RVN + + G+ +FG+ + L + G KI G Sbjct: 124 RQDTVARCLLRVNTTQGSASTGIRMMGRPS-QFGVDAETLPELMPLFKAVGGTKIVGAHF 182 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS---- 254 S ++ ++ + QLR + GG + ++ + Sbjct: 183 FTMSNAQDEDALLAEYEFVLQSAAQLRQETGLPLELLDIGGGFSSPYAVPGERTDYPKLR 242 Query: 255 ----DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 L + + + ++ E GR+L G L+ V+++K+S FVILD +N Sbjct: 243 NGLEQLLDLYLPEWRSGEVELACESGRYLSGTCGTLLAGVVNVKESRGHRFVILDAGINV 302 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + V GD +VGP+C GD ++ K+ GDLL + Sbjct: 303 VGGLSGIGRLLPAAVGVEQVGDNPGQ---LVGPLCTPGDSLSKAAKLPELAAGDLLTVPN 359 Query: 371 TGAYGAVQS-GTYNSRLLIPEIMVNGSQF 398 GAYG S ++ R E++V G + Sbjct: 360 VGAYGVTASLISFLGRPAPTEVVVRGDEV 388 >gi|195029057|ref|XP_001987391.1| GH21896 [Drosophila grimshawi] gi|193903391|gb|EDW02258.1| GH21896 [Drosophila grimshawi] Length = 392 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 78/367 (21%), Positives = 152/367 (41%), Gaps = 20/367 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + +E+ + + + YA+K N + +++TLA LG+G D S+ E+++ Sbjct: 31 LNICDLSTVERMFQLWQQNMPRVKP--FYAVKCNDDPLILQTLAKLGAGFDCASKNEMKQ 88 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V ERI+F+ + I ++ A ++ + V++E E+ L++ Sbjct: 89 VLDLDVEPERIIFANPCRPISHLEYAKKNQVLKCAVDNEFEIYKLHKHFP---------- 138 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 N + + K + DKFG S + + ++G+ H+GS + + Sbjct: 139 NSNLIVRFKSEAKKAQCPLGDKFGCDADIDASALMLLAKSLNLTVTGISFHVGSGCMESQ 198 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ +A + ++L + G+++ +D+GGG + + + +YF + + Sbjct: 199 AYERAIRKAKNLFKFGELLGYDMNLLDIGGGFPGSNDEQFEKIAE-SINKAVQRYFPDER 257 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADK-------TFVILDVAMNDFMRPTLYDAYH 321 KII EPGRF VA LV K+ + ++ D+ + + D F Sbjct: 258 IKIISEPGRFFVAAAYTLVCKIHAKREVRDEAGKLDTVMYYLNDGVYGLFNCVLYDHQQV 317 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + +N + I GP C+ D I+ N + GD+L GAY + Sbjct: 318 TAQHYLNDDSSLPTFKSLIWGPSCDALDKISENVSLPNLNRGDILGFPNMGAYTVPIASA 377 Query: 382 YNSRLLI 388 +N L Sbjct: 378 FNGFPLA 384 >gi|319957271|ref|YP_004168534.1| orn/dap/arg decarboxylase 2 [Nitratifractor salsuginis DSM 16511] gi|319419675|gb|ADV46785.1| Orn/DAP/Arg decarboxylase 2 [Nitratifractor salsuginis DSM 16511] Length = 447 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 93/429 (21%), Positives = 169/429 (39%), Gaps = 29/429 (6%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--ALKANSNQAVIK 69 V + +L +P + +S IE+ Y AF V + + K N A+ Sbjct: 31 EIAGVDVRELVQNYGSPLFVFSQQEIEEKYHRLHEAFSSRYPDVVFGWSYKTNYLNAICN 90 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 LGS ++VSE E ++A A + + I+F+G K + + +A++ G ++ E Sbjct: 91 LYHKLGSIAEVVSEFEYQKARALGIEGKDIIFNGPYKPKEALKVAVEEGAKIH-IDHLFE 149 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + L + A LG K P+A RVN D F + + Sbjct: 150 INDLEEIARELGVKIPVAIRVNMDTGIYPQWSRF------GFNYESGEAIDAIERIHSGG 203 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG-------- 241 ++++G+ HIG+ + ++ K L DL Q GG Sbjct: 204 LLELTGLHSHIGTFMLDASAYGKETAKLMDLKHQAEERFGYRIEYIDIGGGFASKNRLKG 263 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQ-----CKIILEPGRFLVADVGILVTKVI-SIKK 295 + D P+ DYA I + ++ LE GR L+ + G L+T V + Sbjct: 264 VYQSPDVIVPTPDDYAQQITEAIYTHNKSDTLPRLYLETGRHLIDEAGYLLTTVQAYKRF 323 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 ILD +N T Y+ E ++ + L+ + + GP+C D ++ N Sbjct: 324 PDGMKGYILDAGVNLLYTATWYNFNFE----LDRRYEGLNEPSMLNGPLCMNIDILSENI 379 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ-FHIIRPRMTFQELIELD 414 + G ++ I GAY QS + R ++++ + H+I+ + + + Sbjct: 380 MLPPLDRGTVITIGPVGAYNYTQSMQFI-RYRPAAVLIDKERNVHLIKEPDDLETINYKE 438 Query: 415 SIPAWLQKT 423 IP +L+++ Sbjct: 439 RIPDYLKRS 447 >gi|328769068|gb|EGF79113.1| hypothetical protein BATDEDRAFT_35584 [Batrachochytrium dendrobatidis JAM81] Length = 468 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 72/408 (17%), Positives = 126/408 (30%), Gaps = 63/408 (15%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF+ + + + + ++ YA+K N + A+++TLA LG+G D S+ E+ Sbjct: 63 PFFVADLGDVVRQHQQWKALLPRVEP--FYAIKCNPDPAILQTLAGLGTGFDCASKAEID 120 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L V RI+++ K I A + ++ EL + Q S I Sbjct: 121 MVLEQGVDPSRIIYANPCKQASHIRHAGACNVKVMTFDNADELYKIKQAMPSAKMVLRIL 180 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + + SL A L + + G+ H+GS Sbjct: 181 ----------TDDSRSVCRFGIKFGASLAAVPSLLRTARELD-IDVIGISFHVGSGCYDA 229 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +F +A L R ++ N +D+GGG + + + Sbjct: 230 SAFSEAVLLARKAFDIGQALDFNFTLLDIGGGFPGRSTEGIQFTDVARLLRPVIDDNFPE 289 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKK-------------------------SADKTFV 302 ++I EPGR+ + L + + + Sbjct: 290 TVRVIAEPGRYFASSAFTLAVNIFARRVVLRDTIESTTASSEFGKDSPTTVSSQLSLDSE 349 Query: 303 ILDVAMNDFMRPTLYDAYHEI-------------------------NYIVNPAGDRLHIH 337 N+ Y + Sbjct: 350 CNPTNANEHPSYMYYINDGMYGSFNCLTFDHAVVKAIPLVRQGEYLFDSPEVSDSMPQFS 409 Query: 338 ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 I GP C++ D I + + + GD LY GAY + +N Sbjct: 410 CSIWGPTCDSIDCIGRECLLPMMKIGDWLYFSNMGAYTMAAASAFNGF 457 >gi|307323622|ref|ZP_07602832.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] gi|306891111|gb|EFN22087.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] Length = 464 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 88/395 (22%), Positives = 155/395 (39%), Gaps = 15/395 (3%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 ++++ AF + +A KA S V++ LA G G ++ S GEL +A+A Sbjct: 40 VDADGVQESVRDLHRAFGDAPVLHTFAAKAASLVPVLRLLARSGMGCEVASPGELAQAVA 99 Query: 92 APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVN 151 A P ERIV KT E+ AL G+ N ++ +E+ + + + R+N Sbjct: 100 AGFPPERIVLDSPAKTPAELAHALALGVA-VNADNFAEVDRIGDLLAVHESSSVLGLRIN 158 Query: 152 PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL-PGVKISGVDMHIGSQIDQIESF 210 P + A +ST KFG+P+ + T ++ + +H+GSQ ++ Sbjct: 159 PQVGAGAIDAMSTASPSSKFGVPLRDPGARQRVLDTFTERPWLTRLHVHVGSQGCSLDLI 218 Query: 211 HKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG--- 265 + + +L +++ + + +D+GGGL + + D P+ Y + Sbjct: 219 GEGVRATFELAEEINAAAGRQQVTSLDIGGGLPVNFDDDEIRPTYETYVRQLRAAVPGLL 278 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + ++ E GR LVA G V K + + + + R + Sbjct: 279 TGRYDLVTEFGRSLVAKNGFTAAVVEYTKDTGGRRIALTHAGAHIATRTVFMPDAWPLRI 338 Query: 326 IVNPAGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 V R D+ GP C GD +A R + PGD++ + TG Y + Sbjct: 339 AVYDRDGRPKHAPERVQDVAGPCCFAGDLVARERTLPELAPGDIVVLLDTGGYYFSTPWS 398 Query: 382 YNSRLLIPEIMVN----GSQFHIIRPRMTFQELIE 412 YNS +F +R T E++ Sbjct: 399 YNSLARPAVHGFTTHGPDLRFATVRREQTLAEILA 433 >gi|6979656|gb|AAF34583.1|AF212867_1 ornithine decarboxylase [Paracoccidioides brasiliensis] Length = 447 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 83/372 (22%), Positives = 138/372 (37%), Gaps = 32/372 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N + +++ + LG+G D S+ E+ Sbjct: 69 PFYVADLGQVYRQHIRWKKNLGRVKP--FYAVKCNPDPQILRLMVQLGNGFDCASKAEID 126 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL V RI+++ KT + A Q G+ ++ EL + + I Sbjct: 127 YALDVGVDPSRIIYAQPCKTKSFLRYASQVGVKQMTFDNSDELYKIKEMCPDAELYLRIL 186 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + SL A L + + GV H+GS + Sbjct: 187 ----------TDDSASLCRLSMKFGASLSVARSLLELAKEL-KLNVIGVSFHVGSGAEDP 235 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +SF KA + R + Q G +++ +DVGGG S + Sbjct: 236 KSFVKAVEDSRFVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLSDAL-----DEYFPP 290 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKS-------------ADKTFVILDVAMNDFMRP 314 +II EPGR+ VA L VI+ + + + L+ + Sbjct: 291 HIRIIAEPGRYYVASAFTLAANVIARRDVSLEMSDSDSTAGATEAYMIYLNDGVYGNFSN 350 Query: 315 TLYDAYHEINYIVNPAGD-RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 ++D H + I+ I I GP C+ D I + G+ LY E GA Sbjct: 351 IIFDHQHPVPQILTMESRVCAPIEYSIWGPTCDGIDLICERIALPELDVGNWLYFENMGA 410 Query: 374 YGAVQSGTYNSR 385 Y + +N Sbjct: 411 YTKCSATRFNGF 422 >gi|311258828|ref|XP_003127815.1| PREDICTED: ornithine decarboxylase-like [Sus scrofa] Length = 459 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 81/377 (21%), Positives = 126/377 (33%), Gaps = 28/377 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF + + + + F A + YA+K N+N V++ LA LG+G D S+GEL Sbjct: 66 PFMVANLDVLPRRHQLFHQALPRVSP--FYAVKCNNNPWVLRVLAALGTGFDCASQGELE 123 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + L VP RI+++ K + I A G+ +SE EL + Q + Sbjct: 124 QVLGLGVPPSRIIYANPCKPVSHILYAAHHGVQLLTFDSEEELIKVAQHYPGARLVLRLW 183 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S KFG + L A L + S+ Sbjct: 184 ----------TQDSESIFSLSTKFGARLELCEHLLKSARDLGVAVVGTSTGTADSERTXX 233 Query: 208 ESF---------HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 +A R L + GH++ +D+GGG D + A+ Sbjct: 234 XXXGXXXPATTVQQAIADCRCLFEMGLRIGHDMNFLDIGGGFPGEEGLDPKFEEXVINAT 293 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTK------VISIKKSADKTFVILDVAMNDFM 312 L + +II EPGRF A V + V+ + + D DF Sbjct: 294 LAQDFPEGSGVEIIAEPGRFYAAPVCTIAVNIIAKKAVVQPGGHRKLLYYLNDGYYGDFR 353 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF-IALNRKIALPRPGDLLYIEKT 371 + + + GP C+ D ++ GD L Sbjct: 354 VFLRDPEPKIPIVVKELGPEPPLFSCILFGPTCDAFDKLFLEELQLPELNVGDWLVFPTM 413 Query: 372 GAYGAVQSGTYNSRLLI 388 GAY V + T+N Sbjct: 414 GAYTNVMTSTFNGFPPA 430 >gi|254521715|ref|ZP_05133770.1| diaminopimelate decarboxylase, putative [Stenotrophomonas sp. SKA14] gi|219719306|gb|EED37831.1| diaminopimelate decarboxylase, putative [Stenotrophomonas sp. SKA14] Length = 864 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 113/377 (29%), Positives = 173/377 (45%), Gaps = 18/377 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +LA TP Y Y + A +D YA+KANS+ A+++ L G G Sbjct: 498 LLQLADA-GTPRYVYHLPTVRARARA-LAAIKPIDQR-YYAIKANSHPAILQLLEAEGFG 554 Query: 78 LDIVSEGELRRALAAPV--PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 L+ VS GEL+ +R++F+ E + A G+ E Q Sbjct: 555 LECVSHGELKHVFQHLPELSPKRVLFTPSFCPRSEYEAAFALGVTVTVDNVE-----ALQ 609 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 R L + + RV+ H K+ TG K+ KFG+PI ++ A+ L ++ G Sbjct: 610 RWPDLFRNRELWLRVDLGRGEGHHAKVRTGGKDSKFGLPIARVDEFVRAATELG-SRVVG 668 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + H+GS ++ + + L +++ ++Q ID+GGGL I Y + P Sbjct: 669 LHAHLGSGVETAQHWRLMCDELAGFARRIG----SVQTIDIGGGLPIPYSDEDEPFDLDA 724 Query: 256 YASLIHQYFGNLQCKIIL-EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 +A + + + EPGR+LVA+ G+L+T + + V LD MN MRP Sbjct: 725 WAEGLAEVKALHPAFRLAIEPGRYLVAESGVLLTHATQVVEKDGVRRVGLDAGMNTLMRP 784 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGA 373 LYDA+H+I + G D+VGPICE+ D RK+ + P D++ I GA Sbjct: 785 ALYDAWHDIENLSRQ-GGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIADAGA 843 Query: 374 YGAVQSGTYNSRLLIPE 390 YG V S TYN R + E Sbjct: 844 YGYVMSNTYNQRAMPRE 860 >gi|124298701|gb|ABN04356.1| putative ornithine decarboxylase [Theobroma cacao] Length = 411 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 72/364 (19%), Positives = 126/364 (34%), Gaps = 20/364 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ YA+K N N A++ LA LGSG D S+ E+ Sbjct: 47 PFYVLDLGVVMALFDKWARNLPM--AQPFYAVKCNPNPALLGALATLGSGFDCASKAEIE 104 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ V RI+F+ K I A G+ +S+ EL+ + + + Sbjct: 105 SVLSLGVSPGRIIFANPCKAESHIKYAATVGVNLTTFDSKEELEKIKKWHPKCALLIRV- 163 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + + + A+ + ++GV HIGS Q Sbjct: 164 ---------KAPDDGGARCPLGPKYGALPEEVTPLLQAAQTARLTVTGVSFHIGSGAMQF 214 Query: 208 ESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ +A + + + R + +++GGG +S+ A+L + Sbjct: 215 RAYREAIAAAKTVFETAARLGMPKMHVLNIGGGFTA--GPQFAEAASTVKAALQAYFPNE 272 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +I EPGRF L T +I + D ++ + M LYD Sbjct: 273 PSLTVIAEPGRFFAESAFTLATNIIGKRVRGDLREYWINDGIYGSMNCILYDHAVVTCMP 332 Query: 327 VNPAGDRL-----HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + A + + GP C+ D + + + D L GAY A Sbjct: 333 LARASSPRCKGARTYDSTVFGPTCDALDTVLKVYPLPELQVNDWLVFPNMGAYTAAAGSN 392 Query: 382 YNSR 385 +N Sbjct: 393 FNGF 396 >gi|149024091|gb|EDL80588.1| similar to ornithine decarboxylase (predicted) [Rattus norvegicus] Length = 421 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 82/362 (22%), Positives = 131/362 (36%), Gaps = 16/362 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF + + TF A + YA+K N+ +++ LA LG+G D S+GEL Sbjct: 61 PFMVADLDVLASRHQTFLQALPRVWP--FYAVKCNNRPSLLLVLAALGTGFDCASQGELE 118 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + L V RI+F+ K + I A + G+ +SE EL L + I Sbjct: 119 QVLGLGVAPSRIIFANPCKAVSHIQYAARCGVQLLTFDSEEELTKLARHHPGARLILRI- 177 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T ST KFG + L A L + G H+GS Sbjct: 178 ---------QTLGGRSTFPLHTKFGARLLACGRLLQVARELGLA-VVGASFHVGSDCHTP 227 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY--ASLIHQYFG 265 +S+ +A + + GH + +D+GGG S+ + + A+L + Sbjct: 228 QSYRQAIADCHRVFEMGCKAGHQMSLLDLGGGFPGIEGSEAKFEEMARVVNAALAQYFPE 287 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++I EPGRF V +I+ K S + + + + Sbjct: 288 GTGVEVIAEPGRFYAESVCTAAVNIIAKKASLEPGGHRKLAYYLNEGHYGAFRIFLRDPV 347 Query: 326 IVNPAGDRLHIHADIVGPICETGD-FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 D + GP C+ D + ++ GD L GAY + S T+N Sbjct: 348 PRELPSDPHLFPCTLYGPTCDAFDRLFSTEVQLPELDVGDWLVFPDMGAYRSTMSSTFNG 407 Query: 385 RL 386 Sbjct: 408 FP 409 >gi|326504166|dbj|BAK02869.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 457 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 84/367 (22%), Positives = 147/367 (40%), Gaps = 21/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF+ I ++ + + YA+K N + VIK LA+LG+G D S+GE++ Sbjct: 37 PFFAVDLEDICNKHIRWLTSMPR--VTPHYAIKCNDDINVIKLLAYLGAGFDCASKGEIK 94 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + + V A+RI+++ K I A + G+ ++E EL + Q + + Sbjct: 95 KVMDLGVSADRIIYANPCKQSSYIRYAHEVGVDVMTFDNEQELLKIKQCHSNAKLVLRLV 154 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG ++ L A L +I GV H GS Sbjct: 155 ----------TDDSNAVCRFSMKFGADMNTARKLIDKAQELDM-EIIGVSFHCGSGQMTS 203 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY--ASLIHQYFG 265 ++F A + R + G ++ +D+GGG ++ + A++ + Sbjct: 204 KAFVDAIQNARMIMNYGNKLGFTMKLLDLGGGFPGNTGTEEYFAEIASAVNATIDEHFPE 263 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADK------TFVILDVAMNDFMRPTLYDA 319 N +II EPGR+ VA L T VI+ ++ D ++ + LYD Sbjct: 264 NENVRIIAEPGRYYVASAYTLATNVIASREMIDPETGAVKYMYYINDGVYGSFNCVLYDH 323 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 Y + + + I GP C+ D I + ++ GD +Y + GAY + Sbjct: 324 YVPEPCLFDKNKSNDSYTSSIWGPTCDGLDCIQTSIQLPKLEIGDWIYWKNMGAYTISAA 383 Query: 380 GTYNSRL 386 +N Sbjct: 384 VQFNGLP 390 >gi|222099782|ref|YP_002534350.1| Ornithine decarboxylase [Thermotoga neapolitana DSM 4359] gi|221572172|gb|ACM22984.1| Ornithine decarboxylase [Thermotoga neapolitana DSM 4359] Length = 386 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 93/373 (24%), Positives = 160/373 (42%), Gaps = 19/373 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPF + + +EK +L A G D + YA+KANS+ ++ LA LG D+ S+GE+ Sbjct: 14 TPFLLFDLSVVEKKFLEMKAALKGAD--IYYAVKANSHPRILSLLAKLGCNFDVASKGEI 71 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + LA + +R+ F K ++I A ++GI F V+SE E++ + A I Sbjct: 72 EKLLALGISGKRMSFGNTIKKEEDIAFAYKNGIRLFAVDSEMEIEKVAISAPGSRIFVRI 131 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A T + KFG L YA+ + + +GV H+GSQ Sbjct: 132 A----------TDGSDADWPLSRKFGTDPDHALDLLFYAAKMKLI-PAGVSFHVGSQNLN 180 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS---LIHQY 263 ES+ KA + + ++ +G N+ ++VGGG + + + Sbjct: 181 PESWRKAISVAGKIFKKAMRSGLNLFLLNVGGGFPVQHRKPIPTMEEIGRVIEEAIDENL 240 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + K+I EPGR++V + G LVTKV+ + + +V LD + + T+ + +E+ Sbjct: 241 WFVHGLKLISEPGRYMVGEAGWLVTKVLLKSERNGEKWVYLDAGVFHGLAETMQNFEYEV 300 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTY 382 + + + GP C++ D I + DL+ GAY + + Sbjct: 301 RVLGKENDE--LEEYHLAGPTCDSVDVIYDRILLPKTITLNDLVCFVNAGAYTVEYNTYF 358 Query: 383 NSRLLIPEIMVNG 395 N + V Sbjct: 359 NGIEPPKMVFVEE 371 >gi|332532720|ref|ZP_08408594.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis ANT/505] gi|332037747|gb|EGI74197.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis ANT/505] Length = 401 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 78/399 (19%), Positives = 156/399 (39%), Gaps = 11/399 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ + + TPF+ Y + + D + YA+KAN +I++L G Sbjct: 11 AVNTITQQLDTPFFVYDLDQLNTHLARLVA---QTDVKLWYAVKANPLSKIIQSLDSAGF 67 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S+GEL + LA + ++R++ +G K+ +I ++ G+ F ES ++++ LNQ+ Sbjct: 68 NFDVASKGELEQVLAQGISSQRVLNTGPAKSPKQIKHFIERGVRIFVAESLNQVRWLNQQ 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A + + RV + + + + P +K G+ Sbjct: 128 AQLQNTQLQVLLRVQLRWPEGEKNPLGG---DSLTPFGLGCDEWQALNVADYPALKFDGL 184 Query: 197 DMHIGSQIDQIESFHKAF-KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + + + + +++ L+Q +++ +D+GGGLGI Y + D Sbjct: 185 HIFQWGNMLSTQKLSDLWSQMIAPLSQLASDLNISLKILDLGGGLGIPYTQNEATLDWDD 244 Query: 256 Y-ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 A+L ++ +E GR+ V + G V+ K++ ++ VIL +N +RP Sbjct: 245 LIAALAKIKNDAGVEELWMELGRYAVGECGHYANPVVERKQNYNQEQVILSGGINHLLRP 304 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + GP+C D + + + D L + GAY Sbjct: 305 AVTSQDFPAALLRE--SSAKTQAVTLYGPLCTALDCLGEHNLPSDLNEHDWLVFSQCGAY 362 Query: 375 GAVQSGTY-NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 G +S Y L E + +R + Sbjct: 363 GFTESMPYFLCHELAAEYTLQNGTLTCVRQAENASHYLR 401 >gi|209154586|gb|ACI33525.1| Ornithine decarboxylase 1 [Salmo salar] Length = 456 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 84/378 (22%), Positives = 143/378 (37%), Gaps = 31/378 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + K ++ ++ A YA+K N ++ V+ TLA LG+G D S+ E++ Sbjct: 38 FYVCDLSDVLKKHMRWARAMPR--VTPFYAVKCNDSRTVVTTLASLGAGFDCASKTEIQI 95 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V A RI+++ K + +I A G+ +S+ EL + + + IA Sbjct: 96 VQSLGVDASRIIYANPCKQVSQIKYASAHGVQMMTFDSDVELMKVARCHDNAKLVLRIA- 154 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + GV H+GS + Sbjct: 155 ---------TDDSKAVCQLSVKFGATMKACRGLLERAKELGL-NVIGVSFHVGSGCTDPD 204 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ +A R + G N+ +D+GGG + + + + + + + Sbjct: 205 TYSQAISDARCVFDMGAEVGFNMTLLDIGGGFPGSEDTKLKFEEITAVINPALDKYFPAD 264 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY--------- 317 +II EPGR+ VA L VI+ K ++ + R +Y Sbjct: 265 SGIRIIAEPGRYYVASAYTLAVNVIAKKVIMNEQSASDEDDDWTSDRTLMYYVNDGVYGS 324 Query: 318 -------DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 A+ P D I GP C+ D IA + + G+ L E Sbjct: 325 FNCILYDHAHPLPTLHKKPKPDERMYPCSIWGPTCDGLDRIAEVCTLPDMQVGEWLLFEN 384 Query: 371 TGAYGAVQSGTYNSRLLI 388 GAY S T+N Sbjct: 385 MGAYTVAASSTFNGFQKP 402 >gi|320007593|gb|ADW02443.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces flavogriseus ATCC 33331] Length = 412 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 105/405 (25%), Positives = 161/405 (39%), Gaps = 17/405 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--- 75 LA TP Y Y + A + V YA KAN + +++ + G Sbjct: 5 TDLARRFGTPSYVYDLDRVAAARDDLFAALPD-EVAVYYAAKANPHPEILREMRAGGPRV 63 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +I S GEL L A I+++G GKT +E+ A+ G+ F+VES +L+ + Sbjct: 64 CRAEISSVGELDAVLRAGFAGAEILYTGPGKTTEELAEAMTRGVRTFSVESPGDLRHVGD 123 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 AV LG A RVN A TG +FG + L A +PG I+G Sbjct: 124 TAVQLGITADCLIRVNNPTGAAATSIRMTGVPS-QFGFDGETLPGLAAELRDVPGTTIAG 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + S S F+ R G + + +D+GGG Y R P Sbjct: 183 LHFFPLSNAKDEASLIAEFRHTIATAAALQRELGVDFRIVDLGGGFAAPYAVQGRRPVYG 242 Query: 255 DYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + + E GR+LVAD G L+T V+++K S +V+LD Sbjct: 243 ELREALATSLDEHFPGWRDGAPRIACESGRYLVADSGTLLTGVVNVKDSRGTRYVVLDAG 302 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 +N F + ++ + + + + GP+C GD + +A P PGDLL Sbjct: 303 INTFGGMSGLGRILPVSIEPHESVGTDGVPVQLAGPLCTPGDLLGRQVPLADPAPGDLLT 362 Query: 368 IEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQFHIIRPRM---TFQ 408 + G+YG S + R EI+V G + T++ Sbjct: 363 VPNAGSYGPTASLLMFLGRPAPTEIIVRGDDLVSVSRIEHTRTYE 407 >gi|289672833|ref|ZP_06493723.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae FF5] Length = 205 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 83/204 (40%), Positives = 118/204 (57%), Gaps = 4/204 (1%) Query: 213 AFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKII 272 A L DL +L G ++ HID+GGGLG+ Y + P ++DY + + ++ Sbjct: 3 ALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEP-PLAADYIKAVRERLAGRDLGLL 61 Query: 273 LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 EPGRF+VA+ G L+T+V +K + K F I+D AMND +RP LY A+ ++ + D Sbjct: 62 FEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAVRPR--D 119 Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 DIVGPICETGDF+A R++A GDLL + GAYG V S YN+R E++ Sbjct: 120 SEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVL 178 Query: 393 VNGSQFHIIRPRMTFQELIELDSI 416 V+GSQ +R R T EL +S+ Sbjct: 179 VDGSQAFEVRRRETVAELFAGESL 202 >gi|194364789|ref|YP_002027399.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Stenotrophomonas maltophilia R551-3] gi|194347593|gb|ACF50716.1| diaminopimelate decarboxylase [Stenotrophomonas maltophilia R551-3] Length = 864 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 114/377 (30%), Positives = 174/377 (46%), Gaps = 18/377 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +LA TP Y Y + A +D YA+KANS+ A+++ L G G Sbjct: 498 LLQLADA-GTPRYVYHLPTVRARARA-LAAIKPIDQR-YYAIKANSHPAILQLLEAEGFG 554 Query: 78 LDIVSEGELRRALAAPV--PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 L+ VS GEL+ +R++F+ +E + A G+ E Q Sbjct: 555 LECVSHGELKHVFQHLPELSPKRVLFTPSFCPREEYEAAFALGVTVTVDNVE-----ALQ 609 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 R L + + RV+ H K+ TG K+ KFG+PI ++ A+ L ++ G Sbjct: 610 RWPDLFRNRELWLRVDLGRGEGHHAKVRTGGKDSKFGLPIARVDEFVRAATELG-TRVVG 668 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + H+GS ++ + + L +++ ++Q ID+GGGL I Y + P Sbjct: 669 LHAHLGSGVETAQHWRLMCDELAGFARRIG----SVQTIDIGGGLPIPYSDEDEPFDLDA 724 Query: 256 YASLIHQYFGNLQCKIIL-EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 +A + + + EPGRFLVA+ G+L+T + + V LD MN MRP Sbjct: 725 WAEGLAEVKALHPAFRLAIEPGRFLVAESGVLLTHATQVVEKDGVRRVGLDAGMNTLMRP 784 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGA 373 LYDA+H+I + G D+VGPICE+ D RK+ + P D++ I GA Sbjct: 785 ALYDAWHDIENLSRQ-GGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIADAGA 843 Query: 374 YGAVQSGTYNSRLLIPE 390 YG V S TYN R + E Sbjct: 844 YGYVMSNTYNQRAMPRE 860 >gi|226313832|ref|YP_002773726.1| hypothetical protein BBR47_42450 [Brevibacillus brevis NBRC 100599] gi|226096780|dbj|BAH45222.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 423 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 88/393 (22%), Positives = 144/393 (36%), Gaps = 13/393 (3%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 FY T + NY F AF +V Y+ K N + + L LG+ ++VS E Sbjct: 18 FYVLDTEKLSDNYRRFQRAFTRRYEHVVVAYSYKTNYLPFLCQKLHQLGAHAEVVSRLEY 77 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A V I+F+G KT D+I AL+ G + + I Sbjct: 78 ELARKLGVDPASIIFNGPLKTEDDIHFALEQGSLINLDSFSEIPWVVAYAMQYPEQTFRI 137 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--YASTLPGVKISGVDMHIGSQI 204 R+N D+ + G + +FG + + A + P V + G+ H + Sbjct: 138 GLRINVDLARGGVSPLQNGYEVSRFGFCVENGNLEKALSQLAVAPNVHVVGLHGHFSTNR 197 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS------ 258 L R Q L I G P+ +YA Sbjct: 198 SVGVYRQITRHLCRLGKQHLGERLAFIDIGGGFFGELPTSFGMTAAPTFEEYAEAITSVV 257 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + +ILEPG LVAD V +VI +K++ + FV++D ++++ Sbjct: 258 KEELAELDHAPLLILEPGISLVADAVDFVCRVIDVKENKGERFVLVDGSIHNVK--PTMH 315 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 ++ +V +VG C D++ LP GD GAY V Sbjct: 316 SHLLPARLVCNRKPVPEATYHVVGYTCMEKDYLLQGYTGPLPDIGDYFVFGHVGAYTLVF 375 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + + R P + ++G++ I+R + T Q+ I Sbjct: 376 NPPFI-RERPPVLAIDGNEAFIVRGKETLQQFI 407 >gi|195474574|ref|XP_002089566.1| GE19169 [Drosophila yakuba] gi|194175667|gb|EDW89278.1| GE19169 [Drosophila yakuba] Length = 394 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 79/380 (20%), Positives = 146/380 (38%), Gaps = 24/380 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 E L+ L +++E+ + ++ YA+K N + V+K LA Sbjct: 21 IEQADLQNLDQA----LNICDLSSLERKLRLWHKLMPRIEP--HYAVKCNDDPVVVKFLA 74 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 LG+G D S+ EL+ L V ERI+F+ + + A + + V++E E+ Sbjct: 75 DLGTGFDCASKNELKLVLGFGVSPERIIFAHPCRPASHLKYAKEQQVVNGTVDNEYEVYK 134 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L + N + + K + DK+G + + +K Sbjct: 135 LKKHYP----------GSNLIVRFKSEAKKALCPLGDKYGCDAESDAAALMLLAKALDLK 184 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++G H+GS ++E++ +A + + + GH ++ +D+GGG + Sbjct: 185 VTGTSFHVGSGCSEVEAYDRAIERAESIFKVGEFVGHKMEMLDIGGGFPGIDDDMFEKIA 244 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-------KTFVILD 305 + + F + + +II EPGRF V L+ KV + ++ + + D Sbjct: 245 Q-AVNTSLDLCFPDERVRIISEPGRFFVEAAYTLICKVHAKREVRGKDGKLDTMMYYLND 303 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 F Y ++ A + + I GP C+ D I + + PGDL Sbjct: 304 GIFGAFAAMFYYPEELTPVLYLDDAESLPKLKSVIWGPSCDALDKILGDLLLPNLNPGDL 363 Query: 366 LYIEKTGAYGAVQSGTYNSR 385 L GAY + +N Sbjct: 364 LGFHNMGAYTMPIASPFNGF 383 >gi|86751645|ref|YP_488141.1| ornithine decarboxylase [Rhodopseudomonas palustris HaA2] gi|86574673|gb|ABD09230.1| ornithine decarboxylase [Rhodopseudomonas palustris HaA2] Length = 380 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 90/367 (24%), Positives = 149/367 (40%), Gaps = 20/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ +F+ A D+ V YA+KAN V+ LA LGS D S E++ Sbjct: 21 PCLVVDLDVVRDNFASFAKALP--DSRVFYAVKANPAPEVLSLLASLGSCFDCASVQEIQ 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +RI F K +I A GI F+V+ +E++ + + A I Sbjct: 79 MALAAGATPDRISFGNTIKKERDIARAFALGIRLFSVDCSAEVEKIARSAPGSKVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 139 YDCAGA----------EWPLSRKFGCDPEMAVDVLDAAKRLG-LEPYGISFHVGSQQRKV 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A + + + G N+ +++GGG Y + + ++FG Sbjct: 188 KAWDRALAMAATVFRDCAERGINLSMVNMGGGFPTKYLKEVPAVVQYGRSIFRALRKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + GI+ T+V+ I K +D+ + I Y Sbjct: 248 NQIPETIIEPGRGMVGNAGIIETEVVLISKKSDEDEMRWVYLDIGKFGGLAETMDESIRY 307 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + + GP C++ D + LP GD L IE TGAY + S Sbjct: 308 AIKSRHDGAEMAPCVLAGPTCDSADVMYEKLPYPLPVTLEIGDKLLIEGTGAYTSTYSAV 367 Query: 382 -YNSRLL 387 +N Sbjct: 368 AFNGFPP 374 >gi|119485611|ref|ZP_01619886.1| Orn/DAP/Arg decarboxylase 2 [Lyngbya sp. PCC 8106] gi|119456936|gb|EAW38063.1| Orn/DAP/Arg decarboxylase 2 [Lyngbya sp. PCC 8106] Length = 423 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 99/412 (24%), Positives = 170/412 (41%), Gaps = 29/412 (7%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 Y+ I + Y + + + Y LKANSN + LA LG G DI S GEL+ AL Sbjct: 2 YNLNKISRQYSKLRDYLP-PNFNILYTLKANSNLTICHRLAQLGCGADISSTGELKAALK 60 Query: 92 APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVN 151 A +IVF+G GKT E+ A+++GI +ES +E + LN A GKK + R+N Sbjct: 61 TGFSAPQIVFTGPGKTNSELAAAIEAGIGIIVLESINEARRLNNLAQKYGKKQDVLIRIN 120 Query: 152 PDINANTHKKISTGKKED----------------------KFGIPIHQIHSLYAYASTLP 189 P N +I KFG+ ++ A ++L Sbjct: 121 PLYRTNQSCEIREKASSCGANDTNSVQPSLTIQTIASSSSKFGVDENKAIEEIAAINSLE 180 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + G+ + S + + ++ + ++ G++I +D GGG+GI Y++ Sbjct: 181 NLNLKGIHIFTESNVLDYQQLLASWTNTISIANKINDQGYHISLLDFGGGIGIPYNTVDP 240 Query: 250 PPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + I+E GR+LV + G +T+V+ IK+S + F+ILD Sbjct: 241 EFDMESFGKELQRIFENNPYSYHCIVEIGRYLVGEAGCYITEVVDIKESLGQKFIILDGG 300 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLL 366 ++ +R ++ A + + A + G + D + + + GD L Sbjct: 301 VHQLLRLSMKPASKYMEVLGKNGN--YTQKATLGGKLPTPLDIMVEDVMVPEDIEIGDRL 358 Query: 367 YIEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIP 417 I GAYG S + E+ + + +IR ++ +P Sbjct: 359 VIYNCGAYGFNHSLTNFALHNYPAEVAYSDGEMELIREPGKIEDFFLNQKLP 410 >gi|11514289|pdb|1D7K|A Chain A, Crystal Structure Of Human Ornithine Decarboxylase At 2.1 Angstroms Resolution gi|11514290|pdb|1D7K|B Chain B, Crystal Structure Of Human Ornithine Decarboxylase At 2.1 Angstroms Resolution Length = 421 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 84/382 (21%), Positives = 139/382 (36%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+ N ++A++KTLA G+G D S+ E++ Sbjct: 34 FYVADLGDILKKHLRWLKALPR--VTPFYAVXCNDSKAIVKTLAATGTGFDCASKTEIQL 91 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 92 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 150 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 151 ---------TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPE 200 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 201 TFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSD 260 Query: 267 LQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDF 311 +II EPGR+ VA L + + + D F Sbjct: 261 SGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSF 320 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 321 NCILYDHAHVKPLLQKRPKPDERYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 380 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 381 GAYTVAAASTFNGFQRPTIYYV 402 >gi|169774255|ref|XP_001821595.1| ornithine decarboxylase [Aspergillus oryzae RIB40] gi|83769458|dbj|BAE59593.1| unnamed protein product [Aspergillus oryzae] Length = 399 Score = 159 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 88/372 (23%), Positives = 140/372 (37%), Gaps = 30/372 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF+ + I + +L + ++ D YA+K NS+ ++ L LG D S+GE+ Sbjct: 35 PFFVADGSRIVEQHLRWKSSLP--DIQPFYAVKCNSDVNFLRYLDRLGVNFDCASQGEIE 92 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ V RI+F+ K+I + A + GI ++ EL+ + Q + +G I Sbjct: 93 LILSLGVDPSRIIFAHPCKSISALHFAAKQGIRWATFDNIDELEKVKQHSPQIGLLLRIF 152 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + DKFG P + +L A L ++I GV HIGS Sbjct: 153 ----------AEDDGAKVCLGDKFGAPWNTTVALLERAREL-HLQIVGVSFHIGSGASDP 201 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 E+F A + R + Q G N+ +DVGGG A + FG+ Sbjct: 202 EAFTTAIQQARHVFDQGERLGFNMTVLDVGGGFQHTNFEFMASSLRPALA----REFGDR 257 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSAD------------KTFVILDVAMNDFMRPT 315 ++I EPGRF LV KVI+ + + + Sbjct: 258 PVRVIAEPGRFFATPCYTLVCKVIARRTHIGAAPSNPADMLYQNDGLYGCFSCGWSEGEE 317 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN-RKIALPRPGDLLYIEKTGAY 374 + N + + + GP C++ D IA + GD L + GAY Sbjct: 318 YMPVLVKQNEGRDDHRESGEHRYSLWGPTCDSIDQIAKEVVMDGEVKVGDWLVYKDMGAY 377 Query: 375 GAVQSGTYNSRL 386 S +N Sbjct: 378 TMSASSQFNGFP 389 >gi|6573548|pdb|2TOD|A Chain A, Ornithine Decarboxylase From Trypanosoma Brucei K69a Mutant In Complex With Alpha-Difluoromethylornithine gi|6573549|pdb|2TOD|B Chain B, Ornithine Decarboxylase From Trypanosoma Brucei K69a Mutant In Complex With Alpha-Difluoromethylornithine gi|6573550|pdb|2TOD|C Chain C, Ornithine Decarboxylase From Trypanosoma Brucei K69a Mutant In Complex With Alpha-Difluoromethylornithine gi|6573551|pdb|2TOD|D Chain D, Ornithine Decarboxylase From Trypanosoma Brucei K69a Mutant In Complex With Alpha-Difluoromethylornithine Length = 425 Score = 159 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 84/396 (21%), Positives = 146/396 (36%), Gaps = 31/396 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PF+ I + + T+ YA+ N + V+ TLA LG+G D S E Sbjct: 37 GDPFFVADLGDIVRKHETWKKCLPR--VTPFYAVACNDDWRVLGTLAALGTGFDCASNTE 94 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++R VP E+I+++ K I I A SG+ + EL+ + + Sbjct: 95 IQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLR 154 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I +T ++ + KFG + + A L + ++GV H+GS Sbjct: 155 I----------STDDSLARCRLSVKFGAKVEDCRFILEQAKKL-NIDVTGVSFHVGSGST 203 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQY 263 +F +A R + G N+ +D+GGG + + + + + Sbjct: 204 DASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHF 263 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAM 308 +L+ I+ EPGR+ VA L VI+ K + + + D Sbjct: 264 PPDLKLTIVAEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVY 323 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 F A P + + + GP C+ D I + + G+ L Sbjct: 324 GSFNCILYDHAVVRPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLF 383 Query: 369 EKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIRP 403 E GAY V + ++N +V+G H++R Sbjct: 384 EDMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVRE 419 >gi|17562780|ref|NP_504752.1| Ornithine DeCarboxylase family member (odc-1) [Caenorhabditis elegans] gi|12644263|sp|P41931|DCOR_CAEEL RecName: Full=Ornithine decarboxylase; Short=ODC gi|1658364|gb|AAB18317.1| Ornithine decarboxylase protein 1, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 422 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 79/405 (19%), Positives = 150/405 (37%), Gaps = 26/405 (6%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 +++ K + F I + + + ++ YA+K N++ +I+ L Sbjct: 25 MCRDIAASKDLQENDSSFMLVDLDKIIERFQLWKRELPMIEP--FYAVKCNTDLVLIRIL 82 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 A LG G D S+ E+ + V AERI+++ KT I A+ + ++ EL Sbjct: 83 ASLGCGFDCASKDEIDIVMGTGVSAERIIYANPCKTRSFIAHAMDRDVKMMTFDNPEELL 142 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + + IA +T KFG ++ G+ Sbjct: 143 KIAKLHPNAEMILRIAVS----------DPTATCPLNLKFGADPIIAAPQLLKTASEEGI 192 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + G+ H+GS + ++ A + ++L + G + ID+GGG A H + Sbjct: 193 NVVGISFHVGSGCNDASAYRNALQHAKNLCEIGEGLGFKMDIIDMGGGFPGAEHHNPFEK 252 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS-------------IKKSAD 298 + + ++F + ++I EPGRF A LV +I + Sbjct: 253 IAETIRDALDEFFPDTNKRLIAEPGRFFAAGPFSLVANIIHATEVPASKITKDPKDCADH 312 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 ++ + L+D H I + + I GP C++ D + + + Sbjct: 313 GYMYYINDGVYGSFNCILFDHAHPIGSPLFDTDRNEKFMSTIWGPTCDSLDLVEDKKLMP 372 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLI-PEIMVNGSQFHIIR 402 G+ LY GAY + T+N P +++ + IR Sbjct: 373 KMNVGEWLYYPDMGAYTLAAATTFNGFSKPVPMYVMSEEMWESIR 417 >gi|115526790|ref|YP_783701.1| ornithine decarboxylase [Rhodopseudomonas palustris BisA53] gi|115520737|gb|ABJ08721.1| ornithine decarboxylase [Rhodopseudomonas palustris BisA53] Length = 380 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 88/367 (23%), Positives = 148/367 (40%), Gaps = 20/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ TF+ A D+ V YA+KAN V+ LA +GS D S E+ Sbjct: 21 PCLVVDLEVVRDNFQTFATALP--DSRVFYAVKANPAPEVLTLLASMGSCFDCASVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +RI + K +I A GI ++V+ +E++ + + A I Sbjct: 79 MALAAGATPDRISYGNTIKKERDIARAFALGIGLYSVDCAAEVEKIARVAPGARVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 139 YDCAGA----------EWPLSRKFGCDPEMAVDVLDLAKRLG-LEPYGISFHVGSQQRKV 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A + + + G N+ +++GGG Y + + ++FG Sbjct: 188 KAWDRALAMASSVFRDCAERGINLSMVNMGGGFPTKYLKEVPAVVQYGRSIFRALRKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + GI+ T+V+ I + +D+ V I Y Sbjct: 248 NQIPETIIEPGRGMVGNAGIIETEVVLISRKSDEDDVRWVYLDIGKFGGLAETMDESIRY 307 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + + GP C++ D + LP GD L IE TGAY + S Sbjct: 308 AIRSRHDGAEMTPCVLAGPTCDSADVMYEKLPYPLPVTLEIGDKLLIEGTGAYTSTYSSV 367 Query: 382 -YNSRLL 387 +N Sbjct: 368 AFNGFPP 374 >gi|325190815|emb|CCA25305.1| ornithine decarboxylase 1 putative [Albugo laibachii Nc14] Length = 599 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 83/396 (20%), Positives = 144/396 (36%), Gaps = 28/396 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY A+EK Y ++ + YA+K N +Q +++TLAHLG G D S E+ Sbjct: 206 FYVVDLHALEKRYQLWNKHLPFVKP--FYAVKCNPDQQLLQTLAHLGCGFDCASRAEIDA 263 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V A+ I+++ K I + + +S EL + + + Sbjct: 264 VLRLGVHAKEIIYANPCKQPSHIRHSASQSVNLMTFDSHDELDKIEATNSNAKLVLRLYV 323 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + + KFG +H + S+ ++A TL + GV H+GS + Sbjct: 324 D----------DTKAICRLGTKFGAMLHDVPSILSHAKTLGL-DVVGVSFHVGSGCYSVS 372 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD--YASLIHQYFGN 266 ++ A K R + G + + +D+GGG + + SL + + Sbjct: 373 AYSDAVKRARTAFDIGANLGFSFELLDIGGGFPGTENGPITFKECAQELATSLEKWFPRS 432 Query: 267 LQCKIILEPGRFLVADVGILVTKVIS-----------IKKSADKTFVILDVAMNDFMRPT 315 ++I EPGRF A L VI + ++ + Sbjct: 433 SHVQVISEPGRFFAASTHTLAACVIGRKVAPILESFVHETVESSYMYFINDGLYGSFNCL 492 Query: 316 LYDAY--HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 +YD + P + A I GP C+ D I + ++ R G + GA Sbjct: 493 IYDHPDIQPVVLATEPVNSKDFRLASIWGPTCDGMDCIMKDIRMPQLRVGQWICFPSMGA 552 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 Y +N ++ ++ Q R M F + Sbjct: 553 YTCAAGSDFNGFAPPAKLYIDTKQLFEFRQEMQFSD 588 >gi|148977324|ref|ZP_01813938.1| putative diaminopimelate decarboxylase protein [Vibrionales bacterium SWAT-3] gi|145963437|gb|EDK28701.1| putative diaminopimelate decarboxylase protein [Vibrionales bacterium SWAT-3] Length = 400 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 91/374 (24%), Positives = 156/374 (41%), Gaps = 14/374 (3%) Query: 12 HAENVSLEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 H E +++LA+ P Y Y +E++ + + + YA KAN + +++ Sbjct: 10 HIEQ-EIKQLANQQNQPLCAYLYDLNELEQHIKQMRHVLPK-NVELFYAAKANPSAPILR 67 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 TLA G + S GEL + + ++F G GK E++ A+Q + +VES +E Sbjct: 68 TLAPYVDGFEAASGGELSHLQQQLLN-KPLIFGGPGKMPSELEQAIQLDVDAIHVESITE 126 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L+ + L + A I R+N DI T K++ G K FG ++ + + P Sbjct: 127 LQRIGALTQKLNRSASIFLRMNIDIGDITLSKLAMGGKPTPFGFDEAELDNAIMHLRDFP 186 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGIAYHSDH 248 +++ G H+ S + + + +Q + I++GGG+GI Y Sbjct: 187 LIELKGFHFHLMSHQLDVSRHLALVQRYFQVVKQWKEQYSLEDLIINLGGGMGINYQDPS 246 Query: 249 RPPSSSDYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + ++ + K+ E GR++ A G V +V+ IK++ + FVI Sbjct: 247 QHFPWIEFCDKLEFLIAEEHMQDWKLRFECGRYISAPCGYYVMEVLDIKQNLGENFVIAR 306 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDR-----LHIHADIVGPICETGDFIALNRKIALP 360 + F P H I N H A++VG +C D +A N+ I Sbjct: 307 GGTHHFRTPAAQSHDHPFAVIHNQQHSTISNPIHHTTANLVGQLCTPKDVLARNQSIEYI 366 Query: 361 RPGDLLYIEKTGAY 374 GD L GAY Sbjct: 367 DIGDYLVFTLAGAY 380 >gi|160902007|ref|YP_001567588.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95] gi|160359651|gb|ABX31265.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95] Length = 390 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 78/403 (19%), Positives = 168/403 (41%), Gaps = 30/403 (7%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + + A ++TPF T +++NY N+ D + YA+KANS+ ++++TL LG+ Sbjct: 7 IREAAKNLETPFLVLDTNYVKENYYKLKNSI--NDVEIFYAVKANSHPSILETLRDLGAS 64 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+ S GE+ + + + +++ F K +I A +G+ F V++E E++ + + A Sbjct: 65 FDVASRGEIEKLMRLGISTDKMSFGNTIKKEKDIKFAWDNGVEYFAVDAEMEVEKIARNA 124 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 ++ S KFG + + + YA G+ GV Sbjct: 125 PGAKVYGRLSMS----------SNDSDWPLSGKFGTDVDHLIEILKYA-KRKGLIPYGVS 173 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 H+GSQ + +A ++ ++L +++ +++GGG+ + + Sbjct: 174 FHVGSQSYNKYKWKEAILNASEVFEKLHKQKIDLKMLNLGGGIPVKHTKPVPEVEEIGEV 233 Query: 258 SL---IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 +++ EPGR +V + GI+ ++V+ + + +V LD + + Sbjct: 234 INESIKEYLGWVDGLRVLSEPGRSMVGNAGIIASRVLLRGRKGTQNWVFLDTGVFHGLME 293 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGA 373 T+ + +E+ + + + GP C++ D I ++ D++Y TGA Sbjct: 294 TIENFRYEVLVEGKEYSETTTM--TLAGPTCDSVDTIYDEIELPIDIDYNDIVYFINTGA 351 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 Y + ++N + V + L+ + + Sbjct: 352 YTNEYATSFNGIEPLKVYTV-----------EDLEALLRNNIL 383 >gi|90426308|ref|YP_534678.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB18] gi|90108322|gb|ABD90359.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB18] Length = 380 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 86/367 (23%), Positives = 145/367 (39%), Gaps = 20/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ +F+ A D+ V YA+KAN V+ LA +GS D S E++ Sbjct: 21 PCLVVDLDVVRDNFQSFAKALP--DSRVFYAVKANPAPEVLSLLASMGSCFDCASVQEIQ 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A +RI F K +I A GI F+V+ +E++ + + A I Sbjct: 79 MALDAGATPDRISFGNTIKKERDIGRAFALGIRLFSVDCTAEVEKIARAAPGAKVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 139 YDCAGA----------EWPLSRKFGCDPEMAVDVLDLAKRLG-LEAYGISFHVGSQQRKV 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A + + + G N+ +++GGG Y + + ++FG Sbjct: 188 KAWDRALAMASSVFRDCAERGINLSMVNMGGGFPTKYLKEVPAVVQYGRSIFRALRKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ T+V+ I +D I Y Sbjct: 248 NAIPETIIEPGRGMVGNAGVIETEVVLISTKSDDDDTRWVYLDIGKFGGLAETMDESIRY 307 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + + GP C++ D + LP GD L IE TGAY + S Sbjct: 308 AIKSRHDGAEMTPCVLAGPTCDSADVMYEKLPYPLPVTLEIGDKLLIEGTGAYTSTYSSV 367 Query: 382 -YNSRLL 387 +N Sbjct: 368 AFNGFPP 374 >gi|242240545|ref|YP_002988726.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech703] gi|242132602|gb|ACS86904.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech703] Length = 392 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 93/355 (26%), Positives = 148/355 (41%), Gaps = 10/355 (2%) Query: 28 PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PF Y Y +A+ + A + YA KAN + A++ TLA G + S GE Sbjct: 19 PFCAYVYDLSALHAHASAMKAALP-PGCELFYAAKANPDAAILTTLADSVDGFEAASGGE 77 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L VP R++F G GK E++ A+ I +VES +EL+ L Q A L Sbjct: 78 LSWLTE-QVPGRRLIFGGPGKLPAELEQAVAQRIDALHVESLNELQRLEQCAERLATPVN 136 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I R+N + T ++ G K FG+ + ++ + A G+K+ G H+ S Sbjct: 137 IMLRMNIPLEGVTGTRLMMGGKPTPFGLDVAELPAAIARIKASRGLKLQGFHFHLMSHQL 196 Query: 206 QIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 ++ + + D Q R + ++VGGG+GI Y R D+ + Q Sbjct: 197 EVATHLSLMRRYLDTVHQWQRQFDIQVPVVNVGGGIGINYLDPQRHFDWQDFCRQLPQVI 256 Query: 265 GN---LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++ E GR++ A G V +V+ +KK+ + F I + F P H Sbjct: 257 AQTGSHGLRLRFECGRYVSAACGYYVMEVLDVKKNLGEWFAIAHGGTHHFRTPAAQGHNH 316 Query: 322 EINYIVNPAGDR--LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + +VG +C D +A + +A PGD L GAY Sbjct: 317 PFSVLRREHLPPTVEQQPITLVGQLCTPKDVLARQQPVAALAPGDWLVFHLAGAY 371 >gi|322790208|gb|EFZ15207.1| hypothetical protein SINV_04085 [Solenopsis invicta] Length = 479 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 80/381 (20%), Positives = 132/381 (34%), Gaps = 20/381 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I + + ++ YA+K N N VI+ LA LG D S+ E+ + Sbjct: 36 FYVLDIGDIVLKHQIWKEKLPRVEP--YYAVKCNDNLIVIEVLAALGINFDCASKNEINK 93 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ V + RI+F+ K I A + V++ESEL + + S I Sbjct: 94 VLSLGVDSSRIIFANPAKPASHIRHAAAVRVETMTVDNESELHKIKKLFPSAKVVIRIRC 153 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 KFG + + + G+ + G H+GS Sbjct: 154 DAEMA----------QCPLGMKFGCDPVREAPNLLHLAYNLGLNVVGFSFHVGSGCQDPP 203 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 F++A + L G +D+GGG + + + +YF Sbjct: 204 VFYRAIHHCKMLFDMATDLGFKPYLLDLGGGYPGDKGTSIDKIAE-VINKALDEYFNTDA 262 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSAD------KTFVILDVAMNDFMRPTLYDAYHE 322 +I EPGRF VA L T + S + ++ + LYD H Sbjct: 263 VHVIAEPGRFYVASAFTLATSIHSKRSIRGDSNAVTHNMYYINDGVYGSFNCLLYDHQHV 322 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + G I + + GP C+ D I N + G+ + E GAY + + Sbjct: 323 TPIPLK-NGCGKMIASSVWGPTCDGLDRIVENIMLHDMELGEWIIFENMGAYTLPVASPF 381 Query: 383 NSRLLIPEIMVNGSQFHIIRP 403 N + +V ++ Sbjct: 382 NGFPIPKVHIVADEDIWLLLK 402 >gi|256395880|ref|YP_003117444.1| Orn/DAP/Arg decarboxylase 2 [Catenulispora acidiphila DSM 44928] gi|256362106|gb|ACU75603.1| Orn/DAP/Arg decarboxylase 2 [Catenulispora acidiphila DSM 44928] Length = 425 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 95/421 (22%), Positives = 176/421 (41%), Gaps = 20/421 (4%) Query: 19 EKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLG 75 + L TP + IE+ A+ + + +A KAN ++ L G Sbjct: 7 QDLLDPHATPVAAFV-DLQGIEQTAAELRAAWPRETEVLHAFAAKANPMVPILALLLRHG 65 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G ++ S GEL +A AA P R+V KT E+ +AL+ GI N+++ EL+ +++ Sbjct: 66 LGCEVSSPGELAQARAAGFPMARVVLDSPAKTQAELAVALRDGIA-LNIDNFEELERVDR 124 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY-ASTLPGVKIS 194 + R+NP + + + +ST + KFGI + + A+ + Sbjct: 125 LVADGAAAVRVGVRINPQVGIGSIEAMSTAGRTTKFGIAMADPGNRQRLLAAYAARPWLR 184 Query: 195 GVDMHIGSQIDQIE-SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 V +H+GSQ +E + + +R + I+ ID+GGGL + + +D P+ Sbjct: 185 WVHVHVGSQGIPLELNAAGVAEAVRFAQEVNARRDGQIEGIDIGGGLPVDFSTDGDSPTF 244 Query: 254 SDYASLIHQYFGNLQ---CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 +D+ +++ L K++ E GR ++ G + ++V K++ + + Sbjct: 245 ADHVAVLRDAAPELFTGGFKVVTEYGRSVMTKNGFIASRVEYTKRTGGRAIALTHAGAQV 304 Query: 311 FMRPTLYDAYHEINYIVNPAGD----RLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 R + + D+ GP C GD +A RK+ D++ Sbjct: 305 AARTVFAPKSWPLRVLAYDRHGLPSTAELEVQDVAGPCCFAGDLVARERKLPRLATEDIV 364 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEIM--VNGS---QFHIIRPRMTFQELIELD-SIPAWL 420 + TGAY YNS + P V+ +FH++R + E++ +PA L Sbjct: 365 VVPDTGAYYFSSPFQYNSLPMPPVFGFEVSDGDVVRFHVLRAAESLDEVVARSGVLPASL 424 Query: 421 Q 421 + Sbjct: 425 R 425 >gi|218961453|ref|YP_001741228.1| Ornithine decarboxylase [Candidatus Cloacamonas acidaminovorans] gi|167730110|emb|CAO81022.1| Ornithine decarboxylase [Candidatus Cloacamonas acidaminovorans] Length = 393 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 88/380 (23%), Positives = 150/380 (39%), Gaps = 19/380 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A + TP + YL + + + YA+KAN VI L LG+ D+ Sbjct: 26 AKDIPTPCLIVDLDIVRNKYLELQASMP--NYKIYYAVKANPMLEVIMLLNELGANFDLA 83 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + L + R+ F K +++I + G+ F +S+ +L L + A Sbjct: 84 SPYELDQMLNLGIEPSRLSFGNTIKKVNDIKYFYEKGVRLFATDSKLDLANLAKYAPGSK 143 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I T + KFG I+ L A+ + ++ G+ H+G Sbjct: 144 VLFRIL----------TEGTGADWPLSRKFGSHPDTIYHLIVKAAKM-NLQPWGISFHVG 192 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASL 259 SQ I + A + L + G ++ I++GGG Y + Sbjct: 193 SQQRDIGQWDDAVARCKYLFDAVAEEGIELKMINIGGGFPANYVDPTFSIQEYATEIQRF 252 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 I + FG+ +IILEPGR LVAD G++V++VI++ + + + Sbjct: 253 ITEDFGDNLPEIILEPGRSLVADAGVIVSEVINVARKSKNNLYQWVYLDIGKFGGLIETI 312 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR---PGDLLYIEKTGAYGA 376 I + + L + GP C++ D + + + +P PGD +YI TGAY Sbjct: 313 DESIKFPIYFPRKGLAEEIILAGPTCDSMDILYEHYRYRMPEGTVPGDRVYIFTTGAYTQ 372 Query: 377 VQSG-TYNSRLLIPEIMVNG 395 S +N + ++ Sbjct: 373 SYSSVNFNGFPPLKAVIFEE 392 >gi|209884063|ref|YP_002287920.1| ornithine decarboxylase [Oligotropha carboxidovorans OM5] gi|209872259|gb|ACI92055.1| ornithine decarboxylase [Oligotropha carboxidovorans OM5] Length = 411 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 89/367 (24%), Positives = 145/367 (39%), Gaps = 20/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY TF+ A D+ V YA+KAN V+ LA LGS D + E+ Sbjct: 52 PCLVVDLDVVRDNYQTFAKALP--DSRVFYAVKANPAPEVLTLLASLGSCFDTATVPEIE 109 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +RI F K ++ A GI F V+ +E++ + + A I Sbjct: 110 MALAAGATPDRISFGNTIKKERDVARAYALGIRLFAVDCTAEVEKIARAAPGAKVFCRIL 169 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 170 YDCAGA----------EWPLSRKFGCDPEMAVDVLDLAKRLG-LEPVGISFHVGSQQRKV 218 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A + + + G N+ +++GGG Y D P + ++FG Sbjct: 219 KAWDRALAMASQVFRDCAERGINLTMVNMGGGFPTKYLKDVPPVVQYGRSIFRALRKHFG 278 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I K +D I Y Sbjct: 279 NQIPETIIEPGRGMVGNAGVIEAEVVLISKKSDDDENRWVYLDIGKFGGLAETMGESIRY 338 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + + GP C++ D + LP GD + IE TGAY + S Sbjct: 339 QIRTRHDGAEMAPCVLAGPTCDSADVLYEKAPYPLPVTLEIGDKVLIEGTGAYTSTYSSV 398 Query: 382 -YNSRLL 387 +N Sbjct: 399 AFNGIPP 405 >gi|190573193|ref|YP_001971038.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Stenotrophomonas maltophilia K279a] gi|190011115|emb|CAQ44724.1| putative lysine-sensitive aspartokinase III [Stenotrophomonas maltophilia K279a] Length = 864 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 112/377 (29%), Positives = 173/377 (45%), Gaps = 18/377 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +LA TP Y Y + A +D YA+KANS+ A+++ L G G Sbjct: 498 LLQLADA-GTPRYVYHLPTVRARARA-LAAIKPIDQR-YYAIKANSHPAILQLLEAEGFG 554 Query: 78 LDIVSEGELRRALAAPV--PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 L+ VS GEL+ +R++F+ E + A + E Q Sbjct: 555 LECVSHGELKHVFQHLPELSPKRVLFTPSFCPRSEYEAAFALDVTVTVDNVE-----ALQ 609 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 R L + + RV+ H K+ TG KE KFG+PI ++ A+ L ++ G Sbjct: 610 RWPDLFRNRELWLRVDLGRGEGHHAKVRTGGKESKFGLPIARVDEFVRAATDLG-SRVVG 668 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + H+GS ++ + + L +++ ++Q ID+GGGL I Y ++ P Sbjct: 669 LHAHLGSGVETAQHWRLMCDELAGFARRIG----SVQTIDIGGGLPIPYSAEDEPFDLDA 724 Query: 256 YASLIHQYFGNLQCKIIL-EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 +A + + + EPGR+LVA+ G+L+T + + V LD MN MRP Sbjct: 725 WAEGLAEVKALHPAFRLAIEPGRYLVAESGVLLTHATQVVEKDGVRRVGLDAGMNALMRP 784 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGA 373 LYDA+H+I + G D+VGPICE+ D RK+ + P D++ I GA Sbjct: 785 ALYDAWHDIENLSRQ-GGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIADAGA 843 Query: 374 YGAVQSGTYNSRLLIPE 390 YG + TYN R+L E Sbjct: 844 YGYSMANTYNQRMLPRE 860 >gi|152149342|pdb|2PLJ|A Chain A, Crystal Structure Of LysineORNITHINE DECARBOXYLASE Complexed With Putrescine From Vibrio Vulnificus gi|152149343|pdb|2PLJ|B Chain B, Crystal Structure Of LysineORNITHINE DECARBOXYLASE Complexed With Putrescine From Vibrio Vulnificus gi|152149344|pdb|2PLK|A Chain A, Crystal Structure Of LysineORNITHINE DECARBOXYLASE Complexed With Cadaverine From Vibrio Vulnificus gi|152149345|pdb|2PLK|B Chain B, Crystal Structure Of LysineORNITHINE DECARBOXYLASE Complexed With Cadaverine From Vibrio Vulnificus Length = 419 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 82/388 (21%), Positives = 142/388 (36%), Gaps = 17/388 (4%) Query: 10 SLHAENVSLEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 L AE + L + P I + Y NA + + YALK + V+ Sbjct: 37 VLSAEEIHLIEASVEQFGAPLLLLDCDVIRQQYRALKNALP--NVTLHYALKPLPHPVVV 94 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 +TL G+ D+ + GE+ + VPA+ + + K +I AL G F V++ + Sbjct: 95 RTLLAEGASFDLATTGEVELVASEGVPADLTIHTHPIKRDADIRDALAYGCNVFVVDNLN 154 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 EL+ + ++FR + KFG Q + A Sbjct: 155 ELEKFKAYRDDVELLVRLSFRNSEAF----------ADLSKKFGCSPEQALVIIETAKEW 204 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 ++I G+ H+GSQ + +A R + +Q+ G GG ++ Sbjct: 205 -NIRIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVNYTQQ 263 Query: 249 RPPSSSDYASLIHQYFG-NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 P A + ++ EPGRF+ A V V+ + + + LD Sbjct: 264 VMPIDQFCAPINEALSLLPETVHVLAEPGRFICAPAVTSVASVMGQAEREGQIWYYLDDG 323 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 + ++D + G+ I + + GP C++ D IA N + GDL+ Sbjct: 324 IYGSFSGLMFDDARYPLTTIKQGGE--LIPSVLSGPTCDSVDVIAENILLPKLNNGDLVI 381 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 GAY + + +N I +N Sbjct: 382 GRTMGAYTSATATDFNFFKRAQTIALNE 409 >gi|27367421|ref|NP_762948.1| Ornithine decarboxylase [Vibrio vulnificus CMCP6] gi|27358990|gb|AAO07938.1| Ornithine decarboxylase [Vibrio vulnificus CMCP6] Length = 399 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 82/388 (21%), Positives = 142/388 (36%), Gaps = 17/388 (4%) Query: 10 SLHAENVSLEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 L AE + L + P I + Y NA + + YALK + V+ Sbjct: 17 VLSAEEIHLIEASVEQFGAPLLLLDCDVIRQQYRALKNALP--NVTLHYALKPLPHPVVV 74 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 +TL G+ D+ + GE+ + VPA+ + + K +I AL G F V++ + Sbjct: 75 RTLLAEGASFDLATTGEVELVASEGVPADLTIHTHPIKRDADIRDALAYGCNVFVVDNLN 134 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 EL+ + ++FR + KFG Q + A Sbjct: 135 ELEKFKAYRDDVELLVRLSFRNSEAF----------ADLSKKFGCSPEQALVIIETAKEW 184 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 ++I G+ H+GSQ + +A R + +Q+ G GG ++ Sbjct: 185 -NIRIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVNYTQQ 243 Query: 249 RPPSSSDYASLIHQYFG-NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 P A + ++ EPGRF+ A V V+ + + + LD Sbjct: 244 VMPIDQFCAPINEALSLLPETVHVLAEPGRFICAPAVTSVASVMGQAEREGQIWYYLDDG 303 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 + ++D + G+ I + + GP C++ D IA N + GDL+ Sbjct: 304 IYGSFSGLMFDDARYPLTTIKQGGE--LIPSVLSGPTCDSVDVIAENILLPKLNNGDLVI 361 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 GAY + + +N I +N Sbjct: 362 GRTMGAYTSATATDFNFFKRAQTIALNE 389 >gi|259013291|ref|NP_001158445.1| ornithine decarboxylase 1 [Saccoglossus kowalevskii] gi|196475493|gb|ACG76357.1| ornithine decarboxylase [Saccoglossus kowalevskii] Length = 493 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 77/389 (19%), Positives = 126/389 (32%), Gaps = 42/389 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I + + YA+K N N AV++ LA LG+G D S+ E++ Sbjct: 43 FFVMDFGDIVNKFEKWEALLPR--VHPFYAVKCNENPAVLRLLAALGTGFDCASKSEIKE 100 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V RIV++ K + A Q + ++E EL+ + + I Sbjct: 101 ITDMGVSPSRIVYANPCKPNSHLKFAAQRKVSLMTFDNEMELQKIRKIYPDAELVLRIL- 159 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + K+G SL A L + GV H+GS Sbjct: 160 ---------TDDSTAQCQLGLKYGCHPQHAPSLLRVAKELGL-NVVGVSFHVGSGCRDAS 209 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F A + R + + G + Q +D+GGG + + + + Sbjct: 210 AFSDAIQSSRMVFDYGSALGFDFQLLDIGGGYPGQSSAAISFEEMAGCINQALDVHFPEG 269 Query: 267 LQCKIILEPGRFLVADVGILVTKVIS---------------------------IKKSADK 299 +II EPGR+ VA L VI+ Sbjct: 270 CGVRIISEPGRYFVASAFTLTLNVIAKRAVARDIQTFHVPGSEDLVANTVAPSQCDEPAY 329 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + D F A + + + + + GP C+ D I N + Sbjct: 330 MYYCNDGVYGSFNCLLFDHATVQPSLLKKMLLGEPKFASSLWGPSCDGLDRIMENCLLPE 389 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 GD + E GAY + T+N Sbjct: 390 LHVGDWIVFEDMGAYTMCAASTFNGFPKP 418 >gi|134058520|emb|CAL00729.1| unnamed protein product [Aspergillus niger] Length = 450 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 86/374 (22%), Positives = 141/374 (37%), Gaps = 34/374 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + +L + YA+K N + +++ +A LG+G D S+ E+ Sbjct: 74 PFYVADMGEVYRQHLRWKMNLSR--VRPFYAVKCNPDPEILRLMAKLGNGFDCASKAEID 131 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL V RI+++ KT + A Q G+ ++ EL + I Sbjct: 132 MALETGVDPSRIIYAQPCKTKSYLRYAAQVGVKQMTFDNADELYKIKANYPDAELYLRIL 191 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + L A L +K+ GV H+GS + Sbjct: 192 ----------TDDSNSLCQFSMKFGASLDVARQLLELAHQLE-LKVVGVSFHVGSGAEDP 240 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++F KA + R + Q GH + +DVGGG S + + Sbjct: 241 KAFLKAVQDARLVFDQAAEIGHELHTLDVGGGFSQDTFEKFAGVLSEAL-----ETYFPP 295 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM-------NDFMRPTLYDAY 320 ++I EPGR+ VA+ L +I+ ++ D D M ++D Sbjct: 296 NIRVIAEPGRYYVANAFTLAANIIARREVRDPEDPANDAYMLYLNDGVYGNFSNIIFDHQ 355 Query: 321 HEINYIVNPAGDRLH--------IHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKT 371 H + ++ A + I GP C+ D I+ + L GD LY E+ Sbjct: 356 HPVAQVLTCASAANSPYAATSGGVTYSIWGPTCDGIDVISKRIALPALLEVGDWLYFEEM 415 Query: 372 GAYGAVQSGTYNSR 385 GAY + +N Sbjct: 416 GAYTKCSATRFNGF 429 >gi|1749562|dbj|BAA13839.1| unnamed protein product [Schizosaccharomyces pombe] Length = 363 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 84/378 (22%), Positives = 140/378 (37%), Gaps = 29/378 (7%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 + + + L + YA+K N + V+ L G+GLD S+GEL + Sbjct: 1 FVADLNGVYRQLLRWHAKLPR--VQPFYAVKCNPDPKVLALLNKFGTGLDCASKGELEQI 58 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L V +RIV++ K I + A GI ++ EL + Q + I Sbjct: 59 LGLGVSPDRIVYANPCKAITYVRYAASKGINLMTFDNADELYKVKQHHPNSRLLLRI--- 115 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 +T S + KFG + L A +L + + GV H+GS + Sbjct: 116 -------STDDSNSLCRLSLKFGASLDDTGKLLDIAKSLE-LNVVGVSFHVGSGSYDPSA 167 Query: 210 FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC 269 F A + R + Q G N +D+GGG S + + Sbjct: 168 FLDAIQRSRQVFDQGLERGFNFDLLDIGGGFMNDSFDGVADLIRSAL-----DTYFDPSI 222 Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKT--FVILDVAMNDFMRPTLYDAYHEINYIV 327 ++I EPGRF V+ L VI+ +K D+ ++ + + L+D H + ++ Sbjct: 223 RVISEPGRFFVSSSFTLAVNVIAKRKLDDEEKVMYYVNDGVYGSLNCILFDHQHPVARVL 282 Query: 328 NPAG--------DRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQ 378 I GP C++ D IA + + P GD +Y E GAY Sbjct: 283 KCGSRFVYNDLVGTGQHRCFIWGPTCDSLDVIANDAHLPYEPNVGDWIYFEDAGAYTVAA 342 Query: 379 SGTYNSRLLIPEIMVNGS 396 + +N + ++ Sbjct: 343 ASCFNGFKTSRIVYLDTD 360 >gi|74141603|dbj|BAE38566.1| unnamed protein product [Mus musculus] Length = 461 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 143/382 (37%), Gaps = 30/382 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++ TLA +G+G D + E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRAIVSTLAAIGTGFDCAXQTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPAER++++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + + Sbjct: 207 TFVQAVSDARCVFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAMNDF 311 +II EPGR+ VA L +I+ K + + D F Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A+ + P D + + I GP C+ D I + GD + E Sbjct: 327 NCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENM 386 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 GAY + T+N V Sbjct: 387 GAYTVAAASTFNGFQRPNIYYV 408 >gi|195383336|ref|XP_002050382.1| GJ22122 [Drosophila virilis] gi|194145179|gb|EDW61575.1| GJ22122 [Drosophila virilis] Length = 392 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 86/394 (21%), Positives = 160/394 (40%), Gaps = 20/394 (5%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 S Y+E L V E +++E+ + + + YA+K Sbjct: 4 SGINYYEHVLDIRRVIEEAQVQNCDEALNICDLSSVERKFRLWQQQLPRIKP--YYAVKC 61 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N + +++TLA LG G D S+ EL+ L V ERI+F+ + I +D A Q + Sbjct: 62 NDDSRIVQTLAGLGVGFDCASKNELKLVLDCDVSPERIIFANPCRPISHLDYAKQRQVLK 121 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 V++E E+ L++ N + + K + DKFG S Sbjct: 122 GTVDNEFEIYKLHKHYP----------NSNLIVRFKSEAKAAQCPLGDKFGCDADIDASA 171 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 + + ++G H+GS ++E++ +A K +++ + G++++ +D+GGG Sbjct: 172 LMLLAKALDLTVTGTSFHVGSGCTELEAYERAIKKAKNIFKFGELLGYDLKLLDIGGGFP 231 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK-- 299 + ++ + + ++F + + +II EPGRF VA LV K+ + ++ + Sbjct: 232 GSDDEQFVKIAA-NVNRAVQRHFADERIEIIAEPGRFFVAAAYTLVCKIHAKREVRNAAG 290 Query: 300 -----TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + + D F + + A + I GP C+ D I+ N Sbjct: 291 KLDTVMYYLNDGVYGSFNCILYDHQLVTAQHYLEGAESLPTFKSLIWGPSCDALDKISEN 350 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 ++ GDLL GAY + +N L Sbjct: 351 LRLPNLNRGDLLGFPNMGAYTVPIASAFNGFPLP 384 >gi|307250856|ref|ZP_07532784.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857106|gb|EFM89234.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 201 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 85/197 (43%), Positives = 119/197 (60%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE+VS+ + + TP Y YS +E+ + F AF ++C+A+K Sbjct: 1 MNHFNYKNQQLFAEDVSVSDIINQYGTPAYIYSRATLERRWHAFDKAFGSHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + + Sbjct: 121 CFNIESIAELHRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTNEGN 180 Query: 181 LYAYASTLPGVKISGVD 197 Y + Sbjct: 181 KYWEKRYEKKHRRKTYC 197 >gi|333026994|ref|ZP_08455058.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071] gi|332746846|gb|EGJ77287.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071] Length = 494 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 96/397 (24%), Positives = 159/397 (40%), Gaps = 17/397 (4%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVC-YALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 T + + AF G ++ +A+KA S V++ L G G ++ S GEL A Sbjct: 78 VDVTGVREAARELRAAFAGPAPVLHTFAVKAASLVPVLELLNEEGVGCEVASPGELELAR 137 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 AA VPA RIV KT+ E+ AL GI N ++ EL ++ +P+ RV Sbjct: 138 AAGVPASRIVLDSPAKTVAELRDALAHGIA-VNADNPQELARIDALLAEGPTDSPLGVRV 196 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL-PGVKISGVDMHIGSQIDQIES 209 NP + + +ST KFG+ + + ++ + H GSQ +E Sbjct: 197 NPQVGTGSIGAMSTATATSKFGVALRDPGAEDWLVRQYVERPWLTRLHTHTGSQGVALEL 256 Query: 210 FHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF--- 264 ++ +++ L +++ + ID+GGGL + + + P + YA L+ + Sbjct: 257 MAESVRIVYGLAERINREVGRQQVDTIDIGGGLPVNFEGEEITPRFAAYAKLLRETVPGL 316 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + + I+ E GR L+A G + V K S + + R + Sbjct: 317 FDGRYTIVTEFGRSLLAKQGFVAALVEYTKTSGGRRIAVTHAGAQVATRTVFVPDSWPLR 376 Query: 325 YIVNPAG----DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + + + D+ GP C GD +A R + PGDL+ + TGAY Sbjct: 377 VAAFASDGTLKESPDLVQDVAGPCCFAGDLVARARTLPELSPGDLIALWDTGAYYFSTHF 436 Query: 381 TYNSRLLIPEIMVNGS-----QFHIIRPRMTFQELIE 412 YNS +F IR + EL+ Sbjct: 437 AYNSLPRPAVHGFWTDDEGRTRFATIRRGQSLAELLA 473 >gi|223995827|ref|XP_002287587.1| ornithine decarboxylase [Thalassiosira pseudonana CCMP1335] gi|220976703|gb|EED95030.1| ornithine decarboxylase [Thalassiosira pseudonana CCMP1335] Length = 386 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 81/390 (20%), Positives = 139/390 (35%), Gaps = 45/390 (11%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + AF + YA+K N + +++TLA LG D S GE+ Sbjct: 1 FYVVDLGIVGAQLARWRAAFPR--VVPYYAIKCNPDPVIVRTLASLGCNFDCASRGEIEI 58 Query: 89 ALAAPV------PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 P IV++ K I A+ G+ ++ +E++ + + Sbjct: 59 VQQVSRGLPSGIPKPEIVYANPCKGRGHIIDAVCRGVRMMTFDNVAEVQKCAAVSRKIQL 118 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I T S + KFG P L A A ++ GV H+GS Sbjct: 119 IMRII----------TDDSGSQCRLSSKFGAPKQHWPILLAEAKKFGL-EVVGVSFHVGS 167 Query: 203 QIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD------ 255 + A K ++L + R G ++ +D+GGG H+ + Sbjct: 168 GCRDATRYEMALKDCKELFEVAKRDYGFDMNILDIGGGFPGETHNKGNQYMYFNEIAAAV 227 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 L + + K+I EPGR+LVA LV V+S++++A V +A + Sbjct: 228 APMLDELFPPSSGVKLIAEPGRYLVAASSTLVASVVSVREAAVSGIVRQAIADSVQPLQD 287 Query: 316 LYDAYHEINYIVNPAG-------------------DRLHIHADIVGPICETGDFIALNRK 356 + Y D + + GP C++ D ++ Sbjct: 288 DFAYYINDGVYGAFNNLLFDHATVVDEEADETSPQDETLYPSTVFGPTCDSMDVLSRGVL 347 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + GD +Y + GAY + + T+N Sbjct: 348 LPKMAVGDWMYFQNMGAYTSAAASTFNGFP 377 >gi|158421957|ref|YP_001523249.1| ornithine decarboxylase [Azorhizobium caulinodans ORS 571] gi|158328846|dbj|BAF86331.1| ornithine decarboxylase [Azorhizobium caulinodans ORS 571] Length = 376 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 90/373 (24%), Positives = 147/373 (39%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY F+ A DT V YA+KAN + A++K LA LGS D S E+ Sbjct: 17 PCVVVDLDVVRANYTAFARALP--DTRVFYAVKANPDAAILKALAELGSCFDCASVQEIE 74 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A +RI F K +I+ A + G+ F V+ E++ + + A I Sbjct: 75 MALFAGATPDRISFGNTIKKERDIERAYKIGVRLFAVDCYEEVEKIARVAPGARVFCRIL 134 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 A KFG + +A L GV H+GSQ + Sbjct: 135 CD-----GAGA-----EWPLSRKFGCVPEMAPDVLEHAFRLGLS-PYGVSFHVGSQQKNV 183 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 ++ +A + ++ G ++ +++GGG Y D + + ++FG Sbjct: 184 HAWDQALGSAAYIFRECAVRGISLSMVNLGGGFPTKYLQDVPKAQAYGEAIFDSLRRHFG 243 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + GI+ T+V+ I K A+ + I Y Sbjct: 244 NAIPETIMEPGRGMVGNAGIIETEVVLISKKAESDTMRWVYLDIGKFGGLAETMDEAIRY 303 Query: 326 IVNPAGDR-LHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 + D + GP C++ D + ++ L GD + IE GAY S Sbjct: 304 PLRTPRDGDDTAPCVLAGPTCDSADVLYEKTPVELPLSLSIGDKVLIEACGAYTTTYSAV 363 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 364 AFNGFPPLKSYVI 376 >gi|218676892|ref|YP_002395711.1| Vibrioferrin biosynthesis protein PvsE [Vibrio splendidus LGP32] gi|218325160|emb|CAV27052.1| Vibrioferrin biosynthesis protein PvsE [Vibrio splendidus LGP32] Length = 400 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 89/368 (24%), Positives = 156/368 (42%), Gaps = 13/368 (3%) Query: 18 LEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 ++KLA P Y Y A+E + + + + YA KAN + +++TLA Sbjct: 15 IQKLAKQQTQPLCAYLYDLDALELHIKQMRHVLPK-NVELFYAAKANPSTPILRTLAPYV 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S GEL + + ++F G GK + E++ A++ + +VES +ELK + Sbjct: 74 DGFEAASGGELTHLHQQQLN-KPLIFGGPGKMLSELEQAIELDVEAIHVESLTELKRIGS 132 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 L + A I R+N DI T K++ G K FG+ ++ + Y P +K+ G Sbjct: 133 LTQKLNRPASIFLRMNIDIGDITLSKLAMGGKPTPFGLDESELSNALMYLRDFPLIKLKG 192 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGIAYHSDHRPPSSS 254 H+ S ++ + + ++ + + I++GGG+GI Y + + Sbjct: 193 FHFHLMSHQLDVDRHLALMQRYFQVVKEWKKTFSLDELIINLGGGMGINYQNPKQHFPWM 252 Query: 255 DYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ + K+ E GR++ A G V +V+ IKK+ + FVI + F Sbjct: 253 EFCDKLEFLISKEHLQDWKLRFECGRYISAPCGYYVMEVLDIKKNLGEHFVIARGGTHHF 312 Query: 312 MRPTLYDAYHEIN-----YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 P H + A +VG +C D +A ++ IA GD + Sbjct: 313 RTPAAQSHDHPFAIVKSKQHPTISNPIDQTTATLVGQLCTPKDVLARSQNIAHIDIGDYV 372 Query: 367 YIEKTGAY 374 GAY Sbjct: 373 VFTLAGAY 380 >gi|194863622|ref|XP_001970531.1| GG23324 [Drosophila erecta] gi|190662398|gb|EDV59590.1| GG23324 [Drosophila erecta] Length = 399 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 84/393 (21%), Positives = 153/393 (38%), Gaps = 28/393 (7%) Query: 4 FKYFEGSLHAENV----SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 +Y+E L V L+ L + +E+ + ++ YA+ Sbjct: 8 IQYYENDLDIHKVIEQADLQNLDQA----LNICDLSNLERKLRLWHKLMPRIEP--HYAV 61 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K N + V+K LA LG+G D S+ EL+ L V ERI+F+ + + A + + Sbjct: 62 KCNDDPVVVKVLADLGTGFDCASKNELKLVLGLGVSPERIIFAHPCRPASHLKYAKEQQV 121 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 V++E E+ L + N I + K + DK+G Sbjct: 122 VNGTVDNEFEVYKLRKHHP----------DSNLIIRFKSEAKKALCPLGDKYGCDAETDA 171 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + + +K++G H+GS ++E++ +A + + + GH ++ +DVGGG Sbjct: 172 AALMLLAKALDLKVTGTSFHVGSGCSEVEAYDRAIEKAESIFKVGELIGHKMELLDVGGG 231 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS--- 296 A + + + + F + + +II EPGRF V L+ KV + ++ Sbjct: 232 FPGA-DDEMFEEIAHAVNTSVKLRFPDERVRIISEPGRFFVEAAYTLICKVHAKREVRSQ 290 Query: 297 ----ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + + D F Y ++ A + + + GP C+ D I+ Sbjct: 291 DGKLDSMMYYLNDGIFGAFAGMFYYPEEMAPELYLDEAASLPKLKSVLWGPSCDALDKIS 350 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + PGDLL GAY + +N Sbjct: 351 GHLLLPSLNPGDLLGFRNMGAYTMPIASPFNGF 383 >gi|318058551|ref|ZP_07977274.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actG] gi|318080248|ref|ZP_07987580.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actF] Length = 448 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 94/398 (23%), Positives = 149/398 (37%), Gaps = 19/398 (4%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVC-YALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 T + + AF G ++ +A+KA S V++ L G G ++ S GEL A Sbjct: 32 VDVTGVREAARELRAAFAGPAPVLHTFAVKAASLVPVLELLNEEGVGCEVASPGELELAR 91 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 AA VPA RIV KT+ E+ AL GI N ++ EL ++ +P+ RV Sbjct: 92 AAGVPASRIVLDSPAKTVAELRDALAHGIA-VNADNPQELARVDALLAEGPTDSPLGVRV 150 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 NP + + +ST KFG+ + + + +H + + Sbjct: 151 NPQVGTGSIGAMSTATATSKFGVALR-DPGAEDWLVRQYVERPWLTRLHTHTGSQGVALE 209 Query: 211 HKAFKLLRDLTQQLRSNG----HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF-- 264 A + R N + ID+GGGL + + + P + YA L+ + Sbjct: 210 LMAESVRIVYGLAERINREVGGQQVDTIDIGGGLPVNFEGEEITPRFAAYAKLLRETVPG 269 Query: 265 -GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + + I+ E GR L+A G + V K S + + R + Sbjct: 270 LFDGRYTIVTEFGRSLLAKQGFVAALVEYTKTSGGRRIAVTHAGAQVATRTVFVPDSWPL 329 Query: 324 NY----IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + + D+ GP C GD +A R + PGDL+ + TGAY Sbjct: 330 RVAAFAPDGTLKESPDLVQDVAGPCCFAGDLVARARTLPELSPGDLIALWDTGAYYFSTH 389 Query: 380 GTYNSRLLIPEIMVNGS-----QFHIIRPRMTFQELIE 412 YNS +F IR + EL+ Sbjct: 390 FAYNSLPRPAVHGFWTDDEGRTRFATIRRGQSLAELLA 427 >gi|114576089|ref|XP_001157142.1| PREDICTED: ornithine decarboxylase 1 isoform 7 [Pan troglodytes] Length = 472 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 86/393 (21%), Positives = 143/393 (36%), Gaps = 41/393 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK--------------------------SADKT 300 +II EPGR+ VA L +I+ K Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDGMYKGRITSCITENESSEQTFM 326 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 + + D F A+ + P D + + I GP C+ D I + Sbjct: 327 YYVNDGVYGSFNCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEM 386 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 GD + E GAY + T+N V Sbjct: 387 HVGDWMLFENMGAYTVAAASTFNGFQRPTIYYV 419 >gi|24586474|ref|NP_477053.2| ornithine decarboxylase 2 [Drosophila melanogaster] gi|66774204|sp|P40808|DCOR2_DROME RecName: Full=Ornithine decarboxylase 2; Short=ODC; AltName: Full=dODC2 gi|21627754|gb|AAF59149.2| ornithine decarboxylase 2 [Drosophila melanogaster] Length = 393 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 84/393 (21%), Positives = 156/393 (39%), Gaps = 29/393 (7%) Query: 4 FKYFEGSLHAENV----SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 +Y++ L+ V LE L +++E+ + ++ YA+ Sbjct: 8 IQYYDEELNIRKVIEQADLEHLDQA----LNICDLSSLERKLRLWHKLMPRIEP--HYAV 61 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K N + V+K LA LG+G D S+ EL+ L V ERI+F+ + + A + + Sbjct: 62 KCNDDPVVVKFLADLGTGFDCASKNELKLVLGLGVSPERIIFAHPCRPASHLRYAKEQQV 121 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 V++E E+ L + N + + K + DK+G Sbjct: 122 VNGTVDNEYEIYKLRKHYP----------DSNLIVRFKSEAKKALCPLGDKYGCDAEADA 171 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + + G+K++G H+GS ++E++ +A + ++ + GH ++ +DVGGG Sbjct: 172 AALMLLAKALGLKVTGTSFHVGSGCSEVEAYDRAIEKAENIFKVGEMIGHKMELLDVGGG 231 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD- 298 + + + + F + + +II EPGRF V L+ KV + ++ Sbjct: 232 FPG-IDDEMFEEIAQSVNTSVELRFPDKRIRIISEPGRFFVEAAYTLICKVHAKREVRSK 290 Query: 299 ------KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + + D F Y ++ A + + I GP C+ D I+ Sbjct: 291 DGKLDTMMYYLNDGIFGAFAGMFYYPEEVAPELYLDEAESLPKLKSVIWGPSCDAMDKIS 350 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + PGDLL GAY + +N Sbjct: 351 -DLLLPNLNPGDLLGFRNMGAYTMPIASPFNGF 382 >gi|302519173|ref|ZP_07271515.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78] gi|302428068|gb|EFK99883.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78] Length = 472 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 93/398 (23%), Positives = 148/398 (37%), Gaps = 19/398 (4%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVC-YALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 T + + AF G ++ +A+KA S V++ L G G ++ S GEL A Sbjct: 56 VDVTGVREAARELRAAFAGPAPVLHTFAVKAASLVPVLELLNEEGVGCEVASPGELELAR 115 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 AA VPA RIV K + E+ AL GI N ++ EL ++ +P+ RV Sbjct: 116 AAGVPASRIVLDSPAKAVAELRDALAHGIA-VNADNPQELARVDALLAEGPTDSPLGVRV 174 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 NP + + +ST KFG+ + + + +H + + Sbjct: 175 NPQVGTGSIGAMSTATATSKFGVALR-DPGAEDWLVRQYVERPWLTRLHTHTGSQGVALE 233 Query: 211 HKAFKLLRDLTQQLRSNG----HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF-- 264 A + R N + ID+GGGL + + + P + YA L+ + Sbjct: 234 LMAESVRIVYGLAERINREVGGQQVDTIDIGGGLPVNFEGEEITPRFAAYAKLLRETVPG 293 Query: 265 -GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + + I+ E GR L+A G + V K S + + R + Sbjct: 294 LFDGRYTIVTEFGRSLLAKQGFVAALVEYTKTSGGRRIAVTHAGAQVATRTVFVPDSWPL 353 Query: 324 NY----IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + + D+ GP C GD +A R + PGDL+ + TGAY Sbjct: 354 RVAAFAPDGTLKESPDLVQDVAGPCCFAGDLVARARTLPELSPGDLIALWDTGAYYFSTH 413 Query: 380 GTYNSRLLIPEIMVNGS-----QFHIIRPRMTFQELIE 412 YNS +F IR + EL+ Sbjct: 414 FAYNSLPRPAVHGFWTDDEGRTRFATIRRGQSLAELLA 451 >gi|28627544|gb|AAL83709.1| putative ornithine decarboxylase 1 [Capsicum annuum] Length = 435 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 70/372 (18%), Positives = 124/372 (33%), Gaps = 21/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + ++ A + YA+K N + + LA +GS D S E+ Sbjct: 68 PFYVLDLGEVVSLMDQWNVALP--NVHPFYAVKCNPEPSFLSMLAAMGSNFDCASRAEIE 125 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + ERIVF+ K +I A + G+ +SE E+ + + I Sbjct: 126 YVLSLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPKCELLLRI- 184 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + + + + + +SGV HIGS Sbjct: 185 ---------KPMNDGNARCPMGPKYGALPEEIEPLLRIAQASRLTVSGVSFHIGSGDADS 235 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ A + + + G + ++ GG + H ++ A H + Sbjct: 236 NAYLGAIAAAKQVFETAAKFGMSKMNVLDIGGGFTSGHQFTTAATAVKSALQQH-FSNEP 294 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + II EPGRF L T +I + D ++ + M LYD + Sbjct: 295 ELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYWINDGLYGSMNCVLYDHATVTATPL 354 Query: 328 NPAGDR--------LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +R + I GP C+ D + + ++ + D L GAY Sbjct: 355 ACMSNRVNLNCSGSKMFPSTIFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAG 414 Query: 380 GTYNSRLLIPEI 391 +N + Sbjct: 415 SNFNGFNTSAIV 426 >gi|315658303|ref|ZP_07911175.1| diaminopimelate decarboxylase [Staphylococcus lugdunensis M23590] gi|315496632|gb|EFU84955.1| diaminopimelate decarboxylase [Staphylococcus lugdunensis M23590] Length = 353 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 102/360 (28%), Positives = 169/360 (46%), Gaps = 19/360 (5%) Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 ++K + G LD+VSEGEL AL+A ++I F G KT EI L++GI F V++ Sbjct: 1 MVKLVQEEGLQLDVVSEGELYTALSAGFDPKQIHFHGNNKTKREIQYGLENGIGYFVVDA 60 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--Y 184 E++ +++ A + RVNP + A+TH+ I TG+++ KFG+ I +L A Sbjct: 61 LEEIELIDKYA---SDTVNVVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKYGLALEAVNK 117 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 + + G+ H+GSQI+ E+ + K++ + + ++ +++GGG GI Y Sbjct: 118 IKASKHLYLKGIHFHVGSQIEGTEAMIETAKIVLNWLSE---QQIQVELLNLGGGFGIKY 174 Query: 245 HSDHRPPSS-------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + I + +I +EPGR +V + GI + +V +IK Sbjct: 175 VEGDTSFPIEEGIAEITTAIKDITKELNYSVPEIGIEPGRSIVGEAGITLYEVGTIKDIP 234 Query: 298 DKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +D M+D +R LYDA +E + + I G +CE+GD I N K Sbjct: 235 GVNKYVSIDGGMSDHIRTALYDAQYEALLVNRH--ESADETVTISGKLCESGDIIIRNAK 292 Query: 357 IAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + GD+L I TGAY S YN + + + R + ++LI D+ Sbjct: 293 LPSSVHRGDILAILSTGAYHYSMSSNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIINDT 352 >gi|474032|emb|CAA47166.1| ornithine decarboxylase [Drosophila melanogaster] Length = 393 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 83/393 (21%), Positives = 156/393 (39%), Gaps = 29/393 (7%) Query: 4 FKYFEGSLHAENV----SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 +Y++ L+ V LE L +++E+ + ++ YA+ Sbjct: 8 IQYYDEELNIRKVIEQADLEHLDQA----LNICDLSSLERKLRLWHKLMPRIEP--HYAV 61 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K N + V+K LA LG+G D S+ EL+ L V ERI+F+ + + A + + Sbjct: 62 KCNDDPVVVKFLADLGTGFDCASKNELKLVLGFGVSPERIIFAHPCRPASHLRYAKEQQV 121 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 V++E E+ L + + + + K + DK+G Sbjct: 122 VNGTVDNEYEIYKLRKHYP----------DSSLIVRFKSEAKKALCPLGDKYGCDAEADA 171 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + + G+K++G H+GS ++E++ +A + ++ + GH ++ +DVGGG Sbjct: 172 AALMLLAKALGLKVTGTSFHVGSGCSEVEAYDRAIEKAENIFKVGEMIGHKMELLDVGGG 231 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD- 298 + + + + F + + +II EPGRF V L+ KV + ++ Sbjct: 232 FPG-IDDEMFKEIAQSVNTSVELRFPDKRIRIISEPGRFFVEAAYTLICKVHAKREVRSK 290 Query: 299 ------KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + + D F Y ++ A + + I GP C+ D I+ Sbjct: 291 DGKLDTMMYYLNDGIFGAFAGMFYYPEEVAPELYLDEAESLPKLKSVIWGPSCDALDKIS 350 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + PGDLL GAY + +N Sbjct: 351 -DLLLPNLNPGDLLGFRNMGAYTMPIASPFNGF 382 >gi|307262063|ref|ZP_07543717.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|45825285|gb|AAS77492.1| unknown [Actinobacillus pleuropneumoniae] gi|306868242|gb|EFN00065.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 201 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 85/197 (43%), Positives = 120/197 (60%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE+VS+ + + TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MNHFNYKNQQLFAEDVSVSDIINQYGTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGKPSKVVFSGVAKSHSEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + + Sbjct: 121 CFNIESIAELHRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTNEGN 180 Query: 181 LYAYASTLPGVKISGVD 197 Y + Sbjct: 181 KYWEKRYEKKHRRKTYC 197 >gi|301166995|emb|CBW26574.1| putative diaminopimelate decarboxylase [Bacteriovorax marinus SJ] Length = 405 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 84/383 (21%), Positives = 158/383 (41%), Gaps = 10/383 (2%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L+++ + + FY Y ++ + + D + YA KAN A++K +L G Sbjct: 15 LKRVIKRLDSSFYFYDLDGLKDHLSYMRDTRDDS-IKLWYACKANPMSAILKIFRNLDFG 73 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD+ S+GEL + L+A + E I+ +G K+ + + + + +ES ++ L++ A Sbjct: 74 LDVASQGELEQVLSAGILPEDILSTGPSKSRKYLRSMIINEVNVVVLESLNQAYWLDEIA 133 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 LG + + RV D + K + G + FG+ + L + G Sbjct: 134 RELGARPKVLLRVQLDWDEG--KSVLGGDEITPFGLDEKEWLKLDKSKCQ--NLDFKGFH 189 Query: 198 MHIGSQIDQIESFHKAFK-LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + ++ + ++ + L + +++ ID+GGGLGI Y ++ P D Sbjct: 190 VFQWGNLLELSRLERIWRGTIVSLQDLSKKMDIDMEVIDLGGGLGIPYAANETPLDFKDV 249 Query: 257 ASL-IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 SL + I +E GR+ G +++VI K + ++LD +N RP Sbjct: 250 NSLLVKLRDEYKLQTIWMELGRYCTGPYGHYLSQVIDKKVVRGRDILVLDGGINHIARPA 309 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 L D D + GP+C D + + GD L + GAYG Sbjct: 310 LTDQAFPCEMFRE--SDAKTKEFTVHGPLCTALDKLGTFQLPEDIDEGDWLVFSQAGAYG 367 Query: 376 AVQSGT-YNSRLLIPEIMVNGSQ 397 ++ + L E+++ Sbjct: 368 FTEAMPFFLCHNLPAEVILYNGD 390 >gi|145628393|ref|ZP_01784194.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.1-21] gi|144980168|gb|EDJ89827.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.1-21] Length = 205 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 94/192 (48%), Positives = 133/192 (69%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F+Y L+AE++ +++LA TP Y YS +E+++ F +AF ++C+A+K Sbjct: 1 MNFFQYKHNKLYAEDIPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + SN V+ +A LGSG DIVS+GEL R LAA A ++VFSGV K+ +EI AL+ GI Sbjct: 61 SCSNIGVLNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFNVES SELK +NQ A +GK API+ RVNPD++A+TH ISTG KE+KFG+ +++ Sbjct: 121 CFNVESVSELKHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARE 180 Query: 181 LYAYASTLPGVK 192 +Y ASTLP +K Sbjct: 181 VYKLASTLPNIK 192 >gi|316932414|ref|YP_004107396.1| Orn/DAP/Arg decarboxylase 2 [Rhodopseudomonas palustris DX-1] gi|315600128|gb|ADU42663.1| Orn/DAP/Arg decarboxylase 2 [Rhodopseudomonas palustris DX-1] Length = 380 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 90/369 (24%), Positives = 150/369 (40%), Gaps = 20/369 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N++ F+ A D+ V YA+KAN V+ LA LGS D S E++ Sbjct: 21 PCLVVDLEVVRDNFMHFAKALP--DSRVFYAIKANPAPEVLSLLASLGSCFDCASVQEIQ 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +RI F K +I A + GI F+V+ +E++ + + A I Sbjct: 79 MALAAGATPDRISFGNTIKKERDIARAYELGIRLFSVDCTAEVEKIARVAPGSKVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 139 YDCAGA----------EWPLSRKFGCDPEMAVDVLDVAKRLG-LEAYGISFHVGSQQRKV 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A + + + G N+ +++GGG Y + P + ++FG Sbjct: 188 KAWDRALAMAAQVFRDCAERGINLSMVNMGGGFPTKYLKEVPPVVQYGRSIFRALRKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ T+V+ I K +D I Y Sbjct: 248 NQIPETIIEPGRGMVGNAGVIETEVVLISKKSDDDETRWVYLDIGKFGGLAETMDESIRY 307 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + + GP C++ D + LP GD L IE TGAY + S Sbjct: 308 AIKSRHDGAEMTPCVLAGPTCDSADVLYEKLPYPLPVTLEIGDKLLIEGTGAYTSTYSAV 367 Query: 382 -YNSRLLIP 389 +N + Sbjct: 368 AFNGFPPLA 376 >gi|91975336|ref|YP_567995.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB5] gi|91681792|gb|ABE38094.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB5] Length = 380 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 87/367 (23%), Positives = 149/367 (40%), Gaps = 20/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ +F+ A D+ V YA+KAN V+ LA LGS D S E++ Sbjct: 21 PCLVVDLEVVRDNFTSFARALP--DSRVFYAVKANPAPEVLSLLASLGSCFDCASVQEIQ 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +RI + K +I + + GI F+V+ +E++ + + A I Sbjct: 79 MALAAGATPDRISYGNTIKKERDIARSYELGIRLFSVDCTAEVEKIARSAPGSKVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 139 YDCAGA----------EWPLSRKFGCDPEMAVDVLDAAKRLG-LEAYGISFHVGSQQRKV 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A + + + G ++ +++GGG Y + P + ++FG Sbjct: 188 KAWDRALAMAATVFRDCAERGISLSMVNMGGGFPTKYLKEVPPVVQYGRSIFRALRKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ T+V+ I +DK I Y Sbjct: 248 NQIPETIIEPGRGMVGNAGVIETEVVLISNKSDKDETRWVYLDIGKFGGLAETMDESIRY 307 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + + GP C++ D + LP GD L IE TGAY + S Sbjct: 308 AIRSRHDGAEMTPCVLAGPTCDSADVLYEKMPYPLPVTLEIGDKLLIEGTGAYTSTYSAV 367 Query: 382 -YNSRLL 387 +N Sbjct: 368 AFNGFPP 374 >gi|46123051|ref|XP_386079.1| hypothetical protein FG05903.1 [Gibberella zeae PH-1] Length = 448 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 80/377 (21%), Positives = 134/377 (35%), Gaps = 36/377 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L + YA+K N + +IK L+ LG+G D S+ E+ + Sbjct: 67 FFVADLGEVYRQHLRWKKNLPR--VRPFYAVKCNPDPQIIKLLSELGTGFDCASKTEIEQ 124 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+A + +RI+++ KT + G+ ++ EL + + I Sbjct: 125 VLSAGLSPDRIIYAQPCKTNSYVRYVKSVGVKQMTFDNADELYKIAKLYPGAELFLRIM- 183 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A A L + + GV H+GS Sbjct: 184 ---------TDDSESLCRFSMKFGAAMDTTEGLLALAKDLG-LNVVGVSFHVGSGASDPL 233 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + + QQ R G ++ +DVGGG + + Sbjct: 234 AFFKAVRDAHTVFQQARDFGFAMRTLDVGGGFCGDTFEAMANVLRGAL---DEFFPPHSG 290 Query: 269 CKIILEPGRFLVADVGILVTK------VISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 +II EPGR+ VA + V + ++ + ++D Sbjct: 291 VEIIAEPGRYYVATAFTIACNIIARRTVEDPTLDGKGYMLYVNDGVYGNFSNIMFDHQQP 350 Query: 323 INYIVNPAGDRLHIH-------------ADIVGPICETGDFIALN-RKIALPRPGDLLYI 368 I+ +G L I GP C+ D I + R + GD LY Sbjct: 351 TAKILRTSGKTLFETAAAEPTPVGEGFEYSIWGPTCDGIDRITDSTRFDPILDVGDWLYF 410 Query: 369 EKTGAYGAVQSGTYNSR 385 E GAY + +N Sbjct: 411 EDMGAYTKCSATQFNGF 427 >gi|33340513|gb|AAQ14852.1|AF321138_1 ornithine decarboxylase [Nicotiana tabacum] Length = 433 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 69/372 (18%), Positives = 129/372 (34%), Gaps = 21/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + +A + YA+K N + + L+ +GS D S E+ Sbjct: 66 PFYVLDLGEVVSLMDQWKSALP--NIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + +RIVF+ K +I A + G+ +SE E+ + + + Sbjct: 124 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSEL--SVR 181 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + D NA + + + A+ + +SGV HIGS Sbjct: 182 IKPMLDGNARSAMGPKY--------GALPEEVDPLLRAAQAARLTVSGVSFHIGSGDADS 233 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ A +++ + G + + GG + H + A H + Sbjct: 234 NAYLGAIAAAKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQH-FDDEP 292 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + II EPGRF L T +I + + ++ + M LYD + Sbjct: 293 ELTIIAEPGRFFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPL 352 Query: 328 NPAGDRLHIHA--------DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +R ++ + GP C+ D + + ++ + D L GAY Sbjct: 353 AVLSNRSNVTCGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAG 412 Query: 380 GTYNSRLLIPEI 391 +N + Sbjct: 413 SNFNGFNTSAIV 424 >gi|5738966|dbj|BAA83427.1| ornithine decarboxylase [Nicotiana tabacum] Length = 432 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 69/372 (18%), Positives = 130/372 (34%), Gaps = 21/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + +A + YA+K N + + L+ +GS D S E+ Sbjct: 65 PFYVLDLGEVVSLMDQWKSALP--NIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 122 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + +RIVF+ K +I A + G+ +SE E+ + + + Sbjct: 123 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSE----LL 178 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+ P + N + + + A+ + +SGV HIGS Sbjct: 179 LRIKPMFDGNARCPMGPKY------GALPEEVEPLLRAAQAARLTVSGVSFHIGSGDADS 232 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ A +++ + G + + GG + H + A H + Sbjct: 233 NAYLGAIAAAKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVRSALKQH-FDDQP 291 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + II EPGRF L T +I + + ++ + M LYD + Sbjct: 292 ELTIIAEPGRFFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPL 351 Query: 328 NPAGDRLHIHA--------DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +R ++ + GP C+ D + + ++ + D L GAY Sbjct: 352 AVLSNRTNVTCGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAG 411 Query: 380 GTYNSRLLIPEI 391 +N + Sbjct: 412 SNFNGFNTCAIV 423 >gi|195430116|ref|XP_002063103.1| GK21743 [Drosophila willistoni] gi|194159188|gb|EDW74089.1| GK21743 [Drosophila willistoni] Length = 397 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 80/397 (20%), Positives = 159/397 (40%), Gaps = 29/397 (7%) Query: 4 FKYFEGSLHA----ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 Y+E L+ E+ +L++L +++E+ + + YA+ Sbjct: 10 INYYEQRLNIRQVIEDANLQELDEA----LNICDLSSVERKFHLWQRLLPR--VHPFYAV 63 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K N + +++ LA LG+G D S+ EL+ L + V ERI+F+ + + + A + G+ Sbjct: 64 KCNDDPMIVQVLAKLGAGFDCASKNELKLVLGSAVTPERIIFANPCRPVSHLAYAEKHGV 123 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 V++E E+ L + N + + K + DKFG Sbjct: 124 TNGTVDNEFEIYKLYKHYP----------SSNLIVRYKSEAKEAQCPLGDKFGCDADGDA 173 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + + + ++G +H+GS ++ ++++A + + L Q ++ +D+GGG Sbjct: 174 TALMLLAKALELNVTGTSVHVGSGCSELGAYNRAIRKAKHLFQFGELLDFDMNLLDIGGG 233 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + + D + +YF + +II EPGRF VA L+ K+ + ++ + Sbjct: 234 FPGSDDEKFEKIAE-DVNKSLDRYFPDENVEIIAEPGRFFVASALTLICKIHAKREVRNP 292 Query: 300 --------TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 + + D F + +N D + + GP C+ D I Sbjct: 293 STGKLDTVMYYLNDGIYGSFNCILYDHQVIIAEHYLNSTEDLPQFKSLLFGPTCDALDMI 352 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 N ++ GDL+ GAY + +N + Sbjct: 353 TDNLQLPNLNRGDLIGFPNMGAYTVPVASPFNGFEVP 389 >gi|304311735|ref|YP_003811333.1| Carboxynorspermidine decarboxylase [gamma proteobacterium HdN1] gi|301797468|emb|CBL45688.1| Carboxynorspermidine decarboxylase [gamma proteobacterium HdN1] Length = 384 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 66/389 (16%), Positives = 123/389 (31%), Gaps = 16/389 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 V++P Y + +N + + + A K + + + G Sbjct: 5 IDQVESPCYVLDEALLRQNLQLIRSVAESAGVEIIVAFKGFAMWSAFPVVREYVRGATAS 64 Query: 82 SEGELR-RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S E R A + V + DEI + + E + + Sbjct: 65 SPHEARLAFEEMKTLAHTYSPAYVEREFDEICQFSSHITFNSLAQFERFQPLVKKFEQQA 124 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 G+ R+NP+ + + GI + + ++ + Sbjct: 125 GRHISFGLRINPEFAVVATDLYNPCAPGSRLGIAVDHLPK-----------QLPEGIEGL 173 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + L ++ ++ IQ ++GGG + + ++ Sbjct: 174 HFHALCESNSFDLENALAEIERKFGHLLPQIQWFNMGGGHLMTRKG----YDVAHLIRVL 229 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + KIILEPG D G+LV++V+ I ++ ILDV+ M L Y Sbjct: 230 TAFREKWGLKIILEPGSAFAWDTGVLVSQVVDIVENQGIKTAILDVSFTAHMPDCLEMPY 289 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + I G C +GDFI A + GD + E Y V++ Sbjct: 290 KPRIRGAHQEPVANLPTYRIGGNSCLSGDFIGDWSFGAPLKVGDTIVFEDMIHYTMVKTT 349 Query: 381 TYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 T+N + Q + R T+++ Sbjct: 350 TFNGVPHPSIAIWRDGQGLQVVRRFTYED 378 >gi|328684732|gb|AEB33799.1| hypothetical protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 201 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 85/197 (43%), Positives = 118/197 (59%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE+VS+ + + TP Y YS +E+ + F AF ++C+A+K Sbjct: 1 MNHFNYKNQQLFAEDVSVSDIINQYGTPAYIYSRATLERRWHAFDKAFGSHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ +A LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL +N+ A LGK API+ RVNPD +A+TH ISTG KE+KFG+ + + Sbjct: 121 CFNIESIAELHRINEVAGQLGKIAPISLRVNPDADAHTHPYISTGLKENKFGVSVTNEGN 180 Query: 181 LYAYASTLPGVKISGVD 197 Y + Sbjct: 181 KYWEKRYEKKHRRKTYC 197 >gi|282801751|gb|ADB02854.1| AzicN [Kibdelosporangium sp. MJ126-NF4] Length = 396 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 94/388 (24%), Positives = 169/388 (43%), Gaps = 14/388 (3%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP Y Y + N A +++ Y+LKAN + ++ + G+ ++ S GEL Sbjct: 8 TPAYVYDLAEVRANQTALVRALPE-KSVLYYSLKANPHPDLLAEIRKGGARAEVCSRGEL 66 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 ALAA P + ++++G GK ++ A++ G+ F+V+S + L L++ A + Sbjct: 67 DAALAAGWPVDDVLYTGPGKRDQDLAYAIELGVRKFSVDSVTGLDQLDRVAAVQATEVRC 126 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+N D + TG +FG + + + P V +SG+ +++G+ + Sbjct: 127 LLRINDDQPVPGQGLVMTGVAS-QFGADTSWVLAEPERFAGRPHVIVSGLHLYMGTNLAT 185 Query: 207 IESFHKAFKLLRDL----TQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ F+ D T+ LR +G ++ +D+GGG G + + + + Sbjct: 186 VDDLVAQFRRSLDTGIRLTEVLRQHGADMHMLDLGGGFGAPFARGGAAVDLAGLKDELDR 245 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 I E GR+LV G L T V+ +K+S K ++LD +N + Sbjct: 246 MLDGHDLFIAFESGRYLVGTAGTLYTTVLDVKQSHGKRVLVLDSGINHLGGMSGLRRLPP 305 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-- 380 + V A A + GP+C D A + + +PGD+L I GAYG + Sbjct: 306 LVPDV-LADHGELADAMLAGPLCTPLDLWARSAPVGEVKPGDVLAIPNVGAYGL-YASLV 363 Query: 381 TYNSRLLIPEIMVNGSQF----HIIRPR 404 + L E++V+G +I R Sbjct: 364 AFLGHPLPVEVVVDGDAPPRISRLILTR 391 >gi|209151020|gb|ACI33056.1| Ornithine decarboxylase 1 [Salmo salar] Length = 455 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 83/378 (21%), Positives = 141/378 (37%), Gaps = 31/378 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + K ++ ++ A YA+K N ++AV+ TLA L +G D S+ E++ Sbjct: 37 FYVCDLGDVLKKHMRWARAMPR--VTPFYAVKCNDSRAVVTTLASLNAGFDCASKTEIQI 94 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V A RI+++ K + +I A G+ +S+ EL + + IA Sbjct: 95 VQSLGVDANRIIYANPCKQVSQIKYASAHGVQMMTFDSDVELMKVARYHDDAKLVLRIA- 153 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + GV H+GS + Sbjct: 154 ---------TDDSKAVCRLSVKFGATLKACRGLLERAKELGL-DVIGVSFHVGSGCTDPD 203 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ +A R + G N+ +D+GGG + + + + + + + Sbjct: 204 TYSQAISDARCVFDMGAEVGFNMTLLDIGGGFPGSEDTKLKFEEITAVINPALDKYFPAD 263 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY--------- 317 +II EPGR+ VA L +I+ K ++ + R +Y Sbjct: 264 SGIRIIAEPGRYYVASAYTLAVNIIAKKVIMNEQSASDEDDDWTSDRTLMYYVNDGVYGS 323 Query: 318 -------DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 A+ P D I GP C+ D IA + + G+ L E Sbjct: 324 FNCILYDHAHPLPTLHKKPKPDERMYPCSIWGPTCDGLDRIAEVCTLPDMQVGEWLLFEN 383 Query: 371 TGAYGAVQSGTYNSRLLI 388 GAY S T+N Sbjct: 384 MGAYTVAASSTFNGFQKP 401 >gi|158300906|ref|XP_320709.4| AGAP011806-PA [Anopheles gambiae str. PEST] gi|157013385|gb|EAA00695.5| AGAP011806-PA [Anopheles gambiae str. PEST] Length = 404 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 73/373 (19%), Positives = 134/373 (35%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + + + + + + YA+K N + +++TL LG+G D S+GE+ Sbjct: 37 PLHVLDLDDVVRKHYGWCAQMPRVKP--YYAVKCNDDPRILQTLMTLGTGFDCASKGEME 94 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 R L V E I+F+ K+I + A + + EL+ ++Q + Sbjct: 95 RMLGYGVKPESIIFAQPAKSIPSLLYARSKQVSVMTFDGAVELEKIHQYYPEARLVLRMR 154 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 KFG + + + G+ H+GS D+ Sbjct: 155 ----------HDSLKVRCSLGKKFGCDPIAEAPELLRYAATLRMNVIGISFHVGSDCDEH 204 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 E +++A K+ + L + ++ G+ +D+GGG + + ++ + Sbjct: 205 EVYYEAVKIAKGLFEYAKTIGYEFSLLDIGGGFPGDNDKPIDRYAQAVNVAIDQFFPAES 264 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR--------PTLYDA 319 +II EPGR+ V+ LV+ V S + +K + + Sbjct: 265 DIRIIAEPGRYYVSSAVTLVSFVDSKRVMKEKQPDGTEKTRMYYYLNDGIFGTFYCTAHE 324 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 IV + GP C+ D I + + GD + E GAYG V + Sbjct: 325 AQPAIPIVERKTGAKDFPTSVWGPTCDVMDLILPDVMLPELNVGDSVVFENCGAYGQVLA 384 Query: 380 GTYNSRLLIPEIM 392 +N L I Sbjct: 385 CRFNGFPLPKVIA 397 >gi|322787419|gb|EFZ13507.1| hypothetical protein SINV_03783 [Solenopsis invicta] Length = 394 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 77/374 (20%), Positives = 124/374 (33%), Gaps = 19/374 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I + ++ YA+K N + VIK LA L +G D SE E+R Sbjct: 35 FYIVDLGDIINKHREWTTKIPR--VTPHYAVKCNPDPNVIKILAALNAGFDCASEQEIRE 92 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V A+RI+F+ K+ I A + + V+SE EL + I Sbjct: 93 VMQYGVQADRIIFANPYKSPSHIKYAKKMNVDQITVDSEIELLKIKDLYPEAKIVIRIRC 152 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S KFG + + G+ + G H GS ++ Sbjct: 153 DAKD----------SDVDLGLKFGCESNDDAVRLIQLTMDLGLTLHGFSFHPGSPCWELN 202 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ + R L +S G + GG + +S + Sbjct: 203 AYSRGIGFCRQLIAIAKSMGCKDVQLIDIGGGFPGKRGTNIDKLASIIN--DAIQDLDPS 260 Query: 269 CKIILEPGRFLVADVG----ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +II EPGR+ V L +K + K +V + L + Sbjct: 261 IRIISEPGRYYVDSAFTLASYLHSKKTAFKNGKFMRMYYTNVGTYNSFIDELLGLKSRVP 320 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 V + + GP C++ D I + + GD L GAY T+N Sbjct: 321 QTVFGPMSGEKFPSTVWGPTCDSYDVIVKDALLPELHIGDWLVWNDVGAYTLCLCTTFNG 380 Query: 385 RLLIPEI-MVNGSQ 397 + + + SQ Sbjct: 381 FPIPKVVPFIRKSQ 394 >gi|37677184|ref|NP_937580.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016] gi|37201729|dbj|BAC97550.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016] Length = 411 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 83/396 (20%), Positives = 144/396 (36%), Gaps = 20/396 (5%) Query: 11 LHAENVSLEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 L AE + + + P I + Y NA + + YALK + V++ Sbjct: 30 LSAEEIQVIETSVEQFGAPLLLLDCDVIRQQYRALKNALP--NVTLHYALKPLPHPVVVR 87 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 TL G+ D+ + GE+ + VPAE + + K +I AL G F V++ +E Sbjct: 88 TLLAEGASFDLATTGEVELVASEGVPAELTIHTHPIKRDADIRDALAYGCNVFVVDNLNE 147 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L+ + ++FR + KFG Q + A Sbjct: 148 LEKFKAYRDEVELLVRLSFRNSEAF----------ADLSKKFGCSPEQALVIIETAKEW- 196 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 ++I G+ H+GSQ + +A R + +Q+ G GG ++ Sbjct: 197 NIRIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVNYTQQV 256 Query: 250 PPSSSDYASLIHQYFG-NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P A + ++ EPGRF+ A V V+ + + + LD + Sbjct: 257 MPIDQFCAPINEALSLLPETVHVLAEPGRFICAPAVTSVASVMGQAEREGQIWYYLDDGI 316 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 ++D + G+ I + + GP C++ D IA N + GDL+ Sbjct: 317 YGSFSGLMFDDARYPLTTIKQGGE--LIPSVLSGPTCDSVDVIAENILLPKLNNGDLVIG 374 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMVNG---SQFHII 401 GAY + + +N I +N +I Sbjct: 375 RTMGAYTSATATDFNFFKRAQTIALNEFVAGSERMI 410 >gi|290959859|ref|YP_003491041.1| decarboxylase [Streptomyces scabiei 87.22] gi|260649385|emb|CBG72500.1| putative decarboxylase [Streptomyces scabiei 87.22] Length = 487 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 96/407 (23%), Positives = 155/407 (38%), Gaps = 21/407 (5%) Query: 26 QTPFY-CYSTTAIEKNYLTFSNAF-----DGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 TP I + AF G + +A+KA V++ L G G + Sbjct: 69 GTPVVALLDVNGIRASAGALRRAFDAVTAPGTPVLHAFAVKATPLVPVLRLLREAGIGAE 128 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 + S GEL A AA V R V KT E+ AL GI N ++ EL ++ S Sbjct: 129 VASAGELALARAAGVSPRRTVLDSPAKTPAELREALALGIA-VNADNPQELDRIDALVRS 187 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDM 198 ++P+ RVNP + + +ST KFG+ + + L +S + Sbjct: 188 ATTRSPVGIRVNPQVGSGAIGALSTATATSKFGVALRDEGAREWVVQAYLDRPWLSRLHA 247 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQ--LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H GSQ + + +L ++ R I ID+GGGL + + S+ P+ Y Sbjct: 248 HSGSQGMPLSLMTRGITETYELAEEINRRIGRRQIDTIDIGGGLPVNFASEAATPTYEQY 307 Query: 257 ASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 A L+ + + + ++ E GR L+A G +V +V K + + + + R Sbjct: 308 ARLLAEAVPGLFDGRYGLVTEFGRSLLAKHGSIVARVEYTKSAGGRAIAVTHAGVQVATR 367 Query: 314 PTLYDAYHEINYIVNPAG----DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + A + D+ GP C GD +A R + L PGD Sbjct: 368 TVYAPGSWPLRIAAYDAKGRVKNGPVAVQDVAGPACFAGDLLAEGRPLPLLEPGDYAAAL 427 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV--NGSQFH--IIRPRMTFQELIE 412 TGAY YNS + ++R T ++++ Sbjct: 428 DTGAYYFAHHYAYNSLPRPGIYGYAPGDGRTRFAVVRQAQTVEQIVA 474 >gi|209966274|ref|YP_002299189.1| lysine [Rhodospirillum centenum SW] gi|209959740|gb|ACJ00377.1| lysine [Rhodospirillum centenum SW] Length = 376 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 91/366 (24%), Positives = 141/366 (38%), Gaps = 20/366 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP + +NY S A D + YA+KAN +++ L LGS D S E+ Sbjct: 16 TPCLVVDLDVVARNYDRLSGALP--DAKIYYAVKANPAPEILRLLTGLGSSFDTASVPEI 73 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 LAA +RI + K +I A + G+ F +SE+EL+ + A I Sbjct: 74 EDCLAAGATPDRISYGNTIKKAADIRRAYELGVRLFAFDSEAELEKIAANAPGSRVFCRI 133 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 T + + KFG L A+ L V GV H+GSQ Sbjct: 134 L----------TSGEGADWPLSRKFGCDPEMARDLLLRAAALDVV-PYGVSFHVGSQQRD 182 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYF 264 + + A + + L G ++ +++GGG Y +D +A ++F Sbjct: 183 LAQWDAALSTTAAIFRDLEEKGVALRMVNMGGGFPTRYRTDVPGTDEYGFAIDEALRRHF 242 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 GN + I+EPGR +V D GI+ ++V+ I + + I Sbjct: 243 GNRIPETIVEPGRGMVGDAGIIQSEVVLISRKSANDLRRWVYLDIGKFGGLAETMDEAIQ 302 Query: 325 YIVNPAGD-RLHIHADIVGPICETGDFI---ALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 Y + D + GP C++ D + A R R GD + I TGAY S Sbjct: 303 YPIETERDGGPAEPVILAGPTCDSADVLYERAEYRLPVDLRIGDRVAIRATGAYTTSYSA 362 Query: 381 -TYNSR 385 +N Sbjct: 363 VNFNGF 368 >gi|312885074|ref|ZP_07744762.1| Vibrioferrin biosynthesis protein PvsE [Vibrio caribbenthicus ATCC BAA-2122] gi|309367284|gb|EFP94848.1| Vibrioferrin biosynthesis protein PvsE [Vibrio caribbenthicus ATCC BAA-2122] Length = 406 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 87/368 (23%), Positives = 158/368 (42%), Gaps = 13/368 (3%) Query: 18 LEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + +LA P Y Y TA+E++ + + + YA KAN ++ +++TLA Sbjct: 15 VLQLAEQHAQPLCAYLYDLTALEQHIKQMKHVLPK-NVELFYAAKANPSEPILRTLAPYV 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S GEL + ++F G GK E++ A++ I +VES +EL+ + Sbjct: 74 DGFEAASGGELVHLHQQQLNM-PLIFGGPGKMPSELEQAIELNIDAIHVESLTELQRIAT 132 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 +L + A I R+N DI T K++ G K FG+ ++ + P V + G Sbjct: 133 LTETLDRSATIFLRMNIDIGDITLSKLAMGGKPTPFGLDESELSNALTLLRDFPKVHLKG 192 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI-DVGGGLGIAYHSDHRPPSSS 254 H+ S ++ + + + ++ + + ++GGG+GI Y ++ + + Sbjct: 193 FHFHLMSHQLDVDRHLALMQRYFQVVKDWQARFQLDELMINLGGGMGINYQNNEQHFPWT 252 Query: 255 DYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ + K+ E GR++ A G V +V+ IKK+ + FVI + F Sbjct: 253 EFCDKLEFLIAKEQVQDWKLRFECGRYISAPCGYYVMEVLDIKKNLGENFVIARGGTHHF 312 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIH-----ADIVGPICETGDFIALNRKIALPRPGDLL 366 P H + + + + A VG +C D +A N+ I GD + Sbjct: 313 RTPAAQSHDHPFAILPSNKPKTISLPLAQSQATFVGQLCTPKDVLARNQNIDHLDIGDYV 372 Query: 367 YIEKTGAY 374 GAY Sbjct: 373 VFTHAGAY 380 >gi|308503917|ref|XP_003114142.1| CRE-ODC-1 protein [Caenorhabditis remanei] gi|308261527|gb|EFP05480.1| CRE-ODC-1 protein [Caenorhabditis remanei] Length = 426 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 73/379 (19%), Positives = 139/379 (36%), Gaps = 25/379 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + F I + + + ++ YA+K N++ +I+ LA LG G D S Sbjct: 38 EENDSSFMLVDLDKIIERFELWKRELPMIEP--FYAVKCNTDLVLIRILASLGCGFDCAS 95 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+ + V A+R++++ KT I A++ + ++ EL + + + Sbjct: 96 REEIDIVMGTGVSADRLIYANPCKTRSFITHAMERDVRMMTFDNSEELLKIARLHPNAEM 155 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 IA +T KFG ++ GV + G+ H+GS Sbjct: 156 ILRIAVS----------DPTATCPLNLKFGADPVLAGPQLLKLASEEGVNVVGISFHVGS 205 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + ++ A + ++L + G + ID+GGG A H + + + + Sbjct: 206 GCNDASAYRNALQHAKNLCEIGEGLGFKMDIIDMGGGFPGAEHHNPFEKIAETIRDALDE 265 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVIS-------------IKKSADKTFVILDVAMN 309 +F + ++I EPGRF A L +I + ++ + Sbjct: 266 FFPETEKRLIAEPGRFFAAGPFSLCANIIHATEVPATKITKDPKDCADHGYMYYINDGVY 325 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 ++D H + + G + I GP C++ D + + +A G+ LY Sbjct: 326 GSFNCIMFDHAHPVGAPLFDVGRNEKYISTIWGPTCDSLDLVEDKKLMAKMEIGEWLYYP 385 Query: 370 KTGAYGAVQSGTYNSRLLI 388 GAY T+N Sbjct: 386 DMGAYTLAAGTTFNGFAKP 404 >gi|7230377|gb|AAF42973.1|AF127242_1 ornithine decarboxylase [Nicotiana tabacum] gi|13171237|gb|AAK13622.1|AF233849_1 ornithine decarboxylase [Nicotiana tabacum] gi|1754522|dbj|BAA14049.1| ornithine decarboxylase [Nicotiana tabacum] Length = 433 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 69/372 (18%), Positives = 131/372 (35%), Gaps = 21/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + +A + YA+K N + + L+ +GS D S E+ Sbjct: 66 PFYVLDLGEVVSLMDQWKSALP--NIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + +RIVF+ K +I A + G+ +SE E+ + + + Sbjct: 124 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSE----LL 179 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+ P ++ N + + + A+ + +SGV HIGS Sbjct: 180 LRIKPMLDGNARCPMGPKY------GALPEEVDPLLRAAQAARLTVSGVSFHIGSGDADS 233 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ A +++ + G + + GG + H + A H + Sbjct: 234 NAYLGAIAAAKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQH-FDDEP 292 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + II EPGRF L T +I + + ++ + M LYD + Sbjct: 293 ELTIIAEPGRFFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPL 352 Query: 328 NPAGDRLHIHA--------DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +R ++ + GP C+ D + + ++ + D L GAY Sbjct: 353 AVLSNRSNVTCGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAG 412 Query: 380 GTYNSRLLIPEI 391 +N + Sbjct: 413 SNFNGFNTSAIV 424 >gi|299132171|ref|ZP_07025366.1| Orn/DAP/Arg decarboxylase 2 [Afipia sp. 1NLS2] gi|298592308|gb|EFI52508.1| Orn/DAP/Arg decarboxylase 2 [Afipia sp. 1NLS2] Length = 380 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 89/367 (24%), Positives = 145/367 (39%), Gaps = 20/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY TF+ A D+ V YA+KAN V+ LA LGS D + E+ Sbjct: 21 PCLVVDLEVVRDNYQTFAKALP--DSRVFYAVKANPAPEVLSLLASLGSCFDTATVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +RI F K +I A GI F V+ +E++ + + A I Sbjct: 79 MALAAGATPDRISFGNTIKKERDIARAYALGIRLFAVDCVAEVEKIARSAPGAKVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 139 YDCAGA----------EWPLSRKFGCEPEMAVEVLDLAKRL-RLEPVGISFHVGSQQRKV 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A + + + G ++ +++GGG Y D P + ++FG Sbjct: 188 KAWDRALAMASQVFRDCAERGISLSMVNMGGGFPTKYLKDVPPVVQYGRSIFRALRKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I K +D I Y Sbjct: 248 NQIPETIIEPGRGMVGNAGVIEAEVVLISKKSDDDENRWVYLDIGKFGGLAETMDESIRY 307 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + + GP C++ D + LP GD + IE TGAY + S Sbjct: 308 AIRTRHDGAEMAPCVLAGPTCDSADVMYEKVPYPLPVTLEIGDKVLIEGTGAYTSTYSSV 367 Query: 382 -YNSRLL 387 +N Sbjct: 368 AFNGIPP 374 >gi|213622587|ref|ZP_03375370.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 256 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 16/243 (6%) Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 K + I I + ++ + +Q+ G +++ I GGGL I YH Sbjct: 14 MQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGGLSIPYHEGEE 73 Query: 250 PPSSSDYASLIHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 P + Y L + K+ +EPGR+LVA G+LVT+V S+K+ + FV+ Sbjct: 74 PVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRYLVAQSGVLVTQVRSVKQMGSRHFVL 133 Query: 304 LDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN------ 354 +D ND MRP +Y +YH I + + + GP+CE+GD Sbjct: 134 VDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVE 193 Query: 355 -RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 R + PGD L + TGAYGA S YNSR L+PE++ + Q +IR R T +EL+ L Sbjct: 194 TRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLAL 253 Query: 414 DSI 416 + + Sbjct: 254 EML 256 >gi|260425449|ref|ZP_05779429.1| decarboxylase, pyridoxal-dependent [Citreicella sp. SE45] gi|260423389|gb|EEX16639.1| decarboxylase, pyridoxal-dependent [Citreicella sp. SE45] Length = 406 Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats. Identities = 79/378 (20%), Positives = 144/378 (38%), Gaps = 19/378 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 AH + P T + ++Y + + YA+KAN +++TL LGS D Sbjct: 42 AHRFERPTLVIDTQTVARHYAALAQGLGR--ARIHYAVKANPAPEILRTLTRLGSNFDAA 99 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E+ LAA A+RI F K + ++ A G+ F ++E EL+ + + A Sbjct: 100 SRTEIAMCLAAGATADRISFGNTVKKVSDVAWAHAQGVTLFAADAEQELEKIAEHAPGAR 159 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + KFG ++ L+A A L + G+ H+G Sbjct: 160 VYIRVIVENTEA----------DWPLTRKFGCSRDKVLHLFAVARQLGLM-PVGLSFHVG 208 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLI 260 SQ + + + + + R GH + +++GGG Y P+ + Sbjct: 209 SQTRRAQMWAPVLDQVAAIWHAARDAGHEMSLLNIGGGFPAFYGEAIDAPACYAADVMTL 268 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT-FVILDVAMNDFMRPTLYDA 319 +++ EPGR LVA+ G + +V+ + K +D + + + F Sbjct: 269 VHERFGDVPEVMAEPGRGLVAEAGAIAAEVLLVSKKSDNDLHRWVYLDIGKFSGLAETIE 328 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR--KIAL-PRPGDLLYIEKTGAYGA 376 + + GP C++ D + R ++ L R GD + I GAY + Sbjct: 329 EAIRYQFLTDRDHEDTGACILAGPSCDSADVLYEKRPVELPLGLRAGDRIVIRNCGAYTS 388 Query: 377 VQSGT-YNSRLLIPEIMV 393 + +N + + + Sbjct: 389 TYASVGFNGFPPLDVVAI 406 >gi|159031805|dbj|BAF91874.1| ornithine decarboxylase [Nicotiana benthamiana] Length = 433 Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats. Identities = 69/372 (18%), Positives = 129/372 (34%), Gaps = 21/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + +A + YA+K N + + L+ +GS D S E+ Sbjct: 66 PFYVLDLGEVVSLMDQWKSALP--NIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + +RIVF+ K +I A + G+ +SE E+ + + + Sbjct: 124 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSE----LL 179 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+ P ++ N + + + A + +SGV HIGS Sbjct: 180 LRIKPMLDGNARCPMGPKYGALPEEVDPLLRAAQTARLT------VSGVSFHIGSGDADS 233 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ A +++ + G + + GG + H + A H + Sbjct: 234 NAYLGAIAAAKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQH-FDDEP 292 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 II EPGRF L T +I + + ++ + M LYD + Sbjct: 293 GLAIIAEPGRFFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPL 352 Query: 328 NPAGDRLHIHA--------DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +R ++ + GP C+ D + + ++ + D L GAY Sbjct: 353 AVLSNRSNVTCGRSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAG 412 Query: 380 GTYNSRLLIPEI 391 +N + Sbjct: 413 SNFNGFNTSAIV 424 >gi|114705385|ref|ZP_01438293.1| ornithine decarboxylase [Fulvimarina pelagi HTCC2506] gi|114540170|gb|EAU43290.1| ornithine decarboxylase [Fulvimarina pelagi HTCC2506] Length = 377 Score = 156 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 87/373 (23%), Positives = 152/373 (40%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P +++N+ F A D+ + YA+KAN ++K LA LGS D S E++ Sbjct: 18 PCLVVDLDVVKENFNAFRKALP--DSAIFYAVKANPAPEILKLLASLGSNFDCASVAEIK 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA V +RI F K ++ A G+ F V+ E++ + + A + + Sbjct: 76 MALAAGVGPDRISFGNTIKKERDVAAADALGVSLFAVDCIEEVEKVARAAPAARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + +A L ++ +G+ H+GSQ Sbjct: 136 ----------TDGEGAEWPLSRKFGCMPAMAIDVLTHARDLG-LRATGISFHVGSQQTDT 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 ++ A + + + L G N+ +++GGG Y D + +A ++FG Sbjct: 185 NAWDAAIGDAKFVFEALERRGINLTLVNMGGGFPTRYLKDVPTAQAYGHAIFESLKKHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V D G++ +V+ + K +D I Y Sbjct: 245 NRLPETIIEPGRGMVGDAGVIKAEVVLVSKKSDTDENRWVYLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGD-RLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + GP C++ D + + LP GD + IE TGAY + Sbjct: 305 PIRTRHDGGATEPCVLAGPTCDSADVLYEKKPYPLPLALTIGDEVLIEGTGAYTTTYASV 364 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 365 AFNGFEPLASYVI 377 >gi|257456760|ref|ZP_05621944.1| decarboxylase, pyridoxal-dependent family [Treponema vincentii ATCC 35580] gi|257445766|gb|EEV20825.1| decarboxylase, pyridoxal-dependent family [Treponema vincentii ATCC 35580] Length = 395 Score = 156 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 95/385 (24%), Positives = 161/385 (41%), Gaps = 22/385 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP + I+KNYL N F D + YA+KAN ++ V+K L LG+ DI S Sbjct: 20 EKLETPCVVINLDRIKKNYLELKNFFSTAD--IYYAVKANPHEEVLKLLIELGANFDIAS 77 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 EL + LA + +R+ + K +I + GI F +S+ +LK L + A Sbjct: 78 RYELDKILALGISPDRLSYGNTIKKAKDIAYFYEKGIRLFATDSKEDLKNLAKYAPKSHV 137 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + KFG + L A L + G+ H+GS Sbjct: 138 YVRILVENTNSAD---------WPLSRKFGCHPDMAYDLCILAKELGLI-PYGISFHVGS 187 Query: 203 QIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASL 259 Q I + A + L ++ I++GGG +Y S + Sbjct: 188 QQRDIGQWDDAIAKTKYLMSSLEEEEDIELKMINMGGGFPASYVVPTNELSEYASEINRY 247 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---KTFVILDVAMNDFMRPTL 316 + FG+ + +IILEPGR +V + G+LVT+VI++ + + + +V +D + + + TL Sbjct: 248 LDDDFGDERPRIILEPGRSMVGNAGVLVTEVITVSRKNNTALQRWVYVDAGVFNGLVETL 307 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGA 373 ++ + GP C++ D + K LP +PGD +Y GA Sbjct: 308 NESIKYPIITSKDTNCSKRGEVILAGPTCDSMDIMYEKYKYQLPINLKPGDRVYFLSAGA 367 Query: 374 YGAVQSG-TYNSRLLIPEIMVNGSQ 397 Y A + +N + ++ + Sbjct: 368 YTATYASVEFNGFPPLKTYIMKNEK 392 >gi|306920205|emb|CBX19979.1| ornithine decarboxylase [Nicotiana glauca] Length = 433 Score = 156 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 69/372 (18%), Positives = 129/372 (34%), Gaps = 21/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + +A + YA+K N + + L+ +GS D S E+ Sbjct: 66 PFYVLDLGEVVSLMDQWKSALP--NIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 LA + +RIVF+ K +I A + G+ +SE E+ + + + Sbjct: 124 YVLALGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSE----LL 179 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+ P + N + + + A+ + +SGV HIGS Sbjct: 180 LRIKPMFDGNARCPMGPKY------GALPEEVEPLLRAAQAARLTVSGVSFHIGSGDADS 233 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ A +++ + G + + GG + H + A + Sbjct: 234 NAYLGAIAAAKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTAAAVAVKSALKQR-FDDEP 292 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + II EPGRF L T +I + + ++ + M LYD + Sbjct: 293 ELTIIAEPGRFFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPL 352 Query: 328 NPAGDRLHIHA--------DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +R ++ + GP C+ D + + ++ + D L GAY Sbjct: 353 AVQSNRSNVTCGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAG 412 Query: 380 GTYNSRLLIPEI 391 +N + Sbjct: 413 SNFNGFNTSAIV 424 >gi|209964337|ref|YP_002297252.1| diaminopimelate decarboxylase, putative [Rhodospirillum centenum SW] gi|209957803|gb|ACI98439.1| diaminopimelate decarboxylase, putative [Rhodospirillum centenum SW] Length = 422 Score = 156 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 81/399 (20%), Positives = 149/399 (37%), Gaps = 13/399 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKA 61 +Y LH +L +LA TP Y YS + +N A + G+ + YA+KA Sbjct: 27 LRYVGRDLHLAGRNLAELARQAGTPAYVYSGPRVLENLRRLKAALESTGLPHAIRYAMKA 86 Query: 62 NSNQAVIKTLAHLG-SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 N + ++ + G G+D S ELR A+ E + ++ + ++ + + Sbjct: 87 NRHGPLLTWMKASGLCGIDACSPNELRFAVQCGFRPEEVSYTATSVSEADLAVLARHPET 146 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 N +S S L+ L S G++ I + ++ + + Sbjct: 147 WVNADSLSTLRRLAAV--SPGREIGIRVNPALGVGYGENQLLRYSGERTSKFGIYRDRFE 204 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + G+ + G+ H+G + A + L R + +++GGGL Sbjct: 205 EALALAASHGLTVRGIHFHVGWGYLNAQLPAWAEVVRECLWFLDRV--PQARLVNLGGGL 262 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ + + RP +A++I F ++ +EPG ++V D G+L+ + ++++ T Sbjct: 263 GVPHAAGDRPLDLEAWAAVIRDSFAGRGIEVWVEPGDYVVKDAGVLLLQANTVERKRATT 322 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI------HADIVGPICETGDFIALN 354 FV +D N + P Y E I G I E D A Sbjct: 323 FVGVDGGFNLAVEPVFYRLPCEPVPARLHQDPARAWAADALAPVSIAGNINEALDLWAEA 382 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 GD++ G Y A + R E ++ Sbjct: 383 LPFPAVEEGDVIAFLNAGGYAAAMGSNHCMRAQASEHLL 421 >gi|27382870|ref|NP_774399.1| ornithine decarboxylase [Bradyrhizobium japonicum USDA 110] gi|27356043|dbj|BAC53024.1| ornithine decarboxylase [Bradyrhizobium japonicum USDA 110] Length = 380 Score = 156 bits (393), Expect = 9e-36, Method: Composition-based stats. Identities = 93/367 (25%), Positives = 150/367 (40%), Gaps = 20/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY TFS A D+ V YA+KAN V+ LA +GS D + E+ Sbjct: 21 PCLVVDLEVVRDNYQTFSKALP--DSRVFYAVKANPAPEVLALLASMGSCFDTATVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +RI F K +I A GI F V+ +E++ + + A I Sbjct: 79 MALAAGATPDRISFGNTIKKERDIARAFALGIRLFAVDCAAEVEKIARAAPGAKVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 139 YDCAGA----------EWPLSRKFGCDPEMAVDVLDVAKRLG-LEPCGISFHVGSQQRKV 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A + + + G N+ +++GGG Y D P + + ++FG Sbjct: 188 KAWDRALAMASQVFRDCAERGINLSMVNMGGGFPTKYLKDVPPVVTYGRSIFRALRKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + GI+ ++V+ I K +D+ V I Y Sbjct: 248 NQIPETIIEPGRGMVGNAGIIESEVVLISKKSDEDEVRWVYLDIGKFGGLAETMDESIRY 307 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + A D + + GP C++ D + LP GD + IE TGAY + S Sbjct: 308 AIRTAHDGADMTPCVLAGPTCDSADVLYEKNPYPLPVTLEIGDKVLIEGTGAYTSTYSSV 367 Query: 382 -YNSRLL 387 +N Sbjct: 368 AFNGIPP 374 >gi|307201784|gb|EFN81457.1| Ornithine decarboxylase [Harpegnathos saltator] Length = 427 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 71/377 (18%), Positives = 131/377 (34%), Gaps = 19/377 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY I + + + + YA+K N + VIK LA L +G D S+ E+R Sbjct: 34 PFYIVDIGDIIRKHHEWITKMP--KVIPHYAVKCNPDPTVIKVLAALNAGFDCASQQEIR 91 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + + V ++RI+F+ K I A + + V+ E EL + + I Sbjct: 92 QVMQYGVQSDRIIFANPTKCPSHIKFAKKKNVSRMTVDGELELLKIKELYPEAEIVIRIR 151 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + + G+ + G H+GS ++ Sbjct: 152 CDSKNSL----------VPLGSKFGCEPDEEAVRLIQLTKDLGLTLHGFSFHVGSPCGEM 201 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +F K + + L R+ G + GG ++ + Sbjct: 202 SAFSKGIGICKQLIAIARAIGCENVQMIDIGGGFPGASDTDIDKLANIVN--DAIQDLDP 259 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSAD----KTFVILDVAMNDFMRPTLYDAYHEI 323 ++I EPG++ V L + + S K ++ + + + Sbjct: 260 SIRVISEPGQYYVTSAFTLASYLHSKKLVRRSGKLMRMYYVNCGVYNSFIEEMLGLKARY 319 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + + GP C++ D I + + R GD L + GAY S T+N Sbjct: 320 PQFLFEPDSHEKFISSLWGPTCDSYDVILKDVLMPELRIGDWLVWKDMGAYTLSISSTFN 379 Query: 384 SRLLIPEI-MVNGSQFH 399 + ++ SQ+ Sbjct: 380 GFPSPMVVPIIRKSQWE 396 >gi|259481591|tpe|CBF75254.1| TPA: ornithine decarboxylase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 434 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 87/371 (23%), Positives = 139/371 (37%), Gaps = 32/371 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + +L + YA+K N + V++ +A LG+G D S+ E+ Sbjct: 61 FYVADMGEVYRQHLRWKMNLSR--VRPFYAVKCNPDPEVLRLMAKLGNGFDCASKAEIDM 118 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 AL+ V RI+++ KT + A + G+ ++ EL + I Sbjct: 119 ALSTGVDPSRIIYAQPCKTKSYLRHAAKVGVKQMTFDNADELYKIKACYPEAELYLRIL- 177 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L +KI GV H+GS + + Sbjct: 178 ---------TDDSNSLCQFSMKFGASLDVARQLLELAHQLE-LKIVGVSFHVGSGAEDPK 227 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q GH + +DVGGG S + + Sbjct: 228 AFLKAVQDARLVFDQAAEIGHELHTLDVGGGFTGETFEKFAAVLDSAL-----ETYFPPN 282 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM-------NDFMRPTLYDAYH 321 +II EPGR+ V L +I+ + D D M ++D H Sbjct: 283 IRIIAEPGRYYVGGAFTLAANIIARRGVQDPENPSKDAYMIYLNDGVYGNFSNIIFDHQH 342 Query: 322 EINYIVNPAGD------RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAY 374 I++ A + + I GP C+ D I+ + L GD LY E+ GAY Sbjct: 343 PEARILSCASEINGRPVSEDVTYSIWGPTCDGIDVISQRSVLPGLLDVGDWLYFEEMGAY 402 Query: 375 GAVQSGTYNSR 385 + +N Sbjct: 403 TRCSATRFNGF 413 >gi|78222123|ref|YP_383870.1| carboxynorspermidine decarboxylase [Geobacter metallireducens GS-15] gi|78193378|gb|ABB31145.1| carboxynorspermidine decarboxylase [Geobacter metallireducens GS-15] Length = 384 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 64/398 (16%), Positives = 130/398 (32%), Gaps = 23/398 (5%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + +EK+ + +P Y + N + + ALKA + +V + Sbjct: 3 GIDIEKILKLAPSPAYVVDLGRLRHNLAILDDVQKRSGAKILMALKAFAMWSVFPIIRET 62 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+ S E R E F+ K D ++L S FN ++ E Sbjct: 63 LQGVCASSPWEARLGREEFGR-EVHSFAAAFKESDVVELLAVSNHLVFNSFNQLERFRP- 120 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + RVNP+ + + + GIP + + + G+ Sbjct: 121 -LWEKERGRVSVGLRVNPEHSEGHTPIYDPCAPKSRLGIP--RAAFEGKSLAGVEGLHFH 177 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + + + ++ H ++ +++GGG I Sbjct: 178 TLCEQLF---------EPLERTAKVFEEKFGPLLHGMKWLNLGGGHHITRAG----YDID 224 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 L+ + G ++ LEPG + G+LV +V+ + + ++ + + P Sbjct: 225 ALVELVKYFKGKYGVEVYLEPGEAIAIGTGVLVGEVLDVVR--NEMEIAILDVSATCHMP 282 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + + GP C GD I +PGD L E Y Sbjct: 283 DVLEMPYRPGITGGFDPGEKAHTYRLAGPSCLAGDVIGDWSFDKPLKPGDRLVFEDMSHY 342 Query: 375 GAVQSGTYNSRLLIPEIMV--NGSQFHIIRPRMTFQEL 410 V++ T+N + ++R R +++ Sbjct: 343 TMVKTTTFNGIQHPAICTFEPETGELRVVR-RFGYEDF 379 >gi|330722436|gb|EGH00276.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC2047] Length = 198 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 3/179 (1%) Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GG + + +PP S+YA+ I + +I EPGR + A+ GILVT+V +K +A Sbjct: 20 GGGLGVTYDNEKPPHPSEYAAAIVEKLKGRDLTLIFEPGRSIAANAGILVTEVALLKHTA 79 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 DK F ++D AMND +RP LY A+ I + G DIVGPICETGDF+ +R++ Sbjct: 80 DKNFAVVDAAMNDLIRPALYQAWQAIEAVKPRHG--ATHRYDIVGPICETGDFLGKDREL 137 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL I +GAYG S YNSR EI+V+G Q H++R R +F + I L+S+ Sbjct: 138 S-LEAGDLLAIRSSGAYGFTMSSNYNSRNRAAEIIVDGEQCHVVRRRESFADQIALESV 195 >gi|222054242|ref|YP_002536604.1| Diaminopimelate decarboxylase [Geobacter sp. FRC-32] gi|221563531|gb|ACM19503.1| Diaminopimelate decarboxylase [Geobacter sp. FRC-32] Length = 439 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 95/425 (22%), Positives = 165/425 (38%), Gaps = 34/425 (8%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + ++A TP Y + IE + N + V YA+KANS++ V++ + + G Sbjct: 16 IPQIAQQWGTPIYLHDQAYIENSCEQLLNMPNAYGLHVRYAMKANSDRTVLRVVTNKGLD 75 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY---CFNVESESELKTLN 134 LD S E RA AA +P R++ + DE L+S I +NV S ++ + + Sbjct: 76 LDCSSVDEAARAHAAGIPYSRMMLTTQEVPADEERAELESMIKAGLKYNVCSMTQFQLIA 135 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 A + I TG + FG+ ++ + + A A+ Sbjct: 136 DFAKANTIDLSIRVHP-GAAGGGESATRDTGSEYSCFGVHLNDVPKVKALAAEQGLR--- 191 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + I K + + +++ + + GGGL +A + + Sbjct: 192 --FTQVHVHIGSGGDPEKWRENIDRELGFVKTYFPDATTVSFGGGLKVARMPGEKQADIA 249 Query: 255 DYASLIHQYFGNLQC------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + Q + K+ +EPG ++VA+ G +VT++I K + F+I+D M Sbjct: 250 SLGAYAKQRIEEFKAATGRELKMEIEPGTYVVANSGHIVTRIIDKKLTNGMNFLIVDGGM 309 Query: 309 NDFMRPTLYDAYHEINYIVN----------PAGDRLHIHADIVGPICETGDFIALN---- 354 RP LY + H I + IVG CE+GD + L+ Sbjct: 310 ELLTRPLLYGSEHPIAIVSQDSTLLSSEYDQTPTAGLKSFGIVGRCCESGDSVRLDKEGN 369 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIM-VNGSQFHIIRPRMTFQE 409 I P GD + I TGAY S YNS +M + +IR + ++ Sbjct: 370 IVPVMIIEPEIGDYVVIGGTGAYSESMSPENYNSHRKPGAVMKTCSGELVLIRKKQVREQ 429 Query: 410 LIELD 414 + + + Sbjct: 430 IFQNE 434 >gi|77359149|ref|YP_338724.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis TAC125] gi|76874060|emb|CAI85281.1| diaminopimelate decarboxylase, PLP-binding [Pseudoalteromonas haloplanktis TAC125] Length = 401 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 75/399 (18%), Positives = 159/399 (39%), Gaps = 11/399 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ +L+ + +PF+ Y + + + + YA+KAN +I+ L + G Sbjct: 11 AINELSSQLDSPFFVYDLDTLNSHLAQLVA---QTEVKLWYAVKANPLSKIIQCLDNAGF 67 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S+GEL + LA V ++R++ +G K+ +I ++ G+ F ES ++++ LN++ Sbjct: 68 NFDVASKGELEQVLAQGVSSDRVLNTGPAKSPKQIKHFIERGVRTFVAESINQVRWLNEQ 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A + + RV + + + + + G+ Sbjct: 128 AKLQNCQLQVLLRVQLRWPEGEKNPLGG---DSLTPFGLGCTEWQALNITDYDALSFDGL 184 Query: 197 DMHIGSQIDQIESFHKAF-KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + + + + + +++ L+Q R N++ +D+GGGLGI Y + + D Sbjct: 185 HIFQWGNMLSTQKLSELWSQMIAPLSQLARDLNINLKILDLGGGLGIPYTQNDITLNWDD 244 Query: 256 YASL-IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + ++ +E GR+ V + G V+ K++ + VIL +N +RP Sbjct: 245 LITALAKIKKQAGVEELWMELGRYAVGECGHYAAPVVERKQNYGQQQVILSGGINHLLRP 304 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + GP+C D + + + D L + GAY Sbjct: 305 AVTSQDFPAALLR--DSHTPTQAMSLYGPLCTALDSLGEHALPSDLNEHDWLVFSQCGAY 362 Query: 375 GAVQSGTY-NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 G +S Y L E ++ ++ +R + Sbjct: 363 GFSESMPYFLCHELAGEYVLEQNKLSCLRAAEDASYYLR 401 >gi|194335990|ref|YP_002017784.1| Orn/DAP/Arg decarboxylase 2 [Pelodictyon phaeoclathratiforme BU-1] gi|194308467|gb|ACF43167.1| Orn/DAP/Arg decarboxylase 2 [Pelodictyon phaeoclathratiforme BU-1] Length = 379 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 76/382 (19%), Positives = 133/382 (34%), Gaps = 17/382 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L++LA TP + + NY F + +A+KANS + ++KT G+ Sbjct: 5 DLKQLALEHGTPLFVVDHEVLRANYREFKRHLPRVQA--YFAVKANSAKEIVKTFYDAGA 62 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S E A + + + + + I E + Sbjct: 63 SFDVASMPEFL----AVYENIKSLTPEEQQDFIWDKIIYANPIKPIPTLKELDQYKPLVT 118 Query: 137 AVSLGKKAPIA---FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + + A IA + + + KFG + L A V + Sbjct: 119 FDNEDEIAKIATYAPNTGLVLRIKVPNTGAMVELSSKFGADPGEAVDLIEKAFRSGLV-V 177 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G+ H+GSQ +++ +A L ++ ++ G+ I GG A + + P + Sbjct: 178 EGLSFHVGSQCTNFQNYIQALNLAANIFKESWERGYTQVKILDIGGGFPAPYDKNVRPFA 237 Query: 254 SDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 +II EPGRFLVA +V ++I K ++ + Sbjct: 238 ELAIMLNSEIDRLFPPDIEIIAEPGRFLVATAAWVVMEIIGTAYRDGKRCYYVNDGVYHT 297 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEK 370 ++D Y V + + GP C+ D I + + GDLLY E Sbjct: 298 FSGIIFD---HCEYPVKSFKEGNEKMCAVYGPTCDALDTITMANLLPEDLSIGDLLYSEN 354 Query: 371 TGAYGAVQSGTYNSRLLIPEIM 392 GAY S +N +++ Sbjct: 355 IGAYSHASSTYFNGFP-PAKVL 375 >gi|294633870|ref|ZP_06712427.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces sp. e14] gi|292830122|gb|EFF88474.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces sp. e14] Length = 459 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 91/394 (23%), Positives = 157/394 (39%), Gaps = 17/394 (4%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVC-YALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 + ++ AF + ++ +A+KA S V++ L G G ++ S GELR AL Sbjct: 45 IDVRGVRESVAGLHAAFTRVPDVLHTFAVKACSLVPVLRLLRETGMGCEVASPGELRLAL 104 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A P ERIV KT EI AL G+ N ++ EL ++ G + + RV Sbjct: 105 DAGFPPERIVLDAPAKTRQEIAQALTLGVA-LNADNLDELDRIDALRPP-GCASVLGLRV 162 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL-PGVKISGVDMHIGSQIDQIES 209 NP + + + +ST + KFG+ + ++ + H+GSQ + Sbjct: 163 NPQVGGGSIEAMSTATRHSKFGVALGDPGPRERVVEAFVRRPWLTRLHAHVGSQGCPLPL 222 Query: 210 FHKAFKLLRDLTQQL--RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN- 266 + L +++ R+ + +D+GGGL + + D P+ +DY + + Sbjct: 223 IAEGLAATYRLAEEINERAGRRQVGSLDLGGGLPVNFADDRTLPTYADYVAALDAAEPGL 282 Query: 267 --LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + +I+ E GR L+A G + V +K + + + + R A + Sbjct: 283 LGGRYRIVTEFGRSLLAKNGFVAAVVEYVKDAGGRRVALTHAGAHIATRTVFMPAAWPLR 342 Query: 325 YIVNPAGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 D+ GP C GD +A +R + GDL+ + TGAY Sbjct: 343 ASAYGPDGGPKRAPVLRQDVAGPCCFAGDVVAHDRALPELAEGDLVVLHDTGAYYFSTPW 402 Query: 381 TYNSRLLIPEI--MVNGSQ--FHIIRPRMTFQEL 410 YNS + F +R T +E+ Sbjct: 403 AYNSLPRPAVYGCAEADGRIVFATVRRAQTLREI 436 >gi|320159270|ref|YP_004191648.1| ornithine decarboxylase/Arginine decarboxylase [Vibrio vulnificus MO6-24/O] gi|319934582|gb|ADV89445.1| ornithine decarboxylase / Arginine decarboxylase [Vibrio vulnificus MO6-24/O] Length = 399 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 81/396 (20%), Positives = 143/396 (36%), Gaps = 20/396 (5%) Query: 11 LHAENVSLEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 L AE + + + P I + Y NA + + YALK + V++ Sbjct: 18 LSAEEIQVIETSVEQFGAPLLLLDCDVIRQQYRALKNALP--NVTLHYALKPLPHPVVVR 75 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 TL G+ D+ + GE+ + VPAE + + K +I AL G F V++ +E Sbjct: 76 TLLAEGASFDLATTGEVELVASEGVPAELTIHTHPIKRDADIRDALAYGCNVFVVDNLNE 135 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L+ + ++FR + KFG Q + A Sbjct: 136 LEKFKAYCDEVELLVRLSFRNSEAF----------ADLSKKFGCSPEQALVIIETAKEW- 184 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 ++I G+ H+GSQ + +A R + +Q+ G GG ++ Sbjct: 185 NIRIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVNYTQQV 244 Query: 250 PPSSSDYASLIHQYFG-NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P + ++ EPGRF+ A V V+ + + + LD + Sbjct: 245 MPIDQFCVPINEALSLLPETVHVLAEPGRFICAPAVTSVASVMGQAEREGQIWYYLDDGI 304 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 ++D + G+ + + + GP C++ D IA N + GDL+ Sbjct: 305 YGSFSGLMFDDARYPLTTIKQGGE--LLPSVLSGPTCDSVDVIAENILLPKLNNGDLVIG 362 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMVNG---SQFHII 401 GAY + + +N I +N +I Sbjct: 363 RTMGAYTSATATDFNFFKRAQTIALNEFVAGSERMI 398 >gi|303249621|ref|ZP_07335827.1| hypothetical protein APP6_1029 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302651554|gb|EFL81704.1| hypothetical protein APP6_1029 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 201 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 84/197 (42%), Positives = 119/197 (60%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE+VS+ + + TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MNHFNYKNQQLFAEDVSVSDIINQYGTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ + LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMVRLGSGFDIVSQGELERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 CFN+ES +EL +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + + Sbjct: 121 CFNIESIAELHRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTNEGN 180 Query: 181 LYAYASTLPGVKISGVD 197 Y + Sbjct: 181 KYWEKRYEKKHRRKTYC 197 >gi|413768|gb|AAA88795.1| ornithine decarboxylase [Caenorhabditis elegans] Length = 422 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 78/405 (19%), Positives = 149/405 (36%), Gaps = 26/405 (6%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 +++ K + F I + + + ++ YA+K N++ +I+ L Sbjct: 25 MCRDIAASKDLQENDSSFMLVDLDKIIERFQLWKRELPMIEP--FYAVKCNTDLVLIRIL 82 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 A LG G D S+ E+ + V AERI+++ KT I A+ + ++ EL Sbjct: 83 ASLGCGFDCASKDEIDIVMGTGVSAERIIYANPCKTRSFIAHAMDRDVKMMTFDNPEELL 142 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + + IA +T KFG ++ G+ Sbjct: 143 KIAKLHPNAEMILRIAVS----------DPTATCPLNLKFGADPIIAAPQLLKTASEEGI 192 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + G+ H+GS + ++ A + ++L + G + ID+GGG A H + Sbjct: 193 NVVGISFHVGSGCNDASAYRNALQHAKNLCEIGEGLGFKMDIIDMGGGFPGAEHHNPFEK 252 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS-------------IKKSAD 298 + + ++F + ++ EPGRF A LV +I + Sbjct: 253 IAETIRDALDEFFPDTNKRLYREPGRFFAAGPFSLVANIIHATEVPASKITKDPKDCADH 312 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 ++ + L+D H I + + I GP C++ D + + + Sbjct: 313 GYMYYINDGVYGSFNCILFDHAHPIGSPLFDTDRNEKFMSTIWGPTCDSLDLVEDKKLMP 372 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLI-PEIMVNGSQFHIIR 402 G+ LY GAY + T+N P +++ + IR Sbjct: 373 KMNVGEWLYYPDMGAYTLAAATTFNGFSKPVPMYVMSEEMWESIR 417 >gi|332020376|gb|EGI60797.1| Ornithine decarboxylase 2 [Acromyrmex echinatior] Length = 427 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 77/376 (20%), Positives = 130/376 (34%), Gaps = 19/376 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I + + YA+K N + VIK LA L +G D SE E+R+ Sbjct: 35 FYIVDIGDIINKHREWITKIPR--VTPHYAVKCNPDPNVIKILAALNAGFDCASEQEIRQ 92 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V A+RI+F+ K I A + I +SE EL + I Sbjct: 93 VMQYGVQADRIIFANPYKCPSHIKYAKKMNIEQITADSELELLKIKDLYSEAKIVIRIRC 152 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S KFG + + G+ + G H+GS ++ Sbjct: 153 DAKN----------SECNLGLKFGCEPDEDAVRLIQLTANLGLTLHGFSFHVGSPCGELN 202 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ + + + L +S G + GG + ++ + Sbjct: 203 AYSRGIGICKRLIAIAKSMGCQDVQLIDIGGGFLGQSGTDIDKLANIIN--DAIQDLDSS 260 Query: 269 CKIILEPGRFLVADVG----ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 ++I EPGR+ V L +K I K ++ + L ++ Sbjct: 261 IRVISEPGRYYVESAFTLASFLHSKKIVHKNGKFMRMYYANIGTYNSFLDELICPNTKVL 320 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 I+ + + GP C++ D IA + + GD L E GAY S T+N Sbjct: 321 RILFEPASDEKFLSTLWGPTCDSFDVIAKDVLLPELHIGDWLVWENVGAYSLCLSTTFNG 380 Query: 385 RLLIPEI-MVNGSQFH 399 + I + +Q+ Sbjct: 381 FPIPKVIPFIRKTQWE 396 >gi|322696105|gb|EFY87902.1| ornithine decarboxylase [Metarhizium acridum CQMa 102] Length = 427 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 78/377 (20%), Positives = 130/377 (34%), Gaps = 36/377 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L + + YA+K N + V++ LA LG+G D S+GE+ + Sbjct: 46 FFVADLGEVYRQHLRWKKNLPRIKP--FYAVKCNPDPKVLRLLAELGTGFDCASKGEIEQ 103 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA ERI+++ KT + +G+ ++ EL + + I Sbjct: 104 VLAMGTTPERIIYAQPCKTNSYVRFVKNAGVKQMTFDNADELYKIAKLYPEAELFLRIM- 162 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A A L + + GV H+GS Sbjct: 163 ---------TDDASSLCRLSMKFGAAMDTTEGLLAVAKNLG-LNVVGVSFHVGSGASDPL 212 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + + QQ G ++ +DVGGG + Sbjct: 213 AFCKAVRDAHTVFQQAAEFGFAMRTLDVGGGFCGDTFEQMSGVLRDAL---DEFFPAGNG 269 Query: 269 CKIILEPGRFLVADVGILVTK------VISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 II EPGR+ V+ + V V ++ + ++D H Sbjct: 270 IDIIAEPGRYYVSTAFTIACNIIARRTVEDPTLDGKGYMVYINDGVYGNFSSIMFDHQHP 329 Query: 323 -------------INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYI 368 N + + GP C+ D I+ + + GD LY Sbjct: 330 VAKILRSDGRTLYNTASANACNAGEGVEYSVWGPTCDGIDRISESIRFETILNVGDWLYF 389 Query: 369 EKTGAYGAVQSGTYNSR 385 E GAY + +N Sbjct: 390 EDMGAYTKCSATQFNGF 406 >gi|121551083|gb|ABM55741.1| ornithine decarboxylase [Epichloe festucae] Length = 445 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 83/377 (22%), Positives = 140/377 (37%), Gaps = 36/377 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + +L + + YA+K N + V+ LA LG+G D S+GE+ + Sbjct: 64 FYVADLGDVYRQHLRWKKNLPRVKP--FYAVKCNPDPQVLHLLAELGTGFDCASKGEIEQ 121 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L +RI+++ KT + G+ ++ EL + + I Sbjct: 122 VLGMGTSPDRIIYAQPCKTNSYVRFVKSVGVKQMTFDNADELYKIAKLYPEAELFLRIM- 180 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A A L + + GV H+GS Sbjct: 181 ---------TDDTSSLCRLSMKFGAAMDTTEGLLAVARDLG-LNVVGVSFHVGSGASDPL 230 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F+KA + + QQ GH+++ +DVGGG + + Sbjct: 231 AFYKAVRDAHIVFQQGAELGHSLRTLDVGGGFCGDTFEQMAGVLREAL---DEFFPDGNK 287 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT------FVILDVAMNDFMRPTLYDAYHE 322 II EPGR+ V+ + VI+ + D T V ++ + ++D Sbjct: 288 VDIIAEPGRYYVSTAFTIACNVIARRTVEDPTLDGKGYMVYVNDGVYGNFSSIMFDHQQP 347 Query: 323 INYI-------------VNPAGDRLHIHADIVGPICETGDFIALN-RKIALPRPGDLLYI 368 + I NP + + GP C+ D I+ + R ++ GD LY Sbjct: 348 VAKILRASGRTLYNSAAANPCSAGDGVEYSVWGPTCDGIDRISESVRFDSILDVGDWLYF 407 Query: 369 EKTGAYGAVQSGTYNSR 385 E GAY + +N Sbjct: 408 EDMGAYTKCSATQFNGF 424 >gi|152990247|ref|YP_001355969.1| diaminopimelate decarboxylase [Nitratiruptor sp. SB155-2] gi|151422108|dbj|BAF69612.1| diaminopimelate decarboxylase [Nitratiruptor sp. SB155-2] Length = 443 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 96/422 (22%), Positives = 169/422 (40%), Gaps = 32/422 (7%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--ALKANSNQAVIK 69 + V +E+L +P + +S +IE+ Y F AF V + + K N A+ + Sbjct: 33 EIDGVLVEELIKQYGSPLFVFSQNSIEEKYQEFKQAFTSRYPEVEFWWSYKTNYLDAICQ 92 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 LGS ++VS E +A +P + I+F+G K + + A+Q G ++ E Sbjct: 93 IYHDLGSKAEVVSAFEYDKARRLGMPGKDIIFNGPYKPKEALKKAVQEGAKIH-IDHWYE 151 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + L A LG + P+A R N + + +FG I + A Sbjct: 152 INDLESIADELGIEIPVAIRCNMNTG--------IYPQWSRFGFNIDNGEAYDAIERIYE 203 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR---SNGHNIQHIDVGGGLG----- 241 G K+ +H + + A + + + + R G+ +++ID+GGG Sbjct: 204 GKKLYITGLHAHIGTFMLSAHAYAEETKKLIQLKNRISADFGYEVEYIDIGGGFASKNRL 263 Query: 242 --IAYHSDHRPPSSSDYASLIHQYFGNLQ----CKIILEPGRFLVADVGILVTKVISIKK 295 I + PS +YA + K+ LE GR L+ + G L+T V + K+ Sbjct: 264 KGIYQPPEVVVPSPDEYAEAVTGAIFEYNEGNLPKLFLETGRALIDEAGYLLTSVFASKR 323 Query: 296 S-ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 K I+D +N Y+ ++ + L+ + I GP+C D IA N Sbjct: 324 LLDGKKSYIVDAGVNLLYTAFWYNFDI----ALDKRYEGLNEPSQINGPLCMNIDTIAEN 379 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG-SQFHIIRPRMTFQELIEL 413 + G +L I GAY QS + ++++ H+IR + + E Sbjct: 380 IMLPPLPRGSILSIWPVGAYNVTQSMQFIQY-RPRVVLIDKEGSTHLIREADDLEYVREK 438 Query: 414 DS 415 + Sbjct: 439 EI 440 >gi|291289439|emb|CBK55649.1| ornithine decarboxylase [Metarhizium anisopliae] Length = 447 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 78/377 (20%), Positives = 132/377 (35%), Gaps = 36/377 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L + + YA+K N + V++ LA LG+G D S+GE+ + Sbjct: 66 FFVADLGEVYRQHLRWKKNLPRIKP--FYAVKCNPDPKVLRLLAELGAGFDCASKGEIEQ 123 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA ERI+++ +T + +G+ ++ EL + + I Sbjct: 124 VLAMGTTPERIIYAQPCETNSYVRFVKNAGVKQMTFDNADELYKIAKLYPEAELFLRIM- 182 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + SL A A L + + GV H+GS Sbjct: 183 ---------TDDASSLCRLSMKFGATMDTTESLLAVAKNLG-LNVVGVSFHVGSGASDPL 232 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F+KA + + QQ G ++ +DVGGG + Sbjct: 233 AFYKAVRDAHAVFQQAAEFGFTMRTLDVGGGFCGDTFEQMSSVLRDAL---DESFPAGNG 289 Query: 269 CKIILEPGRFLVADVGILVTK------VISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 II EPGR+ V+ + V V ++ + ++D H Sbjct: 290 IDIIAEPGRYYVSTAFTIACNIIARRTVEDPTLDGKGYMVYINDGVYGNFSSIMFDHQHP 349 Query: 323 -------------INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYI 368 N + + GP C+ D I+ + + GD LY Sbjct: 350 VAKILRSNGRTLYNTASANACSAGEGVXYSVWGPTCDGIDRISESIRFETILNVGDWLYF 409 Query: 369 EKTGAYGAVQSGTYNSR 385 E GAY + +N Sbjct: 410 EDMGAYTKCSATQFNGF 426 >gi|322706473|gb|EFY98053.1| ornithine decarboxylase [Metarhizium anisopliae ARSEF 23] Length = 447 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 79/377 (20%), Positives = 132/377 (35%), Gaps = 36/377 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L + + YA+K N + V++ LA LG+G D S+GE+ + Sbjct: 66 FFVADLGEVYRQHLRWKKNLPRIKP--FYAVKCNPDPKVLRLLAELGAGFDCASKGEIEQ 123 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA ERI+++ KT + +G+ ++ EL + + I Sbjct: 124 VLAMGTTPERIIYAQPCKTNSYVRFVKNAGVKQMTFDNADELYKIAKLYPEAELFLRIM- 182 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + SL A A L + + GV H+GS Sbjct: 183 ---------TDDASSLCRLSMKFGAAMDTTESLLAVAKNLG-LNVVGVSFHVGSGASDPL 232 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F+KA + + QQ G ++ +DVGGG + Sbjct: 233 AFYKAVRDAHAVFQQAAEFGFTMRTLDVGGGFCGDTFEQMSSVLRDAL---DEFFPAGNG 289 Query: 269 CKIILEPGRFLVADVGILVTK------VISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 II EPGR+ V+ + V V ++ + ++D H Sbjct: 290 IDIIAEPGRYYVSTAFTIACNIIARRTVEDPTLDGKGYMVYINDGVYGNFSSIMFDHQHP 349 Query: 323 -------------INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYI 368 N + + GP C+ D I+ + + GD LY Sbjct: 350 VAKILRSNGRTLYNTASANACNAGEGVEYSVWGPTCDGIDRISESIRFETILNVGDWLYF 409 Query: 369 EKTGAYGAVQSGTYNSR 385 E GAY + +N Sbjct: 410 EDMGAYTKCSATQFNGF 426 >gi|154320654|ref|XP_001559643.1| hypothetical protein BC1G_01799 [Botryotinia fuckeliana B05.10] gi|150853488|gb|EDN28680.1| hypothetical protein BC1G_01799 [Botryotinia fuckeliana B05.10] Length = 531 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 86/375 (22%), Positives = 145/375 (38%), Gaps = 36/375 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + ++ + + YA+K N + VI+ LA LG+G D S+GE+ + Sbjct: 154 FFVADLGEVYRQHMRWKKNLPRVKP--FYAVKCNPDPQVIRLLAELGTGFDCASKGEIEQ 211 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L A + RI+++ KT + A ++G+ ++ EL + + I Sbjct: 212 VLKAGIDPTRIIYAQPCKTNSYVRYAEKNGVKQMTFDNSDELYKIKKLFPGAELFLRI-- 269 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +T S + KFG + ++L A A L + + GV H+GS Sbjct: 270 --------STDDSSSLCRLSLKFGAAMDATNNLLALARELD-LNVVGVSFHVGSGASDPL 320 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + + +Q R+ G+ + +DVGGG S + + Sbjct: 321 AFRKAVQDAHTVFEQARNFGYYMHTLDVGGGFCTETFEVMASVLSDAL-----EEYMPKN 375 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADK------TFVILDVAMNDFMRPTLYDAYHE 322 KII EPGR+ VA+ L VI+ + D + L+ + ++D + Sbjct: 376 IKIIGEPGRYYVANAFTLACNVIARRTVEDPESLEKSYMLYLNDGLYGNFSSIMFDHQNP 435 Query: 323 INYIVNPAGDR-----------LHIHADIVGPICETGDFI-ALNRKIALPRPGDLLYIEK 370 I ++ I GP C+ D I A R GD LY E Sbjct: 436 IAQVLQTGNRSYFNTLESCATLEGTEYSIWGPTCDGIDRISASIRFNHNLDVGDWLYFES 495 Query: 371 TGAYGAVQSGTYNSR 385 GAY + +N Sbjct: 496 MGAYTKCSATRFNGF 510 >gi|115397981|ref|XP_001214582.1| ornithine decarboxylase [Aspergillus terreus NIH2624] gi|114192773|gb|EAU34473.1| ornithine decarboxylase [Aspergillus terreus NIH2624] Length = 443 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 87/369 (23%), Positives = 139/369 (37%), Gaps = 30/369 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + ++ + YA+K N + +++ +A LG+G D S+ E+ Sbjct: 72 FYVADMGEVYRQHMRWKMNLGR--VRPFYAVKCNPDPEILRLMAKLGNGFDCASKAEIDL 129 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 ALA V RI+++ KT + A Q G+ ++ EL + I Sbjct: 130 ALATGVDPARIIYAQPCKTKSYLRYAAQKGVKQMTFDNADELYKIKACFPDAELYLRIL- 188 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + H L A L +K+ GV H+GS + Sbjct: 189 ---------TDDSTSLCRLSMKFGASLDVAHQLLELARDLE-LKVVGVSFHVGSGAEDPS 238 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q GH + +DVGGG S + Sbjct: 239 AFLKAVQDARLVFDQAADLGHELHTLDVGGGFTGETFEKFAGVLSEAL-----DTYFPPH 293 Query: 269 CKIILEPGRFLVADVGILVTKVISIK-------KSADKTFVILDVAMNDFMRPTLYDAYH 321 +II EPGR+ VA L VI+ + + D + L+ + ++D H Sbjct: 294 VRIIAEPGRYYVASAFTLAANVIARRDVRDPEDPNNDAYMIYLNDGVYGNFSNIIFDHQH 353 Query: 322 EINYIVNPAGDRLHIH----ADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGA 376 + I+ A I GP C+ D I + L GD L+ E+ GAY Sbjct: 354 PVAQILTCANGPNAATSGIAYSIWGPTCDGIDVITQRITLPGLLDVGDWLFFEEMGAYTR 413 Query: 377 VQSGTYNSR 385 + +N Sbjct: 414 CSATRFNGF 422 >gi|329941101|ref|ZP_08290380.1| decarboxylase [Streptomyces griseoaurantiacus M045] gi|329299632|gb|EGG43531.1| decarboxylase [Streptomyces griseoaurantiacus M045] Length = 472 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 98/409 (23%), Positives = 163/409 (39%), Gaps = 23/409 (5%) Query: 26 QTPFY-CYSTTAIEKNYLTFSNAF-----DGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 TP T I AF G + +A+KA+ V++ L G G + Sbjct: 52 GTPVAGLLDVTGIRNAAAELRAAFEAVLPPGTPVLHAFAVKASPLVPVVRLLRAAGIGAE 111 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 + S GEL A AA VP ER V KT E+ AL GI N ++ EL ++ S Sbjct: 112 VASAGELALARAAGVPPERTVLDSPAKTPAELREALALGIA-VNADNPQELARIDALVRS 170 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDM 198 ++P+ RVNP + + +ST KFG+ + + ++ + Sbjct: 171 APTRSPLGVRVNPQVGGGSIGALSTATTTSKFGVALRDAGAREWLLRAYAERPWLTRLHA 230 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQ--LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GSQ + + L ++ R+ + +D+GGGL + + SD P+ + Y Sbjct: 231 HVGSQGIPPALMVRGLGEVYALAEEINRRAGRRQVDTLDIGGGLPVDFGSDASAPTYARY 290 Query: 257 ASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 A L+ + + + ++ E GR L+A G LV +V K + + + + R Sbjct: 291 ARLLAEAVPGLMDGRYGLVTEFGRSLLAKHGTLVARVEYTKAAGGRAVAVTHAGVQVATR 350 Query: 314 PTLYDAYHEIN----YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + + + D+ GP C GD +A R + PGD++ Sbjct: 351 TVYAPHAWPLRIAAYDTEGRPKEGPPVVQDVAGPACFAGDLLAEGRPLPELAPGDVVAAP 410 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV------NGSQFHIIRPRMTFQELIE 412 TGAY YNS + +G +F +R T +E++ Sbjct: 411 DTGAYSFAHHYAYNSLPRVGVYGYVAEDGADGVRFATVREPQTVREIVA 459 >gi|39997633|ref|NP_953584.1| carboxynorspermidine decarboxylase [Geobacter sulfurreducens PCA] gi|39984525|gb|AAR35911.1| carboxynorspermidine decarboxylase [Geobacter sulfurreducens PCA] Length = 400 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 73/405 (18%), Positives = 133/405 (32%), Gaps = 23/405 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 E L+ + ++K+ + +P Y + N + ALKA + +V Sbjct: 12 EKVLNLTGIDIDKILKLAPSPAYVVDLGRLRHNLAILDQVQRRSGAKILMALKAFAMWSV 71 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G+ S E R E F+ K D ++L S FN ++ Sbjct: 72 FPIIRETLHGVCASSPWEARLGREEFGR-EVHSFAAAFKESDVVELLQTSNHLVFNSFNQ 130 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E + + RVNP+ + + GIP + Sbjct: 131 LERFRP--LWEKERGRVSVGLRVNPEHSEGHTPIYDPCAPASRLGIP--RREFDGRSLEG 186 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 + G+ + + + + ++ H ++ +++GGG +H Sbjct: 187 VEGLHFHTLCEQLF---------EPLARTAKVFEEKFGPFLHGMKWLNLGGG----HHIT 233 Query: 248 HRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 LI + ++ LEPG + GILV +V+ + + ILDV+ Sbjct: 234 REGYDIDALVELITYFKRKYGVEVYLEPGEAIAIGTGILVGEVLDVVH-NEMDIAILDVS 292 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 M L Y G++ H + GP C GD I +PGD L Sbjct: 293 ATCHMPDVLEMPYRPGITAGFDPGEKAH-TYRLAGPSCLAGDVIGDWSFDKPLKPGDRLV 351 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMV--NGSQFHIIRPRMTFQEL 410 E Y V++ T+N + ++R +++ Sbjct: 352 FEDMSHYTMVKTTTFNGIQHPAICTFEPETGELRVVRK-FGYEDF 395 >gi|302867092|ref|YP_003835729.1| Orn/DAP/Arg decarboxylase 2 [Micromonospora aurantiaca ATCC 27029] gi|302569951|gb|ADL46153.1| Orn/DAP/Arg decarboxylase 2 [Micromonospora aurantiaca ATCC 27029] Length = 415 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 91/386 (23%), Positives = 162/386 (41%), Gaps = 14/386 (3%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP Y Y + ++ T A + + Y+LKAN + A++ L G +I S G Sbjct: 6 FDTPAYRYDLARVRASHATLVAALP-APSRLFYSLKANPHPALVAALHTAGCDAEICSPG 64 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 EL AL A VP +R++++G GK E+ A+++G+ F+V+S + L ++ A + G + Sbjct: 65 ELAAALRAGVPGDRMLYTGPGKRDAEVAGAVRAGVRWFSVDSPAGLDQADRIAAAHGVEV 124 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 RVN + TG +FG + I + P + G ++ GS + Sbjct: 125 HCLLRVNDRVPNPGQGLTMTGVAS-QFGADVDWIEQEPQRFRSRPSAPVRGFHLYTGSNV 183 Query: 205 DQIES-FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH-- 261 D +++ + R + G ++ +D+GGG G + + A + Sbjct: 184 DSVDALVAQFTAAARTARRLRDLLGIDLTLLDLGGGFGAPFARPGHNADLTGLADRVATA 243 Query: 262 -----QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP-- 314 + + ++ E GRFL A G L+T+V+ +K+S V+L+ +N Sbjct: 244 LDDLFPAWRDGTPEVAFESGRFLTATAGTLLTRVLDVKRSQGTPVVVLESGINHLGGMSG 303 Query: 315 -TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + + A + GP+C D A + RPGD+L + GA Sbjct: 304 LRRLPPLVPALHAADGRDGAPLEAAIVAGPLCTPLDTWARAANLPDVRPGDVLAVPNVGA 363 Query: 374 YGAVQS-GTYNSRLLIPEIMVNGSQF 398 YG S + E++ +G + Sbjct: 364 YGLSASLLAFLGHPAPVEVVCDGDRV 389 >gi|269964929|ref|ZP_06179099.1| Diaminopimelate decarboxylase [Vibrio alginolyticus 40B] gi|269830405|gb|EEZ84629.1| Diaminopimelate decarboxylase [Vibrio alginolyticus 40B] Length = 199 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 79/195 (40%), Positives = 117/195 (60%), Gaps = 4/195 (2%) Query: 225 RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVG 284 ++ G NI+H+DVGGGLG+ Y + P S +L+ + + ++I EPGR + A+ G Sbjct: 8 KAQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAG 67 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 IL+T+V +K + K F I+D AMND MRP LY A+ +I + G+ D+VGPI Sbjct: 68 ILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVPVSPRKGEA--QTYDLVGPI 125 Query: 345 CETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPR 404 CETGDF+ +R + + + GDLL + GAYG V S YN+R E+MV+G Q H++R R Sbjct: 126 CETGDFLGKDRAL-VLQEGDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGKQSHLVRQR 184 Query: 405 MTFQELIELD-SIPA 418 L +L+ +P Sbjct: 185 EELTSLWQLEQILPE 199 >gi|85708790|ref|ZP_01039856.1| ornithine/diaminopimelate/arginine decarboxylase, family 2 [Erythrobacter sp. NAP1] gi|85690324|gb|EAQ30327.1| ornithine/diaminopimelate/arginine decarboxylase, family 2 [Erythrobacter sp. NAP1] Length = 410 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 98/399 (24%), Positives = 165/399 (41%), Gaps = 16/399 (4%) Query: 7 FEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 +G L + L TP + YS + ++ A V +A+KAN + Sbjct: 16 IDGELAVGGRTASDLVEAAGRTPLFVYSRSHLDLRTAELRAALPK-RIGVNFAVKANPHP 74 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 AVI +A L G D+ S GEL + + R+ F+G GK DE++ A+ +G N E Sbjct: 75 AVIAHMAPLVDGFDVASSGELAKLQETGIDPSRVSFAGPGKRDDELEAAIVAGAT-LNCE 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 SE E + A +G IA RVNPD G + FG+ ++ +L Sbjct: 134 SEGEGERALAIAQRVGTAPRIAIRVNPDFELKGSGMKMGGGAK-PFGVDAERVPALAQTL 192 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGGGLGIAY 244 G + G+ + GSQ ++ +A + DL ++ ++ +++GGG GI Y Sbjct: 193 ID-GGAEWRGLHIFTGSQALSADAIIEAQGNVIDLAARISNDIGEGLPKLNMGGGFGIPY 251 Query: 245 HSDHRPPSSSDYASLIHQYFGN-----LQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 P + + + + ++ LE GR+LV + G+ + +VI K S Sbjct: 252 FPGDEPLDLPAVGNALKERTADLPESLSDTELCLELGRYLVGEAGVYLCRVIDRKVSHGV 311 Query: 300 TFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 T+++ D ++ + I N G ++VG +C D +A Sbjct: 312 TYLVTDGGLHHQLAASGNFGTVVRRNYPVAIANRFGCEGDDVVNVVGCLCTPLDRLADAA 371 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 + GDL+ + GAYGA S + E++V Sbjct: 372 LLPRAEVGDLVAVFCAGAYGATASPENFLGHGPAAEMLV 410 >gi|88858624|ref|ZP_01133265.1| diaminopimelate decarboxylase, PLP-binding protein [Pseudoalteromonas tunicata D2] gi|88818850|gb|EAR28664.1| diaminopimelate decarboxylase, PLP-binding protein [Pseudoalteromonas tunicata D2] Length = 401 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 82/398 (20%), Positives = 156/398 (39%), Gaps = 11/398 (2%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + L PF+ Y + + + + YA+KAN +VI+TL G Sbjct: 12 INALVQTQDHPFFIYDLDQLAAHLAPLTA---QNVVKLWYAVKANPLSSVIQTLDKAGFN 68 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+ S GEL + L + AER++ +G K+ +I+ L++G+ F ES +++ LNQ A Sbjct: 69 FDVASAGELNQVLKQGIAAERVLNTGPAKSKKQINHFLEAGVRTFVAESLNQVAWLNQAA 128 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + I RV + + + + P + G+ Sbjct: 129 QNHQVQLRILLRVQLRWPEGEKNPLGGNSLTPFG---LGTQQWQHLNIADYPQLNFVGLH 185 Query: 198 MHIGSQIDQIESFHKAF-KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + + + +++ L G ++ +D+GGGLGI Y + P + Sbjct: 186 IFQWGNMLSTDKLAQLWSQMIAPLQALADQLGFALEILDLGGGLGIPYTTAQDPLNWPQL 245 Query: 257 ASL-IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 + F + ++ +E GR+ V + G V V+ K++ +I +N +RP Sbjct: 246 LDALSNIKFESGVNELWMELGRYAVGECGHYVNPVVEQKENFGYHQLITAGGINHILRPA 305 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + + + I GP+C D + ++ A D + + GAYG Sbjct: 306 VTNQAFPAQLLRQSNAPAREFL--IHGPLCTALDSLGTHQLPADLNENDHVIFSQVGAYG 363 Query: 376 AVQSGTY-NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 +S Y L E ++ +Q +R T + Sbjct: 364 FTESMPYFLCHELAAEYVIENNQVRCVRSCETADYYLR 401 >gi|148554414|ref|YP_001261996.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1] gi|148499604|gb|ABQ67858.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1] Length = 401 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 80/389 (20%), Positives = 142/389 (36%), Gaps = 8/389 (2%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQA 66 G L +E LA P + Y + N A + YA+K N Sbjct: 17 GRLIFAGADVETLARAHDGPLFVYGAGRVRANLNRLRGALGASGCAHRIYYAMKCNRFAP 76 Query: 67 VIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ LA G+ G+DI S EL ALA A I F+G ++D L N + Sbjct: 77 LLEMLAADGAVGVDICSPDELDLALACGFRAGDISFTGTSVADRDLDRLLVHDDLHINCD 136 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 S +++ + +R I R+NP + Sbjct: 137 SLGQIRRIGERRPGRA----IGIRINPGFGTGYGDSARLTYAGARTTKFGIYREQWAEAL 192 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + +H + A+ ++ +++GGGLG+ + Sbjct: 193 GLAARHDLRITAIHFHVGCGYLSGQLDAWDRAVGAAADFLADLPEATTVNIGGGLGLPHR 252 Query: 246 SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + P + ++S++ ++FG + +EPG +LV D G+L+ V+ +++ D FV +D Sbjct: 253 AGDAPLDLARWSSIVARHFGGRGLTVAIEPGDYLVKDAGLLLLSVVGVERKRDTLFVAVD 312 Query: 306 VAMNDFMRPTLYD-AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 N P YD + ++ + G I E D A + + GD Sbjct: 313 GGFNLHPEPAHYDLPCEPVACVLREPDPARWQPVSVAGNINEALDLWAEDHPMPPLEEGD 372 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + + G YG+ S + R E++V Sbjct: 373 HVALINAGGYGSAMSSNHCMRGAFTELLV 401 >gi|315040125|ref|XP_003169440.1| ornithine decarboxylase [Arthroderma gypseum CBS 118893] gi|311346130|gb|EFR05333.1| ornithine decarboxylase [Arthroderma gypseum CBS 118893] Length = 460 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 88/385 (22%), Positives = 141/385 (36%), Gaps = 45/385 (11%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY I + ++ + + YA+K N N V++ +A LG+G D S+ E+ Sbjct: 73 PFYVADLGEIYRQHIRWKTNLPRVKP--FYAVKCNPNPQVLRLMAVLGNGFDCASKAEID 130 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA V RI+++ KT + A Q G+ ++ EL + I Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQIGVKQMTFDNTDELYKIKDMCPDAELYLRIL 190 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + L A TL + + GV H+GS + Sbjct: 191 ----------TDDSASLCRLSMKFGASLSSARPLLELAHTLG-LNVVGVSFHVGSGAEDP 239 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +SF KA + R + + G +++ +DVGGG + Sbjct: 240 KSFIKAVQDARFVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGEAL-----DTYFPP 294 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSA------------------------DKTFVI 303 ++I EPGR+ VA L VI+ + + Sbjct: 295 HIRVIAEPGRYYVATAFTLAANVIARRDVGAEEPLSDSESDSASPSRASTPTSSGAYMIY 354 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGD--RLHIHADIVGPICETGDFIALNRKIA-LP 360 L+ + ++D H + I+ D I I GP C+ D I+ + L Sbjct: 355 LNDGVYGNFSNIVFDHQHPVAQILTKDDDYTSAPIEYSIWGPTCDGIDVISKRITLNGLL 414 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSR 385 G+ LY E GAY + +N Sbjct: 415 GVGNWLYFENMGAYTQCSATRFNGF 439 >gi|93006103|ref|YP_580540.1| Orn/DAP/Arg decarboxylase 2 [Psychrobacter cryohalolentis K5] gi|92393781|gb|ABE75056.1| Orn/DAP/Arg decarboxylase 2 [Psychrobacter cryohalolentis K5] Length = 421 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 91/390 (23%), Positives = 148/390 (37%), Gaps = 24/390 (6%) Query: 26 QTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 +P Y Y A+E+ T +T + YA+KAN+ ++ TLA G + S Sbjct: 34 PSPLCAYIYDLEALEERITTMKRCLPD-NTQLFYAIKANAEPKILSTLAEHVDGFEAASA 92 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GEL P I+F G GK ++ A+ I +VES EL + + +L Sbjct: 93 GELNWLQT-HQPNHPIIFGGPGKLTSDLQQAIHQQIDTIHVESLVELTRIQILSQALQLP 151 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 I R+N DI K+ G K FG+ + A + P ++ G H+ S Sbjct: 152 VRIFLRMNIDIGDIGSSKLVMGGKPTPFGLDETHLKQALAIIDSSPFIEFCGFHFHLMSH 211 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQ---HIDVGGGLGIAYHSDHRPPSSSDYASLI 260 +E + ++ ++ + + ++ I+VGGG+GI Y + + + Sbjct: 212 QLSVERHLLLMQRYMEMVKKWQHDYPSLPSNLTINVGGGIGIHYDQQPQHFEWEVFCQQL 271 Query: 261 HQYFGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + E GRF+ A G V +V+ IKK+ +TFVI + F P Sbjct: 272 ASILTANLQFTVRFEIGRFITAPCGYYVMEVLDIKKNLGETFVIGHGGTHHFRTPAAQQH 331 Query: 320 YHEINYIVNPAGDRLH---------------IHADIVGPICETGDFIALNRKIALPRPGD 364 H + + A +VG +C D +A ++ I GD Sbjct: 332 NHPFFIVPRRMSHAMENKLQANLIEQAAITGTKATLVGQLCTPKDILAKDQWIDALHIGD 391 Query: 365 LLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 L GAY S + I + Sbjct: 392 YLVFTLAGAYAWNISHQNFLMHQPPKMIFL 421 >gi|49474545|ref|YP_032587.1| ornithine decarboxylase [Bartonella quintana str. Toulouse] gi|49240049|emb|CAF26473.1| Ornithine decarboxylase [Bartonella quintana str. Toulouse] Length = 377 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 93/377 (24%), Positives = 152/377 (40%), Gaps = 20/377 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + P + +NYL F A + YA+KAN ++ LA LGS D S Sbjct: 14 RFEGPCLIVDLDVVRENYLNFEKALPQS--RIFYAIKANPAPEILNLLASLGSSFDAASV 71 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E+ AL A +RI F K +I A GI + V+ E++ + + A + Sbjct: 72 AEIEMALKAGATPDRISFGNTIKKERDIVQAYALGISLYAVDCVEEVEKIARAAPGVRVF 131 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + T K + KFG + + +A L ++ GV H+GSQ Sbjct: 132 CRVL----------TDGKGAEWPLSRKFGCVPAKAVDVLRHAHQLG-LQAHGVSFHVGSQ 180 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIH 261 + ++ +A + + L G +++ I++GGG Y D + + Sbjct: 181 QTDLRAWDRALSDAATVFRHLEQEGISLKLINMGGGFPTRYLKDVPTTQAYGTVVFDSLK 240 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 +YFGN + I+EPGR +V + G++ T+V+ I K AD V Sbjct: 241 KYFGNRIPETIIEPGRGMVGNAGVIRTEVVLISKKADNDNVRWVYLDVGKFNGLTETMDE 300 Query: 322 EINYIVN-PAGDRLHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAV 377 I Y + P D+ + GP C++ D + + L GD L I TGAY A Sbjct: 301 AIRYPIETPHDDKAMEPCILAGPTCDSADVLYEKTPYLLPLSLTVGDELLIHGTGAYTAT 360 Query: 378 QSGT-YNSRLLIPEIMV 393 + +N +P ++ Sbjct: 361 YASVAFNGFEPLPSYVI 377 >gi|313623109|gb|EFR93382.1| diaminopimelate decarboxylase [Listeria innocua FSL J1-023] Length = 325 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 92/323 (28%), Positives = 151/323 (46%), Gaps = 13/323 (4%) Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 K+ +EI +AL GI CF +++ E+ L + +KA + RV P I A+TH I Sbjct: 1 NNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEKAAVLIRVTPGIEAHTHDYIL 60 Query: 164 TGKKEDKFGIPIHQIHSLYAY---ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL 220 TG+ + KFG + + A + G+ HIGSQI + F A + + D Sbjct: 61 TGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDK 120 Query: 221 -TQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY-------FGNLQCKII 272 + + G + + +++GGG G+ Y ++ P S+Y I +I Sbjct: 121 LVEWHGTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEVRDVANSNDIAIPEIW 180 Query: 273 LEPGRFLVADVGILVTKVISIKKSAD-KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 +EPGR LV + G + KV S K+ + ++ +D M+D +RP LYDA+++ NP Sbjct: 181 IEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPE- 239 Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 I G CE+GD + + + G++L + TGAYG + YN P + Sbjct: 240 KVAEETVAIAGKCCESGDMLIWDLPLPKSDAGEILAVFCTGAYGYAMASNYNRIPRPPVV 299 Query: 392 MVNGSQFHIIRPRMTFQELIELD 414 V +I R T++ L++ D Sbjct: 300 FVENGMDKLIVARETYENLVQND 322 >gi|302854271|ref|XP_002958645.1| hypothetical protein VOLCADRAFT_84542 [Volvox carteri f. nagariensis] gi|300256034|gb|EFJ40311.1| hypothetical protein VOLCADRAFT_84542 [Volvox carteri f. nagariensis] Length = 562 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 78/371 (21%), Positives = 136/371 (36%), Gaps = 27/371 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY +++ + + A M YA+K N ++K L +G+G D S+GEL Sbjct: 177 FYVVDLANVQRMFKAWRAAMPR--VMPYYAVKCNPEPGILKLLVAMGAGFDCASKGELDM 234 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+F+ K +I A GI ++ SEL ++Q I Sbjct: 235 MLRMGVSPSRIIFAHPCKRASDIRYARDHGIQYTTFDTVSELYKISQMNPDFKCVLRIR- 293 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + K+G + + L A L + + GV H+GS + Sbjct: 294 ---------ADDPDARVPLGLKYGAEVSEAPVLLQTAKDLG-LHVVGVSFHVGSACQNLS 343 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI----HQYF 264 +F A + R + + + G +++ +D+GGG + ++ + Sbjct: 344 TFSGAIENARKVFDEAHTLGFHMELLDIGGGFTGHFDEMGNVMFGEIANTINTALAAHFP 403 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISI-----KKSADKTFVILDVAMNDFMRPTLYDA 319 + ++I EPGR+ L+T V A K L + LYD Sbjct: 404 PEMGVRVIAEPGRYFAETSSTLLTPVYGQRDRVAHDGAVKKDYWLTDGLYGSFNCILYDG 463 Query: 320 YHEINYIVN-----PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 +V D + + GP C++ D + + ++ + R GD L GAY Sbjct: 464 QSPAYKVVRSPLLPEPADIRTFTSTLWGPTCDSADCVYKDVQLPVLRNGDWLMWNNAGAY 523 Query: 375 GAVQSGTYNSR 385 + +N Sbjct: 524 TVAGACDFNGI 534 >gi|120564762|gb|ABM30201.1| PvsE [Vibrio alginolyticus] Length = 400 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 87/368 (23%), Positives = 153/368 (41%), Gaps = 13/368 (3%) Query: 18 LEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + LA P Y Y +A+E++ + + + YA KAN + ++KTLA Sbjct: 15 VHTLAQQQSQPLCAYVYDLSALEEHIKQLRHVLPR-NVELFYAAKANPSGPILKTLAPYV 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S GEL + + ++F G GK + E+ A++ + F+VES +EL+ + Sbjct: 74 DGFEAASGGELTHLHQQQLD-KPLIFGGPGKMLSELQQAIELDVDAFHVESLTELQRIGA 132 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 L + A I R+N DI T K++ G K FG+ ++ + P V + G Sbjct: 133 LTERLNRPASIFLRMNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKG 192 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI-DVGGGLGIAYHSDHRPPSSS 254 H+ S +E + + + + + + ++GGG+GI Y + + Sbjct: 193 FHFHLMSHQLDVERHLALMQRYFQVVKTWQQEFKLSELMINLGGGMGINYQNPEQHFPWM 252 Query: 255 DYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ + + E GRF+ A G V +V+ IK++ + FVI + F Sbjct: 253 EFCDKLEFLIAKEQVQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHF 312 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIH-----ADIVGPICETGDFIALNRKIALPRPGDLL 366 P H + + + A VG +C D +A N+ +A GD + Sbjct: 313 RTPAAQSHDHPFVILKSEQHHEISHPIQHAQATFVGQLCTPKDVLARNQHVAHVDIGDYV 372 Query: 367 YIEKTGAY 374 GAY Sbjct: 373 VFTLAGAY 380 >gi|159030424|emb|CAO91325.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 569 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 82/412 (19%), Positives = 158/412 (38%), Gaps = 8/412 (1%) Query: 1 MSAFKYFEGSL--HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA 58 M + EG + ++ +E++A +P Y + + +N F G + V Y Sbjct: 1 MDKSEIIEGIMETWTRSIDIEEIAKRHGSPLYILNVGQLRRNLSHFVE-LVGSPSQVAYP 59 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN + A++ L LG D S+ E+ AL+ P RI ++ + L G Sbjct: 60 VKANPSMAILNELVSLGCSADCSSKYEVELALSCGFPLNRITYNSPAPDRQLMVDLLDGG 119 Query: 119 IYCFNVESESELKTLNQ-RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 ++ + + + Sbjct: 120 ATVVADSQAILDDLQHKLYGKDWSGSLLVRVNPEKPVEYFHNTDWQDLVSHASPNSKFGI 179 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFK-LLRDLTQQLRSNGHNIQHIDV 236 A + I+G+ +HIG+Q+D + +F + + + + H ++ +++ Sbjct: 180 PSEELPDAPASCQLPIAGLHIHIGTQMDNVSAFSHSIQFIHHLKNLIEACSHHCMRKLNL 239 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 GGGLGI +H + P+ +Y + ++ + I+EPG LV + L+T++ +K+ Sbjct: 240 GGGLGIDFHDGQQFPTIPEYTEALKKHLLPGI-EYIVEPGHALVGNAVALLTRIRELKQM 298 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + + I+DV + ++ TL H+I + A I GP+C GD + + Sbjct: 299 RGRRWAIVDVGSDQLIKVTLLSWSHQIIDRNHRTLPTQGDDA-IGGPLCFAGDILLPSTN 357 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG-SQFHIIRPRMTF 407 + PGD L I+ GAY + +N I ++ Q Sbjct: 358 LEGQSPGDPLLIQHAGAYCYSVNNHFNGFHGPGHITIDEMGQIETAYAAEDV 409 >gi|157117140|ref|XP_001652954.1| ornithine decarboxylase [Aedes aegypti] gi|108876155|gb|EAT40380.1| ornithine decarboxylase [Aedes aegypti] Length = 432 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 76/399 (19%), Positives = 141/399 (35%), Gaps = 30/399 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF+ + + +LT+ YA+K N + +++TLA LG+G D S+ E+R Sbjct: 37 PFHVLDLDDVVQKHLTWLRQMPR--VRPFYAVKCNDDPYILETLACLGTGFDCASKAEIR 94 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + L V +RI+F+ K+ + + A + + +SE EL+ + Q Sbjct: 95 KVLNLGVEPDRIIFAHPVKSNEALLFAKEKRVTKMTFDSELELEKIAQFYP--------- 145 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + + G+ + GV H+G + Sbjct: 146 -EAELVLRFRHDSATVLISLGKKFGCNAQEEGPELIRKAKKLGLNVVGVSFHVGCGSKDV 204 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + ++ A K + L S G+ + +D+GGG + +L + Sbjct: 205 DCYYDAIKSAKSLFDFASSVGYKFKLLDIGGGFPGDSDKKIDGYAEVINQALDKFFPTQS 264 Query: 268 QCKIILEPGRFLVADVGILVTKVIS----------IKKSADKTFVILDVAMNDFMRPTLY 317 ++I EPGR+ V L T + + + + Sbjct: 265 GIEVIAEPGRYYVGSAVRLFTTIHGKKFVKTDDGENHVMYYINDGVFGTLFDWVSLRAVQ 324 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 D I I + D+ + I GP C++ D + + + G+ + E GAYG Sbjct: 325 DLARVIPSITSDKHDKPLLKTTIWGPTCDSTDIVCEDVEFPEHDIGEYMLFENIGAYGIT 384 Query: 378 QSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + ++N + T+ L L I Sbjct: 385 FATSFNGFPSP--------TIRVYVKEQTWSALTNLKCI 415 >gi|307635049|gb|ADI85295.2| carboxynorspermidine/carboxyspermidine decarboxylase [Geobacter sulfurreducens KN400] Length = 384 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 63/398 (15%), Positives = 125/398 (31%), Gaps = 23/398 (5%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + ++K+ + +P Y + N + ALKA + +V + Sbjct: 3 GIDIDKILKLAPSPAYVVDLGRLRHNLAILDQVQRRSGAKILMALKAFAMWSVFPIIRET 62 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+ S E R E F+ K D ++L S FN ++ E Sbjct: 63 LHGVCASSPWEARLGREEFGR-EVHSFAAAFKESDVVELLQTSNHLVFNSFNQLERFRP- 120 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + RVNP+ + + GIP + + G+ Sbjct: 121 -LWEKERGRVSVGLRVNPEHSEGHTPIYDPCAPASRLGIP--RREFDGRSLEGVEGLHFH 177 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + + + ++ H ++ +++GGG +H Sbjct: 178 TLCEQLF---------EPLARTAKVFEEKFGPFLHGMKWLNLGGG----HHITREGYDID 224 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 LI + ++ LEPG + GILV +V+ + ++ + + P Sbjct: 225 ALVELITYFKRKYGVEVYLEPGEAIAIGTGILVGEVLDVVH--NEMDIAILDVSATCHMP 282 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + + GP C GD I +PGD L E Y Sbjct: 283 DVLEMPYRPGITAGFDPGEKAHTYRLAGPSCLAGDVIGDWSFDKPLKPGDRLVFEDMSHY 342 Query: 375 GAVQSGTYNSRLLIPEIMV--NGSQFHIIRPRMTFQEL 410 V++ T+N + ++R +++ Sbjct: 343 TMVKTTTFNGIQHPAICTFEPETGELRVVRK-FGYEDF 379 >gi|315506498|ref|YP_004085385.1| orn/dap/arg decarboxylase 2 [Micromonospora sp. L5] gi|315413117|gb|ADU11234.1| Orn/DAP/Arg decarboxylase 2 [Micromonospora sp. L5] Length = 415 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 91/386 (23%), Positives = 161/386 (41%), Gaps = 14/386 (3%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP Y Y + ++ T A + + Y+LKAN + A++ L G +I S G Sbjct: 6 FDTPAYRYDLARVRASHATLVAALP-APSRLFYSLKANPHPALVAALHTAGCDAEICSPG 64 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 EL AL A VP +R++++G GK E+ A++ G+ F+V+S + L ++ A + G + Sbjct: 65 ELAAALRAGVPGDRMLYTGPGKRDAEVTEAVRGGVRWFSVDSPAGLDQADRIAAAHGVEV 124 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 RVN + TG +FG + I + P + G ++ GS + Sbjct: 125 HCLLRVNDRVPNPGQGLTMTGVAS-QFGADVDWIEQEPQRFRSRPSAPVRGFHLYTGSNV 183 Query: 205 DQIES-FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH-- 261 D +++ + R + G ++ +D+GGG G + + + A + Sbjct: 184 DSVDALVAQFTAAARTARRLRDLLGIDLTLLDLGGGFGAPFARPGQNADLTGLADRVATA 243 Query: 262 -----QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP-- 314 + + ++ E GRFL A G L+T+V+ K+S V+L+ +N Sbjct: 244 LDDLFPAWRDGTPEVAFESGRFLTATAGTLLTRVLDFKRSQGTPVVVLESGINHLGGMSG 303 Query: 315 -TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + + A + GP+C D A + RPGD+L + GA Sbjct: 304 LRRLPPLVPALHAADGRDGAPLEAAIVAGPLCTPLDTWARAANLPDVRPGDVLAVPNVGA 363 Query: 374 YGAVQS-GTYNSRLLIPEIMVNGSQF 398 YG S + E++ +G + Sbjct: 364 YGLSASLLAFLGHPAPVEVVCDGDRV 389 >gi|260905831|ref|ZP_05914153.1| diaminopimelate decarboxylase [Brevibacterium linens BL2] Length = 497 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 97/406 (23%), Positives = 161/406 (39%), Gaps = 20/406 (4%) Query: 26 QTPFY-CYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 TP I + Y ++AF G D + A KA Q ++++ A G+G ++ S Sbjct: 74 GTPVIGLIDLDHIAETYALLTSAFSGAADVLHAVACKAVPLQPLLRSYAEAGAGCEVASP 133 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GEL AL+A E IVF KT E+ A+ G+ +++ EL+ L+ Sbjct: 134 GELELALSAGFSPEAIVFDSPAKTWTELRRAVDLGVSMN-IDNFDELERLDVLLTGHTTS 192 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDMHIGS 202 A + R+NP T +ST + KFGI + + L ++ + +H GS Sbjct: 193 ARVGIRINPQSGTGTIGALSTATQTSKFGIGLADPGARDELIEAYLSRPWLNQIHVHSGS 252 Query: 203 QIDQIESFH-------KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 Q ++ K + +L Q I ID+GGGL + + + P+ ++ Sbjct: 253 QGISLDQAAAGIETVVDLAKEVNELAAQKHGRDRQITRIDIGGGLPVNFSGEEITPTFAE 312 Query: 256 Y-ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 Y A L + ++ E GR L+A G +T V K + + + + R Sbjct: 313 YRAVLEARVPELFDFDLVTEFGRALLAKAGTTLTHVEYAKTTGGRRIAMTHAGVQVATRT 372 Query: 315 TLYDAYHE----INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 A + D+ GP C GD + +R + GD++ + Sbjct: 373 AYAPADWPLRILPFTPEGNPKTAEVVPTDVAGPACFAGDLLVRDRMLPRLDAGDIVAVPD 432 Query: 371 TGAYGAVQSGTYNSRLLIPE----IMVNGSQFHIIRPRMTFQELIE 412 TGAY +YN +P + +F IIR T E++ Sbjct: 433 TGAYYFSNPFSYNLLPRVPVYGYRVQAETVEFSIIRRGQTTAEVLA 478 >gi|300175269|emb|CBK20580.2| Diaminopimelate decarboxylase [Blastocystis hominis] Length = 436 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 91/409 (22%), Positives = 150/409 (36%), Gaps = 20/409 (4%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 ++ + + + +N AF YA+KAN + +I+ + G G++ Sbjct: 23 ISEEHPCGLFI-DSGVLLENMNEIKEAFPEPFFKHRYAIKANPIKKLIRFIGEHGFGVEC 81 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S EL AL + +PA IV+ K ++ + GI+ + N Sbjct: 82 ASFEELSIALESGIPASEIVYDFPLKRKHDLQFCFEHGIHINFDNLQEMEMGYNLYRSLE 141 Query: 141 GK----KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + I R+N + ST KFG+PI +++G+ Sbjct: 142 SEGKVLRGSIGVRINSQYGVGAIEATSTAAPTSKFGVPIKDTDYNELLGLFAKWPEVNGL 201 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH--NIQHIDVGGGLGIAYHSDHRPPSSS 254 H+GSQ + S K + DL +L + H I +D+GGGL + Y SD Sbjct: 202 HSHVGSQGIDLSSMVNGVKFILDLADRLNRDLHRKQITVLDIGGGLPVDYKSDCSNHMPL 261 Query: 255 DYASLIH---QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 YA + + + +I E GR++VA G V++V K + I N F Sbjct: 262 HYAEQLRAKVPRLFSGEFTVITENGRWVVATSGWFVSRVEYTKIAGGVLVGITHAGGNMF 321 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLY 367 +R + V A I GP+C +GD IA + GD + Sbjct: 322 VREVYMPSTWSHPISVYDRDGGKKRDNVRTASIAGPLCFSGDLIAKEVPLPAFEQGDFVV 381 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMV----NGSQFHI--IRPRMTFQEL 410 T AY YN P M + + + I+ + E+ Sbjct: 382 YHHTAAYSISMYSIYNCISAPPAFMYSVKADNGEVDVCCIKRKRNVSEV 430 >gi|156550618|ref|XP_001604448.1| PREDICTED: similar to ENSANGP00000020224 [Nasonia vitripennis] Length = 423 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 76/391 (19%), Positives = 142/391 (36%), Gaps = 27/391 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + + I + + + + YA+K N N +IK LA LG D S+GE+ + Sbjct: 35 VHLLNVGEIIRKHQLWIQKIPR--VVPYYAVKCNPNPTIIKVLAALGGHFDCASKGEIVQ 92 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP+++I+F+ K ++ A + G+ +SE ELK + + I Sbjct: 93 VMQYEVPSDKIIFANPIKFPSHLEYARKVGVDTMTADSEEELKKIRKLYPDAKVVIRIRC 152 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +T K T +DKFG + G+++ G H GS + Sbjct: 153 D-------STVKTARTHCLDDKFGCDHSSDAVQLIKMTLDLGLQLHGFSFHAGSPCEDAV 205 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + + +DL ++ G + GG ++ + + ++ Sbjct: 206 AICRGIYRCKDLIDTAKTMGCRDVKLIDIGGGFPGERDFILDEVTNMVNNALEDIDSSV- 264 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL--------DVAMNDFMRPTLYDAY 320 +II EPGRF+VA VI K + + N+ + Y Sbjct: 265 -EIISEPGRFIVASACNSAAYVIGKKTVMKENQKTFMYYITDGVYGSFNEELCTNNYFRS 323 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 ++ + + D + + GP C++ D + N + GD L GAY + Sbjct: 324 PVSSFRNSTSTDDEKYPSSVWGPTCDSFDVVLKNSMLPEFNVGDWLVWADIGAYSTSCAN 383 Query: 381 TYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 +N + + H I R + + + Sbjct: 384 EFNGLQIP--------KVHPIMRRKDWLDFL 406 >gi|313220937|emb|CBY31771.1| unnamed protein product [Oikopleura dioica] Length = 435 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 96/397 (24%), Positives = 160/397 (40%), Gaps = 12/397 (3%) Query: 27 TPFY-CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 +P Y + + +A + +A+K N + V+ + G G + S GE Sbjct: 32 SPVLDLYDLEGLRGRFKEVQDALPSWNH--AFAIKTNPIRGVMLEAKNCGLGAEAASIGE 89 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE-SESELKTLNQRAVSLGKKA 144 L AL +IV+ KT + AL +G+ E E +++ Sbjct: 90 LEHALQLGFDRSKIVYDSPVKTKAHLKHALNAGVVINLDNLEEIEKVNQLLPDLNVDVTG 149 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I RVNP++ A ST K KFG+P+ L I G+ HIGSQ Sbjct: 150 KIGMRVNPNVGAGKIAMSSTAGKSSKFGLPMTGEFEDEVVKIILENSWIQGLHQHIGSQG 209 Query: 205 DQIESFHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ + L L +++ I++IDVGGG+ Y SD+ + ++YA L+++ Sbjct: 210 ISLDQLTLGVERLVALARKINELAGTKQIKYIDVGGGIPTDYESDNEKVAYAEYAKLVNE 269 Query: 263 YFGN-LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 N + E GR LV I V+KV ++K D+ V+ N F+R Sbjct: 270 RVPNLDEFNFHSEFGRSLVTKYAISVSKVETVKTWGDRITVLTHFGSNQFLREVYLPDTW 329 Query: 322 EINYIVNPAGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 V + D+ GP+C GD++A R + +PGD + + G Y Sbjct: 330 FHRMSVLDQNGDPKVSDLIEQDVGGPLCFQGDYLAKARALPEIKPGDYIVMHDIGGYTYA 389 Query: 378 QSGTYNSRLLIPEIMVNGSQ-FHIIRPRMTFQELIEL 413 +NS + S+ F+ ++ R + E + Sbjct: 390 LYSRFNSIQAPAVYGYDASENFYELKSRESLAETLSF 426 >gi|85374200|ref|YP_458262.1| ornithine/diaminopimelate/arginine decarboxylase,family protein [Erythrobacter litoralis HTCC2594] gi|84787283|gb|ABC63465.1| ornithine/diaminopimelate/arginine decarboxylase,family 2 [Erythrobacter litoralis HTCC2594] Length = 420 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 96/402 (23%), Positives = 162/402 (40%), Gaps = 14/402 (3%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 F+ +G L + +L TP + YS I A + YA+KA Sbjct: 22 NFEAQDGELAIGGKTATQLVEEAGGTPLFVYSRDIIAGTMRHLREAMPE-RLHINYAIKA 80 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NS+ V+ +A L G DI S GEL + AA + R+ F+G GK E++ A+++G+ Sbjct: 81 NSHPEVLAFMADLVEGYDIASGGELEKIQAAGIDTRRVSFAGPGKRDRELEAAIEAGVT- 139 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 N+ESE E + + A LG+ +A RVNPD + G + FGI ++ +L Sbjct: 140 LNLESEGEARRALEIAERLGQTPRLAIRVNPDFDMKGSGMKMGGGAK-PFGIDAERVPAL 198 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 + G + +L + G + +++GGG G Sbjct: 199 GSEIIAAGGEWRGLHIYTGSQALSAEAIIETQANVLALADKIASEMGEALPKLNMGGGFG 258 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQC-----KIILEPGRFLVADVGILVTKVISIKKS 296 I Y P S + + FG+L + +E GR+LV G+ + +++ K S Sbjct: 259 IPYFHGDEPLDIEAIGSALEERFGDLPETLADAHLCIELGRYLVGLAGVYLCRIVDRKVS 318 Query: 297 ADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 +TF++ D ++ + I +VG +C D ++ Sbjct: 319 HGETFLVTDGGLHHQLAASGNFGTVVRRNYPAAIATRFDAPPVEVQHVVGCLCTPLDRLS 378 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 + GD++ I GAYGA S + + E++V Sbjct: 379 DKAFLPRADVGDIVAIFCAGAYGASASPAEFLGQGPAREVLV 420 >gi|195150603|ref|XP_002016240.1| GL11482 [Drosophila persimilis] gi|194110087|gb|EDW32130.1| GL11482 [Drosophila persimilis] Length = 395 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 81/395 (20%), Positives = 167/395 (42%), Gaps = 23/395 (5%) Query: 3 AFKYFEGSLHAENVSLEKLA--HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 Y+E L+ V +E+ A V +++E+ Y + + YA+K Sbjct: 7 EITYYEHELNIRRV-IEEQASLQNVDAALNICDLSSVERKYNLWVKYLPRITP--YYAVK 63 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 N + ++K LA LG+G D S+ E++ L V ERI+F+ + + ++ A Q + Sbjct: 64 CNDDPMIVKVLAELGAGFDCASKNEVKLVLGLDVAPERIIFANPCRPVSHLEYAQQHRVA 123 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 V++E E+ L++ + N + + K + DKFG + Sbjct: 124 NGTVDNEFEIYKLHKHYP----------QSNLIVRFKSEAKEAQCPLGDKFGCDADADAT 173 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + +K++G H+GS ++E++ +A K +++ + G+++ +D+GGG Sbjct: 174 ALMLLAKALDLKVTGTSFHVGSGCSELEAYDRAIKKAKNIFKFGELLGYDMNFLDIGGGF 233 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK- 299 + + + + + ++F + + +II EPGRF VA LV K+ + ++ ++ Sbjct: 234 PGSDDGKFQKIAEI-VNTSVQRHFPDDRVQIIAEPGRFFVAAAYTLVCKIHAKREVRNEA 292 Query: 300 ------TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + D F + ++ + + I GP C+ D I+ Sbjct: 293 GKLDTIMYYLNDGVYGSFNCILYDHQVVTPEHYLDESAAFPEFKSLIWGPSCDALDKISE 352 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + ++ GDL+ GAY + +N + Sbjct: 353 DLRLPNLNRGDLIGFPNMGAYTVPIASPFNGFEVP 387 >gi|49475973|ref|YP_034014.1| ornithine decarboxylase [Bartonella henselae str. Houston-1] gi|49238781|emb|CAF28047.1| Ornithine decarboxylase [Bartonella henselae str. Houston-1] Length = 377 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 150/373 (40%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P I +NYL F A + YA+KAN ++ LA LGS D S E+ Sbjct: 18 PCLIVDLDIIRENYLNFEKALPQS--RIFYAIKANPAPEILNLLASLGSSFDAASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A ++RI F K +I A GI + V+ E++ + + A + + Sbjct: 76 MALKAGATSDRISFGNTIKKERDIAQAYALGISLYAVDCVEEVEKIARAAPGVRVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T K + KFG + A L ++ GV H+GSQ + Sbjct: 136 ----------TDGKGAEWPLSRKFGCVPAMAVDVLRRAHQLG-LQAYGVSFHVGSQQTDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 ++ +A + + L G +++ +++GGG Y D + + +YFG Sbjct: 185 SAWDRALSDAATVFRHLEHEGISLKLVNMGGGFPTRYLKDVPTTQAYGTVVFDSLKKYFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ T+V+ I K AD + I Y Sbjct: 245 NRIPETIIEPGRGMVGNAGVIRTEVVLISKKADNDNIRWVYLDVGKFNGLTETMDEAIRY 304 Query: 326 IVN-PAGDRLHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 + P D+ + GP C++ D + + L GD L I TGAY A + Sbjct: 305 PIETPHDDKAMEPCILAGPTCDSADVLYEKTPYLLPLSLTVGDELLIHGTGAYTATYASV 364 Query: 382 -YNSRLLIPEIMV 393 +N +P ++ Sbjct: 365 AFNGFEPLPSYVI 377 >gi|225679753|gb|EEH18037.1| ornithine decarboxylase [Paracoccidioides brasiliensis Pb03] gi|226291506|gb|EEH46934.1| ornithine decarboxylase [Paracoccidioides brasiliensis Pb18] Length = 448 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 83/373 (22%), Positives = 138/373 (36%), Gaps = 33/373 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N + +++ + LG+G D S+ E+ Sbjct: 69 PFYVADLGQVYRQHIRWKKNLGRVKP--FYAVKCNPDPQILRLMVQLGNGFDCASKAEID 126 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL V RI+++ KT + A Q G+ ++ EL + + I Sbjct: 127 YALDVGVDPSRIIYAQPCKTKSFLRYASQVGVKQMTFDNSDELYKIKEMCPDAELYLRIL 186 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + SL A L + + GV H+GS + Sbjct: 187 ----------TDDSASLCRLSMKFGASLSVARSLLELAKEL-KLNVIGVSFHVGSGAEDP 235 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +SF KA + R + Q G +++ +DVGGG S + Sbjct: 236 KSFVKAVEDSRFVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLSDAL-----DEYFPP 290 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKS-------------ADKTFVILDVAMNDFMRP 314 +II EPGR+ VA L VI+ + + + L+ + Sbjct: 291 HIRIIAEPGRYYVASAFTLAANVIARRDVSLEMSDSDSTAGATEAYMIYLNDGVYGNFSN 350 Query: 315 TLYDAYHEINYIVNPAGD-RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 ++D H + I+ I I GP C+ D I + G+ LY E G Sbjct: 351 IIFDHQHPVPQILTMESRVCAPIEYSIWGPTCDGIDLICERIALPGALDVGNWLYFENMG 410 Query: 373 AYGAVQSGTYNSR 385 AY + +N Sbjct: 411 AYTKCSATRFNGF 423 >gi|125808167|ref|XP_001360660.1| GA21280 [Drosophila pseudoobscura pseudoobscura] gi|54635832|gb|EAL25235.1| GA21280 [Drosophila pseudoobscura pseudoobscura] Length = 395 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 81/395 (20%), Positives = 167/395 (42%), Gaps = 23/395 (5%) Query: 3 AFKYFEGSLHAENVSLEKLA--HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 Y+E L+ V +E+ A V +++E+ Y + + YA+K Sbjct: 7 EITYYEHELNIRRV-IEEQASLQNVDAALNICDLSSVERKYNLWVKYLPRITP--YYAVK 63 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 N + ++K LA LG+G D S+ E++ L V ERI+F+ + + ++ A Q + Sbjct: 64 CNDDPMIVKVLAELGAGFDCASKNEVKLVLGLDVAPERIIFANPCRPVSHLEYAQQHRVA 123 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 V++E E+ L++ + N + + K + DKFG + Sbjct: 124 NGTVDNEFEIYKLHKHYP----------QSNLIVRFKSEAKEAQCPLGDKFGCDADADAT 173 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + +K++G H+GS ++E++ +A K +++ + G+++ +D+GGG Sbjct: 174 ALMLLAKALDLKVTGTSFHVGSGCSELEAYDRAIKKAKNIFKFGELLGYDMNFLDIGGGF 233 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK- 299 + + + + + ++F + + +II EPGRF VA LV K+ + ++ ++ Sbjct: 234 PGSDDGKFQKIAEI-VNTSVQRHFPDDRVQIIAEPGRFFVAAAYTLVCKIHAKREVRNEA 292 Query: 300 ------TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + + D F + ++ + + I GP C+ D I+ Sbjct: 293 GKLDTIMYYLNDGVYGSFNCILYDHQVVTPEHYLDESEAFPEFKSLIWGPSCDALDKISE 352 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + ++ GDL+ GAY + +N + Sbjct: 353 DLRLPNLNRGDLIGFPNMGAYTVPIASPFNGFEVP 387 >gi|12007488|gb|AAG45222.1|AF323910_1 ornithine decarboxylase [Nicotiana glutinosa] Length = 432 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 68/366 (18%), Positives = 124/366 (33%), Gaps = 21/366 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + YA+K N + + L+ +GS D S E+ Sbjct: 65 PFYVLDLGEVVSLMDQWKSSLP--NIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 122 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 LA + +RIVF+ K +I A + G+ +SE E+ + + I Sbjct: 123 YVLALGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSELLPRI- 181 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + + + A+ + +SGV HIGS Sbjct: 182 ---------KPMFDGNARCPMGPKYGALPEEVEPLLRAAQAARLTVSGVSFHIGSGDADS 232 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ A +++ + G + + GG + H + A H + Sbjct: 233 NAYLGAIAAAKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQH-FDDEP 291 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + II EPGRF L T VI + + ++ + M LYD + Sbjct: 292 ELTIIAEPGRFFAETAFTLATTVIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPL 351 Query: 328 NPAGDRLHIHA--------DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +R ++ + GP C+ D + + ++ + D L GAY Sbjct: 352 AVLSNRTNVTCGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAG 411 Query: 380 GTYNSR 385 +N Sbjct: 412 SNFNGF 417 >gi|269964974|ref|ZP_06179139.1| putative diaminopimelate decarboxylase protein [Vibrio alginolyticus 40B] gi|269830277|gb|EEZ84502.1| putative diaminopimelate decarboxylase protein [Vibrio alginolyticus 40B] Length = 400 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 87/368 (23%), Positives = 153/368 (41%), Gaps = 13/368 (3%) Query: 18 LEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + LA P Y Y +A+E++ + + + YA KAN + ++KTLA Sbjct: 15 VHTLAQQQSQPLCAYVYDLSALEEHIKQLRHILPR-NVELFYAAKANPSGPILKTLAPYV 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S GEL + + ++F G GK + E+ A++ + +VES +EL+ + Sbjct: 74 DGFEAASGGELTHLHQQQLD-KPLIFGGPGKMLSELQQAIELDVDAIHVESLTELQRIGA 132 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 L + A I R+N DI T K++ G K FG+ ++ + P V + G Sbjct: 133 LTERLNRPASIFLRMNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKG 192 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI-DVGGGLGIAYHSDHRPPSSS 254 H+ S +E + + + + + + ++GGG+GI Y + + Sbjct: 193 FHFHLMSHQLDVERHLALMQRYFQVVKAWQQEFELGELMINLGGGMGINYQNPEQHFPWM 252 Query: 255 DYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ + + E GRF+ A G V +V+ IK++ + FVI + F Sbjct: 253 EFCDKLEFLIAKEQVQHWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHF 312 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIH-----ADIVGPICETGDFIALNRKIALPRPGDLL 366 P + H + N + A VG +C D +A N+ +A GD + Sbjct: 313 RTPAAQNHDHPFVILKNEQHHEISHPIQHAQATFVGQLCTPKDVLARNQHVAHVDIGDYV 372 Query: 367 YIEKTGAY 374 GAY Sbjct: 373 VFTLAGAY 380 >gi|222054774|ref|YP_002537136.1| carboxynorspermidine decarboxylase [Geobacter sp. FRC-32] gi|221564063|gb|ACM20035.1| carboxynorspermidine decarboxylase [Geobacter sp. FRC-32] Length = 384 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 63/397 (15%), Positives = 124/397 (31%), Gaps = 21/397 (5%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + ++K+ + +P Y + N + + ALKA S +V + Sbjct: 3 GIDIDKILKLAPSPAYVVDLGRLRHNLAILDDVQKRSGAKILLALKAFSMWSVFPIIRET 62 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+ S E R E F+ K D ++L S FN ++ E Sbjct: 63 LYGVCASSPWEARLGRE-EFDREVHSFAAAFKERDVVELLPLSNHLVFNSFNQLERFRP- 120 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + RVNP+ + + GIP + + G+ Sbjct: 121 -LWEKERGRVSVGLRVNPEHSEGHTAIYDPCAVNSRLGIP--RREFEGRSLEGVEGLHFH 177 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + + ++ ++ S ++ +++GGG +H Sbjct: 178 TLCEQLF---------EPLERTVKVFDEKFGSFMPGMKWLNLGGG----HHITREGYDID 224 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 L+ ++ LEPG + GILV +V+ + K+ + + P Sbjct: 225 GLVELVKHLKAKYDVEVYLEPGEAIAIGTGILVGEVMDVVKNG--MDIAILDVSATCHMP 282 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + + GP C GD I +PGD L E Y Sbjct: 283 DVLEMPYRPGITGGFDPGVKEHTYRLGGPSCLAGDVIGDWSFEKPLQPGDRLAFEDMSHY 342 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHI-IRPRMTFQEL 410 V++ T+N + + + + + Sbjct: 343 TMVKTTTFNGIQHPAICTYEPETEELKVVRQFDYSDF 379 >gi|67526777|ref|XP_661450.1| hypothetical protein AN3846.2 [Aspergillus nidulans FGSC A4] gi|40739921|gb|EAA59111.1| hypothetical protein AN3846.2 [Aspergillus nidulans FGSC A4] Length = 450 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 86/371 (23%), Positives = 139/371 (37%), Gaps = 30/371 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + +L + + A+K N + V++ +A LG+G D S+ E+ Sbjct: 75 FYVADMGEVYRQHLRWKMNLSRVRPFYELAVKCNPDPEVLRLMAKLGNGFDCASKAEIDM 134 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 AL+ V RI+++ KT + A + G+ ++ EL + I Sbjct: 135 ALSTGVDPSRIIYAQPCKTKSYLRHAAKVGVKQMTFDNADELYKIKACYPEAELYLRIL- 193 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L +KI GV H+GS + + Sbjct: 194 ---------TDDSNSLCQFSMKFGASLDVARQLLELAHQLE-LKIVGVSFHVGSGAEDPK 243 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q GH + +DVGGG S + + Sbjct: 244 AFLKAVQDARLVFDQAAEIGHELHTLDVGGGFTGETFEKFAAVLDSAL-----ETYFPPN 298 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM-------NDFMRPTLYDAYH 321 +II EPGR+ V L +I+ + D D M ++D H Sbjct: 299 IRIIAEPGRYYVGGAFTLAANIIARRGVQDPENPSKDAYMIYLNDGVYGNFSNIIFDHQH 358 Query: 322 EINYIVNPAGD------RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAY 374 I++ A + + I GP C+ D I+ + L GD LY E+ GAY Sbjct: 359 PEARILSCASEINGRPVSEDVTYSIWGPTCDGIDVISQRSVLPGLLDVGDWLYFEEMGAY 418 Query: 375 GAVQSGTYNSR 385 + +N Sbjct: 419 TRCSATRFNGF 429 >gi|302186112|ref|ZP_07262785.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae 642] Length = 402 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 93/396 (23%), Positives = 160/396 (40%), Gaps = 20/396 (5%) Query: 22 AHVVQT-PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 A ++T P + Y A+ ++ A + YA+KANS +++TLA L SG Sbjct: 15 ARALETDPLAAFIYDLDALRQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGF 73 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 +I S GE+ R A + VFSG GK ++ AL + + ++ES +E+ L Q A Sbjct: 74 EISSGGEIERV-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAE 132 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 G+ P+ R+NP + A +++ FGI ++ + + G + Sbjct: 133 QAGRVQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEAELAEAVRRVDNASHLTLKGFHV 192 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLR---SNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 H S +E + Q+ + + + H +VGGG+G+ Y + + Sbjct: 193 HAMSHQMSVERHEQLLDFYLQRWQEWKALARDPGQLTHFNVGGGIGVDYL-NSQQFDWQR 251 Query: 256 YASLIHQYFGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + G I EPGRF+ A G +V+ K S + F+I + F Sbjct: 252 LCRYLEKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLICRGGTHQFRL 311 Query: 314 PTLYDAYHEINYIVNPAGDRL--HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 P H + ++ N + IVG +C D ++ + + GDLL + Sbjct: 312 PVAQSHDHPVIHLPNTPQNAASSEQAYTIVGQLCTPKDVLSRRQPLKDVNIGDLLVLPLA 371 Query: 372 GAYGA--VQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 GAYG + + + V + R R Sbjct: 372 GAYGYNISHA-DFLCHPRPSQHFVRNGE----RVRQ 402 >gi|255936309|ref|XP_002559181.1| Pc13g07510 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583801|emb|CAP91820.1| Pc13g07510 [Penicillium chrysogenum Wisconsin 54-1255] Length = 448 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 85/375 (22%), Positives = 140/375 (37%), Gaps = 36/375 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + ++ + + YA+K N + V++ +A LG+G D S+ E+ Sbjct: 71 FYVADMGEVYRQHMRWKMNLGRVKP--FYAVKCNPDPEVLRLMAQLGNGFDCASKSEIDM 128 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 AL + RI+++ KT + A + G+ ++ EL + I Sbjct: 129 ALQTGIDPSRIIYAQPCKTKSYLRYASEVGVKQMTFDNADELYKIKATFPEAELYLRIL- 187 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + Q L A L +K+ GV H+GS + Sbjct: 188 ---------TDDSTSLCRLSMKFGASMDQARMLLELAYKLE-LKVVGVSFHVGSGAEDPR 237 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q GH + +DVGGG + Sbjct: 238 AFLKAVQDARMVFDQAAEIGHELHTLDVGGGFCQDTFEKFAGILGEAV-----DTYFPPN 292 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT-------FVILDVAMNDFMRPTLYDAYH 321 ++I EPGR+ VA L VI+ + D + L+ + ++D H Sbjct: 293 IRVIAEPGRYYVATAYTLAANVIARRDIPDPDDPSRDAFMLYLNDGVYGNFSNIIFDHQH 352 Query: 322 EINYIVNPAGDRLH----------IHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEK 370 + ++ A D I I GP C+ D I+ + L GD LY E+ Sbjct: 353 PVAQVLTCAADSPPGSPNSATSEDITYSIWGPTCDGIDVISERIALPGLLNTGDWLYFEE 412 Query: 371 TGAYGAVQSGTYNSR 385 GAY + +N Sbjct: 413 MGAYTKCSATRFNGF 427 >gi|271501109|ref|YP_003334134.1| diaminopimelate decarboxylase [Dickeya dadantii Ech586] gi|270344664|gb|ACZ77429.1| Diaminopimelate decarboxylase [Dickeya dadantii Ech586] Length = 417 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 86/386 (22%), Positives = 150/386 (38%), Gaps = 13/386 (3%) Query: 20 KLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 +L + P + Y A+ ++ A + YA+KANS + ++ +A L G Sbjct: 14 RLQQQHRDPLAAFVYDLAALRQHVSEVMAALP-PGVELYYAIKANSEKPILDAIAPLVHG 72 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +I S GE+ R A+ VFSG GK + DLAL+ G+ +VES E+ L QRA Sbjct: 73 FEISSGGEIDRVAGCAT-AKPFVFSGPGKLDSDFDLALEHGVEAVHVESRHEIARLQQRA 131 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G P+ R+NP++ ++ K++ FG+ + +++ G Sbjct: 132 QQHGVVQPVFIRINPELASSLTSKLAMAGTPTPFGMDEADLPDAVRDVDNASHLQLKGFH 191 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID--VGGGLGIAYHSDHRPPSSSD 255 +H S +E + L Q ++ + Q I GG + S Sbjct: 192 VHAMSHQMSVERHQQLLDLYLTRWPQWKALSAHPQQITHLNVGGGIGVPYLTPERFDWSA 251 Query: 256 YASLIHQYFGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + EPGRF+ A G +V+ K+S K F++ + F Sbjct: 252 LCDYLRVRLAQQPDVPVVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVCRGGTHQFRL 311 Query: 314 PTLYDAYHEINYI--VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 P H I ++ +VG +C D ++ ++++ GDLL + Sbjct: 312 PVAQGHDHPIIHLPLAPAQPAGETRDWTVVGQLCTPKDVLSRDQRLTDVNIGDLLVLPLA 371 Query: 372 GAYGA--VQSGTYNSRLLIPEIMVNG 395 GAYG + + + + Sbjct: 372 GAYGYNISHA-DFLCHPRPAQYFITD 396 >gi|183178880|gb|ACC43928.1| ornithine decarboxylase [Malus hupehensis] Length = 425 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 112/370 (30%), Gaps = 18/370 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + ++ + + +A+K N A I LA LG+ D S+ E+ Sbjct: 56 PFYVLDLGVLVSLMQKWNRCLP--NVLPFFAVKCNPEPAFIAALATLGASFDCASKVEIE 113 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ V RIV++ K + + A G+ +S EL + I Sbjct: 114 AILSHGVSPSRIVYANPCKGENHLRHAAGVGVNLATFDSMDELNKIKGCHPKCSLLLRI- 172 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 A + S KFG+ ++ L +A L + + Sbjct: 173 --------AVPNDTSSWRSFGTKFGVLSEEVAPLLRHAHKLGLRVVGVSFHVGSKASESQ 224 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY-HSDHRPPSSSDYASLIHQYFGN 266 + +D+GGG + + + + Sbjct: 225 VYRGAIAAARAAFDVADELKLPKVHVLDIGGGFKVNPLFDEIAETLNDAIKEHFGDHQSE 284 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN-- 324 ++ EPGRF LV V+ + +K + + +D Sbjct: 285 SDLVVMAEPGRFFAETPFTLVANVMGKRVRGEKREYWITDGIYGSFNLPAFDKSCLTVSP 344 Query: 325 ----YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + + + GP C++ D + + K+ + D L GAY + Sbjct: 345 LLLHTPDHHHHSVAIYSSTVFGPTCDSLDTVVADYKLPELKLNDYLVFHNMGAYTSSAGT 404 Query: 381 TYNSRLLIPE 390 +N + Sbjct: 405 NFNGFCISAI 414 >gi|310816188|ref|YP_003964152.1| decarboxylase, pyridoxal-dependent [Ketogulonicigenium vulgare Y25] gi|308754923|gb|ADO42852.1| decarboxylase, pyridoxal-dependent [Ketogulonicigenium vulgare Y25] Length = 395 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 82/377 (21%), Positives = 144/377 (38%), Gaps = 19/377 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 P +E+ Y D + YA+KAN ++ V++ L HLGS D S Sbjct: 32 ADFDKPTLVLDIDRVEEQYRALKAGLGHAD--IHYAVKANPHRDVLERLVHLGSHFDCAS 89 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GE+ LA E I + K +I A G+ F V++E EL + + A Sbjct: 90 RGEIEMCLALGARPETISYGNTIKRARDIAFAASVGVTLFAVDAEEELVKIAENAPGAQV 149 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + KFG +L A L ++ G H+GS Sbjct: 150 YVRLIVEASQA----------DWPLSRKFGCDGEMALNLLDRAVELG-LEPLGFSFHVGS 198 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIH 261 Q + + + A + + R+ GHN+ +++GGG Y + + P+ + Sbjct: 199 QTRRADFWIPALDAFAGIWDEARARGHNLSLLNIGGGFPAFYGEEIQGPTRYAASVMELV 258 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 +++ EPGR +VA+ G++V +V+ + +++ Sbjct: 259 TARFGHVERVMAEPGRGMVAEAGMIVAEVVLTSRKSERDMHRWVYLSIGRFSGLAETEGE 318 Query: 322 EINYIVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAV 377 I Y D + + GP C++ D + R + LP + GD + I TGAY + Sbjct: 319 AIRYQFVTPHDGEAMGPCIVAGPSCDSADVLYEKRPMNLPLALKSGDKVLIRNTGAYTST 378 Query: 378 QSGT-YNSRLLIPEIMV 393 S +N + + + Sbjct: 379 YSSVCFNGFPPLDVVAI 395 >gi|1706323|sp|P50134|DCOR_DATST RecName: Full=Ornithine decarboxylase; Short=ODC gi|871008|emb|CAA61121.1| ornithine decarboxylase [Datura stramonium] Length = 431 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 71/372 (19%), Positives = 130/372 (34%), Gaps = 21/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + ++ + YA+K N + + L+ +GS D S E+ Sbjct: 64 PFYVLDLGEVVSLMDQWNAGLP--NIRPFYAVKCNPEPSFLSMLSAMGSNFDCASRAEIE 121 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + +RIVF+ K +I A + G+ +SE E+ + + + Sbjct: 122 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTFDSEDEVYKIRKHHPKCEL--LLR 179 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + D NA K+G ++ L A + +SGV HIGS Sbjct: 180 IKPMDDGNA-------RCPMGPKYGALPEEVEPLLRTAQ-AARLTVSGVSFHIGSGDADS 231 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +++ A + + + G + + GG + H ++ A H + Sbjct: 232 KAYLGAIAAAKGVFETAARFGMSKMTVLDIGGGFTSGHQFTTASAAVRSALEQH-FHDEQ 290 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + II EPGRF L T +I + + ++ + M LYD + Sbjct: 291 ELTIIAEPGRFFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPL 350 Query: 328 NPAGDR--------LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +R + + GP C+ D + + ++ + D L GAY Sbjct: 351 ACMSNRSNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAG 410 Query: 380 GTYNSRLLIPEI 391 +N + Sbjct: 411 SNFNGFNTSAIV 422 >gi|295668118|ref|XP_002794608.1| ornithine decarboxylase [Paracoccidioides brasiliensis Pb01] gi|226286024|gb|EEH41590.1| ornithine decarboxylase [Paracoccidioides brasiliensis Pb01] Length = 448 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 81/373 (21%), Positives = 137/373 (36%), Gaps = 33/373 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N + +++ + LG+G D S+ E+ Sbjct: 69 PFYVADLGQVYRQHIRWKKNLGRVKP--FYAVKCNPDPQILRLMVQLGNGFDCASKAEID 126 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL V RI+++ KT + A Q G+ ++ EL + + I Sbjct: 127 YALDVGVDPSRIIYAQPCKTKSFLRYASQVGVKQMTFDNSDELYKIKEMCPDAELYLRIL 186 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + SL + + + GV H+GS + Sbjct: 187 ----------TDDSASLCRLSMKFGASLSVARSLLEL-AKELKLNVIGVSFHVGSGAEDP 235 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +SF KA + R + Q G +++ +DVGGG S + Sbjct: 236 KSFVKAVEDSRFVFDQAAEVGFDLKVLDVGGGFSEDTFERFASTLSDAL-----DEYFPP 290 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKS-------------ADKTFVILDVAMNDFMRP 314 +II EPGR+ VA L VI+ + + + L+ + Sbjct: 291 HIRIIAEPGRYYVASAFTLAVNVIARRDVSLEMSDSDSTAGATEAYMIYLNDGVYGNFSN 350 Query: 315 TLYDAYHEINYIVNPAGD-RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 ++D H + I+ I I GP C+ D I + G+ LY E G Sbjct: 351 IIFDHQHPVPQILTMESRVCAPIEYSIWGPTCDGIDLICERIALPGALDVGNWLYFENMG 410 Query: 373 AYGAVQSGTYNSR 385 AY + +N Sbjct: 411 AYTKCSATRFNGF 423 >gi|261205964|ref|XP_002627719.1| ornithine decarboxylase [Ajellomyces dermatitidis SLH14081] gi|239592778|gb|EEQ75359.1| ornithine decarboxylase [Ajellomyces dermatitidis SLH14081] gi|239611062|gb|EEQ88049.1| ornithine decarboxylase [Ajellomyces dermatitidis ER-3] gi|327350693|gb|EGE79550.1| ornithine decarboxylase [Ajellomyces dermatitidis ATCC 18188] Length = 450 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 84/373 (22%), Positives = 137/373 (36%), Gaps = 33/373 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N + V++ +A LG+G D S+ E+ Sbjct: 71 PFYVADLGQVYRQHIRWKKNLGRVKP--FYAVKCNPDPQVLRLMAKLGNGFDCASKAEID 128 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL V RI+++ KT + A Q G+ ++ EL + + I Sbjct: 129 LALGVGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPDAELYLRIL 188 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + SL A L + + GV H+GS + Sbjct: 189 ----------TDDSASLCRLSMKFGASLSIARSLLELAKEL-KLNVVGVSFHVGSGAEDP 237 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 SF KA + R + Q G +++ +DVGGG S Sbjct: 238 RSFVKAVEDSRYVFDQAAEAGFDLKVLDVGGGFSEDTFERFAATLSDAL-----DEHFPP 292 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKS-------------ADKTFVILDVAMNDFMRP 314 ++I EPGR+ VA L VI+ + + + L+ + Sbjct: 293 HIRVIAEPGRYYVASAFTLAANVIARRDVSLEMSDSASTDSATEAYMIYLNDGVYGNFSN 352 Query: 315 TLYDAYHEINYIVNPAGD-RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 ++D H + I+ I I GP C+ D I + G+ LY E G Sbjct: 353 IIFDHQHPVPQILTMGSPVCTPIEYSIWGPTCDGIDLITERTTLPGALDVGNWLYFENMG 412 Query: 373 AYGAVQSGTYNSR 385 AY + +N Sbjct: 413 AYTKCSATRFNGF 425 >gi|109475568|ref|XP_232777.4| PREDICTED: similar to ornithine decarboxylase [Rattus norvegicus] gi|109477346|ref|XP_001062262.1| PREDICTED: similar to ornithine decarboxylase [Rattus norvegicus] Length = 425 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 81/368 (22%), Positives = 133/368 (36%), Gaps = 22/368 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF + + TF A + YA+K N+ +++ LA LG+G D S+GEL Sbjct: 51 PFMVADLDVLASRHQTFLQALPRVWP--FYAVKCNNRPSLLLVLAALGTGFDCASQGELE 108 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + L V RI+F+ K + I A + G+ +SE EL L + I Sbjct: 109 QVLGLGVAPSRIIFANPCKAVSHIQYAARCGVQLLTFDSEEELTKLARHHPGARLILRI- 167 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T ST KFG + L A L + G H+GS Sbjct: 168 ---------QTLGGRSTFPLHTKFGARLLACGRLLQVARELGLA-VVGASFHVGSDCHTP 217 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY--ASLIHQYFG 265 +S+ +A + + GH + +D+GGG S+ + + A+L + Sbjct: 218 QSYRQAIADCHRVFEMGCKAGHQMSLLDLGGGFPGIEGSEAKFEEMARVVNAALAQYFPE 277 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIK---KSADKTFVILDVAMNDFMRPTLY---DA 319 ++I EPGRF V +I+ K + + + + ++ Sbjct: 278 GTGVEVIAEPGRFYAESVCTAAVNIIAKKASLEPGGHRKLAYYLNEGHYGAFRIFLRDPV 337 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGD-FIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + D + GP C+ D + ++ GD L GAY + Sbjct: 338 PRIPIVVKELPSDPHLFPCTLYGPTCDAFDRLFSTEVQLPELDVGDWLVFPDMGAYRSTM 397 Query: 379 SGTYNSRL 386 S T+N Sbjct: 398 SSTFNGFP 405 >gi|289774015|ref|ZP_06533393.1| decarboxylase [Streptomyces lividans TK24] gi|289704214|gb|EFD71643.1| decarboxylase [Streptomyces lividans TK24] Length = 457 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 93/398 (23%), Positives = 160/398 (40%), Gaps = 18/398 (4%) Query: 27 TPFY-CYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP + + AF+G +A KA V++ LA G G ++ S G Sbjct: 35 TPLVGLLDVDGVLAAVDALNEAFEGPAPVQHTFAAKACGLVPVLRLLAEAGMGCEVASPG 94 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 EL +ALAA +R+VF KT++E++ AL GI N+++ E+ ++ Sbjct: 95 ELEQALAAGFTYDRLVFDSPAKTVEELEFALAHGIA-INLDNFQEMARVDGLLAGREAAG 153 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG-VKISGVDMHIGSQ 203 PI RVNP + A +ST KFG+ + ++ A ++ + H+GSQ Sbjct: 154 PIGLRVNPQVGAGAIGAMSTATATSKFGVALRDEGAVDAVIEAFARRPWLNRLHAHVGSQ 213 Query: 204 IDQIESFHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + + +L +++ I +D+GGGL + + + P+ +D+ + + Sbjct: 214 GCPLPLIAQGVRTAYELAERINRELGRAQITGLDIGGGLPVNFDGEDDRPTYADHVAELR 273 Query: 262 QYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + +I E GR L+A G + + V K + + + R Sbjct: 274 SAAPGLFDGRYALITEFGRSLLAKSGTIASVVEYTKSAGGRRIAVTHAGAQVATRTVFMP 333 Query: 319 AYHEINYIVNPAGDRLH----IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + V A R DI GP C GD A R++ PGD++ + TGAY Sbjct: 334 DAWPLRVGVFDAAGRPKQGPAEVVDIAGPCCFAGDLTATGRELPAVEPGDVVALYDTGAY 393 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQ-----FHIIRPRMTF 407 +YNS F ++R + Sbjct: 394 YFSSHFSYNSLPRPAVYGYRTDSRGQIAFALVREAQSV 431 >gi|21218863|ref|NP_624642.1| decarboxylase [Streptomyces coelicolor A3(2)] gi|256790137|ref|ZP_05528568.1| decarboxylase [Streptomyces lividans TK24] gi|5881872|emb|CAB55672.1| putative decarboxylase [Streptomyces coelicolor A3(2)] Length = 452 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 93/398 (23%), Positives = 160/398 (40%), Gaps = 18/398 (4%) Query: 27 TPFY-CYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP + + AF+G +A KA V++ LA G G ++ S G Sbjct: 30 TPLVGLLDVDGVLAAVDALNEAFEGPAPVQHTFAAKACGLVPVLRLLAEAGMGCEVASPG 89 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 EL +ALAA +R+VF KT++E++ AL GI N+++ E+ ++ Sbjct: 90 ELEQALAAGFTYDRLVFDSPAKTVEELEFALAHGIA-INLDNFQEMARVDGLLAGREAAG 148 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG-VKISGVDMHIGSQ 203 PI RVNP + A +ST KFG+ + ++ A ++ + H+GSQ Sbjct: 149 PIGLRVNPQVGAGAIGAMSTATATSKFGVALRDEGAVDAVIEAFARRPWLNRLHAHVGSQ 208 Query: 204 IDQIESFHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + + +L +++ I +D+GGGL + + + P+ +D+ + + Sbjct: 209 GCPLPLIAQGVRTAYELAERINRELGRAQITGLDIGGGLPVNFDGEDDRPTYADHVAELR 268 Query: 262 QYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + +I E GR L+A G + + V K + + + R Sbjct: 269 SAAPGLFDGRYALITEFGRSLLAKSGTIASVVEYTKSAGGRRIAVTHAGAQVATRTVFMP 328 Query: 319 AYHEINYIVNPAGDRLH----IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + V A R DI GP C GD A R++ PGD++ + TGAY Sbjct: 329 DAWPLRVGVFDAAGRPKQGPAEVVDIAGPCCFAGDLTATGRELPAVEPGDVVALYDTGAY 388 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQ-----FHIIRPRMTF 407 +YNS F ++R + Sbjct: 389 YFSSHFSYNSLPRPAVYGYRTDSRGQIAFALVREAQSV 426 >gi|301630922|ref|XP_002944564.1| PREDICTED: diaminopimelate decarboxylase-like, partial [Xenopus (Silurana) tropicalis] Length = 214 Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 121/212 (57%), Gaps = 5/212 (2%) Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ--YFGN 266 + A + + DL + + G I HID GGGLGIAY+ + P + + + L+ + G Sbjct: 6 PYLDAVERVLDLVHGIEAAGIAIHHIDFGGGLGIAYNGETPPAADALWRQLLDRLDARGY 65 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +++EPGR LV + G+ +T+V+ +K K F I+D AMND RP +Y+A+H I + Sbjct: 66 GDRALMIEPGRSLVGNAGVCLTEVLYLKPGEQKNFCIVDAAMNDLPRPAMYEAFHGIVPL 125 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A D+VGP+CE+GD++ R +A + GDLL + GAY A + +YN+R Sbjct: 126 --HARPGASTTYDVVGPVCESGDWLGHERALA-VQSGDLLAVLSAGAYCASMASSYNTRG 182 Query: 387 LIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 EI+V+GSQ +IR R + ++ + +P+ Sbjct: 183 RAAEILVDGSQAVLIRRRESVTDIFSNEILPS 214 >gi|219119576|ref|XP_002180545.1| ornithine decarboxylase 2 [Phaeodactylum tricornutum CCAP 1055/1] gi|217408018|gb|EEC47953.1| ornithine decarboxylase 2 [Phaeodactylum tricornutum CCAP 1055/1] Length = 390 Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats. Identities = 82/386 (21%), Positives = 144/386 (37%), Gaps = 42/386 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + F ++ YA+K N + ++KTLA LG D S E+R Sbjct: 7 FYVVDIGVLVSQVYQWRRVFPRVEP--FYAVKCNPDPLIVKTLATLGCNFDCASRNEIRL 64 Query: 89 ALAAPVPAER---IVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + A I+++ K+ + A+ G+ ++E E++ + ++ Sbjct: 65 VMEATKDMPTKPDIIYANPCKSRLGLLEAVCKGVKMVTFDNEMEVQKCASISKNIQLVLR 124 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I T + S + KFG P H+ L A A ++ GV H+GS Sbjct: 125 II----------TDDRGSQCRLSSKFGAPRHKWRLLLAAAQKHGL-QVVGVSFHVGSGCR 173 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + A K R++ G N+Q +D+GGG H D ++ A + Sbjct: 174 DASRYEAALKDAREIFDLAGEYGMNMQVLDIGGGFPGETHRDGHFMYFTEIAEQVAPLID 233 Query: 266 NLQCK---IILEPGRFLVADVGILVTKVISIKKS-----------------------ADK 299 + II EPGR+ VA L VI+ + + D Sbjct: 234 EMFPPSVRIIGEPGRYFVAACATLCCSVIAARTNEMNSSFEPEAIDDKEAAENLPPLQDD 293 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 ++ + ++D I+ P + D+ GP C++ D IA + + Sbjct: 294 YSYYINDGVYGAFNNIMFDHATVRPRILGPGEKIVATEEDVFGPTCDSIDVIARSVLLPK 353 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSR 385 + GD +Y + GAY + ++N Sbjct: 354 LKVGDYMYFQNMGAYTMAAASSFNGF 379 >gi|302654764|ref|XP_003019181.1| ornithine decarboxylase, putative [Trichophyton verrucosum HKI 0517] gi|291182888|gb|EFE38536.1| ornithine decarboxylase, putative [Trichophyton verrucosum HKI 0517] Length = 460 Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats. Identities = 86/385 (22%), Positives = 141/385 (36%), Gaps = 45/385 (11%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N N V++ +A LG+G D S+ E+ Sbjct: 73 PFYVADLGEVYRQHIRWKTNLPRVKP--FYAVKCNPNPQVLRLMAVLGNGFDCASKAEID 130 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA V RI+++ KT + A Q G+ ++ EL + + I Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKEMCPDAELYLRIL 190 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + L A L + + GV H+GS + Sbjct: 191 ----------TDDSASLCRLSMKFGASLSSARPLLELAHGLG-LNVVGVSFHVGSGAEDP 239 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +SF KA + R + + G +++ +DVGGG + Sbjct: 240 KSFIKAVQDARFVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGDAL-----DTYFPP 294 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSA------------------------DKTFVI 303 ++I EPGR+ VA L VI+ + + Sbjct: 295 HIRVIAEPGRYYVATAFTLAANVIARRDVGVEEPLSDSESDSTTPSRASTPSSSGAYMIY 354 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGD--RLHIHADIVGPICETGDFIALNRKIA-LP 360 L+ + ++D H + I+ D I I GP C+ D I+ + L Sbjct: 355 LNDGVYGNFSNIVFDHQHPVAQILTKDDDYTSAPIEYSIWGPTCDGIDVISERVTLNGLL 414 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSR 385 G+ LY E GAY + +N Sbjct: 415 GVGNWLYFENMGAYTQCSATRFNGF 439 >gi|225556784|gb|EEH05072.1| ornithine decarboxylase [Ajellomyces capsulatus G186AR] Length = 446 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 82/373 (21%), Positives = 137/373 (36%), Gaps = 33/373 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N + V++ +A+LG+G D S+ E+ Sbjct: 69 PFYIADLGQVYRQHVRWKKNLGRVKP--FYAVKCNPDPQVLRLMANLGNGFDCASKAEID 126 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A V RI+++ KT + A Q G+ ++ EL + + I Sbjct: 127 CALGAGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPEAELYLRIL 186 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + SL + + + GV H+GS + Sbjct: 187 ----------TDDSASLCRLSMKFGASLSITRSLLEL-AKELKLNVIGVSFHVGSGAEDP 235 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 SF KA + R + Q G +++ +DVGGG Sbjct: 236 RSFVKAVEDSRYVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLGDAL-----DEHFPP 290 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKS-------------ADKTFVILDVAMNDFMRP 314 ++I EPGR+ VA L VI+ + + + L+ + Sbjct: 291 HIRVIAEPGRYYVASAFTLAANVIARRDVSLEMSDSESTSSATEAYMIYLNDGVYGNFSN 350 Query: 315 TLYDAYHEINYIVNPAGD-RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 ++D H + I+ I I GP C+ D I + G+ LY E G Sbjct: 351 IIFDHQHPVPQILTMESPVCTPIEYSIWGPTCDGIDLITERITLPGALDVGNWLYFENMG 410 Query: 373 AYGAVQSGTYNSR 385 AY + +N Sbjct: 411 AYTKCSATCFNGF 423 >gi|326433060|gb|EGD78630.1| hypothetical protein PTSG_01608 [Salpingoeca sp. ATCC 50818] Length = 444 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 85/384 (22%), Positives = 156/384 (40%), Gaps = 35/384 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + + A ++ + +A K+N++ +++ + LG GL+ VS E+ Sbjct: 63 PVNVYHVPTLLQRARELKAALTNVN-RLFFATKSNTHPRLVRAIHSLGFGLECVSLQEVE 121 Query: 88 RALAAPV-PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 +AA + ++F+ T DE A++ G++ + + A + Sbjct: 122 YVMAATHASPDHVLFTPNFATRDEYAAAIKLGVHVTVDNV-----YCLRAWPDVFTGASV 176 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A R++P HK + T + KFG+ I + + + + G+ H GS I Sbjct: 177 ALRIDPVKGRGHHKHVVTAGSQSKFGMGIEDMPEVVQ-ICKDNNITVVGLHCHSGSGIFD 235 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + + ++ +D+GGGLG+ Y + + + + Sbjct: 236 PA----TWNEHAACLIAVAKQFPAVKFMDIGGGLGVPYRFTEKRLNLDKVNEELA-AILH 290 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + +EPGRFLV++ G+L+ +V IK A FV + MN+ +RP LY ++HE+ + Sbjct: 291 PGIDLWMEPGRFLVSECGVLLARVSQIKTKAGVKFVGITAGMNNLLRPALYGSHHELANL 350 Query: 327 VN---------------------PAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGD 364 + + GPICE+ D +R + R GD Sbjct: 351 SHLARTRRGATDGATDGATDGATDGDSGACEPVTVCGPICESADIFGRDRMLPVDTREGD 410 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLI 388 ++ ++ TGAYG YN R Sbjct: 411 VILVDTTGAYGVTMESYYNMRPRA 434 >gi|302910029|ref|XP_003050202.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256731139|gb|EEU44489.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 448 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 80/377 (21%), Positives = 136/377 (36%), Gaps = 36/377 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L + YA+K N + +IK LA LG+G D S+ E+ + Sbjct: 67 FFVADLGEVYRQHLRWKKNLPR--VRPFYAVKCNPDTQIIKLLAELGTGFDCASKAEIEQ 124 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ + +RI+++ KT + +G+ ++ EL + + I Sbjct: 125 VLSLGLSPDRIIYAQPCKTNSYVRYVKTAGVKQMTFDNSDELYKIAKLYPGAELFLRIM- 183 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A A L + + GV H+GS Sbjct: 184 ---------TDDSESMCRFSMKFGAAMETAEGLLALAKQLG-LNVVGVSFHVGSGASDPL 233 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F+KA + + QQ R G N++ +DVGGG + Sbjct: 234 AFYKAVRDAHTVFQQARELGFNMRTLDVGGGFSGDTFETMAEVLREAL---DEFFPPGCG 290 Query: 269 CKIILEPGRFLVADVGILVTK------VISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 I+ EPGR+ VA + V V ++ + ++D Sbjct: 291 VDIMAEPGRYYVATAFTIACNIIARRTVEDPTLDGKGYMVYVNDGVYGNFSNIVFDHQTP 350 Query: 323 INYIVNPAGDRLHIH-------------ADIVGPICETGDFIALN-RKIALPRPGDLLYI 368 + I+ +G L+ I GP C+ D + + R + GD LY Sbjct: 351 VAKILRASGKTLYETPSAHPVPAGEGVEYSIWGPTCDGIDRVTESIRFDPILDVGDWLYF 410 Query: 369 EKTGAYGAVQSGTYNSR 385 E GAY + +N Sbjct: 411 EDMGAYTKCSATQFNGF 427 >gi|302551918|ref|ZP_07304260.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM 40736] gi|302469536|gb|EFL32629.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM 40736] Length = 475 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 94/398 (23%), Positives = 154/398 (38%), Gaps = 17/398 (4%) Query: 31 CYSTTAIEKNYLTFSNAF-----DGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 T I ++ AF G + +A+KA V++ L G G ++ S GE Sbjct: 65 LLDVTGIRESAAELRAAFDAVVAPGTPVLHAFAVKATPLVPVLRLLREEGVGAEVASPGE 124 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L A AA V V KT E+ AL GI N ++ EL+ ++ S ++P Sbjct: 125 LALARAAGVEPAMTVLDSPAKTPAELREALALGIA-VNADNPQELERIDGLMSSAASRSP 183 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDMHIGSQI 204 + RVNP + + + ST KFG+ + + L ++ + H GSQ Sbjct: 184 LGIRVNPQVGGGSIEATSTATATSKFGVALRDEGAREWVVQACLDRPWLTRLHAHTGSQG 243 Query: 205 D--QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + A R+ I +D+GGGL + + SD P+ + YA ++ + Sbjct: 244 IPLSLMARGVAETYALAEEINRRAGRRQIDTLDIGGGLPVNFASDATTPTYAQYARVLAE 303 Query: 263 YF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + + ++ E GR L+A G +V +V K S + + + R Sbjct: 304 EVPGLFDGRYGLVTEFGRSLLAKHGTVVARVEYAKSSGGRAVAVTHAGVQVAARTVYAPG 363 Query: 320 YHEINYIVNPAG----DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + A D + D+ GP C +GD +A R + GD TGAY Sbjct: 364 SWPLRIAAYDAKGRVKDGPVVVQDVAGPACFSGDLLAEGRSMPELEQGDYAAALDTGAYY 423 Query: 376 AVQSGTYNSRLLIPEI-MVNGSQFHIIRPRMTFQELIE 412 YNS +F ++R T E++ Sbjct: 424 FAHHYAYNSLARPGVYGFWPDGRFAVVREAQTVGEVVA 461 >gi|330800165|ref|XP_003288109.1| hypothetical protein DICPUDRAFT_152297 [Dictyostelium purpureum] gi|325081870|gb|EGC35371.1| hypothetical protein DICPUDRAFT_152297 [Dictyostelium purpureum] Length = 429 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 91/399 (22%), Positives = 154/399 (38%), Gaps = 20/399 (5%) Query: 30 YC--YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 Y Y+ + G+ TM A+K N ++K G G ++ S GEL+ Sbjct: 34 YVMMYNLDEFRALAKEACDNLKGLQTM---AVKCNPVMNLMKEAIKCGLGAEVASFGELK 90 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP-- 145 A A +I+F KT E++ AL G NV++ EL+T+ + + ++ Sbjct: 91 IAERAGFEPSKIIFDSPIKTRRELEYALNIGCV-INVDNFEELETIEEIVSTFTQEKKDS 149 Query: 146 --IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + R+NP ++A T +STG KFGI I + +K + + Sbjct: 150 LVLGIRINPQVDAGTLTDLSTGVPTSKFGIGIQHKDKIIDAYRRNKWLKGVHIHIGSQGF 209 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH-- 261 S A K++ + I ++GGGL + + ++ P+ +DYA+ + Sbjct: 210 EIDSISSA-AVKVMELTKEINTLLNKQITFFNMGGGLSVNFDTEQSKPTFTDYANHLKSI 268 Query: 262 -QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 N +I E GR A G++++ + K S D+ + N +R Sbjct: 269 LPELFNGDFLLITEFGRSYWAKCGVVISNIEYTKSSGDRAIAVCHSGANMHIRTVYQFPL 328 Query: 321 HE----INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 + I DI GP C D + R + G+ + + GAY Sbjct: 329 WKLRVTIFDKNGIRKHGDERMTDIAGPCCFAADVLVKERMLPPILRGEYVMVHDCGAYMI 388 Query: 377 VQSGTYNSRLLIPEIM--VNGSQFHIIRPRMTFQELIEL 413 YN RL P VN + +I+ T +E I+ Sbjct: 389 SAYSHYNLRLAPPIYSFDVNTKKIELIKKGETIEEKIQF 427 >gi|118793147|ref|XP_001238365.1| AGAP011807-PA [Anopheles gambiae str. PEST] gi|116117239|gb|EAU75863.1| AGAP011807-PA [Anopheles gambiae str. PEST] Length = 397 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 78/370 (21%), Positives = 139/370 (37%), Gaps = 20/370 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + + + + + + YA+K N + +++TL LG+G D S+GE+ Sbjct: 32 PLHVLDLDDVVRKHYGWCAQMPRVKP--YYAVKCNDDPRILQTLMTLGTGFDCASKGEME 89 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 R L V E I+F+ K+I + A + + EL+ ++Q + Sbjct: 90 RMLGYGVKPESIIFAQPAKSIPSLLYARSKQVSVMTFDGAVELEKIHQYYPEARLVLRMR 149 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 KFG + + + G+ H+GS D+ Sbjct: 150 ----------HDSLKVRCSLGKKFGCDPIAEAPELLRYAATLRMNVIGISFHVGSDCDEH 199 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 E +++A K+ + L + ++ G+ +D+GGG + ++ + Sbjct: 200 EVYYEAVKIAKGLFEYAKTIGYEFSLLDIGGGFPGDNDKPIDRYVQAVNVAIDQFFPAES 259 Query: 268 QCKIILEPGRFLVADVGIL-----VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 +II EPGR+ V+ L +V+ K+ + +ND + T Y E Sbjct: 260 DIRIIAEPGRYYVSSAVTLVSFVDSKRVMKEKQPDGTEKTRMYYYLNDGIFGTFYCTALE 319 Query: 323 INYIVNPAGDRLHIHAD--IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 +V +L D + GP C D IA R + GD + E GAYG V + Sbjct: 320 GQQVVPIVRSKLTKRYDTTLWGPTCHVVDKIAEAR-LPELDVGDSVVFENVGAYGMVLAN 378 Query: 381 TYNSRLLIPE 390 +N L Sbjct: 379 QFNGFPLPKV 388 >gi|302507226|ref|XP_003015574.1| ornithine decarboxylase, putative [Arthroderma benhamiae CBS 112371] gi|291179142|gb|EFE34929.1| ornithine decarboxylase, putative [Arthroderma benhamiae CBS 112371] Length = 460 Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats. Identities = 86/385 (22%), Positives = 141/385 (36%), Gaps = 45/385 (11%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N N V++ +A LG+G D S+ E+ Sbjct: 73 PFYVADLGEVYRQHIRWKTNLPRVKP--FYAVKCNPNPQVLRLMAVLGNGFDCASKAEID 130 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA V RI+++ KT + A Q G+ ++ EL + + I Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKEMFPDAELYLRIL 190 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + L A L + + GV H+GS + Sbjct: 191 ----------TDDSASLCRLSMKFGASLSSARPLLELAHGLG-LNVVGVSFHVGSGAEDP 239 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +SF KA + R + + G +++ +DVGGG + Sbjct: 240 KSFIKAVQDARFVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGDAL-----DTYFPP 294 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSA------------------------DKTFVI 303 ++I EPGR+ VA L VI+ + + Sbjct: 295 HIRVIAEPGRYYVATAFTLAANVIARRDVGVEEPLSDSESDSTTPSRASTPSSSGAYMIY 354 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGD--RLHIHADIVGPICETGDFIALNRKIA-LP 360 L+ + ++D H + I+ D I I GP C+ D I+ + L Sbjct: 355 LNDGVYGNFSNIVFDHQHPVAQILTKDDDYTSAPIEYSIWGPTCDGIDVISERVTLNGLL 414 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSR 385 G+ LY E GAY + +N Sbjct: 415 GVGNWLYFENMGAYTQCSATRFNGF 439 >gi|254502587|ref|ZP_05114738.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Labrenzia alexandrii DFL-11] gi|222438658|gb|EEE45337.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Labrenzia alexandrii DFL-11] Length = 376 Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats. Identities = 83/373 (22%), Positives = 146/373 (39%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F+ + DT V YA+KAN ++ L +LGS D S GE+ Sbjct: 17 PCVVVDLDIVRDNFEAFARSLP--DTSVYYAVKANPAPEILNLLENLGSSFDCASVGEIE 74 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 LA A RI + K +I A + G+ F V+ E++ + + A + Sbjct: 75 MVLATGADASRISYGNTIKKERDIARAFEFGVRLFAVDCVEEVEKIARVAPGSRVFCRVL 134 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + A KFG + +A L ++ GV H+GSQ + Sbjct: 135 CD---GVGAE-------WPLSRKFGCDPQMAPDVLDHAHRLG-LEAYGVSFHVGSQQANL 183 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QYFG 265 +++ A + + +++ G ++ +++GGG Y D A ++FG Sbjct: 184 QAWDFALAMAAGVFREMALRGIELKMVNMGGGFPTRYLKDVPGVPRYGEAIFQALSKHFG 243 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N I+EPGR +V + G++ T+V+ I K ++ V I Y Sbjct: 244 NRLPSTIIEPGRGMVGNAGLIETEVVLISKKSETDEVRWVYLDIGKFHGLAETMDEAIRY 303 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 + D + GP C++ D + ++ + GD + IE GAY S Sbjct: 304 PIKTPRDGDRTAPCVLAGPTCDSVDVLYEKTPYELPVSLSIGDKVLIEACGAYTTTYSSV 363 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 364 GFNGFAPLASYVI 376 >gi|71280920|ref|YP_269410.1| Orn/DAP/Arg decarboxylase family protein [Colwellia psychrerythraea 34H] gi|71146660|gb|AAZ27133.1| Orn/DAP/Arg decarboxylase, family 2 [Colwellia psychrerythraea 34H] Length = 425 Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 88/399 (22%), Positives = 149/399 (37%), Gaps = 18/399 (4%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 ++K AF + +A+KAN+ V++ L G G ++ S GEL A+ Sbjct: 26 VMDLDGLKKTVNDAYAAFP-ANFFHTFAVKANALVKVLEPLREYGMGAEVASPGELLIAV 84 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A AE I+F KT+ ++ ++ GI + + + I FRV Sbjct: 85 TAGFTAENIIFDSPAKTLQDLRTCIKKGIALNIDNLQELERIDALMLEFPESTSIIGFRV 144 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIES 209 NP I ST KFG + + S + + H GSQ ++ Sbjct: 145 NPQIGGGKIGSTSTATATSKFGYALVDGDNRNELISIYKKRPWLKSIHTHSGSQGCELSL 204 Query: 210 FHKAFKLLRDLTQQLRSNG--HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH---QYF 264 K K++ +L +++ S I +D+GGGL + + S+ PS DYA ++ Sbjct: 205 MAKGIKIITELAEEINSLVGLQQITRLDIGGGLPVNFSSEIIKPSFKDYADILKAEVPLL 264 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + ++ E GR +VA G+++T+V K S + R I Sbjct: 265 FTDKYQVKTEFGRAIVAKNGVIITRVEYTKNSGGRHIATTHAGAQIITRTAFLPKSWPIR 324 Query: 325 YIVNPAGDRLH-------IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + D+ GP C GD I N+ + D + + TG Y Sbjct: 325 VTGYTTKGEERTAQTSEVVTTDVAGPCCFAGDLICSNQPLPKLESNDYVMVHDTGGYYFT 384 Query: 378 QSGTYNSRLLIPEIMV----NGSQFHIIRPRMTFQELIE 412 YNS + V + IR + ++++ Sbjct: 385 NHFDYNSLPRVAIYTVAGHDDDLTIECIRQGESLEDVLN 423 >gi|313229650|emb|CBY18465.1| unnamed protein product [Oikopleura dioica] Length = 435 Score = 153 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 96/397 (24%), Positives = 159/397 (40%), Gaps = 12/397 (3%) Query: 27 TPFY-CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 +P Y + + +A + +A+K N + V+ + G G + S GE Sbjct: 32 SPVLDLYDLEGLRGRFKEVQDALPSWNH--AFAIKTNPIRGVMLEAKNCGLGAEAASIGE 89 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE-SESELKTLNQRAVSLGKKA 144 L AL +IV+ KT + AL +G+ E E +++ Sbjct: 90 LEHALQLGFDRSKIVYDSPVKTKAHLKHALNAGVVINLDNLEEIEKVNQLLPDLNVDVTG 149 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I RVNP++ A ST K KFG+P+ L I G+ HIGSQ Sbjct: 150 KIGMRVNPNVGAGKIAMSSTAGKSSKFGLPMTGEFEDEVVKIILENSWIQGLHQHIGSQG 209 Query: 205 DQIESFHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ + L L +++ I++IDVGGG+ Y SD+ + ++YA L+++ Sbjct: 210 ISLDQLTLGVERLVALARKINELAGTKQIKYIDVGGGIPTDYESDNEKVAYAEYAKLVNE 269 Query: 263 YFGN-LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 N + E GR LV I V+KV ++K D+ V+ N F+R Sbjct: 270 RVPNLDEFNFHSEFGRSLVTKYAISVSKVETVKTWGDRITVLTHFGSNQFLREVYLPDTW 329 Query: 322 EINYIVNPAGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 V + D+ GP+C GD++A R + +PGD + + G Y Sbjct: 330 FHRMSVLDQNGDPKVSDLIEQDVGGPLCFQGDYLAKARALPEIKPGDYIVMHDIGGYTYA 389 Query: 378 QSGTYNSRLLIPEIMVNGSQ-FHIIRPRMTFQELIEL 413 +NS + S+ F+ + R + E + Sbjct: 390 LYSRFNSIQAPAVYGYDASENFYEFKSRESLAETLSF 426 >gi|156040381|ref|XP_001587177.1| hypothetical protein SS1G_12207 [Sclerotinia sclerotiorum 1980] gi|154696263|gb|EDN96001.1| hypothetical protein SS1G_12207 [Sclerotinia sclerotiorum 1980 UF-70] Length = 441 Score = 153 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 83/375 (22%), Positives = 141/375 (37%), Gaps = 36/375 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + ++ + + YA+K N + VI+ LA LG+G D S+GE+ + Sbjct: 64 FFVADLGEVYRQHMRWKRNLPRVKP--FYAVKCNPDPQVIRLLAELGTGFDCASKGEIEQ 121 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L + RI+++ KT + A + G+ ++ EL + + I Sbjct: 122 ILKTGIDPARIIYAQPCKTNSYVRYAAKQGVKQMTFDNSDELHKIKKLFPGAELFLRI-- 179 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +T S + KFG + L A A L + + GV H+GS Sbjct: 180 --------STDDSSSLCQLSLKFGATMDTTSDLLALARELD-LNVVGVSFHVGSGASDPL 230 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F +A + + +Q R+ G+ + +DVGGG + + + Sbjct: 231 AFREAVQDAHTVFEQARTYGYYMHTLDVGGGFCSETFEKMAAALNDAL-----EEYMPKN 285 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADK------TFVILDVAMNDFMRPTLYDAYHE 322 KII EPGR+ VA+ L VI+ + D + L+ + ++D + Sbjct: 286 IKIIGEPGRYYVANAFTLACNVIARRTVEDPVSTEKSYMLYLNDGLYGNFSSIMFDHQNP 345 Query: 323 INYIVNPAGDRLH-----------IHADIVGPICETGDFI-ALNRKIALPRPGDLLYIEK 370 I ++ I GP C+ D I A R GD LY E Sbjct: 346 IAQVLRTGKRSYFDTLASQATLGGTEYSIWGPTCDGIDRISASIRFDHNLDVGDWLYFEG 405 Query: 371 TGAYGAVQSGTYNSR 385 GAY + +N Sbjct: 406 MGAYTKCSATRFNGF 420 >gi|148252725|ref|YP_001237310.1| putative diaminopimelate decarboxylase [Bradyrhizobium sp. BTAi1] gi|146404898|gb|ABQ33404.1| putative diaminopimelate decarboxylase [Bradyrhizobium sp. BTAi1] Length = 173 Score = 153 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 82/173 (47%), Positives = 118/173 (68%) Query: 248 HRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + + YA+++ + NL C ++ EPGR +V + GILV VI +K K FVI+D A Sbjct: 1 MQCHRNPAYAAMVKRVSHNLGCTLMFEPGRMIVGNAGILVANVIYVKHGEAKNFVIIDAA 60 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 MND +RPTLY+A+H+I +V PA AD+VGP+CE+GD++AL+R + P PGDLL Sbjct: 61 MNDLIRPTLYEAHHDILPVVQPAPGAPSFTADVVGPVCESGDYLALDRTLPEPAPGDLLA 120 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAWL 420 I +GAYGAVQ+ TYN+R L+PE++V G Q +IRPR+ ++LI +D+ WL Sbjct: 121 IMTSGAYGAVQACTYNTRALVPEVLVKGDQAAVIRPRIEVEQLIAMDTPAPWL 173 >gi|254227376|ref|ZP_04920808.1| Diaminopimelate decarboxylase [Vibrio sp. Ex25] gi|262396359|ref|YP_003288212.1| vibrioferrin decarboxylase protein PvsE [Vibrio sp. Ex25] gi|151939988|gb|EDN58814.1| Diaminopimelate decarboxylase [Vibrio sp. Ex25] gi|262339953|gb|ACY53747.1| vibrioferrin decarboxylase protein PvsE [Vibrio sp. Ex25] Length = 400 Score = 153 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 85/368 (23%), Positives = 149/368 (40%), Gaps = 13/368 (3%) Query: 18 LEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + LA P Y Y A+E++ + + + YA KAN + ++KTLA Sbjct: 15 VHTLAQQQNQPLCAYVYDLNALEEHIKQLRHVLPR-NVELFYAAKANPSGPILKTLAPYV 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S GEL + + ++F G GK E+ A++ + +VES +EL+ + Sbjct: 74 DGFEAASGGELAHLHQQQLD-KPLIFGGPGKMPSELQQAIELDVDAIHVESLTELQRIGA 132 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 L + A I R+N DI T K++ G K FG+ ++ + P V + G Sbjct: 133 LTERLNRPASIFLRMNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKG 192 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI-DVGGGLGIAYHSDHRPPSSS 254 H+ S +E + + + + + + ++GGG+GI Y + + Sbjct: 193 FHFHLMSHQLDVERHLALMQRYFQVVKAWQQEFELGELMINLGGGMGINYQNPEQHFPWM 252 Query: 255 DYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ + + E GRF+ A G V +V+ IK++ + FVI + F Sbjct: 253 EFCDKLEFLIAKEQVQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHF 312 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIH-----ADIVGPICETGDFIALNRKIALPRPGDLL 366 P H + + + A G +C D +A N+ +A GD + Sbjct: 313 RTPAAQSHDHPFVILKSEQHHEISHPIQHAQATFAGQLCTPKDVLARNQHVAHVDIGDYV 372 Query: 367 YIEKTGAY 374 GAY Sbjct: 373 VFTLAGAY 380 >gi|326470122|gb|EGD94131.1| ornithine decarboxylase [Trichophyton tonsurans CBS 112818] gi|326484361|gb|EGE08371.1| ornithine decarboxylase [Trichophyton equinum CBS 127.97] Length = 460 Score = 153 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 86/385 (22%), Positives = 141/385 (36%), Gaps = 45/385 (11%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N N V++ +A LG+G D S+ E+ Sbjct: 73 PFYVADLGEVYRQHIRWKTNLPRVKP--FYAVKCNPNPQVLRLMAVLGNGFDCASKAEID 130 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA V RI+++ KT + A Q G+ ++ EL + + I Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKEMCPDAELYLRIL 190 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + L A L + + GV H+GS + Sbjct: 191 ----------TDDSASLCRLSMKFGASLSSARPLLELAHGLG-LNVVGVSFHVGSGAEDP 239 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +SF KA + R + + G +++ +DVGGG + Sbjct: 240 KSFIKAVQDARFVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGDAL-----DNYFPP 294 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSA------------------------DKTFVI 303 ++I EPGR+ VA L VI+ + + Sbjct: 295 HIRVIAEPGRYYVATAFTLAANVIARRDVGVEEPLSDSESDSTTPSRASTPSSSGAYMIY 354 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGD--RLHIHADIVGPICETGDFIALNRKIA-LP 360 L+ + ++D H + I+ D I I GP C+ D I+ + L Sbjct: 355 LNDGVYGNFSNIVFDHQHPVAQILTKDDDYASAPIEYSIWGPTCDGIDVISERITLNGLL 414 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSR 385 G+ LY E GAY + +N Sbjct: 415 GVGNWLYFENMGAYTQCSATRFNGF 439 >gi|321451794|gb|EFX63336.1| hypothetical protein DAPPUDRAFT_204767 [Daphnia pulex] Length = 517 Score = 153 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 85/377 (22%), Positives = 134/377 (35%), Gaps = 27/377 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I + + + YA+K N N+ V++TLA LG+ D S+ E+ + Sbjct: 43 FYVLDVGDIIRKHKEWK--LKMPRVAPFYAVKCNDNRTVLETLASLGASFDCASKSEIAK 100 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V +RI+F+ K + I A + ++ESEL + + + I Sbjct: 101 VLDLGVETDRIIFANPAKQVSHIRYASSVNVQAMTFDNESELYKVKEHHPTAKMVLRIRC 160 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 KFG L A A+ L + G+ H+GS D+ E Sbjct: 161 DAKR----------VQCPLGIKFGAFPKDAPRLVALAAKLGV-DLVGISFHVGSGCDEPE 209 Query: 209 SFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 F + + R + R G N+ +D+GGG S ++ +SL + Sbjct: 210 VFERCIVIGRQIFDLAARDYGINMTLLDLGGGYPGNRGSSINSIAAIVNSSLDRHFPEGC 269 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 II EPGR+ VA L T++ ++ + Y Sbjct: 270 GVDIIAEPGRYYVASAFTLATRIHGRRQLTNDDEDADGPRTPANTSYFYYINDGVYGSFN 329 Query: 328 NPAGD-------------RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 D +I GP C+ D IA N ++ L GD L E GAY Sbjct: 330 CMLYDHAVVTPLLLEPRPGPDFSCNIWGPTCDGLDRIATNAQLPLMDVGDWLIFEDMGAY 389 Query: 375 GAVQSGTYNSRLLIPEI 391 +G +N + Sbjct: 390 TLAAAGCFNGFPVPKVY 406 >gi|58038915|ref|YP_190879.1| ornithine decarboxylase [Gluconobacter oxydans 621H] gi|58001329|gb|AAW60223.1| Ornithine decarboxylase [Gluconobacter oxydans 621H] Length = 379 Score = 153 bits (385), Expect = 8e-35, Method: Composition-based stats. Identities = 91/384 (23%), Positives = 151/384 (39%), Gaps = 24/384 (6%) Query: 21 LAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA TP + +Y +A + YA+KAN A++ L LGS D Sbjct: 9 LAEQQPATPCLVVDLDVVGAHYRALHDALPE--AKIYYAIKANPAPAILDRLVALGSSFD 66 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 + S E+R L A +RI + K + I A GI F +S EL+ L + A Sbjct: 67 VASPAEIRMCLDAGATPDRISYGNTLKKAEWIREAHDLGISLFVFDSIEELEKLAKHAPG 126 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 +A KFG + +L A L +K G+ H Sbjct: 127 ARVFCRLAVENEGA----------DWPLSRKFGTTLSNARALMLRARDLG-LKPYGLSFH 175 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYA 257 +GSQ + ++ A L LR+ G ++Q +++GGG Y + Sbjct: 176 VGSQQTGVAAYDHAIAKAAGLYHDLRAQGVDLQMLNLGGGFPTHYRENVPSVQDFADTIH 235 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----KTFVILDVAMNDFMR 313 + + +F + +I+LEPGR++V G++ ++VI + + +V LD+ + Sbjct: 236 ASLRTHFPDGAPEILLEPGRYMVGQSGVVSSEVILVSRRGGAVTDPRWVYLDIGRFGGLA 295 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEK 370 T +A + D + GP C+ D + +I LP GD + I Sbjct: 296 ETEGEAIRYTFRTSRDSDDATCSPCVLAGPSCDGVDIMYEKNRIPLPDSLECGDRVEILA 355 Query: 371 TGAYGAVQSGT-YNSRLLIPEIMV 393 TGAY + + +N + E + Sbjct: 356 TGAYVSTYASVGFNGFPPLTEYYI 379 >gi|294625584|ref|ZP_06704209.1| diaminopimelate decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600104|gb|EFF44216.1| diaminopimelate decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 398 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 81/373 (21%), Positives = 142/373 (38%), Gaps = 7/373 (1%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y A++++ + YA KAN+ +++TLA G + S GEL Sbjct: 27 AYVYDLAALDRHAAWMRAQLP-APCELFYAAKANAEPPILRTLAPHVDGFEAASGGELAW 85 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A P ++F G GK E+ A +VES SEL+ L + A G+ P+ Sbjct: 86 L-HAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHVESLSELERLAEVAAHAGRCVPVFL 144 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+N + ++ G + FG+ +H+ P ++++G H+ S Sbjct: 145 RMNIAVPGAQSTRLMMGGQPSPFGLDPCDLHAAMQRLQASPSLRLTGFHFHLMSHQRDAT 204 Query: 209 SFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSSDYAS--LIHQYFG 265 + + QQ R ++ GGG G+ Y + + + + Sbjct: 205 AQLHLIAAYLRIVQQWRHTYALGPLRVNAGGGFGVDYLAPDASFDWAGFCAGLPALLRDH 264 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPGR++ A G + +V+ +K+S F I + F P H Sbjct: 265 GTDLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQGHDHPFRV 324 Query: 326 IVNPAGDR-LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYN 383 + +VG +C D +A ++ +A PGD L GAY S + Sbjct: 325 LRGERAPVLRETPVTLVGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQQFL 384 Query: 384 SRLLIPEIMVNGS 396 ++ + Sbjct: 385 MHPPPQKVFLTEG 397 >gi|320354385|ref|YP_004195724.1| Diaminopimelate decarboxylase [Desulfobulbus propionicus DSM 2032] gi|320122887|gb|ADW18433.1| Diaminopimelate decarboxylase [Desulfobulbus propionicus DSM 2032] Length = 404 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 70/393 (17%), Positives = 137/393 (34%), Gaps = 11/393 (2%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD----TMVCYALKA 61 Y EG L +++LA TP + YS + +N A G + YA+KA Sbjct: 17 YREGRLFFAGRPVQELADQFGTPAFVYSAERVRQNLERLHAALSGAGLAGRFSLLYAMKA 76 Query: 62 NSNQAVIKTLAHLG-SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 N ++ L G G+D S E+ A++ +I F+ + ++ Sbjct: 77 NRFAPLLTFLRQSGLCGIDACSPAEVEHAVSCGFSPAQISFTATSLSTRDLTAL----AR 132 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 + + + + +L I RVNP + Sbjct: 133 YPGLFMDCDSLHAIRCWGALKPGTQIGLRVNPAMGIGRAANDKLHYAGATTTKFGIYWEQ 192 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 T + +H + + + + + + ++ +++GGGL Sbjct: 193 FAEALETAKAYDLQVRKIHFHTGCGYLTPQLEQLERIIAHCFRFVEAAGEVERVNIGGGL 252 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 G+ + RP +A+++ F + +EPG +L+ D G+L+ + +++ D+T Sbjct: 253 GVPHLDSDRPLDLDRWAAILQGQFAGRGLHVEIEPGDYLLKDAGLLLVEKTFVERKKDRT 312 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 FV +D N P Y + + + +VG I E D + Sbjct: 313 FVGVDAGFNIAPEPAYYALPFQPLPLRYDPSPCTEM--SVVGNINEALDVWYEQAWLPDL 370 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 L + GAY + + + R E ++ Sbjct: 371 SSQSHLALINAGAYSSAMASHHCLRGQFKEFLL 403 >gi|330958646|gb|EGH58906.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 402 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 82/377 (21%), Positives = 147/377 (38%), Gaps = 11/377 (2%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + Y A++++ A + YA+KANS +++TLA L SG +I S GE+ Sbjct: 25 AFIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIE- 82 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + A + VFSG GK ++ AL + + ++ES +E++ L A G+ P+ Sbjct: 83 RVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEEAGRVQPVFI 142 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+NP + A K++ FGI + + + + G +H S +E Sbjct: 143 RINPQLPAAQSSKLAMAGTATPFGIDEADLADAVRLVDSATHLTLKGFHVHAMSHQMSVE 202 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHI--DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + Q ++ + + GG + ++ + + G Sbjct: 203 RHEQLLDFYLQRWQAWKALARYPEQLTHFNVGGGIGVDYLNNPQFDWQRLCRYLKKRLGE 262 Query: 267 LQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 I EPGRF+ A G V +V+ K S + F++ + F P H + Sbjct: 263 QPDAPILRFEPGRFISAYCGYYVIEVLDRKTSHGEHFLVCRGGTHQFRLPVAQGHDHPVV 322 Query: 325 YIVNPAGDR--LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA--VQSG 380 ++ + +VG +C D ++ R GDLL + GAYG + Sbjct: 323 HLPSVPPTAASPEKVYTVVGQLCTPKDVLSRRRPFKDVSIGDLLVLPMAGAYGYNISHA- 381 Query: 381 TYNSRLLIPEIMVNGSQ 397 + P+ V + Sbjct: 382 DFLCHPRPPQHFVRNGE 398 >gi|254463855|ref|ZP_05077266.1| Orn/DAP/Arg decarboxylases family 2 [Rhodobacterales bacterium Y4I] gi|206684763|gb|EDZ45245.1| Orn/DAP/Arg decarboxylases family 2 [Rhodobacterales bacterium Y4I] Length = 389 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 81/383 (21%), Positives = 142/383 (37%), Gaps = 20/383 (5%) Query: 18 LEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L+ +A P + A+ + Y + YA+KAN V++TL LGS Sbjct: 20 LQHIAQNRFDRPTLVIDSHAVARQYQALDRGLGR--ARIHYAVKANPAPEVLETLVRLGS 77 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D S E+ LAA AE+I F K +I A GI F +++ EL+ L + Sbjct: 78 NFDAASRAEIEMCLAAGARAEQITFGNTIKRPADIAFAHGIGITHFAADAQEELEKLAEF 137 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A + + KFG SL A+ L + G+ Sbjct: 138 APGAHVCLRVIVEASGA----------DWPLSRKFGSSASMALSLMDAAAGLGLT-VHGL 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG-IAYHSDHRPPSSSD 255 H+GSQ + + ++ R+ GH+++ +++GGG + Sbjct: 187 SFHVGSQTRDPLMWAPVLDQVAEVWTAGRAAGHDLKLVNIGGGFPASYKTEVMGAEDYAR 246 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-ISIKKSADKTFVILDVAMNDFMRP 314 +++ EPGR LVA+ G + +V + +K AD F + + + F Sbjct: 247 AVMEQVDARFPDAAEVMAEPGRGLVAEAGAIAAEVLLVSRKHADDMFRWVYLDIGKFSGL 306 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKT 371 I + GP C++ D + ++ L + GD + I Sbjct: 307 AETMDEAIRYQITTSREHEPTGPCVLAGPSCDSADVLYEKQLVQLPLGLKAGDRVVIHSC 366 Query: 372 GAYGAVQSGT-YNSRLLIPEIMV 393 GAY + + +N + +++ Sbjct: 367 GAYTSTYASVGFNGFPPLDVVVI 389 >gi|240281644|gb|EER45147.1| ornithine decarboxylase [Ajellomyces capsulatus H143] Length = 446 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 84/373 (22%), Positives = 139/373 (37%), Gaps = 33/373 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N + V++ +A+LG+G D S+ E+ Sbjct: 69 PFYIADLGQVYRQHVRWKKNLGRVKP--FYAVKCNPDPQVLRLMANLGNGFDCASKAEID 126 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A V RI+++ KT + A Q G+ ++ EL + + I Sbjct: 127 CALGAGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPEAELYLRIL 186 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + SL A L + + GV H+GS + Sbjct: 187 ----------TDDSASLCRLSMKFGASLSITRSLLELAKEL-KLNVIGVSFHVGSGAEDP 235 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 SF KA + R + Q G +++ +DVGGG Sbjct: 236 RSFVKAVEDSRYVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLGDAL-----DEHFPP 290 Query: 268 QCKIILEPGRFLVADVGILVTKVISIK-------------KSADKTFVILDVAMNDFMRP 314 ++I EPGR+ VA L VI+ + + + + L+ + Sbjct: 291 HIRVIAEPGRYYVASAFTLAANVIARRDVSLEMSDSDSTSSATEAYMIYLNDGVYGNFSN 350 Query: 315 TLYDAYHEINYIVNPAGD-RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 ++D H + I+ I I GP C+ D I + G+ LY E G Sbjct: 351 IIFDHQHPVPQILTMESPVCTPIEYSIWGPTCDGIDLITERITLPGALDVGNWLYFENMG 410 Query: 373 AYGAVQSGTYNSR 385 AY + +N Sbjct: 411 AYTKCSATCFNGF 423 >gi|325087796|gb|EGC41106.1| ornithine decarboxylase [Ajellomyces capsulatus H88] Length = 446 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 84/373 (22%), Positives = 139/373 (37%), Gaps = 33/373 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N + V++ +A+LG+G D S+ E+ Sbjct: 69 PFYIADLGQVYRQHVRWKKNLGRVKP--FYAVKCNPDPQVLRLMANLGNGFDCASKAEID 126 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A V RI+++ KT + A Q G+ ++ EL + + I Sbjct: 127 CALGAGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPEAELYLRIL 186 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + SL A L + + GV H+GS + Sbjct: 187 ----------TDDSASLCRLSMKFGASLSITRSLLELAKEL-KLNVIGVSFHVGSGAEDP 235 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 SF KA + R + Q G +++ +DVGGG Sbjct: 236 RSFVKAVEDSRYVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLGDAL-----DEHFPP 290 Query: 268 QCKIILEPGRFLVADVGILVTKVISIK-------------KSADKTFVILDVAMNDFMRP 314 ++I EPGR+ VA L VI+ + + + + L+ + Sbjct: 291 HIRVIAEPGRYYVASAFTLAANVIARRDVSLEMSDSDSTSSATEAYMIYLNDGVYGNFSN 350 Query: 315 TLYDAYHEINYIVNPAGD-RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 ++D H + I+ I I GP C+ D I + G+ LY E G Sbjct: 351 IIFDHQHPVPQILTMESPVCTPIEYSIWGPTCDGIDLITERITLPGALDVGNWLYFENMG 410 Query: 373 AYGAVQSGTYNSR 385 AY + +N Sbjct: 411 AYTKCSATCFNGF 423 >gi|291232632|ref|XP_002736260.1| PREDICTED: Ornithine DeCarboxylase family member (odc-1)-like [Saccoglossus kowalevskii] Length = 614 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 112/336 (33%), Positives = 176/336 (52%), Gaps = 7/336 (2%) Query: 57 YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 YA+KAN+N +++ L LG +VS EL+ A+ A +++VF+G GKT EI+LA+ Sbjct: 279 YAVKANNNLTILRILRDLGCTAVLVSGNELKLAMLAGFSTDKLVFNGNGKTQWEIELAVT 338 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 + ++ ++ A LGKK + R+NPDI+ H+ ++TG KFGIP Sbjct: 339 HDVMINADSLF-DIDHISSVARQLGKKVKMLLRMNPDIDPEVHRYLATGSAVSKFGIPET 397 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + + A + + + G+ HIGS I I+ F + ++ G +++++V Sbjct: 398 DLDTALGKAGSDDNIDLVGLHCHIGSTITNIDVFRATVSAMLRYNNHVQGRGFRLKYLNV 457 Query: 237 GGGLGIAYHSDHRPPSSS-----DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 GGGLGI Y + S + I +ILEPGR ++A GILV+KVI Sbjct: 458 GGGLGINYRKYIQGGSPGIPSGGELIDSIADKIKESGLCLILEPGRSIIASAGILVSKVI 517 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 IK++ ++F+++D +M + MRP LY AYH I I +VGP+CE GD++ Sbjct: 518 GIKRNETRSFLVIDGSMTEVMRPCLYGAYHHIQLIEPVKTSGTR-RYSVVGPVCECGDYL 576 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 A + ++ +P G L I GAY A S YN R+ Sbjct: 577 AEDIELPIPHEGCGLAIRDAGAYCASMSSNYNMRVR 612 >gi|159478827|ref|XP_001697502.1| ornithine decarboxylase 1 [Chlamydomonas reinhardtii] gi|158274381|gb|EDP00164.1| ornithine decarboxylase 1 [Chlamydomonas reinhardtii] Length = 542 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 76/371 (20%), Positives = 138/371 (37%), Gaps = 27/371 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY +++ + + A + YA+K N ++K L LG+G D S+GEL Sbjct: 155 FYVVDLANVQRMFKAWRAAMPR--VVPFYAVKCNPEPGILKLLNALGAGFDCASKGELDM 212 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+F+ K +I A + + ++ SEL + Q I Sbjct: 213 MLRMGVSPNRIIFAHPCKRASDIRYAREHNVQYTTFDTVSELHKIAQMNPDFKCVLRIR- 271 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + K+G + + L A L +++ GV H+GS + Sbjct: 272 ---------ADDPDARVPLGLKYGAEVSEADVLLRTAKELG-LQVVGVSFHVGSACQNLS 321 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH----QYF 264 +F A + R + + + G N++ +D+GGG + ++ + Sbjct: 322 TFSGAIENARKVFDEAGALGFNMELLDIGGGFTGHFDEMGNVMFGEIANTINAALATNFP 381 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKS-----ADKTFVILDVAMNDFMRPTLYDA 319 + ++I EPGR+ L+T V + + K L + LYD Sbjct: 382 PEMGVRVIAEPGRYFAETSSTLLTPVYGQRDRVAADGSVKKDYWLTDGLYGSFNCILYDG 441 Query: 320 YHEINYIVN-----PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + +V + D + + GP C++ D + + + + R GD L GAY Sbjct: 442 QNPGYKVVRSPLMADSTDSRTFLSTLWGPTCDSADCVYKDVTLPVLRNGDWLMWNNAGAY 501 Query: 375 GAVQSGTYNSR 385 + +N Sbjct: 502 TVAGACDFNGI 512 >gi|328469448|gb|EGF40394.1| vibrioferrin decarboxylase protein PvsE [Vibrio parahaemolyticus 10329] Length = 400 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 88/368 (23%), Positives = 149/368 (40%), Gaps = 13/368 (3%) Query: 18 LEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + LA P Y Y A+E++ + + + YA KAN + ++KTLA Sbjct: 15 VHTLAQQQNQPLCAYLYDLNALEEHIKQLRHVLPK-NVELFYAAKANPSGPILKTLAPYV 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S GEL + + ++F G GK E+ A++ + +VES +ELK + Sbjct: 74 DGFEAASGGELAHLHQQQLD-KPLIFGGPGKMPSELQQAIELDVDAIHVESLTELKRIGA 132 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 L + A I R+N DI T K++ G K FG+ ++ + P V + G Sbjct: 133 LTERLNRPASIFLRMNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKG 192 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI-DVGGGLGIAYHSDHRPPSSS 254 H+ S +E + + + + + + ++GGG+GI Y + + Sbjct: 193 FHFHLMSHQLDVERHLALMQRYFQVVKTWQQEFELGELMINLGGGMGINYQNPEQHFPWM 252 Query: 255 DYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ + + E GRF+ A G V +V+ IK++ + FVI + F Sbjct: 253 EFCDKLEFLIAKEQVQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHF 312 Query: 312 MRPTLYDAYHEIN-----YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 P H + H A VG +C D +A N+ +A GD + Sbjct: 313 RTPAAQSHDHPFVILKSEQHHEVSHPIQHAQATFVGQLCTPKDVLARNQHVAHVNIGDYV 372 Query: 367 YIEKTGAY 374 GAY Sbjct: 373 VFTLAGAY 380 >gi|1781297|emb|CAA71498.1| ornithine decarboxylase [Nicotiana tabacum] Length = 433 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 69/372 (18%), Positives = 131/372 (35%), Gaps = 21/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + +A + YA+K N + + L+ +GS D S E+ Sbjct: 66 PFYVLDLGEVVSLMDQWKSALP--NIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + +RIVF+ K +I A + G+ +SE E+ + + + Sbjct: 124 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVNKIRKHHPKSE----LL 179 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+ P ++ N + + + A+ + +SGV HIGS Sbjct: 180 LRIKPMLDGNARCPMGPKY------GALPEEVDPLLRAAQAARLTVSGVSFHIGSGDADS 233 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ A +++ + G + + GG + H + A H + Sbjct: 234 NAYLGAIAAAKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQH-FDDEP 292 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + II EPGRF L T +I + + ++ + M LYD + Sbjct: 293 ELTIIAEPGRFFAETAFALATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPL 352 Query: 328 NPAGDRLHIHA--------DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +R ++ + GP C+ D + + ++ + D L GAY Sbjct: 353 AVLSNRSNVTCGGSKKFPTTVFGPTCDAFDTVLRDYQLPELQVNDWLVFPNMGAYTKAAE 412 Query: 380 GTYNSRLLIPEI 391 +N + Sbjct: 413 SNFNGFNNSAIV 424 >gi|34495197|emb|CAE02644.1| ornithine decarboxylase [Lotus japonicus] Length = 422 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 125/359 (34%), Gaps = 18/359 (5%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 + + + F YA+K N + ++I LA LGS D S+ E++ L Sbjct: 63 VLDLGVVMELMDKWVTKFP--TVQPFYAVKCNPDISLIGALAALGSSFDCASKAEIQIVL 120 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 + + +RIV++ K+ +I A G+ +S E+ + + I + Sbjct: 121 SLGISPDRIVYANPCKSESDIKYAATVGVNLATYDSVYEVDKVQKWHPKCELLLRIKYDS 180 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 + + K + + A+ GV ++GV HIGS + Sbjct: 181 EGALASLGVKY-----------GALPEEVPELLKAAEAAGVNVTGVSFHIGSGGADPLAL 229 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCK 270 A + + + + G + I GG + A+++ + + Sbjct: 230 SGAIEAAKSVFEMASHFGMSRMSILDIGGGFTCGPELDVAATKVK-AAILAHFGDHQGLV 288 Query: 271 IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA----YHEINYI 326 +I EPGR+ LV++VI + + ++ + + +YD + Sbjct: 289 VIAEPGRYFTETAFTLVSRVIGKRVRGELREYWINDGVYGSISNIIYDHATIRCAPLRQK 348 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D + GP C+ D + + ++ + D L GAY +N Sbjct: 349 NLTCVDAKTYPTTVFGPTCDCIDIVLKDYQLPELQVNDWLVFPNMGAYTISSGTNFNGF 407 >gi|148263055|ref|YP_001229761.1| carboxynorspermidine decarboxylase [Geobacter uraniireducens Rf4] gi|146396555|gb|ABQ25188.1| carboxynorspermidine decarboxylase [Geobacter uraniireducens Rf4] Length = 384 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 68/398 (17%), Positives = 126/398 (31%), Gaps = 23/398 (5%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + ++K+ + +P Y + N + ALKA S +V + Sbjct: 3 GIDIDKILELAPSPAYVVDLGRLRHNLAILDEVQKRSGAKILLALKAFSMWSVFPIIRET 62 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+ S E R E FS K D +DL S FN ++ E Sbjct: 63 LQGVCASSPWEARLGREEFGR-EVHSFSAAFKESDVVDLLETSNHLVFNSFAQLERFRP- 120 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + RVNP+ + + G I + S + G+ Sbjct: 121 -LWEKEHGRVSVGLRVNPEHAEGHTAIYDPCAPKSRLG--IRRAEFEGRSLSGVDGLHFH 177 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + + R ++ H ++ +++GGG +H Sbjct: 178 TLCEQLF---------EPLERTARVFEEKFGEFLHGMRWLNLGGG----HHITREGYDID 224 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 L+ + ++ LEPG + GILV +V+ + ++ + + P Sbjct: 225 ALVDLVRYFREKYDIEVYLEPGEAIAIGTGILVAEVLDVVH--NEMEIAILDVSATCHMP 282 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + A + GP C GD I A + GD L Y Sbjct: 283 DILEMPYRPEIEGGFAAGEKACTYRLGGPSCLAGDVIGDWSFEAPLKAGDRLAFLDMAHY 342 Query: 375 GAVQSGTYNSRLLIPEIMVN--GSQFHIIRPRMTFQEL 410 V++ T+N + I+R T+++ Sbjct: 343 TMVKTTTFNGIHHPHICTFEPQTGELRIVRS-FTYEDF 379 >gi|289741541|gb|ADD19518.1| ornithine decarboxylase [Glossina morsitans morsitans] Length = 397 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 76/368 (20%), Positives = 147/368 (39%), Gaps = 21/368 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + T I++ Y+T+ + YA+K N++ VIKTLA LG+G D S+ E+++ Sbjct: 33 LFICDLTKIKEKYVTWQKYMPRVKP--YYAIKCNNDDLVIKTLADLGTGFDCASKNEIKQ 90 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V ERI+F+ K I A + + V++E E+ L++ Sbjct: 91 ILDIGVQGERIIFANPCKLTSHIKYARSNQVLNGTVDNEFEMYKLHKYYPQSNLIIRFRC 150 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +KFG Q S + + + G+ H+GS Sbjct: 151 EAEE----------VQCPLGEKFGCDAEQDASALMLLAKSLQLNVIGISFHVGSGCKDFP 200 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ +A + + L + G+++ +D+GGG + + + ++ ++++F + + Sbjct: 201 AYDRAINIAKKLFKFGALLGYDMNLLDIGGGFPGSSDENFKVIAAI-VNKSLNRHFPDRK 259 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT--------FVILDVAMNDFMRPTLYDAY 320 +I EPGRF VA L+ K+ + ++ + + D F + Sbjct: 260 VNVIAEPGRFFVAAAYTLICKIHAKREVRSPNNNKLLRKMYYLNDGVYGSFNCILYDHQH 319 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + + ++ I GP C+ D I + ++ GDLL GAY + Sbjct: 320 VTVEHFLDTDSYLPSFKTLIWGPTCDALDKIIEDTELPDLCCGDLLAFPNMGAYTIPIAS 379 Query: 381 TYNSRLLI 388 +N + Sbjct: 380 PFNGFMSP 387 >gi|320535387|ref|ZP_08035501.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Treponema phagedenis F0421] gi|320147789|gb|EFW39291.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Treponema phagedenis F0421] Length = 389 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 95/380 (25%), Positives = 158/380 (41%), Gaps = 22/380 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + + +QTP + I+KNYL F D + YA+KAN ++ ++K L LG+ Sbjct: 15 VLDFSEKLQTPCVIINLEKIKKNYLELKQLFP--DADIYYAMKANPHEEILKLLIGLGAN 72 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 DI S EL + L+ VP E + + K +I + G+ F +S+ +LK L + + Sbjct: 73 FDIASRYELDKILSLGVPPECLSYGNTIKKAKDIAYFYEKGVRLFATDSKEDLKNLAKYS 132 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 I + KFG + L A + + G+ Sbjct: 133 PQSRVFVRILVENTNSAD---------WPLSRKFGCHPDMAYDLCVLAKEMGLI-PYGIS 182 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS-- 254 H+GSQ I + A + L + ++ I++GGG Y + S Sbjct: 183 FHVGSQQRDIGQWDDAIAKTKYLMRSLEEEEDIKLEMINMGGGFPAPYITPTNKLSEYAR 242 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---KTFVILDVAMNDF 311 + + FGN + IILEPGR LV D G+LVT++I+I + + +V +D + + Sbjct: 243 EITRYLDDDFGNEKPHIILEPGRSLVGDSGVLVTEIITISRKNNTALHRWVYVDAGVFNG 302 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYI 368 + TL + + + GP C++ D + + K +P + GD LY Sbjct: 303 LTETLNENIKYPIFTSKDESAGKWGEVVLAGPTCDSMDIMYEDYKYTMPISLKSGDRLYF 362 Query: 369 EKTGAYGAVQSG-TYNSRLL 387 TGAY A + +N Sbjct: 363 LSTGAYTASYASVEFNGFPP 382 >gi|83951296|ref|ZP_00960028.1| decarboxylase, pyridoxal-dependent [Roseovarius nubinhibens ISM] gi|83836302|gb|EAP75599.1| decarboxylase, pyridoxal-dependent [Roseovarius nubinhibens ISM] Length = 392 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 84/376 (22%), Positives = 138/376 (36%), Gaps = 20/376 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 P I + Y + + YA+KAN +I L G+ D S Sbjct: 30 RFDRPTLVVDRGRIAQQYDALAEGLGE--ARIHYAVKANPAPEIIAMLVQRGARFDAASR 87 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GE+ L+ I F K +I A G+ F+ +S++EL+ + Q A Sbjct: 88 GEIELCLSQGAKGSDISFGNTVKRPSDIAFAQSVGVELFSADSDAELEKIAQHAPGAKVY 147 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + KFG + L YA L V I G+ H+GSQ Sbjct: 148 LRVIVENENA----------DWPLSRKFGCAPGAMAELMDYARGLD-VDIVGLSFHVGSQ 196 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + + +L R+ GH+++ +++GGG Y + P + + Sbjct: 197 TKEARHWLPVLDQVAELWHAARAAGHDMRVLNLGGGFPAHYDQSVQGPQAYAAEVMEAVR 256 Query: 264 FGNLQCKII-LEPGRFLVADVGILVTKVI-SIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 Q + + EPGR LVA+ G + +V+ +KS D + + + F Sbjct: 257 ARFGQPEYVMAEPGRGLVAEAGHIAAEVMLVSRKSPDDLHRWVYLDIGMFSGLAECAGEA 316 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQ 378 I + GP C++ D + R I LP + GD + I GAY + Sbjct: 317 IRYKIDTLRDGEETGPCVLAGPSCDSADILYEKRPIQLPLSLQSGDRVMIRNCGAYTSSY 376 Query: 379 SGT-YNSRLLIPEIMV 393 S +N E++V Sbjct: 377 SSVGFNGFP-PLEVVV 391 >gi|281206013|gb|EFA80202.1| group IV decarboxylase [Polysphondylium pallidum PN500] Length = 443 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 92/403 (22%), Positives = 168/403 (41%), Gaps = 23/403 (5%) Query: 28 PF-YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 P Y+ + G+ +M A+K+N ++K G G ++ S GEL Sbjct: 45 PLILLYNLDHFRSLAREANEQLGGIQSM---AIKSNPVMGLMKEAVRCGLGAEVASFGEL 101 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSG---IYCFNVESESELKTLNQRAVSLGKK 143 + A AA P E+I++ K+ +E++ AL G E + + + + + Sbjct: 102 KIAEAAGFPVEKIIYDSPIKSQEELEYALNLGVKLNVDNFQELDRIIAIVEKMSAEKLAT 161 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + RVNP + A ++ +STG KFGI + + T ++ V +H+GSQ Sbjct: 162 VCVGIRVNPQVAAGKYQDLSTGVPTSKFGIGMENSERIVQMYQTYKW--LNNVHLHVGSQ 219 Query: 204 IDQIESFHKAF-KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH- 261 ++ A K+ + + I+ ++GGGL + + S+ P+ S YA+ + Sbjct: 220 GFEMSQTSDAIVKVFELVEHINQLTNKQIRFFNIGGGLSVNFDSEKDTPTFSQYAAHLRE 279 Query: 262 --QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + +I E GR A G++V+KV K+S + ++ N F+R T+Y Sbjct: 280 KLPRLFSGDYVVISEFGRSYFAKSGVVVSKVEYTKQSGGRDIGVIHAGANLFIR-TIYQH 338 Query: 320 YHEINYIVNPAGDRLHIH-------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + + + ++ D+ GP C D + RK+ P D + + +G Sbjct: 339 PLWKLRVTAFSHEGQYLDGSNGSSIYDLAGPCCFAADLLVKERKLPHLNPNDFIMVHDSG 398 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGS--QFHIIRPRMTFQELIEL 413 AY YN RL P ++ +I+ T ++ I Sbjct: 399 AYMYSSYSHYNLRLAPPIYAIDSEVQNLRLIKKGETIEDKIRF 441 >gi|302868326|ref|YP_003836963.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Micromonospora aurantiaca ATCC 27029] gi|302571185|gb|ADL47387.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Micromonospora aurantiaca ATCC 27029] Length = 384 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 93/384 (24%), Positives = 157/384 (40%), Gaps = 17/384 (4%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 +A TPFY Y A+ A ++ YA+KAN A+++ LA L GLD Sbjct: 8 DIAGR--TPFYLYDFAAVRHRVAELRAALPD-GVLLHYAIKANPMPALVQRLAPLVDGLD 64 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 + S GEL AL V E+I F+G GK E+ A+ + NVES EL L + + Sbjct: 65 VASHGELLTALGTAVDREQISFAGPGKRDPELAAAIAA-GVVVNVESGDELARLRRIETA 123 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 +G+ A RVNPD + ++ G +FGI + + + Sbjct: 124 VGRSVRFALRVNPDFQL-SGSGMTMGGGATQFGIDAEAVGEVLRGPGRRGLCGLHIFAGS 182 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 + + + +R + ++ H+++GGGLGI Y + Y Sbjct: 183 --QNLRLDALTTGVSQTFELADRLVREHRLDLAHVNIGGGLGIPYFPRDEALDLAAYGRH 240 Query: 260 -----IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF--- 311 + ++LE GR+LV + G+ V++V+ K S +TF+++D M+ Sbjct: 241 LAVEVERWRRRHPDTAVVLELGRYLVGEAGVFVSRVVERKHSRGETFLVVDGGMHHHLAA 300 Query: 312 -MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + V +VGP+C D + ++ GDL+ + + Sbjct: 301 SGNFGQVVRRNYPVSAVTAKPADERETVTVVGPLCTPLDTLGRRVELPRCEVGDLVVVHQ 360 Query: 371 TGAYGAVQSG-TYNSRLLIPEIMV 393 +GAYG S + E+++ Sbjct: 361 SGAYGPTASPVHFLGHPAPVEVLL 384 >gi|308446000|ref|XP_003087071.1| hypothetical protein CRE_26049 [Caenorhabditis remanei] gi|308263085|gb|EFP07038.1| hypothetical protein CRE_26049 [Caenorhabditis remanei] Length = 318 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 148/321 (46%), Positives = 207/321 (64%), Gaps = 3/321 (0%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 AF +D +C+A+K+NSN AV+ LA LGSG DIV+ GEL R LAA A +IVFSG Sbjct: 1 MDQAFSFIDHQICFAVKSNSNLAVLNVLAKLGSGFDIVTGGELARVLAAGGDATKIVFSG 60 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 +GK +I AL+ GI CFNVES +EL + + A LGKKAPI+ RVNPD++A TH IS Sbjct: 61 LGKQEADIQKALEVGIACFNVESHAELDRIQKVAAGLGKKAPISLRVNPDVDAKTHPYIS 120 Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 TG KE+KFGIP + Y YA++LP + + G+D HIGSQ+ + + F A + + + Sbjct: 121 TGLKENKFGIPSDSVFETYQYAASLPNLDVIGIDCHIGSQLTETQPFVDALDRVIMMIAK 180 Query: 224 LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADV 283 L+ G ++HID+GGGLG+ Y + PPS ++YA+ + L K+ +EPGR + A+ Sbjct: 181 LKELGIQLKHIDIGGGLGVTYKDE-TPPSVAEYANAMRPALEKLGLKVYMEPGRSISANA 239 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G+LVTKV +K + + F I+D AMND +RP+LY A+ +I +V+ D DIVG Sbjct: 240 GVLVTKVDLLKPTNYRNFAIIDAAMNDLIRPSLYQAWMDIQAVVS-RTDVEAKTWDIVGA 298 Query: 344 ICETGDFIALNRKIALPRPGD 364 ICETGDF+ R++A + D Sbjct: 299 ICETGDFLGKERELAF-QEND 318 >gi|78221443|ref|YP_383190.1| diaminopimelate decarboxylase [Geobacter metallireducens GS-15] gi|78192698|gb|ABB30465.1| diaminopimelate decarboxylase [Geobacter metallireducens GS-15] Length = 439 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 97/425 (22%), Positives = 165/425 (38%), Gaps = 34/425 (8%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + K+A TP Y + IE + + V YA+KANS++ V++ + G Sbjct: 16 IPKIAGEWGTPIYLHDQQYIENSCDQLLAMPNAYGLHVRYAIKANSDRTVLRIVTGKGLD 75 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD S E RA AA +P R++ + E L++ I + Q Sbjct: 76 LDCSSLDEAARAHAAGIPYSRMMLTTQEVPTGEERTELEAMIKVGLKYNVC-STLQYQLI 134 Query: 138 VSLGKKAPIAFRVNPDINA---NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + I + A TG + FG+ + + ++ A A G++ + Sbjct: 135 ADFAAQNKIDLSMRVHPGAAGGGESATRDTGSEYSCFGVHLRDVPTVKALADE-KGLRFT 193 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 V +HIGS + K + + +++ + + GGGL +A + + Sbjct: 194 QVHVHIGSGG----APEKWQENIDRELGFIKTYFPDAVTVSFGGGLKVARMPGEKQADIA 249 Query: 255 DYASLIHQYFGNLQC------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + Q + + +EPG F+VA+ G +VT++I K + + F+I+D M Sbjct: 250 TLGAYAKQRIEEFKAATGRELMMEIEPGTFVVANSGHIVTRIIDKKFTNEMNFLIVDGGM 309 Query: 309 NDFMRPTLYDAYHEINY----------IVNPAGDRLHIHADIVGPICETGDFIALN---- 354 RP LY + H I + IVG CE+GD + L+ Sbjct: 310 ELLTRPLLYGSEHPIAIVRQDGTLLSSEYDQTPTAGLKPFGIVGRCCESGDSVRLDKEGN 369 Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV-NGSQFHIIRPRMTFQE 409 I P GD + I TGAY S YNS +M + +IR + ++ Sbjct: 370 IVPVMIVEPEIGDYVVIGGTGAYSESMSPENYNSHRKPGAVMRTKTGELVLIRKKQVREQ 429 Query: 410 LIELD 414 L + + Sbjct: 430 LTQNE 434 >gi|67479463|ref|XP_655113.1| ornithine decarboxylase [Entamoeba histolytica HM-1:IMSS] gi|56472227|gb|EAL49727.1| ornithine decarboxylase, putative [Entamoeba histolytica HM-1:IMSS] gi|60686955|gb|AAX35675.1| ornithine decarboxylase [Entamoeba histolytica] Length = 413 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 77/364 (21%), Positives = 130/364 (35%), Gaps = 24/364 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + T +EK + C+A+K N ++K L LG G D S E++ Sbjct: 28 FWIFDTEGVEKAVERWKKNMP--TVRPCFAVKCNPEPHLVKLLGELGCGFDCASLNEIKE 85 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L E I +S K +++ A GI V+S E++ + + A +G I Sbjct: 86 VLDLGFNPEDITYSQTFKPYNQLIEASHLGINHTIVDSIDEVQKIAKYAPKMGIMIRI-- 143 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + D +A G +D+ I + +I G+ + GV H+GS E Sbjct: 144 -MENDTSAGHVFGEKFGLHDDEVEIVLKEIKD--------KGLNLDGVHFHVGSDSHNSE 194 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 F KA R+ G ID+GGG + + I + + Sbjct: 195 VFTKALTKARNTVTLAEQFGMKPYLIDIGGGFSQVAPFEEFAATIEK---TIKELEFPER 251 Query: 269 CKIILEPGRFLVADVGI-----LVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + I EPGR++ ++ +V + D F ++ Sbjct: 252 TRFIAEPGRYMASNAFHLVSSLHGKRVRIQNGKKQIEYTSGDGLHGSFGCCIWFEKQKSC 311 Query: 324 NYIVNPAGDRLHIH-ADIVGPICETGDFIALNRKIALPRPG-DLLYIEKTGAYGAVQSGT 381 I + ++ + I GP C D +A ++ PG D L GAY + Sbjct: 312 ECITQKVNENTKMYESIIYGPSCNGSDKVATQ-ELPEMEPGKDWLLFPNMGAYTISMATN 370 Query: 382 YNSR 385 +N Sbjct: 371 FNGF 374 >gi|28901517|ref|NP_801172.1| putative diaminopimelate decarboxylase protein [Vibrio parahaemolyticus RIMD 2210633] gi|153838144|ref|ZP_01990811.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus AQ3810] gi|260363069|ref|ZP_05775938.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus K5030] gi|260880356|ref|ZP_05892711.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus AN-5034] gi|260894723|ref|ZP_05903219.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus Peru-466] gi|260900073|ref|ZP_05908468.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus AQ4037] gi|28810064|dbj|BAC63005.1| putative diaminopimelate decarboxylase protein [Vibrio parahaemolyticus RIMD 2210633] gi|149748460|gb|EDM59319.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus AQ3810] gi|308089412|gb|EFO39107.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus Peru-466] gi|308092324|gb|EFO42019.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus AN-5034] gi|308110034|gb|EFO47574.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus AQ4037] gi|308112056|gb|EFO49596.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus K5030] Length = 400 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 86/368 (23%), Positives = 150/368 (40%), Gaps = 13/368 (3%) Query: 18 LEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + LA P Y Y A+E++ + + + YA KAN + ++KTLA Sbjct: 15 VHTLAQQQNQPLCAYVYDLNALEEHIKQLRHVLPK-NVELFYAAKANPSGPILKTLAPYV 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S GEL + + ++F G GK E+ A+ + +VES +ELK + Sbjct: 74 DGFEAASGGELAHLHQQQLD-KPLIFGGPGKMPSELQQAIDLDVDAIHVESLTELKRIGA 132 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 L + A I R+N DI T K++ G K FG+ ++ + P V + G Sbjct: 133 LTERLNRPASIFLRMNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDCPQVSLKG 192 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI-DVGGGLGIAYHSDHRPPSSS 254 H+ S +E + + + + + + ++GGG+GI Y + + Sbjct: 193 FHFHLMSHQLDVERHLALMQRYFQVVKTWQQEFELGELMINLGGGMGINYQNPEQHFPWM 252 Query: 255 DYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ + + E GRF+ A G V +V+ IK++ +++VI + F Sbjct: 253 EFCDKLEFLIAKEQVQDWTLRFECGRFITAACGYYVMEVLDIKQNLGESYVIARGGTHHF 312 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIH-----ADIVGPICETGDFIALNRKIALPRPGDLL 366 P H + + + A VG +C D +A N+ +A GD + Sbjct: 313 RTPAAQSHDHPFVILKSEQHHEISHPIQHAQATFVGQLCTPKDVLARNQHVAHVDIGDYV 372 Query: 367 YIEKTGAY 374 GAY Sbjct: 373 VFTLAGAY 380 >gi|213966939|ref|ZP_03395089.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. tomato T1] gi|301385124|ref|ZP_07233542.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. tomato Max13] gi|302059679|ref|ZP_07251220.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. tomato K40] gi|302131930|ref|ZP_07257920.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928261|gb|EEB61806.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. tomato T1] Length = 402 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 82/377 (21%), Positives = 149/377 (39%), Gaps = 11/377 (2%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + Y A++++ A + YA+KANS +++TLA L SG +I S GE+ Sbjct: 25 AFIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIE- 82 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + A + VFSG GK ++ AL + + ++ES +E++ L A G+ P+ Sbjct: 83 RVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEQTGRVQPVFI 142 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+NP + A K++ FGI + + + + G +H S +E Sbjct: 143 RINPQLPAAQSSKLAMAGTATPFGIDEADLAEAVRLVDSATHLTLKGFHVHAMSHQMSVE 202 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHI--DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + Q ++ + +H+ GG + + + + + G Sbjct: 203 RHEQLLDFYLQRWQAWKALARHPEHLTHFNVGGGIGVDYLNSQQFDWQRLFCYLEKRLGE 262 Query: 267 LQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 I EPGRF+ A G V +V+ K S + F++ + F P H + Sbjct: 263 QPDSPILRFEPGRFISAYCGYYVIEVLDRKTSHGEHFLVCRGGTHQFRLPVAQSHDHPVI 322 Query: 325 YIVNPAGDR--LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA--VQSG 380 ++ + +VG +C D ++ + GDLL + GAYG + Sbjct: 323 HLPSVPPTAASPEQAYTVVGQLCTPKDVLSRRQPFKDVNIGDLLVLPMAGAYGYNISHA- 381 Query: 381 TYNSRLLIPEIMVNGSQ 397 + P+ V + Sbjct: 382 DFLCHPRPPQHFVRNGE 398 >gi|258590920|emb|CBE67215.1| putative Diaminopimelate decarboxylase [NC10 bacterium 'Dutch sediment'] Length = 435 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 72/415 (17%), Positives = 153/415 (36%), Gaps = 12/415 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKA 61 G + E +S ++A + TP YS+ + N + A + + +ALKA Sbjct: 27 LHMKGGEMWIEGLSCREMAKPLGTPLLIYSSARVRDNIAAVAAAAEASPWPVRIHFALKA 86 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 V+ L G ++++SE E A +++ +G K + ++ A+ G+ Sbjct: 87 CYLAGVVSLLQQAGLNVEVMSEYEYVLARRIGFSPNQVIVNGPAKRPEFLERAVIDGVAL 146 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 NVES SE+ L LG+ + R+NP ++ + + F +P + + Sbjct: 147 INVESLSEMTFLQGLGQRLGRIIEVGIRINPLLSQRLRGPFTPPGSKFGFDVPSGEAAAA 206 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFH---KAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + + + V H ++ + ++ A + + G Sbjct: 207 VKRIARSRSLSLQAVHCHGYTRQYRPDAHRAQVAAVVKFLRGVEADLGIRIPVLDFGGGF 266 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 G + L ++I+EPGR+LV D +T V++ K++ Sbjct: 267 GSRYLMEAHGWTFQQFMREMLDPLAGLPGDRQVIIEPGRYLVNDTAACLTSVLTCKRTVH 326 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + +V++D + + + +C + + L+ Sbjct: 327 RRWVLVDTGRHILPPRENAEYVVMP-----CQASPGRTVYHVGDFLCVPSEPVPLSVVGG 381 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH-IIRPRMTFQELIE 412 + RPGDLL + GAY + + + I+V+ ++ + + R ++ + Sbjct: 382 VMRPGDLLAVFNAGAYTFSMAQNF-GEPIPNAILVDKGEWRWLFKKRSVEEQFMR 435 >gi|312210257|emb|CBX90344.1| similar to ornithine decarboxylase [Leptosphaeria maculans] Length = 446 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 81/383 (21%), Positives = 140/383 (36%), Gaps = 36/383 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + ++ + + YA+K N + V++ + LG G D S+ E+ Sbjct: 67 FFVADLGEVYRQHMRWKKNLSRVKP--HYAVKCNPDLQVLRLMTELGMGFDCASKNEIET 124 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ KT + A QSG+ ++ EL Q I Sbjct: 125 VLKLGVDPSRIIYAQPCKTKSYVRYAAQSGVKQMTFDNADELYKTKQLFPDAELYLRIL- 183 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L + + GV H+GS + Sbjct: 184 ---------TDDSASLCRLSQKFGASLDTTAELLELAKKL-ELNVVGVAFHVGSGASDPK 233 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q + G N+ +DVGGG + + S + Sbjct: 234 AFIKAVQDARFVFDQAAALGFNMHTLDVGGGFTGDVTFE----PMAAVLSASLDEYFPPH 289 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT------FVILDVAMNDFMRPTLYDAYHE 322 ++I EPGR+ V+ + VI+ + D T + L+ + ++D H Sbjct: 290 IRVIAEPGRYYVSTAFTIACNVIARRTVTDATLGTTSYMLYLNDGVYGNFSSIIFDHQHP 349 Query: 323 INYIVNPAGD------------RLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIE 369 ++ + + I GP C+ D I+ + GD LY E Sbjct: 350 QPRVLKNGNNVLYDVRRSGYDTPSQVEYSIWGPTCDGIDIISTSCTFPELLDVGDWLYFE 409 Query: 370 KTGAYGAVQSGTYNSRLLIPEIM 392 GAY + +N E++ Sbjct: 410 DMGAYTKCSATRFNGFTDSHEVI 432 >gi|154275626|ref|XP_001538664.1| ornithine decarboxylase [Ajellomyces capsulatus NAm1] gi|150415104|gb|EDN10466.1| ornithine decarboxylase [Ajellomyces capsulatus NAm1] Length = 446 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 82/373 (21%), Positives = 138/373 (36%), Gaps = 33/373 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N + V++ +A+LG+G D S+ E+ Sbjct: 69 PFYIADLGQVYRQHVRWKKNLGRVKP--FYAVKCNPDPQVLRLMANLGNGFDCASKAEID 126 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A V RI+++ KT + A Q G+ ++ EL + + I Sbjct: 127 CALGAGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPEAELYLRIL 186 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + SL + + + GV H+GS + Sbjct: 187 ----------TDDSASLCRLSMKFGASLSITRSLLEL-AKELKLNVIGVSFHVGSGAEDP 235 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 SF KA + R + Q G +++ +DVGGG Sbjct: 236 RSFVKAVEDSRYVFDQAAEVGFDLKVLDVGGGFSEDTFERFASTLGDAL-----DEHFPP 290 Query: 268 QCKIILEPGRFLVADVGILVTKVISIK-------------KSADKTFVILDVAMNDFMRP 314 ++I EPGR+ VA L VI+ + + + + L+ + Sbjct: 291 HIRVIAEPGRYYVASAFTLAANVIARRDVSLEMSDSDSTSSATEAYMIYLNDGVYGNFSN 350 Query: 315 TLYDAYHEINYIVNPAGD-RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 ++D H + I+ I I GP C+ D I + G+ LY E G Sbjct: 351 IIFDHQHPVPQILTMESPVCTPIEYSIWGPTCDGIDLITQRITLPGALDIGNWLYFENMG 410 Query: 373 AYGAVQSGTYNSR 385 AY + +N Sbjct: 411 AYTKCSATCFNGF 423 >gi|315505294|ref|YP_004084181.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Micromonospora sp. L5] gi|315411913|gb|ADU10030.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Micromonospora sp. L5] Length = 384 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 93/384 (24%), Positives = 157/384 (40%), Gaps = 17/384 (4%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 +A TPFY Y A+ A ++ YA+KAN A+++ LA L GLD Sbjct: 8 DIAGR--TPFYLYDFAAVRHRVAELRAALPD-GVLLHYAIKANPMPALVQRLAPLVDGLD 64 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 + S GEL AL V E+I F+G GK E+ A+ + NVES EL L + + Sbjct: 65 VASHGELLTALGTAVDREQISFAGPGKRDPELAAAIAA-GVVVNVESGDELARLRRIETA 123 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 +G+ A RVNPD + ++ G +FGI + + + Sbjct: 124 VGRSVRFALRVNPDFQL-SGSGMTMGGGATQFGIDAEAVGEVLRGPGRRGLCGLHIFAGS 182 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 + + + +R + ++ H+++GGGLGI Y + Y Sbjct: 183 --QNLRLDALTTGVSQTFELADRLVREHRLDLAHVNIGGGLGIPYFPRDEALDLAAYGRH 240 Query: 260 -----IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF--- 311 + ++LE GR+LV + G+ V++V+ K S +TF+++D M+ Sbjct: 241 LAVEVEQWRRRHPDTAVVLELGRYLVGEAGVFVSRVVERKHSRGETFLVVDGGMHHHLAA 300 Query: 312 -MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + V +VGP+C D + ++ GDL+ + + Sbjct: 301 SGNFGQVVRRNYPVSAVTAKPADERETVTVVGPLCTPLDTLGRRVELPRCEVGDLVVVHQ 360 Query: 371 TGAYGAVQSG-TYNSRLLIPEIMV 393 +GAYG S + E+++ Sbjct: 361 SGAYGPTASPVHFLGHPAPVEVLL 384 >gi|256379655|ref|YP_003103315.1| Orn/DAP/Arg decarboxylase 2 [Actinosynnema mirum DSM 43827] gi|255923958|gb|ACU39469.1| Orn/DAP/Arg decarboxylase 2 [Actinosynnema mirum DSM 43827] Length = 397 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 82/379 (21%), Positives = 138/379 (36%), Gaps = 20/379 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 TP + + + A G+ + YA+KAN + V++ LA G D+ S Sbjct: 32 EQPGTPCLVIDLPTVVERFRALRAALPGVG--IFYAVKANPTREVVEVLAAEGCCFDVAS 89 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+ LA P E + +S K +I A + G+ F +SE +++T+ + A Sbjct: 90 PNEIDLCLAEGAPPEAVSYSNPIKKAADIAYAHRLGVRLFVSDSEQDVRTIAEHAPGARV 149 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I KFG L A L ++ GV H GS Sbjct: 150 MLRILVESKGST----------YPFGKKFGCAPDMAVDLLRLAGELG-LEPYGVAFHAGS 198 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 Q + A ++T +LR+ G + +++GGGL Y P + A Sbjct: 199 QQLDPTGWDAAIADAAEVTAKLRAEGVALSVVNLGGGLPAGYLEQPPPLAEYAAAMTDAV 258 Query: 263 YFGNLQCKI--ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + ++EPGR LVA+ G++ + V+ + + + Sbjct: 259 RRTFGEHAPSVMIEPGRALVAESGVIRSSVVLVARKSYSDERRWVFLDIGRYGGLAETEG 318 Query: 321 HEINYIVNPAGD-RLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKTGAYGA 376 I Y + D + GP C+ D + + + L R GD + + + GAY A Sbjct: 319 EAIAYPLRTTRDGGETGPVVLAGPTCDADDVLYQHTRYDLPLDLRAGDHVDLLRAGAYTA 378 Query: 377 VQSGT-YNSRLLIPEIMVN 394 S +N + V Sbjct: 379 SYSSVAFNGFPPLATYCVR 397 >gi|91223064|ref|ZP_01258330.1| putative diaminopimelate decarboxylase protein [Vibrio alginolyticus 12G01] gi|91191877|gb|EAS78140.1| putative diaminopimelate decarboxylase protein [Vibrio alginolyticus 12G01] Length = 400 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 85/368 (23%), Positives = 150/368 (40%), Gaps = 13/368 (3%) Query: 18 LEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + LA P Y Y +A+E++ + + + YA KAN + ++KTLA Sbjct: 15 VHTLARQQSQPLCAYVYDLSALEEHIKQLRHVLPK-NVELFYAAKANPSGPILKTLAPYV 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S GEL + + ++F G GK E+ A++ + +VES +EL+ + Sbjct: 74 DGFEAASGGELAHLHQQQLD-KPLIFGGPGKMPSELQQAIELDVDAIHVESLTELQRIGA 132 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 L + A I R+N DI T K++ G K FG+ ++ + P V + G Sbjct: 133 LTERLNRPASIFLRMNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKG 192 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI-DVGGGLGIAYHSDHRPPSSS 254 H+ S +E + + + + + + ++GGG+GI Y + + Sbjct: 193 FHFHLMSHQLDVERHLALMQRYFQVVKAWQQEFELGELMINLGGGMGINYQNPEQHFPWM 252 Query: 255 DYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ + + E GRF+ A G V +V+ IK++ + FVI + F Sbjct: 253 EFCDKLEFLIAKEQAQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHF 312 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIH-----ADIVGPICETGDFIALNRKIALPRPGDLL 366 P H + + + A VG +C D +A N+ + GD + Sbjct: 313 RTPAAQSHDHPFVILKSEQHHEISHPIQHAQATFVGQLCTPKDVLARNQHVTHVDIGDYV 372 Query: 367 YIEKTGAY 374 GAY Sbjct: 373 VFTLAGAY 380 >gi|114568958|ref|YP_755638.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Maricaulis maris MCS10] gi|114339420|gb|ABI64700.1| aspartate kinase [Maricaulis maris MCS10] Length = 857 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 94/367 (25%), Positives = 156/367 (42%), Gaps = 16/367 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y ++ G+D YA+KAN + +I+T G G++ VS E+ A Sbjct: 504 YVYDLETVKTRASAV-AGLKGLD-RGWYAMKANGHPDMIRTAVEAGLGVECVSINEVMAA 561 Query: 90 LAAPV--PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A P +RI+F+ E AL+ GI+ + + I Sbjct: 562 RKAVPDLPVDRILFTPNFAPRAEYAQALELGIHLTLDGLH-----PLRAWPEIFSGRKIT 616 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NP HK + T E KFG+ ++ A K + + Sbjct: 617 LRINPQRPEGHHKHVRTAGPEAKFGLHADELVEARDLAK-----KAGAIINGLHVHSGSG 671 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG-N 266 S ++ + + +++ +D+GGGL + S R ++ + Sbjct: 672 ISDPDHWRRVGLFLVDTARDMPDVEILDLGGGLSVDEASGVRRIDMDALDQVLTDLKTAH 731 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + ++ +EPGR++ A+ G+L+ +V +K + D FV ++ MN +RP LY A HEI + Sbjct: 732 PKYQLWIEPGRYISAESGVLLARVTQLKHTPDARFVGINTGMNSLIRPALYGARHEIVNL 791 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + ADIVGPICET D + R + GD++ I GAYG V + +YN R Sbjct: 792 TR-LDESPAYVADIVGPICETADRLGAQRLMPETEEGDIILIANGGAYGRVMASSYNMRE 850 Query: 387 LIPEIMV 393 E ++ Sbjct: 851 PAGEAVI 857 >gi|70994492|ref|XP_752025.1| ornithine decarboxylase [Aspergillus fumigatus Af293] gi|66849659|gb|EAL89987.1| ornithine decarboxylase [Aspergillus fumigatus Af293] gi|159125062|gb|EDP50179.1| ornithine decarboxylase [Aspergillus fumigatus A1163] Length = 453 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 87/375 (23%), Positives = 138/375 (36%), Gaps = 36/375 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I + +L + + YA+K N + +++ +A LG+G D S+ E+ Sbjct: 76 FYVADMGEIYRQHLRWKMNLGRVKP--FYAVKCNPDPEILRLMAKLGNGFDCASKAEIDL 133 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 AL + RI+++ KT + A + G+ ++ EL + I Sbjct: 134 ALETGIDPSRIIYAQPCKTKSYLRYAAKVGVKQMTFDNADELYKIKACYPDAELYLRIL- 192 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L +K+ GV H+GS + Sbjct: 193 ---------TDDSTSLCRLSMKFGASLDIARQLLELAHEL-ELKVVGVSFHVGSGAEDPR 242 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q GH + +DVGGG S + Sbjct: 243 AFLKAVQDARLVFDQAAEVGHELHTLDVGGGFCQDTFEKFAGILSEAL-----DTYFPPH 297 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM-------NDFMRPTLYDAYH 321 ++I EPGR+ VA L VI+ + D D M ++D H Sbjct: 298 IRVIAEPGRYYVASAFTLAANVIARRDVRDPKDPANDTYMLYLNDGVYGNFSNIIFDHQH 357 Query: 322 EINYIVNPAGD----------RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEK 370 + I+ +G+ I I GP C+ D I + L GD LY E+ Sbjct: 358 PVAKILTCSGETQPSALNAATSEGIAYSIWGPTCDGIDVITQRIVLPGLLDVGDWLYFEE 417 Query: 371 TGAYGAVQSGTYNSR 385 GAY + +N Sbjct: 418 MGAYTKCSATRFNGF 432 >gi|37524753|ref|NP_928097.1| hypothetical protein plu0752 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784178|emb|CAE13047.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 419 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 107/402 (26%), Positives = 177/402 (44%), Gaps = 14/402 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F + L + L +L + TPF+ YS I++ + YA+KAN Sbjct: 20 FVIKDDCLEIGGIPLTRLETQIGQTPFFAYSRKHIDQQVCLLRKYLPE-KISIHYAIKAN 78 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 +I L+ G D+ S E+ AL V E I F+G GKT E+ A+ + Sbjct: 79 PFVPLIHHLSQKIEGFDVASANEMALALNTGVSPEDISFAGPGKTDTELKRAIAA-QVLL 137 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NVES +EL+ + + LG A ++ R+NPD N N+ G ++ +L Sbjct: 138 NVESLNELRRIQILSEKLGLCARVSLRINPDYNLNSSGMKMGGGPRQFGMDVVYVPEALM 197 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI-QHIDVGGGLG 241 + G ++ GSQ E +A +L +L + + + ++GGG G Sbjct: 198 FIRDYPDSLVFEGFQIYPGSQNLCAEHLIEAQNKALNLVIELSHSAPSPVRRFNLGGGFG 257 Query: 242 IAYHSDHRPPSSSDYASLIHQY-----FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 + Y + + ++ + +H+ + +IILE GR+LVA GI VTK++ K S Sbjct: 258 VPYFQGNTELNITEVGNAMHKLVERAEKFLPEVEIILELGRYLVASSGIYVTKIVERKIS 317 Query: 297 ADKTFVILDVAMNDFMRPT----LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 D TF++ D MN + + + I N +IVGP+C D + Sbjct: 318 HDMTFLVTDGGMNHHLSASGNLGQLIRRNYPAIIGNKIKGEKRETVNIVGPLCTPLDILV 377 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMV 393 +++ PGDL+ I ++GAYG S + S+ E++V Sbjct: 378 HQGDMSVATPGDLVVIFQSGAYGLSASPNNFLSQTNAVEVLV 419 >gi|75303413|sp|Q8S3N2|DCOR_CAPAN RecName: Full=Ornithine decarboxylase; Short=ODC; AltName: Full=CaODC1; AltName: Full=CapODC gi|19387300|gb|AAL87201.1|AF480882_1 ornithine decarboxylase [Capsicum annuum] Length = 435 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 68/372 (18%), Positives = 122/372 (32%), Gaps = 21/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + ++ A + YA+K N + + LA +GS S E+ Sbjct: 68 PFYVLDLGEVVSLMDQWNVALP--NVRPFYAVKCNPEPSFLSMLAAMGSNFVCASRAEIE 125 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + ERIVF+ K +I A + G+ +SE E+ + + I Sbjct: 126 YVLSLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPKCELLLRI- 184 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + + + + + +SGV HIGS Sbjct: 185 ---------KPMNDGNARCPMGPKYGALPEEIEPLLRIAQASRLTVSGVSFHIGSGDADS 235 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ A + + + G + ++ GG + H ++ A H + Sbjct: 236 NAYLGAIAAAKQVFETAAKFGMSKMNVLDIGGGFTSGHQFTTAATAVKSALQQH-FSNEP 294 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + II EPGRF L T +I + D ++ + M LYD + Sbjct: 295 ELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYWINDGLYGSMNCVLYDHATVTATPL 354 Query: 328 NPAGDR--------LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +R + I GP C+ D + + + + D + GAY Sbjct: 355 ACMSNRVNLNCSGSKMFPSTIFGPTCDALDTVLRDYHVPELQVNDWVIFPNMGAYTKAAG 414 Query: 380 GTYNSRLLIPEI 391 +N + Sbjct: 415 SNFNGFNTSAIV 426 >gi|169601550|ref|XP_001794197.1| hypothetical protein SNOG_03643 [Phaeosphaeria nodorum SN15] gi|5921568|emb|CAB56523.1| ornithine decarboxylase [Phaeosphaeria nodorum] gi|160705959|gb|EAT88848.2| hypothetical protein SNOG_03643 [Phaeosphaeria nodorum SN15] Length = 445 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 81/376 (21%), Positives = 139/376 (36%), Gaps = 36/376 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L + + YA+K N + V++ ++ LG G D S+ E+ Sbjct: 66 FFIADLGEVYRQHLRWKKNLARVKP--HYAVKCNPDTQVLRLMSELGMGFDCASKNEIET 123 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ KT + A SG+ ++ EL Q I Sbjct: 124 VLKLGVDPARIIYAQPCKTKSYVRYAANSGVKQMTFDNADELYKTKQLFPDAELYLRIL- 182 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L + + GV H+GS + Sbjct: 183 ---------TDDSGSLCRLSQKFGASLDTTAELLELAHKLE-LNVVGVAFHVGSGASDPK 232 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q + G ++ +DVGGG + + S + Sbjct: 233 AFIKAVQDARFVFDQAAAFGFDMHTLDVGGGFTGDITFE----PMAAVLSASLDEYFPPH 288 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT------FVILDVAMNDFMRPTLYDAYHE 322 ++I EPGR+ V+ + VI+ + AD T + L+ + ++D H Sbjct: 289 IRVIGEPGRYYVSTAFTIACHVIARRTVADATLGTTSYMLYLNDGVYGNFSSIIFDHQHP 348 Query: 323 INYIVNPAGD------------RLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIE 369 + ++ D + I GP C+ D I+ + GD LY E Sbjct: 349 VPRVLKSGNDVLYDVRTSGYDTPSQVEYSIWGPTCDGIDIISSSCSFPELLDVGDWLYFE 408 Query: 370 KTGAYGAVQSGTYNSR 385 GAY + +N Sbjct: 409 DMGAYTKCSATKFNGF 424 >gi|195972769|dbj|BAG68504.1| ornithine decarboxylase [Aspergillus oryzae] Length = 447 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 85/370 (22%), Positives = 139/370 (37%), Gaps = 31/370 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + +L + YA+K N + +++ +A LG+G D S+ E+ Sbjct: 75 FYVADMGEVYRQHLRWKMNLSR--VRPFYAVKCNPDPEILRLMAKLGNGFDCASKAEIDM 132 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 AL + RI+++ KT + A Q G+ ++ EL + I Sbjct: 133 ALDTGIDPSRIIYAQPCKTKSYLRYAAQMGVKQMTFDNADELYKIKACFPDAELYLRIL- 191 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L +K+ GV H+GS + Sbjct: 192 ---------TDDSTSLCRLSMKFGASLDIARQLLELAHEL-ELKVVGVSFHVGSGAEDPT 241 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q GH + +DVGGG S + Sbjct: 242 AFVKAVQDARMVFDQAAEIGHELHTLDVGGGFSGDTFEKFAGVLSEAL-----DTYFPPH 296 Query: 269 CKIILEPGRFLVADVGILVTKVISIK-------KSADKTFVILDVAMNDFMRPTLYDAYH 321 ++I EPGR+ VA L VI+ + + D + L+ + ++D H Sbjct: 297 IRVIAEPGRYYVATAFTLAANVIARRDVRDPEDPANDAYMIYLNDGVYGNFSNIIFDHQH 356 Query: 322 EINYIVNPAGDRLH-----IHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYG 375 + I+ A I I GP C+ D I+ + L GD L+ E+ GAY Sbjct: 357 PVAQILTCANASNAATSAGIAYSIWGPTCDGIDVISQRITLPGLLDVGDWLFFEEMGAYT 416 Query: 376 AVQSGTYNSR 385 + +N Sbjct: 417 KCSATRFNGF 426 >gi|220928558|ref|YP_002505467.1| carboxynorspermidine decarboxylase [Clostridium cellulolyticum H10] gi|219998886|gb|ACL75487.1| carboxynorspermidine decarboxylase [Clostridium cellulolyticum H10] Length = 382 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 59/396 (14%), Positives = 126/396 (31%), Gaps = 24/396 (6%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 ++ ++ L TP Y + KN + + A K S +V + Sbjct: 6 DIDIKSL----PTPCYIVDERLLIKNLEILDSVQKRTGCKILLAQKGFSMHSVYPLVGKY 61 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 +G+ S E + + E +++ + ++ S S + Sbjct: 62 LAGVTSSSLFEAKLGYE-KMGKEVHIYAPAYIEEEFDEIMKYSDH--IVFNSFHQWNKYK 118 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + KK R+NP+ + H K + G+ + Sbjct: 119 DKVRTSTKKISFGIRINPEYSELEHPIYDPCYKFSRLGVTLPNFKPEGLDGI-------- 170 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + ++ + ++ + ++ +++ ++ GGG I Sbjct: 171 ---EGLHFHTMCEQNSDTLERTIKVVDEKFGRYIKDMKWLNFGGGHHITRPD----YDME 223 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 I+ + + LEPG + + G LV KV+ I ++ + + P Sbjct: 224 ALVRSINYFQDKYGVSVYLEPGEAVALNTGYLVAKVLDIV--ENEMNIAILDTSAACHMP 281 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + N I D + G C GD I + +PGD L Y Sbjct: 282 DVIEMPYRPNIIGAGKPDENPHTYRLGGHTCLAGDIIGDYSFVQNLKPGDRLVFCDMAHY 341 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 V++ T+N L + N + I + +++ Sbjct: 342 TMVKNNTFNGVNLPAIALYNEKEGIRIIKQFGYEDF 377 >gi|256396113|ref|YP_003117677.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Catenulispora acidiphila DSM 44928] gi|256362339|gb|ACU75836.1| pyridoxal-dependent decarboxylase, exosortase system type 1 associated [Catenulispora acidiphila DSM 44928] Length = 408 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 107/402 (26%), Positives = 170/402 (42%), Gaps = 16/402 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F G+L V +E+LA V TPF+ Y + +A + YA+KAN Sbjct: 11 FGRAGGALAVGGVPVERLAARVGATPFFAYDRGLLADRLAAVRHALP-AGVHLSYAVKAN 69 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 A++ L+ L G D+ S ELR AL PV E++ F+G GKT+ EI A+ SG+ Sbjct: 70 PMPALLHHLSALVDGFDVASGLELRAALDTPVRPEKVSFAGPGKTVAEIRQAVASGVT-V 128 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 +ESE EL + A +G A +A RVNPD G + +FG+ ++ L Sbjct: 129 ELESELELTRVRAAAAEIGVAARVAVRVNPDFAVRGSGMRLGGGPQ-QFGVDSERVPDLL 187 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 ++ G + GSQ + E +A + DL L + + GG Sbjct: 188 R-LMAGEDLEFQGFHIFAGSQNLRAEEICEAQRRTVDLVVALAEHAPSPVRYVNVGGGFG 246 Query: 243 AYHSDHRP-----PSSSDYASLIHQYFGNLQCKIIL-EPGRFLVADVGILVTKVISIKKS 296 ++ P + A L L I E GR+LV + G+ VT+V+ K+S Sbjct: 247 IPYTARDTALDLAPIGENLAKLTDVVAAALPGARIAVELGRYLVGEAGVYVTRVLDRKES 306 Query: 297 ADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K F+++D ++ + + N + +VG +C D + Sbjct: 307 RGKVFLVVDGGLHHQLAASGNFGQTIRRNYPLAVANRIDETAAGKVSVVGCLCTPLDLLG 366 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 + + GDL+ + + GAYG S T + S E++V Sbjct: 367 DDVDLPAADVGDLIVLFQAGAYGLTASPTAFLSHPAPVEVLV 408 >gi|169773617|ref|XP_001821277.1| ornithine decarboxylase [Aspergillus oryzae RIB40] gi|238491624|ref|XP_002377049.1| ornithine decarboxylase [Aspergillus flavus NRRL3357] gi|83769138|dbj|BAE59275.1| unnamed protein product [Aspergillus oryzae] gi|220697462|gb|EED53803.1| ornithine decarboxylase [Aspergillus flavus NRRL3357] Length = 449 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 85/370 (22%), Positives = 139/370 (37%), Gaps = 31/370 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + +L + YA+K N + +++ +A LG+G D S+ E+ Sbjct: 77 FYVADMGEVYRQHLRWKMNLSR--VRPFYAVKCNPDPEILRLMAKLGNGFDCASKAEIDM 134 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 AL + RI+++ KT + A Q G+ ++ EL + I Sbjct: 135 ALDTGIDPSRIIYAQPCKTKSYLRYAAQMGVKQMTFDNADELYKIKACFPDAELYLRIL- 193 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L +K+ GV H+GS + Sbjct: 194 ---------TDDSTSLCRLSMKFGASLDIARQLLELAHEL-ELKVVGVSFHVGSGAEDPT 243 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q GH + +DVGGG S + Sbjct: 244 AFVKAVQDARMVFDQAAEIGHELHTLDVGGGFSGDTFEKFAGVLSEAL-----DTYFPPH 298 Query: 269 CKIILEPGRFLVADVGILVTKVISIK-------KSADKTFVILDVAMNDFMRPTLYDAYH 321 ++I EPGR+ VA L VI+ + + D + L+ + ++D H Sbjct: 299 IRVIAEPGRYYVATAFTLAANVIARRDVRDPEDPANDAYMIYLNDGVYGNFSNIIFDHQH 358 Query: 322 EINYIVNPAGDRLH-----IHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYG 375 + I+ A I I GP C+ D I+ + L GD L+ E+ GAY Sbjct: 359 PVAQILTCANASNAATSAGIAYSIWGPTCDGIDVISQRITLPGLLDVGDWLFFEEMGAYT 418 Query: 376 AVQSGTYNSR 385 + +N Sbjct: 419 KCSATRFNGF 428 >gi|294813014|ref|ZP_06771657.1| Lysine/ornithine decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294325613|gb|EFG07256.1| Lysine/ornithine decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 437 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 94/399 (23%), Positives = 158/399 (39%), Gaps = 17/399 (4%) Query: 31 CYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 I+ + AF G+ + +A+KA V+ L G G ++ S GEL Sbjct: 28 LLDVAGIKASATALKEAFAGVTEAPVLHAFAVKAAPLVPVVALLNGEGIGAEVASPGELA 87 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A AA VPA R V KT+ E+ AL GI + + A + G ++P+ Sbjct: 88 IARAAGVPAARTVLDSPAKTVRELREALDLGIALNADNPQELSRIDALLAETDGVRSPVG 147 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA-STLPGVKISGVDMHIGSQIDQ 206 R+N + A +ST KFG+ + + A L ++ + H GSQ Sbjct: 148 VRINAQVGAGAIGALSTATATSKFGVALRDPGARAAVVRMFLDRPWLTRLHTHSGSQGVP 207 Query: 207 IESFHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + + + L L +++ + I +D+GGGL + + SD P+ ++YA+L+ + Sbjct: 208 LARMTEGVRELYALAEEINAAAGRRQIDTLDIGGGLPVNFASDETTPTFAEYAALLKREV 267 Query: 265 G---NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + + ++ E GR L+A G ++ +V K S + + + R Sbjct: 268 PGLLDGRYALVTEYGRALLAKHGTILARVEYTKVSGGRPIAVTHAGVQVATRTVYDPVSW 327 Query: 322 EINYIVNPAGDRLH----IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + + DI GP C GD +A R++ GD++ TGAY Sbjct: 328 PLRIAAYGPDGHPKTGAPVPQDIAGPACFAGDLLAEARELPPLDQGDVVAALDTGAYCFS 387 Query: 378 QSGTYNSRLLIPEIMVNGS----QFHIIRPRMTFQELIE 412 YNS F ++R T EL+ Sbjct: 388 NHYGYNSLPRPGVYGYTADATAVDFRLVRAPQTEAELVA 426 >gi|260460667|ref|ZP_05808918.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075] gi|259033772|gb|EEW35032.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075] Length = 377 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 93/373 (24%), Positives = 149/373 (39%), Gaps = 21/373 (5%) Query: 21 LAHVVQT-PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA T P + N+ F A D+ + YA+KAN +++ LA +GS D Sbjct: 10 LATRRPTGPCLVVDLDVVRDNFRAFEKALP--DSRIYYAVKANPAPEILRLLAAMGSSFD 67 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S E+ A+ A PA+RI F K +I A Q GI F V+ E++ + + A Sbjct: 68 TASVAEVEMAMDAGAPADRISFGNTIKKERDIARAYQLGIRLFAVDCVEEVEKVARVAPG 127 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + T + + KFG + +A L + GV H Sbjct: 128 SRVFCRVL----------TDGEGAEWPLSRKFGCVPAMAVDVLRHAKGLG-LDAYGVSFH 176 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 +GSQ + ++ +A + + + L G ++ +++GGG Y D + A Sbjct: 177 VGSQQTDLTAWDRALRDAKTVFATLAEEGIVLKMVNMGGGFPTRYLRDVPAAQAYGQAIF 236 Query: 260 I--HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 ++FGN + I+EPGR +V + G++ ++V+ I K AD V Sbjct: 237 SALRKHFGNAIPETIIEPGRGMVGNAGVIKSEVVLISKKADNDNVRWVFLDIGKFGGLAE 296 Query: 318 DAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGA 373 I Y + D + GP C++ D + LP GD + IE TGA Sbjct: 297 TMDEAIRYPIVTRHDGTETAPCVLAGPTCDSADVMYEKTPYPLPLSLTIGDEVLIEGTGA 356 Query: 374 YGAVQSGT-YNSR 385 Y S +N Sbjct: 357 YTTTYSAVAFNGF 369 >gi|326441439|ref|ZP_08216173.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 413 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 94/399 (23%), Positives = 158/399 (39%), Gaps = 17/399 (4%) Query: 31 CYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 I+ + AF G+ + +A+KA V+ L G G ++ S GEL Sbjct: 4 LLDVAGIKASATALKEAFAGVTEAPVLHAFAVKAAPLVPVVALLNGEGIGAEVASPGELA 63 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A AA VPA R V KT+ E+ AL GI + + A + G ++P+ Sbjct: 64 IARAAGVPAARTVLDSPAKTVRELREALDLGIALNADNPQELSRIDALLAETDGVRSPVG 123 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA-STLPGVKISGVDMHIGSQIDQ 206 R+N + A +ST KFG+ + + A L ++ + H GSQ Sbjct: 124 VRINAQVGAGAIGALSTATATSKFGVALRDPGARAAVVRMFLDRPWLTRLHTHSGSQGVP 183 Query: 207 IESFHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + + + L L +++ + I +D+GGGL + + SD P+ ++YA+L+ + Sbjct: 184 LARMTEGVRELYALAEEINAAAGRRQIDTLDIGGGLPVNFASDETTPTFAEYAALLKREV 243 Query: 265 G---NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + + ++ E GR L+A G ++ +V K S + + + R Sbjct: 244 PGLLDGRYALVTEYGRALLAKHGTILARVEYTKVSGGRPIAVTHAGVQVATRTVYDPVSW 303 Query: 322 EINYIVNPAGDRLH----IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + + DI GP C GD +A R++ GD++ TGAY Sbjct: 304 PLRIAAYGPDGHPKTGAPVPQDIAGPACFAGDLLAEARELPPLDQGDVVAALDTGAYCFS 363 Query: 378 QSGTYNSRLLIPEIMVNGS----QFHIIRPRMTFQELIE 412 YNS F ++R T EL+ Sbjct: 364 NHYGYNSLPRPGVYGYTADATAVDFRLVRAPQTEAELVA 402 >gi|254392330|ref|ZP_05007514.1| lysine/ornithine decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|197706001|gb|EDY51813.1| lysine/ornithine decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 448 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 94/399 (23%), Positives = 158/399 (39%), Gaps = 17/399 (4%) Query: 31 CYSTTAIEKNYLTFSNAFDGM---DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 I+ + AF G+ + +A+KA V+ L G G ++ S GEL Sbjct: 39 LLDVAGIKASATALKEAFAGVTEAPVLHAFAVKAAPLVPVVALLNGEGIGAEVASPGELA 98 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A AA VPA R V KT+ E+ AL GI + + A + G ++P+ Sbjct: 99 IARAAGVPAARTVLDSPAKTVRELREALDLGIALNADNPQELSRIDALLAETDGVRSPVG 158 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA-STLPGVKISGVDMHIGSQIDQ 206 R+N + A +ST KFG+ + + A L ++ + H GSQ Sbjct: 159 VRINAQVGAGAIGALSTATATSKFGVALRDPGARAAVVRMFLDRPWLTRLHTHSGSQGVP 218 Query: 207 IESFHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + + + L L +++ + I +D+GGGL + + SD P+ ++YA+L+ + Sbjct: 219 LARMTEGVRELYALAEEINAAAGRRQIDTLDIGGGLPVNFASDETTPTFAEYAALLKREV 278 Query: 265 G---NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + + ++ E GR L+A G ++ +V K S + + + R Sbjct: 279 PGLLDGRYALVTEYGRALLAKHGTILARVEYTKVSGGRPIAVTHAGVQVATRTVYDPVSW 338 Query: 322 EINYIVNPAGDRLH----IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + + DI GP C GD +A R++ GD++ TGAY Sbjct: 339 PLRIAAYGPDGHPKTGAPVPQDIAGPACFAGDLLAEARELPPLDQGDVVAALDTGAYCFS 398 Query: 378 QSGTYNSRLLIPEIMVNGS----QFHIIRPRMTFQELIE 412 YNS F ++R T EL+ Sbjct: 399 NHYGYNSLPRPGVYGYTADATAVDFRLVRAPQTEAELVA 437 >gi|255730323|ref|XP_002550086.1| ornithine decarboxylase [Candida tropicalis MYA-3404] gi|240132043|gb|EER31601.1| ornithine decarboxylase [Candida tropicalis MYA-3404] Length = 462 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 78/376 (20%), Positives = 148/376 (39%), Gaps = 32/376 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I+K+ ++ + YA+K NSN V++TL LG D S+ E+ Sbjct: 84 FFICDLGEIKKSVEIWNKSLPS--VQPHYAVKCNSNLKVLQTLYSLGVNFDCASKQEIDL 141 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ + ++I+++ KT I A + V++ EL +++ + Sbjct: 142 ILSMAIQPDKIIYANPCKTNSFIRHANSQDVNLTTVDNVHELYKISKFHPGCKILIRLI- 200 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + + + G+ + GV H+GS Sbjct: 201 ---------TDDSTAQCQLSTKFGCDLSIAINEILPIAKELGLNVHGVAFHVGSGAKDFT 251 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQYFGNL 267 S ++A K + L +++ G Q +D+GGG ++ + +Y N Sbjct: 252 SIYQAIKDSKTLFEKMFEFGFTPQLLDIGGGFERGTFNESSKMVNFALEKYFPLEYTTNH 311 Query: 268 QCKIILEPGRFLVADVGILVTK-------------VISIKKSADKTFVILDVAMNDFMRP 314 K I EPGRF+VA+ L+T V ++ D + L+ + D P Sbjct: 312 GIKFIAEPGRFMVANAFTLITHVIARRDLAENENDVKAMLYINDGVYGNLNCILFDHQNP 371 Query: 315 TLYDAYHEINYIVNP-----AGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYI 368 +Y ++ + ++ + + GP C+ D ++ +++ GD L+ Sbjct: 372 KVYVLTNKNQLYYKQELLEKSQNQKGFNYSVWGPTCDGLDCVSSFVQLSKNIEVGDWLFF 431 Query: 369 EKTGAYGAVQSGTYNS 384 E GAY + S +N Sbjct: 432 ENVGAYTSCASTRFNG 447 >gi|320582680|gb|EFW96897.1| Ornithine decarboxylase [Pichia angusta DL-1] Length = 433 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 75/377 (19%), Positives = 141/377 (37%), Gaps = 33/377 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF+ +++ + ++ YA+K N+++ ++ TL +G G D S+ E++ Sbjct: 58 PFFVCDLGELKRLVRLWRAEMPRVEP--LYAVKCNNDEKLLHTLLQMGLGFDCASKTEIQ 115 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + L+ +I+++ K + + A Q+G+ V+S E++ + G I Sbjct: 116 QMLSLGADPAKIIYANPCKAVPHVRYARQNGVNLTTVDSVDEVRKIAAHHPDCGLLIRI- 174 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 +T +T KFG + + L + L + + GV H+GS Sbjct: 175 ---------HTDDADATCPLSIKFGASLQEARILVQECAKLK-LNLKGVAFHVGSGCKNF 224 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + A + R + S G+ ++ +D+GGG A S + Sbjct: 225 NTIETAVRDSRMVFDYAESLGYTLKMLDIGGGFSKATFHASAAVFRSALDTHFAAEEFPD 284 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA-------- 319 E GRFL A L V S + A + + ++ + + L+D Sbjct: 285 LYIF-SELGRFLAASCFTLAVNVTSKRSDAFQERIYVNDGVYGNLNCILFDHQEVEPKVL 343 Query: 320 --YHEINYIVNPAGDRLH--------IHADIVGPICETGDFIALNRKI-ALPRPGDLLYI 368 + + N + GP C+ D I+ N K+ GD LY Sbjct: 344 TSHGRFVFHSNYNHPEKELAAAANPFKQYSVWGPTCDGLDCISPNCKLSQEVVAGDWLYF 403 Query: 369 EKTGAYGAVQSGTYNSR 385 + TGAY + + +N Sbjct: 404 KDTGAYTSAAATNFNGF 420 >gi|313637136|gb|EFS02677.1| diaminopimelate decarboxylase [Listeria seeligeri FSL S4-171] Length = 293 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 128/281 (45%), Gaps = 13/281 (4%) Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS---LYAYASTLPGVKISGVDMHIGS 202 + RV P I A+TH I TG+ + KFG + + + + G+ HIGS Sbjct: 11 VLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEAAIKQVLHASAAFDLIGLHCHIGS 70 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI- 260 QI + F A + + D + G + + +++GGG G+ Y ++ P S+Y I Sbjct: 71 QIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIM 130 Query: 261 ------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-KTFVILDVAMNDFMR 313 +I +EPGR LV + G + KV S K+ + +V +D M+D +R Sbjct: 131 EEVRDVANANDIAIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYVAVDGGMSDNIR 190 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P LYDA+++ NP I G CE+GD + + + G++L + TGA Sbjct: 191 PALYDAHYDAVLAANPE-KVPEETVAIAGKCCESGDMLIWDLPLPKSNAGEILAVFCTGA 249 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 YG + YN P + V ++ R T++ L++ D Sbjct: 250 YGYAMASNYNRIPRPPVVFVEDGVDKLVVARETYENLVQND 290 >gi|23307119|dbj|BAC16548.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus] Length = 400 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 86/368 (23%), Positives = 149/368 (40%), Gaps = 13/368 (3%) Query: 18 LEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + LA P Y Y A+E++ + + + YA KAN + ++ TLA Sbjct: 15 VHTLAQQQNQPLCAYLYDLNALEEHIKQLRHVLPK-NVKLFYAAKANPSGPILNTLAPYV 73 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S GEL + + ++F G GK E+ A++ + +VES +EL+ + Sbjct: 74 DGFEAASGGELTHLHQQQLD-KPLIFGGPGKMPSELQQAIELDVDAIHVESLTELQRIGA 132 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 L + A I R+N DI T K++ G K FG+ ++ + P V + G Sbjct: 133 LTERLNRPASIFLRMNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKG 192 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI-DVGGGLGIAYHSDHRPPSSS 254 H+ S +E + + + + + + ++GGG+GI Y + + Sbjct: 193 FHFHLMSHQLDVERHLALMQRYFQVVKAWQQEFELGELMINLGGGMGINYQNPEQHFPWM 252 Query: 255 DYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ + + E GRF+ A G V +V+ IK++ + FVI + F Sbjct: 253 EFCDKLEFLIAKEQVQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHF 312 Query: 312 MRPTLYDAYHEIN-----YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 P H + + H A VG +C D +A N+ +A GD + Sbjct: 313 RTPAAQSHDHPFVILKSEQHHDISHPIQHAQATFVGQLCTPKDVLARNQHVAHVDIGDYV 372 Query: 367 YIEKTGAY 374 GAY Sbjct: 373 VFTLAGAY 380 >gi|119500932|ref|XP_001267223.1| ornithine decarboxylase [Neosartorya fischeri NRRL 181] gi|119415388|gb|EAW25326.1| ornithine decarboxylase [Neosartorya fischeri NRRL 181] Length = 453 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 87/375 (23%), Positives = 138/375 (36%), Gaps = 36/375 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I + +L + + YA+K N + +++ +A LG+G D S+ E+ Sbjct: 76 FYVADMGEIYRQHLRWKMNLGRVKP--FYAVKCNPDPEILRLMAKLGNGFDCASKAEIDL 133 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 AL + RI+++ KT + A + G+ ++ EL + I Sbjct: 134 ALETGIDPSRIIYAQPCKTKSYLRYAAKVGVKQMTFDNADELYKIKACYPDAELYLRIL- 192 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L +K+ GV H+GS + Sbjct: 193 ---------TDDSTSLCRLSMKFGASLDIARQLLELAHEL-ELKVVGVSFHVGSGAEDPR 242 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q GH + +DVGGG S + Sbjct: 243 AFLKAVQDARLVFDQAAEVGHELHTLDVGGGFCQDTFEKFAGILSEAL-----DTYFPPH 297 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM-------NDFMRPTLYDAYH 321 ++I EPGR+ VA L VI+ + D D M ++D H Sbjct: 298 IRVIAEPGRYYVASAFTLAANVIARRDVRDPEDPANDAYMLYLNDGVYGNFSNIIFDHQH 357 Query: 322 EINYIVNPAGD----------RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEK 370 + I+ +G+ I I GP C+ D I + L GD LY E+ Sbjct: 358 PVAKILTCSGETQPSALNAATSEGIAYSIWGPTCDGIDVITQRIVLPGLLDVGDWLYFEE 417 Query: 371 TGAYGAVQSGTYNSR 385 GAY + +N Sbjct: 418 MGAYTKCSATRFNGF 432 >gi|258578139|ref|XP_002543251.1| ornithine decarboxylase [Uncinocarpus reesii 1704] gi|237903517|gb|EEP77918.1| ornithine decarboxylase [Uncinocarpus reesii 1704] Length = 446 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 87/374 (23%), Positives = 143/374 (38%), Gaps = 34/374 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY I + ++ + + YA+K N + V++ +AHLG+G D S+ E+ Sbjct: 70 PFYVADLGEIYRQHVRWKMNLGRVKP--FYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 127 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A V RI+++ KT + A Q G+ ++ EL + I Sbjct: 128 YALDAGVDPSRIIYAHPCKTKSYLRYAAQQGVKQMTFDNADELYKIKAMCPDAELFLRIL 187 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + SL A L + + GV H+GS + Sbjct: 188 ----------TDDSASLCRLSMKFGASLTVTRSLLELAKELD-LNVVGVSFHVGSGAEDP 236 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++F KA + R + Q GH+++ +DVGGG S + Sbjct: 237 KAFVKAVEDARFVFDQASDIGHDLKVLDVGGGFCDETFEHFAAALSDAL-----DTYFPP 291 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKK-------------SADKTFVILDVAMNDFMRP 314 ++I EPGR+ VA L VI+ + A+ + L+ + Sbjct: 292 HIRVIAEPGRYYVASAFTLAANVIARRDVSPSASDSDSSTGPAEMYMIYLNDGVYGNFSN 351 Query: 315 TLYDAYHEINYIVNPAGDRLHIH--ADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKT 371 ++D H + I+ I GP C+ D I+ + + G+ LY E Sbjct: 352 IVFDHQHPVAQILTKDDITSTHPVEYSIWGPTCDGIDVISERITLNGVLGVGNWLYFENM 411 Query: 372 GAYGAVQSGTYNSR 385 GAY + +N Sbjct: 412 GAYTRCSATRFNGF 425 >gi|119499648|ref|XP_001266581.1| ornithine decarboxylase [Neosartorya fischeri NRRL 181] gi|119414746|gb|EAW24684.1| ornithine decarboxylase [Neosartorya fischeri NRRL 181] Length = 443 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 79/374 (21%), Positives = 139/374 (37%), Gaps = 34/374 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF+ I + + + + + YA+K N + +++ LA LG+G D S ELR Sbjct: 49 PFFVADLGQILRQHRRWQSNLP--NVHPFYAVKCNPDPTLLRLLAELGTGFDCASTEELR 106 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L V RI+F+ K+ + A ++G+ ++ EL+T+ + I Sbjct: 107 VVLNLGVDPSRIIFANPCKSASSLLFAARTGVTLTTFDNLDELETIQTFLPTARLMLRIY 166 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + K +KFG PI L A L +++ GV H+G+ + Sbjct: 167 ----------ACDDDALIKLGEKFGAPIKSSFVLLQRAQELG-LEVCGVSFHVGTGASNV 215 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ A + + + +S G+++ +D+GGG + Sbjct: 216 SAYVNAIRHAHMVFELGKSLGYDMDLLDIGGGYQDSNFEKIAQSIRGTL-----MEAFPS 270 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKS---------------ADKTFVILDVAMNDFM 312 + +II EPGR+ LV K++S + ++V + Sbjct: 271 RTQIIAEPGRYYARSAYTLVCKILSRRCHIAEAAQDRPDMLYQNDGVYGSFMNVLFEKEV 330 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI-ALPRPGDLLYIEKT 371 ++ N R H I GP C++ D +A + A R GD L Sbjct: 331 VHPSLIPCSSPYHLRNTKRVRGPHHYSIWGPTCDSVDCVARESTLEAEVRVGDWLKYSNM 390 Query: 372 GAYGAVQSGTYNSR 385 GAY S +N Sbjct: 391 GAYTMATSTQFNGF 404 >gi|319899290|ref|YP_004159385.1| lysine/ornithine decarboxylase [Bartonella clarridgeiae 73] gi|319403256|emb|CBI76815.1| lysine/ornithine decarboxylase [Bartonella clarridgeiae 73] Length = 453 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 89/365 (24%), Positives = 143/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + +NYL F A + YA+KAN +++ L LGS D S E+ Sbjct: 94 PCLVVDLDVVHENYLNFKKALPQS--RIFYAIKANPAPEILRLLVSLGSSFDAASIAEIE 151 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A A+RI F K +I A G+ + V+ E++ + A + Sbjct: 152 MALKAGATADRISFGNTIKKERDIARAHALGVSLYAVDCLEEVEKVA----CAAPGARVF 207 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RV D KFG + +A L ++ GV H+GSQ + Sbjct: 208 CRVLTDGEGAEWP------LSQKFGCVPFMAVDVLRHAHQLG-LQAYGVSFHVGSQQTDL 260 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 ++ +A + + L G ++ +++GGG Y D + A +YFG Sbjct: 261 NAWDRALSDTAFVFKSLEQEGIQLKLVNMGGGFPTRYLKDIPTVQTYGMAIFDSLKKYFG 320 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKS-ADKTFVILDVAMNDFMRPTLYDAYHEIN 324 N + I+EPGR +V + G++ T+V+ I K D + + + F T Sbjct: 321 NRIPETIIEPGRAMVGNAGVIRTEVVLISKKAKDDNIRWVYLDVGKFNGLTETMDEAIRY 380 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 I D+ + GP C++ D + + L GD L I TGAY + Sbjct: 381 PIETAYDDKAMEPCILAGPTCDSADVMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASV 440 Query: 382 -YNSR 385 +N Sbjct: 441 AFNGF 445 >gi|303325885|ref|ZP_07356328.1| diaminopimelate decarboxylase [Desulfovibrio sp. 3_1_syn3] gi|302863801|gb|EFL86732.1| diaminopimelate decarboxylase [Desulfovibrio sp. 3_1_syn3] Length = 406 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 104/405 (25%), Positives = 168/405 (41%), Gaps = 32/405 (7%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 LE L P Y Y AI + F+G D + Y++K NSN+ + + +A G+ Sbjct: 5 DLEILLKQHGFPLYVYDRKAISGRIARLRDIFNGFD--ILYSMKCNSNREICRHMADCGA 62 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+D S+ E+ A A VP E+I+FS GK+ D++ +S +EL+ ++ Sbjct: 63 GIDAASKNEVLTAHALGVPREKILFSAPGKSDDDLRET--LDNCLIIADSYTELQRIDAI 120 Query: 137 AVSLGKKAPIAFRVNPDINAN-THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 S + RVNPD + DKFG + + + L + +G Sbjct: 121 CASRNITCAVGLRVNPDFSYGSGPCPAMRPGLPDKFGEDEEGLPAHRDFLHRLEHARPTG 180 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + +H SQ+ ++ + F+ + L + G ++ ID GGGLGI Y + R + Sbjct: 181 IHVHARSQVLSADALGRCFEHVARLARVWNHGLGMPLEFIDFGGGLGIPYAGEMRSLNME 240 Query: 255 DYASLIH------QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + G + + +E GRFLV D G+ VT+++ IK+S KTFVI + Sbjct: 241 RLRGHLAGLLRLIPQDGPVPARRYVESGRFLVGDAGVFVTRIVDIKRSRGKTFVIAAGLL 300 Query: 309 NDFMRP------------TLYDAYHEINYIVNPAG-------DRLHIHADIVGPICETGD 349 N F+RP Y E + I G +C D Sbjct: 301 NHFLRPAIAGLFEALPLEPTYAGPCEPLWSGRGTYVPKALGLPAPAEIVTICGNLCTGMD 360 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 +A + + G++L E GAY A S ++S E + Sbjct: 361 TVARDVVLENAVVGNMLIFENAGAYAAALSPHGFSSHPEAREFLW 405 >gi|307253178|ref|ZP_07535055.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859345|gb|EFM91381.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 170 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 81/170 (47%), Positives = 112/170 (65%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ F Y L AE+VS+ + + TP Y YS +E+++ F AF ++C+A+K Sbjct: 1 MNHFNYKNQQLFAEDVSVSDIINQYGTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVK 60 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NSN A++ + LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI Sbjct: 61 SNSNIALLNVMVRLGSGFDIVSQGELERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIR 120 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 CFN+ES +EL +N+ A LGK API+ RVNPD++A+TH ISTG KE+K Sbjct: 121 CFNIESIAELHRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENK 170 >gi|302560274|ref|ZP_07312616.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces griseoflavus Tu4000] gi|302477892|gb|EFL40985.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces griseoflavus Tu4000] Length = 470 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 96/401 (23%), Positives = 160/401 (39%), Gaps = 21/401 (5%) Query: 31 CYSTTAIEKNYLTFSNAF-----DGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 T I ++ AF G + +A+KA+ V++ L G G ++ S GE Sbjct: 54 LLDVTGIRESAAELKAAFEAVAAPGTPVLHAFAVKASPLVPVLRLLREEGIGAEVASPGE 113 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L A AA V ER V KT E+ AL GI + EL L+ ++P Sbjct: 114 LALARAAGVEPERTVLDSPAKTPAELREALALGIAVMVDSPQ-ELDRLDALMAGSASRSP 172 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDMHIGSQI 204 + RVNP + + + +ST KFG+ + + L ++ + H GSQ Sbjct: 173 VGIRVNPQVGGGSIEALSTATATSKFGVALRDEGAREWVVRAYLDRPWLTRLHAHTGSQG 232 Query: 205 DQIESFHKAFKLLRDLTQQ--LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + +L ++ R+ + ID+GGGL + + S+ P+ + YA L+ + Sbjct: 233 IALSMMARGITETYELAEEINRRAGRRQVDTIDIGGGLPVNFASEESTPTYTRYARLLSE 292 Query: 263 YF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + + ++ E GR L+A G +V +V K + + + + R A Sbjct: 293 AVPGLFDGRYGLVTEFGRSLLAKHGTVVARVEYAKSAGGRPVAVTHAGVQVATRTVYAPA 352 Query: 320 YHEINYIVNPAG----DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + A + + D+ GP C GD +A + + L GD TGAY Sbjct: 353 SWPLRIAAYDAKGRPKEGPPVVQDVAGPACFAGDLLAQAQSLPLLEQGDHAAALDTGAYY 412 Query: 376 AVQSGTYNSRLLIPEI-MVNGSQ----FHIIRPRMTFQELI 411 YNS V G + F +R T +E++ Sbjct: 413 FAHHYAYNSLPRPGVYGFVPGGESGIAFATVRTPQTVEEIV 453 >gi|294101351|ref|YP_003553209.1| Orn/DAP/Arg decarboxylase 2 [Aminobacterium colombiense DSM 12261] gi|293616331|gb|ADE56485.1| Orn/DAP/Arg decarboxylase 2 [Aminobacterium colombiense DSM 12261] Length = 395 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 93/383 (24%), Positives = 151/383 (39%), Gaps = 19/383 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ A +TP IEK Y + + YA+KAN V+K L GS Sbjct: 22 RIKAFAADKETPCLIIDLDVIEKQYDSLKKGMPF--AKIYYAVKANPLDDVVKLLVEKGS 79 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI S EL + LA +RI + K +I A + G+ F +SES+L L + Sbjct: 80 CFDIASVYELNQVLALGATPDRISYGNTIKKAKDIAYAYEKGVRLFATDSESDLYKLAKH 139 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I T + KFG ++ L + L ++ GV Sbjct: 140 APGSKVFFRIL----------TDGSGADWPLSRKFGAHPDTLYKLILMSKELG-LEPYGV 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL--GIAYHSDHRPPSSS 254 H+GSQ + + A + L + G ++ I++GGG Y + + Sbjct: 189 SFHVGSQQRDLGQWDHAISTCKYLFDSVAEKGIRLKMINLGGGFPSQYIYPTVGAEVYGT 248 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + + FG +IILEPGR++ D G++VT+V+ I + ++ Sbjct: 249 EITRYLKEDFGENLPEIILEPGRYMAGDAGVMVTEVVLISRKSEFGQYRWIYLDAGKFGG 308 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKT 371 + I Y + + A I GP C++ D + ++ L GD +YI T Sbjct: 309 LIETLDESIKYPIYVEKKGIVQEAIIAGPTCDSMDILYEQYKYELPLTLEEGDRVYILTT 368 Query: 372 GAYGAVQSGTY-NSRLLIPEIMV 393 GAY S Y N + ++ Sbjct: 369 GAYTQSYSSVYFNGFPPLAAYIL 391 >gi|213646093|ref|ZP_03376146.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 165 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 59/154 (38%), Positives = 86/154 (55%), Gaps = 10/154 (6%) Query: 273 LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI---NYIVNP 329 +EPGR+LVA G+LVT+V S+K+ + FV++D ND MRP +Y +YH I Sbjct: 12 IEPGRYLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRA 71 Query: 330 AGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + + GP+CE+GD R + PGD L + TGAYGA S Y Sbjct: 72 LENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNY 131 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 NSR L+PE++ + Q +IR R T +EL+ L+ + Sbjct: 132 NSRPLLPEVLFDNGQARLIRRRQTIEELLALEML 165 >gi|330955127|gb|EGH55387.1| diaminopimelate decarboxylase [Pseudomonas syringae Cit 7] Length = 402 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 89/386 (23%), Positives = 156/386 (40%), Gaps = 17/386 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + Y A++++ A + YA+KANS +++TLA L SG +I S GE+ R Sbjct: 25 AFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A + VFSG GK ++ AL + + ++ES +E+ L Q A G+ P+ Sbjct: 84 V-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGRVQPVFL 142 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+NP + A +++ FGI + + + G +H S +E Sbjct: 143 RINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHVHAMSHQMSVE 202 Query: 209 SFHKAFKLLRDLTQQLR---SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + Q+ + + + H +VGGG+G+ Y + + + + G Sbjct: 203 RHEQLLDFYLQRWQEWKALARDPSQLTHFNVGGGIGVDYL-NSQQFDWQRLCRYLEKRLG 261 Query: 266 NLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 I EPGRF+ A G +V+ K S + F++ + F P H + Sbjct: 262 EQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQSHDHPV 321 Query: 324 NYIVN--PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA--VQS 379 ++ N + + IVG +C D ++ + + GDLL + GAYG + Sbjct: 322 IHLPNAPQSTESSEQAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGYNISHA 381 Query: 380 GTYNSRLLIPEIMVNGSQFHIIRPRM 405 + + V + R R Sbjct: 382 -DFLCHPRPSQHFVRNGE----RVRQ 402 >gi|73979729|ref|XP_856472.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 3 [Canis familiaris] Length = 436 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 76/365 (20%), Positives = 124/365 (33%), Gaps = 21/365 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++ ++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAREL-NIDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F +A R + ++ N P AS + Sbjct: 207 TFVQAISDARCVFDMGITSVINPALDKYFPADSGVR--VIAEPGRYYVASAFTLAVNIIA 264 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 K++L+ + + D F A+ + Sbjct: 265 KKLVLK------EQTDYSAFLDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKR 318 Query: 329 PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 P D + I GP C+ D I + GD + E GAY + T+N Sbjct: 319 PKPDEKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAAASTFNGFQRP 378 Query: 389 PEIMV 393 V Sbjct: 379 TIYYV 383 >gi|330942902|gb|EGH45399.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 402 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 92/395 (23%), Positives = 161/395 (40%), Gaps = 18/395 (4%) Query: 22 AHVVQT-PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 A ++T P + Y A++++ A + YA+KANS +++TLA L SG Sbjct: 15 ARALETDPLAAFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGF 73 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 +I S GE+ R A + VFSG GK ++ AL + + ++ES +E+ L Q A Sbjct: 74 EISSGGEIERV-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAE 132 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 G+ P+ R+NP + A +++ FGI + + + G + Sbjct: 133 QAGRVQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLMLKGFHV 192 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLR---SNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 H S +E + Q+ + + + H +VGGG+G+ Y + + Sbjct: 193 HAMSHQMSVERHEQLLDFYLQRWQEWKALARDPGQLTHFNVGGGIGVDYLNSQQFDGQRL 252 Query: 256 YASLIHQYFGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 L + I+ EPGRF+ A G +V+ K S + F++ + F P Sbjct: 253 CRYLEKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLP 312 Query: 315 TLYDAYHEINYIVN--PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 H + ++ N + + IVG +C D ++ + + GDLL + G Sbjct: 313 VAQSHDHPVIHLPNAPQSTESSEQAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAG 372 Query: 373 AYGA--VQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 AYG + + + V + R R Sbjct: 373 AYGYNISHA-DFLCHPRPSQHFVRNGE----RVRQ 402 >gi|206889745|ref|YP_002249553.1| ornithine decarboxylase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741683|gb|ACI20740.1| ornithine decarboxylase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 372 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 81/366 (22%), Positives = 146/366 (39%), Gaps = 17/366 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P+ +++ ++ V YA+KAN + VI+ L G +I SEGEL Sbjct: 24 PYLLLDREILKEKISLIGRGIK--NSKVFYAVKANPDIDVIRYLNSFNVGFEIASEGELA 81 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 V ERI+ S KT + A++ GI + +S +E++ L + + Sbjct: 82 ILKQLNVEPERIITSNPVKTFKFLKEAVEYGIEYYAFDSIAEVEKLAKYTPRKKVYVRLT 141 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + S KFG+ + + L YA G+ H+GSQ + Sbjct: 142 V----------PNEGSEWPLSKKFGVEMEEAAQLLIYAKQRGL-DPIGITFHVGSQCSNV 190 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++H A L + +R NG I+ +++GGG I Y + + Sbjct: 191 YNWHTAIHKAGQLKELVRKNGIEIKMLNIGGGYPIEYTKKVPSIETIETKINSILEEYFP 250 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 +I +EPGR +V D G+ V+++I + D+ ++ +DV + + + ++ ++ Sbjct: 251 DTEIFIEPGRAVVGDAGVFVSRIIGKAQRGDENWLYIDVGVFNGLMESIGGIKYQYIVGS 310 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 I GP C++ D I + P G L+ I GAY + +N Sbjct: 311 R----GEEKEWTIAGPSCDSFDVIDREVVLPEPDVGSLILILSAGAYTISYASEFNGFST 366 Query: 388 IPEIMV 393 ++ Sbjct: 367 PKTFLI 372 >gi|327297983|ref|XP_003233685.1| ornithine decarboxylase [Trichophyton rubrum CBS 118892] gi|326463863|gb|EGD89316.1| ornithine decarboxylase [Trichophyton rubrum CBS 118892] Length = 460 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 85/385 (22%), Positives = 140/385 (36%), Gaps = 45/385 (11%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N + V++ +A LG+G D S+ E+ Sbjct: 73 PFYVADLGEVYRQHIRWKTNLPRVKP--FYAVKCNPDPQVLRLMAVLGNGFDCASKAEID 130 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA V RI+++ KT + A Q G+ ++ EL + + I Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKEMCPDAELYLRIL 190 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + L A L + + GV H+GS + Sbjct: 191 ----------TDDSASLCRLSMKFGASLSSARPLLELAHGLG-LNVVGVSFHVGSGAEDP 239 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +SF KA + R + G +++ +DVGGG + Sbjct: 240 KSFIKAVQDARFVFDCAAEIGFDLKVLDVGGGFSDDTFEPFAAALGDAL-----DTYFPP 294 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSA------------------------DKTFVI 303 ++I EPGR+ VA L VI+ + + Sbjct: 295 HIRVIAEPGRYYVATAFTLAANVIARRDVGVEELLSDSESDSTTPSRASTPSSSGAYMIY 354 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGD--RLHIHADIVGPICETGDFIALNRKIA-LP 360 L+ + ++D H + I+ D I I GP C+ D I+ + L Sbjct: 355 LNDGVYGNFSNIVFDHQHPVAQILTKDDDYTSAPIEYSIWGPTCDGIDVISERVTLNGLL 414 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSR 385 G+ LY E GAY + +N Sbjct: 415 GVGNWLYFENMGAYTQCSATRFNGF 439 >gi|121602552|ref|YP_989352.1| pyridoxal-dependent decarboxylase [Bartonella bacilliformis KC583] gi|120614729|gb|ABM45330.1| pyridoxal-dependent decarboxylase [Bartonella bacilliformis KC583] Length = 377 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 87/365 (23%), Positives = 144/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + +NYL F A + YA+KAN +++ L LGS D S E++ Sbjct: 18 PCLVVDLDIVHENYLNFEKALPQS--RIFYAVKANPAPEILRLLVSLGSSFDAASVAEIK 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L + AERI F K +I A G+ + V+ E++ + + A + Sbjct: 76 MILESGATAERISFGNTIKKERDIASAHALGVSLYAVDCIEEVEKVARAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T+ + + KFG + A L ++ GV H+GSQ + Sbjct: 136 ----------TNGEGAEWPLSRKFGCVPAMAVDVLCRAHQLG-LQAHGVSFHVGSQQTDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 ++ +A + + ++L G ++ I++GGG Y D +YFG Sbjct: 185 NAWDRALSDVAIVFERLEKEGIQLKLINMGGGFPTRYLHDVPTAQVCGVVIFDSLKKYFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ T+V+ I K AD + I Y Sbjct: 245 NRIPETIIEPGRAMVGNAGVIRTEVVLISKKADNDNIRWVYLDVGKFNGLAETMDEAIRY 304 Query: 326 IVN-PAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 + D+ + GP C++ D + + L GD L I TGAY A + Sbjct: 305 PIETMRDDKAMEPCILAGPTCDSADVMYEKSLYLLPLSLTVGDELLIHGTGAYTATYASV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|121706982|ref|XP_001271694.1| ornithine decarboxylase [Aspergillus clavatus NRRL 1] gi|119399842|gb|EAW10268.1| ornithine decarboxylase [Aspergillus clavatus NRRL 1] Length = 441 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 88/375 (23%), Positives = 137/375 (36%), Gaps = 36/375 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I + +L + + YA+K N + +++ +A LG+G D S+ E+ Sbjct: 64 FYVADMGEIYRQHLRWKMNLSRVKP--FYAVKCNPDPEILRLMAKLGNGFDCASKSEIDL 121 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 AL + RI+++ KT + A Q G+ ++ EL + I Sbjct: 122 ALETGIDPSRIIYAQPCKTKSYLRYAAQVGVRQMTFDNADELYKIKACFPDAELYLRIL- 180 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A+ L +K+ GV H+GS + Sbjct: 181 ---------TDDSTSLCRLSMKFGASLDIARQLLELAAEL-ELKVVGVSFHVGSGAEDPR 230 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q GH + +DVGGG + Sbjct: 231 AFLKAVQDARLVFDQAAEVGHELHTLDVGGGFSQDTFETFAGILGEAL-----DTYFPPH 285 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM-------NDFMRPTLYDAYH 321 +II EPGR+ VA L VI+ + D D M ++D H Sbjct: 286 IRIIAEPGRYYVASALTLAANVIARRDLRDPEDPANDAYMLYLNDGVYGNFSNIIFDHQH 345 Query: 322 EINYIVNPAGDR----------LHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEK 370 + I+ +G I I GP C+ D I + L GD LY E+ Sbjct: 346 PVAKILTRSGGPQPIAPNAATSEGIAYSIWGPTCDGIDVITQRIVLPGLLDVGDWLYFEE 405 Query: 371 TGAYGAVQSGTYNSR 385 GAY + +N Sbjct: 406 MGAYTKCSATRFNGF 420 >gi|319407636|emb|CBI81285.1| lysine/ornithine decarboxylase [Bartonella sp. 1-1C] Length = 377 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 90/365 (24%), Positives = 144/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + +NYL F A + YA+KAN +++ L LGS D S E+ Sbjct: 18 PCLVVDLDVVHENYLNFEKALPQS--RIFYAIKANPAPEILRLLVSLGSSFDAASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA A RI F K +I A GI + V+ E++ + + A + Sbjct: 76 MALAAGATANRISFGNTIKKERDIARAHALGISLYAVDCFEEVEKVARAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L ++ GV H+GSQ + Sbjct: 136 ----------TDGEGAEWPLSQKFGCVPSMAVDVLRYAHHLG-LQAHGVSFHVGSQQTDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 ++ +A + + L G +Q +++GGG Y D + A +YFG Sbjct: 185 NAWDRALSDTAFVFKSLEQEGIQLQLVNMGGGFPTRYLKDIPTVQTYGMAIFDSLKKYFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSA-DKTFVILDVAMNDFMRPTLYDAYHEIN 324 N + I+EPGR +V + G++ T+V+ I K + + + + F T Sbjct: 245 NRIPETIIEPGRAMVGNAGVIRTEVVLISKKGKNDNVRWVYLDIGKFNGLTETMDEAIRY 304 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 I D+ + GP C++ D + + L GD L I TGAY + Sbjct: 305 PIETAYDDKAMEPCILAGPTCDSADIMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|251790262|ref|YP_003004983.1| Diaminopimelate decarboxylase [Dickeya zeae Ech1591] gi|247538883|gb|ACT07504.1| Diaminopimelate decarboxylase [Dickeya zeae Ech1591] Length = 418 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 88/397 (22%), Positives = 156/397 (39%), Gaps = 17/397 (4%) Query: 12 HAENVSLEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 +V + +L P + Y TA+ ++ A + YA+KANS + ++ Sbjct: 8 SVHDV-IVRLQQQHVDPLAAFVYDLTALRRHVGEVMAALP-PGVELYYAIKANSEKPILD 65 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 +A L G +I S GE+ R + VFSG GK + DLAL+ G+ +VES E Sbjct: 66 AIAPLVHGFEISSGGEIARVAGCATR-KPFVFSGPGKLDSDFDLALEQGVEAIHVESRHE 124 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + L QRA G P+ R+NP++ ++ K++ FG+ + Sbjct: 125 IARLQQRAKRHGVVQPVFIRINPELASSLTSKLAMAGTPTPFGMDEADLPDAVRDVDNAS 184 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID-----VGGGLGIAY 244 +++ G +H S +E + L Q ++ Q I G G+ Sbjct: 185 HLQLKGFHVHAMSHQMVVERHQQLLDLYLTRWPQWKALSAQPQLITHLNVGGGIGVPYLT 244 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 P+ DY + EPGRF+ A G +V+ K+S K F++ Sbjct: 245 PERFDWPALCDY-LRTRLAQQPDVPVVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVC 303 Query: 305 DVAMNDFMRPTLYDAYHEINYIV--NPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 + F P H + ++ + +VG +C D ++ ++++ Sbjct: 304 RGGTHQFRLPVAQGHDHPVIHLPLTSMPTTGETRDWTVVGQLCTPKDVLSRDQRLTDVNI 363 Query: 363 GDLLYIEKTGAYGA--VQSGTYNSRLLIPEI-MVNGS 396 GDLL + GAYG + + + +++ Sbjct: 364 GDLLVLPLAGAYGYNISHA-DFLCHPRPEQYFLIDDG 399 >gi|164688768|ref|ZP_02212796.1| hypothetical protein CLOBAR_02415 [Clostridium bartlettii DSM 16795] gi|164602244|gb|EDQ95709.1| hypothetical protein CLOBAR_02415 [Clostridium bartlettii DSM 16795] Length = 409 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 91/410 (22%), Positives = 161/410 (39%), Gaps = 35/410 (8%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 ++ L + PFY Y I F Y++K N N+ VIK ++ G Sbjct: 6 IKDLMKEYKRPFYIYDEKVIGDQIQELKTNFPE--FEFLYSIKTNPNKDVIKFISQNDIG 63 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D S+ E+ +++ A +P E+I++S GKT +I+ I + E E+ + Sbjct: 64 SDSASKNEVFKSIDAGMPKEKIIYSSAGKTKQDIEETYDKCIITADSYHELEVINEVAKE 123 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 ++ + + N I +KFGI + + +L +KI G+ Sbjct: 124 HNIVLRVGVRINSNYAIEGG-------DILPNKFGIDEESLLPHKEFIDSLKNIKICGIH 176 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +H+ SQI E+ + +K + +L ++ ++ GGGLG+AY Sbjct: 177 VHLKSQILNYETLYNYYKDVLELAVFCVDEMGFDMDFVNFGGGLGVAYSQRENELEIESL 236 Query: 257 ASLI----HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 ++ L C++I+E GRF+V G VT +I K S ++I+ N F Sbjct: 237 GQKCRELIKEFKEKLNCRLIIESGRFIVCKSGTYVTYIIDKKVSRGANYLIVANGYNGFH 296 Query: 313 RPTLYDAY--------------------HEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + TL + ++ + + + G +C D I Sbjct: 297 KTTLAEMVKGYAQGPLEDIHAVEPLFTSYDAYEVKVLNKSQEKEEVTVCGNLCTAADLIG 356 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHII 401 N + GD++ I G+YG S ++S + EI +N II Sbjct: 357 KNLVLPKAEIGDIIAITNAGSYGFTLSPILFSSHDIPYEIYLNSKNQAII 406 >gi|331019663|gb|EGH99719.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 402 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 87/377 (23%), Positives = 155/377 (41%), Gaps = 11/377 (2%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + Y A++++ A + YA+KANS +++TLA L SG +I S GE+ R Sbjct: 25 AFIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A + VFSG GK ++ AL + + ++ES +E++ L A G+ P+ Sbjct: 84 V-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEEAGRVQPVFI 142 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+NP + A K++ FGI + + + + G +H S +E Sbjct: 143 RINPQLPAAQSSKLAMAGTATPFGIDEADLAEAVRLVDSATHLTLKGFHVHAMSHQMSVE 202 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQ---HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + Q ++ + + H +VGGG+G+ Y + + + L + Sbjct: 203 RHEQLLDFYLQRWQAWKALARHPEQLTHFNVGGGIGVDYLNSQQFDWQRLFRYLEKRLGE 262 Query: 266 NLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 I+ EPGRF+ A G V +V+ K S + F++ + F P H + Sbjct: 263 QPDSPILRFEPGRFISAYCGYYVIEVLDRKTSHGEHFLVCRGGTHQFRLPVAQSHDHPVI 322 Query: 325 YIVNPAGDR--LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA--VQSG 380 ++ + +VG +C D ++ + GDLL + GAYG + Sbjct: 323 HLPSVPPTAASPEQAYTVVGQLCTPKDVLSRRQPFKDVNIGDLLVLPMAGAYGYNISHA- 381 Query: 381 TYNSRLLIPEIMVNGSQ 397 + P+ V + Sbjct: 382 DFLCHPRPPQHFVRNGE 398 >gi|240851013|ref|YP_002972413.1| ornithine decarboxylase [Bartonella grahamii as4aup] gi|240268136|gb|ACS51724.1| ornithine decarboxylase [Bartonella grahamii as4aup] Length = 377 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 89/365 (24%), Positives = 147/365 (40%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NYL F A + YA+KAN +++ LA LGS D S E+ Sbjct: 18 PCLIVDLDVVRDNYLNFEKALPQS--RIFYAIKANPAPEILRLLASLGSSFDAASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A +ERI F K +I A G+ + V+ E++ + + A + Sbjct: 76 MALKAGATSERISFGNTIKKERDIARAYALGVSLYAVDCVEEVEKIARVAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T K + KFG + A L ++ GV H+GSQ + Sbjct: 136 ----------TDGKGAEWPLSRKFGCVPAMAVDVLRRAHQLG-LQAYGVSFHVGSQQVDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 ++ +A + ++L G +++ +++GGG Y D + A ++FG Sbjct: 185 SAWDRALSDAATVFKRLEQEGISLRLVNMGGGFPTRYLKDVPTEQAYGTAVFDSLKKHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADK-TFVILDVAMNDFMRPTLYDAYHEIN 324 N + I+EPGR +V + G++ T+V+ I K AD + + + F Sbjct: 245 NRIPETIIEPGRAMVGNAGVIRTEVVLISKKADNDNVRWVYLDIGKFNGLAETMDEAIRY 304 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 I P D++ + GP C++ D + LP GD + I TGAY + Sbjct: 305 PIETPHDDKVMEPCILAGPTCDSADVLYEKTPYPLPLSLTIGDEILIHGTGAYTTTYASV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|296818705|ref|XP_002849689.1| ornithine decarboxylase [Arthroderma otae CBS 113480] gi|238840142|gb|EEQ29804.1| ornithine decarboxylase [Arthroderma otae CBS 113480] Length = 457 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 86/385 (22%), Positives = 139/385 (36%), Gaps = 45/385 (11%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY I + ++ + + YA+K N N V++ +A LG+G D S+ E+ Sbjct: 70 PFYVADLGEIYRQHIRWKTNLPRVKP--FYAVKCNPNPMVLRLMAVLGNGFDCASKAEID 127 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA V RI+++ KT + A Q G+ ++ EL + I Sbjct: 128 LALAAGVDPTRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKSMCPDAELYLRIL 187 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + L A L + + GV H+GS + Sbjct: 188 ----------TDDSASLCRLSMKFGASLSSARPLLELAHELG-LNVVGVSFHVGSGAEDP 236 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +SF KA + R + + G +++ +DVGGG + Sbjct: 237 KSFIKAVQDARFVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGEAL-----DTYFPP 291 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSA------------------------DKTFVI 303 ++I EPGR+ VA L VI+ + + Sbjct: 292 HIRVIAEPGRYYVATAFTLAANVIARRDVGSEEQLSDSESDSTSPTRAATPASNGMYMIY 351 Query: 304 LDVAMNDFMRPTLYDAYHE--INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LP 360 L+ + ++D H + A I I GP C+ D I+ + + L Sbjct: 352 LNDGVYGNFSNIVFDHQHPVAQILTKDDAYTSAPIQYSIWGPTCDGIDVISESVTLNGLL 411 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSR 385 G+ LY E GAY + +N Sbjct: 412 GVGNWLYFENMGAYTQCSATRFNGF 436 >gi|70983858|ref|XP_747455.1| ornithine decarboxylase [Aspergillus fumigatus Af293] gi|66845081|gb|EAL85417.1| ornithine decarboxylase, putative [Aspergillus fumigatus Af293] Length = 433 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 73/384 (19%), Positives = 139/384 (36%), Gaps = 40/384 (10%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 +A PF+ + + + + D + YA+K N + +++ LA+LG+G D Sbjct: 39 AIADE---PFFVADLGQVIRQHRRWRVNLP--DVLPFYAVKCNPDPNLLRLLANLGTGFD 93 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S ELR L+ V RI+F+ K++ + A ++G+ ++ E L+ Sbjct: 94 CASIEELRTVLSLGVDPCRIIFANPCKSVSSLVFAARTGVTRTTFDNLDE---LDNIRTF 150 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 L + D +A +KFG + L A L + + GV H Sbjct: 151 LPNAELVLRLYASDSDA-------LINLGEKFGATVEASLPLLQRARELG-LDVCGVSFH 202 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 +G+ ++ A + + + +S G ++ +D+GGG + D Sbjct: 203 VGTGASNASAYVTAIRDAKIVFGYGKSLGFDMNLLDIGGGFQDSNLEDIACVLRPIL--- 259 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF-------- 311 +++ EPGR+ V L KV+S ++ + + Sbjct: 260 ---KEEFPGVRLLAEPGRYYVRSAYTLACKVLSRRRHSGTDHHDRPDMLYQNDGVYGNFM 316 Query: 312 ---------MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI-ALPR 361 + + + N I GP C++ D +A + + + R Sbjct: 317 NVLIEKETVRPSLVAYTWPFHSRGNNTRRKLEEHRYTIWGPTCDSMDCVAKDVPMTSEIR 376 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSR 385 GD L + GAY + +N Sbjct: 377 IGDWLKYKNMGAYTIATATQFNGF 400 >gi|288574389|ref|ZP_06392746.1| Ornithine decarboxylase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570130|gb|EFC91687.1| Ornithine decarboxylase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 395 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 84/376 (22%), Positives = 133/376 (35%), Gaps = 19/376 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP ++E+N+ + + YA+KAN ++A+++ L G D S EL Sbjct: 33 TPCLLLDLKSVERNFDDLTRTMPY--AKIHYAVKANPHEAILRMLIRKGCNFDFASINEL 90 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 LA ER+ + K + I A + G+ F +SE +L+ + + A + Sbjct: 91 DTMLALDTSPERLSYGHTIKKSEHIAYAYEKGVRLFATDSEDDLRRIAKNAPGSQVFFRL 150 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + KFG I L + L + G+ H+GSQ Sbjct: 151 FMECSGA----------DWSLSRKFGAHPDTIFKLIRLSKELDVI-PWGLSFHVGSQQRD 199 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYF 264 I + A R L + G ++ I++GGG Y P + + + F Sbjct: 200 IGQWGNAIASCRYLFDSAKELGIQLKLINLGGGFPAKYIQPTVPLEIYAKEVTRFLSEDF 259 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +II+EPGR LV D GIL T+V+ K I Sbjct: 260 PEGIPEIIIEPGRSLVGDCGILTTQVVLKSKKESYNPYSWLYIDAGKFGGLYETIDESIK 319 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 Y + I GP C++ D + + GD LY TGAY S Sbjct: 320 YPIYSEKQGPVEEYIIAGPTCDSLDVLYERDKYMLPKNLEEGDKLYFFSTGAYVNSCSLE 379 Query: 382 -YNSRLLIPEIMVNGS 396 +N + + Sbjct: 380 SFNGFKPPKVYVYDED 395 >gi|303321193|ref|XP_003070591.1| ornithine decarboxylase [Coccidioides posadasii C735 delta SOWgp] gi|240110287|gb|EER28446.1| ornithine decarboxylase [Coccidioides posadasii C735 delta SOWgp] Length = 445 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 86/374 (22%), Positives = 142/374 (37%), Gaps = 34/374 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N + V++ +AHLG+G D S+ E+ Sbjct: 69 PFYVADLGEVYRQHIRWKMNLGRVKP--FYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 126 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 LAA V RI+++ KT + A Q G+ ++ EL + I Sbjct: 127 YVLAAGVDPSRIIYAHPCKTKSYLRYAAQQGVKQMTFDNADELYKIKTMCPDAELFLRIL 186 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + SL A L + + GV H+GS + Sbjct: 187 ----------TDDSASLCRLSMKFGASLTVTRSLLELAKDLG-LNVVGVSFHVGSGAEDP 235 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +F KA + R + Q GH+++ +DVGGG S + Sbjct: 236 TAFVKAVEDARFVFDQASDIGHDLKVLDVGGGFCDETFERFAAALSDAL-----DTYFPP 290 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKK-------------SADKTFVILDVAMNDFMRP 314 ++I EPGR+ VA L VI+ + A+ + L+ + Sbjct: 291 HIRVIAEPGRYYVASAFTLAANVIARRDVSPAASDSDSASGPAEMYMIYLNDGVYGNFSN 350 Query: 315 TLYDAYHEINYIVNPAGDRLHIH--ADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKT 371 ++D H + I+ I GP C+ D I+ + + G+ LY E Sbjct: 351 IVFDHQHPVAQILTKDDMASTHPVEYSIWGPTCDGIDVISKRVTLNGVLGVGNWLYFENM 410 Query: 372 GAYGAVQSGTYNSR 385 GAY + +N Sbjct: 411 GAYTQCSATRFNGF 424 >gi|260889302|ref|ZP_05900565.1| carboxynorspermidine decarboxylase [Leptotrichia hofstadii F0254] gi|260860713|gb|EEX75213.1| carboxynorspermidine decarboxylase [Leptotrichia hofstadii F0254] Length = 395 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 60/404 (14%), Positives = 125/404 (30%), Gaps = 29/404 (7%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 ++ + L TP + +++N T + D + A K S ++ Sbjct: 8 DMDITNL----PTPAFIVDERLLKRNLETLKSVIDRTGCKILLAQKGFSMFYFYPLISEY 63 Query: 75 GSGLDIVSEGE--LRRALAAPVPA----ERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 +G S E L E +F+ + + ++ + FN ++ Sbjct: 64 LNGTTASSLFEARLGYEEMELKNPNKKLETHIFNPSYREDEFDEIMEITNHIVFNSFNQW 123 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 + R I+ + + + + + + L Sbjct: 124 KKFKSRVREFEEKSDKKISCGLRLNPEFSEVETEIYNPAGRFSRFGVTLENFKENELEGL 183 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 G + + +LR ++ HN++ ++ GGG +H Sbjct: 184 DGFHFHALCEQ---------NSDALENVLRIFEEKFGKYLHNMKWLNFGGG----HHITR 230 Query: 249 RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 I+ ++ LEPG + + G LV++V+ I K ++ ++L Sbjct: 231 EDYDIEKLVKCINYIKEKYDVEVYLEPGEAVALNTGFLVSEVLDITK--NEMDILLMDTS 288 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 P + + + + + + GP C GD I + GD L Sbjct: 289 ASCHMPDVIEMPYRPFIFGSGMSNEKKYTYRLGGPTCLAGDVIGDYSFDDPVKVGDKLIF 348 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMV--NGSQFHIIRPRMTFQEL 410 Y V++ T+N L I V +IR +++ Sbjct: 349 TDMAHYSMVKTNTFNGINLP-VIAVYTEKGGVEVIRKFE-YEDF 390 >gi|253573955|ref|ZP_04851297.1| carboxynorspermidine decarboxylase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846432|gb|EES74438.1| carboxynorspermidine decarboxylase [Paenibacillus sp. oral taxon 786 str. D14] Length = 375 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 120/388 (30%), Gaps = 21/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP Y +E+N + + + A KA S + SG Sbjct: 4 EELPTPCYVVDEKLLEQNLKILAGIMERTGAKIILAQKAFSMYTTYPLIGKYLSGTAASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R A E VF+ + ++ FN S+ E A Sbjct: 64 LYEARLGREAMGK-ENHVFAPAYREDQIDEIIELCDHVIFNSFSQVEKYRDRVLAAGKKV 122 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + H + +FG+ I L G+ Sbjct: 123 GLRINPECSTQV---GHDIYNPCAYGSRFGVTIEHFRPEL-----LDGISGFHFHTLCQQ 174 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 D + + A + ++ ++ I+ GGG I P + I + Sbjct: 175 NSDDLVTTLDAVE------EKFGPWLSQMEWINFGGGHHITREDYDIPL----LEACIRR 224 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ LEPG + + G L+T V+ I+D + + M L Y Sbjct: 225 MQDKYGLEVYLEPGEAVALNAGYLITTVLDT-MKNGLDIAIVDASASCHMPDVLEMPYRP 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + G++ + GP C +GD I +PGD L Y V++ T+ Sbjct: 284 PLFGSGEPGEKP-YTYRLGGPTCLSGDNIGDYSFDEPLKPGDRLVFGDMAIYSMVKNTTF 342 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 N L ++ + I +++ Sbjct: 343 NGMPLPALVLQHKDGDCEILHEFGYEDF 370 >gi|189426082|ref|YP_001953259.1| diaminopimelate decarboxylase [Geobacter lovleyi SZ] gi|189422341|gb|ACD96739.1| Diaminopimelate decarboxylase [Geobacter lovleyi SZ] Length = 439 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 101/423 (23%), Positives = 170/423 (40%), Gaps = 36/423 (8%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 +A TP Y + IE + N + V YA+KANS++ V++ + G LD Sbjct: 19 IARQWGTPIYLHDQEYIENSCEQLLNMPNAFGLHVRYAMKANSDRTVLRVVTGKGLDLDC 78 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY---CFNVESESELKTLNQRA 137 S E RA AA +P R++ + + L++ I +NV S + + A Sbjct: 79 SSLDEAARAHAAGIPFSRMMLTTQEVPGGDERAELEAMIKAGLKYNVCSMLQFNLIADFA 138 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + TG + FG+ ++ + + A A G++ + V Sbjct: 139 KANRIDLSMRVHP-GAAGGGESATRDTGSEYSCFGVHLNDVPKVKAMADE-KGLRFTQVH 196 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +HIGS K + + +++ + + GGGL +A + + Sbjct: 197 VHIGSGG----DPEKWRQNIDRELGFVKTYFPDATTVSFGGGLKVARMPGEKQADIASLG 252 Query: 258 SLIHQYFGNLQC------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + Q + ++ +EPG F+VA+ G ++T++I K + + F+I+D M Sbjct: 253 AYAKQRIEEFKAETGRELQMEIEPGTFVVANSGHIITRIIDKKLTNELNFLIVDGGMELL 312 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALN------ 354 RP LY + H IV G L D IVG CE+GD + L+ Sbjct: 313 TRPLLYGSEHP-VSIVRQDGTLLSSEYDQAPAQGLKSFGIVGRCCESGDSVRLDNDGNIV 371 Query: 355 -RKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIM-VNGSQFHIIRPRMTFQELI 411 IA P GD + I TGAY S YNS +M + IR + ++L Sbjct: 372 PVLIAEPEIGDYVVIGGTGAYSESMSPENYNSHRKPGAVMKTKSGELVQIRKKQVREQLT 431 Query: 412 ELD 414 + + Sbjct: 432 QNE 434 >gi|171692171|ref|XP_001911010.1| hypothetical protein [Podospora anserina S mat+] gi|170946034|emb|CAP72835.1| unnamed protein product [Podospora anserina S mat+] Length = 510 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 84/384 (21%), Positives = 142/384 (36%), Gaps = 42/384 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L + + YA+K N + ++K LA LG+G D S+ E+ + Sbjct: 121 FFVADLGEVYRQHLRWKMNLPRVKP--FYAVKCNPDPMLLKLLAALGNGFDCASKAEIEQ 178 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ KT + Q G+ ++ EL+ + + I Sbjct: 179 VLRMGVDPSRIIYAQPCKTNSYVRYVAQQGVRAMTFDNADELRKIARFYPEAELYLRIL- 237 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A A L + + GV H+GS Sbjct: 238 ---------TDDTSSLCRLSMKFGASLDSTDGLLALARDL-NLNVVGVSFHVGSGASDPS 287 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + + QQ S G +++ +DVGGG + + +L + + Sbjct: 288 AFLKAVRDSHMVFQQAASYGFSLKTLDVGGGFCADNTFEQMAGVLRE--ALDEYFPAHSG 345 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADK-------------TFVILDVAMNDFMRPT 315 +I EPGRF + L VI+ + D + ++ + Sbjct: 346 INLIAEPGRFYASAAYTLACNVIARRTIQDTALINNGTTTPDPSYMLYVNDGLYGNFSSI 405 Query: 316 LYDAYHE-------------INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPR 361 ++D H N DR + I GP C+ D I + + + Sbjct: 406 MFDHQHPEAKVLRAGGQTLYDTPAANGMDDRSGVEYSIWGPTCDGIDRITESIRFPVVLD 465 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSR 385 GD LY E GAY + T+N Sbjct: 466 VGDWLYFEDMGAYTKCSATTFNGF 489 >gi|119180252|ref|XP_001241615.1| ornithine decarboxylase [Coccidioides immitis RS] Length = 447 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 86/374 (22%), Positives = 142/374 (37%), Gaps = 34/374 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N + V++ +AHLG+G D S+ E+ Sbjct: 71 PFYVADLGEVYRQHIRWKMNLGRVKP--FYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 128 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 LAA V RI+++ KT + A Q G+ ++ EL + I Sbjct: 129 YVLAAGVDPSRIIYAHPCKTKSYLRYAAQQGVKQMTFDNADELYKIKTMCPDAELFLRIL 188 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + SL A L + + GV H+GS + Sbjct: 189 ----------TDDSASLCRLSMKFGASLTVTRSLLELAKDLG-LNVVGVSFHVGSGAEDP 237 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +F KA + R + Q GH+++ +DVGGG S + Sbjct: 238 TAFVKAVEDARFVFDQASDIGHDLKVLDVGGGFCDETFERFAAALSDAL-----DTYFPP 292 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKK-------------SADKTFVILDVAMNDFMRP 314 ++I EPGR+ VA L VI+ + A+ + L+ + Sbjct: 293 HIRVIAEPGRYYVASAFTLAANVIARRDVSPAASDSDSATGPAEMYMIYLNDGVYGNFSN 352 Query: 315 TLYDAYHEINYIVNPAGDRLHIH--ADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKT 371 ++D H + I+ I GP C+ D I+ + + G+ LY E Sbjct: 353 IVFDHQHPVAQILTKDDMASTHPVEYSIWGPTCDGIDVISKRVTLNGVLGVGNWLYFENM 412 Query: 372 GAYGAVQSGTYNSR 385 GAY + +N Sbjct: 413 GAYTQCSATRFNGF 426 >gi|86359219|ref|YP_471111.1| ornithine decarboxylase protein [Rhizobium etli CFN 42] gi|86283321|gb|ABC92384.1| probable ornithine decarboxylase protein [Rhizobium etli CFN 42] Length = 506 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 149/373 (39%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P I +N+ F +A D+ + YA+KAN V+K LA LGS D S E+ Sbjct: 147 PCLVVDLDVIRENFHAFRHAMP--DSAIYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 204 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A A RI + K ++ A G+ F V+S E++ +++ A + Sbjct: 205 MALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 264 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L GV H+GSQ+ ++ Sbjct: 265 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLQS-YGVSFHVGSQMTKV 313 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ A + + QL G ++Q +++GGG Y D + + +FG Sbjct: 314 DAWDSALADAKRVFVQLAKQGIHLQMVNMGGGFPTRYLRDVPSAEAYGKSIYQALRTHFG 373 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I K +D I Y Sbjct: 374 NQIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRY 433 Query: 326 IVNPAGDRLH-IHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D I GP C++ D + LP GD + IE TGAY S Sbjct: 434 PIRTERDGDEMEPCVIAGPTCDSADVLYEKNLYPLPLSLTIGDEVLIEGTGAYTTTYSAV 493 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 494 AFNGFEPLKAYVI 506 >gi|320035934|gb|EFW17874.1| ornithine decarboxylase [Coccidioides posadasii str. Silveira] Length = 447 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 86/374 (22%), Positives = 142/374 (37%), Gaps = 34/374 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N + V++ +AHLG+G D S+ E+ Sbjct: 71 PFYVADLGEVYRQHIRWKMNLGRVKP--FYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 128 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 LAA V RI+++ KT + A Q G+ ++ EL + I Sbjct: 129 YVLAAGVDPSRIIYAHPCKTKSYLRYAAQQGVKQMTFDNADELYKIKTMCPDAELFLRIL 188 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + SL A L + + GV H+GS + Sbjct: 189 ----------TDDSASLCRLSMKFGASLTVTRSLLELAKDLG-LNVVGVSFHVGSGAEDP 237 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +F KA + R + Q GH+++ +DVGGG S + Sbjct: 238 TAFVKAVEDARFVFDQASDIGHDLKVLDVGGGFCDETFERFAAALSDAL-----DTYFPP 292 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKK-------------SADKTFVILDVAMNDFMRP 314 ++I EPGR+ VA L VI+ + A+ + L+ + Sbjct: 293 HIRVIAEPGRYYVASAFTLAANVIARRDVSPAASDSDSASGPAEMYMIYLNDGVYGNFSN 352 Query: 315 TLYDAYHEINYIVNPAGDRLHIH--ADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKT 371 ++D H + I+ I GP C+ D I+ + + G+ LY E Sbjct: 353 IVFDHQHPVAQILTKDDMASTHPVEYSIWGPTCDGIDVISKRVTLNGVLGVGNWLYFENM 412 Query: 372 GAYGAVQSGTYNSR 385 GAY + +N Sbjct: 413 GAYTQCSATRFNGF 426 >gi|1352223|sp|P14019|DCOR_CRIGR RecName: Full=Ornithine decarboxylase; Short=ODC gi|49440|emb|CAA34784.1| unnamed protein product [Cricetus cricetus] Length = 455 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 78/379 (20%), Positives = 137/379 (36%), Gaps = 29/379 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + K +L + A YA+K N ++A++ TLA +D S+ E++ Sbjct: 39 FYVADLGDVLKKHLRWLKALP---VTPFYAVKCNDSRALVNTLAA--ITVDCASKTEIQL 93 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP ER++++ K + +I A +G+ +SE EL + + + K Sbjct: 94 VQGLGVPPERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKVTKLVLRI- 152 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 153 --------ATDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPE 203 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G ++ +D+GGG + + + + + + + Sbjct: 204 TFVQALSDARCVFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPPD 263 Query: 267 LQCKIILEPGRFLVADVGILVTKV------------ISIKKSADKTFVILDVAMNDFMRP 314 ++I EPGR+ VA L + + + D F Sbjct: 264 SGVRVIAEPGRYYVASAFTLAVNIIAKKIVSKGSDDEDESSEQTFMYYVNDGVYGSFNCI 323 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 A+ + P D + + I GP C+ D I + GD + E GAY Sbjct: 324 LYDHAHVKPLLPKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAY 383 Query: 375 GAVQSGTYNSRLLIPEIMV 393 + T+N V Sbjct: 384 TVAAASTFNGFQRPSIYYV 402 >gi|294666035|ref|ZP_06731296.1| diaminopimelate decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604175|gb|EFF47565.1| diaminopimelate decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 398 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 81/373 (21%), Positives = 142/373 (38%), Gaps = 7/373 (1%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y A++++ + YA KAN+ +++TLA G + S GEL Sbjct: 27 AYVYDLAALDRHAAWMRAQLP-AQCELFYAAKANAEPPILRTLAPHVDGFEAASGGELAW 85 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A P ++F G GK E+ A +VES SEL+ L + A G+ P+ Sbjct: 86 L-HAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHVESLSELERLVEVAAHAGRCVPVFL 144 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+N + ++ G + FG+ +H+ P ++++G H+ S Sbjct: 145 RMNIAVPGAQSTRLMMGGQPSPFGLDPCDLHAAMQRLQASPSLRLTGFHFHLMSHQRDAT 204 Query: 209 SFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYAS--LIHQYFG 265 + + QQ R ++ GGG G+ Y + + + + Sbjct: 205 AQLHLIAAYLRIVQQWRHTYALGPLRVNAGGGFGVDYLAPDASFDWAGFCAGLPALLRDH 264 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPGR++ A G + +V+ +K+S F I + F P H Sbjct: 265 GTDLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQGHDHPFRV 324 Query: 326 IVNPAGDR-LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYN 383 + +VG +C D +A ++ +A PGD L GAY S + Sbjct: 325 LRGERAPVLRETPVTLVGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQQFL 384 Query: 384 SRLLIPEIMVNGS 396 ++ + Sbjct: 385 MHPPPQKVFLTEG 397 >gi|159123567|gb|EDP48686.1| ornithine decarboxylase, putative [Aspergillus fumigatus A1163] Length = 433 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 76/384 (19%), Positives = 142/384 (36%), Gaps = 40/384 (10%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 +A PF+ + + + + D + YA+K N + +++ LA+LG+G D Sbjct: 39 AIADE---PFFVADLGQVIRQHRRWRVNLP--DVLPFYAVKCNPDPNLLRLLANLGTGFD 93 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S ELR L+ V RI+F+ K++ + A ++G+ ++ E L+ Sbjct: 94 CASIEELRTVLSLGVDPCRIIFANPCKSVSSLVFAARTGVTRTTFDNLDE---LDNIRTF 150 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 L + D +A +KFG + L A L + + GV H Sbjct: 151 LPNAELVLRLYASDSDA-------LINLGEKFGATVEASLPLLQRARELG-LDVCGVSFH 202 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 +G+ ++ A + + + +S G ++ +D+GGG + D Sbjct: 203 VGTGASNASAYVTAIRDAKIVFGYGKSLGFDMNLLDIGGGFQDSNLEDIACVLRPIL--- 259 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM------- 312 +++ EPGR+ V L KV+S ++ + + Sbjct: 260 ---KEEFPGVRLLAEPGRYYVRSAYTLACKVLSRRRHSGTDHHDRPDMLYQNDGVYGNFM 316 Query: 313 ---------RPTLYDAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIALNRKI-ALPR 361 RP+L + N + I GP C++ D +A + + + R Sbjct: 317 NVLIEKETVRPSLVAYTWPFHSRGNDTRRKLEEHRYTIWGPTCDSMDCVAKDVPMTSEIR 376 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSR 385 GD L + GAY + +N Sbjct: 377 IGDWLKYKNMGAYTIATATQFNGF 400 >gi|320007100|gb|ADW01950.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces flavogriseus ATCC 33331] Length = 428 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 89/396 (22%), Positives = 153/396 (38%), Gaps = 19/396 (4%) Query: 32 YSTTAIEKNYLTFSNAF---DGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 I + AF G+ + +A KA S V++ LA G G ++ S GELR Sbjct: 16 LDADGIRDSVDALRAAFAAEPGVRVLHTFAAKAASLVPVLRLLADCGMGCEVASPGELRL 75 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A+ A P RIV KT E+ LAL G+ N +S E++ + + + Sbjct: 76 AVEAGFPPARIVLDSPAKTRAELRLALALGVA-VNADSFGEIRRIEELRSPGSPS-VLGL 133 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL-PGVKISGVDMHIGSQIDQI 207 RVNP + + +ST KFG+ + + T ++ + H+GSQ + Sbjct: 134 RVNPQVGGGSIGAMSTATATSKFGVALRDPGARERVVQTFAERPWLTRLHAHVGSQGCSL 193 Query: 208 ESFHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY-- 263 E L +++ I +D+GGGL + + D P+ ++Y + + Sbjct: 194 ELITAGIAETYRLAEEINEALGTRRITGMDIGGGLPVNFSDDESRPAFAEYVTALRAAAP 253 Query: 264 -FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +++ E GR L+A G + +V K++ + + R Sbjct: 254 GMFDGRYELVTEFGRSLLAKNGFIGARVEYTKEAGGRRIALTHAGAQVATRTVFMPDAWP 313 Query: 323 IN----YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + + DI GP C GD +A R++ GD + + TGAY Sbjct: 314 LRVGAFDGEGNPRSGRTMVQDIAGPCCFAGDLVAQARELPELHEGDFVVLYDTGAYYFST 373 Query: 379 SGTYNSRLLIPEIMVNGS----QFHIIRPRMTFQEL 410 +YNS G +F +R + + Sbjct: 374 PWSYNSLPRPAVYGFAGGSGGLRFAPVREAQSLDSM 409 >gi|218781864|ref|YP_002433182.1| diaminopimelate decarboxylase [Desulfatibacillum alkenivorans AK-01] gi|218763248|gb|ACL05714.1| Diaminopimelate decarboxylase [Desulfatibacillum alkenivorans AK-01] Length = 402 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 84/388 (21%), Positives = 148/388 (38%), Gaps = 9/388 (2%) Query: 6 YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSN 64 Y +G+L S L +V TP + YS I +N A +D + YA+KAN Sbjct: 17 YKDGNLVFSGKSAAGLINVTGTPAFFYSANRISQNLERLQEALSQLDSYQIYYAIKANRF 76 Query: 65 QAVIKTLAHLG-SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ + G G+DI S EL A + I ++ T DE+ L + N Sbjct: 77 APILTHIKKTGLCGVDICSPNELLHAFSCGFTCSEISYTAHAMTNDELRLLADNPDVRLN 136 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 +S S ++ L Q I RVNP + + DK Sbjct: 137 CDSLSTIRRLGQFC----SHRKIGIRVNPAMGIGYRDSETLRYSGDKTTKFGVYREQFEE 192 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + + +H + + + F + + T ++ +++GGGLG+ Sbjct: 193 ALALASKHGLIVDTIHFHTGCGYLNNQLSIFDEILEATHWFTDKVKDLASVNLGGGLGVP 252 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + D + S+I++++G + +EPG ++V D GIL+ +V ++++ F+ Sbjct: 253 HDEDDVNLDLDSWVSVINKHYGGKGLTVCVEPGDYVVKDSGILILEVNTVERKQQTDFIG 312 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRP 362 ++ N + P Y E + I G I E+ D N + + Sbjct: 313 VNGGFNLAIEPAFYGLPCEPVVLEQKTD--TLKPVTIAGNINESLDVWKDNFPMPDQIKE 370 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPE 390 GDLL G Y + + R + E Sbjct: 371 GDLLAFINAGGYASSMMSNHCMRGQVSE 398 >gi|118581021|ref|YP_902271.1| carboxynorspermidine decarboxylase [Pelobacter propionicus DSM 2379] gi|118503731|gb|ABL00214.1| carboxynorspermidine decarboxylase [Pelobacter propionicus DSM 2379] Length = 392 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 64/390 (16%), Positives = 120/390 (30%), Gaps = 14/390 (3%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + +EK+ + +P Y + N N + ALKA S + ++ Sbjct: 3 GIDIEKILELAPSPAYVVDLGRLRHNLAILDNVQKRSGAKILMALKAFSMWSTFPLISRT 62 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 +G+ S E R E F+ K D ++L S FN + E Sbjct: 63 LAGVCASSPWEARLGRE-EFGGEVHSFAAAFKERDVVELLEISNHLVFNSLGQLERFRP- 120 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + I RVNP+ + + GIP+ + + + Sbjct: 121 -LWEAKHGNVSIGLRVNPEHSEGHTAIYDPCAPCSRLGIPLAEFE---RRIGEVGEERAL 176 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + F + R ++ ++ +++GGG +H Sbjct: 177 NGVEGLHFHTLCEQLFQPLERTARAFEEKFGRFLPRMKWLNLGGG----HHITREGYDID 232 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 L+ + + LEPG + GILV +V+ + + + + P Sbjct: 233 GLVDLVSYFREKYDLTVYLEPGEAIAIGTGILVGEVLDLVH--NAMDIAILDLSATCHMP 290 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + + + GP C GD I PGD L Y Sbjct: 291 DILEMPYRPDIKNGFDPGEKAHSYRLAGPSCLAGDVIGDWSFERPLLPGDRLAFLDMAHY 350 Query: 375 GAVQSGTYNSRLLIPEIMV--NGSQFHIIR 402 V++ T+N + ++R Sbjct: 351 TMVKTTTFNGIQHPAICTYEPETGELKVVR 380 >gi|254699413|ref|ZP_05161241.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 5 str. 513] gi|261749863|ref|ZP_05993572.1| orn/DAP/Arg decarboxylase 2 [Brucella suis bv. 5 str. 513] gi|261739616|gb|EEY27542.1| orn/DAP/Arg decarboxylase 2 [Brucella suis bv. 5 str. 513] Length = 377 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 86/365 (23%), Positives = 143/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P T + +NY F A + YA+KAN +++ LA LGS D S E+ Sbjct: 18 PCLVVDTDVVRENYQGFEKALPYS--RIFYAVKANPAPEILRLLASLGSSFDTASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A +RI + K +I A GI + V+ E++ + + A + Sbjct: 76 MALEAGATPDRISYGNTIKKERDIARAFDLGIRLYAVDCVEEVEKIARVAPGSRVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + A L + GV H+GSQ + Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPAMAKDVLRRAKALG-LDAYGVSFHVGSQQTDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QYFG 265 ++ +A + + L G ++ +++GGG Y D + A ++FG Sbjct: 185 TAWDRALADAAAVFRTLADEGIILRMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSRHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVI-SIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 N + I+EPGR +V + G++ T+V+ +K+ + + + + F Sbjct: 245 NRIPETIIEPGRGMVGNAGVIKTEVVLVSRKADNDNMRWVYLDIGKFGGLAETMDEAIRY 304 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 IV P + GP C++ D + LP GD + IE TGAY S Sbjct: 305 QIVTPHDGSETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|261856421|ref|YP_003263704.1| Orn/DAP/Arg decarboxylase 2 [Halothiobacillus neapolitanus c2] gi|261836890|gb|ACX96657.1| Orn/DAP/Arg decarboxylase 2 [Halothiobacillus neapolitanus c2] Length = 430 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 86/402 (21%), Positives = 150/402 (37%), Gaps = 15/402 (3%) Query: 8 EGSLHAENVSLEKLAHVVQ--TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 G L + L TP Y Y AI++ + + YA+KAN NQ Sbjct: 30 NGRLLHGSEPLGDWLKRSGQSTPAYVYHLAAIDQQVAVVRAVLP-SNLHLHYAIKANPNQ 88 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +I+ L+ G D S E+++ +A D+ S N E Sbjct: 89 RIIQHLSRQIDGFDCASLAEMQQIIAIAPDKAAQASIAGPAKSDDELAFAISHGILINAE 148 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 S +EL+ + A ++A +A R+NP + K+ G + Sbjct: 149 SANELRRIQALAAQKKQRARVALRINPPFEVKGSGMKMGGGARPFGIDSEDIPTLIRQWQ 208 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIA 243 A T + + G ++ GSQ + F+ DL +L +H+++GGG G+ Sbjct: 209 AETSSWIDLEGFHLYTGSQNRDATALGAGFRAAMDLIIELSQACDFTPRHLNLGGGFGVV 268 Query: 244 YHSDHRPPSSSDYAS-----LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 YH P + ++ LE GR+LVA GI +T+++ K S Sbjct: 269 YHPQDAPLDLAALQPALLEVSATAQTHWPGVRLNLELGRYLVAGAGIYLTRIVDKKTSRG 328 Query: 299 KTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 KT+++ D M+ + ++ D+ GP+C D + N Sbjct: 329 KTYLLCDGGMHHHLALSGNLGQILRRNWPIIAIDQLNAPCTHPFDLAGPLCTPLDVLGQN 388 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNG 395 +++ D++ + ++GAYG S + S E + Sbjct: 389 QELPELAVSDVIGVLQSGAYGLSASPNGFLSHPACGEYFLRD 430 >gi|319406162|emb|CBI79799.1| lysine/ornithine decarboxylase [Bartonella sp. AR 15-3] Length = 377 Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats. Identities = 92/365 (25%), Positives = 142/365 (38%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + +NYL F A + YA+KAN +++ L LGS D S E+ Sbjct: 18 PCLVVDLDVVHENYLNFEKALPQS--RIFYAIKANPAPEILRLLVSLGSSFDAASIAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A A+RI F K +I A G+ + V+ E++ + A + Sbjct: 76 MALEAGATADRISFGNTIKKERDIARAYAFGVSLYAVDCFEEVEKVA----CAAPGARVF 131 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RV D KFG + YA L ++ GV H+GSQ + Sbjct: 132 CRVLTDGEGAEWP------LSQKFGCVPSMAVDVLRYAHHLG-LQACGVSFHVGSQQTDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 ++ +A + + L G +Q +++GGG Y D + A +YFG Sbjct: 185 NAWDRALSDTAFVFRSLEQEGIQLQLVNMGGGFPTRYLKDIPTVQTYGMAIFDSLKKYFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ T+V+ I K A V I Y Sbjct: 245 NRIPETIIEPGRAMVGNAGVIRTEVVLISKKATSDNVRWVYLDVGKFNGLTETMDEAIRY 304 Query: 326 IVNPA-GDRLHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 + A D+ + GP C++ D + + L GD L I TGAY + Sbjct: 305 PIETAYDDKAMEPCILAGPTCDSADIMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|227823450|ref|YP_002827423.1| ornithine decarboxylase SpeF [Sinorhizobium fredii NGR234] gi|227342452|gb|ACP26670.1| ornithine decarboxylase SpeF [Sinorhizobium fredii NGR234] Length = 377 Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats. Identities = 90/373 (24%), Positives = 148/373 (39%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F +A D+ + YA+KAN +++ LA LGS D S E+ Sbjct: 18 PCLVVDLDIVRDNFKAFRHALP--DSAIYYAVKANPAPEILRLLAGLGSNFDCASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A RI + K +I A GI F V+S E++ + + A + Sbjct: 76 MALEAGATPSRISYGNTIKKERDIARAHALGINLFAVDSHEEVEKVARAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L V GV H+GSQ+ ++ Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLVS-YGVSFHVGSQMTKL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 +++ A + + QL G ++ +++GGG Y D + A ++FG Sbjct: 185 DAWDAALADAKRVFGQLDKQGIELKMVNMGGGFPTKYLRDVPSAEAYGQAIFGALKKHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ + K +D I Y Sbjct: 245 NNIPETIIEPGRGMVGNAGVIKAEVVLVSKKSDNDSHRWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDRLH-IHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + A D + GP C++ D + LP GD + IE TGAY S Sbjct: 305 PIRTARDADEMEPCVLAGPTCDSADVLYEKNMYPLPISLTIGDEVLIEGTGAYTTTYSAV 364 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 365 AFNGFEPLKAYVI 377 >gi|257484348|ref|ZP_05638389.1| hypothetical protein PsyrptA_13912 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008402|gb|EGH88458.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 402 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 85/386 (22%), Positives = 149/386 (38%), Gaps = 12/386 (3%) Query: 22 AHVVQT-PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 A ++T P + Y A++++ A + YA+KANS +++TLA L SG Sbjct: 15 AQALETDPLAAFVYDLDALQQHVTDVMAALP-AGVELYYAIKANSEALMLETLAPLVSGF 73 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 +I S GE+ R A + VFSG GK ++ AL + + ++ES +E+ L A Sbjct: 74 EISSGGEIERV-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAE 132 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 G+ P+ R+NP + A K++ FGI + + + + G + Sbjct: 133 ETGRMQPVFLRINPQLPAAQSSKLAMAGTATPFGIDETDLAEAIRRVDSASHLTLKGFHV 192 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI--DVGGGLGIAYHSDHRPPSSSDY 256 H S +E + Q+ ++ + + GG + + + Sbjct: 193 HAMSHQMSVERHEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRL 252 Query: 257 ASLIHQYFGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + G + I EPGRF+ A G +V+ K S + F++ + F P Sbjct: 253 CRYLEKRLGEQRDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLP 312 Query: 315 TLYDAYHE--INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 H G +VG +C D ++ + + GDLL + G Sbjct: 313 VAQGHDHPVIHVPCAPATGASEEQAYTVVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAG 372 Query: 373 AYGAVQSG-TYNSRLLIPEIMVNGSQ 397 AYG S + + V + Sbjct: 373 AYGYNISHVDFLCHPRPVQHFVRNGE 398 >gi|330981825|gb|EGH79928.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 402 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 87/386 (22%), Positives = 154/386 (39%), Gaps = 17/386 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + Y A++++ A + YA+KANS +++T+A L SG +I S GE+ R Sbjct: 25 AFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETIAPLVSGFEISSGGEIER 83 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A + VFSG GK ++ AL + + ++ES +E+ L Q A G+ P+ Sbjct: 84 V-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGRVQPVFL 142 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+NP + A +++ FGI + + + G +H S +E Sbjct: 143 RINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLMLKGFHVHAMSHQMSVE 202 Query: 209 SFHKAFKLLRDLTQQLR---SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + Q+ + + + H +VGGG+G+ Y + + + + G Sbjct: 203 RHEQLLDFYLQRWQEWKALARDPGQLTHFNVGGGIGVDYL-NSQQFDWQRLCRYLEKRLG 261 Query: 266 NLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 I EPGRF+ A G +V+ K S + F++ + F P H + Sbjct: 262 EQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQSHDHPV 321 Query: 324 NY--IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA--VQS 379 + + + IVG +C D ++ + + GDLL + GAYG + Sbjct: 322 IHLPTAPQSTESSEQAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGYNISHA 381 Query: 380 GTYNSRLLIPEIMVNGSQFHIIRPRM 405 + + V + R R Sbjct: 382 -DFLCHPRPSQHFVRNGE----RVRQ 402 >gi|218462257|ref|ZP_03502348.1| probable ornithine decarboxylase protein [Rhizobium etli Kim 5] Length = 377 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 91/373 (24%), Positives = 148/373 (39%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F +A D+ + YA+KAN V+K LA LGS D S E+ Sbjct: 18 PCLVVDLDVVRDNFQAFRHAMP--DSAIYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A A RI F K ++ A G+ F V+S E++ +++ A + Sbjct: 76 MALDAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L GV H+GSQ+ ++ Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLQS-YGVSFHVGSQMTKV 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ A + + L G ++Q +++GGG Y D + + +FG Sbjct: 185 DAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I K +D I Y Sbjct: 245 NQIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDRLH-IHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D I GP C++ D + + LP GD + IE TGAY S Sbjct: 305 PIRTEHDGDEMEPCVIAGPTCDSADVLYEKKLYPLPISLSIGDEVLIEGTGAYTTTYSAV 364 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 365 AFNGFEPLKAYVI 377 >gi|239943147|ref|ZP_04695084.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 15998] gi|239989605|ref|ZP_04710269.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 11379] gi|291446623|ref|ZP_06586013.1| decarboxylase [Streptomyces roseosporus NRRL 15998] gi|291349570|gb|EFE76474.1| decarboxylase [Streptomyces roseosporus NRRL 15998] Length = 442 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 84/401 (20%), Positives = 147/401 (36%), Gaps = 23/401 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ L +P Y Y E + A + + Y+LKAN + + + L G Sbjct: 9 NIADLVETYGSPLYVYDLDETEAAARSLRGALPQ-PSTLYYSLKANPHPLLARALRRAGC 67 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 ++ S+GEL AL A + I+++G GKT EI A+ +G+ F+VES + + + Sbjct: 68 HAEVSSQGELAAALEAGFAGDEILYTGPGKTRLEIADAVCAGVLRFSVESAGDYRRVAAV 127 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A G A R+ ++ + +FG + + + PG ++ G+ Sbjct: 128 AAERGVTAQCLLRL-NASESHGSSGLRMTGTSSQFGTDSAAVIADPEQFAPRPGARVIGM 186 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGIAYHSDHRPPSSSD 255 S ES + ++ ++D+GGG Y ++ P Sbjct: 187 HFFALSNARDPESLLASLVSSIAEAARVHQACGVPLAYVDLGGGFAAPYAAEGARPDYGA 246 Query: 256 YASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + E GR LV G LV V IK+S ++T+V+LD + Sbjct: 247 LREPLEAALDEHLPDWRNGTTTIAFESGRHLVGGCGQLVCTVSDIKQSRERTYVVLDTGI 306 Query: 309 NDFMRPTLYDAYHEI-----NYIVNPAGDRLHIHA-------DIVGPICETGDFIALNRK 356 + + + +VGP+C D +A + Sbjct: 307 HHLGGLAGLGRLLPMRASTVPARTGGVPGEPDVPYGAADDRAVLVGPLCTPADVLARDAS 366 Query: 357 IALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVNGS 396 + LL + GAYG S + SR + EI++ Sbjct: 367 LPRVGRDGLLTVPNVGAYGLTASLIGFLSRPVAAEIVLAAG 407 >gi|254993002|ref|ZP_05275192.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J2-064] Length = 282 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 79/279 (28%), Positives = 127/279 (45%), Gaps = 13/279 (4%) Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY---ASTLPGVKISGVDMHIGSQI 204 RV P I A+TH I TG+ + KFG + + A + G+ HIGSQI Sbjct: 2 IRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQI 61 Query: 205 DQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + F A + + D + G + + +++GGG G+ Y ++ P S+Y I Sbjct: 62 FETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDE 121 Query: 264 -------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-KTFVILDVAMNDFMRPT 315 +I +EPGR LV + G + KV S K+ + ++ +D M+D +RP Sbjct: 122 VRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRPA 181 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 LYDA+++ NP I G CE+GD + + + G++L + TGAYG Sbjct: 182 LYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGAYG 240 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YN P + V +I R T++ L++ D Sbjct: 241 YAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQND 279 >gi|7021323|gb|AAF35284.1|AF179245_1 ornithine decarboxylase [Coccidioides posadasii] Length = 447 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 84/375 (22%), Positives = 137/375 (36%), Gaps = 35/375 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + ++ + + YA+K N + V++ +AHLG+G D S+ E+ Sbjct: 71 PFYVADLGEVYRQHIRWKMNLGRVKP--FYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 128 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 LAA RI+++ KT + A Q G+ ++ EL + I Sbjct: 129 YVLAAGSTPSRIIYAHPCKTKSYLRYAAQQGVNEMTFDNADELYKIKTMCPDRDVFLRIL 188 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S + KFG + SL A L + + GV H+GS + Sbjct: 189 ----------TDDSASLCRLSMKFGASLTVTRSLLELAKDLG-LNVVGVSFHVGSGAEDQ 237 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + F KA + R + Q GH+++ +DVGGG S + Sbjct: 238 QHFVKAVEDARFVFDQASDIGHDLKVLDVGGGFCDETFERFAAALSDAL-----DTYFPP 292 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKK-------------SADKTFVILDVAMNDFMRP 314 ++I EPGR+ VA L VI+ + A+ + L+ Sbjct: 293 HIRVIAEPGRYYVASAFTLAANVIARRDVSPAASDSDSASGPAEMYMIYLNDGCYGNFSN 352 Query: 315 TLYDAYHE--INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL--PRPGDLLYIEK 370 ++D H + + I GP C+ D I + G+ LY E Sbjct: 353 IVFDHQHPVAQILTKDDMDSTHPVEYSIWGPTCDGIDVITKRVTLNREVLGVGNWLYFEN 412 Query: 371 TGAYGAVQSGTYNSR 385 GAY + +N Sbjct: 413 MGAYTQCSATRFNGF 427 >gi|330879043|gb|EGH13192.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 402 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 84/380 (22%), Positives = 150/380 (39%), Gaps = 13/380 (3%) Query: 28 PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 P + Y A++++ A + YA+KANS +++TLA L SG +I S GE Sbjct: 22 PLATFIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGE 80 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + R A + VFSG GK ++ AL + + ++ES +E++ L A G+ P Sbjct: 81 IERV-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEQTGRVQP 139 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R+NP + A K++ FGI + + + + G +H S Sbjct: 140 VFIRINPQLPAAQSSKLAMAGTATPFGIDEADLAEAVRLVDSATHLTLKGFHVHAMSHQM 199 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHI--DVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 +E + Q ++ +H+ GG + + + + + Sbjct: 200 SVERHEQLLDFYLQRWQAWKALARYPEHLTHFNVGGGIGVDYLNTQQFDWQRLCRYLEKR 259 Query: 264 FGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 G I EPGRF+ A G V +V+ K S + F++ + F P H Sbjct: 260 LGEQPDAPILRFEPGRFISAYCGYYVIEVLDRKTSHGEHFLVCRGGTHQFRLPVAQSHDH 319 Query: 322 EINYIVNPAGDRL--HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA--V 377 + ++ + +VG +C D ++ + + GDLL + GAYG Sbjct: 320 PVIHLPSVPPTAASSEQAYTVVGQLCTPKDVLSRRQPFSGVNIGDLLVLPMAGAYGYNIS 379 Query: 378 QSGTYNSRLLIPEIMVNGSQ 397 + + P+ V + Sbjct: 380 HA-DFLCHPRPPQHFVRNGE 398 >gi|312879707|ref|ZP_07739507.1| ornithine decarboxylase [Aminomonas paucivorans DSM 12260] gi|310782998|gb|EFQ23396.1| ornithine decarboxylase [Aminomonas paucivorans DSM 12260] Length = 392 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 103/379 (27%), Positives = 148/379 (39%), Gaps = 23/379 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L+ A QTPF I + Y YA+KAN +++++K LA GS Sbjct: 21 ALKAFAATKQTPFLLIDLGRIAERYDELVREMSF--ARPFYAVKANPHESILKLLAARGS 78 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S EL + LA V ERI + K +I A GI F +SES+L+ + + Sbjct: 79 SFDVASVYELDQMLALGVEPERISYGNTIKKARDIAYAYHKGIRLFATDSESDLRKIAEN 138 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + KFG I+ L ++ LP V+ GV Sbjct: 139 APGSKVFYRILSDCSGA----------DWPLSRKFGTHPDSIYRLIGLSTRLP-VQPYGV 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GSQ I + R L R ++ I++GGGL Y P + Y Sbjct: 188 SFHVGSQQRDIGQWGYLISTCRYLFDSAREFNVELKMINLGGGLPAQYFDP--TPPIALY 245 Query: 257 ASLIHQYFGNLQ----CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 AS I ++ +I +EPGR +V D GILVT+V+ I K + Sbjct: 246 ASEIRRFLEEDFGKDLPEIFIEPGRGMVGDAGILVTEVVLISKKSQVNPYSWVYLDTGKF 305 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIE 369 + I Y V + GP C++ D + K LP GD +Y Sbjct: 306 GGLIETLDEAIKYPVYVDKKGPSQKVILAGPTCDSVDVLYEQFKYELPVTLAEGDRVYFL 365 Query: 370 KTGAYGAVQSG-TYNSRLL 387 TGAY A +N Sbjct: 366 STGAYTASYCSVNFNGFPP 384 >gi|296446216|ref|ZP_06888163.1| Orn/DAP/Arg decarboxylase 2 [Methylosinus trichosporium OB3b] gi|296256253|gb|EFH03333.1| Orn/DAP/Arg decarboxylase 2 [Methylosinus trichosporium OB3b] Length = 380 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 88/367 (23%), Positives = 139/367 (37%), Gaps = 20/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY +F+ A DT V YA+KAN V+ LA LGS D S E+ Sbjct: 21 PCLVVDLDIVRDNYQSFARALP--DTRVFYAVKANPAPEVLALLARLGSCFDTASVVEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + LAA +RI F K +I A G+ F V+ E+E++ + + A I Sbjct: 79 QTLAAGATPDRISFGNTIKKERDIARAYALGVRLFAVDCEAEVEKIARAAPGARVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + +A L GV H+GSQ Sbjct: 139 CD----------GDGAEWPLSRKFGCAPQMAPRVLEHAHRLGLT-AYGVSFHVGSQQRDP 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QYFG 265 + A K ++ L G +Q +++GGG Y + + A ++FG Sbjct: 188 GMWDGALKSAAEIFNDLAERGIQLQMVNLGGGFPTKYLKNVPVVKAYGQAIFRALSKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ + + +D V I Y Sbjct: 248 NRIPETIIEPGRGMVGNAGVIEAEVVLVSRKSDDDPVRWVYLDIGKFNGLAETTDEMIRY 307 Query: 326 IVNPAGDRL-HIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 + D + GP C++ D + + + G + IE TGAY S Sbjct: 308 PIRTEADGDATAPCVLAGPSCDSIDVLYEKDPYLLPIGLEIGSKVLIEGTGAYTTTYSSV 367 Query: 382 -YNSRLL 387 +N Sbjct: 368 GFNGFPP 374 >gi|154246083|ref|YP_001417041.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2] gi|154160168|gb|ABS67384.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2] Length = 376 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 145/373 (38%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY F+ A DT V YA+KAN + A+++ L LGS D S GE+ Sbjct: 17 PCVVVDLDVVRTNYQAFARALP--DTRVYYAVKANPDAAILQALEELGSSFDCASVGEIE 74 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 LA AERI F K +I+ A + G+ F V+S E + + + A I Sbjct: 75 MVLATGAGAERISFGNTIKKERDIERAFRLGVRLFAVDSYEEAEKIARVAPHAKVFCRIL 134 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 A KFG + +A L GV H+GSQ + Sbjct: 135 CD-----GAGA-----EWPLSRKFGCEPEMAADVLEHAHRLGLA-AYGVSFHVGSQQKNV 183 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 ++ A + + G ++ +++GGG Y + S S + ++FG Sbjct: 184 HAWDGALASAAQIFRACAERGISLSMVNLGGGFPTRYLQEVPGAQSYGEAIFSSLRKHFG 243 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I K ++ + I Y Sbjct: 244 NQVPETIMEPGRGMVGNAGLIEAEVVLISKKSEADAMRWVYLDIGKFGGLAETMDEAIRY 303 Query: 326 IVNPAGDR-LHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 + D + GP C++ D + ++ L GD + IE GAY S Sbjct: 304 PLRTPRDGDDTAPCVLAGPTCDSADVMYEKTPVELPLSLSIGDKVIIEACGAYTTTYSAV 363 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 364 AFNGFPPLKSYVI 376 >gi|210613857|ref|ZP_03289951.1| hypothetical protein CLONEX_02164 [Clostridium nexile DSM 1787] gi|210150948|gb|EEA81956.1| hypothetical protein CLONEX_02164 [Clostridium nexile DSM 1787] Length = 378 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 116/392 (29%), Gaps = 25/392 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + + TP Y + +N D + A KA S V +A SG Sbjct: 4 NELPTPCYVIQEEQLRQNLEILKGVMDRTGCKILLAQKAFSMYEVYPLIAQYLSGTTASG 63 Query: 83 EGELRRALAAPVPA---ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 E R E +FS K + ++ FN + E Sbjct: 64 LYEARLGAEEMGIPFGKETHIFSPAYKEEEFDEILTYCDHIVFNSFEQLERFGKRAAEAG 123 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 I + + H+ + G+ I + ++ Sbjct: 124 KSVGLRINPQYSTQ---EGHEIYDPCATGSRLGVTIEKFRP-----------ELLEYVDG 169 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 + + L+++ +Q ++ ++ GGG I Sbjct: 170 LHFHALCEQDAQPLHDTLKEVERQFGEWLPKMKWLNFGGGHHITREGYDIAL----LERC 225 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 I +I LEPG + + G+L+TKV + + + + P + + Sbjct: 226 ICDMKEKYDLEIFLEPGEAVALNAGVLLTKV--EEIVENSIQIAILDTSAACHMPDVLEM 283 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + + + GP C GD I + GD L E Y V++ Sbjct: 284 PYRPPLQDGYEAEEKAYTYRLAGPTCLAGDVIGDYSFAEPLKRGDTLTFEDMAIYTMVKN 343 Query: 380 GTYNSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 T+N L ++ + + ++R +++ Sbjct: 344 NTFNGMRLPAIVLEDKDGECRVVRQ-FGYEDF 374 >gi|307130373|ref|YP_003882389.1| diaminopimelate decarboxylase [Dickeya dadantii 3937] gi|306527902|gb|ADM97832.1| Diaminopimelate decarboxylase [Dickeya dadantii 3937] Length = 411 Score = 149 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 90/388 (23%), Positives = 153/388 (39%), Gaps = 16/388 (4%) Query: 12 HAENVSLEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 H +V + L P + Y TA+ ++ A + YA+KANS + ++ Sbjct: 7 HVHDVIVL-LQQQHTDPLAAFVYDLTALRQHVSEVMAALP-PGVELYYAIKANSEKPILD 64 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 +A L G +I S GE+ R + VFSG GK + DLAL+ G+ +VES E Sbjct: 65 AIAPLVHGFEISSGGEIARVAGCGTR-KPFVFSGPGKLDSDFDLALEQGVEAVHVESRHE 123 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + L QRA G P+ RVNP++ ++ K++ FG+ + Sbjct: 124 IARLQQRARQHGVVQPVFIRVNPELASSLTSKLAMAGTPTPFGMDEADLADAVRDVDNAS 183 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID-----VGGGLGIAY 244 +++ G +H S + + L Q ++ + QHI G G+ Sbjct: 184 HLQLKGFHVHAMSHQMVVARHQQLLDLYLTRWPQWKALSAHPQHITHLNVGGGIGVPYLT 243 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 P+ DY + EPGRF+ A G +V+ K+S K F++ Sbjct: 244 PERFDWPALCDY-LRTRLAQQPDAPIVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVC 302 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGD--RLHIHADIVGPICETGDFIALNRKIALPRP 362 + F P H + ++ + +VG +C D ++ ++++ Sbjct: 303 RGGTHQFRLPVAQGHDHPVIHLPLTSAPTTGETRDWTVVGQLCTPKDVLSRDQRLTDVNI 362 Query: 363 GDLLYIEKTGAYGA--VQSGTYNSRLLI 388 GDLL + GAYG + + Sbjct: 363 GDLLVLPLAGAYGYNISHA-DFLCHPRP 389 >gi|134097855|ref|YP_001103516.1| Orn/DAP/Arg decarboxylase 2 [Saccharopolyspora erythraea NRRL 2338] gi|291005509|ref|ZP_06563482.1| Orn/DAP/Arg decarboxylase 2 [Saccharopolyspora erythraea NRRL 2338] gi|133910478|emb|CAM00591.1| Orn/DAP/Arg decarboxylase 2 [Saccharopolyspora erythraea NRRL 2338] Length = 402 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 91/377 (24%), Positives = 153/377 (40%), Gaps = 19/377 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP A+ +NY +A D +CYA+KAN V+ TLA LGS D+ S GE+ Sbjct: 37 TPCLVVDLAAVRRNYQALRSALP--DARICYAVKANPAPEVVATLAALGSSFDVASPGEI 94 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 LA E I + K +I A + G+ F +SE++L + + A + Sbjct: 95 DLCLAQGASPESISYGNTIKKPRDIARAHRLGVRLFVTDSEADLLNIAESAPGSQVFCRV 154 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 K S KFG L A+ L + GV HIGSQ Sbjct: 155 LVD----------NKGSRTPFGRKFGCTPQTAVRLLRRAAELG-LDPYGVSFHIGSQQLD 203 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYF 264 ++ + R++ L +G + +++GGGL +Y P + ++F Sbjct: 204 PSAWEHGIRAAREVFDGLAEHGVTPRMVNLGGGLPASYTESAPPLGDYAEHIERALDRHF 263 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 G + ++++EPGR +V D G+L T+V+ + SA + + + + + Sbjct: 264 GARRPELLIEPGRQVVGDAGVLRTEVVLVTASAGDDRRWVYLDVGRYNGLAETEGEAITY 323 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 + + GP C+ D + + + L R GD + + GAY A S Sbjct: 324 RLRTSRDGDECGPVVLAGPTCDGDDVLYQHTRYDLPLTLRGGDRVDLLSAGAYTASYSSV 383 Query: 382 -YNSRLLIPEIMVNGSQ 397 +N +P ++G + Sbjct: 384 CFNGIAPLPTHCIDGDE 400 >gi|110635049|ref|YP_675257.1| ornithine decarboxylase [Mesorhizobium sp. BNC1] gi|110286033|gb|ABG64092.1| ornithine decarboxylase [Chelativorans sp. BNC1] Length = 377 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 90/365 (24%), Positives = 143/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NYL F A D+ + YA+KAN +++ L LGS D S E+ Sbjct: 18 PCLVVDLDVVRDNYLAFERALP--DSRIYYAVKANPAPQILRLLTSLGSSFDTASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A +RI + K +I A GI F V+S E++ +++ A + Sbjct: 76 MALDAGATPDRISYGNTIKKERDIARAFALGIRLFAVDSTEEVEKISRAAPGSKVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + KFG + A L ++ GV H+GSQ + Sbjct: 136 ----------TDGAGAEWPLSRKFGCVPAMAVDVLRRAKQLG-LEPYGVSFHVGSQQTDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 ++ +A R + L G ++ +++GGG Y D + A ++FG Sbjct: 185 SAWDRALSDARMVFAALADEGIVLRMVNMGGGFPTRYLRDVPEAQAYGQAIFSSLRKHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ ++V+ I K AD V I Y Sbjct: 245 NRIPETIIEPGRGMVGNAGVIKSEVVLISKKADNDNVRWVYLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDR-LHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + GP C++ D + LP GD + IE TGAY + Sbjct: 305 PLVTRHDGSETTPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEVLIEGTGAYTTTYASV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|290969752|ref|XP_002667945.1| predicted protein [Naegleria gruberi] gi|284080827|gb|EFC35201.1| predicted protein [Naegleria gruberi] Length = 144 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 58/145 (40%), Positives = 91/145 (62%), Gaps = 3/145 (2%) Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 + EPGR +V + G+L+T+V +K +K F ++D AMND MRP +Y+A+H + + AG Sbjct: 1 MFEPGRSVVGNAGLLLTEVQYLKHGEEKNFAVVDAAMNDLMRPAMYEAWHGVQTVKENAG 60 Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 D+VGP+CE+GD++A +R++A GDLL + GAYG + YN+R E+ Sbjct: 61 QPR--IYDVVGPVCESGDWLARSRELA-IHEGDLLALMSAGAYGMTMASNYNTRGRAAEV 117 Query: 392 MVNGSQFHIIRPRMTFQELIELDSI 416 +V+GSQ H++R R +L L+ I Sbjct: 118 LVDGSQVHLVRARENPADLFALEKI 142 >gi|255023266|ref|ZP_05295252.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-208] Length = 283 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 85/260 (32%), Positives = 122/260 (46%), Gaps = 6/260 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 EG L V KL TP Y Y I F F+ G+ V YA KA S Sbjct: 14 EGHLEIGGVDTLKLTEKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAV 73 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ + +A G LD+VS GEL A+ A P ERI F G K+ +EI +AL GI CF ++ Sbjct: 74 AIYQLMAEEGLSLDVVSGGELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVID 133 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY- 184 + E+ L + +KA + RV P I A+TH I TG+ + KFG + + A Sbjct: 134 NYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIK 193 Query: 185 --ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLG 241 + G+ HIGSQI + F A + + D + G + + +++GGG G Sbjct: 194 QVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFG 253 Query: 242 IAYHSDHRPPSSSDYASLIH 261 + Y ++ P S+Y I Sbjct: 254 VRYTAEDEPLEPSEYVCQIM 273 >gi|150397970|ref|YP_001328437.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium medicae WSM419] gi|150029485|gb|ABR61602.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium medicae WSM419] Length = 377 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 147/373 (39%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F +A D+ + YA+KAN V++ LA LGS D S E+ Sbjct: 18 PCLVVDLDVVRDNFKAFRHALP--DSAIYYAVKANPAPEVLRLLASLGSNFDCASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A RI + K ++ A GI F V+S E++ + + A + Sbjct: 76 MALDAGATPNRISYGNTIKKERDVARAHTLGISLFAVDSHEEVEKIARAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L GV H+GSQ+ ++ Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLAS-YGVSFHVGSQMTKL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 +++ A + + QL G ++ +++GGG Y D + A ++FG Sbjct: 185 DAWDAALADAKRVFVQLAKQGIELKMVNMGGGFPTKYLRDVPSAEAYGQAIFGALKKHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ + K +D I Y Sbjct: 245 NNIPETIIEPGRGMVGNAGVIKAEVVLVSKKSDNDSHRWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDRL-HIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + A D + GP C++ D + LP GD + IE TGAY S Sbjct: 305 PIRTARDADAMEPCVLAGPTCDSADVLYEKNMYPLPISLTIGDEVLIEGTGAYTTTYSAV 364 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 365 AFNGFEPLKAYVI 377 >gi|326201069|ref|ZP_08190941.1| carboxynorspermidine decarboxylase [Clostridium papyrosolvens DSM 2782] gi|325988637|gb|EGD49461.1| carboxynorspermidine decarboxylase [Clostridium papyrosolvens DSM 2782] Length = 382 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 57/396 (14%), Positives = 123/396 (31%), Gaps = 24/396 (6%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + ++ L TP Y + KN + + A K S +V + Sbjct: 6 GIDIKSL----PTPCYIVDERLLVKNLEILDSIQKRTGCKILLAQKGFSMHSVYPLIGKY 61 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 +G+ S E R + E +++ + ++ S + Sbjct: 62 LAGVTSSSLFEARLGYE-KMGKEVHIYAPAYIEEEFDEIMKYCDH--IVFNSFHQWGKYK 118 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + KK R+NP+ + H K + G+ + Sbjct: 119 GKVKTATKKIGCGIRINPEYSELEHPIYDPCYKFSRLGVTLPNFKPEELEGI-------- 170 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + ++ + ++ + ++ +++ ++ GGG I Sbjct: 171 ---EGLHFHTMCEQNSDTLERTIKVVDEKFGRYIKDMKWLNFGGGHHITRPD----YDIE 223 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 I+ + + LEPG + + G LV KV+ ++ + + P Sbjct: 224 ALVRSINYFQDKYGIDVYLEPGEAVALNTGYLVAKVLDTVENG--MNIAILDTSAACHMP 281 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + N I D + + G C GD I +PGD L Y Sbjct: 282 DVLEMPYRPNIIGAGMPDENLVTYRLGGHTCLAGDIIGDYSFNQKLKPGDRLVFCDMAHY 341 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 V++ T+N L + + + I + +++ Sbjct: 342 SMVKNNTFNGINLPAIALYSEKEGIKIIKQFGYEDF 377 >gi|289627600|ref|ZP_06460554.1| hypothetical protein PsyrpaN_21127 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648756|ref|ZP_06480099.1| hypothetical protein Psyrpa2_13540 [Pseudomonas syringae pv. aesculi str. 2250] gi|330869725|gb|EGH04434.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 402 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 85/386 (22%), Positives = 149/386 (38%), Gaps = 12/386 (3%) Query: 22 AHVVQT-PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 A ++T P + Y A++++ A + YA+KANS +++TLA L SG Sbjct: 15 AQALETDPLAAFVYDLDALQQHVTDVMAALP-AGVELYYAIKANSEALMLETLAPLVSGF 73 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 +I S GE+ R A + VFSG GK ++ AL + + ++ES +E+ L A Sbjct: 74 EISSGGEIERV-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAE 132 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 G+ P+ R+NP + A K++ FGI + + + + G + Sbjct: 133 ETGRVQPVFLRINPQLPAAQSSKLAMAGTATPFGIDETDLAEAIRRVDSASHLTLKGFHV 192 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI--DVGGGLGIAYHSDHRPPSSSDY 256 H S +E + Q+ ++ + + GG + + + Sbjct: 193 HAMSHQMSVERHEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRL 252 Query: 257 ASLIHQYFGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + G + I EPGRF+ A G +V+ K S + F++ + F P Sbjct: 253 CRYLEKRLGEQRDTPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLP 312 Query: 315 TLYDAYHE--INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 H G +VG +C D ++ + + GDLL + G Sbjct: 313 VAQGHDHPVIHVPCAPATGASEEQAYTVVGQLCTPKDVLSRQQPLKGVNIGDLLVLPLAG 372 Query: 373 AYGAVQSG-TYNSRLLIPEIMVNGSQ 397 AYG S + + V + Sbjct: 373 AYGYNISHVDFLCHPRPVQHFVRNGE 398 >gi|42526619|ref|NP_971717.1| pyridoxal-dependent family decarboxylase [Treponema denticola ATCC 35405] gi|41816812|gb|AAS11598.1| decarboxylase, pyridoxal-dependent family [Treponema denticola ATCC 35405] gi|325473161|gb|EGC76357.1| pyridoxal-dependent family Decarboxylase [Treponema denticola F0402] Length = 389 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 95/375 (25%), Positives = 157/375 (41%), Gaps = 22/375 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP + I+KNY F D + YA+KAN ++ +I L +GS DI S Sbjct: 20 ENLETPCVVINLKTIKKNYQKLRENFPYAD--IFYAIKANPHEEIISMLNEMGSCFDIAS 77 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 EL + L V ER+ + K +I + G+ F +S+ +LK + Q A Sbjct: 78 RYELDKVLKLGVSPERLSYGNTIKKAKDIAYFYEKGVRMFATDSKDDLKNIAQFAPGSRV 137 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + KFG + L A + G+ H+GS Sbjct: 138 YVRILVENTTSAD---------WPLSRKFGCHPDMAYDLCIQARDSGLI-PYGISFHVGS 187 Query: 203 QIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASL 259 Q I ++ A + L ++ +++GGG +Y + S + + Sbjct: 188 QQRDIGQWNDAIAKTKYLMDSLEEEEEIKLEMVNMGGGFPASYVTPANDLSEYASEISRY 247 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---KTFVILDVAMNDFMRPTL 316 + FG + +IILEPGR LV D GILVT+V+ I + + +V LD + + + TL Sbjct: 248 LEDDFGEERPRIILEPGRSLVGDSGILVTEVVMISRKNNTALFRWVYLDTGLFNGLIETL 307 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGA 373 ++ G + + GP C++ D + + K +LP +PGD +Y TGA Sbjct: 308 NESLKYPIITDKDEGCKKWGEVVLAGPTCDSMDIMYEDYKYSLPTNLKPGDRVYFLTTGA 367 Query: 374 YGAVQSG-TYNSRLL 387 Y + + +N Sbjct: 368 YTSSYASVEFNGFPP 382 >gi|323140845|ref|ZP_08075758.1| carboxynorspermidine decarboxylase [Phascolarctobacterium sp. YIT 12067] gi|322414583|gb|EFY05389.1| carboxynorspermidine decarboxylase [Phascolarctobacterium sp. YIT 12067] Length = 412 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 109/388 (28%), Gaps = 20/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP Y + N + + A K S + + +G Sbjct: 40 KALPTPCYVVDEAKLLNNLRLLQHVQCESGAHILLAQKCFSMFRLYPLMGEYLAGTTASG 99 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + E VF+ K D +L FN ++ E G Sbjct: 100 IYEARLGHE-EMGKENHVFAPAFKEQDMQELVQICDHIIFNSFAQFEKHK--AVCAQAGV 156 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I H + G+ + + LP + Sbjct: 157 SVGIRVNPECSTQEGEHAIYDPCAYGSRLGVTLANFPQV------LPPEIEGLHFHTLCE 210 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 Q + + ++ +++GGG I L+ Sbjct: 211 QNADD-----LLTTWKAFEAKFSKYFAQLKWLNLGGGHHITRSD----YDVEALIDLVKY 261 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ LEPG + + G LV++V+ I + +++ A P + + + Sbjct: 262 IRATYHVEVYLEPGEAVALNAGYLVSEVLDIVHNG--LDILILDASAACHMPDVLEMPYR 319 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 D + C GD I + GD L E Y V++ T+ Sbjct: 320 PTLRDGYEADEKQYKYRLSSMTCLAGDVIGDYSFDKEIKVGDKLIFEDMAIYSMVKNNTF 379 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 N L ++++ + R +++ Sbjct: 380 NGIPLPDIVLLHKDGTTELVRRFGYEDF 407 >gi|291532659|emb|CBL05772.1| diaminopimelate decarboxylase [Megamonas hypermegale ART12/1] Length = 354 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 77/350 (22%), Positives = 133/350 (38%), Gaps = 15/350 (4%) Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + G+G D S EL A A+ + E+I+ + DE A++ G + Sbjct: 1 MQEEGAGADCSSLPELLLADASGIHGEKIMLTSNDTPADEFQKAIELGAIINLDD----- 55 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 T + + N I +E K+G+ Q+ Y A Sbjct: 56 ITHIEYLEKNAGMPQVMSFRYNPGNLIEGNDIIGKPEEAKYGLTKEQMLEAYKIAMDKGV 115 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + M I ++ A + + G + I++GGG+GI Y + Sbjct: 116 KRFGLHTMVISNETRLEGLLLNAKIVFDLAAEIATKLGIKFEFINLGGGIGIPYRPEDNA 175 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 +H+ + + I E GR + G LV+ V+ K + + ++ Sbjct: 176 VDLEALGEGVHKLYDEILVPAGLTTTAIAYESGRAITGPYGYLVSTVLHQKNT-YRNYIG 234 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 LD M + MRP LY +YH I + H+ D+ G +CE D A++RK+ G Sbjct: 235 LDSCMANLMRPALYGSYHHIVVVGKENEPCDHV-YDVTGSLCENNDKFAIDRKLPKIDIG 293 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 D + + TGA+G YN +L E+++ +IR T ++ Sbjct: 294 DRIIMFDTGAHGHAMGFNYNGKLRSAELLLHEDGSVELIRRAETIEDYFA 343 >gi|269139319|ref|YP_003296020.1| putative diaminopimelate decarboxylase [Edwardsiella tarda EIB202] gi|267984980|gb|ACY84809.1| putative diaminopimelate decarboxylase [Edwardsiella tarda EIB202] gi|304559225|gb|ADM41889.1| Vibrioferrin decarboxylase protein PvsE [Edwardsiella tarda FL6-60] Length = 390 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 83/364 (22%), Positives = 141/364 (38%), Gaps = 10/364 (2%) Query: 18 LEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 +++L TPF Y Y +A+ + T + YA KAN+ ++ TLA Sbjct: 9 IQRLQQRH-TPFCGYLYDLSALRERIATMKRLLPEH-CELFYAAKANAEAPILHTLAPWV 66 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S GEL + R++F G GK E++ A + +VES EL+ L Sbjct: 67 DGFEAASGGELAWLAQQSLD-SRLLFGGPGKLTRELEQACDLRVDALHVESLGELRRLAA 125 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A + P+ R+N + + G K FG+ + +++ G Sbjct: 126 LAERRRQTLPLLLRMNIPLPGGAETPLMMGGKPTPFGLDPADLAPALRLIGDARWLRLRG 185 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSS 254 H+ S ++S + Q+ H I+ +++GGG GI Y R + Sbjct: 186 FHFHLLSHQLSVDSHLALIQHCLTQVQRWCQQFHLQIEMVNLGGGFGINYRDPARHFDWA 245 Query: 255 DYASL---IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 D+ + + + E GR++ A G V +V+ IK++ + F + + F Sbjct: 246 DFCQRLPAVRRACRADPWLLRFECGRYISAPCGYYVMEVLDIKRNLGEWFAVGHGGTHHF 305 Query: 312 MRPTLYDAYHEINYIVNPAGDRLH-IHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 P H + + +VG +C D +A + IA GD L Sbjct: 306 RTPAAQGHDHPFQVVRRDTPPEIRDRRVTLVGQLCTPKDVLARRQPIAALATGDWLVFPL 365 Query: 371 TGAY 374 GAY Sbjct: 366 AGAY 369 >gi|33945616|emb|CAD91349.1| ornithine decarboxylase [Glycine max] Length = 434 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 71/378 (18%), Positives = 133/378 (35%), Gaps = 26/378 (6%) Query: 21 LAHV--VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +A + TPF + + A YA+K N N ++I LA LGS Sbjct: 51 IADKPDIDTPFSVLDLGVVMGLMDQW--ACKLPTVQPFYAVKCNPNLSLIGALAALGSSF 108 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S+ E+ L+ V +RI+++ K+ I A G+ +S E++ + + Sbjct: 109 DCASKAEIESVLSLGVSPDRIIYANPCKSESHIRYAASVGVNVTTYDSIDEVEKIRKCHP 168 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + + D A T + G ++ + A+ G+K++GV Sbjct: 169 TCEL--LLRIKPPQDSGARTSLGLKYGALPEEVDELLQ--------AAHEAGLKVTGVSF 218 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 HIGS ++H A +++ + G + GG + S + A Sbjct: 219 HIGSGGADTRAYHGAISAAKNVFESASRLGLPRMGVLDIGGGFTSGPSFEAAALKINAAI 278 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + +I EPGR+ L T+VI + D +D + + ++D Sbjct: 279 EG-SFGKEEGLVVIGEPGRYFAETAFTLATRVIGKRVRGDVREYWIDDGIYGTLNNIVFD 337 Query: 319 AYHEINYIVNPAGDRL-----------HIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 + + + GP C++ D + + ++ + D L Sbjct: 338 YATVTCMPLACTSKPENPTCCRDLNLKTYPSTVFGPTCDSIDTVLRDYQLPELQVNDWLV 397 Query: 368 IEKTGAYGAVQSGTYNSR 385 GAY +N Sbjct: 398 FPNMGAYTTSSGTNFNGF 415 >gi|17989478|ref|NP_542111.1| ornithine decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|225685964|ref|YP_002733936.1| Lysine/ornithine decarboxylase [Brucella melitensis ATCC 23457] gi|256043023|ref|ZP_05445969.1| Lysine/ornithine decarboxylase [Brucella melitensis bv. 1 str. Rev.1] gi|256111987|ref|ZP_05452938.1| Lysine/ornithine decarboxylase [Brucella melitensis bv. 3 str. Ether] gi|256262911|ref|ZP_05465443.1| orn/DAP/Arg decarboxylase [Brucella melitensis bv. 2 str. 63/9] gi|260564257|ref|ZP_05834742.1| orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis bv. 1 str. 16M] gi|265989462|ref|ZP_06102019.1| orn/DAP/Arg decarboxylase 2 [Brucella melitensis bv. 1 str. Rev.1] gi|265993438|ref|ZP_06105995.1| orn/DAP/Arg decarboxylase 2 [Brucella melitensis bv. 3 str. Ether] gi|17985359|gb|AAL54375.1| ornithine decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|225642069|gb|ACO01982.1| Lysine/ornithine decarboxylase [Brucella melitensis ATCC 23457] gi|260151900|gb|EEW86993.1| orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis bv. 1 str. 16M] gi|262764308|gb|EEZ10340.1| orn/DAP/Arg decarboxylase 2 [Brucella melitensis bv. 3 str. Ether] gi|263000131|gb|EEZ12821.1| orn/DAP/Arg decarboxylase 2 [Brucella melitensis bv. 1 str. Rev.1] gi|263092749|gb|EEZ16958.1| orn/DAP/Arg decarboxylase [Brucella melitensis bv. 2 str. 63/9] gi|326410285|gb|ADZ67349.1| Lysine/ornithine decarboxylase [Brucella melitensis M28] gi|326553578|gb|ADZ88217.1| Lysine/ornithine decarboxylase [Brucella melitensis M5-90] Length = 377 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 86/365 (23%), Positives = 143/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P T + +NY F A + YA+KAN +++ LA LGS D S E+ Sbjct: 18 PCLVVDTDVVRENYQGFEKALPYS--RIFYAVKANPAPEILRLLASLGSSFDTASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A +RI + K +I A GI + V+ E++ + + A + Sbjct: 76 MALEAGATPDRISYGNTIKKERDIARAFDLGIRLYAVDCVEEVEKIARVAPGSRVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + A L + GV H+GSQ + Sbjct: 136 ----------TDGEGAKWPLSRKFGCVPAMAKDVLRRAKALG-LDAYGVSFHVGSQQTDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QYFG 265 ++ +A + + L G ++ +++GGG Y D + A ++FG Sbjct: 185 TAWDRALADAAAVFRTLADEGIILRMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSRHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVI-SIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 N + I+EPGR +V + G++ T+V+ +K+ + + + + F Sbjct: 245 NRIPETIIEPGRGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRY 304 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 IV P + GP C++ D + LP GD + IE TGAY S Sbjct: 305 QIVTPHDGSETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|23499865|ref|NP_699305.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Brucella suis 1330] gi|62317058|ref|YP_222911.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Brucella abortus bv. 1 str. 9-941] gi|83269051|ref|YP_418342.1| Orn/DAP/Arg decarboxylase family protein [Brucella melitensis biovar Abortus 2308] gi|148558692|ref|YP_001257169.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Brucella ovis ATCC 25840] gi|161620188|ref|YP_001594074.1| lysine/ornithine decarboxylase [Brucella canis ATCC 23365] gi|163844298|ref|YP_001621953.1| hypothetical protein BSUIS_B0106 [Brucella suis ATCC 23445] gi|189022323|ref|YP_001932064.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus S19] gi|225628577|ref|ZP_03786611.1| Lysine/ornithine decarboxylase [Brucella ceti str. Cudo] gi|237816619|ref|ZP_04595611.1| Lysine/ornithine decarboxylase [Brucella abortus str. 2308 A] gi|254691458|ref|ZP_05154712.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 6 str. 870] gi|254698345|ref|ZP_05160173.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 2 str. 86/8/59] gi|254702533|ref|ZP_05164361.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 3 str. 686] gi|254706342|ref|ZP_05168170.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis M163/99/10] gi|254711368|ref|ZP_05173179.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis B2/94] gi|254711967|ref|ZP_05173778.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M644/93/1] gi|254715037|ref|ZP_05176848.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M13/05/1] gi|254720654|ref|ZP_05182465.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella sp. 83/13] gi|254731788|ref|ZP_05190366.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 4 str. 292] gi|256014892|ref|YP_003104901.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Brucella microti CCM 4915] gi|256030002|ref|ZP_05443616.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis M292/94/1] gi|256059653|ref|ZP_05449850.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella neotomae 5K33] gi|256158166|ref|ZP_05456082.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M490/95/1] gi|256252883|ref|ZP_05458419.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti B1/94] gi|256256643|ref|ZP_05462179.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 9 str. C68] gi|260166947|ref|ZP_05753758.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Brucella sp. F5/99] gi|260544294|ref|ZP_05820115.1| orn/DAP/Arg decarboxylase, family 2 [Brucella abortus NCTC 8038] gi|260568562|ref|ZP_05839031.1| orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 4 str. 40] gi|260757077|ref|ZP_05869425.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 6 str. 870] gi|260759553|ref|ZP_05871901.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 4 str. 292] gi|260762798|ref|ZP_05875130.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 2 str. 86/8/59] gi|260882887|ref|ZP_05894501.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 9 str. C68] gi|261216741|ref|ZP_05931022.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M13/05/1] gi|261219971|ref|ZP_05934252.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti B1/94] gi|261313787|ref|ZP_05952984.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis M163/99/10] gi|261318973|ref|ZP_05958170.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis B2/94] gi|261319608|ref|ZP_05958805.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M644/93/1] gi|261323625|ref|ZP_05962822.1| orn/DAP/Arg decarboxylase 2 [Brucella neotomae 5K33] gi|261753106|ref|ZP_05996815.1| orn/DAP/Arg decarboxylase 2 [Brucella suis bv. 3 str. 686] gi|261756332|ref|ZP_06000041.1| orn/DAP/Arg decarboxylase [Brucella sp. F5/99] gi|265985700|ref|ZP_06098435.1| orn/DAP/Arg decarboxylase 2 [Brucella sp. 83/13] gi|265987023|ref|ZP_06099580.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis M292/94/1] gi|265996684|ref|ZP_06109241.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M490/95/1] gi|294853126|ref|ZP_06793798.1| ornithine decarboxylase [Brucella sp. NVSL 07-0026] gi|297249998|ref|ZP_06933699.1| ornithine decarboxylase [Brucella abortus bv. 5 str. B3196] gi|306837380|ref|ZP_07470259.1| ornithine decarboxylase [Brucella sp. NF 2653] gi|306841124|ref|ZP_07473842.1| ornithine decarboxylase [Brucella sp. BO2] gi|306845478|ref|ZP_07478051.1| ornithine decarboxylase [Brucella sp. BO1] gi|23463438|gb|AAN33310.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Brucella suis 1330] gi|62197251|gb|AAX75550.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Brucella abortus bv. 1 str. 9-941] gi|82939325|emb|CAJ12264.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis biovar Abortus 2308] gi|148369977|gb|ABQ62849.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Brucella ovis ATCC 25840] gi|161336999|gb|ABX63303.1| Lysine/ornithine decarboxylase [Brucella canis ATCC 23365] gi|163675021|gb|ABY39131.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189020897|gb|ACD73618.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus S19] gi|225616423|gb|EEH13471.1| Lysine/ornithine decarboxylase [Brucella ceti str. Cudo] gi|237787432|gb|EEP61648.1| Lysine/ornithine decarboxylase [Brucella abortus str. 2308 A] gi|255997552|gb|ACU49239.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Brucella microti CCM 4915] gi|260097565|gb|EEW81439.1| orn/DAP/Arg decarboxylase, family 2 [Brucella abortus NCTC 8038] gi|260155227|gb|EEW90308.1| orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 4 str. 40] gi|260669871|gb|EEX56811.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 4 str. 292] gi|260673219|gb|EEX60040.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 2 str. 86/8/59] gi|260677185|gb|EEX64006.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 6 str. 870] gi|260872415|gb|EEX79484.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 9 str. C68] gi|260918555|gb|EEX85208.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti B1/94] gi|260921830|gb|EEX88398.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M13/05/1] gi|261292298|gb|EEX95794.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M644/93/1] gi|261298196|gb|EEY01693.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis B2/94] gi|261299605|gb|EEY03102.1| orn/DAP/Arg decarboxylase 2 [Brucella neotomae 5K33] gi|261302813|gb|EEY06310.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis M163/99/10] gi|261736316|gb|EEY24312.1| orn/DAP/Arg decarboxylase [Brucella sp. F5/99] gi|261742859|gb|EEY30785.1| orn/DAP/Arg decarboxylase 2 [Brucella suis bv. 3 str. 686] gi|262550981|gb|EEZ07142.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M490/95/1] gi|264659220|gb|EEZ29481.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis M292/94/1] gi|264664292|gb|EEZ34553.1| orn/DAP/Arg decarboxylase 2 [Brucella sp. 83/13] gi|294818781|gb|EFG35781.1| ornithine decarboxylase [Brucella sp. NVSL 07-0026] gi|297173867|gb|EFH33231.1| ornithine decarboxylase [Brucella abortus bv. 5 str. B3196] gi|306274129|gb|EFM55948.1| ornithine decarboxylase [Brucella sp. BO1] gi|306288845|gb|EFM60159.1| ornithine decarboxylase [Brucella sp. BO2] gi|306407572|gb|EFM63772.1| ornithine decarboxylase [Brucella sp. NF 2653] Length = 377 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 86/365 (23%), Positives = 143/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P T + +NY F A + YA+KAN +++ LA LGS D S E+ Sbjct: 18 PCLVVDTDVVRENYQGFEKALPYS--RIFYAVKANPAPEILRLLASLGSSFDTASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A +RI + K +I A GI + V+ E++ + + A + Sbjct: 76 MALEAGATPDRISYGNTIKKERDIARAFDLGIRLYAVDCVEEVEKIARVAPGSRVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + A L + GV H+GSQ + Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPAMAKDVLRRAKALG-LDAYGVSFHVGSQQTDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QYFG 265 ++ +A + + L G ++ +++GGG Y D + A ++FG Sbjct: 185 TAWDRALADAAAVFRTLADEGIILRMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSRHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVI-SIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 N + I+EPGR +V + G++ T+V+ +K+ + + + + F Sbjct: 245 NRIPETIIEPGRGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRY 304 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 IV P + GP C++ D + LP GD + IE TGAY S Sbjct: 305 QIVTPHDGSETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|328875253|gb|EGG23618.1| group IV decarboxylase [Dictyostelium fasciculatum] Length = 435 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 84/401 (20%), Positives = 156/401 (38%), Gaps = 21/401 (5%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 Y+ ++ F+G+ TM A+K+N +++K G G ++ S GEL+ A Sbjct: 36 VYNLDHFRALAKESNDRFNGIQTM---AVKSNPVMSLLKEAIKSGLGAEVASFGELKIAE 92 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK---TLNQRAVSLGKKAPIA 147 A ++I++ KTI E++ A+ G+ + + + + I Sbjct: 93 LAGFTPDKIIYDSPIKTIQELEYAINLGVVINVDNFQEMDRVVEIVEKLDEKKKSTLVIG 152 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNP + A + +STG KFGI + T + Sbjct: 153 IRVNPQVQAGKYADLSTGVPTSKFGIGLDDSRERIISYYTQYNWMRGVHLHVGSQGFEMY 212 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ K++ + + + I H++VGGGL + + ++ P+ +DY++ + + L Sbjct: 213 QTSDAVVKVMSLVKEINGLTNNQITHVNVGGGLSVNFDTEQDKPTFTDYSTHLKERIPEL 272 Query: 268 Q---CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +I E GR A G+++++V KKS + ++ N ++R ++ Sbjct: 273 FDGSFTLISEFGRSYWAKCGVVISQVEYAKKSGGRDIAVVHAGANLYIRTIYQHPLWKLR 332 Query: 325 YIV------NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 V G D+ GP C D + R + GD + + +GAY Sbjct: 333 VTVFDSTGVYQDGKDGASVMDLAGPCCFAADLLVKERLLPTINKGDYVMVHDSGAYFYSS 392 Query: 379 SGTYNSRLLIPEIMVN--GSQ----FHIIRPRMTFQELIEL 413 YN RL P V + I+ T ++ I Sbjct: 393 YSHYNLRLAPPIFAVESVDGKTYDSIKQIKKGETIEQKIAF 433 >gi|71734209|ref|YP_274941.1| hypothetical protein PSPPH_2752 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554762|gb|AAZ33973.1| LysA [Pseudomonas syringae pv. phaseolicola 1448A] gi|320324164|gb|EFW80244.1| hypothetical protein PsgB076_13342 [Pseudomonas syringae pv. glycinea str. B076] gi|320328441|gb|EFW84443.1| hypothetical protein PsgRace4_18243 [Pseudomonas syringae pv. glycinea str. race 4] gi|330885703|gb|EGH19852.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. glycinea str. race 4] Length = 402 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 85/386 (22%), Positives = 149/386 (38%), Gaps = 12/386 (3%) Query: 22 AHVVQT-PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 A ++T P + Y A++++ A + YA+KANS +++TLA L SG Sbjct: 15 AQALETDPLAAFVYDLDALQQHVTDVMAALP-AGVELYYAIKANSEALMLETLAPLVSGF 73 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 +I S GE+ R A + VFSG GK ++ AL + + ++ES +E+ L A Sbjct: 74 EISSGGEIERV-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAE 132 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 G+ P+ R+NP + A K++ FGI + + + + G + Sbjct: 133 ETGRVQPVFLRINPQLPAAQSSKLAMAGTATPFGIDETDLAEAIRRVDSASHLTLKGFHV 192 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI--DVGGGLGIAYHSDHRPPSSSDY 256 H S +E + Q+ ++ + + GG + + + Sbjct: 193 HAMSHQMSVERHEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRL 252 Query: 257 ASLIHQYFGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + G + I EPGRF+ A G +V+ K S + F++ + F P Sbjct: 253 CRYLEKRLGEQRDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLP 312 Query: 315 TLYDAYHE--INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 H G +VG +C D ++ + + GDLL + G Sbjct: 313 VAQGHDHPVIHVPCAPATGASEEQAYTVVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAG 372 Query: 373 AYGAVQSG-TYNSRLLIPEIMVNGSQ 397 AYG S + + V + Sbjct: 373 AYGYNISHVDFLCHPRPVQHFVRNGE 398 >gi|237797381|ref|ZP_04585842.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020231|gb|EGI00288.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 402 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 82/380 (21%), Positives = 147/380 (38%), Gaps = 13/380 (3%) Query: 28 PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 P + Y A++++ A + YA+KANS +++TLA L SG +I S GE Sbjct: 22 PLATFIYDLDALQQHVREVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGE 80 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + R A + VFSG GK ++ AL + + ++ES +E++ L A G+ P Sbjct: 81 IERV-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEETGRVQP 139 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R+NP + A K++ FGI + + + + + G +H S Sbjct: 140 VFIRINPHLPAEQSSKLAMAGTATPFGIDEADLTQAVSLVDSASHLTLKGFHVHAMSHQM 199 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHI--DVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 +E + Q ++ + GG + + + + + Sbjct: 200 SVERHEQLLDFYLQRWQAWKALARYPDQLTHFNVGGGIGVDYLNSQQFDWQRLCRYLEKR 259 Query: 264 FGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 I EPGRF+ A G V +V+ K S + F++ + F P H Sbjct: 260 LAEHSDAPILRFEPGRFISAYCGYYVIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQGHDH 319 Query: 322 EINYIVNPAGD--RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA--V 377 + ++ + +VG +C D ++ + + GDLL + GAYG Sbjct: 320 PVIHLPSVPPTAAPSEQAYTVVGQLCTPKDVLSRRQPLKNVNIGDLLVLPMAGAYGYNIS 379 Query: 378 QSGTYNSRLLIPEIMVNGSQ 397 + + + V Q Sbjct: 380 HA-DFLCHPRPLQHFVRNGQ 398 >gi|254695245|ref|ZP_05157073.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 3 str. Tulya] gi|261215608|ref|ZP_05929889.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 3 str. Tulya] gi|260917215|gb|EEX84076.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 3 str. Tulya] Length = 377 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 86/365 (23%), Positives = 142/365 (38%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P T + +NY F A + YA+KAN +++ LA LGS D S E+ Sbjct: 18 PCLVVDTDVVRENYQGFEKALPYS--RIFYAVKANPAPEILRLLASLGSSFDTASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A +RI + K +I A GI + V+ E++ + + A + Sbjct: 76 MALEAGATPDRISYGNTIKKERDIARAFDLGIRLYAVDCVEEVEKIARVAPGSRVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + A L + GV H+GSQ + Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPAMAKDVLRRAKALG-LDAYGVSFHVGSQQTDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QYFG 265 ++ +A + + L G + +++GGG Y D + A ++FG Sbjct: 185 TAWDRALADAAAVFRTLADEGIILCMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSRHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVI-SIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 N + I+EPGR +V + G++ T+V+ +K+ + + + + F Sbjct: 245 NRIPETIIEPGRGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRY 304 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 IV P + GP C++ D + LP GD + IE TGAY S Sbjct: 305 QIVTPHDGSETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|241654744|ref|XP_002411340.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215503970|gb|EEC13464.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 442 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 75/389 (19%), Positives = 127/389 (32%), Gaps = 28/389 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + + YA+K N N V++ LA G G D S E+ Sbjct: 60 PFYVVDIDDLFYRMDLWRKSIPRAAP--YYAVKCNDNPVVLEVLAGSGLGFDCASINEIE 117 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 +A V RI+++ K + I A G+ +S EL + + + + Sbjct: 118 TMIALGVDPSRIIYAHPQKHVSFIRRARDLGVDLVTFDSSEELYKIKEHHPTCRVVLRLR 177 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + DKFG + L A L + G+ H+GS Sbjct: 178 VDNDKA----------WFAMGDKFGCTDKEAVQLLRLAKDLQLA-VVGICFHVGSSNQDP 226 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFG 265 +F A R R+ G ++ +D+GGG S+ ++D + + Sbjct: 227 TAFAGAIAGARRAFDAARAMGFDVTLLDIGGGYPGEKESEPIFLKTADIINEGLEKYFPE 286 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY------DA 319 + II EPG F V L K+I + + + M Sbjct: 287 SYGVNIISEPGTFFVHSAFTLFAKIIGKRINEGQNNTKPRQMMYYINESVYKSFVVSLFN 346 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + + D + + G C+ D I + K+ G L E GAY + Sbjct: 347 DDPVEPLPLMDSDGPLHESIVWGITCDGLDKIKASCKLPELSVGQWLMFENMGAYTITLN 406 Query: 380 GTYNSRLLIPEI-----MVNGS--QFHII 401 +N + +V + +I Sbjct: 407 TPFNGFPSADIVYRSSKLVEDHLRRHKLI 435 >gi|332715985|ref|YP_004443451.1| ornithine decarboxylase [Agrobacterium sp. H13-3] gi|325062670|gb|ADY66360.1| ornithine decarboxylase [Agrobacterium sp. H13-3] Length = 377 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 85/373 (22%), Positives = 148/373 (39%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F ++ ++ + YA+KAN ++K LA LGS D S E++ Sbjct: 18 PCLVVDLDVVRDNFNAFRHSLP--NSAIYYAVKANPAPEILKLLASLGSNFDCASVAEIQ 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A ++RI F K ++ A GI F V+S E++ + + A + Sbjct: 76 MALDAGATSDRISFGNTIKKERDVARAYALGIDLFAVDSHEEVEKVARAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L ++ GV H+GSQ+ + Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLG-LESYGVSFHVGSQMMNL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 +++ A + + L G ++Q +++GGG Y A ++FG Sbjct: 185 DAWDAALGDAKRVFASLSKQGIHLQMVNMGGGFPTKYLRGVPAAEEYGQAIDTALRKHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N K I+EPGR +V + G++ +V+ + + +D I Y Sbjct: 245 NQIPKTIIEPGRGMVGNAGVIKAEVVLVSRKSDNDNHRWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDRLH-IHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D+ + GP C++ D + LP GD + IE GAY S Sbjct: 305 PIRTERDQDEMEPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGAGAYTTTYSAV 364 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 365 AFNGFEPLKAYVI 377 >gi|298487275|ref|ZP_07005324.1| pyridoxal-dependent decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158299|gb|EFH99370.1| pyridoxal-dependent decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 402 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 85/386 (22%), Positives = 148/386 (38%), Gaps = 12/386 (3%) Query: 22 AHVVQT-PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 A ++T P + Y A++++ A + YA+KANS +++TLA L SG Sbjct: 15 AQALETDPLAAFVYDLDALQQHVTDVMAALP-AGVELYYAIKANSEALMLETLAPLVSGF 73 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 +I S GE+ R A + VFSG GK ++ AL + + ++ES +E+ L A Sbjct: 74 EISSGGEIERV-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAE 132 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 G+ P+ R+NP + A K++ FGI + + + G + Sbjct: 133 ETGRVQPVFLRINPQLPAAQSSKLAMAGTATPFGIDETDLAEAIRRLDGASHLTLKGFHV 192 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI--DVGGGLGIAYHSDHRPPSSSDY 256 H S +E + Q+ ++ + + GG + + + Sbjct: 193 HAMSHQMSVERHEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRL 252 Query: 257 ASLIHQYFGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + G + I EPGRF+ A G +V+ K S + F++ + F P Sbjct: 253 CRYLEKRLGEQRDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLP 312 Query: 315 TLYDAYHE--INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 H G +VG +C D ++ + + GDLL + G Sbjct: 313 VAQGHDHPVIHVPCAPATGASEEQAYTVVGQLCTPKDVLSRQQPLKGVNIGDLLVLPLAG 372 Query: 373 AYGAVQSG-TYNSRLLIPEIMVNGSQ 397 AYG S + + V + Sbjct: 373 AYGYNISHVDFLCHPRPIQHFVRNGE 398 >gi|15616520|ref|NP_244826.1| carboxynorspermidine decarboxylase [Bacillus halodurans C-125] gi|10176583|dbj|BAB07677.1| carboxynorspermidine decarboxylase [Bacillus halodurans C-125] Length = 379 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 64/388 (16%), Positives = 114/388 (29%), Gaps = 21/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP Y +EKN + + A KA S + + +G Sbjct: 8 EELPTPCYVVDEALVEKNVKILNGIMKRTGAKIVLAQKAFSMSTMYPLIGKYLTGTTASG 67 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + E +F+ + + ++ FN S+ E Sbjct: 68 LYEARLGHE-EMGKENHIFAPAYREDEIDEIVSICDHIIFNSFSQLEKFKQRALDAGSKV 126 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + + S G + + Q Sbjct: 127 GLRINPECSTQVGHEIYDPCSPGSRFGVKQEDVRQELLDGVSGLH--------FHTLCQQ 178 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 D +E+ A + ++ ++ I+ GGG I + I + Sbjct: 179 NSDDLETTLDAVE------EKFGQWLPQMEWINFGGGHHITRDD----YDIPRLEACIKR 228 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ LEPG + + G LVT V+ + ILD + M L Y Sbjct: 229 MQDKYGLEVYLEPGEAIALNAGYLVTTVLDL-HKNGIDIAILDTSATCHMPDVLEMPYRP 287 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + G++ + GP C TGD I + GD L Y V++ T+ Sbjct: 288 PLFGSGEPGEKP-FTYRLGGPTCLTGDVIGDYSFDQPLKSGDRLVFGDMAIYSMVKTNTF 346 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 N L + + + +Q+ Sbjct: 347 NGMPLPAIATKHQDGDCQVVRQFGYQDF 374 >gi|15966628|ref|NP_386981.1| putative ornithine, DAP, or arginine decarboxylase protein [Sinorhizobium meliloti 1021] gi|307300337|ref|ZP_07580117.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti BL225C] gi|307319620|ref|ZP_07599046.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83] gi|15075900|emb|CAC47454.1| Putative ornithine, DAP, or arginine decarboxylase [Sinorhizobium meliloti 1021] gi|306894742|gb|EFN25502.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83] gi|306904503|gb|EFN35087.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti BL225C] Length = 379 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 148/373 (39%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F +A D+ + YA+KAN +++ LA LGS D S E+ Sbjct: 20 PCLVVDLDVVRDNFKAFRHALP--DSAIYYAVKANPAPEILRLLAGLGSNFDCASVAEIE 77 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A RI + K ++ A GI F V+S E++ + + A + Sbjct: 78 MALDAGATPNRISYGNTIKKERDVARAHALGISLFAVDSHEEVEKIARAAPGARVFCRVL 137 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L V GV H+GSQ+ ++ Sbjct: 138 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLVS-YGVSFHVGSQMTKL 186 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 +++ A + + QL G ++ +++GGG Y D + A ++FG Sbjct: 187 DAWDAALADAKRVFVQLAKQGIELKMVNMGGGFPTKYLRDVPSAEAYGQAIFGALKKHFG 246 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ + K +D I Y Sbjct: 247 NNIPETIIEPGRGMVGNAGVIKAEVVLVSKKSDNDSHRWVFLDIGKFGGLAETMDEAIRY 306 Query: 326 IVNPAGDRL-HIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + A D + GP C++ D + LP GD + IE TGAY S Sbjct: 307 PIRTARDADAMEPCVLAGPTCDSADVLYEKNMYPLPISLTIGDEVLIEGTGAYTTTYSAV 366 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 367 AFNGFEPLKAYVI 379 >gi|126740499|ref|ZP_01756186.1| decarboxylase, pyridoxal-dependent [Roseobacter sp. SK209-2-6] gi|126718300|gb|EBA15015.1| decarboxylase, pyridoxal-dependent [Roseobacter sp. SK209-2-6] Length = 404 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 81/383 (21%), Positives = 135/383 (35%), Gaps = 20/383 (5%) Query: 18 LEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +A P A+ Y + YA+KAN A++K L LG+ Sbjct: 35 LAYIAQNRFARPTLVVDLDAVAAQYRALEAGLGR--ARIHYAVKANPEAAILKRLVALGA 92 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D E+ LAA A +I F K +I A GI F ++ EL+ + Sbjct: 93 HFDAAGRAEIDMCLAAGATAAQISFGNTIKRPADIAYAHACGITHFAFDASEELEKIATH 152 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I KFG L A L V ++G+ Sbjct: 153 APGAEVCLRIIVENCEA----------DWPLSRKFGCAPEDALRLMDQARGLGLV-VNGL 201 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS-SSD 255 H+GSQ + + + + +Q R GH ++ +++GGG +Y + + Sbjct: 202 SFHVGSQTREPDMWVPVLDQAAAIWRQAREAGHALRLVNIGGGFPASYDQQMQGAEAYAR 261 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 + +I+ EPGR LVA+ G + +V+ + K + Sbjct: 262 EVMKQVEARFGEAAEIMAEPGRGLVAEAGAIAAEVLLVSKKHENDLHRWVYLDVGKFSGL 321 Query: 316 LYDAYHEINYIVNPAGDRL-HIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKT 371 I Y + D + GP C++ D + + LP + GD + I Sbjct: 322 AETMDEAIRYRITTDRDHEAKGPCVVAGPSCDSVDVLYEKQPYQLPTGLKAGDRVVIHSC 381 Query: 372 GAYGAVQSG-TYNSRLLIPEIMV 393 GAY + + +N + I++ Sbjct: 382 GAYTSTYASIGFNGFPPLDVIVI 404 >gi|330967131|gb|EGH67391.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 402 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 82/377 (21%), Positives = 148/377 (39%), Gaps = 11/377 (2%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + Y A++++ A + YA+KANS +++TLA L SG +I S GE+ R Sbjct: 25 AFIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A + VFSG GK ++ AL + + ++ES +E++ L A G+ P+ Sbjct: 84 V-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEQTGRVQPVFI 142 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+NP + A K++ FGI + + + + G +H S +E Sbjct: 143 RINPQLPAAQSSKLAMAGTATPFGIDEADLAEAVRLVDSATHLTLKGFHVHAMSHQMSVE 202 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHI--DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + Q ++ + +H+ GG + + + + + G Sbjct: 203 RHEQLLDFYLQRWQAWKALARHPEHLTHFNVGGGIGVDYLNSQQFDWQRLCRYLEKRLGE 262 Query: 267 LQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 I EPGRF+ A G V +V+ K S + F++ + F P H + Sbjct: 263 QPDAPILRFEPGRFISAYCGYYVIEVLDSKSSHGEHFLVCRGGTHQFRLPVAQSHDHPVI 322 Query: 325 YIVNPAGDRL--HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA--VQSG 380 ++ + +VG +C D ++ + GDLL + GAYG + Sbjct: 323 HLPSVPPTTASSEQAYTVVGQLCTPKDVLSRRQPFKDVNIGDLLVLPMAGAYGYNISHA- 381 Query: 381 TYNSRLLIPEIMVNGSQ 397 + + V + Sbjct: 382 DFLCHPRPSQHFVRNGE 398 >gi|328717376|ref|XP_001952703.2| PREDICTED: ornithine decarboxylase-like [Acyrthosiphon pisum] Length = 444 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 73/400 (18%), Positives = 140/400 (35%), Gaps = 20/400 (5%) Query: 3 AFKYFEGSLHAENVSLEKLAHVV--QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 + + E + ++ + PFY + + + + + YA+K Sbjct: 9 QIHIIDNEVTVEEI-IKDIVRTNVMSDPFYIFDIGDLVNKAIIWQQKLPRVKP--FYAVK 65 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 N + V++ L+ G+ D S+ E+++ L V R++F+ K I A+ + Sbjct: 66 CNDSSLVLEILSAFGTNFDCASKVEIKKVLDLGVNPSRLIFANPAKMASHIKYAMSKCVD 125 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 +++ EL + S I K+G Sbjct: 126 LTTFDNKLELYKIKSLHPSCNLVIRIRCDATEA----------QCPLGIKYGCDPLTEAP 175 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI-DVGGG 239 + G+ + GV H+GS ++ +F +A + Q + G ++ ++GGG Sbjct: 176 SLMALARDLGLSVVGVSFHVGSGCNEPAAFQRAIAASAGIFQLAQELGFMNMYLLNIGGG 235 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS----IKK 295 ++ ++ +L + N II EPGR+ VA L TK+ S Sbjct: 236 FPGNKNTSLDKIANIVNDALDEWFPPNNGVTIIAEPGRYFVASAFTLATKIHSIKKRSNN 295 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + I D F + + + + R + I GP C+ D + Sbjct: 296 ESHIMYFINDGVYGSFNSILYDHSVIVPKSLYDYSRSRPICESSIWGPTCDGLDKVVDFV 355 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 + L + D + E GAY + T+N L V Sbjct: 356 NMPLLKMDDWITFENMGAYTIPIACTFNGFPLPKVFAVAN 395 >gi|327189543|gb|EGE56696.1| putative ornithine decarboxylase protein [Rhizobium etli CNPAF512] Length = 377 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 91/373 (24%), Positives = 147/373 (39%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F +A D+ + YA+KAN V+K LA LGS D S E+ Sbjct: 18 PCLVVDLDVVRDNFHAFRHAMP--DSAIYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A A RI F K ++ A G+ F V+S E++ +++ A + Sbjct: 76 MALEAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L GV H+GSQ+ ++ Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLQS-YGVSFHVGSQMTKV 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ A + + L G ++Q +++GGG Y D + + +FG Sbjct: 185 DAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRMHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I K +D I Y Sbjct: 245 NQIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDRLH-IHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D I GP C++ D + LP GD + IE TGAY S Sbjct: 305 PIRTEHDGDEMEPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAV 364 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 365 AFNGFEPLKAYVI 377 >gi|255028451|ref|ZP_05300402.1| hypothetical protein LmonL_03126 [Listeria monocytogenes LO28] Length = 280 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 13/278 (4%) Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY---ASTLPGVKISGVDMHIGSQID 205 RV P I A+TH I TG+ + KFG + + A + G+ HIGSQI Sbjct: 1 RVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIF 60 Query: 206 QIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY- 263 + F A + + D + G + + +++GGG G+ Y ++ P S+Y I Sbjct: 61 ETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEV 120 Query: 264 ------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-KTFVILDVAMNDFMRPTL 316 +I +EPGR LV + G + KV S K+ + ++ +D M+D +RP L Sbjct: 121 RDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRPAL 180 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 YDA+++ NP I G CE+GD + + + G++L + TGAYG Sbjct: 181 YDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGAYGY 239 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YN P + V +I R T++ L++ D Sbjct: 240 AMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQND 277 >gi|163741810|ref|ZP_02149200.1| decarboxylase, pyridoxal-dependent [Phaeobacter gallaeciensis 2.10] gi|161384983|gb|EDQ09362.1| decarboxylase, pyridoxal-dependent [Phaeobacter gallaeciensis 2.10] Length = 393 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 78/383 (20%), Positives = 142/383 (37%), Gaps = 20/383 (5%) Query: 18 LEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +A P + A+ + Y + + YA+KAN +++ L +G+ Sbjct: 24 LSYIAQNAFDRPTLVIDSQAVARQYAALAQGLGR--ARIHYAVKANPEPQILRRLTRMGA 81 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D S E+ LAA +I F K +I A + GI F V++ +EL L Sbjct: 82 NFDAASRAEIEMCLAAGAKPSQITFGNTIKRPADIAFAHEIGITHFAVDALAELDKLADH 141 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A + KFG +L A L +SG+ Sbjct: 142 APGARVCIRLLVETTGA----------DWPLSRKFGCTAAMALTLMDRARDLDLC-VSGL 190 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GSQ + + + + + + ++ GH + +++GGG +Y ++ P+ Sbjct: 191 SFHVGSQTREPQMWADTLDQVAQVWRTAKTAGHELTLLNIGGGFPASYGTEVMAPNRYAQ 250 Query: 257 -ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-ISIKKSADKTFVILDVAMNDFMRP 314 + +I+ EPGR LVA+ G + +V + +K AD + + + F Sbjct: 251 EVMALVNARFPDASEIMAEPGRGLVAEAGAIAAEVLLVSRKDADDLHRWVYLDIGKFSGL 310 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA---LPRPGDLLYIEKT 371 I GD + GP C++ D + + + GD + I Sbjct: 311 AETMDEAIRYRITTEHGDGQTGPCILAGPSCDSADVLYEKQLYQMPLELKSGDRVVIHAC 370 Query: 372 GAYGAVQSGT-YNSRLLIPEIMV 393 GAY + +N + +++ Sbjct: 371 GAYTTTYASVGFNGFPPLDVVVI 393 >gi|319781640|ref|YP_004141116.1| ornithine decarboxylase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167528|gb|ADV11066.1| Ornithine decarboxylase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 377 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 93/373 (24%), Positives = 148/373 (39%), Gaps = 21/373 (5%) Query: 21 LAHVVQT-PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA T P + N+ F A D+ + YA+KAN +++ LA +GS D Sbjct: 10 LATRRPTGPCLVVDLDVVRDNFRAFEKALP--DSRIYYAVKANPAPEILRLLAAMGSSFD 67 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S E+ A+ A PA+RI F K +I A Q GI F V+ E++ + + A Sbjct: 68 TASVAEVEMAMDAGAPADRISFGNTIKKERDIARAYQLGIRLFAVDCVEEVEKIARVAPG 127 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + T + + KFG + +A L + GV H Sbjct: 128 ARVFCRVL----------TDGEGAEWPLSRKFGCVPAMAVDVLRHAKGLG-LDAYGVSFH 176 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 +GSQ + ++ +A + + L G ++ +++GGG Y D + A Sbjct: 177 VGSQQTDLTAWDRALADAKVVFATLAEEGIVLKMVNMGGGFPTRYLRDVPAAQAYGQAIF 236 Query: 260 I--HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 ++FGN + I+EPGR +V + G++ ++V+ I K A V Sbjct: 237 SALRKHFGNAIPETIIEPGRGMVGNAGVIKSEVVLISKKAANDNVRWVFLDIGKFGGLAE 296 Query: 318 DAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGA 373 I Y + A D + GP C++ D + LP GD + IE TGA Sbjct: 297 TMDEAIRYPIVTAHDGTETAPCVLAGPTCDSADVMYEKTPYPLPLSLTIGDEVLIEGTGA 356 Query: 374 YGAVQSGT-YNSR 385 Y S +N Sbjct: 357 YTTTYSAVAFNGF 369 >gi|325981612|ref|YP_004294014.1| Ornithine decarboxylase [Nitrosomonas sp. AL212] gi|325531131|gb|ADZ25852.1| Ornithine decarboxylase [Nitrosomonas sp. AL212] Length = 390 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 88/378 (23%), Positives = 149/378 (39%), Gaps = 19/378 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ + +TPF I++ Y S F YA+KAN ++ L G+ Sbjct: 19 RIKAFSDTHETPFLVVDLATIDRQYDEMSRHFPY--ARTYYAVKANPAPQILTLLKDKGA 76 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI S EL + LA V +RI F K +I Q G+ F +SE++L+ + + Sbjct: 77 CFDIASTYELDKVLALGVTPDRISFGNTIKKAKDIRTFYQKGVRMFATDSEADLRNIAKA 136 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + T ++ + + A L GV Sbjct: 137 APGARIYTRI-------LTEGTLTADWPLSRKFGCESDMAMDLLILARDLGL---DPYGV 186 Query: 197 DMHIGSQIDQIESFHKA-FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS- 254 H+GSQ +I ++ A K+ + + ++ I++GGG Y S Sbjct: 187 SFHVGSQQREIGAWDAALGKVKVIFNRLWEEDRIKLKMINMGGGFPANYLQRTNELSIYA 246 Query: 255 -DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + A +H+ F + +II+EPGR ++++ G+LV++V+ I + + Sbjct: 247 EEIARFLHEDFLDDMPEIIIEPGRSMISNAGVLVSEVVLISRKSRTALHRWIYTDVGKFT 306 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEK 370 + I Y + + +A I GP C++ D + N K + L GD LY Sbjct: 307 GLIETLDESIKYPIYTEKNGEFENAIIAGPTCDSADIMYENYKYGLPLNLAAGDRLYWLS 366 Query: 371 TGAYGAVQSG-TYNSRLL 387 TGAY S +N Sbjct: 367 TGAYTTTYSSVEFNGFPP 384 >gi|153011560|ref|YP_001372774.1| Orn/DAP/Arg decarboxylase 2 [Ochrobactrum anthropi ATCC 49188] gi|151563448|gb|ABS16945.1| Orn/DAP/Arg decarboxylase 2 [Ochrobactrum anthropi ATCC 49188] Length = 377 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 86/365 (23%), Positives = 145/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P T + NY +F A + YA+KAN +++ LA LGS D S E+ Sbjct: 18 PCLVVDTDVVRDNYQSFEKALPYS--RIFYAVKANPAPEILRLLASLGSCFDTASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A RI + K +I A + GI + V+ E++ + + A + Sbjct: 76 MALEAGATPTRISYGNTIKKERDIARAFELGIRLYAVDCVEEVEKVARAAPGSRVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + +A +L + GV H+GSQ + Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPAMAIDVLRHAKSLG-LDSYGVSFHVGSQQTDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QYFG 265 ++ +A + + L G ++ +++GGG Y D + A ++FG Sbjct: 185 SAWDRALGDAASVFRTLADEGIVLRMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSKHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVI-SIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 N + I+EPGR +V + G++ T+V+ +K+ + + + + F Sbjct: 245 NRIPETIIEPGRGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRY 304 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 IV P + GP C++ D + LP GD + IE TGAY S Sbjct: 305 QIVTPHDGSETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|13472621|ref|NP_104188.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099] gi|14023367|dbj|BAB49974.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099] Length = 377 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 90/365 (24%), Positives = 145/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F A D+ + YA+KAN +++ LA +GS D S E+ Sbjct: 18 PCLVVDLDVVRDNFRAFEKALP--DSKIYYAVKANPAPEILRLLAAMGSSFDTASVAEVE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A+ A PA+RI F K +I A Q GI F V+ E++ + + A + Sbjct: 76 MAMDAGAPADRISFGNTIKKERDIARAYQLGIRLFAVDCVEEVEKIARVAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + +A L + GV H+GSQ + Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPAMAVDVLRHAKGLG-LDAYGVSFHVGSQQTDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 ++ +A + + L G ++ +++GGG Y D + A ++FG Sbjct: 185 TAWDRALADAKKVFATLAEEGIVLKMVNMGGGFPTRYLRDVPAAQAYGQAIFSALRKHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ ++V+ I K AD V I Y Sbjct: 245 NAIPETIIEPGRGMVGNAGVIKSEVVLISKKADNDNVRWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDR-LHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + GP C++ D + LP GD + IE TGAY S Sbjct: 305 PLVTRHDGSETAPCVLAGPTCDSADVMYEKTPYPLPLSLTIGDEVLIEGTGAYTTTYSAV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|319404654|emb|CBI78256.1| lysine/ornithine decarboxylase [Bartonella rochalimae ATCC BAA-1498] gi|319404673|emb|CBI78275.1| lysine/ornithine decarboxylase [Bartonella rochalimae ATCC BAA-1498] Length = 377 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 88/365 (24%), Positives = 143/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + +NYL F A + YA+KAN +++ L LGS D S E+ Sbjct: 18 PCLVVDLDVVHENYLNFEKALPQS--RIFYAIKANPAPEILRLLVSLGSFFDAASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA A RI F K +I A GI + ++ E++ + + A + Sbjct: 76 MALAAGATANRISFGNTIKKERDIARAHALGISLYAIDCFEEVEKVARAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L ++ GV H+GSQ + Sbjct: 136 ----------TDGEGAEWPLSQKFGCVPSMAVDVLRYAHHLG-LQAHGVSFHVGSQQTDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR--PPSSSDYASLIHQYFG 265 ++ +A + + L G +Q +++GGG Y D + +YFG Sbjct: 185 NAWDRALSDTAFVFKSLEQEGIQLQLVNMGGGFPTRYLKDIPTVQTYGMSIFDALKKYFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSA-DKTFVILDVAMNDFMRPTLYDAYHEIN 324 N + I+EPGR +V + G++ T+V+ I K + + + + F T Sbjct: 245 NRIPETIIEPGRAMVGNAGVIRTEVVLISKKGKNDNVRWVYLDIGKFNGLTETMDEAIRY 304 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 I D+ + GP C++ D + + L GD L I TGAY + Sbjct: 305 PIETAHDDQAMEPCILAGPTCDSADIMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|89896566|ref|YP_520053.1| hypothetical protein DSY3820 [Desulfitobacterium hafniense Y51] gi|219667607|ref|YP_002458042.1| carboxynorspermidine decarboxylase [Desulfitobacterium hafniense DCB-2] gi|89336014|dbj|BAE85609.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537867|gb|ACL19606.1| carboxynorspermidine decarboxylase [Desulfitobacterium hafniense DCB-2] Length = 376 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 67/390 (17%), Positives = 124/390 (31%), Gaps = 22/390 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TP Y + +N + + + ALK S AV + G+ Sbjct: 3 IKELPTPSYVVDENLLRRNLEILQSVQERTGCKILLALKGFSMHAVFPLVGQYLKGIAAS 62 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E R + A + E V+S + +L S + + + + Sbjct: 63 SLFEARLGV-AEMGKEVHVYSPAYIEEEFDELLGYCDHM--VFNSFDQWRKFKDKVKNHP 119 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 RVNP+ + + + + G+ + + Sbjct: 120 GHIECGIRVNPEYSEIATDIYNPCYQNSRLGVTLANFRPEELEGI-----------AGLH 168 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 ++ + L+ + ++ + ++ +++GGG I I Sbjct: 169 FHTLCEQNSDTLERTLKVVEEKFGEHLRKMKWLNLGGGHHITRPD----YDIETLVRCIL 224 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 +I LEPG + + G LVTKV+ I +LD + M L Y Sbjct: 225 HLQEKYGVEIYLEPGEAIALNTGFLVTKVLDIV-DNGMKIALLDASAACHMPDVLEMPYR 283 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 G+ + G C GD I +PGD L Y V++ Sbjct: 284 PAIINGGEPGEHP-YTYRLGGNTCLAGDVIGDYSFAEPLKPGDKLIFCDMAHYTMVKNNM 342 Query: 382 YNSRLLIPEIMVNGSQ-FHIIRPRMTFQEL 410 +N L ++ N + F +IR R +++ Sbjct: 343 FNGVNLPNIMLYNEKEGFKLIR-RFGYEDF 371 >gi|163738946|ref|ZP_02146359.1| Ornithine decarboxylase [Phaeobacter gallaeciensis BS107] gi|161387751|gb|EDQ12107.1| Ornithine decarboxylase [Phaeobacter gallaeciensis BS107] Length = 391 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 78/383 (20%), Positives = 142/383 (37%), Gaps = 20/383 (5%) Query: 18 LEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +A P + A+ + Y + + YA+KAN +++ L +G+ Sbjct: 22 LSYIAQNAFDRPTLVIDSQAVARQYAALAQGLGR--ARIHYAVKANPEPQILRRLTRMGA 79 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D S E+ LAA +I F K +I A + GI F V++ +EL L Sbjct: 80 NFDAASRAEIEMCLAAGAKPSQITFGNTIKRPADIAFAHEIGITHFAVDALAELDKLADH 139 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A + KFG +L A L +SG+ Sbjct: 140 APGARVCIRLLVEATGA----------DWPLSRKFGCTAAMALTLMDRARDLDLC-VSGL 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GSQ + + + + + + ++ GH + +++GGG +Y ++ P+ Sbjct: 189 SFHVGSQTREPQMWADTLDQVAQVWRAAKTAGHELTLLNIGGGFPASYGTEVMAPNRYAQ 248 Query: 257 -ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-ISIKKSADKTFVILDVAMNDFMRP 314 + +I+ EPGR LVA+ G + +V + +K AD + + + F Sbjct: 249 EVMALVNARFPDASEIMAEPGRGLVAEAGAIAAEVLLVSRKDADDLHRWVYLDIGKFSGL 308 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA---LPRPGDLLYIEKT 371 I GD + GP C++ D + + + GD + I Sbjct: 309 AETMDEAIRYRITTEHGDGQTGPCILAGPSCDSADVLYEKQLYQMPLELKSGDRVVIHAC 368 Query: 372 GAYGAVQSGT-YNSRLLIPEIMV 393 GAY + +N + +++ Sbjct: 369 GAYTTTYASVGFNGFPPLDVVVI 391 >gi|281357820|ref|ZP_06244306.1| Orn/DAP/Arg decarboxylase 2 [Victivallis vadensis ATCC BAA-548] gi|281315767|gb|EFA99794.1| Orn/DAP/Arg decarboxylase 2 [Victivallis vadensis ATCC BAA-548] Length = 388 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 93/383 (24%), Positives = 149/383 (38%), Gaps = 25/383 (6%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A TPF + ++ Y F + YA+KAN V++ L LGS DI Sbjct: 21 ADRHPTPFLVVNLNIVKMKYEELLQHFPFS--RIYYAVKANPATEVLELLRDLGSCFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL R L+ + ER+ + K +I + G+ F +SE++L+ + + A Sbjct: 79 SRYELDRVLSLGIEPERVSYGNTIKKPADIRYFYEKGVRLFATDSEADLRNIAKEAPGAR 138 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I + + KFG L A L ++ G+ H+G Sbjct: 139 VFCRILTEGSETAD---------WPLSRKFGCHPDMAIDLVLLARELG-LQPWGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS--DHRPPSSSDYASL 259 SQ I ++ A +R + L G + I++GGG Y S + S + Sbjct: 189 SQQRDIGAWDSAIAKVRYIFDYLEGEGLKLSMINMGGGFPANYISKTNEMNVYSEEITRY 248 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKV----ISIKKSADKTFVILDVAMNDFMRPT 315 + + FG+ +IILEPGR LV + GILV++V DK + N + Sbjct: 249 LEEDFGDDFPEIILEPGRSLVGECGILVSEVVLISQKSSMGVDKWLYLDTGKFNGLIETW 308 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTG 372 + + I GP C++ D + + +P +PGD +Y TG Sbjct: 309 DESIKYPLYCEAR---GEPCEDFIIAGPTCDSQDIMYEYFRNPVPAYIKPGDRIYWLSTG 365 Query: 373 AYGAVQSG-TYNSRLLIPEIMVN 394 AY + +N +P V Sbjct: 366 AYTSSYCSVEFNGFPPLPVYFVK 388 >gi|301119039|ref|XP_002907247.1| ornithine decarboxylase 1 [Phytophthora infestans T30-4] gi|262105759|gb|EEY63811.1| ornithine decarboxylase 1 [Phytophthora infestans T30-4] Length = 481 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 85/391 (21%), Positives = 142/391 (36%), Gaps = 36/391 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY T A+E + ++ YA+K N + A+I+ LA LG+G D S+ E+ Sbjct: 93 FYVVDTAAVEDRFKLWNQYLPE--VRPYYAVKCNPDPALIEGLARLGAGFDCASQTEISS 150 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V A I+++ K +I A +G+ +S+ EL ++ S + Sbjct: 151 VLGNGVSASDIIYANPCKQGSQITYAHANGVDMMTFDSQEELTKIHSINPSAKLVLRLYV 210 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S + KFG +H + + +A L + + GV H+GS +E Sbjct: 211 D----------DSNSICRLGTKFGAMVHDVPDILNHAKAL-NLDVVGVSFHVGSGCFNVE 259 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS--SDYASLIHQYFGN 266 ++ A L R + S G N +D+GGG ++ R SL + + Sbjct: 260 AYSDAVALARKVFDIGHSQGFNFSLLDIGGGFPGTENAPIRFEDCALELKKSLAVHFPRS 319 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK-------------------KSADKTFVILDVA 307 K+I EPGRF A L VI K + + + + D Sbjct: 320 SNVKVISEPGRFFAASTHTLAVNVIGRKVAPTFDIPGQPPVLASAAGPTPNYMYFVNDGL 379 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHI--HADIVGPICETGDFIALNRKIALPRPGDL 365 F + + + A A + GP C+ D I ++ L G Sbjct: 380 YASFNCMVYDHPSIQPVIMSDTASPSATQMFKASLWGPTCDGMDCIMKEVEMPLMDIGQW 439 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS 396 + GAY +N +I + + Sbjct: 440 ILFPSMGAYTCAAGSDFNGFQRPQKIYFDSN 470 >gi|257125605|ref|YP_003163719.1| carboxynorspermidine decarboxylase [Leptotrichia buccalis C-1013-b] gi|257049544|gb|ACV38728.1| carboxynorspermidine decarboxylase [Leptotrichia buccalis C-1013-b] Length = 395 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 62/418 (14%), Positives = 130/418 (31%), Gaps = 36/418 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS KY + + + L TP + +++N T + D + A K Sbjct: 1 MSKNKYID-------MDITNL----PTPAFIVDERLLKRNLETLKSVIDRTGCKILLAQK 49 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGE--LRRALAAPVPA----ERIVFSGVGKTIDEIDLA 114 S ++ +G S E L E +F+ + + ++ Sbjct: 50 GFSMFYFYLLISEYLNGTTASSLFEARLGYEEMELKNPGKKLETHIFNPSYRDDEFDEIM 109 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 + FN ++ + + I+ + + + + Sbjct: 110 EITNHIVFNSFNQWKKFKSKVKEFEEKNGKKISCGLRLNPEFSEVETEIYNPAGRFSRFG 169 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + L G + + +L+ Q+ +N++ + Sbjct: 170 VTLENFKEDEIEGLDGFHFHALCEQ---------NSDALENVLKIFEQKFGKYLYNMKWL 220 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 + GGG +H I+ ++ LEPG + + G LV++V+ I Sbjct: 221 NFGGG----HHITREDYDIEKLVKCINYIKEKYNVEVYLEPGEAVALNTGFLVSEVLDIT 276 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + +++D + + M + Y + ++ + GP C GD I Sbjct: 277 -KNEMDILLMDTSASCHMPDVIEMPYRPFIFGSGMPNEK-KYTYRLGGPTCLAGDIIGDY 334 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV--NGSQFHIIRPRMTFQEL 410 + GD L Y V++ T+N L I V +IR +++ Sbjct: 335 SFDEPVKVGDKLIFTDMAHYSMVKTNTFNGINLP-VIAVYTEKGGVEVIRKFE-YEDF 390 >gi|222149795|ref|YP_002550752.1| ornithine decarboxylase [Agrobacterium vitis S4] gi|221736777|gb|ACM37740.1| ornithine decarboxylase [Agrobacterium vitis S4] Length = 377 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 95/373 (25%), Positives = 151/373 (40%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY F +A D+ + YA+KAN A++ LA LGS D S E+ Sbjct: 18 PCLVVDLDVVRDNYGAFRHALP--DSAIYYAVKANPEPAILSLLASLGSNFDCASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA A+RI F K +I A GI F V+S E++ + + A + Sbjct: 76 MALAAGATAQRISFGNTIKKERDIAKAHALGINLFAVDSHEEVEKIARAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA ++ GV H+GSQ+ ++ Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQHG-LESFGVSFHVGSQMTKV 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 +++ A + + QL G +Q +++GGG Y D + A ++FG Sbjct: 185 DAWDAALGDAKRVFAQLAKQGIYLQMVNMGGGFPTKYLRDIPSAEAYGQAINASLKKHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I K +D I Y Sbjct: 245 NNIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDAHRWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDRLH-IHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + A D + GP C++ D + LP GD + IE TGAY S Sbjct: 305 PIRTAHDGDEMEPCVLAGPTCDSADVMYEKNMYPLPLSLTIGDDVLIEGTGAYTTTYSAV 364 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 365 AFNGFEPLKAYVI 377 >gi|218782485|ref|YP_002433803.1| carboxynorspermidine decarboxylase [Desulfatibacillum alkenivorans AK-01] gi|218763869|gb|ACL06335.1| carboxynorspermidine decarboxylase [Desulfatibacillum alkenivorans AK-01] Length = 376 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 67/386 (17%), Positives = 120/386 (31%), Gaps = 26/386 (6%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP Y +E N + ALK + V + G+ S E Sbjct: 9 QTPCYVVDEALLENNLRILDRVQKQAGVKILLALKGFAMFGVFPLIRQYLPGVTASSLNE 68 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 R E + + + + L G FN S+ + Sbjct: 69 ARLGRE-EFGGEVHLCAPAYREEEFGQLLDCCGHVVFNSFSQKDKYLAAA---------- 117 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + + E P L + G+ + Sbjct: 118 ----LKKGVRCGLRINPEHREVETAIYDPCGPCSRLGVALENFQDGDLEGITGLHFHNLC 173 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + A + L+ + ++ +++ I++GGG I S + Sbjct: 174 EKGADALA-RTLKVVEEKFGRYISSMEWINMGGGHHITRGDYDVELLCSTL----KAFKE 228 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 +I LEPG + + G+LV V+ + ++ + + A P + + + Sbjct: 229 KYGVEIYLEPGEAVALNTGVLVASVLDVVH--NQMPIAILDASAATHMPDVLEMPYRPEV 286 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A L + + GP C GD I A RPGD L Y V++ T+N Sbjct: 287 EGAGAPGELAVTYRLAGPSCLAGDVIGDYSFAAELRPGDQLVFHDMAHYTMVKNNTFNGI 346 Query: 386 LLIPEIMVNG--SQFHIIRPRMTFQE 409 L I V + ++R T+Q+ Sbjct: 347 NLPS-IAVRKKTGEIEVLR-AFTYQD 370 >gi|71068208|gb|AAZ23063.1| probable decarboxylase [Streptomyces fradiae] Length = 470 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 89/395 (22%), Positives = 145/395 (36%), Gaps = 19/395 (4%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVC-YALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 I + + AF G ++ +A KA S V++ LA G G ++ S GELR AL Sbjct: 49 LDVDHIRQQVASLRAAFAGAPDVLHTFAAKAASLVPVLRLLAEDGMGCEVASPGELRLAL 108 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A P +RIV KT EI AL+ G+ + EL+ ++ G + I RV Sbjct: 109 DAGFPPDRIVLDSPAKTRSEIAEALRLGVAVNADNLD-ELERIDALRPP-GCSSVIGLRV 166 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 NP + +ST KFG+ + + + +H Sbjct: 167 NPQVGGGAIGAMSTATATSKFGVALRDEGARERVVEAFAR-RPWLTGLHAHVGSQGCPLE 225 Query: 211 HKAFKLLRDLTQQLRSN----GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF-- 264 A + N + +D+GGGL + + D P+ DY + + Sbjct: 226 LIAEGIAATHRLAEEINAVLGRRQVTGLDIGGGLPVNFTDDTVRPTYQDYTAALRTAVPG 285 Query: 265 -GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + + ++ E GR L+A G + +V +K++ + + R L + Sbjct: 286 LFDGRYALVTEFGRSLLAKSGFIAARVEYVKEAGGRRIAVTHAGAQTATRTALMPDAWPL 345 Query: 324 NYIVNPAGDRLHIH----ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 A D+ GP C GD +A R++ L GD + + TGAY Sbjct: 346 RVGAFDAEGHPKQTPPRVQDVAGPCCFAGDVVATGRELPLLEEGDHVVLYDTGAYYFSTP 405 Query: 380 GTYNSRLLIPEIMVNGSQFHI----IRPRMTFQEL 410 YNS + + +R T E+ Sbjct: 406 WAYNSLPRVGVHGYRTDGAQVRSAPVRDPQTLDEI 440 >gi|330947151|ref|XP_003306849.1| hypothetical protein PTT_20120 [Pyrenophora teres f. teres 0-1] gi|311315441|gb|EFQ85060.1| hypothetical protein PTT_20120 [Pyrenophora teres f. teres 0-1] Length = 445 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 82/376 (21%), Positives = 139/376 (36%), Gaps = 36/376 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L + + YA+K N + V++ + LG G D S+ E+ Sbjct: 66 FFIADLGEVYRQHLRWKKNLSRVKP--HYAVKCNPDPQVLRLMTALGLGFDCASKNEIET 123 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ KT + A QSG+ ++ EL Q I Sbjct: 124 VLNLGVDPSRIIYAQPCKTKSYVRYAAQSGVKQMTFDNADELYKTKQLFPDAELYLRIL- 182 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L + + GV H+GS + Sbjct: 183 ---------TDDSASLCRLSQKFGAALDTTAELLELAKKL-ELNVVGVAFHVGSGASDPK 232 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q + G N+ +DVGGG + + S + Sbjct: 233 AFIKAVQDARFVFDQAAALGFNMHTLDVGGGFTGDVTFE----PMAAVLSAALDEYFPPH 288 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT------FVILDVAMNDFMRPTLYDAYHE 322 ++I EPGR+ V+ L VI+ + D T + ++ + ++D H Sbjct: 289 IRVIGEPGRYYVSTAFTLACHVIARRAVNDATLGTTSYMLYMNDGVYGNFSSIIFDHQHP 348 Query: 323 INYIVNPAGD------------RLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIE 369 + ++ D + I GP C+ D I+ + GD LY E Sbjct: 349 VPRVLKNGNDVLYDVRRSGYDTPSQVEYSIWGPTCDGIDVISSSCTFPELLDVGDWLYFE 408 Query: 370 KTGAYGAVQSGTYNSR 385 + GAY + +N Sbjct: 409 EMGAYTKCSATRFNGF 424 >gi|116253893|ref|YP_769731.1| lysine/ornithine decarboxylase [Rhizobium leguminosarum bv. viciae 3841] gi|115258541|emb|CAK09645.1| putative lysine/ornithine decarboxylase [Rhizobium leguminosarum bv. viciae 3841] Length = 377 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 90/365 (24%), Positives = 144/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F +A D+ + YA+KAN V+K LA LGS D S E+ Sbjct: 18 PCLVVDLDVVRDNFDAFRHAMP--DSAIYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A A RI + K ++ A G+ F V+S E++ +++ A + Sbjct: 76 MALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L GV H+GSQ+ ++ Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLQS-YGVSFHVGSQMTKV 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ A + + L G ++Q +++GGG Y D + + +FG Sbjct: 185 DAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I K +D I Y Sbjct: 245 NQIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDRLH-IHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D I GP C++ D + LP GD + IE TGAY S Sbjct: 305 PIRTEHDGDEMEPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|56695279|ref|YP_165627.1| decarboxylase, pyridoxal-dependent [Ruegeria pomeroyi DSS-3] gi|56677016|gb|AAV93682.1| decarboxylase, pyridoxal-dependent [Ruegeria pomeroyi DSS-3] Length = 393 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 82/396 (20%), Positives = 149/396 (37%), Gaps = 24/396 (6%) Query: 9 GSLHAENVSLEK-----LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 G L E+ +L + LA+ P T A+ + + + + YA+KAN Sbjct: 11 GPLACESATLSRAETFILANRFDRPTLVIDTQAVARQFAALAQGLGRAG--IHYAVKANP 68 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ TLA LGS D S E+ LAA A+RI F K +I A +GI F Sbjct: 69 LPEILSTLARLGSNFDAASRVEIELCLAAGASADRISFGNTVKKPADIAWAHAAGIALFA 128 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 ++E EL + A + KFG + ++ Sbjct: 129 ADAEDELDKIAAHAPGAKVYIRMIVEACQA----------DWPLSRKFGCAPDKAIAVLD 178 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 YA ++ + G+ H+GSQ + E + + + R+ GH++ +++GGG Sbjct: 179 YARSVG-LDPVGLSFHVGSQTRRAEMWVPVLDQVAAVWHAARAAGHDLSLLNIGGGFPAF 237 Query: 244 YHSDHRPPSSSDY-ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT-F 301 Y + P + +I+ EPGR +VA+ G + +V+ + + + Sbjct: 238 YGQEVDAPELYAAEVIRLVGERFGDVGQIMAEPGRGMVAEAGAIAAEVLLVSRKSGHDLH 297 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA--LNRKIAL 359 + + + F + + GP C++ D + ++ L Sbjct: 298 RWVYLDIGKFSGLAETMDEAIRYQFLTEREHEPTGPCILAGPSCDSADVLYEKKPVQLPL 357 Query: 360 -PRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 R GD + I GAY + + +N + + + Sbjct: 358 GLRDGDRIVIRNCGAYTSTYASVGFNGFPPLDVVAI 393 >gi|317155498|ref|XP_001825149.2| ornithine decarboxylase [Aspergillus oryzae RIB40] Length = 416 Score = 148 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 79/386 (20%), Positives = 138/386 (35%), Gaps = 32/386 (8%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 PF T I + + + + YA+K NSN +++ LA LG G D S Sbjct: 26 QHDLPFLVADTRRIFQQHERWLQCLP--NIAPFYAVKCNSNIRLLRYLARLGVGFDCASW 83 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GE++ L V RI+F+ K + + +A +SG+ ++ EL+ + A +L Sbjct: 84 GEMKLVLNLGVDPSRIIFAHPCKAVSALQMASRSGVPRTTFDNVDELEKIKDNAPNLRLL 143 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 I + +KFG P+ +L A L V + GV H+GS Sbjct: 144 LRIF----------ADDDTALVSLGNKFGAPLDTTKALLLKAKDLGLV-VDGVSFHVGSG 192 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 ++F A + + + QQ + G ++ +DVGGG + + Sbjct: 193 ASNADTFVTAVQNAKHVFQQGKQLGFDMHVLDVGGGFQDSNFEPMALSLQRAI-----EK 247 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY--- 320 +++ EPGR+ KV++ +K + + + Sbjct: 248 EFPPSTQVMAEPGRYYARSFYTAACKVVARRKQIGQDKLSQSDMLYLNDGIYGCFMNAVA 307 Query: 321 ---------HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEK 370 + + + + GP C+ D IA + + GD + E Sbjct: 308 ENEIYRPILFKQETTSSTEREAGEHRYSVWGPTCDGLDCIAKEATMGCEVKVGDWVKFEN 367 Query: 371 TGAYGAVQSGTYNSRL-LIPEIMVNG 395 GAY S +N I V+ Sbjct: 368 MGAYTTATSTQFNGFPNRYDIIYVDD 393 >gi|145606246|ref|XP_365739.2| ornithine decarboxylase [Magnaporthe oryzae 70-15] gi|145013956|gb|EDJ98597.1| ornithine decarboxylase [Magnaporthe oryzae 70-15] Length = 459 Score = 148 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 80/385 (20%), Positives = 144/385 (37%), Gaps = 43/385 (11%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L + + YA+K N + V++ LA LG+G D S+ E+++ Sbjct: 67 FFVADLGHVYRQHLRWKKNLPRVKP--FYAVKCNPDPKVLRLLAELGNGFDCASKTEIKQ 124 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ KT + G+ ++ EL + + I Sbjct: 125 VLDMGVDPSRIIYAQPCKTNSYVRYVAAEGVRQMTFDNADELYKIAKLFPEAELYLRIL- 183 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A A L + + GV H+GS Sbjct: 184 ---------TDDSSSLCRLSLKFGASLDATDGLLALARELG-LNVVGVSFHVGSGASDPL 233 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + + +Q ++G +++ +DVGGG + D +L + + Sbjct: 234 AFLKAVRDANFVFEQAAAHGFDMKTLDVGGGFCSDDTFEAMAGVLRD--ALDEYFPPHRG 291 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT-------------FVILDVAMNDFMRPT 315 +I EPGR+ V+ + VI+ + D V ++ + Sbjct: 292 VSLIAEPGRYFVSAAFTIACNVIARRTVEDPNGSVNGSLAAAPSYMVYVNDGLYGNFSSI 351 Query: 316 LYDAYHEINYIVNPAG--------------DRLHIHADIVGPICETGDFIALNRKI-ALP 360 ++D H + ++ +G I I GP C+ D I+ + + Sbjct: 352 MFDHQHPVAKVLRSSGNFFYNTTDADSPESPSEGIEYSIWGPTCDGIDRISESVRFSQTI 411 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSR 385 GD LY E GAY + +N Sbjct: 412 DVGDWLYFEDMGAYTKCSATRFNGF 436 >gi|190893472|ref|YP_001980014.1| ornithine decarboxylase [Rhizobium etli CIAT 652] gi|190698751|gb|ACE92836.1| probable ornithine decarboxylase protein [Rhizobium etli CIAT 652] Length = 377 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 147/373 (39%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F +A D+ + YA+KAN V+K LA LGS D S E+ Sbjct: 18 PCLVVDLDVVRDNFHAFRHAMP--DSAIYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A A RI F K +I A G+ F V+S E++ +++ A + Sbjct: 76 MALEAGATAARISFGNTIKKERDIARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L GV H+GSQ+ ++ Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLQS-YGVSFHVGSQMTKV 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ A + + L G ++Q +++GGG Y D + + +FG Sbjct: 185 DAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I K +D I Y Sbjct: 245 NQIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDRLH-IHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D I GP C++ D + LP GD + IE TGAY S Sbjct: 305 PIRTEHDGDEMEPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAV 364 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 365 AFNGFEPLKAYVI 377 >gi|90418748|ref|ZP_01226659.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1] gi|90336828|gb|EAS50533.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1] Length = 377 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 91/365 (24%), Positives = 142/365 (38%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P +E N+ F A D+ + YA+KAN V+K LA LGS D S E+ Sbjct: 18 PCLIVDLDIVEDNFNAFRKALP--DSAIFYAVKANPAPEVLKLLAGLGSNFDCASVAEVE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A RI + K +I A Q G+ F V+ E++ + + A + Sbjct: 76 MALNAGATPRRISYGNTIKKERDIARAHQLGVALFAVDCVEEVEKVARAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + +A+ L V +GV H+GSQ Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPDMAIDVLVHANALGLV-ATGVSFHVGSQQTDT 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 ++ A R + + L G + +++GGG Y D + A +FG Sbjct: 185 GAWDAAIADARFVFEALAEKGIVLTLVNMGGGFPTRYLKDVPAAAEYGRAIFASLRTHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKT-FVILDVAMNDFMRPTLYDAYHEIN 324 N + I+EPGR +V D G++ +V+ + K +D + + + F Sbjct: 245 NRLPETIIEPGRGMVGDAGVVKAEVVLVSKKSDTDANRWVYLDIGKFGGLAETMDEAIRY 304 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 IV I GP C++ D + LP GD + IE TGAY + Sbjct: 305 PIVTRHDGGATEPCVIAGPTCDSADVLYEKTPYPLPLALTVGDEVLIEGTGAYTTTYASV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|332701708|ref|ZP_08421796.1| carboxynorspermidine decarboxylase [Desulfovibrio africanus str. Walvis Bay] gi|332551857|gb|EGJ48901.1| carboxynorspermidine decarboxylase [Desulfovibrio africanus str. Walvis Bay] Length = 397 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 67/392 (17%), Positives = 122/392 (31%), Gaps = 17/392 (4%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V TP + IE+N + D D + ALK + + +A G S Sbjct: 13 RVPTPCFVVDERLIERNLAVLRSVIDRTDCRILLALKGFAMWSTFPLIARSLHGCTASSP 72 Query: 84 GE--LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E L R A ER V + L S S ++ K + G Sbjct: 73 HEARLAREEFARGANEREVHAFAAGYSQADVRELASLCDHIVFNSFNQWKRYRKIVRESG 132 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 ++ RVNP+ + + G + + A + G + + Sbjct: 133 REVECGMRVNPEHSEGAVPIYDPCSPGSRMG--VLRKDFQPAELDSPDGRIVGLHFHTLC 190 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 Q + L + + ++ +++GGG I+ + ++ Sbjct: 191 EQNAD-----ALARTLPHVEDKFGEFFPRLKWLNLGGGHHISRPDYDVDL----LVNEVN 241 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ LEPG + D G+LV V+ + + K ++ A Sbjct: 242 RIKSKYGLQVYLEPGEAIALDTGVLVATVLDVIDNQGKIAILDTSAAAHMPDVLEMPYRP 301 Query: 322 EINYIVNPAG--DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 AG + G C GD I + GD L Y V++ Sbjct: 302 RCVLDGENAGAAGEKTHDYRLAGHSCLAGDVIGAYSFHRELQVGDKLAFMDMAIYSMVKT 361 Query: 380 GTYNSRLLIPEIMV-NGSQFHIIRPRMTFQEL 410 T+N L + +F ++ R +++ Sbjct: 362 TTFNGLQLPSIAKITQEGEFRMV-KRFGYEDF 392 >gi|118472318|ref|YP_890417.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2 155] gi|118173605|gb|ABK74501.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2 155] Length = 459 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 104/397 (26%), Positives = 161/397 (40%), Gaps = 16/397 (4%) Query: 31 CYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 +++ + A+ + + A KA S + V+ A G G ++ S GEL A Sbjct: 44 VIDLDTLDELMASLHAAYPADLPALHTIAAKAISLRPVLARFAAAGFGCEVASPGELELA 103 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 LAA PAERIVF KT EI AL+ G+ E + A + ++ I R Sbjct: 104 LAAGFPAERIVFDSPAKTPTEIARALELGVSFNVDNFEELARIDAAVARNGRPRSVIGVR 163 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VNP A T +ST KFGI + A ++ + +H GSQ +E Sbjct: 164 VNPQTGAGTIDAMSTATSTSKFGIGLADHRDEIIDAFATRPW-LTQLHVHSGSQGMSLEH 222 Query: 210 FHKAFKLLRDLTQQL--RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA---SLIHQYF 264 + +L DL + R+ IQ IDVGGGL + + SD P+ +D+ Sbjct: 223 AAEGVRLTTDLAADIDARAGSRQIQRIDVGGGLPVNFRSDDVTPTFADHRAALQAAAPRL 282 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + ++ E GR L A G +V +V K + + I + R + Sbjct: 283 FDGTYTVVTEFGRALTAKAGTVVARVEYTKVTGGRPIAITHAGVQVATRSIFAPEAWPLR 342 Query: 325 YIVNPAG----DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 V A D D+ GP C TGD +A+ R++ GDL+ + TG Y Sbjct: 343 VEVYDAHGRRRDDPPRVQDVAGPACFTGDMLAVGRELPPVHAGDLVAVPDTGGYYFSTHF 402 Query: 381 TYNSRLLIPEIMVNGSQ-----FHIIRPRMTFQELIE 412 +YN+ V Q + + R T ++++ Sbjct: 403 SYNALPRPAVYTVGTDQHGDRRWSLARRAQTIEQIVA 439 >gi|83773891|dbj|BAE64016.1| unnamed protein product [Aspergillus oryzae] Length = 449 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 79/386 (20%), Positives = 138/386 (35%), Gaps = 32/386 (8%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 PF T I + + + + YA+K NSN +++ LA LG G D S Sbjct: 59 QHDLPFLVADTRRIFQQHERWLQCLP--NIAPFYAVKCNSNIRLLRYLARLGVGFDCASW 116 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GE++ L V RI+F+ K + + +A +SG+ ++ EL+ + A +L Sbjct: 117 GEMKLVLNLGVDPSRIIFAHPCKAVSALQMASRSGVPRTTFDNVDELEKIKDNAPNLRLL 176 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 I + +KFG P+ +L A L V + GV H+GS Sbjct: 177 LRIF----------ADDDTALVSLGNKFGAPLDTTKALLLKAKDLGLV-VDGVSFHVGSG 225 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 ++F A + + + QQ + G ++ +DVGGG + + Sbjct: 226 ASNADTFVTAVQNAKHVFQQGKQLGFDMHVLDVGGGFQDSNFEPMALSLQRAI-----EK 280 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY--- 320 +++ EPGR+ KV++ +K + + + Sbjct: 281 EFPPSTQVMAEPGRYYARSFYTAACKVVARRKQIGQDKLSQSDMLYLNDGIYGCFMNAVA 340 Query: 321 ---------HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEK 370 + + + + GP C+ D IA + + GD + E Sbjct: 341 ENEIYRPILFKQETTSSTEREAGEHRYSVWGPTCDGLDCIAKEATMGCEVKVGDWVKFEN 400 Query: 371 TGAYGAVQSGTYNSRL-LIPEIMVNG 395 GAY S +N I V+ Sbjct: 401 MGAYTTATSTQFNGFPNRYDIIYVDD 426 >gi|241206375|ref|YP_002977471.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860265|gb|ACS57932.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 377 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 90/365 (24%), Positives = 144/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F +A D+ + YA+KAN V+K LA LGS D S E+ Sbjct: 18 PCLVVDLDVVRDNFHAFRHAMP--DSAIYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A A RI + K ++ A G+ F V+S E++ +++ A + Sbjct: 76 MALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L GV H+GSQ+ ++ Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLQS-YGVSFHVGSQMTKV 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ A + + L G ++Q +++GGG Y D + + +FG Sbjct: 185 DAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I K +D I Y Sbjct: 245 NQIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDRLH-IHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D I GP C++ D + LP GD + IE TGAY S Sbjct: 305 PIRTEHDGDEMEPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|170046134|ref|XP_001850633.1| ornithine decarboxylase 1 [Culex quinquefasciatus] gi|167869006|gb|EDS32389.1| ornithine decarboxylase 1 [Culex quinquefasciatus] Length = 438 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 86/419 (20%), Positives = 146/419 (34%), Gaps = 31/419 (7%) Query: 1 MSAFKYFEGSLHA--ENVSLEKLAHVV------QTPFYCYSTTAIEKNYLTFSNAFDGMD 52 M + L + VS L + + + P + + K + + Sbjct: 1 MDLLSVLKCRLEVVDDEVSSRDLVNRLVALGPQEEPLHLIELDTLMKRHYQWLRHLPR-- 58 Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 YA+K+N + A+++T LG G D S+ E+ R L V ERI+F+ KTI+ + Sbjct: 59 VRPFYAIKSNDDAALVETAILLGCGFDCASKAEVHRVLGFGVDRERIIFAQPAKTIESLR 118 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 A + I K + + R D + + +KFG Sbjct: 119 YAREKNIRTVFDSEFELRKLHEHYPEA-----EVLIRYRFD------SRNARVNLGNKFG 167 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 Q + + G+K+ G ++GS E F+ A + R+++ + G + Sbjct: 168 CDPGQEARVLLQLAKDLGIKVVGWCFNVGSACSDAEIFYDAIRKGREISDYAATLGFHFN 227 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 +ID+GGG S +L Y + II EPGR+ A V V Sbjct: 228 YIDLGGGFSGDKDVSIEKYSVHINKALDEFYPDDKGLTIIAEPGRYYSAAAVTSVIPVHG 287 Query: 293 IKKSADKT---------FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 + D T + D F+ + + + GP Sbjct: 288 KRVFRDATDQNKIDKVFYYFNDGIYGTFISAKYRNQPVNPIIWKKRGDCGPAYSSTLFGP 347 Query: 344 ICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI-PEIMVNGSQFHII 401 C+ DF A + ++ D + E GAY V S +N L I + S ++ Sbjct: 348 TCDGSDFFASDIQLPELDISDFVVFENQGAYARVHSCRFNGFCLPKGVIFIRRSAMDLL 406 >gi|116206602|ref|XP_001229110.1| hypothetical protein CHGG_02594 [Chaetomium globosum CBS 148.51] gi|88183191|gb|EAQ90659.1| hypothetical protein CHGG_02594 [Chaetomium globosum CBS 148.51] Length = 459 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 88/373 (23%), Positives = 148/373 (39%), Gaps = 31/373 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L + YA+K N + +++ L+ LG+G D S+ E+ + Sbjct: 80 FFVADLGEVYRQHLRWKLNLPR--VRPFYAVKCNPDTRLLELLSALGTGFDCASKSEIEQ 137 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ KT + Q G+ ++ EL + + I Sbjct: 138 VLNLGVDPSRIIYAQPCKTNSYVRYVAQKGVRQMTFDNADELHKIARLYPDAELFLRIL- 196 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + SL A AS L + + GV H+GS Sbjct: 197 ---------TDDSSSLCRLSLKFGASLDSTDSLLALASELG-LNVVGVSFHVGSGASDPG 246 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + ++ QQ S+G ++Q +DVGGG + A+L + +L Sbjct: 247 AFLKAVRDAHEVFQQAASHGFSLQTLDVGGGFCSDNTFEQMAGVLR--AALDEYFPAHLG 304 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADK----TFVILDVAMNDFMRPTLYDAYHEIN 324 +I EPGR+ + L VI+ + D V ++ + ++D H I Sbjct: 305 INLIAEPGRYYASTAFTLACNVIARRTIEDMSAASYMVYVNDGLYGNFSSIMFDHQHPIA 364 Query: 325 YIVNPAGDRLH-----------IHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 ++ G ++ I I GP C+ D I + + L GD LY E G Sbjct: 365 KVLRSGGRTMYNTPAADATDDGIEYSIWGPTCDGIDRITESIRFPRLLDVGDWLYFEDMG 424 Query: 373 AYGAVQSGTYNSR 385 AY + T+N Sbjct: 425 AYTKCSATTFNGF 437 >gi|259415136|ref|ZP_05739058.1| ornithine decarboxylase [Silicibacter sp. TrichCH4B] gi|259349046|gb|EEW60800.1| ornithine decarboxylase [Silicibacter sp. TrichCH4B] Length = 405 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 79/383 (20%), Positives = 141/383 (36%), Gaps = 20/383 (5%) Query: 18 LEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L+ +A+ + P + A+ + Y+ + + YA+KAN +++ L LGS Sbjct: 36 LQYIANTRFERPTLVIDSEAVARQYMGLARGLGR--ARIHYAVKANPAPEILRRLCALGS 93 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D S E+ AA A RI F K +I A GI + ++ EL+ L + Sbjct: 94 NFDAASRAEIEMCRAAGASAARITFGNTIKKPADIAFAHALGITHYAADAVEELEKLAEH 153 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + KFG L L V G+ Sbjct: 154 APGAHICIRILVEASSA----------DWPLSRKFGCAPDMAVGLMDRCVALGLV-PHGL 202 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GSQ + + + + D+ Q R+ GH+++ +++GGG Y + P Sbjct: 203 SFHVGSQTREPQMWEPILDQVADVWQAARAAGHDLKLLNIGGGFPAGYRNAVMAPEVYAT 262 Query: 257 -ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +++ EPGR LVA+ G + +V+ + + D Sbjct: 263 EVMKRVNARFPDAAEVMAEPGRGLVAEAGAIAAEVMLVSRKHDSDLHRWVYLDIGKFSGL 322 Query: 316 LYDAYHEINYIVNPAGDRLHI-HADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKT 371 I Y + D + + GP C++ D + ++ L + GD + I Sbjct: 323 AETMDEAIRYKITTDRDHETMGACVLAGPSCDSADVLYEKQPVQLPLGLKSGDRVVIHSC 382 Query: 372 GAYGAVQSG-TYNSRLLIPEIMV 393 GAY + +N + +++ Sbjct: 383 GAYTTTYASIGFNGFPPLDVVVL 405 >gi|255524069|ref|ZP_05391030.1| Diaminopimelate decarboxylase [Clostridium carboxidivorans P7] gi|255512206|gb|EET88485.1| Diaminopimelate decarboxylase [Clostridium carboxidivorans P7] Length = 146 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 2/146 (1%) Query: 272 ILEPGRFLVADVGILVTKVISIKK-SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 ++EPGR ++A+ G + V KK K ++ +D M D R LYDA +E Sbjct: 1 MIEPGRSIIANAGTTLYNVGGTKKTYGGKQYIFIDGGMADNPRTALYDAKYEAVVANKVN 60 Query: 331 GDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE 390 + I I G CE+GD I ++ GD++ + TGAY S YN Sbjct: 61 SENSEI-YTIAGKCCESGDIIIKEIELPEVERGDIMAVLTTGAYNYSMSSNYNRIPKPAV 119 Query: 391 IMVNGSQFHIIRPRMTFQELIELDSI 416 + V + I R T++++I D + Sbjct: 120 VFVKEGEAKIAVKRETYEDIIRNDIL 145 >gi|254477427|ref|ZP_05090813.1| Orn/DAP/Arg decarboxylases family 2 [Ruegeria sp. R11] gi|214031670|gb|EEB72505.1| Orn/DAP/Arg decarboxylases family 2 [Ruegeria sp. R11] Length = 395 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 80/383 (20%), Positives = 149/383 (38%), Gaps = 20/383 (5%) Query: 18 LEKLAHV-VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +A + P + A+ + Y + + YA+KAN +++ L +G+ Sbjct: 26 LSYIAQTAFERPTLVVDSQAVARQYAALAQGLGR--ARIHYAVKANPAPQILRRLTRMGA 83 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D S E+ LAA +I F K +I A + GI F ++ +EL+ L Q Sbjct: 84 NFDAASRAEIELCLAAGAKPAQITFGNTIKRPADIAFAHEIGITHFAADATAELEKLAQH 143 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A + KFG SL A L +++SG+ Sbjct: 144 APGAHVCIRLLVEATGA----------DWPLSRKFGCSAAMALSLMDEARDLG-LEVSGL 192 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS-D 255 H+GSQ + + + + + + + GH ++ +++GGG +Y ++ P+ Sbjct: 193 SFHVGSQTREPQMWADTLDQVAAVWKAAKDAGHGLRLLNIGGGFPASYGTEVMAPNQYAR 252 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-ISIKKSADKTFVILDVAMNDFMRP 314 + +I+ EPGR LVA+ G + +V + +K AD + + + F Sbjct: 253 EVMELVNARFPDAAEIMAEPGRGLVAEAGAIAAEVLLVSRKDADDLHRWVYLDIGKFSGL 312 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKT 371 I G+ + GP C++ D + ++ L + GD + I Sbjct: 313 AETMDEAIRYRITTDHGEAQTGPCILAGPSCDSADVLYEKQLYQLPLALKAGDRVVIHAC 372 Query: 372 GAYGAVQSGT-YNSRLLIPEIMV 393 GAY + S +N + +++ Sbjct: 373 GAYTSTYSTVGFNGFPPLDVVVI 395 >gi|333015577|gb|EGK34916.1| diaminopimelate decarboxylase domain protein [Shigella flexneri K-227] Length = 231 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 16/222 (7%) Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH------SDHRPPSSSD 255 I + ++ + +Q+ G ++Q I GGGL I Y + Sbjct: 1 MHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWN 60 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 A K+ +EPGRFLVA G+L+T+V S+K+ + FV++D ND MRP Sbjct: 61 AAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPA 120 Query: 316 LYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGDL 365 +Y +YH I + + GP+CE+GD R + + GD Sbjct: 121 MYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDY 180 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 181 LVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 222 >gi|89094856|ref|ZP_01167789.1| Ornithine decarboxylase [Oceanospirillum sp. MED92] gi|89080911|gb|EAR60150.1| Ornithine decarboxylase [Oceanospirillum sp. MED92] Length = 385 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 98/378 (25%), Positives = 157/378 (41%), Gaps = 19/378 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 LE L TPF + +EK Y+ + F D + YA+KAN VI+ LA GS Sbjct: 14 RLESLIEKYPTPFLAMDLSVVEKRYVELEHGFPEAD--IFYAVKANPADEVIELLASKGS 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI S EL + LA VPAER+ + K I + G+ F +SE++L+ + + Sbjct: 72 SFDIASPQELDKVLAYGVPAERMSYGNTIKKASAIKYFYEQGVRLFATDSEADLQNIAK- 130 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + I RV D + KFG + L A L + GV Sbjct: 131 ---YAPGSNIYIRVLTDGSEGA-----DWPLSRKFGCNPEMAYELAVLAKELG-LNPYGV 181 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS- 254 H+GSQ I+ + A ++ + ++ L G ++ I++GGG Y ++ Sbjct: 182 SFHVGSQQRDIDVWDGAIAKVKVIFERLLEEAGIRLEMINMGGGFPAIYLQKTNEFTTYA 241 Query: 255 -DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + + FG +IILEPGR LV D G++V++V+ I + + Sbjct: 242 EEIKRFLREDFGEDIPRIILEPGRSLVGDAGVIVSEVVLISRKSSTALERWVYTDVGMFN 301 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEK 370 + I Y ++ + + GP C++ D + K+ L GD ++ Sbjct: 302 GLIETLGEAIKYPISSSRQGEEEEVILAGPTCDSLDIMYEQFKYKLPLSLEIGDHVFWYS 361 Query: 371 TGAYGAVQSG-TYNSRLL 387 TGAY S +N Sbjct: 362 TGAYTTSYSSIEFNGFPP 379 >gi|212537713|ref|XP_002149012.1| ornithine decarboxylase [Penicillium marneffei ATCC 18224] gi|210068754|gb|EEA22845.1| ornithine decarboxylase [Penicillium marneffei ATCC 18224] Length = 472 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 83/391 (21%), Positives = 135/391 (34%), Gaps = 51/391 (13%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + ++ + + YA+K N + V++ +A LG G D S+ E+ Sbjct: 80 FYVADMGEVYRQHMRWKMNLGRIKP--FYAVKCNPDPEVLRLMAKLGLGFDCASKTEIDL 137 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 AL + + RI+++ KT + A Q G+ ++ EL + I Sbjct: 138 ALKTGIDSSRIIYAQPCKTRSYLRYARQKGVKQMTFDNTDELYKIKNDFPDAELYLRIL- 196 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L + + GV H+GS + Sbjct: 197 ---------TDDSTSLCRLSMKFGASLDTARPLLDLAKKLE-LNVVGVSFHVGSGAEDPG 246 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q G+ + +DVGGG S Sbjct: 247 AFLKAAQDARWVFDQAAEVGYELHTLDVGGGFCDNTFEKFAAILSKAV-----DDLFPAH 301 Query: 269 CKIILEPGRFLVADVG------ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 +II EPGR+ VA I V + S+ + L+ + ++D H Sbjct: 302 VRIIAEPGRYYVAAAFTLAANVIARRDVFDPQNSSGSYMIYLNDGVYGNFSNIIFDHQHP 361 Query: 323 INYIVNPAGD--------------------------RLHIHADIVGPICETGDFIALNRK 356 + I+ A + I GP C+ D I+ Sbjct: 362 VAQILTCANGSIPPTPGLTASGSSTPDPSAGDSPCAPAGVEYSIWGPTCDGIDVISQQIV 421 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + L GD LY E GAY + +N Sbjct: 422 LPGLVDVGDWLYFEDMGAYTRCSATRFNGFP 452 >gi|312972942|ref|ZP_07787115.1| diaminopimelate decarboxylase domain protein [Escherichia coli 1827-70] gi|310332884|gb|EFQ00098.1| diaminopimelate decarboxylase domain protein [Escherichia coli 1827-70] Length = 231 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 67/222 (30%), Positives = 101/222 (45%), Gaps = 16/222 (7%) Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH------SDHRPPSSSD 255 I + ++ + +Q+ G ++Q I GGGL + Y + Sbjct: 1 MHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWN 60 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 A K+ +EPGRFLVA G+L+T+V S+K+ + FV++D ND MRP Sbjct: 61 AAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPA 120 Query: 316 LYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGDL 365 +Y +YH I + + GP+CE+GD R + + GD Sbjct: 121 MYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDY 180 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 L + TGAYGA S YNSR L+PE++ + Q +IR R T Sbjct: 181 LVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 222 >gi|194671181|ref|XP_001256848.2| PREDICTED: ornithine decarboxylase-like, partial [Bos taurus] Length = 420 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 86/393 (21%), Positives = 145/393 (36%), Gaps = 33/393 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L + A YA+K N ++ ++KTLA +G+G D S+ E++ Sbjct: 40 FYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L + + GV H+GS E Sbjct: 157 ---------TDDSKAVCRLSVKFGATLKTSRLLLERAKELD-IDVIGVSFHVGSGCTDPE 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + G N+ +D+GGG + + + + + + Sbjct: 207 TFVQAISDARCVFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSD 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKS------------------ADKTFVILDVAM 308 +II EPGR+ VA L +I+ K + + Sbjct: 267 SGVRIIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEEESTDRTFMYYVNDGVYGSF 326 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 N + + Y+ N D + + I GP C+ D I + GD + Sbjct: 327 NCILYDHAHVKPLLQKYLPNTQPDEKYYSSSIWGPTCDGLDRIDERCNLLRCMWGDWMLF 386 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHII 401 E GAY + T+N V ++ Sbjct: 387 ENMGAYTVAAASTFNGFQRPTIYYVMSGPTWLV 419 >gi|156554146|ref|XP_001599279.1| PREDICTED: similar to ENSANGP00000020224 [Nasonia vitripennis] Length = 475 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 72/399 (18%), Positives = 132/399 (33%), Gaps = 50/399 (12%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF+ + + + T+ + YA+K N N VIKTLA LG+ D S+ E+ Sbjct: 38 PFHLLDVGDLVRKHRTWVERIPR--VVPHYAVKCNPNPTVIKTLAALGASFDCASKQEIV 95 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 +A VPA+RI+F+ KT +I A + G+ +S EL+ + + Sbjct: 96 TVMAYGVPADRIIFANPVKTPTQIRYAQKVGVSKMTADSMWELRKIRELYPDAKIIIRFR 155 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + G+++ G H+GS ++ Sbjct: 156 CDAAVSDS----------YLGQKFGCDPGEEAVRLIRGCRDLGLELHGFSFHVGSPCGEV 205 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG-- 265 + + + + L RS GH+ + GG S + L + Sbjct: 206 MALSRGIGICKYLIDVARSLGHHNVQLIDIGGGIPGDSDFLLDEVWSYFTRLHRCFVFKE 265 Query: 266 --NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +I G + + + T+ + + ++ Y +I Sbjct: 266 LLFEYKHLIFWLGDYYRTNWNYRSKVKKVTTTTFKHTWALPWYYVTSAVKAVAYVHGKKI 325 Query: 324 NYIVN----------------------------------PAGDRLHIHADIVGPICETGD 349 + N + + + + GP C++ D Sbjct: 326 VHEGNRKKYMYYVTDGAYGSFLDELIQLKARLPDPLNKSHSVNEEKHLSTLWGPTCDSLD 385 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 IA + + + GD LY + GAY + S +N Sbjct: 386 CIAKDVHLPEFQVGDWLYWKDMGAYTSCLSTNFNGFSCP 424 >gi|159185643|ref|NP_357406.2| ornithine decarboxylase [Agrobacterium tumefaciens str. C58] gi|159140777|gb|AAK90191.2| ornithine decarboxylase [Agrobacterium tumefaciens str. C58] Length = 377 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 87/373 (23%), Positives = 151/373 (40%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F ++ ++ + YA+KAN ++K LA LGS D S E++ Sbjct: 18 PCLVVDLDVVRDNFNAFRHSLP--NSAIYYAVKANPAPEILKLLASLGSNFDCASVAEIQ 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A ++RI F K ++ A GI F V+S E++ + + A + Sbjct: 76 MALDAGATSDRISFGNTIKKERDVARAHALGIDLFAVDSHEEVEKVARAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA + ++ GV H+GSQ+ + Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQMG-LESYGVSFHVGSQMMNL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 +++ A + + L G ++Q +++GGG Y D A ++FG Sbjct: 185 DAWDAALADAKRVFASLAKQGIHLQMVNMGGGFPTKYLRDVPAAEEYGQAIDTALRKHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N K I+EPGR +V + G++ +V+ + K +D I Y Sbjct: 245 NQIPKTIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D+ + + GP C++ D + LP GD + IE TGAY S Sbjct: 305 PIRTERDQDEMQPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGTGAYTTTYSAV 364 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 365 AFNGFEPLKAYVI 377 >gi|170738789|ref|YP_001767444.1| ornithine decarboxylase [Methylobacterium sp. 4-46] gi|168193063|gb|ACA15010.1| Ornithine decarboxylase [Methylobacterium sp. 4-46] Length = 390 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 88/369 (23%), Positives = 144/369 (39%), Gaps = 16/369 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY F+ A DT V YA+KAN V+ LA LGS D S E++ Sbjct: 23 PVMVLDLDVVRDNYHAFARALP--DTRVFYAVKANPAPEVLGLLASLGSCFDTASVAEIQ 80 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA-PI 146 ALAA A+RI F K I AL G+ F V+ E+E++ + + A + Sbjct: 81 MALAAGATADRISFGNTIKKERCIARALALGVRLFAVDCEAEVEKIARAAACADVAPEEV 140 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + + K + + + + G++ GV H+GSQ Sbjct: 141 QVFCRILCDGAGAEWPLSRKFGCVPDMAVDVLEHAHRQ-----GLRAYGVSFHVGSQQGN 195 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYF 264 E++ A + ++ G + +++GGG Y + S + ++F Sbjct: 196 TEAWDGALASAAMIFRECAERGIALAMVNLGGGFPTKYLKEVPGVESYGGAIFRALTKHF 255 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVI--SIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 GN + I+EPGR +V + GI+ +VI S K A + + + F Sbjct: 256 GNRMPETIIEPGRGMVGNAGIIEAEVILVSKKSEAADEVRWVYLDIGKFGGLAETMDESI 315 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQS 379 I + + + GP C++ D + LP GD + IE GAY + Sbjct: 316 RYRIRTDHDEDRMVPCVLAGPTCDSADVLYEKIPYPLPVSLSIGDKVLIEGAGAYTTTYA 375 Query: 380 GT-YNSRLL 387 +N Sbjct: 376 AVAFNGFPP 384 >gi|159043924|ref|YP_001532718.1| ornithine decarboxylase [Dinoroseobacter shibae DFL 12] gi|157911684|gb|ABV93117.1| ornithine decarboxylase [Dinoroseobacter shibae DFL 12] Length = 398 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 87/368 (23%), Positives = 138/368 (37%), Gaps = 17/368 (4%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 P A+ Y ++ G T++ YA+KAN +++ LA G G D S G Sbjct: 37 FDRPTLVLDCDAVVAKYHALAHGL-GQGTLIHYAMKANPAPEILRALAAEGCGFDAASRG 95 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E+ ALAA A RI F K +I A GI F ++E+EL + A Sbjct: 96 EIELALAAGATAARISFGNTIKRPSDIAFAHAHGIDLFAADAEAELDKIAAHAPGARVFL 155 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + KFG L A+ L ++ G+ H+GSQ Sbjct: 156 RVLVGATGA----------DWPLSRKFGCAPDTALRLMDRAAFLG-LRPVGLSFHVGSQT 204 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + + ++ R+ GH++ I++GGG Y + Sbjct: 205 RDPGMWSDTLDQMAEIWHAGRARGHDLNLINIGGGFPAFYGDPILEAETYAGRVGALVRA 264 Query: 265 GNLQCKIILEPGRFLVADVGILVTKV-ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ EPGR LVA+ G++V +V + +KS D + + + F Sbjct: 265 RFGDATVMAEPGRGLVAEAGMIVAEVLLVSRKSEDDLCRWVYLDIGKFSGLAETMEEAIR 324 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSG 380 V P + GP C++ D + R + LP + GD + I+ TGAY S Sbjct: 325 YQFVTPHDGGETGPCIMAGPSCDSADVLYEQRPVHLPMALQSGDRILIKATGAYTTTYSS 384 Query: 381 T-YNSRLL 387 +N Sbjct: 385 VGFNGFPP 392 >gi|297185888|gb|ADI24234.1| ornithine decarboxylase [Glomus intraradices] Length = 444 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 78/392 (19%), Positives = 128/392 (32%), Gaps = 48/392 (12%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I + +L + ++ YA+K N + +++ LA LG+G D S+ E++ Sbjct: 44 FFVADLGEIYRQHLRWKTYLPRVEP--FYAVKCNGDPMLLRLLAALGTGFDCASKNEIQT 101 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V I+++ K I A + + ++ EL + + I Sbjct: 102 VLDMGVSPSNIIYANPCKQASFIRFASEHDVKMITFDNADELHKIKRLFPKAQLVIRIL- 160 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + K KFG ++ L A L + GV H+GS Sbjct: 161 ---------ADDSKALIKLGAKFGASLNDTGFLLKTALELGL-NVIGVSFHVGSGCYDEN 210 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS--LIHQYFGN 266 S+ A + R + Q G + +DVGGG ++ SD A Sbjct: 211 SYIDAIRRARFVFNQASEMGFDFHLLDVGGGFSFSHKSDEGITFEKIAAVLGPAIDKHFP 270 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK-SADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++I EPGR+ A + T VI+ + D + D H Sbjct: 271 PNIRVIAEPGRYYAAPAFTIATHVIAKRTVCRDGNEEYVPSMNVDQSNVLATKDDHPTFM 330 Query: 326 IVNPAG--------------------------------DRLHIHADIVGPICETGDFIAL 353 G D + I GP C++ D + Sbjct: 331 YYINDGLYGSLYCILYDHQLVTPKVLTKGGSFLFGEILDEPEYNCFIWGPTCDSIDCVTK 390 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 N + GD LY E GAY + +N Sbjct: 391 NGSLPELFLGDWLYFEDMGAYTIAAATKFNGF 422 >gi|190348193|gb|EDK40604.2| hypothetical protein PGUG_04702 [Meyerozyma guilliermondii ATCC 6260] Length = 432 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 77/385 (20%), Positives = 146/385 (37%), Gaps = 28/385 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ A+ +NY + YA+K N++ VI+ LA +G D S+ E+ + Sbjct: 59 FFVADIGAVVRNYRLWQQELPQ--VQPHYAVKCNTDMRVIEALARMGCNFDCASKTEIDQ 116 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ V RIV++ KT + A G+ V++ EL+ + + G I Sbjct: 117 VLSLGVDPGRIVYANPCKTNSYVRHAKDVGVNLTTVDNVHELQKIKRFHPECGILIRIM- 175 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + + KFG + + +++ GV H+GS ++ Sbjct: 176 ---------TDDESAQCRLSTKFGCSVKTAVEELFPLAKELNLRVRGVAFHVGSGATDLD 226 Query: 209 SFHKAFK--LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 S +KA + + + + +D+GGG + + + Sbjct: 227 SIYKAVQDSRILFDCGIDQFGFKEMNLLDIGGGFQESTFGESSAMVRMSLDKFFSSAYRE 286 Query: 267 -LQCKIILEPGRFLVADVGILVTKVISIKKSADKT-----FVILDVAMNDFMRPTLYDAY 320 + I EPGRF+VA+ L VI+ + + + ++ + + L+D Sbjct: 287 LHPVEFIAEPGRFMVANAFTLAVHVIARRDVREAESEVQAMLYVNDGVYGNLNCILFDHQ 346 Query: 321 HEINYIVNPAG-------DRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 ++ G + I GP C+ D I+ ++A GD LY G Sbjct: 347 VPSASLLTHKGQFVYGSEPDPELSFSIWGPTCDGLDCISGKCQLAFNVEVGDWLYFPNLG 406 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGSQ 397 AY + + ++N E++ S+ Sbjct: 407 AYTSAATTSFNGFKGTAEVVYVNSE 431 >gi|189193697|ref|XP_001933187.1| ornithine decarboxylase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187978751|gb|EDU45377.1| ornithine decarboxylase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 445 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 82/376 (21%), Positives = 139/376 (36%), Gaps = 36/376 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L + + YA+K N + V++ + LG G D S+ E+ Sbjct: 66 FFIADLGEVYRQHLRWKTNLSRVKP--HYAVKCNPDPQVLRLMTALGLGFDCASKNEIET 123 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ KT + A QSG+ ++ EL Q I Sbjct: 124 VLNLGVDPSRIIYAQPCKTKSYVRYAAQSGVKQMTFDNADELYKTKQLFPDAELYLRIL- 182 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L + + GV H+GS + Sbjct: 183 ---------TDDSASLCRLSQKFGASLDTTAELLELAKKL-ELNVVGVAFHVGSGASDPK 232 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q + G N+ +DVGGG + + S + Sbjct: 233 AFIKAVQDARFVFDQAAALGFNMHTLDVGGGFTGDVTFE----PMAAVLSAALDEYFPPH 288 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT------FVILDVAMNDFMRPTLYDAYHE 322 ++I EPGR+ V+ L VI+ + D T + ++ + ++D H Sbjct: 289 IRVIGEPGRYYVSTAFTLACHVIARRTVNDATLGTTSYMLYMNDGVYGNFSSIIFDHQHP 348 Query: 323 INYIVNPAGD------------RLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIE 369 + ++ D + I GP C+ D I+ + GD LY E Sbjct: 349 VPRVLKNGNDVLYDVRRSGYDTPSQVEYSIWGPTCDGIDVISSSCTFPELLDVGDWLYFE 408 Query: 370 KTGAYGAVQSGTYNSR 385 + GAY + +N Sbjct: 409 EMGAYTKCSATRFNGF 424 >gi|330973820|gb|EGH73886.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 402 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 92/396 (23%), Positives = 159/396 (40%), Gaps = 20/396 (5%) Query: 22 AHVVQT-PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 A ++T P + Y A++++ A + YA+KANS +++TLA L SG Sbjct: 15 ARALETDPLAAFFYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGF 73 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 +I S GE+ R A + VFSG GK ++ AL + + ++ES +E+ L Q A Sbjct: 74 EISSGGEIERV-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAE 132 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 G+ P+ R+NP + A +++ FGI + + + G + Sbjct: 133 QAGRVQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHV 192 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLR---SNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 H S +E + Q+ + + + H +VGGG+G+ Y + + Sbjct: 193 HAMSHQMSVERHEQLLDFYLQRWQEWKALARDPSQLTHFNVGGGIGVDYL-NSQQFDWQR 251 Query: 256 YASLIHQYFGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + G I EPGRF+ A G +V+ K S + F++ + F Sbjct: 252 LCRYLEKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRL 311 Query: 314 PTLYDAYHEINY--IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 P H + + + D IVG +C D ++ + + GDLL + Sbjct: 312 PVAQSHDHPVIHLPTAPQSTDSSEHAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLA 371 Query: 372 GAYGA--VQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 GAYG + + + V + R R Sbjct: 372 GAYGYNISHA-DFLCHPRPSQHFVRNGE----RVRQ 402 >gi|296283800|ref|ZP_06861798.1| ornithine/diaminopimelate/arginine decarboxylase,family protein [Citromicrobium bathyomarinum JL354] Length = 420 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 89/401 (22%), Positives = 157/401 (39%), Gaps = 14/401 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F+ +G L L TP + YS ++ A + +A+KAN Sbjct: 23 FEAIDGELAIGGRKASDLVAEAGDTPLFVYSRDMLDARMAALRAAMPESLA-IHFAVKAN 81 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + VI +A L G D+ S GEL + I F+G GK EI A+++G+ Sbjct: 82 PHPDVIAHMAGLVDGFDLASGGELAILQGVGIDGAHISFAGPGKRPREIRAAIEAGVT-L 140 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 N ESE+E + + LG + +A RVNPD + G + +FG+ ++ +L Sbjct: 141 NCESETEAERALEIGRDLGIQPKVAVRVNPDFDMRGSGMKMGGGAK-QFGLDAQRVPALI 199 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 + ++ +L + R G +++GGG GI Sbjct: 200 RHLIDGGAQWRGLHIYTGSQTLEADAVIETQGHVLDLAARIAREVGQPCPALNLGGGFGI 259 Query: 243 AYHSDHRPPSSSDYA-----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 Y + + P + + ++ +E GR+LV + G+ + +++ K+S Sbjct: 260 PYFAGNEPLDIGAIGAALGDRFANLPEELAETEMAIELGRYLVGEAGVYLAQIVDRKESQ 319 Query: 298 DKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 + F+I D ++ + I A++VG +C D +A Sbjct: 320 GEIFLITDGGLHHQLAASGNFGAVVRRNYPLAIATKFDAPAVEVANVVGCLCTPLDRLAD 379 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMV 393 ++ GDL+ + GAYGA S + + EI+V Sbjct: 380 KAELPRAEVGDLVAVFCAGAYGASASPMHFLGQGPALEILV 420 >gi|149184666|ref|ZP_01862984.1| ornithine/diaminopimelate/arginine decarboxylase,family 2 [Erythrobacter sp. SD-21] gi|148831986|gb|EDL50419.1| ornithine/diaminopimelate/arginine decarboxylase,family 2 [Erythrobacter sp. SD-21] Length = 408 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 102/402 (25%), Positives = 179/402 (44%), Gaps = 16/402 (3%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F+ +G L LA + TP + YS T I++ A + YA+KAN Sbjct: 11 FEAIDGELAISGRKASDLAAEARRTPLFVYSQTMIDERVARLRAAMP-NRLRINYAIKAN 69 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S +++ LA L GLDI S GEL A V R+ F+G GK E++ A+++G+ Sbjct: 70 SFAPLLEHLARLVDGLDIASGGELAMVETAGVAGARVSFAGPGKRDAELEAAIRAGVT-L 128 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 N+ESE+E + LG +A RVNPD G + FG+ ++ +L Sbjct: 129 NLESENEARRALAIGEKLGVTPRLAIRVNPDFELKGSGMKMGGGAK-PFGVDAERVPALA 187 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLG 241 G + G+ + GSQ ++ + DL ++ S ++ +++GGG G Sbjct: 188 REIIG-AGCEFRGLHIFPGSQALDADAVIETQASTLDLAHRIASEAGLDLPKLNMGGGYG 246 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQC-----KIILEPGRFLVADVGILVTKVISIKKS 296 I Y + P + + + F NL ++ +E GR++V + G+ +T+++ K+S Sbjct: 247 IPYFNGDTPLDIERVGAALEERFANLPDTLAGAELFIELGRYIVGEAGVYLTRILDRKES 306 Query: 297 ADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 +T+++ D ++ + I + A++VG +C D +A Sbjct: 307 HGETYLVTDGGLHHQLAASGNFGTVVRRNYPLAIASRFDAEPSEVANVVGCLCTPLDRLA 366 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMV 393 ++ GDL+ + GAYGA S + + E++V Sbjct: 367 DKAQLPRAEVGDLVAVFCAGAYGASASPSAFLGQGPAEEMLV 408 >gi|156371417|ref|XP_001628760.1| predicted protein [Nematostella vectensis] gi|156215745|gb|EDO36697.1| predicted protein [Nematostella vectensis] Length = 446 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 84/400 (21%), Positives = 151/400 (37%), Gaps = 21/400 (5%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 Y E N + AF G + A+KAN A++ + G G + S GE+ AL Sbjct: 39 YDLDEFEANVDRVTEAF-GQGCLHAIAVKANPVPALLDLVNKKGQGAECASIGEVLNALK 97 Query: 92 APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVN 151 PAERIV+ KT E+ ++ G++ + K+ I R+N Sbjct: 98 VGFPAERIVYDSPVKTRPELKFLMEQGVHLNVDNFQELQVITELMKELKNVKSTIGLRIN 157 Query: 152 PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFH 211 P ++A K +S + KF + + + + ++ V +H+GSQ +E Sbjct: 158 PVMDAGDIKALSVSCTDSKFAVALTESTRDEIIGWFVDRPWMNCVHVHVGSQSYGVEGLS 217 Query: 212 KAFKLL--RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--- 266 + + L + + ++ ID+GGG+G+ D P+ DY + + + Sbjct: 218 EGARRAVDLALAVNKKVGRNQVEIIDIGGGMGVNREDDSISPTYQDYVNALKKAVPQLFP 277 Query: 267 ---LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI--------LDVAMNDFMRPT 315 + +++ E G+ L A G +V++V KK + I + + + Sbjct: 278 DQGVFKQLVTEFGQSLNAKTGFIVSRVEYTKKVPESDHTIALIHAGADMCLRSCYCPQVA 337 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 Y ++ +I GP+C GD + + GD + + GA Sbjct: 338 KYKRRVQVFDSNGKPKTGQEKLHNIAGPLCFAGDVVRKEVMLPQIERGDYVILHDCGANS 397 Query: 376 AVQSGTYNSRLLIPE--IMVNGSQFH--IIRPRMTFQELI 411 + SR V Q +++ TF EL Sbjct: 398 LATFSRHCSRFAPSVFGYRVKDDQVEFQVLKEAETFDELF 437 >gi|326387492|ref|ZP_08209101.1| ornithine/diaminopimelate/arginine decarboxylase,family 2 [Novosphingobium nitrogenifigens DSM 19370] gi|326208148|gb|EGD58956.1| ornithine/diaminopimelate/arginine decarboxylase,family 2 [Novosphingobium nitrogenifigens DSM 19370] Length = 423 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 87/396 (21%), Positives = 145/396 (36%), Gaps = 14/396 (3%) Query: 9 GSLHAENVSLEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G L V L A TP + Y I A + + YA+KAN + Sbjct: 20 GELVIAGVGARDLVASAGGTPLFVYDAGRIAGRVAALRAAMP-SELGIHYAVKANPFAPL 78 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + +A G DI S GEL + + RI F+G GK E+ A+++G+ Sbjct: 79 LAFMAGHVDGFDIASGGELALLTSVGISGARIGFAGPGKRDGEMVEAVKAGVTLHLESPR 138 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 EL + LG +A RVNPD + G FGI Q+ L Sbjct: 139 -ELDRAIEVGARLGIAPRLAIRVNPDFELA-GAGMRMGGGARPFGIDADQVPDLVRRIVA 196 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 +D + + + + G + ++GGG GI Y Sbjct: 197 SGAEWRGFHVYAGSQSLDSEAIAAAQAATIDCVARLADAAGVAVPVCNLGGGFGIPYFHG 256 Query: 248 HRPPSSSDYASLIHQYFGN-----LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 P + + + + Q + +LE GR+LV + G+ +T+++ K S +TF+ Sbjct: 257 QHPLDIDRIGAELAERLASLPASLAQTRFVLELGRWLVGEAGVYLTEILDRKISRGETFL 316 Query: 303 ILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 ++D ++ + + A +VG +C D + + Sbjct: 317 VVDGGLHHQLAASGNFGSIIRRNYPCAVATRFAAPAEEVAHVVGCLCTPLDRLGDALALP 376 Query: 359 LPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMV 393 PGDL+ + GAYGA S + +++V Sbjct: 377 HAEPGDLVALFCAGAYGASASPSEFLGHGPARQVLV 412 >gi|301106921|ref|XP_002902543.1| diaminopimelate decarboxylase, putative [Phytophthora infestans T30-4] gi|262098417|gb|EEY56469.1| diaminopimelate decarboxylase, putative [Phytophthora infestans T30-4] Length = 527 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 89/429 (20%), Positives = 161/429 (37%), Gaps = 39/429 (9%) Query: 19 EKLAHVV---QTPF-YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 +A + +P ++ A +K AF A+K N + +++ Sbjct: 95 SAIAQKILHDDSPLTNLFNWDAFQKRLANLHTAFPEPQFNHALAVKTNPTRGLLRGACAK 154 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G G + S E + AL+ ++V+ KTI E+ L +G+Y E E++ +N Sbjct: 155 GFGAECASIAEAKHALSLGFEPRKVVYDSPCKTIGELREMLMAGVYINLDNEE-EIRKVN 213 Query: 135 QRAVS--------LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 + + R+NP + T ST KFG+P+ Sbjct: 214 EIFTELGDSEQTKNKHAEQLGLRINPVVGGGTIDATSTATVTSKFGLPLTAETKSRLLEI 273 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGL-GIA 243 + GV +H+GSQ ++ K ++ + + +D+GGG+ + Sbjct: 274 FKQNSWLQGVHVHVGSQGCPLDLLTAGAKRAVAFALEVNAYVGHKQVSVLDIGGGMLTVY 333 Query: 244 YHSDHRPPSSSDYASLIHQ----YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + ++YA ++ + F + II E GR + G+ V+KV +IK A + Sbjct: 334 DGGESEAYDFNEYADVVRRQVPELFTSGFSSIITEFGRSVFVKPGVTVSKVEAIKDWAGQ 393 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINY-------IVNPAGDRLHIHADIVGPICETGDFIA 352 ++ V + F R ++ DI GP+C +GDF+A Sbjct: 394 HIAVVHVGADQFPRTAYLPEQWSHCITVLDSHGRTKTNPSSDYVRQDIAGPLCFSGDFLA 453 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI-------MV-NGSQFHIIRPR 404 + + GD + I TG Y YNSR + V + F +++ R Sbjct: 454 KQLLLPPIQVGDFVVIHDTGGYTMSMHSKYNSRQ----VSSYFAYSAVGDKVNFSMLKER 509 Query: 405 MTFQELIEL 413 T +E + Sbjct: 510 ETTEETLAC 518 >gi|307946080|ref|ZP_07661415.1| lysine/ornithine decarboxylase [Roseibium sp. TrichSKD4] gi|307769744|gb|EFO28970.1| lysine/ornithine decarboxylase [Roseibium sp. TrichSKD4] Length = 376 Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 79/369 (21%), Positives = 137/369 (37%), Gaps = 20/369 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY F+ + DT V YA+KAN ++ L LGS D S GE+ Sbjct: 17 PCVVVDLDIVRDNYHAFARSLP--DTSVYYAVKANPAPEILSLLESLGSCFDCASVGEIE 74 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 LA A+RI + K +I A G+ F V+ E+ + + A + Sbjct: 75 MVLATGASADRISYGNTIKKEKDIAKAYAYGVRLFAVDCVEEVDKIARSAPGSRVFCRVL 134 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + YA L ++ GV H+GSQ + Sbjct: 135 CD----------GIGAEWPLSRKFGCDADMAPDVLEYAHRLG-LQAYGVSFHVGSQQANL 183 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 E++ A + + +++ G +++ +++GGG Y D + A Sbjct: 184 EAWDLALAMAAGVFKEMALRGIDLKMVNMGGGFPTRYLKDVPGVPTYGTAIFEALCKHFG 243 Query: 268 Q--CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 I+EPGR +V + G++ +V+ I + + + I Y Sbjct: 244 NRLPSTIIEPGRGMVGNAGMIEAEVVLISRKSADDEIRWVYLDIGKFSGLAETMDEAIRY 303 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSG- 380 + D + GP C++ D + ++ + GD + IE GAY S Sbjct: 304 PIRTPKDGDRTAPCVLAGPTCDSVDVMYEKTPYELPVSLSIGDKILIEACGAYTTTYSTV 363 Query: 381 TYNSRLLIP 389 ++N + Sbjct: 364 SFNGFAPLA 372 >gi|332020055|gb|EGI60506.1| Ornithine decarboxylase 1 [Acromyrmex echinatior] Length = 402 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 77/400 (19%), Positives = 144/400 (36%), Gaps = 27/400 (6%) Query: 1 MSAFKYFEGSL---HAENVSL-EKLAHVVQTP---FYCYSTTAIEKNYLTFSNAFDGMDT 53 MS + + + N+ + + + P FY I K + + + Sbjct: 1 MSHLDFKDIQVVNDSVNNIDVIRDIIKTEK-PEDAFYVMDVGDIIKRHQEWISKMP--KV 57 Query: 54 MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 + YA+K NSN VIK LA L + D S+ E+ + + V ERI+F+ K I+ Sbjct: 58 VPHYAIKCNSNSTVIKVLAALNAFFDCASKQEIAQVMQYDVQGERIIFAHPNKLPSHIEY 117 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 + G+ V+SE EL + + I K S KFG Sbjct: 118 SRNVGVERMTVDSEFELTKIKELFPEAKVVIRIRCD----------SKNSPILLGAKFGC 167 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 + + + G+ + G H+G+ +I+++ + ++ + L +S G N Sbjct: 168 DPCKEATYLIQCAQDLGLNLHGFSFHVGTPCLEIDAYLRGIEICKQLIAVAKSIGCNNVK 227 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 + GG + + I ++ +I EPGR+ V L + + S Sbjct: 228 LIDIGGGFSSVSGKELDELAKVINDAIENLDPDI--SVISEPGRYYVDSSFTLASYLHSK 285 Query: 294 K-----KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 + + + ++ + + L + V ++I GP ++ Sbjct: 286 RLAISDDNKTRRMYYMNCGVYNSFFDELLGLQARVPESVFEPKRDEKFLSNIWGPTADSY 345 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 D I + + G+ L GAY S T+N + Sbjct: 346 DLILKDVLLPEFHIGNWLVWRNMGAYTLTLSNTFNGFPIP 385 >gi|170046132|ref|XP_001850632.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167869005|gb|EDS32388.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 433 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 77/384 (20%), Positives = 136/384 (35%), Gaps = 27/384 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + + K + + ++ YA+K+N ++ T LG G D S+ EL+ Sbjct: 37 PLHLIELDNLIKQHYAWLRHLPRVNP--FYAIKSNDEPTIVATSVLLGIGYDCASKSELK 94 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 R LA V +E+I+F+ KTI+ + A + V + + + ++ +A + Sbjct: 95 RVLAHGVNSEKIIFAQPAKTIEALKFARE-----SKVRTVFDSEFELKKIQQYYPEAELL 149 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R D K S KFG + G+ + G ++GS Sbjct: 150 IRYKFD------SKNSRATLGTKFGCNPDTEAPHLLQIAKELGLNVVGWCFNVGSACSDA 203 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + F+ A K R L + G + + D+GGG + A+L + + Sbjct: 204 DIFYHAIKKGRQLCDLAAALGFHFKFFDLGGGFAGDIERYAVHIN----AALDEFFAIDE 259 Query: 268 QCKIILEPGRFLVADVGILVTKVIS---------IKKSADKTFVILDVAMNDFMRPTLYD 318 +C +I EPGR+ A I V + + + + D F + Sbjct: 260 ECTVIAEPGRYYCAATTINVVSIHGKKVLYNAEVPTQIEHIYYYLNDGLSGTFYGVRSDN 319 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + GP C+ GD ++ D L GAY V Sbjct: 320 DPVNPIAWKKINNSQPRYKTTFFGPTCDNGDRFGTGIELPELDISDRLVFPNHGAYTRVY 379 Query: 379 SGTYNSRLLIP-EIMVNGSQFHII 401 + T+N L I + S + ++ Sbjct: 380 ATTFNGFCLPKTVIFIRQSSWKLL 403 >gi|260438735|ref|ZP_05792551.1| carboxynorspermidine decarboxylase [Butyrivibrio crossotus DSM 2876] gi|292808861|gb|EFF68066.1| carboxynorspermidine decarboxylase [Butyrivibrio crossotus DSM 2876] Length = 376 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 71/383 (18%), Positives = 121/383 (31%), Gaps = 23/383 (6%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + + TP Y IE+N ++ V A KA SN A+ + SG Sbjct: 3 INELPTPCYVIDENIIEENCKVLADVMKKTGCHVLLAQKAFSNYALYPLIGKYLSGTTAS 62 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E R + E VF+ K D +L FN S+ E Sbjct: 63 GLYEARLGRE-EMGRENHVFAPAYKDEDMDELVKICDHIVFNSISQLEKHKEK------- 114 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 ++ + + +T P + L A L ++G+D Sbjct: 115 -CRNVSIGIRVNPEFSTQNGHEIY-------DPCGKGSRLGVTADLLRNADLTGIDGLHF 166 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + ++ K L + ++ ++ ++ GGG I I Sbjct: 167 HTLCE-QNSDDLKKTLDVVEEKFDFLLRKVKWVNFGGGHHITRKDYDVEL----LCDCIT 221 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 K+ +EPG + + G +T V+ K++ T +ILD + M L Y Sbjct: 222 HIKEKYNVKVYIEPGEAVALNAGYFITTVLDKVKNSGITCLILDGSAACHMPDVLEMPYT 281 Query: 322 EINYIVNPAGDRLHI-HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + + G C GD I R + G+ L Y V++ Sbjct: 282 PPLSEGSIIETPEKEFDYRLGGNTCLAGDIIGNYRFDHDVQIGERLTFCDMAIYSMVKNN 341 Query: 381 TYNSRLLIPEI-MVNGSQFHIIR 402 T+N L M +I+ Sbjct: 342 TFNGIPLPSIYSMDRNGDCRLIK 364 >gi|239993649|ref|ZP_04714173.1| putative diaminopimelate decarboxylase [Alteromonas macleodii ATCC 27126] Length = 180 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 72/182 (39%), Positives = 107/182 (58%), Gaps = 4/182 (2%) Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC-KIILEPGRFLVADVGILVTKVISIKKS 296 GG +++ +PP YA + + + K+ILEPGR + A+ GILVT+V IK+ Sbjct: 1 GGGLGVTYNNEQPPHPKAYAQAMAEKMVGRENLKLILEPGRAIAANAGILVTEVEFIKEG 60 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +K+F I+D AMND +RP LY A+ +I + I D+VGP+CETGDFI +R+ Sbjct: 61 EEKSFAIVDAAMNDLLRPALYSAWQKIIPVKEETTATPRI-YDVVGPVCETGDFIGKDRE 119 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-S 415 +A P DLL + GAYG V + YNSR EIMV+G + ++R R ++L + + Sbjct: 120 LA-IEPTDLLAVRSAGAYGFVMASNYNSRCRPAEIMVDGDKAIVVREREKQKDLWQGEYK 178 Query: 416 IP 417 +P Sbjct: 179 LP 180 >gi|222087145|ref|YP_002545680.1| ornithine decarboxylase protein [Agrobacterium radiobacter K84] gi|221724593|gb|ACM27749.1| ornithine decarboxylase protein [Agrobacterium radiobacter K84] Length = 377 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 91/365 (24%), Positives = 146/365 (40%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F +A D+ + YA+KAN V++ LA LGS D S E+ Sbjct: 18 PCLVVDLDVVRDNFRAFRHAMP--DSAIYYAVKANPAPEVLRLLASLGSNFDCASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A A RI F K ++ A GI F V+S E++ +++ A + Sbjct: 76 MALDAGATAARISFGNTIKKERDVARAHALGISLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L ++ GV H+GSQ+ ++ Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLG-LESYGVSFHVGSQMTKV 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ A + + L G ++Q +++GGG Y D + + + +FG Sbjct: 185 DAWDAALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKAIFASLRAHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N I+EPGR +V + G++ +V+ I K +D I Y Sbjct: 245 NQIPHTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDRLH-IHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D I GP C++ D + LP GD + IE TGAY S Sbjct: 305 PIRTERDGDEMEPCIIAGPTCDSADVLYEKNLYPLPVTLTIGDEVLIEGTGAYTTTYSAV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|307213748|gb|EFN89086.1| Ornithine decarboxylase [Harpegnathos saltator] Length = 409 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 72/384 (18%), Positives = 136/384 (35%), Gaps = 19/384 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + K ++ + N YA+K NS+ VIK LA + D S E+R+ Sbjct: 33 FYVADIGGVIKKHMEWINKIPR--VTPYYAIKCNSDPTVIKVLAAMNVCFDCASMQEIRQ 90 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V ERI+F+ K I A + G+ V+ E+EL + + I Sbjct: 91 VMQHGVKGERIIFAHPAKLPSHIKYARKVGVERMTVDGETELSKIQEFFPEAKVVLRIRC 150 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S KFG ++ + G+ + G H+G+ +++ Sbjct: 151 DAKN----------SPVSLGTKFGCEPYEEAVHLIQRTKDLGLNLHGFSFHVGTPCREVD 200 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ + K L ++ G + GG + + Sbjct: 201 AYRRGIKTCARLIDVAKTIGCRDVELIDIGGGFSGDCGAEIDRFAKVINDATQDLDPAV- 259 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADK----TFVILDVAMNDFMRPTLYDAYHEIN 324 +II EPGR+ V+ L + + S + ++ ++ + + L Sbjct: 260 -RIISEPGRYYVSANFTLASYLHSKRIVSENGELKRMYYMNCGVYNSFLDELLGLQSRRP 318 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 ++ + + + GP ++ D I + + GD L + GAY S T+N Sbjct: 319 RLLFEPINDEEFSSILWGPTADSYDLIVKDVPLPELYVGDWLVWKDMGAYTLSLSNTFNG 378 Query: 385 RLLIPEI-MVNGSQFHIIRPRMTF 407 + + V SQ+ + +F Sbjct: 379 FPIPAVMPFVRKSQWLVSVKMESF 402 >gi|227498071|ref|ZP_03928244.1| diaminopimelate decarboxylase [Actinomyces urogenitalis DSM 15434] gi|226832509|gb|EEH64892.1| diaminopimelate decarboxylase [Actinomyces urogenitalis DSM 15434] Length = 411 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 94/399 (23%), Positives = 163/399 (40%), Gaps = 35/399 (8%) Query: 51 MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAE---------RIVF 101 YA KA AV + + G G+D S EL L+A + R+ Sbjct: 12 NGGTAFYAGKAFLTTAVGQMVLQEGMGIDTASRIELAVGLSALQEVDGVEAVDRAGRLGL 71 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTL--------NQRAVSLGKKAPIAFRVNPD 153 G KT EI +AL + ++S E+ + + R+ Sbjct: 72 HGNAKTQAEIAVALAHRVGHLVLDSREEVDLAAAAVRGLREAGTYGPEETGAVMVRLTTG 131 Query: 154 INANTHKKISTGKKEDKFGIPIHQIHSLYAY--ASTLPGVKISGVDMHIGSQIDQIESFH 211 ++A H+ I+T ++ KFG+ + + A P + + G+ HIGSQI + F Sbjct: 132 VHAGGHEYIATAHEDQKFGLSVTTGAAREAIDAIIAAPELSLHGLHSHIGSQIMDLAGFR 191 Query: 212 KAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--------HQ 262 +A +++ L ++ R G + +D+GGG GIAY P S + + Sbjct: 192 EAARVVLTLRHEVARDTGILAEEVDLGGGYGIAYTVADPVPPSPAQVARVLADTVRSLCT 251 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA-----DKTFVILDVAMNDFMRPTLY 317 G+ + +EPGR +V + + V +K+ + +V +D M+D +RP LY Sbjct: 252 ELGDSVPHVSVEPGRSVVGPSTLTLYAVTGLKRVELGEGASRLYVSVDGGMSDNIRPALY 311 Query: 318 DAYHEINYIVNPAGDRL-HIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYG 375 DA + + + +VG CE+GD + + + GD+L + TGAYG Sbjct: 312 DAAYTALVANRLPDPAAGLVRSRVVGKHCESGDVVVRDVDLPADLAVGDVLAVPATGAYG 371 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 + YN V+ + + T ++L+ L+ Sbjct: 372 RSMASNYNLFTRPGVAWVHEGEQGWLLRPETVEDLLRLE 410 >gi|326790656|ref|YP_004308477.1| carboxynorspermidine decarboxylase [Clostridium lentocellum DSM 5427] gi|326541420|gb|ADZ83279.1| carboxynorspermidine decarboxylase [Clostridium lentocellum DSM 5427] Length = 377 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 67/387 (17%), Positives = 123/387 (31%), Gaps = 20/387 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V TP Y + KN + + A KA S +A SG+ S Sbjct: 7 KVPTPCYVVDERLLIKNLEILKKVEEEAGCRILLATKAFSMYETFPLIAQYLSGVTSSSL 66 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R + E +++ K + + FN S + ++ + GK Sbjct: 67 HEARLGYE-EMGKEVHIYAAAYKEEEFDKIMHYCNHIVFNSFS--QWNKYKEKVKAAGKT 123 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 R+NP+ + + + + GI + + Sbjct: 124 ISCGLRINPEYAEVETEIYNPCAPKSRMGITLEYFEGEDLEGI-----------EGLHFH 172 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 ++ ++L+ + ++ + H ++ I+ GGG I I Sbjct: 173 AMCEQNSDTLERILKVVEEKFGAYLHQMKWINFGGGHHITRAD----YDLEKLIKCIKHI 228 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG + + G LV+ V+ D ILD + M L Y Sbjct: 229 KETYDIEVYLEPGEAVALNTGYLVSTVL-ETLHNDIDIAILDTSAACHMPDVLEMPYRPQ 287 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 AG++ + C GD I A + GD L Y V++ T+N Sbjct: 288 IIGSGLAGEKA-YTYRLGSATCLAGDVIGDYSFDAPLKEGDRLVFCDMAHYTMVKNNTFN 346 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQEL 410 L ++ + + I +++ Sbjct: 347 GINLPSIVLYSEKEGFKIIKSFGYEDF 373 >gi|288957461|ref|YP_003447802.1| ornithine decarboxylase [Azospirillum sp. B510] gi|288909769|dbj|BAI71258.1| ornithine decarboxylase [Azospirillum sp. B510] Length = 382 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 93/386 (24%), Positives = 148/386 (38%), Gaps = 33/386 (8%) Query: 19 EKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 +K+A QTP +E+NY +A D + YA+KAN ++ LA Sbjct: 3 QKIARFFEEQRPQTPCLVIDLDVVEQNYNDLHDALP--DARIFYAVKANPAAEILGLLAR 60 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 LGS D S E++ ALAA +RI F K +I A + G+ F +SE EL+ + Sbjct: 61 LGSAFDCASVPEIQMALAAGATPDRISFGNTIKKEGDIRRAYELGVRLFAFDSEPELEKI 120 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A I T + + KFG + +L A + V+ Sbjct: 121 ERAAPGARVFCRIL----------TSGEGAEWPLSRKFGCDLAMARALLLKARDMD-VQP 169 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS--DHRPP 251 GV H+GSQ + + A + L ++L G ++ I++GGG Y + Sbjct: 170 YGVSFHVGSQQKDLMQWDHAIFQVAQLFRELEVLGVDLGMINLGGGFPTRYRTDVPECTA 229 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV--------ISIKKSADKTFVI 303 + +FGN + I+EPGR +V GI+ ++V K+ Sbjct: 230 YGQAIFDSLRTHFGNHLPETIVEPGRGMVGSAGIIESEVVLVSRKSAEDAKRWVYLDIGK 289 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI---ALNRKIALP 360 Y + ++ D + GP C++ D + A R Sbjct: 290 FGGLAETMDEAIQYPIEVLGDEAIDGQDD-DREAVILAGPTCDSADVLYERAEYRMPMGL 348 Query: 361 RPGDLLYIEKTGAYGAVQSGT-YNSR 385 + GD + I TGAY S +N Sbjct: 349 KAGDRVRIHATGAYTTTYSAVCFNGF 374 >gi|167383073|ref|XP_001736394.1| ornithine decarboxylase [Entamoeba dispar SAW760] gi|165901251|gb|EDR27353.1| ornithine decarboxylase, putative [Entamoeba dispar SAW760] Length = 413 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 78/364 (21%), Positives = 135/364 (37%), Gaps = 24/364 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + T EK + C+A+K N ++K L +LG G D S E++ Sbjct: 28 FWIFDTKGAEKAVERWKKNMP--TVRPCFAVKCNPEPHLVKLLGNLGCGFDCASLNEIKE 85 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L E I +S K +++ A GI V+S E++ + + A +G I Sbjct: 86 VLDLGFSPEDITYSQTFKPYNQLIEASHLGIRHTIVDSIDEVQKIAKYAPEMGVMIRI-- 143 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + D +A G +++ I + +I G+ + GV H+GS + Sbjct: 144 -MENDTSAGHVFGEKFGLHDNEVEIVLKEIKD--------KGLNLDGVHFHVGSDSHNSQ 194 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 F KA R++ G ID+GGG + ++ I + Sbjct: 195 IFTKALTKARNVVTLAEQFGMKPYLIDIGGGFSQIAPFEEF---ATTIEKTIKELEFPEG 251 Query: 269 CKIILEPGRFLVADVGILVT-----KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + I EPGR+L ++V LV +V + + D F ++ Sbjct: 252 TRFIAEPGRYLASNVFHLVCSLHGKRVRIHNEKKQIEYTSGDGLHGSFGCCIWFEKQKIC 311 Query: 324 NYIVNPAGDRLHIH-ADIVGPICETGDFIALNRKIALPRPG-DLLYIEKTGAYGAVQSGT 381 + + ++ + I GP C D +A+ + PG D L GAY + Sbjct: 312 ECVTQIINENTKMYESIIYGPSCNGSDKVAIQ-DLPEMEPGKDWLLFPNMGAYTISMATN 370 Query: 382 YNSR 385 +N Sbjct: 371 FNGF 374 >gi|260437385|ref|ZP_05791201.1| putative pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Butyrivibrio crossotus DSM 2876] gi|292810298|gb|EFF69503.1| putative pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Butyrivibrio crossotus DSM 2876] Length = 402 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 82/412 (19%), Positives = 146/412 (35%), Gaps = 26/412 (6%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVI 68 + ++KL + FY + +KNYL NAF + + Y+ K N + Sbjct: 1 MTINKTIIKKLRNEYGDAFYLLDSEQFKKNYLELKNAFSELYSNFNIAYSYKTNYTPKLC 60 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 K + L ++VSE E A+ V ERI+++G K D++ L G N++S Sbjct: 61 KIVNELEGYAEVVSEMEAELAIKCGVKPERIIWNGPIKNPDKLKEYLHMG-VTVNMDSIE 119 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E + + + A K + R N D+ +FG I+ Sbjct: 120 EAEYIQKLAEVTEKTLNVGIRCNYDVKDGVVS---------RFGFDIYSEEFKKVLDIVT 170 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 + V+ Q+E + K + +L ++ I G + + Sbjct: 171 HTTNLHFVNFQCHFAKRQVEYWPARAKGMLELLDRINVIPERIDIGGGIFGKMPDFLKEQ 230 Query: 249 RPPSSSDYASLIHQY---------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 P Y ++ ++I+EPG LV D V V +IK K Sbjct: 231 FPYEVPGYKKYAKSAAAVFAEYFNDKKIKPELIIEPGSALVGDCMKFVGTVKTIKNVRGK 290 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + + ++ + I + + DIVG C GD + N Sbjct: 291 YIASVLGSQ---KNISMTGVNPPMEVIHMGRTTKDYKDLDIVGFTCIEGDVLYKNYN-GK 346 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 D+L I G+Y V + P + ++G + +I+ TF+++ Sbjct: 347 LALDDVLVISNCGSYSLVMKPPFI-LPNFPVLDISGEEIEVIKRAETFEDIF 397 >gi|84500171|ref|ZP_00998437.1| decarboxylase, pyridoxal-dependent [Oceanicola batsensis HTCC2597] gi|84392105|gb|EAQ04373.1| decarboxylase, pyridoxal-dependent [Oceanicola batsensis HTCC2597] Length = 390 Score = 146 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 72/376 (19%), Positives = 140/376 (37%), Gaps = 19/376 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 P +E+ Y + YA+KAN + +++ L LGSG D S Sbjct: 28 TFDRPTLVIDVDRVEEQYHALKAGLGR--ARIHYAVKANPQREIVERLVDLGSGFDAASR 85 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E+ L+ E I F K + +I+ A +G+ F ++E EL+ + + A Sbjct: 86 AEIELCLSLGARPENISFGNTVKKVRDIEFAWGAGVTLFAADAEEELEKIAEHAPGAEVY 145 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + + KFG + L A L ++ G H+GSQ Sbjct: 146 IRLIVDASEA----------DWPLSRKFGCARDKAIMLLDMARELG-LRPVGFSFHVGSQ 194 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQ 262 + E + + + + + GH + +++GGG Y + + P++ + Sbjct: 195 TKRAEMWTATLDQVAAVWEAAKEAGHELTLLNIGGGFPAYYGEEIQRPTAYAARVMELIT 254 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT-FVILDVAMNDFMRPTLYDAYH 321 ++ EPGR LVA+ G + +V+ + + ++ + + + F Sbjct: 255 ERFGDVAHVMAEPGRGLVAEAGAIAAEVLLVSRKSENDLHRWVYLDIGKFSGLAETMDEA 314 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNR--KIAL-PRPGDLLYIEKTGAYGAVQ 378 + + GP C++ D + R ++ L R GD I GAY + Sbjct: 315 IRYQFLTERDHEATGPCILAGPSCDSADVLYEKRPVELPLGLRSGDRFIIRNCGAYTSTY 374 Query: 379 SGT-YNSRLLIPEIMV 393 + +N + +++ Sbjct: 375 ASVGFNGFPPLDVVVL 390 >gi|320450162|ref|YP_004202258.1| diaminopimelate decarboxylase [Thermus scotoductus SA-01] gi|320150331|gb|ADW21709.1| diaminopimelate decarboxylase [Thermus scotoductus SA-01] Length = 387 Score = 146 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 109/398 (27%), Positives = 184/398 (46%), Gaps = 21/398 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L + TPFY Y + AF YALKAN +++ L LG Sbjct: 9 ALLEALDRYPTPFYAYDWGRVRAQLARLREAFPF--ARFFYALKANPRLGLLRRLRDLGL 66 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G + VS GE+ RA + +++V++G KT + + + Sbjct: 67 GAEAVSLGEVLRAYRSGFGPDQVVWNGPVKTPEALTALKGREPLVVLDSEGDVGR----- 121 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A + RVNPD+ NTH ++TG+ E +FG+ + L G+ G+ Sbjct: 122 VARYLPGARVLLRVNPDLPVNTHGHLATGRGESQFGVLPEAVPGLVRTIRE-KGLTFLGL 180 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +H+GS + ++E F + + +L L Q+ + +++GGG G+ Sbjct: 181 HLHLGSALSRVEDFLEGYGVLEALYPQVGP----VAVLNLGGGFGLD-------LPLEAL 229 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + ++ LEPGR+LVA+ G+LV++V+ +K++ + +V+LD M +RP L Sbjct: 230 QEPLKSLARLYGAQVWLEPGRYLVAEAGVLVSRVVGLKETR-RRYVLLDAGMTSLIRPAL 288 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 Y A H I + G R D+ GP CE GD +A ++ +P+ G+ L I + GAYGA Sbjct: 289 YGARHPILPLYPREG-REEGIFDLAGPACEAGDILAREVRLPVPQEGEALAILEAGAYGA 347 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 S TY E++ G+ + ++R R ++ L E + Sbjct: 348 SMSLTYLDTPRPLELLWTGAGWEVLRTREPWERLWEGE 385 >gi|126697432|gb|ABO26673.1| ornithine decarboxylase 1 [Haliotis discus discus] Length = 472 Score = 146 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 75/382 (19%), Positives = 131/382 (34%), Gaps = 32/382 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I Y + ++ YA+K N + V+K LA LG+ D S+ E+ + Sbjct: 40 FFIADLGDIVAKYKKWRRLLPRVEP--FYAVKCNDDYGVLKVLADLGTSFDCASKMEIDK 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L + RI+++ K + A + + ++E+EL + I Sbjct: 98 VLNLGISPSRIIYANPCKQTSYVRHAAKRNVDLMTFDNEAELLKVKAVFPDARLVLRILP 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 N + + KFG + L A L + GV H+GS ++ Sbjct: 158 PSNFKV---------RCELGMKFGCHPAKAKQLLETAKELEL-NVVGVSFHVGSGAEEAA 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F A + + Q G +D+GGG + D S H + + Sbjct: 208 AFAVAVEQAHGVFQTGLDMGFPFTLLDIGGGFPGQVTAAISFEEVVDVLSPALDHYFPAS 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK--SADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +II EPGR+ VA L +I+ + L + Y Y Sbjct: 268 SGVQIIAEPGRYFVASAFTLTANIIAKRVVARDKSNHEHLPDQVVTGDDEPAYMYYINDG 327 Query: 325 YIVNPA----------------GDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 + G + + + GP C+ D I + ++ + G+ +Y Sbjct: 328 VYGSFNCLLFDHATVTPSVLQDGSDMTFVSSVWGPTCDGLDCIMEDCRLPEMQIGEWIYF 387 Query: 369 EKTGAYGAVQSGTYNSRLLIPE 390 E GAY + T+N Sbjct: 388 EDMGAYTMCCASTFNGMPRPRV 409 >gi|66045821|ref|YP_235662.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae B728a] gi|63256528|gb|AAY37624.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae B728a] Length = 402 Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 91/396 (22%), Positives = 159/396 (40%), Gaps = 20/396 (5%) Query: 22 AHVVQT-PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 A ++T P + Y A++++ A + YA+KANS +++TLA L SG Sbjct: 15 ARALETDPLAAFFYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGF 73 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 +I S GE+ R A + VFSG GK ++ AL + + ++ES +E+ L Q A Sbjct: 74 EISSGGEIERV-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAE 132 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 G+ P+ R+NP + A +++ FGI + + + G + Sbjct: 133 QAGRVQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHV 192 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLR---SNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 H S +E + Q+ + + + H +VGGG+G+ Y + + Sbjct: 193 HAMSHQMSVERHEQLLDFYLQRWQEWKALARDPSQLTHFNVGGGIGVDYL-NSQQFDWQR 251 Query: 256 YASLIHQYFGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + G I EPGRF+ A G +V+ K S + F++ + F Sbjct: 252 LCRYLEKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRL 311 Query: 314 PTLYDAYHEINYIVNPAGDRL--HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 P H + ++ + IVG +C D ++ + + GDLL + Sbjct: 312 PVAQSHDHPVIHLPSTPQPAASSEQAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLA 371 Query: 372 GAYGA--VQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 GAYG + + + V + R R Sbjct: 372 GAYGYNISHA-DFLCHPRPSQHFVRNGE----RVRQ 402 >gi|167564952|ref|ZP_02357868.1| putative diaminopimelate decarboxylase [Burkholderia oklahomensis EO147] Length = 418 Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 89/396 (22%), Positives = 147/396 (37%), Gaps = 10/396 (2%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYA 58 Y +G LH ++ +LA P + Y N A G+ D + YA Sbjct: 23 DRLHYRDGVLHFCGRNVAELAAAFAEPLFLYDPRRAVDNVERLRGALGGLQDGDFRIHYA 82 Query: 59 LKANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 +KAN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 83 MKANRFRPLLSELRRSPIFGVDACSPEELREALACGFAPERISYTAHGMMPDEAALLAVL 142 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 N ++ S + L S I RVNP + Sbjct: 143 PDVHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGATVTKFGIY 198 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 A ++ +H + ++ +F+ + D + ++ I++G Sbjct: 199 AEQFGAALELAARHGLTVTWLHCHAGCGYLDPQLASFERVLDALDTFVARVPGLRGINLG 258 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GGLG+ + + RP + + +H FG I +EPG F+ D G+LV +V ++ Sbjct: 259 GGLGLPHRATDRPLDLERWRAAVHARFGRRPLSIAIEPGDFIAKDGGMLVLRVAYVELKR 318 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 ++ FV L+ N + P YD E + G + G I E D + + Sbjct: 319 NRRFVGLNGGFNLAIEPAFYDLPCEPVPCIRRPGAA--QSVCVAGNINEALDLWGSDVSL 376 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 PGD + + G Y + S + R E+ + Sbjct: 377 PPVEPGDFVALLNAGGYASSMSSNHCLRGQFRELAL 412 >gi|126323015|ref|XP_001364917.1| PREDICTED: similar to ornithine decarboxylase [Monodelphis domestica] Length = 461 Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 82/374 (21%), Positives = 136/374 (36%), Gaps = 30/374 (8%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 I K +L + A YA+K N N+A++KTLA +G+G D VS+ E++ Sbjct: 42 VADLGDILKKHLRWYKALPQ--ATPFYAVKCNDNRAILKTLAAVGAGFDWVSKTEMQLVQ 99 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 VP E +++ K + +I A+ SG+ +SE EL + + +A Sbjct: 100 NLGVPPEMTIYANPCKQVSQIKYAVNSGVQMMTFDSEVELMKVARAHPKAKLVLRMA--- 156 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 T + + KFG+ + L A L + + GV H+GS E+F Sbjct: 157 -------TDDSKAVCRLSVKFGVTLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPETF 208 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQ 268 +A R + G N+ +D+GGG + + S + + + Sbjct: 209 VQAVFDARCVFDMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEISTVINPALDKYFPPDSG 268 Query: 269 CKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDFMR 313 +II EP R+ VA L + + + D F Sbjct: 269 VQIIAEPCRYYVASAFTLAVNIIAKKVVLKEQTGSDDEDEANDQTFMYYVNDGVYGSFNC 328 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 A+ + P D + + GP C+ D I + GD + E GA Sbjct: 329 ILFDHAHVKPLLQKRPKPDEKYYSSSTWGPTCDGLDRIVKCCDLPEMHVGDWMLFENMGA 388 Query: 374 YGAVQSGTYNSRLL 387 Y + T+N Sbjct: 389 YTVAAASTFNGFQR 402 >gi|167572157|ref|ZP_02365031.1| putative diaminopimelate decarboxylase [Burkholderia oklahomensis C6786] Length = 418 Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 89/396 (22%), Positives = 147/396 (37%), Gaps = 10/396 (2%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYA 58 Y +G LH ++ +LA P + Y N A G+ D + YA Sbjct: 23 DRLHYRDGVLHFCGRNVAELAAAFAEPLFLYDPRRAVDNVERLRGALGGLQDGDFRIHYA 82 Query: 59 LKANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 +KAN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 83 MKANRFRPLLSELRRSPIFGVDACSPEELREALACGFAPERISYTAHGMMPDEAALLAAL 142 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 N ++ S + L S I RVNP + Sbjct: 143 PDVHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGATVTKFGIY 198 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 A ++ +H + ++ +F+ + D + ++ I++G Sbjct: 199 AEQFGAALELAARHGLTVTWLHCHAGCGYLDPQLASFERVLDALDTFVARVPGLRGINLG 258 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GGLG+ + + RP + + +H FG I +EPG F+ D G+LV +V ++ Sbjct: 259 GGLGLPHRATDRPLDLERWRAAVHARFGRRPLSIAIEPGDFIAKDGGMLVLRVAYVELKR 318 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 ++ FV L+ N + P YD E + G + G I E D + + Sbjct: 319 NRRFVGLNGGFNLAIEPAFYDLPCEPVPCIRRPGAA--QSVCVAGNINEALDLWGSDVSL 376 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 PGD + + G Y + S + R E+ + Sbjct: 377 PPVEPGDFVALLNAGGYASSMSSNHCLRGQFRELAL 412 >gi|163851469|ref|YP_001639512.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1] gi|163663074|gb|ABY30441.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1] Length = 388 Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 89/377 (23%), Positives = 155/377 (41%), Gaps = 20/377 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + +NY F+ A DT V YA+KAN V++ LA +GS D S E+ Sbjct: 21 PVMVLDLDVVRENYTAFARALP--DTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK---TLNQRAVSLGKKA 144 ALAA A+R+ F K ++ AL+ GI F V+ ++E++ ++ A + Sbjct: 79 MALAAGATADRVSFGNTIKKERDVVRALKLGIRLFAVDCQAEVEKIVRASEAAGIAAGEV 138 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R+ D A KFG ++ +A + GV H+GSQ Sbjct: 139 QVFCRILCD-GAGA-----DWPLSRKFGCEPEMAVNVLEHAHRHG-LNAYGVSFHVGSQQ 191 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--Q 262 E++ A ++ ++ G + +++GGG Y + A + Sbjct: 192 ANTEAWDGALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTK 251 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKV--ISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 +FGN + I+EPGR +V + G++ +V +S K A+ + + + F Sbjct: 252 HFGNRIPETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDE 311 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAV 377 I + + GP C++ D + LP GD ++IE GAY Sbjct: 312 SIRYAIRTDHDEDRMAPCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTT 371 Query: 378 QSGT-YNSRLLIPEIMV 393 + +N + +I++ Sbjct: 372 YAAVAFNGFPPLAQIVI 388 >gi|159481612|ref|XP_001698872.1| ornithine decarboxylase 2 [Chlamydomonas reinhardtii] gi|158273364|gb|EDO99154.1| ornithine decarboxylase 2 [Chlamydomonas reinhardtii] Length = 535 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 78/374 (20%), Positives = 131/374 (35%), Gaps = 31/374 (8%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y + + + + A + YA+K A++K L LG+G D S+GEL Sbjct: 140 YVVDLASPFRLFKAWRAAMPR--VLPYYAVKCYPEPAILKLLMALGAGFDCASKGELDMM 197 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L V RI+F+ K + A + GI +S SEL + + I Sbjct: 198 LKLGVSPGRIIFAHPCKRGADFRYAREHGITYTTFDSSSELHKIAEMDPEFKCVLRIR-- 255 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 + K+G + + L A A L ++ GV H+GS + + Sbjct: 256 --------ADDPGARVPLGLKYGAEVEEAAGLLAEAKQLGL-EVVGVSFHVGSAAKNLAT 306 Query: 210 FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA-------YHSDHRPPSSSDYASLIHQ 262 F A R + G ++ +D+GGG + ++ A+ Sbjct: 307 FTNAIANARKVFDDAAGMGFKMELLDIGGGFTGHFDECGNVMFGEIANTINAALATYFPP 366 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-----KTFVILDVAMNDFMRPTLY 317 ++I EPGR+ L+T VI + L + +Y Sbjct: 367 GGDLGDVRVIAEPGRYFAETSSTLMTVVIGQRDRPQKDGSTHKDYWLTDGLYGSFNCIVY 426 Query: 318 DAYHEINYIVN------PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 D + IV PA + + + GP C++ D + + + R GD L Sbjct: 427 DGQNPEWRIVRSPILPDPADAKTTYVSTLWGPTCDSADVVYKDVALPELRNGDWLLWPNA 486 Query: 372 GAYGAVQSGTYNSR 385 GAY + +N Sbjct: 487 GAYTVAGACDFNGI 500 >gi|99078088|ref|YP_611346.1| ornithine decarboxylase [Ruegeria sp. TM1040] gi|99035226|gb|ABF62084.1| ornithine decarboxylase [Ruegeria sp. TM1040] Length = 390 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 81/383 (21%), Positives = 139/383 (36%), Gaps = 20/383 (5%) Query: 18 LEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L+ +A+ + P + A+ + Y+ + + YA+KAN +++ L LGS Sbjct: 21 LQYIANTRFERPTLVIDSEAVARQYMGLARGLGR--ARIHYAVKANPAPEILRRLCALGS 78 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D S E+ AA A RI F K +I A GI F ++ EL+ L + Sbjct: 79 NFDAASRAEIEMCRAAGASAARITFGNTIKKPADIAFAHALGITHFAADAVEELEKLAEH 138 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + KFG L L V G+ Sbjct: 139 APGAHVCIRILVEASSA----------DWPLSRKFGCAPDMAVGLMDRCVALGLV-PHGL 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS-D 255 H+GSQ + E + + D+ Q R+ GH+++ +++GGG Y P Sbjct: 188 SFHVGSQTRKPEMWEPILDQVADVWQAARAAGHDLKLLNIGGGFPAGYRDAVMAPQDYAS 247 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +++ EPGR LVA+ G + +V+ + + D Sbjct: 248 EVMKRVNARFPDAAEVMAEPGRGLVAEAGAIAAEVMLVSRKHDSDLHRWVYLDIGKFSGL 307 Query: 316 LYDAYHEINYIVNPAGDRLHI-HADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKT 371 I Y + D + + GP C++ D + ++ L GD + I Sbjct: 308 AETMDEAIRYKITTDRDHETMGACVLAGPSCDSADVLYEKQPVQLPLGLTSGDRVVIHSC 367 Query: 372 GAYGAVQSG-TYNSRLLIPEIMV 393 GAY + +N + +++ Sbjct: 368 GAYTTTYASIGFNGFPPLDVVVL 390 >gi|146413553|ref|XP_001482747.1| hypothetical protein PGUG_04702 [Meyerozyma guilliermondii ATCC 6260] Length = 432 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 76/385 (19%), Positives = 144/385 (37%), Gaps = 28/385 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ A+ +NY + YA+K N++ VI+ LA +G D S+ E+ + Sbjct: 59 FFVADIGAVVRNYRLWQQELPQ--VQPHYAVKCNTDMRVIEALARMGCNFDCASKTEIDQ 116 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RIV++ KT + A G+ V++ EL+ + + G I Sbjct: 117 VLLLGVDPGRIVYANPCKTNSYVRHAKDVGVNLTTVDNVHELQKIKRFHPECGILIRIM- 175 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + + KFG + + +++ GV H+G ++ Sbjct: 176 ---------TDDESAQCRLSTKFGCSVKTAVEELFPLAKELNLRVRGVAFHVGLGATDLD 226 Query: 209 SFHKAFK--LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 S +KA + + + + +D+GGG + + Sbjct: 227 SIYKAVQDSRILFDCGIDQFGFKEMNLLDIGGGFQELTFGESSAMVRMSLDKFFSSAYRE 286 Query: 267 -LQCKIILEPGRFLVADVGILVTKVISIKKSADKT-----FVILDVAMNDFMRPTLYDAY 320 + I EPGRF+VA+ L VI+ + + + ++ + + L+D Sbjct: 287 LHPVEFIAEPGRFMVANAFTLAVHVIARRDVREAESEVQAMLYVNDGVYGNLNCILFDHQ 346 Query: 321 HEINYIVNPAG-------DRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 + ++ G + I GP C+ D I+ ++A GD LY G Sbjct: 347 VPLASLLTHKGQFVYGSEPDPELSFSIWGPTCDGLDCISGKCQLAFNVEVGDWLYFPNLG 406 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGSQ 397 AY + + ++N E++ S+ Sbjct: 407 AYTSAATTSFNGFKGTAEVVYVNSE 431 >gi|21243907|ref|NP_643489.1| diaminopimelate decarboxylase [Xanthomonas axonopodis pv. citri str. 306] gi|21109513|gb|AAM38025.1| diaminopimelate decarboxylase [Xanthomonas axonopodis pv. citri str. 306] Length = 398 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 81/373 (21%), Positives = 139/373 (37%), Gaps = 7/373 (1%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y A++ + + YA KAN+ +++TLA G + S GEL Sbjct: 27 AYVYDLAALDTHAAWMRAQLP-AQCELFYAAKANAEPPILRTLAPHVDGFEAASGGELAW 85 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A P ++F G GK E+ A +VES SEL+ L + A G+ P+ Sbjct: 86 L-HAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHVESLSELERLAEVASHAGRCVPVFL 144 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+N + ++ G + FG+ +H+ P ++++G H+ S Sbjct: 145 RMNIAVPGAQSTRLMMGGQPSPFGLDPCDLHAAMQRLQASPSLRLAGFHFHLMSHQRDAT 204 Query: 209 SFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS--LIHQYFG 265 + QQ R ++ GGG G+ Y + + + + Sbjct: 205 AQLHLVAAYLRTVQQWRQAYALGPLRVNAGGGFGVDYLAPEASFDWAGFCAGLPALLREH 264 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPGR++ A G + +V+ +K+S F I + F P H Sbjct: 265 ATDLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQGHDHPFRV 324 Query: 326 IVNPAGDR-LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YN 383 + +VG +C D +A ++ +A PGD L GAY S + Sbjct: 325 LRGERAPVLRDTPVTLVGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQRFL 384 Query: 384 SRLLIPEIMVNGS 396 + + Sbjct: 385 MHPAPQMVFLTEG 397 >gi|262052059|ref|ZP_06024269.1| hypothetical protein SA930_0163 [Staphylococcus aureus 930918-3] gi|259160037|gb|EEW45071.1| hypothetical protein SA930_0163 [Staphylococcus aureus 930918-3] Length = 400 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQIYYAMKANSERKILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALAMPKIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKAWSEKHRFPLKHINLGGGIGVNYADLTNQFEWDNFVERFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK + IL F P + H + Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|229542370|ref|ZP_04431430.1| carboxynorspermidine decarboxylase [Bacillus coagulans 36D1] gi|229326790|gb|EEN92465.1| carboxynorspermidine decarboxylase [Bacillus coagulans 36D1] Length = 375 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 72/382 (18%), Positives = 113/382 (29%), Gaps = 22/382 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP Y +E N + + A KA S A+ + SG Sbjct: 4 EELPTPCYVIDEQKLEDNLKVLNGVMKRTGCKIVLAQKAFSMFALYPLIGKYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + E +FS + + ++ FN S+ E A Sbjct: 64 LYEARLGHE-EMGKENHIFSAAYREGEIDEIVSICDHIIFNSFSQLEKFKGRVLAGGKKV 122 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + H +FG+ Q L GV Sbjct: 123 GLRINPECSTQT---GHAIYDPCSPGSRFGVTQAQFRPAL-----LDGVTGLHFHTLCQQ 174 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 D +E+ A + ++ ++ I+ GGG I P I + Sbjct: 175 NADDLETTLDAVE------EKFGEWLPQMEWINFGGGHHITREDYDIPL----LEKCIKR 224 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ LEPG + + G LVT V+ ILD + + M L Y Sbjct: 225 MQDKYGLEVYLEPGEAVALNAGYLVTTVLDTV-KNGMDIAILDTSASCHMPDVLEMPYRP 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 G++ + G C GD I + GD L + Y V++ T+ Sbjct: 284 PLIGAGEPGEKP-YTYRLGGQTCLAGDTIGDYSFDKPLKEGDRLVFDDMAIYTMVKNTTF 342 Query: 383 NSRLLIPE-IMVNGSQFHIIRP 403 N L I I+R Sbjct: 343 NGMPLPAIAIQYKNGDCTIVRE 364 >gi|163758927|ref|ZP_02166014.1| putative ornithine, dap, or arginine decarboxylase protein [Hoeflea phototrophica DFL-43] gi|162284217|gb|EDQ34501.1| putative ornithine, dap, or arginine decarboxylase protein [Hoeflea phototrophica DFL-43] Length = 377 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 86/365 (23%), Positives = 148/365 (40%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+++F A D+ + YA+KAN +++ LA LGS D S E+ Sbjct: 18 PCLVVDLDVVRDNFVSFRKALP--DSSIYYAVKANPAPEILRLLAGLGSNFDCASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A + R+ + K +I A G+ F V+S E++ + + A + Sbjct: 76 MALKAGATSARVSYGNTIKKERDIARAHALGVTLFAVDSHEEVEKIARAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L V GV H+GSQ+ ++ Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLVS-HGVSFHVGSQMTKL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 +++ A R + +L G +++ +++GGG Y D + A ++FG Sbjct: 185 DAWDAALSDARRVFDKLAQQGIHLKMVNMGGGFPTRYLKDIPTAQAYGQAIHGSLRKHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G + +V+ + + +D+ V I Y Sbjct: 245 NNIPETIIEPGRGMVGNAGAIKAEVVLVSRKSDEDDVRWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDRLH-IHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + GP C++ D + +P GD + IE TGAY S Sbjct: 305 SIVTPRDGDEMEPCVLAGPTCDSADVLYEKTPYPMPVSLTIGDEVLIEGTGAYTTTYSAV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|241667667|ref|ZP_04755245.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876212|ref|ZP_05248922.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842233|gb|EET20647.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 403 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 87/391 (22%), Positives = 156/391 (39%), Gaps = 9/391 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +LE + +PF+ Y +E + + + YALKAN +IK Sbjct: 9 NLESICKESNSPFFYYDLDMLEAHAKELKK----LPVKLWYALKANPLSRIIKIFDEQKI 64 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S GEL + L V E I+ +G K+ +++ L G+ F +ES ++ + L+ Sbjct: 65 SFDVASIGELDQVLDQGVNPENILHTGPAKSYSQLEYFLAQGVRIFVIESINQFRDLSDL 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISG 195 K I RV N + G FG+ ++ + + + I G Sbjct: 125 VERKNIKVEILLRVQLVWNDQESNVLGGGGCVTPFGLSMNDWKDFFNSSPSISNNMSIIG 184 Query: 196 VDMHIGSQIDQIESFHKAFK-LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + I ++ + +K + + L + +++ ID+GGG+G+ Y+S + S + Sbjct: 185 MHCFQWGNILCLDKLSQIWKTITKALLDLSEAINVSLKIIDLGGGIGVPYNSSQKAVSIN 244 Query: 255 DYASLIHQYFG-NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 D S + + LE GR+ VA+ G+ +TKV+ K + ++ D +R Sbjct: 245 DLISCFNNLKKEFPDIEYWLELGRYAVAESGVYLTKVVDRKSVNNINLLVTDGGAQHLVR 304 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P L ++ I GP+C + D + D L ++TGA Sbjct: 305 PALTGESFP-IELLREESCSETNDFQIHGPLCTSLDKAGIASLPKDIGLNDYLIFKQTGA 363 Query: 374 YGAVQSGT-YNSRLLIPEIMVNGSQFHIIRP 403 YG +S + L EI+ +R Sbjct: 364 YGFTESMPFFLCHNLPAEIIFYKGHLQTVRQ 394 >gi|254384891|ref|ZP_05000227.1| lysine/ornithine decarboxylase [Streptomyces sp. Mg1] gi|194343772|gb|EDX24738.1| lysine/ornithine decarboxylase [Streptomyces sp. Mg1] Length = 458 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 98/383 (25%), Positives = 158/383 (41%), Gaps = 20/383 (5%) Query: 49 DGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTI 108 G + +A+KA V++ LA G G ++ S GEL A AA V ER+V KT Sbjct: 66 PGTPVLHAFAVKAAPLVPVLRLLAEAGLGCEVASPGELALARAAGVAPERMVLDSPAKTS 125 Query: 109 DEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 E+ AL GI N ++ EL+ ++ A + +PI RVNP A T +ST Sbjct: 126 RELREALALGIA-VNADNRQELERIDALAGAGPPASPIGIRVNPQTGAGTIDALSTATAT 184 Query: 169 DKFGIPIHQI-HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 KFG+P+ + + I+ + H GSQ + + + L L +++ + Sbjct: 185 SKFGVPLRDGGARAWLVRACAERPWITRLHTHSGSQGVPLALIAEGVRELHALAEEINAA 244 Query: 228 --GHNIQHIDVGGGLGIAYHSDHRPPSSSDYA---SLIHQYFGNLQCKIILEPGRFLVAD 282 I +D+GGGL + + SD R P + Y + ++ E GR L+A Sbjct: 245 AGRRQIDTLDIGGGLPVNFASDERTPGYAQYVAELRAAAPALFDGSYGLVTEFGRSLLAK 304 Query: 283 VGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH------- 335 G+++ +V K + + + + R A + + AG Sbjct: 305 HGLVLARVEYTKSTGGRPIALTHAGVQLATRTVYAPAAWPLRILPYDAGGAPKPGAPAVP 364 Query: 336 -IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + DI GP C GD +A R++ PGDL+ + TGAY YNS Sbjct: 365 VVAQDIAGPACFAGDLLATARELPQLSPGDLIGVPDTGAYFFTAHYGYNSLPRPAVYGFR 424 Query: 395 ---GSQFH--IIRPRMTFQELIE 412 + + RP + E++ Sbjct: 425 VGPRGEVRFGLARPAQSLAEIVA 447 >gi|158300267|ref|XP_320233.4| AGAP012308-PA [Anopheles gambiae str. PEST] gi|157013076|gb|EAA00673.4| AGAP012308-PA [Anopheles gambiae str. PEST] Length = 414 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 118/363 (32%), Gaps = 25/363 (6%) Query: 51 MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDE 110 YA+K N + A++ TLA LG+G D SE E+R LA V +RI+F+ K++ Sbjct: 62 PRVTPFYAVKCNDDPAILATLAALGTGFDCASEAEMRTILALGVTPDRIIFAHPIKSVQA 121 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 + A GI ++E EL+ + + I K Sbjct: 122 LAFAKAHGIRRMTFDNECELEKVAREYPEAELVLRIR----------HDSDRVLIALGKK 171 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 FG + + GV + GV H+G + F+ A R + + Sbjct: 172 FGCDARGDGRVLLARAQALGVAVIGVSFHVGCGSLDADCFYHAIASARSVFDYAKDELGM 231 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL---EPGRFLVADVGILV 287 + GG + + + + ++F Q + + EPGRF V L+ Sbjct: 232 RLWLLDVGGGFPGDNDKPIDQYAEAVSRALQEFFPPEQDEEVYVLGEPGRFYVGSAATLL 291 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNP-----------AGDRLHI 336 T V K D I + + Sbjct: 292 TTVQGKKIVRDDAGQIQQMMYYINDGVFGTLFDWLSLREIKDLKRAVPLVRREREHEPAF 351 Query: 337 HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE-IMVNG 395 I GP C++ D + + GD + E GAYG + +N + V Sbjct: 352 PTTIWGPTCDSTDIVCEDVPYPEHHIGDYIVFENLGAYGMTFATNFNGFPKPTVQVYVKE 411 Query: 396 SQF 398 + Sbjct: 412 HTW 414 >gi|307330569|ref|ZP_07609710.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] gi|306883818|gb|EFN14863.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] Length = 448 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 91/384 (23%), Positives = 153/384 (39%), Gaps = 21/384 (5%) Query: 49 DGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTI 108 G + +A+KA + V++ LA G G ++ S GEL A AA V +RIV KT Sbjct: 50 PGTPVLHAFAVKAAALVPVLRLLADEGLGCEVASPGELALARAAGVTPDRIVLDSPAKTP 109 Query: 109 DEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 +E+ AL GI + + AP+ R+NP + + +ST Sbjct: 110 EELREALDLGIALNADNPQELDRLGALVGDRADPPAPLGLRINPQVGGGSIDAMSTATAT 169 Query: 169 DKFGIPIHQIHSLYAYASTL-PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 KFG+ + + T ++ + H+GSQ +E ++ +L +++ Sbjct: 170 SKFGVALQDPGAREWVVRTFAERPWLTRLHAHVGSQGCPLELMAAGIRVAYELAEEINGA 229 Query: 228 --GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF---GNLQCKIILEPGRFLVAD 282 I +D+GGGL + + SD P +YA L+ + + K++ E GR L+A Sbjct: 230 VGRQQIDALDIGGGLPVNFASDEITPGYREYAQLLRTTVPGLFDGRYKLVTEFGRSLLAK 289 Query: 283 VGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH------- 335 G+++ +V K + + + R + A R Sbjct: 290 SGLVLARVEYAKSAGGRLIAVTHAGAQLATRTVFAPEAWPLRVTAYDAEGRPKAGGSSDG 349 Query: 336 -IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN 394 + DI GP C GD +A +R + GDL+ + TGAY YNS + Sbjct: 350 QVPQDIAGPCCFAGDLVARDRPLPELAAGDLVGLLDTGAYYFSNHFAYNSLPRPGIYGFD 409 Query: 395 -----GSQFH--IIRPRMTFQELI 411 G + +R T E++ Sbjct: 410 ATGSTGDEVRFATVRKPQTVDEIV 433 >gi|254561232|ref|YP_003068327.1| ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens DM4] gi|254268510|emb|CAX24467.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens DM4] Length = 388 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 90/377 (23%), Positives = 154/377 (40%), Gaps = 20/377 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY F+ A DT V YA+KAN V++ LA +GS D S E+ Sbjct: 21 PVMVLDLDVVRDNYTAFARALP--DTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK---TLNQRAVSLGKKA 144 ALAA A+R+ F K +I AL+ GI F V+ ++E++ ++ A + Sbjct: 79 MALAAGATADRVSFGNTIKKERDIVRALKLGIRLFAVDCQAEVEKIVRASEAAGIAAGEV 138 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R+ D A KFG ++ +A + GV H+GSQ Sbjct: 139 QVFCRILCD-GAGA-----DWPLSRKFGCEPEMAVNVLEHAHRHG-LHAYGVSFHVGSQQ 191 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--Q 262 E++ A ++ ++ G + +++GGG Y + A + Sbjct: 192 ANTEAWDGALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTK 251 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKV--ISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 +FGN + I+EPGR +V + G++ +V +S K A+ + + + F Sbjct: 252 HFGNRIPETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDE 311 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAV 377 I + + GP C++ D + LP GD ++IE GAY Sbjct: 312 SIRYAIRTDHDEDRMAPCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTT 371 Query: 378 QSGT-YNSRLLIPEIMV 393 + +N + +I++ Sbjct: 372 YAAVAFNGFPPLAQIVI 388 >gi|160881179|ref|YP_001560147.1| carboxynorspermidine decarboxylase [Clostridium phytofermentans ISDg] gi|160429845|gb|ABX43408.1| carboxynorspermidine decarboxylase [Clostridium phytofermentans ISDg] Length = 379 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 61/387 (15%), Positives = 119/387 (30%), Gaps = 20/387 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + TP Y +++N + D + A KA S + +G S Sbjct: 8 QIPTPSYVVEERLLKRNLSLLKSIMDQTGCKILLAQKAFSMFYYYPLIGSYLAGTTASSL 67 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R + E +F+ + + + FN + + GKK Sbjct: 68 FEARLGKE-EMGGEVHIFNPAYQESEMEQIISLCDHIVFNTPK--QWLKYKEVIQKSGKK 124 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 RVNP + + K + G + I + Sbjct: 125 VSCGLRVNPQYSEIEVDLYNPCAKGSRLGTILDNIQEEDLEGL-----------EGLHFH 173 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 ++ + L+ + ++ ++ I+ GGG +H S I Sbjct: 174 TMCEQNSDVLVRTLKVVEEKFSFLLKKMKWINFGGG----HHITREDYDVESLISSILHM 229 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG + + G LVTKV+ + + ++ A + + + Sbjct: 230 KETYGIEVYLEPGEAIGLNTGYLVTKVLDVCGEHGECAILDTSAECHMP--DVLEMPYRP 287 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 I + GP C GD + + GD+L Y V++ T+N Sbjct: 288 EIIGAGKAGEKAYTYRLGGPTCLAGDVVGEYSFDEPLKEGDILVFCDMSHYSMVKNNTFN 347 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQEL 410 L + + +I + +++ Sbjct: 348 GINLPSIVAYTEKEGIVIVKQFGYEDF 374 >gi|258424237|ref|ZP_05687118.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A9635] gi|257845503|gb|EEV69536.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A9635] Length = 400 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 86/371 (23%), Positives = 147/371 (39%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y ++ + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLDELKSHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FG+ ++ + A + + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGVSEDEVDDVIEAALAMSNIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + E GRF+VA +G VT+V+ IKK + IL F P + H Sbjct: 258 MGDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|239834475|ref|ZP_04682803.1| Lysine/ornithine decarboxylase [Ochrobactrum intermedium LMG 3301] gi|239822538|gb|EEQ94107.1| Lysine/ornithine decarboxylase [Ochrobactrum intermedium LMG 3301] Length = 377 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 87/365 (23%), Positives = 146/365 (40%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P T + NYL+F A + YA+KAN +++ LA LGS D S E+ Sbjct: 18 PCLVVDTDVVRDNYLSFEKALPYS--RIFYAVKANPAPEILRLLASLGSCFDTASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A A RI + K +I A + GI + V+ E++ + + A + Sbjct: 76 MALEAGATANRISYGNTIKKERDIARAFELGIRLYAVDCVEEVEKVARAAPGSRVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + +A +L + GV H+GSQ + Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPAMAIDVLRHAKSLG-LDSYGVSFHVGSQQTDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QYFG 265 ++ +A + + L G ++ +++GGG Y D + ++FG Sbjct: 185 TAWDRALGDAAKVFRTLADEGIVLRMVNMGGGFPTRYLKDVPTAQAYGMVIFDALSKHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVI-SIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 N + I+EPGR +V + G++ T+V+ +K+ + + + + F Sbjct: 245 NRIPETIIEPGRGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRY 304 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 IV P + GP C++ D + LP GD + IE TGAY S Sbjct: 305 QIVTPHDGSETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|218530277|ref|YP_002421093.1| ornithine decarboxylase [Methylobacterium chloromethanicum CM4] gi|218522580|gb|ACK83165.1| Ornithine decarboxylase [Methylobacterium chloromethanicum CM4] Length = 388 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 89/377 (23%), Positives = 153/377 (40%), Gaps = 20/377 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY F+ A DT V YA+KAN V++ LA +GS D S E+ Sbjct: 21 PVMVLDLDVVRDNYTAFARALP--DTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK---TLNQRAVSLGKKA 144 ALAA A+R+ F K ++ AL+ GI F V+ ++E++ ++ A Sbjct: 79 MALAAGATADRVSFGNTIKKERDVVRALKLGIRLFAVDCQAEVEKIVRASEAAGIAAGDV 138 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R+ D A KFG ++ +A + GV H+GSQ Sbjct: 139 QVFCRILCD-GAGA-----DWPLSRKFGCEPEMAVNVLEHAHRHG-LNAYGVSFHVGSQQ 191 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--Q 262 E++ A ++ ++ G + +++GGG Y + A + Sbjct: 192 ANTEAWDGALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTK 251 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKV--ISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 +FGN + I+EPGR +V + G++ +V +S K A+ + + + F Sbjct: 252 HFGNRIPETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDE 311 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAV 377 I + + GP C++ D + LP GD ++IE GAY Sbjct: 312 SIRYAIRTDHDEDRMAPCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTT 371 Query: 378 QSGT-YNSRLLIPEIMV 393 + +N + +I++ Sbjct: 372 YAAVAFNGFPPLAQIVI 388 >gi|220921641|ref|YP_002496942.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060] gi|219946247|gb|ACL56639.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060] Length = 388 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 91/371 (24%), Positives = 147/371 (39%), Gaps = 20/371 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY F+ A DT V YA+KAN V+ LA LGS D S E++ Sbjct: 21 PVMVLDLEVVRDNYAAFARALP--DTRVFYAVKANPAPEVLGLLASLGSCFDTASVVEIQ 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK---TLNQRAVSLGKKA 144 ALAA A+RI F K I AL+ G+ F V+ ++E++ + A + Sbjct: 79 LALAAGATADRISFGNTIKKERCIVRALELGVRLFAVDCQAEVEKIARAAETAGVAPEDV 138 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R+ D A KFG + +A ++ GV H+GSQ Sbjct: 139 QVFCRILCD-GAGA-----EWPLSRKFGCVPEMAVDVLEHAHRQG-LRAYGVSFHVGSQQ 191 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--Q 262 E++ A + ++ G + +++GGG Y + S A + Sbjct: 192 GNTEAWDGALAASAMIFRECAERGIALSMVNLGGGFPTKYLKEVPGVESYGNAIFRALTK 251 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD--KTFVILDVAMNDFMRPTLYDAY 320 +FGN + I+EPGR +V + GI+ +V+ + K +D + + + F Sbjct: 252 HFGNHMPETIIEPGRGMVGNAGIIEAEVVLVSKKSDAADEVRWVYLDIGKFGGLAETMDE 311 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAV 377 I + + + GP C++ D + LP GD + IE GAY Sbjct: 312 SIRYAIRTDHDEDRKVPCVLAGPTCDSADVLYEKTPYPLPVSLSIGDKVLIEGAGAYTTT 371 Query: 378 QSGT-YNSRLL 387 + +N Sbjct: 372 YAAVAFNGFPP 382 >gi|209550966|ref|YP_002282883.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536722|gb|ACI56657.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 377 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 148/373 (39%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P I N+ F +A D+ + YA+KAN V+K LA LGS D S E+ Sbjct: 18 PCLVVDLDVISDNFHAFRHAMP--DSAIYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A A RI F K ++ A G+ F V+S E++ +++ A + Sbjct: 76 MALEAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG + YA L + GV H+GSQ+ ++ Sbjct: 136 ----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLLS-YGVSFHVGSQMTKV 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ A + + L G ++Q +++GGG Y D + + +FG Sbjct: 185 DAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I K +D I Y Sbjct: 245 NQIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRY 304 Query: 326 IVNPAGDRLH-IHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D I GP C++ D + LP GD + IE TGAY S Sbjct: 305 PIRTEHDGDEMEPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAV 364 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 365 AFNGFEPLKAYVI 377 >gi|240138634|ref|YP_002963106.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens AM1] gi|240008603|gb|ACS39829.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase [Methylobacterium extorquens AM1] Length = 388 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 89/377 (23%), Positives = 154/377 (40%), Gaps = 20/377 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY F+ A DT V YA+KAN V++ LA +GS D S E+ Sbjct: 21 PVMVLDLDVVRDNYTAFARALP--DTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK---TLNQRAVSLGKKA 144 ALAA A+R+ F K ++ AL+ GI F V+ ++E++ ++ A + Sbjct: 79 MALAAGATADRVSFGNTIKKERDVVRALKLGIRLFAVDCQAEVEKIVRASEAAGIAAGEV 138 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R+ D A KFG ++ +A + GV H+GSQ Sbjct: 139 QVFCRILCD-GAGA-----DWPLSRKFGCEPEMAVNVLEHAHRHG-LNAYGVSFHVGSQQ 191 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--Q 262 E++ A ++ ++ G + +++GGG Y + A + Sbjct: 192 ANTEAWDGALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTK 251 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKV--ISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 +FGN + I+EPGR +V + G++ +V +S K A+ + + + F Sbjct: 252 HFGNRIPETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDE 311 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAV 377 I + + GP C++ D + LP GD ++IE GAY Sbjct: 312 SIRYAIRTDHDEDRMAPCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTT 371 Query: 378 QSGT-YNSRLLIPEIMV 393 + +N + +I++ Sbjct: 372 YAAVAFNGFPPLAQIVI 388 >gi|224085964|ref|XP_002307756.1| predicted protein [Populus trichocarpa] gi|222857205|gb|EEE94752.1| predicted protein [Populus trichocarpa] Length = 416 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 131/385 (34%), Gaps = 25/385 (6%) Query: 18 LEKLAHVVQT--PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 L ++ +T PFY + + YA+K N + A++ +LA LG Sbjct: 37 LSIISKKQETKEPFYVLDLGEVTALMDKWLMTLPM--VHPFYAVKCNPDPALLGSLAALG 94 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 S D S E+ L+ V RIV++ K I A G+ +S+ EL + + Sbjct: 95 SNFDCASRAEIESVLSLGVSPNRIVYANPCKQESHIKYAASVGVNLTTFDSKEELDKIRK 154 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+ ++ + + + A + G Sbjct: 155 WHSKCA----LLIRIKAPDDSGARCPLGPKYGALPDEVTPLLQAAQTAQL------NVVG 204 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 V HIGS + ++ A + + + +R ++ +++GGG D + Sbjct: 205 VSFHIGSGATRSRAYEGAIASAKSVFEAAVRLGMPGMKILNIGGGFTAGSQFDEAATTIK 264 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 +L + +I EPGRF L T +I + D ++ + M Sbjct: 265 S--ALQAYFPNEPGLTVISEPGRFFAESAFTLATNIIGKRVRGDLREYWINDGIYGSMNC 322 Query: 315 TLYDAYHEINYIVNPAGDRLHIHA--------DIVGPICETGDFIALNRKIALPRPGDLL 366 LYD + + ++ + GP C+ D + ++ + D L Sbjct: 323 ILYDHATITCTPLACNSNHANLTCKGLRAYSSTVFGPTCDALDTVLTGHQLPELQINDWL 382 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEI 391 GAY A ++N + Sbjct: 383 VFPNMGAYTAAAGSSFNGFNTAAIL 407 >gi|188581259|ref|YP_001924704.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001] gi|179344757|gb|ACB80169.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001] Length = 388 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 89/375 (23%), Positives = 150/375 (40%), Gaps = 16/375 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY F+ A DT V YA+KAN V++ LA +GS D S E+ Sbjct: 21 PVMVLDLDVVRDNYTAFARALP--DTRVFYAVKANPAPEVLRLLAEMGSCFDTASVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL-NQRAVSLGKKAPI 146 ALAA AER+ F K +I AL+ GI F V+ ++E++ + + + A + Sbjct: 79 MALAAGATAERVSFGNTIKKERDIVRALKLGIRLFAVDCQAEVEKILSATTQAGVAAADV 138 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + KFG ++ +A + GV H+GSQ Sbjct: 139 QVFCRILCDGAGAD----WPLSRKFGCEPEMAVNVLEHAHRHG-LNAYGVSFHVGSQQAN 193 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QYF 264 E++ A + ++ G + +++GGG Y S A ++F Sbjct: 194 TEAWDGALASASQIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVESYGDAIFRALTKHF 253 Query: 265 GNLQCKIILEPGRFLVADVGILVTKV--ISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 GN + I+EPGR +V + G++ +V +S K A+ + + + F Sbjct: 254 GNRIPETIIEPGRGMVGNAGMIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDESI 313 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQS 379 I + + GP C++ D + LP GD ++IE GAY + Sbjct: 314 RYAIKTDHDEDRMSPCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTTYA 373 Query: 380 GT-YNSRLLIPEIMV 393 +N + +I++ Sbjct: 374 AVAFNGFPPLEQIVI 388 >gi|154497992|ref|ZP_02036370.1| hypothetical protein BACCAP_01972 [Bacteroides capillosus ATCC 29799] gi|150272982|gb|EDN00139.1| hypothetical protein BACCAP_01972 [Bacteroides capillosus ATCC 29799] Length = 373 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 70/389 (17%), Positives = 119/389 (30%), Gaps = 23/389 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP++ + N + + + A KA S A LA SG Sbjct: 2 AELRTPYFLVDEERLVHNLEILKDVAERSGARILLAQKAFSMFACYPLLAQYLSGSTASG 61 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R P E VFS + + L + + FN + E L R Sbjct: 62 LYEARLGKE-HFPGEVHVFSPAYREDEFEALLEFADHFVFNSPRQLEKYALRARDAGKQV 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + H + G + L + Sbjct: 121 GLRVNPECSTQ---EGHAIYDPCSHGSRLGTTLANFKPEQ-----LSLLDGLHFHTLCEQ 172 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 D +E+ AF+ + ++ +++GGG I L+ + Sbjct: 173 NSDDLETTLDAFE------AKFGPYLKGLKWLNLGGGHHITRAD----YDRERLIGLVRR 222 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ LEPG +V + G LVT V+ ILD + M L Y Sbjct: 223 LKDRYNVEVYLEPGEAVVLNAGFLVTSVL-ETLHNGMDIAILDTSAACHMPDVLEMPYRP 281 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 G++ + GP C GD I + GD L E Y V++ T+ Sbjct: 282 PLQNSGQPGEKA-YTYRLGGPTCLAGDIIGDYSFDNPLQEGDTLVFEDMALYTMVKTNTF 340 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 N L + + ++R +++ Sbjct: 341 NGMPLPSIVWRDRDGNQRVVRQ-FGYEDF 368 >gi|33945618|emb|CAD91350.1| ornithine decarboxylase [Glycine max] Length = 434 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 69/379 (18%), Positives = 135/379 (35%), Gaps = 28/379 (7%) Query: 21 LAHV--VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +A + +PF + + A YA+K N N ++I LA LGS Sbjct: 51 IADKPDIDSPFSVLDLGVVMGLMDKW--ACKLPTVQPFYAVKCNPNLSLIGALAALGSSF 108 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S+ E+ L+ V +RI+++ K+ I A G+ +S E++ + Sbjct: 109 DCASKAEIESVLSLGVSPDRIIYANPCKSESHIRYAASVGVNVTTYDSLDEVEKIRNCHP 168 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + + D A T + + + A+ G+K++GV Sbjct: 169 TCEL--LLRIKPPQDSGARTSLGLKY--------GALPEEVHELLQAAHEAGLKVTGVSF 218 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 HIGS ++ A +++ + G ++ +D+GGG + + A Sbjct: 219 HIGSGGADTRAYDGAISAAKNVFEMASGLGLPRMRVLDIGGGFTSGPPFEAAALKIN--A 276 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 ++ + +I EPGR+ L T++I + D +D + + ++ Sbjct: 277 AIQASFGNEEGLVVIGEPGRYFAETAFTLATRIIGKRVRGDVREYWIDDGIYGTLNNIVF 336 Query: 318 DAYHEINYIVNPAGDRL-----------HIHADIVGPICETGDFIALNRKIALPRPGDLL 366 D + + + GP C++ D + + K+ + D L Sbjct: 337 DYATVTCMPLACTSKPENPRCSRELNLKTYPSTVFGPTCDSIDTVLRDYKLPGLQVNDWL 396 Query: 367 YIEKTGAYGAVQSGTYNSR 385 GAY +N Sbjct: 397 VFPNMGAYTTSSGTNFNGF 415 >gi|242808433|ref|XP_002485161.1| ornithine decarboxylase [Talaromyces stipitatus ATCC 10500] gi|218715786|gb|EED15208.1| ornithine decarboxylase [Talaromyces stipitatus ATCC 10500] Length = 475 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 84/396 (21%), Positives = 136/396 (34%), Gaps = 56/396 (14%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + ++ + + YA+K N + V++ +A LG+G D S+ E+ Sbjct: 78 FYVADMGEVYRQHMRWKLNLGRVKP--FYAVKCNPDPEVLRLMAQLGNGFDCASKTEIDL 135 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 AL + RI+++ KT + A Q G+ ++ EL + I Sbjct: 136 ALKTGIDPSRIIYAQPCKTRSYLRYARQKGVKQMTFDNADELYKIKNDFPDAELYLRIL- 194 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L + + GV H+GS + Sbjct: 195 ---------TDDSTSLCRLSMKFGASLDTARPLLDLAKKLE-LNVVGVSFHVGSGAEDPG 244 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + R + Q G+ + +DVGGG S Sbjct: 245 AFLKAAQDARWVFDQAAEVGYELHTLDVGGGFCDETFEKFAAILSKAV-----DDLFPPN 299 Query: 269 CKIILEPGRFLVADVG------ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 +II EPGR+ VA I V+ + S+ + L+ + ++D H Sbjct: 300 IRIIAEPGRYYVAAAFTLAANVIARRDVLDPQASSGSYMIYLNDGVYGNFSNIIFDHQHP 359 Query: 323 INYIVNPAG-------------------------------DRLHIHADIVGPICETGDFI 351 + I+ A I I GP C+ D I Sbjct: 360 VAQILTCANGSIPPTPGLTASGSSTPGSATPCSADGSPCASPAGIEYSIWGPTCDGIDVI 419 Query: 352 ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + + L GD LY E GAY + +N Sbjct: 420 SQRIVLPGLVDVGDWLYFEDMGAYTRCSATRFNGFP 455 >gi|254375090|ref|ZP_04990570.1| hypothetical protein FTDG_01279 [Francisella novicida GA99-3548] gi|151572808|gb|EDN38462.1| hypothetical protein FTDG_01279 [Francisella novicida GA99-3548] Length = 403 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 83/391 (21%), Positives = 155/391 (39%), Gaps = 9/391 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +LE + + PF+ Y +E + + + YALKAN +IK Sbjct: 9 NLESICKESEAPFFYYDLDMLEAHAKELH----RLPVKLWYALKANPLSRIIKVFDEQKI 64 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S GEL + LA V + I+ +G K+ +++ L G+ F +ES ++ K L+ Sbjct: 65 SFDVASIGELDQVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSNL 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST-LPGVKISG 195 + RV + + G FG+ I+ + A + I G Sbjct: 125 VEKKNINVKVLLRVQLVWDDQGGNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIG 184 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + I + + +++ + +++ ID+GGG+G+ Y+++ + S + Sbjct: 185 MHCFQWGNILCLNKLSQIWEITTKALLDLSEAINVSLEVIDLGGGIGVPYNAEQKSISIN 244 Query: 255 DYASLIHQYFG-NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 D ++ + LE GR+ VA+ G+ VTK++ K + ++ D +R Sbjct: 245 DLIFCFNKLKKEFPDIEYWLELGRYAVAESGVYVTKIVDRKSVNNIDLLVTDGGAQHLVR 304 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P L ++ I GP+C + D + D L ++TGA Sbjct: 305 PALTGESFP-IQLLREESCSETNDFQIHGPLCTSLDKAGIASLPKDTGLNDYLIFKQTGA 363 Query: 374 YGAVQSGT-YNSRLLIPEIMVNGSQFHIIRP 403 YG +S + L E++ Q +R Sbjct: 364 YGFTESMPLFLCHNLPAEVIFYKGQLQTVRQ 394 >gi|223993801|ref|XP_002286584.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220977899|gb|EED96225.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 484 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 97/434 (22%), Positives = 166/434 (38%), Gaps = 41/434 (9%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLT---FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 +A TP Y YS + + F NAF V YA+KA N +++K G Sbjct: 57 IATAQGTPLYAYSLSQLAAAATATLAFPNAF---GLTVRYAMKACPNGSILKYFLSRGIC 113 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D S E+RRA++ VPAE+I S D +L S+ E Sbjct: 114 IDASSGYEVRRAMSMGVPAEKISLSSQELPADFDELIGLGVKINACSVSQLERI----GK 169 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP + + +TG + G P + + I Sbjct: 170 AFPNTSQKVGIRINPGVGSGGFSSSTTGFSKTNVGGPSSSFGIWHELVTDGTVPDIVTKY 229 Query: 198 MHIGSQIDQIE---SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 +I S ++ + + I +++GGG + + + + Sbjct: 230 GLEVERIHTHIGSGSDPAIWQSVATRSLSFCKLWDTITTLNLGGGYKVGRNPGEKTTDLN 289 Query: 255 DYASLIHQYFGNLQC------KIILEPGRFLVADVGILVTKVISI------KKSADKTFV 302 + + + F + ++ +EPG +LVA+ G LVT + ++ Sbjct: 290 EIGAPVADAFRDFAKETGRELQMEIEPGTYLVANAGALVTTIQDKVSTKSASSDEGHIYL 349 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL----HIHADIVGPICETGDFIA------ 352 +D M D +RP+LY A H I + +VG CE+GD + Sbjct: 350 KMDAGMTDVLRPSLYGAIHPITILPASGKSSDIGTATESVVVVGHCCESGDLMTPKPGEP 409 Query: 353 ---LNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVN-GSQFHIIRPRMTF 407 R + GD+ ++ +GAY A S YNS PE++V+ + H+IR R + Sbjct: 410 EALEERVLRTAEIGDIAVMDGSGAYCAGMSTKNYNSFPEAPEVLVDLEGKVHLIRKRQSL 469 Query: 408 QELIELDS-IPAWL 420 Q++ E + +P+ L Sbjct: 470 QQIYENECDVPSGL 483 >gi|302820900|ref|XP_002992115.1| hypothetical protein SELMODRAFT_236454 [Selaginella moellendorffii] gi|300140041|gb|EFJ06770.1| hypothetical protein SELMODRAFT_236454 [Selaginella moellendorffii] Length = 378 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 74/365 (20%), Positives = 130/365 (35%), Gaps = 23/365 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + + + +A ++ YA+K N + ++ LA LG+G D+ S+ EL Sbjct: 18 FYVLDLATVTRLWKIWKSAMPRVNP--FYAVKCNPDPQLLSMLAALGAGFDVASKAELEA 75 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V I+F+ K I A ++G+ +SE EL L + + Sbjct: 76 VTQLGVAPRNIIFANPCKLPSHITEAAKAGVVYTTFDSEGELYKLKKYHPQAE----VLL 131 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R D + K+G + + L A TL K++GV H+GS + Sbjct: 132 RFRSD------DTGARCPLGVKYGAEWDECYHLLEVAKTLGI-KVAGVAFHVGSGASDVN 184 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG--- 265 +F + K R L S G + GG ++ +++ Y Sbjct: 185 AFAEGIKAARKLFDMAESLGLPRMTMLDIGGGFVSDGGAGVKFAAAAYEIGNALEEHFPL 244 Query: 266 --NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +II EPGRF + L V + + + Y + Sbjct: 245 ETMADVRIIGEPGRFFAEEAFSLAALVFGCRVRRRE-----EGNKTVVEYWINDGIYGSM 299 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 N ++ + I GP C+ D + + + + GD L + GAY ++N Sbjct: 300 NCLLYDHATLSLHPSIIFGPTCDGLDTVLSDVWLPRLQCGDWLVFPRMGAYTKSAGSSFN 359 Query: 384 SRLLI 388 + Sbjct: 360 GFAVP 364 >gi|262199658|ref|YP_003270867.1| carboxynorspermidine decarboxylase [Haliangium ochraceum DSM 14365] gi|262083005|gb|ACY18974.1| carboxynorspermidine decarboxylase [Haliangium ochraceum DSM 14365] Length = 399 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 68/397 (17%), Positives = 129/397 (32%), Gaps = 17/397 (4%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 V + + ++TP Y + KN ++A + + ALK + +V + Sbjct: 11 VDVSAILDRLETPVYLCDLGRLRKNLEILADAQRRAECKILLALKGFAMWSVFPIVREYL 70 Query: 76 SGLDIVSEGE--LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 SG+ S E L R V + D L S ++ + Sbjct: 71 SGVATSSVAEARLGREEFCGDSDRFEVHAYAPAYTDADIDELVELSDHIVFNSVAQWQRH 130 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 R + G+ A R+NP + + GI + A ++ Sbjct: 131 GPRVRAAGRDIECALRLNPRHSEVEVALYDPCASFSRLGITPENFPAPGA-------PEL 183 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G+ + ++ S + + + ++ + ++ ++ GGG I Sbjct: 184 DGISGLHFHTLCELGSDA-LERTVAAVEERFGEHLGKVRWVNFGGGHHITRPD----YDI 238 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 ++ + + LEPG + + G+LV V+ + D ILD + M Sbjct: 239 ERLVRVVRGFQDRHGVAVYLEPGEAIALNTGVLVASVLDVGH-NDMNLAILDTSATAHMP 297 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 L Y + G+ H + G C GD I + GD L Sbjct: 298 DVLEMPYRPVITGAGAPGELAH-TYRLGGLTCLAGDVIGDYSFAEPLQVGDKLVFGDMAH 356 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L +Q + R +++ Sbjct: 357 YTMVKNTTFNGVRLPDIATYEPDTQAVEVVRRFGYED 393 >gi|1706324|sp|P49725|DCOR_PANRE RecName: Full=Ornithine decarboxylase; Short=ODC gi|758642|emb|CAA57683.1| ornithine decarboxylase [Panagrellus redivivus] gi|1200128|emb|CAA65024.1| ornithine decarboxylase [Panagrellus redivivus] Length = 435 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 75/399 (18%), Positives = 138/399 (34%), Gaps = 33/399 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF + + I + + + CYA+K N ++ +++TLA LG G D S+ E+ Sbjct: 46 PFVVMNVSTIMAKVIQWQRTMPRVAP--CYAVKCNDDKVLLRTLADLGMGFDCASKAEIE 103 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + + E+IV++ KT I A +G+ +S EL + Q I+ Sbjct: 104 KVIGLVG-PEKIVYANPCKTRGFIAHAEAAGVKRMTFDSVEELTKIKQNHADPSLILRIS 162 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + + KFG + + G+ + G+ H+GS ++ Sbjct: 163 VS----------DPTAQCQLGIKFGCDPETVAPKLLRKAADMGMNVIGISFHVGSGCNEP 212 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI----HQY 263 +F A + R L S G ++ +D+GGG + + + + Sbjct: 213 ATFRTALEYARGLFDLGISLGLSMTLLDIGGGFPGVDTAHISLDACAAVINPALEELFPL 272 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVI--------------SIKKSADKTFVILDVAMN 309 ++I EPGR+ + T VI + + D Sbjct: 273 DSCPDVEVIAEPGRYFACAAVSVTTNVIASVKVPASRITEKADDVNRDGYMYYMNDGVYG 332 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 F + D + GP C+ D + + + GD LY Sbjct: 333 SFNCKLFDHYQPRGMPLAEHDADEPRFPVCVWGPTCDGLDQVEESSVMPRLYEGDWLYYP 392 Query: 370 KTGAYGAVQSGTYNSRLLIPE-IMVNGSQF-HIIRPRMT 406 GAY +V + T+N ++ + I+R + Sbjct: 393 DMGAYTSVAASTFNGFDKPKTYYFIDEATLGSIVRKADS 431 >gi|146281380|ref|YP_001171533.1| ornithine decarboxylase [Pseudomonas stutzeri A1501] gi|145569585|gb|ABP78691.1| probable ornithine decarboxylase [Pseudomonas stutzeri A1501] gi|327479557|gb|AEA82867.1| ornithine decarboxylase [Pseudomonas stutzeri DSM 4166] Length = 387 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 144/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I K Y F+ V YA+KAN +I L GS DI Sbjct: 21 ADQHETPFVVIDTETISKAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLRDKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + ++ V ERI + K +I + G+ F +S E N + G Sbjct: 79 SIYELDKVMSRGVGPERISYGNTIKKSRDIRYFFEKGVRMFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L ++ G+ H+G Sbjct: 137 AKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARQLG-LEPYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIELKMINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYVDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD LY TGAY Sbjct: 309 MDESIKFPIYTEKKGEVEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|298293889|ref|YP_003695828.1| Orn/DAP/Arg decarboxylase 2 [Starkeya novella DSM 506] gi|296930400|gb|ADH91209.1| Orn/DAP/Arg decarboxylase 2 [Starkeya novella DSM 506] Length = 376 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 91/365 (24%), Positives = 147/365 (40%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY F+ A DT V YA+KAN + A++ LA LGS D S E+ Sbjct: 17 PCVVVDLDVVRSNYAAFARALP--DTRVFYAVKANPDPAILSALAELGSCFDCASVNEIL 74 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +RI F K ++ A + G+ F V+ E+E++ + + A I Sbjct: 75 MALAAGATPDRISFGNTIKKERDVARAFELGVRLFAVDCEAEVEKIARVAAGAKVFCRIL 134 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 A KFG + +A L ++ GV H+GSQ + Sbjct: 135 CD-----GAGA-----EWPLSRKFGCVPEMAVDVLEHAHRLG-LEAYGVSFHVGSQQKNV 183 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QYFG 265 E++ A + ++ G ++ +++GGG Y D + A ++FG Sbjct: 184 EAWDSALASASQIFRECMERGFSLSLVNLGGGFPAKYLQDVPAAEAYGEAIFRALSRHFG 243 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKS-ADKTFVILDVAMNDFMRPTLYDAYHEIN 324 N + I+EPGR +V G++ +V+ I K AD + + + F Sbjct: 244 NAIPQTIIEPGRGMVGAAGLIEAEVVLISKKAADDDMRWVYLDIGKFGGLAETMEEAIRY 303 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 +V P + GP C++ D + + + GD + IE TGAY S Sbjct: 304 PLVTPHDGDAMEPCVLAGPTCDSADVMYEKTPVMLPVSLAIGDKVLIEATGAYTTTYSAV 363 Query: 382 -YNSR 385 +N Sbjct: 364 AFNGF 368 >gi|134100867|ref|YP_001106528.1| ornithine decarboxylase [Saccharopolyspora erythraea NRRL 2338] gi|291003519|ref|ZP_06561492.1| ornithine decarboxylase [Saccharopolyspora erythraea NRRL 2338] gi|133913490|emb|CAM03603.1| ornithine decarboxylase [Saccharopolyspora erythraea NRRL 2338] Length = 407 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 87/373 (23%), Positives = 140/373 (37%), Gaps = 20/373 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP I Y F +V YA+KAN V+ LA LG+ D+ S E Sbjct: 32 PTPCLVVDLPTIAHRYRRLRGLFPR--AVVHYAVKANPAPEVVSLLAGLGASFDVASPAE 89 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L A +R+ + K ++ G+ F V+SE +L ++ A Sbjct: 90 AELCLRAGAAPDRLSYGNTVKKASDVARVHGLGVRMFTVDSEPDLVNVSAEAPGADVLCR 149 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + ++ KFG SL A L ++ GV H+G+Q Sbjct: 150 VF----------AEPPGASTPFGRKFGCEPELAESLLRRAGRLG-LRPRGVSFHVGTQQL 198 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS--LIHQY 263 ++ L +L +G + +D+GGG AY PPS A + +Y Sbjct: 199 DPRAWEHGIATAARLMDRLADSGVRLTTLDLGGGFPAAYRDGAPPPSEYAAAIEEYLDRY 258 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 FG + +++LEPGR +VAD G+L ++V+ + + A + I Sbjct: 259 FGAARPEVVLEPGRAVVADAGVLRSEVVLVSRKAYEHRHRWVYLDVGRHNGLTETEDEFI 318 Query: 324 NYIVNPAGD-RLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKTGAYGAVQS 379 Y + D + GP C+ D + + L GD + + GAY A + Sbjct: 319 TYALATPHDGGPTGPVVLAGPTCDGDDVLYERNTYHLPLDLHAGDHVDVLAAGAYTASCA 378 Query: 380 GT-YNSRLLIPEI 391 +N +P I Sbjct: 379 TVGFNGFPPLPTI 391 >gi|268558706|ref|XP_002637344.1| C. briggsae CBR-ODC-1 protein [Caenorhabditis briggsae] gi|187024308|emb|CAP36352.1| CBR-ODC-1 protein [Caenorhabditis briggsae AF16] Length = 423 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 74/374 (19%), Positives = 136/374 (36%), Gaps = 26/374 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F I + + + ++ YA+K N++ +I+ LA LG G D S E+ Sbjct: 42 FMLVDLDKIIERFNLWKRELPMIEP--FYAVKCNTDVVLIRVLASLGCGFDCASREEIDI 99 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V A+R++++ KT I AL+ + ++ EL + + + IA Sbjct: 100 VMETGVSADRLIYANPCKTRSFIVHALERDVRMMTFDNAEELIKIGKLHPNAEMILRIAV 159 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +T KFG + GV + G+ H+GS + Sbjct: 160 S----------DPTATCPLNLKFGADPVLAAPQLLKLAHEEGVNVVGISFHVGSGCNDAT 209 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-SDYASLIHQYFGNL 267 ++ A ++L + G + ID+GGG A H+ + + ++F Sbjct: 210 AYRTALSHAKNLCEIGEGYGFKMDIIDMGGGFPGAEHAHNPFEKIAETIRDALDEFFPET 269 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSA-------------DKTFVILDVAMNDFMRP 314 ++I EPGRF A+ LV +I + ++ + Sbjct: 270 DKRLIAEPGRFFAAEPFSLVANIIHATEVPASKITKDPKDSAEHGYMYYINEGVYGSFNC 329 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 L+D H I + + I GP C++ D + + + G+ +Y GAY Sbjct: 330 ILFDHAHPIGGPLFDVDRNEKYMSTIWGPTCDSLDLVEDKKLMVKMEIGEWMYYPDMGAY 389 Query: 375 GAVQSGTYNSRLLI 388 + T+N Sbjct: 390 TLAAATTFNGFAKP 403 >gi|295104725|emb|CBL02269.1| carboxynorspermidine decarboxylase [Faecalibacterium prausnitzii SL3/3] Length = 403 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 73/404 (18%), Positives = 127/404 (31%), Gaps = 21/404 (5%) Query: 4 FKYFEGSLHAENVSLEKLAH----VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 + + L L+ + TP Y + +N + A Sbjct: 1 MRVRDSRPPFAG--LANLSEAQLHRLPTPCYLLDEAQLRRNGEILLGVQQRTGCRILLAQ 58 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN V LA +G + E R E VF +T + +L + Sbjct: 59 KAFSNFNVYPVLAPYLAGTEASGLYESRLGREELPEKENHVFCAAYRTDEFEELLQYADH 118 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 FN S+ +A I + H+ + G Q Sbjct: 119 IVFNSPSQLAKFGPAAKAAGKSIGLRINPECSTQ---EGHEIYDPCAPGSRLGTTRAQWD 175 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + A LP + + Q + A + ++ ++ ++ GGG Sbjct: 176 AAVAAHPELPALLDGLHFHTLCEQDADALAVTLAA-----VEKKFADLLPRMKWLNFGGG 230 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 I + + + I ++ LEPG + G LVT V+ ++ D Sbjct: 231 HHITRPG----YALATLENCILSVRQKYGVQVYLEPGEAWALNAGYLVTTVLDTLRNGDT 286 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + ILD++ + Y AG++ H + GP C GD I A Sbjct: 287 SLAILDMSAACHTPDVIEMPYRPPLLDAGEAGEKAH-TVRLGGPTCLAGDIIGDYSFDAP 345 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV--NGSQFHII 401 GD L Y ++ T+N L P ++ +G+ ++ Sbjct: 346 LAEGDKLIFGDMAIYTTCKNNTFNGMPLPPIWLLGADGNCRELV 389 >gi|170099485|ref|XP_001880961.1| ornithine decarboxylase [Laccaria bicolor S238N-H82] gi|164644486|gb|EDR08736.1| ornithine decarboxylase [Laccaria bicolor S238N-H82] Length = 412 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 76/391 (19%), Positives = 131/391 (33%), Gaps = 39/391 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + + YA+K N + +I+ LA LG+G D S GE+ + Sbjct: 18 FFVADLSLVYYQHQRWKACLPEI--QPFYAVKCNPDPYIIRLLAALGTGFDCASNGEISQ 75 Query: 89 ALAA-PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L + RI+F+ K + + A + + ++ EL + + I Sbjct: 76 VLNVGGIDPSRIIFANPCKAVSFVRNAAKMRVDMMTFDNSDELYKIARAHPRAKVIVRIL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S KFG P+ + L A A L + + GV H+GS Sbjct: 136 ----------TDDSKSLCAFGIKFGAPLVTVPGLLAKAKEL-NLDVIGVSFHVGSGCYDP 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + A R + + G+ +DVGGG + + Sbjct: 185 SVYTDAIMRARAVFDMGKDAGYTFSLLDVGGGFEDTLFEQAAHYLNKAI---EQYFPDRR 241 Query: 268 QCKIILEPGRFLVADVGILVTKVISIK---------------------KSADKTFVILDV 306 KII EPGRF V+ L +I+ + V Sbjct: 242 NIKIIAEPGRFYVSKAFRLAANIIARRAPIAGPPAQGPSESASDQPAVMYYINDGVYGAF 301 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDL 365 F ++ +N + A + + GP C++ D ++ + + GD Sbjct: 302 NCILFDHQVIHPHVLSMNGSFHIADSEPSHLSSVWGPTCDSIDCVSPKTTLPVALQVGDW 361 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS 396 L + GAY + +N L I G Sbjct: 362 LGFDNMGAYTVCAASQFNGFELSNVIYTTGG 392 >gi|170751044|ref|YP_001757304.1| ornithine decarboxylase [Methylobacterium radiotolerans JCM 2831] gi|170657566|gb|ACB26621.1| Ornithine decarboxylase [Methylobacterium radiotolerans JCM 2831] Length = 388 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 86/377 (22%), Positives = 147/377 (38%), Gaps = 20/377 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY F+ + DT V YA+KAN V++ LA +GS D S E+ Sbjct: 21 PVMVLDLDVVRDNYTAFARSLP--DTRVFYAVKANPAPEVLRLLAEMGSCFDTASVAEME 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK---TLNQRAVSLGKKA 144 LAA A+RI F K I AL+ GI F V+ ++E++ + + Sbjct: 79 MVLAAGATADRISFGNTIKKERCIGRALKLGIRLFAVDCQAEVEKIARAAEAVDVPAGEI 138 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R+ D + KFG + +A ++ G+ H+GSQ Sbjct: 139 RVFCRILCD------GVGADWPLSRKFGCVPEMAADVLEHAHRQG-LEAYGISFHVGSQQ 191 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQ 262 E++ A + ++ G + +++GGG Y S + + Sbjct: 192 GNTEAWDGALGSAAAVFRECAERGIGLSMVNLGGGFPTKYLKAVPGVESYGEAIFRGLTK 251 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKV--ISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 +FGN + I+EPGR +V + G++ +V +S K + + + + F Sbjct: 252 HFGNQIPETIIEPGRGMVGNAGLIEAEVVLVSRKSADADEVRWVYLDIGKFGGLAETMDE 311 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAV 377 I I GP C++ D + + LP GD + IE GAY Sbjct: 312 AIRYPIRTARDGDATEPCVIAGPTCDSVDVLYERQLYPLPVSLSIGDKVLIEGAGAYTTT 371 Query: 378 QSGT-YNSRLLIPEIMV 393 + +N + +I++ Sbjct: 372 YAAVAFNGFPPLQQIVI 388 >gi|208780155|ref|ZP_03247498.1| pyridoxal-dependent decarboxylase, C- sheet domain protein [Francisella novicida FTG] gi|208744159|gb|EDZ90460.1| pyridoxal-dependent decarboxylase, C- sheet domain protein [Francisella novicida FTG] Length = 403 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 84/391 (21%), Positives = 155/391 (39%), Gaps = 9/391 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +LE + + PF+ Y +E + + + YALKAN +IK Sbjct: 9 NLESICKESEAPFFYYDLDMLEAHAKELH----RLPVKLWYALKANPLSRIIKVFDEQKI 64 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S GEL + LA V + I+ +G K+ +++ L G+ F +ES ++ K L+ Sbjct: 65 SFDVASIGELDQVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSNL 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST-LPGVKISG 195 + RV N + + G FG+ I+ + A + I G Sbjct: 125 VEKKNINVKVLLRVQLVWNDQENNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIG 184 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + I + + +++ + +++ ID+GGG+G+ Y++ + S + Sbjct: 185 MHCFQWGNILCLNKLSQIWEITTKALLDLSEAINVSLKVIDLGGGIGVPYNAGQKSISIN 244 Query: 255 DYASLIHQYFG-NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 D ++ + LE GR+ VA+ G+ VTK++ K + ++ D +R Sbjct: 245 DLIFCFNKLKKEFPDIEYWLELGRYAVAESGVYVTKIVDRKSVNNIDLLVTDGGAQHLVR 304 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P L ++ I GP+C + D + D L ++TGA Sbjct: 305 PALTGESFP-IQLLREEACGETNDFQIHGPLCTSLDKAGIASLPKDIGLNDYLIFKQTGA 363 Query: 374 YGAVQSGT-YNSRLLIPEIMVNGSQFHIIRP 403 YG +S + L E++ Q +R Sbjct: 364 YGFTESMPLFLCHNLPAEVIFYKGQLQTVRQ 394 >gi|163840434|ref|YP_001624839.1| diaminopimelate decarboxylase [Renibacterium salmoninarum ATCC 33209] gi|162953910|gb|ABY23425.1| diaminopimelate decarboxylase [Renibacterium salmoninarum ATCC 33209] Length = 419 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 91/392 (23%), Positives = 161/392 (41%), Gaps = 20/392 (5%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD-----GMDTMVCYALKANSNQAVIKTLAH 73 LA + P Y Y + + + A G + YA+KAN + V++T A Sbjct: 24 RNLAQQNRLPAYVYDLAHLRSHLVAIKAALSHPASGGSGVEILYAVKANPDAEVVRTAAE 83 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 + GL++ S GE+ + A +P R++F G GKT E+ AL +G++ F+VES EL+ L Sbjct: 84 ILDGLEVSSGGEI-THVRALLPDARLIFGGPGKTDAELSTALAAGVHRFHVESVDELRRL 142 Query: 134 N----QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 N + ++ + + ++ ++ G FG+ + A T+P Sbjct: 143 NALAAEAGITAEILFRVNIQAGITSGNSSTAALTMGGVPSPFGMDPEEAALAAAQLETMP 202 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + GV H+ S +D +A + R +G + ++VGGG+ + Y Sbjct: 203 NITLHGVHAHLASGVDSATGAAEAEDIARWARSFAAEHGLELSELNVGGGMSVDYLRTAE 262 Query: 250 PPSSSDYASLIHQ-YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P SDY S ++ + +EPGR + A G +++V +K+S K F + Sbjct: 263 PFDWSDYGSRLNSLAEKYPEFTFQIEPGRAISAYSGWYLSRVQELKRSHGKWFAVCSGGT 322 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIH-------ADIVGPICETGDFIALNRKIALPR 361 + P ++ + DR VG +C D +A + ++ Sbjct: 323 HHLRTPAAKGHSQPLSVLQVAEWDRPWERASLQENSVSFVGQLCTPKDLLARDVPVSQIS 382 Query: 362 PGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIM 392 GD + GAY S + EI+ Sbjct: 383 AGDTVIFGLAGAYALNISHRDFLMHPQP-EIL 413 >gi|114778271|ref|ZP_01453130.1| probable ornithine decarboxylase [Mariprofundus ferrooxydans PV-1] gi|114551373|gb|EAU53929.1| probable ornithine decarboxylase [Mariprofundus ferrooxydans PV-1] Length = 414 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 89/378 (23%), Positives = 145/378 (38%), Gaps = 19/378 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ A +TPF I ++Y + F + YA+KAN + ++ L G+ Sbjct: 42 DIKTFADSRETPFVVLDRRIINEHYSELVDNFPY--AKIYYAIKANPDVEILSLLRDRGA 99 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S EL + L V +R + K +I GI F ++ E N Sbjct: 100 CFDVASTYELDKVLGLGVSPDRCSYGNTIKKCKDIRYFYAKGIRLFASDA--EADLRNIA 157 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + G K I A KFG +L A L ++ GV Sbjct: 158 REAPGAKVYIRLLTEGSHTA-------DWPLSRKFGCQTDMATNLLILAKELG-LEPYGV 209 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS- 254 H+GSQ I ++ A ++ + L++ ++ I++GGG Y + + Sbjct: 210 SFHVGSQQRDIGAWDAAIDKVKAIFDWLKTECDIQLKMINMGGGFPANYLTRTNDLPTYA 269 Query: 255 -DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + +H FG+ +IILEPGR L A+ G+LV++V+ I + + Sbjct: 270 KEITHYLHDDFGDDMPEIILEPGRSLCANAGVLVSEVVLISRKTTTSLHRWVYTDVGMFS 329 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEK 370 + I Y + + I GP C++ D + + K LP GD LY Sbjct: 330 GLIETLGEAIKYPIYTDRSGEREESVIAGPSCDSADIMYEDHKYGLPNSLEIGDRLYWFS 389 Query: 371 TGAYGAVQSG-TYNSRLL 387 TGAY S +N Sbjct: 390 TGAYTTSYSAIEFNGFPP 407 >gi|189424736|ref|YP_001951913.1| carboxynorspermidine decarboxylase [Geobacter lovleyi SZ] gi|189420995|gb|ACD95393.1| carboxynorspermidine decarboxylase [Geobacter lovleyi SZ] Length = 384 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 62/374 (16%), Positives = 119/374 (31%), Gaps = 20/374 (5%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + EK+A + +P Y + N + ALKA S + ++ Sbjct: 3 GIDCEKIAQLAPSPAYVVDLGRLRHNLAILDQVQQRSGARILMALKAFSMWSTFPLISKT 62 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+ S E R E F+ K D ++L S FN ++ E Sbjct: 63 LHGVCASSPWEARLGREEFGR-EVHSFAAAFKESDVVELLSISNHLVFNSFNQLERFRP- 120 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + I RVNP+ + + GIP+ + + G+ Sbjct: 121 -LWEKEQGRVSIGLRVNPEHSEGHTAIYDPCAPTSRLGIPV--AEFEGRSLAGVEGLHFH 177 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + + R ++ ++ +++GGG +H Sbjct: 178 TLCEQLF---------EPLERTARAFEEKFGRYLQGMKWLNLGGG----HHITREGYDID 224 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 L+ + ++ LEPG + G+LV++V+ + ++ + + P Sbjct: 225 GLVELVTYFKNKYGVEVYLEPGEAIAIGTGLLVSEVLDVVH--NQMDIAILDVSATCHMP 282 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + + + GP C GD I + GD L E Y Sbjct: 283 DILEMPYRPDITGGFKAGEKPYTYRLGGPSCLAGDVIGDWSFDQPLKAGDRLVFEDMAHY 342 Query: 375 GAVQSGTYNSRLLI 388 V++ T+N Sbjct: 343 TMVKTTTFNGIHHP 356 >gi|269129052|ref|YP_003302422.1| Orn/DAP/Arg decarboxylase 2 [Thermomonospora curvata DSM 43183] gi|268314010|gb|ACZ00385.1| Orn/DAP/Arg decarboxylase 2 [Thermomonospora curvata DSM 43183] Length = 373 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 80/374 (21%), Positives = 145/374 (38%), Gaps = 16/374 (4%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+LA P + Y A+ ++ A G + YA KAN + ++KT+A G+ Sbjct: 5 EELAGSGGLPAFVYDLGALREHVAAIRKALTG-GPELFYAAKANPDAEILKTVAPYVDGI 63 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 ++ S GEL+ A +P R+ F G GKT +E+ LA++ +VES EL L + Sbjct: 64 EVASGGELKHVR-AVLPKARLAFGGPGKTDEELALAVRE-AERVHVESPHELSRLARIGR 121 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + +K FG+ I + + + P V++ G+ Sbjct: 122 DVDVLLRVNL--------AGERKGVALAMSGPFGMDPEAIEACHEILAGAPWVRLRGIHA 173 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 H+ S ++ ++ ++L+ ++ ++GGG+ + Y HR + Y Sbjct: 174 HLASGLEAEALVRQSEEILQWARPWLEKTGCTQNPEFNLGGGMAVDYTDPHRRFDWTTYG 233 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 I + I EPGR + G VT+V+ +KK+ + + +L + P Sbjct: 234 RQIAALAQPGEILRI-EPGRAVTVYAGWYVTQVLDVKKAHGQWYAVLRGGTHHIRTPVTK 292 Query: 318 DAYHEINYIVNPAGDRLH--IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + + +VG +C D A + GD++ GAY Sbjct: 293 NHNQPFTVLPRGEQGPAVNGAEVTLVGQLCTPKDVFARQVPVDRIAVGDVVAFSMAGAYA 352 Query: 376 AVQSGT-YNSRLLI 388 S + Sbjct: 353 WNISHHDFLMHPKP 366 >gi|284049214|ref|YP_003399553.1| Orn/DAP/Arg decarboxylase 2 [Acidaminococcus fermentans DSM 20731] gi|283953435|gb|ADB48238.1| Orn/DAP/Arg decarboxylase 2 [Acidaminococcus fermentans DSM 20731] Length = 404 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 63/388 (16%), Positives = 117/388 (30%), Gaps = 17/388 (4%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + TP Y A+ +N D + A KA SN + L +G + Sbjct: 27 RLGTPCYILDKAALRRNGEILKGVQDRTGCRILLAQKAFSNYDLYPVLEPYLAGTEASGL 86 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E + A E VF G + ++ + FN + + + Sbjct: 87 YEAKLGREAMPGKEVHVFCGAYRADQMEEVCQVADHIVFNSPRQLKTYGPMAKKAGKSVG 146 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 I + H + G Q + + + I Sbjct: 147 LRINPECSTQ---EGHAIYDPCAPGSRMGTTRAQWDAWM-------TPDLVELLDGIHFH 196 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + K L + ++ ++ +++GGG I H P I + Sbjct: 197 TLCEQDADDLKKTLDAVEEKFGDVLPKMKWVNMGGGHHITRPGYHIPL----LEECIRRA 252 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + LEPG + G L T+V+ + ++ D ILD + M L Y Sbjct: 253 QKAWDVTVYLEPGEACALNAGYLATRVLDVVENGDVKIAILDTSAACHMPDVLEMPYRPP 312 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 Y G+R + + C +GD GD+L Y ++ T+N Sbjct: 313 LYGAGEPGERA-VTWRLGSGTCLSGDVAGDYSFDGDLEVGDMLLFGDMAIYTTCKNNTFN 371 Query: 384 SRLLIPE-IMVNGSQFHIIRPRMTFQEL 410 L ++ +++ +++ Sbjct: 372 GMPLPDIDVLEEDGSVKVLKK-FGYEDF 398 >gi|226357231|ref|YP_002786971.1| diaminopimelate decarboxylase [Deinococcus deserti VCD115] gi|226319221|gb|ACO47217.1| putative diaminopimelate decarboxylase (DAP decarboxylase) (Meso-2,6-diaminoheptanedioate carboxy-lyase) [Deinococcus deserti VCD115] Length = 409 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 90/380 (23%), Positives = 151/380 (39%), Gaps = 14/380 (3%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y A++++ + YA+KAN +++TLA G ++ S GEL + Sbjct: 18 AYVYDLAALDEHAAWLRATLPAA-CELFYAVKANPEPRILETLAPHVDGFEVASGGELAQ 76 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A P ++F G GKT E+ AL++G +VES SEL+ L A S G+ A + Sbjct: 77 VS-ARFPQVPVIFGGPGKTDSELAQALEAGAEVLHVESRSELERLAWTARSRGRVAAVLL 135 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 RVN + ++ G + FGI +I A+ P +++ G H+ S Sbjct: 136 RVNLRVGDLPDTPLTMGGRPTPFGIDAAEIPGCLAWLEQHPELQLRGFHFHLLSHQLDAR 195 Query: 209 SFHKAFKLL-RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS-LIHQYFGN 266 + + + G ++VGGG+G+ Y + + S + + + Sbjct: 196 AHLRLLAAYAEQVRAWQSRYGLTTDLLNVGGGIGVNYRNPAQSFDWSTFCTGMQALTATL 255 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + LE GRF+ A G +VI +K + + FV+ + F P H + Sbjct: 256 PGVRWRLELGRFVTAGCGYYAMQVIDLKHNLGEAFVVARGGTHQFRTPAAQGHNHPFEVL 315 Query: 327 VNPAGDRLHIH-------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + + +VG +C D +A + R GDLL GAY S Sbjct: 316 AVDSWPHAYSRVELAGGLVTVVGQLCTPKDVLARRVPVGRVRAGDLLLFSLAGAYAWNIS 375 Query: 380 G-TYNSRLLIPEIM--VNGS 396 + S + V+ Sbjct: 376 HQQFLSHPAPQMVFLAVDQG 395 >gi|254469619|ref|ZP_05083024.1| carboxynorspermidine decarboxylase [Pseudovibrio sp. JE062] gi|211961454|gb|EEA96649.1| carboxynorspermidine decarboxylase [Pseudovibrio sp. JE062] Length = 391 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 68/392 (17%), Positives = 125/392 (31%), Gaps = 26/392 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P + A+ +N + D V ALKA S A+ + G Sbjct: 22 RVPSPCFVVDEVAVRRNLSMLKDVADRSGAHVLAALKAFSMFALAPVVREYLEGTCASGL 81 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R E F K + ++ + FN ++ + N + Sbjct: 82 YEARLGRE-KYGGEVATFCAGYKASEIDEIIGYTDHMIFNSPAQKDRFLPN--VRAAKHN 138 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + RVNP+ + +K + G P+ Q+ ++ I Sbjct: 139 VDVGLRVNPEHSEGEVEKYDPCAPCSRLGFPVSQL-----------SAEVLTGVDGIHMH 187 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + F + + +L ++ I+ GGG +H + I Sbjct: 188 TLCEQEFEPLQRTWNAVKDKLAPYFGQLKWINFGGG----HHITREDYDREALIAFIKDV 243 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG + D GIL+ +V+ + K+ +D+A+ D E Sbjct: 244 RAETGLEVYLEPGEAVALDAGILIGEVLDLPKNG------MDLAIVDISATCHMPDVIEA 297 Query: 324 NYIVNPAGDRLH-IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 Y + + GP C GD I + + GD Y V++ T+ Sbjct: 298 PYRPAMLDESEEGHTYRLGGPSCLAGDVIGDYTRAEPLQIGDRFAFLDQAHYSMVKTNTF 357 Query: 383 NSRLLIPEIMVNGSQFHI-IRPRMTFQELIEL 413 N L + N + I ++ + + Sbjct: 358 NGVPLPTIALWNSESDELKIIREFSYNDFLNR 389 >gi|291544655|emb|CBL17764.1| carboxynorspermidine decarboxylase [Ruminococcus sp. 18P13] Length = 383 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 61/382 (15%), Positives = 113/382 (29%), Gaps = 21/382 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y + +N + A KA S + +G Sbjct: 12 AAVPTPCYIVDEARLRRNLELLQMVQQRSGAKILLAQKAFSMYRTYPMIRKYLAGSTASG 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + E ++S K + ++ S S ++ K + + + Sbjct: 72 LYEAKLARE-EMGGEVHIYSPAYKPEEFDEILRISDH--IVFNSCAQWKRYRDQVQACSR 128 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 K R+NP+ + + G + + + Sbjct: 129 KISCGLRINPEYAETETDLYNPCFTGSRLGTTLANLEEDALEGLD-----------GLHF 177 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ + LR + ++ +Q ++ GGG I L Sbjct: 178 HTMCEQNSDTLERTLRVVEEKFGKYLSRMQWVNFGGGHHITRPDYDVEL----LIRLCQD 233 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LVT+V+ I+D + M L Y Sbjct: 234 FAEKYHVQVYLEPGEAVALHAGYLVTQVLDFVH-NGLDIAIVDASAACHMPDVLEMPYRP 292 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 G+ + P C GD I A + GD L Y V++ T+ Sbjct: 293 EILGAGQPGELA-YTYRLGAPTCLAGDVIGDYSFAAPLQIGDRLVFCDMAIYSMVKNNTF 351 Query: 383 NSRLLIPEIMVN-GSQFHIIRP 403 N L ++ + + +R Sbjct: 352 NGMPLPAILLAHADGRVETVRQ 373 >gi|76818637|ref|YP_337010.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710b] gi|76583110|gb|ABA52584.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710b] Length = 462 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 89/400 (22%), Positives = 147/400 (36%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y +LH + +LA P + Y N A D + YA+K Sbjct: 69 LHYRGNALHFCGRDVAELAAAFAEPVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMK 128 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 129 ANRFRPLLSELRRSPLFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPG 188 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 189 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGAAVTKFGIYAE 244 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ ++F+ + D + ++ I++GGG Sbjct: 245 QFGAALELAARHGLAVTWLHCHAGCGYLDAQLESFERVLDALDAFAARVPGLRGINLGGG 304 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG I +EPG F+ D G+LV +V ++ ++ Sbjct: 305 LGLPHRATDRPLDLERWRAAVHARFGGRPLAIAIEPGDFIAKDAGMLVLRVAYVELKRNR 364 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V G + G I E D + + Sbjct: 365 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPA--QSVCVAGNINEALDVWGNDVSLPP 422 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 423 VEPGDFIALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 462 >gi|52548994|gb|AAU82843.1| diaminopimelate decarboxylase [uncultured archaeon GZfos1D1] Length = 128 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 1/122 (0%) Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + FV +D +N +RP +YDAYHE + N A DIVGPICE+GD IA +RK+ Sbjct: 6 RNFVGVDAGLNLLIRPAMYDAYHE-VAVANKADSAGAETYDIVGPICESGDIIARDRKLP 64 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPA 418 L PGD++ + GAYG S YN R EIMV+G +IR + + +LI IPA Sbjct: 65 LIEPGDVIAVFDVGAYGFSMSSQYNGRCRCTEIMVSGGAVDVIREQEHYGDLIAKQKIPA 124 Query: 419 WL 420 L Sbjct: 125 RL 126 >gi|66819325|ref|XP_643322.1| group IV decarboxylase [Dictyostelium discoideum AX4] gi|60471373|gb|EAL69333.1| group IV decarboxylase [Dictyostelium discoideum AX4] Length = 431 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 89/395 (22%), Positives = 146/395 (36%), Gaps = 18/395 (4%) Query: 30 YC--YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 Y Y+ + G+ TM A+K N +++K G G ++ S GELR Sbjct: 34 YVMLYNLDEFRALAKEACDNLKGLQTM---AVKCNPVMSLMKEAIKAGLGAEVASFGELR 90 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSG---IYCFNVESESELKTLNQRAVSLGKKA 144 A A +I+F KT E++ AL G E E+ +++ + + Sbjct: 91 IAEIAGFEPSKIIFDSPIKTKKELEYALNLGVVINIDNFEELETIESIVSKFSKEKYESL 150 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + RVNP + A +STG KFGI I + +K + + Sbjct: 151 SLGIRVNPQVGAGKLTDLSTGVPTSKFGIGIEHKDKIIDAYVRNKFLKGVHIHVGSQGFE 210 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S + R + I ++GGGL + + S+ P+ + YA+ + Q Sbjct: 211 ISNISESAVKVMNLVKEINARDDTKSQITFFNMGGGLSVNFESEETSPTFTQYANHMKQL 270 Query: 264 F---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 N + +I E GR A G++V+ V K S D+ I N ++R Sbjct: 271 LPELFNGEFLLITEFGRSYWAKCGVVVSTVEYTKSSGDREIAICHAGANMYIRTVYQFPL 330 Query: 321 HEINYIVNPAGDR----LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 I + + DI GP C D + R + + D + +GAY Sbjct: 331 WRIRVTIFDSNGEYKTGNEKITDIAGPCCFAADVLVKERLLPPIKKDDFIMAHDSGAYML 390 Query: 377 VQSGTYNSRLLIPEIMVN--GSQFHIIRPRMTFQE 409 YN RL P N + +I+ T ++ Sbjct: 391 SSYSHYNLRLAPPIFSFNTTNNTIELIKKGETIED 425 >gi|326574369|gb|EGE24312.1| ornithine decarboxylase [Moraxella catarrhalis CO72] Length = 391 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 91/377 (24%), Positives = 141/377 (37%), Gaps = 23/377 (6%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TP + I+ Y F + YA+KA+ V+K LA LGS D Sbjct: 20 AEGQETPLLVVDLSRIKTKYEEMVTLFP--KAKIHYAMKASPATEVVKYLADLGSNFDCA 77 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL R L V A+RI + K I A GI + +S+++L + A Sbjct: 78 SIYELDRVLDCGVTADRISYGNTIKKAVHIKYAYNKGIDLYATDSKADLINIANNAPGSK 137 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I A+T + KFG L A L V G+ H+G Sbjct: 138 IFVRILVH-----GADTAE----WPLSRKFGCHPDMAVDLLVQAKNLGLV-PYGISFHVG 187 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD----YA 257 SQ + ++ A ++ + ++ + GG + P S + Sbjct: 188 SQQKDVAAWDDALAKVKYMFDWMKYEEGIKLQMINLGGGFPTNYISEVNPISVYAEEIHR 247 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---ISIKKSADKTFVILDVAMNDFMRP 314 L + + +IILEPGR +V D G+LV++V ++ +V DV + + Sbjct: 248 YLSEDFDEDEMPEIILEPGRSMVGDSGVLVSEVVLISRKSRTDLTRWVYTDVGLFQGLIE 307 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKT 371 TL +A Y + GP C++ D + + K+ GD LY T Sbjct: 308 TLGEAIKYPVYTPKMETATEKGTVILAGPTCDSTDIMYEDAAYKLPQNLEIGDKLYWLTT 367 Query: 372 GAYGAVQSG-TYNSRLL 387 GAY S +N Sbjct: 368 GAYTNSYSSVEFNGFPP 384 >gi|331005657|ref|ZP_08329024.1| putative carboxynorspermidine decarboxylase [gamma proteobacterium IMCC1989] gi|330420515|gb|EGG94814.1| putative carboxynorspermidine decarboxylase [gamma proteobacterium IMCC1989] Length = 395 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 63/397 (15%), Positives = 120/397 (30%), Gaps = 27/397 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V +P + AIE+N + + V ALKA S + + SG+ Sbjct: 12 ARVPSPCFVIDEVAIERNLSVLNYVQEKSGAKVLAALKAFSCWHLAPLVNQYLSGICASG 71 Query: 83 EGE----LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 E E VFS + + + FN S+ E A Sbjct: 72 YHEARLGYEEYTKKGEQGEVHVFSAAFSQQEFDHVLPIANHIMFNSFSQWEKYKAQGMAH 131 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + + T + + GIPI + S Sbjct: 132 QQNIQFGLRINPQH--SEGTTEIYDPCAAGSRLGIPISEFASKRLEGI-----------S 178 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + + + L + ++ +Q I+ GGG I++ Sbjct: 179 GLHFHTLCEQGLEPLRRTLAAVEEKFSDYLSAMQWINFGGGHHISHPD----YDVEGLIK 234 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 LI + ++ LEPG + G+LV++V+ + + ++ A Sbjct: 235 LIKSFAKKYNVQVYLEPGEAIAIRSGVLVSEVLDVMHTDRSQAILDTSATCHMPDTLEMP 294 Query: 319 AYHEINYIVNPAGDRLH---IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 ++ + + + G C GD I+ + GD L + Y Sbjct: 295 YRPDVFLSGGIKSGEANQLPYNYRLGGMTCLAGDVISDYSFEEPLQVGDRLMFDDMAHYT 354 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFH--IIRPRMTFQEL 410 V++ T+N L I + S+ + + + + Sbjct: 355 MVKTNTFNGIRLPA-IAIWNSKSDKLEVVKQFDYDDF 390 >gi|332184842|gb|AEE27096.1| Diaminopimelate decarboxylase [Francisella cf. novicida 3523] Length = 403 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 88/393 (22%), Positives = 160/393 (40%), Gaps = 13/393 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +LE + + PF+ Y +E + + + YALKAN +IK Sbjct: 9 NLESICKESEAPFFYYDLDMLEAHAKELQK----LPVKLWYALKANPLSRIIKVFDEQKI 64 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S GEL + LA V + I+ +G K+ +++ L G+ F +ES ++ K L+ Sbjct: 65 RFDVASIGELDQVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSDL 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISG 195 + RV N + G+ FG+ I+ + + I G Sbjct: 125 VEKNNINVEVLLRVQLMWNDQESNVLGGGRCVTPFGLSINDWKDFFNSTPSISNNMSIIG 184 Query: 196 VDMHIGSQIDQIESFHKAFK-LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + I ++ + +K + + L + +++ ID+GGG+G+ Y++ + S + Sbjct: 185 MHCFQWGNILCLDKLSQIWKTITKALLGLSEAINVSLKVIDLGGGIGVPYNASQKSVSIN 244 Query: 255 DYASLIHQYFG-NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 D S + + LE GR+ VA+ G+ +TKV+ K + ++ D + +R Sbjct: 245 DLISCFDELKKEFPNIEYWLELGRYAVAESGVYLTKVVDRKSVNNINLLVTDGGAHHLVR 304 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG--DLLYIEKT 371 P L ++ I GP+C + D + + G D L ++T Sbjct: 305 PALTGESFP-IDLLREKSCSERGDFQIHGPLCTSLDK-SGTVNLPK-DIGLNDYLIFKQT 361 Query: 372 GAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRP 403 GAYG +S + L EI+ Q +R Sbjct: 362 GAYGFTESMPFFLCHNLPAEIIFYKGQLQTVRQ 394 >gi|296112240|ref|YP_003626178.1| ornithine decarboxylase [Moraxella catarrhalis RH4] gi|295919934|gb|ADG60285.1| ornithine decarboxylase [Moraxella catarrhalis RH4] gi|326560709|gb|EGE11077.1| ornithine decarboxylase [Moraxella catarrhalis 46P47B1] gi|326561751|gb|EGE12086.1| ornithine decarboxylase [Moraxella catarrhalis 7169] gi|326571717|gb|EGE21730.1| ornithine decarboxylase [Moraxella catarrhalis BC8] gi|326571828|gb|EGE21834.1| ornithine decarboxylase [Moraxella catarrhalis BC7] gi|326578069|gb|EGE27929.1| ornithine decarboxylase [Moraxella catarrhalis O35E] Length = 391 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 91/377 (24%), Positives = 141/377 (37%), Gaps = 23/377 (6%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TP + I+ Y F + YA+KA+ V+K LA LGS D Sbjct: 20 AEGQETPLLVVDLSRIKTKYEEMVTLFP--KAKIHYAMKASPATEVVKYLADLGSNFDCA 77 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL R L V A+RI + K I A GI + +S+++L + A Sbjct: 78 SIYELDRVLDCGVTADRISYGNTIKKAVHIKYAYNKGIDLYATDSKADLINIANNAPGSK 137 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I A+T + KFG L A L V G+ H+G Sbjct: 138 VFVRILVH-----GADTAE----WPLSRKFGCHPDMAIDLLVQAKNLGLV-PYGISFHVG 187 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD----YA 257 SQ + ++ A ++ + ++ + GG + P S + Sbjct: 188 SQQKDVAAWDDALAKVKYMFDWMKYEEGIKLQMINLGGGFPTNYISEVNPISVYAEEIHR 247 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---ISIKKSADKTFVILDVAMNDFMRP 314 L + + +IILEPGR +V D G+LV++V ++ +V DV + + Sbjct: 248 YLSEDFDEDEMPEIILEPGRSMVGDSGVLVSEVVLISRKSRTDLTRWVYTDVGLFQGLIE 307 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKT 371 TL +A Y + GP C++ D + + K+ GD LY T Sbjct: 308 TLGEAIKYPVYTPKMETATEKGTVILAGPTCDSTDIMYEDAAYKLPQNLEIGDKLYWLTT 367 Query: 372 GAYGAVQSG-TYNSRLL 387 GAY S +N Sbjct: 368 GAYTNSYSSVEFNGFPP 384 >gi|326562308|gb|EGE12634.1| ornithine decarboxylase [Moraxella catarrhalis 103P14B1] gi|326569028|gb|EGE19097.1| ornithine decarboxylase [Moraxella catarrhalis BC1] gi|326575512|gb|EGE25437.1| ornithine decarboxylase [Moraxella catarrhalis 101P30B1] Length = 391 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 91/377 (24%), Positives = 141/377 (37%), Gaps = 23/377 (6%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TP + I+ Y F + YA+KA+ V+K LA LGS D Sbjct: 20 AEGQETPLLVVDLSRIKTKYEEMVTLFP--KAKIHYAMKASPATEVVKYLADLGSNFDCA 77 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL R L V A+RI + K I A GI + +S+++L + A Sbjct: 78 SIYELDRVLDCGVTADRISYGNTIKKAVHIKYAYNKGIDLYATDSKADLINIANNAPGSK 137 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I A+T + KFG L A L V G+ H+G Sbjct: 138 VFVRILVH-----GADTAE----WPLSRKFGCHPDMAVDLLVQAKNLGLV-PYGISFHVG 187 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD----YA 257 SQ + ++ A ++ + ++ + GG + P S + Sbjct: 188 SQQKDVAAWDDALAKVKYMFDWMKYEEGIKLQMINLGGGFPTNYISEVNPISVYAEEIHR 247 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---ISIKKSADKTFVILDVAMNDFMRP 314 L + + +IILEPGR +V D G+LV++V ++ +V DV + + Sbjct: 248 YLSEDFDEDEMPEIILEPGRSMVGDSGVLVSEVVLISRKSRTDLTRWVYTDVGLFQGLIE 307 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKT 371 TL +A Y + GP C++ D + + K+ GD LY T Sbjct: 308 TLGEAIKYPVYTPKMETATEKGTVILAGPTCDSTDIMYEDAAYKLPQNLEIGDKLYWLTT 367 Query: 372 GAYGAVQSG-TYNSRLL 387 GAY S +N Sbjct: 368 GAYTNSYSSVEFNGFPP 384 >gi|328947882|ref|YP_004365219.1| Diaminopimelate decarboxylase [Treponema succinifaciens DSM 2489] gi|328448206|gb|AEB13922.1| Diaminopimelate decarboxylase [Treponema succinifaciens DSM 2489] Length = 389 Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats. Identities = 79/395 (20%), Positives = 145/395 (36%), Gaps = 23/395 (5%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++LA TPFY + ++ +N + +CYA+KAN+ +++ L L Sbjct: 7 KELAEKYGTPFYLFDFEILKNRIELLNNKLPK-NAELCYAIKANA--FLLQALKDLKILF 63 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 ++ S GEL V IVFSGV KT ++I A + + +ES + L + A Sbjct: 64 EVCSNGELSICHKYNVNPNHIVFSGVVKTKEDIKNAWKMHVNTITLESLEHCRFLKEVAN 123 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + ++FG+ + + L V GV Sbjct: 124 EENGDYI-------------QNVLIRLSSGNQFGMSENDVLDALKILKQLKNVNFRGVHY 170 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 G+Q + + + + +G I+ G G Y + + + Sbjct: 171 FSGTQKKLKKIETEIQYIQDYCDNLQKMSGIEFNEIEYGPGFSFDYFAQPDFSENYNDFD 230 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + K +E GRF+ + G V++++ +K + D + ++D +N Sbjct: 231 AVAGLLEKSKYKFTIEAGRFIASSCGFYVSRIMDLKSTNDVNYCLIDGGINHLNYYGQIM 290 Query: 319 -AYHEINYIVNPAGDRLHIHA---DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 +V D +I G +C T D I + P GD L + GAY Sbjct: 291 GMKIPPVSLVKNNTDAKSDKCASFEICGSLCTTADVITKCLSLDSPAIGDFLVFKNIGAY 350 Query: 375 GAVQS-GTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + + S L I + ++ I+ R +F+ Sbjct: 351 SVTEGIYLFLSHALPCVISYDKMEYKIL--RQSFE 383 >gi|182678066|ref|YP_001832212.1| Orn/DAP/Arg decarboxylase 2 [Beijerinckia indica subsp. indica ATCC 9039] gi|182633949|gb|ACB94723.1| Orn/DAP/Arg decarboxylase 2 [Beijerinckia indica subsp. indica ATCC 9039] Length = 376 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 90/373 (24%), Positives = 149/373 (39%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY FS A DT V YA+KAN + V++ LA LGS D S E++ Sbjct: 17 PCLVLDLEVVRDNYQAFSKALP--DTRVFYAVKANPDPQVLELLARLGSCFDTASVVEIQ 74 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + LAA A+RI F K +I A G+ F V+ E+E++ + + A I Sbjct: 75 QVLAAGASADRISFGNTIKKERDIARAYALGVRLFAVDCEAEVEKIARAAPGSRVFCRIL 134 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + + KFG + +A L G+ H+GSQ Sbjct: 135 CD----------GEGAEWPLSRKFGCAPSLAPRVLEHAHRLGLQAF-GLSFHVGSQQRNP 183 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 + A + ++ + L G +Q +++GGG Y D + + ++FG Sbjct: 184 LMWDSALRSSSEIFKDLAERGITLQMVNLGGGFPTKYLRDVPAVKAYGEAIFHSLRKHFG 243 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I K ++ V I Y Sbjct: 244 NKIPETIIEPGRGMVGNAGVIEAEVVLISKKSEDDSVKWVYLDIGKFNGLAETMDEMIRY 303 Query: 326 IVNPAGDRL-HIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 + A D + GP C++ D + + + G + IE TGAY + S Sbjct: 304 PIRTAFDGDACEPCVLAGPTCDSVDVLYEKDPYLLPISLEIGSKVLIEGTGAYTTMYSSV 363 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 364 GFNGFPPLKSYVI 376 >gi|283469362|emb|CAQ48573.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus ST398] Length = 400 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVEKFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK + IL F P + H + Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIEAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|260437083|ref|ZP_05790899.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein [Butyrivibrio crossotus DSM 2876] gi|292810392|gb|EFF69597.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein [Butyrivibrio crossotus DSM 2876] Length = 391 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 75/398 (18%), Positives = 139/398 (34%), Gaps = 31/398 (7%) Query: 19 EKLAHV----VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 ++L +P Y + A+++ L G D +CYA+KAN +I+ + Sbjct: 3 KELIKECILKYGSPSYIFDLDALKERVLNIKKIL-GKDINICYAMKANP--FIIEEMKDY 59 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL--QSGIYCFNVESESELKT 132 ++ S GE V + I+ SGV KT + ++ + +G F +ES Sbjct: 60 IDRYEVCSPGEYEICQRHSVKKDVIIVSGVNKTYESMERIMSLCNGDGIFTIESAEHYDI 119 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L++ + R+ ++FGI ++ + Sbjct: 120 LSKVCKEKNIHIRVVIRL---------------TSGNQFGIDKDMFKNILLQLKDNEYLD 164 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 +G+ + G+Q + + L + G ++ G GL Y PS Sbjct: 165 FAGIHYYSGTQKKLKKVIKEVAMLEEFAKELQDEYGVATDILEYGPGLLFNYFEGEETPS 224 Query: 253 SSDYASLIHQY--FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + S + I LE GRF+ ++ G T+V+ K + + I+D ++ Sbjct: 225 FGEQLSELKDILKNIKSFKHITLEMGRFIASECGYYCTEVVDRKCNNGSEYAIVDGGIHQ 284 Query: 311 FMRPTLY-DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 ++ +I G +C D I + + GD+L + Sbjct: 285 INYYGQTLGMKKPFMDVITCNNSYELQKINICGSLCTVNDVILRDVSLPQLDKGDILIFK 344 Query: 370 KTGAYGAV--QSGTYNSRLLIPEIMVNGSQFHI-IRPR 404 GAY + + SR L I N + +R R Sbjct: 345 NCGAYSITEGMA-LFLSRELPAVIFYNKDTGFVRVRDR 381 >gi|291301207|ref|YP_003512485.1| Orn/DAP/Arg decarboxylase 2 [Stackebrandtia nassauensis DSM 44728] gi|290570427|gb|ADD43392.1| Orn/DAP/Arg decarboxylase 2 [Stackebrandtia nassauensis DSM 44728] Length = 388 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 90/375 (24%), Positives = 144/375 (38%), Gaps = 17/375 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y A+ + A T + YA+KANS ++ A G++I S GEL Sbjct: 22 AYVYDLAALSERIAAVKAALP-PQTRLFYAMKANSRPELVARAAQYCDGIEIASPGELAT 80 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIY-CFNVESESELKTLNQRAVSLGKKAPIA 147 A+AA A +++ G KT + AL G NVE EL+ L++ A G A IA Sbjct: 81 AIAAG--ARHLIYGGPSKTDAALTAALSCGTPVTVNVEGLHELRRLDRLARQHGTVAEIA 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVN TG FGI + A LPGV+++G+ +H S Sbjct: 139 LRVNRATETPGGTHRMTGTP-TPFGIDAAHLDDAVDLARRLPGVRLTGLHLHAVSNNLDA 197 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + + + + GG + +D+A+ + Sbjct: 198 AAHARFVAEALEYAADTATRHGLTWETVNLGGGIGVDPAGGSEFDLADFAARL----TRP 253 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE----- 322 I E GR+L A+ G T+V IK + +TF ++ + F P + H Sbjct: 254 AVTTIFELGRYLAAETGWYATEVTDIKTTHGRTFAVVRGGTHHFRLPAAWGYDHPAAVHP 313 Query: 323 --INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + D+ G +C D + + ++ R GD+L +TGAYG S Sbjct: 314 VDEWPYPWQRPEARDTTVDVTGELCTPRDVLCRDLPVSRLRVGDVLVFGRTGAYGWDISH 373 Query: 381 T-YNSRLLIPEIMVN 394 + S ++++ Sbjct: 374 HDFLSHPHPDTVVLD 388 >gi|302790706|ref|XP_002977120.1| hypothetical protein SELMODRAFT_232921 [Selaginella moellendorffii] gi|300155096|gb|EFJ21729.1| hypothetical protein SELMODRAFT_232921 [Selaginella moellendorffii] Length = 390 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 76/372 (20%), Positives = 128/372 (34%), Gaps = 25/372 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + + + +A YA+K N + ++ LA LG+G D+ S+ EL Sbjct: 18 FYVLDLATVTRLWKIWKSAMPR--VHPFYAVKCNPDPQLLSMLAALGAGFDVASKAELEA 75 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V I+F+ K I A ++G+ +SE EL L + + Sbjct: 76 VTQLGVAPRNIIFANPCKLPSHITEAAKAGVVYTTFDSEGELYKLKKYHPQAE----VLL 131 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R D + K+G + + L A TL K++GV H+GS + Sbjct: 132 RFRAD------DTGARCPLGVKYGAEWDECYHLLEVAKTLGI-KVAGVAFHVGSGASDVN 184 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F + K R L S G + GG ++ +++ Y + Sbjct: 185 AFAEGIKAARKLFDMAESLGLPRMTMLDIGGGFVSDGGAGVKFAAAAYEIGNALEEHFPR 244 Query: 269 CKI-----ILEPGRFLVADVGILVTKVISIKKSADKT-------FVILDVAMNDFMRPTL 316 + I EPGRF + L V + + + I D Sbjct: 245 ETMADVRIIGEPGRFFAEEAFSLAVLVFGCRVRRREEGNKTVVEYWINDGIYGSMNCLLY 304 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 A P D + I GP C+ D + + + + GD L + GAY Sbjct: 305 DHATLSDEEDDAPLLDVELHPSIIFGPTCDGLDTVLSDVWLPRLQCGDWLVFPRMGAYTK 364 Query: 377 VQSGTYNSRLLI 388 ++N + Sbjct: 365 SAGSSFNGFAVP 376 >gi|332298614|ref|YP_004440536.1| Ornithine decarboxylase [Treponema brennaborense DSM 12168] gi|332181717|gb|AEE17405.1| Ornithine decarboxylase [Treponema brennaborense DSM 12168] Length = 390 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 92/375 (24%), Positives = 150/375 (40%), Gaps = 22/375 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP + I+KNY+ N+F + YA+KAN VI + LG DI S Sbjct: 21 QELETPCIVVNLRTIKKNYIKLQNSFPF--AAIYYAVKANPANEVISLVNQLGGNFDIAS 78 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 EL + LA + +RI + K +I + G+ F +S+ +LK + + A Sbjct: 79 RYELDQVLALGISPDRISYGNTIKKAKDIAYFYEKGVRMFATDSKEDLKNIAKYAPGSRI 138 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + KFG + L + G+ H+GS Sbjct: 139 YVRILVENSATAD---------WPLSRKFGCHPDMAYDLLVQSRDSGLT-PYGISFHVGS 188 Query: 203 QIDQIESFHKAFKLLRD-LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASL 259 Q I ++ A + T + I++GGG +Y S + Sbjct: 189 QQRDIGQWNDAIAKTKYLFTALEEEENIRLSMINMGGGFPASYVQPTNDLSEYASEITRY 248 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---KTFVILDVAMNDFMRPTL 316 +H FG+ +IILEPGR LV D GILV++V+ I + + +V LD + + TL Sbjct: 249 LHDDFGDNVPQIILEPGRSLVGDSGILVSEVVLISRKNNTALYRWVYLDTGKFNGLIETL 308 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKTGA 373 ++ + GP C++ D I + K+ L + GD +Y+ GA Sbjct: 309 GESIKYPVLTEKDDPSAKEGEVILAGPTCDSMDIIYEDFKYKLPLDLKIGDRVYVLSAGA 368 Query: 374 YGAVQSGT-YNSRLL 387 Y A + +N Sbjct: 369 YTASYASVCFNGFPP 383 >gi|214091212|gb|ACJ63455.1| ornithine decarboxylase [Haliotis diversicolor supertexta] Length = 472 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 73/380 (19%), Positives = 130/380 (34%), Gaps = 32/380 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I Y + ++ YA+K N + V+K L LG+ D S+ E+ + Sbjct: 40 FFIADLGDIVAKYKKWRRLLPRVEP--FYAVKCNDDYGVLKLLGDLGTSFDCASKFEIDK 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L +P RI+++ K + A + + ++E+EL + I Sbjct: 98 VLNLGLPPSRIIYANPCKQTSFLRHAAKRNVDLMTFDNEAELLKVKAVFPDARLVLRILP 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 N + + KFG + L A L + GV H+GS ++ Sbjct: 158 PSNFKV---------QCELGMKFGCHPSKAKQLLEKAKELELS-VVGVSFHVGSGAEEAA 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F A + + Q G +D+GGG + + H + + Sbjct: 208 AFAVAVEQAYGVFQTGLDMGFPFTLLDIGGGFPGQVTAAISFEEVVAVLNPVLDHYFPAS 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK------------------SADKTFVILDVAM 308 +II EPGR+ VA L +I+ + + + Sbjct: 268 SGVRIIAEPGRYFVASAFTLTANIIAKRMVARDKSNDEHLPDQVVTGDDEPASMYYINDG 327 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 L + + V G + + + GP C+ D I ++ + G+ +Y Sbjct: 328 VYGSFNCLLFDHATVTPSVLQDGSDMTFVSSVWGPTCDGLDCITEEYRLPEMQIGEWIYF 387 Query: 369 EKTGAYGAVQSGTYNSRLLI 388 E GAY S T+N Sbjct: 388 EDMGAYTICASSTFNGMPRP 407 >gi|167523140|ref|XP_001745907.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775708|gb|EDQ89331.1| predicted protein [Monosiga brevicollis MX1] Length = 495 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 76/396 (19%), Positives = 132/396 (33%), Gaps = 48/396 (12%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ ++ + + F D YA+K N + +++ LA LG+ D S E+ Sbjct: 67 FFLVDLGSVYRQHHLFKQELP--DVTPFYAVKCNPDPMILRCLASLGANFDCASRAEIEA 124 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V ERI+++ K I A + G+ +S EL+ + I Sbjct: 125 VLGIGVTPERIIYANPCKPASHIRYAKEVGVTLMTFDSAEELRKIAGIYPEASVVLRIL- 183 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S + KFG + + + A G+ ++GV H+GS Sbjct: 184 ---------ADDSKSACRLGLKFGAVVGKQTTSLIEACKATGLNLAGVSFHVGSGCTDAA 234 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA-YHSDHRPPSSSDYASLIHQYFGNL 267 + A R + + + G +DVGGG A+ I N Sbjct: 235 VYDDAIAKARQVFRDAEAYGFAPTVLDVGGGFPGEAVAGRTPKVRFESIANSIRDAVANH 294 Query: 268 QCKI-----ILEPGRFLVADVGILVTKVISIKKS-------------------------- 296 + I EPGR+ A+ L VI+ + Sbjct: 295 FSDVSGLRLIAEPGRYYAANAMTLALSVIAKRVVAPETSGDISPSETTFQGMLDADELET 354 Query: 297 ----ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 A + + D F A E+ + ++ + GP C++ D +A Sbjct: 355 IPAGAMVNYFVNDGVYGSFNCIIFDHADVELQPLNYKKATGKKYNSTVWGPTCDSIDCVA 414 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + ++ G+ LY+ GAY + T+N Sbjct: 415 KSCQLPDLDVGEWLYVAGMGAYTGAAASTFNGFAKA 450 >gi|294849057|ref|ZP_06789801.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A9754] gi|294823949|gb|EFG40374.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A9754] Length = 400 Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats. Identities = 88/371 (23%), Positives = 149/371 (40%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERKILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G KT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPSKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALAMPKIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKAWSEKHRFPLKHINLGGGIGVNYADLTNQFEWDNFVERFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK + IL F P + H + Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|89069157|ref|ZP_01156530.1| decarboxylase, pyridoxal-dependent [Oceanicola granulosus HTCC2516] gi|89045330|gb|EAR51396.1| decarboxylase, pyridoxal-dependent [Oceanicola granulosus HTCC2516] Length = 396 Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats. Identities = 85/375 (22%), Positives = 139/375 (37%), Gaps = 19/375 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 P +E+ Y S + YA+KAN + VI L LGS D S G Sbjct: 35 FDRPTLVVDLDRVEQQYRALSAGLGR--ATIHYAVKANPAEEVIARLVALGSHFDAASRG 92 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E+ LA I F K +I A GI F +SE EL+ + + A Sbjct: 93 EIALCLAQGARPRDISFGNTIKKPSDIAWAWDRGITLFAADSEEELEKIAEHAPGARVYI 152 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + + KFG + L YA+ L ++ G H+GSQ Sbjct: 153 RLIVETSEA----------DWPLTRKFGCDASKALELLDYATDLS-LEPVGFSFHVGSQT 201 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI-HQY 263 + E + A L + ++ GH + +++GGG Y + P + A + Sbjct: 202 RRAEMWIPALDALAATWRAAQAAGHELSVLNIGGGFPAFYGEEIEAPEAYARAVMGLVTE 261 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 I+ EPGR +VA+ G +V + + + + +D+ I Sbjct: 262 RFGEVAHIMAEPGRGMVAEAGTIVAETMLVSRKSDRDVHRWVYLDIGRFSGLAETEGEAI 321 Query: 324 NYIVNPAGDRLHI-HADIVGPICETGDFIALNR--KIAL-PRPGDLLYIEKTGAYGAVQS 379 Y + D + + GP C++ D + R + L + GD + I TGAY + S Sbjct: 322 RYQLETGRDHEAMGPCILAGPSCDSADVLYEKRPVMLPLGLKSGDRVLIRNTGAYTSTYS 381 Query: 380 GT-YNSRLLIPEIMV 393 +N + + + Sbjct: 382 SVGFNGFPPLDVVCI 396 >gi|303239157|ref|ZP_07325686.1| carboxynorspermidine decarboxylase [Acetivibrio cellulolyticus CD2] gi|302593202|gb|EFL62921.1| carboxynorspermidine decarboxylase [Acetivibrio cellulolyticus CD2] Length = 379 Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 127/385 (32%), Gaps = 19/385 (4%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + KN + + + ALK S +V + G+ S E Sbjct: 9 PTPCYIVDERLLRKNLEILHSVQERTGCSILLALKGFSMHSVFPLVGQYLKGVTSSSLFE 68 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 R + E ++ + +L FN + ++ + KK Sbjct: 69 ARLGFE-KMGKEVHAYAPAYIEEEFDELIKYCDHIVFNSFDQWRKFK-DKVKNNSSKKIE 126 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 RVNP+ + + + K + G+ + ++ G+D + Sbjct: 127 CGIRVNPEYSEISTAIYNPCYKNSRLGVTLSN----------FKPDELDGID-GLHFHTM 175 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 ++ + ++ + ++ ++ +++GGG I I + Sbjct: 176 CEQNSDTLLRTIKVVDEKFGEFIKRMKWVNLGGGHHITRPD----YDIETLIRSILYFKD 231 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 I LEPG + + G LV KV+ I + + + A P + + + N Sbjct: 232 KYGVDIYLEPGEAIALNTGFLVAKVLDIVDNG--MKIAILDASAACHMPDVLEMPYRPNI 289 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 I + D + G C GD I +PGD L Y V++ T+N Sbjct: 290 IDAGSPDEYPFTYRLGGNTCLAGDVIGDYSFKQPLKPGDKLVFCDMAHYTMVKNNTFNGV 349 Query: 386 LLIPEIMVNGSQFHIIRPRMTFQEL 410 L + N + I + +++ Sbjct: 350 NLPSIALFNEEEGIKIIRQFKYEDF 374 >gi|57652470|ref|YP_185011.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus COL] gi|87160623|ref|YP_492842.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88193897|ref|YP_498682.1| hypothetical protein SAOUHSC_00082 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151220279|ref|YP_001331102.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. Newman] gi|161508391|ref|YP_001574050.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|258452269|ref|ZP_05700283.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus A5948] gi|262049760|ref|ZP_06022625.1| hypothetical protein SAD30_1859 [Staphylococcus aureus D30] gi|282923784|ref|ZP_06331461.1| diaminopimelate decarboxylase [Staphylococcus aureus A9765] gi|284023133|ref|ZP_06377531.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 132] gi|32441994|gb|AAP82070.1| SbnH [Staphylococcus aureus] gi|57286656|gb|AAW38750.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus COL] gi|87126597|gb|ABD21111.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201455|gb|ABD29265.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373079|dbj|BAF66339.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus str. Newman] gi|160367200|gb|ABX28171.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257860106|gb|EEV82940.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus A5948] gi|259162150|gb|EEW46727.1| hypothetical protein SAD30_1859 [Staphylococcus aureus D30] gi|282593026|gb|EFB98027.1| diaminopimelate decarboxylase [Staphylococcus aureus A9765] gi|315196461|gb|EFU26811.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus CGS01] gi|320139543|gb|EFW31414.1| pyridoxal-dependent decarboxylase, sheet domain protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320142140|gb|EFW33959.1| pyridoxal-dependent decarboxylase, sheet domain protein [Staphylococcus aureus subsp. aureus MRSA177] gi|329731721|gb|EGG68081.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Staphylococcus aureus subsp. aureus 21189] Length = 400 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERKILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALAMPKIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKAWSEKHRFPLKHINLGGGIGVNYADLTNQFEWDNFVERFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK + IL F P + H + Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|329732404|gb|EGG68754.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 400 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 149/371 (40%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALVMPNIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK + IL F P + H Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|196229284|ref|ZP_03128149.1| Orn/DAP/Arg decarboxylase 2 [Chthoniobacter flavus Ellin428] gi|196226516|gb|EDY21021.1| Orn/DAP/Arg decarboxylase 2 [Chthoniobacter flavus Ellin428] Length = 393 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 80/370 (21%), Positives = 141/370 (38%), Gaps = 8/370 (2%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L+ ++TP Y YS + + ++ D + Y+LKAN + +++ A G+ D+ Sbjct: 19 LSATLETPRYFYSGELLTLAWHALHSSLP-ADAQLLYSLKANPHPTIVRYFAEHGALFDV 77 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S GE+ LA +R V+ K + A+Q G+ ++S E+ T+ + A + Sbjct: 78 ASRGEMELLLATQGSLQRAVWISPCKREADYLWAVQHGLGASVIDSREEIGTVRRVAATQ 137 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 P A+ + + +FG+ + + Sbjct: 138 PDTMPSYLLRVQRRAASAGTSLWA---DSQFGVTLDEAIEFTHTLRRDGIQIAGLHGYFA 194 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + E L+ S G +++ +DVGGG G + S + Sbjct: 195 SNLFAEQEIAQNTQDLMAQALTWQASTGTSMRVLDVGGGFGWPLGVEDGELSLPRLRDCL 254 Query: 261 HQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + E GRFL A G+LV V+S+K+ T V+LD MN F P++ Sbjct: 255 APLAAEFSPGTALWFESGRFLTAGAGVLVLTVMSVKERPGTTSVVLDGGMNIFGLPSMRL 314 Query: 319 AYHE-INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + ++ + GP+C GD + + GD L I GAYGA Sbjct: 315 GFRPLTVILLAREWAGPLQPHTLFGPLCTPGDKFCEKVLLPPLKAGDRLAILHAGAYGAT 374 Query: 378 QS-GTYNSRL 386 ++ S Sbjct: 375 AGRSSFLSFP 384 >gi|167627105|ref|YP_001677605.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597106|gb|ABZ87104.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 403 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 83/396 (20%), Positives = 145/396 (36%), Gaps = 19/396 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L+ L + PF+ Y +EK+ + + YALKAN +IK Sbjct: 9 NLDSLCKKNEAPFFYYDLDMLEKHAKELQK----LPVKLWYALKANPLSKIIKVFDEQNI 64 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S GEL + L+ V + I+ +G K+ +++ L G+ F +ES ++ K L+ Sbjct: 65 NFDVASIGELDQVLSQGVDPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSDL 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + R+ N + G FG+ I+ + A IS Sbjct: 125 IEKNNINVEVLLRMQLVWNDQESNVLGGGGCVTPFGLSINDWKDFFDSA-----PDISNN 179 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS---- 252 IG Q + KL + ++ + I+V + P + Sbjct: 180 MSIIGMHCFQWGNILCLDKLSQIWKTITKALLDLSEAINVSLKIIDLGGGIGIPYNSSQK 239 Query: 253 ----SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + + + + + LE GR+ VA+ G+ +TKV+ IK + ++ D Sbjct: 240 AVSINDLISCINNLKKEFPDIEYWLELGRYAVAESGVYITKVVDIKSVNNINLLVTDGGA 299 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 +RP L ++ I GP+C + D + D L Sbjct: 300 QHLVRPALTGESFP-IELLREESCSETNDFQIHGPLCTSLDKAGIASLPKDIGLNDYLIF 358 Query: 369 EKTGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRP 403 ++TGAYG +S + L EI+ IR Sbjct: 359 KQTGAYGFTESMPFFLCHNLPAEIIFYKGHLQTIRQ 394 >gi|312376500|gb|EFR23563.1| hypothetical protein AND_12667 [Anopheles darlingi] Length = 681 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 76/386 (19%), Positives = 130/386 (33%), Gaps = 27/386 (6%) Query: 14 ENVSLEKLAH---VVQ-----TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 EN S+EKL P + I + + + YA+K N++ Sbjct: 10 ENSSVEKLIKVIAQHGMLQGRGPVNVLNLDDIVDKHKNWRQKLP--TVVPFYAVKCNNHP 67 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+++ L LG G D S EL+ L V E+I+++ KT D I A + G+ + Sbjct: 68 AILQLLVALGCGFDCASRCELQTILGLGVAPEKIIYANPAKTKDSILYARKMGVKRMTFD 127 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 S EL+ + Q I + + KFG + Sbjct: 128 SVDELEKIAQLYPDAELVLRIRYDAREAV----------LPLGRKFGCDPDREALPLLRC 177 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG-IAY 244 + + + GV H+G E+++ A + ++ G + +D+GGG Sbjct: 178 AKRHQLSVIGVSFHVGCGSRDGETYYWAIRKAIEIFDSASQLGMQMHLLDIGGGYPGGND 237 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + + A ++I EPGR+ V + V++ D + I+ Sbjct: 238 RTFDDHVHFINKALNEQIVQQRRNIEVIAEPGRYCVESAVTALVNVLAKSYDRDDSGEII 297 Query: 305 DVAMN----DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI-CETGDFIALNRKIAL 359 V + YD + I + + G C+ D IA + Sbjct: 298 RVRYYLDDGLYGSFDWYDELAIPEVQEHRRSGSPLIPSVLYGRTMCDN-DIIAKEILLPE 356 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSR 385 D L GAYG +N Sbjct: 357 HEVDDCLVFPNRGAYGMALGRGFNGV 382 >gi|307213746|gb|EFN89084.1| Ornithine decarboxylase [Harpegnathos saltator] Length = 418 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 67/376 (17%), Positives = 132/376 (35%), Gaps = 19/376 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + + + +A+K N + VIK LA L + D S+ E+++ Sbjct: 35 FYIADIGKVIAKHDEWIAKMPR--VVPHFAIKCNPDPTVIKVLAALDACFDCASKQEIKQ 92 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V +RI+F+ K I A + + V+SE EL + I Sbjct: 93 VMQHGVHGDRIIFAHPAKYPSHIIYAKKVDVKQMTVDSEYELFKIKDFFPEAKIVIRIRC 152 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 K + KFG ++ + G+ + G H+GS + E Sbjct: 153 D----------SKNTPVVLGMKFGSDPNEETVRLIQLTKDLGLNLHGFSFHVGSPCVEPE 202 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ + + + L +S G + GG + +S + Sbjct: 203 AYGRGIAMCKQLITVSKSIGCEGVQLIDIGGGFPGECGTNIDEFASIIN--EAIRDVDPA 260 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKS----ADKTFVILDVAMNDFMRPTLYDAYHEIN 324 K+I EPG + VA L + + S + ++ + + L + Sbjct: 261 IKVISEPGSYYVASSFTLASYLHSKRVILKGSKMIRMYYMNCGVFNSFIDELLGLRARVP 320 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 +++ + + GP ++ D I + + GD L + GAY + T+N Sbjct: 321 QLLSEPMSNEKFCSSLWGPTADSYDLIVKDVLLPELHIGDWLVWKDMGAYSIALASTFNG 380 Query: 385 RLLIPEI-MVNGSQFH 399 + + ++ SQ+ Sbjct: 381 FPIPVVVPIIRKSQWE 396 >gi|15923113|ref|NP_370647.1| diaminopimelate decarboxylase protein [Staphylococcus aureus subsp. aureus Mu50] gi|15925827|ref|NP_373360.1| hypothetical protein SA0119 [Staphylococcus aureus subsp. aureus N315] gi|148266550|ref|YP_001245493.1| Orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus subsp. aureus JH9] gi|150392588|ref|YP_001315263.1| Orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus subsp. aureus JH1] gi|156978453|ref|YP_001440712.1| hypothetical protein SAHV_0122 [Staphylococcus aureus subsp. aureus Mu3] gi|253316262|ref|ZP_04839475.1| hypothetical protein SauraC_09001 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255004921|ref|ZP_05143522.2| hypothetical protein SauraM_00590 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794473|ref|ZP_05643452.1| orn/DAP/Arg decarboxylase [Staphylococcus aureus A9781] gi|258407567|ref|ZP_05680703.1| orn/DAP/Arg decarboxylase [Staphylococcus aureus A9763] gi|258419840|ref|ZP_05682802.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A9719] gi|258438645|ref|ZP_05689868.1| diaminopimelate decarboxylase [Staphylococcus aureus A9299] gi|258443897|ref|ZP_05692235.1| diaminopimelate decarboxylase [Staphylococcus aureus A8115] gi|258445097|ref|ZP_05693334.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A6300] gi|258447701|ref|ZP_05695840.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A6224] gi|258455675|ref|ZP_05703630.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A5937] gi|269201775|ref|YP_003281044.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ED98] gi|282894345|ref|ZP_06302575.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A8117] gi|282928375|ref|ZP_06335978.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A10102] gi|295405394|ref|ZP_06815204.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A8819] gi|296275942|ref|ZP_06858449.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MR1] gi|297244730|ref|ZP_06928610.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A8796] gi|13700039|dbj|BAB41338.1| putative diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus N315] gi|14245890|dbj|BAB56285.1| probable diaminopimelate decarboxylase protein [Staphylococcus aureus subsp. aureus Mu50] gi|147739619|gb|ABQ47917.1| Orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus subsp. aureus JH9] gi|149945040|gb|ABR50976.1| Orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus subsp. aureus JH1] gi|156720588|dbj|BAF77005.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257788445|gb|EEV26785.1| orn/DAP/Arg decarboxylase [Staphylococcus aureus A9781] gi|257840792|gb|EEV65249.1| orn/DAP/Arg decarboxylase [Staphylococcus aureus A9763] gi|257844122|gb|EEV68509.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A9719] gi|257848204|gb|EEV72196.1| diaminopimelate decarboxylase [Staphylococcus aureus A9299] gi|257850781|gb|EEV74725.1| diaminopimelate decarboxylase [Staphylococcus aureus A8115] gi|257856005|gb|EEV78924.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A6300] gi|257858983|gb|EEV81847.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A6224] gi|257861887|gb|EEV84660.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A5937] gi|262074065|gb|ACY10038.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ED98] gi|282589959|gb|EFB95042.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A10102] gi|282763390|gb|EFC03520.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A8117] gi|285815848|gb|ADC36335.1| Siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus 04-02981] gi|294969469|gb|EFG45488.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A8819] gi|297178247|gb|EFH37494.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus A8796] gi|312828640|emb|CBX33482.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129103|gb|EFT85099.1| hypothetical protein CGSSa03_13832 [Staphylococcus aureus subsp. aureus CGS03] gi|329725668|gb|EGG62147.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Staphylococcus aureus subsp. aureus 21172] Length = 400 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 149/371 (40%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALVMPNIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK + IL F P + H Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|116335079|ref|YP_802574.1| diaminopimelate decarboxylase [Candidatus Carsonella ruddii PV] gi|116235360|dbj|BAF35208.1| diaminopimelate decarboxylase [Candidatus Carsonella ruddii PV] Length = 398 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 116/398 (29%), Positives = 188/398 (47%), Gaps = 18/398 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L+K+ P Y Y I KN Y++K N+N+ ++K ++++ Sbjct: 15 LKKIFKNFSLPIYIYDFKKILKNLYLIKK----TKIFCFYSIKTNNNKFLLKLISNIIKK 70 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 DIVS E + I+FSG GK+I EI +++ I+ N+ES EL + Sbjct: 71 FDIVSIEEFLNIIYINKKKTYIIFSGSGKSISEILISINLNIFSINIESIQELFKIFFFC 130 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 K + R+NP+I++ +H KISTGK +KFGI I I G D Sbjct: 131 NKHKKNINLMIRLNPNIDSCSHNKISTGKNTNKFGINISNIKHFLLIIKITKL-NFIGYD 189 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 HIGSQI ++ K FK + +L ++ + +D+GGG I Y+ ++ + ++Y Sbjct: 190 FHIGSQICRLSPLKKLFKTI-----KLINDYKKVNFVDIGGGKNINYYENNININFNNYY 244 Query: 258 SLIHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 I + K+I+E GRF + I+++KV +K + IL+V MND MRP Sbjct: 245 RSIKKLIKKYNLSFKLIIELGRFFFGNSCIILSKVNYLKFNKIFKIAILNVGMNDIMRPA 304 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 +Y++YH+I + + GPICE+ D ++ I L+ + G+Y Sbjct: 305 IYNSYHKIESNNIGYKIKN-----VFGPICESSDKFYNSKYI-KINSNSLIIVYSCGSYS 358 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 V S YNS+ I +I+V ++ I+ + F LI Sbjct: 359 KVMSSNYNSKKKIFDIVVYKNKIKIVYKKEKFNNLISN 396 >gi|253730474|ref|ZP_04864639.1| diaminopimelate decarboxylase protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725804|gb|EES94533.1| diaminopimelate decarboxylase protein [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 400 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 149/371 (40%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK + IL F P + H Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|167578905|ref|ZP_02371779.1| diaminopimelate decarboxylase, putative [Burkholderia thailandensis TXDOH] Length = 420 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 91/400 (22%), Positives = 147/400 (36%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y + SLH + +LA P + Y N A D V YA+K Sbjct: 27 LHYRDNSLHFCGRRVAELAAAFAEPVFLYDPQRAVDNVARLQRALGDLQRGDFRVYYAMK 86 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 87 ANRFRPLLSELRRSPIFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPD 146 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 147 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGATVTKFGIYAE 202 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ +F+ + D + ++ I++GGG Sbjct: 203 QFGAALELAARHGLTVTWLHCHAGCGYLDAQLDSFERVLDALDAFVARAPALRGINLGGG 262 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG I +EPG F+ D G+LV +V ++ ++ Sbjct: 263 LGLPHRATDRPLDLERWRAAVHARFGGRPLAIAIEPGDFIAKDAGMLVLRVAYVELKRNR 322 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V G + G I E D + + Sbjct: 323 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPA--QSVCLAGNINEALDVWGDDVSLPP 380 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 381 VEPGDFVALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 420 >gi|157103349|ref|XP_001647940.1| ornithine decarboxylase [Aedes aegypti] gi|108884772|gb|EAT48997.1| ornithine decarboxylase [Aedes aegypti] Length = 437 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 82/408 (20%), Positives = 139/408 (34%), Gaps = 30/408 (7%) Query: 1 MSAFKYFEGSLHA--ENVSLEKLAHVVQT------PFYCYSTTAIEKNYLTFSNAFDGMD 52 MS + + ++VS L + + T P + + K + + + Sbjct: 1 MSLLSVLKNRVEIVDDSVSSRDLVNRLVTQGPQEEPLHLTEVDTLVKRHYEWLQHLPRVK 60 Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 YA+K+N ++++ +G G D S E+RR L V ERI+F+ KTI + Sbjct: 61 P--YYAVKSNDEASLVEATVLMGLGYDCASMAEVRRMLELGVERERIIFAQPQKTIVSLQ 118 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 A + I ++ +A + R D K S KFG Sbjct: 119 YARKHKILTVFDSEC-----ELRKIHQHYPEAEVLIRYRFD------SKKSKVNLGSKFG 167 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + G+K+ G ++GS + F+ A K R++ S G + Sbjct: 168 CETENESKSLLHVAKQLGIKVVGWCFNVGSGCTDADVFYAAIKKGREIHDYATSIGFKFR 227 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 ID+GGG + +L Y + I EPGR+ A ++ V Sbjct: 228 MIDLGGGFMGDKGCGIEEYAVHINRALEECYPASEDIFIFAEPGRYYCAAAVTSISPVHG 287 Query: 293 IKKSADKT---------FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 + ++ + D F P + + + GP Sbjct: 288 KRILCNENDPLKIEQVFYYFNDGMYGTFYSPRYRNQTLYPIVWKSGGNLGTTYKTTLFGP 347 Query: 344 ICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 C+ DF A + + D + E GAY V S +N L I Sbjct: 348 TCDGNDFFAKDIDLPELEVSDFVVFENQGAYARVHSCRFNGFCLPKVI 395 >gi|310794283|gb|EFQ29744.1| pyridoxal-dependent decarboxylase [Glomerella graminicola M1.001] Length = 455 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 75/377 (19%), Positives = 133/377 (35%), Gaps = 36/377 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + ++ + + YA+K N + V++ LA LG+G D S+ E+ + Sbjct: 74 FFVGDLGEVYRQHMRWKLNLPRVKP--FYAVKCNPDPKVLQLLAALGTGFDCASKTEIDQ 131 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L ERI+++ KT + G+ ++ EL+ +++ I Sbjct: 132 VLNMGTAPERIIYAQPCKTTSYLRYVKAMGVKQMTFDNADELRKISKLFPEAELYLRIM- 190 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + S + KFG + L A L + + GV H+GS Sbjct: 191 ---------TDDESSLCRLSMKFGAAKEATNELLGVAKDLG-LNVVGVSFHVGSGASDPM 240 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F+KA ++ +Q R+ G ++ +D+GGG D + + Sbjct: 241 AFYKAVYDAYEVFEQGRAYGFEMKTLDIGGGFCGDTFEDMAAVLRGAL---DEYFPASSN 297 Query: 269 CKIILEPGRFLVADVGILVTK------VISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 II EPGR+ V+ + V + + V ++ + ++D H Sbjct: 298 VNIIAEPGRYYVSAAFTIACNIIARRTVDDPALNEKRYMVYVNDGLYGNFSSIMFDHQHP 357 Query: 323 -------------INYIVNPAGDRLHIHADIVGPICETGDFIALNRKI-ALPRPGDLLYI 368 N D + GP C+ D I GD LY Sbjct: 358 VAKVLRAGTSTVYDTPAANACPDGEGTRYSVWGPTCDGIDRITETISFEQELDVGDWLYF 417 Query: 369 EKTGAYGAVQSGTYNSR 385 E GAY + +N Sbjct: 418 EDMGAYTKCSATKFNGF 434 >gi|254453489|ref|ZP_05066926.1| lysine/ornithine decarboxylase, putative [Octadecabacter antarcticus 238] gi|198267895|gb|EDY92165.1| lysine/ornithine decarboxylase, putative [Octadecabacter antarcticus 238] Length = 404 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 78/393 (19%), Positives = 143/393 (36%), Gaps = 25/393 (6%) Query: 9 GSLH--AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 G L ++V + P +E+ Y G D + YA+KAN Sbjct: 28 GHLTSTFDDVVENAIFEH---PTLVMDVNRVEQQYYALKAGLGGAD--IHYAVKANPAPE 82 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I+ L LGS D S GE+ L A + F K +I A +G+ F+ ++ Sbjct: 83 IIERLVKLGSHFDAASRGEIELVLGAGASPSDVSFGNTIKRASDIAYAHAAGVTLFSADA 142 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E++ + Q A + + KFG L A Sbjct: 143 IEEIEKIAQHAPGAQVYIRLIVESSEA----------DWPLSRKFGCDRDMAIDLLDRAR 192 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 L + G+ H+GSQ + + + + + GH + +++GGG Y Sbjct: 193 ALG-LDPVGLSFHVGSQTRKASMWGPTLDEMVKIWDAAKEAGHALSLLNIGGGFPAFYGQ 251 Query: 247 DHRPPSSSDY-ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT-FVIL 304 D P+ + +++ EPGR LVA+ G +V +V+ + + + + + Sbjct: 252 DIEAPTDYAASVMDQVRSRFGEVARVMAEPGRGLVAEAGAIVAEVMLVSRKSSRDLHRWV 311 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL--NRKIAL-PR 361 +++ F + I D + GP C++ D + + + + Sbjct: 312 YLSIGRFSGLAETEGEAIRYQITTLRDDDPVGPCVLAGPSCDSADVLYEKQPVLLPMTLK 371 Query: 362 PGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 GD + I GAY + S +N +++V Sbjct: 372 SGDRIVIRNCGAYTSSYSSVGFNGFP-PLDVLV 403 >gi|16118733|gb|AAL14568.1|AF416740_3 LysA [Erwinia chrysanthemi] Length = 411 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 89/388 (22%), Positives = 153/388 (39%), Gaps = 16/388 (4%) Query: 12 HAENVSLEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 H +V + L P + Y TA+ ++ A + YA+KANS + ++ Sbjct: 7 HVHDVIVL-LQQQHTDPLAAFVYDLTALRQHVSEVMAALP-PGVELYYAIKANSEKPILD 64 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 +A L G +I S GE+ R + VFSG GK + DLAL+ G+ +VES E Sbjct: 65 AIAPLVHGFEISSGGEIARVAGCGTR-KPFVFSGPGKLDSDFDLALEQGVEAVHVESRHE 123 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + L QRA G P+ RVNP++ ++ K++ FG+ + Sbjct: 124 IARLQQRARQHGVVQPVFIRVNPELASSLTSKLAMAGTPTPFGMDEADLADAVRDVDNAS 183 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID-----VGGGLGIAY 244 +++ G +H S + + L Q ++ + QHI G G+ Sbjct: 184 HLQLKGFHVHAMSHQMVVARHQQLLDLYLTRWPQWKALSAHPQHITHLNVGGGIGVPYLT 243 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 P+ DY + EPGRF+ A G +V+ K+S K F++ Sbjct: 244 PERFDWPALCDY-LRTRLAQQPDAPIVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVC 302 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGD--RLHIHADIVGPICETGDFIALNRKIALPRP 362 + F P H + ++ + +VG +C + ++ ++++ Sbjct: 303 RGGTHQFRLPVAQGHDHPVIHLPLTSAPTTGETRDWTVVGQLCTPKNVLSRDQRLTDVNI 362 Query: 363 GDLLYIEKTGAYGA--VQSGTYNSRLLI 388 GDLL + GAYG + + Sbjct: 363 GDLLVLPLAGAYGYNISHA-DFLCHPRP 389 >gi|71005058|ref|XP_757195.1| hypothetical protein UM01048.1 [Ustilago maydis 521] gi|46096557|gb|EAK81790.1| hypothetical protein UM01048.1 [Ustilago maydis 521] Length = 519 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 77/410 (18%), Positives = 137/410 (33%), Gaps = 64/410 (15%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + +L + A + + YA+K N + V++ L LG+G D S GE+ Sbjct: 101 FFVADLSEVYRQHLRWMRALPRI--VPFYAVKCNPDPYVLQLLGALGTGFDCASNGEIEA 158 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L + RI+++ K + A + ++ EL+ + + S I Sbjct: 159 VLKLGINPARIIYANPCKAASFVRHAAAHNVGLTTFDNMDELEKMKRYHPSCKLVVRIL- 217 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG P+ + L A L + + GV H+GS + Sbjct: 218 ---------TDDSKSACQLGLKFGAPLASVPRLLERARELE-LDVVGVSFHVGSGCYDPD 267 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----------RPPSSSDYAS 258 SF A R + + G + +DVGGG G P Sbjct: 268 SFRDAVYRARCAFEMGKQAGFSFDLLDVGGGFGHDNFEMVAGVLGPAIDAYFPDEDFAPG 327 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK------SADKTFVILDVAMNDFM 312 +II EPGRF V L T +I++++ + + Sbjct: 328 GKEVVGKVNGLRIIAEPGRFYVHSAFALATNIIAVRRGEPSAAMDHVEATAPKAQVMYYQ 387 Query: 313 RPTLYDAYHEINYIVNPAGDR----------------------------------LHIHA 338 LY +++ + + + Sbjct: 388 NDGLYGSFNCVIFDHVKVHPKVLTLGHEYVYEPTIGSPGVRAVSAADSRLQQEAMTLESC 447 Query: 339 DIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 + GP C++ D + + ++ + GD L E GAY + T+N Sbjct: 448 SVWGPTCDSIDCVRDHVELPKGLQVGDWLVYENMGAYTICAASTFNGIRR 497 >gi|326503090|dbj|BAJ99170.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 408 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 127/358 (35%), Gaps = 14/358 (3%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + Y + A G+ + CYA+K N A++ LA LG+G D S E+ Sbjct: 51 FYVFDLARVVDLYRGWRRALPGVRS--CYAVKCNPEPALLGALAALGAGFDCASRREMEA 108 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V IV++ K ++ A + G+ +SE E+ + + I Sbjct: 109 VLALGVQPGSIVYANPCKPEAHLEYAAEVGVNLATYDSEEEVVKVKRCHPGCELILRIK- 167 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + K+G ++ L A G+ ++GV H+GS + Sbjct: 168 --------GPDGGEARVDLGTKYGAHEDEVLPLLRAAQ-REGLNVAGVSFHVGSGASNTD 218 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A + R + + G + GG ++ A+L + Sbjct: 219 VYRGAIEAARGVFDTAAALGMPPMRVLDIGGG-FMAGPAFDEAAAVINAALERYFGELPC 277 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI-V 327 ++I EPGR+ + +VI + + +D + + D Y Sbjct: 278 VEVIGEPGRYFAETAFTMAARVIGKRTRGEVREYWIDDGLYGTLSCIPMDHYVPRPRPLA 337 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 P + + GP C++ D + ++ GD L + GAY +N Sbjct: 338 APRAGEKTYTSTVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTASGSNFNGF 395 >gi|87200351|ref|YP_497608.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM 12444] gi|87136032|gb|ABD26774.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM 12444] Length = 408 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 88/398 (22%), Positives = 142/398 (35%), Gaps = 14/398 (3%) Query: 7 FEGSLHAENVSLEKLA-HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 +G L + + L TP + YS + + A + YA+KAN Sbjct: 14 IDGELAVDGHKVTDLVMQAGGTPLFVYSRALLTRRVQDLRAAMPE-RLAIHYAVKANPYI 72 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 ++ + L G DI S GEL A + + F+G GK E++ A+ + N+E Sbjct: 73 PLLSHMLELVDGFDIASGGELAIVRDAGIDPAMVSFAGPGKRDAELEAAIAA-AVTLNLE 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 SE E A LG +A RVNPD + G + FGI ++ +L Sbjct: 132 SEGEATRALAIAGRLGIVPRLAIRVNPDFDLKGSGMKMGGGAK-PFGIDAERVPALARKL 190 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + + + + + G + ++GGG GI Y Sbjct: 191 ISAGAEWRGFHIFAGSQALSADAIIETQAQTIGLAARLAEETGAPLPKCNLGGGFGIPYF 250 Query: 246 SDHRPPSSSDYA-----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 P +E GR+LV + GI + VI K+S + Sbjct: 251 PGDEPVDVVAVGAALGDQFAALPDVLRDTAFCIELGRYLVGEAGIYLATVIDRKESHGEV 310 Query: 301 FVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 +++ D ++ + + I G + A IVG +C D +A Sbjct: 311 YLVTDGGLHHQLAASGNFGTVVRRNYPSAIATRFGAAVEEEASIVGCLCTPLDRLADKGG 370 Query: 357 IALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 GDL+ I GAYGA S + + E++V Sbjct: 371 FPRTDTGDLVVIFCAGAYGASASPAAFLGQGPAREMLV 408 >gi|253733776|ref|ZP_04867941.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH130] gi|253728243|gb|EES96972.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH130] Length = 400 Score = 143 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 149/371 (40%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALAMPKIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK + IL F P + H Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|302692730|ref|XP_003036044.1| hypothetical protein SCHCODRAFT_81402 [Schizophyllum commune H4-8] gi|300109740|gb|EFJ01142.1| hypothetical protein SCHCODRAFT_81402 [Schizophyllum commune H4-8] Length = 477 Score = 143 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 70/377 (18%), Positives = 135/377 (35%), Gaps = 34/377 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + ++ A YA+K N + V++ LA LG+G D S E+ + Sbjct: 83 FFVADLGQVALQHERWTTALPE--VHPFYAVKCNPDPYVLRLLAALGTGFDCASNNEIAQ 140 Query: 89 ALAA-PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L + +RI+F+ K + A ++G++ ++ EL + + + I Sbjct: 141 VLKIGGIDPDRIIFANPCKATSFVRAAGRAGVHTMTFDNADELHKVARTHPAARLVLRIL 200 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + + KFG P+ L A +L + + GV H+GS Sbjct: 201 ----------TDDSKALCRLGLKFGAPLAAALGLLETARSLG-LNVVGVSFHVGSGCYDP 249 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + + A R G+ +D+GGG A Sbjct: 250 DVYADAIARAAAAFAMGRKAGYEFNLLDIGGGFEDATFEAAARVLRDAINVHFPDR-HER 308 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKT------------FVILDVAMNDFMRPT 315 +II EPGRF V+ + T +I+ + + ++ ++ + Sbjct: 309 GIRIIAEPGRFFVSTAFSIATNIIARRATDEENANAGESDDEVKAMYYINDGVYGAFNCI 368 Query: 316 LYDAYHEINYIVNPAGD------RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYI 368 ++D Y+++ G + GP C++ D ++ + + GD L Sbjct: 369 MFDHQVVQPYVLSMGGSFHVPSGAPMQTCSVWGPTCDSIDLVSKRATLPCALQVGDWLGF 428 Query: 369 EKTGAYGAVQSGTYNSR 385 + GAY + +N Sbjct: 429 DNMGAYTVCAASQFNGF 445 >gi|302546570|ref|ZP_07298912.1| pyridoxal-dependent decarboxylase [Streptomyces hygroscopicus ATCC 53653] gi|302464188|gb|EFL27281.1| pyridoxal-dependent decarboxylase [Streptomyces himastatinicus ATCC 53653] Length = 396 Score = 143 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 87/372 (23%), Positives = 141/372 (37%), Gaps = 12/372 (3%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 P Y Y TA++ + +A + YA KAN V++ LA +G ++ S GE Sbjct: 21 GLPAYIYDLTALDAHAREIRDALP-PHVELYYAAKANPEPPVLRALAPYVTGYEVASGGE 79 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L A P + F G GKT E+ AL+ G+ F+VESE EL+ L+ A Sbjct: 80 LAHVREAV-PERPLAFGGPGKTETELRRALELGVERFHVESEHELRLLSSLADRPVDVLL 138 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 D G+ FG+ ++ + +++ G+ H+ S +D Sbjct: 139 RVNLPLTDEALGGAALAMGGRPS-PFGLDPDRVERCLPLFTPDGPLRLRGIHAHLASGLD 197 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + A + + +G ++ ++VGGG+G+ Y Y + Sbjct: 198 APDQTAVAAGIADWTRELSDRHGLDLTEVNVGGGMGVDYLRPDTRFDWKAYGEGLAGVAD 257 Query: 266 NLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + +EPGR L A G VT+V+ +K S + F +L + P H Sbjct: 258 RNPGLTLRIEPGRALTAYCGWYVTEVLDLKHSRGEAFAVLRGGTHHLRTPAAKAHDHPFQ 317 Query: 325 YIVNPAGDRLH-------IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + DR +VG +C D +A +A R GD + GAY Sbjct: 318 VLPAADWDRDWPRPTASGEPVTLVGQLCTPKDVLARGVPVAELRAGDRIAFAMAGAYAWN 377 Query: 378 QSGT-YNSRLLI 388 S + Sbjct: 378 ISHHDFLMHPKP 389 >gi|167921577|ref|ZP_02508668.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei BCC215] Length = 419 Score = 143 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 89/400 (22%), Positives = 148/400 (37%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y +LH + +LA P + Y N A D + YA+K Sbjct: 26 LHYRGNALHFCGRDVAELAAAFAEPVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMK 85 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 86 ANRFRPLLSELRRSPLFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPG 145 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 146 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGAAVTKFGIYAE 201 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ ++F+ + D + ++ I++GGG Sbjct: 202 QFGAALELAARHGLAVTWLHCHAGCGYLDAQLESFERVLDALDAFAARVPGLRGINLGGG 261 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG+ I +EPG F+ D G+LV +V ++ ++ Sbjct: 262 LGLPHRATDRPLDLERWRAAVHARFGSRPLAIAIEPGDFIAKDAGMLVLRVAYVELKRNR 321 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V G + G I E D + + Sbjct: 322 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPA--QSVCVAGNINEALDVWGNDVSLPP 379 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 380 VEPGDFIALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 419 >gi|50546571|ref|XP_500755.1| YALI0B11330p [Yarrowia lipolytica] gi|17432156|emb|CAC80209.1| ornithine decarboxylase [Yarrowia lipolytica] gi|49646621|emb|CAG83002.1| YALI0B11330p [Yarrowia lipolytica] Length = 449 Score = 143 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 75/370 (20%), Positives = 135/370 (36%), Gaps = 29/370 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + ++ +SN YA+K N + V++ LA LG+G D S E++ Sbjct: 75 FFVADLGIVYSQFMRWSNCLPR--VTPFYAMKCNGDPKVLQLLAALGTGFDCASRNEIQT 132 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V +RI+++ K I A G+ ++ EL + + I Sbjct: 133 ILDLGVSQDRIIYAHPCKVASYIRYASSVGVEKMVFDNAEELYKCAKYHPTAKLFLRIV- 191 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + K+G + SL A L + ++GV H+GS Sbjct: 192 ---------TDDSQSLCQFSVKYGAALENTQSLLQLAKDLG-LNVAGVSFHVGSGAGDPN 241 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F A + + + Q + G ++ +DVGGG + Sbjct: 242 AFLDAVRNAKRVFDQGAAIGMHLNTLDVGGGFSDDSFESSAAVLGDAL---DKYFPEESG 298 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE------ 322 ++ EPGRF V++ + + VI+ + ++ +L + + H+ Sbjct: 299 VNLMAEPGRFFVSEAFTIASHVIARRIIENQNKAMLYLNDGVYGNMNCILFDHQEPVPKV 358 Query: 323 ------INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYG 375 Y + + GP C+ D I+ + ++ L GD +Y GAY Sbjct: 359 LTYQGKFMYGERYQKQKSSQDVSVWGPTCDGIDCISKSCQLPVLLDVGDWMYFTSFGAYT 418 Query: 376 AVQSGTYNSR 385 S T+N Sbjct: 419 VAASTTFNGF 428 >gi|82749837|ref|YP_415578.1| diaminopimelate decarboxylase protein [Staphylococcus aureus RF122] gi|82655368|emb|CAI79750.1| probable diaminopimelate decarboxylase protein [Staphylococcus aureus RF122] Length = 400 Score = 143 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 149/371 (40%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-NNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI + + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDDVDDVIEAALAMPKIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKAWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK + IL F P + H + Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|93004868|ref|YP_579305.1| ornithine decarboxylase [Psychrobacter cryohalolentis K5] gi|92392546|gb|ABE73821.1| ornithine decarboxylase [Psychrobacter cryohalolentis K5] Length = 391 Score = 143 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 88/379 (23%), Positives = 142/379 (37%), Gaps = 23/379 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPF I+ Y F + YA+KA+ VI LA LGS D S EL Sbjct: 25 TPFLVVDLNRIKIKYHEMVGFFPH--AKIHYAMKASPAVEVINLLAELGSNFDCASIYEL 82 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R L V RI + K + + A + G+ + +SE++LK + + A I Sbjct: 83 DRVLDCGVEPSRISYGNTIKKPEHVKYAFEKGVDLYATDSEADLKNIAKHAPGSKIFVRI 142 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + KFG + L A L V G+ H+GSQ Sbjct: 143 LVQ---------GSDTAEWPLSRKFGCHPNMAIELLIQAQELGLV-PYGISFHVGSQQKD 192 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY----ASLIHQ 262 + ++ A ++ + +++ + GG A + P + L Sbjct: 193 VAAWDDALAKVKYMFDWMKNEEGIKLQMINLGGGFPANYLSEVNPIKVYAEEIQSYLSDD 252 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---KTFVILDVAMNDFMRPTLYDA 319 Y +IILEPGR LV G+LV+ V+ I + + +V DV + + TL +A Sbjct: 253 YSAEDMPEIILEPGRSLVGGSGVLVSDVVLISRKSHTDLTRWVYTDVGLFQGLIETLGEA 312 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIA-LPRPGDLLYIEKTGAYGA 376 Y + GP C++ D + ++ GD ++ TGAY Sbjct: 313 IKYPVYTPKMETSTSAGTVVLAGPTCDSTDIMYEEAGYQLPEELEIGDKIFWLTTGAYTN 372 Query: 377 VQSG-TYNSRLLIPEIMVN 394 S +N + + V+ Sbjct: 373 SYSSIEFNGFPPLEVVYVD 391 >gi|53717037|ref|YP_106056.1| putative diaminopimelate decarboxylase [Burkholderia mallei ATCC 23344] gi|67639826|ref|ZP_00438658.1| putative diaminopimelate decarboxylase [Burkholderia mallei GB8 horse 4] gi|124381186|ref|YP_001025951.1| putative diaminopimelate decarboxylase [Burkholderia mallei NCTC 10229] gi|126446956|ref|YP_001078041.1| putative diaminopimelate decarboxylase [Burkholderia mallei NCTC 10247] gi|166999787|ref|ZP_02265617.1| putative diaminopimelate decarboxylase [Burkholderia mallei PRL-20] gi|237508192|ref|ZP_04520907.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei MSHR346] gi|254176386|ref|ZP_04883044.1| putative diaminopimelate decarboxylase [Burkholderia mallei ATCC 10399] gi|254200911|ref|ZP_04907276.1| putative diaminopimelate decarboxylase [Burkholderia mallei FMH] gi|254204874|ref|ZP_04911227.1| putative diaminopimelate decarboxylase [Burkholderia mallei JHU] gi|52423007|gb|AAU46577.1| putative diaminopimelate decarboxylase [Burkholderia mallei ATCC 23344] gi|126239810|gb|ABO02922.1| putative diaminopimelate decarboxylase [Burkholderia mallei NCTC 10247] gi|147748523|gb|EDK55598.1| putative diaminopimelate decarboxylase [Burkholderia mallei FMH] gi|147754460|gb|EDK61524.1| putative diaminopimelate decarboxylase [Burkholderia mallei JHU] gi|160697428|gb|EDP87398.1| putative diaminopimelate decarboxylase [Burkholderia mallei ATCC 10399] gi|235000397|gb|EEP49821.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei MSHR346] gi|238520434|gb|EEP83894.1| putative diaminopimelate decarboxylase [Burkholderia mallei GB8 horse 4] gi|243064101|gb|EES46287.1| putative diaminopimelate decarboxylase [Burkholderia mallei PRL-20] gi|261826192|gb|ABM99332.2| putative diaminopimelate decarboxylase [Burkholderia mallei NCTC 10229] Length = 419 Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 89/400 (22%), Positives = 147/400 (36%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y +LH + +LA P + Y N A D + YA+K Sbjct: 26 LHYRGNALHFCGRDVAELAAAFAEPVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMK 85 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 86 ANRFRPLLSELRRSPLFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPG 145 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 146 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGAAVTKFGIYAE 201 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ ++F+ + D + ++ I++GGG Sbjct: 202 QFGAALELAARHGLAVTWLHCHAGCGYLDAQLESFERVLDALDAFAARVPGLRGINLGGG 261 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG I +EPG F+ D G+LV +V ++ ++ Sbjct: 262 LGLPHRATDRPLDLERWRAAVHARFGGRPLAIAIEPGDFIAKDAGMLVLRVAYVELKRNR 321 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V G + G I E D + + Sbjct: 322 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPA--QSVCVAGNINEALDVWGNDVSLPP 379 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 380 VEPGDFIALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 419 >gi|225719632|gb|ACO15662.1| Diaminopimelate decarboxylase [Caligus clemensi] Length = 445 Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 85/381 (22%), Positives = 147/381 (38%), Gaps = 21/381 (5%) Query: 31 CYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + + AF G + +A+KAN + V+ G G + S E+ Sbjct: 24 IFDLDYFNSRITSLLKAFPSDGQNLQHTFAVKANPLRGVLLAAKARGLGAECASISEVLL 83 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP-IA 147 +L+ +++F KT ++I +AL SG+ K P + Sbjct: 84 SLSLGFEPCKVIFDSPCKTREDIRIALNSGVVMNLDNEREMGLVHEILQEGNVKDRPLVG 143 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NP + +ST K KFG+P+ + + ++GV +H+GSQ + Sbjct: 144 LRINPVVGGGDFDILSTATKASKFGLPLCENTKERILSLFEECGWLNGVHIHVGSQGVPL 203 Query: 208 ESFHKAFKLLRDLTQQLRSNG--HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF- 264 + F K L + ++ S ++ +D+GGGL +Y + P +A + Sbjct: 204 KKFVDGAKKLMEFVHKIESCRGGRLLETVDIGGGLSTSYILEDVEPKEFTFALYKEELSK 263 Query: 265 -----GNLQCKIILEPGRFLVADVGILVTKVISIKKS--ADKTFVILDVAMNDFMRPTLY 317 + + ++I E GR L G +T+V IK+ + + V +N F+R T Sbjct: 264 AVPELFDGRRRVITEFGRSLALKAGKTLTRVEHIKEWIPEIRPIIQTHVGVNQFIRETYL 323 Query: 318 DAYHEINY-------IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + DI GP+C GD++ + + PGD+L I Sbjct: 324 PDTWSHRISLLNPLGNTKTCAPENKVLYDIAGPLCFQGDYLQSSVSLPSATPGDVLAIHD 383 Query: 371 TGAYGAVQSGTYNSRLLIPEI 391 TGAY YNS + Sbjct: 384 TGAYTMSMYSRYNSI-RPSVV 403 >gi|254358992|ref|ZP_04975264.1| putative diaminopimelate decarboxylase [Burkholderia mallei 2002721280] gi|148028179|gb|EDK86139.1| putative diaminopimelate decarboxylase [Burkholderia mallei 2002721280] Length = 419 Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 88/400 (22%), Positives = 147/400 (36%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y +LH + +LA P + Y N A D + YA+K Sbjct: 26 LHYRGNALHFCGRDVAELAAAFAEPVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMK 85 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 86 ANRFRPLLSELRRSPLFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPG 145 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 146 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGAAVTKFGIYAE 201 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ ++F+ + D + ++ I++GGG Sbjct: 202 QFGAALELAARHGLAVTWLHCHAGCGYLDAQLESFERVLDALDAFAARVPGLRGINLGGG 261 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG + +EPG F+ D G+LV +V ++ ++ Sbjct: 262 LGLPHRATDRPLDLERWRAAVHARFGGRPLALAIEPGDFIAKDAGMLVLRVAYVELKRNR 321 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V G + G I E D + + Sbjct: 322 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPA--QSVCVAGNINEALDVWGNDVSLPP 379 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 380 VEPGDFIALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 419 >gi|167896953|ref|ZP_02484355.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 7894] Length = 419 Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 89/400 (22%), Positives = 148/400 (37%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y +LH + +LA P + Y N A D + YA+K Sbjct: 26 LHYRGNALHFCGRDVAELAAAFAEPVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMK 85 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 86 ANRFRPLLSELRRSPLFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPG 145 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 146 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGAAVTKFGIYAE 201 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ ++F+ + D + ++ I++GGG Sbjct: 202 QFGAALELAARHGLAVTWLHCHAGCGYLDAQLESFERVLDALDAFAARVPGLRGINLGGG 261 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG+ I +EPG F+ D G+LV +V ++ ++ Sbjct: 262 LGLPHRATDRPLDLERWRAAVHARFGSRPLAIAIEPGDFIAKDAGMLVLRVAYVELKRNR 321 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V G + G I E D + + Sbjct: 322 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPA--QSVCVAGNINEALDVWGNDVSLPP 379 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 380 VEPGDFIALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 419 >gi|160943877|ref|ZP_02091107.1| hypothetical protein FAEPRAM212_01376 [Faecalibacterium prausnitzii M21/2] gi|158444553|gb|EDP21557.1| hypothetical protein FAEPRAM212_01376 [Faecalibacterium prausnitzii M21/2] Length = 403 Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 72/380 (18%), Positives = 121/380 (31%), Gaps = 15/380 (3%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + TP Y + +N + A KA SN V LA +G + Sbjct: 23 RLPTPCYLLDEAQLRRNGEILLGVQQRTGCRILLAQKAFSNFNVYPVLAPYLAGTEASGL 82 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R E VF +T + +L + FN S+ +A Sbjct: 83 YESRLGREELPEKENHVFCAAYRTDEFEELLQYADHIVFNSPSQLAKFGPAAKAAGKSIG 142 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 I + H+ + G Q + A LP + + Q Sbjct: 143 LRINPECSTQ---EGHEIYDPCAPGSRLGTTRAQWDAAVAAHPELPALLDGLHFHTLCEQ 199 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + A + ++ ++ ++ GGG I + S I Sbjct: 200 DADALAVTLAA-----VEKKFADLLPRMKWLNFGGGHHITRPG----YALDTLESCILSV 250 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG + G LVT V+ ++ D + ILD++ + Y Sbjct: 251 RQKYGVQVYLEPGEAWALNAGYLVTTVLDTLRNGDTSLAILDMSAACHTPDVIEMPYRPP 310 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 AG++ H + GP C GD I A GD L Y ++ T+N Sbjct: 311 LLDAGEAGEKAH-TVRLGGPTCLAGDIIGDYSFNAPLAEGDKLIFGDMAIYTTCKNNTFN 369 Query: 384 SRLLIPEIMV--NGSQFHII 401 L P ++ +G+ ++ Sbjct: 370 GMPLPPIWLLGADGNCRELV 389 >gi|261369009|ref|ZP_05981892.1| carboxynorspermidine decarboxylase [Subdoligranulum variabile DSM 15176] gi|282568883|gb|EFB74418.1| carboxynorspermidine decarboxylase [Subdoligranulum variabile DSM 15176] Length = 402 Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 71/368 (19%), Positives = 117/368 (31%), Gaps = 13/368 (3%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP Y A+ +N + V A KA SN + LA +G + Sbjct: 22 AELPTPCYLLDEGALARNGQILGDLAARTGCKVLLAQKAFSNYDLYPVLAPCLAGTEASG 81 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R E VF + + +L + FN ++ +A Sbjct: 82 LFEARLGAEEMPGKEVHVFCAAYREDEMAELLRWADHIVFNSPAQLAKFGPMAKAAGKSV 141 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + H + G Q + A LP + + Sbjct: 142 GLRVNPECSTQ---EGHAIYDPCAPGSRLGTTRAQWDAAVAEHPALPDLLDGLHFHTLCE 198 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 Q + L + + R +Q +++GGG I + I + Sbjct: 199 QDADALAV-----TLDAVAAKFRDLLPRMQWLNMGGGHHITRPG----YDVATLEKCIAR 249 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + LEPG + G +T+V+ + + D T ILD + M + Y Sbjct: 250 AQADWGVTVYLEPGEACALNAGYFLTRVLDVVHNGDTTVAILDASAACHMPDVIEMPYRP 309 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 AG++ + GP C GD I A P+PGDLL Y ++ T+ Sbjct: 310 PLLGSADAGEKP-CTVRLAGPTCLAGDVIGDYSFDAEPQPGDLLVFGDMAIYTTCKNNTF 368 Query: 383 NSRLLIPE 390 N L Sbjct: 369 NGMPLPAI 376 >gi|156392831|ref|XP_001636251.1| predicted protein [Nematostella vectensis] gi|156223352|gb|EDO44188.1| predicted protein [Nematostella vectensis] Length = 416 Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 78/379 (20%), Positives = 131/379 (34%), Gaps = 32/379 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + + ++ YA+K N++ AV+K LA LG G D S+GE++ Sbjct: 40 FYIVDLADVVLKHKKWVQLLPRVEP--FYAMKCNNDPAVLKLLAGLGLGFDCASKGEIQT 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V ++IV++ K I A Q + ++E EL + + I Sbjct: 98 ILGLGVSPKKIVYANPCKQASHIKYASQHDVAMTTFDNEMELHKIKKLYPDAQLILRIR- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG P+ Q L A L + GV H+GS Sbjct: 157 ---------TDDSKSLCQLGIKFGAPLKQCRHLLKVAQDLGL-NVVGVSFHVGSGCFDAS 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ A R + G N +D+GGG ++ + + + Sbjct: 207 AYATAVIAARSVFNLAVQFGFNCTLLDIGGGFPGDPNAAITFEEICTTINPLLEEHFPPS 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISI-----------------KKSADKTFVILDVAMN 309 +II EPGR+ + L V S ++ + Sbjct: 267 SGVRIIAEPGRYYSSSSFTLAVNVYSRREVQSSSVLAEDVTAPENNGNQGFMYYVNDGVY 326 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 ++D V + + I GP C++ D I N + G+ L+ + Sbjct: 327 GSFNCLIFDHATVEAIPVKESSGQPLYQTSIWGPTCDSMDCITKNMMLPKVEVGEWLFFK 386 Query: 370 KTGAYGAVQSGTYNSRLLI 388 GAY + T+N Sbjct: 387 YMGAYTQSAASTFNGFKKP 405 >gi|167818500|ref|ZP_02450180.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 91] Length = 419 Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 87/400 (21%), Positives = 146/400 (36%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y +LH + +LA P + Y N A D + YA+K Sbjct: 26 LHYRGNALHFCGRDVAELAAAFAEPVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMK 85 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 86 ANRFRPLLSELRRSPLFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPG 145 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 146 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGAAVTKFGIYAE 201 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ ++F+ + + ++ I++GGG Sbjct: 202 QFGAALELAARHGLAVTWLHCHAGCGYLDAQLESFERVLGALDAFAARVPGLRGINLGGG 261 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG + +EPG F+ D G+LV +V ++ ++ Sbjct: 262 LGLPHRATDRPLDLERWRAAVHARFGGRPLALAIEPGDFIAKDAGMLVLRVAYVELKRNR 321 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V G + G I E D + + Sbjct: 322 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPA--QSVCVAGNINEALDVWGNDVSLPP 379 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 380 VEPGDFIALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 419 >gi|134280746|ref|ZP_01767456.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 305] gi|134247768|gb|EBA47852.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 305] Length = 419 Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 88/400 (22%), Positives = 147/400 (36%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y +LH + +LA P + Y N A D + YA+K Sbjct: 26 LHYRGNALHFCGRDVAELAAAFAEPVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMK 85 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 86 ANRFRPLLSELRRSPLFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPG 145 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 146 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGAAVTKFGIYAE 201 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ ++F+ + D + ++ I++GGG Sbjct: 202 QFGAALELAARHGLAVTWLHCHAGCGYLDAQLESFERVLDALDAFAARVPGLRGINLGGG 261 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG + +EPG F+ D G+LV +V ++ ++ Sbjct: 262 LGLPHRATDRPLDLERWRAAVHARFGGRPLALAIEPGDFIAKDAGMLVLRVAYVELKRNR 321 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V G + G I E D + + Sbjct: 322 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPA--QSVCVAGNINEALDVWGNDVSLPP 379 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 380 VEPGDFIALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 419 >gi|53721338|ref|YP_110323.1| diaminopimelate decarboxylase [Burkholderia pseudomallei K96243] gi|126444939|ref|YP_001061533.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 668] gi|126455535|ref|YP_001074474.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 1106a] gi|167741322|ref|ZP_02414096.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 14] gi|167848398|ref|ZP_02473906.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei B7210] gi|167913634|ref|ZP_02500725.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 112] gi|242311330|ref|ZP_04810347.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 1106b] gi|254189383|ref|ZP_04895893.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei Pasteur 52237] gi|254195342|ref|ZP_04901770.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei S13] gi|254262869|ref|ZP_04953734.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 1710a] gi|254299440|ref|ZP_04966889.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 406e] gi|52211752|emb|CAH37751.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei K96243] gi|126224430|gb|ABN87935.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 668] gi|126229303|gb|ABN92716.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 1106a] gi|157809452|gb|EDO86622.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 406e] gi|157937061|gb|EDO92731.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei Pasteur 52237] gi|169652089|gb|EDS84782.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei S13] gi|242134569|gb|EES20972.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 1106b] gi|254213871|gb|EET03256.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 1710a] Length = 419 Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 89/400 (22%), Positives = 147/400 (36%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y +LH + +LA P + Y N A D + YA+K Sbjct: 26 LHYRGNALHFCGRDVAELAAAFAEPVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMK 85 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 86 ANRFRPLLSELRRSPLFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPG 145 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 146 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGAAVTKFGIYAE 201 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ ++F+ + D + ++ I++GGG Sbjct: 202 QFGAALELAARHGLAVTWLHCHAGCGYLDAQLESFERVLDALDAFAARVPGLRGINLGGG 261 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG I +EPG F+ D G+LV +V ++ ++ Sbjct: 262 LGLPHRATDRPLDLERWRAAVHARFGGRPLAIAIEPGDFIAKDAGMLVLRVAYVELKRNR 321 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V G + G I E D + + Sbjct: 322 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPA--QSVCVAGNINEALDVWGNDVSLPP 379 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 380 VEPGDFIALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 419 >gi|254371951|ref|ZP_04987444.1| hypothetical protein FTCG_01087 [Francisella tularensis subsp. novicida GA99-3549] gi|151569682|gb|EDN35336.1| hypothetical protein FTCG_01087 [Francisella novicida GA99-3549] Length = 403 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 85/391 (21%), Positives = 156/391 (39%), Gaps = 9/391 (2%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +LE + + PF+ Y +E + + + YALKAN +IK Sbjct: 9 NLESICKESEAPFFYYDLDMLEAHAKELH----RLPVKLWYALKANPLSRIIKVFDEQKI 64 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S GEL + LA V + I+ +G K+ +++ L G+ F +ES ++LK L+ Sbjct: 65 SFDVASIGELDQVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQLKDLSIL 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST-LPGVKISG 195 + RV N + + G FG+ I+ + A + I G Sbjct: 125 VEKKNINVKVLLRVQLVWNDQENNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIG 184 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + I + + +++ + +++ ID+GGG+G+ Y++ + S + Sbjct: 185 MHCFQWGNILCLNKLSQIWEITTKALLDLSEAINVSLKVIDLGGGIGVPYNAGQKSISIN 244 Query: 255 DYASLIHQYFG-NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 D ++ + LE GR+ VA+ G+ VTK++ K + ++ D +R Sbjct: 245 DLIFCFNKLKKEFPYIEYWLELGRYAVAESGVYVTKIVDRKSVNNIDLLVTDGGAQHLVR 304 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P L ++ I GP+C + D + D L ++TGA Sbjct: 305 PALTGESFP-IQLLREEACSETNDFQIHGPLCTSLDKAGIASLPKDTGLNDYLIFKQTGA 363 Query: 374 YGAVQSGT-YNSRLLIPEIMVNGSQFHIIRP 403 YG +S + L E++ Q +R Sbjct: 364 YGFTESMPLFLCHNLPAEVIFYKGQLQTVRQ 394 >gi|83716834|ref|YP_440283.1| diaminopimelate decarboxylase [Burkholderia thailandensis E264] gi|83650659|gb|ABC34723.1| diaminopimelate decarboxylase, putative [Burkholderia thailandensis E264] Length = 907 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 89/400 (22%), Positives = 146/400 (36%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y + SLH + +LA P + Y N A D V YA+K Sbjct: 514 LHYRDNSLHFCGRRVAELAAAFAEPVFLYDPQRAVDNVARLQRALGDLQRGDFHVYYAMK 573 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 574 ANRFRPLLSELRRSPIFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPD 633 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 634 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGATITKFGIYAE 689 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ +F+ + D + ++ I++GGG Sbjct: 690 QFGAALELAARHGLTVTWLHCHAGCGYLDAQLDSFERVLDALDAFVARAPGLRGINLGGG 749 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG + +EPG F+ D G+LV +V ++ ++ Sbjct: 750 LGLPHRATDRPLDLERWRAAVHARFGGRPLALAIEPGDFIAKDAGMLVLRVAYVELKRNR 809 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V + G I E D + + Sbjct: 810 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRR--PGPTQSVCLAGNINEALDVWGDDVSLPP 867 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 868 VEPGDFVALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 907 >gi|307545925|ref|YP_003898404.1| diaminopimelate decarboxylase [Halomonas elongata DSM 2581] gi|307217949|emb|CBV43219.1| putative diaminopimelate decarboxylase [Halomonas elongata DSM 2581] Length = 420 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 86/396 (21%), Positives = 147/396 (37%), Gaps = 19/396 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + Y A+ A + YA+KANS A+I TLA + GL++ S GE+ Sbjct: 28 AFFYDLPALAAQGSAMKAALP-PGVELYYAIKANSEAAIIDTLAPVVDGLELSSGGEIE- 85 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A V SG GK ++ A+ G+ F+VES E+ L A SL + P+ Sbjct: 86 RACACSTPRPWVLSGPGKLDSDMRAAMTRGVEAFHVESLGEVARLQTIAASLDRVQPVLV 145 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+NP + + ++ FGI Q+ P + + G +H S Sbjct: 146 RINPSLPEDLSSRLRMAGTATPFGIDEAQLADAVRAVDDAPNLALVGFHVHAMSHQKCER 205 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHI---DVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + + R+ + + + +VGGG+G+ Y + Q Sbjct: 206 RHQRLLASYLERWPRWRALARHPEQVIQLNVGGGIGVNYLQPSEQFDWPGLCRALEQRLA 265 Query: 266 NLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + + E GRFL A G +VI K S + F++ + F P H + Sbjct: 266 AMHEPPLVRFEIGRFLSAFCGYYAIEVIDTKVSHGEGFLVCRGGTHQFRLPAAQGHDHPV 325 Query: 324 NYIVNPAG---DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA--VQ 378 ++ +VG +C D ++ +++ GDLL + GAYG Sbjct: 326 IHLPRTPRRALGGESRPWTVVGQLCTPKDVLSRRQELQGVEAGDLLVLPLAGAYGYNISH 385 Query: 379 SGTYNSRLLIPEIMVNGSQFHII------RPRMTFQ 408 + + ++ V S+ + R Sbjct: 386 A-DFLCHPRPDQVFVRESRESSVPETGGHRRAEPVD 420 >gi|114052146|ref|NP_001040457.1| ornithine decarboxylase [Bombyx mori] gi|95102974|gb|ABF51428.1| ornithine decarboxylase [Bombyx mori] Length = 444 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 78/375 (20%), Positives = 134/375 (35%), Gaps = 23/375 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + Y + ++ YA+K N ++ ++ TLA LG+G D S+ E+ Sbjct: 34 PFYVMDLGEVVARYQQWKELLPRVEP--FYAVKCNDDKLLLTTLAALGTGFDCASKAEIE 91 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + VP ERI+F+ K I A G+ +SE EL + Q I Sbjct: 92 LVTSLGVPPERIIFANPAKMASHIRYASAVGVDVMTFDSEIELMKIKQYMPHAQLLIRIR 151 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 KFG +++ G+ ++GV H+GS + Sbjct: 152 CDAASA----------QCPLGIKFGCDPVTEAPRLLKLASVLGLDVAGVSFHVGSGAAEA 201 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI-HQYFGN 266 F + +L R L R G + +D+GGG H ++ + +F Sbjct: 202 AVFGRGVQLARSLFSAARDLGLRPRLLDLGGGYPGIAAQHHFMLEIAEVVNAALESHFPE 261 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +++ EPGR+ A L V S ++ K D F+ +Y +++ + Y Sbjct: 262 RSVRVVAEPGRYFAAAAYTLAAMVHSKREIPAKEGEDADTHTMYFINDGVYGSFNCVLYD 321 Query: 327 VNPAGDRLHI-------HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + GP C+ D + + + GD L GAY + Sbjct: 322 HQIVSAEPLHDRADSVLPCSVWGPSCDALDCVMESALLPPLDAGDWLVFRDMGAYTIPIA 381 Query: 380 GTYNSRLLI---PEI 391 +N + + Sbjct: 382 SPFNGFPVPRVRAVV 396 >gi|257056451|ref|YP_003134283.1| ornithine decarboxylase [Saccharomonospora viridis DSM 43017] gi|256586323|gb|ACU97456.1| ornithine decarboxylase [Saccharomonospora viridis DSM 43017] Length = 389 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 82/385 (21%), Positives = 152/385 (39%), Gaps = 25/385 (6%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP + Y F+ AF D V YA+KAN + AV++ L G+ D+ S GE Sbjct: 18 PTPCLVVDIDTVIDRYSRFTEAFP--DAHVQYAVKANPHPAVVRALVDAGAAFDVASPGE 75 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + + A + + + K +I A +G+ + ++ S+L + + + G + Sbjct: 76 IDLCVEAGARPDTLSYGNTIKKPSDIAHAHAAGVREYTFDARSDLDNIAR--HAPGAQVS 133 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + V ++ T +KFG + A+ ++ GV H+GSQ Sbjct: 134 VRLLVEGGPDSVT-------PFGNKFGCNTDDAVRMLLRAAESG-LEPVGVSFHVGSQQL 185 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY-- 263 + ++ A + + +G ++ ++VGGG G+ Y P S YA I Sbjct: 186 EPAAWDLAVASAAKVFAGVAEHGVTLRRLNVGGGFGVDYIDT--APPMSAYADTILSAVR 243 Query: 264 -FGNLQCKIILEPGRFLVADVGILVTK--VISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 +++ EPGR LVA+ G++ ++ V++ K D+ + + Sbjct: 244 SHFPEPPELVCEPGRALVAEAGMIRSEVVVVARKHPTDEHRWVYLDIGRYNGLAETENEA 303 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKTGAYGAV 377 + + I GP C+ D + ++ L PGD + I +GAY A Sbjct: 304 IAYRLVPVGTHSQEDGPVIIAGPTCDGDDVLYQRTPYRLPLSLEPGDRIDILASGAYTAS 363 Query: 378 QSGT-YNSRLLIPEIMVNGSQFHII 401 S +N + ++ +I Sbjct: 364 YSSVAFNGIEPLRTYCISEG--RLI 386 >gi|217423075|ref|ZP_03454577.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 576] gi|217393983|gb|EEC34003.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 576] Length = 419 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 87/386 (22%), Positives = 143/386 (37%), Gaps = 10/386 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y +LH + +LA P + Y N A D + YA+K Sbjct: 26 LHYRGNALHFCGRDVAELAAAFAEPVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMK 85 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 86 ANRFRPLLSELRRSPLFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPG 145 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 146 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGAAVTKFGIYAE 201 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ ++F+ + D + ++ I++GGG Sbjct: 202 QFGAALELAARHGLAVTWLHCHAGCGYLDAQLESFERVLDALDAFAARVPGLRGINLGGG 261 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG+ I +EPG F+ D G+LV +V ++ ++ Sbjct: 262 LGLPHRATDRPLDLERWRAAVHARFGSRPLAIAIEPGDFIAKDAGMLVLRVAYVELKRNR 321 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V G + G I E D + + Sbjct: 322 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPA--QSVCVAGNINEALDVWGNDVSLPP 379 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSR 385 PGD + + G Y + S + R Sbjct: 380 VEPGDFIALLNAGGYASSMSSNHCLR 405 >gi|71064610|ref|YP_263337.1| ornithine decarboxylase [Psychrobacter arcticus 273-4] gi|71037595|gb|AAZ17903.1| ornithine decarboxylase [Psychrobacter arcticus 273-4] Length = 391 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 91/379 (24%), Positives = 144/379 (37%), Gaps = 23/379 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPF I+ Y F + + YA+KA+ VI LA LGS D S EL Sbjct: 25 TPFLVVDLNRIKIKYHEMVGFFP--NAKIHYAMKASPAVEVINLLAELGSNFDCASIYEL 82 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R L V A RI + K + + A GI + +SE++LK + + A I Sbjct: 83 DRVLDCGVEASRISYGNTIKKPEHVKYAFDKGIDLYATDSEADLKNIAKHAPGSKIFVRI 142 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + + KFG + L A L V G+ H+GSQ Sbjct: 143 LVQ---------GSETAEWPLSRKFGCHPNMAIELLIQAQELGLV-PYGISFHVGSQQKD 192 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY----ASLIHQ 262 + ++ A ++ + +++ + GG A + P + L Sbjct: 193 VAAWDDALAKVKYMFDWMKNEEGIKLQMINLGGGFPANYLSEVNPIKVYAEEIKSYLSDD 252 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---KTFVILDVAMNDFMRPTLYDA 319 Y +IILEPGR LV G+LV+ V+ I + + +V DV + + TL +A Sbjct: 253 YSAEDMPEIILEPGRSLVGGSGVLVSDVVLISRKSHTDLTRWVYTDVGLFQGLIETLGEA 312 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIA-LPRPGDLLYIEKTGAYGA 376 Y + GP C++ D + ++ GD ++ TGAY Sbjct: 313 IKYPVYTPKMETSTSAGTVVLAGPTCDSTDIMYEEAGYQLPEELEIGDKIFWLTTGAYTN 372 Query: 377 VQSG-TYNSRLLIPEIMVN 394 S +N + + VN Sbjct: 373 SYSSIEFNGFPPLEVVYVN 391 >gi|154308241|ref|XP_001553457.1| hypothetical protein BC1G_07866 [Botryotinia fuckeliana B05.10] gi|150852951|gb|EDN28143.1| hypothetical protein BC1G_07866 [Botryotinia fuckeliana B05.10] Length = 441 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 81/375 (21%), Positives = 134/375 (35%), Gaps = 36/375 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + ++ + + YA+K N + VI+ LA LG+G D S+GE+ + Sbjct: 64 FFVVDLGEVYRQHMRWKKNLPRVKP--FYAVKCNPDPQVIRLLAELGTGFDCASKGEIEQ 121 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L + I+++ KT I A GI ++ EL + + I Sbjct: 122 VLKMGIDPNYIIYAQPCKTSSYIRYAADQGIKQMTFDNGDELYKIKKLFPDAELFLRI-- 179 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +T S KFG ++ + L A A +L + I GV H+GS Sbjct: 180 --------STDDSSSLSPLSLKFGAAMNATNDLLALAKSLG-LNIVGVSFHVGSGASDPL 230 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + + +Q ++G+++ +D+GGG S F Sbjct: 231 AFRKAVQDAHSVFEQALTHGYHLHTLDIGGGFCTEIFELMTDTLSKAL-----DEFMPSH 285 Query: 269 CKIILEPGRFLVADVGILVTKVI--------------SIKKSADKTFVILDVAMNDFMRP 314 II EPGR+ V+ L +I + D + + D P Sbjct: 286 INIIGEPGRYYVSKAFTLACNIIARRTIKDPVSSDKSYMLYLNDGLYGNFSGIVFDHRNP 345 Query: 315 TLYDAYHEINYIVNPAGDRLHIH---ADIVGPICETGDFIALN-RKIALPRPGDLLYIEK 370 + ++ + I GP C+ D I+ N GD LY E Sbjct: 346 VARVLRAGSFTCFDSLTNQETVDGIQYSIWGPTCDGIDRISANICFDHNLDVGDWLYFED 405 Query: 371 TGAYGAVQSGTYNSR 385 GAY +N Sbjct: 406 MGAYTKCCVTRFNGF 420 >gi|225445352|ref|XP_002281621.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 412 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 129/363 (35%), Gaps = 16/363 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY A+ + + A + + YA+K N +I LA LG+ D S E+ Sbjct: 45 PFYILDLGAVVRLMDMWKQALP--NVVPYYAVKCNCQPPLITALASLGANFDCASRAEIE 102 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 +A V A++IV++ K + A G+ +S E+ + I Sbjct: 103 TVMALGVGAQQIVYANPCKGESHLKYAASVGVNLTTFDSMQEIDKIIMWHKKCDLLLRIK 162 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 A +K S KFG ++ L +A+ G+++ GV H+GS+++ Sbjct: 163 --------APNDEKGSWRSLGSKFGALREEVVPLLQHAN-AAGLRVIGVSFHVGSKVNDP 213 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG--LGIAYHSDHRPPSSSDYASLIHQYFG 265 + + A R + H+ GG + Sbjct: 214 QVYRGAIASARGVFDAAAQLKLPPMHVLDIGGGFQESPTFHEIAAVIKEAINDYFPSSET 273 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + KI+ EPGRF LV+ +I + +K +D + YD + Sbjct: 274 SEDLKIMAEPGRFFAETAFTLVSNIIGKRVRGEKREYWIDDGIYGSFNLPAYDKSSMMVK 333 Query: 326 I---VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + ++ + + GP C++ D + ++ D+L GAY A + Sbjct: 334 PLLGGSEWMNKAKFSSTVFGPTCDSMDMVVAESQLPELHMNDVLVFYNMGAYTASAGTRF 393 Query: 383 NSR 385 N Sbjct: 394 NGF 396 >gi|283767867|ref|ZP_06340782.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus H19] gi|283461746|gb|EFC08830.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus H19] Length = 400 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 88/371 (23%), Positives = 147/371 (39%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 L + + ++HI++GGG+G Y ++ + Sbjct: 198 HVDVVTLYFKKAKAWSEKHQFPLKHINLGGGIGFNYADLTSQFEWDNFVENFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + E GRF+VA +G VT+V+ IKK + IL F P + H + Sbjct: 258 MGDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|145593239|ref|YP_001157536.1| Orn/DAP/Arg decarboxylase 2 [Salinispora tropica CNB-440] gi|145302576|gb|ABP53158.1| diaminopimelate decarboxylase [Salinispora tropica CNB-440] Length = 416 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 93/399 (23%), Positives = 162/399 (40%), Gaps = 22/399 (5%) Query: 19 EKLAHVV------QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 +LA + QTP Y Y + ++ A T + Y+LKAN + V+ L Sbjct: 2 SELAELFNRPDAPQTPAYFYDLDELTRSNAALRAALPR-PTELFYSLKANPHPTVVAELT 60 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G ++ S GELR ALAA +++++G GK ++ A+++G+ F+V+S L Sbjct: 61 AAGCRAEVCSPGELRVALAAGCDPAQVLYTGPGKRDIDLAEAVRAGVELFSVDSPYGLDQ 120 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L++ A + R+N D A TG +FG + + V Sbjct: 121 LDRMAREHDVEVRALVRINDDTPAPGQGLTMTGVAS-QFGADVRWVLDQPDLFGPRRNVC 179 Query: 193 ISGVDMHIGSQIDQIES-FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 G +++GS +D ++ + + + + + + + G + ID+GGG G + P Sbjct: 180 PVGFHLYMGSNVDGEDALIAQFTQSVDTIRRLVAATGRQPELIDLGGGFGAPFARAGARP 239 Query: 252 SSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 A + + E GR+LV G LVT+V+ +K+S V+L Sbjct: 240 DLPKLADRLAALLADAFPGWPEQGPAVAFESGRYLVGTCGTLVTRVLEVKRSQGIPVVVL 299 Query: 305 DVAMNDFMRPTLYDAYHEINYI--VNPAGDRLHIHADIV-GPICETGDFIALNRKIALPR 361 + ++ + I A I IV GP+C D A + Sbjct: 300 ESGIHHLGGMSGLRRLPPIVPDLLTVDAAAGPPIPGTIVTGPLCTPLDTWARATALPPLV 359 Query: 362 PGDLLYIEKTGAYGAVQSG--TYNSRLLIPEIMVNGSQF 398 PG L+ + GAYG + + + + E+ + G Q Sbjct: 360 PGQLVAVPNVGAYGL-YASLVAFLAHPMPIEVTIAGGQV 397 >gi|49482366|ref|YP_039590.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus MRSA252] gi|221142240|ref|ZP_03566733.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|257424263|ref|ZP_05600692.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257426939|ref|ZP_05603341.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257429577|ref|ZP_05605964.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 68-397] gi|257432224|ref|ZP_05608587.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus E1410] gi|257435183|ref|ZP_05611234.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus M876] gi|282902714|ref|ZP_06310607.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus C160] gi|282907116|ref|ZP_06314964.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282912362|ref|ZP_06320158.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus WBG10049] gi|282912980|ref|ZP_06320772.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus M899] gi|282921396|ref|ZP_06329114.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C427] gi|282922607|ref|ZP_06330297.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus C101] gi|283959571|ref|ZP_06377012.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus A017934/97] gi|293498035|ref|ZP_06665889.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus 58-424] gi|293511624|ref|ZP_06670318.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus M809] gi|293550233|ref|ZP_06672905.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus M1015] gi|295426669|ref|ZP_06819308.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589130|ref|ZP_06947771.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MN8] gi|49240495|emb|CAG39152.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus MRSA252] gi|257273281|gb|EEV05383.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257276570|gb|EEV08021.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257280058|gb|EEV10645.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus 68-397] gi|257283103|gb|EEV13235.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus E1410] gi|257285779|gb|EEV15895.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus M876] gi|269939651|emb|CBI48019.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus TW20] gi|282314828|gb|EFB45214.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus C101] gi|282315811|gb|EFB46195.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus C427] gi|282323080|gb|EFB53399.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus M899] gi|282324058|gb|EFB54374.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus WBG10049] gi|282330015|gb|EFB59536.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282597173|gb|EFC02132.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus C160] gi|283789163|gb|EFC27990.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus A017934/97] gi|290919280|gb|EFD96356.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus M1015] gi|291096966|gb|EFE27224.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus 58-424] gi|291465582|gb|EFF08114.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus M809] gi|295129121|gb|EFG58748.1| siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus aureus subsp. aureus EMRSA16] gi|297577641|gb|EFH96354.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MN8] gi|302750005|gb|ADL64182.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|312436765|gb|ADQ75836.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus TCH60] gi|315194579|gb|EFU24968.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus CGS00] gi|329312822|gb|AEB87235.1| Pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus T0131] Length = 400 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 88/371 (23%), Positives = 149/371 (40%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-VFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK + IL F P + H + Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREIQIEAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|297528776|ref|YP_003670051.1| Orn/DAP/Arg decarboxylase 2 [Geobacillus sp. C56-T3] gi|297252028|gb|ADI25474.1| Orn/DAP/Arg decarboxylase 2 [Geobacillus sp. C56-T3] Length = 401 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 85/381 (22%), Positives = 148/381 (38%), Gaps = 18/381 (4%) Query: 22 AHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 A P Y Y + + + S + + YA+KAN+++ ++KT+A +G + Sbjct: 16 AKQQG-PLCAYVYDLDNLRVHTASLSASLP-PSVRLFYAVKANADERILKTVAPYVTGFE 73 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 + S GEL++ ++F G GKT +E+ A++ + +VES EL+ LN A Sbjct: 74 VASGGELQKVRRLFAD-SPVIFGGPGKTDEELTAAIEERVALIHVESVWELQRLNWIAAR 132 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + RVN A+ K +FGI I A TLP + + G H Sbjct: 133 RQTTVRVLLRVNLRQAASGATLHMA-GKPTQFGIDEQHIAEAIHTALTLPSIDLQGFHFH 191 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 S ++ + Q + ++VGGG+G+ Y+ R + ++ Sbjct: 192 SMSNHTDEQAHLSFIETCLSFVAQAETTYGRRFSVVNVGGGVGVHYNEPDRQFRWNWFSK 251 Query: 259 LIH---QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 ++ + +I E GRF+ A G +V+ +K + F I+ + P Sbjct: 252 ELNLLLRRQAPPHWTVIFELGRFIAAHNGYYAAEVLDLKTNYGTHFAIIRGGTHHLRLPA 311 Query: 316 LYDAYHEINYIVNPAGDRL-------HIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 + H I + + G +C D +A + A R GD++ Sbjct: 312 AWKMNHPFLVIPIDEWPYPFNRPSLHNQRVTLAGELCTPNDILARDVPCARLRVGDIVLF 371 Query: 369 EKTGAYGAVQSGT-YNSRLLI 388 GAYG S + S Sbjct: 372 RCAGAYGWDISHHDFLSHPHP 392 >gi|146305836|ref|YP_001186301.1| ornithine decarboxylase [Pseudomonas mendocina ymp] gi|145574037|gb|ABP83569.1| ornithine decarboxylase [Pseudomonas mendocina ymp] Length = 387 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 93/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF I Y N F + YA+KAN +I+ L GS DI Sbjct: 21 ADQHETPFVVIDRQIISDAYDQLGNCFPF--AKIYYAVKANPAVEIIELLRDKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + +A V ERI + K +I G+ F +S E N + G Sbjct: 79 SIYELDKVMATGVGPERISYGNTIKKSRDIRYFFDKGVRLFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + +A KFG L A L V G+ H+G Sbjct: 137 SKIYVRILTEGSTSA-------DWPLSRKFGCQPDMALDLLILAKQLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I+ + A ++ + ++LR +Q I++GGG Y + + Sbjct: 189 SQQRDIDVWDAAIAKVKVIFERLREEDGITLQMINMGGGFPANYIQRTNDLETYAEEITR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ G+LV++V+ + + + A + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLIANAGVLVSEVVLVARKSRTAVERWVYADVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + + K + L GD LY TGAY Sbjct: 309 MDESIKFPIWTEKKGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLASGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|89053292|ref|YP_508743.1| ornithine decarboxylase [Jannaschia sp. CCS1] gi|88862841|gb|ABD53718.1| ornithine decarboxylase [Jannaschia sp. CCS1] Length = 389 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 77/376 (20%), Positives = 135/376 (35%), Gaps = 19/376 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 P + ++Y S + YA+KAN ++ L +GSG D S+ Sbjct: 27 TFDRPTLILDVDRVAQHYDALSAGLGQ--AHIHYAVKANPAPEILARLVTMGSGFDAASK 84 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E++ L A I F K +I A G+ F ++ EL + A Sbjct: 85 VEIQMCLDAGAAPSHISFGNTVKKPSDIAYAHSVGVDVFAADASEELDKIATHAPGAQVY 144 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + + KFG L A+A L ++ G+ H+GSQ Sbjct: 145 IRLLVEASGA----------DWPLTRKFGTTKANALDLMAHARALG-LRPVGLSFHVGSQ 193 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + D+ ++ G + +++GGG Y D P++ + + Sbjct: 194 TRDPAMWGPVLDGIADVWTTAKTLGFPLDLLNIGGGFPAFYGDDIPHPTAYAANVMAQVH 253 Query: 264 FGNLQCKII-LEPGRFLVADVGILVTKV-ISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 I EPGR LVA+ G++ +V + +KS D + + + F Sbjct: 254 TRFGDVPRIMAEPGRGLVAEAGMIAAEVLLVARKSPDDLHRWVYLDIGKFSGLAETIDEA 313 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQ 378 + GP C++ D + R IALP + GD ++I GAY Sbjct: 314 IRYQFATDRDHEAMGPCILAGPSCDSADVLYEKRPIALPLGLKSGDRIWIRNCGAYTTTY 373 Query: 379 SG-TYNSRLLIPEIMV 393 + +N + +++ Sbjct: 374 ASIGFNGFPPLDVVVL 389 >gi|298693389|gb|ADI96611.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ED133] Length = 400 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 88/371 (23%), Positives = 149/371 (40%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 L + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVTLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK + IL F P + H + Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|282915455|ref|ZP_06323227.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus D139] gi|282320558|gb|EFB50896.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus D139] Length = 400 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 88/371 (23%), Positives = 148/371 (39%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 L + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVTLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + E GRF+VA +G VT+V+ IKK + IL F P + H + Sbjct: 258 MGDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|167905336|ref|ZP_02492541.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei NCTC 13177] Length = 419 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 88/400 (22%), Positives = 148/400 (37%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y +LH + +LA P + Y N A D + YA+K Sbjct: 26 LHYRGNALHFCGRDVAELAAAFAEPVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMK 85 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 86 ANRFRPLLSELRRSPLFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPG 145 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 146 VHVNCDTLSAIALLG----SRSPGREIGIRVNPSVGIGYGDSERLSYAGAAVTKFGIYAE 201 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ ++F+ + D ++ ++ I++GGG Sbjct: 202 QFGAALELAARHGLAVTWLHCHAGCGYLDAQLESFERVLDALDAFAAHVPGLRGINLGGG 261 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG + +EPG F+ D G+LV +V ++ ++ Sbjct: 262 LGLPHRATDRPLDLERWRAAVHARFGGRPLALAIEPGDFIAKDAGMLVLRVAYVELKRNR 321 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V G + G I E D + + Sbjct: 322 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPA--QSVCVAGNINEALDVWGNDVSLPP 379 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 380 VEPGDFIALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 419 >gi|53803251|ref|YP_114999.1| carboxynorspermidine decarboxylase [Methylococcus capsulatus str. Bath] gi|53757012|gb|AAU91303.1| carboxynorspermidine decarboxylase [Methylococcus capsulatus str. Bath] Length = 375 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 76/374 (20%), Positives = 137/374 (36%), Gaps = 22/374 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP + Y TAI++ TF A G + Y++K+ +++ +A GL S E Sbjct: 4 TPAFVYDQTAIDRTLSTFEEAAAGSGPRLLYSVKSFPFLPLLRRIAPRVDGLSASSLFEA 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R A + + G EID + + S + L+ ++ + + A + Sbjct: 64 RLCAEALAGRGGLHITTPGFRPGEIDEIGR----LCDFVSFNSLEQFDRWSARMEGTASV 119 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 RVNP ++ + + K G+P+ ++ ++ + Sbjct: 120 GLRVNPQLSFAPDPRYDPCRPHSKLGVPL-------DRLVPAEVGRLERLEGIHFHTVFD 172 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 SF ++L L +L ++ +++GGG + A + + Sbjct: 173 CASFEPLAEILAKLENKLGERLKRLRWLNLGGGYRLEGD-------LGRLAGFSTRLQRD 225 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ EPG+ ++ G LV VI + S KT +LD ++N Y Sbjct: 226 YGLEVYFEPGKAVIGSAGYLVASVIDVFNSGGKTVAVLDSSINHHPEVFEYQRSPR---- 281 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + + A + G C GD PR GD L E GAY V++ +N Sbjct: 282 LAEVCEEGRETAILAGGTCLAGDLFGEYALPTRPRIGDRLVFEDVGAYTLVKANRFNGHN 341 Query: 387 LIPEIMVNGSQFHI 400 L +G H+ Sbjct: 342 LPSIYRWDGEALHL 355 >gi|78048867|ref|YP_365042.1| putative diaminopimelate decarboxylase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037297|emb|CAJ25042.1| putative diaminopimelate decarboxylase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 429 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 84/394 (21%), Positives = 145/394 (36%), Gaps = 13/394 (3%) Query: 11 LHAENVSL----EKLAHVVQTP--FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 LH + ++L ++ + P Y Y A++ + + YA KAN+ Sbjct: 3 LHIDTIALLAALPQVRDRCEGPICAYVYDLAALDTHAAWMRAQLP-AQCELFYAAKANAE 61 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +++TLA G + S GEL A P ++F G GK E+ A +V Sbjct: 62 PPILQTLAAHVDGFEAASGGELAWL-HAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHV 120 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ES SEL+ L A G+ P+ R+N + ++ G + FG+ + + Sbjct: 121 ESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLMMGGQPSPFGLDPSDLDAAVRR 180 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIA 243 P +++ G H+ S + QQ R ++ GGG G+ Sbjct: 181 VQANPSLRLEGFHFHLMSHQRSAAAQLHLVAAYLHTVQQWRQTYALGPLRVNAGGGFGVD 240 Query: 244 YHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 Y + + + + ++ LEPGR+L A G + +V+ +K+S F Sbjct: 241 YLAPDASFDWARFCAGLPAVLREHGTDLRLRLEPGRYLSASCGWYLMEVLDLKRSHGAWF 300 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIALNRKIALP 360 + + F P H + +VG +C D +A + +A Sbjct: 301 AVARGGTHHFRTPAAQAHDHPFRVLRGERAPVLRDTPVTLVGQLCTPKDVLARQQPVAAL 360 Query: 361 RPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 PGD L GAY S + + + Sbjct: 361 APGDCLAFPLAGAYAWNISHQHFLMHPAPQMVFL 394 >gi|330501823|ref|YP_004378692.1| ornithine decarboxylase [Pseudomonas mendocina NK-01] gi|328916109|gb|AEB56940.1| ornithine decarboxylase [Pseudomonas mendocina NK-01] Length = 387 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 94/373 (25%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF I Y N F V YA+KAN +I+ L GS DI Sbjct: 21 ADQHETPFVVIDRQIIADAYDQLGNCFPF--AKVYYAVKANPATEIIELLRDKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + +A V ERI + K +I G+ F +S E N + G Sbjct: 79 SIYELDKVMATGVGPERISYGNTIKKSRDIRYFFDKGVRLFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + +A KFG L A L V G+ H+G Sbjct: 137 SKIYVRILTEGSNSA-------DWPLSRKFGCQPDMALDLLILAKQLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I+ + A ++ + ++L+ +Q I++GGG Y + + Sbjct: 189 SQQRDIDVWDAAIAKVKVIFERLKEEDGITLQMINMGGGFPANYIQRTNDLETYAEEITR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ G+LV++V+ + + + A + Sbjct: 249 FLKEDFGDELPEIILEPGRSLIANAGVLVSEVVLVARKSRTAVERWVYADVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD LY TGAY Sbjct: 309 MDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLASGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|167617008|ref|ZP_02385639.1| diaminopimelate decarboxylase, putative [Burkholderia thailandensis Bt4] gi|257140913|ref|ZP_05589175.1| diaminopimelate decarboxylase, putative [Burkholderia thailandensis E264] Length = 420 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 89/400 (22%), Positives = 146/400 (36%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y + SLH + +LA P + Y N A D V YA+K Sbjct: 27 LHYRDNSLHFCGRRVAELAAAFAEPVFLYDPQRAVDNVARLQRALGDLQRGDFHVYYAMK 86 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 87 ANRFRPLLSELRRSPIFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPD 146 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 147 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGATITKFGIYAE 202 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ +F+ + D + ++ I++GGG Sbjct: 203 QFGAALELAARHGLTVTWLHCHAGCGYLDAQLDSFERVLDALDAFVARAPGLRGINLGGG 262 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG + +EPG F+ D G+LV +V ++ ++ Sbjct: 263 LGLPHRATDRPLDLERWRAAVHARFGGRPLALAIEPGDFIAKDAGMLVLRVAYVELKRNR 322 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V + G I E D + + Sbjct: 323 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRR--PGPTQSVCLAGNINEALDVWGDDVSLPP 380 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 381 VEPGDFVALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 420 >gi|77919691|ref|YP_357506.1| carboxynorspermidine decarboxylase [Pelobacter carbinolicus DSM 2380] gi|77545774|gb|ABA89336.1| carboxynorspermidine decarboxylase [Pelobacter carbinolicus DSM 2380] Length = 397 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 119/398 (29%), Gaps = 23/398 (5%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + + K+ + +P Y + N + ALKA + + Sbjct: 16 GIDIPKILELAPSPAYVVDLGRLRHNLEILDQVQKRSGAKILLALKAFALWKTFPLIRQT 75 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+ S E R E F+ K D ++L S FN ++ E Sbjct: 76 LHGVCASSPWEARLGREEFGR-EVHSFAAAFKESDVVELLGISNHLVFNSFAQLERFRP- 133 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + I R+NP+ + + GIP + + G+ Sbjct: 134 -LWEKEKGRVSIGLRINPEHSEGHTALYDPCAPGSRLGIP--RAEFEGKSLDGVEGLHFH 190 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + + + ++ S ++ + GGG +H Sbjct: 191 TLCEQLY---------EPLARTAAVVEEKFGSFLPQMKWFNFGGG----HHITREGYDID 237 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 LI + G ++ LEPG + G+LV++V+ + ++ + P Sbjct: 238 SLVELIKYFQGKYGVQVYLEPGEAIAIGTGLLVSEVLDVVH--NRVDTAILDVSATCHMP 295 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + + + GP C GD I G L Y Sbjct: 296 DVLEMPYRPDIYGGFDAGAKPCTYRLGGPSCLAGDVIGDWSFEEPLHAGQRLAFLDMAHY 355 Query: 375 GAVQSGTYNSRLLIPEIMV--NGSQFHIIRPRMTFQEL 410 V++ T+N + + ++R +++ Sbjct: 356 TMVKTTTFNGIHHPSICTYEPDTGELEVLRH-FDYEDF 392 >gi|323440347|gb|EGA98060.1| diaminopimelate decarboxylase protein [Staphylococcus aureus O11] gi|323443170|gb|EGB00789.1| diaminopimelate decarboxylase protein [Staphylococcus aureus O46] Length = 400 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 88/371 (23%), Positives = 149/371 (40%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-NNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEATLAMPNIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK + IL F P + H + Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|149921405|ref|ZP_01909858.1| putative lysine/ornithine decarboxylase [Plesiocystis pacifica SIR-1] gi|149817725|gb|EDM77190.1| putative lysine/ornithine decarboxylase [Plesiocystis pacifica SIR-1] Length = 430 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 93/364 (25%), Positives = 154/364 (42%), Gaps = 18/364 (4%) Query: 33 STTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAA 92 +E Y AF DT+ A+KAN A+++ L G+GL+ S E++ ALAA Sbjct: 45 DLDRLEARYADLCAAFP-PDTLHAVAIKANPVVALLEVLVDAGAGLEAASWEEVQLALAA 103 Query: 93 PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 P+ER+VF KT E+ +L+ G++ + + A +A + RVNP Sbjct: 104 GCPSERVVFDSPAKTDAELAASLELGLWLNVDHPDELRRIEALLAERPPTRARVGLRVNP 163 Query: 153 DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK 212 + + + ST K KFG+P+ +L + G+ + +G + Q + Sbjct: 164 QLGSGAIEFTSTISKASKFGVPLTDAPALVRRFPFITGLHVHTGSQGVGLPLLQAAARAT 223 Query: 213 AFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS-DYASLIHQYFGNLQCKI 271 A + + +DVGGG+ + Y P S D+ + G Q ++ Sbjct: 224 A----------EVAEALALDWLDVGGGVPVRYTDADPEPPSYADWGRALADIPGWGQRRL 273 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 + E GR + A G V+ V ++K K +I+ + + MR + +IV Sbjct: 274 VTEVGRSIHAGCGWAVSTVEAVKDVDGKPTLIIHLGADFLMRRVYRPQDWDHEFIVLDPE 333 Query: 332 DRLHIH------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 R H + I GP+C +GD ++ R + GD L + GAY + SR Sbjct: 334 GRPRAHGEGARESQIAGPLCFSGDMLSRGRSLPPAARGDWLLVRDCGAYTLGMWSRHCSR 393 Query: 386 LLIP 389 L P Sbjct: 394 GLPP 397 >gi|160932661|ref|ZP_02080051.1| hypothetical protein CLOLEP_01503 [Clostridium leptum DSM 753] gi|156868620|gb|EDO61992.1| hypothetical protein CLOLEP_01503 [Clostridium leptum DSM 753] Length = 376 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 120/386 (31%), Gaps = 24/386 (6%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP Y +E+N + D + A KA S A + +G E Sbjct: 9 QTPCYVVDEALLERNLVILKQVIDRTGCKILLAQKAFSMFACYPLIGSYLNGTTASGLFE 68 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 R + E +FS + + ++ FN S+ E L Sbjct: 69 ARLGKE-EMGGETHIFSPAYREDEIDEILSLCDHVIFNSFSQWEKYKAK----VLASGKS 123 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP+ + H + GI + + + + Sbjct: 124 AGLRLNPEHSTQDHAIYDPCSPGSRLGITLKKFRP-----------DLLDGIEGLHFHTL 172 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + + + ++ ++ ++ GGG I S + + Sbjct: 173 CEQDAAPLVETVAVVEEKFGPWLSQMKWLNFGGGHHITRPG----YDIDALVSCVSRVQE 228 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + + G LV+ V+ + +++ +LD + M L Y Sbjct: 229 RYGVQVYLEPGEAVALNAGFLVSTVLDVLENSG-NIAVLDTSAACHMPDVLEMPYRPPIA 287 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 G++ + GP C GD I PG + Y V++ T+N Sbjct: 288 GGGGLGEKA-YDYRLGGPTCLAGDVIGDYSFDEPLSPGSRVVFCDMAIYSMVKNNTFNGM 346 Query: 386 LLIPEIMVN-GSQFHIIRPRMTFQEL 410 L + ++R +++ Sbjct: 347 NLPAIYLKKQDGSIQLVRK-FGYEDF 371 >gi|302331871|gb|ADL22064.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus JKD6159] Length = 400 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 148/371 (39%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A P I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPTNHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDEVIEAALAMPKIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKAWSEKYRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK D + IL F P + H Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHDAWYAILRGGTQQFRLPVSWQHNHPFEI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|167722329|ref|ZP_02405565.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei DM98] Length = 419 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 89/400 (22%), Positives = 148/400 (37%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM---DTMVCYALK 60 Y +LH + +LA P + Y N A + D + YA+K Sbjct: 26 LHYRGNALHFCGRDVAELAAAFAEPVFLYDPQRALDNVARLQRALGDLQHGDFRLHYAMK 85 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 86 ANRFRPLLSELRRSPLFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPG 145 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 146 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGAAVTKFGIYAE 201 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ ++F+ + D + ++ I++GGG Sbjct: 202 QFGAALELAARHGLAVTWLHCHAGCGYLDAQLESFERVLDALDAFAARVPGLRGINLGGG 261 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG I +EPG F+ D G+LV +V ++ ++ Sbjct: 262 LGLPHRATDRPLDLERWRAAVHARFGGRPLAIAIEPGDFIAKDAGMLVLRVAYVELKRNR 321 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V G + G I E D + + Sbjct: 322 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPA--QSVCVAGNINEALDVWGNDVSLPP 379 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 380 VEPGDFIALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 419 >gi|332995687|gb|AEF05742.1| Orn/DAP/Arg decarboxylase 2 [Alteromonas sp. SN2] Length = 407 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 103/398 (25%), Positives = 164/398 (41%), Gaps = 16/398 (4%) Query: 8 EGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 L + ++ ++ +P Y Y I + + YA+KAN A Sbjct: 14 NNQLVFAGKTASEIINIAGDSPCYIYDRHMISRTIEQVKRLLP-NRVHLHYAVKANPMSA 72 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 ++ +A +GLD+ S EL AL++ +PA ++ +G GK+ E+ AL +G+ Sbjct: 73 LVSHIASQVNGLDVASHKELMIALSSGMPANKVSLAGPGKSDKELVAALTAGVVINVESE 132 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 EL ++ A +GKKA IA RVNP + TG + FG+ ++ L + Sbjct: 133 S-ELARVSVHAKEIGKKANIALRVNPAFHIRGAGMKMTGGAK-PFGVDSEKVPKLIQSIN 190 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 G + GSQI E ++ L +L + I GG + Sbjct: 191 -REYCHFVGFHIFCGSQILSAELLSDVYQRTISLAVELSNAAKVIPKQINIGGGFGVTYF 249 Query: 247 DHRPP------SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 H P S+ + + + LE GR+LVA G+ +TKVI K S +K Sbjct: 250 QHEKPLDIARVCSNLAIYIDKLPPAFTKTEFHLELGRYLVAQAGLYLTKVIDKKVSREKK 309 Query: 301 FVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 F++ D M+ + I N + +IVGP+C D IA N Sbjct: 310 FLVCDGGMHHHLANSGNFGQVIRKNYPVLIANKVDSKFKEEVNIVGPLCTPLDIIATNIN 369 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 I GD + I +GAYGA S + SR + E+++ Sbjct: 370 IPSANVGDHIAILMSGAYGATASPQSFLSREQVTELLL 407 >gi|217977341|ref|YP_002361488.1| Orn/DAP/Arg decarboxylase 2 [Methylocella silvestris BL2] gi|217502717|gb|ACK50126.1| Orn/DAP/Arg decarboxylase 2 [Methylocella silvestris BL2] Length = 376 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 152/373 (40%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + +NY++F++A DT V YA+KAN + V++ LA LGS D S E+ Sbjct: 17 PCLVLDLDVVRENYVSFASAMP--DTRVYYAVKANPDPRVLELLAKLGSCFDTASVVEVE 74 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALA+ A+RI F K +I A + G+ F V+ E+E++ + + A + Sbjct: 75 AALASGATADRISFGNTIKKERDIKRAYELGVRLFAVDCEAEVEKIARAAPGSKVFCRLL 134 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 K + KFG + + +A L V G+ H+GSQ Sbjct: 135 CD----------GKGAEWPLSRKFGCDVDLAPRVLEHAHRLGLV-AYGLSFHVGSQQRNP 183 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR--PPSSSDYASLIHQYFG 265 + A K + L G +Q +++GGG Y + + + ++FG Sbjct: 184 AMWDGALKAASAIFNDLGERGIALQMVNLGGGFPTRYLKEVPAVRAYAQSIMQSLRKHFG 243 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ +V+ I + +D V I Y Sbjct: 244 NHIPETIIEPGRGMVGNAGVIEAEVVLISRKSDDDVVKWVYLDIGKFNGLAETMDEMIRY 303 Query: 326 IVNPAGDR-LHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 + + D + GP C++ D + + + G + IE TGAY S Sbjct: 304 PIRTSFDGDETEPCVLAGPSCDSVDVLYEKDPYHLPVSLEIGAKVLIEGTGAYTTTYSSV 363 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 364 GFNGFPPLKSYVI 376 >gi|167826885|ref|ZP_02458356.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei 9] gi|226194830|ref|ZP_03790422.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei Pakistan 9] gi|225933174|gb|EEH29169.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei Pakistan 9] Length = 419 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 89/400 (22%), Positives = 147/400 (36%), Gaps = 10/400 (2%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF---DGMDTMVCYALK 60 Y +LH + +LA P + Y N A D + YA+K Sbjct: 26 LHYRGNALHFCGRDVAELAAAFAEPVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMK 85 Query: 61 ANSNQAVIKTLAHL-GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 AN + ++ L G+D S ELR ALA ERI ++ G DE L Sbjct: 86 ANRFRPLLSELRRSPLFGIDACSPEELREALACGFAPERISYTAHGMMPDEAALLAALPG 145 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 N ++ S + L S I RVNP + Sbjct: 146 VHVNCDTLSAIALLG----SRSPGREIGIRVNPGVGIGYGDSERLSYAGAAVTKFGIYAE 201 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A ++ +H + +++ ++F+ + D + ++ I++GGG Sbjct: 202 QFGAALELAARHGLAVTWLHCHAGCGYLDAQLESFERVLDALDAFAARVPGLRGINLGGG 261 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 LG+ + + RP + + +H FG I +EPG F+ D G+LV +V ++ ++ Sbjct: 262 LGLPHRATDRPLDLERWRAAVHARFGGRPLAIAIEPGDFIAKDAGMLVLRVAYVELKRNR 321 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 FV L+ N + P YD E V G + G I E D + + Sbjct: 322 RFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPA--QSVCVAGNINEALDVWCNDVSLPP 379 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 PGD + + G Y + S + R E+ + + H Sbjct: 380 VEPGDFIALLNAGGYASSMSSNHCLRGQFRELALFDAAPH 419 >gi|150019219|ref|YP_001311473.1| carboxynorspermidine decarboxylase [Clostridium beijerinckii NCIMB 8052] gi|149905684|gb|ABR36517.1| carboxynorspermidine decarboxylase [Clostridium beijerinckii NCIMB 8052] Length = 379 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 63/396 (15%), Positives = 127/396 (32%), Gaps = 23/396 (5%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 ++ L KL +P Y ++KN T + A KA S + + Sbjct: 3 DIDLSKL----PSPCYLVDERLLKKNLETLDYVQKETGANIILATKAFSMYSTFPLIGRY 58 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+ S E R + E ++S + + ++ S FN S+ + Sbjct: 59 LKGVTSSSLHEARLGYE-EMGKEVHIYSPAYREDEFDEIMKYSDHIVFNSFSQWRKYK-D 116 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + GKK A R+NP+ + + + + G+ + Sbjct: 117 KVKNFKGKKIECAIRINPEYSEIETDIYNPCFENSRMGVTLANFEEEDIEGID------- 169 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + ++ + ++ + ++ ++ I+ GGG +H Sbjct: 170 ----GLHFHTMCEQNSDTLERTIKVVDEKFGKYIKKMKWINFGGG----HHITREDYDIE 221 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 I ++ LEPG + + G LV+ V+ K+ + + + P Sbjct: 222 TLIKSIKFIKDKYGVQVYLEPGEAIALNTGFLVSTVLDTMKNG--MDIAILDTSAECHMP 279 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + N I + GP C GD I +PGD L Y Sbjct: 280 DVLAMPYRPNIIGAGKPNEFEFTYRFGGPTCLAGDIIGDYSFKEPLKPGDKLVFCDMAIY 339 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 V++ T+N L + + + + +++ Sbjct: 340 SMVKNNTFNGVNLPAIVKYSEEKGIEVIKEFGYEDF 375 >gi|260887132|ref|ZP_05898395.1| carboxynorspermidine decarboxylase [Selenomonas sputigena ATCC 35185] gi|330839096|ref|YP_004413676.1| carboxynorspermidine decarboxylase [Selenomonas sputigena ATCC 35185] gi|260863194|gb|EEX77694.1| carboxynorspermidine decarboxylase [Selenomonas sputigena ATCC 35185] gi|329746860|gb|AEC00217.1| carboxynorspermidine decarboxylase [Selenomonas sputigena ATCC 35185] Length = 387 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 62/391 (15%), Positives = 112/391 (28%), Gaps = 21/391 (5%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 ++ H V TP Y + +N + V A KA S +A +G Sbjct: 13 EIFHSVPTPAYVVMEDLLRRNLTVLRDLQQETGAHVLLAQKAFSMFHFYPLIAEYLAGSA 72 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 E R A E VFS K D ++ + FN ++ E Sbjct: 73 ASGLFEARLAYEEMKGKENHVFSPAFKEADMAEIVKIADHIVFNSFAQWEKYGEFALKHG 132 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 I + +A + + K G + Sbjct: 133 CACGLRINPEYSTQEHAIYDPCSAGSRLGVKLGDFRPDKMEGLTGLHFHTLCE------- 185 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 + + L + ++ + ++ I+ GGG I Sbjct: 186 --------QGAGPLAETLEAVEEKFGAWLPQMEWINFGGGHHITREDYDIDL----LKQC 233 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 I + K+ +EPG + D G LV +V ++ + T V + P + + Sbjct: 234 IMRMQTKYGLKVYIEPGEAIALDAGFLVAEV--LEIVENDTPVAILDTSAACHMPDVIEM 291 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + + GP C GD I A + Y V++ Sbjct: 292 PYRPPVLGAGEAGEKPFAYTFAGPTCLAGDTIGTYSFDAPLAASRRIVFGDMAIYTMVKN 351 Query: 380 GTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 T+N L + V+ + + R +++ Sbjct: 352 NTFNGMPLPAIVAVDETGAWQVVRRFGYEDF 382 >gi|302544845|ref|ZP_07297187.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces hygroscopicus ATCC 53653] gi|302462463|gb|EFL25556.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces himastatinicus ATCC 53653] Length = 434 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 93/383 (24%), Positives = 156/383 (40%), Gaps = 18/383 (4%) Query: 47 AFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGK 106 G + +A+KA S V++ L G G ++ S GEL A AA +RIV K Sbjct: 40 VAPGTPVLHAFAVKAASLVPVLRLLTDEGLGCEVASPGELALARAAGTDTDRIVLDSPAK 99 Query: 107 TIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK 166 T E+ AL GI N ++ EL L+ ++P+ RVNP + + +ST Sbjct: 100 TPAELREALDLGIA-LNADNPQELARLDALVAGTPTRSPLGLRVNPQVGGGSIGALSTAT 158 Query: 167 KEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + KFG+ + + + ++ + H+GSQ ++ + +L +++ Sbjct: 159 ETSKFGVALRDVGARDWVVRAFAERPWLTRLHAHVGSQGCPLDLMAAGVQAAYELAEEIN 218 Query: 226 SN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG---NLQCKIILEPGRFLV 280 I +D+GGGL + + SD PS +Y L+ + + ++ E GR L+ Sbjct: 219 ETIGRRQIDTLDIGGGLPVNFTSDEVTPSYREYTQLLKTTVPGLLDGRYGLVTEFGRSLL 278 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH----- 335 A G+++ +V K + + + R + A R Sbjct: 279 AKSGVVLARVEYAKSAGGRPIAVTHAGAQLATRTVFAPTAWPLRIAPYDADGRPKPTGPA 338 Query: 336 --IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + DI GP C GD +A NR + GDL+ + TGAY YNS Sbjct: 339 GPVTQDIAGPCCFAGDLVAENRALPELTAGDLVGLLDTGAYYFSNHFAYNSLPRPGVYGF 398 Query: 394 ----NGSQFHIIRPRMTFQELIE 412 +G +F +R T E++ Sbjct: 399 APDGDGIRFAEVRKPQTVAEIVA 421 >gi|258544778|ref|ZP_05705012.1| carboxynorspermidine decarboxylase [Cardiobacterium hominis ATCC 15826] gi|258519987|gb|EEV88846.1| carboxynorspermidine decarboxylase [Cardiobacterium hominis ATCC 15826] Length = 389 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 118/400 (29%), Gaps = 23/400 (5%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 + L +L TP Y +E+N ++ V ALK + + Sbjct: 7 TFRRLDLSRL----PTPCYVVDEALLERNLQLLAHVQAESGAKVLLALKGFAMFHFAPLI 62 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 + SG+ E + E FS D ++ S FN ++ E Sbjct: 63 SRYLSGVCASGLHEAKLGRE-FFSGEVHTFSAAYPPADMDEVLALSDHVIFNSCNQWERF 121 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 A + K R+NP + + G+ Q+ Sbjct: 122 RAQALAAAKRKPLHFGLRINPQQSEGAVAIYDPSAPGSRLGVIRGQLRPESLTGI----- 176 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + + L + +Q +Q ++ GGG + Sbjct: 177 ------TGLHFHNLCEQDVAPLRRTLAAVERQFGDILPQMQWVNFGGGHHVTREG----Y 226 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + +LI + ++ +EPG + G+ VT+V+ + ++D + Sbjct: 227 AVEELIALIRAFRERWGVEVFIEPGEAVALGTGVYVTEVLDVIW-NHLNIAVIDGSCTAH 285 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + L Y +R I G C GD I G L Sbjct: 286 LPDVLEMPYRPDVLGGAMPHERP-YTYRIGGLTCLAGDIIGDYSFAEPLEVGKRLMFMDM 344 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRM-TFQEL 410 Y V++ T+N L + + + R +++ Sbjct: 345 SHYTMVKTNTFNGVKLPAIVAWDSRTDALTTVREFGYEDF 384 >gi|302308137|ref|NP_984947.2| AER087Cp [Ashbya gossypii ATCC 10895] gi|299789313|gb|AAS52771.2| AER087Cp [Ashbya gossypii ATCC 10895] Length = 450 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 77/380 (20%), Positives = 127/380 (33%), Gaps = 31/380 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ +E+ + YA+K N + V++ LA LG D S+ E+ R Sbjct: 81 FFVCDLGEVERLLRYWRRELPR--VQPYYAVKCNPDVRVLERLASLGVNFDCASKAEIER 138 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V ERI+++ K I A G+ ++ EL + + I Sbjct: 139 VLQLGVAPERIIYANPCKVSSFIRFAAARGVRQSTFDNVEELYKIARFHPESQLLLRI-- 196 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +T + + K+G ++ L A + L + + GV HIGS Sbjct: 197 --------STDDSTAQCQLSAKYGCSPDEVDPLLAKVAELG-LNLVGVSFHIGSGASDFS 247 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 S +A R + + G + GG S+ A+L + Sbjct: 248 SLTQAVVDARRVFDRAAHFGLPALRVLDVGGG--FQFDTFHQSSAILNAALDTHFPPGSG 305 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSA------------DKTFVILDVAMNDFMRPTL 316 ++I EPGRFLVA L + VI+ ++ + L Sbjct: 306 VELIAEPGRFLVATAFTLSSHVIAKRELPERGSMLYINDGIYANMNCILFDHYQPTPRVL 365 Query: 317 YD---AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 Y ++ I GP C+ D I + GD LY G Sbjct: 366 YHAAAFHYFDTTSSKSRTAACPHRTSIWGPTCDGLDCITDEYYLRYDLAVGDWLYFANFG 425 Query: 373 AYGAVQSGTYNSRLLIPEIM 392 AY + + +N E++ Sbjct: 426 AYTSSAATPFNGFEAAVEVI 445 >gi|226943361|ref|YP_002798434.1| Ornithine decarboxylase [Azotobacter vinelandii DJ] gi|226718288|gb|ACO77459.1| Ornithine decarboxylase [Azotobacter vinelandii DJ] Length = 387 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 91/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I Y + F + YA+KAN +I+ L GS DI Sbjct: 21 ADKQETPFVVIDTEIIANAYEELGDCFPF--ARIYYAVKANPAVEIIRLLRDKGSNFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + +A V ER+ + K +I + G+ F +S E N + G Sbjct: 79 SRYELDKVMAEGVGPERVSYGNTIKKAKDIRYFYEKGVRLFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + +A KFG L A L V G+ H+G Sbjct: 137 SKVYVRILTEGTASA-------DWPLSRKFGCQPDMALDLMILARQLGLV-PYGLSFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I+ + ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDIDVWDAVIAKVKVIFERLKQEDGIELKMINMGGGFPANYITKTNSLQTYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG +IILEPGR L+A+ GILV++V+ + + + + Sbjct: 249 FLKEDFGEELPEIILEPGRSLIANAGILVSEVVLVSRKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I Y + I GP C++ D + N K + L GD LY TGAY Sbjct: 309 MDEAIKYPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLASGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|94499814|ref|ZP_01306350.1| carboxynorspermidine decarboxylase [Oceanobacter sp. RED65] gi|94428015|gb|EAT12989.1| carboxynorspermidine decarboxylase [Oceanobacter sp. RED65] Length = 399 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 63/392 (16%), Positives = 111/392 (28%), Gaps = 12/392 (3%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P + AIE+N + + V ALKA S + SG Sbjct: 12 KRLPSPCFVVDEVAIERNLKILHHVQEQSGAKVLQALKAFSMYHLAPLSRQYLSGTCSSG 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN-QRAVSLG 141 E E VFS D + L + FN S+ + A Sbjct: 72 LHEALLGQE-YYGGEVHVFSAAYSEDDLVRLLEFAHHIVFNTPSQILRFYPLLKAAQEKR 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 R+NP+ + + G ++ + + Sbjct: 131 DDLSFGLRINPEHSEGAVPIYDPCAAGSRLGTTQDELMQALQTDEFHQAFHLVS---GLH 187 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + F + L+ + ++ + ++ GGG I + I Sbjct: 188 FHTLCEQGFKPLQRTLKAVEERFAKWLPQMTWLNFGGGHHITAPD----YDIHGLVNAIR 243 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL--YDA 319 + LEPG + GIL +V+ I + ++ A Y Sbjct: 244 LIKQKYSVDVYLEPGEAVAIGSGILSAEVLDIGFNQLPQAILDTSATCHMPDTLEMPYRP 303 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 N + D + G C GD I + GD L E Y V++ Sbjct: 304 DIRFNNELAGMADEKRYNYRFGGLTCLAGDVIGDYSFEQELKVGDRLIFEDMAHYTMVKT 363 Query: 380 GTYNSRLLIPEIMVNGSQFHI-IRPRMTFQEL 410 T+N L + N + + ++ + Sbjct: 364 TTFNGTKLPALAIWNSQTDDLNVVRVFSYDDF 395 >gi|229588356|ref|YP_002870475.1| putative ornithine decarboxylase [Pseudomonas fluorescens SBW25] gi|229360222|emb|CAY47079.1| putative ornithine decarboxylase [Pseudomonas fluorescens SBW25] Length = 387 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 91/373 (24%), Positives = 145/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I + Y F+ V YA+KAN +I L GS DI Sbjct: 21 ADKQETPFVVIDTAMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKDKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + + V +RI + K +I + G+ F+ +S E N + G Sbjct: 79 SIYELDKVMDRGVSPDRISYGNTIKKSKDIRYFYEKGVRLFSTDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 SKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ + +++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDNIHLKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD LY TGAY Sbjct: 309 MDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|149198544|ref|ZP_01875588.1| hypothetical protein LNTAR_18515 [Lentisphaera araneosa HTCC2155] gi|149138259|gb|EDM26668.1| hypothetical protein LNTAR_18515 [Lentisphaera araneosa HTCC2155] Length = 389 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 67/412 (16%), Positives = 128/412 (31%), Gaps = 31/412 (7%) Query: 1 MSAFKYFE---GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY 57 M Y + + E++ L +P Y A+E+N D D + Sbjct: 1 MDY--YKDIFPDRPYLEDLDLRSFPE---SPAYIIDEQALERNLEILKEIKDKTDCKILL 55 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 ALKA SN + G S E + A + V + + + S Sbjct: 56 ALKAFSNYKTFPLIKKYLDGCCASSLWEAQL---AYEEFGKEVHTYSPSYRSDELNQISS 112 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 S ELK + + + P + Sbjct: 113 YSNHIIFNSVQELKRYKA--------------SLKGTELGLRINPEHSETDVELYNPCSK 158 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 L A + L G+ I + + Q + + L ++ ++ +++G Sbjct: 159 FSRLGAKLADLEGLDIDAISGFHLHTLCQKGADA-LERTLAVFEEKFHKFLPKLKWLNLG 217 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GG I + ++ ++ LEPG + + G L+ V+ +SA Sbjct: 218 GGHHITQVGYDKDLLMRLI----NKLKTKYDLQVYLEPGEAVAINTGSLLCTVLDTFESA 273 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 I+D++ M L Y G + + G C GD I + Sbjct: 274 GIHHAIVDISATCHMPDVLEMPYRPDIRGAGEEGQK-KFSYRLGGTSCLAGDSIGIYSFE 332 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + GD L + Y V++ +N + + S+ ++ + T+++ Sbjct: 333 EELKRGDRLLFDDMSHYTMVKTSFFNGVRHPSIYLKDKSRRDVLLKKFTYED 384 >gi|239994540|ref|ZP_04715064.1| Carboxynorspermidine decarboxylase [Alteromonas macleodii ATCC 27126] Length = 391 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 67/398 (16%), Positives = 130/398 (32%), Gaps = 28/398 (7%) Query: 16 VSLEKLAHV--VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 + L L + +P Y + KN D + ALK S + + Sbjct: 14 IPLTDLTQRTDIPSPCYVLEEAKLIKNLELMKRVQDESGARIILALKGFSMWSCFDIIKQ 73 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 G S E + A A + E +S K D +LA FN ++ Sbjct: 74 YLHGATASSVWEAKLA--AEMGKEVHAYSPAYKVNDAKELAGLVNHLSFNSLTQWNAHK- 130 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 V ++ + + P L AS L G + Sbjct: 131 ---------------DVLAGVSLGLRINPEHQEADTPLYDPAAPGSRLGIRASELEGADL 175 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 SG++ + + +SF A + L + ++ ++ +++GGG + Sbjct: 176 SGIEGFHCHNLCECDSFATA-RTLEAIEKRFGKWLGQLKWLNLGGGHLMTREGYDVEHLI 234 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + +Y +ILEPG + G L+ +V+ + ++ + + Sbjct: 235 NTLKDFKARYPHL---DVILEPGSAVAWQTGPLICEVVDMVENDGD--IAILDISATAHM 289 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P + + + + D + + G C GD I A + GD L E Sbjct: 290 PDVLEMPYRPTILSAGMPDEKAYNVKLGGNSCLAGDVIDTYSFDAPLKAGDRLQFEDMMH 349 Query: 374 YGAVQSGTYNSRLLIPE-IMVNGSQFHIIRPRMTFQEL 410 Y V++ +N I+ + F ++R ++++ Sbjct: 350 YTMVKTTFFNGVEHPAIGILRSNGDFELVRE-FSYEDF 386 >gi|317127307|ref|YP_004093589.1| carboxynorspermidine decarboxylase [Bacillus cellulosilyticus DSM 2522] gi|315472255|gb|ADU28858.1| carboxynorspermidine decarboxylase [Bacillus cellulosilyticus DSM 2522] Length = 375 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 64/382 (16%), Positives = 112/382 (29%), Gaps = 22/382 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP Y +EKN + + A KA S A+ + +G Sbjct: 4 EELPTPCYVVDEALVEKNLKILNGVMARTGCKIVLAQKAFSMTAMYPLIGEYLNGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + E VF+ + + ++ FN S+ + Sbjct: 64 LFEARLGHE-EMGKENHVFAPAYRDDEIDEIISICDHIIFNSFSQLDKFKDKALQAGKKV 122 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + H+ +FG+ + + Sbjct: 123 GLRINPECSTQV---GHEIYDPCASGSRFGVTKKHFRP-----------DLLDGVSGLHF 168 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ L + ++ ++ I+ GGG I P I + Sbjct: 169 HTLCQQNSDDLETTLHAVEEKFGEWLPQMEWINFGGGHHITREDYDIPL----LEKCIKR 224 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 N + LEPG + D G ++T V+ ILD + + M L Y Sbjct: 225 MQENYGLSVYLEPGEAVALDAGYMITTVLDT-HQNGMDIAILDTSASCHMPDVLEMPYRP 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + G++ + G C GD I + GD L Y V++ T+ Sbjct: 284 PLFNSGETGEKP-FTYRLGGQTCLAGDVIGDYSFDKPLQSGDRLVFGDMAIYSMVKNTTF 342 Query: 383 NSRLLIPE-IMVNGSQFHIIRP 403 N L I HI++ Sbjct: 343 NGMPLPAIAIKAKDGDCHIVQQ 364 >gi|119945152|ref|YP_942832.1| ornithine decarboxylase [Psychromonas ingrahamii 37] gi|119863756|gb|ABM03233.1| ornithine decarboxylase [Psychromonas ingrahamii 37] Length = 392 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 88/384 (22%), Positives = 145/384 (37%), Gaps = 24/384 (6%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A V+TPF + +E ++ N F + YALKAN +I + + G D+ Sbjct: 21 AKEVETPFVIIDSATVEDHFDALRNNFPW--AEIYYALKANPAHEIIDIVNNKEGGFDLA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL R ++ + I + K +I +GI F +S+++L + A Sbjct: 79 STYELDRVISHGTDPDLISYGNTIKKRADIKYFYDAGIRMFVTDSDADLANIAAMAPGAK 138 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I N + KFG L A L ++ GV H+G Sbjct: 139 VYVRILTEGNLTAD---------WPLSRKFGCQPDMAMDLLVKAQKLG-LEPYGVSFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 SQ I ++ A ++ + ++L+S + + GG A + + A + Sbjct: 189 SQQRDIGAWDGAIATVKVIFERLKSENNIELQMINMGGGFPAQYIHQTNTLAVYAAEIQR 248 Query: 262 QYFGNLQ---CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + +IILEPGR LVA+ GILVT+V+ + + ++ + Sbjct: 249 FLIEDFGATLPRIILEPGRSLVANAGILVTEVVQVSRKSNTALHRWVYTDVGLFSGMIET 308 Query: 319 -----AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEK 370 Y +P I GP C++ D + + K LP + GD L+ Sbjct: 309 LGEAIKYPLYCETSSPGTGEESEEVVIAGPTCDSADILYEDYKYRLPHSLKEGDRLFWFS 368 Query: 371 TGAYGAVQSG-TYNSRLLIPEIMV 393 TGAY S +N + V Sbjct: 369 TGAYTTSYSAVEFNGFPPLKSYFV 392 >gi|169860158|ref|XP_001836715.1| ornithine decarboxylase [Coprinopsis cinerea okayama7#130] gi|116502232|gb|EAU85127.1| ornithine decarboxylase [Coprinopsis cinerea okayama7#130] Length = 503 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 76/382 (19%), Positives = 135/382 (35%), Gaps = 41/382 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + + + YA+K N + VI+ LA LG+G D S E+ Sbjct: 107 FFVADLSQVYRQHQRWITCLPEI--QPFYAVKCNPDPYVIRLLAALGAGFDCASLNEISS 164 Query: 89 ALAA-PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L + RI+F+ K + I A + G+ ++ EL + + I Sbjct: 165 VLNVGGIDPSRIIFANPCKAVSFIRNASRMGVDTMTFDNADELYKVARSHPKAKLVVRIL 224 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S KFG P++ + SL A A L + + GV H+GS Sbjct: 225 ----------TDDSKSLCAFGIKFGAPLNVVPSLLAKAKEL-NLDVVGVSFHVGSGCYDP 273 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + A R + + G++ +D+GGG A + Sbjct: 274 SVYTDAIMRSRTVFDMAKEAGYDFTLLDIGGGFEDALFEKAATVLREAI---DRYFPDRK 330 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKT-----------------FVILDVAMND 310 K+I EPGRF V+ L +I+ + +K ++ + Sbjct: 331 HIKMIAEPGRFYVSTAFKLAAHIIARRAPLEKDAAPATSGTAEEPDQPKVMYYINDGVYG 390 Query: 311 FMRPTLYDAYHEINYIVNPAG------DRLHIHADIVGPICETGDFIALNRKIA-LPRPG 363 L+D Y+++ G + + GP C++ D ++ + + G Sbjct: 391 AFNCILFDHQVIHPYVLSMGGSFHVAESEPKHVSSVWGPTCDSIDCVSPKTVLPVNLQVG 450 Query: 364 DLLYIEKTGAYGAVQSGTYNSR 385 D L GAY + +N Sbjct: 451 DWLGFNNMGAYTVCAASQFNGF 472 >gi|295812475|gb|ADG34834.1| ornithine decarboxylase [Sporothrix schenckii] Length = 410 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 78/387 (20%), Positives = 142/387 (36%), Gaps = 45/387 (11%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + L + + YA+K N + V++ LA LG+G D S+ E+ + Sbjct: 24 FFVADLGEVYRQQLRWKMNLPRVKP--FYAVKCNPDPKVLRLLAELGNGFDCASKAEIEQ 81 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ KT + G+ ++ EL+ + + I Sbjct: 82 VLDMGVDPSRIIYAQPCKTNSYVRYVASKGVRAMTFDNADELRKIAKLYPDAELFLRIL- 140 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A A L + + GV H+GS + Sbjct: 141 ---------TDDSSSLCRLSLKFGASLDTTDGLLALAREL-NLNVVGVSFHVGSGASDPQ 190 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + + Q ++G++++ +DVGGG + D +L + +L Sbjct: 191 AFLKAVQDAYAVFSQAATHGYSLRTLDVGGGFCSDDSFEGMATVLRD--ALDEYFPPHLG 248 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADK-------------TFVILDVAMNDFMRPT 315 +I EPGR+ V+ V + +I+ + D V ++ + Sbjct: 249 VSLIAEPGRYFVSSVFTIACNIIARRTLEDPEQAVDGNARRDPSYMVYVNDGLYGNFSSI 308 Query: 316 LYDAYHEI----------------NYIVNPAGDRLHIHADIVGPICETGDFIALNRKI-A 358 ++D + + + I GP C+ D I + + Sbjct: 309 MFDHQNPVAKVLTSSARFLYDTEGAHATTADAGAAGTEYSIWGPTCDGIDRITESIRFRQ 368 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 GD LY E GAY + + +N Sbjct: 369 TLDVGDWLYFEDMGAYTSCSATRFNGF 395 >gi|224368176|ref|YP_002602339.1| LysA3 [Desulfobacterium autotrophicum HRM2] gi|223690892|gb|ACN14175.1| LysA3 [Desulfobacterium autotrophicum HRM2] Length = 416 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 89/408 (21%), Positives = 164/408 (40%), Gaps = 40/408 (9%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 E H ++ L FY Y I F Y++K N + Sbjct: 2 ENDFHI----IKNLMKQYDGSFYIYDEKKISSQIQILLENFPQ--FEFLYSIKTNPFPPI 55 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 +K +A G G D S E+ A +P E+I++S GKT +I+ + +S Sbjct: 56 VKFVASKGFGADAASAQEVITGQKAGMPYEKILYSSPGKTSKDIERTI--DKAMIIADSY 113 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 +EL +N A + R+N D + + K KFG+ + + + + Sbjct: 114 NELVLINSVAQQKNIHKKVGLRINIDFSMDGEK-----GTSSKFGVDENTLVKQKEFLNG 168 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGGGLGIAYHS 246 +KI G+ +H+ QI + ++ + +L + ++ I++GGGLGI Y Sbjct: 169 FSNIKIVGIHVHLRCQILDHGKICRYYERIIELGLFCKETLGWEMEFINLGGGLGIVYSL 228 Query: 247 DHRPPSS-----SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + P D LI ++ L+ ++I+E GRF+ + G VT+++ IK+S + Sbjct: 229 INDTPLDIEKLSCDCQGLIQRFNDKLKVRLIIETGRFITCEAGRYVTRIVDIKESLGTKY 288 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL--------------------HIHADIV 341 +I++ +N F RP++ + + + H IV Sbjct: 289 LIVEKGLNGFSRPSIAELLMDYTPENSNLKASEPLFTTKDAFEFIIPEGDTFDHEKVSIV 348 Query: 342 GPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLI 388 G +C D + + + + GD++ + K G+Y S ++S L Sbjct: 349 GSLCTATDILVKDAMLPKAKIGDIVIVSKAGSYSYSLSPILFSSFCLP 396 >gi|2337850|emb|CAA61274.1| ornithine decarboxylase [Ustilago maydis] Length = 459 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 83/408 (20%), Positives = 145/408 (35%), Gaps = 63/408 (15%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + +L + A + + YA+K N + V++ L LG+G D S GE+ Sbjct: 44 FFVADLSEVYRQHLRWMRALPRI--VPFYAVKCNPDPYVLQLLGALGTGFDCASNGEIEA 101 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L + RI+++ K + A + ++ EL+ + + S I Sbjct: 102 VLKLGINPARIIYANPSKAASFVRHAAGHNVGLTTFDNMDELEKMKRYHPSCKLVVRIL- 160 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG PI + L A L + + GV H+GS + Sbjct: 161 ---------TDDSKSACQLGLKFGAPIASVPRLLERARELE-LDVVGVSFHVGSGCYDPD 210 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----------RPPSSSDYAS 258 SF A + + G + +DVGGG G P Sbjct: 211 SFRDAVYR-ACAFEMGKQAGFSFDLLDVGGGFGHDNFEMVAGVLGPAIDAYFPDEDFAPG 269 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK-----SADKTFVILDVAMNDFMR 313 +II EPGRF V L T +I++++ + D + + Sbjct: 270 GKEVVGKVNGLRIIAEPGRFYVHSAFALATNIIAVRRGEPSAAMDHVEATPKAQVMYYQN 329 Query: 314 PTLYDAYHEINY------IVNPAGDRLHIHAD---------------------------I 340 LY +++ + + + AG R+ + AD + Sbjct: 330 DGLYGSFNCVIFDHVKFIQSSDAGPRVRVRADDWVARGASGECGRLALQQEAMTLESCSV 389 Query: 341 VGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 GP C++ D + + ++ + GD L E GAY + T+N Sbjct: 390 WGPTCDSIDCVRDHVELPKGLQVGDWLVYENMGAYTICAASTFNGIRR 437 >gi|21281825|ref|NP_644911.1| hypothetical protein MW0096 [Staphylococcus aureus subsp. aureus MW2] gi|49485000|ref|YP_042221.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus MSSA476] gi|297209376|ref|ZP_06925774.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911376|ref|ZP_07128825.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH70] gi|21203260|dbj|BAB93961.1| putative diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus MW2] gi|49243443|emb|CAG41864.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus aureus subsp. aureus MSSA476] gi|296885837|gb|EFH24772.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887555|gb|EFK82751.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus TCH70] Length = 400 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 148/371 (39%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + + + + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITLSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L A PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 KL + + ++HI++GGG+G+ Y ++ + Sbjct: 198 HVDVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQE 257 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + + E GRF+VA +G VT+V+ IKK + IL F P + H Sbjct: 258 MEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEI 317 Query: 326 IVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 I VG +C D A +I GD++ + GAYG Sbjct: 318 YRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSI 377 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 378 SHHDFLSHPHP 388 >gi|326775090|ref|ZP_08234355.1| Diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1] gi|326655423|gb|EGE40269.1| Diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1] Length = 464 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 90/411 (21%), Positives = 154/411 (37%), Gaps = 29/411 (7%) Query: 26 QTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVC-YALKANSNQAVIKTLAHLGSGLDIVS 82 +P + T + + +AF ++ +A KA S V++ LA G G ++ S Sbjct: 36 GSPVAGFI-DTEGVRASVGALHDAFAATPGVLHTFAAKACSLVPVLRLLADCGMGCEVAS 94 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GELR AL A PA RIV KT +EI LAL G+ + EL+ ++ + G Sbjct: 95 PGELRLALEAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLD-ELRRVDALR-APGT 152 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDMHIG 201 + + RVNP + + +ST KFG+ + + A ++ + H+G Sbjct: 153 ASVLGLRVNPQVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVG 212 Query: 202 SQID--QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 SQ + + A + +D+GGGL + + + P+ +Y + Sbjct: 213 SQGCPLDLIAAGVAQTYELAEEINATPGVRGVTSLDIGGGLPVNFADETVRPTYPEYVAA 272 Query: 260 IHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + + + ++ E GR L+A G + +V K + + + R L Sbjct: 273 LTAAAPGLFSGRYSLVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVL 332 Query: 317 YDAYHEINY----IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + + D+ GP C GD +A R++ GDL+ + TG Sbjct: 333 MPDAWPLRIGVFGPDGTPKGGPPLAQDVAGPCCFAGDVVAYGRELPELAEGDLVVLYDTG 392 Query: 373 AYGAVQSGTYNSRLLIPEIMVN------GSQFH-------IIRPRMTFQEL 410 AY YNS H +R + E+ Sbjct: 393 AYYFSTPWAYNSLPRPAVYGFRAVPGRGDGTGHGRQVTFVTVRDAQSLDEI 443 >gi|154253672|ref|YP_001414496.1| Orn/DAP/Arg decarboxylase 2 [Parvibaculum lavamentivorans DS-1] gi|154157622|gb|ABS64839.1| Orn/DAP/Arg decarboxylase 2 [Parvibaculum lavamentivorans DS-1] Length = 433 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 84/375 (22%), Positives = 145/375 (38%), Gaps = 20/375 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 +P + N+ +++ D + YA+KAN ++ LA LGS D S GE Sbjct: 72 PSPCLVVDVDIVAHNFGELASSLP--DARIFYAVKANPADEIVSRLAGLGSSFDTASMGE 129 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + L+ V A+R+ F K +I A G+ F +S +EL + + A Sbjct: 130 IDLCLSHGVSADRLSFGNTIKKERDIAAAYAKGVRMFAFDSTAELDKIARVAPGSKVYCR 189 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + KFG L A L + GV H+GSQ Sbjct: 190 VLMECEGA----------EWPLSRKFGCEPAMAVDLLVRAKALG-LDAYGVSFHVGSQQT 238 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QY 263 + + KA L L + L + G ++ +++GGG Y +D S+ A ++ Sbjct: 239 DLTQYDKALALSLSLFRDLEARGVKLRMVNMGGGFPSRYRTDVPSISAYGAAIREALLRH 298 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 FG+ Q +I+EPGR +V D G++ +V+ + + I Sbjct: 299 FGDSQPDVIVEPGRGVVGDAGVIQAEVVLVSEKGGDDARRWVYLDAGKFHGLAETMDEAI 358 Query: 324 NYIVNPAGD-RLHIHADIVGPICETGDFIAL--NRKIA-LPRPGDLLYIEKTGAYGAVQS 379 Y + + D + GP C++ D + + ++ GD ++I TGAY S Sbjct: 359 KYRLLTSRDGGETSPVVLAGPTCDSADILYEKTDYRLPSELEAGDKVWILATGAYTTTYS 418 Query: 380 GT-YNSRLLIPEIMV 393 +N + + + Sbjct: 419 AVAFNGFPPLASVCI 433 >gi|50085824|ref|YP_047334.1| putative ornithine decarboxylase [Acinetobacter sp. ADP1] gi|49531800|emb|CAG69512.1| putative ornithine decarboxylase [Acinetobacter sp. ADP1] Length = 386 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 91/377 (24%), Positives = 147/377 (38%), Gaps = 19/377 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 LE L TPF + IEK+YL F D + YALKAN VI L LGS Sbjct: 15 LEDLVRTKDTPFLVLDLSVIEKHYLELKQGFPNTD--IYYALKANPANEVIDRLNSLGSN 72 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+ S EL++ A V A R+ F K +I G+ + +S+ +L + A Sbjct: 73 FDLASVNELKKVQAFGVDASRLAFGNTIKKRIDIQYFYDQGVRLYVTDSDIDLNNIAHYA 132 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 ++ + + KFG + L A L + G+ Sbjct: 133 PGSKVFFRLSIDGSETAD---------WPLSGKFGCNAECVIRLAIKAKELGLI-PYGIS 182 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAYHSDHRPPSSS-- 254 H+GSQ +I+ + A + + + L + + ++ +++GGGL Y + + Sbjct: 183 FHVGSQQRKIDLWDSALQETKAIFDVLATEHNIRLKMLNLGGGLPAQYVQETEAFDNYSK 242 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + + +IILEPGR LV + GILV++++ I + Sbjct: 243 QINAALEIFKSYHLEQIILEPGRSLVGNAGILVSEIVLISQRPQSGTKRWVYTDVGVFNG 302 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKT 371 + I Y + + GP C++ D + N ++ L GD LY T Sbjct: 303 LIETLGESIQYPIMCKKTGNSDDIILAGPTCDSMDIMYQNKKYELPLSLEIGDHLYWLST 362 Query: 372 GAYGAVQSG-TYNSRLL 387 GAY S +N Sbjct: 363 GAYTTSYSSIEFNGFPP 379 >gi|70724836|ref|YP_257046.1| LysA protein [Sodalis glossinidius] gi|85060454|ref|YP_456155.1| achromobactin biosynthetic and transport gene lysA [Sodalis glossinidius str. 'morsitans'] gi|68696955|emb|CAI59315.1| LysA protein [Sodalis glossinidius] gi|68697041|emb|CAI59488.1| LysA protein [Sodalis glossinidius] gi|84780974|dbj|BAE75750.1| achromobactin biosynthetic and transport gene lysA [Sodalis glossinidius str. 'morsitans'] Length = 401 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 76/366 (20%), Positives = 137/366 (37%), Gaps = 10/366 (2%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 + Y A++++ A + YA+KANS +++TLA G +I S GE+ R Sbjct: 26 FIYDLAALQQHIRQVMEALPD-GAELYYAIKANSEPQILQTLAPWVDGFEISSGGEIERL 84 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 AA + VFSG GK ++ AL+ +VES +E+ L + A G+ + R Sbjct: 85 QAAGSD-KPFVFSGPGKLDSDLRAALRRQAAAIHVESLNEIDRLQRLAREQGRVQTVLIR 143 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 +NP + A +++ FGI + + + G +H S + Sbjct: 144 INPQLPAQISSRLAMAGTATPFGIDEADLAVAVHRVDNADHLVLQGFHVHAMSHQQSEQR 203 Query: 210 FHKAFKLLRDLTQQLRSNGHNIQHID--VGGGLGIAYHSDHRPPSSSDYASLIHQ--YFG 265 + + Q ++ + I GG + + + + Sbjct: 204 HRQLMEYYLQRWPQWKALSAQQEGITHLNVGGGIGVDYLSTSQFDWPGFCHWLGELLAVT 263 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ EPGRF+ A G +++ K S K F++ + F P H I + Sbjct: 264 AGAPRLRFEPGRFISAFCGYYAIEILDQKTSHGKHFLVCRGGTHQFRLPVAQGHDHPIIH 323 Query: 326 -IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA--VQSGTY 382 G +VG +C D ++ + + GD+L + GAYG + + Sbjct: 324 LPQRSDGAGELCAWTVVGQLCTPKDVLSRDCSLKGVAIGDMLVLPLAGAYGYNISHA-DF 382 Query: 383 NSRLLI 388 Sbjct: 383 LCHPRP 388 >gi|269792190|ref|YP_003317094.1| Orn/DAP/Arg decarboxylase 2 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099825|gb|ACZ18812.1| Orn/DAP/Arg decarboxylase 2 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 392 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 89/385 (23%), Positives = 146/385 (37%), Gaps = 19/385 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ A +TP + + + Y YA+KAN + +I+ L+ GS Sbjct: 21 RIKAFASQKETPCLVMDMSKVIERYQEIDREMGFAKC--YYAVKANPHDEIIRELSKRGS 78 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S EL + L V ERI + K ++ A G+ F + ES+L+ + + Sbjct: 79 CFDVASIYELDQLLRLGVEPERISYGNTIKKARDVAYAYSKGVRVFATDCESDLRKIAEN 138 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + KFG I+ L ++ LP V+ G+ Sbjct: 139 APGSKVFYRILSDCSGA----------DWPLSRKFGTHPDSIYRLIGLSTRLP-VEPYGL 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS-- 254 H+GSQ I + + L R +++ I++GGGL Y P S Sbjct: 188 SFHVGSQQRDIGQWGFLISTCKYLFDSAREFNVDLKMINLGGGLPAQYLEPTAPLSLYAS 247 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + + FG +I +EPGR +V D G+LV++V+ I K + Sbjct: 248 EILRFLKEDFGEKLPEIWIEPGRGMVGDAGVLVSEVVMISKKSQTNPYSWVYLDAGKFGG 307 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKT 371 + I Y + + GP C++ D + + K LP GD +Y Sbjct: 308 LIETLDEAIKYPIYVDRRGPSQKTILAGPTCDSVDILYEHFKYELPVSLSEGDRVYFLSA 367 Query: 372 GAYGAVQSG-TYNSRLLIPEIMVNG 395 GAY A +N I + G Sbjct: 368 GAYTASYCSVNFNGFPPIKTYIFEG 392 >gi|157103351|ref|XP_001647941.1| ornithine decarboxylase [Aedes aegypti] gi|108884773|gb|EAT48998.1| ornithine decarboxylase [Aedes aegypti] Length = 408 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 82/408 (20%), Positives = 139/408 (34%), Gaps = 30/408 (7%) Query: 1 MSAFKYFEGSLHA--ENVSLEKLAHVVQT------PFYCYSTTAIEKNYLTFSNAFDGMD 52 MS + + ++VS L + + T P + + K + + + Sbjct: 1 MSLLSVLKNRVEIVDDSVSSRDLVNRLVTQGPQEEPLHLTEVDTLVKRHYEWLQHLPRVK 60 Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 YA+K+N ++++ +G G D S E+RR L V ERI+F+ KTI + Sbjct: 61 P--YYAVKSNDEASLVEATVLMGLGYDCASMAEVRRMLELGVERERIIFAQPQKTIVSLQ 118 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 A + I ++ +A + R D K S KFG Sbjct: 119 YARKHKILTVFDSEC-----ELRKIHQHYPEAEVLIRYRFD------SKKSKVNLGSKFG 167 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + G+K+ G ++GS + F+ A K R++ S G + Sbjct: 168 CETENESKSLLHVAKQLGIKVVGWCFNVGSGCTDADVFYAAIKKGREIHDYATSIGFKFR 227 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 ID+GGG + +L Y + I EPGR+ A ++ V Sbjct: 228 MIDLGGGFMGDKGCGIEEYAVHINRALEECYPASEDIFIFAEPGRYYCAAAVTSISPVHG 287 Query: 293 IKKSADKT---------FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 + ++ + D F P + + + GP Sbjct: 288 KRILCNENDPLKIEQVFYYFNDGMYGTFYSPRYRNQTLYPIVWKSGGNLGTTYKTTLFGP 347 Query: 344 ICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 C+ DF A + + D + E GAY V S +N L I Sbjct: 348 TCDGNDFFAKDIDLPELEVSDFVVFENQGAYARVHSCRFNGFCLPKVI 395 >gi|257439172|ref|ZP_05614927.1| carboxynorspermidine decarboxylase [Faecalibacterium prausnitzii A2-165] gi|257198423|gb|EEU96707.1| carboxynorspermidine decarboxylase [Faecalibacterium prausnitzii A2-165] Length = 404 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 64/385 (16%), Positives = 110/385 (28%), Gaps = 15/385 (3%) Query: 17 SLEKLA-HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 +L + A + TP Y + +N + A KA SN + LA Sbjct: 15 NLSEAALAALPTPCYLLDEARLRRNGEILLGVQQRTGCKILLAQKAFSNYDLYPVLAPYL 74 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G + E R E VF + +L + FN + Sbjct: 75 AGTEASGLYESRLGREELPEKENHVFCAAYRADQFEELLQYADHIVFNSPHQLAKFGPAA 134 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 +A + + H+ + G Q + A LP + Sbjct: 135 KAAGKSVGLRVNPEHSTQ---EGHEIYDPCAPGSRLGTTRAQWDAAAAQHPDLPDLLDGL 191 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + Q L L + ++ ++ GGG I + Sbjct: 192 HFHTLCEQDSD-----ALAATLPALEAKFGDLLPRMKWLNFGGGHHITRPD----YDLAT 242 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 I ++ LEPG + G LVT V+ ++ + ILD++ Sbjct: 243 LEKCITGTQEKYGVQVYLEPGEAWALNAGYLVTTVLDTLQNGETHLAILDMSAACHTPDV 302 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + Y G++ + GP C GD + A GD L Y Sbjct: 303 IEMPYRPPLLDAGEPGEKP-CTFRLGGPTCLAGDVVGNYSFAAPLTEGDRLIFGDMAIYS 361 Query: 376 AVQSGTYNSRLLIPE-IMVNGSQFH 399 ++ T+N L ++ Sbjct: 362 TCKNNTFNGMPLPDIWVLHENGTTQ 386 >gi|182434566|ref|YP_001822285.1| putative decarboxylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463082|dbj|BAG17602.1| putative decarboxylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 464 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 90/411 (21%), Positives = 153/411 (37%), Gaps = 29/411 (7%) Query: 26 QTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVC-YALKANSNQAVIKTLAHLGSGLDIVS 82 +P + T + + +AF ++ +A KA S V++ LA G G ++ S Sbjct: 36 GSPVAGFI-DTEGVRASVGALHDAFAATPGVLHTFAAKACSLVPVLRLLADCGMGCEVAS 94 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GELR AL A PA RIV KT +EI LAL G+ + EL+ ++ + G Sbjct: 95 PGELRLALEAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLD-ELRRVDALR-APGT 152 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDMHIG 201 + + RVNP + + +ST KFG+ + + A ++ + H+G Sbjct: 153 ASVLGLRVNPQVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVG 212 Query: 202 SQID--QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 SQ + + A + +D+GGGL + + + P+ +Y + Sbjct: 213 SQGCPLDLIAAGVAQTYELAEEINATPGVRRVTSLDIGGGLPVNFADETVRPTYPEYVAA 272 Query: 260 IHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + + + ++ E GR L+A G + +V K + + + R L Sbjct: 273 LTAAAPGLFSGRYSLVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVL 332 Query: 317 YDAYHEINYIVNPAGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + D+ GP C GD +A R++ GDL+ + TG Sbjct: 333 MPDAWPLRIGAFGPDGAPKGGPPLAQDVAGPCCFAGDVVAYGRELPELAEGDLVVLYDTG 392 Query: 373 AYGAVQSGTYNSRLLIPEIMVN------GS-------QFHIIRPRMTFQEL 410 AY YNS F +R + E+ Sbjct: 393 AYYFSTPWAYNSLPRPAVYGFRAVPGRGDGPGHGRQVTFVTVRDAQSLDEI 443 >gi|120553020|ref|YP_957371.1| ornithine decarboxylase [Marinobacter aquaeolei VT8] gi|120322869|gb|ABM17184.1| ornithine decarboxylase [Marinobacter aquaeolei VT8] Length = 391 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 84/378 (22%), Positives = 151/378 (39%), Gaps = 19/378 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ A +TPF T I++ Y F V YA+KAN ++ L G+ Sbjct: 20 RIKDFADGKETPFVVIDTQTIDRQYEELVEGFPY--AKVYYAVKANPAPQILNMLRDKGA 77 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI S EL + +A V +RI + K +I + G+ + +SE++L+ + + Sbjct: 78 NFDIASVYELDKVMALGVTGDRISYGNTIKKAKDIRTFYEKGVRLYATDSEADLRNIAKA 137 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + T ++ + + A L GV Sbjct: 138 APGSKVYVRI-------LTEGTLTADWPLSRKFGCQTDMAMDLLILARDLGL---VPYGV 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS- 254 H+GSQ +I ++ A ++ + ++L+ ++ I++GGG Y + Sbjct: 188 SFHVGSQQREIGAWDAALNKVKVIFERLKEEDGIELKMINMGGGFPANYITRTNELGVYA 247 Query: 255 -DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + A +H+ FG+ +II+EPGR L+++ G+LV++V+ I + + Sbjct: 248 EEIARFLHEDFGDDLPEIIIEPGRSLISNAGVLVSEVVLISRKSRTALHRWVFTDVGKFS 307 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEK 370 + I + + I GP C++ D + + K LP GD +Y Sbjct: 308 GLIETLDESIKFPIWTEKSGEGEDCVIAGPTCDSADIMYEHHKYPLPLNLAIGDRMYWLS 367 Query: 371 TGAYGAVQSG-TYNSRLL 387 TGAY S +N Sbjct: 368 TGAYTTTYSAIEFNGFPP 385 >gi|224368132|ref|YP_002602295.1| decarboxylase family protein [Desulfobacterium autotrophicum HRM2] gi|223690848|gb|ACN14131.1| decarboxylase family protein [Desulfobacterium autotrophicum HRM2] Length = 387 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 85/384 (22%), Positives = 150/384 (39%), Gaps = 19/384 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ A TPF T +E+ N F + YA+KAN ++ + Sbjct: 16 RIKTFAEDKDTPFLVIDTATVERRLEQLINVFPY--ASIYYAVKANPAIEILTMMRDKNV 73 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI S EL R L+ + +RI F K ++ + G+ + +SE++++ + + Sbjct: 74 NFDIASIYELDRVLSLGISPDRISFGNTIKKSKDVRYFYEKGVRMYATDSEADIRNIARA 133 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + KFG + L A L + G+ Sbjct: 134 APGSRIYVRILTEGTLTAD---------WPLSRKFGCQLDMAMDLIILAKDLGLI-PYGI 183 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAYHSDHRPPSSS- 254 H+GSQ +I ++ A ++ + +L + N+Q I++GGG Y S + Sbjct: 184 SFHVGSQQREIGAWDAAIGKVKGIFDRLEQEDDINLQMINLGGGFPANYLSKANDLETYG 243 Query: 255 -DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + + FG+ +IILEPGR L+AD G++VT+V+ I + + Sbjct: 244 QEITRFLTESFGDDLPQIILEPGRSLIADAGVMVTEVVLIARKSRTALHRWVYLDVGKFS 303 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEK 370 + I Y + + GP C++ D + N K+ L D +Y Sbjct: 304 GLIETMDESIKYPIFTGKKGEVEEVVLAGPTCDSADILYENYKYKLPLNLAISDRVYWLS 363 Query: 371 TGAYGAVQSG-TYNSRLLIPEIMV 393 TGAY + S +N + + Sbjct: 364 TGAYTSSYSAVEFNGFPPLAVYFI 387 >gi|149374378|ref|ZP_01892152.1| putative diaminopimelate decarboxylase protein [Marinobacter algicola DG893] gi|149361081|gb|EDM49531.1| putative diaminopimelate decarboxylase protein [Marinobacter algicola DG893] Length = 398 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 81/376 (21%), Positives = 135/376 (35%), Gaps = 12/376 (3%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y + + YA KAN V+ LA G ++ S GEL Sbjct: 25 AYVYDLPELRNRAQNIVGCLP-PGCEMFYAAKANPALPVLSALASFVHGFEVASGGELDW 83 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 +F G GK +++ A+ + +VES EL+ L A I Sbjct: 84 VRRHFPDTSV-IFGGPGKLASDLEKAIDQNVELIHVESLLELQRLCDIAGRRQANQDILL 142 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+N ++ +++ G FG+ I A + V++ G H+ S + Sbjct: 143 RINLELADTPSTRLTMGGVPTPFGMEEACIPDALALLARQGRVRLRGFHFHLMSHQLDEK 202 Query: 209 SFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH---QYF 264 K + + G ++ I+VGGG+GI Y + S + + + Q + Sbjct: 203 RHLTLIKHYLETVRTWEAQYGLSLTEINVGGGIGINYTQPDQQFDWSGFCTGLDELLQAY 262 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + +I E GRF+ A G V +V+ +K+ ++ F + + F P H + Sbjct: 263 VDRAWRIRFECGRFITAPCGYYVGEVLDVKRCGEEWFAVCRGGTHHFRTPAAQAHNHPFD 322 Query: 325 YIVNPAGDRLH-----IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + D +VG +C D A IA GDL+ GAY S Sbjct: 323 ILPTNNTDAATPCVTDHSVTLVGQLCTPKDVFARQVHIASLGVGDLVVFRYAGAYAWNIS 382 Query: 380 GT-YNSRLLIPEIMVN 394 + E + Sbjct: 383 HQAFLMHPHPEEYFIE 398 >gi|332668239|ref|YP_004451027.1| carboxynorspermidine decarboxylase [Haliscomenobacter hydrossis DSM 1100] gi|332337053|gb|AEE54154.1| carboxynorspermidine decarboxylase [Haliscomenobacter hydrossis DSM 1100] Length = 379 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 65/389 (16%), Positives = 116/389 (29%), Gaps = 20/389 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V +P Y + +N + V ALK S V + +G S Sbjct: 5 AKVPSPAYVLDEARLRRNLELIQHVQQESGASVILALKGFSMWRVFPMVKQYLAGATASS 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + + + S ++ ++ + Sbjct: 65 LHEARLIFEEMGVPAHTY--SPAYLPAQFEEVMGY-SSHITFNSIAQYARYREQLQQAKQ 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 RVNP+ + + + G + + G K+ + Sbjct: 122 SISPGLRVNPEFSVVETDLYNPSAPGSRLGEMVENL-----------GGKLPEGIEGLHI 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 S L++ + Q+ + +Q I+ GGG + Sbjct: 171 HTLCESSAEDLENLIKSVEQRFGAFFPQLQWINFGGGHLMTRQGYDVERLIKVL---QAF 227 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + Q ++ILEPG + + G LVT V+ + S ILDV+ M TL Y Sbjct: 228 RARHPQLEVILEPGSAIAWETGELVTTVLDVINSRGIKTAILDVSFTAHMPDTLEMPYRP 287 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 D + G C GDF+ +PGD L + Y V++ T+ Sbjct: 288 KVLGATDPVDGKP-TYRLGGSSCLAGDFMTEYSFEQELKPGDRLVLWDMIHYTMVKTTTF 346 Query: 383 NSRLLIPE-IMVNGSQFHIIRPRMTFQEL 410 N I +++ +++ Sbjct: 347 NGVKHPDICIWHEDDTLEVVKKYE-YEDF 374 >gi|325914562|ref|ZP_08176905.1| diaminopimelate decarboxylase [Xanthomonas vesicatoria ATCC 35937] gi|325539213|gb|EGD10866.1| diaminopimelate decarboxylase [Xanthomonas vesicatoria ATCC 35937] Length = 398 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 81/370 (21%), Positives = 138/370 (37%), Gaps = 7/370 (1%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y TA++ + + YA KAN+ ++ TLA G + S GEL Sbjct: 27 AYLYDLTALDAHAAWMRAQLP-AQCELFYAAKANAEPQILHTLAPHVDGFEGASGGELAW 85 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A P ++F G GK E+ A +VES EL+ L A G+ P+ Sbjct: 86 L-HAQQPQAALLFGGPGKLDSELAQAAALPDCTVHVESIRELQRLAAIAARAGRCVPVFL 144 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+N + ++ G + FG+ + + P +++ G H+ S + Sbjct: 145 RMNIAVPGAQGTRLMMGGQPSPFGLDPQDLDAAMHLLRVSPSLRLEGFHFHLMSHQREAG 204 Query: 209 SFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYAS--LIHQYFG 265 + QQ R ++ GGG G+ Y + + + + + Sbjct: 205 AQLHLVAAYLRTVQQWRQTYALGPLRVNAGGGFGVDYLAPDSSFDWAGFCAGLPALLHEH 264 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPGR++ A G + +V+ +K+S F I + F P H Sbjct: 265 GSTLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRV 324 Query: 326 IVNPAGDR-LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYN 383 + +VG +C D +A N+ +A PGD L GAY S + Sbjct: 325 LRGTHAPVISDTPVTLVGQLCTPKDVLARNQPVAALAPGDCLAFPLAGAYAWNISHQQFL 384 Query: 384 SRLLIPEIMV 393 ++ + Sbjct: 385 MHPPPQKVFL 394 >gi|282862736|ref|ZP_06271797.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE] gi|282562422|gb|EFB67963.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE] Length = 469 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 93/396 (23%), Positives = 157/396 (39%), Gaps = 21/396 (5%) Query: 32 YSTTAIEKNYLTFSNAF---DGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + + +AF G+ + +A KA S V++ LA G G ++ S GELR Sbjct: 44 LDAQGVRHSVAALRDAFEAVPGVSVLHTFAAKAASLVPVLRLLAACGMGCEVASPGELRL 103 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A+ A E IV KT+DE+ LAL G+ N +S EL+ + + S + + Sbjct: 104 AVEAGFAPETIVLDSPAKTLDELRLALALGVA-VNADSFDELRRIGELR-SPESASVLGL 161 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL-PGVKISGVDMHIGSQIDQI 207 R+NP + + +ST KFG+P+ + ++ + H+GSQ + Sbjct: 162 RINPQVGGGSIGAMSTATAASKFGVPLRDPGVREQVVRSFAERPWLTRLHAHVGSQGCPL 221 Query: 208 ESFHKAFKLLRDLTQQLRSNG--HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF- 264 E + L +++ I ID+GGGL + + + P+ SDY +++ Sbjct: 222 ELIAEGVAETYRLAEEINEAVGARRITGIDIGGGLPVNFADEEDRPAFSDYVNVLRAAAP 281 Query: 265 --GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ E GR L+A G + +V K + + + R Sbjct: 282 GLFEGRYGLVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQVATRTVFMPDAWP 341 Query: 323 INYIVNPAGDRLH----IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + R + DI GP C GD +A R++ R GD + + TGAY Sbjct: 342 LRIGAFDGQGRPRGGPPMVQDIAGPCCFAGDVVAHARELPELREGDFVALYDTGAYYFST 401 Query: 379 SGTYNSRLLIPEIMV------NGSQFHIIRPRMTFQ 408 YNS +G +F +R + Sbjct: 402 PWAYNSLPRPAVYGFTVGPGGSGVRFARVRDAQSLD 437 >gi|126665613|ref|ZP_01736595.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Marinobacter sp. ELB17] gi|126630241|gb|EBA00857.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Marinobacter sp. ELB17] Length = 391 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 78/375 (20%), Positives = 141/375 (37%), Gaps = 13/375 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 + + A QTPF T I+ +Y F V YA+KAN V+ L G+ Sbjct: 20 RIRQFAEGKQTPFVVIDTATIDSHYNELVEGFPY--AQVYYAVKANPAPQVLTLLRDKGA 77 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI S EL + +A V AERI F K ++ + G+ F +SE++L+ + + Sbjct: 78 NFDIASVYELEQVMALGVTAERISFGNTIKKAKDVRTFYEKGVRMFATDSEADLRNIAEV 137 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + T ++ + + A L +S Sbjct: 138 APGSKIYVRI-------LTEGTLTADWPLSRKFGCQQDMAMDLLILARDLGLVPYGVSFH 190 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +I ++ K++ + ++ + ++ G ++ + + Sbjct: 191 VGSQQREIGAWDAALGTVKVIFERLKEEDGIELKMINMGGGFPANYITRANEVKVYAEEI 250 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + + FG+ +II+EPGR L+++ G+LV++V+ I + + + Sbjct: 251 GRFLREDFGDELPEIIIEPGRSLISNAGVLVSEVVLISRKSSTALHRWVYTDVGKFSGLI 310 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGA 373 I + + D I GP C++ D + + K LP GD +Y TGA Sbjct: 311 ETLDEAIKFPIWTEKDGEGEDCVIAGPTCDSADIMYEDHKYPLPLSLAIGDRMYWFSTGA 370 Query: 374 YGAVQSGT-YNSRLL 387 Y S +N Sbjct: 371 YTTTYSAVGFNGFPP 385 >gi|163868811|ref|YP_001610035.1| lysine/ornithine decarboxylase [Bartonella tribocorum CIP 105476] gi|161018482|emb|CAK02040.1| lysine/ornithine decarboxylase [Bartonella tribocorum CIP 105476] Length = 377 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 87/365 (23%), Positives = 144/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NYL F A + YA+KAN +++ L+ LGS D S E+ Sbjct: 18 PCLIVDLDVVRDNYLNFKKALPQS--RIFYAIKANPAPEILRLLSSLGSSFDAASVAEIE 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A ERI F K +I A G+ + V+ E++ + + A + Sbjct: 76 MALKAGATPERISFGNTIKKERDIAQAYALGVSLYAVDCIEEVEKIARAAPGARVFCRVL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T K + KFG + +A L ++ GV H+GSQ + Sbjct: 136 ----------TDGKGAEWPLSRKFGCVPAMAVDVLKHAHQLG-LQAYGVSFHVGSQQVDL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 ++ +A + + L G +++ +++GGG Y D A ++FG Sbjct: 185 SAWDRALSDAAIVFKNLEQEGISLKLVNMGGGFPTRYLKDVPTEQVYGTAVFDSLKKHFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADK-TFVILDVAMNDFMRPTLYDAYHEIN 324 N + I+EPGR +V + G++ T+V+ I K AD + + + F Sbjct: 245 NRIPETIIEPGRAMVGNAGVIRTEVVLISKKADNDNVRWVYLDIGKFNGLAETMDEAIRY 304 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 I D++ + GP C++ D + LP GD + I TGAY + Sbjct: 305 PIETSHDDKVMEPCILAGPTCDSADVLYEKTPYPLPLSLTIGDKILIHGTGAYTTTYASV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|255539090|ref|XP_002510610.1| ornithine decarboxylase, putative [Ricinus communis] gi|223551311|gb|EEF52797.1| ornithine decarboxylase, putative [Ricinus communis] Length = 416 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 77/367 (20%), Positives = 132/367 (35%), Gaps = 22/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + A+ + T+S + YA+K NS +++ LA LG D S+ E++ Sbjct: 48 PFYVLNLGAVAELMDTWSRQLPMI--QPFYAVKCNSEPSLLGALAALGCNFDCASKVEIQ 105 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ V +RIV++ K + A G+ +S EL +++ + Sbjct: 106 TILSLGVSPDRIVYANPCKAESHLKYAASVGVNLTTFDSVYELDKISKLHPRCAL--LLR 163 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + D A KFG ++ L A + +SGV HIGS+ Sbjct: 164 LKSPDDSAAK------WASLGSKFGALPQEVEPLLRAAQ-AANLTVSGVSFHIGSESTNP 216 Query: 208 ESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ A + R + ++VGGG D + +L + Sbjct: 217 NAYRTAIASAKAAFDTAGRLGMPPMTLLNVGGGFTAGSFFDEAATVINS--ALQDYFAEY 274 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 Q K+I EPGR+ V L +I + D L+ + Y Sbjct: 275 PQLKVISEPGRYFAETVFTLAASIIGKRVRDDVREYWLNDGVFGSFLCVAYGITPPACLP 334 Query: 327 VNPAGDR--------LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + + +R + + GP C++ D I ++ D L GAY V Sbjct: 335 LALSSNRTNPTCEGAPTHMSTLFGPTCDSVDKIVEEHQLPELETNDWLVFPNMGAYSKVC 394 Query: 379 SGTYNSR 385 + +N Sbjct: 395 ATNFNGF 401 >gi|317131719|ref|YP_004091033.1| carboxynorspermidine decarboxylase [Ethanoligenens harbinense YUAN-3] gi|315469698|gb|ADU26302.1| carboxynorspermidine decarboxylase [Ethanoligenens harbinense YUAN-3] Length = 375 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 61/389 (15%), Positives = 113/389 (29%), Gaps = 23/389 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP Y + + +N D + A KA S A+ + SG Sbjct: 4 EQLSTPCYVVDESLLVRNLDILRGVMDRTGCRILLAQKAFSMYALYPLIGQYLSGTAASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + E VFS + D ++ FN S+ E Sbjct: 64 LYEARLGRE-EMDKENHVFSPGYRNEDFDEIVSLCDHIIFNSFSQLEKFKNRALRAGKSV 122 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + H+ + G+ + Sbjct: 123 GLRINPAYSTQ---EGHELYDPCAPGSRLGVTRENFRPDRLDGV-----------EGLHF 168 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + + + +Q ++ ++ GGG +H + + IH+ Sbjct: 169 HTLCEQDAAPLVRTVEAVEEQFGPWLPRMKWLNFGGG----HHITREGYDLAALEACIHR 224 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ LEPG + + G LVT V+ ++ ++ A + + + Sbjct: 225 VQETYGVQVYLEPGEAVALNAGFLVTTVLDTFRNGIDIAILDTSAACHMP--DVLEMPYR 282 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + D + GP C GD I PGD L Y V++ T+ Sbjct: 283 PPLLGAGIPDEKPYTYRLGGPTCLAGDVIGDYSFDRPLAPGDRLTFGDMAIYSMVKNNTF 342 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 N L + N ++ R + + Sbjct: 343 NGMPLPSIALRNADGDCKLL-HRFGYNDF 370 >gi|91790607|ref|YP_551559.1| Orn/DAP/Arg decarboxylase 2 [Polaromonas sp. JS666] gi|91699832|gb|ABE46661.1| Orn/DAP/Arg decarboxylase 2 [Polaromonas sp. JS666] Length = 408 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 86/356 (24%), Positives = 151/356 (42%), Gaps = 12/356 (3%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y A+ ++ A + YA+KANS+ +++TLA +G ++ S GEL Sbjct: 25 AYVYDLEALRRHSQAVVAALP-AGCELFYAIKANSDLPILRTLAPRVAGFEVSSGGELAW 83 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 P+ ++FSG GKT E+ LAL S + +VES EL+ L A + G+ AP+ Sbjct: 84 VRE-HFPSTPLIFSGPGKTDAELRLALDSDVEAIHVESLHELRRLAWLAEAAGRTAPVLL 142 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 RVN + + G K FGI + Q+ + A PG+++ G H+ S Sbjct: 143 RVNLPLPGLAATTLMMGGKATPFGIAVDQLPACLASLREAPGLRLRGFHFHLLSHQLDAA 202 Query: 209 SFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYAS--LIHQYFG 265 + + + ++ +I H++VGGG+G+ Y + + + + + Sbjct: 203 AHVELIAAYLEQVERWCGAYGLDIDHVNVGGGIGVNYRQPQQQFDLAAFGAGLQRLRASR 262 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF-------MRPTLYD 318 ++ E GR++ A G +V+ +K + + +V+ + F + Sbjct: 263 PGLPRLRFECGRYITAACGYYAMQVLDLKHTFGRDYVVARGGTHHFRTPYAQGHSHPFHV 322 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 E + +VG +C D +A + + R GDLL GAY Sbjct: 323 LPVEHWPYPWARPELRDATVHVVGQLCTPKDLLAFDAPVERVRVGDLLVFPYAGAY 378 >gi|323136936|ref|ZP_08072016.1| Orn/DAP/Arg decarboxylase 2 [Methylocystis sp. ATCC 49242] gi|322397697|gb|EFY00219.1| Orn/DAP/Arg decarboxylase 2 [Methylocystis sp. ATCC 49242] Length = 381 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 98/368 (26%), Positives = 145/368 (39%), Gaps = 21/368 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + +NYL F+ A DT V YA+KAN V+ LA LGS D S E+ Sbjct: 21 PCLVVDLDVVRENYLGFAKALP--DTRVFYAVKANPAPEVLSLLASLGSCFDTASVVEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + LAA +RI F K +I A + GI F V+SE+E++ + + A I Sbjct: 79 QTLAAGATPDRISFGNTIKKERDIARAYELGIRLFAVDSEAEVEKIARAAPGSKVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 A KFG + +A L + GV H+GSQ Sbjct: 139 CD-----GAGA-----EWPLSRKFGCVPEMATGVLEHAHRLG-LNAYGVSFHVGSQQTNP 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QYFG 265 + A K D+ + L G +Q +++GGG Y + A ++FG Sbjct: 188 RMWDGALKSAADIFRDLAERGITLQMVNLGGGFPTKYLKNVPAVKQYGNAIFRALSKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKV--ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 N + I+EPGR +V + GI+ +V IS K A+ + + + F Sbjct: 248 NRIPETIIEPGRGMVGNAGIIEAEVVLISKKSEAEGELRWVYLDIGKFSGLAETIDEMIR 307 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSG 380 I PA I GP C++ D + + + G + IE TGAY S Sbjct: 308 YPIRTPADGAPTSPCVIAGPSCDSVDVLYEKHPYDLPISLEIGAKVLIEGTGAYTTTYSA 367 Query: 381 T-YNSRLL 387 +N Sbjct: 368 VGFNGFPP 375 >gi|156847349|ref|XP_001646559.1| hypothetical protein Kpol_1055p58 [Vanderwaltozyma polyspora DSM 70294] gi|156117237|gb|EDO18701.1| hypothetical protein Kpol_1055p58 [Vanderwaltozyma polyspora DSM 70294] Length = 455 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 75/378 (19%), Positives = 134/378 (35%), Gaps = 37/378 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ +EK Y + + + YA+K N N+ +++TL LG D S+ E+ + Sbjct: 78 FFVCDLGELEKLYKNWK--LELPNVQPFYAVKCNPNEKILQTLDQLGINFDCASKSEIDK 135 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ V ERI+++ K I A + ++ EL + + + IA Sbjct: 136 VLSMNVDPERIIYANPCKASSFIRYAQTKNVLKSTFDNVEELHKIKKFHPNSELFIRIA- 194 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + K+G + + +L L + + GV H+GS Sbjct: 195 ---------TDDSTAQCRLSTKYGCELSDVENLLQAVKDLD-LNLVGVAFHVGSGASDFT 244 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 S ++A K R + + G I GG + + SS + +YF + Sbjct: 245 SLYQAVKDSRYVFDKCIEMGLPELKILDIGGG---FQFESFHESSKVVRVALEEYFPGDK 301 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL--------------------DVAM 308 K + EPGR+ V+ L + VI+ + ++ ++ + Sbjct: 302 VKFMAEPGRYFVSTALTLASNVIAKRTISNNEAMLYINDGVYGNMNCILFDHQEPIPRIL 361 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI-ALPRPGDLLY 367 YD N + + I GP C+ D I + GD Y Sbjct: 362 YHNNEFHYYDFESSTNMLKKNDVSKYPQKVSIWGPTCDGLDCITKEYYLKHDLEVGDWFY 421 Query: 368 IEKTGAYGAVQSGTYNSR 385 GAY + + +N Sbjct: 422 FPNLGAYTSTAATPFNGF 439 >gi|324507907|gb|ADY43343.1| Ornithine decarboxylase [Ascaris suum] Length = 415 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 84/388 (21%), Positives = 140/388 (36%), Gaps = 28/388 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY S + ++ + ++ YA+K N + V+K L LG GLD+ S+ E + Sbjct: 23 FYVMSVNKLVTRFMEWKRYLPRIEP--FYAVKCNDDPVVLKVLTKLGCGLDVASKAEFVQ 80 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A+ E+IV++ KT I A + GI +S EL + IA Sbjct: 81 AVKLVST-EKIVYANPVKTKSFIKRAKELGISMMTFDSVDELNKVAVLHPEARMILRIA- 138 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + KFG + G+++ G+ H+GS + Sbjct: 139 ---------TDDTQARCPLSMKFGCEPITDGPKLLKVAAELGIRVVGISFHVGSDRNDPT 189 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA--SLIHQYFGN 266 +F++ R L GH + +DVGGG ++ + +D + + N Sbjct: 190 AFYEPINQARKLFNIGLQLGHKMTILDVGGGFPGIDNASPSFINIADIVSSYIDKCFPAN 249 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK------------SADKTFVILDVAMNDFMRP 314 +II EPGRF LVT VI +K+ D ++ + Sbjct: 250 ENIRIIAEPGRFFATAPFSLVTNVIGVKRVPAERISKTGTTHHDGFMYYMNEGIYGSFNC 309 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 +D + D I GP C+ D + R + GD LY + GAY Sbjct: 310 IYFDFAKPQGKPLFDKEDEECAPCSIWGPTCDGFDQVEKRRIMRRLSTGDWLYYDDMGAY 369 Query: 375 GAVQSGTYNSRLLIPE-IMVNGSQFHII 401 + +N + + + +I Sbjct: 370 TRSAASMFNGFEKTRTYYFTDKNTWKLI 397 >gi|163794512|ref|ZP_02188483.1| Orn/DAP/Arg decarboxylase 2 [alpha proteobacterium BAL199] gi|159180236|gb|EDP64759.1| Orn/DAP/Arg decarboxylase 2 [alpha proteobacterium BAL199] Length = 417 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 87/373 (23%), Positives = 145/373 (38%), Gaps = 20/373 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + +E NY + AF +T + YA+KAN ++ LA LGS D+ S GE+ Sbjct: 58 PLLAVDLSVVEWNYRSL--AFALPETAIYYAVKANPEPELVDLLAALGSRFDVASRGEIE 115 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + A+R+ F K +I A G+ F V+ E+E++ + + A I Sbjct: 116 LCLSRGISADRLSFGNTIKKERDIAFAHAEGVRMFAVDCEAEVEKVARAAPGADVFCRIL 175 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T + KFG + + ++ A+ L GV H+GSQ + Sbjct: 176 ----------TSGTGAEWPLSRKFGCTLAKAETVLRRAADLGLT-PRGVSFHVGSQQIDL 224 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 + A L +++ G + I++GGG Y D + A ++F Sbjct: 225 SQWDIALAETAHLFERMEDQGITLDLINLGGGFPARYREDVAGAEAYGRAIYAALDRHFA 284 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 I EPGR LV D G++ +V+ + + D I Y Sbjct: 285 GRAINTIAEPGRGLVGDAGVIRAEVVLVSRKDDSEDTRWVYLDIGKFSGLAETMDEAIKY 344 Query: 326 IVNPAGD-RLHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSG- 380 V D + GP C++ D + ++ L GD + I TGAY + S Sbjct: 345 RVTTDHDGGPDGPVILAGPSCDSADILYEKAGYRLPLDLAVGDTVLILATGAYTSTYSSI 404 Query: 381 TYNSRLLIPEIMV 393 +N + + + Sbjct: 405 GFNGFPPLETVCI 417 >gi|94310055|ref|YP_583265.1| Orn/DAP/Arg decarboxylase 2 [Cupriavidus metallidurans CH34] gi|93353907|gb|ABF07996.1| diaminopimelate decarboxylase (DAP decarboxylase) [Cupriavidus metallidurans CH34] Length = 397 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 95/379 (25%), Positives = 155/379 (40%), Gaps = 16/379 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y + A + YA+KANS+ V++ L + G ++ S GE+ R Sbjct: 21 AYLYDLDDLRLRTTRLRAALPE-QCALYYAVKANSDAPVLRALLGVADGFEVASFGEIER 79 Query: 89 ALAAPVPAERIVFSG-VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 V AE + G GKT E++ AL+ G+ +VES +L L+ A G+ A + Sbjct: 80 VR--GVDAEVPIAFGGPGKTDAELEGALRLGVGLIHVESTLQLSRLDAVARRQGRCADVL 137 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R NP G +FGI + + A + T+P V++ G+ +H GS Sbjct: 138 LRANPAYGLPGATLQMGGGA-TQFGIDEALLPDVLAQSRTMPNVRVVGLHVHAGSNSLDA 196 Query: 208 ESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ--YF 264 ++ L ++LR ++ ++VGGG+GI Y + R + + Sbjct: 197 DTHLALIDRHIALAKRLRDLHGLTLEWLNVGGGIGIDYQNPERHFDWDRFCHGLAALLRE 256 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +I+ E GRF+ A G V +VI +K++ DK F +L + F P + H Sbjct: 257 TAPSTRIVFECGRFISAGCGCYVAEVIDLKRNHDKWFAVLRGGTHHFRLPVSWQHNHPFQ 316 Query: 325 YIVNPAGDRL-------HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + N D + G +C D +A + R GD + GAYG Sbjct: 317 VLPNDHWDYPFPRPVVERQPVTLCGELCTPKDVLAREVPVDRLRVGDRIAFTMAGAYGWH 376 Query: 378 QSGT-YNSRLLIPEIMVNG 395 S + S + + G Sbjct: 377 ISHHDFLSHPHPERVFIGG 395 >gi|330807503|ref|YP_004351965.1| diaminopimelate decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375611|gb|AEA66961.1| Putative ornithine decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 387 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 90/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I + Y F+ V YA+KAN +I L GS DI Sbjct: 21 ADKQETPFVVIDTAMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKDKGSNFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + ++ V +RI + K +I + G+ + +S E N + G Sbjct: 79 SIYELDKVMSRGVGPDRISYGNTIKKSRDIRYFYEKGVRLYATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 SKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD LY TGAY Sbjct: 309 MDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|229825454|ref|ZP_04451523.1| hypothetical protein GCWU000182_00814 [Abiotrophia defectiva ATCC 49176] gi|229790017|gb|EEP26131.1| hypothetical protein GCWU000182_00814 [Abiotrophia defectiva ATCC 49176] Length = 401 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 66/388 (17%), Positives = 121/388 (31%), Gaps = 18/388 (4%) Query: 19 EKLAHVV---QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 +L +TP Y IE+N D + A KA S + Sbjct: 16 PELKKAFEGLKTPCYVIDEAKIEENCKILKAVMDETGAKILLAQKAFSGFYFYPLIGKYL 75 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G E + + E +FS K D ++ FN + Sbjct: 76 AGATASGLFEAKLGAE-EMKKENHIFSPAYKDEDMEEITKICDHIIFNS------VNQLK 128 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + ++ + + +T + G + A T + G Sbjct: 129 KYKKYCVDKGVSIGIRINPEFSTQEGHEIYDP-CASGSRLGITLHTLENAITEESSLLDG 187 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 VD + + + L + + + N++ ++ GGG I +R Sbjct: 188 VDGLHFHTLCEQGA-EPLRDTLEVVYKNFGKHLKNMKWLNFGGGHHITREDYNREL---- 242 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 I + ++ LEPG + + G VT ++ S D T +ILD++ M Sbjct: 243 LIKCIKEAKALFDVEVYLEPGEAVALNAGYSVTTILDKTTSGDTTNLILDISAACHMPDV 302 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + Y + AG++ + C GD I GD+L Y Sbjct: 303 IEMPYRPPLFTSGEAGEK-KYTYRLGSCTCLAGDIIGDFSFDEEKNIGDMLIFGDMAIYS 361 Query: 376 AVQSGTYNSRLLIP-EIMVNGSQFHIIR 402 V++ T+N L ++ + I+ Sbjct: 362 FVKNNTFNGMPLPDLAVLKKDGKVENIK 389 >gi|188587896|ref|YP_001920344.1| carboxynorspermidine decarboxylase [Clostridium botulinum E3 str. Alaska E43] gi|188498177|gb|ACD51313.1| carboxynorspermidine decarboxylase [Clostridium botulinum E3 str. Alaska E43] Length = 380 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 64/397 (16%), Positives = 129/397 (32%), Gaps = 23/397 (5%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 +N+ L KL +P Y ++KN + + + A KA S + + Sbjct: 3 DNIDLNKL----PSPCYLVDERLLKKNLERLNYVQEETGANIILATKAFSMYSTFPLIGK 58 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 G+ S E R + + +FS + + ++ FN ++ +L Sbjct: 59 YLKGVTSSSLFEARLGYE-EMGKQVHIFSPAYRQDEFDEIMKYCDHIVFNSFNQWKLYK- 116 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 ++ KK R+NP+ + + + + G+ + + Sbjct: 117 DRVKTYSNKKIECGIRINPEYSEIETDIYNPCFENSRMGVTLEN----------FKIEDL 166 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G+D + + S A + ++ + + N++ I+ GGG +H Sbjct: 167 DGIDGLHFHTMCEQNSDTLA-RTIKVIDNKFGKYIKNMKWINFGGG----HHITREDYDM 221 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 +I I LEPG + + G L+ V+ + I+D + M Sbjct: 222 ETLIDVILYIKNKYDVDIYLEPGEAVALNSGFLICTVLDV-IKNGMNIAIVDTSAVCHMP 280 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 L Y + P C GD + + GD L Sbjct: 281 DVLEMPYRPHIINSGMPNQYE-YTYRLGAPTCLAGDVVGDYSFKEPLKVGDKLAFCDMAI 339 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 Y V++ T+N L + + + I + +++ Sbjct: 340 YSMVKNNTFNGINLPAIVKYSDEKGVEIIKKFGYEDF 376 >gi|289675926|ref|ZP_06496816.1| ornithine decarboxylase [Pseudomonas syringae pv. syringae FF5] gi|330895459|gb|EGH27784.1| ornithine decarboxylase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330981896|gb|EGH79999.1| ornithine decarboxylase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 387 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I K Y F+ V YA+KAN VI L GS DI Sbjct: 21 ADKQETPFVVIDTDIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKEKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + L+ V ER+ + K +I + G+ F +S E N + G Sbjct: 79 SIYELDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 SKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+++ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD +Y TGAY Sbjct: 309 MDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|297200175|ref|ZP_06917572.1| diaminopimelate decarboxylase [Streptomyces sviceus ATCC 29083] gi|197713374|gb|EDY57408.1| diaminopimelate decarboxylase [Streptomyces sviceus ATCC 29083] Length = 472 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 95/422 (22%), Positives = 150/422 (35%), Gaps = 36/422 (8%) Query: 27 TPFY-CYSTTAIEKNYLTFSNAF-----DGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 TP T I ++ AF G + +A+KA+ V++ L G G ++ Sbjct: 32 TPVVGLLDVTGIRESAAELRAAFDGVTAPGTPVLHAFAVKASPLVPVLRLLREEGIGAEV 91 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE----------SEL 130 S GEL A AA + +R V KT E+ AL GI + Sbjct: 92 ASPGELALARAAGLSPDRTVLDSPAKTPSELREALALGIAVNADNPQELDRIDGLMLPHS 151 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLP 189 A ++P+ RVNP + + ST KFG+ + + L Sbjct: 152 PKGMGGAPMAVSRSPLGIRVNPQVGGGSIGATSTATATSKFGVALRDEGAREWVVRAYLD 211 Query: 190 GVKISGVDMHIGSQID--QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 +S + H GSQ + + A R I ID+GGGL + + SD Sbjct: 212 RPWLSRLHAHTGSQGIPLSLMTQGVAETYALAEEINRRIGRPQIDTIDIGGGLPVNFASD 271 Query: 248 HRPPSSSDYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 P+ ++YA + + + + ++ E GR L+A G +V +V K + + + Sbjct: 272 VTTPTYAEYARALREAVPGLFDGRYGLVTEFGRSLLAKHGTIVARVEYAKSAGGRPIAVT 331 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRL----HIHADIVGPICETGDFIALNRKIALP 360 + R + A R + D+ GP C GD +A R + L Sbjct: 332 HAGVQVATRTVYVPGSWPLRIAAYDAKGRPRSGPEVVQDVAGPACFAGDLLAEGRALPLL 391 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV----------NGSQFHIIRPRMTFQEL 410 GD + TGAY YNS G +F +R T + Sbjct: 392 DQGDYVAALDTGAYYFAHHYAYNSLARPGVYGFAPDHSAPDRAGGVRFATVRDPQTLASI 451 Query: 411 IE 412 + Sbjct: 452 VA 453 >gi|192360578|ref|YP_001981999.1| carboxynorspermidine decarboxylase [Cellvibrio japonicus Ueda107] gi|190686743|gb|ACE84421.1| carboxynorspermidine decarboxylase [Cellvibrio japonicus Ueda107] Length = 407 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 66/392 (16%), Positives = 125/392 (31%), Gaps = 16/392 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A V +P + A+E N + V ALKA S ++ SG Sbjct: 24 AARVPSPCFVIDKAAVEDNLKILNRVQRESGVKVLGALKAFSCWSLAPLFRQYLSGTCAS 83 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E R + ++ E L + + +V + K L+ A Sbjct: 84 GLHEARLGREEFGGEVHCYSAAYKESDLEQILEIADHVLFNSVTQWQQFKNLSLAAQKRR 143 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP+ + + GIPI + A+ + Sbjct: 144 PQLAFGLRINPEHSEGDVPLYDPCAPCSRMGIPIASLD-----AAIVADPDFLQGISGFH 198 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + L + ++ +I I+ GGG +H D +++ Sbjct: 199 FHTLCQQDLPPLERTLNAVIRRFGKYFKHIHWINFGGG----HHISREDYQVDDLIAMLK 254 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + N ++ LEPG + G+LV +V+ I + + P + + + Sbjct: 255 NFQANYDLQVYLEPGEAVAIRSGVLVAEVVDITW--NTVAQAILDTSATCHMPDVLEMPY 312 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + + + L + G C GD I + G L + Y V++ T Sbjct: 313 RADILGAAMPNELAHTYRLGGMTCLAGDIIGDYSFAQPLQVGQRLVFDDMAHYTMVKTTT 372 Query: 382 YNSRLLIPEIMVNG---SQFHIIRPRMTFQEL 410 +N L I V + +IR +++ Sbjct: 373 FNGINLPS-IAVWDSRTDELEVIRQ-FGYEDF 402 >gi|66047474|ref|YP_237315.1| ornithine decarboxylase [Pseudomonas syringae pv. syringae B728a] gi|302188823|ref|ZP_07265496.1| ornithine decarboxylase [Pseudomonas syringae pv. syringae 642] gi|63258181|gb|AAY39277.1| Ornithine decarboxylase [Pseudomonas syringae pv. syringae B728a] gi|330952898|gb|EGH53158.1| ornithine decarboxylase [Pseudomonas syringae Cit 7] gi|330969561|gb|EGH69627.1| ornithine decarboxylase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 387 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I K Y F+ V YA+KAN VI L GS DI Sbjct: 21 ADKQETPFVVIDTDIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKEKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + L+ V ER+ + K +I + G+ F +S E N + G Sbjct: 79 SIYELDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 AKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+++ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD +Y TGAY Sbjct: 309 MDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|312958927|ref|ZP_07773446.1| ornithine decarboxylase [Pseudomonas fluorescens WH6] gi|311286697|gb|EFQ65259.1| ornithine decarboxylase [Pseudomonas fluorescens WH6] Length = 387 Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats. Identities = 91/373 (24%), Positives = 149/373 (39%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I + Y F+ V YA+KAN +I L GS DI Sbjct: 21 ADKQETPFVVIDTAMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKDKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + + V A+RI + K +I + G+ F+ +SE++L+ + + A Sbjct: 79 SIYELDKVMDRGVSADRISYGNTIKKSKDIRYFYEKGVRLFSTDSEADLRNIAKAAPGSK 138 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I + + KFG L A L V G+ H+G Sbjct: 139 VYGRILTEGSTTAD---------WPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ +++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIHLKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD LY TGAY Sbjct: 309 MDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|90021243|ref|YP_527070.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Saccharophagus degradans 2-40] gi|89950843|gb|ABD80858.1| carboxynorspermidine decarboxylase [Saccharophagus degradans 2-40] Length = 387 Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 125/389 (32%), Gaps = 20/389 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P Y +E+N V ALKA S ++ + +G+ Sbjct: 12 RVPSPCYVVDKAKLEQNLRILDYVQQQSGAKVLLALKAFSMFSLAPLVMKYLNGVCASGL 71 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL-NQRAVSLGK 142 E + E +S + + ++ S FN ++ E A Sbjct: 72 NEAKLGRE-EFGKEVHTYSAAFRPQEFEEILAVSDHLVFNSFNQWETYKARCLAAQQDRP 130 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 R+NP+ + + GIPI Q + + + Sbjct: 131 HLEFGLRINPEHSEGETPMYDPCAPCSRMGIPIKQFANKDLHGI-----------SGLHF 179 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + L + ++ +++ ++ GGG I ++ Sbjct: 180 HTLCEQDFAPLARTLDAVEEKFGDILPSLKWVNFGGGHHITRAD----YQVDALIERLNA 235 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + + G+ V++V+ + ILD + M + Y Sbjct: 236 FQTKYDVQVYLEPGEAIALNAGVFVSEVLDTL-NNGMDIAILDASATCHMPDVIEMPYRP 294 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 G+R H + GP C GD I + GD + E Y V++ T+ Sbjct: 295 RITGAGEPGERNH-TYRLGGPSCLAGDVIGDYSFSNPLQIGDRMTFEDMAIYTMVKNTTF 353 Query: 383 NSRLLIPEIMVNGSQFHI-IRPRMTFQEL 410 N L + + + + + +++ Sbjct: 354 NGINLPSICVWDSTTDELEVIKNFGYEDF 382 >gi|56461100|ref|YP_156381.1| carboxynorspermidine decarboxylase [Idiomarina loihiensis L2TR] gi|56180110|gb|AAV82832.1| Carboxynorspermidine decarboxylase [Idiomarina loihiensis L2TR] Length = 377 Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats. Identities = 60/388 (15%), Positives = 117/388 (30%), Gaps = 24/388 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + +P Y + KN + + ALK + + + G S Sbjct: 8 EIPSPCYVLDEKLLRKNLELMQKVQEQSGADIILALKGYAMWSAFPLIRQYLKGCTASSV 67 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E + A E ++ K D +L FN S+ Sbjct: 68 WEAKLAAE-EFSREVHAYAPAYKQEDIDELLPLVNHLSFNSVSQWHKYREQT-------- 118 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + ++ + E + P L AS L ++GV+ Sbjct: 119 ------ADAGVSVGLRINPEHQEAETELYDPSAPGSRLGIRASELNQQDLTGVEGLHVHN 172 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + +SF + L + + ++ +++GGG + + + Sbjct: 173 LCECDSFA-LERTLDAVENRFGEQLKQMKWLNLGGGHLMTRQG----YDVDHLIKQLKRL 227 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ILEPG + G LV +V+ I ++ + + L P + + + Sbjct: 228 RETYDLQVILEPGSAVAWQTGPLVCEVVDIVENQGQ--IALLDISATAHMPDVLEMPYRP 285 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + G C GD I GD L E Y V++ +N Sbjct: 286 VITGAGLPAEKAFSYRLGGNSCLAGDVIGEYSFDQPLAVGDRLVFEDMMHYTMVKTSFFN 345 Query: 384 SRLLIPE-IMVNGSQFHIIRPRMTFQEL 410 I+ QF +R ++++ Sbjct: 346 GVQHPAIGILRENGQFDCVRQ-FSYEDF 372 >gi|50420693|ref|XP_458883.1| DEHA2D09614p [Debaryomyces hansenii CBS767] gi|49654550|emb|CAG87035.1| DEHA2D09614p [Debaryomyces hansenii] Length = 450 Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats. Identities = 80/406 (19%), Positives = 142/406 (34%), Gaps = 45/406 (11%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + ++Y+ + + YA+K N++ +VIK L LG+ D S+ E+ Sbjct: 64 FFVVDLGEVYRSYMKWKETLP--NVHAHYAVKCNTDLSVIKLLGQLGANFDCASKNEIDI 121 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L +RIV++ KT I A S + V++ EL L++ G IA Sbjct: 122 VLGLGFSPDRIVYANPCKTNSYIRYANDSNVNLTTVDNPQELYKLHKYHPECGILLRIA- 180 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + + KFG + + + G+ + GV H+GS + Sbjct: 181 ---------TDDETAQCRLSTKFGCSVDTAVNELLPLAAKLGLNVRGVAFHVGSGAKDFD 231 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHID---VGGGLGIAYHSDHRPPSSSDY-ASLIHQYF 264 S H+A + R + + + ++ +GGG + Y Sbjct: 232 SIHEAVRDSRFIFDKGIDEYGYGKTMNILDIGGGFEMETFDKSSAMVKLSLEKYFSSDYC 291 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISI-----------------KKSADKTFVILDVA 307 + K I EPGR +V+ L +I+ + + + Sbjct: 292 SSQNIKFIAEPGRLMVSKAFTLAAHIIARRDLPRSLKESNDIEAMLYINDGVYGNMNCIL 351 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIH-ADIVGPICETGDFIALNRKI-ALPRPGDL 365 + + Y DR H I GP C+ D ++ + GD Sbjct: 352 FDHQNPVPHVLTHKNSLYYNEQVSDRTTKHQFSIWGPTCDGLDCVSNRSALYHNVEVGDW 411 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPR-MTFQEL 410 LY GAY + + ++N ++ +IR F EL Sbjct: 412 LYFPDLGAYTSAATTSFNGF---------KNKAQVIRVASEDFSEL 448 >gi|325679833|ref|ZP_08159404.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Ruminococcus albus 8] gi|324108503|gb|EGC02748.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Ruminococcus albus 8] Length = 411 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 99/402 (24%), Positives = 169/402 (42%), Gaps = 25/402 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 A+N+ A TP Y + T K S AF G +CY++KAN ++ L Sbjct: 20 ADNIRHSSAAEKFGTPCYLFDTDVFAKRAADVSAAF-GERVGLCYSIKANP--FLLAALP 76 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 + +++ S GEL P ++I+FSGV KT +++ A G+ F ES ++ Sbjct: 77 EVFRYIEVCSPGELSICEKIGAPLDKIIFSGVNKTEEDVARAYADGVAIFTAESRLHVRL 136 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 +N AV G + + R+ +FG+ + + A+ GV Sbjct: 137 INNCAVKNGGRVKLILRLAHGS---------------QFGMDKADLTDIIAHREQFAGVD 181 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAYHSDHRPP 251 I G+ G+Q ++++ K +LL + Q+L S G QHI+ G GLG+ Y+ D Sbjct: 182 IIGLHYFTGTQKTKVKTIAKELELLDEFCQELESGYGFKAQHIEYGTGLGVEYYKDFTED 241 Query: 252 SSSDYASLIHQYFGNL--QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 S + + + + +E GRF A G +TKV+ IK + D +VI D +N Sbjct: 242 SDLALLAEAAEVVKAFAEKYPLTVEMGRFFAAQCGSYLTKVMDIKTTNDINYVICDGGIN 301 Query: 310 DFMRP-TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 +VN + G +C T D + + + GD+L Sbjct: 302 HLNYYGQNMAMKVPPISLVNGTDGENTSDYCLCGSLCTTADILVRKVTLPELKRGDILAF 361 Query: 369 EKTGAYGAVQS-GTYNSRLLIPEIMVNGSQ-FHIIRP-RMTF 407 +K GAY + + SR + + + ++ ++R T+ Sbjct: 362 DKCGAYSVAEGISAFLSRAMPKVALYSKAEGLQLVRELTETY 403 >gi|317038522|ref|XP_001401610.2| ornithine decarboxylase [Aspergillus niger CBS 513.88] Length = 454 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 81/344 (23%), Positives = 132/344 (38%), Gaps = 32/344 (9%) Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+K N + +++ +A LG+G D S+ E+ AL V RI+++ KT + A Q Sbjct: 106 AVKCNPDPEILRLMAKLGNGFDCASKAEIDMALETGVDPSRIIYAQPCKTKSYLRYAAQV 165 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G+ ++ EL + I T S + KFG + Sbjct: 166 GVKQMTFDNADELYKIKANYPDAELYLRIL----------TDDSNSLCQFSMKFGASLDV 215 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 L A L +K+ GV H+GS + ++F KA + R + Q GH + +DVG Sbjct: 216 ARQLLELAHQLE-LKVVGVSFHVGSGAEDPKAFLKAVQDARLVFDQAAEIGHELHTLDVG 274 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GG S + + ++I EPGR+ VA+ L +I+ ++ Sbjct: 275 GGFSQDTFEKFAGVLSEAL-----ETYFPPNIRVIAEPGRYYVANAFTLAANIIARREVR 329 Query: 298 DKTFVILDVAM-------NDFMRPTLYDAYHEINYIVNPAGDRLH--------IHADIVG 342 D D M ++D H + ++ A + I G Sbjct: 330 DPEDPANDAYMLYLNDGVYGNFSNIIFDHQHPVAQVLTCASAANSPYAATSGGVTYSIWG 389 Query: 343 PICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 P C+ D I+ + L GD LY E+ GAY + +N Sbjct: 390 PTCDGIDVISKRIALPALLEVGDWLYFEEMGAYTKCSATRFNGF 433 >gi|222832227|gb|EEE70704.1| predicted protein [Populus trichocarpa] Length = 124 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 3/117 (2%) Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 F I+D AMND RP +Y+A+H I + + D+VGP+CE+GD++ +R +A Sbjct: 8 NFCIVDAAMNDLARPAMYEAFHRIEPVAPRNDAG--VMYDVVGPVCESGDWLGRDRTLA- 64 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + GDLL + GAYG V S YN+R E+MV+G H++R R +L + + Sbjct: 65 VQAGDLLAVMSAGAYGFVMSSNYNTRGRAAEVMVDGDTVHLVRERELPADLFRNERL 121 >gi|300787100|ref|YP_003767391.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] gi|299796614|gb|ADJ46989.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32] Length = 442 Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats. Identities = 91/411 (22%), Positives = 149/411 (36%), Gaps = 20/411 (4%) Query: 32 YSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 + + + AF + A KA +++ L LG ++ S GE A Sbjct: 34 VDLATVREAVEDLTEAFAPLGRVQHTVAAKACGLAPLLRFLGDLGIDAEVASPGETAVAE 93 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 AA + R+V KT E+ AL G N ++ EL L++ + ++ + R+ Sbjct: 94 AAGLRGPRLVLDSPAKTTAELAHALAEGTA-VNADNFQELARLDRLVGAAPPRSVLGLRI 152 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 NP + A ST KFGIP+ A + +H+ Sbjct: 153 NPQVGAGRIGDTSTATAASKFGIPLRDN-GSRALLREAFTRRPWLTRLHVHVGSQGCPPE 211 Query: 211 HKAFKLLRDLTQQLRSN----GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG- 265 A + N + +D+GGGL + + SD P+ + Y + + Sbjct: 212 LMADGVAAAHELAEEINAEAGYRQVTSLDLGGGLPVDFTSDAPGPTYAGYVATLLARVPS 271 Query: 266 --NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + + + E GR L+A G LV+ V K + + + R L + + Sbjct: 272 LGDGRYAFVTEFGRSLLAKSGFLVSTVEYTKVAGGRHIAVTHAGGQVAARTVLQPEHWPL 331 Query: 324 NYIV----NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + DI GP+C GD +A R + L PGDL+ TGAY Sbjct: 332 RIGAFDATGVPKTGPEVAQDIAGPLCFAGDLLARERPLPLLEPGDLVVAHDTGAYYFGAH 391 Query: 380 GTYNSRLLIPEIMV----NGS-QFHIIRPRMTFQELIELDSIPAWLQKTPK 425 YN+ G +F +R T EL+ D+ +L P+ Sbjct: 392 YAYNTLPRPAVYGFTVSGRGDVEFTPLRRAQTLDELVA-DAGGEFLGARPE 441 >gi|297472150|ref|XP_002685706.1| PREDICTED: ornithine decarboxylase 1-like [Bos taurus] gi|296490255|gb|DAA32368.1| ornithine decarboxylase 1-like [Bos taurus] Length = 683 Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats. Identities = 80/363 (22%), Positives = 128/363 (35%), Gaps = 23/363 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F + + F A + Y +K NS+ +++ LA LG+ D S+GEL + Sbjct: 69 FMVADLDVLASRHQVFRQALPRVSP--FYVVKCNSSPWMLRVLAALGTSFDCSSQGELEQ 126 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RIV++ K + I A G+ SE EL + Q A + Sbjct: 127 VLDLGVAPSRIVYANACKPVSHIRFASLHGVKLLVFNSEEELIKVAQHHPG----ARLVL 182 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 D ++ KFG + L A L + G H+GS+ Sbjct: 183 WWTQDSDS-------IFPLSSKFGARLEVCEHLLESARDLGLA-VVGTSFHVGSRCQTPR 234 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY--ASLIHQYFGN 266 +F KA R + + S GH++ +D+ GG SD + A+L + Sbjct: 235 NFMKAIVDCRRVFEMGSSIGHDMSLLDIRGGFSREEGSDPEFEEVAGVINAALAQDFPEG 294 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKT------FVILDVAMNDFMRPTLYDAY 320 ++I EPGRF V +I+ K + + + D F Sbjct: 295 SGVEVIAEPGRFYATFVCTTAVNIIAKKAVLEPRGRRKLLYYLNDGHYGTFRIFPRESEP 354 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDF-IALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + + + GP C+ D ++ GD L GAY +V S Sbjct: 355 RMPIMVKELSPKLSLFPCTLFGPTCDAFDKLFLKEVQLPELDVGDWLVFPFMGAYTSVLS 414 Query: 380 GTY 382 T+ Sbjct: 415 STF 417 >gi|194664373|ref|XP_610618.4| PREDICTED: ornithine decarboxylase 1-like [Bos taurus] Length = 441 Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats. Identities = 80/363 (22%), Positives = 128/363 (35%), Gaps = 23/363 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F + + F A + Y +K NS+ +++ LA LG+ D S+GEL + Sbjct: 69 FMVADLDVLASRHQVFRQALPRVSP--FYVVKCNSSPWMLRVLAALGTSFDCSSQGELEQ 126 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RIV++ K + I A G+ SE EL + Q A + Sbjct: 127 VLDLGVAPSRIVYANACKPVSHIRFASLHGVKLLVFNSEEELIKVAQHHPG----ARLVL 182 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 D ++ KFG + L A L + G H+GS+ Sbjct: 183 WWTQDSDS-------IFPLSSKFGARLEVCEHLLESARDLGLA-VVGTSFHVGSRCQTPR 234 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY--ASLIHQYFGN 266 +F KA R + + S GH++ +D+ GG SD + A+L + Sbjct: 235 NFMKAIVDCRRVFEMGSSIGHDMSLLDIRGGFSREEGSDPEFEEVAGVINAALAQDFPEG 294 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKT------FVILDVAMNDFMRPTLYDAY 320 ++I EPGRF V +I+ K + + + D F Sbjct: 295 SGVEVIAEPGRFYATFVCTTAVNIIAKKAVLEPRGRRKLLYYLNDGHYGTFRIFPRESEP 354 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDF-IALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + + + GP C+ D ++ GD L GAY +V S Sbjct: 355 RMPIMVKELSPKLSLFPCTLFGPTCDAFDKLFLKEVQLPELDVGDWLVFPFMGAYTSVLS 414 Query: 380 GTY 382 T+ Sbjct: 415 STF 417 >gi|237726405|ref|ZP_04556886.1| diaminopimelate decarboxylase [Bacteroides sp. D4] gi|229434931|gb|EEO45008.1| diaminopimelate decarboxylase [Bacteroides dorei 5_1_36/D4] Length = 389 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 77/394 (19%), Positives = 150/394 (38%), Gaps = 12/394 (3%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP+Y + N+ + AF+ + + Y+ K N+ ++ + G+ ++VS Sbjct: 4 TPYYLLDEDKLLSNFESMKRAFEKLWPNFKIAYSYKTNNLPWLVNWMKEHGALAEVVSYP 63 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E + A IV++G K + +D A+ +G N+++ SE++ L + S K Sbjct: 64 EYKLAQRVGNKISNIVYNGPNKNFEGLDEAVLNGAI-VNLDNFSEIEHLLLFSSSKRAKI 122 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R+N D+ + + GK+ +FG I A + +S V + Sbjct: 123 KVGLRINFDLESYCPNETIPGKEPGRFGFNIENGDLQKAISLLSSIPNVSIV--GLHGHH 180 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-SDYASLIHQY 263 K FK + + Q+ ++ I+++D+GG L S ++ Y Sbjct: 181 STRTKSLKIFKTIAEQMCQMANHLSKIEYLDMGGCLFGDKPGAPTFDEYASTIVNVFKHY 240 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + +I+EPG LVA V V+++K V D ++ + Sbjct: 241 QIPSKTLLIMEPGAALVASPFSYVCSVLAVKDIQTTRLVFTDGSVKHIAPQMNAVRFMSS 300 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + + G C D + GD + I TGAY S + Sbjct: 301 VQTTSTKIIARQV---VSGYTCIENDRFLELIDCQELQIGDTIQIYNTGAYSLSLSPLFI 357 Query: 384 SRLLIPEIMVNGS-QFHIIRPRMTFQELIELDSI 416 P+++V + I+R E ++ + + Sbjct: 358 EYY--PKVIVKNGLRHKIVREAWDIDEFMQKNIL 389 >gi|157952582|ref|YP_001497474.1| hypothetical protein NY2A_B278R [Paramecium bursaria Chlorella virus NY2A] gi|155122809|gb|ABT14677.1| hypothetical protein NY2A_B278R [Paramecium bursaria Chlorella virus NY2A] Length = 372 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 81/359 (22%), Positives = 144/359 (40%), Gaps = 15/359 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY S +E ++ F YA+K N++ ++KT+ D S E+++ Sbjct: 19 FYVSSPKIVENLIDQWNILFPR--VTPHYAVKCNNDDVLLKTMCDKNVNFDCASSYEIKK 76 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V RI+F+ K+I+++ A G+ +S EL +++ I Sbjct: 77 VMRLGVDPSRIIFAHTMKSIEDLIFAKDQGVDIATFDSSFELDKIHEFHPRCKMILRIRC 136 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +T + +KFG ++ L YA L +++ G+ H+GS E Sbjct: 137 D----------DPNATVQLGNKFGANEDEVEHLLEYAKNL-NIEVVGISFHVGSGSRNPE 185 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL-IHQYFGNL 267 ++++A K +D S GH +D+GGGL D S+Y + I+ +F + Sbjct: 186 AYYRAIKASKDAFDTAISVGHTPYILDIGGGLHADIDEDEISTYMSEYINDAINDFFPDD 245 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 II EPGRF L T+VI + + + +++ I +V Sbjct: 246 TITIIAEPGRFFAEHYSSLATQVIGKRVRDGLYEYFFNESTYAGFSNVIFEKSVPIPKLV 305 Query: 328 NPAGDRLH-IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D + + + G C+ D I N + GD + + GAY V ++N Sbjct: 306 RHVPDEEEYVPSVLYGCTCDGIDVINQNIALPEMNVGDWVVFDSWGAYTNVLVTSFNGF 364 >gi|311696676|gb|ADP99549.1| ornithine decarboxylase [marine bacterium HP15] Length = 391 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 86/378 (22%), Positives = 150/378 (39%), Gaps = 19/378 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ A +TPF T I++ Y F V YA+KAN ++ L G+ Sbjct: 20 RIKDFADGKETPFVVIDTATIDRQYDELVEGFPY--AKVYYAVKANPAPQILTMLRDKGA 77 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI S EL + +A V ERI + K +I + G+ F +SE++L+ + + Sbjct: 78 SFDIASVYELDKVMALGVTGERISYGNTIKKAKDIRTFYEKGVRMFATDSEADLRNIAKA 137 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + T ++ + + A L GV Sbjct: 138 APGSKVYVRI-------LTEGTLTADWPLSRKFGCQTDMAMDLLILARDLGL---VPYGV 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS- 254 H+GSQ +I ++ A ++ + ++L+ ++ I++GGG Y + Sbjct: 188 SFHVGSQQREIGAWDAALNKVKVIFERLKEEDGIELKMINMGGGFPANYITRTNELKVYA 247 Query: 255 -DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + A +H+ FG +II+EPGR L+++ G+LV++V+ I + + Sbjct: 248 EEIARFLHEDFGAELPEIIIEPGRSLISNAGVLVSEVVLISRKSRTALHRWVFTDVGKFS 307 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEK 370 + I + + I GP C++ D + + K LP GD +Y Sbjct: 308 GLIETLDEAIKFPIWTEKVGEGEDCVIAGPTCDSADIMYEHHKYPLPLNLAIGDRMYWLS 367 Query: 371 TGAYGAVQSG-TYNSRLL 387 TGAY S +N Sbjct: 368 TGAYTTTYSAIEFNGFPP 385 >gi|328882870|emb|CCA56109.1| Diaminopimelate decarboxylase [Streptomyces venezuelae ATCC 10712] Length = 441 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 93/378 (24%), Positives = 154/378 (40%), Gaps = 16/378 (4%) Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 + +A+KA V++ L G G+++ S GEL A AA VP V KT Sbjct: 53 EAHVLHAFAVKAAPLVPVLRLLHAAGLGVEVASPGELALARAAGVPPTHTVLDSPAKTPA 112 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 E+ AL GI + EL L+ S +P+ RVNP + A + +ST Sbjct: 113 ELRQALALGIAVNADNLQ-ELARLDALVASAPTASPLGLRVNPQVGAGSIGALSTATATS 171 Query: 170 KFGIPIHQIHSLYAYAS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN- 227 KFG+ + + L ++ + H GSQ + + L +++ Sbjct: 172 KFGVALRDEGARKTVVQAYLERPWLTRLHTHTGSQGVPLALMAAGVGEVYALAEEINRAA 231 Query: 228 -GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF---GNLQCKIILEPGRFLVADV 283 I +D+GGGL + + SD P+ ++YA L+ + + +++ E GR L+A Sbjct: 232 GRQQIDTLDIGGGLPVNFASDEETPTYAEYARLLADTVPGLFDGRYRLVTEFGRSLLAKH 291 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI----HAD 339 G ++ +V K S + + + R + + + R D Sbjct: 292 GTVLARVEYTKTSGGRPIAVTHAGVQLATRTVYAPESWPLRVLAYDSEGRPRTGDVTVQD 351 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE--IMVNGSQ 397 + GP C GD +A R + L PGD++ + TGAY YNS L P V+ Sbjct: 352 VAGPACFAGDLLATGRALPLLHPGDVVAVPDTGAYYFSHHYAYNSLLRPPVHGFTVDEDG 411 Query: 398 FHI---IRPRMTFQELIE 412 + +R T E++ Sbjct: 412 AVVFAAVRKPQTLAEIVA 429 >gi|146343068|ref|YP_001208116.1| putative ornithine decarboxylase [Bradyrhizobium sp. ORS278] gi|146195874|emb|CAL79901.1| putative ornithine decarboxylase [Bradyrhizobium sp. ORS278] Length = 380 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 88/367 (23%), Positives = 148/367 (40%), Gaps = 20/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY+ F+ A D+ V YA+KAN V+ LA LGS D + E+ Sbjct: 21 PCLVVDLDIVRDNYMNFARALP--DSRVFYAVKANPAPEVLSLLASLGSSFDTATVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +RI + K +I A GI F V+ +E++ +++ A I Sbjct: 79 MALAAGATPDRISYGNTIKKERDIARAYALGIRLFAVDCAAEVEKISRAAPGAKVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 139 YDCAGA----------EWPLSRKFGCDPEMAVEVLDLAKRLG-LEPCGISFHVGSQQRKV 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A + + + G N+ +++GGG Y D P + ++FG Sbjct: 188 KAWDRALAMASTVFRDCAERGINLSMVNMGGGFPTKYLKDVPPVVQYGRSIFRALRKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + GI+ ++V+ I K +D+ + I Y Sbjct: 248 NQIPETIIEPGRGMVGNAGIIESEVVLISKKSDEDELRWVYLDIGKFGGLAETMDESIRY 307 Query: 326 IVNPAGD-RLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + + + GP C++ D + LP GD + IE TGAY + S Sbjct: 308 AIRTPHEGAETTPCVLAGPTCDSADVMYEKLPYPLPVTLSIGDKVLIEGTGAYTSTYSSV 367 Query: 382 -YNSRLL 387 +N Sbjct: 368 AFNGIPP 374 >gi|330892496|gb|EGH25157.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. mori str. 301020] Length = 375 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 80/353 (22%), Positives = 139/353 (39%), Gaps = 8/353 (2%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + Y A++++ A + YA+KANS +++TLA L SG +I S GE+ R Sbjct: 25 AFVYDLDALQQHVTDVMAALPAA-VELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A + VFSG GK ++ AL + + ++ES +E+ L A G+ P+ Sbjct: 84 V-MACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAEETGRVQPVFL 142 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+NP + A K++ FGI + + + + G +H S +E Sbjct: 143 RINPQLPAAQSSKLAMAGSATPFGIDETDLAEAIRRVDSASHLTLKGFHVHAMSHQMSVE 202 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHI--DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + Q+ ++ + + GG + + + + + G Sbjct: 203 RHEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRLCRYLEKRLGE 262 Query: 267 LQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE-- 322 + I EPGRF+ A G +V+ K S + F++ + F P H Sbjct: 263 QRDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQGHDHPVI 322 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 G +VG +C D ++ + + GDLL + GAYG Sbjct: 323 HVPCAPATGASEEQAYTVVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYG 375 >gi|198423004|ref|XP_002120700.1| PREDICTED: similar to ornithine decarboxylase 1 [Ciona intestinalis] Length = 437 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 86/383 (22%), Positives = 149/383 (38%), Gaps = 26/383 (6%) Query: 13 AENVSLEKLAHVV----------QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 AE S +KLA + FY I +N ++ + YA+K N Sbjct: 23 AEGDSRKKLAKTFVCSQNKLKEWDSSFYIGDLGQIVRNLQLWTKHMPQI--RPYYAMKCN 80 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 +Q V++ LA LG G D S+ E+ AL V + I+F+ K I+ A +SG+ Sbjct: 81 PSQPVVQLLASLGVGFDCASKFEIESALKCGVKPDDIIFAVPCKMSSHIEYACRSGVRTM 140 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ++ EL + + + + + K DKFG + + L Sbjct: 141 TFDNADELHKIKRIHSTGRLLMRLDV----------TEFERGIKFGDKFGASMPEARKLI 190 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 L + + G+ H GS D E+ + + L SN +++ ID+GGG Sbjct: 191 LLCKQLD-LNLVGICFHPGSGSDSSEATRNCLQKCKKLYDFATSNEVHLKIIDIGGGF-- 247 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 + S + A++ + +I EPGRF V + VT V D+ Sbjct: 248 VCGENFIEISETVTATVDKLFPPQTGVTVIAEPGRFFVKNAFAFVTSVHGKALVNDRAKY 307 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD-IVGPICETGDFIALNRKIALPR 361 + + TL++ + I ++ + ++A + GP D + N + R Sbjct: 308 YIGAGVFSTFCMTLFEEFERIPESLSRKAENCEVYASNVYGPTGAGVDIVLNNIMLPEAR 367 Query: 362 PGDLLYIEKTGAYGAVQSGTYNS 384 GD + + GAY ++ S +N Sbjct: 368 IGDWWFFDNMGAYSSLVSIGFNG 390 >gi|306821216|ref|ZP_07454830.1| diaminopimelate decarboxylase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550728|gb|EFM38705.1| diaminopimelate decarboxylase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 394 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 99/391 (25%), Positives = 159/391 (40%), Gaps = 38/391 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y IE N NA D Y++KAN V+KT++ G G D S E+ Sbjct: 15 PCYVYEKDIIESNCKQLQNAVK--DAEFLYSIKANPFLPVVKTISSQGIGSDAASSNEVL 72 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + A +PAE I +S GKT D+ G F +S EL+ L Q++ + Sbjct: 73 LSEQAQIPAEMIYYSAPGKTE--QDIIKTWGKCTFIADSFHELELLEQKSAQENTTLEVG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R++P+ KFGI + + P + ++G+ +H+ SQI Sbjct: 131 VRIHPNF-----TMFEGSIVSSKFGIDEDLL---FDTKWNYPHLTLTGIHVHLQSQILDS 182 Query: 208 ESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSS-----SDYASLIH 261 + + +L +++ S H NI+ I+ G G+GI Y + P + + Sbjct: 183 SILSRYYHNCYNLAEKVNSLPHANIKFINFGSGIGIVYDEINEKPLNISEIGQSIGEIAK 242 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL----- 316 + L K+ LE GRFL + G T +I K S KT+V++ A+N F+RPT+ Sbjct: 243 KNKEGLNAKLFLETGRFLTCNAGTYFTPIIDRKISRGKTYVVVQNALNGFLRPTMSELLK 302 Query: 317 --------------YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 + D+VG +C D +A + + Sbjct: 303 KTLGQDSSIAPQEPFFTSVNQCNFSIIENTNEVEVVDVVGTLCTALDVMAKDISLPKSDI 362 Query: 363 GDLLYIEKTGAYGAVQSG-TYNSRLLIPEIM 392 GD+L + G+Y S ++S L E + Sbjct: 363 GDVLAVSNAGSYAFTLSPFAFSSHELPKEYL 393 >gi|255658390|ref|ZP_05403799.1| carboxynorspermidine decarboxylase [Mitsuokella multacida DSM 20544] gi|260849723|gb|EEX69730.1| carboxynorspermidine decarboxylase [Mitsuokella multacida DSM 20544] Length = 384 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 61/390 (15%), Positives = 110/390 (28%), Gaps = 26/390 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V TP Y + +E N + V A K S +A SG Sbjct: 14 EVPTPSYVIAKDLLEHNLRILHEVEESTGAHVLLAQKCFSMYHYYPLIAEYLSGTTASGL 73 Query: 84 GE--LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E L E VFS K + +L G FN ++ + Sbjct: 74 YEARLGHEEMGKFGKETHVFSPAYKEAEFAELTKICGHIVFNSFAQWKKFGPAA------ 127 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + ++ +E P L + G++ Sbjct: 128 --------LAAGVSCGLRINPERSTQEHAIYDPCAAGSRLGVRLRDFDESALEGLEGLHF 179 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + + A L + + ++ I+ GGG I I Sbjct: 180 HTLCEQGADALAV-TLEAVEAKFGKYLPQMKWINFGGGHHITKPGYDIAL----LKKCIR 234 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +EPG + + G LV +V+ I++ + A + P + + + Sbjct: 235 HMQQEYGLTVYIEPGEAVALNAGFLVAEVLDIQQENAIAILDTSAACHM---PDVIEMPY 291 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + + GP C GD I GD + Y V++ T Sbjct: 292 RPPVLGSGEPGEKAHTYTFAGPTCLAGDTIGTYSFDEPLAIGDRIVFCDMAIYTMVKNNT 351 Query: 382 YNSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 +N L I + + +R +++ Sbjct: 352 FNGMPLPAIIASDEDGSWQTVRQ-FGYEDF 380 >gi|77457028|ref|YP_346533.1| ornithine decarboxylase [Pseudomonas fluorescens Pf0-1] gi|77381031|gb|ABA72544.1| putative ornithine decarboxylase [Pseudomonas fluorescens Pf0-1] Length = 387 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 145/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I + Y F+ V YA+KAN +I L GS DI Sbjct: 21 ADKQETPFVVIDTAMIAQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + L+ V A++I + K +I + G+ F +S E N + G Sbjct: 79 SIYELDKVLSRGVSADQISYGNTIKKSKDIRYFYEKGVRLFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 AKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ +++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIHLKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD LY TGAY Sbjct: 309 MDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|296425569|ref|XP_002842313.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638576|emb|CAZ86504.1| unnamed protein product [Tuber melanosporum] Length = 438 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 74/373 (19%), Positives = 133/373 (35%), Gaps = 34/373 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + ++ + ++ YA+K N ++ V+ LA LG+G D S+ E+++ Sbjct: 64 FFVADLGEVYRQHMRWKINLPRVEP--FYAVKCNGDEKVLSLLAALGTGFDCASKAEIQQ 121 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ KT I A + + ++ EL + + I Sbjct: 122 VLNLGVNPSRIIYANPCKTASYIRYAAEENVRMMTFDNAEELYKVKKFFPHARLFLRIC- 180 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + K+G P+ L A L + + GV H+GS Sbjct: 181 ---------TDDSKALCRLSLKYGAPLDSTRHLLELAKDL-RLDVVGVSFHVGSGSYDPT 230 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F A + R + + G++++ +DVGGG G + + Sbjct: 231 AFLTAVQDARRVFNEATEVGYDLRTLDVGGGYGNDNFEEIAAVLGPAI-----DEYFPPS 285 Query: 269 CKIILEPGRFLV------ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++I EPGR+ V A I V + L+ + L+D Sbjct: 286 VRVIAEPGRYYVSSAFTIATHIIARRTVQEDGSRNPSYMLYLNDGVYGNFSGILFDHQKP 345 Query: 323 INYIVNPAG---------DRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTG 372 + ++ D I GP C+ D I+ + GD LY G Sbjct: 346 VPKVLKRGDKYFFGSTPTDSQLTKYSIWGPTCDGIDCISSFSNLPEVLEAGDWLYFSDMG 405 Query: 373 AYGAVQSGTYNSR 385 AY + +N Sbjct: 406 AYSKCSATKFNGF 418 >gi|237801422|ref|ZP_04589883.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. oryzae str. 1_6] gi|330873453|gb|EGH07602.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965275|gb|EGH65535.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331024281|gb|EGI04338.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 387 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 91/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I K Y F+ V YA+KAN VI L GS DI Sbjct: 21 ADKQETPFVVIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + ++ V ER+ + K +I + G+ F +S E N + G Sbjct: 79 SIYELDKVMSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 SKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+++ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD +Y TGAY Sbjct: 309 MDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|225018468|ref|ZP_03707660.1| hypothetical protein CLOSTMETH_02415 [Clostridium methylpentosum DSM 5476] gi|224948777|gb|EEG29986.1| hypothetical protein CLOSTMETH_02415 [Clostridium methylpentosum DSM 5476] Length = 378 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 60/379 (15%), Positives = 112/379 (29%), Gaps = 25/379 (6%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP+Y + +N + + + A KA S ++ + G E Sbjct: 12 PTPYYAVDRNLLIRNLELLRSVKERTGCRILLAQKAFSMYSLYPLIGEYLDGTTASGLFE 71 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 R + E +FS + + ++ G FN + + A Sbjct: 72 ARLGFE-EMGKENHIFSPAYREEEFEEILSLCGHIVFNSFEQWDKYRKRALAAGKQCGIR 130 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I + +A + + + + Sbjct: 131 INPECSTQDHAIYDPCSPGSRLGVTIDNFRPDLLDGISGLHFHTLCE------------- 177 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 ++ + L + ++ + ++ GGG I + I + Sbjct: 178 --QNADALERTLDAVEEKFGPYLSQMNWLNFGGGHHITRAD----YNVEKLIRCIQRMQQ 231 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 Q ++ LEPG + + G LV+ V+ I ++ ++ A EI Sbjct: 232 TYQLEVYLEPGEAVALNTGFLVSTVLEIGRNGIDIAILDTSAACHMPDVLEMPYRPEIIG 291 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 N D + GP C GD I + GD L Y V++ T+N Sbjct: 292 AGNL--DEKPYTYRLGGPTCLAGDIIGDYSFDRPLKVGDRLVFCDMAHYSMVKNNTFNGI 349 Query: 386 LLIPEIMVNG--SQFHIIR 402 L I V G +Q ++R Sbjct: 350 NLPS-IAVTGANNQLELVR 367 >gi|302386984|ref|YP_003822806.1| Orn/DAP/Arg decarboxylase 2 [Clostridium saccharolyticum WM1] gi|302197612|gb|ADL05183.1| Orn/DAP/Arg decarboxylase 2 [Clostridium saccharolyticum WM1] Length = 390 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 76/384 (19%), Positives = 137/384 (35%), Gaps = 21/384 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 QTPFY + T + + G D +CYA+KAN VI+ + L ++ S Sbjct: 12 QYQTPFYIFDTDVLALQIRKIRDVL-GSDVELCYAMKANP--FVIRDIEGLVESFEVCSP 68 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GEL A + E++V SGV K ++++ AL+ +ES + S + Sbjct: 69 GELSICERAGIHMEKVVMSGVYKKPEDVEYALKQYGNKIIYTAESLSHWQTLASCSKRLQ 128 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 P+ + ++FG+ I + A + + Sbjct: 129 LPVRVLLRL-------------TSGNQFGMDESLIRQIIAMGAHEFITIEGIQYFSGTQK 175 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + L + + G ++ ++ G GL I Y + + L Sbjct: 176 RSLKKLESELNMLEQFCQELNSEYGFRVKRLEYGPGLPICYFEEEKKEEEEMLNGLAVLL 235 Query: 264 FGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 I LE GR++ A G VT+V +K + + + I+D ++ A + Sbjct: 236 KHRSFEGRITLEMGRYITASCGSYVTRVADLKTNKGEPYCIVDGGIHQLTYYGQVLAMKK 295 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV--QSG 380 + + G +C D + +PGD + + GAY + Sbjct: 296 PPILPFHERKGEEKKWTVCGSLCTASDVLVKQYPFQDLQPGDPIIFQMAGAYSVTEGMA- 354 Query: 381 TYNSRLLIPEIMVN-GSQFHIIRP 403 + SR L ++ + F I RP Sbjct: 355 LFLSRELPQVLLYSAKEHFRIARP 378 >gi|330952170|gb|EGH52430.1| diaminopimelate decarboxylase [Pseudomonas syringae Cit 7] Length = 90 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 1/85 (1%) Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 D DIVGPICETGDF+A R++A GDLL + GAYG V S YN+R E+ Sbjct: 4 DSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRAAEV 62 Query: 392 MVNGSQFHIIRPRMTFQELIELDSI 416 +V+GSQ +R R T EL +S+ Sbjct: 63 LVDGSQAFEVRRRETVAELFAGESL 87 >gi|126654279|ref|ZP_01726062.1| hypothetical protein BB14905_10510 [Bacillus sp. B14905] gi|126589268|gb|EAZ83428.1| hypothetical protein BB14905_10510 [Bacillus sp. B14905] Length = 379 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 119/386 (30%), Gaps = 20/386 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P Y + KN + D + ALK S + + +G+ S Sbjct: 8 KVPSPSYVVDERLLTKNLELLKSIQDRTGCRILLALKGFSMHSTFPLVGEYLAGITASSL 67 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R + E V++ + +L S ++ + S GK Sbjct: 68 HEARLGYE-KMGKEVHVYAPAYIEHEMDELLGYVDH--VVFNSFNQWAQFKDKVKSTGKT 124 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 R+NP+ + + G + + Sbjct: 125 IECGIRLNPEYSEIETALYDPCYTNSRLGTTLANFDKSQLDGID-----------GLHFH 173 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 ++ +++ + ++ H ++ ++ GGG +H ++I+ Sbjct: 174 AMCEQNSDTLERIIEVVEEKFGDVLHQMKWLNFGGG----HHITREDYDVEKLVNIINYV 229 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + LEPG + + G LV V+ I+ ILD + M L Y + Sbjct: 230 QEKYNLLVYLEPGEAVALNTGYLVATVLDIQ-ENGMDLAILDTSATCHMPDVLEMPYRPM 288 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 A + H + G C GD I +PGD L Y V++ +N Sbjct: 289 IIGSGQANEFAH-TYRLGGLTCLAGDVIGDYSFEQPLKPGDRLVFTDMAHYSMVKNHMFN 347 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 L + N + I F++ Sbjct: 348 GVNLPSIVSYNDEEGIKIIREFKFED 373 >gi|330962453|gb|EGH62713.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 387 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 93/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I K Y FD V YA+KAN VI L GS DI Sbjct: 21 ADKQETPFVVIDTAIISKAYDDLRAGFDF--AKVYYAVKANPAVEVINLLKDKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + L+ V ER+ + K +I + G+ F +S E N + G Sbjct: 79 SIYELDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 SKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+++ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD +Y TGAY Sbjct: 309 MDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|303314889|ref|XP_003067453.1| ornithine decarboxylase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240107121|gb|EER25308.1| ornithine decarboxylase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 490 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 76/388 (19%), Positives = 136/388 (35%), Gaps = 39/388 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I + + D YA+K N N ++ LA G G D S+ E++R Sbjct: 40 FFVADEPFIHNQLKLWESKLS--DVEPFYAVKCNDNLRFLRILAEHGLGFDCASQSEMQR 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ K+ D I A Q G+ ++E EL+ L + + Sbjct: 98 ILNLGVEPHRILYAAPFKSEDGILYAKQHGVTQTMFDTEDELRKLADYFPNAELYLRLW- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S + K+G+ + Q L A L +K+ G+ H+GS + Sbjct: 157 ---------ADDPSSRVRLGSKYGVQLPQAKELLVLAQEL-NMKVIGLCFHVGSSAADFD 206 Query: 209 SFHKA----FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 ++ +A ++ H I+ ID+GGG + + Sbjct: 207 AYRQAIAFTREVYDFNQSLREDQRHPIRTIDIGGGFSLGNFESAATVIRKSIRQ---YFG 263 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF------------VILDVAMNDFM 312 + + EPGR+ + LV +V+ + A + ++ + Sbjct: 264 DEKHLRWVAEPGRYFAEEAFYLVCRVLGTRPRACLGNGIGADEKLPVGDIHINDGIYHNF 323 Query: 313 RPTLYDAYHEINYIVNPAGDR------LHIHADIVGPICETGDFIALNRKIA-LPRPGDL 365 L + ++N G + G C++ D IA N + + GD Sbjct: 324 LNALTEQVVPQPILLNCTGTPYVSAADNGDPYTVWGQTCDSFDKIATNCVLPRRAKVGDW 383 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 L GAY V +N + +I+ Sbjct: 384 LCFPFMGAYTHVTGSDFNGFPRLKKIIW 411 >gi|15599715|ref|NP_253209.1| ornithine decarboxylase [Pseudomonas aeruginosa PAO1] gi|107099896|ref|ZP_01363814.1| hypothetical protein PaerPA_01000917 [Pseudomonas aeruginosa PACS2] gi|116052549|ref|YP_792864.1| ornithine decarboxylase [Pseudomonas aeruginosa UCBPP-PA14] gi|218893611|ref|YP_002442480.1| ornithine decarboxylase [Pseudomonas aeruginosa LESB58] gi|254238823|ref|ZP_04932146.1| hypothetical protein PACG_04987 [Pseudomonas aeruginosa C3719] gi|254244669|ref|ZP_04937991.1| hypothetical protein PA2G_05538 [Pseudomonas aeruginosa 2192] gi|296391234|ref|ZP_06880709.1| ornithine decarboxylase [Pseudomonas aeruginosa PAb1] gi|313107163|ref|ZP_07793363.1| ornithine decarboxylase [Pseudomonas aeruginosa 39016] gi|9950761|gb|AAG07907.1|AE004866_1 ornithine decarboxylase [Pseudomonas aeruginosa PAO1] gi|115587770|gb|ABJ13785.1| putative ornithine decarboxylase [Pseudomonas aeruginosa UCBPP-PA14] gi|126170754|gb|EAZ56265.1| hypothetical protein PACG_04987 [Pseudomonas aeruginosa C3719] gi|126198047|gb|EAZ62110.1| hypothetical protein PA2G_05538 [Pseudomonas aeruginosa 2192] gi|218773839|emb|CAW29653.1| ornithine decarboxylase [Pseudomonas aeruginosa LESB58] gi|310879865|gb|EFQ38459.1| ornithine decarboxylase [Pseudomonas aeruginosa 39016] Length = 387 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 88/373 (23%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF I Y ++ F + YA+KAN + + L GS DI Sbjct: 21 ADKQETPFVVIDKQTIADAYDQLTDCFPF--ARIYYAVKANPATEITELLRDKGSNFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + + V ERI + K +I + G+ F +S E N + G Sbjct: 79 SIYELDKVMKTGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L ++ G+ H+G Sbjct: 137 AKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARQLG-LEPYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIVLKMINMGGGFPANYITKTNDLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + A + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYADVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + + K + L GD LY TGAY Sbjct: 309 MDESIKFPIWTEKQGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLASGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|1702874|emb|CAA64451.1| ornithine decarboxylase [Candida albicans] Length = 470 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 81/390 (20%), Positives = 139/390 (35%), Gaps = 46/390 (11%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE--L 86 F+ I + + + YA+K NSN ++ TL+ LG D S+ E L Sbjct: 77 FFVCDLGEIINSVNQWQQSLPM--VQPYYAVKCNSNPQILTTLSELGVNFDCASKNEIDL 134 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 +L ERI+++ KT I A + V++ EL L + + Sbjct: 135 VLSLGIHQAHERIIYANPCKTNSFIRHAANENVNLTTVDNVHELYKLAKFHPHCKILIRL 194 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 T + + KFG ++ + +++ GV H+GS Sbjct: 195 I----------TDDSTAQCQLSTKFGCDLNTAIGEILPKAKELSLQVHGVAFHVGSGAKD 244 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQYFG 265 S ++A K R L ++ S G + +D+GGG ++ Sbjct: 245 FSSIYQAIKDSRILFDEMLSMGFTPKLLDIGGGFERETFPQSSQMVKFALEKFFPIEFSQ 304 Query: 266 NLQCKIILEPGRFLVADVGILVTKVI-------------------SIKKSADKTFVILDV 306 + + K I EPGRF+VA+ L+T +I ++ D + L+ Sbjct: 305 SNEIKFIAEPGRFMVANAFTLITHIIARRDLPTGGNNHNNDMTPSAMLYINDGVYGNLNC 364 Query: 307 AMNDFMRPTLY-----------DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + D P +Y + N I GP C+ D ++ Sbjct: 365 ILFDHQTPKVYVLTNENQLFYKQEMMRSLSVNNNNNKTDGFKFSIWGPTCDGLDCVSSLA 424 Query: 356 KIAL-PRPGDLLYIEKTGAYGAVQSGTYNS 384 K++ + GD L+ E GAY + S +N Sbjct: 425 KLSKNVQVGDWLFFENVGAYTSCASTKFNG 454 >gi|213966727|ref|ZP_03394878.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Pseudomonas syringae pv. tomato T1] gi|301383239|ref|ZP_07231657.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. tomato Max13] gi|302061449|ref|ZP_07252990.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. tomato K40] gi|302133486|ref|ZP_07259476.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928577|gb|EEB62121.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Pseudomonas syringae pv. tomato T1] gi|331018464|gb|EGH98520.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 387 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 93/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I K Y FD V YA+KAN VI L GS DI Sbjct: 21 ADKQETPFVVIDTAIISKAYDDLRAGFDF--AKVYYAVKANPAVEVINLLKDKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + L+ V ER+ + K +I + G+ F +S E N + G Sbjct: 79 SIYELDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 AKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+++ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD +Y TGAY Sbjct: 309 MDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|169828941|ref|YP_001699099.1| hypothetical protein Bsph_3481 [Lysinibacillus sphaericus C3-41] gi|168993429|gb|ACA40969.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 379 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 65/386 (16%), Positives = 119/386 (30%), Gaps = 20/386 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P Y + KN + D + ALK S + + +G+ S Sbjct: 8 KVPSPSYVVDERLLTKNLELLKSIQDRTGCRILLALKGFSMHSTFPLVGEYLAGITASSL 67 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R + E V++ + +L S ++ + S GK Sbjct: 68 HEARLGYE-KMGKEVHVYAPAYIEHEMDELLGYVDH--IVFNSFNQWAQFKDKVKSAGKT 124 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 RVNP+ + + G + + Sbjct: 125 IECGIRVNPEYSEIETALYDPCYTNSRLGTTLANFDKSQLDGID-----------GLHFH 173 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 ++ +++ + ++ H ++ ++ GGG +H ++I+ Sbjct: 174 AMCEQNSDTLERIIEVVEEKFGDVLHQMKWLNFGGG----HHITREDYDVEKLVNIINYI 229 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + LEPG + + G LV V+ I+ ILD + M L Y + Sbjct: 230 QEKYNLLVYLEPGEAVALNTGYLVATVLDIQ-KNGMDLAILDTSATCHMPDVLEMPYRPM 288 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 A + H + G C GD I +PGD L Y V++ +N Sbjct: 289 IIGSGQANEFAH-TYRLGGLTCLAGDVIGDYSFEQPLKPGDRLVFTDMAHYSMVKNHMFN 347 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 L + N + I F++ Sbjct: 348 GVNLPSIVSYNDEEGIKIIREFKFED 373 >gi|326202215|ref|ZP_08192085.1| Orn/DAP/Arg decarboxylase 2 [Clostridium papyrosolvens DSM 2782] gi|325988010|gb|EGD48836.1| Orn/DAP/Arg decarboxylase 2 [Clostridium papyrosolvens DSM 2782] Length = 388 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 87/383 (22%), Positives = 141/383 (36%), Gaps = 20/383 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 QTPFY + T + A G D +CYA+KAN VIK + + ++ S Sbjct: 12 QYQTPFYIFDTDILANQINKIRTAL-GTDVEICYAMKANP--FVIKEMQDIVDYFEVCSH 68 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GE A + +IV SGV K +I+ + ES + N +L + Sbjct: 69 GEFNICELADIDVNKIVMSGVYKNFTDIETMIYEYGNQIIYTIESLSQWKNIADFALEHQ 128 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + + ++FG+ I + A + P + I G+ G+Q Sbjct: 129 RHVRVLLRLTTG-------------NQFGMDETVIREIIANRNKNPYIDIEGIQFFSGTQ 175 Query: 204 IDQIESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F K ++L +L + NI+ I+ G GL I Y D+ L Q Sbjct: 176 KKSTSKFEKELEMLDNLCSDLQKQYAFNIKKIEYGPGLPICYFEDNNNVEDLMLDLLAKQ 235 Query: 263 YFGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 I LE GRF+ A G VT V+ +K + ++ F I+D ++ Sbjct: 236 IKKLNFKGKITLEIGRFIAASCGFYVTSVVDVKVNNNENFCIVDGGIHHLNYLGQIMGMK 295 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS-G 380 + I + G +C D + GD L +K GAY + Sbjct: 296 KPPIIHWNEKSGEAKEWTVCGSLCTVNDVLVKQYPFVDISRGDTLIFKKVGAYSVTEGIS 355 Query: 381 TYNSRLLIPEIMVNGS-QFHIIR 402 + S L ++ + +F + R Sbjct: 356 LFLSHELPQVLLYSEKCKFRLAR 378 >gi|83593028|ref|YP_426780.1| ornithine decarboxylase [Rhodospirillum rubrum ATCC 11170] gi|83575942|gb|ABC22493.1| ornithine decarboxylase [Rhodospirillum rubrum ATCC 11170] Length = 421 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 84/375 (22%), Positives = 145/375 (38%), Gaps = 21/375 (5%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA +TP +E NY A V YA+K+N ++ L LGS D Sbjct: 54 LAEEPETPCLVVDLDVVEGNYRALRGALPQ--AEVYYAVKSNPAPPLVARLIALGSSFDT 111 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S E+ L ++ F K +I A + G+ F ++E EL+ L + A Sbjct: 112 ASLPEIDLCLGLGADPAKLSFGNTIKKSKDIAAAYERGVRLFAFDAEEELEKLAEHAPGS 171 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + KFG + L A L ++ GV H+ Sbjct: 172 QVFCRLFVDNVGA----------EWPLSRKFGCSVAMAGDLLIKAQALG-LEAHGVSFHV 220 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL- 259 GSQ + + A + +L + L + G ++ +++GGGL +Y + A + Sbjct: 221 GSQQKDLGQWDVALEKAAELFRDLAAVGITLKMVNLGGGLPTSYGNRLPYGVDEYGAHVL 280 Query: 260 --IHQYFGNLQCKIILEPGRFLVADVGILVTKVI-SIKKSADKTFVILDVAMNDFMRPTL 316 + + F + ++I+EPGR++ + G+L T+V+ +K A + + F Sbjct: 281 GAVDRLFDGPRPRLIVEPGRYMGGNAGVLETEVVLVSRKDAADDRRWVYIDAGRFNGLAE 340 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGA 373 + I++ D I GP C++ D + + L + GD L + TGA Sbjct: 341 TEGEAIRYPIISDKDDGETGPVIIAGPTCDSVDILYDKAGYTLPLSLKAGDRLRLLSTGA 400 Query: 374 YGAVQSGT-YNSRLL 387 Y + +N L Sbjct: 401 YTTSYASVGFNGFLP 415 >gi|330991208|ref|ZP_08315160.1| Lysine/ornithine decarboxylase [Gluconacetobacter sp. SXCC-1] gi|329761701|gb|EGG78193.1| Lysine/ornithine decarboxylase [Gluconacetobacter sp. SXCC-1] Length = 379 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 87/372 (23%), Positives = 139/372 (37%), Gaps = 21/372 (5%) Query: 21 LAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA TP +E+ Y A + YA+KAN A+++ L LGS D Sbjct: 12 LAEQAPATPCLVVDVDRVEERYRALREALPL--ARIYYAVKANPANAILRRLVGLGSAFD 69 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S E+ L A I F K I A Q+G+ F + EL L + A Sbjct: 70 AASWEEISMCLEAGARPADISFGNTVKKAGNIARAYQAGVDMFAFDCAEELDKLARHAPG 129 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + KFG + L A L + G+ H Sbjct: 130 SRVYCRLIVENEGA----------DWPLSRKFGTTLDNARDLMLRARDLG-LDPYGLSFH 178 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA-- 257 +GSQ + ++ A + L L++ G +++ +++GGG I Y D A Sbjct: 179 VGSQQTETGAYEAAIARVGMLFTDLKAAGLDLRMVNLGGGFPIRYRDDVPGIDRFAVAIS 238 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + ++FGN ++I+EPGRF+V D G++ ++V+ + + V Sbjct: 239 HAMTEHFGNDLPEMIIEPGRFMVGDAGVVSSEVVLVSRRGMNDGVRWVYLDIGRFGGLAE 298 Query: 318 DAYHEINYIVNPAGDRLHI-HADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGA 373 I Y + D + I GP C+ D + + L GD + + TGA Sbjct: 299 TEGEAIRYGIRTPHDGMETGPVAIAGPTCDGADIMYEKTPYALPLALESGDRIELLSTGA 358 Query: 374 YGAVQ-SGTYNS 384 Y + S +N Sbjct: 359 YVSTYCSTGFNG 370 >gi|328947178|ref|YP_004364515.1| ornithine decarboxylase [Treponema succinifaciens DSM 2489] gi|328447502|gb|AEB13218.1| Ornithine decarboxylase [Treponema succinifaciens DSM 2489] Length = 389 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 93/375 (24%), Positives = 154/375 (41%), Gaps = 22/375 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP + ++KN+LT ++F + YA+KAN + V++ L+ LGS DI S Sbjct: 21 KDLETPNIVINLNKVKKNFLTLKDSFPY--ARIFYAIKANPGEPVLELLSDLGSNFDIAS 78 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 EL V +R+ + K +I G+ F +S +LK + + A Sbjct: 79 RYELDLISKFNVSPDRLSYGNTIKKAKDIKYFYDKGVRMFATDSRDDLKNIAEFAPGSKI 138 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + KFG + L A L V G+ H+GS Sbjct: 139 YVRILVENSATAD---------WPLSRKFGCHPDMAYDLIVMARDLGLV-PYGISFHVGS 188 Query: 203 QIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASL 259 Q I ++ A + L + I++GGG +Y S + + Sbjct: 189 QQRDIGQWNDAIAKAKYLFNSLEEEESIKLSMINMGGGFPASYIDPTNDLSVYASEISRY 248 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK---TFVILDVAMNDFMRPTL 316 +H FG+ +IILEPGR LV D GIL ++VI + + +V LD + + TL Sbjct: 249 LHDDFGDEIPQIILEPGRSLVGDSGILTSEVILTSRKNNTALARWVYLDSGKFNGLIETL 308 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKTGA 373 ++ A ++ I GP C++ D + N K+ + + GD +Y TGA Sbjct: 309 DESIKYPVITSQDAPEKKEGEVIIAGPTCDSMDIMYENAKYKLPVSLKAGDKVYWLSTGA 368 Query: 374 YGAVQSGT-YNSRLL 387 Y + + +N Sbjct: 369 YTSTYASVAFNGFPP 383 >gi|152985411|ref|YP_001348455.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PA7] gi|150960569|gb|ABR82594.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PA7] Length = 394 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 89/366 (24%), Positives = 148/366 (40%), Gaps = 9/366 (2%) Query: 16 VSLEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 ++L L + P Y Y A+ + A + YA KAN A+++TLA Sbjct: 9 LALADLRRQREEPLCAYLYDLPALAERVRAMRAALPPA-CELFYAAKANPEAAILRTLAP 67 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 L G + S GEL P ++F G GK E+D AL + + F+VES EL+ L Sbjct: 68 LVDGFEAASGGELAWLRQ-HCPEHPLIFGGPGKLESELDAALLANLDAFHVESLHELRRL 126 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 A ++ P+ R+N ++ ++ G K FG+ + A P +++ Sbjct: 127 ASLARRRERRIPLLLRLNLKLDETPDSRLVMGGKPTPFGLDEEALDEALALLREEPALEL 186 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 G+ H+ S + + + + + +G + ++VGGG+GI Y R Sbjct: 187 KGLHFHLLSHQLDVSAHLQLVRAYCRAFLRIAGESGLPLSLLNVGGGMGIDYRDFARSFD 246 Query: 253 SSDYASLIHQYFGNLQCKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 S + + I E GR++ A G V +V+ IK++ + F + + Sbjct: 247 WSGFCDALPALLDEEGMGGIRLRFEVGRYIAAPCGYYVMEVLDIKRNHGELFAVARGGTH 306 Query: 310 DFMRPTLYDAYHEINY-IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 F P H A + +VG +C D +A + +A GDLL Sbjct: 307 HFRTPAAQGHDHPFVVVRGERAAEIEDQAVTLVGQLCTPKDVLARRQPVAALAVGDLLVF 366 Query: 369 EKTGAY 374 GAY Sbjct: 367 TLAGAY 372 >gi|254785712|ref|YP_003073141.1| carboxynorspermidine decarboxylase [Teredinibacter turnerae T7901] gi|237686123|gb|ACR13387.1| carboxynorspermidine decarboxylase [Teredinibacter turnerae T7901] Length = 395 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 68/390 (17%), Positives = 129/390 (33%), Gaps = 22/390 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 VQTP Y +E N + V ALKA S ++ + G+ Sbjct: 21 TVQTPCYVVDECRVEHNLKILHHVQKASGAKVLLALKAFSMYSLAPLVMRYLHGVCASGI 80 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R E + + + D+ S FN SE + + Sbjct: 81 NEARLGRE-EYQGEVHTYCAAFRPHEFDDIVALSNHVIFNSVSEWQRYQARALEHLDARD 139 Query: 144 A-PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 R+NP + + GIP+ ++L GV ++G+ Sbjct: 140 NLAFGLRINPQHSEGETPMYDPCAPCSRMGIPL----------ASLDGVDLTGISGLHFH 189 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + + F + L + ++ ++ I+ GGG +H + + Sbjct: 190 TLCE-QDFAPLARTLDAVEEKFGHLLTKMRWINFGGG----HHITREGYNVEGLIERVKL 244 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ +EPG + + G+L+T+V+ + + + P + + + Sbjct: 245 FSKTYGVQVYIEPGEAIALNAGVLITEVLDTLH--NTMDLAITDTSATCHMPDVLEMPYR 302 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + GP C GD I +PG L E Y V++ T+ Sbjct: 303 PRITGAGEPGEKPHTYRLGGPSCLAGDVIGDYSFDEPLQPGSRLQFEDMAIYTMVKNTTF 362 Query: 383 NSRLLIPEIMVNGSQFHIIR--PRMTFQEL 410 N L +IMV S+ +R +++ Sbjct: 363 NGINLP-DIMVWNSETQSLRLVKSFGYEDF 391 >gi|54025755|ref|YP_119997.1| putative ornithine decarboxylase [Nocardia farcinica IFM 10152] gi|54017263|dbj|BAD58633.1| putative ornithine decarboxylase [Nocardia farcinica IFM 10152] Length = 371 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 76/379 (20%), Positives = 141/379 (37%), Gaps = 21/379 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMD---TMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 +P+ + NY + A G T + YA+KA+ +I+ L G+ D+ S Sbjct: 4 SPYLVIHPERVRDNYRALAAAVSGRGLRGTRIRYAVKASPVPELIRLLDTEGAEFDVASI 63 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GE+ A V ++ + K +I A G+ F ++E +L + + A + Sbjct: 64 GEIDLCRAQGVAPHKLCYGNTVKKAADIARAHAVGVRRFAFDTEDDLLRIAEHAPGAQVE 123 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 S KFG + L A L ++++G H+GSQ Sbjct: 124 CRFL----------ASAPQSRTPFGTKFGCAPQEAARLLVRARDLG-LEVAGPYFHVGSQ 172 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 +++ + + L + +++GGGL IAY Sbjct: 173 QLDPDAWRIGIEQAGHIANALSDKEIPVTSVNIGGGLPIAYADAAPALDRIAAVIEEAAA 232 Query: 264 FG-NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 +++EPGR LV + G + +V++++ + D + + Y Sbjct: 233 RHLPPTATLVVEPGRALVGNAGTIHAEVVAVRIAPDGRRWVYLDIGRYNGMAETENEYIA 292 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIAL--NRKIA-LPRPGDLLYIEKTGAYGAVQS 379 ++ GD + + GP C+ D + + R GD + I TGAY A S Sbjct: 293 YRFVTERDGDPVDEAV-VAGPTCDGDDVLYQRTRVLLPTTLRAGDRVQILDTGAYTASYS 351 Query: 380 G-TYNSRLLIPEIMVNGSQ 397 ++N + V+G++ Sbjct: 352 SVSFNGFP-PLTVHVSGAE 369 >gi|9631775|ref|NP_048554.1| hypothetical protein PBCV1_A207R [Paramecium bursaria Chlorella virus 1] gi|145579908|pdb|2NVA|A Chain A, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579909|pdb|2NVA|B Chain B, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579910|pdb|2NVA|C Chain C, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579911|pdb|2NVA|D Chain D, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579912|pdb|2NVA|E Chain E, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579913|pdb|2NVA|F Chain F, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579914|pdb|2NVA|G Chain G, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|145579915|pdb|2NVA|H Chain H, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Bound To Agmatine gi|1181370|gb|AAC96575.1| PBCV-1 arginine decarboxylase [Paramecium bursaria Chlorella virus 1] Length = 372 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 81/359 (22%), Positives = 144/359 (40%), Gaps = 15/359 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY S +E ++ F YA+K N+++ ++KT+ D S E+++ Sbjct: 19 FYVSSPKIVEDLIDQWTILFPR--VTPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKK 76 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V RI+F+ KTID++ A G+ +S EL ++ + I Sbjct: 77 VIQIGVSPSRIIFAHTMKTIDDLIFAKDQGVDIATFDSSFELDKIHTYHPNCKMILRIRC 136 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +T + +KFG +I L YA L ++ G+ H+GS E Sbjct: 137 D----------DPNATVQLGNKFGANEDEIRHLLEYAKQLDI-EVIGISFHVGSGSRNPE 185 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL-IHQYFGNL 267 ++++A K ++ + S GH +D+GGGL SDY + I +F Sbjct: 186 AYYRAIKSSKEAFNEAISVGHKPYILDIGGGLHADIDEGELSTYMSDYINDAIKDFFPED 245 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 I+ EPGRF +L T+VI + + + +++ ++ Sbjct: 246 TVTIVAEPGRFFAEHYSVLATQVIGKRVRDGLYEYFFNESTYGGFSNVIFEKSVPTPQLL 305 Query: 328 NP-AGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D ++ + + G C+ D I N + GD +Y GAY V + ++N Sbjct: 306 RDVPDDEEYVPSVLYGCTCDGVDVINHNVALPELHIGDWVYFPSWGAYTNVLTTSFNGF 364 >gi|126330250|ref|XP_001366754.1| PREDICTED: hypothetical protein isoform 1 [Monodelphis domestica] Length = 456 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 72/387 (18%), Positives = 132/387 (34%), Gaps = 37/387 (9%) Query: 14 ENVSLEKLAHVV--------QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 E + L + T F+ + K +L F Y +K NS+ Sbjct: 15 EGFTTRDLLEELTLGGPQDEGTSFFVADLGDVVKKHLRFLKNLPR--VRPFYVVKCNSSP 72 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 V++ LA LG G ++ E+ VPA +I+++ K ++ A + GI + + Sbjct: 73 GVLRALAELGLGFSCANKAEMELLRHIGVPAHKIIYTSPCKQAAQVKQAARLGIRMLSFD 132 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 +E EL + + + IA T S + K G + L A Sbjct: 133 NEVELAKVARSHPTARMVLRIA----------TDDSCSPARLSMKLGATLKSCRHLLETA 182 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + + ++F ++ R + + G+ + +D+GGG Sbjct: 183 KKMNMEVVGVSFHVGSGCSSDPQAFTQSIADARLVFEMGTELGYRMHILDLGGGFPGTED 242 Query: 246 SDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT--- 300 S R + + + I+ EPGR+ VA L ++++ K+ Sbjct: 243 SKVRFEEMASVINSALDMYFPEGCGVDILAEPGRYYVASAFTLAVRIVAKKEVPSDQTGL 302 Query: 301 ------------FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 + I + F +A P+ D+ + + GP C+ Sbjct: 303 DEEDGASPKSIVYHISEGVYGAFNCVFFDNACPMPILQKKPSPDQRVYSSSLWGPTCDDL 362 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYG 375 D +A + + GD L E GAY Sbjct: 363 DHVAEGLCLPELQLGDWLIFENMGAYT 389 >gi|257482121|ref|ZP_05636162.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330987528|gb|EGH85631.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 387 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I K Y F+ V YA+KAN VI L GS DI Sbjct: 21 ADKQETPFVVIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + ++ V ERI + K +I + G+ F +S E N + G Sbjct: 79 SIYELDKVMSCGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 AKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+++ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD +Y TGAY Sbjct: 309 MDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|71734289|ref|YP_276391.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. phaseolicola 1448A] gi|289625475|ref|ZP_06458429.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648183|ref|ZP_06479526.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. aesculi str. 2250] gi|298488376|ref|ZP_07006407.1| Ornithine decarboxylase / Arginine decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554842|gb|AAZ34053.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157001|gb|EFH98090.1| Ornithine decarboxylase / Arginine decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322601|gb|EFW78694.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. glycinea str. B076] gi|320330144|gb|EFW86130.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. glycinea str. race 4] gi|330869021|gb|EGH03730.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330882340|gb|EGH16489.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. glycinea str. race 4] gi|330888738|gb|EGH21399.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. mori str. 301020] Length = 387 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I K Y F+ V YA+KAN VI L GS DI Sbjct: 21 ADKQETPFVVIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + ++ V ERI + K +I + G+ F +S E N + G Sbjct: 79 SIYELDKVMSCGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 AKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+++ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD +Y TGAY Sbjct: 309 MDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|70734359|ref|YP_257999.1| pyridoxal-dependent decarboxylase domain-containing protein [Pseudomonas fluorescens Pf-5] gi|68348658|gb|AAY96264.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain [Pseudomonas fluorescens Pf-5] Length = 387 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 91/373 (24%), Positives = 139/373 (37%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I + Y F+ V YA+KAN +I L GS DI Sbjct: 21 ADQQETPFVVIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLHEKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + L V I + K +I G+ + +S E N + G Sbjct: 79 SIYELDKVLGRGVNPANISYGNTIKKSKDIRYFYDKGVRLYATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V GV H+G Sbjct: 137 SKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGVSFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD LY TGAY Sbjct: 309 MDESIKFPIWTEKKGEVEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|78355620|ref|YP_387069.1| carboxynorspermidine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218025|gb|ABB37374.1| carboxynorspermidine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 391 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 69/388 (17%), Positives = 117/388 (30%), Gaps = 15/388 (3%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P + + +N + ALK + +V L + G S Sbjct: 13 RVPSPCFVVDEGLLSRNLAVLDTVQQRTGARILLALKGFAMFSVFPLLRTVLHGACASSP 72 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A E VF+ D D+ + FN ++ E +A Sbjct: 73 HEARLAREEFGR-EVHVFAAAYSDDDMQDILRHADHVVFNSFAQLERFRPAVQACPRHVS 131 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 I A G + + A + GV+ Sbjct: 132 MGIRVNPEHSEGA------VPIYDPCSDGSRLGVRLREFEAALERDSGALDGVEGLHFHT 185 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + Q + + L ++ ++ H +Q +++GGG I Sbjct: 186 LCQHNADA-LERTLAEVEKKFGRWMHGMQWVNMGGGHHITRSD----YDVDTLCRCAAHV 240 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG + D GILV V+ + ++ D ILD + M L Y Sbjct: 241 RRTYGVQVYLEPGEAVALDTGILVATVLDVVQA-DMPVAILDASAACHMPDVLEMPYRPH 299 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 G++ G C GD I R GD + Y V++ T+N Sbjct: 300 VIGSGLQGEKA-YSYRFAGKSCLAGDVIGEYSFDEPLRAGDRVAFTDMAIYSMVKTNTFN 358 Query: 384 SRLLIPEIMVNGSQFHIIRPR-MTFQEL 410 L + I+ R +++ Sbjct: 359 GLQLPAIARYRPATDEILVERTFGYEDF 386 >gi|328469042|gb|EGF39997.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus MTCC 5462] Length = 159 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 52/139 (37%) Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI 336 R +V G + V S K + + + + Sbjct: 1 RSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNIRPALYQAQYTAVVADHPTAKPTE 60 Query: 337 HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS 396 H +VG CE+GD + + + +PGD++ + TGAYG + YN + V Sbjct: 61 HVHLVGKYCESGDILIDDAPLPATQPGDVVAVFDTGAYGYSMASNYNRNPRPAIVFVEDG 120 Query: 397 QFHIIRPRMTFQELIELDS 415 Q ++ R ++ +LI+ D Sbjct: 121 QAQLVVTRESYADLIQHDQ 139 >gi|260951019|ref|XP_002619806.1| hypothetical protein CLUG_00965 [Clavispora lusitaniae ATCC 42720] gi|238847378|gb|EEQ36842.1| hypothetical protein CLUG_00965 [Clavispora lusitaniae ATCC 42720] Length = 447 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 74/380 (19%), Positives = 140/380 (36%), Gaps = 29/380 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + +++ + YA+K N++ V+ L +G+ D S+ E+ Sbjct: 67 FFVADLGQVFRSFQLWKETLPR--VQPFYAVKCNTDPHVVSLLGRMGANFDCASKTEIDT 124 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L +RI+++ KT I A + + V++ +EL L + I Sbjct: 125 VLGLGFTPDRIIYANPCKTNSFIRHACEKNVNLTTVDNANELYKLKRFHPRTRILIRIV- 183 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + + KFG + + + ++GV H+GS + Sbjct: 184 ---------TDDESAQCRLSTKFGCTVEVAVNQLLPLCRELDLDVAGVAFHVGSGATCFD 234 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQYFGNL 267 SF A K R + G + +D+GGG + Y Sbjct: 235 SFFHAIKDARRIFDAGEQLGLRLTILDIGGGFEPCSFDAATQVVNRALDTFFPTTYAQQH 294 Query: 268 QCKIILEPGRFLVADVGILVTKVISIK----KSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + I EPGRF+VA+ L T +I+ + S + + ++ + + L+D H Sbjct: 295 GMQFIAEPGRFMVANAFTLATHIIARRDLDSNSGMEAMLYINDGVYGNLNCVLFDHQHPE 354 Query: 324 NYIVNPAGD-----------RLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKT 371 ++ AG H + I GP C+ D ++ + GD LY + Sbjct: 355 AKVLKHAGKMFPGEMDGETQSQHYNFSIWGPTCDGLDCVSSKTALPANVGVGDWLYFPEL 414 Query: 372 GAYGAVQSGTYNSRLLIPEI 391 GAY + + ++N ++ Sbjct: 415 GAYTSAATTSFNGFSGCAKV 434 >gi|145579900|pdb|2NV9|A Chain A, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579901|pdb|2NV9|B Chain B, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579902|pdb|2NV9|C Chain C, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579903|pdb|2NV9|D Chain D, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579904|pdb|2NV9|E Chain E, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579905|pdb|2NV9|F Chain F, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579906|pdb|2NV9|G Chain G, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase gi|145579907|pdb|2NV9|H Chain H, The X-Ray Crystal Structure Of The Paramecium Bursaria Chlorella Virus Arginine Decarboxylase Length = 372 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 80/359 (22%), Positives = 143/359 (39%), Gaps = 15/359 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY S +E ++ F YA+K N+++ ++KT+ D S E+++ Sbjct: 19 FYVSSPKIVEDLIDQWTILFPR--VTPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKK 76 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V RI+F+ KTID++ A G+ +S EL ++ + I Sbjct: 77 VIQIGVSPSRIIFAHTMKTIDDLIFAKDQGVDIATFDSSFELDKIHTYHPNCKMILRIRC 136 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + + +KFG +I L YA L ++ G+ H+GS E Sbjct: 137 D----------DPNAAVQLGNKFGANEDEIRHLLEYAKQLDI-EVIGISFHVGSGSRNPE 185 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL-IHQYFGNL 267 ++++A K ++ + S GH +D+GGGL SDY + I +F Sbjct: 186 AYYRAIKSSKEAFNEAISVGHKPYILDIGGGLHADIDEGELSTYMSDYINDAIKDFFPED 245 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 I+ EPGRF +L T+VI + + + +++ ++ Sbjct: 246 TVTIVAEPGRFFAEHYSVLATQVIGKRVRDGLYEYFFNESTYGGFSNVIFEKSVPTPQLL 305 Query: 328 NP-AGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D ++ + + G C+ D I N + GD +Y GAY V + ++N Sbjct: 306 RDVPDDEEYVPSVLYGCTCDGVDVINHNVALPELHIGDWVYFPSWGAYTNVLTTSFNGF 364 >gi|156550612|ref|XP_001604342.1| PREDICTED: similar to ENSANGP00000020224 [Nasonia vitripennis] Length = 405 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 69/392 (17%), Positives = 125/392 (31%), Gaps = 40/392 (10%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + I + + + + YA+K N + VIK LA LG D S+ E+ Sbjct: 34 PIHMLDVGDIIRKHQLWMEKMPR--VVPYYAVKCNPDSTVIKVLAALGGHFDCASKQEII 91 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + ++ V A+RI+++ K I+ A + G+ + E ELK + I Sbjct: 92 QTMSQGVSADRIIYANPMKFSSHIEYARKVGVAMMTADCEDELKKIKDVYPDAKIVIRIR 151 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 +KFG A+ G+ + G H+GS + Sbjct: 152 CDTEVTT----------ACLGEKFGCDPSSDAVQLIKATLDLGLTLHGFSFHVGSPCGEP 201 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + + ++L ++ G + GG + Sbjct: 202 MAICRGILWCKNLIDTAKAMGCRDVSLIDIGGGIPEL-------------INDALENIDS 248 Query: 268 QCKIILEPGRFLVADVGILVTKVISIK--KSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 +II EPGR+ V V K ++ + V+ + + + + Sbjct: 249 SIEIISEPGRYYVTSAFTSAAYVFGKKTLMKENQKTFMYYVSDGVYGSFIEELLHIKARH 308 Query: 326 IVNPAG-----DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 V + + + GP C++ D + N + GD L G+Y S Sbjct: 309 PVRLTNSTSITNDEKYLSTVWGPTCDSYDVLLKNHMLPEFNVGDWLAWSDIGSYSTCLST 368 Query: 381 TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 +N + H I R + L Sbjct: 369 EFNGFQAP--------KIHPIIRRKDWNYLWA 392 >gi|148252905|ref|YP_001237490.1| ornithine decarboxylase [Bradyrhizobium sp. BTAi1] gi|146405078|gb|ABQ33584.1| ornithine decarboxylase [Bradyrhizobium sp. BTAi1] Length = 380 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 88/367 (23%), Positives = 149/367 (40%), Gaps = 20/367 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + NY+ F+ A D+ V YA+KAN V+ LA LGS D + E+ Sbjct: 21 PCLVVDLDVVRDNYMNFAKALP--DSRVFYAVKANPAPEVLSLLASLGSSFDTATVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ALAA +RI + K +I A GI F V+ +E++ +++ A I Sbjct: 79 MALAAGATPDRISYGNTIKKERDIARAYALGIRLFAVDCAAEVEKISRAAPGAKVFCRIL 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + A L ++ G+ H+GSQ ++ Sbjct: 139 YDCAGA----------EWPLSRKFGCDPEMAVEVLDLAKRLG-LEPCGISFHVGSQQRKV 187 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 +++ +A + + + G N+ +++GGG Y D P + ++FG Sbjct: 188 KAWDRALAMASTVFRDCAERGINLSMVNMGGGFPTKYLKDVPPVVQYGRSIFRALRKHFG 247 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + GI+ ++V+ I + +D+ + I Y Sbjct: 248 NQIPETIIEPGRGMVGNAGIIESEVVLISRKSDEDELRWVYLDIGKFGGLAETMDESIRY 307 Query: 326 IVNPAGDRLHI-HADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 + D + + GP C++ D + LP GD + IE TGAY + S Sbjct: 308 AIRTPHDGADMTPCVLAGPTCDSADVMYEKLPYPLPVTLSIGDKVLIEGTGAYTSTYSSV 367 Query: 382 -YNSRLL 387 +N Sbjct: 368 AFNGIPP 374 >gi|317486184|ref|ZP_07945022.1| carboxynorspermidine decarboxylase [Bilophila wadsworthia 3_1_6] gi|316922561|gb|EFV43809.1| carboxynorspermidine decarboxylase [Bilophila wadsworthia 3_1_6] Length = 406 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 54/397 (13%), Positives = 115/397 (28%), Gaps = 16/397 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL---D 79 +P + + N + ALK + V ++ G G Sbjct: 12 ERFPSPGFVVDEAKLRSNVAILDEVQRRTGAKILMALKCFAMWDVFPIISRSGEGALYGC 71 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT--LNQRA 137 S + R E F+ D ++L FN ++ E + + Sbjct: 72 CASSPDEARLARECFGGEVHAFAAGYSEADMVELLETVDHVLFNSFAQWERFKGMVEAKN 131 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 RVNP+ + + G+ + + + G+ Sbjct: 132 AGRATPIECGIRVNPEHSEGAVPMYDPCAPGSRLGVRLREFERFASAGGCPAQTPPPGLK 191 Query: 198 --MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + + + L+ + ++ ++ GGG I Sbjct: 192 GLSGLHFHTLCEQGADALDRTLKAFEMKFGRYLKGLKWMNFGGGHHITKEGYDIDL---- 247 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 I + ++ LEPG + + G+LV+ V+ + ++ ++ A Sbjct: 248 LCKCIERVRDRYGVQVYLEPGEAVALNAGVLVSTVLDVVRADMPVAILDTSAATHMP--D 305 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + + + I + + G C GD I + GD L Y Sbjct: 306 VLEMPYRPMVIGSGEPGEKRWSCRLAGKSCLAGDVIGEYSFDEPLKAGDRLVFTDMAIYS 365 Query: 376 AVQSGTYNSRLLIPEIMVN--GSQFHIIRPRMTFQEL 410 V++ T+N L + N + ++R +++ Sbjct: 366 MVKTTTFNGLRLPSIVRWNPETDETRLVRE-FGYEDF 401 >gi|332679018|gb|AEE88147.1| Diaminopimelate decarboxylase [Francisella cf. novicida Fx1] Length = 403 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 83/396 (20%), Positives = 146/396 (36%), Gaps = 19/396 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +LE + + PF+ Y +E + + + YALKAN +IK Sbjct: 9 NLESICKESEAPFFYYDLDMLEAHAKELH----RLPVKLWYALKANPLSRIIKVFDEQKI 64 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D+ S GEL + LA V + I+ +G K+ +++ L G+ F +ES ++ K L+ Sbjct: 65 SFDVASIGELDQVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSNL 124 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + RV + + G FG+ I+ + A IS Sbjct: 125 VEKKNINVKVLLRVQLVWDDQGGNVLGGGGCVTPFGLSINDWRDFFNSA-----PNISNN 179 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS---- 252 IG Q + KL + ++ + I+V + P + Sbjct: 180 MSIIGMHCFQWGNILCLNKLSQIWKTITKALLDLSEAINVSLKIIDLGGGIGIPYNSSQK 239 Query: 253 ----SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + + + + + LE GR+ VA+ G+ +TKV+ IK + ++ D Sbjct: 240 AVSINDLISCINNLKKEFPDIEYWLELGRYAVAESGVYITKVVDIKSVNNINLLVTDGGA 299 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 +RP L I + + + I GP+C + D + D L Sbjct: 300 QHLVRPALTGESFPIELLREESCSETNE-FQIHGPLCTSLDNAGIASLPKDIGLNDYLIF 358 Query: 369 EKTGAYGAVQSGT-YNSRLLIPEIMVNGSQFHIIRP 403 ++TGAYG +S + L EI+ +R Sbjct: 359 KQTGAYGFTESMPFFLCHNLPAEIIFYKGHLQTVRQ 394 >gi|307179325|gb|EFN67689.1| Ornithine decarboxylase 1 [Camponotus floridanus] Length = 409 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 62/361 (17%), Positives = 129/361 (35%), Gaps = 15/361 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + + + + +A+K N + VIK LA L D S+ E+ + Sbjct: 36 FYITDIGNVLRKHQEWITKMP--KVIPYFAIKCNPDPTVIKVLAALNVSFDCASKQEIEQ 93 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V +RI+F+ K I A + G+ V++E+EL + I Sbjct: 94 VMRYGVHGDRIIFAHPTKYPSHIKYAKKVGVEIMTVDNENELFKIKDLFSEAKIVIRIRC 153 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 ++ KFG ++ + + + G H+GS +++ Sbjct: 154 DAKN-------NSNTSVILGLKFGSEPNEETINLIKLAKHLRLNLYGFSFHVGSPCREMK 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ + +L + L ++ GH+ + GG + + ++ + Sbjct: 207 AYKRGIELCKQLINISKAIGHDNVQLIDIGGGFPGENGTNADMFANIIN--DAIQDLDPS 264 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSAD----KTFVILDVAMNDFMRPTLYDAYHEIN 324 ++I EPG + VA L + S + + ++ + + L Sbjct: 265 IRVISEPGSYYVASSFTLAAYIHSKRITPKNGKMMRMYYMNCGVFNSFIDELLGLQSRTP 324 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 +++ + I GP ++ D I + + GD L + GAY + T+N Sbjct: 325 VLLSEPISNEKFLSSIWGPTADSCDVIVKEMMLPEVQIGDWLIWKDMGAYSTALATTFNG 384 Query: 385 R 385 Sbjct: 385 F 385 >gi|302524721|ref|ZP_07277063.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. AA4] gi|302433616|gb|EFL05432.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. AA4] Length = 502 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 70/379 (18%), Positives = 133/379 (35%), Gaps = 19/379 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP + + + YA+KAN V++ + G+G D+ E Sbjct: 18 PTPCLVVDLDVVRGSCARLRAVLPE--ARMYYAVKANPAPEVVRVVRQAGAGFDVAGREE 75 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + LA V E + + K +I+ A + G+ F +S +L+ L + A Sbjct: 76 IELCLAQGVRPESLSYGNPVKKARDIEFAHRVGVRRFTFDSREDLEKLAEFAPGATVSCR 135 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I + KFG L A+ L + G+ H+GSQ Sbjct: 136 ILVD----------SPGALTPFGRKFGCDPAMAAELLVRAAELG-LDPEGIAFHVGSQHV 184 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ-YF 264 ++ ++T+ + G +++ +++GGG + Y ++ Sbjct: 185 DPRAWEAGIAAAGEVTRAVAQRGVSLRGLNIGGGFPVGYLTEPPSLEEYAAVIRDAVGRH 244 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + ++ EPGR +VA G++ ++V+ + + + I Sbjct: 245 FAVAPELSFEPGRAVVASAGVIRSEVVLVSRKSAADEKRWVYLDIGRYGGLAETENEAIA 304 Query: 325 YIVNPAGD-RLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKTGAYGAVQSG 380 Y + A D + GP C+ D + ++ L R GD + I GAY S Sbjct: 305 YRLVTAHDGGPDGPVVVAGPTCDGDDVLYQRTPYRLPLALRAGDYVDIPHAGAYTQSYSS 364 Query: 381 -TYNSRLLIPEIMVNGSQF 398 ++N + + G Sbjct: 365 VSFNGFPPLRAYFIGGESA 383 >gi|213418015|ref|ZP_03351093.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 110 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 7/110 (6%) Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN-------RKIALPRPGDLL 366 Y + + + + GP+CE+GD R + PGD L Sbjct: 1 YGSYHRISALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYL 60 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 + TGAYGA S YNSR L+PE++ + Q +IR R T +EL+ L+ + Sbjct: 61 VLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALEML 110 >gi|152984562|ref|YP_001350471.1| ornithine decarboxylase [Pseudomonas aeruginosa PA7] gi|150959720|gb|ABR81745.1| ornithine decarboxylase [Pseudomonas aeruginosa PA7] Length = 387 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF I Y ++ F + YA+KAN + + L GS DI Sbjct: 21 ADKQETPFVVIDRQTIADAYDQLTDCFPF--ARIYYAVKANPATEITELLRDKGSNFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + L V ERI + K +I + G+ F +S E N + G Sbjct: 79 SIYELDKVLKTGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L ++ G+ H+G Sbjct: 137 AKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARQLG-LEPYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIVLKMINMGGGFPANYITKTNDLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + A + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYADVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + + K + L GD LY TGAY Sbjct: 309 MDESIKFPIWTEKQGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLSSGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|325660854|ref|ZP_08149482.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium 4_1_37FAA] gi|325472928|gb|EGC76138.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium 4_1_37FAA] Length = 378 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 59/391 (15%), Positives = 114/391 (29%), Gaps = 27/391 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 VV TP++ + N + + A KA S +V L G Sbjct: 7 EVVSTPYFVVDERRLLHNLEILKQVAEESGCKILLAQKAFSMFSVYPLLRKYLCGTTASG 66 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R E VFS + + +L FN ++ + + Sbjct: 67 LYEARLGKE-EFGGETHVFSPAYRAEEFDELLQYVDDLVFNSPAQVRKYGIRAKNAGKSI 125 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + H + G + ++ + I Sbjct: 126 GLRVNPECSTQ---EGHAIYDPCAPGSRLGTTLEAFEE-----------ELVPLLDGIHM 171 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ K + L + ++ +++GGG I R I + Sbjct: 172 HTLCEQNSDDLEKTVEALEDKFGKWLPQMKWLNLGGGHHITRADYDRERLVRI----IRR 227 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 Q ++ LEPG +V + G LV V+ + + + + P + + + Sbjct: 228 LREKYQLEVYLEPGEAVVLNAGDLVASVM--EIVHNNMEIAILDTSAACHMPDVLEMPYR 285 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + GP C GD I G + E Y V++ T+ Sbjct: 286 PPVQKSGNPGEKQYTYRFAGPTCLAGDVIGDYSFEKPLTEGSRVVFEDMALYTMVKTNTF 345 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMT--FQEL 410 N L + + + H++R T +++ Sbjct: 346 NGMALPSIVFRDQEGEEHLVR---TFGYEDF 373 >gi|226493711|ref|NP_001142154.1| hypothetical protein LOC100274319 [Zea mays] gi|194707370|gb|ACF87769.1| unknown [Zea mays] Length = 412 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 120/360 (33%), Gaps = 14/360 (3%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 T F+ + + + Y + D YA+K N A++ LA LG+G D S E+ Sbjct: 53 TAFHVFRIDNVLELYSAWRRGLP--DVRPYYAVKCNPEPALLGALAELGAGFDCASRAEI 110 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 LA VP I+++ K+ ++ A +G+ ++E E+ + + Sbjct: 111 EAVLALGVPPSSIIYANPCKSEPHLEYAAAAGVNLTTYDTEEEVAKVKRCHPRCE----- 165 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + K + + + ++ T+ GV + + Sbjct: 166 LLLRLKGPDGSETTCDLGTKYGARADEVVPLLRAVQRAGVTVAGVSFHVGSPVARVGVYR 225 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + ++ +D+GGG D +D +L + Sbjct: 226 AAIEAA----RAAFDEAAALGMPPMRVLDIGGGFTAGASFDDAAAVIND--ALARSFGDL 279 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++I EPGR+ L +VI + + +D + + L D Sbjct: 280 PCVEVIGEPGRYFCETAFTLAARVIGKRTRGEVREYWIDDGLYGSLNNILMDHKVPRPRP 339 Query: 327 VNPAGDRL-HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + + GP C++ D + ++ GD L + GAY +N Sbjct: 340 LATPRPGDRTHTSTVFGPTCDSQDEVVTGYQLPEMSVGDWLVFDNMGAYSTGSGSKFNGF 399 >gi|240145064|ref|ZP_04743665.1| carboxynorspermidine decarboxylase [Roseburia intestinalis L1-82] gi|257202890|gb|EEV01175.1| carboxynorspermidine decarboxylase [Roseburia intestinalis L1-82] gi|291535389|emb|CBL08501.1| carboxynorspermidine decarboxylase [Roseburia intestinalis M50/1] Length = 377 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 66/389 (16%), Positives = 113/389 (29%), Gaps = 21/389 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP Y +++N N V A KA S ++ + SG Sbjct: 4 QEIPTPCYVVDEKKLKQNLKILQNLEQETGCHVLLAQKAFSMFSLYPLIGQYISGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + E VF+ K D +L FN ++ E Sbjct: 64 IFEARLGKE-EMGKENHVFAPAYKEKDMEELVQICDHVIFNSFAQYEKYQHYFLQQECTA 122 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 A I G + L L + Sbjct: 123 SAGIRVNPECSTQEGHEIYDPCGPGSRLGVVKSEFPDQLPEGIEGLHFHTLCE------- 175 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ ++ S ++ +++GGG I + + Sbjct: 176 -----QNADDLITTWHAFEEKFGSYLKQVKWLNLGGGHHITRADYQLDELKKLICEIRRK 230 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 Y ++ LEPG + + G LVT+V+ I +ILD + M L Y Sbjct: 231 YNV----RVYLEPGEAIALNAGYLVTEVMDIVH-NGMDILILDASAACHMPDVLEMPYRP 285 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 G++ H + C GD I + GD L E Y V++ T+ Sbjct: 286 PLKDGYLPGEKPH-TCRLSSMTCLAGDVIGDYSFAQKKQVGDRLVFEDMAIYSMVKNNTF 344 Query: 383 NSRLLIPE-IMVNGSQFHIIRPRMTFQEL 410 N L ++ +I+ +++ Sbjct: 345 NGMPLPGIAVLREDGDVEMIKE-FGYEDF 372 >gi|296534024|ref|ZP_06896539.1| possible lysine decarboxylase [Roseomonas cervicalis ATCC 49957] gi|296265643|gb|EFH11753.1| possible lysine decarboxylase [Roseomonas cervicalis ATCC 49957] Length = 376 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 86/371 (23%), Positives = 135/371 (36%), Gaps = 20/371 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP + +NY A + YA+KAN ++ L L S D S E+ Sbjct: 16 TPCLVVDVDRVAENYGRLKAAMPL--ARIYYAVKANPAAPILSRLVDLQSQFDAASLEEV 73 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R LAA E I F K I A ++G+ F +SE EL+ L + A I Sbjct: 74 RMCLAAGARPEAISFGNTVKKESAIQAAYEAGVRMFAFDSEPELRKLARSAPGAKVYCRI 133 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 KFG L A L + G+ H+GSQ + Sbjct: 134 LVENVGA----------EWPLSRKFGCEAEMAKELMVLARDLG-LDPYGISFHVGSQQTR 182 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ A + + L+ G N++ ++GGG + Y S+ A + Sbjct: 183 TAAYEAAIAKVAMIFTDLKEAGINLRMANLGGGYPVRYRSEVPEIDDFGAAIMGAMVEHF 242 Query: 267 LQ--CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +I++EPGRF+V D G+L ++V+ + V I Sbjct: 243 GNALPEILVEPGRFIVGDAGVLSSEVVLVSSKGKDDPVRWVYLDIGRFGGLAETEGEAIK 302 Query: 325 YIVNPAGDR-LHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSG 380 Y D I GP C++ D + N ++ L + GD + + TGAY + Sbjct: 303 YRFRTPHDGLAEGPVTIAGPTCDSTDTLYEKSNYRLPLALQSGDRVELLSTGAYVTTYAS 362 Query: 381 T-YNSRLLIPE 390 +N + E Sbjct: 363 QGFNGFAPLAE 373 >gi|13774332|gb|AAK38838.1| ornithine decarboxylase [Oculimacula yallundae] Length = 448 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 75/382 (19%), Positives = 138/382 (36%), Gaps = 36/382 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + ++ + + YA+K N + VI+ LA LG+G D S+ E+ + Sbjct: 70 FFVADLGEVYRQHMRWKLNLPRVKP--FYAVKCNPDNRVIQLLAALGTGFDCASKAEIEQ 127 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + A V RI+++ KT + A + ++ EL + + I Sbjct: 128 VIKADVDPSRIIYAQPCKTNSYVRYAANHNVKQMTFDNADELHKVKKLFPGAELFLRI-- 185 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +T S + KFG + L A A L + + GV H+GS Sbjct: 186 --------STDDSSSLCRLSLKFGAAMDTTDGLLALAKELD-LNVVGVSFHVGSGASDPL 236 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ +A + R + Q ++G ++ +D+GGG + Sbjct: 237 AYMRAVQDARLVFDQAAAHGFSLHTLDIGGGFVSESFEAMASVLCEAL-----DTYMPSH 291 Query: 269 CKIILEPGRFLVADVGILVTKVISIKK------SADKTFVILDVAMNDFMRPTLYDAYHE 322 II EPGR+ V+ + +I+ + S + L+ + ++D + Sbjct: 292 INIIGEPGRYYVSSAFSVACHIIARRTIVEPASSEKSYMIYLNDGLYGNFSSIMFDHQNP 351 Query: 323 -----------INYIVNPAGDRLHIHADIVGPICETGDFIALN-RKIALPRPGDLLYIEK 370 + I GP C+ D I+ + R GD LY E+ Sbjct: 352 IAQVLRTGDRTYFNNIAAQDSVDGTEYSIWGPTCDGIDRISESIRFDHTLDVGDWLYFEE 411 Query: 371 TGAYGAVQSGTYNSRLLIPEIM 392 GAY + +N E++ Sbjct: 412 MGAYTKCSATRFNGFSDAHEVI 433 >gi|323465202|gb|ADX77355.1| pyridoxal-dependent decarboxylase [Staphylococcus pseudintermedius ED99] Length = 400 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 88/371 (23%), Positives = 147/371 (39%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 + Y + ++ T ++ + + YA+KANS ++ + +G ++ SEGE+ +A Sbjct: 20 FIYDMDGLRQHLETVTSQLPD-NCEMYYAMKANSEFEILAAIQPHVAGFEVASEGEIAKA 78 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L AE ++F G GKT + + A+Q GI +VES EL+ LN I R Sbjct: 79 L-VHTTAEHVIFGGPGKTDESLRYAIQQGIRRIHVESLYELERLNALLKQENATMSILLR 137 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN G+ +FGI ++ ++ A A +P +++ G H S Sbjct: 138 VNLAGPFPAATLHMAGQP-TQFGIDETEVDTVIATAQNMPRIQLEGFHFHSISNNLDAAL 196 Query: 210 FHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + L + + +QH++VGGG+G+ Y + + + + + Sbjct: 197 HLQVMTLYFQKAKAWAAQHDFTLQHLNVGGGIGVNYADLNEQFDWTYFTTELSALIEEEG 256 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + I E GR++VA +G VT+V+ IK+ F IL F P + H Sbjct: 257 LQNITINFECGRYMVAHIGYYVTEVLDIKRVHGAWFAILKGGTQHFRLPVSWQHNHPFEI 316 Query: 326 -------IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 VG +C D A +I GD + GAYG Sbjct: 317 LSLGEQANQIAPRTIEQQAVTFVGQLCTPKDVFAKAVEIPALSTGDAVIFIYAGAYGWSI 376 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 377 SHHDFLSHPHP 387 >gi|317051695|ref|YP_004112811.1| carboxynorspermidine decarboxylase [Desulfurispirillum indicum S5] gi|316946779|gb|ADU66255.1| carboxynorspermidine decarboxylase [Desulfurispirillum indicum S5] Length = 377 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 64/391 (16%), Positives = 118/391 (30%), Gaps = 24/391 (6%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 +A V TP Y ++ N + ALK + + + + G Sbjct: 4 DIA-QVPTPCYVLEEEKLQHNLNILDRVQRESGAKILLALKGFAMWSTFPMIREVLHGTA 62 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 E R + E FS ++ S FN S+ E Q + Sbjct: 63 ASGLHEARLGCE-EMGREVHTFSPAFTEESLREILGYSDHIVFNSFSQWERL---QHVIR 118 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + RVNP+ + + +FG+ Q + Sbjct: 119 EKEGVSCGIRVNPEYSEVEPPIYNPCVAFSRFGVTRDQFRP-----------DLLDGLDG 167 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 I ++ + L + + ++ ++ GGG I + Sbjct: 168 IHFHTHCEQNSDALERTLEVVEAKFSQFFPQLKWVNFGGGHHITRAD----YDVDRLIRI 223 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 I Q+ +I LEPG + G LV V+ I + + + A P + + Sbjct: 224 IQQFRHRYNLEIYLEPGEAVGWQTGPLVASVVDILHNG--MDIAILDASAAAHMPDVLEM 281 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + L + G C GD I + +PGD + E Y V++ Sbjct: 282 PYRPAIRGAAEPGELPFTYRLGGNTCLAGDVIGDYSFASPLQPGDRIVFEDMTHYTMVKN 341 Query: 380 GTYNSRLLIPEIMVNG-SQFHIIRPRMTFQE 409 T+N L + + ++R +++ Sbjct: 342 NTFNGVPLPSIAIWRKSGRLDVVRK-FGYED 371 >gi|197119289|ref|YP_002139716.1| carboxynorspermidine/carboxyspermidine decarboxylase [Geobacter bemidjiensis Bem] gi|197088649|gb|ACH39920.1| carboxynorspermidine/carboxyspermidine decarboxylase [Geobacter bemidjiensis Bem] Length = 384 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 74/379 (19%), Positives = 125/379 (32%), Gaps = 25/379 (6%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 LH E + +LA +P Y + N + + ALKA S +V Sbjct: 3 KLHVEEM--TRLA---PSPSYVVDLGRLRHNLAILNEVQKKSGAKILLALKAFSMWSVFP 57 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 +A+ G+ S E R + E FS K D ++L S FN ++ E Sbjct: 58 IIANTLHGVCASSPWEARLGME-EFGGEVHSFSAAFKESDVVELLTTSNHLVFNSFNQLE 116 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 K + RVNP + + + G I + + Sbjct: 117 RFRP--LWEQYAGKVSVGLRVNPGHSEGHTPIYDPAAPKSRLG--ILRSEFDDKSLQGVE 172 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 G+ + + + R +Q ++ +++GGG +H Sbjct: 173 GLHFHTLCEQLF---------EPLERTARVFEEQFGEFLPRMKWLNLGGG----HHITRE 219 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 L+ + ++ LEPG + GILV++V+ + + +LDV+ Sbjct: 220 GYDVDALIKLVRYFREKYDLEVYLEPGEAIAIGTGILVSEVLDVVH-NEVDIAVLDVSAT 278 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 M L Y AG++ H + GP C GD I G+ L Sbjct: 279 CHMPDILEMPYRPEILGGYDAGEKAH-DYRLGGPSCLAGDVIGDWSFDHPLAVGEKLAFL 337 Query: 370 KTGAYGAVQSGTYNSRLLI 388 Y V++ T+N Sbjct: 338 DMSHYTMVKTTTFNGIQHP 356 >gi|307189142|gb|EFN73590.1| Ornithine decarboxylase [Camponotus floridanus] Length = 403 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 75/361 (20%), Positives = 124/361 (34%), Gaps = 18/361 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + + + YA+K N + VIK LA L +G D SE E+R Sbjct: 35 FYIVDIGDVINKHREWITKIPR--VVPHYAVKCNPDPTVIKILAALNAGFDCASEQEIRL 92 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V A RIVF+ K I + + GI V+SE E+ + I Sbjct: 93 VMQYGVHANRIVFTNPCKYPSHIKYSKKMGINQLTVDSELEILKIKDLYPEAK----IVI 148 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+ D K S KFG + + + G H+GS + Sbjct: 149 RMQYDA------KNSDANFGLKFGCESDEEAVRLIQLMMDLDLTLHGFSFHVGSPCRDLN 202 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F+K + + L ++ G + GG ++ + Sbjct: 203 AFNKTIGMCKRLITIAKTMGCEDVQLIDIGGGFPGERGTEIDEFANIIN--DAIQDLDPS 260 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADK----TFVILDVAMNDFMRPTLYDAYHEIN 324 K+I EPGR+ + L + S + S + ++V + + L + Sbjct: 261 IKVISEPGRYYITSAFTLAAYLHSKRLSHNNGKITRMYYINVGVYNSFIEELLGLKFRVP 320 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 I+ + + GP C++ D I + GD L E GAY +N Sbjct: 321 QILFKPASNEKFLSTLWGPTCDSFDVIVQEVMLPELHLGDWLVWEDMGAYTISICTKFNG 380 Query: 385 R 385 Sbjct: 381 F 381 >gi|302818156|ref|XP_002990752.1| hypothetical protein SELMODRAFT_236110 [Selaginella moellendorffii] gi|300141490|gb|EFJ08201.1| hypothetical protein SELMODRAFT_236110 [Selaginella moellendorffii] Length = 146 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 1/141 (0%) Query: 273 LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 +EPGR LVA+ LV +V +K + +K F+++D +M++ +RP+LYDAY I + D Sbjct: 1 MEPGRSLVANAAALVNRVTGVKTNGNKNFIVIDGSMSELIRPSLYDAYQHIELVAPAGSD 60 Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 D+VGP+CE+ DF+ NR++ P+ GD + + GAY + TYN ++ PE Sbjct: 61 AEVKTYDVVGPVCESADFLGKNRELPTPKRGDGIVVHDAGAYCMSMASTYNLKMRPPEYW 120 Query: 393 V-NGSQFHIIRPRMTFQELIE 412 + + IR TF + + Sbjct: 121 IEDDGSITKIRHAETFDDHLR 141 >gi|297161700|gb|ADI11412.1| diaminopimelate decarboxylase [Streptomyces bingchenggensis BCW-1] Length = 408 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 85/373 (22%), Positives = 136/373 (36%), Gaps = 14/373 (3%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y TA+ ++ A + YA KAN +++ LA +G ++ S GE Sbjct: 27 PAYVYDLTALAEHAEAVRAALPPA-VELYYAAKANPALEILRALAPHVTGYEVSSGGESA 85 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A PA + F G GKT E+ AL+ G+ F+VESE EL+ L A G+ I Sbjct: 86 HVREAV-PAHPLAFGGPGKTEAELRRALKLGVERFHVESEHELRQLAALADEEGRTVDIL 144 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL---PGVKISGVDMHIGSQI 204 RVN + + + + H L +++ G+ H+ S + Sbjct: 145 LRVNLPVADDALGAAALAMGGRPSPFGLDPDHIAERCLPLLTPGGPLRLRGIHAHLASGL 204 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 D A ++ +G + ++VGGG+ + Y + Y + + Sbjct: 205 DAPALLAVATRITDWTRNLSARHGLRLTEVNVGGGMSVDYDRPDSRFDWAAYGRGLAEVA 264 Query: 265 GNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + +EPGR L G VT+V+ +K S + F +L + P H Sbjct: 265 ERNPELTLRIEPGRALTVYCGWYVTEVLDLKHSGGEPFAVLRGGTHHMRTPAAKGHDHPF 324 Query: 324 -------NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 P +VG +C D +A R GD + GAY Sbjct: 325 AVLPADTWTHPWPRPGVRDEPVTLVGQLCTPKDVLARRAPAGELRVGDRVAFALAGAYAW 384 Query: 377 VQSGT-YNSRLLI 388 S + Sbjct: 385 NISHHDFLMHPRP 397 >gi|169351540|ref|ZP_02868478.1| hypothetical protein CLOSPI_02320 [Clostridium spiroforme DSM 1552] gi|169291762|gb|EDS73895.1| hypothetical protein CLOSPI_02320 [Clostridium spiroforme DSM 1552] Length = 369 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 123/384 (32%), Gaps = 22/384 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y ++KN + + A K S +V + G E Sbjct: 3 TPYYLIDEELLKKNLKVLHYVKEKTGCKILLAQKCFSMFSVYPLIRKYLDGTTASGLFEA 62 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + + E V+S + + ++ FN ++ + + I Sbjct: 63 KLGYE-EMKKENHVYSAAYRDDEIEEIMNICDHVVFNSFNQWAKYKELAKKTNTSCGIRI 121 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + H+ K + G+ + L G++ D Sbjct: 122 NPECSTQV---GHEIYDPCAKYSRMGVTLENFQEDL-----LDGIEGLHFHTLCEQNSDD 173 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + + KA + ++ + ++ ++ GGG I ++I++ Sbjct: 174 LVTTIKAVE------EKFGKYLYQMKWLNFGGGHHITRDD----YDLETLINVINEIKEK 223 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 Q ++ LEPG + + G LV+ V+ I + ++ A +I Sbjct: 224 YQVQVYLEPGEAVALNAGFLVSSVLDIINNGIVIAIMDTSAACHMPDVLEMPYRPDIIDS 283 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 P + GP C GD I+ + G L+ + Y V++ T+N Sbjct: 284 DKPR--VKKYTYRLGGPTCLAGDVISDYSFDQPLKIGQQLWFKDMAIYSMVKNNTFNGMN 341 Query: 387 LIPEIMVNGSQFHIIRPRMTFQEL 410 L ++ G + +IR + + Sbjct: 342 LPSIVLKQGDKLKVIRE-FGYDDF 364 >gi|119627876|gb|EAX07471.1| arginine decarboxylase, isoform CRA_c [Homo sapiens] Length = 528 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 74/371 (19%), Positives = 130/371 (35%), Gaps = 30/371 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 109 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 166 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 +PA +I+ + K I +I A + GI + ++E EL + + S IA Sbjct: 167 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIA- 225 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG+ + L A V++ GV HIGS + Sbjct: 226 ---------TDDSHSLSCLSLKFGVSLKSCRHLLENAKKH-HVEVVGVSFHIGSGCPDPQ 275 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 276 AYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEG 335 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 I E GR+ V + +I+ K S + + + F Sbjct: 336 CGVDIFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIF 395 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P+ ++ + + GP + D +A + GD L + Sbjct: 396 NSVLFDNICPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNM 455 Query: 372 GAYGAVQSGTY 382 GAY + Sbjct: 456 GAYTVGMGSPF 466 >gi|118498282|ref|YP_899332.1| pyridoxal-dependent decarboxylase [Francisella tularensis subsp. novicida U112] gi|194323865|ref|ZP_03057640.1| Pyridoxal-dependent decarboxylase [Francisella tularensis subsp. novicida FTE] gi|118424188|gb|ABK90578.1| pyridoxal-dependent decarboxylase [Francisella novicida U112] gi|194321762|gb|EDX19245.1| Pyridoxal-dependent decarboxylase [Francisella tularensis subsp. novicida FTE] Length = 387 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 81/379 (21%), Positives = 149/379 (39%), Gaps = 9/379 (2%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ Y +E + + + YALKAN +IK D+ S GEL + Sbjct: 5 FFYYDLDMLEAHAKELH----RLPVKLWYALKANPLSRIIKVFDEQKISFDVASIGELDQ 60 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V + I+ +G K+ +++ L G+ F +ES ++ K L+ + Sbjct: 61 VLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSNLVEKKNINVKVLL 120 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST-LPGVKISGVDMHIGSQIDQI 207 RV N + + G FG+ I+ + A + I G+ I + Sbjct: 121 RVQLVWNDQENNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIGMHCFQWGNILCL 180 Query: 208 ESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF-G 265 + +++ + +++ ID+GGG+G+ Y++ + S +D ++ Sbjct: 181 NKLSQIWEITTKALLDLSEAINVSLKVIDLGGGIGVPYNAGQKSISINDLIFCFNKLKEE 240 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + LE GR+ VA+ G+ VTK++ K + ++ D +RP L Sbjct: 241 FPDIEYWLELGRYAVAESGVYVTKIVDRKSVNNIDLLVTDGGAQHLVRPALTGESFP-IQ 299 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNS 384 ++ I GP+C + D + D L ++TGAYG +S + Sbjct: 300 LLREEACGETNDFQIHGPLCTSLDKAGIASLPKDIGLNDYLIFKQTGAYGFTESMPLFLC 359 Query: 385 RLLIPEIMVNGSQFHIIRP 403 L E++ Q +R Sbjct: 360 HNLPAEVIFYKGQLQTVRQ 378 >gi|258566646|ref|XP_002584067.1| predicted protein [Uncinocarpus reesii 1704] gi|237905513|gb|EEP79914.1| predicted protein [Uncinocarpus reesii 1704] Length = 493 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 78/382 (20%), Positives = 135/382 (35%), Gaps = 39/382 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I +++ F YA+K N N ++ LA G+G D S+ E++R Sbjct: 40 FYVVDEEFIHSQLRMWASKFGH--VQPFYAVKCNDNPRLLSILAKHGTGFDCASQSEIKR 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V +RI+++ K+ D I A + G+ +SE EL+ L + + Sbjct: 98 ILDLGVKPDRILYAAPIKSEDHILYAKEHGVVQTMFDSEDELRKLVKLFPPAQLYLRLW- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S + DKFG+ + Q L A L + G+ H+GS + Sbjct: 157 ---------ADDPTSRVRLCDKFGVQLPQAKRLLTLARELNMT-VVGLCFHVGSSASDCD 206 Query: 209 SFHKA----FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 ++ +A ++ H I+ IDVGGG + + + Sbjct: 207 AYRRAIALSREVYDYNESFGADKRHPIRTIDVGGGFSRGNFDNAVRAINEGI---QEHFG 263 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSA--------------DKTFVILDVAMND 310 + Q + + EPGR+ + LV +VI + ++ + N Sbjct: 264 ADNQLRWVAEPGRYFPDEAFHLVCRVIGTRPRPSLSDEPPPGEAFPVGDVYINDGIYRNF 323 Query: 311 FMRPTLYDAYH----EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDL 365 T + GD + G C++ D I + + + GD Sbjct: 324 LNAITEQVVPPARLLDCTGSPYVRGDDTEDTYVLWGQTCDSFDKINSSCVLPRRAKVGDW 383 Query: 366 LYIEKTGAYGAVQSGTYNSRLL 387 +Y GAY V + +N Sbjct: 384 VYFPSMGAYTHVTANDFNGFPK 405 >gi|304310859|ref|YP_003810457.1| Ornithine decarboxylase [gamma proteobacterium HdN1] gi|301796592|emb|CBL44804.1| Ornithine decarboxylase [gamma proteobacterium HdN1] Length = 387 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 146/404 (36%), Gaps = 38/404 (9%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F L TPF+ IE+ Y A +A+K Sbjct: 11 MHHFLEANPRLE--------------TPFFLIDLDLIEQQYRLLREALPFAAC--YFAMK 54 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 +NS+ AVI+ L LGS + S E+RR LA VP I F K I A + G++ Sbjct: 55 SNSSTAVIQRLNQLGSRFEAASIYEIRRCLALGVPPRDIHFGNTIKKDSHILEAYRLGVH 114 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 + +S EL+ + Q A +A T K + KFG + Sbjct: 115 SYAFDSSQELEKIAQLAPGSNVSCRLA----------TDGKGAVWGLCRKFGRDPDDVVE 164 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L YA +L ++ G+ H GSQ ++ + ++ D+ Q+L + I++GGG Sbjct: 165 LMKYAHSLG-LRAYGISFHTGSQQRSAGAWRRTIEICADIIQRLNQQQVYPRLINLGGGF 223 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFG------NLQCKIILEPGRFLVADVGILVTKVISIK 294 ++ D ++EPGRF+ A G++ VI + Sbjct: 224 PSYQYAGDEMQPQGDIFEYGKVIKTAVDELLPQGIDCVMEPGRFITAAAGLVKATVILVL 283 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 A V ++ LY++ I+ D I + GP C++ D + Sbjct: 284 DKATDGVPTRWVYLDAGRFNGLYESVDVEYPIITNRTDGTAIRTVLAGPTCDSDDVMYDR 343 Query: 355 ---RKIAL-PRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 + GD L GAY +N + E +V Sbjct: 344 DRAVFLPDTLTQGDSLIFTNAGAYSKSYMTVDFNGFPPMQEYVV 387 >gi|182418088|ref|ZP_02949391.1| carboxynorspermidine decarboxylase [Clostridium butyricum 5521] gi|237667715|ref|ZP_04527699.1| carboxynorspermidine decarboxylase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378057|gb|EDT75594.1| carboxynorspermidine decarboxylase [Clostridium butyricum 5521] gi|237656063|gb|EEP53619.1| carboxynorspermidine decarboxylase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 381 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 59/394 (14%), Positives = 121/394 (30%), Gaps = 20/394 (5%) Query: 18 LEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L+ + + +P Y + KN + A KA S + + Sbjct: 2 LKDIDIDKLPSPCYIVDERLLRKNLEVLDYVQKESGANIILATKAFSMFSTFPLIGKYLK 61 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G+ S E R + + +FS + + D+ S FN ++ +L ++ Sbjct: 62 GVTSSSLFEARLGYE-EMGKQVHIFSPAYREDEFEDIMKYSDHIIFNSFNQWKLYK-DRV 119 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 KK R+NP+ + + + + G+ + Sbjct: 120 KNYKDKKIQCGIRINPEYSEIETDIYNPCFENSRMGVTLKNFEENDLDGID--------- 170 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + ++ + ++ + + N++ ++ GGG I Sbjct: 171 --GLHFHTMCEQNSDTLARTIKVVDDKFGKYIKNMKWLNFGGGHHITRDD----YDLKTL 224 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + +I LEPG + + G LV+ V+ I + + + P + Sbjct: 225 IESVLYMKNKYNIEIYLEPGEAVALNSGFLVSTVLDITNNG--MDIAILDTSAACHMPDV 282 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 + + N I + GP C GD I + GD L Y Sbjct: 283 LEMPYRPNIIGSGKPYEYEYTYRFGGPTCLAGDIIGDYSFKEPLKVGDKLIFCDMAIYSM 342 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 V++ T+N L + + I +++ Sbjct: 343 VKNNTFNGINLPSIVKYSEENGVEIIKEFGYEDF 376 >gi|253988111|ref|YP_003039467.1| hypothetical protein PAU_00630 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779561|emb|CAQ82722.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 362 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 86/369 (23%), Positives = 156/369 (42%), Gaps = 18/369 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 + Y + I++ Y ++ + Y++KAN N ++ ++ LG ++ S GEL A Sbjct: 8 FIYRLSEIKERYNELKSSIPA--HRIYYSIKANPNIEILTFISQLGLKAEVSSPGELIIA 65 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 + A IV+ G GKTI +ID A + G+ F++ES SEL L+ +GK R Sbjct: 66 INAGFNPAYIVYGGPGKTIKDIDFAAEKGVNYFSLESLSELDKLDIVEKQIGKNFKRILR 125 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 + N + K FGI + ++ + A + G+ ++ G+QI++ Sbjct: 126 LFIPNNNGRLNMMMPNSK---FGITLEEVKNYVAN----GDNDVYGIHLYSGTQINETGF 178 Query: 210 FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC 269 + + +++ G+ +++++ GGGL + S Sbjct: 179 RASVIQTNQIVSEIESIIGYKLKYVNYGGGLEWPFMRS-----GKPIISPTKVEGILPDI 233 Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND---FMRPTLYDAYHEINYI 326 + E GR+LVA GIL T+++ +K+ +I+ +N ++ Sbjct: 234 ESCFEFGRYLVASCGILETEILDVKERNGYQILIISAGINILNGISASGRLIHQQPDFHV 293 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSR 385 N + + + I GP+C D++ LN + GD+L I GAY A + R Sbjct: 294 SNNKNNNIMLPTAIYGPLCTPVDYLTLNTLLPQLFQGDILTIPNCGAYAANTGISNFLMR 353 Query: 386 LLIPEIMVN 394 EI V Sbjct: 354 EPAQEITVE 362 >gi|24375622|ref|NP_719665.1| decarboxylase, pyridoxal-dependent [Shewanella oneidensis MR-1] gi|24350523|gb|AAN57109.1|AE015844_11 decarboxylase, pyridoxal-dependent [Shewanella oneidensis MR-1] Length = 391 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 86/378 (22%), Positives = 148/378 (39%), Gaps = 19/378 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +E+ A TPF T+ I K Y N+F D V YA+KAN ++ L GS Sbjct: 20 RIEEFAKDKATPFVVIDTSIIAKQYDDMVNSFPYAD--VYYAVKANPAAEILTLLKDKGS 77 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI S EL + V A+R+ + K ++ + G+ + +SE++L+ + + Sbjct: 78 NFDIASIYELDMVMNVGVTADRVSYGNTIKKRQDVRAFYERGVRMYASDSEADLRMIAEE 137 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + KFG + L A+ L ++ G+ Sbjct: 138 APGSRIYVRILTEGTDTAD---------WPLSRKFGCQNEMAYELLVLANELG-LEPYGI 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAYHSDHRPPSSS- 254 H+GSQ I ++ A ++ + +LR + ++ I++GGG Y Sbjct: 188 SFHVGSQQRDIGAWDSAIGKVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYA 247 Query: 255 -DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + FG+ +IILEPGR L+++ G+LV++V+ I K + Sbjct: 248 EQITHFLKEDFGDDLPQIILEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFS 307 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IA-LPRPGDLLYIEK 370 + I + + I GP C++ D + + + GD +Y Sbjct: 308 GLIETMDEAIKFPIFTHKQGELEKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLT 367 Query: 371 TGAYGAVQSGT-YNSRLL 387 GAY S +N Sbjct: 368 AGAYTTTYSAVCFNGFPP 385 >gi|83944313|ref|ZP_00956768.1| decarboxylase, pyridoxal-dependent [Sulfitobacter sp. EE-36] gi|83953354|ref|ZP_00962076.1| decarboxylase, pyridoxal-dependent [Sulfitobacter sp. NAS-14.1] gi|83842322|gb|EAP81490.1| decarboxylase, pyridoxal-dependent [Sulfitobacter sp. NAS-14.1] gi|83844857|gb|EAP82739.1| decarboxylase, pyridoxal-dependent [Sulfitobacter sp. EE-36] Length = 392 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 76/372 (20%), Positives = 136/372 (36%), Gaps = 20/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P S + Y D + YA+KAN +I+ L GSG D S E+ Sbjct: 34 PTLVVSRARVGVQYDALQAGLG--DARIHYAVKANPAPEIIRMLVERGSGFDAASRQEIE 91 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ +I F K +I A G+ F + E+EL + + A + Sbjct: 92 LCLSQGADPAKISFGNTIKRGVDIAFAHSIGVTMFAADCEAELDKIAEHAPGARVYIRLI 151 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + +K G + + +P G+ H+GSQ + Sbjct: 152 VEN-------SMADWPLTRKFGCAGSLLPSLLEYTKSVGLVP----YGLSFHVGSQTRRA 200 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS-SSDYASLIHQYFGN 266 E +H + L + GH++Q +++GGG + P + + Sbjct: 201 EYWHPVLDQVAPLWHAAKEAGHDLQLLNIGGGFPAYHGDPVDAPRGYAAAVVAAVKERFG 260 Query: 267 LQCKIILEPGRFLVADVGILVTKV-ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ EPGR +VA+ G + +V + +KSA+ + + + F + Sbjct: 261 EIPVLMAEPGRGMVAEAGHIAAEVLLVSRKSAEAARRWVYLDIGRFSGLAETEGEAIRYQ 320 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT- 381 V P + + GP C++ D + + L R GD + I+ GAY + S Sbjct: 321 FVTPHDGKPVGPCVLAGPSCDSADVLYEKNPVDLPLDLRDGDKVMIKNCGAYTSSYSSVG 380 Query: 382 YNSRLLIPEIMV 393 +N +++V Sbjct: 381 FNGFP-PLDVLV 391 >gi|325681251|ref|ZP_08160781.1| carboxynorspermidine decarboxylase [Ruminococcus albus 8] gi|324107173|gb|EGC01459.1| carboxynorspermidine decarboxylase [Ruminococcus albus 8] Length = 381 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 63/385 (16%), Positives = 116/385 (30%), Gaps = 22/385 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP Y S A++ N + + A KA S + + G E Sbjct: 14 TPCYLVSEKALKHNMEILLSVRKRTGCKILLAQKAFSMYSAYPLMRPYLDGTTASGLYEA 73 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E VF+ K D +L FN S + + G++ Sbjct: 74 KLGHD-EFGGETHVFAPAYKHEDMAELVKICDDIIFNSFS--QWRLHRDTVRKSGRRISC 130 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R NP + + + G+ ++ G++ + + Sbjct: 131 GIRCNPLYSEIETDIYNPCFTGSRLGVTPEN----------FESGELDGIEGLHFHTMCE 180 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + A + + + + ++ ++ GGG I + Sbjct: 181 QGADVFA-RTVPHIEKHFGGYLGQMKWLNFGGGHHITKAGYDVDL----LCRTVDYIQQK 235 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + G LVT+V+ F I+D + M L Y Sbjct: 236 YAVQVYLEPGEACALNAGWLVTQVLDTG-RNGTDFAIVDTSAACHMPDVLEMPYRPELIG 294 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 G++ H + GP C GD I A + GD L Y ++ T+N Sbjct: 295 AGEKGEKPH-TYRLGGPTCLAGDIIGDYSFDAPLKAGDRLVFCDMAIYSMCKNNTFNGMP 353 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQEL 410 L + ++ +++ Sbjct: 354 LPDIYLEKPDGSTELV-KHFGYEDF 377 >gi|218190653|gb|EEC73080.1| hypothetical protein OsI_07045 [Oryza sativa Indica Group] gi|222622767|gb|EEE56899.1| hypothetical protein OsJ_06555 [Oryza sativa Japonica Group] Length = 229 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 113/206 (54%), Gaps = 3/206 (1%) Query: 210 FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-AYHSDHRPPSSSDYASLIHQYFGNLQ 268 F A L+ + ++R+ G ++++++GGGLGI +H+D P+ D + + + + Sbjct: 19 FRDAAGLMVNYVDEIRAQGFELEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVLSRD 78 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 +I+EPGR L+A+ V +V +K + K F+++D +M + +RP+LY AY +V+ Sbjct: 79 LTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQH-IELVS 137 Query: 329 PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 P+ D DIVGP+CE+ DF+ +R++ P G L + GAY + TYN +L Sbjct: 138 PSPDAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKLRP 197 Query: 389 PEIMV-NGSQFHIIRPRMTFQELIEL 413 PE V + IR +F + ++ Sbjct: 198 PEYWVEDDGSIAKIRRGESFDDYMKF 223 >gi|253699937|ref|YP_003021126.1| carboxynorspermidine decarboxylase [Geobacter sp. M21] gi|251774787|gb|ACT17368.1| carboxynorspermidine decarboxylase [Geobacter sp. M21] Length = 384 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 73/379 (19%), Positives = 123/379 (32%), Gaps = 25/379 (6%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 LH E + +LA +P Y + N + ALKA S +V Sbjct: 3 KLHVEEM--TRLA---PSPSYVVDLGRLRHNLAILDEVQQKSGAKILLALKAFSMWSVFP 57 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 +A G+ S E R + E FS K D ++L S FN ++ E Sbjct: 58 IIAETLHGVCASSPWEARLGME-EFGGEVHSFSAAFKESDVVELLSTSNHLVFNSFNQLE 116 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 K + RVNP + + + G I + + Sbjct: 117 RFRP--LWERHAGKVSVGLRVNPGHSEGHTPIYDPAAPKSRLG--ILRSEFEGKSLQGVE 172 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 G+ + + + R ++ ++ +++GGG +H Sbjct: 173 GLHFHTLCEQLF---------EPLERTARAFEEKFGEFLPRMKWLNLGGG----HHITRE 219 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 L+ + ++ LEPG + GILV++V+ + + +LDV+ Sbjct: 220 GYDVDALIELVRYFREKYDLEVYLEPGEAIAIGTGILVSEVLDVVH-NEVDIAVLDVSAT 278 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 M L Y AG++ H + GP C GD I G+ L Sbjct: 279 CHMPDILEMPYRPEILGGYDAGEKAH-DYRLGGPSCLAGDVIGDWSFDHPLAVGEKLAFL 337 Query: 370 KTGAYGAVQSGTYNSRLLI 388 Y V++ T+N Sbjct: 338 DMSHYTMVKTTTFNGIQHP 356 >gi|187933334|ref|YP_001885214.1| carboxynorspermidine decarboxylase [Clostridium botulinum B str. Eklund 17B] gi|187721487|gb|ACD22708.1| carboxynorspermidine decarboxylase [Clostridium botulinum B str. Eklund 17B] Length = 380 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 62/396 (15%), Positives = 127/396 (32%), Gaps = 23/396 (5%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 ++ L+KL +P Y ++KN + + A KA S + + Sbjct: 4 DIDLKKL----PSPCYLVDERLLKKNLERLNYVQKETGANIILATKAFSMYSTFPLIGKY 59 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+ S E R + + ++S + + ++ FN ++ + Sbjct: 60 LKGVTSSSLFEARLGYE-EMGKQVHIYSPAYRQDEFDEIMKYCDHIIFNSFNQW-RLYKD 117 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + KK R+NP+ + + + + G+ + + Sbjct: 118 KVKKYKNKKIECGIRINPEYSEIETDIYNPCFENSRMGVSLEN----------FKSEDLY 167 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+D + + S A + ++ + + ++ ++ GGG I Sbjct: 168 GIDGVHFHTMCEQNSDTLA-RTIKVVDKNFGKYIKKMKWLNFGGGHHITREDYDINTLIE 226 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + ++Y I LEPG + + G LV V+ I I+D + M Sbjct: 227 TILYMKNKYEI----DIYLEPGEAVALNSGFLVCTVLDI-IKNGMNIAIVDTSAACHMPD 281 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 L Y + + P C GD I + GD L Y Sbjct: 282 VLEMPYRPHIINSGMSNQYE-YAYRLGAPTCLAGDIIGDYSFKEPLKVGDKLVFCDMAIY 340 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 V++ T+N L + + + I + +++ Sbjct: 341 SMVKNNTFNGINLPAIVKYSDEKGVEIIKKFGYEDF 376 >gi|242050042|ref|XP_002462765.1| hypothetical protein SORBIDRAFT_02g031570 [Sorghum bicolor] gi|241926142|gb|EER99286.1| hypothetical protein SORBIDRAFT_02g031570 [Sorghum bicolor] Length = 413 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 68/357 (19%), Positives = 127/357 (35%), Gaps = 14/357 (3%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + + A D CYA+K N + A++ LA LG+G D S E+ Sbjct: 56 FYVLDLAKVVDLFRAWRRALP--DARPCYAVKCNPDPALLGALAALGAGFDCASRAEIEA 113 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V IV++ K ++ A + G+ +SE E+ + + + Sbjct: 114 VLALGVQPRDIVYANPCKPEAHLEYAAEVGVNLTTYDSEEEVAKVRRCHPACE-----LL 168 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + + K + + A+ GV ++GV H+GS + Sbjct: 169 LRLKGPDGGGVRVDLGTKYGAHADEVVPLLR-----AAQRAGVGVAGVSFHVGSGASILA 223 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A + R + G + GG ++ + + + A H + Sbjct: 224 VYSGAIQAARAAFDAAAALGMPPMRVLDIGGGFVSGPTFDDAAAVINDALAQH-FGDLPC 282 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI-V 327 ++I EPGR+ L +VI + + +D + + + D Y Sbjct: 283 VEVIGEPGRYFAETAFTLAARVIGKRTRGEVREYWIDDGLYGSLNCVIMDHYVPTPRPLA 342 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 +P + + GP C++ D + ++ GD L + GAY +N Sbjct: 343 SPRPGDKTYTSTVFGPTCDSFDTVVTGYQLPEMSVGDWLVFDDMGAYTTGAGSNFNG 399 >gi|237797831|ref|ZP_04586292.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020681|gb|EGI00738.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 96 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 1/85 (1%) Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 D DIVGPICETGDF+A R++A GDLL + GAYG V S YN+R E+ Sbjct: 10 DGEARAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRAAEV 68 Query: 392 MVNGSQFHIIRPRMTFQELIELDSI 416 +V+G+Q +R R T EL +S+ Sbjct: 69 LVDGTQAFEVRRRETVAELFAGESL 93 >gi|169835507|ref|ZP_02868695.1| diaminopimelate decarboxylase [candidate division TM7 single-cell isolate TM7a] Length = 256 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 11/244 (4%) Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 + P ++ G HIGSQI Q F A + +L+ + H GG Sbjct: 11 KRLNDSPYIEFKGFHTHIGSQIFQSAFFIFALDEIFKYLDRLKKELGIVVHTVNMGGGFG 70 Query: 243 AYHSDHRPPSSSD--------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 Y+ + P + Y + + ++ +EPGR +V + G + +V IK Sbjct: 71 VYYKNGDDPKPIEEVLSEIITYTEAMEIKYQIGFKELCIEPGRSIVGNAGTTLYEVGGIK 130 Query: 295 KS-ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 ++ KT+V +D M+D +R LY A +E +VN D + G +CE+GD I Sbjct: 131 ETVGGKTYVFIDGGMSDNIRTALYQAEYE-AGVVNKMEDTDTRDVTLAGKLCESGDIIIQ 189 Query: 354 NRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N K+ + GD++ + TGAY S YN + + V + + R ++++L+ Sbjct: 190 NGKLPKSTKVGDIVAVGTTGAYCYTMSSHYNRMVTPGVVFVKDGKAKVAVRRESYEDLLR 249 Query: 413 LDSI 416 D I Sbjct: 250 NDEI 253 >gi|319408973|emb|CBI82632.1| lysine/ornithine decarboxylase [Bartonella schoenbuchensis R1] Length = 377 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 89/365 (24%), Positives = 143/365 (39%), Gaps = 20/365 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + +NYL F A + YA+KAN ++ L LGS D S E++ Sbjct: 18 PCLIVDLDVVRENYLNFEKALPQS--RIFYAIKANPAPEILSLLTSLGSSFDAASVAEIK 75 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL A AERI F K +I A GI + V+ E++ + + A I Sbjct: 76 MALEAGATAERISFGNTIKKERDIAYAHTLGISLYAVDCVEEVEKIARAAPGARVFCRIL 135 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T+ + + KFG + A L ++ GV H+GSQ + Sbjct: 136 ----------TNGEGAEWPLSRKFGCVPDMAVDVLRRAHQLG-LQAYGVSFHVGSQQTHL 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYFG 265 ++ A + + ++L G ++ +++GGG Y + A +YFG Sbjct: 185 NAWDHALSDVALVFERLEKEGIQLKLVNMGGGFPARYLKEVPTAQVYGIAIFDSLKKYFG 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N + I+EPGR +V + G++ T+V+ I K AD + I Y Sbjct: 245 NRIPETIIEPGRAIVGNAGVIRTEVVLISKKADNDNIRWVYLDVGKFNGLAETMGEAIRY 304 Query: 326 IVN-PAGDRLHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 + D+ + GP C++ D + + L GD L I TGAY + Sbjct: 305 PIETIHDDKAMEPCILAGPTCDSADVMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASV 364 Query: 382 -YNSR 385 +N Sbjct: 365 AFNGF 369 >gi|251779914|ref|ZP_04822834.1| carboxynorspermidine decarboxylase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084229|gb|EES50119.1| carboxynorspermidine decarboxylase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 380 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 65/396 (16%), Positives = 128/396 (32%), Gaps = 23/396 (5%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 N+ L KL +P Y ++KN + + + A KA S + + Sbjct: 4 NIDLNKL----PSPCYLVDERLLKKNLERLNYVQEETGANIILATKAFSMYSTFPLIGRY 59 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+ S E R + + +FS + + ++ FN ++ +L + Sbjct: 60 LKGVTSSSLFEARLGYE-EMGKQVHIFSPAYRQDEFDEIMKYCDHIVFNSFNQWKLYK-D 117 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + KK R+NP+ + + + + G+ + + Sbjct: 118 RVKNYSNKKIECGIRINPEYSEIETDIYNPCFENSRMGVTLEN----------FKIEDLD 167 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+D + + S A + ++ + + N++ I+ GGG +H Sbjct: 168 GIDGLHFHTMCEQNSDTLA-RTIKVIDDKFGKYIKNMKWINFGGG----HHITREDYDME 222 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 +I I LEPG + + G LV ++ + I+D + M Sbjct: 223 TLLDIILYIKNKYDVDIYLEPGEAVALNSGFLVCTILDV-IKNGMNIAIVDTSAACHMPD 281 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 L Y + P C GD I + GD L Y Sbjct: 282 VLEMPYRPHIINSGMPNQYE-YTYRLGSPTCLAGDVIGDYSFKEPLKVGDKLVFCDMAIY 340 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 V++ T+N L + + + I + +++ Sbjct: 341 SMVKNNTFNGINLPAIVKYSDEKGVEIIKKFGYEDF 376 >gi|20091552|ref|NP_617627.1| ornithine decarboxylase [Methanosarcina acetivorans C2A] gi|19916709|gb|AAM06107.1| ornithine decarboxylase [Methanosarcina acetivorans C2A] Length = 390 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 94/373 (25%), Positives = 147/373 (39%), Gaps = 19/373 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPF IE++Y + YA+KAN V+ L GS D+ + EL Sbjct: 31 TPFLVIDLQKIERSYEELVEHMPF--AKIHYAVKANPMDRVVLALKDKGSNFDVATIYEL 88 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + L V ERI + K +I A + G+ F +SES+LK L++ A I Sbjct: 89 DQVLRLGVEPERISYGNTIKKEKDIAYAYEKGVRLFVTDSESDLKKLSREAPGSRVFFRI 148 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 T + KFG I+ L A L ++ G+ H+GSQ Sbjct: 149 L----------TESDGADWPLSRKFGSHPDLIYKLILKAEKLG-LEPYGLSFHVGSQQRD 197 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYF 264 I + A + L + G ++ I++GGG Y + + + +H F Sbjct: 198 IGQWDNAISKCKYLFEAAAEKGIQLKMINLGGGFPAKYQAQANDLETYAREIRRFLHDDF 257 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 G +I++EPGR LVAD GI+V++V+ I K A + I Sbjct: 258 GEELPEILIEPGRSLVADAGIIVSEVVMISKKARFNQYKWVYLDIGKFGGLIETLDECIK 317 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSG- 380 Y + + GP C++ D + + K + P R G+ YI TGAY Sbjct: 318 YPIFCDKKGCAEEVILAGPTCDSMDILYEHHKYSFPHTMREGNRAYIFTTGAYTQSYCSV 377 Query: 381 TYNSRLLIPEIMV 393 +N + ++ Sbjct: 378 NFNGFPPLKAYLI 390 >gi|320587267|gb|EFW99747.1| ornithine decarboxylase [Grosmannia clavigera kw1407] Length = 467 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 79/391 (20%), Positives = 134/391 (34%), Gaps = 49/391 (12%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + L + YA+K N + V++ LA LG+G D S+ E+ + Sbjct: 68 FFVADLGEVYRQQLRWKMNLPR--VRPFYAVKCNPDPKVLQLLAGLGNGFDCASKAEIEQ 125 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ KT + G+ ++ EL+ + + I Sbjct: 126 VLNMGVDPSRIIYAQPCKTNSYVRYVAAHGVRQMTFDNADELRKIARLFPDAELFLRIL- 184 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + SL A A L + + GV H+GS Sbjct: 185 ---------TDDSSSLCRLSLKFGASLDTTDSLLALARELG-LNVVGVSFHVGSGASDPS 234 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + + Q G++++ +DVGGG + +L + + Sbjct: 235 AFLKAVQDAHSVFLQAAEYGYSLKTLDVGGGFCSDATFEAMAEVLR--NALDEYFPAHRG 292 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFV--------------------ILDVAM 308 II EPGR+ V+ + VI+ + + ++ + Sbjct: 293 VSIIAEPGRYFVSSAFTIACNVIARRTVENPPQQQQREDAVDGIVAPADPTYMLYVNDGL 352 Query: 309 NDFMRPTLYDAYHEINY-------------IVNPAGDRLHIHADIVGPICETGDFIALN- 354 ++D H N + I GP C+ D I + Sbjct: 353 YGNFSSIMFDHQHPEAKVLQTGSRFLYDSETANAVAPTSGLEYSIWGPTCDGIDRITESI 412 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 R GD LY E GAY + +N Sbjct: 413 RFGHTLDVGDWLYFEDMGAYTRCSATRFNGF 443 >gi|73669670|ref|YP_305685.1| ornithine decarboxylase [Methanosarcina barkeri str. Fusaro] gi|72396832|gb|AAZ71105.1| ornithine decarboxylase [Methanosarcina barkeri str. Fusaro] Length = 390 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 150/373 (40%), Gaps = 19/373 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPF IE++Y + YA+KAN V+ L GS D+ + EL Sbjct: 31 TPFLTVDLQKIEQSYDELVEHMPF--AKIHYAVKANPMDEVVLALKSKGSNFDVATVYEL 88 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + L V ERI + K +I+ A + G+ + +S+S+LK L ++A I Sbjct: 89 DQLLRLGVEPERISYGNTIKKEKDIEYAYEKGVRLYVTDSDSDLKKLARKAPGSRVFFRI 148 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 T + KFG I+ L A L ++ G+ H+GSQ Sbjct: 149 L----------TESDGADWPLSKKFGSHPDLIYKLILKAEKLG-LEPYGLSFHVGSQQRD 197 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYF 264 I + A + L + G +++ I++GGG Y + + + +H+ F Sbjct: 198 IGQWDNAISKCKYLFEAAAEKGIHLKMINLGGGFPAKYQAQAHDLETYAGEIRRFLHEDF 257 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 G +II+EPGR LVA+ GI+V++V+ I K A + I Sbjct: 258 GEELPEIIIEPGRSLVANAGIIVSEVVMISKKARFNQYKWVYLDIGKFGGLIETLDECIK 317 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT 381 Y + + GP C++ D + + K P R G+ +YI GAY S Sbjct: 318 YPIFCDKKGCAEEVILAGPTCDSMDILYEHHKYTFPHTMREGNRVYIFTAGAYTQSYSSV 377 Query: 382 -YNSRLLIPEIMV 393 +N + ++ Sbjct: 378 CFNGFPPLKAYLI 390 >gi|302534846|ref|ZP_07287188.1| diaminopimelate decarboxylase [Streptomyces sp. C] gi|302443741|gb|EFL15557.1| diaminopimelate decarboxylase [Streptomyces sp. C] Length = 448 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 90/381 (23%), Positives = 153/381 (40%), Gaps = 18/381 (4%) Query: 47 AFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGK 106 G + +A+KA V++ L G G + S GEL A AA +PAER V K Sbjct: 56 VAPGTPVLHTFAVKAAPLVPVLRLLDACGLGCEAASPGELALARAAGIPAERTVLDSPAK 115 Query: 107 TIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK 166 T E+ AL GI N ++ EL+ L+ + ++P+ R+NP A + +ST Sbjct: 116 TAAELRGALALGIA-VNADNHQELERLDALVAAAPTRSPVGLRINPQTGAGSIDALSTAT 174 Query: 167 KEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 KFG + + ++ + H GSQ +E + + L L +++ Sbjct: 175 ATSKFGFALRDPGARERLVRAFAERPWLTRLHTHSGSQGVPLELIAEGVRELHGLAEEIN 234 Query: 226 SN--GHNIQHIDVGGGLGIAYHSDHRPP---SSSDYASLIHQYFGNLQCKIILEPGRFLV 280 + + +D+GGGL + + SD P + + ++ E GR L+ Sbjct: 235 AAVGERRVDTLDIGGGLPVDFASDEHAPSYAAYVAALRAAVPALFDGSYGLVTEFGRSLL 294 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG----DRLHI 336 A G+++ +V K + + + + R A + + A D + Sbjct: 295 AKHGLVLARVEYTKTTGGRRIALTHAGVQLATRTVYAPAAWPLRILAYDAQGTPRDGSPV 354 Query: 337 HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS 396 D+ GP C GD +A R++ PGD++ + TGAY YNS Sbjct: 355 PQDVAGPACFAGDLLATARELPELFPGDVIAVPDTGAYAFTAHYGYNSLPRPAVHGFTDG 414 Query: 397 -------QFHIIRPRMTFQEL 410 +F + RP + E+ Sbjct: 415 AAPGDGVRFTLARPAQSLTEI 435 >gi|283769531|ref|ZP_06342427.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Bulleidia extructa W1219] gi|283103799|gb|EFC05185.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Bulleidia extructa W1219] Length = 369 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 79/383 (20%), Positives = 152/383 (39%), Gaps = 24/383 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + K DG +CY++KAN ++++L L++ S GE+ Sbjct: 3 TPYYVMDENVLLKRICDIKKIADGKWG-LCYSIKANP--FLVESLFETVDQLEVCSPGEM 59 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + + VPA +I+ SGV KT+++I A G+ F+ ES + L + + +K Sbjct: 60 KICIDRKVPAFKILMSGVNKTVEDIQEAFDYGVRLFSFESIVHFERLQEVLKNSHEKVKA 119 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+ ++FG+ + L+ + P ++I G+ G+Q + Sbjct: 120 YIRL---------------TSGNQFGMSVEDTEYLFEH--PDPQIEIIGIHYFAGTQRKK 162 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + + L + ++ G GL + I + Sbjct: 163 SQHQISELEQLDAQLKLWEKKYRLSLALEYGPGLPVPLFVGDDFSEDLAPLKAIQDSLSS 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 L+ ++++E GRF+V + G ++V IKK D ILD ++ + Sbjct: 223 LKREVMVEMGRFMVYNCGSYYSQVQDIKKLNDSYVAILDGGIHHLNYYGQ--MMGMKVPL 280 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSR 385 + + + G +C T D + + + GD+L GAYG + + SR Sbjct: 281 LESPQNEEMADYCLAGSLCTTADVLVRKVTLPKLKIGDVLVFHNCGAYGVTEGIGLFLSR 340 Query: 386 LLIPEIMVNGSQFHIIR-PRMTF 407 L ++G++ ++R T+ Sbjct: 341 KLPSVYKLSGNKLELLRDQEETY 363 >gi|302384815|ref|YP_003820637.1| carboxynorspermidine decarboxylase [Clostridium saccharolyticum WM1] gi|302195443|gb|ADL03014.1| carboxynorspermidine decarboxylase [Clostridium saccharolyticum WM1] Length = 373 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 70/390 (17%), Positives = 117/390 (30%), Gaps = 25/390 (6%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TP Y +EKN + + A KA S A + G Sbjct: 3 IEDLKTPCYVIDEGRLEKNLDILKKVKESTGCRILLAQKAFSCFAEYPLIGRYLDGTTAS 62 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E R + E VF+ K D +L FN S+ E G Sbjct: 63 GLYEARLGRE-EMGLETHVFAPAYKEEDFKELTEICDHIVFNSFSQLEKY----HNSLGG 117 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 KA I + + G+P+ + LP + Sbjct: 118 VKAGIRINPQCSTQEGH-EIYDPCAPGSRLGVPLDHFKEEW-----LPWLSGFHFHTLCE 171 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D ++ A + ++ + +++GGG I + I Sbjct: 172 QNSDDLKKTLDAVE------EKFGKYLSGLSWLNMGGGHHITREDYDIGL----LETCIK 221 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ LEPG + + G LVT+V+ + + KT ++ A Sbjct: 222 RIKEKYGLQVYLEPGEAVALNAGYLVTEVMDVVDNGIKTLILDASAACHMPDVLEMPYRP 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + + C GD I +PGD LY Y V++ T Sbjct: 282 PLKDSGK--PGEKAFTYRLSSCTCLAGDVIGDYSFDRELKPGDKLYFMDMAIYSMVKNNT 339 Query: 382 YNSRLLIPE-IMVNGSQFHIIRPRMTFQEL 410 +N L IM H+I R +++ Sbjct: 340 FNGMPLPAIAIMDKEGDCHVI-KRFGYEDF 368 >gi|229057152|ref|ZP_04196542.1| Diaminopimelate decarboxylase [Bacillus cereus AH603] gi|228720158|gb|EEL71739.1| Diaminopimelate decarboxylase [Bacillus cereus AH603] Length = 199 Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 80/194 (41%), Gaps = 9/194 (4%) Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADV 283 ++ ++VGGG GI Y P + Y +I +EPGR +V D Sbjct: 1 MKVLNVGGGFGIRYTDSDTPLTLETYVHAVTSTIREQFTLCEYPLPEIWIEPGRSIVGDA 60 Query: 284 GILVTKVISIKKSADKTFV-ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVG 342 G + V ++K+ +D M D +RP LY A +E + N D I G Sbjct: 61 GTTLYTVGAVKEIPGIRKYVSVDGGMTDNLRPALYGARYE-AMLANRGNDENEELVSIAG 119 Query: 343 PICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIR 402 CE+GD + + + DLL I TGAYG + YN + G I+ Sbjct: 120 KCCESGDMLIWDINLPQVASSDLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVV 179 Query: 403 PRMTFQELIELDSI 416 R T++ +I D I Sbjct: 180 ERETYENIIGNDRI 193 >gi|299537795|ref|ZP_07051084.1| carboxynorspermidine decarboxylase [Lysinibacillus fusiformis ZC1] gi|298726774|gb|EFI67360.1| carboxynorspermidine decarboxylase [Lysinibacillus fusiformis ZC1] Length = 379 Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 118/386 (30%), Gaps = 20/386 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P Y + KN + D + ALK S + + +G+ S Sbjct: 8 KVPSPSYVVDERLLTKNLELLKSIQDRTGCRILLALKGFSMHSTFPLVGEYLAGITSSSL 67 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R + E V++ + +L S ++ + S GK Sbjct: 68 HEARLGYE-KMGKEVHVYAPAYIEHEMDELLGYVDH--IVFNSFNQWAQFKDKVKSAGKT 124 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 RVNP+ + + G + + Sbjct: 125 IECGIRVNPEYSEIETALYDPCYTNSRLGTTLANFDKSQLDGID-----------GLHFH 173 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 ++ +++ + ++ H ++ ++ GGG I ++I+ Sbjct: 174 AMCEQNSDTLERIIEVVEEKFGDVLHQMKWLNFGGGHHITRDD----YDVEKLVNIINYI 229 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + LEPG + + G LV V+ I+ ILD + M L Y + Sbjct: 230 QEKYNLLVYLEPGEAVALNTGYLVATVLDIQ-ENGMDLAILDTSATCHMPDVLEMPYRPM 288 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 A + H + G C GD I +PGD L Y V++ +N Sbjct: 289 IIGSGQANELAH-TYRLGGLTCLAGDVIGDYSFEQPLKPGDRLVFTDMAHYSMVKNHMFN 347 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 L + N + + F++ Sbjct: 348 GVNLPSIVSYNDEEGIKVIREFKFED 373 >gi|114045955|ref|YP_736505.1| ornithine decarboxylase [Shewanella sp. MR-7] gi|113887397|gb|ABI41448.1| ornithine decarboxylase [Shewanella sp. MR-7] Length = 391 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 85/378 (22%), Positives = 145/378 (38%), Gaps = 19/378 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +E+ A TPF T I K Y N+F D V YA+KAN ++ L + GS Sbjct: 20 RIEEFAKDKATPFVVIDTNIIAKQYDDMVNSFPYAD--VYYAVKANPAAEILTLLKNKGS 77 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI S EL V +R+ + K ++ + G+ + +SE++L+ + + Sbjct: 78 NFDIASIYELDMVTNVGVTPDRVSYGNTIKKRQDVRAFYERGVRMYASDSEADLRMIAEE 137 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + KFG + L A L ++ G+ Sbjct: 138 APGSRIYVRILTEGTDTAD---------WPLSRKFGCQNEMAYELLVLAKELG-LEPFGI 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAYHSDHRPPSSS- 254 H+GSQ I ++ A ++ + +LR + ++ I++GGG Y Sbjct: 188 SFHVGSQQRDIGAWDSAIGKVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYA 247 Query: 255 -DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + FG+ +IILEPGR L+++ G+LV++V+ I K + Sbjct: 248 EQITHFLKEDFGDDLPQIILEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFS 307 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IA-LPRPGDLLYIEK 370 + I + + I GP C++ D + + + GD +Y Sbjct: 308 GLIETMDEAIKFPIFTHKQGELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLT 367 Query: 371 TGAYGAVQSGT-YNSRLL 387 GAY S +N Sbjct: 368 AGAYTTTYSAVCFNGFPP 385 >gi|332850067|ref|ZP_08432454.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Acinetobacter baumannii 6013150] gi|332871508|ref|ZP_08440002.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Acinetobacter baumannii 6013113] gi|193078056|gb|ABO12988.2| putative ornithine decarboxylase [Acinetobacter baumannii ATCC 17978] gi|332730916|gb|EGJ62222.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Acinetobacter baumannii 6013150] gi|332731362|gb|EGJ62654.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Acinetobacter baumannii 6013113] Length = 386 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 91/377 (24%), Positives = 149/377 (39%), Gaps = 19/377 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L+ L TPF + IEK+YL F D + YALKAN VI+ L +GS Sbjct: 15 LDDLLKTKATPFLVLDLSVIEKHYLELKQGFPNAD--IYYALKANPANEVIERLCRIGSS 72 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D+ S EL++ A V A R+ F K +I + GI + +S+++L + Q A Sbjct: 73 FDLASVNELKKVQAFGVDASRLAFGNTIKKRADIQYFYEQGIRLYVTDSDADLNNIAQYA 132 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 ++ + + KFG + L A L + G+ Sbjct: 133 PGSKVFFRLSIDGSETAD---------WPLSGKFGCNAECVIRLAVKAKELGLI-PYGIS 182 Query: 198 MHIGSQIDQIESFHKA-FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS-- 254 H+GSQ +I+ + A + + + +++ +++GGGL Y +S Sbjct: 183 FHVGSQQRKIDLWDSALAETKAIFDVLVNDHQIHLKMLNLGGGLPAQYVQQTEAFASYSK 242 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + + +IILEPGR LV + GILV++++ I + Sbjct: 243 QINAALEMFKPYQLEQIILEPGRSLVGNAGILVSEIVLISQRPQSGTKRWVYTDVGVFNG 302 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKT 371 + I Y + + GP C++ D + N ++ L GD LY T Sbjct: 303 LIETLGEAIQYPIVCKKTGQSDDIILAGPTCDSMDIMYQNKKYELPLSLEIGDHLYWLST 362 Query: 372 GAYGAVQSG-TYNSRLL 387 GAY S +N Sbjct: 363 GAYTTSYSSIEFNGFPP 379 >gi|167031923|ref|YP_001667154.1| ornithine decarboxylase [Pseudomonas putida GB-1] gi|166858411|gb|ABY96818.1| Ornithine decarboxylase [Pseudomonas putida GB-1] Length = 387 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 91/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I + Y F+ V YA+KAN +I L GS DI Sbjct: 21 ADKQETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + + V A+RI + K +I + G+ + +S E N + G Sbjct: 79 SIYELDKVMDRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 SKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + + Sbjct: 249 FLKEDFGDELPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD LY TGAY Sbjct: 309 MDEAIKFPIWTEKKGEAEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|255714170|ref|XP_002553367.1| KLTH0D15114p [Lachancea thermotolerans] gi|238934747|emb|CAR22929.1| KLTH0D15114p [Lachancea thermotolerans] Length = 446 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 83/390 (21%), Positives = 143/390 (36%), Gaps = 35/390 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ +++ Y + YA+K+N ++ V++TL LG+ D S+ E+ Sbjct: 73 FFVCDLGEVKRLYEHWHAMLPR--VHPFYAVKSNPDRQVLETLVKLGANFDCASKSEIEM 130 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ K I A S + ++ EL + + IA Sbjct: 131 VLNLGVEPSRIIYANPCKASSFIRYAKNSDVRKSTFDNVEELAKIKKYHPESELLLRIA- 189 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + K+G + + SL A L + + GV HIGS Sbjct: 190 ---------TDDSTAQCRLSTKYGCEMEGVGSLLAKVKELG-LNLVGVSFHIGSGASDFG 239 Query: 209 SFHKAFKLLRDLTQ--QLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 SF+KA + R + + R N+ +D+GGG + ++ + A+L + Sbjct: 240 SFYKAVRDARQVFDLARERYGLQNVHILDIGGGFQLDSFAESSAVLN---AALEEFFPLG 296 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL-----DVAMNDF---------- 311 II EPGRF A L VI+ + +K ++ MN Sbjct: 297 SGTDIIAEPGRFFAASPFTLACHVIAKRAHDEKESMLYINDGVYGNMNCILFDHQKPTPR 356 Query: 312 -MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI-ALPRPGDLLYIE 369 + Y + + A + I GP C+ D I + GD LY Sbjct: 357 VLYHNQQFQYWDFESSSSTANAQCQHKVSIWGPTCDGLDCITSEYYLKHDLVVGDWLYFP 416 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 GAY + + +N + +++ S Sbjct: 417 VLGAYTSSAATQFNGFEQVADVIYIDSTSQ 446 >gi|331085412|ref|ZP_08334497.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407650|gb|EGG87148.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 378 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 111/385 (28%), Gaps = 23/385 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP++ + N + + A KA S +V L G E Sbjct: 11 TPYFVVDERRLLHNLEILKQVAEESGCKILLAQKAFSMFSVYPLLRKYLCGTTASGLYEA 70 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R E VFS + + +L FN ++ + + + Sbjct: 71 RLGKE-EFGGETHVFSPAYRAEEFDELLQYVDDLVFNSPAQVRKYGIRAKNAGKSIGLRV 129 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + H + G + ++ + I Sbjct: 130 NPECSTQ---EGHAIYDPCAPGSRLGTTLEAFEE-----------ELVPLLDGIHMHTLC 175 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ K + L + ++ +++GGG I R I + Sbjct: 176 EQNSDDLEKTVEALEDKFGKWLPQMKWLNLGGGHHITRADYDRERLVRI----IRRLREK 231 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 Q ++ LEPG +V + G LV V+ + + + + P + + + Sbjct: 232 YQLEVYLEPGEAVVLNAGDLVASVM--EIVHNNMEIAILDTSAACHMPDVLEMPYRPPVQ 289 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + GP C GD I G + E Y V++ T+N Sbjct: 290 KSGNPGEKQYTYRFAGPTCLAGDVIGDYSFEKPLTEGSRVVFEDMALYTMVKTNTFNGMA 349 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQEL 410 L + + + H++R +++ Sbjct: 350 LPSIVFRDQEGEEHLVRT-FGYEDF 373 >gi|84686404|ref|ZP_01014298.1| decarboxylase, pyridoxal-dependent [Maritimibacter alkaliphilus HTCC2654] gi|84665587|gb|EAQ12063.1| decarboxylase, pyridoxal-dependent [Rhodobacterales bacterium HTCC2654] Length = 385 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 75/372 (20%), Positives = 142/372 (38%), Gaps = 19/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P +E + + + + YA+KAN + +I+ L ++GS D S E+ Sbjct: 27 PTLVLDVDRVEYQFHQLAQGLGRAN--IHYAVKANPTREIIERLVNIGSHFDAASRAEIE 84 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ I F K + +I A +G+ F ++E EL+ + + A + Sbjct: 85 LCLSQGADPADISFGNTVKKVGDIAFAWHAGVTLFAADAEEELEKIAEHAPGAEVYIRMI 144 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + L AYA L +K G+ H+GSQ + Sbjct: 145 VENSQA----------DWPLSRKFGCRGEKAIDLMAYAVELG-LKPVGLSFHVGSQTKRA 193 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQYFGN 266 E + + ++ + + G+++ +++GGG Y P++ + Sbjct: 194 EMWTGVLDAVAEIWHRAVAEGYDLDLLNIGGGFPAFYGEAIDAPAAYAARVMDLVTARFG 253 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +++ EPGR LVA+ G ++ +V+ + K +D I Y Sbjct: 254 DVPRVMAEPGRGLVAECGAIIAEVLLVSKKSDDDMHRWVYLDIGRFSGLAETEGEAIRYQ 313 Query: 327 VNPAGD-RLHIHADIVGPICETGDFIALNR--KIAL-PRPGDLLYIEKTGAYGAVQSGT- 381 + D + GP C++ D + R + L + GD I GAY + S Sbjct: 314 IATPRDGGEMGPCILAGPSCDSADVLYEKRPIMLPLALKSGDRAIIRNAGAYTSSYSSVG 373 Query: 382 YNSRLLIPEIMV 393 +N + +++ Sbjct: 374 FNGFPPLDVVVL 385 >gi|104780253|ref|YP_606751.1| ornithine decarboxylase [Pseudomonas entomophila L48] gi|95109240|emb|CAK13937.1| putative ornithine decarboxylase [Pseudomonas entomophila L48] Length = 387 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 91/373 (24%), Positives = 144/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I + Y F+ V YA+KAN +I L GS DI Sbjct: 21 ADKQETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + + V A+RI + K +I + G+ + +S E N + G Sbjct: 79 SIYELDKVMGRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 SKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + + I GP C++ D + N K + L GD LY TGAY Sbjct: 309 MDEAIKFPIWTEKNGEAEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|127514320|ref|YP_001095517.1| ornithine decarboxylase [Shewanella loihica PV-4] gi|126639615|gb|ABO25258.1| ornithine decarboxylase [Shewanella loihica PV-4] Length = 391 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 87/399 (21%), Positives = 150/399 (37%), Gaps = 26/399 (6%) Query: 1 MSAFKYFE-----GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV 55 MS F+ + E ++ A TPF T I K Y + F + Sbjct: 1 MSQFQAIDVNEYYDQATFE--RIKAFAQDKPTPFVVIDTKIIAKQYDDMVHNFPY--ASI 56 Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 YA+KAN + V+ L G+ DI S EL V +R+ + K ++ Sbjct: 57 YYAVKANPAKEVLTLLRDRGANFDIASIYELDMVSDIGVTPDRVSYGNTIKKRKDVRAFY 116 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 + G+ + +SE++L+ + + A I + KFG Sbjct: 117 ERGVRMYASDSEADLRMIAEEAPGSRVYVRIL---------TEGTHTADWPLSRKFGCQN 167 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHI 234 L A TL ++ G+ H+GSQ I ++ A ++ + ++LR ++ I Sbjct: 168 EMAFELLVLAKTLG-LEPYGISFHVGSQQRDIGAWDSAIAKVKSIFERLREEHGIELKMI 226 Query: 235 DVGGGLGIAYHSDHRPPSSS--DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 ++GGG Y + + + FG+ +IILEPGR L+++ G+LV++V+ Sbjct: 227 NLGGGFPANYLDKTNELGTYAEQITHFLKEDFGDQLPQIILEPGRSLLSNAGVLVSEVVL 286 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 I K + + I + + I GP C++ D + Sbjct: 287 ISKKSQTALERWVFTDVGKFSGLIETMDEAIKFPIYTERQGELDRCVIAGPTCDSADIMY 346 Query: 353 LNRK--IAL-PRPGDLLYIEKTGAYGAVQSGT-YNSRLL 387 + + L GD +Y GAY S +N Sbjct: 347 EHYSYGLPLDLAIGDRMYWLTAGAYTTTYSAVCFNGFPP 385 >gi|149243762|ref|XP_001526522.1| ornithine decarboxylase [Lodderomyces elongisporus NRRL YB-4239] gi|146448916|gb|EDK43172.1| ornithine decarboxylase [Lodderomyces elongisporus NRRL YB-4239] Length = 436 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 80/368 (21%), Positives = 139/368 (37%), Gaps = 23/368 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + K+ + + YA+K N+N V++ LA G D S+ E+ Sbjct: 68 FFVCDLNQVYKSVQLWKQQLPRVQA--HYAVKCNTNMKVVEFLADKGVNFDCASKNEIDA 125 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V AERIV++ KT I A + + V++ +EL L++ G I Sbjct: 126 VLQLGVAAERIVYANPCKTNSFIRHARDNQVNLTTVDNVNELVKLSKFHPECGILVRII- 184 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + S + KFG + + G+ + GV H+GS + Sbjct: 185 ---------TDDESSQCRLSTKFGCSVETAVKEILPTAKNLGLPVVGVAFHVGSGAKDFQ 235 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQYFGNL 267 + ++A + R + G ++ +D+GGG + + + Sbjct: 236 AIYQAIRDSRIVFDYGIDLGFKMKILDIGGGFEFDTFVESSKMVNVSIDKFFPDLFVKEN 295 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSAD--KTFVILDVAMNDFMRPTLYDAYHEINY 325 I EPGRF+VA+ L T VI+ + K + ++ + + L+D Sbjct: 296 GISFIAEPGRFMVANAFTLATHVIAKRDINGSAKAMLYINDGVYGNLNCILFDHQEPTAR 355 Query: 326 IVNPAG-------DRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAV 377 I+ G D+ I GP C+ D ++ + + GD LY GAY + Sbjct: 356 ILKSGGQFHYGEKDQRRFEYSIWGPTCDGLDCVSASSHLNCNVAVGDWLYFPNLGAYTSC 415 Query: 378 QSGTYNSR 385 +N Sbjct: 416 AKTQFNGF 423 >gi|117922115|ref|YP_871307.1| ornithine decarboxylase [Shewanella sp. ANA-3] gi|117614447|gb|ABK49901.1| ornithine decarboxylase [Shewanella sp. ANA-3] Length = 391 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 85/378 (22%), Positives = 147/378 (38%), Gaps = 19/378 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +E+ A TPF T+ I K Y N+F D V YA+KAN ++ L + GS Sbjct: 20 RIEEFAKDKATPFVVIDTSIIAKQYDDMVNSFPYAD--VYYAVKANPAAEILTLLKNKGS 77 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI S EL V +R+ + K ++ + G+ + +SE++L+ + + Sbjct: 78 NFDIASIYELDMVTNVGVTPDRVSYGNTIKKRQDVRAFYERGVRMYASDSEADLRMIAEE 137 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + KFG + L A+ L ++ G+ Sbjct: 138 APGSRIYVRILTEGTDTAD---------WPLSRKFGCQNEMAYELLVLANELG-LEPFGI 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAYHSDHRPPSSS- 254 H+GSQ I ++ A ++ + +LR + ++ I++GGG Y Sbjct: 188 SFHVGSQQRDIGAWDSAIGKVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYA 247 Query: 255 -DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + FG+ +IILEPGR L+++ G+LV++V+ I K + Sbjct: 248 EQITHFLKEDFGDDLPQIILEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFS 307 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IA-LPRPGDLLYIEK 370 + I + + I GP C++ D + + + GD +Y Sbjct: 308 GLIETMDEAIKFPIFTHKQGELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLT 367 Query: 371 TGAYGAVQSGT-YNSRLL 387 GAY S +N Sbjct: 368 AGAYTTTYSAVCFNGFPP 385 >gi|103487413|ref|YP_616974.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256] gi|98977490|gb|ABF53641.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256] Length = 409 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 85/399 (21%), Positives = 152/399 (38%), Gaps = 18/399 (4%) Query: 8 EGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L E LA V TP + Y + + + A + YA+KAN Sbjct: 16 DGMLLIGGDRAESLADVAGDTPLFVYDSAMLAARAAEWRAAMPAA-VQLHYAMKANPYPP 74 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY-CFNVE 125 ++ +A L G D+ S GEL+ ALA+ + A I F+G GK E++ AL++G Sbjct: 75 LLAFMAGLVDGFDVASGGELKAALASGMDAAHISFAGPGKRDRELEAALEAGATLNLESA 134 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 E+E + + + + D+ + K K + + A Sbjct: 135 GEAERALAIAAHLGATPRLAVRVNPDFDLKGSGMKMGGGAKPFGVDAAAVPALVRRLIDA 194 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGGGLGIAY 244 G + GSQ + + L +L +++GGG+G+ Y Sbjct: 195 GA----DWRGFHIFAGSQALDAAAIAEMQAQTVALAARLADAIGTAPPLVNLGGGMGVPY 250 Query: 245 HSDHRPPSSSDYA-----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 ++ +L + + +E GR+LVA+ G+ +T+++ K S + Sbjct: 251 FPGDTAVDAAAVGEALGETLAARDAALADSRFAMELGRWLVAEAGVYLTRIVDRKVSHGE 310 Query: 300 TFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 TF++ D ++ + + N G +VG +C D + Sbjct: 311 TFLVTDGGLHHQLAASGNFGTVIRRNYPIAVANAFGREPVETVAVVGCLCTPLDRLGDQV 370 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 + GDL+ I + GAYGA S + + E++V Sbjct: 371 ALPRADVGDLIAIFQAGAYGASASPAAFLGQGPARELLV 409 >gi|120600420|ref|YP_964994.1| diaminopimelate decarboxylase [Shewanella sp. W3-18-1] gi|146291648|ref|YP_001182072.1| diaminopimelate decarboxylase [Shewanella putrefaciens CN-32] gi|120560513|gb|ABM26440.1| ornithine decarboxylase [Shewanella sp. W3-18-1] gi|145563338|gb|ABP74273.1| ornithine decarboxylase [Shewanella putrefaciens CN-32] gi|319424877|gb|ADV52951.1| Orn/DAP/Arg decarboxylase 2 [Shewanella putrefaciens 200] Length = 391 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 89/394 (22%), Positives = 149/394 (37%), Gaps = 30/394 (7%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M FK +E A TPF T+ I K Y N+F + V YA+K Sbjct: 15 MDTFK-----------RIEAFAKDKATPFVVIDTSIIAKQYDDMVNSFPYAN--VYYAVK 61 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN ++ L GS DI S EL + V A+R+ + K ++ + G+ Sbjct: 62 ANPAAEILSLLKDKGSNFDIASIYELDMVMNVGVTADRVSYGNTIKKRQDVRAFYERGVR 121 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 + +SE++L+ + + A I + KFG + Sbjct: 122 MYASDSEADLRMIAEEAPGSRIYVRILTEGTDTAD---------WPLSRKFGCQNEMAYE 172 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGG 239 L A L ++ G+ H+GSQ I ++ A ++ + +LR + ++ I++GGG Sbjct: 173 LLVLAQELG-LEPYGISFHVGSQQRDIGAWDSAIGKVKSIFDRLRDEHNITLKMINMGGG 231 Query: 240 LGIAYHSDHRPPSSS--DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 Y + + FG+ +IILEPGR L+++ GILV++V+ I K + Sbjct: 232 FPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQIILEPGRSLISNAGILVSEVVLISKKS 291 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK- 356 + I + + I GP C++ D + + Sbjct: 292 YTALERWVFTDVGKFSGLIETMDEAIKFPIYTEKKGELDKCVIAGPTCDSADIMYEHYSY 351 Query: 357 -IA-LPRPGDLLYIEKTGAYGAVQSGT-YNSRLL 387 + GD +Y GAY S +N Sbjct: 352 GLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFPP 385 >gi|218886627|ref|YP_002435948.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757581|gb|ACL08480.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 405 Score = 136 bits (342), Expect = 8e-30, Method: Composition-based stats. Identities = 54/371 (14%), Positives = 110/371 (29%), Gaps = 14/371 (3%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL----GSGLD 79 +P + IE N V ALK + ++ L+ G Sbjct: 14 RFPSPCFVVDEARIEANAAILDTVQRRTGARVLLALKGFAMWSLFPLLSRAHGGVLHGTC 73 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S E R E F+ D +L + FN ++ A Sbjct: 74 ASSPHEARLGRE-EFGGEVHAFAAGYSDADMAELVTLADHLVFNSFAQWSRFRPAVAAAG 132 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + I + + + G+ H + A A+ + G+ Sbjct: 133 RPIECGIRINPEH--SEGAVAIYNPCSPGSRLGVRPHHFEAALAEAAARGEDALDGISGL 190 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 + + ++ + L + + ++ ++ ++ GGG + Sbjct: 191 HFHTLCEQDADA-LDRTLHAVEARFGAHLSRMKWLNFGGGHHVTRPGYDLDL----LCRC 245 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 I + ++ +EPG + + G+L+ V+ + ++ + + P + + Sbjct: 246 IDRMQQKYGVQVYIEPGEAVALNAGVLLCTVLDVVQAD--MPIAILDTSAAAHMPDVLEM 303 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + I + G C GD I A +PGD L Y V++ Sbjct: 304 PYRPGCIGSGLPGERAWTCRFAGKSCLAGDVIGEYSFDAPLQPGDRLAFLDMAIYSMVKT 363 Query: 380 GTYNSRLLIPE 390 T+N L Sbjct: 364 TTFNGLQLPAI 374 >gi|163744805|ref|ZP_02152165.1| decarboxylase, pyridoxal-dependent [Oceanibulbus indolifex HEL-45] gi|161381623|gb|EDQ06032.1| decarboxylase, pyridoxal-dependent [Oceanibulbus indolifex HEL-45] Length = 392 Score = 136 bits (342), Expect = 8e-30, Method: Composition-based stats. Identities = 88/372 (23%), Positives = 147/372 (39%), Gaps = 19/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P S + Y + D + YA+KAN +I+ L GSG D S E+ Sbjct: 34 PTLVISRERVAAQYDALHSGLG--DAHIHYAVKANPAAEIIRLLVKKGSGFDAASRAEIE 91 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ E I F K +I A +G+ F +SE+EL + A + Sbjct: 92 LCLSQGAKPENISFGNTIKRASDIAFAHSAGVTLFAADSEAELDKIAAHAPGARVYLRLI 151 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 ++ KFG + +L +A + V G+ H+GSQ + Sbjct: 152 VE----------NSMADWPLSRKFGCAGSALPALLNHAVAVGLV-PFGLSFHVGSQTRKA 200 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH-QYFGN 266 E ++ + L R++GH++Q +++GGG Y P + A + + Sbjct: 201 EFWNPVLDQVAPLWHAARADGHDLQLLNLGGGFPAFYGESIEAPRAYAAAVISAVKARFG 260 Query: 267 LQCKIILEPGRFLVADVGILVTKVI-SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 +++ EPGR LVA+ G + +VI +KSAD + + + F + Sbjct: 261 DVPQLMAEPGRGLVAEAGHIAAEVILVSRKSADDLHRWVYLDIGRFSGLAETEGEAIRYQ 320 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYGAVQSGT- 381 IV P + GP C++ D + R + L R GD + I GAY + S Sbjct: 321 IVTPHDGEETGPCVLAGPSCDSADILYEKRPVHLPLALRDGDKVMIRACGAYTSSYSSVG 380 Query: 382 YNSRLLIPEIMV 393 +N + I++ Sbjct: 381 FNGFPPLDVIVL 392 >gi|26987600|ref|NP_743025.1| ornithine decarboxylase [Pseudomonas putida KT2440] gi|24982277|gb|AAN66489.1|AE016277_8 ornithine decarboxylase, putative [Pseudomonas putida KT2440] Length = 371 Score = 136 bits (342), Expect = 8e-30, Method: Composition-based stats. Identities = 91/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I + Y F+ V YA+KAN +I L GS DI Sbjct: 5 ADKQETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIA 62 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + + V A+RI + K +I + G+ + +S E N + G Sbjct: 63 SIYELDKVMGRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDS--EADLRNIAKAAPG 120 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 121 SKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 172 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 173 SQQRDISVWDAAIAKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIR 232 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + + Sbjct: 233 FLKEDFGDELPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIET 292 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD LY TGAY Sbjct: 293 MDEAIKFPIWTEKKGEAEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYT 352 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 353 TSYSAVEFNGFPP 365 >gi|148546138|ref|YP_001266240.1| ornithine decarboxylase [Pseudomonas putida F1] gi|148510196|gb|ABQ77056.1| ornithine decarboxylase [Pseudomonas putida F1] gi|313497233|gb|ADR58599.1| Ornithine decarboxylase [Pseudomonas putida BIRD-1] Length = 387 Score = 136 bits (342), Expect = 8e-30, Method: Composition-based stats. Identities = 91/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I + Y F+ V YA+KAN +I L GS DI Sbjct: 21 ADKQETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + + V A+RI + K +I + G+ + +S E N + G Sbjct: 79 SIYELDKVMGRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 SKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + + Sbjct: 249 FLKEDFGDELPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD LY TGAY Sbjct: 309 MDEAIKFPIWTEKKGEAEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|325278873|ref|YP_004251415.1| Diaminopimelate decarboxylase [Odoribacter splanchnicus DSM 20712] gi|324310682|gb|ADY31235.1| Diaminopimelate decarboxylase [Odoribacter splanchnicus DSM 20712] Length = 412 Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 79/410 (19%), Positives = 137/410 (33%), Gaps = 13/410 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIK 69 E +L + TP Y + N AF + + +V Y+ K N + K Sbjct: 3 TFEQCKKLEL--EIGTPAYLVNEDLFLNNLRDIRAAFKSLYQNIVVGYSFKTNYLPYLCK 60 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 G ++VS E + AL +I+F+G K E AL +G Sbjct: 61 LALEQGCYAEVVSFLEYQIALKVGFTGNQIIFNGPIKRESEFVTALLNGSVINIDSDYEI 120 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDI-NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 + + + I RVN I + N I ++ +FG +I + + Sbjct: 121 DYLERLKEIYPENQFEIGLRVNVSIKDENGCSAIYGEEESGRFGFMEDEIDKAIERLTKI 180 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 KI + H S+ I ++ + L ++ + + I G + Sbjct: 181 -NCKIISLHGHTSSKNRAINNYVQIIDKLFEIQHHYKLDIKYINIGGGFFGPVPPGMFGY 239 Query: 249 RPPSSSDYAS------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 PS DYA +++F + +++EPG + A +TKV +KK +++ Sbjct: 240 ATPSYKDYAEVIIAKLHTNRWFCENRPCLVIEPGMSVAASSMAYITKVFDVKKRSNRWIA 299 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +D M + D G C D + Sbjct: 300 QVDGNMFHIRPSMHTMKIPFQIISGRVIDNVETKRIDFAGSTCMESDVLVRTETCRQVHQ 359 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 GD L I+ G Y V + L ++ ++F +R F IE Sbjct: 360 GDFLEIDNVGGYTFVMGANFIQF-LPHIAILKNNEFISLREGSNFDNFIE 408 >gi|113971837|ref|YP_735630.1| ornithine decarboxylase [Shewanella sp. MR-4] gi|113886521|gb|ABI40573.1| ornithine decarboxylase [Shewanella sp. MR-4] Length = 391 Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 85/378 (22%), Positives = 146/378 (38%), Gaps = 19/378 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +E+ A TPF T+ I K Y N+F D V YA+KAN ++ L + GS Sbjct: 20 RIEEFAKDKATPFVVIDTSIIAKQYDDMVNSFPYAD--VYYAVKANPAAEILTLLKNKGS 77 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI S EL V +R+ + K ++ + G+ + +SE++L+ + + Sbjct: 78 NFDIASIYELDMVTNVGVTPDRVSYGNTIKKRQDVRAFYERGVRMYASDSEADLRMIAEE 137 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + KFG + L A L ++ G+ Sbjct: 138 APGSRIYVRILTEGTDTAD---------WPLSRKFGCQNEMAYELLVLAKELG-LEPFGI 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAYHSDHRPPSSS- 254 H+GSQ I ++ A ++ + +LR + ++ I++GGG Y Sbjct: 188 SFHVGSQQRDIGAWDSAIGKVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYA 247 Query: 255 -DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + FG+ +IILEPGR L+++ G+LV++V+ I K + Sbjct: 248 EQITHFLKEDFGDDLPQIILEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFS 307 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IA-LPRPGDLLYIEK 370 + I + + I GP C++ D + + + GD +Y Sbjct: 308 GLIETMDEAIKFPIFTHKQGELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLT 367 Query: 371 TGAYGAVQSGT-YNSRLL 387 GAY S +N Sbjct: 368 AGAYTTTYSAVCFNGFPP 385 >gi|164663157|ref|XP_001732700.1| hypothetical protein MGL_0475 [Malassezia globosa CBS 7966] gi|159106603|gb|EDP45486.1| hypothetical protein MGL_0475 [Malassezia globosa CBS 7966] Length = 493 Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 81/404 (20%), Positives = 132/404 (32%), Gaps = 57/404 (14%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I + Y+ + + + YA+K N V+ LA LG G D S GE++ Sbjct: 66 FYVADLATIYRQYVRWRRELPRI--IPFYAVKCNPEPIVLHLLAALGLGFDCASNGEIQT 123 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ K + A I ++ EL + + I Sbjct: 124 ILDMGVSPSRIIYANPCKASSFVRRAAAQNICLTTFDNVDELYKMKRFHPESKLVVRIL- 182 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG P+ + L + A L + + GV H+GS E Sbjct: 183 ---------TDDSKSVCQLGIKFGAPLADVPRLLSKARELD-LDVVGVSFHVGSGCFDPE 232 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS----------DHRPPSSSDYAS 258 ++ A R R G+ +D+GGG D P + Sbjct: 233 AYRDALYRSRQAFDMGREYGYTFDLLDIGGGFEHHNFEAIAKVVRSALDDYFPDEAFAPG 292 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT------------------ 300 ++I EPGR+ V L T +I+ ++S + Sbjct: 293 GSRMTERPKGLRVIAEPGRYFVYRAFSLATNIIARRQSEEDNSDAVRQDGQGGADDGRPK 352 Query: 301 -FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI--------------HADIVGPIC 345 + L+D +++ D ++ + GP C Sbjct: 353 AMYYQNDGTYGAFNCILFDHQQVHPKVLSMQRDFVYERESSVPELAQDQWRPCSVWGPTC 412 Query: 346 ETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 ++ D I ++ GD L E GAY S T+N Sbjct: 413 DSMDCIMRQTRLPRALDVGDWLVYENMGAYTLCASSTFNGLARA 456 >gi|119773550|ref|YP_926290.1| ornithine decarboxylase [Shewanella amazonensis SB2B] gi|119766050|gb|ABL98620.1| ornithine decarboxylase [Shewanella amazonensis SB2B] Length = 391 Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 92/400 (23%), Positives = 156/400 (39%), Gaps = 28/400 (7%) Query: 1 MSAFK------YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM 54 MS F+ +++ A +++ A TPF T I K Y F + Sbjct: 1 MSQFQSIDVADFYDSETFA---RIQEFAKDKATPFVVIDTNIIAKQYDDMVTNFPFAN-- 55 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 V YA+KAN + ++ L GS DI S EL +A V A+R+ F K ++ Sbjct: 56 VYYAVKANPAKEILTLLKDKGSNFDIASIYELDMVMAVGVTADRVSFGNTIKKRKDVRAF 115 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 + G+ F +SE++L+ + + A I + + KFG Sbjct: 116 YERGVRLFASDSEADLRMIAEEAPGSKVYVRILTEGSQTAD---------WPLSRKFGCQ 166 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQH 233 + L A A L + G+ H+GSQ I ++ A ++ L +LR + ++ Sbjct: 167 NEMAYELLALAKELG-LDPYGISFHVGSQQRDIGAWDAAIGKVKVLFDRLREDHGIVLKM 225 Query: 234 IDVGGGLGIAYHSDHRPP--SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 I++GGG Y + + + FG+ +IILEPGR L+++ G+L+++V+ Sbjct: 226 INMGGGFPANYIDKTNQLGVYAQQIKHFLKEDFGDELPEIILEPGRSLISNAGVLISEVV 285 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 I + + + I Y + I GP C++ D + Sbjct: 286 LISRKSHTALERWVYTDVGKFSGLIETMDEAIKYPIFTEKKGELDKCVIAGPTCDSADIM 345 Query: 352 ALNRK--IA-LPRPGDLLYIEKTGAYGAVQSGT-YNSRLL 387 + + GD LY GAY S +N Sbjct: 346 YEHYAYGLPADLAIGDRLYWLTAGAYTTTYSAVCFNGFPP 385 >gi|85099297|ref|XP_960749.1| ornithine decarboxylase [Neurospora crassa OR74A] gi|118381|sp|P27121|DCOR_NEUCR RecName: Full=Ornithine decarboxylase; Short=ODC gi|168854|gb|AAA33604.1| ornithine decarboxylase [Neurospora crassa] gi|168856|gb|AAA33605.1| ornithine decarboxylase [Neurospora crassa] gi|293958|gb|AAA33614.1| ornithine decarboxylase [Neurospora crassa] gi|28922270|gb|EAA31513.1| ornithine decarboxylase [Neurospora crassa OR74A] gi|38566814|emb|CAE76122.1| ornithine decarboxylase [Neurospora crassa] Length = 484 Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 80/394 (20%), Positives = 140/394 (35%), Gaps = 52/394 (13%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L + + YA+K + ++ +++ LA LG+G D S+ E+ + Sbjct: 85 FFVADLGEVYRQHLRWKLNLPRVKP--FYAVKCHPDERLLQLLAALGTGFDCASKAEIEQ 142 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ KT + Q G+ ++ EL+ + + I Sbjct: 143 VLRMGVDPSRIIYAQPCKTNSYLRYVAQQGVRQMTFDNADELRKIARLYPDAELFLRIL- 201 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L + + GV H+GS Sbjct: 202 ---------TDDSSSLCRFSMKFGASLDSTDGLLGLARQLG-LNVVGVSFHVGSGASDPT 251 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + + QQ + G++++ +DVGGG ++ A+L + + Sbjct: 252 AFLKAVQDAHVVFQQAAAYGYSLKTLDVGGGF--CSDDSFEQMANVLRAALDEYFPAHTG 309 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSAD---------KTFVILDVAMNDFMRPTLYDA 319 +I EPGR+ + L +I+ + D + N R +Y Sbjct: 310 VNLIAEPGRYYASSAFTLACNIIARRTIQDGSAVSVSDSSSMSDDGSVNNGDARYMVYVN 369 Query: 320 YHEINYIVNPAGDRLH---------------------------IHADIVGPICETGDFIA 352 + D H I I GP C+ D I Sbjct: 370 DGLYGNFSSIMFDHQHPVAKILRAGGRTMYNSVAAHESSAEDAIEYSIWGPTCDGIDRIT 429 Query: 353 LNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + GD LY E GAY + T+N Sbjct: 430 ESIRFREILDVGDWLYFEDMGAYTKCSATTFNGF 463 >gi|91794425|ref|YP_564076.1| diaminopimelate decarboxylase [Shewanella denitrificans OS217] gi|91716427|gb|ABE56353.1| ornithine decarboxylase [Shewanella denitrificans OS217] Length = 391 Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 85/377 (22%), Positives = 148/377 (39%), Gaps = 19/377 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 +++ A TPF T I K Y F + V YA+KAN + V+ L GS Sbjct: 21 IKEFAKDKPTPFVVIDTKIIAKQYDDMVKNFPYAN--VYYAVKANPAKEVLTLLRDKGSN 78 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 DI S EL + V A+RI + K ++ + G+ F +SE++L+ + + A Sbjct: 79 FDIASIYELEMVTSIGVSADRISYGNTIKKRVDVRSFYEQGVRMFASDSEADLRMIAEEA 138 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 I + KFG + L A L V G+ Sbjct: 139 PGSKIYVRIL---------TEGTHTADWPLSRKFGCQNEMAYDLLVLARELGLV-PHGIS 188 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS-- 254 H+GSQ I ++ A ++ + +L+ ++ I++GGG Y ++ Sbjct: 189 FHVGSQQRDIGAWDSAIGKVKGIYDRLKEEHGIQLKMINLGGGFPANYIDKTNELATYAE 248 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + FG+ ++ILEPGR L+++ G+LV++V+ I + ++ Sbjct: 249 QITHFLKEDFGDDLPEVILEPGRSLLSNAGVLVSEVVLISRKSNTALERWVFTDVGKFSG 308 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR---PGDLLYIEKT 371 + I + + I GP C++ D + + LP+ GD ++ Sbjct: 309 LIETTDEAIKFPIYTDRTGELDKCVIAGPTCDSADIMYEHYSYGLPKDLAIGDRMFWLTA 368 Query: 372 GAYGAVQSGT-YNSRLL 387 GAY S +N Sbjct: 369 GAYTTTYSAVCFNGFPP 385 >gi|167753612|ref|ZP_02425739.1| hypothetical protein ALIPUT_01891 [Alistipes putredinis DSM 17216] gi|167658237|gb|EDS02367.1| hypothetical protein ALIPUT_01891 [Alistipes putredinis DSM 17216] Length = 376 Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 62/388 (15%), Positives = 114/388 (29%), Gaps = 21/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P + +++N V ALKA + ++ LA G S Sbjct: 5 QKLPSPCFVLDEQLLDRNLAVIDRVRRESGAEVIVALKACAMWSIFPELAQHSDGATASS 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R ++ V + ++ S FN ++ E ++L + Sbjct: 65 LAEARLVFEEFGRPAHT-YAPVYTDRNIEEILDCSDHITFNSVAQFERF----GQMALLR 119 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 R+NP + + + GIP ++ L A L + Sbjct: 120 GISCGLRINPGYSPVETDLYNPCVPGSRLGIPAGELKELPAGVEGLHFHVLCESR----- 174 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 L + ++ I+ +++GGG + + Sbjct: 175 -------PEHLRLALDAVEKRFGRFLDRIKWLNMGGGHLMTHKDYDCDELIRIL---QEF 224 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ILEPG G LV+ V I ++ +LDV+ M L Y Sbjct: 225 KAKYPNLRLILEPGSAFTWRTGYLVSTVEDIVENGGVRTAMLDVSFACHMPDCLEMPYKP 284 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + G C GD+ R GD + E Y V++ + Sbjct: 285 AILGARDPEPGEKG-WRMGGNSCLAGDYYGDWIFDRDLRVGDRIVFEDMIHYTMVKTTMF 343 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 N +V I +++ Sbjct: 344 NGVAHPAIAIVRRDGAIEIIREFGYEDF 371 >gi|16506287|ref|NP_443724.1| arginine decarboxylase [Homo sapiens] gi|24636807|sp|Q96A70|ADC_HUMAN RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC; AltName: Full=ODC-paralogue; Short=ODC-p; AltName: Full=Ornithine decarboxylase-like protein gi|14714623|gb|AAH10449.1| ADC protein [Homo sapiens] gi|15858863|gb|AAL08049.1| ornithine decarboxylase-like protein variant 1 [Homo sapiens] gi|24081047|gb|AAH28128.1| Arginine decarboxylase [Homo sapiens] gi|56202451|emb|CAI19354.1| arginine decarboxylase [Homo sapiens] gi|119627877|gb|EAX07472.1| arginine decarboxylase, isoform CRA_d [Homo sapiens] gi|119627886|gb|EAX07481.1| arginine decarboxylase, isoform CRA_d [Homo sapiens] gi|123982478|gb|ABM82980.1| arginine decarboxylase [synthetic construct] gi|123997145|gb|ABM86174.1| arginine decarboxylase [synthetic construct] gi|189055058|dbj|BAG38042.1| unnamed protein product [Homo sapiens] Length = 460 Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 74/371 (19%), Positives = 130/371 (35%), Gaps = 30/371 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 +PA +I+ + K I +I A + GI + ++E EL + + S IA Sbjct: 99 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG+ + L A V++ GV HIGS + Sbjct: 158 ---------TDDSHSLSCLSLKFGVSLKSCRHLLENAKKH-HVEVVGVSFHIGSGCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 I E GR+ V + +I+ K S + + + F Sbjct: 268 CGVDIFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIF 327 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P+ ++ + + GP + D +A + GD L + Sbjct: 328 NSVLFDNICPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNM 387 Query: 372 GAYGAVQSGTY 382 GAY + Sbjct: 388 GAYTVGMGSPF 398 >gi|237735244|ref|ZP_04565725.1| carboxynorspermidine decarboxylase [Mollicutes bacterium D7] gi|229380989|gb|EEO31080.1| carboxynorspermidine decarboxylase [Coprobacillus sp. D7] Length = 369 Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 121/377 (32%), Gaps = 21/377 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y +EKN + + A K S +V +A G E Sbjct: 3 TPYYLIDEQLLEKNLKILHTVKERTGCKILLAQKCFSMFSVYPLIAEYLDGTTASGLYEA 62 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + + E VFS + + ++ FN ++ + + S I Sbjct: 63 KLGYE-EMHKENHVFSTAYRDDEIEEIMNICDHVVFNSFNQWQKYQNLAKQTSTSCGIRI 121 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + I + + + + L G++ D Sbjct: 122 NPECSTQIGHEIYDPCAKFSRMGVTLENFKEEL--------LEGIEGLHFHTLCEQNSDD 173 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + + +A + ++ ++ ++ GGG +H + +I++ Sbjct: 174 LITTIRAVE------EKFGKYLGQMKWLNFGGG----HHITRKDYDLEKLIKIINEIKEK 223 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 Q ++ LEPG + + G LV+ V+ I + ++ A + + + I Sbjct: 224 YQVQVYLEPGEAVALNAGFLVSSVLDITHNGMAIAIMDTSAACHMP--DVLEMPYRPEII 281 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + + + GP C GD I + G L+ + Y V++ T+N Sbjct: 282 DSALPNVKTYTYRLGGPTCLAGDIIGDYSFDQPLQVGQQLWFKDMAIYSMVKNNTFNGMN 341 Query: 387 LIPEIMVNGSQFHIIRP 403 L ++ + II+ Sbjct: 342 LPSIVLKQKEKLKIIKE 358 >gi|29833865|ref|NP_828499.1| diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] gi|29610990|dbj|BAC75034.1| putative diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] Length = 408 Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 81/376 (21%), Positives = 132/376 (35%), Gaps = 17/376 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y + + A + YA KAN ++ LA G ++ S GEL Sbjct: 21 PAYVYDLAELRAHAAGVRAALPE-RVELYYAAKANPEPEILAALAPYVDGYEVASGGELA 79 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A P + F G GKT DE+ AL G+ F+VESE EL L ++A + +A Sbjct: 80 HVAQAV-PGRPLAFGGPGKTPDEVAAALAGGVQRFHVESEYELHMLAEQARRVTPGTRVA 138 Query: 148 FRVNPDIN------ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 ++ A + + T P +++ GV H+ Sbjct: 139 VLPRFNLPVRDGSLAGSALAMGGRPTPFGLDPAQAGTVLRLLTDGTYPHLELRGVHAHLA 198 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 S ++ E A ++ T +G + ++VGGG+ + Y + R Y + Sbjct: 199 SGLEAPEQLAVAETVVGWATDMAGEHGVGLGEVNVGGGMTVDYAAPERRFDWVTYGKGLA 258 Query: 262 QYFGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + + +EPGR L A G T+V+ +K+S + F ++ + P Sbjct: 259 RLAHAHPELTLRIEPGRALTAYCGWYATEVLDVKRSHGEEFAVVRGGTHHLRTPATKGHD 318 Query: 321 HEI-------NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P + G +C D +A R GD + GA Sbjct: 319 QPCSVLPVDGWPHPWPRPAAEAERVTLTGQLCTPKDVLARQVPAGGLRAGDRVAFALAGA 378 Query: 374 YGAVQSGT-YNSRLLI 388 Y S + Sbjct: 379 YAWNISHHDFLMHPRP 394 >gi|260588051|ref|ZP_05853964.1| carboxynorspermidine decarboxylase [Blautia hansenii DSM 20583] gi|260541578|gb|EEX22147.1| carboxynorspermidine decarboxylase [Blautia hansenii DSM 20583] Length = 378 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 121/389 (31%), Gaps = 23/389 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP++ + N + + + A KA S + +G Sbjct: 7 NEFSTPYFLVDEKRLLHNLEILKSVSEKSGCKILLAQKAFSMFYAYPLMREYLAGTTASG 66 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + E VFS + + ++ + FN ++ + +A Sbjct: 67 LYEAKLGCE-EFGKETHVFSPAYREKEFDEILKYADDVVFNSPTQFKKFAKKAKAAGKSV 125 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + H + G + ++ + Sbjct: 126 GLRINPQCSTQ---EGHAIYDPCADFSRLGTTLENFEE-----------ELLSELDGLHF 171 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + L+ + ++ + ++ +++GGG I ++ Sbjct: 172 HTLCEQGADALEITLKAVEEKFGKYLYQMKWLNLGGGHHITKAD----YDVDALIRMVRH 227 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ LEPG +V D G LV++V+ ILD + M L Y Sbjct: 228 LKETYDVEVYLEPGEAVVLDAGFLVSQVL-EVVHNGMDIAILDTSAACHMPDVLEMPYRP 286 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 AG++ + GP C GD + A + GDL+ E Y V++ T+ Sbjct: 287 PVKDSGLAGEKA-CTVRLAGPTCLAGDVMGDYSFDAPLKEGDLVVFEDMALYTMVKTNTF 345 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 N L + + + +++ +++ Sbjct: 346 NGMPLPDIVWRDRNGEMKLVKS-FGYEDF 373 >gi|258655147|ref|YP_003204303.1| Orn/DAP/Arg decarboxylase 2 [Nakamurella multipartita DSM 44233] gi|258558372|gb|ACV81314.1| Orn/DAP/Arg decarboxylase 2 [Nakamurella multipartita DSM 44233] Length = 403 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 86/367 (23%), Positives = 147/367 (40%), Gaps = 22/367 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP ++ Y + G+D + YA+KAN + V++TLA LG+ D+ S GE+ Sbjct: 24 TPVLRVDCAVVQARYRRLAAVLPGVD--LHYAVKANPSPPVLRTLAGLGARWDVASPGEI 81 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 LA + + K +I A + G+ + V+S +EL ++ A Sbjct: 82 EAVLAVDPDPRHLSYGNPIKKSSDIAAAARRGVRRYTVDSPAELAKVSAHAP-------- 133 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + +T + KFG P + +L A+ G+ H+G+Q Sbjct: 134 --GAQILVRLSTSGAGADWPLGGKFGCPEREARTLLRTAAAAGHE--VGISFHVGTQQRD 189 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYF 264 ++ L + LR G + +++GGG + + A + F Sbjct: 190 PGAWDGPLAAAGRLDRGLRGAGARLSTVNLGGGFPAGMLGRTQSAARYGQAIRDAVRRAF 249 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 G ++ EPGRFLVAD G LV++V+ + + +V LD + + ++ Sbjct: 250 GAQPPALMAEPGRFLVADAGTLVSEVVLVSDRGGERWVYLDAGLFTGLVEAYGESLRYRL 309 Query: 325 YIVNPAGD--RLHIHADIVGPICETGDFIA---LNRKIALPRPGDLLYIEKTGAYGAVQS 379 + G A + GP C++ D + R A RPGD ++ GAY A S Sbjct: 310 AVERTGGPFASATTEAILAGPTCDSLDVLYRRHRYRLPADLRPGDRVHFLSAGAYTASYS 369 Query: 380 GT-YNSR 385 +N Sbjct: 370 TVGFNGF 376 >gi|152991040|ref|YP_001356762.1| carboxynorspermidine decarboxylase [Nitratiruptor sp. SB155-2] gi|151422901|dbj|BAF70405.1| carboxynorspermidine decarboxylase [Nitratiruptor sp. SB155-2] Length = 382 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 110/387 (28%), Gaps = 23/387 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 ++K+ + TP Y + +N + ALK + + L G Sbjct: 7 IQKVLDQIPTPCYVCEEGLLRRNLEILDEVQQKSGAKIILALKGFAMWSTFDILKQYLHG 66 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 E + A + V + ++ + S + Sbjct: 67 ATASGLWEAKL---AFEELGKEVHTYSPAFKEDEIELIAKMSDHIVFNSMHQFNAFKDIV 123 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 I RVNP+ +A + + G+ + A Sbjct: 124 KKTDPDISIGVRVNPEYSAAPVDLYNPCGAFSRLGVVRSEFSWDDAI------------- 170 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + ES +L+ ++ + I+ GGG I +R Sbjct: 171 KGLHFHALCEESAESLEGVLKAFEERFGEFVPKCKWINFGGGHHITKEGYNREL----LI 226 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 LI + ++ LEPG + G+LV V+ I + ++ A + Sbjct: 227 KLIRDFKKRYDVEVYLEPGEAVGWQTGVLVATVVDIVHNGMDIAILDTSAETHMP--DVL 284 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + + + G C GD I + G L E Y V Sbjct: 285 AMPYRPDVRGAAKPGEKPYTYRLGGNSCLAGDIIGDYSFDEPLQRGQKLVFEDMIHYTFV 344 Query: 378 QSGTYNSRLLIP-EIMVNGSQFHIIRP 403 ++ T+N L ++ +F I++ Sbjct: 345 KNTTFNGIRLPSLALLKEDGKFEIVKK 371 >gi|257064415|ref|YP_003144087.1| diaminopimelate decarboxylase [Slackia heliotrinireducens DSM 20476] gi|256792068|gb|ACV22738.1| diaminopimelate decarboxylase [Slackia heliotrinireducens DSM 20476] Length = 395 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 84/399 (21%), Positives = 155/399 (38%), Gaps = 27/399 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +A TP Y + A A G + +C+A+KAN +I A + S Sbjct: 6 LRAIAQDYGTPSYVFDLEAFRNRLRECQ-AIVGPEVHLCFAMKANP--WLINAAAQVASK 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 L++ S GEL A + ++IV+SGV K I +I A++ G E + Sbjct: 63 LEVCSPGELDLCERANINPDQIVYSGVNKEICDITHAIEYGAGVLTA----ESLLHVEYI 118 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + ++ + V P +NA + +FG+ ++ L PG+K+ G+ Sbjct: 119 DQVAREHNLVVDVLPRLNAGS-----------QFGMSKDELLWLVDNRDRFPGLKLVGIH 167 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI---QHIDVGGGLGIAYHSDHRPPSSS 254 + +Q +++ K +L DL +L + + G G+ D Sbjct: 168 YFVYTQRLKLKHQRKEMAMLSDLIDELANEHDFVVERLEYGPGLGVPYFMDDDFSDDLLP 227 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + ++ +E GRF + G TK + +K + + ILD M+ Sbjct: 228 IREIADDLRALAAKTELTIEMGRFFASPCGTYFTKAMDLKSNKGTNYAILDGGMHHITYF 287 Query: 315 TLYDAYH--EINYIVNPAGDRLHIHAD--IVGPICETGDFIALNRKIALPRPGDLLYIEK 370 H I + A DR A+ + G +C D + ++ + GD+L + Sbjct: 288 GQMMGMHVPPIVNLTREAEDRESEVAEWCLCGSLCTVNDVLVRAVELDSLQRGDVLAFGR 347 Query: 371 TGAYGAVQS-GTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 GAY + + SR +P +++ + ++ R + Sbjct: 348 CGAYAVTEGVSLFLSR-RLPRVLLREADGSVVLARDFIE 385 >gi|331082380|ref|ZP_08331506.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium 6_1_63FAA] gi|330400866|gb|EGG80467.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium 6_1_63FAA] Length = 378 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 121/389 (31%), Gaps = 23/389 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP++ + N + + + A KA S + +G Sbjct: 7 NEFSTPYFLVDEKRLLHNLEILKSVSEKSGCKILLAQKAFSMFYAYPLMREYLAGTTASG 66 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + E VFS + + ++ + FN ++ + +A Sbjct: 67 LYEAKLGCE-EFGKETHVFSPAYREKEFDEILKYADDVVFNSPTQFKKFAKKAKAAGKSV 125 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + H + G + ++ + Sbjct: 126 GLRINPQCSTQ---EGHAIYDPCADFSRLGTTLENFEE-----------ELLSELDGLHF 171 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + L+ + ++ + ++ +++GGG I ++ Sbjct: 172 HTLCEQGADALEITLKAVEEKFGKYLYQMKWLNLGGGHHITKAD----YDVEALIRMVRH 227 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ LEPG +V D G LV++V+ ILD + M L Y Sbjct: 228 LKETYDVEVYLEPGEAVVLDAGFLVSQVL-EVVHNGMDIAILDTSAACHMPDVLEMPYRP 286 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 AG++ + GP C GD + A + GDL+ E Y V++ T+ Sbjct: 287 PVKDSGLAGEKA-CTVRLAGPTCLAGDVMGDYSFDAPLKEGDLVVFEDMALYTMVKTNTF 345 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 N L + + + +++ +++ Sbjct: 346 NGMPLPDIVWRDRNGEMKLVKS-FGYEDF 373 >gi|322504420|emb|CAM37403.2| putative ornithine decarboxylase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 636 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 73/406 (17%), Positives = 139/406 (34%), Gaps = 61/406 (15%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + + + +A+K+N A+++ L LGSG D S+GE++ Sbjct: 231 PFYIIDLGRVVEQMARWRHELPM--VRPYFAVKSNPQLALLEVLGALGSGFDCASKGEIQ 288 Query: 88 R--ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + I+F+ K ++ A G+ V++ E++ +++ S Sbjct: 289 TVLDNHLVASPDDIIFANPCKQPGDMREAQARGVTYVTVDNLLEIEKISRLMPSARAVIR 348 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I T+ + KFG+P++ + SL A V + GV H+GS Sbjct: 349 I----------KTNDSKAKCAFSTKFGVPLNDVESLLQAARQFK-VDVYGVSFHVGSSNS 397 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLI 260 ++ A + + QQ G N +D+GGG + ++ Sbjct: 398 DPATYVSAVRDAYHVFQQASQYGFNCTLLDIGGGFPSVETNTASGEATFEDIARAIRPVL 457 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVIS---------------------IKKSADK 299 + FG II EPGR+ A L+ V + ++ Sbjct: 458 EELFGGGDVTIISEPGRYFTASTHALLVNVFASRKLRMSDVEKASSQALQSVVPMDEPEE 517 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH--------------------AD 339 ++ + ++D H ++N + Sbjct: 518 YQYYVNDGLYHSFNCIIFDHAHPTLLLLNDGDGADAVEGNKEEGETSLSSRTRRPLRITT 577 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 I GP C++ D I + + GD + + G+Y + +N Sbjct: 578 IFGPTCDSLDCILRKQPFPEMKLGDWILVPDMGSYTTAAAAPFNGF 623 >gi|154333647|ref|XP_001563080.1| ornithine decarboxylase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 636 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 73/406 (17%), Positives = 139/406 (34%), Gaps = 61/406 (15%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + + + +A+K+N A+++ L LGSG D S+GE++ Sbjct: 231 PFYIIDLGRVVEQMARWRHELPM--VRPYFAVKSNPQLALLEVLGALGSGFDCASKGEIQ 288 Query: 88 R--ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + I+F+ K ++ A G+ V++ E++ +++ S Sbjct: 289 TVLDNHLVASPDDIIFANPCKQPGDMREAQARGVTYVTVDNLLEIEKISRLMPSARAVIR 348 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I T+ + KFG+P++ + SL A V + GV H+GS Sbjct: 349 I----------KTNDSKAKCAFSTKFGVPLNDVESLLQAARQFK-VDVYGVSFHVGSSNS 397 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLI 260 ++ A + + QQ G N +D+GGG + ++ Sbjct: 398 DPATYVSAVRDAYHVFQQASQYGFNCTLLDIGGGFPSVETNTASGEATFEDIARAIRPVL 457 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVIS---------------------IKKSADK 299 + FG II EPGR+ A L+ V + ++ Sbjct: 458 EELFGGGDVTIISEPGRYFTASTHALLVNVFASRKLRMSDVEKASSQALQSVVPMDEPEE 517 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH--------------------AD 339 ++ + ++D H ++N + Sbjct: 518 YQYYVNDGLYHSFNCIIFDHAHPTLLLLNDGDGADAVEGNKEEGETSLSSRTRRPLRITT 577 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 I GP C++ D I + + GD + + G+Y + +N Sbjct: 578 IFGPTCDSLDCILRKQPFPEMKLGDWILVPDMGSYTTAAAAPFNGF 623 >gi|255524070|ref|ZP_05391031.1| Diaminopimelate decarboxylase [Clostridium carboxidivorans P7] gi|255512207|gb|EET88486.1| Diaminopimelate decarboxylase [Clostridium carboxidivorans P7] Length = 238 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 71/225 (31%), Positives = 105/225 (46%), Gaps = 4/225 (1%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQ 65 +G L +LA TP Y + F + F+ G+++ V YA KA N Sbjct: 12 KGHLEIGKCDTTELAKEFGTPLYVVDEDLVRSTCREFKDNFEIEGIESEVIYASKAFLNL 71 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 A+ K + G LD+VS GEL AL A P RI G KT E+ +A+++GI V+ Sbjct: 72 AIAKVICEEGLSLDVVSGGELYTALKANFPVSRIYMHGNNKTEGELSMAIEAGIGRIVVD 131 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL--YA 183 + +EL+ + SL KK + RVNP I A+TH+ I T K + KFG I Sbjct: 132 NRNELEVIEYLCKSLNKKVDVLLRVNPGIEAHTHEYIQTSKNDSKFGESIFDEDMCKIIN 191 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 V G HIGSQI + +SF+ + ++++ + Sbjct: 192 RFQNSESVNFKGFHCHIGSQIFEEKSFYSEVSDMIKFLEKIKKSM 236 >gi|302345615|ref|YP_003813968.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Prevotella melaninogenica ATCC 25845] gi|302149026|gb|ADK95288.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Prevotella melaninogenica ATCC 25845] Length = 395 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 72/391 (18%), Positives = 136/391 (34%), Gaps = 12/391 (3%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP + + N F A +++ Y++K NS ++K G ++VS Sbjct: 8 TPCFILDEQDVAHNICEFKTALSTYFAKSIIGYSVKTNSLPYILKIAKDNGCYAEVVSYH 67 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E + AL + I+++G K+ + A++ N+E+ E+ L+ + Sbjct: 68 EYQLALKVGFQKDHIIYNGPMKSKETFLDAIKH-RAIVNIETWREVDWLDDLPKDQVYEI 126 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I +N + + + F ++ + +KI G+ H + Sbjct: 127 GIRININTSLVSPEDEDHPEDDSRFGFSFESGELDKVINLILKKNNIKIVGIHSH---RE 183 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + S +++ + + + ++++ D+GGG + S A Sbjct: 184 PKTRSVRFYERVICYVQEIILKYNLSLKYWDLGGGFFGCMPNKPTYDEYSK-AFFNALDV 242 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 I+EPG +VA V +VI IK KT+V D ND Y + Sbjct: 243 KLRDITFIVEPGNAIVASGFDYVAEVIDIKDHDGKTYVCTDGTRNDIDPFFRKSDYFKEF 302 Query: 325 YIVNPAGDRLHIHADIVGPICETGD-FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + G C D + GD + + GAY + + Sbjct: 303 CCQGDISVFSQLPQVVSGLTCLEYDRMFTIPAGERKLNIGDRVIFHRVGAYTMSLTPLFI 362 Query: 384 SRLLIPEIMVNGSQFHI--IRPRMTFQELIE 412 P I + S+ H+ IR E I+ Sbjct: 363 HYF--PTIYLKDSKGHLFVIREEWCEDEFIQ 391 >gi|170723475|ref|YP_001751163.1| ornithine decarboxylase [Pseudomonas putida W619] gi|169761478|gb|ACA74794.1| Ornithine decarboxylase [Pseudomonas putida W619] Length = 387 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 90/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I + Y F+ V YA+KAN +I L GS DI Sbjct: 21 ADKQETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + + V A+RI + K +I + G+ + +S E N + G Sbjct: 79 SIYELDKVMGRGVSADRISYGNTIKKSKDIRYFFEKGVRLYATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 SKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + + Sbjct: 249 FLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + + K + L GD LY TGAY Sbjct: 309 MDESIKFPIWTEKKGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLAIGDRLYWLSTGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|85714753|ref|ZP_01045740.1| probable diaminopimelate decarboxylase protein [Nitrobacter sp. Nb-311A] gi|85698638|gb|EAQ36508.1| probable diaminopimelate decarboxylase protein [Nitrobacter sp. Nb-311A] Length = 392 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 93/377 (24%), Positives = 156/377 (41%), Gaps = 14/377 (3%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y + + T + YA+KANS+ +++ L H G ++ S GE++ Sbjct: 19 AYLYDLAHLRRRADTLRRCLP-AQCKLFYAIKANSDAPILRALLHRTDGFEVASLGEIQA 77 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A +VF G GKT E++ AL G+ +VESE +L+ L+ A ++A I Sbjct: 78 VRG-INDAVPVVFGGPGKTDAELEGALDQGVLLIHVESEHQLRRLDWIARRRNQRADILL 136 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 RVNP + + G + +FGI QI +L A LPGV++ G+ +H S + Sbjct: 137 RVNPA-SVPQQATLRMGGQATQFGIEEAQIPALIELALGLPGVRLRGLHIHSISNNLDAQ 195 Query: 209 SFHKAFKLLRD-LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QYFG 265 + + D + R ++ GGG+GI Y + + + + Sbjct: 196 THLALLEHYFDLTSTWQRRYQLEFDWLNAGGGIGINYANPQASFDWEGFCAGLAALIAAR 255 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + +++ E GRFL AD G + V +K + K F IL + F P + H Sbjct: 256 QPRFQLVFECGRFLTADCGYYLADVTDLKHTHGKHFAILRGGSHHFRLPASWQHNHPFVV 315 Query: 326 IVNPAGDRL-------HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + A + G +C D +A + ++ R GD + GAYG Sbjct: 316 LPREAWPYPFSRPAVHETPVTLCGELCTPKDTLACDVRVERLRAGDCIAFLLAGAYGWHI 375 Query: 379 SGT-YNSRLLIPEIMVN 394 S + S + ++ Sbjct: 376 SHHDFLSHPHPERVYLD 392 >gi|291449262|ref|ZP_06588652.1| decarboxylase [Streptomyces roseosporus NRRL 15998] gi|291352209|gb|EFE79113.1| decarboxylase [Streptomyces roseosporus NRRL 15998] Length = 464 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 88/396 (22%), Positives = 149/396 (37%), Gaps = 19/396 (4%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVC-YALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 T + + +AF ++ +A KA S V++ LA G G ++ S GELR AL Sbjct: 54 IDTEGVRASVGALHDAFAATPGVLHTFAAKACSLIPVLRLLAGCGMGCEVASPGELRLAL 113 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A PA RIV KT +EI LAL G+ EL+ ++ + + R+ Sbjct: 114 EAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLA-ELRRIDALRNP-STTSVLGLRI 171 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDMHIGSQIDQIES 209 NP + + +ST KFG+ + + A ++ + H+GSQ +E Sbjct: 172 NPQVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVGSQGCPLEL 231 Query: 210 FHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF--- 264 +L +++ I +D+GGGL + + + P+ +DY + + Sbjct: 232 IAAGVARTYELAEEINGTLGVRQITSLDIGGGLPVNFADETVRPTYADYVAALTAAAPGL 291 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + ++ E GR L+A G + +V K + + + R L + Sbjct: 292 FSGHYALVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLR 351 Query: 325 YIVNPAGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 DI GP C GD +A R++ D++ + TGAY Sbjct: 352 IGAFGPDGVPKGGPVLAQDIAGPCCFAGDVVAYGRELPELAEDDVVVLYDTGAYYFSTPW 411 Query: 381 TYNSRLLIPEIMVN------GSQFHIIRPRMTFQEL 410 YNS F +R + + Sbjct: 412 AYNSLPRPAVYGFRVAGPTGAVTFATVREPQSLDSI 447 >gi|239992274|ref|ZP_04712938.1| putative decarboxylase [Streptomyces roseosporus NRRL 11379] Length = 454 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 88/396 (22%), Positives = 149/396 (37%), Gaps = 19/396 (4%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVC-YALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 T + + +AF ++ +A KA S V++ LA G G ++ S GELR AL Sbjct: 44 IDTEGVRASVGALHDAFAATPGVLHTFAAKACSLIPVLRLLAGCGMGCEVASPGELRLAL 103 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A PA RIV KT +EI LAL G+ EL+ ++ + + R+ Sbjct: 104 EAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLA-ELRRIDALRNP-STTSVLGLRI 161 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDMHIGSQIDQIES 209 NP + + +ST KFG+ + + A ++ + H+GSQ +E Sbjct: 162 NPQVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVGSQGCPLEL 221 Query: 210 FHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF--- 264 +L +++ I +D+GGGL + + + P+ +DY + + Sbjct: 222 IAAGVARTYELAEEINGTLGVRQITSLDIGGGLPVNFADETVRPTYADYVAALTAAAPGL 281 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + ++ E GR L+A G + +V K + + + R L + Sbjct: 282 FSGHYALVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLR 341 Query: 325 YIVNPAGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 DI GP C GD +A R++ D++ + TGAY Sbjct: 342 IGAFGPDGVPKGGPVLAQDIAGPCCFAGDVVAYGRELPELAEDDVVVLYDTGAYYFSTPW 401 Query: 381 TYNSRLLIPEIMVN------GSQFHIIRPRMTFQEL 410 YNS F +R + + Sbjct: 402 AYNSLPRPAVYGFRVAGPTGAVTFATVREPQSLDSI 437 >gi|239945803|ref|ZP_04697740.1| putative decarboxylase [Streptomyces roseosporus NRRL 15998] Length = 434 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 88/396 (22%), Positives = 149/396 (37%), Gaps = 19/396 (4%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVC-YALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 T + + +AF ++ +A KA S V++ LA G G ++ S GELR AL Sbjct: 24 IDTEGVRASVGALHDAFAATPGVLHTFAAKACSLIPVLRLLAGCGMGCEVASPGELRLAL 83 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A PA RIV KT +EI LAL G+ EL+ ++ + + R+ Sbjct: 84 EAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLA-ELRRIDALRNP-STTSVLGLRI 141 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDMHIGSQIDQIES 209 NP + + +ST KFG+ + + A ++ + H+GSQ +E Sbjct: 142 NPQVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVGSQGCPLEL 201 Query: 210 FHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF--- 264 +L +++ I +D+GGGL + + + P+ +DY + + Sbjct: 202 IAAGVARTYELAEEINGTLGVRQITSLDIGGGLPVNFADETVRPTYADYVAALTAAAPGL 261 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + ++ E GR L+A G + +V K + + + R L + Sbjct: 262 FSGHYALVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLR 321 Query: 325 YIVNPAGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 DI GP C GD +A R++ D++ + TGAY Sbjct: 322 IGAFGPDGVPKGGPVLAQDIAGPCCFAGDVVAYGRELPELAEDDVVVLYDTGAYYFSTPW 381 Query: 381 TYNSRLLIPEIMVN------GSQFHIIRPRMTFQEL 410 YNS F +R + + Sbjct: 382 AYNSLPRPAVYGFRVAGPTGAVTFATVREPQSLDSI 417 >gi|284038400|ref|YP_003388330.1| carboxynorspermidine decarboxylase [Spirosoma linguale DSM 74] gi|283817693|gb|ADB39531.1| carboxynorspermidine decarboxylase [Spirosoma linguale DSM 74] Length = 386 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 112/378 (29%), Gaps = 21/378 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 +P + + +N + + ALK S + + SG S E Sbjct: 18 PSPCFVLEEAKLRRNLELIDSVQRAAGVTIILALKGFSMYSAFPLVRQYLSGATASSLNE 77 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++ + ++ +S FN S+ E +GK Sbjct: 78 IKLVNEYMGVQAHTYI-PAYQDATFDEVVSRSSHLTFNSWSQWERFK----DRVVGKPVS 132 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 RVNP + + + G Q+ ++ I Sbjct: 133 CGIRVNPQYSEVATDMYNPCVPGSRLGANRDQLPD-----------QLPEGLEGIHFHTL 181 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + L L + + H + ++ GGG + ++ L+ + Sbjct: 182 CENDSFTLERTLEALESRFDNLLHQAKWVNFGGGHLMTREG----YDTNHLIGLLTAFRQ 237 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 IILEPG + G+LV+ V+ + S ILD + M TL Y Sbjct: 238 KYNVDIILEPGSAIAWQTGVLVSTVLDVFNSQGIDVAILDTSFAAHMPDTLEMPYKPRII 297 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + G C GDF+ GD + + Y V++ T+N Sbjct: 298 HSYHEPVAGKPTYRLGGMTCLAGDFMGDYSFDKPLEVGDTVVFDDMIHYTMVKTTTFNGV 357 Query: 386 LLIPE-IMVNGSQFHIIR 402 L + F +++ Sbjct: 358 NLPAIGVWKEDESFQLVK 375 >gi|17548645|ref|NP_521985.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum GMI1000] gi|17430893|emb|CAD17575.1| probable staphyloferrin b siderophore synthesis decarboxylase protein [Ralstonia solanacearum GMI1000] Length = 413 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 103/393 (26%), Positives = 168/393 (42%), Gaps = 25/393 (6%) Query: 19 EKLAHVV----QTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 +L +P Y Y + + S + YA+KANS+ V+ L Sbjct: 3 RELIERYLQGATSPVCAYLYDLDHLRERAARLSAMLP-PGCELFYAIKANSDAPVLAALD 61 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 +G ++ S GE+ RA A RIVF G GKT DE+ AL+ G+ +VESE +L+ Sbjct: 62 GAVAGYEVASLGEVVRAREVGAQA-RIVFGGPGKTDDELQGALERGVELIHVESELQLRR 120 Query: 133 LNQRAVSLGKKAPIAFRVNPD------INANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 L+ A +G++A + RVNP+ + ++ G + +FGI + L A Sbjct: 121 LDAIACRMGRRARVLLRVNPNPLSADAVGKRAQGTLTMGGQPTQFGIEEDAVPDLIRLAR 180 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYH 245 TLPGV++ G+ +H S +S + L +LR + ++VGGG+G+ Y Sbjct: 181 TLPGVEVVGLHLHALSNNLDADSHLALMRHYLSLALRLRREHGLTLDTLNVGGGIGVDYA 240 Query: 246 SDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + C+I+ E GRF+ AD G VT+V+ +K++ + F + Sbjct: 241 DPSHAFDWRRFCDGLGVLLAEAGAGCRIVFECGRFIAADCGYYVTEVVDLKRNHGRWFAV 300 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH-------ADIVGPICETGDFIALNRK 356 L + F P + H + N D + G +C D +A + Sbjct: 301 LRGGTHHFRLPASWQHNHPFAILPNARWDYPFERPSVLAQAVTLCGELCTPKDVLARDVV 360 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLI 388 + R GD + + GAYG S + S Sbjct: 361 VDRLRVGDRIVFQLAGAYGWHISHHDFLSHPHP 393 >gi|332142513|ref|YP_004428251.1| carboxynorspermidine decarboxylase [Alteromonas macleodii str. 'Deep ecotype'] gi|327552535|gb|AEA99253.1| carboxynorspermidine decarboxylase [Alteromonas macleodii str. 'Deep ecotype'] Length = 376 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 62/395 (15%), Positives = 124/395 (31%), Gaps = 28/395 (7%) Query: 19 EKLAHV--VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L + +P Y + +N + + ALK S + + Sbjct: 2 TDLTQRTDIPSPCYVLEEAKLIRNLELMKRVQEESGARIILALKGFSMWSCFDIIKQYLH 61 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G S E + A A + E +S K D +LA FN S+ Sbjct: 62 GATASSVWEAKLA--AEMGKEVHAYSPAYKANDAKELAGLVNHLSFNSLSQWNTHKEA-- 117 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 +++ + + P L AS L V ++G+ Sbjct: 118 --------------LANVSLGLRINPEHQEADTPLYDPAAPGSRLGIRASELEDVDLTGI 163 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + + +SF A + L + ++ ++ +++GGG + S Sbjct: 164 EGFHCHNLCECDSFATA-RTLEAIEKRFGKWLGQLKWLNLGGGHLMTSEGYDVDHLISTL 222 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 +ILEPG + G L+ +V+ + ++ + + P + Sbjct: 223 ---KDFKTRYSHLDVILEPGSAVAWQTGPLICEVVDMVENDGD--IAILDISATAHMPDV 277 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 + + + D + + G C GD I + GD L E Y Sbjct: 278 LEMPYRPTILGAGMPDEKAYNVKLGGNSCLAGDVIDTYSFDEPLKAGDRLQFEDMMHYTM 337 Query: 377 VQSGTYNSRLLIPE-IMVNGSQFHIIRPRMTFQEL 410 V++ +N I+ F ++R ++++ Sbjct: 338 VKTTFFNGVEHPAIGILRANGDFELVRE-FSYEDF 371 >gi|109001672|ref|XP_001106935.1| PREDICTED: arginine decarboxylase-like isoform 10 [Macaca mulatta] gi|109001675|ref|XP_001107003.1| PREDICTED: arginine decarboxylase-like isoform 11 [Macaca mulatta] Length = 460 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 74/371 (19%), Positives = 134/371 (36%), Gaps = 30/371 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPA +I+++ K I +I A + GI + ++E EL + + S IA Sbjct: 99 VQHIGVPASKIIYANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG+ + L A V++ GV HIGS + Sbjct: 158 ---------TDDSHSLSRLSLKFGVSLKSCRHLLENAKKS-HVEVVGVSFHIGSGCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ +R + + GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADVRLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 I+ E GR+ V + +I+ K + + + + F Sbjct: 268 CGVDILAELGRYYVTSAFTVAVSIIAKKEVLLDQPGKEEENGSTTKTVVYHLDEGVYGIF 327 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P+ ++ + + GP + D +A + GD L + Sbjct: 328 NSVLFDNICPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNM 387 Query: 372 GAYGAVQSGTY 382 GAY + Sbjct: 388 GAYTVGMGSPF 398 >gi|237740055|ref|ZP_04570536.1| diaminopimelate decarboxylase [Fusobacterium sp. 2_1_31] gi|229422072|gb|EEO37119.1| diaminopimelate decarboxylase [Fusobacterium sp. 2_1_31] Length = 400 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 88/409 (21%), Positives = 168/409 (41%), Gaps = 42/409 (10%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + +++ + FY Y I+ + F ++ Y++K NSN V+K++ G G Sbjct: 7 ICEISKKYDS-FYLYDEKIIKNSISNLRKVFPEIEF--LYSVKCNSNVNVLKSIFSEGFG 63 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D S E+ A + +I +S GKT +I++A+ +S E++ +N + Sbjct: 64 ADAASLAEVLMARKLDLDKNKIYYSAPGKTSKDIEVAI--NESNLIADSIEEIRRINMVS 121 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 SL K I R+NPD + K F +KI G+ Sbjct: 122 KSLNKVTEIGVRLNPDFSGKASKFGVDEDIFYDFLHNNSCQ-----------NIKIVGIH 170 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +H+ SQ +E+ +K + L +++++ + ++++++G G+GI Y P Sbjct: 171 VHLKSQELNVETLANYYKNMFLLVEKVQNTLSYKLKYVNMGSGMGIQYSKSDVPLDLDRL 230 Query: 257 ASLIH-----QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 +L+ N I +E GR++ A G + KV+ K S T++IL +N F Sbjct: 231 KNLVKDNLSEFKKHNPDITIFIETGRYVTAKSGFYIMKVLDKKVSYGTTYLILKNTLNGF 290 Query: 312 MRPTLYDAYHEINYIVNPAGDR------------------LHIHADIVGPICETGDFIAL 353 ++P++ + + + +VG +C D IA Sbjct: 291 IKPSVIKLVSKYEKENPVSWEPLFTSKDAFEILTFKEETDKKEKVTLVGNLCTATDVIAE 350 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVN-GSQFHI 400 + + GD++ I G+Y AV S ++S+ E+ ++ I Sbjct: 351 DIVLPSMDCGDIIVINNAGSYAAVLSPMQFSSQEKPVEVFLSVDGSIKI 399 >gi|302875945|ref|YP_003844578.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulovorans 743B] gi|307686655|ref|ZP_07629101.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulovorans 743B] gi|302578802|gb|ADL52814.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulovorans 743B] Length = 485 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 89/459 (19%), Positives = 181/459 (39%), Gaps = 62/459 (13%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLA 72 S+++L P + IE+N + F NA + ++ +C+A+K++ + V++ + Sbjct: 28 GYSIDELEQKYGMPLHILFGKKIEENIMEFRNALNNNYTNSKICFAVKSSCSIGVLRIIN 87 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 LG G+D+ S E + A A +P +R+VF+G KT + I+LA+ I + Sbjct: 88 KLGCGVDVSSYNEFKFAEIAEIPYDRMVFNGNCKTDEIIELAITKDILINVDSVYEFERI 147 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG-IPIHQIHSLYAYASTLPGV 191 L K + ++ T + I T + KFG + L + + Sbjct: 148 LEISKNINKKAKVLIRLSGLKVDKATDECIYTSGEWTKFGINYLEAKELLTNNSVYHQYI 207 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + G +HIGSQI E++ A + + L+++L G+ ++ I++GGG I Y Sbjct: 208 DVYGFQVHIGSQIGYYEAYINAIEKIVKLSEELAHIGNFMRIINIGGGFPINYVDKVEWE 267 Query: 252 SS---SDYASLIHQYFGNLQC--------------------------------------- 269 Y + + Sbjct: 268 QFQKSMAYKGEENSNCFIWKNEKADYKVNELFYTDYEKSKMLEKVLNTYINYKDSSKKIK 327 Query: 270 ---------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 ++I+EPGR +V D GI + KV IKK +++++ ++ +++ + Sbjct: 328 DVLKEIGEPELIIEPGRSIVGDAGITIAKVNGIKKVNGNNLLVVEMGNVNYAGSVIHNLF 387 Query: 321 HEINYIVNPAGDRLHIHAD--IVGPICETGDFIALN--RKIALPRPGDLLYIEKTGAYGA 376 + + + + + I G +C GD I+ + P+ G+ + G Sbjct: 388 NCWDLFKDYSNVDSNEEFSAFICGNLCYNGDMISNYKIKFDREPKRGEYVITYDVGG-TE 446 Query: 377 V--QSGTYNSRLLIPEIMVNG-SQFHIIRPRMTFQELIE 412 + N + +++N + I++ R T ++L++ Sbjct: 447 SHFFASNANMNPIPSRLLINDKNDIEILKSRQTLEDLMK 485 >gi|296114391|ref|ZP_06833045.1| ornithine decarboxylase [Gluconacetobacter hansenii ATCC 23769] gi|295979152|gb|EFG85876.1| ornithine decarboxylase [Gluconacetobacter hansenii ATCC 23769] Length = 376 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 87/378 (23%), Positives = 142/378 (37%), Gaps = 21/378 (5%) Query: 21 LAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA TP +E+ Y A + YA+KAN A++ L LGS D Sbjct: 9 LAEQSPATPCLVVDVDRVEERYSALHAALPL--ARIYYAVKANPAAAILDRLVGLGSAFD 66 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S E++ L A + I F K + I A ++GI F + EL+ L + A Sbjct: 67 AASWEEIQMCLRAGAAPQDISFGNTVKKVSAIAQAYEAGIDMFAFDCAEELEKLARHAPG 126 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + KFG + L A + + G+ H Sbjct: 127 ARVYCRLIVENEGA----------DWPLSRKFGTTLDNARDLMLRARDMG-MDPYGLSFH 175 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA-- 257 +GSQ + ++ A + L L++ G ++ +++GGG I Y D A Sbjct: 176 VGSQQTETGAYEAAIARVGMLFTDLKAAGLELRMVNLGGGFPIRYRDDVPGIDRFALAIS 235 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + ++FGN ++I+EPGRF+V D G++ ++V+ + + V Sbjct: 236 HAMTEHFGNDLPEMIVEPGRFIVGDAGVVSSEVVLVSRRGINDGVRWVYLDIGRFGGLAE 295 Query: 318 DAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGA 373 I Y + D I GP C+ D + + L GD + + TGA Sbjct: 296 TEGEAIRYGIRTPHDGMATGPVAIAGPTCDGADIMYEKTPYNLPLGLESGDRVELLSTGA 355 Query: 374 YGAVQ-SGTYNSRLLIPE 390 Y + S +N + E Sbjct: 356 YVSTYCSTGFNGLAPLSE 373 >gi|269216241|ref|ZP_06160095.1| putative Orn/DAP/Arg decarboxylase 2 [Slackia exigua ATCC 700122] gi|269130500|gb|EEZ61578.1| putative Orn/DAP/Arg decarboxylase 2 [Slackia exigua ATCC 700122] Length = 396 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 82/415 (19%), Positives = 160/415 (38%), Gaps = 35/415 (8%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L + TP + + A+E+ + G +CYA+KAN ++ AH Sbjct: 7 LSAVVADYGTPAFVFDAGALERRIAACRDIV-GETVGLCYAMKANP--FFVRPAAHAADR 63 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 L++ S GEL A + +IV+SGV K ++I A+ G ES ++ +NQ A Sbjct: 64 LEVCSPGELDICKRAAIDPAKIVYSGVNKLPEDIGDAIDYGCGVLTAESLLHVRYINQVA 123 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + G + R+N +FG+ + S+ PG+++ G+ Sbjct: 124 LEKGLVVDVLLRLNAGS---------------QFGMSKEDLVSVVDDLGAWPGIRVVGIH 168 Query: 198 MHIGSQIDQ-IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG--LGIAYHSDHRPPSSS 254 +G+Q + + K+ + + + ++ ++ G G + D + Sbjct: 169 YFVGTQRKKLTHQIKELEKIEAFIDELASEHDFVVERLEYGPGLAVPYFMDDDFSDDLAP 228 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + ++ +E GRF A G VT+ + +K + + ILD MN Sbjct: 229 LKEMADVLKRVATKAELTIEMGRFFAAPCGAYVTRAMDMKSNKGTNYCILDGGMNHLTYF 288 Query: 315 TLYDAYH-----EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 H ++++ + G +C D + ++ RPGD+L Sbjct: 289 GQMMGMHVPQIANLSHLDRTVDAGNVAEWCLCGSLCTINDILTRAVELEDFRPGDVLAFF 348 Query: 370 KTGAYGAVQSGT-YNSRLLIPEIM-VNGSQFHIIRPRMTFQELIELDSIPAWLQK 422 GAY + + SR + ++ + ++R + IE ++ W+Q+ Sbjct: 349 NVGAYSVTEGIHLFLSRTMPRIVVRYDDGSVALVR------DFIETSTL-NWIQQ 396 >gi|157953446|ref|YP_001498337.1| hypothetical protein AR158_C256R [Paramecium bursaria Chlorella virus AR158] gi|156068094|gb|ABU43801.1| hypothetical protein AR158_C256R [Paramecium bursaria Chlorella virus AR158] Length = 372 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 82/359 (22%), Positives = 145/359 (40%), Gaps = 15/359 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY S +E+ ++ F + + YA+K N++ ++KT+ D S E+++ Sbjct: 19 FYVSSPKIVEELVDQWNILFPRI--IPHYAVKCNNDDVLLKTMRDKNVNFDCASSHEIKK 76 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V RI+F+ K+ID++ A G+ +S EL +N+ + I Sbjct: 77 VIHLGVDPSRIIFAHTMKSIDDLIFAKDQGVDIATFDSSFELDKINEYHPTCRMILRIRC 136 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +T + +KFG ++ L +A L +++ G+ H+GS E Sbjct: 137 D----------DPNATVQLGNKFGANDDEVLHLLEHAKKL-NIEVVGISFHVGSGSRNPE 185 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-SDYASLIHQYFGNL 267 ++++A K RD S GH +D+GGGL D + I+ +F Sbjct: 186 AYYRAIKASRDAFDAAVSVGHTPYILDIGGGLHADIDDDEISTYMSENINDAINDFFPEE 245 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 II EPGRF +LVT+VI + + + +++ I +V Sbjct: 246 TIMIIAEPGRFFAEHYSVLVTQVIGKRIRDGLYEYFFNESTYGGFSNVIFEKSIPIPQLV 305 Query: 328 NPAGDRLH-IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D + + + G C+ D I + GD +Y GAY V ++N Sbjct: 306 RYVSDEEEYVPSVLYGCTCDGIDVINQKVALPEMNVGDWVYFNNWGAYTNVLVTSFNGF 364 >gi|295101690|emb|CBK99235.1| carboxynorspermidine decarboxylase [Faecalibacterium prausnitzii L2-6] Length = 404 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 114/386 (29%), Gaps = 15/386 (3%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +N + A KA SN + LA +G + E Sbjct: 25 PTPCYLLDEAQLRRNGEILLGVQQRTGCKILLAQKAFSNFDLYPLLAPCLAGTEASGLYE 84 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 R E VF + + +L + FN ++ +A Sbjct: 85 SRLGKEELPEKENHVFCAAYRVDEFNELLDYADHIVFNSPAQLAKFGPAAKAAGKSVGLR 144 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I + H + G Q + A L + + Q Sbjct: 145 INPERSTQ---EGHAIYDPCAPGSRLGTTRAQWDAALAKQPGLAALLDGLHFHTLCEQDA 201 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + L + ++ ++ ++ GGG I + + I + Sbjct: 202 DALAV-----TLDAVEEKFGDLLPGLKWLNFGGGHHITRPG----YDLAALEACIARMQE 252 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + G LVT V+ ++ + + ILD++ + Y Sbjct: 253 KYGVQVYLEPGEAWALNAGYLVTTVLDTLQNGNTSLAILDMSAACHTPDVIEMPYRPPLL 312 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 G++ + GP C GD + A GD L Y ++ T+N Sbjct: 313 DAGEPGEKP-CTIRLGGPTCLAGDVVGDYSFDAPLAEGDRLLFGDMAIYTTCKNNTFNGM 371 Query: 386 LLIPE-IMVNGSQFHIIRPRMTFQEL 410 L P + + R + + Sbjct: 372 PLPPIWALAEDGTCRELV-RFGYNDF 396 >gi|119385681|ref|YP_916736.1| carboxynorspermidine decarboxylase [Paracoccus denitrificans PD1222] gi|119376276|gb|ABL71040.1| carboxynorspermidine decarboxylase [Paracoccus denitrificans PD1222] Length = 368 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 55/385 (14%), Positives = 102/385 (26%), Gaps = 28/385 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y + +N + ALK + + + G S E Sbjct: 5 QTPYYLIDLARLRENMERIRYLRERSGAKCLLALKCFATWSAFDFMRDFMDGTTSSSLFE 64 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 LR E +S + + + FN +L RA G Sbjct: 65 LRLGHE-EFGKETHAYSVAWADHEIDEALGYADKIIFNSLG--QLDRFGARAAQRGIAMG 121 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + P L + + + + Sbjct: 122 LRLNPRFSTS------------GFDLADPARPFSRLGEWDLNRLEQALDRISGVMIHYNC 169 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F L + + + + +GGG+ H A + + Sbjct: 170 ENADFELFDAQLARIETEFGGFLERLDWVSLGGGI----HFTGEGYPLDRLADRLRAFSE 225 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y ++ Sbjct: 226 RFGVQVFLEPGEASITRSTSLEVTVLDVIHHGKDVAIVDSSIEAHMLDLLIYRETAKLPQ 285 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 I G C GD R + GD L I G Y V+ +N Sbjct: 286 DG-------EHPWQIAGKTCLAGDIFGEGRFAQPLKVGDRLSIADAGGYTMVKKNWFNGV 338 Query: 386 LLIPEIMVN-GSQFHIIRPRMTFQE 409 + + + H +R R T+ + Sbjct: 339 PMPAIAIRDEDGTIHEVR-RFTYDD 362 >gi|332655177|ref|ZP_08420918.1| carboxynorspermidine decarboxylase [Ruminococcaceae bacterium D16] gi|332516037|gb|EGJ45646.1| carboxynorspermidine decarboxylase [Ruminococcaceae bacterium D16] Length = 404 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 60/374 (16%), Positives = 112/374 (29%), Gaps = 15/374 (4%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 N + L + TP Y + +N + + V A KA SN LA Sbjct: 17 NYDPKALFASLPTPAYVIDQERLRENGQVLAALSERTGCKVLLAQKAFSNYDFYPLLAPY 76 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 +G + E R E VF G + + +L + FN + + Sbjct: 77 LAGTEASGLYEARLGKEEMPEKEVHVFCGAYRMDEFEELLQYADHIVFNSIHQLKAFGPK 136 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + I + + + + + L G+ Sbjct: 137 GKQAGKSLGLRINPQCSTQ-EGHAIYDPCAPGSRMGVTRDVWDQEMDEDTLALLDGLHF- 194 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 D +++ A + ++ ++ +++GGG I + Sbjct: 195 --HTLCEQNSDDLKTTLHAVE------EKFGDILPQMKWLNMGGGHHITRPD----YDLA 242 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + I + LEPG + + G V++V+ I +++ ILD + M Sbjct: 243 TLEACIRHAQQAWGVTVYLEPGEAVALNAGYFVSRVLDIVENSGTKIAILDASAACHMPD 302 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 L Y + + GP C GD + + GDL+ Y Sbjct: 303 VLEMPYQPPILGADTQ-PGEGHPFRLAGPTCLAGDVVGDYSFESELHVGDLVLFGDMAIY 361 Query: 375 GAVQSGTYNSRLLI 388 ++ T+N L Sbjct: 362 TTCKNNTFNGMPLP 375 >gi|325275905|ref|ZP_08141752.1| ornithine decarboxylase [Pseudomonas sp. TJI-51] gi|324098955|gb|EGB96954.1| ornithine decarboxylase [Pseudomonas sp. TJI-51] Length = 387 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 143/373 (38%), Gaps = 19/373 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I + Y F+ V YA+KAN +I L GS DI Sbjct: 21 ADKQETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + L V A+RI + K +I + G+ + +S E N + G Sbjct: 79 SIYELDKVLGRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDS--EADLRNIAKAAPG 136 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + A KFG L A L V G+ H+G Sbjct: 137 SKVYVRILTEGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVG 188 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYAS 258 SQ I + A ++ + ++L+ ++ I++GGG Y + + + Sbjct: 189 SQQRDISVWDAAIAKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIR 248 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + + FG+ +IILEPGR L+A+ GILV++V+ + + + + Sbjct: 249 FLKEDFGDELPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIET 308 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYG 375 I + + I GP C++ D + N K + L GD LY TGAY Sbjct: 309 MDEAIKFPIWTEKKGETEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLATGAYT 368 Query: 376 AVQSG-TYNSRLL 387 S +N Sbjct: 369 TSYSAVEFNGFPP 381 >gi|225572465|ref|ZP_03781329.1| hypothetical protein RUMHYD_00762 [Blautia hydrogenotrophica DSM 10507] gi|225040102|gb|EEG50348.1| hypothetical protein RUMHYD_00762 [Blautia hydrogenotrophica DSM 10507] Length = 432 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 93/405 (22%), Positives = 172/405 (42%), Gaps = 37/405 (9%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 +E+ A + FY Y I + F + Y++K NSN VI ++ G G Sbjct: 18 VEEQAKRYDS-FYLYDERKIVDSIRRLKQHFP--NIEFLYSIKCNSNPYVINSVFAQGLG 74 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D S GE+R+A+AA E+I +S GK++++I+ ++S + + E + + Sbjct: 75 ADAASAGEVRKAVAAGQKKEKIYYSAAGKSMEDIESTMESAVLIADSIEEIKRIQFAAKH 134 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 +L + I N KFGI + + + P V+++G+ Sbjct: 135 RNLVVEIGIRINPN-------FSFYKNEGMPSKFGIDEEEALAFLRE-NRFPNVRVTGIH 186 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +H+ SQ E + ++ + +L ++ + ++ ++++G G+GI Y R + + Sbjct: 187 VHLRSQELNTELLARYYENVLELARRVQKVTDVSLDYVNMGAGMGIPYAVKDRALNLKEL 246 Query: 257 -----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 A++ + ++E GR +V G+ VTKV+ K S KT++IL +N F Sbjct: 247 GQSVEAAVARFREEFPGIRAMIETGRHVVGKAGVYVTKVMDRKVSHAKTYIILKNTLNGF 306 Query: 312 MRPTLYDAYHEINYIVNPAGD-------------------RLHIHADIVGPICETGDFIA 352 +RP+L + D+VG +C D IA Sbjct: 307 IRPSLACLVERYWQGQQSPEGSEPLFTGTDAFQFLTLRERKPAERVDLVGNLCTATDIIA 366 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGS 396 N + GD++ I GAY AV S +++++ E+ +N Sbjct: 367 ENLVMPRLECGDVVVITNAGAYAAVLSPVQFSTQIRPIELFLNED 411 >gi|88798871|ref|ZP_01114453.1| carboxynorspermidine decarboxylase [Reinekea sp. MED297] gi|88778351|gb|EAR09544.1| carboxynorspermidine decarboxylase [Reinekea sp. MED297] Length = 388 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 66/390 (16%), Positives = 115/390 (29%), Gaps = 22/390 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P + AIE+N + + + ALKA S SG Sbjct: 13 RVPSPCFVVDEVAIERNLKILHDVAEQSGARILGALKAFSMWHFGPLTGQYLSGTCSSGL 72 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN-QRAVSLGK 142 E R A P E VFS D ++ + FN S+ + Q A++ Sbjct: 73 HEARLAKD-YYPGEVHVFSAAFSQPDLEEILTLADHVVFNSCSQWQRFQPQIQAALAKRP 131 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 R+NP+ + + GIP+ ++ + Sbjct: 132 HMDFGLRINPEHSEGDVPIYDPCAPGSRLGIPLSELDESALEGI-----------SGLHF 180 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + L ++ ++ I+ GGG I I Sbjct: 181 HTLCEQGFEPLDRTLTVFEEKFGHLFSKMKWINFGGGHHITAPD----YDREALIRRIRA 236 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G+LV +V+ + + + P + + Sbjct: 237 FKEKYNVEVYLEPGEAMAIGSGVLVAEVLDLTF--NTLPQAILDTSATCHMPDTLEMPYR 294 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + G C GD I G L E Y V++ T+ Sbjct: 295 ADISNAGEPGEKAHTYRLGGLTCLAGDVIGDYSFDQPLEIGQRLIFEDMAHYTMVKTSTF 354 Query: 383 NSRLLIPEIMVNGS--QFHIIRPRMTFQEL 410 N +P I V S + + + Sbjct: 355 NG-TRLPSIAVWNSTTDAFSVVRDFDYDDF 383 >gi|322420302|ref|YP_004199525.1| carboxynorspermidine decarboxylase [Geobacter sp. M18] gi|320126689|gb|ADW14249.1| carboxynorspermidine decarboxylase [Geobacter sp. M18] Length = 384 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 64/403 (15%), Positives = 123/403 (30%), Gaps = 28/403 (6%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 LH + + +LA +P + + N + ALKA S +V Sbjct: 3 RLHVDEM--TRLA---PSPAFVVDLGRLRHNLAILDEVQKRSGAKILLALKAFSMWSVFP 57 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 + G+ S E R E FS K D +L S FN ++ E Sbjct: 58 IIEKTLHGICASSPWEARLGRE-EFGGEVHSFSAAFKESDVAELLTTSNHLVFNSFNQLE 116 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + I RVNP + + + G I + + + Sbjct: 117 RFR--SMWEEYAGRVSIGLRVNPGHSEGHTPIYDPAAPKSRLG--ILRSEFEGRSLAGVE 172 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 G+ + + + + +Q ++ +++GGG +H Sbjct: 173 GLHFHTLCEQLFD---------PLERTAKVFEEQFGEFLPRMKWLNLGGG----HHITRE 219 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 L+ + ++ LEPG + GILV++V+ + ++ + + Sbjct: 220 GYDIDALVELVRYFRRKYDLEVYLEPGEAIAIGTGILVSEVLDVVH--NEVDIAVLDVSA 277 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 P + + + + GP C GD I G+ L Sbjct: 278 TCHMPDILEMPYRPEIQNGYLPGEKGHDYRLGGPSCLAGDVIGDWSFDHRLAIGEKLAFL 337 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVN--GSQFHIIRPRMTFQEL 410 Y V++ T+N L + ++R +++ Sbjct: 338 DMSHYTMVKTTTFNGIQLPHICTYEPQTGELRVVRS-FGYEDF 379 >gi|313672850|ref|YP_004050961.1| carboxynorspermidine decarboxylase [Calditerrivibrio nitroreducens DSM 19672] gi|312939606|gb|ADR18798.1| carboxynorspermidine decarboxylase [Calditerrivibrio nitroreducens DSM 19672] Length = 394 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 70/387 (18%), Positives = 123/387 (31%), Gaps = 22/387 (5%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 + V++P Y S IE+N + + + ALKA + V + G+ Sbjct: 17 RAITDQVESPSYLISEDLIEENCKILHSIKERTGARILLALKAFALPEVFPIIGKYLDGV 76 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 E R E FS D+ S FN ++ R + Sbjct: 77 CASGPYEARLGRE-EFGKEVHTFSPAYTDETIKDVIATSDHVVFNSLNQF----YKYRDL 131 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 I RVNP + + +FG+ L + G+ Sbjct: 132 VKDAGKEIGLRVNPGYSEVEIPLYDPCQVGSRFGV-------LSDDIKNADLESLDGLHF 184 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 H Q + K++ ++ ++ ++ GGG I R S + Sbjct: 185 HAMCQQ----NADVLEKIVVSFKKRFDDVIKKVKWVNFGGGHHITRDGYDREKLVSIIKN 240 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Y KI LEPG +V + G+LV+ V+ I K+ + ++ A N + Sbjct: 241 FYSDY--PNIQKIYLEPGEAVVFNAGVLVSTVLDIIKNGMEIAILDTSAENHMP--DVLA 296 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + + + G C GD I + GD L Y V+ Sbjct: 297 MPYRPEIFGSGLVGENPYTYRLGGVTCLAGDVIGDYSFKNPLKVGDRLVFTDMALYSFVK 356 Query: 379 SGTYNSRLLIPEIM--VNGSQFHIIRP 403 + +N L ++ + + ++R Sbjct: 357 NTMFNGIHLPSLVVFNLKNGKLKVVRR 383 >gi|238879425|gb|EEQ43063.1| ornithine decarboxylase [Candida albicans WO-1] Length = 473 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 83/393 (21%), Positives = 141/393 (35%), Gaps = 49/393 (12%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE--L 86 F+ I + + + YA+K NSN ++ TL+ LG D S+ E L Sbjct: 77 FFVCDLGEIINSVNQWQQSLPM--VQPYYAVKCNSNPQILTTLSELGVNFDCASKNEIDL 134 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 +L ERI+++ KT I A + V++ EL L + + Sbjct: 135 VLSLGIHQAHERIIYANPCKTNSFIRHAANENVNLTTVDNVHELYKLAKFHPHCKILIRL 194 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 T + + KFG ++ + G+++ GV H+GS Sbjct: 195 I----------TDDSTAQCQLSTKFGCDLNTAIGEILPKAKELGLQVHGVAFHVGSGAKD 244 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQYFG 265 S ++A K R L ++ S G + +D+GGG ++ Sbjct: 245 FSSIYQAIKDSRILFDEMLSMGFTPKLLDIGGGFERETFPQSSQMVKFALEKFFPIEFSQ 304 Query: 266 NLQCKIILEPGRFLVADVGILVTKVI-------------------SIKKSADKTFVILDV 306 + + K I EPGRF+VA+ L+T +I ++ D + L+ Sbjct: 305 SNEIKFIAEPGRFMVANAFTLITHIIARRDLPTGGNNHNNDMTPSAMLYINDGVYGNLNC 364 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLH--------------IHADIVGPICETGDFIA 352 + D P +Y +E R I GP C+ D ++ Sbjct: 365 ILFDHQTPKVYVLTNENQLFYKQEMMRSLSVNNNNNNNNKTDGFKFSIWGPTCDGLDCVS 424 Query: 353 LNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNS 384 K++ + GD L+ E GAY + S +N Sbjct: 425 SLAKLSKNVQVGDWLFFENVGAYTSCASTKFNG 457 >gi|221120904|ref|XP_002160819.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 370 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 78/368 (21%), Positives = 135/368 (36%), Gaps = 26/368 (7%) Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+K N + VI LAHLG D S+ E++ L V +RI+F+ K I A + Sbjct: 3 AIKCNPDPVVIALLAHLGVNFDCASKCEIKAVLDLGVDPDRIIFANPCKQASYIKYANEK 62 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 + ++E+EL + + I S K KFG + Sbjct: 63 NVKKMTFDNEAELYKIKEHFPGAELVIRIKVD----------DSKSIYKLGRKFGASLES 112 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 L A L + GV H+G+ F+ A K + Q G+N +D+G Sbjct: 113 TQKLLHIAKDLDL-NVIGVSFHVGTGCYDASLFYSAVKSAAAVFNQGEILGYNFTLLDIG 171 Query: 238 GGLGIAYHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 GG + + + + + + + II EPG++ V L V S++K Sbjct: 172 GGFPGVKNGKISMDNIAAQLNLSIAEFFPPEMNLSIIAEPGKYFVESAFTLCCNVTSVRK 231 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI---HADIVGPICETGDFIA 352 D +ND + + + P D + + GP C++ D I+ Sbjct: 232 VVDDKKTEFMYYLNDGVYNSFLCVLFSEKFKPVPLNDSKTHLLFKSSVWGPTCDSCDCIS 291 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM---------VNGSQFHIIRP 403 + GD LY E GAY + +N ++ + ++++ Sbjct: 292 EETYLPKLSIGDWLYFENMGAYATCLATKFNGFNPPIIYYACTDSIYKDLSNGKANLMQC 351 Query: 404 RMTFQELI 411 R +F++ Sbjct: 352 R-SFKDFF 358 >gi|68473782|ref|XP_718994.1| hypothetical protein CaO19.6032 [Candida albicans SC5314] gi|68473991|ref|XP_718892.1| hypothetical protein CaO19.13453 [Candida albicans SC5314] gi|2499344|sp|P78599|DCOR_CANAL RecName: Full=Ornithine decarboxylase; Short=ODC gi|1814084|gb|AAC49877.1| ornithine decarboxylase [Candida albicans] gi|46440685|gb|EAK99988.1| hypothetical protein CaO19.13453 [Candida albicans SC5314] gi|46440791|gb|EAL00093.1| hypothetical protein CaO19.6032 [Candida albicans SC5314] Length = 473 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 83/393 (21%), Positives = 140/393 (35%), Gaps = 49/393 (12%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE--L 86 F+ I + + YA+K NSN ++ TL+ LG D S+ E L Sbjct: 77 FFVCDLGEIINSVNQWQQILPM--VQPYYAVKCNSNPQILTTLSELGVNFDCASKNEIDL 134 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 +L ERI+++ KT I A + V++ EL L + + Sbjct: 135 VLSLGIHQAHERIIYANPCKTNSFIRHAADENVNLTTVDNVHELYKLAKFHPHCKILIRL 194 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 T + + KFG ++ + G+++ GV H+GS Sbjct: 195 I----------TDDSTAQCQLSTKFGCDLNTAIGEILPKAKELGLQVHGVAFHVGSGAKD 244 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQYFG 265 S ++A K R L ++ S G + +D+GGG ++ Sbjct: 245 FSSIYQAIKDSRILFDEMLSMGFTPKLLDIGGGFERETFPQSSQMVKFALEKFFPIEFSQ 304 Query: 266 NLQCKIILEPGRFLVADVGILVTKVI-------------------SIKKSADKTFVILDV 306 + + K I EPGRF+VA+ L+T +I ++ D + L+ Sbjct: 305 SNEIKFIAEPGRFMVANAFTLITHIIARRDLPTGGNNNNNDMTPSAMLYINDGVYGNLNC 364 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLH--------------IHADIVGPICETGDFIA 352 + D P +Y +E R I GP C+ D ++ Sbjct: 365 ILFDHQTPKVYVLTNENQLFYKQEMMRSLSVNNNNNNNNKTDGFKFSIWGPTCDGLDCVS 424 Query: 353 LNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNS 384 K++ + GD L+ E GAY + S +N Sbjct: 425 SLAKLSKNVQVGDWLFFENVGAYTSCASTKFNG 457 >gi|254492579|ref|ZP_05105751.1| carboxynorspermidine decarboxylase [Methylophaga thiooxidans DMS010] gi|224462471|gb|EEF78748.1| carboxynorspermidine decarboxylase [Methylophaga thiooxydans DMS010] Length = 388 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 60/401 (14%), Positives = 120/401 (29%), Gaps = 26/401 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 + L +L +P + A+E+N S+ + + ALKA S + Sbjct: 6 FGKLDLSRL----PSPCFVVDEVAVERNLRILSDVAEASGAKILGALKAFSMWSFGNMTH 61 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 SG E + E VF+ D +L + FN + Sbjct: 62 QYLSGTCASGLHEAKLGHE-EYGGEVHVFAAAFSQADIDELLTFAHHIVFNSCGQWLRFR 120 Query: 133 -LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 A + R+NP+ + T + GI + Q+ Sbjct: 121 EQCLAAKKQRPELQFGLRINPEHSEGTVPIYDPCAPGSRLGITLSQLDESVLDGI----- 175 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + F + + + + + ++ GGG I Sbjct: 176 ------TGLHFHTLCEQGFEPLSRTVAAVEKNFGHLLSQMDWVNFGGGHHITADG----Y 225 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + ++ + ++ +EPG + G+L +V+ I + ++ A Sbjct: 226 NINGLVEMVQVFRQRHNVEVYMEPGEAMAIGTGVLSCEVLDITWNQINQAILDTSATCHM 285 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + + + ++L + G C GD I G L E Sbjct: 286 P--DTLEMPYRPDITGAAEAEKLSHTYRLGGLTCLAGDVIGDYSFAKPLEIGQRLVFEDM 343 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFH--IIRPRMTFQEL 410 G Y V++ T+N L I + S+ + + + Sbjct: 344 GHYTMVKTTTFNGTKLPA-IAIWNSETDALCVVKEFGYADF 383 >gi|297157946|gb|ADI07658.1| diaminopimelate decarboxylase [Streptomyces bingchenggensis BCW-1] Length = 447 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 91/395 (23%), Positives = 150/395 (37%), Gaps = 29/395 (7%) Query: 47 AFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGK 106 G + +A+KA S V++ LA G G ++ S GEL A AA V AE IV K Sbjct: 40 VAPGTPVLHAFAVKAASLVPVLRLLADEGIGCEVASPGELALARAAGVRAEHIVLDAPAK 99 Query: 107 TIDEIDLALQSGIYCFNVESESELK-----TLNQRAVSLGKKAPIAFRVNPDINANTHKK 161 T E+ A++ GI + + P+ RVNP + + Sbjct: 100 TTAELREAIELGIAVNADNPQELARLDALVRPRNGPGPALPPGPLGLRVNPQVGGGSIGA 159 Query: 162 ISTGKKEDKFGIPIHQIHSLYAYASTL-PGVKISGVDMHIGSQIDQIESFHKAFKLLRDL 220 +ST KFG+ + + + ++ + H+GSQ +E + +L Sbjct: 160 LSTATATSKFGVALLDPGAREWVVNAFTRRPWLTRLHAHVGSQGCPLELMAAGVRAAYEL 219 Query: 221 TQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS---LIHQYFGNLQCKIILEP 275 +++ I +D+GGGL + + SD P DYA + + ++ E Sbjct: 220 AEEINRAVGRQQIDTLDIGGGLPVNFGSDEITPGYRDYARLLLDTVPGLFDGRYGLVTEF 279 Query: 276 GRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE-------INYIVN 328 GR L+A G ++ +V K + + I R + Sbjct: 280 GRSLLAKSGTVLARVEYAKSAGGRPIAITHAGAQLATRTVFAPESWPLRVTAYDWEGVAK 339 Query: 329 PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 P G + D+ GP C GD +A++R + + GDL+ + TGAY YNS Sbjct: 340 PTGPDGPVAQDVAGPCCFAGDLVAVDRPLPELKAGDLVALLDTGAYYFSNHFAYNSLPRP 399 Query: 389 PEIM--VNGS---------QFHIIRPRMTFQELIE 412 V G +F +R + E++ Sbjct: 400 GIYGFSVTGGGSGSRKGHVRFAPVRSPQSLDEIVA 434 >gi|325291264|ref|YP_004267445.1| carboxynorspermidine decarboxylase [Syntrophobotulus glycolicus DSM 8271] gi|324966665|gb|ADY57444.1| carboxynorspermidine decarboxylase [Syntrophobotulus glycolicus DSM 8271] Length = 377 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 71/379 (18%), Positives = 115/379 (30%), Gaps = 22/379 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 V TP Y + KN + + + A KA S V LA G Sbjct: 8 VPTPSYVIEEKLLVKNLEILKSVQERSGARILLAQKAFSMFRVYPLLARYLCGTTASGLY 67 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R E +FS + + ++ + FN ++ E A Sbjct: 68 EARLGRE-EFGKEVHIFSPAYRDDEFEEILAVADHIVFNSFAQWEKFGRRTLAAGKKCGL 126 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I + + + + + K++G+ + Sbjct: 127 RINPECSTQNGPDLYNPCAPHSRLGVTKA-------------NFQPDKLAGISGLHLHTL 173 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 Q + A + L+ ++++ +++GGG I I + Sbjct: 174 CQQNADALA-ETLKAFEAGFGEYLYDLEWLNLGGGHHITREDYDLDL----LVRTISRLR 228 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + LEPG + D G LV+ V+ I ILD + M L Y Sbjct: 229 QTYDLTVYLEPGEAVALDSGFLVSSVLDIL-DNGMNIAILDTSAACHMPDVLEMPYRPEI 287 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 G++ + GP C GD I PGD L Y V++ T+N Sbjct: 288 IGAGQPGEK-KYTYRLGGPTCLAGDIIGDYSFDRPLFPGDRLVFCDMAIYSMVKNNTFNG 346 Query: 385 RLLIPEIMVN-GSQFHIIR 402 L I+ G IIR Sbjct: 347 MRLPDIILRTAGGTDEIIR 365 >gi|149378202|ref|ZP_01895918.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Marinobacter algicola DG893] gi|149357526|gb|EDM46032.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2 [Marinobacter algicola DG893] Length = 391 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 81/378 (21%), Positives = 147/378 (38%), Gaps = 19/378 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 ++ A TP T I + Y F + V YA+KAN V+ L G+ Sbjct: 20 RIKAFADTKDTPCVVIDTATINRQYDELVEGFPYAN--VYYAVKANPAPQVLTMLRDKGA 77 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI S EL + + V +RI + K +I + G+ + +SE++L+ + + Sbjct: 78 SFDIASVYELDKVMGLGVTGDRISYGNTIKKAKDIRTFYERGVRLYATDSEADLRNIAKA 137 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + T ++ + + A L GV Sbjct: 138 APGSKVYVRI-------LTEGTLTADWPLSRKFGCQTDMAMDLLILARDLGL---VPYGV 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS- 254 H+GSQ +I ++ A ++ + ++L+ ++ I++GGG Y + + Sbjct: 188 SFHVGSQQREIGAWDAALGKVKVIFERLKEEDGIELKMINMGGGFPANYITRTNDLKTYA 247 Query: 255 -DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + + FG+ +II+EPGR L+++ G+LV++V+ I + + Sbjct: 248 EEIKRFLDEDFGDDLPEIIIEPGRSLISNAGVLVSEVVLISRKSRTALHRWVFTDVGKFG 307 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEK 370 + I + + I GP C++ D + + K LP GD +Y Sbjct: 308 GLIETLDESIKFPIFTEKSGEGEDCVIAGPTCDSADIMYEHHKYPLPLNLAIGDRMYWLS 367 Query: 371 TGAYGAVQSG-TYNSRLL 387 TGAY S +N Sbjct: 368 TGAYTTTYSAIEFNGFPP 385 >gi|126176045|ref|YP_001052194.1| diaminopimelate decarboxylase [Shewanella baltica OS155] gi|152999015|ref|YP_001364696.1| diaminopimelate decarboxylase [Shewanella baltica OS185] gi|304411520|ref|ZP_07393133.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica OS183] gi|307306704|ref|ZP_07586446.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica BA175] gi|125999250|gb|ABN63325.1| ornithine decarboxylase [Shewanella baltica OS155] gi|151363633|gb|ABS06633.1| Diaminopimelate decarboxylase [Shewanella baltica OS185] gi|304350047|gb|EFM14452.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica OS183] gi|306910672|gb|EFN41101.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica BA175] Length = 391 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 88/394 (22%), Positives = 148/394 (37%), Gaps = 30/394 (7%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M FK +E A TPF T+ I K Y N+F + V YA+K Sbjct: 15 MDTFK-----------RIEAFAKDKATPFVVIDTSIIAKQYDDMVNSFPYAN--VYYAVK 61 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN ++ L GS DI S EL + V +R+ + K ++ + G+ Sbjct: 62 ANPAAEILSLLKDKGSNFDIASIYELDMVMNVGVTTDRVSYGNTIKKRQDVRAFYERGVR 121 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 + +SE++L+ + + A I + KFG + Sbjct: 122 MYASDSEADLRMIAEEAPGSRIYVRILTEGTDTAD---------WPLSRKFGCQNEMAYE 172 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGG 239 L A L ++ G+ H+GSQ I ++ A ++ + +LR + ++ I++GGG Sbjct: 173 LLVLAQELG-LEPFGISFHVGSQQRDIGAWDSAIGKVKSIFDRLRDEHNITLKMINMGGG 231 Query: 240 LGIAYHSDHRPPSSS--DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 Y + + FG+ +IILEPGR L+++ GILV++V+ I K + Sbjct: 232 FPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQIILEPGRSLISNAGILVSEVVLISKKS 291 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK- 356 + I + + I GP C++ D + + Sbjct: 292 YTALERWVFTDVGKFSGLIETMDEAIKFPIYTDRQGELDKCVIAGPTCDSADIMYEHYSY 351 Query: 357 -IA-LPRPGDLLYIEKTGAYGAVQSGT-YNSRLL 387 + GD +Y GAY S +N Sbjct: 352 GLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFPP 385 >gi|217971695|ref|YP_002356446.1| Diaminopimelate decarboxylase [Shewanella baltica OS223] gi|217496830|gb|ACK45023.1| Diaminopimelate decarboxylase [Shewanella baltica OS223] Length = 391 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 88/394 (22%), Positives = 147/394 (37%), Gaps = 30/394 (7%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M FK +E A TPF T+ I K Y N+F + V YA+K Sbjct: 15 MDTFK-----------RIEAFAKDKATPFVVIDTSIIAKQYDDMVNSFPYAN--VYYAVK 61 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 AN ++ L GS DI S EL + V +R+ + K ++ + G+ Sbjct: 62 ANPAAEILSLLKDKGSNFDIASIYELDMVMNVGVTTDRVSYGNTIKKRQDVRAFYERGVR 121 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 + +SE++L+ + + A I + KFG + Sbjct: 122 MYASDSEADLRMIAEEAPGSRIYVRILTEGTDTAD---------WPLSRKFGCQNEMAYE 172 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGG 239 L A L ++ G+ H+GSQ I ++ A ++ + +LR ++ I++GGG Sbjct: 173 LLVLAQELG-LEPFGISFHVGSQQRDIGAWDSAIGKVKSIFDRLRDEHSITLKMINMGGG 231 Query: 240 LGIAYHSDHRPPSSS--DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 Y + + FG+ +IILEPGR L+++ GILV++V+ I K + Sbjct: 232 FPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQIILEPGRSLISNAGILVSEVVLISKKS 291 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK- 356 + I + + I GP C++ D + + Sbjct: 292 YTALERWVFTDVGKFSGLIETMDEAIKFPIYTDRQGELDKCVIAGPTCDSADIMYEHYSY 351 Query: 357 -IA-LPRPGDLLYIEKTGAYGAVQSGT-YNSRLL 387 + GD +Y GAY S +N Sbjct: 352 GLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFPP 385 >gi|299068847|emb|CBJ40088.1| putative diaminopimelate decarboxylase protein (lysA) [Ralstonia solanacearum CMR15] Length = 413 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 104/393 (26%), Positives = 168/393 (42%), Gaps = 25/393 (6%) Query: 19 EKLAHVV----QTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 +L +P Y Y + + S + YA+KANS+ V+ L Sbjct: 3 RELIERYLQGATSPVCAYLYDLDHLRERAARLSAMLP-PGCELFYAIKANSDAPVLAALD 61 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 +G ++ S GE+ RA A RIVF G GKT DE+ AL+ G+ +VESE +L+ Sbjct: 62 GAVAGYEVASLGEVVRAREVGAHA-RIVFGGPGKTDDELQGALERGVELIHVESELQLRR 120 Query: 133 LNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKE---DKFGIPIHQIHSLYAYAS 186 L+ A +G++A + RVNP+ +A + T +FGI + L A Sbjct: 121 LDAIACRMGRRARVLLRVNPNPLAADAGGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLAR 180 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYH 245 TLPGV++ G+ +H S +S + L +LR + ++VGGG+G+ Y Sbjct: 181 TLPGVEVVGLHLHALSNNLDADSHLALMRHYLALALRLRREHGLTLDTLNVGGGIGVDYA 240 Query: 246 SDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + C+I+ E GRF+ AD G VT+V+ +K++ + F + Sbjct: 241 NPSHAFDWRRFCDGLGVLLAEAGAGCRIVFECGRFIAADCGYYVTEVVDLKRNHGQWFAV 300 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH-------ADIVGPICETGDFIALNRK 356 L + F P + H + N D + G +C D +A + Sbjct: 301 LRGGTHHFRLPASWQHNHPFAILPNARWDYSFERPSVQAQAVTLCGELCTPKDVLARDVV 360 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLI 388 + R GD + + GAYG S + S Sbjct: 361 VDRLRVGDRIVFQLAGAYGWHISHHDFLSHPHP 393 >gi|311894695|dbj|BAJ27103.1| putative diaminopimelate decarboxylase [Kitasatospora setae KM-6054] Length = 396 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 74/386 (19%), Positives = 127/386 (32%), Gaps = 23/386 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL +L P Y Y A+ + A + YA KAN + ++ L L Sbjct: 9 SLTEL------PAYLYDLAALRAHVRRVRAALPE-RVELYYAAKANPDGPLLTALHGLVD 61 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G ++ S GEL A A + + ++VESE EL L Sbjct: 62 GYEVSSGGELAHVHAVVPDAPLAFGGPGKSAEEIAAALRLPAVRRWHVESERELHALAA- 120 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK--FGIPIHQIHSLYAYA--STLPGVK 192 + + + RVN + ++ FG+ ++ A ++ Sbjct: 121 --AADRPVDVLLRVNLPVGDGALDGVALAMGGRPTPFGLDPERVERCLALLASPGFGHLR 178 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + G+ H+ S + E A +++ + +G ++VGGG+ + Y Sbjct: 179 LRGIHAHLASGLAAAEQLRLAARIVDWSAELAARHGLAFDEVNVGGGMAVDYADPEARFD 238 Query: 253 SSDYASLIHQYFGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + + I LEPGR L A G T+V+ +K S + F ++ + Sbjct: 239 WPAFGRGLAELLDRRPGLTIRLEPGRALTAYCGWYATEVLDVKHSHGEDFAVVRGGTHHL 298 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHI-------HADIVGPICETGDFIALNRKIALPRPGD 364 P + P + G +C D +A + R GD Sbjct: 299 RTPATRGHTQPFTVLPVPHWPHPWPRPAVTAAPVTVCGQLCTPKDVLASGVVVPELRAGD 358 Query: 365 LLYIEKTGAYGAVQSGT-YNSRLLIP 389 L GAY S + Sbjct: 359 RLLFAMAGAYAWNISHHEFLMHPRPA 384 >gi|302842658|ref|XP_002952872.1| hypothetical protein VOLCADRAFT_63034 [Volvox carteri f. nagariensis] gi|300261912|gb|EFJ46122.1| hypothetical protein VOLCADRAFT_63034 [Volvox carteri f. nagariensis] Length = 380 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 72/367 (19%), Positives = 128/367 (34%), Gaps = 30/367 (8%) Query: 51 MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDE 110 + YA+K A++K L LG+G D S+GEL L RI+F+ K + Sbjct: 3 PRVLPYYAVKCYPEPAILKLLMALGAGFDCASKGELDMMLRMGASPARIIFAHPCKRSCD 62 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 A + GI ++ SEL + + I + K Sbjct: 63 FRFAREHGIQYTTFDTVSELHKIAEMDPEFKLVLRIR----------ADDPGARVPLGLK 112 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 +G + + +L A L ++ GV H+GS + +F A + R + + S G+ Sbjct: 113 YGAEVSEAPALLRAARELA-LECCGVSFHVGSAAKNLATFTNAIENARKVFDEAASLGYR 171 Query: 231 IQHIDVGGGLGIAYHSDHRPPS-------SSDYASLIHQYFGNLQCKIILEPGRFLVADV 283 + +D+GGG + ++ A ++I EPGR+ Sbjct: 172 MDLLDIGGGFTGHFDEMGNVMFGEIANTINAALAKYFPPGGDLGDVRVIAEPGRYFAETS 231 Query: 284 GILVTKVISIKKS-----ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH- 337 L+T VI + + L + +YD + ++ I Sbjct: 232 STLLTPVIGQRDRVAKDGSIHKDYWLTDGLYGSFNCIVYDGQNPEFRVIRSPIQPEPIDT 291 Query: 338 ----ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS--RLLIPEI 391 + + GP C++ D + + + R GD L GAY + +N ++ Sbjct: 292 RSYVSTLWGPTCDSADVVYKDVALPALRNGDWLLWPNAGAYTVAGACDFNGIEFTHPCKV 351 Query: 392 MVNGSQF 398 V Sbjct: 352 YVWSDSV 358 >gi|291527854|emb|CBK93440.1| carboxynorspermidine decarboxylase [Eubacterium rectale M104/1] Length = 383 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 66/390 (16%), Positives = 115/390 (29%), Gaps = 15/390 (3%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + ++TP Y + +N L + + A KA S + SG Sbjct: 3 INELRTPCYVIDEGKLTENLLILNGVMQRTGARILLAQKAFSAFYEYPLIGRYLSGTTAS 62 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E R A + E VF + +L FN S+ L Sbjct: 63 GLFEARLAHE-EMGKENHVFCPAFLPQEMDELVEICDHIVFNSISQYLLHRDKIEKAHKK 121 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + + GI + L ++ Sbjct: 122 ISVGLRINPECSTQEGH-EIYDPCAPGSRLGITREALDKAIKNGLDLSRIEGFHFHTLCE 180 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E+ A + ++ + ++ +++GGG I I Sbjct: 181 QDSDALETTLAAVE------EKFADLLYGLKWLNMGGGHHITRAD----YDIERLEKCIM 230 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 +I LEPG + D G L T V+ I ++ +ILD + M L Y Sbjct: 231 HMRDKYDLEIYLEPGEAVALDAGYLETTVLDIVENNGIKILILDTSAACHMPDVLEMPYR 290 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 G++ + C GD I + GD L Y V++ T Sbjct: 291 PPLMDSGEPGEK-KYTYRLSSCTCLAGDVIGDYSFDREIKTGDRLCFCDMAIYSMVKNNT 349 Query: 382 YNSRLLI-PEIMVNGSQFHIIRPRMTFQEL 410 +N L +M + +IR +++ Sbjct: 350 FNGMPLPDIAVMDENNDCKVIRRFE-YEDF 378 >gi|114777232|ref|ZP_01452243.1| Carboxynorspermidine decarboxylase [Mariprofundus ferrooxydans PV-1] gi|114552377|gb|EAU54860.1| Carboxynorspermidine decarboxylase [Mariprofundus ferrooxydans PV-1] Length = 377 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 63/394 (15%), Positives = 125/394 (31%), Gaps = 25/394 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P Y + N + + ALK S + + G S Sbjct: 7 RVPSPCYVLEEDKLVGNLKLLKRVQEQSGCKIILALKGYSMWSTFDLIKQYLPGCTASSL 66 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 EL+ + E ++S + + ++ +G FN ++ + A + Sbjct: 67 YELKLSDE-KFGGENHIYSAAFRDDEFDEICSMAGHLVFNSVNQWQRFGAKAVAAGVSCG 125 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + ++ T F + + + + L G++ + Sbjct: 126 IRVNP---------GIAEVETDLYNPCFSGSRLGVRPEHLHGADLAGIEGMHAHALCENL 176 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 D + AF+ + ++ ++ GGG I + + I ++ Sbjct: 177 ADSSVTLIDAFE------ARFADYIPALKWVNFGGGHLITHKD----YDADKLIRRIREF 226 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG + G L+ V+ I + ILD++ M L Y Sbjct: 227 KAKWDVEVYLEPGGAIGWRTGPLIASVLDIVPTDGLPVAILDISATAHMPDVLEMPYRPA 286 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 A ++ H + G C GD I + G L E Y V++ +N Sbjct: 287 VTGSGGANEKPH-TYRLGGTSCLAGDVIGDYSFDEPLQAGTRLVFEDMIHYTMVKTTMFN 345 Query: 384 SRLLIPE-IMVNGSQFHIIRPRMTFQELIELDSI 416 I + F ++R R T+++ D + Sbjct: 346 GVRHPDIGIWHSNDSFELVR-RFTYEDF--RDRL 376 >gi|321254369|ref|XP_003193051.1| ornithine decarboxylase [Cryptococcus gattii WM276] gi|317459520|gb|ADV21264.1| ornithine decarboxylase, putative [Cryptococcus gattii WM276] Length = 527 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 77/438 (17%), Positives = 149/438 (34%), Gaps = 70/438 (15%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 V +++ A F+ +A+ + + + G + YA+K N + AV+ L+ + Sbjct: 98 GVDIDESA------FFAADLSAVYQAVQMWRASPIGSRVEIFYAVKCNPSPAVLHLLSLM 151 Query: 75 GSGLDIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G+ D S E+ + L+ P +RI+F+ K I A Q G+ ++ EL Sbjct: 152 GTSFDCASSSEINQVLSLPSAPSGDRIIFANPCKPASFIRTAAQRGVSMMTFDNVDELYK 211 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + + + + T S + KFG P+ L A L + Sbjct: 212 VKRICPNAKLVLRML----------TDDSKSLCRLGLKFGAPVDSCPGLLKVARQLG-LN 260 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + GV H+GS F A R + + G++ +D+GGG ++ Sbjct: 261 VVGVSFHVGSGCKDPMQFADAVWRARKVFDMGKEAGYDFDLLDIGGGFERETFAEMTQVL 320 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT------------ 300 + + + +II EPGRFLV+ L T +I+ +++ Sbjct: 321 KDSF---DLYFPEDSGVRIIAEPGRFLVSSAFTLATSIIASRRAPKAEASQQAQAATQED 377 Query: 301 ------FVILDVAMNDFMRPTLYDAYHEINYIVNPAGD---------------------- 332 ++ + ++D + + Sbjct: 378 TKSADVMYYINDGVYGSFNCIMFDHQIVHPHPLTIGHKLATAAPPFPPPPNVQLEVDLPV 437 Query: 333 ----RLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 + + GP C++ D + + GD + + GAY + T+N Sbjct: 438 QMGYKDVEKVSVWGPTCDSIDCVRQLVDLPKGMDVGDWIGWGEMGAYTLCAASTFNGFDR 497 Query: 388 IPEIMVNGS---QFHIIR 402 P + G ++R Sbjct: 498 SPVLWTTGGDTEDARVVR 515 >gi|320528632|ref|ZP_08029785.1| pyridoxal-dependent decarboxylase, sheet domain protein [Solobacterium moorei F0204] gi|320130998|gb|EFW23575.1| pyridoxal-dependent decarboxylase, sheet domain protein [Solobacterium moorei F0204] Length = 392 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 81/393 (20%), Positives = 155/393 (39%), Gaps = 24/393 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L+ +A QTP + + A+++ G +CY++KAN +I T+A + Sbjct: 6 LKYIAEHYQTPCFIFDLEAVKERVKKMREIVGGA-YQLCYSIKANP--FLIPTMAEITDK 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 L++ S GEL A V +I++SGV KT ++ A++ G+ + ES + +NQ A Sbjct: 63 LEVCSPGELSICKALRVEPTKILYSGVNKTEVDVTDAMEYGVIHYTAESLLHMDIVNQVA 122 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 KK I R+N +FG+ + S+YA V + G+ Sbjct: 123 GKYQKKVEILPRLNAGS---------------QFGMSKEDLFSIYANEEKYSNVIVKGIH 167 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN---IQHIDVGGGLGIAYHSDHRPPSSS 254 G+Q + + K +L +L +++++ + G + + D Sbjct: 168 YFAGTQRKKNDKQIKELDVLLELIKEIQTTFNRKVEQIEYGPGLSVPLFEGDDFSDTLKP 227 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + +E GRF G +T+ + K + + I+D MN Sbjct: 228 LENIHEKLKELSGVVDLTIEMGRFYSTFCGTYLTRAMDCKSNEGVNYCIVDGGMNHLNYY 287 Query: 315 -TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + ++ +R+ + + G +C T D + + + + GD L GA Sbjct: 288 GQMMGMKVPHIQHLHACDNRIEKNWCLCGSLCTTADVLVRDVTLQGLQEGDYLAFNNCGA 347 Query: 374 YGAVQSGT-YNSRLLIPEIMVNGSQFHIIRPRM 405 Y + + SR + I++ ++ I R Sbjct: 348 YSVTEGIHLFLSRTMP-LILLRTAENKYIVARQ 379 >gi|255956161|ref|XP_002568833.1| Pc21g18390 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590544|emb|CAP96736.1| Pc21g18390 [Penicillium chrysogenum Wisconsin 54-1255] Length = 429 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 80/379 (21%), Positives = 130/379 (34%), Gaps = 40/379 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I + + ++ + G+ YA+K N + +K LA LG+G D S E+R Sbjct: 52 FFIADLGQIIRQHRRWTQSVPGI--RPHYAVKCNRDPTFLKVLAELGTGFDCASIEEMRA 109 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ V RI+F+ K + A + G+ ++ EL + I Sbjct: 110 VLSLGVDPARILFANPCKAPAAVAFAREVGVLRTTFDNIDELDAIKIHMPEAQLLLRIY- 168 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + + + +KFG + L + A L + + GV H+G+ Sbjct: 169 ---------ANDEGAFICLGEKFGAQLDTTEELLSRAWELG-LNMIGVSFHVGTGATNPA 218 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 SF K K R Q G + + +D+GGG P S Sbjct: 219 SFCKGIKDARLAFSQAERLGFHPKILDIGGGFQDDCFESMAPVIRDAIRS-----EFPAG 273 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKS---------ADKTFVILDVAMNDFMRPTLYDA 319 I EPGRF V LV +VIS ++ D + + N + Sbjct: 274 ITTIAEPGRFFARSVYTLVCRVISRRRQLGSAALSGVPDMLYQNDGIYGNFMNVIMEKEI 333 Query: 320 YHEINYIVNPAGDRLHIH------------ADIVGPICETGDFIALNRKI-ALPRPGDLL 366 A LH I GP C++ D + + + GD L Sbjct: 334 MVPYLVKNKKARVLLHKPKSEDALQVTDHRYSIWGPTCDSTDCVVREVTFDSEVKVGDWL 393 Query: 367 YIEKTGAYGAVQSGTYNSR 385 + GAY + + +N Sbjct: 394 KYKNMGAYTSTTATQFNGF 412 >gi|167755031|ref|ZP_02427158.1| hypothetical protein CLORAM_00535 [Clostridium ramosum DSM 1402] gi|167705081|gb|EDS19660.1| hypothetical protein CLORAM_00535 [Clostridium ramosum DSM 1402] Length = 369 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 121/377 (32%), Gaps = 21/377 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y +EKN + + A K S +V +A G E Sbjct: 3 TPYYLIDEQLLEKNLKILYTVKERTGCKILLAQKCFSMFSVYPLIAEYLDGTTASGLYEA 62 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + + E VFS + + ++ FN ++ + + S I Sbjct: 63 KLGYE-EMHKENHVFSTAYRDDEIEEIMNICDHVVFNSFNQWQKYQNLAKQTSTSCGIRI 121 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + I + + + + L G++ D Sbjct: 122 NPECSTQIGHEIYDPCAKFSRMGVTLENFKEEL--------LEGIEGLHFHTLCEQNSDD 173 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + + +A + ++ ++ ++ GGG +H + +I++ Sbjct: 174 LITTIRAVE------EKFGKYLGQMKWLNFGGG----HHITRKDYDLEKLIKIINEIKEK 223 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 Q ++ LEPG + + G LV+ V+ I + ++ A + + + I Sbjct: 224 YQVQVYLEPGEAVALNAGFLVSSVLDIIHNGMAIAIMDTSAACHMP--DVLEMPYRPEII 281 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + + + GP C GD I + G L+ + Y V++ T+N Sbjct: 282 DSALPNVKTYTYRLGGPTCLAGDIIGDYSFDQPLQVGQQLWFKDMAIYSMVKNNTFNGMN 341 Query: 387 LIPEIMVNGSQFHIIRP 403 L ++ + II+ Sbjct: 342 LPSIVLKQKEKLKIIKE 358 >gi|34556614|ref|NP_906429.1| carboxynorspermidine decarboxylase (nspC) [Wolinella succinogenes DSM 1740] gi|34482328|emb|CAE09329.1| CARBOXYNORSPERMIDINE DECARBOXYLASE (NSPC) [Wolinella succinogenes] Length = 379 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 51/376 (13%), Positives = 107/376 (28%), Gaps = 19/376 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + N + ALK + ++ G+ E Sbjct: 8 PTPCYVLEEAKLRANLEILDRVQRESGAKILLALKGFALWKSFPLVSSYLKGITASGLHE 67 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + E V+S K + +L + FN + + + + + Sbjct: 68 AKLGKEEFRGGEVHVYSPAFKEPEIKELITFADHIIFNSPT--QWARFKDQVKNAPRPIE 125 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP + + + GIP ++ + Sbjct: 126 CGLRLNPLYSEVEPPIYNPCIPGSRLGIPPSELSQEALEGID-----------GLHFHTH 174 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 ++ + L + ++ ++ GGG I ++ Sbjct: 175 CEQNSDALERTLEHFERHFGELLGRMKWVNFGGGHHITRADYDVDRLIQIIQEFRKRHNN 234 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + LEPG + G L+ +V+ + ++ + + P + + Sbjct: 235 I---PVYLEPGEAVGWQSGFLLGEVVDVVRNG--MEIAILDISAAAHMPDCLEMPYRPMV 289 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + GP C GD I + + GD L E Y V++ T+N Sbjct: 290 RGSAEAGEKRYSYRLGGPTCLAGDVIGDYSFDSPLKVGDQLIFEDMIHYTIVKNNTFNGV 349 Query: 386 LLIPE-IMVNGSQFHI 400 L ++ +F + Sbjct: 350 PLPSIGVIRESGEFEL 365 >gi|239981809|ref|ZP_04704333.1| lysine/ornithine decarboxylase [Streptomyces albus J1074] gi|291453668|ref|ZP_06593058.1| lysine/ornithine decarboxylase [Streptomyces albus J1074] gi|291356617|gb|EFE83519.1| lysine/ornithine decarboxylase [Streptomyces albus J1074] Length = 472 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 95/390 (24%), Positives = 153/390 (39%), Gaps = 33/390 (8%) Query: 49 DGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTI 108 G + +A+KA V++ LA G G ++ S GEL A AA +P ERIV KT Sbjct: 74 PGTPVLHAFAVKATPLVPVLRLLAEAGLGAEVASPGELALATAAGIPPERIVLDSPAKTP 133 Query: 109 DEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 EI AL+ G+ N ++ EL+ L+ +P+ RVNP + + +ST Sbjct: 134 AEIREALRLGVA-LNADNPQELERLDAILDGATPSSPVGVRVNPQVGGGSIGALSTATPT 192 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN- 227 KFG+ + + + +H S + A L N Sbjct: 193 SKFGVALR-DPGARDWVLGAYAARPWLTRLHAHSGSQGMPLELLAEGLGALYDLAEEINE 251 Query: 228 ---GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF---GNLQCKIILEPGRFLVA 281 I +D+GGGL + +HSD PS + YA+L+ + + + ++ E GR ++A Sbjct: 252 AAGRKQIDTLDIGGGLPVNFHSDADDPSHAAYAALLRKTVPGLFDGRYGLVTEFGRSVLA 311 Query: 282 DVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL----HIH 337 G ++ +V K + ++ + + R + A R + Sbjct: 312 KHGTVLARVEYTKSAGERPIAVTHAGVQVATRTVYNPESWPLRIAAFDAEGRPRTGDTVV 371 Query: 338 ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI--------- 388 D+ GP C GD +A + + PGD TGAY YNS Sbjct: 372 QDVAGPACFAGDLLATGQTMPRLHPGDWAAALDTGAYYFAHHYAYNSLPRPAVHGWTERP 431 Query: 389 ------PEIMVNGSQFHIIRPRMTFQELIE 412 PE+ +F +RP T E++ Sbjct: 432 GAAGEEPEV-----RFATVRPAQTVAEIVA 456 >gi|126138518|ref|XP_001385782.1| ornithine decarboxylase [Scheffersomyces stipitis CBS 6054] gi|126093060|gb|ABN67753.1| ornithine decarboxylase [Scheffersomyces stipitis CBS 6054] Length = 458 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 83/407 (20%), Positives = 146/407 (35%), Gaps = 55/407 (13%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + +++ + YA+K N+N VIK LA LG D S+ E+ Sbjct: 66 FFVCDLGEVYRSFGVWQQKLPQ--VQPHYAVKCNTNLEVIKLLASLGVNFDCASKNEIDT 123 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L + +RIV++ KT I A ++ + V++ EL L + G +A Sbjct: 124 ILNLGISPDRIVYANPCKTNSFIRHASKANVNLTTVDNAQELHKLKKFHPDCGILIRLA- 182 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + + KFG + + + G+ + GV H+GS + Sbjct: 183 ---------TDDETAQCRLSTKFGCTLSAAINELLPLAKELGLNVRGVAFHVGSGAKDFD 233 Query: 209 SFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSSDYA-SLIHQYFGN 266 S +KA + RD+ + + + +D+GGG + + S + Sbjct: 234 SIYKAIRDSRDVFNRAITEYGFEMSILDIGGGFELETFDESSSMVCSSLNKFFPADFVSQ 293 Query: 267 LQCKIILEPGRFLVADVGILVTK--------------------VISIKKSADKTFVILDV 306 K I EPGRF+V++ L V ++ D + ++ Sbjct: 294 NGIKFIAEPGRFMVSNAFTLAAHIIARRDLDLKATFVSEEDKQVSAMVYINDGVYGNMNC 353 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRL-----------HIHADIVGPICETGDFIALNR 355 + D P + H+ + + + H I GP C+ D +A Sbjct: 354 ILFDHQNPQAHVLQHKNKFFYHQDEESDDQKLIDDDAKGEHHFSIWGPTCDGLDCVASKC 413 Query: 356 KIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHII 401 ++ GD LY GAY + + +N G HII Sbjct: 414 TLSHDVEVGDWLYFPNLGAYTSAATTAFNGL---------GGNSHII 451 >gi|119627882|gb|EAX07477.1| arginine decarboxylase, isoform CRA_i [Homo sapiens] Length = 392 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 74/371 (19%), Positives = 130/371 (35%), Gaps = 30/371 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 18 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 75 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 +PA +I+ + K I +I A + GI + ++E EL + + S IA Sbjct: 76 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIA- 134 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG+ + L A V++ GV HIGS + Sbjct: 135 ---------TDDSHSLSCLSLKFGVSLKSCRHLLENAKKH-HVEVVGVSFHIGSGCPDPQ 184 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 185 AYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEG 244 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 I E GR+ V + +I+ K S + + + F Sbjct: 245 CGVDIFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIF 304 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P+ ++ + + GP + D +A + GD L + Sbjct: 305 NSVLFDNICPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNM 364 Query: 372 GAYGAVQSGTY 382 GAY + Sbjct: 365 GAYTVGMGSPF 375 >gi|328544617|ref|YP_004304726.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [polymorphum gilvum SL003B-26A1] gi|326414359|gb|ADZ71422.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Polymorphum gilvum SL003B-26A1] Length = 376 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 89/361 (24%), Positives = 142/361 (39%), Gaps = 20/361 (5%) Query: 40 NYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERI 99 NY F+ A DT V YA+KAN ++ LA LGS D S GE+ LAA AERI Sbjct: 29 NYEAFARALP--DTSVYYAVKANPAPEILSLLAELGSSFDCASVGEIEMVLAAGAGAERI 86 Query: 100 VFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTH 159 + K +I A + G+ F V+S++E+ + + A I + A Sbjct: 87 SYGNTIKKERDIARAFELGVRLFAVDSDAEVDKIARAAPGSKVFCRILCD---GVGAE-- 141 Query: 160 KKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD 219 KFG + A V GV H+GSQ + ++ A Sbjct: 142 -----WPLSKKFGCVPEMAPDVLEQAHRSGLV-AHGVSFHVGSQQANLGAWDNALATAAA 195 Query: 220 LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH--QYFGNLQCKIILEPGR 277 + ++ G ++ +++GGG Y D + A +FGN + I+EPGR Sbjct: 196 VFRETARRGIELKMVNMGGGFPARYLKDVPGVPAYGQAIFQALSDHFGNRLPETIIEPGR 255 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR-LHI 336 +V D G++ +V+ I + + V I Y + A D Sbjct: 256 GMVGDAGLIEAEVVLISRKSADDAVRWVYLDIGKFHGLAETMDEAIRYPIRTARDGDETA 315 Query: 337 HADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIM 392 + GP C++ D + ++ + GD + IE GAY S +N + + Sbjct: 316 PCVLAGPTCDSVDVLYEKTPYELPVSLSIGDKVLIEACGAYTTTYSTVGFNGFAPLASYV 375 Query: 393 V 393 + Sbjct: 376 I 376 >gi|162147147|ref|YP_001601608.1| ornithine decarboxylase [Gluconacetobacter diazotrophicus PAl 5] gi|161785724|emb|CAP55295.1| putative ornithine decarboxylase [Gluconacetobacter diazotrophicus PAl 5] Length = 441 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 142/373 (38%), Gaps = 21/373 (5%) Query: 21 LAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA TP +E Y + A + YA+KAN A+++ L LGS D Sbjct: 74 LAEQAPATPCLVVDVDRVEARYQSLRAALPL--ARIYYAVKANPAPAILRRLVSLGSAFD 131 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S E+R LAA I F K I A Q+G+ F +S EL+ L + A Sbjct: 132 AASWEEIRLCLAAGAAGADISFGNTVKKASAIAQAHQAGVTMFAFDSIEELEKLARHAPG 191 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + KFG + L A + + G+ H Sbjct: 192 SRVYCRLIVENEGA----------EWPLSRKFGTTLDSARDLMLRARDMG-LDPYGLSFH 240 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA-- 257 +GSQ +++ A + L L + G N++ +++GGG I Y D A Sbjct: 241 VGSQQTSTDAYEAAIARVGMLFTDLAAAGLNLRMVNLGGGFPIRYREDVPEIDRFAVAIS 300 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + ++FGN ++I+EPGRF+V D G++ ++V+ + + + Sbjct: 301 HAMTEHFGNDLPEMIVEPGRFIVGDAGVVSSEVVLVTRRGQQDGPRWVYLDIGRFGGLAE 360 Query: 318 DAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGA 373 I Y + D I GP C+ D + + L GD + + TGA Sbjct: 361 TEGESIRYGIRTPHDGSPAGRVAIAGPTCDGADIMYEKAPYALPLDLACGDRIELLSTGA 420 Query: 374 YGAVQ-SGTYNSR 385 Y + S ++N Sbjct: 421 YVSTYCSTSFNGF 433 >gi|332991869|gb|AEF01924.1| carboxynorspermidine decarboxylase [Alteromonas sp. SN2] Length = 376 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 69/394 (17%), Positives = 125/394 (31%), Gaps = 28/394 (7%) Query: 20 KLAHV--VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L + +P Y + +N D + ALK S + + G Sbjct: 3 DLTQRTDIPSPCYVLEEEKLIRNLELMKRVQDESGVRIILALKGFSMWSSFDIIKPYLHG 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 S E + A A + E +S K D +LA FN S+ + Sbjct: 63 ATASSVWEAKLA--AEMGKEVHAYSPAYKKADIEELATLVNHLSFNSLSQWQTHK----- 115 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 ++ + + P L S L GV +SG+D Sbjct: 116 -----------DALAGVSLGLRINPEHQEADTPLYDPAAPGSRLGLRVSELEGVGLSGID 164 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + +SF + L+ + + ++ +++GGG + Sbjct: 165 GFHCHNLCECDSFA-TERTLKAIEARFGDYLGQLKWLNLGGGHLMTSEGYDVDHLIKTL- 222 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 +ILEPG + G L+ +V+ + + ILD++ M L Sbjct: 223 --SDFKQRYPHLDVILEPGSAVAWQTGPLIAEVVDVVNNDG-DIAILDISATAHMPDVLE 279 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 Y G++ + G C GD I A + GD + E Y V Sbjct: 280 MPYRPTILNAALPGEKA-YDYRLGGNSCLAGDVIDTYSFDAPLKAGDRVQFEDMMHYTMV 338 Query: 378 QSGTYNSRLLIPE-IMVNGSQFHIIRPRMTFQEL 410 ++ +N I+ +F I+R ++++ Sbjct: 339 KTSFFNGVEHPAIGILRKNGEFEIVRQ-FSYEDF 371 >gi|118593254|ref|ZP_01550639.1| ornithine decarboxylase [Stappia aggregata IAM 12614] gi|118434145|gb|EAV40801.1| ornithine decarboxylase [Stappia aggregata IAM 12614] Length = 376 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 84/369 (22%), Positives = 142/369 (38%), Gaps = 20/369 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + N+ F+ + DT V YA+KAN ++ L LGS D S GE+ Sbjct: 17 PCVVVDLDIVRDNFEAFAKSLP--DTSVYYAVKANPAPEILSLLESLGSSFDCASVGEIE 74 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 LA A+RI + K +I A Q G+ F V+ E++ + + A + Sbjct: 75 MVLATGASADRISYGNTIKKEKDIARAYQYGVRLFAVDCVEEVEKIARVAPGSKVFCRVL 134 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + A KFG + +A L V GV H+GSQ + Sbjct: 135 CD---GVGAE-------WPLSRKFGCDPEMAPDVLEHAHRLGLV-AHGVSFHVGSQQANL 183 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFG 265 ++ A + + Q++ G ++ +++GGG Y D S+ + ++FG Sbjct: 184 TAWDLALAMAAGVFQEMALRGIELKMVNMGGGFPTRYLKDVPGVSTYGEAIFQALCKHFG 243 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N I+EPGR +V + G++ +V+ I + + V I Y Sbjct: 244 NRLPSTIIEPGRGMVGNAGMIEAEVVLISRKSANDDVRWVYLDIGKFHGLAETMDEAIRY 303 Query: 326 IVNPAGDRL-HIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSG- 380 + D + GP C++ D + ++ + GD + IE GAY S Sbjct: 304 PIRTPRDGDITAPCVLAGPTCDSVDVLYEKTPYELPVSLSIGDKVLIEACGAYTTTYSTV 363 Query: 381 TYNSRLLIP 389 +N + Sbjct: 364 GFNGFAPLA 372 >gi|319891631|ref|YP_004148506.1| Siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus pseudintermedius HKU10-03] gi|317161327|gb|ADV04870.1| Siderophore staphylobactin biosynthesis protein SbnH [Staphylococcus pseudintermedius HKU10-03] Length = 400 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 87/371 (23%), Positives = 147/371 (39%), Gaps = 15/371 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 + Y + ++ T ++ + + YA+KANS ++ + +G ++ SEGE+ +A Sbjct: 20 FIYDMDGLRQHLETVTSQLPD-NCEMYYAMKANSESEILAAIQPHVAGFEVASEGEIAKA 78 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L AE ++F G GKT + + A+Q GI +VES EL+ LN I R Sbjct: 79 L-VHTTAEHVIFGGPGKTDESLRYAIQQGIRRIHVESLYELERLNALLKQENATMSILLR 137 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN G+ +FGI ++ ++ A A +P +++ G H S Sbjct: 138 VNLAGPFPAATLHMAGQP-TQFGIDETEVDTVIATAQNMPRIQLEGFHFHSISNNLDAAL 196 Query: 210 FHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + L + + +QH++VGGG+G+ Y + + + + + Sbjct: 197 HLQVMTLYFQKAKAWAAQHDFTLQHLNVGGGIGVNYADLNEQFDWTYFTTELSALIEEEG 256 Query: 269 CKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + I E GR++VA +G VT+V+ IK+ F IL F P + H Sbjct: 257 LQNITINFECGRYMVAHIGYYVTEVLDIKRVHGAWFAILKGGTQHFRLPVSWQHNHPFEI 316 Query: 326 -------IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 VG +C D A ++ GD + GAYG Sbjct: 317 LPLGEQANQIAPRTIEQQAVTFVGQLCTPKDVFAKAVELLALSTGDAVIFIYAGAYGWSI 376 Query: 379 SGT-YNSRLLI 388 S + S Sbjct: 377 SHHDFLSHPHP 387 >gi|226290836|gb|ACO40487.1| ornithine decarboxylase [Grateloupia imbricata] Length = 420 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 69/362 (19%), Positives = 126/362 (34%), Gaps = 28/362 (7%) Query: 41 YLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIV 100 F+ YA+K N + +++ LA+LG G D S E+ L V AE IV Sbjct: 15 LQAFTEKMPR--VRPFYAVKCNPDPVMLRVLANLGCGFDCASAKEMATVLDMGVEAESIV 72 Query: 101 FSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHK 160 F+ K +++ A+++ + + EL+ + I Sbjct: 73 FAHPCKRPLDLEFAIETNVTRMTFDCVDELEKVAAECPHAELVLRIR----------ADD 122 Query: 161 KISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL 220 + + K+G + A+ + + GV H+GS +++ A + R + Sbjct: 123 PSAVVQFGHKYGADPQTEAPMLLAAAKQLEMNVVGVSFHVGSGSQSCDAYPLAVEAARRV 182 Query: 221 TQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP-------SSSDYASLIHQYFGNLQCKIIL 273 Q G+ +Q +D+GGG + + P +S + ++I Sbjct: 183 FDQAADLGYEMQLLDLGGGFWGRFDATGHVPLEDVSEAINSALDRFFPVNSSGRKVEVIA 242 Query: 274 EPGRFLVADVGILVTKVISIKKSA-DKTFVILDVAMNDFMRPTLYDA--------YHEIN 324 EPGR+ + V ++K + + +YD Sbjct: 243 EPGRYFAEACTTMYALVTTVKDRPDGSRSYYITDGVYGSFNNLVYDHGSVTAKVLRGPGM 302 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 V P + + + GP C+ D I + + L R GD L GAY + +N Sbjct: 303 PPVQPVETETRLPSTVFGPTCDGVDLIFKDVPMPLLRRGDWLQFPNFGAYTIAGACAFNG 362 Query: 385 RL 386 Sbjct: 363 IP 364 >gi|160873608|ref|YP_001552924.1| diaminopimelate decarboxylase [Shewanella baltica OS195] gi|160859130|gb|ABX47664.1| Diaminopimelate decarboxylase [Shewanella baltica OS195] gi|315265837|gb|ADT92690.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica OS678] Length = 391 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 85/378 (22%), Positives = 145/378 (38%), Gaps = 19/378 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +E A TPF T+ I K Y N+F + V YA+KAN ++ L GS Sbjct: 20 RIEAFAKDKATPFVVIDTSIIAKQYDDMVNSFPYAN--VYYAVKANPAAEILSLLKDKGS 77 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI S EL + V +R+ + K ++ + G+ + +SE++L+ + + Sbjct: 78 NFDIASIYELDMVMNVGVTTDRVSYGNTIKKRQDVRAFYERGVRMYASDSEADLRMIAEE 137 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A I + KFG + L A L ++ G+ Sbjct: 138 APGSRIYVRILTEGTDTAD---------WPLSRKFGCQNEMAYELLVLAQELG-LEPFGI 187 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIAYHSDHRPPSSS- 254 H+GSQ I ++ A ++ + +LR + ++ I++GGG Y Sbjct: 188 SFHVGSQQRDIGAWDSAIGKVKSIFDRLRDEHNITLKMINMGGGFPANYIDKTNQLGVYA 247 Query: 255 -DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + FG+ +IILEPGR L+++ GILV++V+ I K + Sbjct: 248 EQITHFLKEDFGDDLPQIILEPGRSLISNAGILVSEVVLISKKSYTALERWVFTDVGKFS 307 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IA-LPRPGDLLYIEK 370 + I + + I GP C++ D + + + GD +Y Sbjct: 308 GLIETMDEAIKFPIYTDRQGELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLT 367 Query: 371 TGAYGAVQSGT-YNSRLL 387 GAY S +N Sbjct: 368 AGAYTTTYSAVCFNGFPP 385 >gi|114564566|ref|YP_752080.1| diaminopimelate decarboxylase [Shewanella frigidimarina NCIMB 400] gi|114335859|gb|ABI73241.1| ornithine decarboxylase [Shewanella frigidimarina NCIMB 400] Length = 391 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 87/400 (21%), Positives = 154/400 (38%), Gaps = 28/400 (7%) Query: 1 MSAFK------YFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM 54 MS F+ Y++ + +E A TPF T + K Y N F + Sbjct: 1 MSQFQSIDVADYYDKD-TFD--RIEAFAKDKPTPFVVIDTQIVAKQYDDMVNNFPFAN-- 55 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 + YA+KAN + ++ L GS DI S EL + V A+RI + K ++ Sbjct: 56 IYYAVKANPAKEILTLLRDKGSNFDIASIYELEMVTSIGVSADRISYGNTIKKRVDVRSF 115 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 + G+ F +SE++L+ + + A I + KFG Sbjct: 116 FEQGVRMFASDSEADLRMIAEEAPGSKVYLRIL---------TEGTHTADWPLSRKFGCQ 166 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQH 233 + L A L ++ G+ H+GSQ I ++ A ++ + +L+ ++ Sbjct: 167 NEMAYDLLVLAKELG-LQPHGISFHVGSQQRDIGAWDSAIGKVKSIYDRLKEEHGIVLKM 225 Query: 234 IDVGGGLGIAYHSDHRPP--SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 I++GGG Y + + + FG+ +IILEPGR L+++ G+LV++V+ Sbjct: 226 INLGGGFPANYMDKTNELGVYAQQIKHFLEEDFGDELPEIILEPGRSLLSNAGVLVSEVV 285 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 I + ++ + I + + I GP C++ D + Sbjct: 286 LISRKSNTALERWVFTDVGKFSGLIETMDEAIKFPIYTERKGELDKCVIAGPTCDSADIM 345 Query: 352 ALNRK--IA-LPRPGDLLYIEKTGAYGAVQSGT-YNSRLL 387 + + GD +Y GAY S +N Sbjct: 346 YEHYSYGLPVDLAIGDRMYWLTAGAYTTTYSAVCFNGFPP 385 >gi|119627875|gb|EAX07470.1| arginine decarboxylase, isoform CRA_b [Homo sapiens] Length = 437 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 74/371 (19%), Positives = 130/371 (35%), Gaps = 30/371 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 18 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 75 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 +PA +I+ + K I +I A + GI + ++E EL + + S IA Sbjct: 76 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIA- 134 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG+ + L A V++ GV HIGS + Sbjct: 135 ---------TDDSHSLSCLSLKFGVSLKSCRHLLENAKKH-HVEVVGVSFHIGSGCPDPQ 184 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 185 AYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEG 244 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 I E GR+ V + +I+ K S + + + F Sbjct: 245 CGVDIFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIF 304 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P+ ++ + + GP + D +A + GD L + Sbjct: 305 NSVLFDNICPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNM 364 Query: 372 GAYGAVQSGTY 382 GAY + Sbjct: 365 GAYTVGMGSPF 375 >gi|291524108|emb|CBK89695.1| carboxynorspermidine decarboxylase [Eubacterium rectale DSM 17629] Length = 383 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 66/390 (16%), Positives = 115/390 (29%), Gaps = 15/390 (3%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + ++TP Y + +N L + + A KA S + SG Sbjct: 3 INELRTPCYVIDEGKLTENLLILNGVMRRTGARILLAQKAFSAFYEYPLIGRYLSGTTAS 62 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E R A + E VF + +L FN S+ L Sbjct: 63 GLFEARLAHE-EMGKENHVFCPAFLPQEMDELVEICDHIVFNSVSQYLLHRDKIEKADKK 121 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + + GI + L ++ Sbjct: 122 ISVGLRINPECSTQEGH-EIYDPCAPGSRLGITRDALDKAIKNGLDLSRIEGFHFHTLCE 180 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E+ A + ++ + ++ +++GGG I I Sbjct: 181 QDSDALETTLAAVE------EKFGDLLYGLKWLNMGGGHHITRAD----YDIERLEKCIM 230 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 +I LEPG + D G L T V+ I ++ +ILD + M L Y Sbjct: 231 HMRDKYDLEIYLEPGEAVALDAGYLETTVLDIVENNGIKILILDTSAACHMPDVLEMPYR 290 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 G++ + C GD I + GD L Y V++ T Sbjct: 291 PPLMDSGEPGEK-KYTYRLSSCTCLAGDVIGDYSFDREIKTGDRLCFCDMAIYSMVKNNT 349 Query: 382 YNSRLLI-PEIMVNGSQFHIIRPRMTFQEL 410 +N L +M + +IR +++ Sbjct: 350 FNGMPLPDIAVMDENNDCKVIRRFE-YEDF 378 >gi|94502385|ref|ZP_01308844.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|94451057|gb|EAT14023.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] Length = 225 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 5/183 (2%) Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY--FGNLQCKIILEPGRFLVADVGILVTK 289 ++ID G G + YH + + KI+ EPG+FLV++ G + K Sbjct: 38 KYIDFGSGFKVPYHKNDTKTDLDMLGVFFKKKISRVCKNIKIVFEPGKFLVSESGYFIVK 97 Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 V IK + F +D N F+RP YD+YH+I+ + NP+G +VG ICE+ D Sbjct: 98 VNVIKHTTSTVFACVDSGFNHFIRPMFYDSYHQIDNLSNPSGK--LRSYTVVGYICES-D 154 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 +N KI R GD+L GAY S YNSR E+++ ++ +IR R Q+ Sbjct: 155 TFCVNIKINEIREGDILCFRNAGAYCFSMSSNYNSRYRPSEVIIYNNKSFLIRRRENMQD 214 Query: 410 LIE 412 L++ Sbjct: 215 LLK 217 >gi|18916739|dbj|BAB85531.1| KIAA1945 protein [Homo sapiens] Length = 420 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 74/371 (19%), Positives = 130/371 (35%), Gaps = 30/371 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 46 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 103 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 +PA +I+ + K I +I A + GI + ++E EL + + S IA Sbjct: 104 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIA- 162 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG+ + L A V++ GV HIGS + Sbjct: 163 ---------TDDSHSLSCLSLKFGVSLKSCRHLLENAKKH-HVEVVGVSFHIGSGCPDPQ 212 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 213 AYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEG 272 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 I E GR+ V + +I+ K S + + + F Sbjct: 273 CGVDIFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIF 332 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P+ ++ + + GP + D +A + GD L + Sbjct: 333 NSVLFDNICPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNM 392 Query: 372 GAYGAVQSGTY 382 GAY + Sbjct: 393 GAYTVGMGSPF 403 >gi|196013972|ref|XP_002116846.1| hypothetical protein TRIADDRAFT_31473 [Trichoplax adhaerens] gi|190580564|gb|EDV20646.1| hypothetical protein TRIADDRAFT_31473 [Trichoplax adhaerens] Length = 390 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 73/373 (19%), Positives = 138/373 (36%), Gaps = 25/373 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + Y T+ + + YA+K N N ++ TL LG+GLD+ S GE+ Sbjct: 12 PFYLVDISDLICKYKTWMSLLPRI--RPFYAMKCNPNFQMVATLCRLGAGLDVASAGEIE 69 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A+A + E +++S K I + +A GI +SE EL + + + + Sbjct: 70 TAVALGLKGEDVIYSNTCKGISHLKVAANEGITQMTFDSEEELHRIKRILPNARLLLRLL 129 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + K K G P ++ L+ A L + G H+GS Sbjct: 130 VD----------DSGAQWKHGIKAGAPFSRVSHLFKVAKKLGL-NLVGTSFHVGSDCGDP 178 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS-LIHQYFGN 266 ++ KA + R S G + +D+GGG + + ++ + + Sbjct: 179 SAYSKAIERCRKAFDIAVSLGMELSMLDIGGGYPGHADTLFKNVGATSINEAIDIHFPSG 238 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP-----------T 315 KII EPG++ IL +I + + V ++ + + Sbjct: 239 CGVKIISEPGKYFAMSSSILCANIIGKRLRYEDGDVQIEGVKALEVMYHISEGMGGSFLS 298 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + + + + + + GP C D + + + G+ +Y + GAY Sbjct: 299 VIATHQQYIPKKLSNNNEKCYRSSLWGPSCTATDCLLSDFNLPEMETGEWVYYDDLGAYT 358 Query: 376 AVQSGTYNSRLLI 388 + + +N Sbjct: 359 SSTATNFNGFKKA 371 >gi|322789437|gb|EFZ14734.1| hypothetical protein SINV_02675 [Solenopsis invicta] Length = 402 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 69/380 (18%), Positives = 135/380 (35%), Gaps = 18/380 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + K + + + +A+KAN + VIK LA L S D S+ E+++ Sbjct: 35 FYIADIGNVIKKHQEWITKLPR--VIPHFAIKANPDPTVIKVLAALNSCFDCASKQEIKQ 92 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V +RI+F+ K I+ A + + V+SESEL + I Sbjct: 93 VMQHGVHGDRIIFAHPTKYPSHIEYAKEVNVKQMTVDSESELFKIKDIFPEAKIIIRIRC 152 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 K I KFG ++ + G+ + G H+G + E Sbjct: 153 DA---------KYIGAKSLGLKFGTQSNEETVRLIQLTKDLGLNLYGFSFHVGCLCKEYE 203 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ + + ++L ++ G + + GG + ++ + Sbjct: 204 AYSRGIAMCKELIIASKAIGFDKVQLIDIGGGFEGKSGMNIDEVANVIN--DAIQDLDSS 261 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSAD----KTFVILDVAMNDFMRPTLYDAYHEIN 324 ++I EPG + V+ L T + S + + ++ + L + Sbjct: 262 IRVISEPGTYYVSSSFTLATYLHSKRIIPNKGEMMRMYYMNCGVFHSFIDELLGIQARLP 321 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 ++ + + I GP ++ D I + + GD L GAY + +N Sbjct: 322 QSLSEPISKEKFLSSIWGPTADSYDLIVKDAMLPEFYIGDWLIWTNMGAYSIAIACPFNG 381 Query: 385 RLLIPEI-MVNGSQFHIIRP 403 + I + SQ ++ Sbjct: 382 FPIPVVIPFIRKSQLLVLVK 401 >gi|268612016|ref|ZP_06145743.1| carboxynorspermidine decarboxylase [Ruminococcus flavefaciens FD-1] Length = 378 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 66/379 (17%), Positives = 110/379 (29%), Gaps = 22/379 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + N D + A KA S V +A SG E Sbjct: 11 PTPCYIIDEARLIHNLEILKGVEDRTGAKILLAQKAFSCYHVYPLIAEYISGTACSGLFE 70 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + + E VFS + + ++ G FN S+ + A Sbjct: 71 AKLGYE-EMGKENHVFSAAYRESEIDEIISYCGHIIFNSFSQLDRYRDRVLAAGKKVGLR 129 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I + H+ + GI A L GV D Sbjct: 130 INPEYSTQ---EGHEIYDPCSPASRLGITRRNFR-----ADDLDGVSGLHFHTLCEQNSD 181 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 +ES A + ++ ++ I+ GGG I I + Sbjct: 182 DLESTLNAIE------EKFGDILPKMEWINFGGGHHITRDD----YDIPRLERCIKRMQE 231 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + + G LVT+V+ + + + + P + + + Sbjct: 232 KYGLEVFLEPGEAVALNAGWLVTEVLDLT--ENDMPIAILDTSAACHMPDVLEMPYRPPL 289 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + + C GD I GD L Y V++ T+N Sbjct: 290 VDSGKAGEKEFTYRLGSQTCLAGDSIGEYSFDKPLNIGDRLVFGDMAIYSMVKNNTFNGM 349 Query: 386 LLIPEIMV-NGSQFHIIRP 403 L I++ F +R Sbjct: 350 PLPEIILMKKDGTFRQLRK 368 >gi|292670643|ref|ZP_06604069.1| carboxynorspermidine decarboxylase [Selenomonas noxia ATCC 43541] gi|292647809|gb|EFF65781.1| carboxynorspermidine decarboxylase [Selenomonas noxia ATCC 43541] Length = 381 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 60/388 (15%), Positives = 105/388 (27%), Gaps = 24/388 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + V TP Y +EKN + + V A K S + SG Sbjct: 14 NEVPTPSYLVYEELLEKNLKILAGIAEDTGAKVLLAQKCFSMYHYYPLIGKYLSGTTASG 73 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + + E VF + LA FN ++ RA Sbjct: 74 IYEARLSQE-EMGKENHVFKPAYDAEEIRQLAQICDHIIFNSFAQWARFGRAARAQGASC 132 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + +A + K + + Sbjct: 133 GIRINPECSTQEHAIYDPCAPGSRLGVKLADFREDLLEGIEGLHFHTLCE---------- 182 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + L + ++ H ++ ++ GGG I P Sbjct: 183 -----QGADALEVTLAAVEEKFGKYLHGMKWLNFGGGHHITREDYDIPLLKKLI----RH 233 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + LEPG + G+LV +V+ ++ + ++ P + + + Sbjct: 234 VQETYDTAVYLEPGEAAALNAGVLVAEVLEVQTGGN----VILNTSATCHMPDVIEMPYR 289 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + GP C GD I GD + Y V++ T+ Sbjct: 290 PPVVHAGEAGEKTHTYTFAGPTCLAGDTIGTYSFDTPLSVGDRVVFGDMAIYTMVKNNTF 349 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 N L I V+ S I ++ + Sbjct: 350 NGMPLPNIIAVSPSGAWEIVRAFSYDDF 377 >gi|126330252|ref|XP_001366814.1| PREDICTED: hypothetical protein isoform 2 [Monodelphis domestica] Length = 459 Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 72/390 (18%), Positives = 132/390 (33%), Gaps = 40/390 (10%) Query: 14 ENVSLEKLAHVV--QTP---------FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 E + L + P F+ + K +L F Y +K N Sbjct: 15 EGFTTRDLLEELTLGGPQVGKEKKASFFVADLGDVVKKHLRFLKNLPR--VRPFYVVKCN 72 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ V++ LA LG G ++ E+ VPA +I+++ K ++ A + GI Sbjct: 73 SSPGVLRALAELGLGFSCANKAEMELLRHIGVPAHKIIYTSPCKQAAQVKQAARLGIRML 132 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 + ++E EL + + + IA T S + K G + L Sbjct: 133 SFDNEVELAKVARSHPTARMVLRIA----------TDDSCSPARLSMKLGATLKSCRHLL 182 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A + + ++F ++ R + + G+ + +D+GGG Sbjct: 183 ETAKKMNMEVVGVSFHVGSGCSSDPQAFTQSIADARLVFEMGTELGYRMHILDLGGGFPG 242 Query: 243 AYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 S R + + + I+ EPGR+ VA L ++++ K+ Sbjct: 243 TEDSKVRFEEMASVINSALDMYFPEGCGVDILAEPGRYYVASAFTLAVRIVAKKEVPSDQ 302 Query: 301 ---------------FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 + I + F +A P+ D+ + + GP C Sbjct: 303 TGLDEEDGASPKSIVYHISEGVYGAFNCVFFDNACPMPILQKKPSPDQRVYSSSLWGPTC 362 Query: 346 ETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + D +A + + GD L E GAY Sbjct: 363 DDLDHVAEGLCLPELQLGDWLIFENMGAYT 392 >gi|85712875|ref|ZP_01043917.1| Carboxynorspermidine decarboxylase [Idiomarina baltica OS145] gi|85693339|gb|EAQ31295.1| Carboxynorspermidine decarboxylase [Idiomarina baltica OS145] Length = 380 Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 68/391 (17%), Positives = 120/391 (30%), Gaps = 24/391 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L + +P Y + N + ALK S + + G Sbjct: 8 LREDIPSPCYVLDEALLRNNLELMKRVQVESGASIILALKGYSMWSAFPLIKQYLKGCTA 67 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S E + A +E ++ K D L FN S+ E + Sbjct: 68 SSVWEAQLAAD-KFGSEVHAYAPAYKAEDIKQLLPIVNHISFNSISQWEAYADQAK---- 122 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 ++ + + + P L AS L V + V+ Sbjct: 123 ----------AAGVSVGLRVNPEHQEADTELYDPSAPGSRLGVRASELENVSLDDVEGIH 172 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + +S+ + L + + H ++ +++GGG + S + Sbjct: 173 VHNLCECDSYA-LERTLAAVENKFGDLLHQVKWLNLGGGHLMTREG----YDVDHLISQL 227 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + IILEPG + G LV +V+ I ++ +LD++ M L Y Sbjct: 228 QRLKATYNLDIILEPGSAVAWQTGPLVCEVVDIVENQGS-IALLDISATAHMPDVLEMPY 286 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 D+ + G C GD I +PGD L Y V++ Sbjct: 287 RPHIEGAGLPADKP-YRYRLGGNSCLAGDVIGEYSFDEPLKPGDRLVFADMMHYTMVKTT 345 Query: 381 TYNSRLLIPE-IMVNGSQFHIIRPRMTFQEL 410 +N I+ F IR T+++ Sbjct: 346 FFNGVQHPDIGILREDGSFERIRH-FTYEDF 375 >gi|291545481|emb|CBL18589.1| carboxynorspermidine decarboxylase [Ruminococcus sp. SR1/5] Length = 405 Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 68/384 (17%), Positives = 119/384 (30%), Gaps = 14/384 (3%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 + +L ++TP Y A+ KN N + A KA SN L Sbjct: 14 GGIIPPEL-RKIKTPCYVLDEAALIKNAELMGNIAKRTGCKMLLAQKAFSNYDCYHLLEP 72 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 +G + E R E VF + + +L + FN S +L Sbjct: 73 YLTGTEASGLYEARLGAQEMPGKEVHVFCAGYREDEFEELLSFADHIVFNSPS--QLLRF 130 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 +R GK A + + G Q + ++ Sbjct: 131 GKRVKEAGKNAGLRINPECSTQEGH-AIYDPCAPGSRMGTTRAQWETAVR-----KHPEL 184 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G+ I + L + + ++ +++GGG I Sbjct: 185 IGLLDGIHFHTLCEQDSSDLETTLTAVKTKFGDLISQMKWLNLGGGHHITRPG----YDI 240 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + I + + LEPG + G +T V+ + ++ D ILD + M Sbjct: 241 ARLEKCIRAAKEEWKVDVYLEPGEAWALNAGFFLTTVLDVLQNGDIRLAILDGSAACHMP 300 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 L Y + G+ + + GP C +GD I + GD+L Sbjct: 301 DVLEMPYRPPLLGADEPGENA-VTIRLGGPTCLSGDIIGDYSFSEPLKYGDILMFGDMAI 359 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQ 397 Y ++ T+N L + +G + Sbjct: 360 YTTCKNNTFNGMPLPDIWLRHGDK 383 >gi|242309951|ref|ZP_04809106.1| carboxynorspermidine decarboxylase NspC [Helicobacter pullorum MIT 98-5489] gi|239523248|gb|EEQ63114.1| carboxynorspermidine decarboxylase NspC [Helicobacter pullorum MIT 98-5489] Length = 403 Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 63/399 (15%), Positives = 110/399 (27%), Gaps = 24/399 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y KN + + ALK + + SG+ Sbjct: 11 KEIPSPCYVLEEEKFIKNLEILDSIQKQSGAKILLALKGYALWRSFEIAKKYLSGVTASG 70 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL--NQRAVSL 140 E + E FS K + +L S FN + + ++ Sbjct: 71 LYEAKLGYE-TFGGEITTFSPSYKKEEMQELVKISNHIIFNSFVQWQTFKPMIDEANKMR 129 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 K + RVNP + T + + + + GIP + + Sbjct: 130 ENKIEVGLRVNPLYSEVTPEIYNPCIEGSRLGIPPKEFKKGVKKYGLEGI-------SGL 182 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 ++ + L+ + +Q I+ GGG I R +I Sbjct: 183 HFHTHCEQNSDALKRTLKHFIKHFGDYIPQMQWINFGGGHHITRKDYDREL----LVKII 238 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK----------TFVILDVAMND 310 + ++ LEPG + G L+ VI I + Sbjct: 239 KNFKDKFHTEVYLEPGEAVGWQCGFLIGSVIDIVHNGVDIAILDVSAAAHMPDCLEMPYR 298 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 M Y GP C GD I + GD + E Sbjct: 299 PMVRNSYGVKAVQKNGHLKLKGEKKYSYRFGGPTCLAGDIIGDYSFREPLKIGDRIIFED 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 Y V++ T+N L M++ I ++++ Sbjct: 359 MVHYTIVKNNTFNGIPLPSIGMIDKEGKFQIFKSYSYED 397 >gi|285017513|ref|YP_003375224.1| diaminopimelate decarboxylase [Xanthomonas albilineans GPE PC73] gi|283472731|emb|CBA15236.1| hypothetical diaminopimelate decarboxylase protein [Xanthomonas albilineans] Length = 403 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 85/395 (21%), Positives = 143/395 (36%), Gaps = 13/395 (3%) Query: 11 LHAENVSL----EKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 LH + L +L P Y Y A+ + T + YA KAN+ Sbjct: 3 LHIDPTPLPAALRQLRAQADGPVCAYVYDLAALHAHASTLRTQLP-AGCELFYAAKANAE 61 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 +++TLA G + S GEL+ P ++F G GK E+ LA +V Sbjct: 62 PPLLRTLAPWVDGFEAASGGELQWLHH-HQPGRTLLFGGPGKLDAELQLATILPHCSVHV 120 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ES SEL+ L A S + + R+N ++ G + FG+ + + + Sbjct: 121 ESLSELQRLAHIAASASRLVSVFLRLNIAAPDMPDTRLVMGGRPSPFGLDLLDLDAALRL 180 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIA 243 P +++ G H+ S + + Q R ++ GGG G+ Sbjct: 181 LRDSPALRLDGFHFHLMSHQRDAQVHLRLIAHYLQTVQGWRQTYALGPLTVNAGGGFGVD 240 Query: 244 YHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 Y + + + + ++ LEPGR++ A G + +V+ IK+S F Sbjct: 241 YAAPEASFDWAAFCAGLPPLLRAHGTDLRLRLEPGRYVSAACGWYLMEVLDIKRSHGAYF 300 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIALNRKIALP 360 I + F P H + +VG +C D +A + +A Sbjct: 301 AIGRGGTHHFRTPAAQGHDHPFRVLRGTQAPMLCDAQVTLVGQLCTPKDVLARAQPVAAL 360 Query: 361 RPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVN 394 PGD L GAY S + + ++ Sbjct: 361 APGDCLAFSLAGAYAWNISHQQFLMHPPPHMLFLD 395 >gi|296394573|ref|YP_003659457.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] gi|296181720|gb|ADG98626.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] Length = 421 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 85/374 (22%), Positives = 137/374 (36%), Gaps = 28/374 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP + + Y + A V YA+KAN V++ LA GS D+ S E+ Sbjct: 53 TPCLVVDLETVRERYCQLTAALP--KARVYYAVKANPAAEVVRELAAAGSCFDVASVAEI 110 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 LAA + + K ++ A G+ + +SE++L+ L++ A I Sbjct: 111 ELCLAAGANPRDLCYGNTIKKPADVAKAHALGVRLYTTDSETDLEALSEHAPGSSVFCRI 170 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A + + KFG SL A TL +GV H GSQ Sbjct: 171 AAVHDGAV----------YSFGAKFGCAPELAESLLLRAGTLGLA-AAGVSFHSGSQQLD 219 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ + +L + G + +++GGGL +Y P + A Sbjct: 220 PHAWRSGIAHAAQIAARLAAKGVRLPMLNIGGGLPGSYTHAAPPLADYADAISAAVREHF 279 Query: 267 -----LQCKIILEPGRFLVADV---GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + ++LEPGR+LVAD V V + + +V +D + + T + Sbjct: 280 GAVGLHEPLLVLEPGRYLVADAGLLRSEVVLVSRKSPADEHRWVYVDAGRYNGLTETEGE 339 Query: 319 AYHEINYIVNPAGD---RLHIHADIVGPICETGDFIAL---NRKIALPRPGDLLYIEKTG 372 + AG + GP C+ D + R + R GD L TG Sbjct: 340 CVAYVLASPEHAGPAAAEDTAPVYLAGPTCDGDDVLYQRTVYRLPSALRVGDHLDFLSTG 399 Query: 373 AYGAVQSG-TYNSR 385 AY A + +N Sbjct: 400 AYTASYASIAFNGF 413 >gi|256274307|gb|EEU09214.1| Spe1p [Saccharomyces cerevisiae JAY291] Length = 466 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 78/394 (19%), Positives = 137/394 (34%), Gaps = 41/394 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ +++ + + + YA+K N + V+ LA LG D S+ E+ R Sbjct: 87 FFICDLGEVKRLFNNWVKELPRIKP--FYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ + +RIV++ K I A + ++ EL + + IA Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIA- 203 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + K+G + + L L + ++GV H+GS Sbjct: 204 ---------TDDSTAQCRLSTKYGCEMENVDVLLKAIKELG-LNLAGVSFHVGSGASDFT 253 Query: 209 SFHKAFKLLRDLTQQLRSNG--HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 S +KA + R + + S ++ +DVGGG + + Sbjct: 254 SLYKAVRDARTVFDKAASEYGLPPLKILDVGGGFQFESFKESTAVLRLAL---EEFFPVG 310 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK-SADKTFVILDVAMNDFMRPTLYDAYHEINY 325 II EPGR+ VA L + VI+ +K S ++ + + + M L+D Sbjct: 311 CGVDIIAEPGRYFVATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPR 370 Query: 326 IVNPAGD---------------------RLHIHADIVGPICETGDFIALNRKI-ALPRPG 363 + D I GP C+ D IA + G Sbjct: 371 TLYHNLDFHYNDFESTTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVG 430 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ 397 D Y GAY + + +N +I+ S+ Sbjct: 431 DWFYFPALGAYTSSAATQFNGFEQTADIVYIDSE 464 >gi|103486686|ref|YP_616247.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256] gi|98976763|gb|ABF52914.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256] Length = 390 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 72/391 (18%), Positives = 125/391 (31%), Gaps = 27/391 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P + I N + D V ALKA S ++ T+A G+ Sbjct: 18 RVPSPAFVVDAAKIRSNLALLRHIGDASGARVLAALKAFSMWSLGPTVAEYLDGVCASGL 77 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL-NQRAVSLGK 142 E + A E + K D ++A S FN + + G+ Sbjct: 78 YEAKLGR-AEYGGEVATYCAGYKEADLPEIAALSDHLIFNSPGQIARFRPLLDDLRAKGE 136 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + RVNP + K + G PI Q+ + + Sbjct: 137 RFDVGLRVNPMHSEGEVAKYDPAAPCSRLGFPITQLLPEHMDGVD-----------GVHM 185 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + + LR ++ I+ GGG + D + + Q Sbjct: 186 HSLCEQDFPPLERTWSAVHPMLRPFFGQLKWINFGGGHHVTRAD----YQVDDLIAFLKQ 241 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 C +++EPG + D GILV +++ + + + + + D E Sbjct: 242 VRAATDCDVMIEPGEAIALDAGILVGELLDLFHNG------MSIGITDISATCHMPDVIE 295 Query: 323 INYIVNPAGDRLHIHAD-IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 Y G+ + GP C GD I R R G Y V++ T Sbjct: 296 APYRPAMLGEGSEGAVTRLGGPSCLAGDVIGDYRLPGGARIGQRFAFLDQAHYSMVKTNT 355 Query: 382 YNSRLLIPEIMVNG--SQFHIIRPRMTFQEL 410 +N L + + + +IR F++ Sbjct: 356 FNGVPLPSIWLWDSETDELELIRQ-FGFEDF 385 >gi|207343677|gb|EDZ71070.1| YKL184Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 466 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 76/394 (19%), Positives = 137/394 (34%), Gaps = 41/394 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ +++ + + + YA+K N + V+ LA LG D S+ E+ R Sbjct: 87 FFICDLGEVKRLFNNWVKELPRIKP--FYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ + +RIV++ K I A + ++ EL + + IA Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIA- 203 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + K+G + + L L + ++GV H+GS Sbjct: 204 ---------TDDSTAQCRLSTKYGCEMENVDVLLKAIKELG-LNLAGVSFHVGSGASDFT 253 Query: 209 SFHKAFKLLRDLTQQLRSNG--HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 S +KA + R + + + ++ +DVGGG + + Sbjct: 254 SLYKAVRDARTVFDKAANEYGLPPLKILDVGGGFQFESFKESTAVLRLAL---EEFFPVG 310 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK-SADKTFVILDVAMNDFMRPTLYDAYHEINY 325 II EPGR+ VA L + VI+ +K S ++ + + + M L+D Sbjct: 311 CGVDIIAEPGRYFVATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPR 370 Query: 326 IVNPAGD---------------------RLHIHADIVGPICETGDFIALNRKI-ALPRPG 363 + + I GP C+ D IA + G Sbjct: 371 TLYHNLEFHYNDFESTTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVG 430 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ 397 D Y GAY + + +N +I+ S+ Sbjct: 431 DWFYFPALGAYTSSAATQFNGFEQTADIVYIDSE 464 >gi|190409659|gb|EDV12924.1| ornithine decarboxylase [Saccharomyces cerevisiae RM11-1a] Length = 466 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 76/394 (19%), Positives = 137/394 (34%), Gaps = 41/394 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ +++ + + + YA+K N + V+ LA LG D S+ E+ R Sbjct: 87 FFICDLGEVKRLFNNWVKELPRIKP--FYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ + +RIV++ K I A + ++ EL + + IA Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIA- 203 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + K+G + + L L + ++GV H+GS Sbjct: 204 ---------TDDSTAQCRLSTKYGCEMENVDVLLKAIKELG-LNLAGVSFHVGSGASDFT 253 Query: 209 SFHKAFKLLRDLTQQLRSNG--HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 S +KA + R + + + ++ +DVGGG + + Sbjct: 254 SLYKAVRDARTVFDKAANEYGLPPLKILDVGGGFQFESFKESTAVLRLAL---EEFFPVG 310 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK-SADKTFVILDVAMNDFMRPTLYDAYHEINY 325 II EPGR+ VA L + VI+ +K S ++ + + + M L+D Sbjct: 311 CGVDIIAEPGRYFVATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPR 370 Query: 326 IVNPAGD---------------------RLHIHADIVGPICETGDFIALNRKI-ALPRPG 363 + + I GP C+ D IA + G Sbjct: 371 TLYHNLEFHYNDFESTTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVG 430 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ 397 D Y GAY + + +N +I+ S+ Sbjct: 431 DWFYFPALGAYTSSAATQFNGFEQTADIVYIDSE 464 >gi|151941735|gb|EDN60096.1| ornithine decarboxylase [Saccharomyces cerevisiae YJM789] gi|323336859|gb|EGA78121.1| Spe1p [Saccharomyces cerevisiae Vin13] gi|323354229|gb|EGA86073.1| Spe1p [Saccharomyces cerevisiae VL3] Length = 466 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 76/394 (19%), Positives = 137/394 (34%), Gaps = 41/394 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ +++ + + + YA+K N + V+ LA LG D S+ E+ R Sbjct: 87 FFICDLGEVKRLFNNWVKELPRIKP--FYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ + +RIV++ K I A + ++ EL + + IA Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIA- 203 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + K+G + + L L + ++GV H+GS Sbjct: 204 ---------TDDSTAQCRLSTKYGCEMENVDVLLKAIKELG-LNLAGVSFHVGSGASDFT 253 Query: 209 SFHKAFKLLRDLTQQLRSNG--HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 S +KA + R + + + ++ +DVGGG + + Sbjct: 254 SLYKAVRDARTVFDKAANEYGLPPLKILDVGGGFQFESFKESTAVLRLAL---EEFFPVG 310 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK-SADKTFVILDVAMNDFMRPTLYDAYHEINY 325 II EPGR+ VA L + VI+ +K S ++ + + + M L+D Sbjct: 311 CGVDIIAEPGRYFVATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPR 370 Query: 326 IVNPAGD---------------------RLHIHADIVGPICETGDFIALNRKI-ALPRPG 363 + + I GP C+ D IA + G Sbjct: 371 TLYHNLEFHYNDFESTTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVG 430 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ 397 D Y GAY + + +N +I+ S+ Sbjct: 431 DWFYFPALGAYTSSAATQFNGFEQTADIVYIDSE 464 >gi|6322664|ref|NP_012737.1| Spe1p [Saccharomyces cerevisiae S288c] gi|118385|sp|P08432|DCOR_YEAST RecName: Full=Ornithine decarboxylase; Short=ODC gi|172070|gb|AAA34829.1| ornithine decarboxylase [Saccharomyces cerevisiae] gi|395241|emb|CAA52254.1| unnamed protein product [Saccharomyces cerevisiae] gi|486325|emb|CAA82027.1| SPE1 [Saccharomyces cerevisiae] gi|285813085|tpg|DAA08982.1| TPA: Spe1p [Saccharomyces cerevisiae S288c] Length = 466 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 76/394 (19%), Positives = 137/394 (34%), Gaps = 41/394 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ +++ + + + YA+K N + V+ LA LG D S+ E+ R Sbjct: 87 FFICDLGEVKRLFNNWVKELPRIKP--FYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ + +RIV++ K I A + ++ EL + + IA Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIA- 203 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + K+G + + L L + ++GV H+GS Sbjct: 204 ---------TDDSTAQCRLSTKYGCEMENVDVLLKAIKELG-LNLAGVSFHVGSGASDFT 253 Query: 209 SFHKAFKLLRDLTQQLRSNG--HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 S +KA + R + + + ++ +DVGGG + + Sbjct: 254 SLYKAVRDARTVFDKAANEYGLPPLKILDVGGGFQFESFKESTAVLRLAL---EEFFPVG 310 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK-SADKTFVILDVAMNDFMRPTLYDAYHEINY 325 II EPGR+ VA L + VI+ +K S ++ + + + M L+D Sbjct: 311 CGVDIIAEPGRYFVATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPR 370 Query: 326 IVNPAGD---------------------RLHIHADIVGPICETGDFIALNRKI-ALPRPG 363 + + I GP C+ D IA + G Sbjct: 371 TLYHNLEFHYDDFESTTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVG 430 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ 397 D Y GAY + + +N +I+ S+ Sbjct: 431 DWFYFPALGAYTSSAATQFNGFEQTADIVYIDSE 464 >gi|290983144|ref|XP_002674289.1| ornithine decarboxylase [Naegleria gruberi] gi|284087878|gb|EFC41545.1| ornithine decarboxylase [Naegleria gruberi] Length = 536 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 72/413 (17%), Positives = 132/413 (31%), Gaps = 69/413 (16%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + F ++ YA+K N N+++IK + +G G D S E++ Sbjct: 126 FHIVDLSHVIRQVERWRLCFPRINP--YYAVKCNPNESIIKVMYMMGCGFDCASLNEIKL 183 Query: 89 ALAAPVPAERI---------------------------------VFSGVGKTIDEIDLAL 115 + +F+ K + + A Sbjct: 184 VTQLCNEVDEWFAKHPHFYEVLAFVNNVTVEQVMSKKFCTTTDIIFANPCKQLSHVRYAR 243 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 +G+ ++S E++ L ++ + I T S KFG+ I Sbjct: 244 DNGLQWTTIDSPQEVEKLARQWKDVKGVIRI----------KTDDSNSACAFSSKFGVSI 293 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 ++ A V++ GV H+GS + ++ KA K R + G++ +D Sbjct: 294 ENARGIFQSAKD-NNVELCGVSFHVGSGCQDVNAYVKAVKDARIIFDMAEEYGYSFNLLD 352 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI---- 291 +GGG + + K+I EPGRF+ V +LV + Sbjct: 353 IGGGFLGNIKETPTVEDVASNVRDLIDDLFPSHVKVISEPGRFIAQAVSVLVVNIFSKKD 412 Query: 292 ------------------SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR 333 I D L+ + +D + A ++ Sbjct: 413 LREENKLYYKQLEESGASDIVHDRDDFIYYLNDGIYGSFNNIYFDHAEPTFKTIKTAEEK 472 Query: 334 -LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + GP C++ D + GD LY GAY S +N Sbjct: 473 GAKYKSTCFGPTCDSIDITCKGYLLPELNEGDFLYFTNFGAYTTASSSQFNGF 525 >gi|325970023|ref|YP_004246214.1| ornithine decarboxylase [Spirochaeta sp. Buddy] gi|324025261|gb|ADY12020.1| Ornithine decarboxylase [Spirochaeta sp. Buddy] Length = 397 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 89/368 (24%), Positives = 144/368 (39%), Gaps = 19/368 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPF + IE+ Y +A + YA+KAN AV+ L LGS D+ S EL Sbjct: 36 TPFQLILSDVIEEKYQELLDAIPF--AKIYYAVKANPAPAVLSLLDRLGSNFDVASVYEL 93 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 RR + A+R+ K + I +GI F +S E N + G K + Sbjct: 94 RRLQELGISADRMSCGNTIKKFEHIKEFYAAGIRLFVTDS--EGDLRNIAMAAPGSKIMV 151 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A KFG L A L ++ G+ H+GSQ Sbjct: 152 RLMTEGAQTA-------DWPLSRKFGCSPDLAGDLLILARKLG-LQPWGLSFHVGSQQRD 203 Query: 207 IESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQY 263 I ++ A + L L + + I++GGG Y P + + + + Sbjct: 204 ITAWDSALSKVSYLFTWLLENEDLKLSCINMGGGFPATYRERTNPVQTYADEIKRYLEED 263 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +G++ +II+EPGR LV D G+LV++++ I + + + I Sbjct: 264 YGDILPEIIIEPGRSLVGDSGVLVSEIVLISRKSRTALERWVYQDCGRFGGLMETLGEAI 323 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKTGAYGAVQSG 380 +Y + + + GP C++ D + + ++ L GD LY TGAY + S Sbjct: 324 HYPILCERNGPLEQVILAGPTCDSMDTLYEDYRYELPLSLAVGDRLYWLSTGAYTSSYSA 383 Query: 381 -TYNSRLL 387 +N Sbjct: 384 IEFNGFPP 391 >gi|58265238|ref|XP_569775.1| ornithine decarboxylase [Cryptococcus neoformans var. neoformans JEC21] gi|57226007|gb|AAW42468.1| ornithine decarboxylase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 527 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 78/438 (17%), Positives = 149/438 (34%), Gaps = 70/438 (15%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 V +++ A F+ +A+ + + + G + YA+K N + AV+ L+ + Sbjct: 98 GVDIDESA------FFAADLSAVYQAVQMWRASPIGSRVEIFYAVKCNPSPAVLHLLSLM 151 Query: 75 GSGLDIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G+ D S E+ + L+ P +RI+F+ K I A Q G+ ++ EL Sbjct: 152 GTSFDCASSSEINQVLSLPSAPSGDRIIFANPCKPASFIRTAAQRGVSMMTFDNVDELYK 211 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + + + + T S + KFG P+ L A L + Sbjct: 212 VKRICPNAKLVLRML----------TDDSKSLCRLGLKFGAPVDSCPGLLKVARQLG-LN 260 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + GV H+GS F A R + + G+N +D+GGG ++ Sbjct: 261 VVGVSFHVGSGCKDPMQFADAVWRARKVFDMGKEAGYNFDLLDIGGGFERETFAEMTQVL 320 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-------------- 298 + + + +II EPGRFLV+ L T +I+ +++ Sbjct: 321 KDSF---DLYFPEDSGVRIIAEPGRFLVSSAFTLATSIIASRRAPKAEASQQVQAATQED 377 Query: 299 ----KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD---------------------- 332 ++ + ++D + + Sbjct: 378 TKSADVMYYINDGVYGSFNCIMFDHQIVHPHPLTIGHKLAIAAPPFPPPPNVQLEVDLPV 437 Query: 333 ----RLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 + + GP C++ D + + GD + + GAY + T+N Sbjct: 438 QMGYKDVEKVSVWGPTCDSIDCVRQLVDLPKGMDVGDWIGWGEMGAYTLCAASTFNGFDR 497 Query: 388 IPEIMVNGS---QFHIIR 402 P + G ++R Sbjct: 498 SPVLWTTGGNTEDARMVR 515 >gi|134109243|ref|XP_776736.1| hypothetical protein CNBC2270 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259416|gb|EAL22089.1| hypothetical protein CNBC2270 [Cryptococcus neoformans var. neoformans B-3501A] Length = 527 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 78/438 (17%), Positives = 149/438 (34%), Gaps = 70/438 (15%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 V +++ A F+ +A+ + + + G + YA+K N + AV+ L+ + Sbjct: 98 GVDIDESA------FFAADLSAVYQAVQMWRASPIGSRVEIFYAVKCNPSPAVLHLLSLM 151 Query: 75 GSGLDIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G+ D S E+ + L+ P +RI+F+ K I A Q G+ ++ EL Sbjct: 152 GTSFDCASSSEINQVLSLPSAPSGDRIIFANPCKPASFIRTAAQRGVSMMTFDNVDELYK 211 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + + + + T S + KFG P+ L A L + Sbjct: 212 VKRICPNAKLVLRML----------TDDSKSLCRLGLKFGAPVDSCPGLLKVARQLG-LN 260 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + GV H+GS F A R + + G+N +D+GGG ++ Sbjct: 261 VVGVSFHVGSGCKDPMQFADAVWRARKVFDMGKEAGYNFDLLDIGGGFERETFAEMTQVL 320 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-------------- 298 + + + +II EPGRFLV+ L T +I+ +++ Sbjct: 321 KDSF---DLYFPEDSGVRIIAEPGRFLVSSAFTLATSIIASRRAPKAEASQQVQAATQED 377 Query: 299 ----KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD---------------------- 332 ++ + ++D + + Sbjct: 378 TKSADVMYYINDGVYGSFNCIMFDHQIVHPHPLTIGHKLAIAAPPFPPPPNVQLEVDLPV 437 Query: 333 ----RLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 + + GP C++ D + + GD + + GAY + T+N Sbjct: 438 QMGYKDVEKVSVWGPTCDSIDCVRQLVDLPKGMDVGDWIGWGEMGAYTLCAASTFNGFDR 497 Query: 388 IPEIMVNGS---QFHIIR 402 P + G ++R Sbjct: 498 SPVLWTTGGNTEDARMVR 515 >gi|150006522|ref|YP_001301266.1| diaminopimelate decarboxylase [Bacteroides vulgatus ATCC 8482] gi|265751974|ref|ZP_06087767.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_33FAA] gi|294778860|ref|ZP_06744277.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Bacteroides vulgatus PC510] gi|149934946|gb|ABR41644.1| diaminopimelate decarboxylase [Bacteroides vulgatus ATCC 8482] gi|263236766|gb|EEZ22236.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_33FAA] gi|294447313|gb|EFG15896.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Bacteroides vulgatus PC510] Length = 391 Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats. Identities = 83/388 (21%), Positives = 152/388 (39%), Gaps = 10/388 (2%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP + + + N L F A + + + Y++K NS ++ L LG ++VS Sbjct: 8 TPCFILDSDKLVSNVLEFKRALNSRFSNHCIGYSIKTNSLPYMLHMLNELGCYAEVVSYT 67 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E AL IV++G K + A+++G Y N++++ E++ LN K Sbjct: 68 EYALALQVGFEKSHIVYNGPAKDKETFLDAIKNGAY-VNIDTKREIEWLNDLNKQHSYKV 126 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I +N + K F ++ VK+ G+ +H S Sbjct: 127 GIRVNLNLGKISPEDAKEGESDSRFGFSFENGELEEAINKIQLCKNVKLGGLHLHRTSLT 186 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH--SDHRPPSSSDYASLIHQ 262 + + + + + + S G + +IDVGGG ++ + Y+SL+ + Sbjct: 187 RSLNVYR---NICKYAIRIINSLGLELDYIDVGGGYFGDKPNAPTYKEYVDTIYSSLLEE 243 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + K+I+EPG +VA ++++I KK D ++ D + ND L + Sbjct: 244 GIDVSKMKVIVEPGNAIVASPFSFLSEIIDTKKIGDSQIIVTDGSRNDVDPFFL-KKDYF 302 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 ++I +VG C D + + L GD + + GAY S + Sbjct: 303 KSFIRKQEEKVFIDSQMVVGCSCLEYDKLFTLQNQPLLNVGDRILYQNVGAYTMTLSPLF 362 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 R + + + IIR T +L Sbjct: 363 I-RFFPRVYLKTLNGYEIIREEWTVNDL 389 >gi|34147969|gb|AAQ62560.1| arginine decarboxylase [Homo sapiens] Length = 460 Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats. Identities = 73/371 (19%), Positives = 129/371 (34%), Gaps = 30/371 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 +PA +I+ + K I +I A + GI + ++E EL + + S IA Sbjct: 99 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG+ + L A V++ GV HIGS + Sbjct: 158 ---------TDDSHSLSCLSLKFGVSLKSCRHLLENAKKH-HVEVVGVSFHIGSGCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GG + R + + + Sbjct: 208 AYAQSIADARLVFEMGTELGHKMHVLDLGGXFPGTEGAKVRFEEIASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 I E GR+ V + +I+ K S + + + F Sbjct: 268 CGVDIFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIF 327 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P+ ++ + + GP + D +A + GD L + Sbjct: 328 NSVLFDNICPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNM 387 Query: 372 GAYGAVQSGTY 382 GAY + Sbjct: 388 GAYTVGMGSPF 398 >gi|21229287|ref|NP_635209.1| ornithine decarboxylase [Methanosarcina mazei Go1] gi|20907866|gb|AAM32881.1| Ornithine decarboxylase [Methanosarcina mazei Go1] Length = 390 Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats. Identities = 97/373 (26%), Positives = 152/373 (40%), Gaps = 19/373 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPF IE++Y + YA+KAN V+ L GS D+ + EL Sbjct: 31 TPFLIVDLQKIERSYDELVEHMPF--AKIHYAVKANPLDKVVLALKRKGSNFDVATIYEL 88 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + + V ERI + K +I A +G+ F +SES+LK L +RA I Sbjct: 89 DQLIRLGVEPERISYGNTIKKEKDIAYAYDNGVRLFVTDSESDLKKLARRAPGSRVFFRI 148 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 T + KFG I+ L A L ++ G+ H+GSQ Sbjct: 149 L----------TESDGADWPLSRKFGSHPDLIYKLILKAEKLG-LEPYGLSFHVGSQQRD 197 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP--SSSDYASLIHQYF 264 I + A + L + + G +++ I++GGG Y S + + +H+ F Sbjct: 198 IGQWDNAIAKCKYLFEAVAEKGIHLKMINLGGGFPAKYQSQAHDLETYAHEIRRFLHEDF 257 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 G +I++EPGR LVAD GI+V++VI I K A + I Sbjct: 258 GEELPEILIEPGRSLVADAGIIVSEVIMIAKKARFNQYKWVYLDIGKFGGLIETLDECIK 317 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSG- 380 Y + + GP C++ D + + K + P R G+ +YI TGAY S Sbjct: 318 YPIFCDKKGCAEEVILAGPTCDSMDILYEHHKYSFPHTMRDGNRVYIFTTGAYTQSYSSI 377 Query: 381 TYNSRLLIPEIMV 393 +N + ++ Sbjct: 378 CFNGFPPLKAYVI 390 >gi|238925685|ref|YP_002939202.1| carboxynorspermidine decarboxylase [Eubacterium rectale ATCC 33656] gi|238877361|gb|ACR77068.1| carboxynorspermidine decarboxylase [Eubacterium rectale ATCC 33656] Length = 395 Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats. Identities = 66/390 (16%), Positives = 115/390 (29%), Gaps = 15/390 (3%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + ++TP Y + +N L + + A KA S + SG Sbjct: 15 INELRTPCYVIDEGKLTENLLILNGVMQRTGARILLAQKAFSAFYEYPLIGRYLSGTTAS 74 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E R A + E VF + +L FN S+ L Sbjct: 75 GLFEARLAHE-EMGKENHVFCPAFLPQEMDELVEICDHIVFNSVSQYLLHRDKIEKADKK 133 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + + GI + L ++ Sbjct: 134 ISVGLRINPECSTQEGH-EIYDPCAPGSRLGITREALDKAIKNGLDLSRIEGFHFHTLCE 192 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E+ A + ++ + ++ +++GGG I I Sbjct: 193 QDSDALETTLAAVE------EKFGDLLYGLKWLNMGGGHHITRAD----YDIERLEKCIM 242 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 +I LEPG + D G L T V+ I ++ +ILD + M L Y Sbjct: 243 HMRDKYDLEIYLEPGEAVALDAGYLETTVLDIVENNGIKILILDTSAACHMPDVLEMPYR 302 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 G++ + C GD I + GD L Y V++ T Sbjct: 303 PPLMDSGEPGEK-KYTYRLSSCTCLAGDVIGDYSFDREIKTGDRLCFCDMAIYSMVKNNT 361 Query: 382 YNSRLLI-PEIMVNGSQFHIIRPRMTFQEL 410 +N L +M + +IR +++ Sbjct: 362 FNGMPLPDIAVMDENNDCKVIRRFE-YEDF 390 >gi|50286011|ref|XP_445434.1| hypothetical protein [Candida glabrata CBS 138] gi|49524739|emb|CAG58345.1| unnamed protein product [Candida glabrata] Length = 463 Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats. Identities = 81/390 (20%), Positives = 146/390 (37%), Gaps = 35/390 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ IE+ Y + YA+K N + +I+ LA LG+ D S+ E+ + Sbjct: 87 FFVCDLGEIERLYANWWKELPR--VQPFYAVKCNPDLKIIRKLADLGANFDCASKLEIDK 144 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ V ERI+++ K I A + + ++ EL + + IA Sbjct: 145 VLSMDVNPERIIYANPCKAASFIRYAATNKVMKSTFDNVEELHKIKKFHPESQLFLRIA- 203 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + K+G + ++ SL TL + + GV H+GS Sbjct: 204 ---------TDDSTAQCRLSTKYGCEMERVDSLLECIKTLG-LNLVGVSFHVGSGASDFS 253 Query: 209 SFHKAFKLLRDLTQQLRSNG--HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 S +KA + R + + ++ ++ +DVGGG + + + + Sbjct: 254 SLYKAVRDARIVFDKAVNDYGLPELKTLDVGGGFQLESFKESSAVLRLAL---DEYFPES 310 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKT-FVILDVAMNDFMRPTLYDAYHEINY 325 + II EPGR+LVA L VI+ +K + + ++ + M L+D Sbjct: 311 SKVDIIAEPGRYLVASAFTLSANVIAKRKLNEAESMIYVNDGVYGNMNCILFDHQEPTPR 370 Query: 326 IVNPAGD---------------RLHIHADIVGPICETGDFIALNRKI-ALPRPGDLLYIE 369 + + + GP C+ D I + GD LY Sbjct: 371 TLWHDNNYHYDDFDSTSPNPITTCPYKVSMWGPTCDGLDCITKEYYMKHDLVVGDWLYFP 430 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 + GAY + + +N +I+ S+ H Sbjct: 431 RLGAYTSSAATPFNGFDQTADIIYINSENH 460 >gi|326436541|gb|EGD82111.1| ornithine decarboxylase [Salpingoeca sp. ATCC 50818] Length = 577 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 78/410 (19%), Positives = 133/410 (32%), Gaps = 64/410 (15%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + ++ YA+K NS+ A++ TLA LG+ D S GE++ Sbjct: 104 FFLTDLGDVCRKHKRWQAHLPMVEP--FYAVKCNSDPAILGTLAALGANFDCASLGEIQA 161 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V ++R++F+ K I + A Q G+ ++E EL + + + Sbjct: 162 ILNLGVSSDRVIFANPCKAIAHLRFAKQVGVRMMTFDNEFELLKIAKHYPGAALVLRVL- 220 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 S + KFG L A L + GV H+GS Sbjct: 221 ---------ADDSRSACRLGLKFGADPAVTGHLLQLARQLGL-DVVGVSFHVGSGATDAR 270 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG--IAYHSDHRPPSSSDYASLIHQYFGN 266 +F A R + + + G + +DVGGG + D A + F Sbjct: 271 AFADAVARARAVFDEAAALGFSPHLLDVGGGFPGDDPAATPAAAVRFEDIARELRSAFAE 330 Query: 267 LQCK-------IILEPGRFLVADVGILVTKV----------------------------- 290 II EPG + VA L + Sbjct: 331 HFPPSAVPGLRIIAEPGWYYVASASSLAVCITSKRRVVDVTATTPTATTGATPTTPASNA 390 Query: 291 ----------ISIKKSADKTFVILDVAMNDFMR---PTLYDAYHEINYIVNPAGDRLHIH 337 + D + + + D R LY + Sbjct: 391 TPHPATEPPPKFMYYVNDGVYQSFNCIIFDHARVQAQVLYTGNGVPAMDDEHLAAAVLHE 450 Query: 338 ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 + + GP C++ D + + + GD L + GAY + + T+N L Sbjct: 451 SSVWGPTCDSIDCVQASTMLPELDVGDWLVFDNMGAYTSCAASTFNGFAL 500 >gi|209544203|ref|YP_002276432.1| Orn/DAP/Arg decarboxylase 2 [Gluconacetobacter diazotrophicus PAl 5] gi|209531880|gb|ACI51817.1| Orn/DAP/Arg decarboxylase 2 [Gluconacetobacter diazotrophicus PAl 5] Length = 376 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 88/373 (23%), Positives = 141/373 (37%), Gaps = 21/373 (5%) Query: 21 LAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA TP +E Y + + YA+KAN A+++ L LGS D Sbjct: 9 LAEQAPATPCLVVDVDRVEARYQSLRAVLPL--ARIYYAVKANPAPAILRRLVSLGSAFD 66 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S E+R LAA I F K I A Q+G+ F +S EL+ L + A Sbjct: 67 AASWEEIRLCLAAGAAGADISFGNTVKKASAIAQAHQAGVTMFAFDSIEELEKLARHAPG 126 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + KFG + L A + + G+ H Sbjct: 127 SRVYCRLIVENEGA----------EWPLSRKFGTTLDSARDLMLRARDMG-LDPYGLSFH 175 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA-- 257 +GSQ +++ A + L L + G N++ +++GGG I Y D A Sbjct: 176 VGSQQTSTDAYEAAIARVGMLFTDLAAAGLNLRMVNLGGGFPIRYREDVPEIDRFAVAIS 235 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + ++FGN ++I+EPGRF+V D G++ ++V+ + + + Sbjct: 236 HAMTEHFGNDLPEMIVEPGRFIVGDAGVVSSEVVLVTRRGQQDGPRWVYLDIGRFGGLAE 295 Query: 318 DAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGA 373 I Y + D I GP C+ D + + L GD + + TGA Sbjct: 296 TEGESIRYGIRTPHDGSPAGRVAIAGPTCDGADIMYEKAPYALPLDLACGDRIELLSTGA 355 Query: 374 YGAVQ-SGTYNSR 385 Y + S ++N Sbjct: 356 YVSTYCSTSFNGF 368 >gi|38637786|ref|NP_942760.1| putative diaminopimelate decarboxylase [Ralstonia eutropha H16] gi|32527124|gb|AAP85874.1| putative diaminopimelate decarboxylase [Ralstonia eutropha H16] Length = 416 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 89/355 (25%), Positives = 146/355 (41%), Gaps = 12/355 (3%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y A+ ++ + + YA+KANS+ +++TLA L G +I S GEL Sbjct: 35 YVYDLEALRRHATATARGLP-PGFELFYAIKANSDLPILQTLAPLAHGFEISSGGELAWV 93 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 ++FSG GKT E+ AL+ G+ +VES EL+ L A + G AP+ R Sbjct: 94 REHFADV-PLIFSGPGKTDAELAGALELGVEALHVESLHELERLAWLARARGVTAPVLLR 152 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN I + G K FGI Q+ + A+ P +++ G H+ S + Sbjct: 153 VNLAIEGLQATTLMMGGKPTPFGIAGDQLPACLAWLRAHPEIRLRGFHFHLMSHQLDAAA 212 Query: 210 FHKAFKLLRDLTQQLRSNG--HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + ++ R+ + ++VGGG+G+ Y R + +A + Sbjct: 213 HLRLLDAYLQQVRRWRAEYGLDTLDQVNVGGGIGVNYREPERQFDWAGFAEGLPALSAQR 272 Query: 268 QCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI--- 323 + LE GR++ A G +VI +K + D+ FV+ + F P H Sbjct: 273 DGLTVRLECGRYITAFCGYYAMEVIDVKHAFDRAFVVACGGTHHFRTPYAQGHSHPFRVL 332 Query: 324 ----NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 +VG +C D +A + + R GD++ GAY Sbjct: 333 PVESWRYPFARPGVRDARVSVVGQLCTPKDVLAQDAPVDSVRAGDMVVFPYAGAY 387 >gi|255077437|ref|XP_002502359.1| adenosylmethionine/pyridoxal dependant decarboxylase fusion protein [Micromonas sp. RCC299] gi|226517624|gb|ACO63617.1| adenosylmethionine/pyridoxal dependant decarboxylase fusion protein [Micromonas sp. RCC299] Length = 1039 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 77/424 (18%), Positives = 126/424 (29%), Gaps = 64/424 (15%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 + + + + M YA+K N + V+ LA LGS D S E+ + Sbjct: 629 VVDLGVVMRRWRYWRATIPR--AMPHYAVKCNPDTGVLAILAALGSSFDCASATEVDMVM 686 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A V +RI+++ K + G+ +S +EL + + + + Sbjct: 687 ALGVTPDRIIYANPCKMPAHLARVRDCGVGLTTFDSVAELHKIYE---LAPEMKVVLRLR 743 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 D +A +KFG +I L A L + GV H+GS +F Sbjct: 744 ADDPDA-------RCVLGNKFGAEPPEIEPLLTAAKHLGI-HVEGVAFHVGSGATNPRAF 795 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY----------ASLI 260 A + R G + GG + SD A+L Sbjct: 796 RVALERARLAFDIAERVGLPPLKLVDIGGGFSGSVRTVAATNDSDVTLTEVAKTVNAALE 855 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS----------ADKTFVILDVAMND 310 + + +II EPGR+ L T V S + D + + Sbjct: 856 EFFPESSGVRIISEPGRYFAEATTTLATMVFSRRIRSEEDGSVAKGGDTHQYFVSDGLYG 915 Query: 311 FMRPTLYDAYHEINYIVNPAGDRL--------------------------HIHADIVGPI 344 M LYD I+ + + + + GP Sbjct: 916 MMNCLLYDHASITARILPVSTNAAALAGGDLNGIVPRGVYSNEEDTNGLTKYPSTVFGPT 975 Query: 345 CETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE----IM-VNGSQFH 399 C+ D + N + GD L GAY +N + + Sbjct: 976 CDGIDKVLENTLLPEVSIGDWLLFPHMGAYTVSAGSNFNGFDCAGVRKYYVASIVDGDPD 1035 Query: 400 IIRP 403 IR Sbjct: 1036 EIRR 1039 >gi|178057321|ref|NP_001116665.1| arginine decarboxylase [Sus scrofa] gi|170780176|gb|ACB37315.1| arginine decarboxylase [Sus scrofa] Length = 460 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 71/369 (19%), Positives = 130/369 (35%), Gaps = 30/369 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ A+ + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFLADLGAVVRKHFYFLKCLPR--VRPFYAVKCNSSPGVLKVLAELGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP +I+++ K I +I A + G+ + ++E EL + + S IA Sbjct: 99 VQHIGVPTSKIIYANPCKQIAQIKYAAKHGVQLLSFDNEMELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG + L A +++ GV HIGS + Sbjct: 158 ---------TDDSHSLSHLSFKFGASLKSCRHLLENA-KRNHMEVVGVSFHIGSGCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADARLVFEMGAELGHRMHILDLGGGFPGVEGAKVRFEEIASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK---------------SADKTFVILDVAMNDF 311 I+ + GR+ V L +I+ K+ + + + F Sbjct: 268 CGIDILAKLGRYYVTSAFTLAVSIIAKKEVLLDQPGREEETGSAPKTIVYHLGEGVYGIF 327 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P+ ++ + + GP+ + D +A + GD L E Sbjct: 328 NSVLFDNTCPTPVLPKKPSPEQPLYSSSLWGPVVDGCDCVAEGLWLPSLHVGDWLVFENM 387 Query: 372 GAYGAVQSG 380 GAY Sbjct: 388 GAYTVGMGS 396 >gi|301062805|ref|ZP_07203403.1| carboxynorspermidine decarboxylase [delta proteobacterium NaphS2] gi|300443067|gb|EFK07234.1| carboxynorspermidine decarboxylase [delta proteobacterium NaphS2] Length = 385 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 68/404 (16%), Positives = 116/404 (28%), Gaps = 33/404 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M L + L V TP + + +N + D + ALK Sbjct: 1 MD----RNNPL---GLDL----EGVSTPCFVVDEGRLRQNLAVLKHVQDRTGCRILLALK 49 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 A + +V L G+ S E R E F+ + S + Sbjct: 50 AFAMFSVFPLLGKTLHGVCASSPHEARLGYE-EFKGEVHTFAAAYSEAQMRKVMRYSNVV 108 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN S+ + + S + I + + G+ Sbjct: 109 VFNSFSQWDRFRPFLQNASKDIRCGIRVNPEH--SEGKVPLYDPCASGSRLGV------- 159 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 S G ++G+ + + + LR ++ S + ++ GGG Sbjct: 160 ---RRSRFEGEDLTGISGLHFHTLCEHNVDA-LERTLRVFEEKFGSFLKGMTWVNFGGGH 215 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 I LI + ++ LEPG + + GILV V+ I D Sbjct: 216 HITRPD----YDVEQLCRLILDFKRRYSLQVYLEPGEAVALNAGILVATVLDIV-QNDMP 270 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +LD ++ M L Y ++ + G C GD Sbjct: 271 IAVLDTSVPCHMPDVLEMPYRPEVACTGLPQEKA-YTYRLTGQSCLAGDVAGEYSFDRPL 329 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN--GSQFHIIR 402 G L Y V++ T+N L + + +IR Sbjct: 330 HLGQRLAFLDMAHYTMVKTNTFNGVALPDIALYDHRNDSVQVIR 373 >gi|198434976|ref|XP_002131383.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Ciona intestinalis] Length = 551 Score = 133 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 69/391 (17%), Positives = 136/391 (34%), Gaps = 47/391 (12%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + K Y+ + F + YA+K N ++ ++K L LG+G D S+ E+R+ Sbjct: 40 FFICDLGDVMKKYIRWQKNFPR--VIPHYAIKCNPDEILLKMLIGLGTGFDCASKSEIRQ 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA E+I+F+ K + A + + ++ EL + + + I Sbjct: 98 MLALGARPEQIIFANPCKQASHVRYARDNNVKRIVFDNVEELIKMKKNFPTADLVLRI-- 155 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + K+G L A + + + G+ H+GS ++ Sbjct: 156 --------QTDDSQSICRFSMKYGAHPDVCKQLLDTAHKM-NLNVVGISFHVGSGCQDVQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI----HQYF 264 +F KA + R L G+ + +D+GGG + + + ++ Sbjct: 207 AFVKALQNARVLFDYAECIGYKLNLLDIGGGFPGTEDVNLKFEEIASVVNMTLKELFPME 266 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIK-----------------------------K 295 +I EPGR+ A L + +I+ + Sbjct: 267 EFPHVDVIAEPGRYFAASAYTLASNIIAKREVMRDVTEETVCEQTGHTDTIENRSSPTRC 326 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD-RLHIHADIVGPICETGDFIALN 354 ++ + YD H ++ + + + + GP C+ D I Sbjct: 327 DEPAYMYYINDGLYGSFNCLFYDHAHVTPKLLKEPSEIDMLYSSSVWGPTCDGLDRICEL 386 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 ++ G+ + E GAY ++N Sbjct: 387 VQLPQLDVGNWILWEDMGAYTMAAGSSFNGF 417 >gi|325265253|ref|ZP_08131978.1| carboxynorspermidine decarboxylase [Clostridium sp. D5] gi|324029432|gb|EGB90722.1| carboxynorspermidine decarboxylase [Clostridium sp. D5] Length = 375 Score = 133 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 64/388 (16%), Positives = 121/388 (31%), Gaps = 21/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP Y +E N + + + + A KA S V + H +G Sbjct: 4 EELRTPVYLVDEAILENNLKILAKVQEETGSRILLAQKAFSMYHVYPMIRHYLAGATASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R A + E VFS + +L FN ++ E Sbjct: 64 LYEARLAAE-EMGGENHVFSPAYTAKEMQELCGICDHISFNSIAQLERHRA--------- 113 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + ++A +E S L K+ + Sbjct: 114 -----LWESNGVSAGLRINPEHSTQEGHPIYDPCAPGSRLGIRRELFPGKLPKGVEGLHI 168 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + + ++ H ++ +++GGG I + Sbjct: 169 HTLCEQDAAPLVETFEAVEEKFGEYLHQLKWLNLGGGHHITRPGYDLDTLKDLLCRIRDT 228 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 Y Q ++ LEPG + + G L+T+V+ I ++ +ILD + M L Y Sbjct: 229 Y----QVQVYLEPGEAIALNAGYLITEVMDIV-ENERPVLILDASAACHMPDVLEMPYRP 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 G++ + + C GD I P G+ L E Y V++ T+ Sbjct: 284 PLKDSGMPGEKP-VTCTLACRTCLAGDVIGDYSFDMQPGIGERLVFEDMAIYTMVKNHTF 342 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 N L ++ + + +++ Sbjct: 343 NGMPLPDIALLRKDGRCEVVKQFGYKDF 370 >gi|290999347|ref|XP_002682241.1| predicted protein [Naegleria gruberi] gi|284095868|gb|EFC49497.1| predicted protein [Naegleria gruberi] Length = 430 Score = 133 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 70/391 (17%), Positives = 127/391 (32%), Gaps = 41/391 (10%) Query: 23 HVVQT---PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 + T PFY + + T+ YA+K N N + L LG G D Sbjct: 40 DELPTIEEPFYVVDLSEVLGQVKTWREELPR--VTPFYAIKCNPNPQFLSVLEKLGCGFD 97 Query: 80 IVSEGELRRALAAPVPAE----RIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 + S E+ R + R +++ I + A SG+ ++ EL L + Sbjct: 98 VASRDEIERVKHVITNNDELANRCIYANPCHPISHLRYARTSGVQYTTADNIDELYKLKK 157 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 I T S + KFG + + L + ++G Sbjct: 158 YWPEAQIVIRI----------KTDDSHSLCQFSTKFGAELSVAFEMVDIIKDLG-LNLAG 206 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 V H+GS + + SF KA + R + + + GG H + Sbjct: 207 VSFHVGSGCNDVNSFIKAIRDARAVFDYGFKVLNKKLWLLDLGGGWQGRSQKHGNAAFIS 266 Query: 256 YASLIHQ-----YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 A I + +II EPGR++ L+T + S + + + + Sbjct: 267 VARTIKPLLDELFPVESGTQIIAEPGRYIAHSTHTLITSIFSRRIEKSRVLYYIYEGVYH 326 Query: 311 FMRPTLYDAYHEINYIVNPAG--------------DRLHIHADIVGPICETGDFIALN-R 355 ++D ++ + G C++ D I + Sbjct: 327 SFNCLIFDHAEPELKFLSYEELISDNVTDEVENRVGHSDKAVTLYGSTCDSMDVIIKDSH 386 Query: 356 KIAL-PRPGDLLYIEKTGAYGAVQSGTYNSR 385 ++ GD++++E+ GAY S +N Sbjct: 387 QLPNCLECGDVIFVEEFGAYTNSASTEFNGF 417 >gi|253581175|ref|ZP_04858433.1| carboxynorspermidine decarboxylase [Ruminococcus sp. 5_1_39B_FAA] gi|251847532|gb|EES75504.1| carboxynorspermidine decarboxylase [Ruminococcus sp. 5_1_39BFAA] Length = 373 Score = 133 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 71/390 (18%), Positives = 121/390 (31%), Gaps = 25/390 (6%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + +QTP Y + +N + + A KA S A+ + +G Sbjct: 3 INQLQTPCYVIDEKKMRENLEILKKVQEDTGCKILLAQKAFSGFALYPMIGKYLAGTTAS 62 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E R + E VFS +T D +L FN + +LK + Sbjct: 63 GLFEARLGYE-EMGKENHVFSPAYRTEDIEELDRICDHIIFNSTA--QLKKFKEVCTGAS 119 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I + + H + G+ L + Sbjct: 120 LGLRINPECSTQGD---HAIYDPCAPGSRLGVTRENFDGEC-----LKWIDGLHFHTLCE 171 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E +A + ++ + +++GGG I + I Sbjct: 172 QNADDLEKTLQAVE------EKFGEFLSEVSWLNMGGGHHITREDYNVKL----LEKCIQ 221 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 I LEPG + + G LVT+V+ I + +ILD + M L Y Sbjct: 222 HMKETYDLDIYLEPGEAVALNAGYLVTEVMDIV-ENEIRTLILDASAACHMPDVLEMPYR 280 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 AG++ + C GD I + GD LY Y V++ T Sbjct: 281 PPLKDSGEAGEKA-YTYRLSSCTCLAGDVIGDYSFDREIQIGDKLYFMDMAIYSMVKNNT 339 Query: 382 YNSRLLI-PEIMVNGSQFHIIRPRMTFQEL 410 +N L +M + +IR +++ Sbjct: 340 FNGMPLPDIAVMHEDGECEVIRH-FGYEDF 368 >gi|73974237|ref|XP_858697.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 9 [Canis familiaris] Length = 434 Score = 133 bits (333), Expect = 8e-29, Method: Composition-based stats. Identities = 77/366 (21%), Positives = 125/366 (34%), Gaps = 17/366 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQIKP--FYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKIGVNTMTCDNEVELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +D+GGG L + Sbjct: 207 VYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVIS-PLLDVYFPEGSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSAD---KTFVILDVAMNDFMRPTLYDAYHEINY 325 KII EPG + V+ L +I+ K+ D + + D F D Sbjct: 266 IKIISEPGSYYVSSAFTLAVNIIAKKELHDEPAFMYYMNDGIYGSFASKLSEDLNTIPEV 325 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D + + GP C+ D I + + GD L + GA + +N Sbjct: 326 HKKYKKDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAFNDF 385 Query: 386 LLIPEI 391 Sbjct: 386 QRPAIY 391 >gi|302670560|ref|YP_003830520.1| carboxynorspermidine decarboxylase NspC [Butyrivibrio proteoclasticus B316] gi|302395033|gb|ADL33938.1| carboxynorspermidine decarboxylase NspC [Butyrivibrio proteoclasticus B316] Length = 408 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 68/408 (16%), Positives = 122/408 (29%), Gaps = 27/408 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP Y +++N + A KA S +A +G Sbjct: 4 DNIKTPAYVIDEKKLKENLEILDRVQRESGARILLAQKAYSVYQTYPLIARYLTGATASG 63 Query: 83 EGE---------LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 E L E V+ + + +L FN ++ E Sbjct: 64 LFEARLAHEEMKLSEQDDHEKKIENHVYEPAFEDDEMEELCNICDHIVFNSLNQLEHHRK 123 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK----------EDKFGIPIHQIHSLYA 183 + + + R+NP+ + +I + +P + Sbjct: 124 TWESAVRDGRVSVGLRINPEFSTQEEHEIYDPCSEGSRLGIKLADMPDELPEGVEGIHFH 183 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + H+ + + + +G I+ I++GGG Sbjct: 184 TLCEQDFEPLKQTFHHVEENFGKFFPTKDHTDESANDNNEHG-SGRKIKWINLGGG---- 238 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 +H + + I ++ LEPG + D G LVT ++ I K+ +I Sbjct: 239 HHITREDYNVDGLITFIKDIKKKYDIEVYLEPGEAIALDAGYLVTTIMDIVKTERMPVLI 298 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 LD + M L Y G+ L + + C GD I G Sbjct: 299 LDTSAACHMPDVLEMPYRPPLRDSEQPGE-LEFNYRLSSRTCLAGDIIGDYSFDHELHIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIRPRMTFQEL 410 D L E Y V++ T+N L IM + +IR + + Sbjct: 358 DRLVFEDMAIYSMVKNNTFNGMPLPDIDIMHENGKIDVIRK-FGYDDF 404 >gi|212632996|ref|YP_002309521.1| Vibrioferrin biosynthesis protein PvsE [Shewanella piezotolerans WP3] gi|212554480|gb|ACJ26934.1| Vibrioferrin biosynthesis protein PvsE [Shewanella piezotolerans WP3] Length = 412 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 79/370 (21%), Positives = 138/370 (37%), Gaps = 26/370 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y ++ + A + + YA KAN V++ LA + G++ S GEL Sbjct: 23 AYIYDLEQLKNHASAMMAALP-SNCQLYYAAKANPEAEVLQVLAPIVDGVEAASGGELNW 81 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 P ++F G GK + E+ A+ + +VES +EL+ + + I Sbjct: 82 IHQCQ-PQVPLIFGGPGKLVSELSQAIDLDVDAIHVESLTELQRITALCRQKQRHCRILL 140 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG------VKISGVDMHIGS 202 R+N + +++ G K FGI ++ + A +P V++ G H+ S Sbjct: 141 RMNISLEGIAETRLTMGGKPTPFGIDAAELDTAMAIVRDIPTLAGKPLVELLGFHFHLMS 200 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + KL ++ N+ ++VGGG+G+ Y + + + Sbjct: 201 HQLDVGRHLALMKLYFSTYKKWCQKYSLNLPMLNVGGGIGVNYSDPQQIFDWKHFCMELE 260 Query: 262 QYFGNLQCKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q + + E GRF+ A +G V +V+ IKK+ + F I + F P Sbjct: 261 TLIKQNQMEAVNIRFECGRFVTAAMGYYVMQVLDIKKNHGQWFAIGHGGTHHFRTPAAQA 320 Query: 319 AYHEINYIVNPA--------------GDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 H + + IVG +C D +A + + D Sbjct: 321 HDHPFFVLAAKDIGIELEQAETKITTTNLKSELVTIVGQLCTPKDVLATQQYVERLAVDD 380 Query: 365 LLYIEKTGAY 374 L GAY Sbjct: 381 YLVFSHAGAY 390 >gi|320529222|ref|ZP_08030314.1| carboxynorspermidine decarboxylase [Selenomonas artemidis F0399] gi|320138852|gb|EFW30742.1| carboxynorspermidine decarboxylase [Selenomonas artemidis F0399] Length = 380 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 102/388 (26%), Gaps = 24/388 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y + N + V A K S + +G Sbjct: 13 AAVPTPSYLVYEELLTHNLEILKGIAEHTGAKVLLAQKCFSMYYYYPLIGRYLAGTTASG 72 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + + E VF + + LA FN S+ E RA Sbjct: 73 IYEARLSQE-EMGKENHVFKPAYEAEEITALAAICDHIVFNSFSQWERFGAAARAQGASC 131 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + +A + K + + Sbjct: 132 GIRINPERSTQEHAIYDPCAPGSRLGVKIAEFPETLPEGIDGLHFHTLCE---------- 181 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + L + ++ + H ++ ++ GGG I Sbjct: 182 -----QGADALAVTLAAVEEKFGNYLHGLKWLNFGGGHHITRADYDIALLEELI----RH 232 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + LEPG + + G L V+ ++ + P + + + Sbjct: 233 VQETYDVAVYLEPGEAVALNAGYLAASVLDVRADGNVILNTSAACHM----PDVIEMPYR 288 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + GP C GD I A PGD + Y V++ T+ Sbjct: 289 PPVVGAGEAGEKAHTYTLAGPTCLAGDTIGTYSFDAPLAPGDRVVFGDMAIYTMVKNNTF 348 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 N L + V+ S I +++ Sbjct: 349 NGMPLPHIVAVDPSGAWEIVRSFGYEDF 376 >gi|152996197|ref|YP_001341032.1| ornithine decarboxylase [Marinomonas sp. MWYL1] gi|150837121|gb|ABR71097.1| Ornithine decarboxylase [Marinomonas sp. MWYL1] Length = 388 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 82/376 (21%), Positives = 146/376 (38%), Gaps = 20/376 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A TPF T I++ Y + F D + YA+KAN ++ L GS D+ Sbjct: 21 AETKDTPFVVIDTDIIDEAYTELTKGFPVAD--IFYAIKANPAPEILTLLRDRGSNFDVA 78 Query: 82 SEGEL-RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S EL + + +++ + K ++ + G+ F +S E N + Sbjct: 79 SRYELDKLFAIGGISPDQVSYGNTIKKAKDVRYFYEKGVRMFATDS--EADLRNIAKAAP 136 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 G + + + A KFG L A L + G+ H+ Sbjct: 137 GSRVYVRILTEGTVTA-------DWPLSRKFGCRPDMAMDLLVLAKELGLI-PYGISFHV 188 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYA 257 GSQ I ++ A ++ + ++L+ ++ I++GGG Y + ++ + Sbjct: 189 GSQQRDIGAWDAAIASVKVIFERLKEEDGIVLEMINMGGGFPANYIARTNDLATYAEEIT 248 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + + FG +IILEPGR L+++ G+LV++V+ I + + + Sbjct: 249 RFLEEDFGTDLPRIILEPGRSLISNAGVLVSEVVLISRKSHTALNRWVFTDVGKFSGLIE 308 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAY 374 I Y ++ I GP C++ D + N K + L GD +Y TGAY Sbjct: 309 TLDESIKYPIHVEKGGELEEVIIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAY 368 Query: 375 GAVQSG-TYNSRLLIP 389 S +N + Sbjct: 369 TTTYSAVEFNGFPPLA 384 >gi|218132554|ref|ZP_03461358.1| hypothetical protein BACPEC_00413 [Bacteroides pectinophilus ATCC 43243] gi|217992280|gb|EEC58283.1| hypothetical protein BACPEC_00413 [Bacteroides pectinophilus ATCC 43243] Length = 420 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 53/406 (13%), Positives = 111/406 (27%), Gaps = 23/406 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 V+TP Y + N ++ + A K S + G S Sbjct: 13 VKTPAYVVDERLLRDNLEILADVIKDTGCRILLAQKGFSMFCEYPLIGRYLCGTTASSLY 72 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R + E +F+ + + + FN + Sbjct: 73 EARLGKE-HMQGETHIFAPAYREEEFPQILSVCDHVVFNSLEQWIKFRTKVWECDNRGVV 131 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI---- 200 P F ++ + + + S G + + + A + G ++ + + Sbjct: 132 PAPFMMDVHGDEHASQVHSCGIRVNPGYAEVEHEIYNPCCAGSRLGSTLAEFEETLSKYP 191 Query: 201 ---------GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 ++ ++L ++ ++ GGG I Sbjct: 192 DALDGISGLHFHALCEQNSDTLERVLDHFLDSFGKYIEGMKWVNFGGGHHITRKDYDIEL 251 Query: 252 SSSDYASLIHQYFGNLQCKI------ILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + ++ + + V DV + + T VILD Sbjct: 252 LKKCIRRVQDEFGVTVYLEPGEAVALNTGYLVSTVLDVQNKTFYTTDGDREVEMTPVILD 311 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 + M L Y G++ + + G C GD I A + GD Sbjct: 312 TSAACHMPDVLEMPYRPYILDSGMPGEK-QYNYRLGGNTCLAGDIIGDYSFDAPLKAGDR 370 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 L Y V++ T+N L + + +++ +++ Sbjct: 371 LVFTDMAHYSMVKNNTFNGIGLPAIAACDMDGRLRVVKE-FGYEDF 415 >gi|169774753|ref|XP_001821844.1| ornithine decarboxylase [Aspergillus oryzae RIB40] gi|238496649|ref|XP_002379560.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357] gi|83769707|dbj|BAE59842.1| unnamed protein product [Aspergillus oryzae] gi|220694440|gb|EED50784.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357] Length = 425 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 82/372 (22%), Positives = 132/372 (35%), Gaps = 31/372 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF + Y +++ D YA+K N + +IK L + SG D S E+ Sbjct: 52 PFCVMDLGYVYNEYQRWTSLLP--DVKPFYAVKCNPDTHIIKVLNAMNSGFDCASRNEME 109 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ++ V ERI+F+ K I +++ A QSG+ ++E+EL+ + QR Sbjct: 110 LVMSQGVAPERIIFANPCKKISDLEYAQQSGVRKMTFDNEAELQKIRQRFPDAQLILRCL 169 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 +T KFG L A + + GV HIGS Sbjct: 170 ----------ASDPSATYSLGSKFGASSATSVKLLQCAKSWGLS-VVGVSFHIGSNAKDP 218 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +F KA + R++ GH++ +D+GGG +S I +YF + Sbjct: 219 TAFDKAIQNSREVFDAGLRTGHDMHLLDIGGGFSAHNFDAM----ASSIRQCIGKYFCGI 274 Query: 268 QCKIILEPGRFLVADVGILVTKV--------ISIKKSADKTFVILDVAMNDFMRPTLYDA 319 +I+ EPGR+ A L + K + D F+ Sbjct: 275 DVEIVAEPGRYFAAGALTLACGIIGRRDAAANDEDKENRHMLYLNDGVYGTFICNIFEPG 334 Query: 320 YHEIN-----YIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGA 373 + + I GP C+ D +A + + D LY + GA Sbjct: 335 PQPKVLRASGDFYPLDSEDEYERYTIWGPTCDGTDCVAESVALPKSLAIDDWLYFPEMGA 394 Query: 374 YGAVQSGTYNSR 385 Y S +N Sbjct: 395 YSTCLSTGFNGF 406 >gi|224539564|ref|ZP_03680103.1| hypothetical protein BACCELL_04469 [Bacteroides cellulosilyticus DSM 14838] gi|224518820|gb|EEF87925.1| hypothetical protein BACCELL_04469 [Bacteroides cellulosilyticus DSM 14838] Length = 386 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 58/385 (15%), Positives = 112/385 (29%), Gaps = 17/385 (4%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 +P Y + KN + D + A K+ + S Sbjct: 13 FPSPCYIMDEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIEHSTASSVY 72 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R AL + + + S S+ V G Sbjct: 73 EARLALEEFGSKAH---TYSPAYTEADFPEIMRCSSHITFNSLSQFCRFYPEVVKEGSGI 129 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 R+NP+ + + + +FG+ + L + Sbjct: 130 SCGIRINPEYSEVETELYNPCAPGTRFGMT-----------ADLLTEVLPQGIEGFHCHC 178 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 S ++ + L+ L ++ I+ +++GGG + Sbjct: 179 HCESSSYELERTLKHLEEKFSRWFPQIKWLNLGGGHLMTRKDYDVEHLIQLL---KDLRA 235 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +IILEPG G+LV++V+ I S IL+V+ M L Y Sbjct: 236 RYPHLRIILEPGSAFTWQTGVLVSEVVDIVVSRGIRTAILNVSFTCHMPDCLEMPYQPAV 295 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 + + G C +GD++ + G+ + E Y V++ +N Sbjct: 296 RGAEIGNNGGCHVYRLGGNSCLSGDYMGDWSFDHELQIGERIVFEDMIHYTMVKTNMFNG 355 Query: 385 RLLIPEIMVNGSQFHIIRPRMTFQE 409 M + I + ++++ Sbjct: 356 IHHPAIAMWTKERKADIFKQFSYED 380 >gi|307107455|gb|EFN55698.1| hypothetical protein CHLNCDRAFT_133981 [Chlorella variabilis] Length = 527 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 76/375 (20%), Positives = 135/375 (36%), Gaps = 31/375 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY Y+ +E+ + + CYA+K N ++ ++ LA LG+G D SE EL R Sbjct: 154 FYVYNLAVVERLHAAWVRLMPR--VHPCYAVKCNPDEGLLAVLASLGAGFDCASEAELAR 211 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V +R+V++ K +I A G+ +SESEL + Q G I Sbjct: 212 VLALGVAPDRLVYAHPCKPPKQIRWAQAHGVDLTTFDSESELAKMAQHHPGSGLLLRIR- 270 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + + +K+G + + L A+ L +++ GV H+GS Sbjct: 271 ---------ADDPAARCQLGNKYGAELACVPRLLEAAAGLG-LRVRGVSFHVGSGAKNPA 320 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ-----Y 263 +F A + R + + G + +D+GGG I+ + Sbjct: 321 AFSAAIEAARRVFDLGAALGFRMDVLDLGGGFCGGEVGPDGHVDLGGVPDAINVALDRLF 380 Query: 264 FGNLQCKIILEPGRFL---VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + + ++I EPGR+ A + + + + Sbjct: 381 PDDGELRVIAEPGRYFAEACATYACYINGWRGRAVEGGQQAYDYYITDGLYGSMNCLVYD 440 Query: 321 H----------EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 H + V D + + GP C+ D + + + R GD + + Sbjct: 441 HAELAPVGLRSPLLPPVAAGEDAALHPSTLFGPTCDGLDTVCRDVPMPRLRNGDWVLFPR 500 Query: 371 TGAYGAVQSGTYNSR 385 GAY + +N Sbjct: 501 FGAYTIAGAVNFNGF 515 >gi|291548849|emb|CBL25111.1| Diaminopimelate decarboxylase [Ruminococcus torques L2-14] Length = 408 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 79/411 (19%), Positives = 147/411 (35%), Gaps = 36/411 (8%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L++ + TP Y + +++ F G + +CYA+KAN +A Sbjct: 6 LQEASRKYGTPLYVFDLDILKEQTERIRAGF-GPEINLCYAMKANPFLT--GYMAQWSDR 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +++ S GE R VP E++ SGV K D+I L ES L Sbjct: 63 IEVCSMGEFRICRKLQVPPEKLFISGVMKKRDDIREILAYCGNRCAYTVESPLHFQYFVE 122 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 S R+ P + + ++FG+ + + A LPG++ G+ Sbjct: 123 WSEEHPEDGILRLYPRLTSG-----------NQFGMDEDTVLEILKKAKELPGIEAEGIH 171 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 G+Q ++ K L + ++ +++ ++ G G + Y D + + Sbjct: 172 YFSGTQKKNLKRHQKELTYLDEFLKKAAEEQIDVKCLEYGSGTAVPYFRDKTAETFEETG 231 Query: 258 S---LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + +E GR L A G +TKV K S + I+D + Sbjct: 232 LKGLQDAVKAMQWKGHVTVELGRALAAMCGYYLTKVEDTKTSDGIHYCIVDGGCHQINYD 291 Query: 315 TLYDAYHEINYIV------------NPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 +E V + + + G +C D + + Sbjct: 292 GQIKGMYEPYVKVLPKEVSMKDAEDSEDKNTEEKTWKVCGSLCTLNDVLCNEITLRGLEK 351 Query: 363 GDLLYIEKTGAYGAV--QSGTYNSRLLIPEIMVNGSQFHIIRPR---MTFQ 408 G +L E+TGAY A+ + + S L ++ + + I+ R T++ Sbjct: 352 GSILVFERTGAYSAMEGMA-LFLSHELPGVVLYSEEEGW-IQARVQQETYE 400 >gi|55978175|gb|AAV68696.1| LolD-2 [Neotyphodium uncinatum] Length = 415 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 68/372 (18%), Positives = 128/372 (34%), Gaps = 27/372 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + A D +A+K++ ++ +I+TLA G+G D S E+ Sbjct: 33 FFVADLNDVVRKWAAWKEALP--DVTPFFAVKSSYDRRLIQTLATCGAGFDCASTEEIEL 90 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ + AERI+F+ K + + L + GI ++E EL+ L+ + Sbjct: 91 ILSLGIGAERIIFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHHHYPEAQTVLRVF- 149 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + KFG L L S Sbjct: 150 ---------ADDPTNADPLGTKFGAARDDFDGLVRLVKELNMQLAGASFHAAPSVAVDAA 200 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ + + ++ + R G N +D+GGG + A G + Sbjct: 201 AYVRGIRDTAEVFARARQVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFKSEVGEGR 260 Query: 269 CKIILEPGRFLVADVGILVTKVISI--------KKSADKTFVILDVAMNDFMRPTLYDAY 320 +I+ EPG L KV++ + A + ++ + N MR + + Sbjct: 261 LRILAEPGTLFSCSPFYLAVKVVARRVNATAFGHEPATRLYINDGIYSNFMMRFIVNMTF 320 Query: 321 HEI------NYIVNPAGDRLHIHADIVGPICETGDFIALNRKI-ALPRPGDLLYIEKTGA 373 + + G C++ D I + ++ R GD L + GA Sbjct: 321 SPAAVIREGVWHDQADHTMRGEACSLWGRSCDSNDCINRDCRLGPEVRVGDWLVFKDMGA 380 Query: 374 YGAVQSGTYNSR 385 Y V + T+N Sbjct: 381 YTTVCNTTFNGF 392 >gi|34392272|emb|CAE46410.1| ornithine decarboxylase [Chlamydomonas reinhardtii] gi|34392274|emb|CAE46409.1| ornithine decarboxylase [Chlamydomonas reinhardtii] Length = 396 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 73/358 (20%), Positives = 130/358 (36%), Gaps = 27/358 (7%) Query: 42 LTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 + A + YA+K N ++K L LG+G D +GEL L V RI+F Sbjct: 22 QAWRAAMPR--VVPFYAVKCNPEPGILKLLNALGAGFDCACKGELDMMLRMGVSPNRIIF 79 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKK 161 + K +I A + + ++ SEL + Q I Sbjct: 80 AHPCKRASDIRYAREHNVQYTTFDTVSELHKIAQMNPDFKCVLRIR----------ADDP 129 Query: 162 ISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT 221 + K+G + + L A L +++ GV H+GS + +F A R + Sbjct: 130 DARVPLGLKYGAEVSEADVLLRTAKELG-LQVVGVSFHVGSACQNLSTFSGAIVNARKVF 188 Query: 222 QQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH----QYFGNLQCKIILEPGR 277 + + G N++ +D+GGG + ++ + + ++I EPGR Sbjct: 189 DEAGALGFNMELLDIGGGFTGHFDEMGNVMFGVIANTINAALATNFPPEMGVRVIAEPGR 248 Query: 278 FLVADVGILVTKVISIKKS-----ADKTFVILDVAMNDFMRPTLYDAYHEINYIVN---- 328 + L+T V + + K L + LYD + +V Sbjct: 249 YFAETSSTLLTPVYGQRDRVAADGSVKKDYWLTDGLYGSFNCILYDGQNPGYKVVRSPLM 308 Query: 329 -PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + D + + GP C++ D + + + + R GD L GAY + +N Sbjct: 309 ADSTDSRTFLSTLWGPTCDSADCVYKDVTLPVLRNGDWLMWNNAGAYTVAGACDFNGI 366 >gi|291520960|emb|CBK79253.1| carboxynorspermidine decarboxylase [Coprococcus catus GD/7] Length = 374 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 60/379 (15%), Positives = 105/379 (27%), Gaps = 22/379 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y I N V A KA S ++ + SG E Sbjct: 7 PTPCYVVDEGRIRHNLEILQQLEKDTGCHVLLAQKAFSMYSLYPMIGRYISGTTASGLYE 66 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 R + E VF+ K D +L FN ++ E + G Sbjct: 67 ARLGYE-EMGKENHVFAPAYKEADMQELVTICDHIIFNSFAQYE--KYKDICQAKGVSVG 123 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I G L L + Sbjct: 124 IRVNPQCSTQEGHDIYDPCGYASRLGVTKAQFPEVLPEGIEGLHFHTLCE---------- 173 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 ++ + ++ H I+ +++GGG +H + LI Sbjct: 174 --QNADDLVTTFQAFEEKFGKYLHCIKWLNLGGG----HHITRKDYQYETLVKLIRYIRD 227 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + LEPG + + G +VT+V+ I + +++ P + + + Sbjct: 228 TYHMTVYLEPGEAVALNAGYMVTEVMDIVH--NDMDILILDVSAACHMPDVLEMPYRPPL 285 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 ++ + C GD I + GD L E Y V++ T+N Sbjct: 286 SGGYEANQKPYTYRLSSMTCLAGDVIGDYSFEKPVQIGDRLVFEDMAIYSMVKNNTFNGM 345 Query: 386 LLIPEIMV-NGSQFHIIRP 403 L ++ ++R Sbjct: 346 PLPGIALLRENGNTEMVRK 364 >gi|316970259|gb|EFV54235.1| ornithine decarboxylase [Trichinella spiralis] Length = 389 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 64/373 (17%), Positives = 121/373 (32%), Gaps = 28/373 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + + + YA+K N N+ ++ LA +G D S+ E+ Sbjct: 19 FFLFDLGKLIRLHQRWIEHLPQI--HPFYAVKCNDNKLLLSLLASMGVNFDCASKNEIET 76 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ V ERI+F+ K I+ A + ++E EL+ ++ I Sbjct: 77 VLSIGVSPERIIFANPCKPRSAIEYANSQNVRYMTFDNEQELQKIHSLYPKSELLMRI-- 134 Query: 149 RVNPDINANTHKKISTGKKEDKFGI-PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 +T + E KFG PI + L A L + + Sbjct: 135 --------STFNYNAVISFEKKFGCNPITEAPELLKKAIVLGCKVVGIWSG--CRESSAY 184 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + + L DL Q + + + +L + ++ Sbjct: 185 TNSIANARKLFDLGNQFGCPLKLLDIGGGFSAVHENGALPFESLAMEINQALSFYFPSDM 244 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKT-------------FVILDVAMNDFMRP 314 +I EPGR+ A L T+VI +K A ++ + Sbjct: 245 NVTVIAEPGRYYAAKPFQLCTRVIGYRKVAASKITENPADDADIGFMYFINDGIYGSFNC 304 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 L + ++ + + G C++ D I ++ +LL + GAY Sbjct: 305 ILTENTVPQGQLLKKRKASKTYWSTVWGQTCDSLDIILKKCQLPELFENELLLFQNMGAY 364 Query: 375 GAVQSGTYNSRLL 387 S +N Sbjct: 365 SLTVSTEFNGFSR 377 >gi|134094073|ref|YP_001099148.1| putative carboxynorspermide decarboxylase [Herminiimonas arsenicoxydans] gi|55977154|gb|AAV68371.1| putative carboxynorspermide decarboxylase [Herminiimonas arsenicoxydans] gi|133737976|emb|CAL61021.1| Carboxynorspermidine decarboxylase [Herminiimonas arsenicoxydans] Length = 365 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 63/388 (16%), Positives = 118/388 (30%), Gaps = 31/388 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y +A+ +N + V ALK + +V + G S E+ Sbjct: 4 TPYYLIDKSALLRNLQVIDQVRERSGAKVLLALKCFATWSVFDLMQQYMDGTTSSSLYEV 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ FN S+ + S P Sbjct: 64 KLGHQ-KFGGETHAYSVAFADHEIDEVVAHCDKIIFNSISQFQRF------SSHAGNKPK 116 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP ++ + + + G I +D + + Sbjct: 117 GLRLNPGVSCASFDLADPARPFSRLGESDPARILSI----------IDQLDGVMIHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F + LL ++ Q+ H + + +GGG+ S + + ++ Sbjct: 167 NRDFERFDALLTEVEQRYGEILHRLSWVSLGGGISFTTPG----YSIDAFCERLRRFAQT 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG V D L V+ I + V+ + +Y I Sbjct: 223 YDVQVYLEPGEATVRDTTTLEVSVVDIGFNGKNLAVVDSSTEAHMLDLLIYRETAPI--- 279 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + I G C GD R + GD + I G Y V+ +N Sbjct: 280 ---KNAQGDHAYQICGKTCLAGDIFGEARFEQPLQIGDRISIGDAGGYTMVKKNWFNGVH 336 Query: 387 LIPEIMVN--GSQFHIIRPRMTFQELIE 412 + I + +R +F + + Sbjct: 337 MPA-IAIKEADGSVRAVRE-FSFDDYVS 362 >gi|296270931|ref|YP_003653563.1| Orn/DAP/Arg decarboxylase 2 [Thermobispora bispora DSM 43833] gi|296093718|gb|ADG89670.1| Orn/DAP/Arg decarboxylase 2 [Thermobispora bispora DSM 43833] Length = 362 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 84/374 (22%), Positives = 130/374 (34%), Gaps = 25/374 (6%) Query: 18 LEKLAHVVQT-PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 + +A + P Y Y + ++ +A T + YA+KAN + V++ LA Sbjct: 5 VRAIAESLGEIPAYVYDLDGLRRHAAAVRDAM--TGTQIHYAVKANPDPKVLRALAPYVD 62 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G ++ S GE +R P + F G GKT DE+ LA + Sbjct: 63 GFEVASAGEFQRVTEVV-PGMPVSFGGPGKTTDELALAPLVHRWHVESP---------AE 112 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 L A I RVN + G FG+ + T ++ GV Sbjct: 113 LRRLTGPADILLRVNLGVPVEGAALTMGGGA-TPFGMDPEGVAECLRLLPTS-RARLRGV 170 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+ S +D A +L G + ++GGG+ + Y + Y Sbjct: 171 HAHLASGLDAPALLEIARAVLEYG------RGLGVAEFNLGGGMAVDYRRPGNRFDWAAY 224 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + + + I EPGR L A G +T VI +K+ + F +L + P Sbjct: 225 GEGLRRLAAPGETLRI-EPGRALTAYCGWYLTTVIDVKRVHGERFAVLSGGTHHLRTPVT 283 Query: 317 YDAYHEINYIVNPAGDRLH-IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 I AG R +VG +C D A A PGD++ GAY Sbjct: 284 KGHDQPFTVIHRGAGGRPEPEPVTLVGRLCTPKDVFARRVP-ASLAPGDVVAFAMAGAYA 342 Query: 376 AVQSGT-YNSRLLI 388 S + Sbjct: 343 WNISHHDFLMHPKP 356 >gi|148285652|gb|ABQ57519.1| LolD [Neotyphodium coenophialum] Length = 415 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 68/372 (18%), Positives = 128/372 (34%), Gaps = 27/372 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + A D +A+K++ ++ +I+TLA G+G D S E+ Sbjct: 33 FFVADLNDVVRKWAAWKEALP--DVTPFFAVKSSYDRRLIQTLATCGAGFDCASTEEIEL 90 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ + AERI+F+ K + + L + GI ++E EL+ L+ + Sbjct: 91 ILSLGIGAERIIFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHHHYPEAQTVLRVF- 149 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + KFG L L S Sbjct: 150 ---------ADDPTNADPLGTKFGAARDDFDGLVRLVKELNMQLAGASFHAAPSVAVDAA 200 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ + + ++ + R G N +D+GGG + A G + Sbjct: 201 AYVRGIRDAAEVFARARQVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFKSEVGEGR 260 Query: 269 CKIILEPGRFLVADVGILVTKVISI--------KKSADKTFVILDVAMNDFMRPTLYDAY 320 +I+ EPG L KV++ + A + ++ + N MR + + Sbjct: 261 LRILAEPGTLFSCSPFYLAVKVVARRVNATAFGHEPATRLYINDGIYSNFMMRFIVNMTF 320 Query: 321 HEI------NYIVNPAGDRLHIHADIVGPICETGDFIALNRKI-ALPRPGDLLYIEKTGA 373 + + G C++ D I + ++ R GD L + GA Sbjct: 321 SPAAVIREGVWHDQADHTMRGEACSLWGRSCDSNDCINRDCRLGPEVRVGDWLVFKDMGA 380 Query: 374 YGAVQSGTYNSR 385 Y V + T+N Sbjct: 381 YTTVCNTTFNGF 392 >gi|126699417|ref|YP_001088314.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile 630] gi|115250854|emb|CAJ68678.1| Pyridoxal-dependent decarboxylase, group IV decarboxylase family [Clostridium difficile] Length = 403 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 98/376 (26%), Positives = 156/376 (41%), Gaps = 33/376 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y T I + N G D Y++K N ++K++A G G D S E+ Sbjct: 15 PCYIYDETNIIEKCKELKNNILGFDF--LYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 72 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + V + I +S GKT +I+ L +S +E++ +N+ + +K I Sbjct: 73 ISSKCGVSKDDIYYSSPGKTEIDIETVL--DKCIIIADSITEIELINKISKKHNQKVKIG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NPD K KFGI I + S++ S V + G+ +HI SQ+ Sbjct: 131 IRINPDF-----TMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDF 185 Query: 208 ESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 E ++ + +S NI+ I+ G GLG+AY + P + S + Q Sbjct: 186 EKLGHYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIAF 245 Query: 267 LQCKII-----LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +E GRF+V G K++ IK S K ++I+ +N FMRP + + Sbjct: 246 TNSNTLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIE 305 Query: 322 EINYIVNPAGDRL------------------HIHADIVGPICETGDFIALNRKIALPRPG 363 I V G + ++VG +C + D IA N K+ G Sbjct: 306 NITCGVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLKKANIG 365 Query: 364 DLLYIEKTGAYGAVQS 379 DL+ I G+Y S Sbjct: 366 DLISISNAGSYSYSLS 381 >gi|149180385|ref|ZP_01858890.1| probable diaminopimelate decarboxylase protein [Bacillus sp. SG-1] gi|148852577|gb|EDL66722.1| probable diaminopimelate decarboxylase protein [Bacillus sp. SG-1] Length = 398 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 75/373 (20%), Positives = 141/373 (37%), Gaps = 17/373 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y + ++ ++ + YA+KAN + +++ L+ + G D SEGE+ + Sbjct: 24 AYVYDLKGLREHARRLKDSLPAF-CSLYYAVKANPDNRILEALSGIVDGFDTASEGEILK 82 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 ++F+ K E+ + NVESE +L LN+ GK P+ Sbjct: 83 VHKLSALP--VIFAAPAKKDRELAYLADGSLRFMNVESERDLYRLNRVGKEAGKALPVLI 140 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+N N ++ +FGI +I S+ S P ++++G H S E Sbjct: 141 RINLQHNV-SNSSHKMSGVPTQFGIEERKIPSILEKLSEFPYIELNGFHFHAMSNNLNAE 199 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA----SLIHQYF 264 K + + + + + GG + + + + + F Sbjct: 200 EHLIFVKRCLEKSLEWKKTFSLDLGVVNIGGGIGVNYENPSESFDWTFFSEGLHQMQEEF 259 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 Q ++I+E GR+L A G +T+VI +K++ D+ F ++ + P + H + Sbjct: 260 EANQLELIMELGRYLTAQCGFYITEVIDLKQNYDEWFPLVRGGTHHLRLPAAWKMSHPFS 319 Query: 325 YIVNPAGDRLH--------IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 I G +C D + + + + GDL+ +GAYG Sbjct: 320 VYPVTEWKEAPLPRPAVKGERITIAGELCTPNDLLVRKQYVDDLKVGDLVMFHLSGAYGW 379 Query: 377 VQSGT-YNSRLLI 388 S + S Sbjct: 380 TISHHDFLSHPAP 392 >gi|238497239|ref|XP_002379855.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357] gi|220694735|gb|EED51079.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357] Length = 394 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 84/358 (23%), Positives = 135/358 (37%), Gaps = 30/358 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF+ + I + +L + ++ D YA+K NS+ ++ L LG D S+GE+ Sbjct: 35 PFFVADGSRIVEQHLRWKSSLP--DIQPFYAVKCNSDVNFLRYLDRLGVNFDCASQGEIE 92 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ V RI+F+ K+I + A + GI ++ EL+ + Q + +G I Sbjct: 93 LILSLGVDPSRIIFAHPCKSISALHFAAKQGIRWATFDNIDELEKVKQHSPQIGLLLRIF 152 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + DKFG P + +L A L ++I GV HIGS Sbjct: 153 ----------AEDDGAKVCLGDKFGAPWNTTVALLKRAREL-HLQIVGVSFHIGSGASDP 201 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 E+F A + R + Q G N+ +DVGGG A + FG+ Sbjct: 202 EAFTTAIQQARHVFDQGERLGFNMTVLDVGGGFQHTNFEFMASSLRPALA----REFGDR 257 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSAD------------KTFVILDVAMNDFMRPT 315 ++I EPGRF LV KVI+ + + + Sbjct: 258 PVRVIAEPGRFYATPCYTLVCKVIARRTHIGAAPSNPADMLYQNDGLYGCFSCGWSEGEE 317 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN-RKIALPRPGDLLYIEKTG 372 + N + + + GP C++ D IA + GD L + G Sbjct: 318 YMPVLVKQNEGRDDHRESGEHRYSLWGPTCDSIDQIAKEVVMDGEVKVGDWLVYKDMG 375 >gi|254293186|ref|YP_003059209.1| carboxynorspermidine decarboxylase [Hirschia baltica ATCC 49814] gi|254041717|gb|ACT58512.1| carboxynorspermidine decarboxylase [Hirschia baltica ATCC 49814] Length = 391 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 55/384 (14%), Positives = 112/384 (29%), Gaps = 17/384 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP + A+E+N + D + ALK + + T+ G+ S E Sbjct: 18 TPVFIVDKGALEENLAILKDVQDRSGAKILLALKGFAMWSFAPTIMKYLPGVTSSSTAEA 77 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R E + D +L FN ++++ + Sbjct: 78 RLGAE-EFGGEVHACAPAYSEADFRELLTLCDHIVFNSVNQAKRFLPIYEEAKANGGRKV 136 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 +F + + + K + + L G+ + Sbjct: 137 SFGLRVNHGHRETEVELYDPAAPKSRLGAPRDQIPTDGLEGLEGLHFHTLCEL------- 189 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + L + ++ ++ GGG I L+ + Sbjct: 190 --DSDSLERSLEVFERDFGDLIPGLKWLNFGGGHHITRPD----YDVERLVHLVKRIKEK 243 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + G+LVT+V+ I + + + P + + + + + Sbjct: 244 YGVEVYLEPGEAIAIRTGVLVTEVMDIMH--NAMDIAILDTSATAHMPDVLEMPYRPDIV 301 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + + G C GD + G L G Y V++ T+N Sbjct: 302 GGDEPNEKVHTYRLGGLSCLAGDVVGDYSFDKPLEIGQKLIFLDMGHYTMVKTSTFNGVR 361 Query: 387 LIPEIMVNGSQFHI-IRPRMTFQE 409 L + + I I R +++ Sbjct: 362 LPSIAIADPDTGKIEIVRRFGYED 385 >gi|26353042|dbj|BAC40151.1| unnamed protein product [Mus musculus] Length = 448 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 75/380 (19%), Positives = 122/380 (32%), Gaps = 30/380 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQTVVAQIKP--FYTVKCNSTPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I+F+ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEDGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKEYQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +D+GGG L + Sbjct: 207 VYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVIS-PLLDIYFPEGSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT----------------FVILDVAMNDFM 312 +II EPG + V+ L +I+ K + + + D F Sbjct: 266 IQIISEPGSYYVSSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFA 325 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 D D + + GP C+ D I + GD L + G Sbjct: 326 SKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVEGCLLPELNVGDWLIFDNMG 385 Query: 373 AYGAVQSGTYNSRLLIPEIM 392 A + +N Sbjct: 386 ADSFHEPSAFNDFQRPAIYF 405 >gi|291288495|ref|YP_003505311.1| carboxynorspermidine decarboxylase [Denitrovibrio acetiphilus DSM 12809] gi|290885655|gb|ADD69355.1| carboxynorspermidine decarboxylase [Denitrovibrio acetiphilus DSM 12809] Length = 386 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 70/391 (17%), Positives = 125/391 (31%), Gaps = 22/391 (5%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 +++ V+TP Y S I+ N + ALKA + AV ++ G+ Sbjct: 12 KEITGRVKTPCYLISRDVIKCNCELLDYVQKHTGAKILLALKAFAMPAVFPLISEYLHGV 71 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 E + E +S S FN S+ +L Sbjct: 72 CASGPIEAQMGREEFGR-EVHTYSPAFTDEQFERTVRYSDHIVFNSVSQWKLFK-----D 125 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + + RVNP + +FG+ L GV + G+D Sbjct: 126 KIPAEKEVGLRVNPGHAEVEVDLYNPCISGSRFGVNPAD----------LEGVDLKGID- 174 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + ++ ++L ++ ++ I+ GGG I Sbjct: 175 GLHFHAMCEQNSDVLVRILESFEKRFGHLIPQMKWINFGGGHHITRDDYDVDLLIETV-- 232 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + ++ LEPG +V + G+ VT V+ ++D + M L Sbjct: 233 -LSFRERYNGIRVYLEPGEAVVLNAGVFVTSVLDT-IKNGVDIAVMDCSAETHMPDVLAM 290 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 Y + AG + H + G C GDFI + GD L Y V+ Sbjct: 291 PYRPHLIEADEAGKKAH-TYKLGGISCLAGDFIGTYSFEHELKRGDRLVFTDMALYSFVK 349 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++N L + + S + R + + Sbjct: 350 NTSFNGVELPDLAVFDNSGAVEVVRRFGYAD 380 >gi|145640802|ref|ZP_01796384.1| diaminopimelate decarboxylase [Haemophilus influenzae R3021] gi|145274316|gb|EDK14180.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.4-21] Length = 105 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 R D+VGP+CET DF+ R+++ GD + GAYGA S YNSR E++ Sbjct: 22 REKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRARTAEVL 80 Query: 393 VNGSQFHIIRPRMTFQELIELDS 415 V+G Q ++IR R T QEL L+S Sbjct: 81 VDGDQSYLIRRRETLQELWALES 103 >gi|160885676|ref|ZP_02066679.1| hypothetical protein BACOVA_03680 [Bacteroides ovatus ATCC 8483] gi|156108489|gb|EDO10234.1| hypothetical protein BACOVA_03680 [Bacteroides ovatus ATCC 8483] Length = 408 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 72/416 (17%), Positives = 131/416 (31%), Gaps = 31/416 (7%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAV 67 + + +L FY + N++ + F + + Y+ K N Sbjct: 4 EMQINKTKIAELRKEYGDAFYLLDSGQFRNNFIELKDTFRKIYPNFNIAYSYKTNYTPKF 63 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 K + LG ++VSE EL AL V ++RI+++G K +++ L +G E Sbjct: 64 CKIVNELGGYAEVVSEMELEIALRVGVESKRIIWNGPIKNAKKLEEFLVAGGTDNIDSVE 123 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 K + R N D+ + + F + + + Sbjct: 124 ELAVVKAIAERHPDKVLNLGIRCNYDVQDGVVSRFGLDVDSEDFQQVLEFVITT------ 177 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY--- 244 V + + + + G + +DVGGGL Sbjct: 178 ------KNVHFINFQCHFAKRQIEYWSARAKGMVELIDRIGIIPERLDVGGGLFGKMADS 231 Query: 245 ---HSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGILVTKVISIKK 295 + P YA F + ++++EPG +V D V V +IK Sbjct: 232 LKAQFKNDIPDYQAYAEATATIFADYFADKNVKPELLIEPGSAVVGDCMKFVGTVKTIKC 291 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 K + + + + I + + D VG C GD + N Sbjct: 292 VRGKWMATVLGSQKNISMSG---INPPMEVITMGGEQKEYKDLDFVGFTCIEGDVLYNNY 348 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 L D + I G+Y V + P + + G + +I+ F +L Sbjct: 349 NGKLAHE-DAIVISNCGSYSLVMKPPFI-LPNFPVLDICGEKTEVIKRGEVFDDLF 402 >gi|255100982|ref|ZP_05329959.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile QCD-63q42] Length = 403 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 98/376 (26%), Positives = 156/376 (41%), Gaps = 33/376 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y T I + N G D Y++K N ++K++A G G D S E+ Sbjct: 15 PCYIYDETNIIEKCKELKNNILGFDF--LYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 72 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + V + I +S GKT +I+ L +S +E++ +N+ + +K I Sbjct: 73 ISSKCGVSKDDIYYSSPGKTEIDIETVL--DKCIIIADSITEIELINKISKKHNQKVKIG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NPD K KFGI I + S++ S V + G+ +HI SQ+ Sbjct: 131 IRINPDF-----TMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDF 185 Query: 208 ESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 E ++ + +S NI+ I+ G GLG+AY + P + S + Q Sbjct: 186 EKLGHYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIAF 245 Query: 267 LQCKII-----LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +E GRF+V G K++ IK S K ++I+ +N FMRP + + Sbjct: 246 TNSNTLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIE 305 Query: 322 EINYIVNPAGDRL------------------HIHADIVGPICETGDFIALNRKIALPRPG 363 I V G + ++VG +C + D IA N K+ G Sbjct: 306 NITCGVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNIKLKKANIG 365 Query: 364 DLLYIEKTGAYGAVQS 379 DL+ I G+Y S Sbjct: 366 DLISISNAGSYSYSLS 381 >gi|332214026|ref|XP_003256127.1| PREDICTED: antizyme inhibitor 1 [Nomascus leucogenys] Length = 448 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 73/378 (19%), Positives = 120/378 (31%), Gaps = 28/378 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQY 263 + A R + G + +D+GGG + P Y Sbjct: 207 VYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGV 266 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMR 313 + F +A I V + K + + + D F Sbjct: 267 KIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFAS 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 D D + + GP C+ D I + + GD L + GA Sbjct: 327 KLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGA 386 Query: 374 YGAVQSGTYNSRLLIPEI 391 + +N Sbjct: 387 DSFHEPSAFNDFQRPAIY 404 >gi|157108351|ref|XP_001650188.1| ornithine decarboxylase [Aedes aegypti] gi|108868550|gb|EAT32775.1| ornithine decarboxylase [Aedes aegypti] Length = 415 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 86/434 (19%), Positives = 149/434 (34%), Gaps = 33/434 (7%) Query: 1 MSAFKYFEGSLHA--ENVSLEKLAHVVQTPFYCYSTTAIEK--NYLTFSNAFDGMDTMVC 56 M + L + V+ ++L + +E+ + + Sbjct: 1 MDILSVLKSRLEIVDDAVTSKELVDR------LVARGPLEESLHLTEL-DTLHLPRVRPF 53 Query: 57 YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 YA+K+N ++++T LG G D S GEL+R L V ERI+F KTI+ ++LA + Sbjct: 54 YAIKSNDEPSIVETTILLGCGYDCASTGELKRILGFRVEPERIMFGQPMKTIESLELAKK 113 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 +SE EL+ ++Q D KFG Sbjct: 114 M-KLRTVFDSEDELRKIHQHYPEADVVIRFRLETAED----------PMNLGIKFGCEAD 162 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + G+ + G ++G ++F+ K ++LT S G ID+ Sbjct: 163 VEARELLDLAKELGINVIGWCFNLGHACINPKNFYIGIKKGKELTDYAESLGFKFNLIDL 222 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 GGG + L + L I+ EPGR+ A V + + Sbjct: 223 GGGFSGDKDVSIEQYAEQINKGLDEFFPAELGYTIVAEPGRYYSAAAVTAVVPIHGKRFI 282 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYH---------EINYIVNPAGDRLHIHADIVGPICET 347 K + + +Y ++ + P+ + GP C+ Sbjct: 283 RSKDNPNDIEKVFYYFNDGIYGTFYSAKYRGKAVKPIVWKQPSECGPTRKTTLYGPTCDG 342 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI-PEIMVNGSQFHIIRPRMT 406 DF A + +I D + E GAY V + +N P I V S + ++ + Sbjct: 343 IDFFAKDIEIPELNVADFVVFENQGAYSRVHACRFNGFSPPKPVIFVRQSVWALLEEA-S 401 Query: 407 FQELIELDSIPAWL 420 + + P WL Sbjct: 402 EGDATKKRHDPGWL 415 >gi|197101860|ref|NP_001126321.1| antizyme inhibitor 1 [Pongo abelii] gi|75061736|sp|Q5R7K3|AZIN1_PONAB RecName: Full=Antizyme inhibitor 1; Short=AZI; AltName: Full=Ornithine decarboxylase antizyme inhibitor gi|55731083|emb|CAH92257.1| hypothetical protein [Pongo abelii] Length = 448 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 73/378 (19%), Positives = 120/378 (31%), Gaps = 28/378 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQY 263 + A R + G + +D+GGG + P Y Sbjct: 207 VYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGV 266 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMR 313 + F +A I V + K + + + D F Sbjct: 267 KIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFAS 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 D D + + GP C+ D I + + GD L + GA Sbjct: 327 KLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGA 386 Query: 374 YGAVQSGTYNSRLLIPEI 391 + +N Sbjct: 387 DSFHEPSAFNDFQRPAIY 404 >gi|317057515|ref|YP_004105982.1| carboxynorspermidine decarboxylase [Ruminococcus albus 7] gi|315449784|gb|ADU23348.1| carboxynorspermidine decarboxylase [Ruminococcus albus 7] Length = 381 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 108/385 (28%), Gaps = 22/385 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP Y S A++ N + + A KA S A + G E Sbjct: 14 TPCYLVSEKALKHNMEILLSVRKRTGCKILLAQKAFSMYAAYPMMRPYIDGTTASGLYEA 73 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R E VFS K D +L FN S+ +L N + I Sbjct: 74 RLGHE-EFGGETHVFSPAYKKEDMAELVKICDDIIFNSFSQWKLHRGNVKNCGRKVSCGI 132 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + + G+ S + Sbjct: 133 RCNPLY--SEIDTDIYNPCFTGSRLGVTPENFESGELDGI-----------EGLHFHTMC 179 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + + + + + S ++ +++GGG I + Sbjct: 180 EQGADVLARTIPHIEKHFGSYIKQMKWVNLGGGHHITKAGYDVDL----LCRTVDSIQQK 235 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + G LVT+V+ I K+ + ++ A + + + I Sbjct: 236 YGVQVYLEPGEACALNAGWLVTEVLDIGKNGIEFAIVDTSAACHMP--DVLEMPYRPEII 293 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + GP C GD I + GD L Y ++ T+N Sbjct: 294 GAGKEGEKKFCYRLGGPTCLAGDIIGDYAFDEPLKAGDRLVFCDMAIYSMCKNNTFNGMP 353 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQEL 410 L + + R +++ Sbjct: 354 LPEIYLEKLDGSVESV-KRFGYEDF 377 >gi|237714592|ref|ZP_04545073.1| carboxynorspermidine decarboxylase [Bacteroides sp. D1] gi|262406458|ref|ZP_06083007.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_22] gi|294643700|ref|ZP_06721500.1| carboxynorspermidine decarboxylase [Bacteroides ovatus SD CC 2a] gi|294805868|ref|ZP_06764739.1| carboxynorspermidine decarboxylase [Bacteroides xylanisolvens SD CC 1b] gi|298481117|ref|ZP_06999311.1| carboxynorspermidine decarboxylase [Bacteroides sp. D22] gi|229445361|gb|EEO51152.1| carboxynorspermidine decarboxylase [Bacteroides sp. D1] gi|262355161|gb|EEZ04252.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_22] gi|292640938|gb|EFF59156.1| carboxynorspermidine decarboxylase [Bacteroides ovatus SD CC 2a] gi|294446932|gb|EFG15528.1| carboxynorspermidine decarboxylase [Bacteroides xylanisolvens SD CC 1b] gi|298272691|gb|EFI14258.1| carboxynorspermidine decarboxylase [Bacteroides sp. D22] Length = 379 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 122/388 (31%), Gaps = 20/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y + KN N D + A K+ + + S Sbjct: 5 NQFPSPCYIMEEELLRKNLCLIKNVADRAGVEIILAFKSFAMWRSFPIFREYIAHSTASS 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R AL + ++ + S + + V+ G Sbjct: 65 VYEARLALEEFGSKAH---TYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGS 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 RVNP+ + + + +FGI + + + Sbjct: 122 GISCGIRVNPEYSEVETELYNPCAPGTRFGITADLLPDV-----------LPQGIEGFHC 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 S ++ + L L + I+ +++GGG + + L + Sbjct: 171 HCHCESSSYELERTLEHLEAKFSRWFPQIKWLNLGGGHLMTRKDYDTEHLITLLQGLKAR 230 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +IILEPG + G+L ++V+ I +S IL+V+ M L Y Sbjct: 231 HPHL---RIILEPGSAFIWQTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQP 287 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + +I + G C +GD++ L + G+ + E Y V++ + Sbjct: 288 AVRGAEMGNEGKYI-YRLGGNSCLSGDYMGLWSFDHPLQIGERIVFEDMIHYTMVKTNMF 346 Query: 383 NSRLLIPE-IMVNGSQFHIIRPRMTFQE 409 N I + I + ++++ Sbjct: 347 NGIHHPAIAIWTKEGKAE-IYKQFSYED 373 >gi|255306837|ref|ZP_05351008.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile ATCC 43255] Length = 403 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 98/376 (26%), Positives = 156/376 (41%), Gaps = 33/376 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y T I + N G D Y++K N ++K++A G G D S E+ Sbjct: 15 PCYIYDETNIIEKCKELKNNILGFDF--LYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 72 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + V + I +S GKT +I+ L +S +E++ +N+ + +K I Sbjct: 73 ISSECGVSKDDIYYSSPGKTEIDIETVL--DKCIIIADSITEVELINKISKKYNQKVKIG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NPD K KFGI I + S++ S V + G+ +HI SQ+ Sbjct: 131 IRINPDF-----TMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDF 185 Query: 208 ESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 E ++ + +S NI+ I+ G GLG+AY + P + S + Q Sbjct: 186 EKLGHYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIAF 245 Query: 267 LQCKII-----LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +E GRF+V G K++ IK S K ++I+ +N FMRP + + Sbjct: 246 TNSNTLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIE 305 Query: 322 EINYIVNPAGDRL------------------HIHADIVGPICETGDFIALNRKIALPRPG 363 I V G + ++VG +C + D IA N K+ G Sbjct: 306 NITCGVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLKKANIG 365 Query: 364 DLLYIEKTGAYGAVQS 379 DL+ I G+Y S Sbjct: 366 DLISISNAGSYSYSLS 381 >gi|242050040|ref|XP_002462764.1| hypothetical protein SORBIDRAFT_02g031560 [Sorghum bicolor] gi|241926141|gb|EER99285.1| hypothetical protein SORBIDRAFT_02g031560 [Sorghum bicolor] Length = 436 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 67/375 (17%), Positives = 128/375 (34%), Gaps = 24/375 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + A D YA+K N A++ LA LG+G D S E+ Sbjct: 55 FHALDLNKVLDLIAAWRRALP--DVRPYYAVKCNPEPAILGALAALGAGFDCASRAEVEA 112 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT---------------- 132 L V IV++ K ++ A + G+ +SE E+ Sbjct: 113 VLRLGVQPSSIVYANPCKPEPHLEYAAEVGVNLATYDSEEEVGQGQALPPQVGVNLATYD 172 Query: 133 -LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + + K + G K + + A+ G+ Sbjct: 173 SEEEVSKVRRCHPKCELLLRLKGPDGAEAKYNLGTKYGAHADEVVPLLR----AAQRAGI 228 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + GV H+GS + +++ + A + R + + G + GG A + Sbjct: 229 NVVGVSFHVGSGVSRVDVYRGAIEAARAAFDEAVALGMPPMRVLDIGGGFTAGATTFGEA 288 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 ++ +L+H + ++I EPGR+ L +VI + + +D + Sbjct: 289 AAVVNDALLHYFGDLPSVEVIGEPGRYFAETAFTLAARVIGKRTRGEVREYWIDDGLYGS 348 Query: 312 MRPTLYDAYHEINYIVNPAGDRLH-IHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + L D Y + + + GP C++ D + + ++ GD L + Sbjct: 349 LNCILMDQYDPRPRPLGSPRPGEKTHTSTVFGPTCDSQDRMVTDYQLPEVSVGDWLIFDN 408 Query: 371 TGAYGAVQSGTYNSR 385 GAY +N Sbjct: 409 MGAYSTAAGSKFNGF 423 >gi|310641295|ref|YP_003946053.1| carboxynorspermidine decarboxylase [Paenibacillus polymyxa SC2] gi|309246245|gb|ADO55812.1| Carboxynorspermidine decarboxylase [Paenibacillus polymyxa SC2] Length = 379 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 59/396 (14%), Positives = 120/396 (30%), Gaps = 23/396 (5%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 N+ + L +P Y + KN ++ + + ALK S + + Sbjct: 2 NIDITGL----PSPCYLVDERLLVKNLEVLNSVQERTGCSILLALKGFSMFSTFPLVGKY 57 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+ S E R + E V++ + +L FN + + Sbjct: 58 LKGVTSSSLFEARLGRE-KMDKEVHVYAPAYVDSEFDELLEYVDHIVFNSFDQLNRFK-S 115 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + KK I RVNP+ + + G+ + Sbjct: 116 RVQGVTSKKIDIGIRVNPEYSEIETPLYDPCYNNSRMGVTLANFRPEDLDGVD------- 168 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 I ++ + ++ + ++ ++ ++ GGG +H Sbjct: 169 ----GIHFHTMCEQNSDTLERTIKVVDEKFGPYIKQMKWLNFGGG----HHITREDYDLD 220 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 I + ++ LEPG + + G LV V+ K+ + + + P Sbjct: 221 TLVRCIQYFQDKYGVQVYLEPGEAIALNTGYLVATVLDTMKNG--MDIAILDTSAECHMP 278 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + N I + G C GD I +PGD L Y Sbjct: 279 DVLAMPYRPNIIGAGKPGEYAHTYRLGGLTCLAGDVIGDYSFKEPLKPGDKLVFCDMAHY 338 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 V++ +N L N + + + ++++ Sbjct: 339 TMVKNHMFNGVNLPAIASYNDEEGIKVIRQFSYEDF 374 >gi|291522187|emb|CBK80480.1| Diaminopimelate decarboxylase [Coprococcus catus GD/7] Length = 395 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 72/388 (18%), Positives = 147/388 (37%), Gaps = 21/388 (5%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA QTP + + ++K + +CYA+KAN+ +IK L + Sbjct: 9 ALAQTYQTPMHIFDMAILKKRVAFLKSHLPE-KVSLCYAVKANT--FIIKELCGQVERFE 65 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 + S GEL +P ++V SGV KT ++ + G+ +ES + L ++ Sbjct: 66 VCSPGELAICRRLQIPMRQVVLSGVYKTPAVMEALFRDGVDIGIFTAESMEQYLLLAGLA 125 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 I + ++FG+ + + + + V++ G+ Sbjct: 126 ERYTMKIRLLLRL-------------TSGNQFGMDENVLIQTIRMSRSNEWVEVEGIQFF 172 Query: 200 IGSQIDQIES-FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 G+Q ++ + + + + G ++ ++ G GL + Y S A Sbjct: 173 SGTQKTSVKKLRRELTYVDAFIQRLETEEGFRVKELEFGPGLPVFYFQGDDFDEVSFLAE 232 Query: 259 LIHQYFGNL-QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP-TL 316 Q K+ E GR + A G +T V+ K + + + I+D ++ + Sbjct: 233 FSEMLSEMTSQVKLTFELGRSIAASCGNYMTSVVDAKVNKKQNYAIVDGGIHQLVYYGQS 292 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 H +++ + + ++ G +C D + + GD++ E TGAY Sbjct: 293 MAMKHPYCHVLPEKQEGETMDWNLFGSLCTVNDILVKQMPVRNLTVGDVIVFENTGAYST 352 Query: 377 VQSGT-YNSRLLIPEIMV-NGSQFHIIR 402 + + SR L ++ + H++R Sbjct: 353 TEGIALFLSRDLPKILLRKEDGEIHVLR 380 >gi|9055298|ref|NP_061215.1| antizyme inhibitor 1 [Mus musculus] gi|156255200|ref|NP_001095928.1| antizyme inhibitor 1 [Mus musculus] gi|13431735|sp|O35484|AZIN1_MOUSE RecName: Full=Antizyme inhibitor 1; Short=AZI; AltName: Full=Ornithine decarboxylase antizyme inhibitor gi|183448303|pdb|3BTN|A Chain A, Crystal Structure Of Antizyme Inhibitor, An Ornithine Decarboxylase Homologous Protein gi|183448304|pdb|3BTN|B Chain B, Crystal Structure Of Antizyme Inhibitor, An Ornithine Decarboxylase Homologous Protein gi|2645701|gb|AAB87464.1| antizyme inhibitor [Mus musculus] gi|26340414|dbj|BAC33870.1| unnamed protein product [Mus musculus] gi|26353728|dbj|BAC40494.1| unnamed protein product [Mus musculus] gi|27882604|gb|AAH43722.1| Antizyme inhibitor 1 [Mus musculus] gi|148676850|gb|EDL08797.1| antizyme inhibitor 1 [Mus musculus] Length = 448 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 75/380 (19%), Positives = 123/380 (32%), Gaps = 30/380 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQTVVAQIKP--FYTVKCNSTPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I+F+ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEDGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKEYQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +D+GGG L + Sbjct: 207 VYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVIS-PLLDIYFPEGSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT----------------FVILDVAMNDFM 312 +II EPG + V+ L +I+ K + + + D F Sbjct: 266 IQIISEPGSYYVSSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFA 325 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 D D + + GP C+ D I + + GD L + G Sbjct: 326 SKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMG 385 Query: 373 AYGAVQSGTYNSRLLIPEIM 392 A + +N Sbjct: 386 ADSFHEPSAFNDFQRPAIYF 405 >gi|167648396|ref|YP_001686059.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter sp. K31] gi|167350826|gb|ABZ73561.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter sp. K31] Length = 390 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 74/398 (18%), Positives = 132/398 (33%), Gaps = 29/398 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + V +P + A+ +N T + D + ALKA S ++ + G+ Sbjct: 17 NRVPSPCFVVDEAAVRRNLATLKDVGDRGGATMLLALKAFSMWSLADVVGEYLDGVCASG 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT-LNQRAVSLG 141 E R A +S + D D+ S FN + L A G Sbjct: 77 LWEARLARE-HYRGHLTTYSPAYRREDLPDILRLSDAVIFNSPDQMARFRDLIATARDQG 135 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + I R+NP+ + K + + G P+ ++ + + Sbjct: 136 QVFEIGLRLNPEHSEAEVAKYDPCQAGSRLGFPVSRLRLEHLEGVD-----------GLH 184 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + F ++ L +L ++ +++GGG I + + Sbjct: 185 VHALCEQGFEPLRRIWASLEPKLEGMLGRLKWLNLGGGHHITRAD----YDKEGLVAFLR 240 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 Q +++LEPG + D GILV +++ + + VA+ D Sbjct: 241 QISARHGLQVVLEPGEAIALDAGILVGEILDTFDN------AMTVAITDISATCHMPDVI 294 Query: 322 EINYIVNPAGDRLH-IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 E Y +R + I GP C GD I A P PG + Y V++ Sbjct: 295 EAPYRPALLNERPQGVTVRIGGPSCLAGDIIGDYVFAATPTPGMRIAFLDQAHYSMVKTN 354 Query: 381 TYNSRLLIPEIMVN--GSQFHIIRPRMTFQELIELDSI 416 T+N L + N +IR + + D + Sbjct: 355 TFNGVPLPSIALWNSESDVLKLIRQ-FDYTDF--RDRL 389 >gi|22507525|gb|AAH19412.1| Antizyme inhibitor 1 [Mus musculus] Length = 448 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 75/380 (19%), Positives = 123/380 (32%), Gaps = 30/380 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQTVVAQIKP--FYTVKCNSTPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I+F+ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEDGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKEYQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +D+GGG L + Sbjct: 207 VYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVIS-PLLDIYFPEGSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT----------------FVILDVAMNDFM 312 +II EPG + V+ L +I+ K + + + D F Sbjct: 266 IQIISEPGSYYVSSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFA 325 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 D D + + GP C+ D I + + GD L + G Sbjct: 326 SKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMG 385 Query: 373 AYGAVQSGTYNSRLLIPEIM 392 A + +N Sbjct: 386 ADSFHEPSAFNDFQRPAIYF 405 >gi|32526681|dbj|BAC79204.1| putative ornithine decarboxylase [Oryza sativa Japonica Group] Length = 414 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 70/363 (19%), Positives = 129/363 (35%), Gaps = 19/363 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + A D CYA+K N + A++ LA LG+G D S E+ Sbjct: 52 FHVFDLAKVVDLHRGWRRALP--DVRPCYAVKCNPDGAMLAALAALGAGFDCASRAEIEA 109 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V IV++ K ++ A + G+ +SE E+ + + Sbjct: 110 VLALGVRPATIVYANPCKPEAHLEYAAEVGVNLTTYDSEEEVAKVRRCHPRCE-----LL 164 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 ++ K K + + A+ GV ++GV H+GS + + Sbjct: 165 LRIKAPDSGDAKVDLGLKYGANPDEVLPLLR-----AAQREGVAVAGVSFHVGSGASRAD 219 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A + R+ + G + GG +A + + + A + Sbjct: 220 VYRGAIEAAREAFDAAAALGMPPMRVLDIGGGFMAGRTFDEAAAVINRAL-ERHFGDLPC 278 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 ++I EPGR+ L +VI + + +D + + L D Y + Sbjct: 279 VEVIGEPGRYFAETAFTLAARVIGKRTRGELREYWIDDGLYGSLNCILMDHYVPRPRPLA 338 Query: 329 PAGDRLHIHAD------IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 A A + GP C++ D + ++ GD L + GAY + Sbjct: 339 AAAAGEDTTAATTHASTVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTAAGSNF 398 Query: 383 NSR 385 N Sbjct: 399 NGF 401 >gi|307213747|gb|EFN89085.1| Ornithine decarboxylase [Harpegnathos saltator] Length = 400 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 73/381 (19%), Positives = 136/381 (35%), Gaps = 19/381 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + + + +A+K+NS+ VIK LA L + D S+ E+++ Sbjct: 30 FYIADIGKVIAKHDEWIAKMPR--VVPHFAIKSNSDPTVIKVLAALDACFDCASKQEIKQ 87 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V +RI+F+ K I A + + V+SE EL + I Sbjct: 88 VMQHGVHGDRIIFAHPAKYPSHIIYAKKVDVKQMTVDSEYELFKIKDFFPEAKIVIRIRC 147 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 K + KFG H+ + G+ + G H+GS + E Sbjct: 148 D----------SKNTPVVLGMKFGCESHEEAVRLIQLTKDLGLNLHGFSFHVGSPCCEPE 197 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ + + + L +S G + + GG + +S + Sbjct: 198 AYSRGITMCKQLIIVSKSIGCDDVQLIDIGGGFPGESGTNIDEIASVVN--KAIQDVDPS 255 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKS----ADKTFVILDVAMNDFMRPTLYDAYHEIN 324 ++I EPG + VA L + + S + ++ + + L D + Sbjct: 256 IRVISEPGTYYVASSFTLASYLHSKRMILKDGETMRMYYINCGVFNGFTEELLDLQARVP 315 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 +++ + + G + D I + + GD L + GAY S T+N Sbjct: 316 QLLSEPVSSEKFSSCVWGSTLHSYDLIVKDMLLPELNIGDWLIWKDMGAYAISLSTTFNG 375 Query: 385 RLLIPEI-MVNGSQFHIIRPR 404 + I +V SQ+ R R Sbjct: 376 FEIPVVIPIVRKSQWEDFRAR 396 >gi|30583931|gb|AAP36214.1| Homo sapiens ornithine decarboxylase antizyme inhibitor [synthetic construct] gi|60653891|gb|AAX29638.1| ornithine decarboxylase antizyme inhibitor [synthetic construct] Length = 449 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 73/378 (19%), Positives = 120/378 (31%), Gaps = 28/378 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQY 263 + A R + G + +D+GGG + P Y Sbjct: 207 VYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGV 266 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMR 313 + F +A I V + K + + + D F Sbjct: 267 KIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFAS 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 D D + + GP C+ D I + + GD L + GA Sbjct: 327 KLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGA 386 Query: 374 YGAVQSGTYNSRLLIPEI 391 + +N Sbjct: 387 DSFHEPSAFNDFQRPAIY 404 >gi|327439420|dbj|BAK15785.1| diaminopimelate decarboxylase [Solibacillus silvestris StLB046] Length = 397 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 63/387 (16%), Positives = 116/387 (29%), Gaps = 22/387 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 +P + +E+N + D + + ALK S + + +G+ S Sbjct: 26 KAPSPAFVVDERLLERNLKLLKSVQDRTNCDILLALKGFSMWSTFPMARNYLAGITSSSL 85 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R + V + + + + S +L + ++ K Sbjct: 86 FEARLGFEEFG---KEVHAYAPAYAEHEIDEYLTYVDHIVFNSFDQLNKYKDKVLNHEKN 142 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 I RVNP + + GIP+ I Sbjct: 143 ISIGLRVNPGYSEVETPLYDPCYINSRLGIPVESFRPDELDGV-----------EGIHFH 191 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + ++L ++ H ++ I+ GGG I SLI++ Sbjct: 192 AMCEQGAEVLERILVHFEEKYGEYLHQMKWINFGGGHHITKPGYDVEL----LVSLINRI 247 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 K+ILEPG + + G LV V+ I ++ + ++ A I Sbjct: 248 QETYGVKVILEPGEAIALNTGYLVATVLDIVQNGMELAIVDSSATCHMPDTLEMPYRAHI 307 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + + G C GD I + GD L Y V++ +N Sbjct: 308 I--GSGQPNEKAYTYRLGGMTCLAGDIIGDYSFDEPLQAGDKLVFTDMAHYTMVKTHMFN 365 Query: 384 SRLLIPEIMVNG-SQFHIIRPRMTFQE 409 L N +IR +++ Sbjct: 366 GVNLPSICTYNEQDGVKVIRTFQ-YED 391 >gi|119485296|ref|XP_001262180.1| ornithine decarboxylase, putative [Neosartorya fischeri NRRL 181] gi|119410336|gb|EAW20283.1| ornithine decarboxylase, putative [Neosartorya fischeri NRRL 181] Length = 413 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 74/370 (20%), Positives = 135/370 (36%), Gaps = 39/370 (10%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 +A PF+ + + + + D YA+K N + ++K LA+LG+G D Sbjct: 27 IADE---PFFVADLGQVIRQHRRWRVNLP--DVHPFYAVKCNPDPNLLKLLANLGTGFDC 81 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S ELR L+ V RI+F+ K+ + A ++G+ ++ EL T+ L Sbjct: 82 ASIEELRTVLSLGVDPCRIIFANPCKSASSLVFAARTGVTRTTFDNLDELDTI---RTFL 138 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + D +A +KFG + L A L + + GV H+ Sbjct: 139 PNAELVLRIYASDSDA-------LIDLGEKFGATVEASLPLLQRARELG-LDVCGVSFHV 190 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 G+ ++ A + + + +S G ++ +D+GGG D Sbjct: 191 GTGASNASAYVNAIRHAKIVFGYGKSLGFDMNLLDIGGGFQDCNLEDIACTLRPML---- 246 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM-------- 312 + +++ EPGR+ V L K++S ++ + Sbjct: 247 -KEEFPSGVRLLAEPGRYYVRSAYTLACKILSRRRHIGTDDHDRPDMLYQNDGVYGNFMN 305 Query: 313 --------RPTLYDAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIALNRKI-ALPRP 362 RP+L + N + I GP C++ D +A + + + R Sbjct: 306 VLIEKETVRPSLVAYTWPFHSHGNDTRRKLEEHRYTIWGPTCDSMDCVAKDVPMTSEIRI 365 Query: 363 GDLLYIEKTG 372 GD L + G Sbjct: 366 GDWLKYKNMG 375 >gi|221122172|ref|XP_002161495.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 468 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 82/388 (21%), Positives = 135/388 (34%), Gaps = 37/388 (9%) Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +K+N N VI LA LG D S+ E+ L V +RI+F+ K + A Sbjct: 1 VKSNPNPVVIALLARLGVNFDCASKCEIETVLDLGVNPDRIIFANPCKQESHVKYANTKN 60 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + +SE EL + + I ST K KFG + Sbjct: 61 VRKMTFDSEGELYKVKENFPGAELVLRIKVD----------DSKSTFKLGRKFGASLETT 110 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 L A L + GV H+G+ F+ A K D+ QQ G +D+GG Sbjct: 111 QKLLQLAKDLDL-NVIGVSFHVGTGCYDAALFYNAVKSAADVFQQGDIIGFTFTLLDIGG 169 Query: 239 GLGIAYHSD--HRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 G + SL + II EPG++ V L VIS+K+ Sbjct: 170 GFPGFKDETISMENIADKLNLSLAEFFPSKRNLSIIAEPGKYFVESAFTLCCNVISVKEV 229 Query: 297 ADKT----FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 ++ F+ + I +++ + L + + GP C++ D I+ Sbjct: 230 SNNNKNEQFMYYLNDGVYTSFKDVLFGKKFIPFLLQESSTSLLFKSSLWGPTCDSTDCIS 289 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI---------PEIMVNGSQFHIIRP 403 + D LY + GAY + +N E +VN + Sbjct: 290 EEIYLPKLSVQDWLYFKNMGAYSTCFASKFNGFNPPVIYYMNPELAENIVNNT------R 343 Query: 404 RMTFQELIE---LDSIPAWLQKTPKQSS 428 R + +L + +P + ++ + Sbjct: 344 R--YSQLFSDVVFEMLPDYKEREVENKD 369 >gi|297609894|ref|NP_001063827.2| Os09g0543400 [Oryza sativa Japonica Group] gi|255679105|dbj|BAF25741.2| Os09g0543400 [Oryza sativa Japonica Group] Length = 408 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 70/363 (19%), Positives = 129/363 (35%), Gaps = 19/363 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + A D CYA+K N + A++ LA LG+G D S E+ Sbjct: 46 FHVFDLAKVVDLHRGWRRALP--DVRPCYAVKCNPDGAMLAALAALGAGFDCASRAEIEA 103 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V IV++ K ++ A + G+ +SE E+ + + Sbjct: 104 VLALGVRPATIVYANPCKPEAHLEYAAEVGVNLTTYDSEEEVAKVRRCHPRCE-----LL 158 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 ++ K K + + A+ GV ++GV H+GS + + Sbjct: 159 LRIKAPDSGDAKVDLGLKYGANPDEVLPLLR-----AAQREGVAVAGVSFHVGSGASRAD 213 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A + R+ + G + GG +A + + + A + Sbjct: 214 VYRGAIEAAREAFDAAAALGMPPMRVLDIGGGFMAGRTFDEAAAVINRAL-ERHFGDLPC 272 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 ++I EPGR+ L +VI + + +D + + L D Y + Sbjct: 273 VEVIGEPGRYFAETAFTLAARVIGKRTRGELREYWIDDGLYGSLNCILMDHYVPRPRPLA 332 Query: 329 PAGDRLHIHAD------IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 A A + GP C++ D + ++ GD L + GAY + Sbjct: 333 AAAAGEDTTAATTHASTVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTAAGSNF 392 Query: 383 NSR 385 N Sbjct: 393 NGF 395 >gi|56695512|ref|YP_165860.1| carboxynorspermidine decarboxylase [Ruegeria pomeroyi DSS-3] gi|56677249|gb|AAV93915.1| carboxynorspermidine decarboxylase [Ruegeria pomeroyi DSS-3] Length = 392 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 65/388 (16%), Positives = 113/388 (29%), Gaps = 26/388 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V TP + AIE+N + D V ALKA S + + G Sbjct: 25 RVPTPCFVVDEVAIERNLKILRDISDRSGAHVLSALKAFSMFTLAPLVRQYLGGTCASGI 84 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R E F K D ++ S FN ++ + + + Sbjct: 85 YEARLGRE-EYGGEVATFCAGYKEQDIDEILSLSNHIIFNSPAQKDRFL----SRAQAAG 139 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + R+NP+ + K + G P+ + + Sbjct: 140 VQVGLRINPEHSEGEIAKYDPCAPCSRLGTPVSLLTPETLKGVD-----------GLHMH 188 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + F + + +L ++ ++ GGG I + Sbjct: 189 TLCEQGFEPLLRTWAAVEPKLAPYLPGLKWLNFGGGHHITRAD----YDRDALIDFLKSL 244 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + LEPG + D GILV +++ + S I D++ M + Y Sbjct: 245 RARHGLDVYLEPGEAVALDAGILVGEILDLP-SNGMDLAITDISATCHMPDVIEAPYRPA 303 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 +G + GP C GD I G Y V++ T+N Sbjct: 304 LMDEADSG----HTYRLGGPSCLAGDVIGDYTWDQPLTIGQRFAFLDQAHYSMVKTNTFN 359 Query: 384 SRLLIPEIMVNGSQFHI-IRPRMTFQEL 410 L + N + I + + + Sbjct: 360 GVPLPTIALWNSKTDALRIVRQFDYSDF 387 >gi|21361583|ref|NP_056962.2| antizyme inhibitor 1 [Homo sapiens] gi|22538418|ref|NP_680479.1| antizyme inhibitor 1 [Homo sapiens] gi|114621174|ref|XP_001154633.1| PREDICTED: ornithine decarboxylase antizyme inhibitor isoform 2 [Pan troglodytes] gi|114621176|ref|XP_001154692.1| PREDICTED: ornithine decarboxylase antizyme inhibitor isoform 3 [Pan troglodytes] gi|114621178|ref|XP_001154750.1| PREDICTED: antizyme inhibitor 1 isoform 4 [Pan troglodytes] gi|114621180|ref|XP_519894.2| PREDICTED: antizyme inhibitor 1 isoform 5 [Pan troglodytes] gi|33860187|sp|O14977|AZIN1_HUMAN RecName: Full=Antizyme inhibitor 1; Short=AZI; AltName: Full=Ornithine decarboxylase antizyme inhibitor gi|16807144|gb|AAH13420.1| Antizyme inhibitor 1 [Homo sapiens] gi|19483826|gb|AAH19279.1| Antizyme inhibitor 1 [Homo sapiens] gi|30582555|gb|AAP35504.1| ornithine decarboxylase antizyme inhibitor [Homo sapiens] gi|48145607|emb|CAG33026.1| OAZIN [Homo sapiens] gi|61362209|gb|AAX42178.1| ornithine decarboxylase antizyme inhibitor [synthetic construct] gi|61362216|gb|AAX42179.1| ornithine decarboxylase antizyme inhibitor [synthetic construct] gi|119612257|gb|EAW91851.1| antizyme inhibitor 1, isoform CRA_a [Homo sapiens] gi|119612259|gb|EAW91853.1| antizyme inhibitor 1, isoform CRA_a [Homo sapiens] gi|123979642|gb|ABM81650.1| antizyme inhibitor 1 [synthetic construct] gi|123982780|gb|ABM83131.1| antizyme inhibitor 1 [synthetic construct] gi|123982782|gb|ABM83132.1| antizyme inhibitor 1 [synthetic construct] gi|123997449|gb|ABM86326.1| antizyme inhibitor 1 [synthetic construct] Length = 448 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 73/378 (19%), Positives = 120/378 (31%), Gaps = 28/378 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQY 263 + A R + G + +D+GGG + P Y Sbjct: 207 VYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGV 266 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMR 313 + F +A I V + K + + + D F Sbjct: 267 KIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFAS 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 D D + + GP C+ D I + + GD L + GA Sbjct: 327 KLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGA 386 Query: 374 YGAVQSGTYNSRLLIPEI 391 + +N Sbjct: 387 DSFHEPSAFNDFQRPAIY 404 >gi|2641952|dbj|BAA23593.1| antizyme inhibitor [Homo sapiens] Length = 448 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 73/378 (19%), Positives = 120/378 (31%), Gaps = 28/378 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQY 263 + A R + G + +D+GGG + P Y Sbjct: 207 VYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGV 266 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMR 313 + F +A I V + K + + + D F Sbjct: 267 KIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFAS 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 D D + + GP C+ D I + + GD L + GA Sbjct: 327 KLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGA 386 Query: 374 YGAVQSGTYNSRLLIPEI 391 + +N Sbjct: 387 DSFHEPSAFNDFQRPAIY 404 >gi|73949907|ref|XP_535320.2| PREDICTED: similar to ornithine decarboxylase-like protein isoform 1 [Canis familiaris] Length = 460 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 70/371 (18%), Positives = 127/371 (34%), Gaps = 30/371 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ A+ + + Y +K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAVVRKHFCLLKCLPR--VRPFYTVKCNSSPGVLKVLAELGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPA +IV++ K I +I A + G+ + ++E EL + + S IA Sbjct: 99 VQRIGVPASKIVYANPCKQIAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG + L A V++ GV H+GS + Sbjct: 158 ---------TDDSHSLSHLSFKFGASLKSCRHLLENAKRS-HVEVVGVSFHVGSGCPDLH 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 208 AYTQSIADARLVFEMGAELGHRMHILDLGGGFPGLEGAKVRFEEIATVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 I+ GR+ V L +I+ K + + + F Sbjct: 268 CGVDILARLGRYYVTSAFTLAVSIIAKKEVLLDQPGREEETGSTPKTIVYHLGEGVYGIF 327 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + + ++ + + GP+ + D +A + GD L E Sbjct: 328 NSVLFDNTCPTPILQKKSSTEQPLYSSSLWGPVADGSDCVAEGLWLPQLHVGDWLVFENM 387 Query: 372 GAYGAVQSGTY 382 GAY + Sbjct: 388 GAYTVGMGSLF 398 >gi|196013976|ref|XP_002116848.1| hypothetical protein TRIADDRAFT_31500 [Trichoplax adhaerens] gi|190580566|gb|EDV20648.1| hypothetical protein TRIADDRAFT_31500 [Trichoplax adhaerens] Length = 390 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 74/366 (20%), Positives = 133/366 (36%), Gaps = 21/366 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + Y+T+++ G+ +ALK + + +I TL LG+GLD+ S GE+ Sbjct: 15 PFYLVDIGDVIYKYVTWTSMMPGI--RPYFALKCHPDFQIIATLCSLGAGLDVASAGEIE 72 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A A + E +V+S K I I A + G+ + +SE EL+ + + + Sbjct: 73 IARALGLQDEDVVYSNTCKGISHIRAAAKEGLTQMSFDSEVELQRIKLTFPNAKLLIRLL 132 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + K S + G+ + G HIGS Sbjct: 133 V-----------DDSHSILKTGAKAGTPFSRVSHLFKVAKELGLNVVGTSFHIGSGCHDP 181 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +F KA + + + G ++ +D+GGG ++ + ++ + + Sbjct: 182 SAFTKAIEKSKKAFDIAKEQGLELKVLDIGGGFPGHANTLFENMCHAVNQAIDIHFPADS 241 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT--------LYDA 319 KII EPGRF LV +I + V ++ + A Sbjct: 242 GVKIIAEPGRFFAHTSSTLVANIIGKRLRYSDDDVQIEGTEMLYHINDGLIGSFLGTILA 301 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + + + GP C D + + + G+ +Y E GAY + + Sbjct: 302 RQKYLPQQLIPTKGKSYRSSLWGPSCGAMDCLLSDCNLPEMEAGEWVYYEDMGAYTSCLT 361 Query: 380 GTYNSR 385 +N Sbjct: 362 TNFNGF 367 >gi|198430947|ref|XP_002123875.1| PREDICTED: similar to putative ornithine decarboxylase [Ciona intestinalis] Length = 437 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 76/363 (20%), Positives = 140/363 (38%), Gaps = 16/363 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + FY + +N ++ + YA+K N +Q V++ LA LG G D S Sbjct: 43 KEWDSSFYLADLGQVVRNLQLWTKHMPKI--RPYYAMKCNPSQPVVQLLASLGVGFDCAS 100 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 + E+ AL V E I+F+ K I+ A Q+G+ V++ EL + + + Sbjct: 101 KFEIETALKCGVKPEDILFAVPCKMSSHIEYACQTGVQVMTVDNADELHKIKRIHPTGKL 160 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + K DKFG+ + + L L + + GV H GS Sbjct: 161 LLRLNVKYCGN----------GIKMGDKFGVTMSEARELILLCKELE-LDLIGVCFHPGS 209 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + E+ + + R+L + G++ + +D+GGG + S A++ Sbjct: 210 GSNSFETIRDSLQRCRELYDFAKLIGNDFKIVDIGGGF--VCGDNFIKISKQVNATIDRL 267 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I EPGRF V + VT V D + + ++ + Sbjct: 268 FPPETGLTVIAEPGRFFVENAFAFVTSVHGKAIRGDSAKYYIGSGVFAAFCLKYFEKFIR 327 Query: 323 INYIVNPAGDRLHIHA-DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 I ++ D+ +A + GP D + + + + D + GAY + S Sbjct: 328 IPESLSRQADKCKCYASTVYGPTGAGDDIVLCDSMLPEAQIDDWWLFDNMGAYSPLLSLG 387 Query: 382 YNS 384 +N Sbjct: 388 FNG 390 >gi|317489942|ref|ZP_07948434.1| pyridoxal-dependent decarboxylase [Eggerthella sp. 1_3_56FAA] gi|316910940|gb|EFV32557.1| pyridoxal-dependent decarboxylase [Eggerthella sp. 1_3_56FAA] Length = 412 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 82/405 (20%), Positives = 153/405 (37%), Gaps = 25/405 (6%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 + ++ +L+ TP Y + + + +CYA+KAN +++ Sbjct: 1 MMIDDATLQNALDACPTPLYLFDQQVLNDRITRLRASLP-SRIKLCYAMKANP--FIVRE 57 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + L ++ S GE+ A VP E+IV SGV K +D Q+ ES Sbjct: 58 ASALADCVEACSPGEVLICANAGVPFEKIVLSGVWKDRRCLDDLFQADRIPHRFTIESSQ 117 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + ++ + + ++FG+ + L A P Sbjct: 118 QLKDLVELANAYRRRVNVLFRLSSE-------------NQFGVDSATLKELIAGCKDDPF 164 Query: 191 VKISGVDMHIGSQIDQIES-FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + I G+ + G+Q ++ + KL R + + + + I+ G GL + Y ++ Sbjct: 165 ISIQGIQYYSGTQKTSLKKLDRELSKLHRIVAEVEAACSVKLNEIEYGPGLPVEYFDENE 224 Query: 250 PPSSSDYASLIHQY-----FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + S + + + I+LE GR + AD G +T V+ +K ++ + + I+ Sbjct: 225 ERARSAQDEPVAELATLLDGFPFEGDIVLELGRSIAADCGAYLTSVVDVKTTSGQNYAIV 284 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D M+ A + A +I G +C D +A I GD Sbjct: 285 DGGMHQISYYGHSMAMKSPVFRKVGATAGAAQPWNICGALCTVNDILAKQAPIVDLSVGD 344 Query: 365 LLYIEKTGAYGAVQS-GTYNSRLLIPEIMVN-GSQFHIIRPR-MT 406 +L + GAY A + + SR L ++ + I R R T Sbjct: 345 VLAFSRAGAYCATEGRALFLSRDLPSVVVRDVSGNMRIARHRLET 389 >gi|29346084|ref|NP_809587.1| carboxynorspermidine decarboxylase [Bacteroides thetaiotaomicron VPI-5482] gi|29337978|gb|AAO75781.1| carboxynorspermidine decarboxylase [Bacteroides thetaiotaomicron VPI-5482] Length = 379 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 59/386 (15%), Positives = 117/386 (30%), Gaps = 18/386 (4%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 +P Y + KN + D + A K+ + S Sbjct: 6 QFPSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSV 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R AL + ++ + S ++ + V+ G Sbjct: 66 YEARLALEEFGSKAH---TYSPAYTEQDFPEIMRCSSHITFNSMAQFRRFYPMTVAEGSG 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 RVNP+ + + + +FG+ + + Sbjct: 123 ISCGIRVNPEYSEVETELYNPCAPGTRFGMTADLLPDT-----------LPKGIEGFHCH 171 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S + + L+ L ++ I+ +++GGG + L +Y Sbjct: 172 CHCESSSFELERTLQHLEEKYSRWFPQIKWLNLGGGHLMTRKDYDTEHLIKLLQDLKARY 231 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +IILEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 232 PHL---QIILEPGSAFTWQTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPA 288 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + I + G C +GD++ L + G+ + E Y V++ +N Sbjct: 289 VRGAEMGNEGEFI-YRLGGNSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFN 347 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 + I + ++++ Sbjct: 348 GIHHPAIALWTKEGKAEIYKQFSYED 373 >gi|298385451|ref|ZP_06995009.1| carboxynorspermidine decarboxylase [Bacteroides sp. 1_1_14] gi|298261592|gb|EFI04458.1| carboxynorspermidine decarboxylase [Bacteroides sp. 1_1_14] Length = 379 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 59/386 (15%), Positives = 117/386 (30%), Gaps = 18/386 (4%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 +P Y + KN + D + A K+ + S Sbjct: 6 QFPSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSV 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R AL + ++ + S ++ + V+ G Sbjct: 66 YEARLALEEFGSKAH---TYSPAYTEQDFPEIMRCSSHITFNSMAQFRRFYPMTVAEGSG 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 RVNP+ + + + +FG+ + + Sbjct: 123 ISCGIRVNPEYSEVETELYNPCAPGTRFGMTADLLPDT-----------LPKGIEGFHCH 171 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S + + L+ L ++ I+ +++GGG + L +Y Sbjct: 172 CHCESSSFELERTLQHLEEKFSRWFPQIKWLNLGGGHLMTRKDYDTEHLIKLLQDLKARY 231 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +IILEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 232 PHL---QIILEPGSAFTWQTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPA 288 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + I + G C +GD++ L + G+ + E Y V++ +N Sbjct: 289 VRGAEMGNEGEFI-YRLGGNSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFN 347 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 + I + ++++ Sbjct: 348 GIHHPAIALWTKEGKAEIYKQFSYED 373 >gi|253741439|gb|EES98309.1| Ornithine decarboxylase [Giardia intestinalis ATCC 50581] Length = 448 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 78/412 (18%), Positives = 143/412 (34%), Gaps = 60/412 (14%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 + + IE+ Y + V YA+K N + +++++ LG+G D S E+R AL Sbjct: 41 VLNVSEIERYYKLWKTHLPE--VQVRYAIKCNMHPLLLRSMYLLGAGFDCASPAEVRAAL 98 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A P +I+++ K I A + F +SE EL ++ + + + Sbjct: 99 ATGCPPSKIIYANPQKPKQSIVEAFRLNCNTFTFDSEHELLSMLENTPPGKAGRFVLRLL 158 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 PD +++ + KFG + + L L + G H+GS +SF Sbjct: 159 PPDESSS------ICRFGVKFGASPSECYRLIRLCKHLGA-NLVGFSFHVGSGCGSADSF 211 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF------ 264 A + + + + R G + +++GGG H + + Sbjct: 212 RLAVRYMGEAAKFAREQGFTLTVMNIGGGYMSRGAERHYDEPNQHANISPPSFEEVASAL 271 Query: 265 -------------GNLQCKIILEPGRFLVADVGILVTKVISIKKSADK------------ 299 + +I+ EPGRF D+ L T++ + DK Sbjct: 272 REEIDKIKVYFTSKSEDLEIMAEPGRFFAGDIMTLGTRIYGRRIIFDKIEDDNYLTEKEI 331 Query: 300 ----------TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI----------HAD 339 + + + L+D + GD + Sbjct: 332 IESGKASINEVKYYVGDGVYGYYNAILFDHVVPHLRFTDKYGDSKEHSGTCMGSSLNTSS 391 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 I GP C++ D I RK+ L GD + + GAY + +N + + Sbjct: 392 IFGPTCDSLDCILKERKLPLLEVGDWVITDAFGAYTYAAATEFNGIPHVSVV 443 >gi|158254464|dbj|BAF83205.1| unnamed protein product [Homo sapiens] Length = 448 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 73/378 (19%), Positives = 120/378 (31%), Gaps = 28/378 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQY 263 + A R + G + +D+GGG + P Y Sbjct: 207 VYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLGIYFPEGSGV 266 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMR 313 + F +A I V + K + + + D F Sbjct: 267 KIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFAS 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 D D + + GP C+ D I + + GD L + GA Sbjct: 327 KLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGA 386 Query: 374 YGAVQSGTYNSRLLIPEI 391 + +N Sbjct: 387 DSFHEPSAFNDFQRPAIY 404 >gi|29830040|ref|NP_824674.1| lysine/ornithine decarboxylase [Streptomyces avermitilis MA-4680] gi|29607150|dbj|BAC71209.1| putative diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680] Length = 485 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 91/387 (23%), Positives = 147/387 (37%), Gaps = 24/387 (6%) Query: 47 AFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGK 106 G + +A+KA V++ L G G ++ S GEL A AA V ER V K Sbjct: 87 VAPGTPVLHAFAVKATPLVPVLRLLGEAGIGAEVASPGELALAQAAGVAPERTVLDSPAK 146 Query: 107 TIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK 166 T E+ AL GI N ++ EL ++ S +P+ RVNP + + +ST Sbjct: 147 TPAELREALALGIA-VNADNPQELDRIDALVRSAPSGSPVGIRVNPQVGGGSIDALSTAT 205 Query: 167 KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 KFG+ + + + +H S + A + Sbjct: 206 ATSKFGVALR-DEGAREWILRAYADRPWLTRLHAHSGSQGMPLSLMARGIAETYALAEEI 264 Query: 227 NGH----NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF---GNLQCKIILEPGRFL 279 N H I ID+GGGL + + SD P+ + YA L+ + + + ++ E GR L Sbjct: 265 NRHVGRRQIDTIDIGGGLPVNFGSDATTPTYARYARLLAESVPGLFDGRYGLVTEFGRSL 324 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN----PAGDRLH 335 +A G +V +V K + + + + R A + Sbjct: 325 LAKHGTVVARVEYAKSAGGRAVAVTHAGVQVATRTVYAPASWPLRITAYDAKGHPKAGPE 384 Query: 336 IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI---- 391 + D+ GP C GD +A+ R + L GD + TGAY YNS Sbjct: 385 VVQDVAGPACFAGDLLAVGRALPLLEQGDHVAALDTGAYYFAHHYAYNSLARPGIYGFAT 444 Query: 392 -------MVNGSQFHIIRPRMTFQELI 411 +G +F ++R +E++ Sbjct: 445 GGVGGGAGGSGVRFAVVREPQAVEEIV 471 >gi|308068410|ref|YP_003870015.1| carboxynorspermidine decarboxylase [Paenibacillus polymyxa E681] gi|305857689|gb|ADM69477.1| carboxynorspermidine decarboxylase [Paenibacillus polymyxa E681] Length = 379 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 58/396 (14%), Positives = 120/396 (30%), Gaps = 23/396 (5%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 N+ + L +P Y + KN ++ + + ALK S + + Sbjct: 2 NIDITGL----PSPCYLVDERLLVKNLEVLNSVQERTGCSILLALKGFSMFSTFPLVGKY 57 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+ S E R + E V++ + +L N Sbjct: 58 LKGVTSSSLFEARLGRE-KMDKEVHVYAPAYVDSEFDELLEYVDHIV-----------FN 105 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 K+ + + I+ + E P + + + + Sbjct: 106 SFDQLKRYKSRVQGVTSKKIDIGIRVNPEYSEIETPLYDPCYNNSRMGVTLANFRPEDLD 165 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 GVD I ++ + ++ + ++ N++ ++ GGG +H Sbjct: 166 GVD-GIHFHTMCEQNSDTLERTIKVVDEKFGPYIKNMKWLNFGGG----HHITREDYDLD 220 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 I + ++ LEPG + + G LV V+ K+ + + + P Sbjct: 221 TLVRCIQYFQDKYGVQVYLEPGEAIALNTGYLVATVLDTMKNG--MDIAILDTSAECHMP 278 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + N I + G C GD I +PGD L Y Sbjct: 279 DVLAMPYRPNIIDAGKPGEYAYTYRLGGLTCLAGDVIGDYSFKEPLKPGDKLVFCDMAHY 338 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 V++ +N L N + + + ++++ Sbjct: 339 TMVKNHMFNGVNLPAIASYNDEEGIKVIRQFSYEDF 374 >gi|291549276|emb|CBL25538.1| carboxynorspermidine decarboxylase [Ruminococcus torques L2-14] Length = 405 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 70/393 (17%), Positives = 117/393 (29%), Gaps = 22/393 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP Y A+ +N + + A KA SN +G + Sbjct: 22 QNIKTPCYILDEKALIENAKLLGEVAERTGCKMLLAQKAFSNYDCYPFFEPYLAGTEASG 81 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R E VF + + +L + FN S +L + A GK Sbjct: 82 LYEARLGAEEMAGKEVHVFCAGYRADEFEELLQYADHIVFNSPS--QLLRFGRMAKEAGK 139 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + ++ + + Sbjct: 140 SVGLRINPECSTQEGHE------IYDPCAQGSRMGTTRVQWDEAIVKNPELMELLDGVHF 193 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + L + +Q ++ I+ GGG I I Sbjct: 194 HTLCEQDSDDLETTLASVKKQFGDLIAKVKWINFGGGHHITRPG----YDIERLEQCIRM 249 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G L+T V+ + K+ D I+D + M L Y Sbjct: 250 AQEEWKVEVYLEPGEAWALNAGFLLTSVLDVLKNGDTQIAIVDASAACHMPDVLEMPYRP 309 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + I + GP C +GD I + LP GDLL Y ++ T+ Sbjct: 310 PLLGASDETTDSGITVRLGGPTCLSGDVIGDYKFSKLPEYGDLLLFGDMAIYTTCKNNTF 369 Query: 383 NSRLLIPEIMVNGSQFHIIRPRM-TFQELIELD 414 N L IR T Q+L D Sbjct: 370 NGMSLPDI---------WIRHADRTMQQLTAFD 393 >gi|254488014|ref|ZP_05101219.1| decarboxylase, pyridoxal-dependent [Roseobacter sp. GAI101] gi|214044883|gb|EEB85521.1| decarboxylase, pyridoxal-dependent [Roseobacter sp. GAI101] Length = 390 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 80/372 (21%), Positives = 136/372 (36%), Gaps = 20/372 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P S + Y S + + YA+KAN +I+ L GSG D S E+ Sbjct: 32 PTLVVSRERVGIQYDALSAGLG--NAHIHYAVKANPAPEIIRLLVERGSGFDAASRQEIE 89 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + I F K +I A G+ F + ESEL + A + Sbjct: 90 LCLSQGADPKSISFGNTIKRGVDIAFAHSIGVTLFAADCESELDKIATHAPGARVYIRLI 149 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG + +L YA ++ V G+ H+GSQ + Sbjct: 150 VENSLA----------DWPLTRKFGCADTLLPTLLDYAKSVGLV-PYGLSFHVGSQTRKA 198 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 E ++ + L ++ GH++Q +++GGG + P A + Sbjct: 199 EYWNPVLDQVAPLWHAAKAAGHDLQLLNIGGGFPAYHGDVVDAPRGYAAAVMAAVKERFG 258 Query: 268 QCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + I EPGR +VA+ G + +V+ + + + I Y Sbjct: 259 EIAYIMAEPGRGMVAEAGHIAAEVLLVSRKSAVAERRWVYLDIGRFSGLAETEGEAIRYE 318 Query: 327 VNPAGDRLHI-HADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKTGAYGAVQSGT- 381 A D + + GP C++ D + + L R GD + I+ GAY + S Sbjct: 319 FITAHDGGPVGPCVMAGPSCDSADILYERNPVDLPLALRDGDKIMIKNCGAYTSSYSSVG 378 Query: 382 YNSRLLIPEIMV 393 +N +++V Sbjct: 379 FNGFP-PLDVLV 389 >gi|167762855|ref|ZP_02434982.1| hypothetical protein BACSTE_01213 [Bacteroides stercoris ATCC 43183] gi|167699195|gb|EDS15774.1| hypothetical protein BACSTE_01213 [Bacteroides stercoris ATCC 43183] Length = 381 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 67/386 (17%), Positives = 122/386 (31%), Gaps = 20/386 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 +P Y + KN + D + A K+ + S Sbjct: 9 FPSPCYIMEEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVY 68 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R A R T + ++ S ++ + + G+ Sbjct: 69 EARLA--LEEFGSRAHTYSPAYTEADFPEIMRC-SSHITFNSLAQFRRFYPMIQAAGQDI 125 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 RVNP+ + + + +FG+ A LP V G+D Sbjct: 126 SCGIRVNPEYSEVETELYNPCAPGTRFGV----------MAEQLPDVLPQGIDGF-HCHC 174 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 S ++ + L L + I+ +++GGG + L +Y Sbjct: 175 HCESSSYELERTLEHLEAKFSRWFPQIKWLNLGGGHLMTRKDYDVEHLIRLLRGLKERYP 234 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +IILEPG G+L ++V+ I ++ IL+V+ M L Y Sbjct: 235 HL---RIILEPGSAFTWQTGVLASEVVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAV 291 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 GD + G C +GD++ L + G+ + E Y V++ +N Sbjct: 292 RGAEM-GDGGAYVYRLGGNSCLSGDYMGLWSFDHELQIGERIIFEDMIHYTMVKTNMFNG 350 Query: 385 RLLIPEIMV-NGSQFHIIRPRMTFQE 409 M + I R ++++ Sbjct: 351 IHHPAIAMWTKEGKAEIFRK-FSYED 375 >gi|84622901|ref|YP_450273.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366841|dbj|BAE67999.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 398 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 77/355 (21%), Positives = 132/355 (37%), Gaps = 6/355 (1%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 + A + YA KAN+ +++TLA G + S GEL A P ++F G Sbjct: 41 WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWL-HAQQPQAPLLFGG 99 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 GK E+ A +VES SEL+ L A G+ P+ R+N + +++ Sbjct: 100 PGKLNTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLT 159 Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 G FG+ + + P +++ G H+ S + Q Sbjct: 160 MGGHPSPFGLDPDDLDAAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLHLIAAYLRTVQL 219 Query: 224 LRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY--FGNLQCKIILEPGRFLV 280 R ++ GGG G+ Y + + + + + ++ LEPGR++ Sbjct: 220 WRHTYALGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVS 279 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR-LHIHAD 339 A G + +V+ +K+S F I + F P H + Sbjct: 280 ASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRVLRGARTPVLRDTPVT 339 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 +VG +C D +A ++ +A PGD L GAY S + + + Sbjct: 340 LVGQLCTPKDVLARDQSVAALAPGDCLAFPLAGAYAWTISHQHFLMHPAPQMVFL 394 >gi|301772966|ref|XP_002921899.1| PREDICTED: arginine decarboxylase-like [Ailuropoda melanoleuca] Length = 460 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 69/369 (18%), Positives = 126/369 (34%), Gaps = 30/369 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + F Y +K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGTVVRKHFCFLKCLPR--VRPFYTVKCNSSPGVLKVLAELGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPA +I+ + K I +I A + G+ + ++E EL + + S IA Sbjct: 99 VQRIGVPASKIICANPCKQIAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG + L A V++ GV H+GS + Sbjct: 158 ---------TDDSRSLTPLSFKFGATLKSCRHLLENAKRS-HVEVVGVSFHVGSGCPDLH 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 208 AYTQSIADARLVFEMGAELGHGMHILDLGGGFPGLEGAKVRFEEIASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 I+ GR+ V L +I+ K + + + F Sbjct: 268 CGVDILARLGRYYVTSAFTLAVSIIAKKEVLLDQPGREEENGSTPKTIVYHLGEGVYGIF 327 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + + ++ + + GP+ + D +A + GD L E Sbjct: 328 NSVLFDNTCPTPILQKKSSAEQPLYSSSLWGPVADGCDCVAEGLWLPQLHVGDWLVFENM 387 Query: 372 GAYGAVQSG 380 GAY + Sbjct: 388 GAYTVGMAS 396 >gi|55978166|gb|AAV68704.1| LolD-1 [Neotyphodium uncinatum] Length = 420 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 69/372 (18%), Positives = 129/372 (34%), Gaps = 27/372 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I + + + A D +A+K++ ++ +I+TLA G+G D S E+ Sbjct: 33 FFVADLNDIVRKWAAWKKALP--DVTPFFAVKSSYDRRLIQTLATCGAGFDCASVEEIEL 90 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ + AERIVF+ K + + L + GI ++E EL+ L+ + Sbjct: 91 ILSLGIGAERIVFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHHHYPEAQTVLRVF- 149 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + KFG I L L S Sbjct: 150 ---------ADDPTNADPLGTKFGAAREDIDGLVRLVKELNMKLAGASFHAAPSVAVDAA 200 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ + + ++ + R G N +D+GGG + A + Sbjct: 201 AYVRGIRDAAEVFARARRVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFKSQVVEGR 260 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT--------FVILDVAMNDFMRPTLYDAY 320 +I+ EPG L KV++ +++A ++ + N MR + + Sbjct: 261 LRILAEPGTLFSCSPFYLAVKVVARRRNAAAFGNEPATRLYINDGIYSNFMMRFIVNMTF 320 Query: 321 HEI------NYIVNPAGDRLHIHADIVGPICETGDFIALNRKI-ALPRPGDLLYIEKTGA 373 + + + G C++ D I + ++ GD L + GA Sbjct: 321 SPVAVIRKGVWYDQTEQTMRREACSLWGRSCDSNDCINRDCRLDPEVGVGDWLVFKDMGA 380 Query: 374 YGAVQSGTYNSR 385 Y V + T+N Sbjct: 381 YTTVCNTTFNGF 392 >gi|325924786|ref|ZP_08186222.1| diaminopimelate decarboxylase [Xanthomonas perforans 91-118] gi|325544802|gb|EGD16149.1| diaminopimelate decarboxylase [Xanthomonas perforans 91-118] Length = 398 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 77/358 (21%), Positives = 133/358 (37%), Gaps = 6/358 (1%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 + A + YA KAN+ +++TLA G + S GEL A P ++F G Sbjct: 41 WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWL-HAQQPQAPLLFGG 99 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 GK E+ A +VES SEL+ L A G+ P+ R+N + ++ Sbjct: 100 PGKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLM 159 Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 G + FG+ + + P +++ G H+ S + QQ Sbjct: 160 MGGQPSPFGLDPSDLDAAIRRVQANPSLRLEGFHFHLMSHQRSAAAQLHLVAAYLRTVQQ 219 Query: 224 LRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY--FGNLQCKIILEPGRFLV 280 R ++ GGG G+ Y + + + + + ++ LEPGR++ Sbjct: 220 WRQTYALGPLRVNAGGGFGVDYRAPDASFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVS 279 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR-LHIHAD 339 A G + +V+ +K+S F + + F P H + Sbjct: 280 ASCGWYLMEVLDLKRSHGAWFAVARGGTHHFRTPAAQAHDHPFRVLRGTRTPVISDTPVT 339 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGS 396 +VG +C D +A ++ +A PGD L GAY S + + + Sbjct: 340 LVGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFLTEG 397 >gi|256830088|ref|YP_003158816.1| carboxynorspermidine decarboxylase [Desulfomicrobium baculatum DSM 4028] gi|256579264|gb|ACU90400.1| carboxynorspermidine decarboxylase [Desulfomicrobium baculatum DSM 4028] Length = 389 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 112/390 (28%), Gaps = 19/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP + + +N + + + ALK + ++ L + G+ S Sbjct: 12 RQVATPSFVIDLGLLRRNLDVLAEVKERTGCKILLALKGFAMWSLFPVLRQVLDGVCASS 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R E F+ D DL + FN + E + Sbjct: 72 PHEARLGRE-EFKREVHAFAAGYSQADIFDLCTTADHIVFNSFGQLEKFRGLIATEAGRL 130 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I V + + S + + Sbjct: 131 GREIELGVRINPE---------HSEGAVPIYDPCSPGSRLGIRRKDFRPDLLEGVTGLHW 181 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ + + + +Q+++ GGG I + Sbjct: 182 HNLCEQNSDCLERTIAAAEKGFGEFFSRMQYVNFGGGHHITRPDYDVDLLCRLISE---- 237 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + + G LV+ V+ + ++ D VILD ++ M L Y Sbjct: 238 FKARHGVQVYLEPGEAVALNTGYLVSTVLDVTQA-DMPIVILDTSVPAHMPDVLEMPYRP 296 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 G++ + G C GD PGD L Y V++ T+ Sbjct: 297 HIVDSGLPGEKSW-TCRLGGQSCLAGDVAGEYSFDKPLVPGDRLVFTDMAHYSMVKTNTF 355 Query: 383 NSRLLIPEIMV--NGSQFHIIRPRMTFQEL 410 N L + ++R +++ Sbjct: 356 NGIQLPSIAIFEPEDDSMRVVRK-FGYEDF 384 >gi|237752603|ref|ZP_04583083.1| carboxynorspermidine decarboxylase [Helicobacter winghamensis ATCC BAA-430] gi|229376092|gb|EEO26183.1| carboxynorspermidine decarboxylase [Helicobacter winghamensis ATCC BAA-430] Length = 405 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 63/395 (15%), Positives = 107/395 (27%), Gaps = 29/395 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y EKN + + ALK + SG+ Sbjct: 9 KDIPSPCYVLEEEKFEKNLQLLDSVQKRSGAKILLALKGYALWRSFDLAKQYLSGVTASG 68 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R E VFS K + +L S FN + + + + Sbjct: 69 IYEARLGYE-EFGKEVTVFSPSYKLEEMRELVQISNHIIFNSFIQWQTFKDLIDTQNSLR 127 Query: 143 KAP------IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + RVNP + T + + + GI + Sbjct: 128 ERKGLAKIEVGLRVNPKYSEVTPAIYNPCVEGSRLGITPKEFKKGIKKYGLDGI------ 181 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + ++ + L+ + ++ I+ GGG I Sbjct: 182 -SGLHFHTHCEQNSDALKRTLKHFEKHFGEIIPQMRWINFGGGHHITRKDYDVDL----L 236 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK----------TFVILDV 306 +I + + ++ LEPG + G L+ VI I K+ Sbjct: 237 VKIIKDFKKKYKTEVYLEPGEAVGWQCGFLLGSVIDIVKNGIDIAILDVSAAAHMPDCLE 296 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 Y A GP C GD I A + GD + Sbjct: 297 MPYRPNVRNSYLAKAHFKNEKLRLKGEKSYSYRFGGPTCLAGDVIGDYSFKAPLKIGDRI 356 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHI 400 E Y V++ T+N L ++ F + Sbjct: 357 IFEDMVHYTIVKNNTFNGIPLPSIGVIRKNGSFEL 391 >gi|260174601|ref|ZP_05761013.1| carboxynorspermidine decarboxylase [Bacteroides sp. D2] gi|315922865|ref|ZP_07919105.1| carboxynorspermidine decarboxylase [Bacteroides sp. D2] gi|313696740|gb|EFS33575.1| carboxynorspermidine decarboxylase [Bacteroides sp. D2] Length = 379 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 118/388 (30%), Gaps = 20/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y + KN + D + A K+ + S Sbjct: 5 NQFPSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASS 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R AL + ++ + S + + V+ G Sbjct: 65 VYEARLALEEFGSKAH---TYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGS 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 RVNP+ + + + +FGI + + Sbjct: 122 GISCGIRVNPEYSEVETELYNPCAPGTRFGITTDLLPEA-----------LPQGIEGFHC 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 S ++ + L L + I+ +++GGG + L + Sbjct: 171 HCHCESSSYELERTLEHLEAKFAHWFPQIKWLNLGGGHLMTRKDYDTEHLIRLLQGLKAR 230 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 Y +IILEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 231 YPHL---RIILEPGSAFTWQTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQP 287 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + +I + G C +GD++ L + G+ + E Y V++ + Sbjct: 288 AVRGAEMGNEGKYI-YRLGGNSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMF 346 Query: 383 NSRLLIPE-IMVNGSQFHIIRPRMTFQE 409 N I + I + ++++ Sbjct: 347 NGIHHPAIAIWTKEGKAE-IYKQFSYED 373 >gi|87199809|ref|YP_497066.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM 12444] gi|87135490|gb|ABD26232.1| carboxynorspermidine decarboxylase [Novosphingobium aromaticivorans DSM 12444] Length = 399 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 67/399 (16%), Positives = 118/399 (29%), Gaps = 24/399 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P + + N ++ D V ALKA S V + G+ Sbjct: 18 RVDSPAFVVDAARLRANLAVLADVRDRAGIKVLAALKAFSMWKVAPIVGRYLDGVCTSGL 77 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN-QRAVSLGK 142 E A E + K D ++ S FN + + A + G+ Sbjct: 78 WEALLAAE-HYQGEIATYCAAYKAEDMPEILRLSDHVIFNSPGQYDRFKAEIANARTRGE 136 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I R+NP + + G P+ Q+ + + Sbjct: 137 SFDIGLRINPLHAEGEVPRYDPCAPHSRLGFPVDQLVPEHFEGV-----------SGLHF 185 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + + L ++ ++ ++ GGG I D + + Sbjct: 186 HTLCEQDFQPLERTWQALEPRIAPYFGQLKWLNFGGGHHITRAD----YQRDDLVAFLRD 241 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH- 321 C+I LEPG + D GILV V+ + + + A Sbjct: 242 VKARTGCEIYLEPGEAVALDAGILVGTVLDTHWNGMQLAITDISATCHMPDVIEAPYRPA 301 Query: 322 ---EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 E G + GP C GD I R PG Y V+ Sbjct: 302 MLGEFPIDEYEDGGEGPAPVRLGGPSCLAGDVIGDYRLPVPTEPGARFAFLDQAHYSMVK 361 Query: 379 SGTYNSRLLIPEIMVNGSQFHIIRPR-MTFQELIELDSI 416 + T+N L + + + + R ++++ D + Sbjct: 362 TTTFNGVPLPSIWLWDSETDDLEKVRTFSYEDF--RDRL 398 >gi|160884393|ref|ZP_02065396.1| hypothetical protein BACOVA_02371 [Bacteroides ovatus ATCC 8483] gi|237718189|ref|ZP_04548670.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_2_4] gi|156110132|gb|EDO11877.1| hypothetical protein BACOVA_02371 [Bacteroides ovatus ATCC 8483] gi|229452610|gb|EEO58401.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_2_4] Length = 379 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 118/388 (30%), Gaps = 20/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y + KN + D + A K+ + S Sbjct: 5 NQFPSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASS 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R AL + ++ + S + + V+ G Sbjct: 65 VYEARLALEEFGSKAH---TYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGS 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 RVNP+ + + + +FGI + + Sbjct: 122 GISCGIRVNPEYSEVETELYNPCAPGTRFGITADLLPEA-----------LPQGIEGFHC 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 S ++ + L L + I+ +++GGG + L + Sbjct: 171 HCHCESSSYELERTLEHLEAKFAHWFPQIKWLNLGGGHLMTRKDYDTEHLIRLLQGLKAR 230 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 Y +IILEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 231 YPHL---RIILEPGSAFTWQTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQP 287 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + +I + G C +GD++ L + G+ + E Y V++ + Sbjct: 288 AVRGAEMGNEGKYI-YRLGGNSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMF 346 Query: 383 NSRLLIPE-IMVNGSQFHIIRPRMTFQE 409 N I + I + ++++ Sbjct: 347 NGIHHPAIAIWTKEGKAE-IYKQFSYED 373 >gi|293373794|ref|ZP_06620138.1| carboxynorspermidine decarboxylase [Bacteroides ovatus SD CMC 3f] gi|292631193|gb|EFF49827.1| carboxynorspermidine decarboxylase [Bacteroides ovatus SD CMC 3f] Length = 379 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 120/388 (30%), Gaps = 20/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y + KN + D + A K+ + + S Sbjct: 5 NQFPSPCYIMEEELLRKNLSLIKSVADRAGVEIILAFKSFAMWRSFPIFREYINHSTASS 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R AL + ++ + S + + V+ G Sbjct: 65 VYEARLALEEFGSKAH---TYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGS 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 RVNP+ + + + +FGI + + + Sbjct: 122 GISCGIRVNPEYSEVETELYNPCAPGTRFGITADLLPDV-----------LPQGIEGFHC 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 S ++ + L L + I+ +++GGG + L + Sbjct: 171 HCHCESSSYELERTLEHLEAKFAHWFPQIKWLNLGGGHLMTRKDYDTEHLIRLLQGLKAR 230 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 Y +IILEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 231 YPHL---RIILEPGSAFTWQTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQP 287 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + +I + G C +GD++ L + G+ + E Y V++ + Sbjct: 288 AVRGAEMGNEGKYI-YRLGGNSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMF 346 Query: 383 NSRLLIPE-IMVNGSQFHIIRPRMTFQE 409 N I + I + ++++ Sbjct: 347 NGIHHPAIAIWTKEGKAE-IYKQFSYED 373 >gi|328955046|ref|YP_004372379.1| Orn/DAP/Arg decarboxylase 2 [Coriobacterium glomerans PW2] gi|328455370|gb|AEB06564.1| Orn/DAP/Arg decarboxylase 2 [Coriobacterium glomerans PW2] Length = 404 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 84/417 (20%), Positives = 145/417 (34%), Gaps = 32/417 (7%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +LA TP Y + + A + +CYA+KAN+ ++ LA Sbjct: 5 RLLELAAAFGTPLYIFDEAVLAARVDALRRALPDV-VDLCYAVKANT--FIVPGLAGSVE 61 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 ++ S GEL A PA +V SGV K ++ AL E + + Sbjct: 62 RFEVCSPGELAICEAVGAPASDMVISGVYKDAATVEHALA--GPAMPAALTVESSSQLEL 119 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A + V + + ++FG+ +I + V++ G+ Sbjct: 120 IADAAAAAGVRAPVLLRLTSG-----------NQFGLDRSEILRAVDRFAEDERVELLGI 168 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ-HIDVGGGLGIAYHSDHRPPSSSD 255 G+Q + + L L +L ++ G GL ++Y R ++ Sbjct: 169 QFFSGTQKTSLRRIGRELDRLDRLVAELVDEHGWAPGELEYGPGLPVSYFEADRFDETAL 228 Query: 256 YASLIHQYFGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN----D 310 A L G I LE GR + A G +T V+ K +A + + I+D M+ Sbjct: 229 LAELGDMLRGMAFGGRITLEIGRSIAASCGTYLTSVVDTKVNASQRYAIVDGGMHQLVYY 288 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + + +G +I G +C D +A + G +L E Sbjct: 289 GHSMAMRQPPVRLLGAAGSSGAEQAQPWNICGALCTINDILAKQLPVEGLDVGRVLAFET 348 Query: 371 TGAYGAVQS-GTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDSI--PAWLQKT 423 GAY + + SR L +++ + R R + D + P L Sbjct: 349 AGAYCVTEGMSLFLSRDLPAVVLLGVDGAPRLARER------MRTDVLNAPGGLASE 399 >gi|242045460|ref|XP_002460601.1| hypothetical protein SORBIDRAFT_02g031650 [Sorghum bicolor] gi|241923978|gb|EER97122.1| hypothetical protein SORBIDRAFT_02g031650 [Sorghum bicolor] Length = 426 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 63/364 (17%), Positives = 118/364 (32%), Gaps = 19/364 (5%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 + + + + + G+ YA+K N+N A++ LA LG+G D S E+ L Sbjct: 57 VLNLGEVVELFAAWRRGLKGVPP--YYAVKCNTNPALLGALAALGAGFDCASPAEMDAVL 114 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A V A+RI+++ K I+ A + G+ +S E+ L + Sbjct: 115 ALGVTADRIIYANPCKPEAHIEHAARVGVDLTTFDSVEEVDKLRRFHPRCR-----LLLR 169 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 +A + K+G ++ L A + + Sbjct: 170 LKVPDAG---DAARWDLGTKYGARQEEVAPLLRAAQSAGLAVSGVAFHVGSAVSRVGVYD 226 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCK 270 ++ +D+GGG S + ++L + + Sbjct: 227 AAVEAARAVFDAAAARGMPPMRILDIGGGFMAGAASTFQDACDVINSALTRHFGDVPGLQ 286 Query: 271 IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 +I EPGR+ L +V + + +D + + Y V+ Sbjct: 287 VIGEPGRYFAETPFTLAARVFGKRARGEVREYWIDDGFYGTLCCVHVENYVPRPVPVSSR 346 Query: 331 G---------DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + + GP C++ D + + R GD L + GAY V S Sbjct: 347 AAAGDDEGGESDETHPSTVFGPTCDSLDVVVKGYHLPELRIGDWLVFHEVGAYTTVLSCN 406 Query: 382 YNSR 385 +N Sbjct: 407 FNGF 410 >gi|58580977|ref|YP_199993.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425571|gb|AAW74608.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 426 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 77/355 (21%), Positives = 133/355 (37%), Gaps = 6/355 (1%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 + A + YA KAN+ +++TLA G + S GEL A P ++F G Sbjct: 69 WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWL-HAQQPQAPLLFGG 127 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 GK E+ A +VES SEL+ L A G+ P+ R+N + +++ Sbjct: 128 PGKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLT 187 Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 G FG+ + + P +++ G H+ S + Q+ Sbjct: 188 MGGHPSPFGLDPDDLDAAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLHLIAAYLRTVQR 247 Query: 224 LRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY--FGNLQCKIILEPGRFLV 280 R ++ GGG G+ Y + + + + + ++ LEPGR++ Sbjct: 248 WRHTYALGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVS 307 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR-LHIHAD 339 A G + +V+ +K+S F I + F P H + Sbjct: 308 ASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRVLRGARTPVLRDTPVT 367 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 +VG +C D +A ++ +A PGD L GAY S + + + Sbjct: 368 LVGQLCTPKDVLARDQSVAALAPGDCLAFPLAGAYAWTISHQHFLMHPAPQMVFL 422 >gi|295083988|emb|CBK65511.1| carboxynorspermidine decarboxylase [Bacteroides xylanisolvens XB1A] Length = 379 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 119/388 (30%), Gaps = 20/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y + KN N D + A K+ + S Sbjct: 5 NQFPSPCYIMEEELLRKNLCLIKNVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASS 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R AL + ++ + S + + V+ G Sbjct: 65 VYEARLALEEFGSKAH---TYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGS 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 RVNP+ + + + +FGI + + Sbjct: 122 GISCGIRVNPEYSEVETELYNPCAPGTRFGITADLLPDA-----------LPQGIEGFHC 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 S ++ + L L + I+ +++GGG + + L + Sbjct: 171 HCHCESSSYELERTLEHLEAKFSRWFPQIKWLNLGGGHLMTRKGYDTEHLITLLQGLKAR 230 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +IILEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 231 HPHL---RIILEPGSAFTWQTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQP 287 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + +I + G C +GD++ L + G+ + E Y V++ + Sbjct: 288 AVRGAEMGNEGKYI-YRLGGNSCLSGDYMGLWSFDHPLQIGERIVFEDMIHYTMVKTNMF 346 Query: 383 NSRLLIPE-IMVNGSQFHIIRPRMTFQE 409 N I + I + ++++ Sbjct: 347 NGIHHPAIAIWTKEGKAE-IYKQFSYED 373 >gi|253568496|ref|ZP_04845907.1| carboxynorspermidine decarboxylase [Bacteroides sp. 1_1_6] gi|251842569|gb|EES70649.1| carboxynorspermidine decarboxylase [Bacteroides sp. 1_1_6] Length = 379 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 58/386 (15%), Positives = 117/386 (30%), Gaps = 18/386 (4%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 +P Y + KN + D + A K+ + S Sbjct: 6 QFPSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSV 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R AL + ++ + S ++ + V+ G Sbjct: 66 YEARLALEEFGSKAH---TYSPAYTEQDFPEIMRCSSHITFNSMAQFRRFYPMTVAEGSG 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 RVNP+ + + + +FG+ + + Sbjct: 123 ISCGIRVNPEYSEVETELYNPCAPGTRFGMTADLLPDT-----------LPKGIEGFHCH 171 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S + + L+ L ++ I+ +++GGG + L +Y Sbjct: 172 CHCESSSFELERTLQHLEEKFSRWFPQIKWLNLGGGHLMTRKDYDTEHLIKLLQDLKARY 231 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +IILEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 232 PHL---QIILEPGSAFTWQTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPA 288 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + I + G C +GD++ + + G+ + E Y V++ +N Sbjct: 289 VRGAEMGNEGEFI-YRLGGNSCLSGDYMGVWSFDHELQIGERIVFEDMIHYTMVKTNMFN 347 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 + I + ++++ Sbjct: 348 GIHHPAIALWTKEGKAEIYKQFSYED 373 >gi|50303419|ref|XP_451651.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640783|emb|CAH02044.1| KLLA0B02673p [Kluyveromyces lactis] Length = 441 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 73/374 (19%), Positives = 125/374 (33%), Gaps = 30/374 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I + ++ YA+K N N +IK LA + + D S+ E+ + Sbjct: 68 FFVCDLGEISRLRNYWTQILPR--VTPFYAVKCNPNIEIIKRLASMSTNFDCASKSEIEK 125 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V ERI+++ K I A ++G+ ++ EL + + I Sbjct: 126 VLACGVDPERIIYANPCKASSFIRFAAKNGVKKSTFDNIDELYKIKKYHPESELLLRIV- 184 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + K+G + + L L + + GV H+GS Sbjct: 185 ---------TDDSSAQCRLSTKYGCELDDVPVLLETVKELG-LNLIGVSFHVGSGASDFS 234 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + +A K R + S G + GG + + Sbjct: 235 TVTQAVKDGRKVFDMAESRGLPALKMLDVGGGYQFDTITEVADVLNAALDYFFPQETHSD 294 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL-----DVAMNDF-----------M 312 I EPGR+ VA L VI + ++D +I MN + Sbjct: 295 VSFIAEPGRYFVATAFTLAATVIGKRNNSDSESMIYINDGVYGNMNCILFDHQEPSPRVL 354 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKT 371 Y +IN D + I GP C+ D ++ + GD ++ + Sbjct: 355 YHKNRFHYMDINSSSKAKCDACNYKVSIWGPTCDGLDCVSKEYYMKYDLDIGDWVHFDNI 414 Query: 372 GAYGAVQSGTYNSR 385 GAY + +N Sbjct: 415 GAYTCSAATPFNGF 428 >gi|297665628|ref|XP_002811146.1| PREDICTED: LOW QUALITY PROTEIN: arginine decarboxylase-like [Pongo abelii] Length = 461 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 73/368 (19%), Positives = 128/368 (34%), Gaps = 30/368 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPA +I+ + K I +I A + GI + ++E EL + + S IA Sbjct: 99 VQHIGVPASKIICANPCKQIAQIKYAAKHGIRLLSFDNEMELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG+ + L A V++ GV HIGS + Sbjct: 158 ---------TDDSHSLSRLSLKFGVSLKSCRHLLENAKKS-HVEVVGVSFHIGSGCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADARLVFEMGTELGHKMHILDLGGGFPGTEGTKVRFEEIASMINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 I E GR+ V + + + K + + + F Sbjct: 268 CGVDIFAELGRYYVTSAFTVAVSITAKKEVLLDQPGREEENGSTRKTIVYHLDEGVYGIF 327 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P+ ++ + + GP + D +A + GD L + Sbjct: 328 NSVLFDNICPIPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNM 387 Query: 372 GAYGAVQS 379 GAY Sbjct: 388 GAYTVGMG 395 >gi|260683468|ref|YP_003214753.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile CD196] gi|260687064|ref|YP_003218197.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile R20291] gi|260209631|emb|CBA63307.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile CD196] gi|260213080|emb|CBE04462.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile R20291] Length = 414 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 98/376 (26%), Positives = 155/376 (41%), Gaps = 33/376 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y T I + N G D Y++K N ++K++A G G D S E+ Sbjct: 26 PCYIYDETNIIEKCKELKNNILGFDF--LYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 83 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + V I +S GKT +I+ L +S +E++ +N+ + +K I Sbjct: 84 ISSECGVSKYDIYYSSPGKTEIDIETVL--DKCIIIADSITEIELINKISKKHNQKVKIG 141 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NPD K KFGI I + S++ S V + G+ +HI SQ+ Sbjct: 142 IRINPDF-----TMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDF 196 Query: 208 ESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 E ++ + +S NI+ I+ G GLG+AY + P + S + Q Sbjct: 197 EKLGHYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIVF 256 Query: 267 LQCKII-----LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +E GRF+V G K++ IK S K ++I+ +N FMRP + + Sbjct: 257 TNSNTLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIE 316 Query: 322 EINYIVNPAGDRL------------------HIHADIVGPICETGDFIALNRKIALPRPG 363 I V G + ++VG +C + D IA N K+ G Sbjct: 317 NITCGVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLKKANIG 376 Query: 364 DLLYIEKTGAYGAVQS 379 DL+ I G+Y S Sbjct: 377 DLISISNAGSYSYSLS 392 >gi|254975445|ref|ZP_05271917.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile QCD-66c26] gi|255092832|ref|ZP_05322310.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile CIP 107932] gi|255314575|ref|ZP_05356158.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile QCD-76w55] gi|255517249|ref|ZP_05384925.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile QCD-97b34] gi|255650355|ref|ZP_05397257.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile QCD-37x79] gi|306520316|ref|ZP_07406663.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile QCD-32g58] Length = 403 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 98/376 (26%), Positives = 155/376 (41%), Gaps = 33/376 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y T I + N G D Y++K N ++K++A G G D S E+ Sbjct: 15 PCYIYDETNIIEKCKELKNNILGFDF--LYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 72 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + V I +S GKT +I+ L +S +E++ +N+ + +K I Sbjct: 73 ISSECGVSKYDIYYSSPGKTEIDIETVL--DKCIIIADSITEIELINKISKKHNQKVKIG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NPD K KFGI I + S++ S V + G+ +HI SQ+ Sbjct: 131 IRINPDF-----TMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDF 185 Query: 208 ESFHKAFKLLRDLT-QQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 E ++ + +S NI+ I+ G GLG+AY + P + S + Q Sbjct: 186 EKLGHYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIVF 245 Query: 267 LQCKII-----LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +E GRF+V G K++ IK S K ++I+ +N FMRP + + Sbjct: 246 TNSNTLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIE 305 Query: 322 EINYIVNPAGDRL------------------HIHADIVGPICETGDFIALNRKIALPRPG 363 I V G + ++VG +C + D IA N K+ G Sbjct: 306 NITCGVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLKKANIG 365 Query: 364 DLLYIEKTGAYGAVQS 379 DL+ I G+Y S Sbjct: 366 DLISISNAGSYSYSLS 381 >gi|320164368|gb|EFW41267.1| diaminopimelate decarboxylase [Capsaspora owczarzaki ATCC 30864] Length = 459 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 84/417 (20%), Positives = 155/417 (37%), Gaps = 37/417 (8%) Query: 32 YSTTAIEKNYLTFSNAFDG---MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + + AFD D C A+K+N V++ + G GL+ S GEL + Sbjct: 38 LDLDHVRGAIDSVRAAFDADSTTDFCHCLAIKSNPTLRVLQYVVQQGMGLEAASLGELVQ 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE--SELKTLNQRAVSLGKKAPI 146 A+ A PAE IVF KT +EI AL+ G+ + + + + + Sbjct: 98 AIRAGAPAENIVFDSPVKTTEEIRFALKQGVTINLDNMPELDRVAAIAAASGDAASRYRV 157 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP + + + STG KFGI + A ++ + +H+GSQ Sbjct: 158 GLRINPQGASGSLEAFSTGTMTSKFGIGLVDARQEIIAAYKRYSW-LNAIHIHVGSQGIP 216 Query: 207 IESFHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYA---SLIH 261 ++ + + DL + + + I ID+GGG+ + + S+ P+ ++ + Sbjct: 217 MDLMASGVRRMLDLVKDIHAAVGKQQITLIDIGGGMSVNFSSEEITPTFAELSETLQQAA 276 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + + ++ E GR +VA G +++ +K + + + + + +R + Sbjct: 277 PELFSGEYRVFTEFGRSIVAKAGFYASRLEYVKTTGGRQIALQHIGADMAIRTIYHPDKW 336 Query: 322 EINYI--------VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + + DI GP C GD IA R G+ + + G Sbjct: 337 PLRVTLLTSEGALRPVESSEALVETDIAGPCCFAGDIIAHRRPFPQLHSGEYILVHDVGG 396 Query: 374 YGAVQSGTYNSRLLIPEIMV------------------NGSQFHIIRPRMTFQELIE 412 Y YN R QF +++ R T ++ + Sbjct: 397 YYHSSYSKYNLRQAPAVYGFTAATPPVTLEVEHRSTTYEEFQFTLLQARETVEDTLR 453 >gi|116317805|emb|CAH65842.1| OSIGBa0147B06.1 [Oryza sativa Indica Group] Length = 410 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 72/358 (20%), Positives = 128/358 (35%), Gaps = 13/358 (3%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + Y + A G YA+K N + A++ LA LG+G D S E+ Sbjct: 52 FHVLDLAKVVDLYAGWRRALPG--VRPFYAVKCNPDTALLGALAALGAGFDCASRAEIEA 109 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA VP IV++ K + A ++G+ +SE E+ + + S Sbjct: 110 VLALGVPPAAIVYANPCKPGAHVAFAAEAGVNVTTYDSEEEVAKVKRCHPSCE-----LL 164 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + K K + + A+ G+ ++GV H+GS + Sbjct: 165 LRIKAPDCGGVKVDLGLKYGANPDEVLPLLR-----AARRAGLGVAGVSFHVGSGASRAA 219 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A + R G + GG +A + + + A + Sbjct: 220 VYRGAIEAARAAFDAAAGLGMPPMRVLDIGGGFVAGAAFGDAAAVINRALGRYFGDLLPT 279 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 ++I EPGR+ L +VI ++ D +D + + L D+Y + Sbjct: 280 VEVIGEPGRYFAETAFTLAARVIGKRRRGDVREYWIDDGVYGSLNCILLDSYVPRPRPLA 339 Query: 329 PAGDRLHIHA-DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A HA + GP C++ D + ++ D L + GAY ++N Sbjct: 340 GARPGEETHASTVFGPTCDSIDTVVTGYQLPEMSVDDWLVFDDMGAYTTAAGSSFNGF 397 >gi|302337429|ref|YP_003802635.1| carboxynorspermidine decarboxylase [Spirochaeta smaragdinae DSM 11293] gi|301634614|gb|ADK80041.1| carboxynorspermidine decarboxylase [Spirochaeta smaragdinae DSM 11293] Length = 387 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 53/395 (13%), Positives = 118/395 (29%), Gaps = 23/395 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V +P + AI +N + + A K S ++ ++ G+ Sbjct: 14 EAVPSPCFVVDKAAIRRNLAILDSIQKTSGARILLAQKGFSMFSLYPMISQTLKGVCASG 73 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + V + + E + S S+ K + Sbjct: 74 LYEAKLGREAFG---KEVHTYSPAFVPEQFETILELSDHVVFNSFSQWKRFRSSCLPFAG 130 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + RVNP+++ + + G+ + ++ + Sbjct: 131 RVSCGIRVNPEVSTAAVRLYDPSAPGSRLGVTAAEFRP-----------ELLDGIEGLHF 179 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ ++L+ + ++ I+ GGG I + R + Sbjct: 180 HALCEQNADDLERVLKGFHHSFGTWAGRMRWINFGGGHHITRNDYDRALLCRLIEECSDR 239 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 Y + LEPG + + G+LV V+ I ++ + ++ A + + + Sbjct: 240 YGV----DVYLEPGEAVALNSGVLVATVLDIVRNDGRIALLDTSAATHMP--DVLEMPYR 293 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + G C GD I PG L Y V++ T+ Sbjct: 294 PEIAGAGKPGEKRYTYRLGGSSCLAGDVIGTYSFDTPLEPGSRLVFGDMAHYSMVKTTTF 353 Query: 383 NSRLLIPEIMVNGSQFHI-IRPRMTFQELIELDSI 416 N L + + + + + F++ + + Sbjct: 354 NGVPLPAIATYDSATGTLEVVKQFGFEDF--RERL 386 >gi|188994129|ref|YP_001928381.1| carboxynorspermidine decarboxylase [Porphyromonas gingivalis ATCC 33277] gi|188593809|dbj|BAG32784.1| carboxynorspermidine decarboxylase [Porphyromonas gingivalis ATCC 33277] Length = 378 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 60/383 (15%), Positives = 115/383 (30%), Gaps = 19/383 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 +P Y + +N ++ D + A KA + + S E Sbjct: 9 SPAYVLEEDLLRRNLSLIASVADRTGVEIILAFKAYALWRTFPIIREYVPHSTASSVWEA 68 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R A + + Y +V S + + + Sbjct: 69 RLAFEEMGAPAH-----TFSPAYTPEEFPEILRYSSHVTFNSLSQYYLLSPMVKNVGVSL 123 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP+ +A + +FG+ AS L G++ + + Sbjct: 124 GLRINPEYSAVETALYNPCAPGSRFGVS----------ASELGDTLPEGIEGLHFHTLCE 173 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F K L+ + + S + +++GGG + ++ Sbjct: 174 STGFE-LEKTLKIIEDRFASVLEQARWLNMGGGHLMTRRDYDVEHLVQVLNDFSRRHPHL 232 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +I+EPG G L + V+ I + I+DV+ M L Y + Sbjct: 233 H---LIMEPGSAFGWQTGFLKSTVVDIVEHQGIATAIVDVSFTCHMPDCLEMPYKPVIRG 289 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + I G C +GDFI + GD L E Y V++ +N Sbjct: 290 AHQEPVPGLPTYRIGGCSCLSGDFIGDWSFDRPLQVGDELIFEDMLHYTTVKTTMFNGVR 349 Query: 387 LIPEIMVNGSQFHIIRPRMTFQE 409 +++ + R +++ Sbjct: 350 HPDIVLLRTDGKKEVLRRFDYED 372 >gi|188578044|ref|YP_001914973.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188522496|gb|ACD60441.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 398 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 77/355 (21%), Positives = 133/355 (37%), Gaps = 6/355 (1%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 + A + YA KAN+ +++TLA G + S GEL A P ++F G Sbjct: 41 WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWL-HAQQPQAPLLFGG 99 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 GK E+ A +VES SEL+ L A G+ P+ R+N + ++ Sbjct: 100 PGKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLM 159 Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 G FG+ + + P +++ G H+ S + + Q+ Sbjct: 160 MGGHPSPFGLDPDDLDAAMQLLRASPSLRLEGFHFHLMSHQRDAAAQLQLIAAYLRTVQR 219 Query: 224 LRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY--FGNLQCKIILEPGRFLV 280 R ++ GGG G+ Y + + + + + ++ LEPGR++ Sbjct: 220 WRHTYALGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVS 279 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR-LHIHAD 339 A G + +V+ +K+S F I + F P H + Sbjct: 280 ASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRVLRGARTPVLRDTPVT 339 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 +VG +C D +A ++ +A PGD L GAY S + + + Sbjct: 340 LVGQLCTPKDVLARDQSVAALAPGDCLAFPLAGAYAWTISHQHFLMHPAPQMVFL 394 >gi|254571071|ref|XP_002492645.1| Ornithine decarboxylase [Pichia pastoris GS115] gi|238032443|emb|CAY70466.1| Ornithine decarboxylase [Pichia pastoris GS115] gi|328353351|emb|CCA39749.1| ornithine decarboxylase [Pichia pastoris CBS 7435] Length = 466 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 77/399 (19%), Positives = 147/399 (36%), Gaps = 38/399 (9%) Query: 12 HAENVSLEK-LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 H + L+ L ++ F+ + + Y + + YA+K N++ +++ Sbjct: 70 HISAIDLDTCLPEEEES-FFVCDLGEVLRLYKNWCEKLPRIKP--YYAVKCNNDPKLLEV 126 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 LA LG+G D S GE+ L V +RI ++ K+I + A + + ++ EL Sbjct: 127 LATLGTGFDCASTGEINTILNLGVSPDRIAYANPCKSISSVRNAKKVNVNLTTFDNSDEL 186 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + I +T + + + KFG + + L A L Sbjct: 187 YKIAKYHPESRLLLRI----------STDDESAQCRLSTKFGASMSESFDLLRLAKKL-Q 235 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + ++GV H+GS + +A K L ++ G + +DVGGG + + Sbjct: 236 LNVAGVAFHVGSGASDFSAITQATKDSSILFEEGTRLGFKMNILDVGGGFVLQTFDESSR 295 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD---------KTF 301 + KII EPGR+ A L VI+ + + Sbjct: 296 YLREA-CDQYFPEKLFPELKIIAEPGRYFAASAFTLACNVIARRMTTQSSDTTTPTAHAM 354 Query: 302 VILDVAMNDFMRPTLYDAYHE------------INYIVNPAGDRLHIHADIVGPICETGD 349 + ++ + + + LYD + + I I GP C+ D Sbjct: 355 LYVNDGLYNNLNCVLYDHQLPKGKALTINGRFVYDLQFSLPESEKKIPVSIWGPTCDGLD 414 Query: 350 FIALNRKI-ALPRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 I+ + +L GD ++ ++ GAY + + +N Sbjct: 415 CISEMTYVSSLMEVGDWIFFDEIGAYTSAAATAFNGFQK 453 >gi|289663320|ref|ZP_06484901.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 429 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 76/355 (21%), Positives = 131/355 (36%), Gaps = 6/355 (1%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 + A + YA KAN+ +++TLA G + S GEL A P ++F G Sbjct: 41 WMRAQLPPRCELFYAAKANAEPPILRTLAAHVDGFEAASGGELAWL-HAQQPQAALLFGG 99 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 GK E+ A +VES SEL+ L A G+ + R+N + ++ Sbjct: 100 PGKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVSVFLRMNIAVPGAQSTRLM 159 Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 G FG+ + + P +++ G H+ S + QQ Sbjct: 160 MGGHPSPFGLDPCDLDTAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLHLIAAYLRTVQQ 219 Query: 224 LRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPGRFLV 280 R ++ GGG G+ Y + + + + + ++ LEPGR++ Sbjct: 220 WRHTYALGPLRVNAGGGFGVDYLAPELSFDWAGFCAGLPALLHEHGTDLRLRLEPGRYVS 279 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR-LHIHAD 339 A G + +V+ +K+S F + + F P H + Sbjct: 280 ASCGWYLMEVLDLKRSHGAWFAVARGGTHHFRMPAAQAHDHPFRVLRGARAPVLRDTPVT 339 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 +VG +C D +A ++ +A PGD L GAY S + + + Sbjct: 340 LVGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQHFLMHPAPQMVFL 394 >gi|260432794|ref|ZP_05786765.1| carboxynorspermidine decarboxylase [Silicibacter lacuscaerulensis ITI-1157] gi|260416622|gb|EEX09881.1| carboxynorspermidine decarboxylase [Silicibacter lacuscaerulensis ITI-1157] Length = 389 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 66/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + V +P + A+EKN + + V ALKA S A+ + G Sbjct: 21 NRVPSPCFVVDEKAVEKNLRILAEIGERSGAHVLSALKAFSMFALAPVVRQYLGGTCASG 80 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R E F K D ++ S FN ++ + + Sbjct: 81 IYEARLGRE-EYGGEVATFCAGYKDSDIDEILALSDHIIFNSPAQKDRFLPKAQ----AA 135 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + R+NP+ + K + G P+ Q+ + + Sbjct: 136 GRQVGLRINPEHSEGEVAKYDPCAPCSRLGTPVSQLDAKALEGVD-----------GLHM 184 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + + +L ++++ ++ GGG I I Sbjct: 185 HTLCEQGFEPLARTWAAVEPKLAPFLNDLKWLNFGGGHHITRSD----YDRDGLVDFIKH 240 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 +I LEPG + D GILV +++ + I D++ M + Y Sbjct: 241 IRAKYGVEIYLEPGEAVALDAGILVGEILDLPH-NGMDLAITDISATCHMPDVIEAPYRP 299 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 G + GP C GD I + G Y V++ T+ Sbjct: 300 ALMDEAETG----HTYRLGGPSCLAGDVIGDYTWAEPLQIGQRFAFLDQAHYSMVKTNTF 355 Query: 383 NSRLLIPEIMVNGSQFHI-IRPRMTFQEL 410 N L + N + I + + + Sbjct: 356 NGVPLPTIALWNSETDDLKIIKQFGYDDF 384 >gi|313114514|ref|ZP_07800028.1| putative carboxynorspermidine decarboxylase [Faecalibacterium cf. prausnitzii KLE1255] gi|310623137|gb|EFQ06578.1| putative carboxynorspermidine decarboxylase [Faecalibacterium cf. prausnitzii KLE1255] Length = 405 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 111/386 (28%), Gaps = 15/386 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E LA + TP Y + +N + A KA SN V LA +G Sbjct: 19 EALAS-LPTPCYLLDEGQLRRNGELLLGVQQRTGCKILLAQKAFSNFNVYPVLAPYLAGT 77 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 + E R E VF + + +L + FN S+ +A Sbjct: 78 EASGLYESRLGKEELPEKENHVFCAAYRADEFAELLQYADHIVFNSPSQLAKFGPAAKAA 137 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + H + G Q + LP + Sbjct: 138 GKSVGLRLNPECSTQ---EGHAIYDPCAPGSRLGTTRAQWDAAVQADPALPELLDGLHFH 194 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + Q + + + ++ ++ GGG I + Sbjct: 195 TLCEQDADALALTL-----AAVEAKFGGLLPRMKWLNFGGGHHITRPG----YRLATLEQ 245 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I + ++ LEPG + G LVT V+ ++ + + ILD++ + Sbjct: 246 CITETQKKYGVQVYLEPGEAWALNAGYLVTTVLDTLQNGETSLAILDMSAACHTPDVIEM 305 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 Y G++ + GP C GD + + G L Y + Sbjct: 306 PYRPPLLDAGDPGEKP-YLIRLGGPTCLAGDVVGDYSFASPLTEGQRLIFGDMAIYTTCK 364 Query: 379 SGTYNSRLLIPE-IMVNGSQFHIIRP 403 + T+N L P M + Sbjct: 365 NNTFNGMPLPPIWAMDENGTCRELVK 390 >gi|238059466|ref|ZP_04604175.1| diaminopimelate decarboxylase [Micromonospora sp. ATCC 39149] gi|237881277|gb|EEP70105.1| diaminopimelate decarboxylase [Micromonospora sp. ATCC 39149] Length = 429 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 78/344 (22%), Positives = 129/344 (37%), Gaps = 10/344 (2%) Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 VCYA+KANS + V+ LA G ++ S E A + +V +G K+ + Sbjct: 62 AKVCYAVKANSYRPVVAALAGHVDGFEVASAAEATLARSVRPDGL-LVAAGPAKSDTLLR 120 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 + G+ NVES EL+ +++ A L + + RVNP A K +FG Sbjct: 121 HLIAHGVDMINVESLHELRRVDRIAAELDQPVAVTLRVNPRRVAVAGALAMG-GKATQFG 179 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 IP + + A L + G +H+ + + Q + Sbjct: 180 IPEADVPEVLEQARALRRTDVVGFHLHVVGNNLDAATHVAYLRWCLQFAQDTAARHGVQL 239 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 + GG + L+ C+++LEPGR+LV D G +V+ Sbjct: 240 RVVDIGGGIGVSFGRGPHFDVRRFGELVADVRPPADCQVVLEPGRYLVTDCGWYAAEVLD 299 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEI-------NYIVNPAGDRLHIHADIVGPIC 345 +K + FV+L +N F P +D H P + +VG +C Sbjct: 300 VKHAYGTWFVVLRGGINHFALPVSWDILHPFTVVPVARWPYPWPRPEVRDAPVTVVGELC 359 Query: 346 ETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLI 388 T D + + + R GDL+ G+YG + + Sbjct: 360 TTEDTLVRDMTVDRVRAGDLVVFPDAGSYGWEFALPEFLGHPRA 403 >gi|262197919|ref|YP_003269128.1| Orn/DAP/Arg decarboxylase 2 [Haliangium ochraceum DSM 14365] gi|262081266|gb|ACY17235.1| Orn/DAP/Arg decarboxylase 2 [Haliangium ochraceum DSM 14365] Length = 582 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 85/395 (21%), Positives = 154/395 (38%), Gaps = 9/395 (2%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + L + + A+ N+ + G +CY +K N + AV++ +A G Sbjct: 27 LDFRALLARFGSNVWVLHECALRDNFAAWRE-LAGAAERICYPVKTNPSPAVLERIAAWG 85 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT-LN 134 + S EL+ A A +R+++ + L+ G +E+ Sbjct: 86 GRAECASLAELQLARLAGFSEQRLLYGSPALNLQVAWSLLEDGGTVVVDSAEALASLDER 145 Query: 135 QRAVSLGKKAPIAFRVNPDINA---NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + RVNP I+ T + G + S L + Sbjct: 146 ASRAPALPPGRVLLRVNPSISIRYRKTQPWTDLIAHASQRGKFGIPSEEIIELVSGLRAL 205 Query: 192 KISGVDMHIGSQIDQIESFHK-AFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +I G+ H+G+Q+D IE F A L+ + + +D+GGGLGI + Sbjct: 206 RICGLHAHVGTQMDHIEPFAILAEHLIALADAITERSAQPLSILDLGGGLGIPCTAAEDF 265 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P + A + + + LEPG +V + L+ + S+K D+ + I D + Sbjct: 266 PRIAALAPVTEMVANSGREAW-LEPGSAMVGNTVGLLAAIASVKTMRDRRWAIADAGTDQ 324 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 ++ TL YH+I A + GP+C +GD + +++ RPGD ++++ Sbjct: 325 LVKITLSQWYHQILGPDGQPLPMQGDDA-LGGPLCFSGDVLLPATEVSGLRPGDPIFVQH 383 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPR 404 TGAY A + +N R +++ I R Sbjct: 384 TGAYFAAIANRFNGRRPGGTVVIRADGSAERIHRR 418 >gi|224061945|ref|XP_002300677.1| predicted protein [Populus trichocarpa] gi|222842403|gb|EEE79950.1| predicted protein [Populus trichocarpa] Length = 381 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 68/381 (17%), Positives = 115/381 (30%), Gaps = 23/381 (6%) Query: 21 LAHVVQT--PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++ +T PFY + ++ YA+K N A++ +LA L S Sbjct: 5 ISKEQETKEPFYVLDLGVVSALLDKWTRTLP--IVRPFYAVKYNPVPALLGSLAALSSNF 62 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S+ E+ L+ V +RIV++ K I A G+ +S+ EL + + Sbjct: 63 DCASQAEIELVLSLGVSLDRIVYANPCKPGSHIKYAASVGVNLTTFDSKEELDKIQKWHP 122 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 I + D A K+G ++ A T + Sbjct: 123 KCAL--LIRIKALDDSRA-------RCLLGSKYGALPEEVTPFLEAAQTARLNVVGVSFH 173 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 R + +++GGG D S + Sbjct: 174 IGNRATYSQAYEGAIASAKSVFEAAARFGMPRMTILNIGGGFTAGSLFDEAATSIKP--A 231 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD--------VAMND 310 L + II EPGRF L T VI + + ++ +ND Sbjct: 232 LQAYFPNEPGLTIISEPGRFFAESPFTLATNVIGKRVRGELREYWINDGIYGSLNCILND 291 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 T N + + GP C+ D + ++ + D L Sbjct: 292 HATITCTPLACNSNSANPTCKGEKSYSSMVFGPTCDALDTVLTVHQLPELQVDDWLVFPN 351 Query: 371 TGAYGAVQSGTYNSRLLIPEI 391 GAY A ++N + Sbjct: 352 MGAYTAAAGSSFNGFNTAAIL 372 >gi|254510022|ref|ZP_05122089.1| carboxynorspermidine decarboxylase [Rhodobacteraceae bacterium KLH11] gi|221533733|gb|EEE36721.1| carboxynorspermidine decarboxylase [Rhodobacteraceae bacterium KLH11] Length = 389 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 115/389 (29%), Gaps = 26/389 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + V P + AIE+N S V ALKA S ++ + +G Sbjct: 21 NRVPAPCFVVDKKAIERNLSILSGVGTRSGAHVLCALKAFSMFSLAPLVRQYLAGTCASG 80 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R E F K D ++ S FN ++ + Sbjct: 81 IYEARLGRE-DYGGEVATFCAGYKGADIDEILSLSDHIIFNSPAQKNRFLAKAQ----AA 135 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + R+NP+ + K + G+P+ Q+ + + Sbjct: 136 GVQVGLRINPEHSEGEIPKYDPCAPCSRLGMPVSQLTAATLTGVD-----------GLHM 184 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + + +L ++ ++ GGG I + I Sbjct: 185 HTLCEQGVEPLLRTWEAVQPKLAPFMSRLKWLNFGGGHHITRDD----YDRDGLVAFIRD 240 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + LEPG + + GILV +++ + + I D++ M + Y Sbjct: 241 IRKTYDIDVYLEPGEAVALNAGILVGEILDLP-TNGMNLAITDISATCHMPDVIEAPYRP 299 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 AG + GP C GD I G Y V++ T+ Sbjct: 300 ALMGEAEAG----HTYRLGGPSCLAGDVIGDYTWDHPLEIGQRFVFLDQAHYSMVKTNTF 355 Query: 383 NSRLLIPEIMVNGSQFHI-IRPRMTFQEL 410 N L + N + I + + + Sbjct: 356 NGVPLPAIALWNSETDDLKIIKQFGYDDF 384 >gi|197302665|ref|ZP_03167719.1| hypothetical protein RUMLAC_01395 [Ruminococcus lactaris ATCC 29176] gi|197298247|gb|EDY32793.1| hypothetical protein RUMLAC_01395 [Ruminococcus lactaris ATCC 29176] Length = 404 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 68/378 (17%), Positives = 117/378 (30%), Gaps = 17/378 (4%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 E S E L + +P Y T +E N + V A KA SN L Sbjct: 12 EEYSPEDLFRRLPSPSYVIDETQLECNGFCLLAVAERTGCKVLLAQKAFSNYNFYPLLEP 71 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 +G + E R E VF + + +L + FN + + Sbjct: 72 YLAGTEASGLYEARLGKEEMGGKEVHVFCAAYREDEFDELLEYADHIVFNSPGQLKKLGE 131 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 +A + + + H + G Q + + Sbjct: 132 RAKAQGKSIGLRVNPECSTQ---DGHDIYDPCAPGSRLGTTREQWNQEM-------TEDL 181 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + I ++ +R + + ++ +++GGG I H R Sbjct: 182 ISLLDGIHFHTLCEQNADALEVTMRAVEDKFGDILPRMKWVNLGGGHHITRHDYERSRLE 241 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 S+ + ++ LEPG + + G LV++V+ I K+ + ILD + M Sbjct: 242 ELLLSIKKK----WDVQVYLEPGEAVALNAGYLVSRVLDIVKNGETQIAILDASAACHMP 297 Query: 314 PTLYDAYHEINYIVNPAGDRL---HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 L Y Y D + GP C GD I + GD++ Sbjct: 298 DVLEMPYQPPIYNAAKQPDEGGQYQHRYRLAGPTCLAGDVIGDYYFPKELKAGDMVIFGD 357 Query: 371 TGAYGAVQSGTYNSRLLI 388 Y ++ T+N L Sbjct: 358 MAIYTTCKNNTFNGMPLP 375 >gi|255539092|ref|XP_002510611.1| ornithine decarboxylase, putative [Ricinus communis] gi|223551312|gb|EEF52798.1| ornithine decarboxylase, putative [Ricinus communis] Length = 416 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 70/366 (19%), Positives = 131/366 (35%), Gaps = 23/366 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY A+ +S + YA+K NS ++I LA LG D S+ E++ Sbjct: 50 FYVLDLGAVAGLMHKWSRELPMI--QPYYAVKCNSEISLIGALAALGCNFDCASKAEIQS 107 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ V +RI+++ K I A + +S+ EL +++ I Sbjct: 108 ILSLGVSPDRIIYANPSKPESHIIYAANVDVNLTTFDSKHELHKISKCHPKCSL--LIRI 165 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + D A KFG + + A+ + ISGV HIGS+ Sbjct: 166 KPPDDSGA-------RWPLGSKFG-ALPEEIEPLLLAAQAAKLTISGVSFHIGSESRNPH 217 Query: 209 SFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ A + + R ++ +++GGG + D A+L + N Sbjct: 218 AYRGAIGAAKHVFDTASRLGMPPMRVLNIGGGFIAGSNFDEAATVIK--AALQDYFGDNP 275 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 +II EPGR+ V +L T + + ++ + ++ + Sbjct: 276 GIEIISEPGRYFAETVFMLATSITGKRVRGGIIEYWINDGVFGSFSCVIFGVSPPACVPL 335 Query: 328 NPAGDR--------LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +R + + GP C+ D + +++++ D L GAY + Sbjct: 336 ACTSNRANPKCKGEPTYKSTVYGPTCDAVDKVFVDQELPELEINDWLVFPYMGAYTTANA 395 Query: 380 GTYNSR 385 + Sbjct: 396 TIFQGF 401 >gi|109087149|ref|XP_001082807.1| PREDICTED: antizyme inhibitor 1 isoform 3 [Macaca mulatta] gi|109087153|ref|XP_001083647.1| PREDICTED: antizyme inhibitor 1 isoform 7 [Macaca mulatta] gi|297299897|ref|XP_002805501.1| PREDICTED: antizyme inhibitor 1 [Macaca mulatta] Length = 448 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 72/378 (19%), Positives = 119/378 (31%), Gaps = 28/378 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCKHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQY 263 + A R + G + +D+GGG + P Y Sbjct: 207 VYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGV 266 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMR 313 + F +A I V + K + + + D F Sbjct: 267 KIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFAS 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 D D + + GP C+ D I + + GD L + GA Sbjct: 327 KLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGA 386 Query: 374 YGAVQSGTYNSRLLIPEI 391 + +N Sbjct: 387 DSFHEPSAFNDFQRPAIY 404 >gi|86140068|ref|ZP_01058631.1| carboxynorspermidine decarboxylase [Roseobacter sp. MED193] gi|85823163|gb|EAQ43375.1| carboxynorspermidine decarboxylase [Roseobacter sp. MED193] Length = 389 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 74/372 (19%), Positives = 125/372 (33%), Gaps = 27/372 (7%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V TP + A+E+N + ++ + V ALKA S ++ + H SG Sbjct: 22 RVPTPCFVVDEKAVERNLMVLADVAERSGAHVLAALKAFSMFSLAPLVCHYLSGTCASGL 81 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A E F K + ++ S FN ++ + Sbjct: 82 HEARLARE-EYGGEVATFCAGYKDSEIEEIIALSDHMIFNSVAQKDRFLA----RCQAAS 136 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + R+NP+ + K + G PI Q+ A+ L GV + Sbjct: 137 KQVGLRINPEHSEGEIAKYDPCAPCSRLGTPISQL-----TAAALDGVD------GLHMH 185 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + F + + +L ++ ++ GGG I I + Sbjct: 186 TLCEQGFAPLARTWAAIEPKLGPFLGQLKWLNFGGGHHITRDD----YDRDALVDFILEI 241 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + LEPG + D GILV +V+ + ++ +D+A+ D E Sbjct: 242 RSKYHVDVYLEPGEAVALDAGILVGEVLDLPRNG------VDLAITDISATCHMPDVIEA 295 Query: 324 NYIVNPAGDRLHIH-ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 Y G+ H GP C GD I + + GD Y V++ T+ Sbjct: 296 PYRPALLGEVETGHSYRFGGPSCLAGDVIGDYKMAQPLQIGDRFAFLDQAHYSMVKTNTF 355 Query: 383 NSRLLIPEIMVN 394 N L ++ N Sbjct: 356 NGVALPAILLWN 367 >gi|290991901|ref|XP_002678573.1| ornithine decarboxylase [Naegleria gruberi] gi|284092186|gb|EFC45829.1| ornithine decarboxylase [Naegleria gruberi] Length = 543 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 76/433 (17%), Positives = 137/433 (31%), Gaps = 87/433 (20%) Query: 29 FYCYSTTAIEKNYLTFSNAF------------DGMDTMVCYALKANSNQAVIKTLAHLGS 76 F+ + I + + A D YA+K N N+ ++K L +G Sbjct: 111 FFVVDLSHIVRQIERWRKAMTIYPKDQQKIEIDDRGVRPFYAVKCNPNENIVKVLYMMGC 170 Query: 77 GLDIVSEGELRRALAAPV----------------------------------PAERIVFS 102 G D SE E+ P I+F+ Sbjct: 171 GFDCASEAEIALVCETCKEVDTWLENNQQFYESLTIVNPDPSLEQIKNRRFVPGRDIIFA 230 Query: 103 GVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKI 162 K I ++ A + G+ ++S E++ + + + I T Sbjct: 231 HPCKQISHMEYAAKVGVELTTLDSVCEIEKIAEHWKAAKCVIRI----------KTDDSH 280 Query: 163 STGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ 222 +T KFG L A L I G+ H+G+ S+ KA + +L + Sbjct: 281 ATVGFSAKFGCSKFGQTILLEKAKALGV-NIYGISFHVGTNCSDTNSYKKALQDAAELAK 339 Query: 223 QLRSNGHNIQHIDVGGGLGIAYHSDHRP--------PSSSDYA------SLIHQYFGNLQ 268 G+ + ID+GGG + ++ P + Sbjct: 340 LAIKYGYKLSLIDIGGGFMGRINDENPMETVASQIVPEIQKLFLRDESTNADDSIIDPKT 399 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKS--------------ADKTFVILDVAMNDFMRP 314 K+I EPGR++V+ LV V ++K D L+ + Sbjct: 400 IKLIAEPGRYIVSASHTLVCNVHTVKDMRLENEQLKKEGIPTPDDFIYYLNDGIYGSFNN 459 Query: 315 TLYDAYHEINYIVNPAGDRLHIHA--DIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 ++D H + ++ + + GP C++ D ++ + GD L+ G Sbjct: 460 IVFDYVHLVVNMIMSKSTKHEKKYASTLFGPTCDSLDCLSRGYPLPELHAGDYLFFNNFG 519 Query: 373 AYGAVQSGTYNSR 385 AY + +N Sbjct: 520 AYTTAAASDFNGM 532 >gi|166713024|ref|ZP_02244231.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 398 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 77/355 (21%), Positives = 134/355 (37%), Gaps = 6/355 (1%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 + A + YA KAN+ +++TLA G + S GEL A P ++F G Sbjct: 41 WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWL-HAQQPQAPLLFGG 99 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 GK E+ A +VES SEL+ L A G+ P+ R+N + +++ Sbjct: 100 PGKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLT 159 Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 G FG+ + + P +++ G H+ S + + Q+ Sbjct: 160 MGGHPSPFGLDPDDLDAAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLQLIAAYLRTVQR 219 Query: 224 LRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY--FGNLQCKIILEPGRFLV 280 R ++ GGG G+ Y + + + + + ++ LEPGR++ Sbjct: 220 WRHTYALGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVS 279 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR-LHIHAD 339 A G + +V+ +K+S F I + F P H + Sbjct: 280 ASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRVLRGARTPVLRDTPVT 339 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 +VG +C D +A ++ +A PGD L GAY S + + + Sbjct: 340 LVGQLCTPKDVLARDQSVAALAPGDCLAFPLAGAYAWTISHQHFLMHPAPQMVFL 394 >gi|123403224|ref|XP_001302198.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] gi|121883464|gb|EAX89268.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] Length = 397 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 78/378 (20%), Positives = 139/378 (36%), Gaps = 21/378 (5%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 + + + + + + YA+K +++ LA G G D S+ EL+ Sbjct: 34 WIADLNKVRYSTQLWESYLPRVKA--HYAVKCCDEPNILRFLADRGFGFDCASKKELQMI 91 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 V A RIVFS K + + A + G+ ++E EL+ + + + + Sbjct: 92 TELGVDANRIVFSHPLKNHEALVYAKELGVDRMAFDTEEELRKILRYYPEAEVFLRVKPK 151 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 KFG + +L A L G H+GS D I + Sbjct: 152 FTNA----------KIPLSKKFGAAPEDVPNLLQLAHELGA-NFIGFSFHVGSLCDDINT 200 Query: 210 FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS--DHRPPSSSDYASLIHQYFGNL 267 F A + + +L + G N+ ID+GGG + + + I ++FG Sbjct: 201 FRTALQYVSELKVKAEELGLNVCFIDIGGGFLPPNAPCNNSFKEITETINAAIDEFFGEN 260 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM-----NDFMRPTLYDAYHE 322 + + I EPGRF ++ L+ VI K D +YD Sbjct: 261 EIEFIGEPGRFFASEYMDLILPVIGAKVHVDGHGEKTQSIYIPDGIYGAFNALIYDHAEP 320 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + ++ G+ + I G C++ D + + GDLL I + AY + + Sbjct: 321 H-FEIHTEGESEKLPTTIWGQTCDSADIVYEDMMWPELEVGDLLIIRRFSAYTYSPTAFF 379 Query: 383 NSRLLIPEIMVNGSQFHI 400 N P +++N ++ I Sbjct: 380 NGFHHHPVVVLNANEEDI 397 >gi|289667147|ref|ZP_06488222.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 429 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 77/355 (21%), Positives = 131/355 (36%), Gaps = 6/355 (1%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 + A + YA KAN+ V++TLA G + S GEL A P ++F G Sbjct: 41 WMRAQLPPQCELFYAAKANAEPPVLRTLAAHVDGFEAASGGELAWL-HAQQPQAALLFGG 99 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 GK E+ A +VES SEL+ L A G+ + R+N + ++ Sbjct: 100 PGKLDTELVQAAALPDCTVHVESLSELERLAAIAAHAGRCVSVFLRMNIAVPGAQSTRLM 159 Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 G FG+ + + P +++ G H+ S + QQ Sbjct: 160 MGGHPSPFGLDPCDLDTAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLHLIAAYLRTVQQ 219 Query: 224 LRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL--EPGRFLV 280 R ++ GGG G+ Y + + + + + + L EPGR++ Sbjct: 220 WRHTYALGPLRVNAGGGFGVDYLAPELSFDWAGFCAGLPALLHEHGTDLHLRLEPGRYVS 279 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR-LHIHAD 339 A G + +V+ +K+S F + + F P H + Sbjct: 280 ASCGWYLMEVLDLKRSHGAWFAVARGGTHHFRTPAAQAHDHPFRVLRGARAPVLRDTPVT 339 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 +VG +C D +A ++ +A+ PGD L GAY S + + + Sbjct: 340 LVGQLCTPKDVLARDQHVAVLAPGDCLAFPLAGAYAWNISHQHFLMHPAPQMVFL 394 >gi|85708349|ref|ZP_01039415.1| carboxynorspermidine decarboxylase [Erythrobacter sp. NAP1] gi|85689883|gb|EAQ29886.1| carboxynorspermidine decarboxylase [Erythrobacter sp. NAP1] Length = 397 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 68/400 (17%), Positives = 123/400 (30%), Gaps = 28/400 (7%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSN-----AFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 V +P + I +N ++ A DG V ALKA S +V + G+ Sbjct: 18 RVDSPSFVVDAAKIRENCQILADIRDAAASDGASIKVFAALKAFSMWSVAPIMGEYLDGV 77 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK-TLNQRA 137 E R A + +S K D ++ S FN ++ + + +A Sbjct: 78 STSGLWEARLASE-FYDGDIATYSAAFKPEDLEEICRLSEHVIFNSPAQMQRAALILDQA 136 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G + R+NP + K + G PI Q+ + Sbjct: 137 QVTGGDVSVGLRLNPMVATGEVPKYDPSAPGSRLGFPIDQLTEEHMEGV----------- 185 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 I ++F + + + ++ I++GGG I Sbjct: 186 EGIHFHNLCEQTFEPLRQTWDRVFDVIEPWFGQLKWINMGGGHHITRAD----YERDKLV 241 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + + +II+EPG + D G V ++ + I ++ Sbjct: 242 EFLRDAAEDTGAEIIIEPGEAVALDAG---ILVGTLLDTGFNDVPIGITDISATCHMPDV 298 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 ++ D I + GP C GD I R PG Y V Sbjct: 299 LEAPYRPAMLGELTDEDKIPIRLGGPSCLAGDVIGDYRLPVPADPGARFAFLDQAHYSMV 358 Query: 378 QSGTYNSRLLIPEIMVNGSQFHI-IRPRMTFQELIELDSI 416 ++ T+N L + + + R +++ D + Sbjct: 359 KTNTFNGVPLPSIWLWDSETDALDCVKRFEYEDF--RDRL 396 >gi|196016998|ref|XP_002118347.1| hypothetical protein TRIADDRAFT_62377 [Trichoplax adhaerens] gi|190579063|gb|EDV19169.1| hypothetical protein TRIADDRAFT_62377 [Trichoplax adhaerens] Length = 391 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 72/361 (19%), Positives = 133/361 (36%), Gaps = 33/361 (9%) Query: 52 DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 + + YA+K N++ +++TL +LG D S GE++ L A V +RI+++ K I + Sbjct: 13 NVEIFYAMKCNNDPVLLRTLINLGVSFDCASLGEIQSILNAGVNPDRIIYANTIKAISHL 72 Query: 112 DLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF 171 A + + ++E EL + + + I + S + KF Sbjct: 73 RFAKEKNVNLTVFDNEDELYKIKKYHPNAKLAIRICPDMEV--------CESRFQLGIKF 124 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 G + L A +L + GV H+GS ++ K + + + G++ Sbjct: 125 GAAKADVAHLLEVAQSLKL-NVVGVSFHVGSDCLTPIAYEKGIITSKQIFKLAEKFGYHF 183 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILVTK 289 +D+GGG + ++ S + L +II EPGR+ LV Sbjct: 184 NLLDIGGGFTAFSALETTFAKAAAVISKALQKYFPPELGVRIIAEPGRYFATRACTLVLN 243 Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA------------------- 330 VI + + D + + + ++ Y VN + Sbjct: 244 VIGRRVVRKGNGDLFDFEHENAHLYKNTNDFEKVLYYVNDSVYGCLNILPIDHALITLKP 303 Query: 331 ---GDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 A + G C++ D + + GD +Y E+TGAY + +NS Sbjct: 304 VKSNTHGEETAVLFGQTCDSLDCLMKECLLPKLNAGDWVYFEETGAYSLSLASKFNSFKK 363 Query: 388 I 388 Sbjct: 364 P 364 >gi|207109674|ref|ZP_03243836.1| diaminopimelate decarboxylase [Helicobacter pylori HPKX_438_CA4C1] Length = 113 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 1/107 (0%) Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 MNDF+RP+LY ++ P+ R D+VGP+CE+ D + + PGD + Sbjct: 1 MNDFLRPSLY-HAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKDVHLPELEPGDKIA 59 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 IEK GAYG+ + YNSR + E+ + + +IR R ++L L+ Sbjct: 60 IEKVGAYGSSMASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 106 >gi|224535493|ref|ZP_03676032.1| hypothetical protein BACCELL_00356 [Bacteroides cellulosilyticus DSM 14838] gi|224522886|gb|EEF91991.1| hypothetical protein BACCELL_00356 [Bacteroides cellulosilyticus DSM 14838] Length = 285 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 95/279 (34%), Positives = 146/279 (52%), Gaps = 6/279 (2%) Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 ++L I+CFNVES EL+ +N+ A + GK A I+FR+NP++ A+TH I+TG E+KFG Sbjct: 1 MSLDYNIFCFNVESIPELEVINELAAAKGKIANISFRINPNVGAHTHANITTGLAENKFG 60 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 I + + + A + VK G+ HIGSQI + F + +L +L ++ I+ Sbjct: 61 ISMQDMGHVIEVALEMKNVKFIGLHFHIGSQILDMGDFVALCNRVNELQDKLEAHRIRIE 120 Query: 233 HIDVGGG---LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 HI+VGGG + P +++ + E GR + G L+++ Sbjct: 121 HINVGGGLGIDYKHPNRQAIPDFKDYFSTYAEHLKLRSYQTLHFELGRAITGQCGSLISQ 180 Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 V+ +K+ A+K F ILD M D +RP LY AYH I N + D+VGPICE+ D Sbjct: 181 VLYVKQGANKKFAILDAGMTDLIRPALYQAYH---KIENITSEDAVEAYDVVGPICESSD 237 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + + GDL+ + GAYG + + +YN R L Sbjct: 238 VFGKAIDLNKVKRGDLIALRSAGAYGEIMASSYNCRELP 276 >gi|260642514|ref|ZP_05416160.2| carboxynorspermidine decarboxylase [Bacteroides finegoldii DSM 17565] gi|260621759|gb|EEX44630.1| carboxynorspermidine decarboxylase [Bacteroides finegoldii DSM 17565] Length = 380 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 115/388 (29%), Gaps = 20/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +P Y + KN + D + A K+ + S Sbjct: 6 AQFPSPCYIMEEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIRHSTASS 65 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R A + T + ++ S ++ + V+ G Sbjct: 66 VYEARLA--LEEFGSKAHTYSPAYTEQDFPEIMRC-SSHITFNSMAQFERFYSMTVTEGS 122 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 RVNP+ + + + +FGI + + Sbjct: 123 GISCGIRVNPEYSEVETELYNPCAPGTRFGITADLLPET-----------LPQGIEGFHC 171 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 S ++ + L L + I+ +++GGG + Sbjct: 172 HCHCESSSYELERTLEHLESKFSRWFPQIKWLNLGGGHLMTRKDYDTEHLIKLL---KEL 228 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 +IILEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 229 RTRYPHLQIILEPGSAFTWQTGVLASEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQP 288 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + +I + G C +GD++ L + G+ + E Y V++ + Sbjct: 289 AVSGAEMGNEGKYI-YRLGGNSCLSGDYMGLWSFDHKLQIGERIVFEDMIHYTMVKTNMF 347 Query: 383 NSRLLIPE-IMVNGSQFHIIRPRMTFQE 409 N I + I + ++++ Sbjct: 348 NGIHHPAIAIWTKEGKAE-IYKQFSYED 374 >gi|3360285|gb|AAC27893.1| ornithine decarboxylase [Haemonchus contortus] Length = 422 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 131/362 (36%), Gaps = 24/362 (6%) Query: 54 MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 YA+K N+++ +++TLA LG+G D S E+ + V AERIV++ KT I Sbjct: 65 EPFYAVKCNTDRVLVRTLAALGTGFDCASREEIDIVMDLGVSAERIVYANPCKTRSFITH 124 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 A + + +S EL + Q IA + KFG Sbjct: 125 AKERNVSMMTFDSAEELAKVAQLHPQAKMILRIAVS----------DPTARCPLNLKFGA 174 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 ++ + GV + G+ H+GS + ++ +A R L + R G ++ Sbjct: 175 DPVKMAPQLLVHAQELGVDVIGISFHVGSGCNDPTAYREALAHARHLIELGRGLGLDMTL 234 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYAS-LIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 +D+GGG ++ S + ++I EPGRF A LV +I Sbjct: 235 VDLGGGYPGTPQQTSFEDIAAVIRSAVDEYLPPEFGVRLIAEPGRFFAAAPFTLVCNIIH 294 Query: 293 ------------IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI 340 + ++ F+ + + + + I Sbjct: 295 ATEVSAEKITKRPEDVEERGFMYYVNDGVYGSFNCILFDHVQPVGTPLFDEIAQEYPSTI 354 Query: 341 VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI-PEIMVNGSQFH 399 GP C++ D I + + + G+ + GAY S T+N M+N + Sbjct: 355 WGPTCDSLDKIEDQKLMRMMSVGEWIVYRNMGAYTCSASTTFNGFQRPNAIYMINRKNWA 414 Query: 400 II 401 I Sbjct: 415 RI 416 >gi|88601236|gb|ABD46616.1| diaminopimelate decarboxylase-like protein [Glaucocystis nostochinearum] Length = 162 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 2/159 (1%) Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 P+ I I++EPGR +V + G+LV KV +K + +K F++ D +M + Sbjct: 1 PTPGHLIDTIKDLILANDIGIMVEPGRSIVGNTGMLVNKVTGVKTNGNKNFIVTDGSMAE 60 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 +RP+LYDA+ I++I +G DIVGP+CE+ DF+ +R + P G + + Sbjct: 61 LIRPSLYDAFMYIDFIEPVSG--AEKEFDIVGPVCESADFLGKDRMLPTPPEGAGIAVFD 118 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 GAY S YN ++ PE +V+G + +IR + E Sbjct: 119 AGAYSYCMSSNYNMKMRPPEYLVDGDKVTLIRKGESLDE 157 >gi|303248030|ref|ZP_07334296.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio fructosovorans JJ] gi|302490587|gb|EFL50492.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio fructosovorans JJ] Length = 426 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 91/359 (25%), Positives = 148/359 (41%), Gaps = 8/359 (2%) Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 N V+ LA LG+G + S E+R AL A A RIVF KT +E+ LA+ G+ Sbjct: 52 NPLPPVLAFLAGLGAGAEAASLPEVRLALDAGFTAGRIVFDSPAKTFEELRLAVSLGLNV 111 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 + E++ L SLG+ RVNP + K S KFG+P+ ++ Sbjct: 112 NADNLD-EVERLGTVGASLGRAPRAGLRVNPQVGLGRIKATSVAGVYSKFGVPLADREAI 170 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A + P ++ V + + L R ++ D+GGGL Sbjct: 171 LAAFARCPWLEGLHVHIGSQGCSLDMLVAGVGAIYDLALEINARLGARRVRRFDLGGGLP 230 Query: 242 IAYHSDHRPPSSSDYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 +AY PP+ YA+ + + + Q ++ E GRFL A G+ V++V +K+ Sbjct: 231 VAYRDTDDPPTPGVYAAALAERCPGLFSGQFDLVTEFGRFLHAPCGLAVSRVEYVKRQPG 290 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEI----NYIVNPAGDRLHIHADIVGPICETGDFIALN 354 +L + + F+R + GP+C +GDF Sbjct: 291 HNTAVLHLGADMFVRECYNPELWTHGVTLLSPDGREKGGERGTWHLAGPLCFSGDFPIRQ 350 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 ++ PGDL+ I GAY YNSR + + +F+++R R ++L+ Sbjct: 351 ARLPDVAPGDLVAIHDVGAYTLAMWSRYNSRQMPRILGYRQGRFNVLREREEPEDLVRF 409 >gi|255034946|ref|YP_003085567.1| carboxynorspermidine decarboxylase [Dyadobacter fermentans DSM 18053] gi|254947702|gb|ACT92402.1| carboxynorspermidine decarboxylase [Dyadobacter fermentans DSM 18053] Length = 385 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 62/383 (16%), Positives = 115/383 (30%), Gaps = 18/383 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P + + KN + + ALK S + + SG S Sbjct: 6 KEIPSPCFILEEELLRKNLELIDSVQQAAGCQIILALKGFSMYSAFPIVKEYLSGATASS 65 Query: 83 EGELRRALAAPVPAERIVF--SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E++ G+ + + + + + + +A + Sbjct: 66 LNEVKLINDFMGYQSHTYMPAYLDGEFEEIMQRSSHITFNSLSQWERFQGRVEAYKAANP 125 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 K RVNP + + + G+ ++ LP + Sbjct: 126 DKTLSCGIRVNPQYSEVATDMYNPCVPGSRLGVTRDKLPDE------LPAGIDGIHFHTL 179 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + L L ++ H + +++GGG + S L+ Sbjct: 180 CENGSDT-----LERTLAALEERFGDLLHQAKWLNMGGGHLMTREG----YDISKLIKLV 230 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 ++ILEPG + GIL T V+ + S ILD + M TL Y Sbjct: 231 STIKEKYNLEVILEPGSAIAWRTGILYTMVLDVLDSQGIDVAILDTSFAAHMPDTLEMPY 290 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + + + G C GD++ GD + E Y V++ Sbjct: 291 KPVIRGAYQDPEPGKPTYRMGGMTCLAGDYMGDYSFDQPLAAGDKIIFEDMIHYTMVKTT 350 Query: 381 TYNSRLLIPE-IMVNGSQFHIIR 402 T+N L I +F ++R Sbjct: 351 TFNGVNLPSIGIWKADQKFQLVR 373 >gi|296227426|ref|XP_002759367.1| PREDICTED: antizyme inhibitor 1 isoform 1 [Callithrix jacchus] gi|296227428|ref|XP_002759368.1| PREDICTED: antizyme inhibitor 1 isoform 2 [Callithrix jacchus] gi|296227430|ref|XP_002759369.1| PREDICTED: antizyme inhibitor 1 isoform 3 [Callithrix jacchus] Length = 448 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 76/379 (20%), Positives = 124/379 (32%), Gaps = 30/379 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +D+GGG L + Sbjct: 207 VYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVIS-PLLDIYFPEGSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSAD----------------KTFVILDVAMNDFM 312 KII EPG + V+ L +I+ K + + + D F Sbjct: 266 VKIISEPGSYYVSSAFTLAVNIIAKKVVENDKFSSGVEKTGSDEPAFMYYVNDGVYGSFA 325 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 D D + + GP C+ D I + + GD L + G Sbjct: 326 SKLSEDLNAIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMG 385 Query: 373 AYGAVQSGTYNSRLLIPEI 391 A + +N Sbjct: 386 ADSFHEPSAFNDFQRPAIY 404 >gi|313896306|ref|ZP_07829859.1| carboxynorspermidine decarboxylase [Selenomonas sp. oral taxon 137 str. F0430] gi|312975105|gb|EFR40567.1| carboxynorspermidine decarboxylase [Selenomonas sp. oral taxon 137 str. F0430] Length = 380 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 100/388 (25%), Gaps = 24/388 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y + N + V A K S + +G Sbjct: 13 AAVPTPSYLVYEELLTHNLEILKGLAERTGAKVLLAQKCFSMYYYYPLIGRYLAGTTASG 72 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + + E VF + + LA FN S+ E RA Sbjct: 73 IYEARLSQE-EMGKENHVFKPAYEAEEITALAAICDHIVFNSFSQWERFGAAARAQGGSC 131 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + A + K + + Sbjct: 132 GIRINPERSTQEQAIYDPCAPGSRLGVKIAEFPETLPEGIDGLHFHTLCE---------- 181 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + L + ++ H ++ ++ GGG I Sbjct: 182 -----QGADALAVTLAAVEEKFGKYLHGLKWLNFGGGHHITRADYDVALLEELI----RH 232 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + LEPG + + G L V+ ++ + P + + + Sbjct: 233 VQETYDVAVYLEPGEAVALNAGYLAASVLDVRADGNVILNTSAACHM----PDVIEMPYR 288 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + GP C GD I A PGDL+ Y V++ T+ Sbjct: 289 PPVVGAGEAREKAHTYTLAGPTCLAGDTIGTYSFDAPLAPGDLVVFGDMAIYTMVKNNTF 348 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 N L + V+ S +++ Sbjct: 349 NGMPLPHIVAVDPSGAWETVRSFGYEDF 376 >gi|291513891|emb|CBK63101.1| carboxynorspermidine decarboxylase [Alistipes shahii WAL 8301] Length = 379 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 63/388 (16%), Positives = 119/388 (30%), Gaps = 20/388 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + +P Y +++N T + ALKA + ++ LA G S Sbjct: 6 KLPSPCYVLDEELLDRNLATVDRVRRESGAEIIVALKACAMWSIFPELAKHSDGATASSA 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R ++ V + ++ S FN S+ + Sbjct: 66 AEARLVFEEFGRPAH-TYAPVYTDSNIDEILNCSDHITFNSLSQFRRFGQKALINGISC- 123 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 R+NP + + + G+ Q+ + + + G+ + Sbjct: 124 ---GLRINPQYSPVETDLYNPCVPGSRLGVTAEQLAAHGGLPAGVEGLHFHVLCES---- 176 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 K L + + I+ +++GGG + A L Sbjct: 177 -----RPEHLQKALEAVETHFGAYLDRIKWLNMGGGHL---MTASWYDCDRLIALLKAFR 228 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + ++ILEPG G LV+ V I ++ T +LDV+ M L Y Sbjct: 229 SRHPNLRLILEPGSAFTWRTGFLVSTVEDIVENGGVTTAMLDVSFACHMPDCLEMPYKPA 288 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + D + G C GD+ + G+ + E Y V++ +N Sbjct: 289 VIGAHEPADGEK-RWRMGGTSCLAGDYCGDWAFDRELKVGERVVFEDMIHYTMVKTTMFN 347 Query: 384 SRLLIP-EIMVNGSQFHIIRPRMTFQEL 410 I + +IR +++ Sbjct: 348 GVHHPAIVIARRDGRTDVIRE-FGYEDF 374 >gi|85373773|ref|YP_457835.1| carboxynorspermidine decarboxylase [Erythrobacter litoralis HTCC2594] gi|84786856|gb|ABC63038.1| carboxynorspermidine decarboxylase [Erythrobacter litoralis HTCC2594] Length = 415 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 64/413 (15%), Positives = 120/413 (29%), Gaps = 34/413 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + V +P + + N + D +T + ALKA S +V + G+ Sbjct: 17 NRVDSPAFVVDAAKLRANLQILAEIRDVSETKMLSALKAFSMFSVAPIIGEYLDGVCTSG 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN-QRAVSLG 141 E R A E + K D ++ S FN + E L ++A G Sbjct: 77 LFEARLASE-FYDGEISTYCAAYKPEDLEEVCRLSDHVIFNSPQQIERARLILEQAQVTG 135 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + + + G PI Q+ +I I Sbjct: 136 GDFSVGLRINPQVPTGEVPRYDPSSPGSRLGFPIDQL-----------TPEIMEGIEGIH 184 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + F + + + ++ I++GGG I R Sbjct: 185 FHNLCEQDFEPLHRTWDKVFDAIEPWFGQLKWINMGGGHHITRADYQREELVELLKDAKE 244 Query: 262 QYFGNLQCKI-----------ILEPGRFLVADVGILVTKVISIKKSAD-----KTFVILD 305 + + + V +V +T V + D +L Sbjct: 245 DTGAEIYLEPGEAVALDAGILVGTILDNGVNEVPFAITDVSATCHMPDVIEAPYRPAMLH 304 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP-RPGD 364 + + + PA + GP C GD I + + P PG Sbjct: 305 ENIEASPSESWDLSQTGSEPREAPAFAGAQGAVRLGGPSCLAGDVIG-DYHLPEPNEPGQ 363 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHI-IRPRMTFQELIELDSI 416 + Y V++ T+N L + + + + +++ D + Sbjct: 364 RIAFLDQAHYSMVKTNTFNGVPLPSIWLWDSETDQLELVKEFGYEDF--RDRL 414 >gi|129277532|ref|NP_001076080.1| antizyme inhibitor 1 [Bos taurus] gi|126717437|gb|AAI33310.1| AZIN1 protein [Bos taurus] gi|296480504|gb|DAA22619.1| ornithine decarboxylase antizyme inhibitor [Bos taurus] Length = 448 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 74/378 (19%), Positives = 121/378 (32%), Gaps = 28/378 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQIKP--FYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I G+ KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDSIGGGEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQY 263 + A R + G + +D+GGG + P Y Sbjct: 207 VYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGI 266 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMR 313 + F +A + V + K S+ + + D F Sbjct: 267 KIISEPGSYFVSSAFTLAVNIVAKKVVENDKFSSGVGKTGSDEPAFMYYMNDGVYGSFAS 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 D D + + GP C+ D I N + GD L + GA Sbjct: 327 KLSEDLNTIPEVHKKYKADEPLFTSSLWGPSCDELDQIVENCLLPELNVGDWLIFDNMGA 386 Query: 374 YGAVQSGTYNSRLLIPEI 391 + +N Sbjct: 387 DSVHEPSAFNDFQRPAIY 404 >gi|254293834|ref|YP_003059857.1| Orn/DAP/Arg decarboxylase 2 [Hirschia baltica ATCC 49814] gi|254042365|gb|ACT59160.1| Orn/DAP/Arg decarboxylase 2 [Hirschia baltica ATCC 49814] Length = 415 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 75/367 (20%), Positives = 123/367 (33%), Gaps = 21/367 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP +E+NY A + YA+KAN + ++K L LG + S E Sbjct: 57 PTPHLVVELDVVERNYKALKTALPRANH--HYAIKANPHPDLLKRLNKLGCYFECASIQE 114 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + LAA A+ I++ K EI A Q G+ + ++ EL + A Sbjct: 115 IDMCLAAGAQAKDILYGNPLKKASEIKAAYQRGVEQYVFDAALELDKIITHAPGSKVICR 174 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I T + KFG P + A++ + Q++ Sbjct: 175 IT----------TDGSGAVSPLSIKFGCPPEKALDWLLKANSSGLIAHGISFHTGSQQLN 224 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS--DHRPPSSSDYASLIHQY 263 + ++ +DVGGG Y A + +Y Sbjct: 225 PASWNAPIRAAAEVFEALRKQGVDTMKVLDVGGGFPTNYRKTVPPITTFCDAIAHYVAKY 284 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 F I EPGR+L AD G ++ +V+ + S + + + +I Sbjct: 285 FKTNAPLIYTEPGRYLPADAGFILAEVVLVAPSHTNPDIRW---VYLDIGRYGGLVETQI 341 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALN---RKIAL-PRPGDLLYIEKTGAYGAVQS 379 +Y V + + G C++ D I + PGD + + TG Y S Sbjct: 342 DYPVYTHHEGEVGPVIMAGQTCDSNDVIYAEEFRYHLPKALTPGDRVILAHTGVYTTTYS 401 Query: 380 GTYNSRL 386 T N Sbjct: 402 TTLNGFP 408 >gi|322387825|ref|ZP_08061433.1| carboxynorspermidine decarboxylase [Streptococcus infantis ATCC 700779] gi|321141327|gb|EFX36824.1| carboxynorspermidine decarboxylase [Streptococcus infantis ATCC 700779] Length = 375 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 74/390 (18%), Positives = 126/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E+N + V A KA S ++ SG Sbjct: 4 EQVPTPSYIIDLGKLEENCRILQEVQEKAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L S FN E + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKESDMEELLQISDHIDFNS----ERQLRKYGHRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ + +I S L V Sbjct: 119 GISVGLRINPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + Q + H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------DQFGAYLHQVKWLNMGGGHHITRDDYDVYL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + + +EPG + + G L T+V+ I ++ +T V+ A + + + Sbjct: 224 RIRETYNVDVYIEPGEAIALNAGYLATEVLDIVENGIETLVLDASASCHMP--DVLEMPY 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + C TGD I GD LY E Y V++ T Sbjct: 282 RPPLRDGFEAQEKPYTYRLSSNTCLTGDIIGDYSFEKPIEIGDRLYFEDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ + ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDKEGECSLV-KAFGYQDF 370 >gi|39894|emb|CAA34876.1| unnamed protein product [Bacillus subtilis] Length = 327 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 79/297 (26%), Positives = 117/297 (39%), Gaps = 12/297 (4%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQA 66 G L V LA TP Y Y I + +F AF G+ V YA KA S+ A Sbjct: 15 GHLEIGGVDALYLAEKYGTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVA 74 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I+ G LD+VS R L F + L + Sbjct: 75 MIQLAEEEGLSLDVVSGESYIRLLQQAFRQNASTFMETIRAGKNCGWRLSTASAALWWII 134 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA--Y 184 + L G + R+ P + A+TH I+TG+++ KFG +H + A Sbjct: 135 SMKSSLLEDLCKETGHSIDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQ 194 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS-NGHNIQHIDVGGGLGIA 243 +++ GV HIGSQI F A + + + R + +++GGG GI Sbjct: 195 VLQSEHIQLLGVHCHIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIR 254 Query: 244 YHSDHRPPSSSDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISI 293 Y D P +++Y I + +G +I +EPGR LV D G + V S Sbjct: 255 YTEDDEPLHATEYVEKIIEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQ 311 >gi|325829969|ref|ZP_08163427.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Eggerthella sp. HGA1] gi|325488136|gb|EGC90573.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Eggerthella sp. HGA1] Length = 412 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 82/405 (20%), Positives = 153/405 (37%), Gaps = 25/405 (6%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 + ++ +L+ TP Y + + + +CYA+KAN +++ Sbjct: 1 MMIDDATLQNALDACPTPLYLFDQQVLNDRITRLRASLP-SRIKLCYAMKANP--FIVRE 57 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + L ++ S GE+ A VP E+IV SGV K +D Q+ ES Sbjct: 58 ASALADCVEACSPGEVLICANAGVPFEKIVLSGVWKDRRCLDDLFQADRIPHRFTIESSQ 117 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + ++ + + ++FG+ + L A P Sbjct: 118 QLKDLVELANAYRRRVNVLFRLSSE-------------NQFGVDSATLKELIAGCKDDPF 164 Query: 191 VKISGVDMHIGSQIDQIES-FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + I G+ + G+Q ++ + KL R + + + + I+ G GL + Y ++ Sbjct: 165 ISIQGIQYYSGTQKTSLKKLDRELSKLHRIVAEVEAACSVKLNEIEYGPGLPVEYFDENE 224 Query: 250 PPSSSDYASLIHQY-----FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + S + + + I+LE GR + AD G +T V+ +K ++ + + I+ Sbjct: 225 ERARSAQDEPVAELATLLDGFPFEGDIVLELGRSIAADCGAYLTSVVDVKTTSGQNYAIV 284 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D M+ A + A +I G +C D +A I GD Sbjct: 285 DGGMHQISYYGHSMAMKSPVFRKVGATAGAAQPWNICGALCTVNDIMAKQASIVDLSVGD 344 Query: 365 LLYIEKTGAYGAVQS-GTYNSRLLIPEIMVN-GSQFHIIRPR-MT 406 +L + GAY A + + SR L ++ + I R R T Sbjct: 345 VLAFSRAGAYCATEGRALFLSRDLPSVVVRDVSGNMRIARHRLET 389 >gi|83310487|ref|YP_420751.1| diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1] gi|82945328|dbj|BAE50192.1| Diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1] Length = 376 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 90/361 (24%), Positives = 135/361 (37%), Gaps = 20/361 (5%) Query: 40 NYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERI 99 NY V YA+KAN +++ L GS D+ S GE+ LA PAERI Sbjct: 29 NYHGLRRWLPL--AEVYYAVKANPAPEIVRMLTEEGSRFDVASRGEIDLCLANGAPAERI 86 Query: 100 VFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTH 159 F K +I A G+ + +SE+EL+ L + A I + Sbjct: 87 SFGNTIKKQSDIAYAYAKGVRLYAFDSEAELEKLAEAAPGSRVFCRILMTCDGA------ 140 Query: 160 KKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD 219 KFG I L A + + GV H+GSQ + + A Sbjct: 141 ----EWPLSRKFGCEIDMAKDLLVKAREMG-LDPYGVSFHVGSQQTDLRQWDIAVGKAAM 195 Query: 220 LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGR 277 L L + G ++ +++GGG Y + A + +FGN +I+EPGR Sbjct: 196 LFSALDAAGIELRMVNLGGGFPARYRKEVDGLERYAEAVMDAMTKHFGNNIPSMIIEPGR 255 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR-LHI 336 LV D GIL T+V+ I + V I Y + D Sbjct: 256 SLVGDAGILETEVVLISRKGYDDDVRWVYLDVGKFGGLAETMDEAIKYRIVTTRDGDDTA 315 Query: 337 HADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIM 392 + GP C++ D + ++ L + GD + I TGAY S +N + Sbjct: 316 PVVLAGPTCDSADILYEKAGYEMPLSLKVGDKVRILSTGAYTTSYSAVNFNGFEPLKAYF 375 Query: 393 V 393 + Sbjct: 376 I 376 >gi|46578835|ref|YP_009643.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|46448247|gb|AAS94902.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris str. Hildenborough] gi|311232698|gb|ADP85552.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris RCH1] Length = 390 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 56/395 (14%), Positives = 111/395 (28%), Gaps = 28/395 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL----GSGL 78 +P + + N V ALK + + L+ G Sbjct: 13 ARFPSPCFVIDEDRLVANAAILDEVQRRTGARVLLALKGFAAWSTFPLLSRAQGGVLHGT 72 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 S E R E F+ D +L + FN + + + Sbjct: 73 CASSPHEARLGRE-TFGGEVHAFAAGYSEDDMAELVTIADHIVFNSFA--QWRRYRPVVE 129 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + G+ RVNP+ + + + G+ Sbjct: 130 ASGRHIECGIRVNPEHSEGAVAIYNPCSPGSRLGVRERHFEPQSLEGI-----------T 178 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + + + L + ++ ++ GGG I Sbjct: 179 GLHFHTLCEQDAGALSRTLDAFESKFGRYLEGMRWVNFGGGHHITREGYDLDL----LCR 234 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I + ++ +EPG + D G+L+ V+ + ++ ++ A + + Sbjct: 235 CIERIRDRYGVQVYIEPGEAVALDAGVLLCSVLDVVQADVPVVILDTSAAAHMP--DVLE 292 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + I + D + G C GD + RPGD L Y V+ Sbjct: 293 MPYRPGCIGSGLPDEKAWTCRLAGKSCLAGDVVGDYSFDRPLRPGDRLAFLDMAIYSMVK 352 Query: 379 SGTYNSRLLIPEIMVN--GSQFHIIRPR--MTFQE 409 + T+N L + + ++R TF++ Sbjct: 353 TTTFNGLQLPAIALYRASSGKREVVRTFGYETFRD 387 >gi|310827389|ref|YP_003959746.1| putative pyridoxal-dependent decarboxylase [Eubacterium limosum KIST612] gi|308739123|gb|ADO36783.1| putative pyridoxal-dependent decarboxylase [Eubacterium limosum KIST612] Length = 407 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 71/411 (17%), Positives = 134/411 (32%), Gaps = 33/411 (8%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLG 75 + +L FY + + N+ N F + + Y+ K N K + LG Sbjct: 8 ISRLRSQYGEAFYLLDSEQFKNNFTELKNIFSAIYPNFNIAYSYKTNYTPKFCKIVNELG 67 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VSE E+ AL V +RI+++G K +++ L +G N +S E K + Sbjct: 68 GYAEVVSEMEMELALKCGVEPKRIIWNGPIKDSEKMREFLVAG-GTVNSDSIDETKEIRD 126 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A S+ + R N D++ F I +T + Sbjct: 127 FANSVETILNVGIRCNYDVHDG-------VVSRFGFDITGDDFKRALEIVTTSKNLHFIN 179 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 H + + K + ++ Q I G D Sbjct: 180 FHCHFAKRQIEYWPAR--AKGMINVLDQFGVIPERIDIGGGLFGKMPESLKAQFTADIPD 237 Query: 256 YASLIHQYFGNLQ---------CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 Y + ++++EPG LV D V V +IK K + Sbjct: 238 YQAYAEVAAAVFAEYFNDKEIKPELVIEPGSALVGDCMKFVGSVKTIKNVRGKYIATVLG 297 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 + + + +++ + + + D+VG C GD + + GD++ Sbjct: 298 SQ----KNISMAGINPPMEVIHMNEGKQYENLDMVGFTCIEGDVLNKDY-CGELAAGDVI 352 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEIMVNG-----SQ-FHIIRPRMTFQELI 411 I G+Y V + P + + + +I+ TF ++ Sbjct: 353 IINNCGSYSLVMKPPFI-LPNFPVVDICNMNIETGEGVELIKRGETFDDIF 402 >gi|290962739|ref|YP_003493921.1| siderophore biosynthesis decarboxylase [Streptomyces scabiei 87.22] gi|260652265|emb|CBG75398.1| putative siderophore biosynthesis decarboxylase [Streptomyces scabiei 87.22] Length = 426 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 74/372 (19%), Positives = 130/372 (34%), Gaps = 13/372 (3%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y TA+ + A + YA KAN ++ L G ++ S GEL Sbjct: 51 PAYVYDMTALRDHAARVRAALPE-RVELYYAAKANPEPEILAALGPYVDGYEVASGGELA 109 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ--RAVSLGKKAP 145 A P + F G GKT DEI AL+ G+ F+VESE EL+ L + R + + Sbjct: 110 HVAQAV-PGRPLAFGGPGKTPDEIRDALERGVARFHVESEHELRMLGELARRAAPARPVG 168 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R N + + + + + G + + + + Sbjct: 169 VLLRFNLAVADGSLAGSALAMGGRPAPFGLDPGRAADVLRPLTDGTHPHLEPLGVHAHLA 228 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + R + + ++ ++VGGG+ + Y + +Y + + + Sbjct: 229 SGLDAPSLLSVARSVVDWATALDMPVREVNVGGGMAVDYTRPESRFAWQEYGAGLARLTD 288 Query: 266 NLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI- 323 + +EPGR L A G T+V+ +K+S + F ++ + P Sbjct: 289 AHPDLTLRIEPGRALTAYCGWYATEVLDVKRSHGEEFAVVRGGTHHLRTPATKGHDQPCS 348 Query: 324 ------NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 P + G +C D +A + + R GD + GAY Sbjct: 349 VLAVERWPHPWPRPSAEGERVTLAGQLCTPKDVLARHVRAPGLRAGDRVAFALAGAYAWN 408 Query: 378 QSGT-YNSRLLI 388 S + Sbjct: 409 ISHHDFLMHPHP 420 >gi|325970205|ref|YP_004246396.1| diaminopimelate decarboxylase [Spirochaeta sp. Buddy] gi|324025443|gb|ADY12202.1| Diaminopimelate decarboxylase [Spirochaeta sp. Buddy] Length = 400 Score = 129 bits (324), Expect = 9e-28, Method: Composition-based stats. Identities = 79/406 (19%), Positives = 136/406 (33%), Gaps = 28/406 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLG 75 L KL FY + +N+ +AF + Y+ K N + K + LG Sbjct: 6 LFKLQKEFGNAFYLVDSARFRENFRELRDAFSLIYPKFNIAYSYKTNYTPKLCKIVNDLG 65 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS+ E+ AL V E+I+++G K +++ L +G Sbjct: 66 GYAEVVSDMEMEIALRVGVKPEKIIWNGPIKNYSKVEGFLLAGGKVNLDSLYEVPLIKTI 125 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 KK I RVN +IN + D F L KI Sbjct: 126 ADKHPEKKIQIGIRVNFEINDGVISRFGFDVDSDDFKEA-------------LALTKIQN 172 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY------HSDHR 249 + ++ + + L S + +D+GGGL D Sbjct: 173 IHLYGMQCHFATRKLETWKPRAEGMIRLLDSLNIIPEIVDLGGGLFGKMADSLKSQFDSD 232 Query: 250 PPSSSDYASLIHQYFGNLQ----CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 P+ ++YA+ I F +ILEPG LV D T V +IK K + Sbjct: 233 IPTYNEYAAEIAPLFAERYGNDGPMLILEPGSALVGDCMQFATTVENIKNIRGKAIATVL 292 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 ++ + + + D G C D+I + + GD+ Sbjct: 293 GSIYNINPTLN-KKNPPLEVVSCGIVQEFFQDLDFGGFTCIESDYIYRHYQ-GNIAVGDM 350 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + G+Y V + P + ++ ++ I++ F +L Sbjct: 351 VIFGNAGSYSIVLKPPFI-LPNFPVLDISEAEVEILKRGEAFDDLF 395 >gi|53713816|ref|YP_099808.1| carboxynorspermidine decarboxylase [Bacteroides fragilis YCH46] gi|52216681|dbj|BAD49274.1| carboxynorspermidine decarboxylase [Bacteroides fragilis YCH46] Length = 379 Score = 129 bits (324), Expect = 9e-28, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 119/387 (30%), Gaps = 20/387 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 +P Y + KN + D + A K+ + S Sbjct: 6 QFPSPCYIMEEELLRKNLSLIKSVADDAGVEIILAFKSFAMWRSFPIFREYIGHSTASSV 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A + T + ++ S S+ V+ G Sbjct: 66 YEARLA--LEEFGSKAHTYSPAYTEADFPEIMRC-SSHITFNSLSQFSRFYPLTVAEGSG 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 RVNP+ + + + +FGI + + ++ Sbjct: 123 ISCGIRVNPEYSEVETELYNPCAPGTRFGITADLLPA-----------RLPQGIEGFHCH 171 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S + + L+ L ++ I+ +++GGG + + L +Y Sbjct: 172 CHCESSSFELERTLQHLEEKFSPWFSQIKWLNLGGGHLMTRKDYDTRHLTGLLQGLKKRY 231 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +IILEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 232 PHL---RIILEPGSAFTWQTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPS 288 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + + G C +GD++ + G+ + E Y V++ +N Sbjct: 289 VRGAVMGEEGPFV-YRLGGNSCLSGDYMGSWSFDHELQAGERIVFEDMIHYTMVKTNMFN 347 Query: 384 SRLLIPEIMVN-GSQFHIIRPRMTFQE 409 + + I R ++++ Sbjct: 348 GIHHPAIALWTADGKAEIFRQ-FSYED 373 >gi|300693403|ref|YP_003749376.1| diaminopimelate decarboxylase protein (lysa) [Ralstonia solanacearum PSI07] gi|299075440|emb|CBJ34735.1| putative diaminopimelate decarboxylase protein (lysA) [Ralstonia solanacearum PSI07] Length = 413 Score = 129 bits (324), Expect = 9e-28, Method: Composition-based stats. Identities = 103/393 (26%), Positives = 165/393 (41%), Gaps = 25/393 (6%) Query: 19 EKLAHVV----QTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 +L +P Y Y + + S + YA+KANS+ V+ L Sbjct: 3 RELIERYLHGATSPVCAYLYDLDHLRERARRLSAMLP-AGCELFYAIKANSDAPVLAALD 61 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 +G ++ S GE+ RA A RIVF G GKT DE+ AL+ G+ + ESE +L+ Sbjct: 62 GAVAGYEVASLGEVVRAREVGGHA-RIVFGGPGKTDDELQGALERGVELIHAESELQLRR 120 Query: 133 LNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKE---DKFGIPIHQIHSLYAYAS 186 L+ A +G++A + RVNP+ +A + T +FGI + L A Sbjct: 121 LDAIARRMGRRARVLLRVNPNPLSADAAGRRPEGTLTMGGQPTQFGIEEDAVPGLIRLAR 180 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYH 245 TLPGV++ G+ +H S +S + L + R +G + ++VGGG+G+ Y Sbjct: 181 TLPGVEVVGLHLHALSNNLDADSHLALMRHYLSLALRLHREHGLTLDTLNVGGGIGVDYA 240 Query: 246 SDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + C+I+ E GRF+ AD G VT+V+ IK++ K F + Sbjct: 241 QPSHAFDWRRFCDGLGVLLAEARAGCRIVFECGRFIAADCGYYVTEVVDIKRNHGKWFAV 300 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRL-------HIHADIVGPICETGDFIALNRK 356 L + F P + H + N + G +C D +A + Sbjct: 301 LRGGTHHFRLPASWQHNHPFAVLPNAQWSYPFARPSVQAQAITLCGELCTPKDVLARDVV 360 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLI 388 + GD + + GAYG S + S Sbjct: 361 VDRLSVGDRIVFQLAGAYGWHISHHDFLSHPHP 393 >gi|257413466|ref|ZP_05591663.1| diaminopimelate decarboxylase [Roseburia intestinalis L1-82] gi|257203425|gb|EEV01710.1| diaminopimelate decarboxylase [Roseburia intestinalis L1-82] Length = 278 Score = 129 bits (324), Expect = 9e-28, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 101/261 (38%), Gaps = 10/261 (3%) Query: 160 KKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD 219 I + K+G QI + + + A +L Sbjct: 3 NGIMDNPGDAKYGFTHEQIIEGFKILKEKGAKHFGVHAFLASNTVTNEYYPKLARQLFEL 62 Query: 220 LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL-------QCKII 272 + + G +IQ I++ GG+G+ Y D P + + F + I Sbjct: 63 VVELRDKTGCDIQFINLSGGVGVPYTPDQTPNDIRVIGQGVKEAFEEILVPAGLGNISIY 122 Query: 273 LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 E GRF++A G LVTK I K + K ++ +D + MRP +Y AYH I + Sbjct: 123 TEMGRFMLAPYGCLVTKAIHEKHT-YKEYIGVDACAVNLMRPAIYGAYHHITVMGKEDEP 181 Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 H D+ G +CE D A++R + GDLL I GA+G YN +L E++ Sbjct: 182 CDH-KYDVTGSLCENCDKFAIDRMLPKIDMGDLLVIHDAGAHGFSMGYNYNGKLRSAEVL 240 Query: 393 V-NGSQFHIIRPRMTFQELIE 412 + +IR T + Sbjct: 241 LKEDGSTQLIRRAETPDDYFR 261 >gi|225377633|ref|ZP_03754854.1| hypothetical protein ROSEINA2194_03284 [Roseburia inulinivorans DSM 16841] gi|225210497|gb|EEG92851.1| hypothetical protein ROSEINA2194_03284 [Roseburia inulinivorans DSM 16841] Length = 377 Score = 129 bits (324), Expect = 9e-28, Method: Composition-based stats. Identities = 66/391 (16%), Positives = 123/391 (31%), Gaps = 23/391 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TP Y ++KN + A KA S + SG Sbjct: 3 IEELKTPCYVIDEKQLKKNLSILQKVEKDTGCKILLAQKAFSCFYEYPLIGQYISGTTAS 62 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E R + E VF+ K D +L FN S+ E + Sbjct: 63 GLFEARLGKE-EMGKENHVFAPAYKEEDVKELVKICDHMVFNSFSQLEKYK------NFC 115 Query: 142 KKAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 K+ + R+NP+ + H K + G+ I + ++ + Sbjct: 116 KETSVGIRINPECSTQGDHAIYDPCAKGSRLGVTIAHFKEQF-------TDEMYDYVDGL 168 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 ++ K L + ++ S + ++ ++ GGG I I Sbjct: 169 HFHTLCEQNADDLAKTLEAVEEKFGSYLYKMKWLNFGGGHHITRADYDIGL----LEKCI 224 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 I LEPG + + G L T V+ + + +T ++ A + + Sbjct: 225 LHMKEKYDLDIYLEPGEAIALNAGYLATTVMDVVDNDIQTLILDASAACHMP--DVLEMP 282 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + + + + C GD I + D LY E Y V++ Sbjct: 283 YRPPLRSSGMPEEKKYTYRLSSYTCLAGDIIGDYSFDEEKKVDDRLYFEDMAIYSMVKNN 342 Query: 381 TYNSRLLI-PEIMVNGSQFHIIRPRMTFQEL 410 T+N L +M + +IR ++++ Sbjct: 343 TFNGIPLPDIAVMDESGECKVIRS-FSYEDF 372 >gi|299146075|ref|ZP_07039143.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_23] gi|298516566|gb|EFI40447.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_23] Length = 379 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 60/388 (15%), Positives = 120/388 (30%), Gaps = 20/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y + KN + D + A K+ + + S Sbjct: 5 NQFPSPCYIMEEELLRKNLSLIKSVADRAGVEIILAFKSFAMWRSFPIFREYINHSTASS 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R AL + ++ + S + + V+ G Sbjct: 65 VYEARLALEEFGSKAH---TYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGS 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 RVNP+ + + + +FGI + + + Sbjct: 122 GISCGIRVNPEYSEVETELYNPCAPGTRFGITADLLPDV-----------LPQGIEGFHC 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 S ++ + L L + I+ +++GGG + L + Sbjct: 171 HCHCESSSYELERTLEHLEAKFAHWFPQIKWLNLGGGHLMTRKDYDTEHLIRLLQGLKAR 230 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 Y +I+LEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 231 YSHL---RIVLEPGSAFTWQTGVLASEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQP 287 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + +I + G C +GD++ L + G+ + E Y V++ + Sbjct: 288 AVRGAEMGNEGKYI-YRLGGNSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMF 346 Query: 383 NSRLLIPE-IMVNGSQFHIIRPRMTFQE 409 N I + I + ++++ Sbjct: 347 NGIHHPAIAIWTKEGKAE-IYKQFSYED 373 >gi|333030061|ref|ZP_08458122.1| carboxynorspermidine decarboxylase [Bacteroides coprosuis DSM 18011] gi|332740658|gb|EGJ71140.1| carboxynorspermidine decarboxylase [Bacteroides coprosuis DSM 18011] Length = 377 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 116/391 (29%), Gaps = 20/391 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + P Y + + KN D + A K+ + S Sbjct: 5 NQFPNPCYIMDESLLRKNLEKIKGVADTAGIEIILAFKSFALWRTFPIFREYIGHSTASS 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 + E R AL + + ++ S + +L Sbjct: 65 KYEARMALETFGSKAH-----TYSPAYTDEDFHEIMRCSDHITFNSLTQYERFYRKTLEH 119 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 R+NP+ + + + +FG+ + K+ Sbjct: 120 DITCGLRINPEYSEVENDLYNPCAPGSRFGV-----------IQSQMPEKLPEGIEGFHC 168 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + + L + + I+ I+ GGG + +R + Sbjct: 169 HTLCESNSYDFERTLVYIERNFSKWFDQIKWINFGGGHLMTQKDYNREHLIGVLKGFKAR 228 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 Y +I+EPG G+L +KV+ I ++ I++V+ M TL Y Sbjct: 229 YPHLH---VIMEPGSAFTWQTGVLTSKVVDIVENKGIKTAIVNVSFTCHMPDTLEMPYQP 285 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + D +I I G C +GD++ + GD++ E Y V++ + Sbjct: 286 VITDAKIGNDGPYI-YRIGGNSCLSGDWMGNWSFNKELKVGDVVVFEDMIHYTTVKTTMF 344 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 N + ++ T+ + + Sbjct: 345 NGIHHPHIGLWTKDNKALVMKHFTYGDYLNR 375 >gi|239624545|ref|ZP_04667576.1| diaminopimelate decarboxylase [Clostridiales bacterium 1_7_47_FAA] gi|239520931|gb|EEQ60797.1| diaminopimelate decarboxylase [Clostridiales bacterium 1_7_47FAA] Length = 430 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 89/430 (20%), Positives = 151/430 (35%), Gaps = 33/430 (7%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 ++ + + A TP Y + A G D + YA+KAN +T A Sbjct: 2 DIQILRQAAGWGTPAYVFDLDAFALRIRHMKEIL-GQDIKIIYAMKANPFFT--RTAAQE 58 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL--QSGIYCFNVESESELKT 132 GL++ S GE A VP E+IV SGV K I + + Sbjct: 59 ADGLEVCSPGEYAICQRAGVPPEKIVLSGVNKEAAHIREVVGGVGSCGAAVGNPGPAAGS 118 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKIS--TGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + +A + A ++FG+ I S+ + P Sbjct: 119 PGPDTYTAESLSQLALLESCAAQAQGSPLRVLLRLTSGNQFGMDEETILSVIQRRNAYPH 178 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGIAYHSDHR 249 + +G+ + G+Q Q HK + L L ++R H I+ ++ G G I Y Sbjct: 179 LHFTGLQYYSGTQKKQSGKIHKELERLDALLARIRDELQHEIRELEYGPGFHIPYFEGES 238 Query: 250 PPSSS-DYASLIHQYFGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 P A+ I LE GRFL A G VT+V+ K++ + + I+D Sbjct: 239 PVDEDAMLANFRAALDAMAFKGSISLEAGRFLAAPCGSYVTRVVDTKQNQGQDYCIVDGG 298 Query: 308 MNDFMRPTLYDAYHEINY----------IVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 +N A + + + G +C +GD + N + Sbjct: 299 INHVNYYGQAMAMKIPAIRHLPQSISQGMPADHIPGENTQWTVCGSLCTSGDMLVKNLPL 358 Query: 358 ALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQ-FHIIRPR----------- 404 + R GD+L ++ GAY + + SR L + ++R Sbjct: 359 SGLRTGDMLVFDRIGAYAVTEGIYLFLSRGLPAVLTYERETGLKLVRGALPTSPINDGSI 418 Query: 405 MTFQELIELD 414 F++ I+ + Sbjct: 419 QYFEDYIKKE 428 >gi|60682034|ref|YP_212178.1| putative carboxynorspermidine decarboxylase [Bacteroides fragilis NCTC 9343] gi|60493468|emb|CAH08254.1| putative carboxynorspermidine decarboxylase [Bacteroides fragilis NCTC 9343] gi|301163498|emb|CBW23049.1| putative carboxynorspermidine decarboxylase [Bacteroides fragilis 638R] Length = 379 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 119/387 (30%), Gaps = 20/387 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 +P Y + KN + D + A K+ + S Sbjct: 6 QFPSPCYIMEEELLRKNLSLIKSVADDAGVEIILAFKSFAMWRSFPIFREYIGHSTASSV 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A + T + ++ S S+ V+ G Sbjct: 66 YEARLA--LEEFGSKAHTYSPAYTEADFPEIMRC-SSHITFNSLSQFSRFYPLTVAEGSG 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 RVNP+ + + + +FGI + + ++ Sbjct: 123 ISCGIRVNPEYSEVETELYNPCAPGTRFGITADLLPA-----------RLPQGIEGFHCH 171 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S + + L+ L ++ I+ +++GGG + + L +Y Sbjct: 172 CHCESSSFELERTLQHLEEKFSPWFSQIKWLNLGGGHLMTRKDYDTRHLTGLLQGLKKRY 231 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +IILEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 232 PHL---RIILEPGSAFTWQTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPA 288 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + + G C +GD++ + G+ + E Y V++ +N Sbjct: 289 VRGAVMGEEGPFV-YRLGGNSCLSGDYMGSWSFDHELQAGERIVFEDMIHYTMVKTNMFN 347 Query: 384 SRLLIPEIMVN-GSQFHIIRPRMTFQE 409 + + I R ++++ Sbjct: 348 GIHHPAIALWTADGKAEIFRQ-FSYED 373 >gi|115265540|dbj|BAF32802.1| pyridoxal-dependent decarboxylase of pyridoxal binding domain [Pseudomonas syringae pv. actinidiae] Length = 359 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 87/364 (23%), Positives = 138/364 (37%), Gaps = 19/364 (5%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 T I K Y F+ V YA+KAN VI L GS DI S EL + + Sbjct: 2 VIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYELDKVM 59 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 + V ER+ + K +I + G+ F +S E N + G K + Sbjct: 60 SCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDS--EADLRNIAKAAPGSKVYVRILT 117 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 A KFG L A L V G+ H+GSQ I + Sbjct: 118 EGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVGSQQRDISVW 169 Query: 211 HKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFGNL 267 A ++ + ++L+ ++ I++GGG Y + + + + + FG+ Sbjct: 170 DAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDD 229 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 +IILEPGR L+++ GILV++V+ + + + + I + + Sbjct: 230 LPEIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPI 289 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYGAVQSG-TYN 383 I GP C++ D + N K + L GD +Y TGAY S +N Sbjct: 290 WTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFN 349 Query: 384 SRLL 387 Sbjct: 350 GFPP 353 >gi|294634821|ref|ZP_06713345.1| diaminopimelate decarboxylase [Edwardsiella tarda ATCC 23685] gi|291091789|gb|EFE24350.1| diaminopimelate decarboxylase [Edwardsiella tarda ATCC 23685] Length = 122 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 9/121 (7%) Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAG--DRLHIHADIVGPICETGDFIALN-------R 355 D ND MRP +Y ++H I+ + I + GP+CE+GD Sbjct: 2 DAGFNDLMRPAMYGSHHHISLLARDGRALSGPLIETVVGGPLCESGDVFTQREGGTVTAC 61 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 + + GD L TGAYGA S YNSR L+PE++V +IR R +EL L+ Sbjct: 62 ALPAAQVGDWLVFHDTGAYGASMSSNYNSRPLLPEVLVTEQGVTLIRRRQRMEELFALEQ 121 Query: 416 I 416 + Sbjct: 122 L 122 >gi|296283678|ref|ZP_06861676.1| carboxynorspermidine decarboxylase [Citromicrobium bathyomarinum JL354] Length = 390 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 66/391 (16%), Positives = 128/391 (32%), Gaps = 27/391 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V TP + + +N + D + + ALKA S + + G+ Sbjct: 18 RVDTPAFVVDAAKLRENCRILAEIRDEAEIKMLSALKAFSMWSTAPIIGEYLDGVCTSGL 77 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE-SESELKTLNQRAVSLGK 142 E R A E + K + ++A S FN + ++A + G Sbjct: 78 WEARLASE-FYDGEISTYCAAYKPEELEEVARLSDHVIFNSPGQMRRAALILEQAKASGG 136 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + R+NP + + + G P+ Q+ + I Sbjct: 137 AFDVGLRINPQVPTGEVPRYDPSSPGSRLGFPLSQLTEEHMEGV-----------EGIHF 185 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + + + ++ I++GGG I + + Sbjct: 186 HNLCEQGFEPLHRTWDRVFDAIEPYFGQLKWINMGGGHHITRAD----YEREELIEFLRD 241 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG + D GILV ++ ++ + + P + +A + Sbjct: 242 AKDDTGAEIYLEPGEAVALDAGILVGTILDTGENDGP--IAITDISATCHMPDVIEAPYR 299 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP-GDLLYIEKTGAYGAVQSGT 381 + AG+ + GP C GD I + +P G + Y V++ T Sbjct: 300 PAMLHEKAGEP---PVRLGGPSCLAGDVIGEY-SLPVPNEAGQRIAFLDQAHYSMVKTNT 355 Query: 382 YNSRLLIPEIMVNGSQFHII--RPRMTFQEL 410 +N L I + S+ ++ R ++E Sbjct: 356 FNGVPLPS-IWLWDSETDVLECVKRFGYEEF 385 >gi|194215024|ref|XP_001494034.2| PREDICTED: antizyme inhibitor 1 isoform 2 [Equus caballus] Length = 447 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 74/378 (19%), Positives = 125/378 (33%), Gaps = 29/378 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G ++ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQIKP--FYTVKCNSAPAVLEILAALGTGFACSTKSEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A R + G + +D+GGG L + Sbjct: 207 AYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVIS-PLLDIYFPEESG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT---------------FVILDVAMNDFMR 313 KII EPG + V+ L +++ K + ++ + F Sbjct: 266 IKIISEPGSYYVSSAFTLAVNIVAKKVVENDKLCSGVEKTGSDEPAFMYYMNDGVYGFAS 325 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 D D + + GP C+ D I N + GD L + GA Sbjct: 326 KLSEDLNTFPEVHKKYKEDEPLFTSSLWGPSCDELDQIVENCLLPELNVGDWLIFDNMGA 385 Query: 374 YGAVQSGTYNSRLLIPEI 391 + +N Sbjct: 386 DSFHEPSAFNDFQRPAVY 403 >gi|229496138|ref|ZP_04389858.1| carboxynorspermidine decarboxylase [Porphyromonas endodontalis ATCC 35406] gi|229316716|gb|EEN82629.1| carboxynorspermidine decarboxylase [Porphyromonas endodontalis ATCC 35406] Length = 371 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 63/382 (16%), Positives = 118/382 (30%), Gaps = 21/382 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + +N D + A KA + + G G S E R Sbjct: 5 PRYVVEEPLLRRNLSLIRKVADEAKVEIIVAFKAFALWKLFPIFREYGFGSTASSPWEAR 64 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 FS + D + FN S+ + + + Sbjct: 65 LGYEGLERKAHA-FSPAYRAQDWAEWTRCCSHITFNSLSQY------RAFCTPSSEVSYG 117 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NP + + +FG+ ++ G+ + + + Sbjct: 118 LRINPGYSPVETDLYNPALPGSRFGLSPEEL-----------GLHLPEGIEGLHVHVLCE 166 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + + KLL + Q+ S +++GGG + + + A L + Sbjct: 167 GNSFQLEKLLSIIEQRFASPLSEACWLNLGGGHLMTHKEYN---VPHLIAVLKAFRQRHP 223 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 ++I+EPG G L + V+ I + ILDV+ M L Y + Sbjct: 224 HLQLIMEPGSAFAWQTGFLESHVLDIVEHDGIKTAILDVSFTCHMPDCLEMPYKPVIRGA 283 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 + + G C +GDF+ GD L E Y V++ +N Sbjct: 284 HHDPVEGLPTYRLGGNSCLSGDFLGDWSFDKPLEVGDTLIFEDMIHYTTVKTHMFNGVAH 343 Query: 388 IPEIMVNGSQFHIIRPRMTFQE 409 ++ + ++ R +Q+ Sbjct: 344 PDLVLQKSNGEEVLLRRFGYQD 365 >gi|121708875|ref|XP_001272275.1| ornithine decarboxylase, putative [Aspergillus clavatus NRRL 1] gi|119400423|gb|EAW10849.1| ornithine decarboxylase, putative [Aspergillus clavatus NRRL 1] Length = 402 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 72/370 (19%), Positives = 131/370 (35%), Gaps = 39/370 (10%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 +A PF+ + + + + D +A+K N + ++K LA LG+G D Sbjct: 26 IADE---PFFVADLGQVIRQHRRWRVNLP--DVHPFFAVKCNPDPNLLKLLADLGTGFDC 80 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S ELR L+ V RI+F+ K+ + A ++G+ ++ E L+ L Sbjct: 81 ASIEELRTVLSLGVDPSRIIFANPCKSASSLVFAARTGVTRTTFDNLDE---LDSIRTFL 137 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + D +A +KFG + L A L + GV H+ Sbjct: 138 PNAQLVLRIFASDSDA-------LINLGEKFGASVEASLPLLQRARELGLG-VCGVSFHV 189 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 G+ ++ A + + + +S G ++ +D+GGG D Sbjct: 190 GTGASNASAYVNAIQHAKIVFGYGKSLGFDMNFLDIGGGFQDCNLEDIACSLRPML---- 245 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM-------- 312 + ++I EPGR+ L K++S ++ + Sbjct: 246 -KEEFPSGVRLIAEPGRYYARSAYTLACKILSRRRHLGTDDHDKPDMLYQNDGVYGSFMN 304 Query: 313 --------RPTLYDAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIALNRKI-ALPRP 362 RP+L + N + I GP C++ D +A + + + R Sbjct: 305 VLIEKEIVRPSLVAYNWPSHSHSNDTRQKLEEHRYTIWGPTCDSVDCVAKDVPMSSEIRI 364 Query: 363 GDLLYIEKTG 372 GD L + G Sbjct: 365 GDWLKYKNMG 374 >gi|253565787|ref|ZP_04843242.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_2_5] gi|251946066|gb|EES86473.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_2_5] Length = 379 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 119/387 (30%), Gaps = 20/387 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 +P Y + KN + D + A K+ + S Sbjct: 6 QFPSPCYIMEEELLRKNLSLIKSVADDAGVEIILAFKSFAMWRSFPIFREYIGHSTASSA 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A + T + ++ S S+ V+ G Sbjct: 66 YEARLA--LEEFGSKAHTYSPAYTEADFPEIMRC-SSHITFNSLSQFSRFYPLTVAEGSG 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 RVNP+ + + + +FGI + + ++ Sbjct: 123 ISCGIRVNPEYSEVETELYNPCAPGTRFGITADLLPA-----------RLPQGIEGFHCH 171 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S + + L+ L ++ I+ +++GGG + + L +Y Sbjct: 172 CHCESSSFELERTLQHLEEKFSPWFSQIKWLNLGGGHLMTRKDYDTRHLTGLLQGLKKRY 231 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +IILEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 232 PHL---RIILEPGSAFTWQTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPA 288 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + + G C +GD++ + G+ + E Y V++ +N Sbjct: 289 VRGAVMGEEGPFV-YRLGGNSCLSGDYMGAWSFDHELQAGERIVFEDMIHYTMVKTNMFN 347 Query: 384 SRLLIPEIMVN-GSQFHIIRPRMTFQE 409 + + I R ++++ Sbjct: 348 GIHHPAIALWTADGKAEIFRQ-FSYED 373 >gi|295108888|emb|CBL22841.1| carboxynorspermidine decarboxylase [Ruminococcus obeum A2-162] Length = 404 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 64/375 (17%), Positives = 112/375 (29%), Gaps = 13/375 (3%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP Y A+ KN + + A KA SN + +G + Sbjct: 22 QNIKTPCYILDEKALIKNAKLLGEVSERTGCKMLLAQKAFSNYDCYRFFEPYLAGTEASG 81 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R E VF + + +L + FN S+ + + Sbjct: 82 LFEARLGAEEMPGKEVHVFCAGYRADEFEELLQYADHIVFNSPSQLLRFGVRAKEAGKSV 141 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + H + G Q + ++ + + Sbjct: 142 GLRINPECSTQ---EGHDIYDPCASGSRMGTTRAQWDEAFQ-----KNPELLDLLDGLHF 193 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + L + + ++ I+ GGG I I Sbjct: 194 HTLCEQDSDDLETTLVSVKKHFGDLASRMKWINFGGGHHITRPG----YDIERLERCIRM 249 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + LEPG + G L+T V+ + K+ + I+D + M L Y Sbjct: 250 VQEEWKADVYLEPGEAWALNAGFLLTSVLDVLKNGETQIAIVDASAACHMPDVLEMPYLP 309 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + I + GP C +GD I + LP GDLL Y ++ T+ Sbjct: 310 PLLGTD-ETEESGITVRLGGPTCLSGDVIGDYKFRQLPEYGDLLMFGDMAIYTTCKNNTF 368 Query: 383 NSRLLIPEIMVNGSQ 397 N L + +G Sbjct: 369 NGMPLPDIWLRHGDN 383 >gi|83747080|ref|ZP_00944124.1| Ssd [Ralstonia solanacearum UW551] gi|207739670|ref|YP_002258063.1| staphyloferrin b siderophore synthesis decarboxylase protein [Ralstonia solanacearum IPO1609] gi|83726210|gb|EAP73344.1| Ssd [Ralstonia solanacearum UW551] gi|206593052|emb|CAQ59958.1| staphyloferrin b siderophore synthesis decarboxylase protein [Ralstonia solanacearum IPO1609] Length = 413 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 101/393 (25%), Positives = 161/393 (40%), Gaps = 25/393 (6%) Query: 19 EKLAHVV--QTPF----YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 +L P Y Y + + S + YA+KANS+ V+ L Sbjct: 3 RELIERYLQGAPAPVCAYLYDLDHLRERAGRLSAMLP-PGCELFYAIKANSDAPVLAALD 61 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 +G ++ S GE+ RA A RIVF G GKT E+ AL+ G+ +VESE +L+ Sbjct: 62 GAVAGYEVASLGEVVRAREVGAHA-RIVFGGPGKTDAELQGALERGVELIHVESELQLRR 120 Query: 133 LNQRAVSLGKKAPIAFRVNPDI----NANTHKKISTGKKEDK--FGIPIHQIHSLYAYAS 186 L+ A +G++A + RVNP+ +A + + FGI + L A Sbjct: 121 LDAVACRMGRRARVLLRVNPNPLSADSAGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLAR 180 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYH 245 LPGV++ G+ +H S +S + L +LR + ++VGGG+G+ Y Sbjct: 181 GLPGVEVVGLHLHALSNNLDADSHLALIRHYLALALRLRREHGLTLDTLNVGGGIGVDYA 240 Query: 246 SDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + C+I+ E GRF+ AD G VT+V+ IK++ K F + Sbjct: 241 QPSQAFDWRRFCDGLGALLAEAGAGCRIVFECGRFIAADCGYYVTEVVDIKRTHGKWFAV 300 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRL-------HIHADIVGPICETGDFIALNRK 356 L + F P + H + N + G +C D +A + Sbjct: 301 LRGGTHHFRLPASWQHNHPFAIVPNAQWAYPFARPSVQAQAVTLCGELCTPKDVLARDVV 360 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLI 388 + GD + + GAYG S + S Sbjct: 361 VDRLSVGDRIVFQLAGAYGWHISHHDFLSHPHP 393 >gi|224046591|ref|XP_002200322.1| PREDICTED: ornithine decarboxylase antizyme inhibitor [Taeniopygia guttata] Length = 450 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 72/378 (19%), Positives = 123/378 (32%), Gaps = 32/378 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + +N + + N Y +K NS V++ L LG G S+ E+ Sbjct: 40 FYVGDLGKLVRNNVQWQNVMA--PIKPFYPVKCNSTPGVLEILGTLGVGFACSSKAEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + E I+++ K +I A ++GI +++ ELK +++ + IA Sbjct: 98 VQDLGISPENIIYTNPCKQASQIKYAAKAGINIMTCDNDIELKKISRNHPNAKLLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L +I GV H+ ++ Sbjct: 157 ---------TEDITAGEEMNMKFGTTLKNCRHLMECAKELGV-QIVGVKFHVSGSCKDLQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A R + G + +D+GGG + L + Sbjct: 207 TYIHALSDARCVFDMAEEFGFKMNMLDIGGGFTGSELQLEEVNHVIR-PLLDVYFPKESG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSAD------------------KTFVILDVAMND 310 +I EPG + V+ L VI+ K T+ I D Sbjct: 266 INVIAEPGCYYVSSAFTLAVNVIAKKTVEYDKFLPSGVEQTRNDDEPVFTYYINDGVYGS 325 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 F D + + GP C+ D I N + GD L + Sbjct: 326 FASKLSEKLNTIPEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELSVGDWLIFDN 385 Query: 371 TGAYGAVQSGTYNSRLLI 388 G+ + T+N Sbjct: 386 MGSGTLGEQSTFNDYQRP 403 >gi|154253335|ref|YP_001414159.1| Orn/DAP/Arg decarboxylase 2 [Parvibaculum lavamentivorans DS-1] gi|154157285|gb|ABS64502.1| Orn/DAP/Arg decarboxylase 2 [Parvibaculum lavamentivorans DS-1] Length = 382 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 71/360 (19%), Positives = 122/360 (33%), Gaps = 21/360 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P +C ++ +F F G V YA K N + V+K L+ G D S E+ Sbjct: 25 PVFCIFPDILKTRARSFVEGFPG---TVLYATKCNPHPYVLKALSDAGIHHFDTASISEI 81 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + A V A GI + V+ EL + A + Sbjct: 82 AKVTELLPEAHCYFNHPVKGRGALEAAADVYGITDYVVDHPDELDKVISIAGT------- 134 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + ++ T K KFG +L AS +GSQ Sbjct: 135 --DITIEVRIATPKGKVVYDLSAKFGAAPEGAVTLLKEASRRGCRTAIAFH--VGSQCLD 190 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++F A ++ + ++ ++++DVGGG Y S+ P + + Sbjct: 191 PDAFRVAMEMAMRVAEEAGVK---LEYLDVGGGFPAIYKSNVPPLQTYFDTIAAARERLG 247 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ + EPGR LVA+ ++T+V K + +++ L + Sbjct: 248 IEVPLFAEPGRALVAEACSVLTQVHLRKGDDLYINDGIYGCLSEIRDGDLDPPVRALTKD 307 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSR 385 + I GP C++ D + L + R GD + GAY +N Sbjct: 308 GKV--EGELRPFRIFGPTCDSLDVLKLPFYLPENIREGDWVEFGLMGAYSIGMQTGFNGF 365 >gi|326565412|gb|EGE15589.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 103P14B1] gi|326573400|gb|EGE23368.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 101P30B1] Length = 400 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 113/397 (28%), Gaps = 29/397 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP+Y AI N ALK + V +++ G S Sbjct: 17 ATIQTPYYLLDERAIIDNLSITQKVCHESGVKALLALKCFATWGVFESMKPYLHGTTSSS 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+R E +S + ++ FN Sbjct: 77 LKEVRLGKECFG-GETHAYSVAYADHEIKEVLDYCDKIIFNS--------------INQL 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 K + +I T P L + + + Sbjct: 122 KRFGQLAHDKNIPVGLRLNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIH 181 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + L D+ + H ++ I GGG+ H + + + + Sbjct: 182 NNCENTDFEAFSQSLTDIENRFGELFHRLEWISFGGGI----HYIDQNYPLDKFINRLKN 237 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG V +LVT V+ + + V+ + +Y Sbjct: 238 FSETYGVQIYLEPGEASVHQGAVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSP 297 Query: 323 INYIVNPAGD----------RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + Y+ + A D I G C GD + GD + Sbjct: 298 LAYVNDTAYDITGADFDGTSADETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAA 357 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 AY V+ +N + +++ +I+ + +++ Sbjct: 358 AYTMVKKNWFNGVDMPSIVIIRQDGKIMIQRQFDYED 394 >gi|224542281|ref|ZP_03682820.1| hypothetical protein CATMIT_01456 [Catenibacterium mitsuokai DSM 15897] gi|224524823|gb|EEF93928.1| hypothetical protein CATMIT_01456 [Catenibacterium mitsuokai DSM 15897] Length = 373 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 61/390 (15%), Positives = 120/390 (30%), Gaps = 25/390 (6%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + + TP + T + N + + A K S + SG Sbjct: 3 INELPTPCFVIDETKLIHNLEILKEVEERTGAKILLAQKCFSCFEEYPLIGKYISGTTAS 62 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E R + E V+S ++ D +LA FN ++ +LK + Sbjct: 63 GLYEARLGKE-KMGLENHVYSPAYRSQDIEELAEICDHIVFNSKA--QLKRYAEVVKDTS 119 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I + + + + G + + Sbjct: 120 IGIRINPECSTQVGHAIYDPCAPGSRMGIRACDFDDEIAEMVDGLH--------FHTLCE 171 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E+ KA + ++ ++ +++GGG I I+ Sbjct: 172 QNSDDLETTLKAVE------EKFSKWLPQMKWLNMGGGHHITRDD----YDVERLIQCIN 221 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++ LEPG + + G VT+V+ I ++ K ++ A + + + Sbjct: 222 HMQETYDLQVYLEPGEAVALNAGYNVTEVLDIVENNGKILILDTSAACHMP--DVLEMPY 279 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + + L + C GD I + GD LY E Y V++ T Sbjct: 280 RPPLKESGLPNELAYTYRLSCNTCLAGDVIGEYSFDHEIKIGDKLYFEDMAIYSMVKTNT 339 Query: 382 YNSRLLIPE-IMVNGSQFHIIRPRMTFQEL 410 +N L +M + II+ +++ Sbjct: 340 FNGIPLPSIAVMDQNGECRIIKE-FGYEDF 368 >gi|301114639|ref|XP_002999089.1| pyridoxal-dependent decarboxylase, putative [Phytophthora infestans T30-4] gi|262111183|gb|EEY69235.1| pyridoxal-dependent decarboxylase, putative [Phytophthora infestans T30-4] Length = 1199 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 77/415 (18%), Positives = 154/415 (37%), Gaps = 33/415 (7%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 Y AI+ + +F + +A+K+ IK GL+ S E++ AL Sbjct: 784 VYDLDAIDMAFQALLTSFP-VHFEHRFAMKSCPLSFFIKRAIENDVGLECASIVEVKHAL 842 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES--------ESELKTLNQRAVSLGK 142 P RIVF KT ++ A+ +G+ +E + + Sbjct: 843 RLGCPPHRIVFDSPCKTRRDLQFAIIAGVEVNADNFDELDIIREHAEAIFQSSFPECTPR 902 Query: 143 K----APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 I R+NP + A + +S + KFG+P+ + A ++G+ Sbjct: 903 YAGNLPRIGLRINPLLGAGANSCLSVSTVQSKFGVPLTAENRARIIAFFCANPYMTGLHA 962 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GSQ +E + +L +L ++ + I+ +++GGGL + + P+ ++Y Sbjct: 963 HVGSQGCSLEMLSQGAVVLSELANEIDAAAGTSRIKVLNIGGGLSTNFDDEEVSPTFAEY 1022 Query: 257 ASLIH----QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA--DKTFVILDVAMND 310 ++ Q F I+ E G + + G +V++V +K D + ++ Sbjct: 1023 VEVLRREAPQLFKRTGRTILTEFGSSVSSKTGWVVSEVEYVKAHPQVDGDDLTQTAIIHA 1082 Query: 311 --------FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 RP L+ + ++ GP+C GD + ++ Sbjct: 1083 GSDLFLRACYRPELFARRMSVYNPAGLVSMAPVSVQNVAGPLCFGGDMVGRRVELPTISQ 1142 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ----FHIIRPRMTFQELIEL 413 GD + + TGA + SR S+ +++ T ++++ Sbjct: 1143 GDFVVVHDTGANTMSMFSRHCSRPAPAVFGYRASEDEVSLQLLKAAETPEQVMSF 1197 >gi|28871704|ref|NP_794323.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854956|gb|AAO58018.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 359 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 89/364 (24%), Positives = 138/364 (37%), Gaps = 19/364 (5%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 T I K Y FD V YA+KAN VI L GS DI S EL + L Sbjct: 2 VIDTAIISKAYDDLRAGFDF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYELDKVL 59 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 + V ER+ + K +I + G+ F +S E N + G K + Sbjct: 60 SCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDS--EADLRNIAKAAPGAKVYVRILT 117 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 A KFG L A L V G+ H+GSQ I + Sbjct: 118 EGSTTA-------DWPLSRKFGCQTDMAMDLLILARDLGLV-PYGISFHVGSQQRDISVW 169 Query: 211 HKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFGNL 267 A ++ + ++L+ ++ I++GGG Y + + + + + FG+ Sbjct: 170 DAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDD 229 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 +IILEPGR L+++ GILV++V+ + + + + I + + Sbjct: 230 LPEIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPI 289 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLLYIEKTGAYGAVQSG-TYN 383 I GP C++ D + N K + L GD +Y TGAY S +N Sbjct: 290 WTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFN 349 Query: 384 SRLL 387 Sbjct: 350 GFPP 353 >gi|57506771|dbj|BAD86639.1| putative carboxynorspermidine decarboxylase [Selenomonas ruminantium] Length = 391 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 72/371 (19%), Positives = 115/371 (30%), Gaps = 11/371 (2%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 V TP Y A+E N + A K S A + G Sbjct: 5 IDRVPTPAYVVDEQALENNLQILQEVKAAAGCKILLAQKCFSMFAEYPLIGKYLDGATAS 64 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK--TLNQRAVS 139 E R + E VFS + + ++A FN S+ + Sbjct: 65 GLYEARLGHE-EMEGENHVFSPAYRPEEIEEIAGICDHVIFNSFSQLRRFGAKVKAIQQK 123 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 G + I R+NP+ + H + G+ + A L + +D Sbjct: 124 RGVQHGIGLRINPECSTQDHAIYDPCAAGSRLGVTAEDFAKMAAVEPEL----FALLDGL 179 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 + + S A L + R + H GG +D+ D Sbjct: 180 HFHTLCEQNSDALAETLQAVEQKFGRWLEQDSIHWLNMGGGHHITRADYDRQLLIDLVQS 239 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + ++ LEPG + + G LVT+V+ + ++LD + M L Sbjct: 240 VR---EKYGVEVYLEPGEAVALNAGYLVTEVLDTVTNHGTHILLLDASAACHMPDVLEMP 296 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 Y AG++ + + C GD I PGD LY E Y V++ Sbjct: 297 YRPPLKDSGEAGEKA-YNYRLSSCTCLAGDIIGDYSFDREILPGDRLYFEDMAIYSMVKN 355 Query: 380 GTYNSRLLIPE 390 T+N L Sbjct: 356 NTFNGMALPAI 366 >gi|126322169|ref|XP_001369332.1| PREDICTED: similar to Antizyme inhibitor 1 [Monodelphis domestica] Length = 449 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 74/376 (19%), Positives = 123/376 (32%), Gaps = 30/376 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I+ K +I A ++G+ + ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIDISPCKQSSQIKYAAKTGVNIMSCDNEIELKKIARNHPNAKLLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDISGDEESNMKFGTTLKNCRHLLECAKELDV-QIVGVKFHVSSSCKEPQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +D+GGG + L + Sbjct: 207 VYIHALSDARCVFDMAGEFGFKMTILDIGGGFTGSEFQLQEVNHVIS-PLLDVYFPEGSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIK----------------KSADKTFVILDVAMNDFM 312 K+I EPG + V+ L +I+ K + + D F Sbjct: 266 IKVISEPGSYYVSSAFTLAVNIIAKKVVENDVVSSGVGKTGSNEPAFMYYMNDGVYGSFA 325 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + D + + GP C+ D I N + GD L + G Sbjct: 326 SKLSENLNTIPEVHKKYKKDAPLFTSSLWGPSCDELDQIVENCLLPELNVGDWLIFDNMG 385 Query: 373 AYGAVQSGTYNSRLLI 388 A + +N Sbjct: 386 ADTLHEPSAFNDFQRP 401 >gi|71278023|ref|YP_271140.1| putative pyridoxal-dependent decarboxylase [Colwellia psychrerythraea 34H] gi|71143763|gb|AAZ24236.1| putative pyridoxal-dependent decarboxylase [Colwellia psychrerythraea 34H] Length = 415 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 80/384 (20%), Positives = 153/384 (39%), Gaps = 17/384 (4%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 + Y A++ + + +A+KAN +I+TL G D+ S GEL + Sbjct: 28 FVYQLDALKAHLAALQQ---QDVIKLWFAVKANPLSKIIQTLDSEGFNFDVASSGELAQV 84 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF------NVESESELKTLNQRAVSLGKK 143 LA + RI+ +G K+ ++ ++ G+ F + +E ++++ +K Sbjct: 85 LAQGIDPSRILNTGPAKSKKQLTAFIKQGVNTFVVESLNQLNWLNEAVLEQEQSLKSVEK 144 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + RV + + FG+ + + + P + + G+ + Sbjct: 145 PKVLLRVQLQWHEGEKNPLGGNSL-TPFGLSV--SEWQNIHVDSYPALDLCGLHIFQWGN 201 Query: 204 IDQIESFHKAF-KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + E + +++ LT S G ++ +D+GGGLGI Y + + S S + Sbjct: 202 MLSNEKMFSLWSQMITPLTDLASSIGMTLEVLDLGGGLGIDYLGEGQALSWSQVIEDLAI 261 Query: 263 YF-GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++ LE GRF VA+ G V V+ K + ++ ++L +N +RP + D Sbjct: 262 IKAKAGVKELWLELGRFAVAEYGYYVVPVVDRKMNYNQDQLVLAAGINHLLRPAITDQPF 321 Query: 322 EINYIVN--PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + + A D D+ GP+C + D + + G+ L GAYG +S Sbjct: 322 PVQILREGFVAEDDSMQAFDLHGPLCTSMDKLGHLQLPKDTAVGEQLVFGYCGAYGFTES 381 Query: 380 GT-YNSRLLIPEIMVNGSQFHIIR 402 + L E + IR Sbjct: 382 MPFFLCHELAAEYVYQNGTLTQIR 405 >gi|313157700|gb|EFR57111.1| carboxynorspermidine decarboxylase [Alistipes sp. HGB5] Length = 376 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 121/388 (31%), Gaps = 23/388 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + +P Y +++N + ALKA + ++ LA G S Sbjct: 6 KLPSPCYVLDEELLDRNLAIIDRVRRESGAEIIVALKACAMWSIFPELARHSDGATASSA 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R ++ V + ++ S FN ++ E ++L + Sbjct: 66 AEARLVFEEFGRPAHT-YAPVYTDRNIEEILRCSDHITFNSVAQFERF----GPMALLRG 120 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 R+NP + + + G+ + L A L + Sbjct: 121 ISCGLRINPQYSPVETDLYNPCVPGSRLGVTADLLKELPAGIDGLHFHVLCESR------ 174 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 H L + + I+ +++GGG + + A L Sbjct: 175 ------PHHLRLALEAVEKHFGQYLDRIKWLNMGGGHLMTHAEYDCD---ELIALLREFK 225 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + ++ILEPG G LV+ + + ++A V+LDV+ M L Y Sbjct: 226 ARHPHLRLILEPGSAFTWRTGYLVSTIEDLVENAGVHTVMLDVSFACHMPDCLEMPYKPA 285 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + + G C GD+ + G+ + E Y V++ +N Sbjct: 286 IVGAHEPAEGEK-RWRMGGTSCLAGDYYGDWTFDHELKVGERIVFEDMIHYTMVKTTMFN 344 Query: 384 SRLLIP-EIMVNGSQFHIIRPRMTFQEL 410 I + ++R +++ Sbjct: 345 GVAHPAIVIARRDGRIDVVRE-FGYEDF 371 >gi|313205280|ref|YP_004043937.1| carboxynorspermidine decarboxylase [Paludibacter propionicigenes WB4] gi|312444596|gb|ADQ80952.1| carboxynorspermidine decarboxylase [Paludibacter propionicigenes WB4] Length = 376 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 116/388 (29%), Gaps = 22/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y N + + + A KA + + + S Sbjct: 4 QNIPSPCYVLDEATFRNNLALIKSVKERAGVEIILAFKAFAMWSTFPIVREYIPYSTASS 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R A + + ++ S FN + E + ++ Sbjct: 64 LAEARLAYEEMGSKAHT-YGPAYTDREFPEIMRCSSHITFNSLQQFERFYPQTQFENISC 122 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 R+NP+ + + + G+ + L G K+ + Sbjct: 123 ----GLRINPEFSDVETDLYNPCAPGSRLGV-----------VADLLGDKLPEGVEGLHF 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + L + ++ I +++GGG + S Sbjct: 168 HTLCESTSFDMERTLAVVEEKFGKFFPQINWLNMGGGHLMTKEGYDVEHLISLL---QAF 224 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ILEPG G+LV+ V+ I ++ +LDV+ M L Y Sbjct: 225 KAKYPHLQLILEPGSAFAWRTGVLVSSVVDIVENKGIKTAMLDVSFACHMPDCLEMPYKP 284 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 A + G C +GDF + GD + E Y V++ + Sbjct: 285 AIVGATDAIPGKP-TYRMGGNSCLSGDFYGDWSFDHELKIGDRIIFEDMIHYTMVKTTMF 343 Query: 383 NSRLLIPE-IMVNGSQFHIIRPRMTFQE 409 N I G++F ++R +++ Sbjct: 344 NGVSHPSIGIWTKGNEFKLVRE-FGYED 370 >gi|255009479|ref|ZP_05281605.1| putative carboxynorspermidine decarboxylase [Bacteroides fragilis 3_1_12] gi|313147250|ref|ZP_07809443.1| carboxynorspermidine decarboxylase [Bacteroides fragilis 3_1_12] gi|313136017|gb|EFR53377.1| carboxynorspermidine decarboxylase [Bacteroides fragilis 3_1_12] Length = 379 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 58/386 (15%), Positives = 117/386 (30%), Gaps = 18/386 (4%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 +P Y + KN + D + A K+ + S Sbjct: 6 QFPSPCYIMEEELLRKNLSLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIGHSTASSV 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A + T + ++ S ++ V+ G Sbjct: 66 YEARLA--LEEFGSKAHTYSPAYTEADFPEIMRC-SSHITFNSMAQFHRFYPMTVAGGSD 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 R+NP+ + + + +FGI + ++ Sbjct: 123 ISCGIRINPEYSEVETELYNPCAPGTRFGITADLLPE-----------QLPQGIEGFHCH 171 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S + + L+ L ++ I+ +++GGG + L +Y Sbjct: 172 CHCESSSFELERTLQHLEEKFSPWFSQIKWLNLGGGHLMTRKDYDTEHLIGLLQGLKKRY 231 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +IILEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 232 PHL---RIILEPGSAFTWQTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPA 288 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + + G C +GD++ + G+ + E Y V++ +N Sbjct: 289 VRGAVMGEEGPFV-YRLGGNSCLSGDYMGSWSFDHELQIGERIVFEDMIHYTMVKTNMFN 347 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 + S I + ++++ Sbjct: 348 GIHHPAIALWTASGNAEIFKQFSYED 373 >gi|326565772|gb|EGE15934.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis BC1] Length = 400 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 111/397 (27%), Gaps = 29/397 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP+Y AI N ALK + V +++ G S Sbjct: 17 ATIQTPYYLLDERAIIDNLSITQKVCHESGVKALLALKCFATWGVFESMKPYLHGTTSSS 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+R E +S + ++ FN Sbjct: 77 LKEVRLGKE-YFGGETHAYSVAYADHEIKEVLDYCDKIIFNS--------------INQL 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 K + +I T P L + + + Sbjct: 122 KRFGQLAHDKNIPVGLRLNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIH 181 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + L D+ + H ++ I GGG+ H + + + + Sbjct: 182 NNCENTDFEAFSQSLTDIENRFGELFHRLEWISFGGGI----HYIDQNYPLDKFINRLKN 237 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG V +LVT V+ + + V+ + +Y Sbjct: 238 FSETYGVQIYLEPGEASVHQGAVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSP 297 Query: 323 INYIVNPAGD----------RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + Y+ D I G C GD + GD + Sbjct: 298 LAYVNETTYDITGADFDGTSADETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAA 357 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 AY V+ +N + +++ +I+ + +++ Sbjct: 358 AYTMVKKNWFNGVDMPSIVIIRQDGEIMIQRQFDYED 394 >gi|317055732|ref|YP_004104199.1| Orn/DAP/Arg decarboxylase 2 [Ruminococcus albus 7] gi|315448001|gb|ADU21565.1| Orn/DAP/Arg decarboxylase 2 [Ruminococcus albus 7] Length = 392 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 89/379 (23%), Positives = 154/379 (40%), Gaps = 23/379 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L+ A + TP Y + T K NAF G +CY++KAN ++ L S Sbjct: 6 LKNAALTLGTPCYIFDTDVFAKRAAAVKNAF-GDRVGLCYSIKANP--FLLAALPEEFSY 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +++ S GEL P ++I+FSGV KT ++I A G+ F ES + +N+ A Sbjct: 63 IEVCSPGELSICENVGAPLDKIIFSGVNKTGEDIARAYADGVAIFTAESRLHAELINECA 122 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 V G + + R+ +FG+ + + GV+I G+ Sbjct: 123 VKNGGRVKLILRLAHGS---------------QFGMDKSDLLDIIDRREQFAGVEIIGLH 167 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 G+Q ++++ K LL +L +L + + HI+ G GL + Y+ D + Sbjct: 168 YFTGTQKTKVKTIEKELALLDELCAELENEHGYKPSHIEYGTGLAVEYYKDFTESTDIAL 227 Query: 257 ASLI--HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + +E GRF A+ G +TK++ IK + D +VI D +N Sbjct: 228 LEEASAVIRPFAEKYPLTVEMGRFFAAECGSYLTKIMDIKTTNDLKYVICDGGINHVNYY 287 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + ++ I + G +C T D + + GD++ K GAY Sbjct: 288 GQ-NMAMKVPPIEVIEKTGEEKDYCLCGSLCTTADILVRKATLPTLERGDIIAFSKCGAY 346 Query: 375 GAVQS-GTYNSRLLIPEIM 392 + + SR + + Sbjct: 347 SVAEGIAAFLSRDMPAVAL 365 >gi|120603558|ref|YP_967958.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris DP4] gi|120563787|gb|ABM29531.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris DP4] Length = 390 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 56/395 (14%), Positives = 112/395 (28%), Gaps = 28/395 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL----GSGL 78 +P + + N V ALK + + L+ G Sbjct: 13 ARFPSPCFVIDEDRLVANAAILDEVQRRTGARVLLALKGFAAWSTFPLLSRAQGGVLHGT 72 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 S E R E F+ D +L + FN + + + Sbjct: 73 CASSPHEARLGRE-TFGGEVHAFAAGYSEDDMAELVTIADHIVFNSFA--QWRRYRPVVE 129 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + G+ RVNP+ + + + G+ + Sbjct: 130 ASGRHIECGIRVNPEHSEGAVAIYNPCSPGSRLGVRERHFEAESLEGI-----------T 178 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + + + L + ++ ++ GGG I Sbjct: 179 GLHFHTLCEQDAGALERTLDAFESKFGRYLEGMRWVNFGGGHHITREGYDLDL----LCR 234 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 I + ++ +EPG + D G+L+ V+ + ++ ++ A + + Sbjct: 235 CIERIRDRYGVQVYIEPGEAVALDAGVLLCSVLDVVQADVPVVILDTSAAAHMP--DVLE 292 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + I + D + G C GD + RPGD L Y V+ Sbjct: 293 MPYRPGCIGSGLPDEKAWTCRLAGKSCLAGDVVGDYSFDRPLRPGDRLAFLDMAIYSMVK 352 Query: 379 SGTYNSRLLIPEIMVN--GSQFHIIRPR--MTFQE 409 + T+N L + + ++R TF++ Sbjct: 353 TTTFNGLQLPAIALYRASSGKREVVRTFGYETFRD 387 >gi|154506605|ref|ZP_02043062.1| hypothetical protein RUMGNA_03872 [Ruminococcus gnavus ATCC 29149] gi|153793358|gb|EDN75780.1| hypothetical protein RUMGNA_03872 [Ruminococcus gnavus ATCC 29149] Length = 372 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 54/388 (13%), Positives = 108/388 (27%), Gaps = 23/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP Y + ++KN + A KA S + + G Sbjct: 4 EELRTPCYVIMESEMKKNLQILQEIRQQSGCKILLAQKAFSMYSCYPLIGEYLDGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + E +FS + + ++ FN S+ E Sbjct: 64 LYEAKLGKECMGK-ENHIFSPAYREDEFEEVLESCEHLVFNSFSQLECFGERAAKAGKSV 122 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + H + GI + + + + Sbjct: 123 GIRVNPECSTQ---GEHAIYDPCAPGSRLGILVSEFPET-----------LPSYVEGLHF 168 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ L+ + ++ ++ ++ GGG I R S + + Sbjct: 169 HTLCEQNADALEITLKAVEEKFGKWMKQLKWVNFGGGHHITRADYDREL----LISCVRR 224 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ LEPG + + G L+T V I + + P + + + Sbjct: 225 IQDTYNVQVYLEPGEAVALNAGHLITTVEDIVH----NDIAVLDVSAACHMPDVIEMPYR 280 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + GP C GD I + GD L Y V++ T+ Sbjct: 281 PPLFDSGEAKEKEYTYLLGGPTCLAGDVIGSYSFDQPLKVGDRLTFGDMAIYTTVKNNTF 340 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 N L + S I +++ Sbjct: 341 NGMRLPDIVWERESGECEIVKSFGYEDF 368 >gi|159114038|ref|XP_001707244.1| Ornithine decarboxylase [Giardia lamblia ATCC 50803] gi|157435348|gb|EDO79570.1| Ornithine decarboxylase [Giardia lamblia ATCC 50803] Length = 448 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 77/412 (18%), Positives = 149/412 (36%), Gaps = 60/412 (14%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 + + IE++Y + V YA+K N + ++++L LG+G D S E+R AL Sbjct: 41 VLNVSEIERHYNIWKTHLPE--VQVRYAVKCNMHPLLLRSLHLLGAGFDCASPAEVRAAL 98 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 +A P +I+++ K I+ A + F +SE EL ++ + + + Sbjct: 99 SAGCPPSKIIYANPQKPKRSIEEAFRLNCNTFTFDSEHELLSMLESTPPGKVGRFVLRLL 158 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 PD +++ + KFG + + L L + G H+GS ++SF Sbjct: 159 PPDESSS------ICRFGVKFGASPSECYRLIRLCKHLG-ANLVGFSFHVGSGCGSVDSF 211 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY------- 263 A + + + + + G + +++GGG H + + Sbjct: 212 RLAVQYMGEAAKFAKEQGFTLTVLNIGGGYMSKGAERHYDEPNRHAHITPPSFEEIASAL 271 Query: 264 ------------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD------------- 298 + +I+ EPGRF D+ L T++ + D Sbjct: 272 REEINRIKVYFTNKSEDLEIMAEPGRFFAGDIMTLGTRIYGRRIIFDKIEDNSCLTEKEI 331 Query: 299 ---------KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI----------HAD 339 + + + + L+D + G+R + + Sbjct: 332 MESGKASINEVKYYVGDGVYGYYNAILFDHVVPHLRFTDKHGNRKELSGAHAGSSLNTSS 391 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 I GP C++ D I RK+ L GD + + GAY + +N + + Sbjct: 392 IFGPTCDSLDCILKERKLPLLDVGDWVITDAFGAYTYAAATEFNGIPHVSVV 443 >gi|167850070|ref|ZP_02475578.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia pseudomallei B7210] Length = 409 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 27 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 86 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 87 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 146 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 147 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 198 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 199 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 253 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 254 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 313 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 314 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 369 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 370 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 399 >gi|167821815|ref|ZP_02453495.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia pseudomallei 91] Length = 417 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 35 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 94 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 95 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 154 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 155 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 206 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 207 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 261 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 262 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 321 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 322 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 377 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 378 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 407 >gi|157865853|ref|XP_001681633.1| ornithine decarboxylase [Leishmania major strain Friedlin] gi|68124931|emb|CAJ02515.1| putative ornithine decarboxylase [Leishmania major strain Friedlin] Length = 707 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 75/430 (17%), Positives = 138/430 (32%), Gaps = 85/430 (19%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + + + +A+K+N AV++ L+ LG+G D S+ E+ Sbjct: 258 PFYIIDLGRVVEQMARWRHELPM--VRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315 Query: 88 RA--LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + I+F+ K + ++ A G+ V++ E++ + + S Sbjct: 316 MVLGRHLVASPDDIIFANPCKQLGDLCEAQACGVTYVTVDNPLEMEKIGRLMPSAHVIIR 375 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I T+ + KFG P+ + L A L + GV H+GS D Sbjct: 376 I----------KTNDSKAQCCFSTKFGAPLEDVDGLLKVARQLNVA-VCGVSFHVGSGND 424 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY-----HSDHRPPSSSDYASLI 260 ++ A + + QQ G +D+GGG + + ++ Sbjct: 425 DQSAYLSAVRDAYHVFQQAAQYGFKCTLLDIGGGFPGTEVVQGSGNTSFEIIARTIRPVL 484 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVIS--------------------IKKSADKT 300 + FG II EPGR+ A L+ V + ++ Sbjct: 485 AELFGGGDVTIISEPGRYFTAASHALLMNVFASRTLRLSDVEVSRQAFQSVVSMDEPEEY 544 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA---------------------- 338 ++ + LYD H ++N + + Sbjct: 545 QYYVNDGLYHSFNCILYDHAHPTLLLLNDGDGADGVKSGTAAAAVCSEEEGGMSLSGPLV 604 Query: 339 -----------------------DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 I GP C++ D I + + GD L + G+Y Sbjct: 605 NDPLFVSAWDRRRSFARRPLRMTTIFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYT 664 Query: 376 AVQSGTYNSR 385 +G +N Sbjct: 665 TAAAGFFNGF 674 >gi|167828611|ref|ZP_02460082.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 9] Length = 413 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 31 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 90 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 91 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 150 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 151 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 202 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 203 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 257 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 258 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 317 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 318 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 373 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 374 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 403 >gi|326570423|gb|EGE20463.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis BC8] Length = 400 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 111/397 (27%), Gaps = 29/397 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP+Y AI N ALK + V +++ G S Sbjct: 17 ATIQTPYYLLDERAIIDNLSVTQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSS 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+R E +S + ++ FN Sbjct: 77 LKEMRLGKECFG-GETHAYSVAYADHEIKEVLGYCDKIIFNS--------------INQL 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 K + +I T P L + + + Sbjct: 122 KRFGQLAHDKNIPVGLRLNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIH 181 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + L D+ + H ++ I GGG+ H + + + + Sbjct: 182 NNCENTDFEAFSQSLTDIENRFGELFHRLEWISFGGGI----HYIDQNYPLDKFINRLKN 237 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG V +LVT V+ + + V+ + +Y Sbjct: 238 FSETYGVQIYLEPGEASVHQGAVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSP 297 Query: 323 INYIVNPAGD----------RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + Y+ D I G C GD + GD + Sbjct: 298 LAYVNETTYDITGADFDGTSTDETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAA 357 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 AY V+ +N + +++ +I+ + +++ Sbjct: 358 AYTMVKKNWFNGVDMPSIVIIRQDGEIMIQRQFDYED 394 >gi|294816530|ref|ZP_06775173.1| Putative diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|326444863|ref|ZP_08219597.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294329129|gb|EFG10772.1| Putative diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 430 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 83/376 (22%), Positives = 135/376 (35%), Gaps = 17/376 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y A+ ++ A + YA KAN ++ LA G ++ S GEL Sbjct: 20 PAYLYDLGALREHAAAVRAALPE-RVELYYAAKANPETEILTALAPYVDGYEVASGGELA 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A P + F G GKT +EI AL SG+ F+VES EL L A +A + Sbjct: 79 HVARAV-PGRPLAFGGPGKTPEEIRAALASGVGRFHVESAHELAVLADLAARARVRARVL 137 Query: 148 FRVNPDINANTHKKISTGKKED--KFGIPIHQIHSLYAYAST--LPGVKISGVDMHIGSQ 203 R N + + FGI ++ + P +++ G+ H+ S Sbjct: 138 LRFNLAVPGELLDGSALAMGGRPAPFGIDPADADAVVRTLTEGSSPWLELFGIHAHLASG 197 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 +D A + R +G ++ ++VGGG+ + Y + Y + Sbjct: 198 LDARRQLAVAASVTRWAAALTARHGVPLREVNVGGGMAVDYARPGERFDWAAYGRGLAAL 257 Query: 264 FGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ +EPGR L G T V+ +K+S + F ++ + P Sbjct: 258 ADEHPDTVLRIEPGRALTVYCGWYATDVLDVKRSRGEDFAVVRGGTHHLRTPATKGHDQP 317 Query: 323 INYIVNPAGDRL--------HIHADIVGPICETGDFIALNRKI-ALPRPGDLLYIEKTGA 373 + +VG +C D +A + A R GD + GA Sbjct: 318 CAVLPADDWPHPWPRPATGGPGPVTLVGQLCTPKDLLARAVPLTAPLRAGDRVLFALAGA 377 Query: 374 YGAVQSGT-YNSRLLI 388 Y S + Sbjct: 378 YAWNISHHDFLMHPRP 393 >gi|326560115|gb|EGE10505.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 46P47B1] gi|326577169|gb|EGE27063.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis O35E] Length = 400 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 111/397 (27%), Gaps = 29/397 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP+Y AI N ALK + V +++ G S Sbjct: 17 ATIQTPYYLLDERAIIDNLSITQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSS 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+R E +S + ++ FN Sbjct: 77 LKEVRLGKECFG-GETHAYSVAYADHEIKEVLGYCDKIIFNS--------------INQL 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 K + +I T P L + + + Sbjct: 122 KRFGQLAHDKNIPVGLRLNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIH 181 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + L D+ + H ++ I GGG+ H + + + + Sbjct: 182 NNCENTDFEAFSQSLTDIENRFGELFHRLEWISFGGGI----HYIDQNYPLDKFINRLKN 237 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG V +LVT V+ + + V+ + +Y Sbjct: 238 FSETYGVQIYLEPGEASVHQGAVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSP 297 Query: 323 INYIVNPAGD----------RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + Y+ D I G C GD + GD + Sbjct: 298 LAYVNETTYDITGADFDGTSADETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAA 357 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 AY V+ +N + +++ +I+ + +++ Sbjct: 358 AYTMVKKNWFNGVDMPSIVIIRQDGEIMIQRQFDYED 394 >gi|190360585|ref|NP_001121960.1| antizyme inhibitor 1 [Sus scrofa] gi|187372906|gb|ACD03180.1| antizyme inhibitor 1 [Sus scrofa] Length = 446 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 77/378 (20%), Positives = 124/378 (32%), Gaps = 29/378 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQIKP--FYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +D+GGG L + Sbjct: 207 VYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTQFQLEEVNHVIS-PLLDVYFPEGSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSAD---------------KTFVILDVAMNDFMR 313 KII EPG + V+ L +I+ K + + + D F Sbjct: 266 IKIISEPGSYYVSSAFTLAVNIIAKKVVENKFSSGVGKTGSDEPAFMYYLNDGVYGSFAS 325 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 D D + + GP C+ D I N + GD L + GA Sbjct: 326 KLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIMENCLLPELNVGDWLIFDNMGA 385 Query: 374 YGAVQSGTYNSRLLIPEI 391 + +N Sbjct: 386 DSLHEPSAFNDFQRPAIY 403 >gi|15858865|gb|AAL08050.1| ornithine decarboxylase-like protein variant 2 [Homo sapiens] gi|56202452|emb|CAI19355.1| arginine decarboxylase [Homo sapiens] gi|119627884|gb|EAX07479.1| arginine decarboxylase, isoform CRA_k [Homo sapiens] Length = 480 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 74/391 (18%), Positives = 130/391 (33%), Gaps = 50/391 (12%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 +PA +I+ + K I +I A + GI + ++E EL + + S IA Sbjct: 99 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG+ + L A V++ GV HIGS + Sbjct: 158 ---------TDDSHSLSCLSLKFGVSLKSCRHLLENAKKH-HVEVVGVSFHIGSGCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK-------------------------------- 294 I E GR+ V + +I+ K Sbjct: 268 CGVDIFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREAPLPPPHIATCAASEPSPPAEE 327 Query: 295 ---KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 S + + + F + P+ ++ + + GP + D + Sbjct: 328 NGSTSKTIVYHLDEGVYGIFNSVLFDNICPTPILQKKPSTEQPLYSSSLWGPAVDGCDCV 387 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 A + GD L + GAY + Sbjct: 388 AEGLWLPQLHVGDWLVFDNMGAYTVGMGSPF 418 >gi|296490168|gb|DAA32281.1| arginine decarboxylase [Bos taurus] Length = 412 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 73/364 (20%), Positives = 132/364 (36%), Gaps = 30/364 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ A+ + + F + + YA+K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAVVRKHFCFLKCLPRVRS--FYAVKCNSSPGVLKVLAELGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPA +I+++ K I I A + G+ + ++E EL + + S +A Sbjct: 99 VQHIGVPASKIIYANPCKQIAHIKYAAKHGVRLLSFDNEMELAKVVKSHPSAKMVLCVA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A V++ GV HIGS + Sbjct: 158 ---------TEDSHSLSRLSLKFGASLKSCRHLLENA-KRDHVEVVGVSFHIGSDCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADARVVFEMGAELGHRMHILDLGGGFPGVEDAKVRFEEIASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK---------------SADKTFVILDVAMNDF 311 I+ + GR+ V L +I+ K+ + + + F Sbjct: 268 CGVDILAKLGRYYVTSAFTLAVSIIAKKEVLLDQPGREEETSSSPKSVVYHLGEGVYGVF 327 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A P+ ++ + + GP+ D +A + GD L E Sbjct: 328 NSVLFDSACPAPILQKKPSTEQPLYSSSLWGPVASGCDCVAEGLWLPQLHVGDWLVFENM 387 Query: 372 GAYG 375 GAY Sbjct: 388 GAYT 391 >gi|84370045|ref|NP_001033599.1| arginine decarboxylase [Bos taurus] gi|83638748|gb|AAI09525.1| Arginine decarboxylase [Bos taurus] Length = 502 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 73/364 (20%), Positives = 132/364 (36%), Gaps = 30/364 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ A+ + + F + + YA+K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAVVRKHFCFLKCLPRVRS--FYAVKCNSSPGVLKVLAELGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPA +I+++ K I I A + G+ + ++E EL + + S +A Sbjct: 99 VQHIGVPASKIIYANPCKQIAHIKYAAKHGVRLLSFDNEMELAKVVKSHPSAKMVLCVA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A V++ GV HIGS + Sbjct: 158 ---------TEDSHSLSRLSLKFGASLKSCRHLLENA-KRDHVEVVGVSFHIGSDCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADARVVFEMGAELGHRMHILDLGGGFPGVEDAKVRFEEIASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK---------------SADKTFVILDVAMNDF 311 I+ + GR+ V L +I+ K+ + + + F Sbjct: 268 CGVDILAKLGRYYVTSAFTLAVSIIAKKEVLLDQPGREEETSSSPKSVVYHLGEGVYGVF 327 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 A P+ ++ + + GP+ D +A + GD L E Sbjct: 328 NSVLFDSACPAPILQKKPSTEQPLYSSSLWGPVASGCDCVAEGLWLPQLHVGDWLVFENM 387 Query: 372 GAYG 375 GAY Sbjct: 388 GAYT 391 >gi|57095270|ref|XP_532293.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 1 [Canis familiaris] gi|73974224|ref|XP_849306.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 2 [Canis familiaris] gi|73974226|ref|XP_858461.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 4 [Canis familiaris] Length = 447 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 72/378 (19%), Positives = 119/378 (31%), Gaps = 28/378 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQIKP--FYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKIGVNTMTCDNEVELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQY 263 + A R + G + +D+GGG + P Y Sbjct: 207 VYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGI 266 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMR 313 + F +A I V + K + + + D F Sbjct: 267 KIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGIYGSFAS 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 D D + + GP C+ D I + + GD L + GA Sbjct: 327 KLSEDLNTIPEVHKKYKKDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGA 386 Query: 374 YGAVQSGTYNSRLLIPEI 391 + +N Sbjct: 387 DSLHEPSAFNDFQRPAIY 404 >gi|325923438|ref|ZP_08185098.1| diaminopimelate decarboxylase [Xanthomonas gardneri ATCC 19865] gi|325546083|gb|EGD17277.1| diaminopimelate decarboxylase [Xanthomonas gardneri ATCC 19865] Length = 431 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 78/355 (21%), Positives = 133/355 (37%), Gaps = 6/355 (1%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 + A + + YA KAN+ +++TLA G + S GEL A ++F G Sbjct: 41 WMRAQLPAECELFYAAKANAEPPILRTLAPHMDGFEAASGGELAWLHQQQPQAA-LLFGG 99 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 GK E+ A +VES EL+ L A G+ P+ R+N + ++ Sbjct: 100 PGKLDSELAQAAALPDCTVHVESLGELERLATIAAQAGRCVPVFLRMNIAVPGAQSTRLM 159 Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 G + FG+ + + P +++ G H+ S + QQ Sbjct: 160 MGGQPSPFGLDPDDLDAAIHRLRASPSLRLEGFHFHLMSHQRDAGAQLHLIAAYLRTVQQ 219 Query: 224 LRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC--KIILEPGRFLV 280 R ++ GGG G+ Y + + + + + G ++ LEPGR++ Sbjct: 220 WRQRYGLGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGDALRLRLEPGRYVS 279 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR-LHIHAD 339 A G + +V+ +K+S F I + F P H + Sbjct: 280 ASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQGHDHPFRVLRGARAPVLRDTPVT 339 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 +VG +C D +A N+ +A PGD L GAY S + + + Sbjct: 340 LVGQLCTPKDVLARNQPVAALAPGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFL 394 >gi|114331720|ref|YP_747942.1| diaminopimelate decarboxylase [Nitrosomonas eutropha C91] gi|114308734|gb|ABI59977.1| Diaminopimelate decarboxylase [Nitrosomonas eutropha C91] Length = 400 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 77/358 (21%), Positives = 132/358 (36%), Gaps = 15/358 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y Y A+ + ++ YA+KANS+ ++ LA G + S GE++ Sbjct: 24 AYLYDLGALASHARNIKSSLPD-RVNFFYAIKANSDLPILSALAEHVDGFEASSGGEIQW 82 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + + +D ++ES EL+ L A + A I Sbjct: 83 VRQNF--PDVPLIFSGPGKLDTELELAILNNVTVHIESRFELERLLHIARHYQQPAEILL 140 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDMHIGSQIDQI 207 RVNP + G K +FGI + + + G H+ S Sbjct: 141 RVNPHFEDLRATSLMMGGKPTQFGISVEHLSDCLKMVRDNSDCLYFQGFHFHLLSHQLDA 200 Query: 208 ESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG- 265 + + + + + I HI+VGGG+G+ Y + ++ ++ Sbjct: 201 AQHLRLLSAYIEQAVKWKEEFNLVIDHINVGGGIGVNYKDIDQQFDWCHFSHGLNNLLIG 260 Query: 266 --NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 KI E GR++ A G+ V +VI IK S + T+V++ + F P + H Sbjct: 261 AAKNIPKIRFEMGRYVSAFCGVYVAEVIDIKTSGNGTYVVVKGGTHHFRTPYAQNHSHPF 320 Query: 324 NYIVNPAGDRL-------HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 I + H +IVG +C D +A + + R GD++ GAY Sbjct: 321 KVIPVSTWKKPYSRPGLRHGKVNIVGQLCTPKDLLAFDEMVGEIRVGDIVLFSHAGAY 378 >gi|21232485|ref|NP_638402.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767431|ref|YP_242193.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris str. 8004] gi|188990536|ref|YP_001902546.1| Putative diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris str. B100] gi|21114272|gb|AAM42326.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572763|gb|AAY48173.1| diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris str. 8004] gi|167732296|emb|CAP50488.1| Putative diaminopimelate decarboxylase [Xanthomonas campestris pv. campestris] Length = 427 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 77/359 (21%), Positives = 134/359 (37%), Gaps = 10/359 (2%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 + A + YA KAN+ +++TLA G + S GEL A ++F G Sbjct: 41 WMRAQLPPGCTLFYAAKANAEPQILQTLAPYVDGFEAASGGELAWLHQQQPDAA-LLFGG 99 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLN----QRAVSLGKKAPIAFRVNPDINANTH 159 GK E+ A++ +VES EL+ L Q A ++ P+ R+N + Sbjct: 100 PGKLESELAQAVRLPDCTVHVESLGELQRLAAIARQIAQPDRRRIPVFLRMNIAVPGAQT 159 Query: 160 KKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD 219 ++ G + FG+ + + P +++ G H+ S + Sbjct: 160 TRLMMGGQPSPFGLDPDDLDAALLQLRASPALELRGFHFHLMSHQRDAAAQLHLIAAYLR 219 Query: 220 LTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYAS--LIHQYFGNLQCKIILEPG 276 Q R ++ GGG G+ Y + + + + + ++ LEPG Sbjct: 220 TVQHWRQRHGLGPLLVNAGGGFGVDYLTPEASFDWAGFCAGLPAVLHAHGDGLQLRLEPG 279 Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR-LH 335 R++ A G + +V+ IK+S F I + F P H + Sbjct: 280 RYVSASCGWYLMEVLDIKRSHGAWFAIARGGTHHFRTPAAQGHDHPCVVVRGTHAPVLRD 339 Query: 336 IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 +VG +C D +A N+++A PGD L GAY S + + + Sbjct: 340 TPVTLVGQLCTPKDVLARNQRVAALAPGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFL 398 >gi|46202329|ref|ZP_00053400.2| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 376 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 88/361 (24%), Positives = 137/361 (37%), Gaps = 20/361 (5%) Query: 40 NYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERI 99 NY + V YA+KAN +++ L GS D+ S GE+ L+ PAERI Sbjct: 29 NYHSLRRWLPL--AEVYYAVKANPAPEIVRMLTEEGSRFDVASRGEIDLCLSNGTPAERI 86 Query: 100 VFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTH 159 F K +I A G+ + +SE+EL+ L A I + Sbjct: 87 SFGNTIKKQSDIAYAYAKGVRLYAFDSEAELEKLALAAPGSRVFCRILMTCDGA------ 140 Query: 160 KKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD 219 KFG I L A L + GV H+GSQ ++ + A Sbjct: 141 ----EWPLSRKFGCEIDMAKDLLVKARDLG-LDPYGVSFHVGSQQTDLKQWDIAVGKAAM 195 Query: 220 LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGR 277 L L + G +++ +++GGG Y + A + +FGN +I+EPGR Sbjct: 196 LFSALDAAGIDLRMVNLGGGFPARYRKEVDGIERYAEAVMDAMTKHFGNNIPAMIIEPGR 255 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL-HI 336 LV D GIL T+V+ I + + I Y + D Sbjct: 256 SLVGDAGILETEVVLISRKGYEDDTRWVYLDVGKFGGLAETMDEAIKYRIVTGRDGEDTA 315 Query: 337 HADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIM 392 + GP C++ D + ++ + + GD + I TGAY S +N + Sbjct: 316 PVILAGPTCDSADILYEKAGYEMPVSLKVGDKVRILSTGAYTTSYSAVNFNGFEPLKAYF 375 Query: 393 V 393 + Sbjct: 376 I 376 >gi|326564169|gb|EGE14405.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 12P80B1] Length = 400 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 111/397 (27%), Gaps = 29/397 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP+Y AI N ALK + V +++ G S Sbjct: 17 ATIQTPYYLLDERAIIDNLSVTQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSS 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+R E +S + ++ FN Sbjct: 77 LKEVRLGKECFG-GETHAYSVAYADHEIKEVLGYCDKIIFNS--------------INQL 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 K + +I T P L + + + Sbjct: 122 KRFGQLAHDKNIPVGLRLNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIH 181 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + L D+ + H ++ I GGG+ H + + + + Sbjct: 182 NNCENTDFEAFSQSLTDIENRFGELFHRLEWISFGGGI----HYIDQNYPLDKFINRLKN 237 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG V +LVT V+ + + V+ + +Y Sbjct: 238 FSETYGVQIYLEPGEASVHQGAVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSP 297 Query: 323 INYIVNPAGD----------RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + Y+ D I G C GD + GD + Sbjct: 298 LAYVNETTYDITGADFDGTSADETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAA 357 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 AY V+ +N + +++ +I+ + +++ Sbjct: 358 AYTMVKKNWFNGVDMPSIVIIRQDGEIMIQRQFDYED 394 >gi|323692273|ref|ZP_08106514.1| carboxynorspermidine decarboxylase [Clostridium symbiosum WAL-14673] gi|323503688|gb|EGB19509.1| carboxynorspermidine decarboxylase [Clostridium symbiosum WAL-14673] Length = 383 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 71/408 (17%), Positives = 130/408 (31%), Gaps = 31/408 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 +Y++G L +TP+Y T +++N + A KA S Sbjct: 1 MEYWDGLL--------------KTPYYLVDETLLKQNLEILREVSGRAGCKILLAQKAFS 46 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 +V L +G E R E VFS + + ++ + FN Sbjct: 47 MFSVYPLLREYLAGSAASGLFEARLGHE-EFGGETHVFSAAYREDEFDEILRYADHVVFN 105 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 S ++K +R + GK A + + G + S Sbjct: 106 SPS--QVKKYGERVKAAGKSAGLRLNPECSTQEGH-AIYDPCSPGSRLGTTKRNLESAGK 162 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + + L + Q L L ++ + ++ +++GGG Sbjct: 163 FETELLPYLDGFHFHTLCEQNSDA-----LETTLAALEEKFGNYLPRLKWLNLGGG---- 213 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 +H LI + +I LEPG +V + G LV+ V+ + Sbjct: 214 HHITREDYDRERLIRLILKLREKYGLEIYLEPGEAVVLNAGFLVSTVL-ETMENGIEIAV 272 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 LD + M L Y G++ H + GP C GD I G Sbjct: 273 LDTSAACHMPDVLEMPYRPPVLGGGEPGEKPH-TYRLGGPTCLAGDVIGDYSFDTPLTEG 331 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 + Y V++ T+N L ++ + +F ++ +++ Sbjct: 332 KKVIFSDMALYTMVKNNTFNGMPLPSLVLRDLQGRFRPVKE-FGYEDF 378 >gi|160941972|ref|ZP_02089294.1| hypothetical protein CLOBOL_06863 [Clostridium bolteae ATCC BAA-613] gi|158435113|gb|EDP12880.1| hypothetical protein CLOBOL_06863 [Clostridium bolteae ATCC BAA-613] Length = 410 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 82/392 (20%), Positives = 135/392 (34%), Gaps = 29/392 (7%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 +N L++ A TP Y + G + YA+KAN A Sbjct: 1 MDNHILQEAARTYNTPCYIFDLDVFISRIRRMEQIL-GKQVNIYYAMKANPFLT--AAAA 57 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 GL++ S GE A VPA++IV SGV K I + Sbjct: 58 QAAGGLEVCSPGEYAICRRARVPAQKIVLSGVNKEESHIRSVMAEQGAGTYTAESLNQLR 117 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L + + + + ++FG+ I + + P + Sbjct: 118 LLEACAGAAGRTGVRVLLRL-------------TSGNQFGMDEEDILTSIRNRDSYPHLD 164 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIAYHSDHRPP 251 ++G+ + G+Q +E K L +R + ++ G G I Y Sbjct: 165 LAGLQYYSGTQKKGMEKIEKELVKLDSFMDFVREHLDFEFRELEYGPGFQIPYFEGQEQA 224 Query: 252 SSSDYASLIHQYFGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + +L K I LE GRFL A G +T+V +K+S + + I+D +N Sbjct: 225 DEEILLQEFKKALDSLNFKGIIFLEAGRFLAAPCGSYLTRVADVKRSQGQNYCIVDGGIN 284 Query: 310 DFMRPTL--------YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 Y + N PA + G +C +GD + N + Sbjct: 285 HVNYYGQTMAMKVPAYRYIPQDNPARPPASQTSGDRWTVCGSLCTSGDILVKNLPLDGLM 344 Query: 362 PGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIM 392 GDLL ++ GAY + + SR L ++ Sbjct: 345 TGDLLVFDRIGAYSVTEGIYLFLSRKLP-VVL 375 >gi|294011711|ref|YP_003545171.1| putative diaminopimelate decarboxylase [Sphingobium japonicum UT26S] gi|292675041|dbj|BAI96559.1| putative diaminopimelate decarboxylase [Sphingobium japonicum UT26S] Length = 390 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 66/391 (16%), Positives = 123/391 (31%), Gaps = 25/391 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + V +P + A+ +N + D V ALKA S ++ +A G+ Sbjct: 17 NRVPSPAFVVDEAAVRRNLSVLRDIGDRAGIKVLGALKAFSMWSLGPVIAEYLDGVCASG 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL-NQRAVSLG 141 E R A E + K D ++ S FN + + A + G Sbjct: 77 IYEARLAHE-EYRGEIATYCAAYKAEDLAEILKISDHVIFNSPGQIARLRPVIENARNNG 135 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I R+NP K + + G PI Q+ + + Sbjct: 136 VNFDIGLRINPLHAEGEVPKYDPSQPHSRLGFPIDQLRPEHLAGVD-----------GLH 184 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + F + + ++ + ++ ++ GGG + + + Sbjct: 185 VHNLCEQDFLPLERTWAAIESRVMPHVGGLKWLNFGGGHHVTRADYQTDLLIAFLQRIKA 244 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++ +EPG + D GIL+ +++ I D++ M + Y Sbjct: 245 ----RTGLELYIEPGEAMALDAGILIGEILD-VIDNGMPVAITDISATCHMPDVIEAPYR 299 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 G + GP C GD I R PG + Y V++ T Sbjct: 300 PAMLHEEMEG----QPTRLGGPSCLAGDIIGDYRVPGGATPGRRIAFLDQAHYSMVKTNT 355 Query: 382 YNSRLLIPEIMVNG--SQFHIIRPRMTFQEL 410 +N L + N + IR ++++ Sbjct: 356 FNGVPLPSIWLWNSETDELQQIRQ-FSYEDF 385 >gi|167743070|ref|ZP_02415844.1| bifunctional protein [Burkholderia pseudomallei 14] Length = 1095 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 713 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 772 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 773 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 832 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 833 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 884 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 885 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 939 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 940 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 999 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1000 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1055 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1056 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1085 >gi|254301549|ref|ZP_04968993.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 406e] gi|157811425|gb|EDO88595.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 406e] Length = 1101 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 719 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 778 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 779 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 838 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 839 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 890 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 891 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 945 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 946 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 1005 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1006 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1061 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1062 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1091 >gi|331266385|ref|YP_004326015.1| LysA-like decarboxylase, diaminopimelate decarboxylase putative [Streptococcus oralis Uo5] gi|326683057|emb|CBZ00674.1| LysA-like decarboxylase, diaminopimelate decarboxylase putative [Streptococcus oralis Uo5] Length = 375 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 78/390 (20%), Positives = 129/390 (33%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLGKLEANCRILQQVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L S FN E + + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKESDMEELLQISDHIVFNS----ERQLRKYGSRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ + +I S L V Sbjct: 119 GISVGLRLNPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E+ KA + Q + ++ +++GGG I S I Sbjct: 174 QGADDLETTLKAVE------AQFGPYLYKVKWLNMGGGHHITREDYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRETYNLEVYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY E Y V++ T Sbjct: 283 PPLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPIQIGDRLYFEDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ ++Q+ Sbjct: 342 FNGIGLPSLYLMDERGDCSLV-KAFSYQDF 370 >gi|326571108|gb|EGE21132.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis BC7] Length = 400 Score = 128 bits (320), Expect = 3e-27, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 112/397 (28%), Gaps = 29/397 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP+Y AI N ALK + V +++ G S Sbjct: 17 ATIQTPYYLLDERAIIDNLSITQKVCHESGVKALLALKCFATWGVFESMQPYLHGTTSSS 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+R E +S + ++ FN Sbjct: 77 LKEVRLGKE-YFGGETHAYSVAYADHEIKEVLDYCDKIIFNS--------------INQL 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 K + +I T P L + + + Sbjct: 122 KRFGQLAHDKNIPVGLRLNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIH 181 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + L D+ + H ++ I GGG+ H + + + + Sbjct: 182 NNCENTDFEAFSQSLTDIENRFGELFHRLEWISFGGGI----HYIDQNYPLDKFINKLKD 237 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG V +LVT V+ + + V+ + +Y Sbjct: 238 FSETYGVQIYLEPGEASVHQGAVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSP 297 Query: 323 INYIVNPAGDR----------LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + Y+ A D I G C GD + GD + Sbjct: 298 LAYVNETAYDTTGADFDGTSTDETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAA 357 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 AY V+ +N + +++ +I+ + +++ Sbjct: 358 AYTMVKKNWFNGVDMPSIVIIRQDGEIMIQRQFDYED 394 >gi|304436965|ref|ZP_07396928.1| carboxynorspermidine decarboxylase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369916|gb|EFM23578.1| carboxynorspermidine decarboxylase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 378 Score = 128 bits (320), Expect = 3e-27, Method: Composition-based stats. Identities = 58/381 (15%), Positives = 108/381 (28%), Gaps = 25/381 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + V TP Y +EKN + + + A K S + +G Sbjct: 11 NEVPTPSYLVYEELLEKNLKVLAEVAEDTGATILLAQKCFSMYHYYPLIGRYLAGTTASG 70 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + + E VF + + LA FN S+ E R Sbjct: 71 IYEARLSQE-EMGKENHVFKPAYEDEEIEQLASICDHIIFNSFSQWERFGTVARLHGASC 129 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + +A + K +I + + Sbjct: 130 GMRINPECSTQDHAIYDPCAPGSRLGVKTADFREEILAGLDGLHFHTLCE---------- 179 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + L + ++ H ++ ++ GGG I + Sbjct: 180 -----QGADALEETLDAVEEKFGKYLHGMKWLNFGGGHHITRVGYDISLLKKLI----RR 230 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + LEPG + + G LV++V+ ++ + P + + + Sbjct: 231 VQEKYHVAVYLEPGEAVALNAGFLVSEVLDVQAGGNVILNTSAACHM----PDVIEMPYR 286 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + GP C GD I GD + Y V++ T+ Sbjct: 287 PPVVGAGEAGEKAHTYTLAGPTCLAGDTIGTYSFDTPLCIGDRVVFGDMAIYTMVKNNTF 346 Query: 383 NSRLLIPEIMVN-GSQFHIIR 402 N L I V+ ++ +R Sbjct: 347 NGMPLPYIIAVSPQGEWETVR 367 >gi|53722474|ref|YP_111459.1| bifunctional protein [Burkholderia pseudomallei K96243] gi|52212888|emb|CAH38924.1| putative bifunctional protein [Burkholderia pseudomallei K96243] Length = 1092 Score = 128 bits (320), Expect = 3e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 710 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 769 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 770 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 829 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 830 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 881 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 882 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 936 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 937 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 996 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 997 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1052 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1053 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1082 >gi|298373786|ref|ZP_06983775.1| carboxynorspermidine decarboxylase [Bacteroidetes oral taxon 274 str. F0058] gi|298274838|gb|EFI16390.1| carboxynorspermidine decarboxylase [Bacteroidetes oral taxon 274 str. F0058] Length = 387 Score = 128 bits (320), Expect = 3e-27, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 125/393 (31%), Gaps = 21/393 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P + + +N T + + A KA + V + + S Sbjct: 12 DRIPSPCFVIDERLLRQNLDTIAQVSRRAGVEIIMAFKAFAMWKVFPIIKEYVTHTTASS 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R ++ +++ + +L S FN ++ E + G+ Sbjct: 72 LAEARLSVDKFGNKAH-LYAPAYTDGEFDELVECSTHITFNSLAQFEKYY----GRTQGR 126 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 R+NP+I+ + K + GI Q+ K+ + Sbjct: 127 DISCGLRINPEISVVETDLYNPAKAGSRLGITAEQLPE-----------KLPDGVEGLHF 175 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + S K+L L + ++ +++GGG + + Sbjct: 176 HVLCENSSFDLEKVLVGLADKFDRQLRQVKWLNMGGGHLMTRKGYNINHLIEVI---SAF 232 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 IILEPG V GIL +V I ++ +L+V+ M L Y Sbjct: 233 RQKYPHLHIILEPGAAFVWQTGILKAQVEDIVENHGIRTAMLNVSFACHMPDCLEMPYQP 292 Query: 323 INYIVNPAGDRLHIH--ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 Y + + G C +GDF+ GD++ E Y V++ Sbjct: 293 RIYGAEMTQPDAQGNNVYRMGGNSCLSGDFVGSWVFPKPLVVGDIIIFEDMIHYTTVKTT 352 Query: 381 TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 +N +V + ++ + T Q+ + Sbjct: 353 MFNGVSHPSIGIVKENGEFVLLKQFTHQDYFDR 385 >gi|300022666|ref|YP_003755277.1| carboxynorspermidine decarboxylase [Hyphomicrobium denitrificans ATCC 51888] gi|299524487|gb|ADJ22956.1| carboxynorspermidine decarboxylase [Hyphomicrobium denitrificans ATCC 51888] Length = 381 Score = 128 bits (320), Expect = 3e-27, Method: Composition-based stats. Identities = 66/396 (16%), Positives = 117/396 (29%), Gaps = 21/396 (5%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 + TP Y A+++N + + A KA + A + + G Sbjct: 4 SDWVQSIATPSYVLDMAALKRNLARAAEIKREAGCKILLATKAFALPAAFPVMREVLDGT 63 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 E E R E V+S + L + FN + E Sbjct: 64 TASGEYEARLGHE-EFGKEVHVYSPAYAPGEVERLTKLAQHIYFNSPEQIEKNLA----- 117 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + +P+++ + A+ ++ + Sbjct: 118 --------TLKAHPNVSVGLRINPGYSNATLGGALYDPCAPYSRFGATREMLDRVPWEHV 169 Query: 199 HI-GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 I + + L+ + + + ++ GGG I Sbjct: 170 GILHAHSLCESGDAGSVGLIEHVARAFPDYIRRVDAVNFGGGHFINKPG----YDIQKLI 225 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + I + ++ILEPG V D G LV V+ + +K ILD + + M L Sbjct: 226 AAIKAFRREFNVEVILEPGAGHVVDAGYLVATVLDL-HHNEKDIAILDASASTHMPDVLE 284 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 Y G++ H + G C TGD I +PGD L Y V Sbjct: 285 VPYTPSIVGAGAPGEKPH-SYILGGKTCMTGDIIGEYSFDRPLKPGDRLVFTDMMQYSFV 343 Query: 378 QSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIEL 413 ++ T+N L ++N + + E Sbjct: 344 KNNTFNGVPLPDLAVLNEDNTCTVLRAFGYDEFRRR 379 >gi|308273729|emb|CBX30331.1| hypothetical protein N47_D31400 [uncultured Desulfobacterium sp.] Length = 379 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 61/390 (15%), Positives = 122/390 (31%), Gaps = 24/390 (6%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TP Y A+E+N + + ALK + +V + SG+ Sbjct: 6 IKRISTPCYILEEEALERNLKILDSVQKQTGARIIMALKGFAMFSVFPLIRQYLSGISAS 65 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E R ++ + E + L S S+ + + Sbjct: 66 SADEARLGY--EEFGSKVHVCSPAYSDSEFNEILNY-ADYIVFNSFSQWRHFKADVTASK 122 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 KK R+NP+ + + + G ++ G+ Sbjct: 123 KKILCGIRINPEYSEVRTTIYDPCGQFSRLGTTRDN----------FKEDELDGISGIHF 172 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + ++ + + L+ + ++ + ++ I+ GGG I LI+ Sbjct: 173 HNLCEL-NSDSLLRTLKVVEEKFGLFFNRLKWINFGGGHHITRKDYDVKL----LCDLIN 227 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + + LEPG + + G+L T V+ I +K + + P + + + Sbjct: 228 DFKKRHPLDVYLEPGEAIALNAGVLETSVVDIIY--NKMNIAILDTSAATHMPDVLEMPY 285 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 N + G C GD I + G + E Y V++ T Sbjct: 286 RPNITGAGLPGEYRHTYRLGGVTCLAGDIIGDYSFPEPLKTGSRIVFEDMAHYTMVKNNT 345 Query: 382 YNSRLLIPEIMVNG--SQFHIIRPRMTFQE 409 +N L I + II+ +++ Sbjct: 346 FNGIRLPS-IAIKDKSGDIRIIKK-FGYED 373 >gi|167898681|ref|ZP_02486082.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 7894] Length = 422 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 56/395 (14%), Positives = 114/395 (28%), Gaps = 18/395 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L+ L + TP + Y + + + Y LK S+ ++ + G Sbjct: 36 LDAL-DALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDG 94 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 S E + A + + ++ + + Y + + A Sbjct: 95 FAASSPFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALA 154 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 L I + + +A K + S L G+ Sbjct: 155 GRLSCGLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH--- 211 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 F + + + L ++L + I++GGG + Sbjct: 212 -----TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFR 261 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + + + + +EPG +V G ++ V+ + S +LD +N + Y Sbjct: 262 ACAKRLREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEY 321 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + V+ + G C GD R A R G + GAY V Sbjct: 322 QFQPD----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLV 377 Query: 378 QSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 ++ +N L R ++++ + Sbjct: 378 KAHRFNGINLPSVYRRGEDGALAAVQRFSYEDFLR 412 >gi|328468746|gb|EGF39721.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus MTCC 5462] Length = 258 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 112/255 (43%), Gaps = 4/255 (1%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYA 58 M+ EG L V+ +LAH QTP Y Y AI F F+ G+ + YA Sbjct: 1 MNFATNHEGQLTIGGVAASQLAHTFQTPLYVYDVGAIRHQIRAFKQVFETAGVAYAISYA 60 Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 KA + A+ + +D+VS GEL A AA P E++ F G K+ E++ AL +G Sbjct: 61 SKAFATIAMYEVAKAEAIHVDVVSGGELYTAQAADFPMEKVSFHGNNKSKAELEQALDAG 120 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + V++ EL L++ + K + RV P I+A+TH TG+ + KFG + Sbjct: 121 VGTIIVDNFHELDLLDELLKAAVGKQNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESG 180 Query: 179 HSLYAYASTL--PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + A L + + G+ HIGSQI ++ F + L + + Sbjct: 181 QADEAAKRVLADDHLNLLGIHAHIGSQIFEVTGFEAVTQKLLAVLDHWHQQFGFTPKVLN 240 Query: 237 GGGLGIAYHSDHRPP 251 GG ++ P Sbjct: 241 VGGGFGIAYTKQDDP 255 >gi|326387667|ref|ZP_08209273.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium nitrogenifigens DSM 19370] gi|326207713|gb|EGD58524.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium nitrogenifigens DSM 19370] Length = 393 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 67/396 (16%), Positives = 125/396 (31%), Gaps = 24/396 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P + A+ +N ++ D + ALKA S V + G+ Sbjct: 18 RVDSPAFVVDAAALRRNLGVLADIRDRAGIKLLSALKAFSMWKVAPLVGDYLDGVCTSGL 77 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES-ELKTLNQRAVSLGK 142 E + A E + K D ++ S FN + + A + G Sbjct: 78 WEAKLADE-HYSGEIATYCAGYKAQDLPEICELSDHVIFNSPGQIARFADVLATARARGC 136 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + R+NP + + G PI Q+ + I Sbjct: 137 SFDVGLRINPLHAEGEVPRYDPCAPHSRLGFPISQLTQAHLEGV-----------KGIHF 185 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + + ++L+ ++ ++ GGG I + + Sbjct: 186 HTLCEQDFEPLARTWDAVKERLKPYFGQLEWLNFGGGHHITRAD----YQRDELVEFLKS 241 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 C+I LEPG + D GILV V+ ++ + + P + +A + Sbjct: 242 VKAETGCEIYLEPGEAVALDAGILVGTVLDRHENG--MPIAITDISATCHMPDVLEAPYR 299 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + GP C GD I R PG Y V++ T+ Sbjct: 300 PAMLGEWGEGSGETAVRLGGPSCLAGDVIGDYRLPVPCEPGVRFAFLDQAHYSMVKTTTF 359 Query: 383 NSRLLIPEIMVNGSQFHII--RPRMTFQELIELDSI 416 N L I + S+ ++ ++++ D + Sbjct: 360 NGVPLPS-IWLWDSESDVLECVRSFSYEDF--RDRL 392 >gi|254420585|ref|ZP_05034309.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Brevundimonas sp. BAL3] gi|196186762|gb|EDX81738.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Brevundimonas sp. BAL3] Length = 392 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 67/397 (16%), Positives = 126/397 (31%), Gaps = 27/397 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + V +P + A+ +N + + V ALKA S ++ + G+ Sbjct: 19 NRVPSPAFVVDEVAVRRNLSVLQDVGTRGNARVLLALKAFSMWSLADVVGEYLDGVCASG 78 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES-ELKTLNQRAVSLG 141 E R A +S K D ++ S FN + L A + G Sbjct: 79 LWEARLARE-FYHGHLTTYSPAYKPADLPEILRLSDTVIFNAPDQIARFADLIAAARAGG 137 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + I R+NP+ + K + + G P+ Q+ + + Sbjct: 138 ETFDIGLRLNPEHSEGQVAKYDPCQLGSRLGFPVSQLTPEHLQGVD-----------GLH 186 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + F ++ + +L +++ I++GGG + + Sbjct: 187 IHALCEQGFEPLKRIWAAVEPKLTPLLPDLKWINLGGGHHVTRAD----YRIDALVGFLK 242 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++ +EPG + D GILV +V+ + L +A+ D Sbjct: 243 DLGERYGLQVYIEPGEAIALDAGILVGEVLDTFHNG------LPIAITDISATCHMPDVI 296 Query: 322 EINYIVNPAGDRLH-IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 E Y + + + GP C GD I P G + Y V++ Sbjct: 297 EAPYRPAMLNEAEGGVTYRLGGPSCLAGDIIGDYGFTTAPTAGTRIAFLDQAHYSMVKTN 356 Query: 381 TYNSRLLIPEIMVNGSQFHI-IRPRMTFQELIELDSI 416 T+N L + N + + + E D + Sbjct: 357 TFNGVPLPAIALWNSDTDALKLVREFDYSEF--RDRL 391 >gi|34540015|ref|NP_904494.1| carboxynorspermidine decarboxylase [Porphyromonas gingivalis W83] gi|34396326|gb|AAQ65393.1| carboxynorspermidine decarboxylase [Porphyromonas gingivalis W83] Length = 378 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 59/383 (15%), Positives = 114/383 (29%), Gaps = 19/383 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 +P Y + +N ++ D + A KA + + S E Sbjct: 9 SPAYILEEDLLRRNLSLIASVADRTGVEIILAFKAYALWRTFPIIREYVPHSTASSVWEA 68 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R A + + Y +V S + + + Sbjct: 69 RLAFEEMGAPAH-----TFSPAYTPEEFPEILRYSSHVTFNSLSQYYLLSPMVKNVGVSL 123 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP+ +A + +FG+ AS L G++ + + Sbjct: 124 GLRINPEYSAVETALYNPCAPGSRFGVS----------ASELGDTLPEGIEGLHFHTLCE 173 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + K L+ + + S +++GGG + ++ Sbjct: 174 STGYE-LEKTLKIIEDRFASVLEQAHWLNMGGGHLMTRRDYDVEHLVQVLNDFSRRHPHL 232 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +I+EPG G L + V+ I + I+DV+ M L Y + Sbjct: 233 H---LIMEPGSAFGWQTGFLKSTVVDIVEHQGIATAIVDVSFTCHMPDCLEMPYKPVIRG 289 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + I G C +GDFI + GD L E Y V++ +N Sbjct: 290 AHQEPVPGLPTYRIGGCSCLSGDFIGDWSFDRPLQVGDELIFEDMLHYTTVKTTMFNGAR 349 Query: 387 LIPEIMVNGSQFHIIRPRMTFQE 409 +++ + R +++ Sbjct: 350 HPDIVLLRTDGKKEVLRRFDYED 372 >gi|194207728|ref|XP_001499776.2| PREDICTED: similar to arginine decarboxylase [Equus caballus] Length = 505 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 73/369 (19%), Positives = 131/369 (35%), Gaps = 30/369 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ A+ + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAVVRKHFCFLKCLPR--VRPFYAVKCNSSLGVLKVLAELGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPA +I+++ K I I A + G+ + ++E EL + + S IA Sbjct: 99 VQRIGVPASKIIYANPCKQIAHIKYAAKHGVRLLSFDNEIELAKVVKSHPSARMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A V++ GV HIGS + Sbjct: 158 ---------TDDSHSLSRLSFKFGASLKSCRHLLENAKKS-HVEVVGVSFHIGSDCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + + Sbjct: 208 AYAQSIADARLVFEIGAELGHRMHILDLGGGFPGVEGTKVRFEEITSVINSALDLYFPED 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK---------------SADKTFVILDVAMNDF 311 I+ + GR+ V L +I+ K+ + + + F Sbjct: 268 CGVDILAKLGRYYVTSAFTLAISIIAKKEVLLDQPSREEENSSAPKTIVYHLHEGVYGIF 327 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P+ ++ + + GP + D +A + GD L E Sbjct: 328 NSVLFDNTCPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFEHM 387 Query: 372 GAYGAVQSG 380 GAY Sbjct: 388 GAYTVGMGS 396 >gi|76818456|ref|YP_335638.1| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1710b] gi|76582929|gb|ABA52403.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1710b] Length = 1076 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 694 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 753 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 754 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 813 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 814 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 865 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 866 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 920 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 921 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 980 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 981 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1036 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1037 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1066 >gi|301774454|ref|XP_002922649.1| PREDICTED: antizyme inhibitor 1-like [Ailuropoda melanoleuca] Length = 448 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 73/378 (19%), Positives = 121/378 (32%), Gaps = 28/378 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQIKP--FYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I++ K + +I A + G+ ++E ELK +++ + IA Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKIGVNIMTCDNEVELKKISRNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQY 263 + A R + G + +D+GGG + P Y Sbjct: 207 VYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGV 266 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMR 313 + F +A I V + K S+ + + D F Sbjct: 267 KIISEPGSYYVSSAFTLAVNIIAKKVVENDKFSSGVEKTGSDEPAFMYYMNDGVYGSFAS 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 D D + + GP C+ D I + + GD L + GA Sbjct: 327 KLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGA 386 Query: 374 YGAVQSGTYNSRLLIPEI 391 + +N Sbjct: 387 DSLHEPSAFNDFQRPAIY 404 >gi|326560498|gb|EGE10880.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 7169] Length = 400 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 58/397 (14%), Positives = 113/397 (28%), Gaps = 29/397 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP+Y AI N ALK + V +++ G S Sbjct: 17 ATIQTPYYLLDERAIIDNLSVTQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSS 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+R E +S + ++ FN ++ + Sbjct: 77 LKEVRLGKECFG-GETHAYSVAYADHEIKEVLGYCDKIIFNSINQLKRFGP--------- 126 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + +I T P L + + + Sbjct: 127 -----LAHDKNIPVGLRLNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIH 181 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + L D+ + H ++ I GGG+ H + + + + Sbjct: 182 NNCENTDFEAFSQSLTDIENRFGELFHRLEWISFGGGI----HYIDQNYPLDKFINRLKN 237 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG V +LVT V+ + + V+ + +Y Sbjct: 238 FSETYGVQIYLEPGEASVHQGAVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSP 297 Query: 323 INYIVNPAGD----------RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + Y+ D I G C GD + GD + Sbjct: 298 LAYVNETTYDITGADFDGTSADETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAA 357 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 AY V+ +N + +++ +I+ + +++ Sbjct: 358 AYTMVKKNWFNGVDMPSIVIIRQDGEIMIQRQFDYED 394 >gi|238927123|ref|ZP_04658883.1| carboxynorspermidine decarboxylase [Selenomonas flueggei ATCC 43531] gi|238885103|gb|EEQ48741.1| carboxynorspermidine decarboxylase [Selenomonas flueggei ATCC 43531] Length = 378 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 67/381 (17%), Positives = 119/381 (31%), Gaps = 25/381 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + V TP Y +EKN + + + A K S + +G Sbjct: 11 NEVPTPSYLVYEELLEKNLKVLAEVAEDTGAAILLAQKCFSMYHYYPLIGRYLAGTTASG 70 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + + E VF + + LA FN S+ E R + Sbjct: 71 IYEARLSQE-EMGRENHVFKPAYEDEEIEQLASICDHIIFNSFSQWERFGTAARLHGVSC 129 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + +A + K + + + Sbjct: 130 GMRINPECSTQDHAIYDPCAPGSRLGVKIADFREDLLAGLDGLHFHTLCE---------- 179 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + L + ++ H ++ ++ GGG +H S LI + Sbjct: 180 -----QGADALEETLDAVEEKFGKYLHGMKWLNFGGG----HHITRVGYDISLLKKLIRR 230 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + LEPG + + G LV++V+ ++ + IL+ + M + Y Sbjct: 231 VQEKYHVAVYLEPGEAVALNAGFLVSEVLDVQAGGNV---ILNTSAVCHMPDVIEMPYRP 287 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 AG+R H + GP C GD I GD + Y V++ T+ Sbjct: 288 PVVGAGKAGERAH-TYTLAGPTCLAGDTIGTYSFDTPLCIGDRVVFGDMAIYTMVKNNTF 346 Query: 383 NSRLLIPEIMVN-GSQFHIIR 402 N L I V+ ++ +R Sbjct: 347 NGMPLPHIIAVSPQGEWETVR 367 >gi|256545739|ref|ZP_05473095.1| diaminopimelate decarboxylase [Anaerococcus vaginalis ATCC 51170] gi|256398435|gb|EEU12056.1| diaminopimelate decarboxylase [Anaerococcus vaginalis ATCC 51170] Length = 393 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 98/391 (25%), Positives = 163/391 (41%), Gaps = 37/391 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y I+K+ F+ + Y++KAN VIKT+ G G D S E+ Sbjct: 15 PCYIYQKEIIDKSCQKLQEKFE--NIEFLYSIKANPFMPVIKTIKENGIGSDAASSNEVL 72 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 ++ A + +I +S GKT++++ A F +S EL L + A + G+ I Sbjct: 73 LSIKAGMEKNQIYYSAPGKTMEDLQKAW--DKCIFIADSFHELDLLEKLAKNHGEILEIG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNP+ + KFGI +I S T +K+ G+ +H+ SQI Sbjct: 131 IRVNPNYS-----MTDKKAHSSKFGIDEDKIFSFD---WTYKNLKLVGLHVHVQSQILDT 182 Query: 208 ESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSS-SDYASLIHQYFG 265 +K DL + H +I+ I+ G G+G+AY + + A + + Sbjct: 183 NLLSNYYKNTYDLAVKFSKLSHADIKFINFGSGIGVAYDKKNEDDVNLDILAKTMKDLYE 242 Query: 266 NLQCK----IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL----- 316 + + ++E GRFLV D G T +I K S KT++++ AMN F++ + Sbjct: 243 KNKNELGAKFLIESGRFLVMDSGTYYTPIIDKKYSNGKTYLVVKNAMNGFVKGPMKEMLK 302 Query: 317 ----YDAYHEINYIVNPAGDRL---------HIHADIVGPICETGDFIALNRKIALPRPG 363 Y+ + DI G +C + D +A + ++ G Sbjct: 303 QALGYECKKAFEPLYTGKNQCEFEIIGENSQKEIVDIGGHLCTSLDLLASDIELKKANIG 362 Query: 364 DLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 D+L + GAY S + S L E ++ Sbjct: 363 DILKVSNAGAYCFSLSILHFASHDLPKEFLI 393 >gi|254186770|ref|ZP_04893286.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei Pasteur 52237] gi|157934454|gb|EDO90124.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei Pasteur 52237] Length = 1116 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 734 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 793 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 794 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 853 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 854 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 905 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 906 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 960 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 961 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 1020 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1021 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1076 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1077 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1106 >gi|226196072|ref|ZP_03791658.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei Pakistan 9] gi|254193632|ref|ZP_04900064.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei S13] gi|169650383|gb|EDS83076.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei S13] gi|225931965|gb|EEH27966.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei Pakistan 9] Length = 1122 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 740 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 799 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 800 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 859 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 860 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 911 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 912 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 966 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 967 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 1026 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1027 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1082 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1083 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1112 >gi|126458140|ref|YP_001076002.1| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1106a] gi|242312184|ref|ZP_04811201.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1106b] gi|126231908|gb|ABN95321.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1106a] gi|242135423|gb|EES21826.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1106b] Length = 1134 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 752 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 811 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 812 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 871 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 872 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 923 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 924 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 978 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 979 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 1038 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1039 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1094 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1095 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1124 >gi|329964808|ref|ZP_08301831.1| carboxynorspermidine decarboxylase [Bacteroides fluxus YIT 12057] gi|328524659|gb|EGF51722.1| carboxynorspermidine decarboxylase [Bacteroides fluxus YIT 12057] Length = 381 Score = 127 bits (319), Expect = 4e-27, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 116/385 (30%), Gaps = 18/385 (4%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 +P Y + +N + D + A K+ + S Sbjct: 9 FPSPCYIMEEELLRRNLALIKSVAHRADVEIILAFKSFAMWRSFPVFREYVEHSTASSVY 68 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R A+ +S D ++ S FN ++ A G Sbjct: 69 EARLAMEEFGSKAHT-YSPAYTEADFPEIMRCSSHITFNSLAQFNRFYPVTVAAGSGISC 127 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + + + + +FG+ Q+ + + Sbjct: 128 GVRINPEY--SEVETELYNPCAPGTRFGLMADQLPEV-----------LPQGIEGFHCHC 174 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 S ++ + L + + I+ +++GGG + L +Y Sbjct: 175 HCESSSYELERTLAHVEAKFSKWFSQIKWLNLGGGHLMTRKDYDVEHLIRLLQGLKARYP 234 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +IILEPG G+L ++V+ + ++ IL+V+ M L Y Sbjct: 235 HL---RIILEPGSAFTWQTGVLTSEVVDVVENRGIRTAILNVSFTCHMPDCLEMPYQPSV 291 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 + ++ + G C +GD++ L R G+ + E Y V++ +N Sbjct: 292 RGARMGNEGPYV-YRLGGNSCLSGDYMGLWSFDHELRIGERIVFEDMIHYTMVKTNMFNG 350 Query: 385 RLLIPEIMVNGSQFHIIRPRMTFQE 409 M I + ++++ Sbjct: 351 IHHPAIAMWTKKGNAEIYKQFSYED 375 >gi|134282506|ref|ZP_01769210.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 305] gi|134246063|gb|EBA46153.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 305] Length = 1110 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 728 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 787 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 788 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 847 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 848 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 899 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 900 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 954 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 955 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 1014 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1015 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1070 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1071 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1100 >gi|254209204|ref|ZP_04915551.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei JHU] gi|147750427|gb|EDK57497.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei JHU] Length = 1083 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 701 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 760 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 761 PFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 820 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 821 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 872 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 873 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 927 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 928 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 987 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 988 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1043 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1044 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1073 >gi|308161400|gb|EFO63849.1| Ornithine decarboxylase [Giardia lamblia P15] Length = 448 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 78/412 (18%), Positives = 149/412 (36%), Gaps = 60/412 (14%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 + + IEK+Y + V YA+K N + ++++L LG+G D S E+R AL Sbjct: 41 VLNVSEIEKHYNIWKTHLPE--VQVRYAVKCNMHPLLLRSLHLLGAGFDCASPAEVRAAL 98 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 +A P +I+++ K I+ A + F +SE EL ++ + S + + Sbjct: 99 SAGCPPSKIIYANPQKPKRSIEEAFRLNCNTFTFDSEHELLSMLESTPSGKVGRFVLRLL 158 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 PD +++ + KFG + + L L + G H+GS ++SF Sbjct: 159 PPDESSS------ICRFGVKFGASPSECYRLIRLCKHLG-ANLVGFSFHVGSGCGSVDSF 211 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY------- 263 A + + + + + G + +++GGG H + + Sbjct: 212 RLAVRYMGEAAKFAKEQGFTLTVLNIGGGYMSKGAERHYDEPNKHAHITPPSFEEIAAAL 271 Query: 264 ------------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD------------- 298 + +I+ EPGRF D+ L T++ + D Sbjct: 272 REEIDKIKIYFTNKSEDLEIMAEPGRFFAGDIMTLGTRIYGRRIIFDKIEDNSCLTEKEI 331 Query: 299 ---------KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI----------HAD 339 + + + + L+D + G+ + + Sbjct: 332 MESGKASINEVKYYVGDGVYGYYNAILFDHVVPHLRFTDKHGNCKELSEAHIGSSLNTSS 391 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 I GP C++ D I RK+ L GD + + GAY + +N + + Sbjct: 392 IFGPTCDSLDCILKERKLPLLDVGDWVITDAFGAYTYAAATEFNGIPHVSVV 443 >gi|281353345|gb|EFB28929.1| hypothetical protein PANDA_013260 [Ailuropoda melanoleuca] Length = 381 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 73/386 (18%), Positives = 120/386 (31%), Gaps = 35/386 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG--- 84 PF + + + F A + YA+K NS+ V++ LA LG+ D S+ Sbjct: 5 PFMVANLGVLASRHQAFCRALPWVSP--FYAVKRNSSIWVLRVLAILGTSFDCASQMSPE 62 Query: 85 ----------ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 EL + L V RI+++ K + I A G+ +SE EL + Sbjct: 63 AAPECPPCQVELEQVLGLGVAPSRIIYANPCKPVSHIQYAACRGVQLMTFDSEEELTKVA 122 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 Q + + + +T KFG + L A L + Sbjct: 123 QHHPKAR----LVLWLWTQDSESTFP------LSAKFGATLEVCEHLLQSARALGLAVVG 172 Query: 195 -GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 M Q + + A + + ++ I G + + Sbjct: 173 ASFHMGSNCQTARSFTQAFADCRRVFEMGRASRHDMSLLDIGGGFPGEEGFEPKFEEMAR 232 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTK------VISIKKSADKTFVILDVA 307 A L + +II EPG F A V V+ + V L+ Sbjct: 233 VINAVLAQDFPVGGGVEIIAEPGHFYAASVCTAAVNIIAKKAVLQPGGRPPQAGVHLNEG 292 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLH-IHADIVGPICETGDF-IALNRKIALPRPGDL 365 R + + +V G + + GP C+ D + GD Sbjct: 293 HYGIFRIFSREPVPRMPIVVKVRGPQPPLFPCTLYGPTCDAFDKLFPGELPMPELDVGDW 352 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEI 391 L + GAY S T+N L + Sbjct: 353 LVLPSMGAYTTTVSSTFNGF-LPASV 377 >gi|322391913|ref|ZP_08065378.1| carboxynorspermidine decarboxylase [Streptococcus peroris ATCC 700780] gi|321145393|gb|EFX40789.1| carboxynorspermidine decarboxylase [Streptococcus peroris ATCC 700780] Length = 375 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 74/390 (18%), Positives = 126/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E+N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEENCSILHQVQEKAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L S FN E + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKEADMEELLQISDHIVFNS----ERQLRKYGQRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ + +I S L V Sbjct: 119 GISVGLRLNPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDL-----LELVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + Q + H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------DQFGAYLHQVKWLNMGGGHHITRDDYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + + +EPG + + G L T+V+ I ++ +T V+ A + + + Sbjct: 224 RIRETYDLDVYIEPGEAIALNAGYLATEVLDIVENGIETLVLDASASCHMP--DVLEMPY 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + C TGD I GD LY E Y V++ T Sbjct: 282 RPPLRNGFEAQEKAYTYRLSSNTCLTGDIIGDYSFENPVNIGDRLYFEDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ + ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDKEGECSLV-KAFGYQDF 370 >gi|149024019|gb|EDL80516.1| rCG31109, isoform CRA_a [Rattus norvegicus] Length = 459 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 132/363 (36%), Gaps = 29/363 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ A+ + + F YA++ NS+ V+K LA LG G S+ E+ Sbjct: 41 FFVADLGAVVRKHFCFLKYLPR--VRPFYAVRCNSSLGVLKVLAELGLGFSCASKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPA +I+ + K + +I A + G+ + ++E EL + + S IA Sbjct: 99 VQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S +FG + L A V++ GV HIGS + Sbjct: 158 ---------TQDSHSLNHLSLRFGASLKSCRHLLENAKQS-HVEVVGVSFHIGSGCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + Q GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADARLVFQMGAELGHTMNILDLGGGFPGLEGAKVRFEDMASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKT--------------FVILDVAMNDFM 312 I+ E GR+ V + +++ K+ D+ + + + F Sbjct: 268 CGVDILAELGRYYVTSAFTVAVSIVAKKEVLDQPSREEQTGAAPKSIVYHLDEGVYGVFN 327 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + P+ D+ + + GP + D +A + + GD L + G Sbjct: 328 SVLFDNTCPTPALQKKPSADQPLYSSSLWGPAVDGCDCVAEGLWLPQLQVGDWLVFDNMG 387 Query: 373 AYG 375 AY Sbjct: 388 AYT 390 >gi|314912082|gb|ADT63774.1| arginine decarboxylase [Rattus norvegicus] Length = 459 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 132/363 (36%), Gaps = 29/363 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ A+ + + F YA++ NS+ V+K LA LG G S+ E+ Sbjct: 41 FFVADLGAVVRKHFCFLKYLPR--VRPFYAVRCNSSLGVLKVLAELGLGFSCASKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPA +I+ + K + +I A + G+ + ++E EL + + S IA Sbjct: 99 VQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S +FG + L A V++ GV HIGS + Sbjct: 158 ---------TQDSHSLNHLSLRFGASLKSCRHLLENAKQS-HVEVVGVSFHIGSGCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + Q GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADARLVFQMGAELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKT--------------FVILDVAMNDFM 312 I+ E GR+ V + +++ K+ D+ + + + F Sbjct: 268 CGVDILAELGRYYVTSAFTVAVSIVAKKEVLDQPSREEQTGAAPKSIVYHLDEGVYGVFN 327 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + P+ D+ + + GP + D +A + + GD L + G Sbjct: 328 SVLFDNTCPTPALQKKPSADQPLYSSSLWGPAVDGCDCVAEGLWLPQLQVGDWLVFDNMG 387 Query: 373 AYG 375 AY Sbjct: 388 AYT 390 >gi|293365437|ref|ZP_06612146.1| carboxynorspermidine decarboxylase [Streptococcus oralis ATCC 35037] gi|307703392|ref|ZP_07640334.1| carboxynorspermidine decarboxylase [Streptococcus oralis ATCC 35037] gi|291315805|gb|EFE56249.1| carboxynorspermidine decarboxylase [Streptococcus oralis ATCC 35037] gi|307622799|gb|EFO01794.1| carboxynorspermidine decarboxylase [Streptococcus oralis ATCC 35037] Length = 375 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 77/390 (19%), Positives = 129/390 (33%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E+N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEENCRILQQVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K +D +L + FN E + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDVDMEELLEITDHIVFNS----ERQLRKHGPRCRDA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ + +I S L V Sbjct: 119 GISVGLRLNPQCSTQGDHALYDPCAPGSRFGVTLDKIPS-----DLLDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + Q H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVET------QFGPYLHKVKWLNMGGGHHITIEGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRETYHLEVYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY E Y V++ T Sbjct: 283 PPLRNGFDAREKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDKLYFEDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDERGDCSLV-KAFGYQDF 370 >gi|62079257|ref|NP_001014283.1| hypothetical protein LOC366473 [Rattus norvegicus] gi|50925583|gb|AAH78981.1| Similar to ornithine decarboxylase-like protein [Rattus norvegicus] Length = 494 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 132/363 (36%), Gaps = 29/363 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ A+ + + F YA++ NS+ V+K LA LG G S+ E+ Sbjct: 41 FFVADLGAVVRKHFCFLKYLPR--VRPFYAVRCNSSLGVLKVLAELGLGFSCASKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPA +I+ + K + +I A + G+ + ++E EL + + S IA Sbjct: 99 VQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S +FG + L A V++ GV HIGS + Sbjct: 158 ---------TQDSHSLNHLSLRFGASLKSCRHLLENAKQS-HVEVVGVSFHIGSGCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + Q GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADARLVFQMGAELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKT--------------FVILDVAMNDFM 312 I+ E GR+ V + +++ K+ D+ + + + F Sbjct: 268 CGVDILAELGRYYVTSAFTVAVSIVAKKEVLDQPSREEQTGAAPKSIVYHLDEGVYGVFN 327 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + P+ D+ + + GP + D +A + + GD L + G Sbjct: 328 SVLFDNTCPTPALQKKPSADQPLYSSSLWGPAVDGCDCVAEGLWLPQLQVGDWLVFDNMG 387 Query: 373 AYG 375 AY Sbjct: 388 AYT 390 >gi|124382045|ref|YP_001024476.1| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia mallei NCTC 10229] Length = 1086 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 704 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 763 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 764 PFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 823 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 824 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 875 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 876 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 930 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 931 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 990 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 991 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1046 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1047 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1076 >gi|167923209|ref|ZP_02510300.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei BCC215] Length = 1086 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 704 DALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 763 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 764 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 823 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 824 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 875 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 876 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 930 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 931 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 990 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 991 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1046 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1047 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1076 >gi|254265028|ref|ZP_04955893.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1710a] gi|254216030|gb|EET05415.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1710a] Length = 1128 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 746 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 805 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 806 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 865 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 866 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 917 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 918 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 972 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 973 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 1032 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1033 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1088 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1089 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1118 >gi|53717527|ref|YP_105509.1| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia mallei ATCC 23344] gi|238563454|ref|ZP_00438861.2| iron-sulfur cluster-binding protein, Rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei GB8 horse 4] gi|52423497|gb|AAU47067.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia mallei ATCC 23344] gi|238520680|gb|EEP84138.1| iron-sulfur cluster-binding protein, Rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei GB8 horse 4] Length = 1055 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 673 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 732 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 733 PFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 792 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 793 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 844 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 845 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 899 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 900 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 959 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 960 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1015 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1016 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1045 >gi|49474810|ref|YP_032852.1| carboxynorspermidine decarboxylase [Bartonella quintana str. Toulouse] gi|49240314|emb|CAF26796.1| Carboxynorspermidine decarboxylase [Bartonella quintana str. Toulouse] Length = 365 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 54/383 (14%), Positives = 113/383 (29%), Gaps = 27/383 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + + +N + + + ALK + ++ ++ G S EL Sbjct: 4 TPYYLIDKSKLIRNMEIITRVREMSGAKILLALKCFATWSLFDLMSEYMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + + + QR K Sbjct: 64 RLGREKFGKETHAYSVA-------WADDEIDEVCNYADKIIFNSIQQLQRFSKTPKTIQR 116 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP I+A+ + + + G + ++ + + Sbjct: 117 GLRLNPGISASNFDLANPSRPFSRLGETNQSAIKKV----------LPLINGLMIHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F+ K+L + +Q + I +GGG+ H +A + + Sbjct: 167 NADFNLFNKMLSHMEEQFAELFAAVDWISLGGGI----HFTAENYPLETFAERLKHFSKT 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 I LEPG + L V+ ++ K ++ + +Y Sbjct: 223 YGVTIFLEPGEAAITKSTTLEVSVLDTLENEKKLAIVDSSTEAHMLDLLIY------REN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 ++ + G C GD R + GD L + Y V+ +N Sbjct: 277 AKLEPNQGPHEIMVCGKSCLAGDIFGTFRFPEPLKIGDRLSFQDAAGYTMVKKNWFNGLQ 336 Query: 387 LIPEIMVNGSQFHIIRPRMTFQE 409 + ++ S II+ + ++ + Sbjct: 337 MPAIVVKECSGALIIQRQFSYND 359 >gi|167760022|ref|ZP_02432149.1| hypothetical protein CLOSCI_02394 [Clostridium scindens ATCC 35704] gi|167662315|gb|EDS06445.1| hypothetical protein CLOSCI_02394 [Clostridium scindens ATCC 35704] Length = 416 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 84/420 (20%), Positives = 154/420 (36%), Gaps = 43/420 (10%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L ++A +TP Y + ++K G +CYA+KAN ++K L + Sbjct: 6 LRQIAGKYETPSYVFHIDELKKRIAMIREILGG-KASLCYAMKANP--FLVKPLKDVVDK 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 ++ S GE +P ERIV SGV K +I + + E + + Sbjct: 63 YEVCSPGEFGICETCQIPMERIVLSGVYKEEKDIAHVMCNYRDKGTYT--IESASHLELL 120 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 K I R + + ++FG+ +I + + V I G+ Sbjct: 121 EQCACKEGIRIRALIRVTSG-----------NQFGMDEAEICRIIERRNEYSHVNIIGLQ 169 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + G+Q ++ K + L +L L+ + + + ++ G G + Y S Sbjct: 170 HYSGTQKKKLAKIKKELEHLDELITMLKESYGYEAEELEYGPGFYVPYFSTDEEADDEAM 229 Query: 257 ASLIHQY--FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + Q KI LE GR+L A G +T ++ K++ + + I+D ++ Sbjct: 230 LKEFAGFLSELRFQGKITLEMGRYLAAYCGCYLTAIVDQKENMGQKYCIVDGGIHHLTYF 289 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADI----------------------VGPICETGDFIA 352 A +Y + + + G +C D I Sbjct: 290 GQAMAMKRPHYRQYHEEEGRYEEVSVDKEQKGIKQEDFSQKDVTEWNVCGSLCTVNDVIV 349 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQ-FHIIRPRMTFQEL 410 N + + GD+L E+TGAY + + SR L + + S+ + R R + E+ Sbjct: 350 KNLPLQQAKIGDILVFERTGAYSVTEGMYLFLSRDLPQVLFYSKSEGIKVARRRRSTDEI 409 >gi|262192870|ref|YP_001078798.2| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia mallei NCTC 10247] gi|261826618|gb|ABM99334.2| rieske [2Fe-2S] domain/carboxynorspermidine decarboxylase [Burkholderia mallei NCTC 10229] gi|261834998|gb|ABO02524.2| rieske [2Fe-2S] domain/carboxynorspermidine decarboxylase [Burkholderia mallei NCTC 10247] Length = 1058 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 676 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 735 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 736 PFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 795 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 796 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 847 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 848 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 902 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 903 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 962 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 963 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1018 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1019 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1048 >gi|251767426|ref|ZP_02267226.2| iron-sulfur cluster-binding protein, Rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei PRL-20] gi|243062753|gb|EES44939.1| iron-sulfur cluster-binding protein, Rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei PRL-20] Length = 1067 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 685 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 744 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 745 PFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 804 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 805 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 856 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 857 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 911 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 912 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 971 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 972 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1027 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1028 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1057 >gi|149927611|ref|ZP_01915864.1| putative diaminopimelate decarboxylase protein [Limnobacter sp. MED105] gi|149823665|gb|EDM82893.1| putative diaminopimelate decarboxylase protein [Limnobacter sp. MED105] Length = 391 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 83/357 (23%), Positives = 146/357 (40%), Gaps = 10/357 (2%) Query: 26 QTP---FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 TP Y Y+ A+ + + + YA KAN + ++ TLA G + S Sbjct: 16 GTPPWCAYVYNLPALAAHAQYMKRHLPR-NCELYYAAKANPDVRLLNTLAPHVDGFEAAS 74 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GEL + ++F G GKT +++ +L + C +VES +ELK L + G+ Sbjct: 75 AGELAHLNDQHFS-KPLIFGGPGKTTEDLQQSLHQKVACIHVESLTELKRLALVCANTGQ 133 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I R+N ++ K+ G + FG+ + + A P ++ G H S Sbjct: 134 TQAIMLRMNITLDGVASSKLQMGGQATPFGLDPCDLGTALALLQESPHLEFEGFHFHSMS 193 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYAS--- 258 +E+ K ++T+Q S H + I+VGGG+G+ Y + +++ + Sbjct: 194 HQLCVENHLKLIARYFEITRQWESQWHIRCKVINVGGGIGVNYQCVDEQFNWAEFCTGLG 253 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + +I E GR++ A G V +VI +K+S + F I + F P Sbjct: 254 ELITQHDMQTRQIRFECGRYVSAFCGYYVMEVIDLKQSHGQWFAIGKGGTHHFRTPAAQG 313 Query: 319 AYHE-INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 H + ++ ++VG +C D + + GD + GAY Sbjct: 314 HNHPVWVHRNGQTAVVVNSTVNVVGQLCTPKDRLHQQLTVQELALGDYMVFTLAGAY 370 >gi|145345663|ref|XP_001417323.1| Ornithine decarboxylase [Ostreococcus lucimarinus CCE9901] gi|144577550|gb|ABO95616.1| Ornithine decarboxylase [Ostreococcus lucimarinus CCE9901] Length = 547 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 70/380 (18%), Positives = 135/380 (35%), Gaps = 37/380 (9%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 ++ Y +A+K ++ +I TLA LG+G D S+GE+ Sbjct: 140 IVDLATVKALYDYHKAKLPR--VRPHFAVKCLPDRGIISTLAALGAGFDCASQGEVELVT 197 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 VP+ERI+ + K ++ + + +S SEL + V + I Sbjct: 198 GLGVPSERIILAHPVKRPCDLRCIAEYEVPYTTFDSVSELHKILASKVKVKLILRIR--- 254 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 ++ K+G P+ ++ L + A+ L + ++GV H+GS +++ Sbjct: 255 -------ADDPMARLPLGAKYGAPLDKVSELLSVAALL-NLDVAGVSFHVGSSSRNPDAY 306 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH--------SDHRPPSSSDYASLIHQ 262 A + R + + + G N+ +D+GGG ++ + + Sbjct: 307 RNAIQFARKIFDEAKEIGFNMHLLDIGGGFTGSFDANGNVTEAPSNFDRVRDALDEIFPD 366 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKV-------------ISIKKSADKTFVILDVAMN 309 +II EPGR+ + V D + + + Sbjct: 367 DGTFEGLQIIDEPGRYFAQAPVTMACLVYGTREGTNDAGERHMDYYITDGLYGSFNGIIY 426 Query: 310 DFMRPTLYDAYHEINYI---VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 D + Y ++ D++ I + + GP C++ D + N + GD L Sbjct: 427 DGLDLPTYFLQPNKVAPLAGIDNDFDKIKISSTVYGPTCDSLDCVMRNIPLPELSNGDWL 486 Query: 367 YIEKTGAYGAVQSGTYNSRL 386 GAY + +N L Sbjct: 487 MFPDAGAYTMAGACDFNGIL 506 >gi|307720965|ref|YP_003892105.1| carboxynorspermidine decarboxylase [Sulfurimonas autotrophica DSM 16294] gi|306979058|gb|ADN09093.1| carboxynorspermidine decarboxylase [Sulfurimonas autotrophica DSM 16294] Length = 379 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 56/389 (14%), Positives = 120/389 (30%), Gaps = 21/389 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + TP Y +EKN + ALK + + A G Sbjct: 3 QISTPCYICEEELLEKNLKILEYVQQQSGAKIILALKGFAMWSTFDLAAKYLKGCTASGL 62 Query: 84 GE--LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E L R V + +E + S ++L+ + + Sbjct: 63 YEAKLAREEFCKYNKNAEVHTYSPAYKEEEIEEIAKISDHIVFNSPNQLQKYICKVKEIN 122 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 ++ RVNP+++++ + + G + K+ + Sbjct: 123 PNIHVSLRVNPEVSSSPVDIYNPCGLYSRLGTTLQNFDE-----------KVLKYIDGLN 171 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 ++ ++L ++ N+++I+ GGG +H + +I Sbjct: 172 FHALCEQNADALEEVLAAFEEKFAKYFTNLKYINFGGG----HHITKKDYDVEKLIWIIK 227 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++ + LEPG + + G L + V+ + ++ + + + P + Sbjct: 228 EFRNKYNVDVYLEPGEAVGWETGYLESTVLDVFENG--MNIAILDTSAEAHMPDTLAMPY 285 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + + G C GD + A GD + E Y V++ T Sbjct: 286 RAEVRGAGVANEKKYTYRLGGNTCLAGDIMGDYSFDAPLHVGDTIIFEDQIHYTFVKNTT 345 Query: 382 YNSRLLIP-EIMVNGSQFHIIRPRMTFQE 409 +N L I + II+ +++ Sbjct: 346 FNGVKLPSLAIKRKNGEIEIIKE-FGYED 373 >gi|326575703|gb|EGE25626.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis CO72] Length = 400 Score = 127 bits (318), Expect = 5e-27, Method: Composition-based stats. Identities = 61/397 (15%), Positives = 112/397 (28%), Gaps = 29/397 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP+Y AI N ALK + V +++ G S Sbjct: 17 ATIQTPYYLLDERAIIDNLSVTQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSS 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+R E +S + ++ FN Sbjct: 77 LKEVRLGKECFG-GETHAYSVAYADHEIKEVLDYCDKIIFNS--------------INQL 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 K + +I T P L Y + + Sbjct: 122 KRFGQLAHDKNIPVGLRLNPQTSNSSFIIADPARPFSRLGEYDVESIMAIADQITGVMIH 181 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + L D+ H ++ I GGG+ H + + + + Sbjct: 182 NNCENTDFEAFSQSLTDIENHFGELFHRLEWISFGGGI----HYIDQNYPLDKFINRLKN 237 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG V +LVT V+ + + V+ + +Y Sbjct: 238 FSETYGVQIYLEPGEASVHQGAVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSP 297 Query: 323 INYIVNPAGD----------RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + Y+ + A D I G C GD + GD + Sbjct: 298 LAYVNDTAYDITGADFDGTSADETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAA 357 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 AY V+ +N + +++ +I+ + +++ Sbjct: 358 AYTMVKKNWFNGVDMPSIVIIRQDGKIMIQRQFDYED 394 >gi|257791928|ref|YP_003182534.1| Diaminopimelate decarboxylase [Eggerthella lenta DSM 2243] gi|257475825|gb|ACV56145.1| Diaminopimelate decarboxylase [Eggerthella lenta DSM 2243] Length = 412 Score = 127 bits (318), Expect = 5e-27, Method: Composition-based stats. Identities = 79/405 (19%), Positives = 150/405 (37%), Gaps = 25/405 (6%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 + ++ +L+ TP Y + + + +CYA+KAN ++ Sbjct: 1 MMIDDATLQNALDACPTPLYLFDHQVLNDRITRLRASLP-SRIKLCYAMKANP--FIVLE 57 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + L ++ S GE+ A VP E+IV SGV K +D Q+ ES Sbjct: 58 ASALADCVEACSPGEVLICANAGVPFEKIVLSGVWKDRRCLDDLFQADRIPHRFTIESSQ 117 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + ++ + + ++FG+ + L A P Sbjct: 118 QLKDLVVLANAYRRRVNVLFRLSSE-------------NQFGVDSATLKELIAGCKDDPF 164 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHR 249 + I G+ + G+Q ++ + L + ++ + + I+ G GL + Y + Sbjct: 165 ISIQGIQYYSGTQKTSLKKLDRELNKLHRIVAEVEAACSVKLNEIEYGPGLPVEYFDEDE 224 Query: 250 PPSSSDYASLIHQY-----FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + S + + + ++LE GR + AD G +T V+ +K ++ + + I+ Sbjct: 225 ERARSAQDEPVAELATLLDGFPFEGDVVLELGRSIAADCGAYLTSVVDVKTTSGQNYAIV 284 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D M+ A + A +I G +C D +A I GD Sbjct: 285 DGGMHQISYYGHSMAMKSPVFRKVGATAGAAQPWNICGALCTVNDILAKQAPIVDLSVGD 344 Query: 365 LLYIEKTGAYGAVQS-GTYNSRLLIPEIMVN-GSQFHIIRPR-MT 406 +L + GAY A + + SR L ++ + I R R T Sbjct: 345 VLAFSRAGAYCATEGRALFLSRDLPSVVVRDVSGNMRIARHRLET 389 >gi|291562597|emb|CBL41413.1| carboxynorspermidine decarboxylase [butyrate-producing bacterium SS3/4] Length = 377 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 65/393 (16%), Positives = 115/393 (29%), Gaps = 21/393 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + + TP Y + KN D + A KA SN + G Sbjct: 3 INELPTPCYVIDEKKLRKNLEILKKVKDDTGCKILLAQKAFSNFFEYPLIGQYLDGTTAS 62 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E + + E VF+ K + ++ FN S+ E G Sbjct: 63 GLFEAKLGYE-KMGKENHVFAPAFKESEIGEITDICEHLVFNSFSQLE--KYADFCKEKG 119 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I H + G+ + + + Sbjct: 120 VSIGIRVNPECST-QGDHAIYDPCAPGSRLGVTLANFRE-----DLVEKLDGIHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E+ KA + + NI+ +++GGG +H I Sbjct: 174 QNSDDLETTLKAVEEKFGKYLK----LPNIKWLNMGGG----HHITRNDYDIDRLERCIR 225 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +EPG + + G LVT+V+ I + +T ++ A + + + Sbjct: 226 HMQETYDVTVYVEPGEAVALNAGYLVTEVMDIVDNGIRTLILDASAACHMP--DVLEMPY 283 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + D + C GD I R GD LY E Y V++ T Sbjct: 284 RPPLKDSGEADEKQYTYRLSSMTCLAGDVIGDYSFDHEIRIGDRLYFEDMAIYSMVKNNT 343 Query: 382 YNSRLLIPEI-MVNGSQFHIIRPRMTFQELIEL 413 +N L M + ++ ++E + Sbjct: 344 FNGMCLPSIARMDENGECSVV-KTFGYEEFVRR 375 >gi|254293193|ref|YP_003059216.1| Orn/DAP/Arg decarboxylase 2 [Hirschia baltica ATCC 49814] gi|254041724|gb|ACT58519.1| Orn/DAP/Arg decarboxylase 2 [Hirschia baltica ATCC 49814] Length = 403 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 105/361 (29%), Gaps = 16/361 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 +P C + F N F G V YA+KAN + + + G D+ S E Sbjct: 18 SPVACVRPERVSTAAAWFQNHFPG---DVLYAVKANPSPWALDAMYEAGMRWFDVASLEE 74 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + A + G+ F ++ E+EL+ + + Sbjct: 75 IELVANRFDDAVLAYMHPIKSRNSIERAYFDYGVRIFVLDCEAELQKILEATDFAKDLTL 134 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + A+ + K FG + GV H+GSQ Sbjct: 135 VVRMAVSNDGAS----MPLSGKFGCFGDDAAHLLQAAR-----SYADELGVSFHVGSQCM 185 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 ++ A + + Q + L + + Sbjct: 186 DPGAYRIAMDTVSNTIVQAAVTVDIVDVGGGFPALYPGMQPPELQSYIDVINQVFEEMPV 245 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + EPGR LVAD +V KV ++ + D + + Sbjct: 246 LFNADLWCEPGRALVADSTSIVAKVELVRDGRVYLNDGAYGNLFDAAHCKW--PFPMEVH 303 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNS 384 V+ I GP C++ D + + + GD + GAYG S +N Sbjct: 304 RVSGKTSIHSKPFTIYGPTCDSIDVLDGVFDLPADIQEGDYIEFGMMGAYGTAMSTRFNG 363 Query: 385 R 385 Sbjct: 364 F 364 >gi|217425313|ref|ZP_03456807.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 576] gi|217391564|gb|EEC31592.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 576] Length = 1110 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 728 DALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 787 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 788 PFEAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 847 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 848 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 899 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 900 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 954 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 955 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 1014 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1015 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1070 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1071 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1100 >gi|220926699|ref|YP_002502001.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060] gi|219951306|gb|ACL61698.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060] Length = 403 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 80/390 (20%), Positives = 140/390 (35%), Gaps = 20/390 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + + +A+ + T YA+KAN++ V++ LA +G ++ S GE+ R Sbjct: 23 AFLHDLSALGEQARALRAPLP-PGTDFFYAVKANNDPQVLRALAPHVAGFEVASAGEIVR 81 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A A RIV G +T +I L G+ +VES ++ N A G P+ Sbjct: 82 VRQAVGSAARIVMGGPARTEGDIRTLLAFGVERLHVESAQAMRLANAVAARAGATIPVLL 141 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 RVN G +FGI I ++ G H S Sbjct: 142 RVNLAGPVPGATLTMGGAA-TQFGIEQSAIPDALTILRDCRALRFEGFHFHTVSNNRDAA 200 Query: 209 SFHKAF-KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L +G +++ +++GGG G+ Y +A Sbjct: 201 AHAALCTAELAMARGLAAEHGLDLRIVNLGGGWGVDYADPDWRFDVIGFA--RALTPHAK 258 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 ++ E GR + A V ++I +K+ + F +L + F P+ + H + Sbjct: 259 GLRLQFECGRIVAAYHAAYVCEIIDLKQVHGRAFALLRGGTHHFRLPSSWSHNHPFEILP 318 Query: 328 NPAGDRL-------HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + G +C D +A + + R GDL+ ++ GAYG S Sbjct: 319 REEWSHPWPRPELLDTKLTLAGELCTPKDVLARDVPVPRARIGDLVCLQMAGAYGWDISH 378 Query: 381 T-YNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + I ++ S R T ++ Sbjct: 379 HDFLCHARPERIFLSSS-------RETTEQ 401 >gi|254355511|ref|ZP_04971791.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei 2002721280] gi|148023604|gb|EDK82666.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei 2002721280] Length = 1110 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 728 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 787 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 788 PFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 847 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 848 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 899 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 900 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 954 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 955 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 1014 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1015 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1070 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1071 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1100 >gi|254204234|ref|ZP_04910593.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei FMH] gi|147745118|gb|EDK52199.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia mallei FMH] Length = 1107 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 725 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 784 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 785 PFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 844 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 845 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 896 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 897 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 951 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 952 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 1011 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1012 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1067 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1068 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1097 >gi|121597394|ref|YP_990159.1| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia mallei SAVP1] gi|254174356|ref|ZP_04881018.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia mallei ATCC 10399] gi|121225192|gb|ABM48723.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia mallei SAVP1] gi|160695402|gb|EDP85372.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia mallei ATCC 10399] Length = 1113 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 731 EALDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 790 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 791 PFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 850 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 851 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 902 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 903 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 957 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 958 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 1017 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1018 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1073 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1074 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1103 >gi|55853671|gb|AAV67809.1| siderophore synthesis decarboxylase [Ralstonia solanacearum] Length = 413 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 99/393 (25%), Positives = 158/393 (40%), Gaps = 25/393 (6%) Query: 19 EKLAHVV----QTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 +L P Y Y + + S + YA+KANS+ V+ L Sbjct: 3 RELIERYLQDAPAPVCAYLYDLDHLRERAGRLSAMLP-PGCELFYAIKANSDAPVLAALD 61 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 +G ++ S GE+ RA A RIVF G GKT E+ AL+ G+ +VESE +L+ Sbjct: 62 GAVAGYEVASLGEVVRAREVGAHA-RIVFGGPGKTDAELQGALERGVELIHVESELQLRR 120 Query: 133 LNQRAVSLGKKAPIAFRVNPDI----NANTHKKISTGKKEDK--FGIPIHQIHSLYAYAS 186 L+ A +G++A + RVNP+ +A + + FGI + L A Sbjct: 121 LDAVARRMGRRARVLLRVNPNPLSADSAGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLAR 180 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYH 245 L GV++ G+ +H S +S + L +LR + ++VGGG+G+ Y Sbjct: 181 GLAGVEVVGLHLHALSNNLDADSHLALMRHYLALALRLRREHGLTLDTLNVGGGIGVDYV 240 Query: 246 SDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + C+I+ E GRF+ AD G VT+V+ IK++ K F + Sbjct: 241 QPSHAFDWRRFCDGLGALLAEAGAGCRIVFECGRFIAADCGYYVTEVVDIKRNHGKWFAV 300 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRL-------HIHADIVGPICETGDFIALNRK 356 L + F + H + N + G +C D +A + Sbjct: 301 LRGGTHHFRLTASWQHNHPFAIVPNAQWTYPFARPSVQAQAVTLCGELCTPKDVLARDVV 360 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLI 388 + GD + + GAYG S + S Sbjct: 361 VDRLSVGDRIVFQLAGAYGWHISHHDFLSHPHP 393 >gi|33322676|gb|AAQ07072.1|AF496385_1 diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. lactis] Length = 219 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 4/219 (1%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVI 68 L V +LA QTP + I + F F+ G+D V YA KA S A+ Sbjct: 1 LQIAGVDALELAAKYQTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLAIY 60 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + + G D+VS GEL A+ A P +++ F G K+ E+++A+ G+ +++ Sbjct: 61 QVINEEGGHTDVVSGGELWTAMKAGFPMDKVSFHGNNKSRAELEMAVDQGVGVIILDNFH 120 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E+ L+Q + + RV P I+A+T++ I TG+ + KFG + + A L Sbjct: 121 EIDLLSQILEEKDASSKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALELVL 180 Query: 189 --PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 P +K++G+ HIGSQI + F L L + Sbjct: 181 ANPRMKMAGIHAHIGSQIFDVRGFVGCADKLCQLASAWK 219 >gi|296113122|ref|YP_003627060.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis RH4] gi|295920816|gb|ADG61167.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis RH4] Length = 400 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 111/397 (27%), Gaps = 29/397 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP+Y AI N ALK + V +++ G S Sbjct: 17 ATIQTPYYLLDERAIIDNLSITQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSS 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+R E +S + ++ FN Sbjct: 77 LKEVRLGKECFG-GETHAYSVAYADHEIKEVLGYCDKIIFNS--------------INQL 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 K + +I T P L + + + Sbjct: 122 KRFGQLADDKNIPVGLRLNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIH 181 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + L D+ + H ++ I GGG+ H + + + + Sbjct: 182 NNCENTDFEAFSQSLTDIENRFGELFHRLEWISFGGGI----HYIDQNYPLDKFINRLKN 237 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG V +LVT V+ + + V+ + +Y Sbjct: 238 FSETYGVQIYLEPGEASVHQGAVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSP 297 Query: 323 INYIVNPAGD----------RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + Y+ D I G C GD + GD + Sbjct: 298 LAYVNETTYDITGADFDGTSTDETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAA 357 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 AY V+ +N + +++ +I+ + +++ Sbjct: 358 AYTMVKKNWFNGVDMPSIVIIRQDGEIMIQRQFDYED 394 >gi|123388346|ref|XP_001299560.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] gi|121880433|gb|EAX86630.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] Length = 396 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 82/364 (22%), Positives = 134/364 (36%), Gaps = 19/364 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + YA+K ++K LA G G D S+ E++R Sbjct: 33 FWVADFNRVRHCLALWEENLNR--VHIHYAMKCCDEPELLKFLADRGVGYDCASQDEVQR 90 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V A RIVF+ K+I I A + G+ +SE EL+ + + I Sbjct: 91 ILALGVDANRIVFAHPIKSIASIKYAKEHGVTRLVYDSEEELRKILRYYPEAEVFLRIKP 150 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R + +KFG + L AS L G H+GS D I Sbjct: 151 RFTHA----------KIQLSNKFGADPKDVPKLMQLASELGA-NFIGFSFHVGSLCDDIT 199 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD--YASLIHQYFGN 266 +F A + + +L + G N+ +D+GGG + + I + F Sbjct: 200 TFRVALEYVAELKAKAEQIGLNVSFVDIGGGFLPPSVKAKYTFAEIAEAINTAIDELFDG 259 Query: 267 LQCKIILEPGRFLVADVGILVTKV----ISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + + EPGRF+ +D LV V + +++ + + F A Sbjct: 260 DEIEFLAEPGRFIASDFMDLVIPVISVKDHHEDGEEQSVFMAEGIYGAFNALNYDHAEPH 319 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 A D + + G C++ D + GD L IEK GAY + + Sbjct: 320 FLIRTEGAADGERVKTTLWGQTCDSADLVYEELLWPRLEVGDYLTIEKFGAYTYSPTSFF 379 Query: 383 NSRL 386 N Sbjct: 380 NGFP 383 >gi|6562332|emb|CAB62550.1| diaminopimelate decarboxylase [Arabidopsis thaliana] Length = 145 Score = 126 bits (317), Expect = 6e-27, Method: Composition-based stats. Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 1/141 (0%) Query: 274 EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR 333 E GR L+A+ V V +K + K F+++D +M + +RP+LYDAY I + + Sbjct: 1 ELGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPPEA 60 Query: 334 LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 D+VGP+CE+ DF+ +R++ P G L + GAY + TYN ++ PE V Sbjct: 61 EVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKMRPPEYWV 120 Query: 394 -NGSQFHIIRPRMTFQELIEL 413 IR TF + + Sbjct: 121 EEDGSITKIRHAETFDDHLRF 141 >gi|300696992|ref|YP_003747653.1| diaminopimelate decarboxylase protein (lysA) [Ralstonia solanacearum CFBP2957] gi|299073716|emb|CBJ53236.1| putative diaminopimelate decarboxylase protein (lysA) [Ralstonia solanacearum CFBP2957] Length = 413 Score = 126 bits (317), Expect = 6e-27, Method: Composition-based stats. Identities = 102/393 (25%), Positives = 159/393 (40%), Gaps = 25/393 (6%) Query: 19 EKLAHVV---QT-PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 +L T P Y Y + + S + YA+KANS+ V+ L Sbjct: 3 RELIERYLQDATAPVCAYLYDLDHLRERAGRLSAMLP-PGCELFYAIKANSDAPVLAALD 61 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 +G ++ S GE+ RA A RIVF G GKT E+ AL+ GI +VESE +L+ Sbjct: 62 GAVAGYEVASLGEVVRAREVSAHA-RIVFGGPGKTDAELQGALERGIELIHVESELQLRR 120 Query: 133 LNQRAVSLGKKAPIAFRVNPDI----NANTHKKISTGKKEDK--FGIPIHQIHSLYAYAS 186 L+ A +G+ A + RVNP+ +A + + FGI + L A Sbjct: 121 LDAVACRMGRCARVLLRVNPNPLSADSAGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLAR 180 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYH 245 L GV++ G+ +H S +S + L +LR + ++VGGG+G+ Y Sbjct: 181 GLAGVEVVGLHLHALSNNLDADSHLALMRHYLALALRLRREHGLTLDTLNVGGGIGVDYA 240 Query: 246 SDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + C+I+ E GRF+ AD G VT+V+ IK++ K F + Sbjct: 241 QPSHAFDWRRFCDGLGALLAEAGAGCRIVFECGRFITADCGYYVTEVVDIKRNHGKWFAV 300 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRL-------HIHADIVGPICETGDFIALNRK 356 L + F P + H + N + G +C D +A + Sbjct: 301 LRGGTHHFRLPASWQHNHPFAIVPNAQWTYPFARPSVQAQAVTLCGELCTPKDVLARDVV 360 Query: 357 IALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLI 388 + GD + + GAYG S + S Sbjct: 361 VDRLSVGDRIVFQLAGAYGWHISHHDFLSHPHP 393 >gi|224417821|ref|ZP_03655827.1| carboxynorspermidine decarboxylase NspC [Helicobacter canadensis MIT 98-5491] gi|253827161|ref|ZP_04870046.1| carboxynorspermidine decarboxylase NspC [Helicobacter canadensis MIT 98-5491] gi|313141362|ref|ZP_07803555.1| carboxynorspermidine decarboxylase [Helicobacter canadensis MIT 98-5491] gi|253510567|gb|EES89226.1| carboxynorspermidine decarboxylase NspC [Helicobacter canadensis MIT 98-5491] gi|313130393|gb|EFR48010.1| carboxynorspermidine decarboxylase [Helicobacter canadensis MIT 98-5491] Length = 403 Score = 126 bits (317), Expect = 6e-27, Method: Composition-based stats. Identities = 65/391 (16%), Positives = 108/391 (27%), Gaps = 25/391 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y KN + + ALK + SG+ Sbjct: 11 EAIPSPCYVLEEEKFIKNLEILDSIQKESGAKILLALKGYALWRSFDIAKKYLSGITASG 70 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL--NQRAVSL 140 E R E FS K + +L S FN + + ++ Sbjct: 71 LYEARLGYE-TFGGEITTFSPAYKYEEMQELVKISDHIIFNSFLQWQTFKPLIDEANQWR 129 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 K + RVNP + T + + + GI + + Sbjct: 130 KNKIQVGLRVNPQYSEVTPAIYNPCVEGSRLGITPKEFKKGVKKYGLKGI-------SGL 182 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 ++ + L+ Q +Q I+ GGG I +R +I Sbjct: 183 HFHTHCEQNSDALKRTLKYFIQHFGKYIPQMQWINFGGGHHITRKDYNREL----LVKII 238 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA----------DKTFVILDVAMND 310 ++ ++ LEPG + G L+ VI I + Sbjct: 239 KKFKKRFDVQVYLEPGEAVGWQCGFLMGSVIDIVHNGVDIAILDVSATAHMPDCLEMPYR 298 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 M Y A GP C GD I + GD + E Sbjct: 299 PMVRNSYLAKATSKNGHLKLKGEQKYTYRFGGPTCLAGDIIGDYSFKEPLKLGDRIIFED 358 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNG-SQFHI 400 Y V++ T+N L M++ +F + Sbjct: 359 MVHYTIVKNNTFNGVPLPSIGMIDKEGRFKL 389 >gi|16330194|ref|NP_440922.1| carboxynorspermidine decarboxylase [Synechocystis sp. PCC 6803] gi|1652682|dbj|BAA17602.1| carboxynorspermidine decarboxylase [Synechocystis sp. PCC 6803] Length = 387 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 71/403 (17%), Positives = 125/403 (31%), Gaps = 29/403 (7%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS+F L EN L L +P + +++N F V ALK Sbjct: 1 MSSFAV--NIL--ENPRLSSL----PSPCFVLEEELLQQNLAIFERLQQSAPIEVMLALK 52 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 + L +G S E R A E V++ + D + + Sbjct: 53 GFALFPCFPWLRSGLAGASASSLWEARLAAE-EFGKEVHVYAPTYRPDDLPAIIPLASHI 111 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 FN + + N + A + P Sbjct: 112 TFNSLGQWHRYRES--------------LKNTAVKAGLRINPEYSPVQTDLYNPCVSGSR 157 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L A+ L G SG+ + + + K L + + I+ +++GGG Sbjct: 158 LGVQAAMLAGNLPSGITGFLSHNLCES-DHLALEKTLGQIEKLFGEYLPQIEWLNLGGGH 216 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 + A + + + ++I+EPG + G L++ V + ++ + T Sbjct: 217 LMTSQGYDMD---YAIAVIGEFHQRHPHLRLIMEPGSAIAWQTGFLLSTVEDLIETPEFT 273 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +LDV+ M L Y + + G C GDF+ Sbjct: 274 HAMLDVSFTAHMPDCLEMPYRPEVRGARVPQTGDTV-YRLGGSSCLAGDFLGDYAFDQPL 332 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIR 402 + GD L E Y V++ T+N + +F + R Sbjct: 333 QVGDRLIFEDMMHYTMVKTTTFNGVHHPAIGCLRRSGEFELWR 375 >gi|319902364|ref|YP_004162092.1| carboxynorspermidine decarboxylase [Bacteroides helcogenes P 36-108] gi|319417395|gb|ADV44506.1| carboxynorspermidine decarboxylase [Bacteroides helcogenes P 36-108] Length = 381 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 118/386 (30%), Gaps = 20/386 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 +P Y + +N + D + A K+ + S Sbjct: 9 FPSPCYIMEEELLRRNLTLIKSVADRAGVEIILAFKSFAMWRSFPVFREYIEHSTASSVY 68 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R AL +S D ++ SG FN + A G Sbjct: 69 EARLALEEFGSKAHT-YSPAYTEADFPEIMRCSGHITFNSLMQFHRFYPMTVAEGSGISC 127 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I + + + +FG+ A LP + G++ Sbjct: 128 GIRINPEY--SEVETELYNPCAPGTRFGL----------MADQLPEILPYGIEGFHCHCH 175 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + S+ L R + + I+ +++GGG + L +Y Sbjct: 176 CESSSYELEHTLERMEGKFSKWFS-QIKWLNLGGGHLMTRKDYDIEHLIRLLQGLKERYP 234 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +IILEPG G+L ++V+ I ++ +L+V+ M L Y Sbjct: 235 HL---QIILEPGSAFTWQTGVLTSEVVDIVENRGIRTAVLNVSFTCHMPDCLEMPYQPSV 291 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 + H+ + G C +GD++ + G+ + E Y V++ +N Sbjct: 292 RGAQIGSEGAHV-YRLGGNSCLSGDYMGFWSFDHELQIGERIVFEDMIHYTMVKTNMFNG 350 Query: 385 RLLIPEIMV-NGSQFHIIRPRMTFQE 409 M I + ++++ Sbjct: 351 IHHPAIAMWTEEGNAEIFKQ-FSYED 375 >gi|70986558|ref|XP_748770.1| ornithine decarboxylase [Aspergillus fumigatus Af293] gi|66846400|gb|EAL86732.1| ornithine decarboxylase, putative [Aspergillus fumigatus Af293] Length = 443 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 83/403 (20%), Positives = 147/403 (36%), Gaps = 41/403 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + ++ + YA+K N N+ ++ L+ G+G D S+ E+++ Sbjct: 37 FFVGNLDSVLDRLEEWRRELPF--VQPFYAVKCNDNKTLLTLLSRAGTGFDCASKKEMQQ 94 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V ERI+F+ K D I+ A + GI V+SE EL+ L + I Sbjct: 95 ILQLGVNPERIIFAAPRKAEDYINYAHEHGIDKIVVDSEDELRKLAE----------IVP 144 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + S + +KFG + + + A L VK++G+ H+GS Sbjct: 145 SAMIFLRLRADDPTSRVRLSEKFGSDLLEARGILQVAVDLS-VKVTGICFHVGSAALDPG 203 Query: 209 SFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ +A + R++ + + I GG + P+ A + + G Sbjct: 204 AYVRAIAMAREVYDYNETLSSKHPILIIDIGGGFTESNFRLLAPAVRSAADM--YFGGET 261 Query: 268 QCKIILEPGRFLVADVGILVTKV--------------------ISIKKSADKTFVILDVA 307 + + EPGRF+V++ LV +V + D + A Sbjct: 262 GIQWVAEPGRFIVSEAFYLVCRVLGTRKRLVEYVDGPNQNHYFHAELFVNDGIYQNFLNA 321 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLL 366 + + PT P + + G C D I N ++ + GDLL Sbjct: 322 LVEGYIPTPVPLDPSGRPYGLPEREDKSYSYTVWGQTCCGADKIKSNCRLRCEMQAGDLL 381 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 GAY V + +N + S +R R +E Sbjct: 382 CFPSMGAYTHVTASGFNGFTARAMTVWTSS----VRGREKLKE 420 >gi|149186769|ref|ZP_01865080.1| carboxynorspermidine decarboxylase [Erythrobacter sp. SD-21] gi|148829677|gb|EDL48117.1| carboxynorspermidine decarboxylase [Erythrobacter sp. SD-21] Length = 392 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 116/384 (30%), Gaps = 22/384 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + V +P + + N ++ D + V ALKA S + + G+ Sbjct: 17 NRVDSPAFVVDAAKLRANCQILADIRDEAEIKVLSALKAFSMWSAAPIIGEYLDGVCTSG 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK-TLNQRAVSLG 141 E R A E + K + ++ S FN + + A + G Sbjct: 77 LWEARLASE-FYDGEISTYCAAYKPEELDEVCRLSDHVIFNSPGQMSRAALILDNARASG 135 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + R+NP + + + G P+ Q+ +I I Sbjct: 136 QDFEVGLRINPQVPTGEVPRYDPSSPGSRLGFPLDQL-----------TPEIMEGVEGIH 184 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + + + ++ I++GGG I + + Sbjct: 185 FHNLCEQDLEPLIQTWDRVFDAIEPWFGQLKWINMGGGHHITRAD----YQREELIEFLK 240 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I LEPG + D GILV ++ + + ++ Sbjct: 241 DAKDDTGAEIYLEPGEAVALDAGILVGTILDTGYNGLPVAI---ADVSATCHMPDVIEAP 297 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 ++ A D I GP C GD I R G Y V++ T Sbjct: 298 YRPAMLGEASDHETPEVRIGGPSCLAGDVIGDYRIPGGAEVGKRFAFLDQAHYSMVKTNT 357 Query: 382 YNSRLLIPEIMVNG--SQFHIIRP 403 +N L M + Q +++ Sbjct: 358 FNGVQLPSIYMWDSETDQLELVKE 381 >gi|300787026|ref|YP_003767317.1| ornithine decarboxylase [Amycolatopsis mediterranei U32] gi|299796540|gb|ADJ46915.1| ornithine decarboxylase [Amycolatopsis mediterranei U32] Length = 384 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 77/366 (21%), Positives = 133/366 (36%), Gaps = 21/366 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP T A+ F AF G ++ YA+KAN V+ L G G D+ E Sbjct: 18 PTPCLVVDTDAVAARAGEFGAAFPG--ALIRYAVKANPAPPVLDALVAAGIGFDVAGPAE 75 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L L I + K EI A G+ F ++ +++ L + A Sbjct: 76 LELCLGRGAAPAEIAYGNPIKKPREIAFAFGRGVREFTSDAPADVDHLGRYAPGAAVSIR 135 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + S KFG + L A+ L +GSQ Sbjct: 136 VVLDA----------PDSATPFGRKFGCAPAEALDLVLRAAALGLRPGIAFH--VGSQQP 183 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + ++ L + ++G + +++GGG A+ + ++ Sbjct: 184 DVTAWGIGVATAAKLFAEAAAHGVEMTRLNLGGGFATAHRTAVPSLAAYAATIAAALDAA 243 Query: 266 NL--QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + +++LEPGR LVAD G+L T+V+ + ++ +V LD+ + + + Sbjct: 244 FPAGRPELLLEPGRVLVADAGLLRTEVVLVADRGERRWVYLDIGRYNGLA-EAENEAIAY 302 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSG 380 + D + GP C+ D + ++ R GD L + TGAY A + Sbjct: 303 RFEPVGCHDGPSGPVVLAGPTCDGDDVLYQRTRYELPRSLRTGDRLDVPGTGAYTASYAS 362 Query: 381 T-YNSR 385 +N Sbjct: 363 VGFNGI 368 >gi|254444830|ref|ZP_05058306.1| carboxynorspermidine decarboxylase [Verrucomicrobiae bacterium DG1235] gi|198259138|gb|EDY83446.1| carboxynorspermidine decarboxylase [Verrucomicrobiae bacterium DG1235] Length = 387 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 49/385 (12%), Positives = 110/385 (28%), Gaps = 20/385 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 +P Y + N + + + ALK + +V + +G+ E Sbjct: 16 PSPAYVVDLARLRSNMEIIQSIQEQTGAKILAALKGFAMHSVFPLMRDYVAGVCASGPWE 75 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + A + + T ++ L + + S ++ + Sbjct: 76 AQLG--AEEFGKEVHCFAPAFTAVDMQEVLTY-AHHISFNSLAQFHQHQPAVAESKRTVS 132 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 RVNP+ + + + GI + ++ G+ Sbjct: 133 CGLRVNPEYSEVETDIYNPCVAGSRLGI-------RRPALAGQDLSEVEGLHF----HTM 181 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 ++ + L + ++ ++ GGG I + Sbjct: 182 CEQNSDTLERTLEHFEAKFGDLLPQMKWVNFGGGHHITSPTYDLERLVRVL---KAFKSR 238 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + + G+LV V+ + + + P + + + Sbjct: 239 YPHLEVYLEPGEAMAINTGVLVATVLD--IIDEAPPIAVLDLSATCHMPDVLEMPYRPEI 296 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + G C GD I +PGD +Y Y V++ T+N Sbjct: 297 VDAAEAGVKAHTYSLGGLSCLAGDMIGHYSFDQPLQPGDKIYFLDMAHYTMVKTSTFNGI 356 Query: 386 LLIPEIMVN-GSQFHIIRPRMTFQE 409 N ++ I +++ Sbjct: 357 KHPAIATWNPDTKDLTIVREFGYED 381 >gi|149194966|ref|ZP_01872059.1| Carboxynorspermidine decarboxylase [Caminibacter mediatlanticus TB-2] gi|149134887|gb|EDM23370.1| Carboxynorspermidine decarboxylase [Caminibacter mediatlanticus TB-2] Length = 371 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 120/385 (31%), Gaps = 24/385 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP Y +E N N D + ALK + + L +G E Sbjct: 5 TPAYVIEEDKLENNLKILKNVQDKAGCKILVALKGYATWSTFDLLEKYLAGATASGLWEA 64 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + A P E +S K + ++A S FN ++ E + + +KA I Sbjct: 65 KLAQM--KPWEVHTYSPAYKDDEIDEIADISHTVIFNSFNQLE-----RFENRVKQKALI 117 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 RVNP +++ + GI +SG+ H + Sbjct: 118 GLRVNPGVSSAPVPLYDPCAPYSRLGIT-------KENFKANKLKNVSGLHFHTLCEQLD 170 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + L + + +++ ++ GGG I + ++Y Sbjct: 171 ----DALERTLEEFEKLYGEYLKDMEWVNFGGGHHITRKGYNVENLIKMIKEFKNRYPNI 226 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + LEPG + + G L+ +V+ I + + + + P + + Sbjct: 227 K--DVYLEPGEAVGLNAGYLIAEVLDIVDNG--MKIAILDTSAEAHMPDVLAMPYRPEVR 282 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 G C GD I + GD + E Y V++ +N Sbjct: 283 NAGKPGEKKYTYRFGGVTCLAGDVIGDYSFDEELKVGDKVIFEDMAIYTMVKNTAFNGVR 342 Query: 387 LIPEIM-VNGSQFHIIRPRMTFQEL 410 L ++ F +R F++ Sbjct: 343 LPSIVVKRKNGDFWKVRE-FHFEDF 366 >gi|126445408|ref|YP_001063058.1| Rieske family iron-sulfur cluster-binding protein /carboxynorspermidine decarboxylase [Burkholderia pseudomallei 668] gi|126224899|gb|ABN88404.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 668] Length = 1110 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 110/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 TP + Y + + + Y LK S+ ++ + G S Sbjct: 728 DAFDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 787 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 788 PFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 847 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 848 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 899 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 900 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 954 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 955 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 1014 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1015 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1070 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1071 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1100 >gi|325180947|emb|CCA15357.1| pyridoxaldependent decarboxylase putative [Albugo laibachii Nc14] Length = 1659 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 89/415 (21%), Positives = 161/415 (38%), Gaps = 33/415 (7%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 Y AI+ + ++F +A+K IK G++ S E++ AL Sbjct: 1244 VYDLNAIDSAIQSLKSSFPTH-FEHRFAMKTCPLSFFIKKAIENHIGIECASVIEVKHAL 1302 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT------LNQRAVSLGKKA 144 P +IV++ KT +E+ AL +G+ E Q L + Sbjct: 1303 RLGCPPHQIVYNSPCKTRNELAFALSAGVDVNADNFEELDIITELVLACFQPESKLDQIP 1362 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I R+NP + A + +ST + KFG+ + + ++G+ H+GSQ Sbjct: 1363 RICLRINPLVGAGHNAILSTSTRTSKFGVTLTTENRARIITYFRDNQWLAGLHCHVGSQG 1422 Query: 205 DQIESFHK---AFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 +E K A L D ++L S I+ +++GGGL + Y + P+ ++YA+++ Sbjct: 1423 CSLELLAKGAAALCELSDDIERLTSTSKRIRVLNIGGGLPVNYSASESTPTFAEYANVLK 1482 Query: 262 QY----FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND------- 310 + F II E G+ + A G +VT+V +K + T + A Sbjct: 1483 KCAPQLFDKNDRTIITEFGQSISAKSGWIVTQVEYVKSLGEDTLSEIPEAAYQTAIVHAG 1542 Query: 311 -------FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 RP L+ + A + + +I GP+C GD + + + Sbjct: 1543 SDLFLRACYRPDLFPVRISVYQANGNASENEEMLQNIAGPLCFGGDLVGRSILVPRIERN 1602 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHII----RPRMTFQELIEL 413 DLL + TGA + SR + ++ + + T +E++ Sbjct: 1603 DLLVMHDTGANTISLFSRHCSRAAPCVYGYHTDGNGELVLSLLKAKETAEEVMRF 1657 >gi|116749354|ref|YP_846041.1| carboxynorspermidine decarboxylase [Syntrophobacter fumaroxidans MPOB] gi|116698418|gb|ABK17606.1| carboxynorspermidine decarboxylase [Syntrophobacter fumaroxidans MPOB] Length = 378 Score = 126 bits (316), Expect = 8e-27, Method: Composition-based stats. Identities = 63/385 (16%), Positives = 119/385 (30%), Gaps = 24/385 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP Y A+++N + ALK + ++ + + +G+ S E Sbjct: 10 TPCYVVDEAALDRNLAVLDTVRQRTGCRILMALKGFAMFSLFPQIREVLAGVAASSPDEA 69 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R E ++ + + +L S S+ R Sbjct: 70 RLGFE-EFRGEVHAYAPAYRESELTELLEYCDH--LVFNSFSQWNRFKSRVFDHPAPVRC 126 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 RVNP+ + + + + G+P + G+ + + Sbjct: 127 GIRVNPEHSEVSVPIYDPCARFSRLGVPRSAFREE----------DLDGISGLHFHTLCE 176 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 +++ + L + + ++ ++ GGG I LI + Sbjct: 177 LDAD-SLERTLAAFETRFGAFLERMEWVNFGGGHHITRPDYDVDL----LCRLIDDFRSR 231 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +I LEPG + + GIL V+ + + ILD + M L Y Sbjct: 232 HPLEIYLEPGEAVALNTGILGASVLDLIH-NEMDIAILDTSAAAHMPDVLEMPYRPEIDG 290 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 G+ H + G C GD I R G L Y V++ T+N Sbjct: 291 AGMPGEYPH-TYRLGGLTCLAGDVIGDYSFPEPLRIGSKLAFLDMAHYTMVKNNTFNGVR 349 Query: 387 LIPEIMVNG--SQFHIIRPRMTFQE 409 L I + ++R +++ Sbjct: 350 LPS-IAIRDRRGNVRVVRK-FGYED 372 >gi|322374305|ref|ZP_08048819.1| carboxynorspermidine decarboxylase [Streptococcus sp. C300] gi|321279805|gb|EFX56844.1| carboxynorspermidine decarboxylase [Streptococcus sp. C300] Length = 375 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 77/382 (20%), Positives = 128/382 (33%), Gaps = 24/382 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E+N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEENCRILQQVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + A Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDADLEELLEITDHIVFNS----ERQLRKHGARCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ + ++ S L V Sbjct: 119 GISVGLRLNPQCSTQGDHALYDPCAPGSRFGVSLDKVPS-----DLLDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E+ KA + Q H ++ +++GGG I S I Sbjct: 174 QGADDLETTLKAVE------AQFGPYLHEVKWLNMGGGHHITREDYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRETYNLEVYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I GD LY E Y V++ T Sbjct: 283 PPLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVEIGDRLYFEDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIR 402 +N L +++ + ++++ Sbjct: 342 FNGIGLPSLYLMDEQGECNLVK 363 >gi|330809265|ref|YP_004353727.1| carboxynorspermidine decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377373|gb|AEA68723.1| carboxynorspermidine decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 365 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 47/387 (12%), Positives = 101/387 (26%), Gaps = 29/387 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + N + + ALK + +V + G S EL Sbjct: 4 TPYYLIDKQKLLANMQKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ FN + + T Sbjct: 64 KLGRQ-KFAGETHAYSVAWADDEIEEMLANCDKIIFNSIGQLQRYTEASAGKVR------ 116 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + P L + I + + + Sbjct: 117 ----------GLRVNPQVSSSDYLLADPARPFSRLGEWDPVKIEQVIEHISGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F ++L + ++ H ++ + +GGG+ H + + + + + Sbjct: 167 NGDFGLFDQMLGTIEERFGHLLHKVEWVSLGGGI----HFTGEGYALDAFCARLKAFSQK 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + L V+ + V+ + +Y Sbjct: 223 YGVQVYLEPGEAAITQSASLEVTVLDTLYNGKHLAVVDSSIEAHMLDLLIY------RLD 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A + G C GD + GD L Y V+ +N Sbjct: 277 AKMAPSEGEHTYMVCGKSCLAGDIFGEYQFDRPLSIGDRLSFIDAAGYTMVKKNWFNGLK 336 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQELIE 412 + ++ ++R + + + Sbjct: 337 MPSIVVKQLDGSVEVVRE-FVYDDYLS 362 >gi|38494225|gb|AAH61550.1| Antizyme inhibitor 1 [Rattus norvegicus] gi|149066491|gb|EDM16364.1| antizyme inhibitor 1, isoform CRA_a [Rattus norvegicus] gi|149066492|gb|EDM16365.1| antizyme inhibitor 1, isoform CRA_a [Rattus norvegicus] Length = 448 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 75/361 (20%), Positives = 120/361 (33%), Gaps = 30/361 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYMVKCNSTPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I+++ K +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIYTSPCKQASQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I KFG + L A L +I GV HI S + + Sbjct: 157 ---------TEDNIGGEDGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHISSACKEYQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +D+GGG L + Sbjct: 207 VYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVIS-PLLDIYFPEGSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT----------------FVILDVAMNDFM 312 +II EPG + V+ L +I+ K + + + D F Sbjct: 266 IQIISEPGSYYVSSAFTLAVNIIAKKVVENDKLSSGVEKNGSDEPAFVYYMNDGVYGSFA 325 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 D D + + GP C+ D I + + GD L + G Sbjct: 326 SKLSEDLNTVPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELSVGDWLIFDNMG 385 Query: 373 A 373 A Sbjct: 386 A 386 >gi|319946804|ref|ZP_08021038.1| carboxynorspermidine decarboxylase [Streptococcus australis ATCC 700641] gi|319746852|gb|EFV99111.1| carboxynorspermidine decarboxylase [Streptococcus australis ATCC 700641] Length = 375 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 76/390 (19%), Positives = 126/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E+N + V A KA S ++ SG Sbjct: 4 EQVPTPSYIIDLGKLEENCRILQEVQEKTGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L S FN E + Sbjct: 64 FYEAKLARE-EFPGEVHVFAPAFKESDMEELLKISDHIVFNS----ERQLRKYGQRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ +I S L V Sbjct: 119 GISVGLRLNPKCSTQGDHALYDPCAPGSRFGVTSDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E+ KA + +Q + H ++ +++GGG I S I Sbjct: 174 QGADDLETTLKAVE------EQFGAYLHQVKWLNMGGGHHITRDDYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + I +EPG + + G L T+V+ I ++ +T V+ A + + + Sbjct: 224 RIRETYNLDIYIEPGEAIALNAGYLATEVLDIVENGIETLVLDASASCHMP--DVLEMPY 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + C TGD I GD LY E Y V++ T Sbjct: 282 RPPLRDGFEAQEKPYTYRLSSNTCLTGDIIGDYSFEKPIEIGDRLYFEDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ + ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDKEGECSLV-KAFGYQDF 370 >gi|163757172|ref|ZP_02164274.1| diaminopimelate decarboxylase [Kordia algicida OT-1] gi|161322900|gb|EDP94247.1| diaminopimelate decarboxylase [Kordia algicida OT-1] Length = 124 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 3/108 (2%) Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 N +RP LY++YH I I NPAG + +VG ICET D NR+I+ R GD+L Sbjct: 3 FNHLIRPMLYNSYHHIENISNPAG--RERYYSVVGYICET-DTFGNNRRISEIREGDILK 59 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDS 415 GAY + YNSR E++ ++ H+IR R TF ++++ Sbjct: 60 FNNAGAYCFSMASNYNSRYRPAEVLWFNNEAHLIRKRETFDDILKNQV 107 >gi|307292863|ref|ZP_07572709.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1] gi|306880929|gb|EFN12145.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1] Length = 390 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 65/391 (16%), Positives = 121/391 (30%), Gaps = 25/391 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + V +P + A+ +N + D V ALKA S ++ +A G+ Sbjct: 17 NRVPSPAFVVDEAAVRRNLSVLRDIGDRAGIKVLGALKAFSMWSLGPVIAEYLDGVCASG 76 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL-NQRAVSLG 141 E R A E + K D ++ S FN + + A G Sbjct: 77 IYEARLAHE-EYRGEIATYCAAYKPEDLAEILKISDHVIFNSPGQIARLRPVIEEARLNG 135 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I R+NP K + + G PI Q+ + + Sbjct: 136 VNFDIGLRINPLHAEGEVPKYDPSQPHSRLGFPIDQLRPEHLEGVD-----------GLH 184 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + F + + ++ + ++ ++ GGG + + + Sbjct: 185 VHNLCEQDFLPLERTWAAIESRVMLHVGGLKWLNFGGGHHVTRADYQIDLLIAFLQRIKA 244 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++ +EPG + D GIL+ +++ I D++ M + Y Sbjct: 245 ----QTGLELYIEPGEAMALDAGILIGEILD-VIDNGMPVAITDISATCHMPDVIEAPYR 299 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 G + GP C GD I R PG + Y V++ T Sbjct: 300 PAMLHEGLEG----QPTRLGGPSCLAGDIIGDYRVPGGATPGRRIAFLDQAHYSMVKTNT 355 Query: 382 YNSRLLIPEIMV--NGSQFHIIRPRMTFQEL 410 +N L + + IR ++++ Sbjct: 356 FNGVPLPSIWLWHSETDELKQIRQ-FSYEDF 385 >gi|167907022|ref|ZP_02494227.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia pseudomallei NCTC 13177] Length = 416 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 34 EALDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 93 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 94 PFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 153 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 154 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 205 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 206 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 260 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 261 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 320 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 321 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 376 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 377 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 406 >gi|332283898|ref|YP_004415809.1| putative carboxynorspermide decarboxylase [Pusillimonas sp. T7-7] gi|330427851|gb|AEC19185.1| putative carboxynorspermide decarboxylase [Pusillimonas sp. T7-7] Length = 368 Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 55/391 (14%), Positives = 108/391 (27%), Gaps = 31/391 (7%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + TP+Y A+++N T V ALK + +V + G S Sbjct: 4 TLPTPYYLIDKPALQRNLDTIDYIRKHSGAKVLLALKCFATWSVFDLMRRHMDGTTSSSL 63 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E++ E +S + ++ FN ++ E + +G + Sbjct: 64 YEVKLGHQ-KFGGETHAYSVAFADHEIEEVVANCDKIIFNSINQLERFAPKAQGKPMGLR 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 P L + +D + Sbjct: 123 LNPGISCA----------------GFDLADPARTYSRLGETDPARILAVVDQLDGVMIHN 166 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + F + LL + Q ++ + +GGG+ ++ Sbjct: 167 NCENSDFARFDDLLTQVEQTYGDILKRLKWVSLGGGISFTAQDYPVDVFCQRL----RRF 222 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG V L V+ + + V+ + +Y + Sbjct: 223 AQEYDVQVYLEPGEAAVRHSTTLEVSVLDVGFNGKHLAVVDSSTEAHMLDLLIYRETAPV 282 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + I G C GD R A + GD + I Y V+ +N Sbjct: 283 GDGIG------EHEYMICGKTCLAGDIFGEGRFAAPLKVGDRISIGDAAGYTMVKKNWFN 336 Query: 384 SRLLIPEIMVN--GSQFHIIRPRMTFQELIE 412 + I + ++R +F + + Sbjct: 337 GVHMPS-IAIKEADGSMRVVRE-FSFDDYVN 365 >gi|221133748|ref|ZP_03560053.1| Carboxynorspermidine decarboxylase [Glaciecola sp. HTCC2999] Length = 378 Score = 126 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 56/389 (14%), Positives = 123/389 (31%), Gaps = 24/389 (6%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 +P Y + N ++ + ALK S + ++ G + E Sbjct: 11 PSPCYVLEEAKLIDNLKLMAHVQAATGVDIILALKGFSMWSCFDLVSKYLQGGTASALWE 70 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + A +++ E+D + ++ S + L + Sbjct: 71 AKL---AKRLGKQVHAFSPAFKTAEMDAIV---NEVDHISFNSLAQYLMHKDTCERGNVS 124 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + RVNP+ + GI A L +SG++ + Sbjct: 125 MGLRVNPEHQEAETPLYDPCAPGSRLGIT----------AVQLQHQDLSGIEGFHIHGLC 174 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + +S+ ++L + QQ + ++ +++GGG + + +Y Sbjct: 175 ECDSYA-TERMLNAIEQQFSAYFPKLKWLNLGGGHLMTQADYDIDHLINVLNRFKAKYPH 233 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 +ILEPG + G L+ +V+ I ++ + + P + + + Sbjct: 234 LH---VILEPGSAVAWQTGPLIAEVVDIVENNGP--IAILDISVTAHMPDVLEMPYRPMI 288 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + L + G C GD + G + E Y V++ +N Sbjct: 289 KDAQEANVLAYTYRLGGNSCLAGDMLPEYSFAEPLAVGQRIVFEDMMHYTMVKTTFFNGV 348 Query: 386 LLIPE-IMVNGSQFHIIRPRMTFQELIEL 413 I+ +F ++R T+ + + Sbjct: 349 QHPGIGILRQNGEFELVRE-FTYDDFLAR 376 >gi|94497589|ref|ZP_01304158.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas sp. SKA58] gi|94423006|gb|EAT08038.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas sp. SKA58] Length = 390 Score = 126 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 68/391 (17%), Positives = 122/391 (31%), Gaps = 27/391 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P + TAI +N + D V ALKA S ++ + G+ Sbjct: 18 RVPSPAFVVDETAIRRNLSILRDIGDRAGIKVLGALKAFSMWSLGPVIGEYLDGVCASGI 77 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL-NQRAVSLGK 142 E R E + K D ++ S FN + A G Sbjct: 78 YEARLGRE-EYRGEVATYCAAYKPDDLAEILRISDHVIFNSPGQIARLKPVIDAARKDGV 136 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I R+NP K + + G P+ Q+ + + Sbjct: 137 NFDIGLRLNPLHAEGEVPKYDPSQPHSRLGFPVDQLRPEHLEGVD-----------GLHI 185 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + + ++ + N++ ++ GGG + D + + Sbjct: 186 HNLCEQDFLPLQRTWTAIESRVMPHVANLKWLNFGGGHHVTRAD----YQIDDLVAFLQT 241 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +EPG + D GILV +++ + + + VA+ D E Sbjct: 242 IKAQTGLDLYIEPGEAMALDAGILVGEILDVIDNG------MPVAITDISATCHMPDVIE 295 Query: 323 INYIVNPAGDRLHIHAD-IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 Y + + + GP C GD I R PG + Y V++ T Sbjct: 296 APYRPAMLHEDSNGPVTRLGGPSCLAGDIIGDYRVPGGAEPGARIAFLDQAHYSMVKTNT 355 Query: 382 YNSRLLIPEIMVNGSQFHI--IRPRMTFQEL 410 +N L + N + IR ++ + Sbjct: 356 FNGVPLPSIWLWNSDTDELKEIRS-FSYADF 385 >gi|167724092|ref|ZP_02407328.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei DM98] Length = 419 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 56/395 (14%), Positives = 115/395 (29%), Gaps = 18/395 (4%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L+ L + TP + Y + + + Y LK S+ ++ + G Sbjct: 33 LDAL-DALDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDG 91 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 S E + A + + ++ + + Y + + A Sbjct: 92 FAASSPFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALA 151 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 L I + + +A K + + S L G+ Sbjct: 152 GRLSCGLRINPQYSVVADARYDPCRPHSKLGVPLDVIERVVASDPRALHGLQGIHFH--- 208 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 F + + + L ++L + I++GGG + Sbjct: 209 -----TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFR 258 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + + + + +EPG +V G ++ V+ + S +LD +N + Y Sbjct: 259 ACAKRLREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEY 318 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + V+ + G C GD R A R G + GAY V Sbjct: 319 QFQPD----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLV 374 Query: 378 QSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 ++ +N L R ++++ + Sbjct: 375 KAHRFNGINLPSVYRRGEDGALAAVQRFSYEDFLR 409 >gi|327285434|ref|XP_003227438.1| PREDICTED: arginine decarboxylase-like [Anolis carolinensis] Length = 463 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 78/374 (20%), Positives = 132/374 (35%), Gaps = 34/374 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF+ + K +L A + YALK N ++ V++TLA LG+G ++ E+ Sbjct: 38 PFFVADLEEVVKKHLRLLKALPRIKP--FYALKCNRSKGVVQTLAGLGAGFSCANKTEMA 95 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + VPAERI+ + K + I A G+ ++E EL + + S +A Sbjct: 96 LVKSVGVPAERIICASPCKQLSLIKYAASQGVQLMTFDNEVELGKVARSHPSARMLLCLA 155 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S+ KFG + L A + ++ G+ H+GS Sbjct: 156 ----------TDDSRSSTHLSIKFGATLKTCRHLLETAKEMKV-EVVGISFHLGSSCPDP 204 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFG 265 + F ++ R + + G+ + +D+GGG S R +S + + Sbjct: 205 QIFTQSIADARLVFEMGAEVGYKMHLLDIGGGFPAFEESRGRFEETSAVVNSALDLYFPE 264 Query: 266 NLQCKIILEPGRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMND 310 +I+ E GR+ V L + + + D Sbjct: 265 GCGVEIMAELGRYYVDSAFTLAVNIVAKKEVTLDQVSSEDEDPGGKKSFVYHLNDGVYGS 324 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 F +A P+ D+ + GP + D +A + GD L E Sbjct: 325 FGSVIFNNACPIPILHQKPSPDQRLHSSSFWGPTGDGLDRLAEGVDLPELHVGDWLVFEN 384 Query: 371 TGAY----GAVQSG 380 GAY A S Sbjct: 385 MGAYAVPPSASLSS 398 >gi|218134059|ref|ZP_03462863.1| hypothetical protein BACPEC_01949 [Bacteroides pectinophilus ATCC 43243] gi|217991434|gb|EEC57440.1| hypothetical protein BACPEC_01949 [Bacteroides pectinophilus ATCC 43243] Length = 416 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 88/415 (21%), Positives = 153/415 (36%), Gaps = 48/415 (11%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L+ +AH TP Y ++ +E T G V YA+KAN ++ ++ LG Sbjct: 6 LKNIAHTYGTPSYIFNVDELESRLNTIKQIL-GEGIDVLYAMKANP--FLVPVMSRLGMR 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL--QSGIYCFNVESESELKTLNQ 135 ++ S GE V + IV SGV K +I+ + G+ + VES + L Sbjct: 63 FEVCSPGEFAICENEHVNMQDIVLSGVNKERADIEHVMDDCGGVGIYTVESVRHFQLLAS 122 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A + RV ++FG+ I ++ + V I G Sbjct: 123 MAEKRSTVIHVLLRV---------------TSGNQFGLDEEDIENIISKRDEFKYVDIRG 167 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + G+Q + + K L L + G+ + + G GL ++Y ++ Sbjct: 168 IQCYTGTQKKKSDHIDKEIDWLDSLCDRLYEKYGYKAEEFEYGPGLFVSYFEPGVDNNNY 227 Query: 255 DY--ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 D A + I LE GR++ A G+ +T+V IK + ++ + I+D +N Sbjct: 228 DMLRALAAKLDTIRDKYHISLEMGRYIAATCGLFLTRVEDIKYNKEQHYCIVDGGINHIN 287 Query: 313 RPTLYDAYHEINYIVNPAG-----------------------DRLHIHADIVGPICETGD 349 A P +H ++ G +C GD Sbjct: 288 YYGQTMAMKLPVTEHIPMDVDASKTFAMSDACALLGNELVQKSEGTVHWNVCGSLCTVGD 347 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMV-NGSQFHIIR 402 I N ++ + GD+L GAY + + SR L I + + ++R Sbjct: 348 VIVKNLELTDLKIGDMLVFHNIGAYSVTEGIYLFLSRNLPNIIEYSSKNGARLLR 402 >gi|332185694|ref|ZP_08387441.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Sphingomonas sp. S17] gi|332014052|gb|EGI56110.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Sphingomonas sp. S17] Length = 404 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 97/401 (24%), Positives = 157/401 (39%), Gaps = 19/401 (4%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F G+L S E P + Y + F AF +D + YA+KAN Sbjct: 10 EFATQHGALMIGGRSAEDWMQGRDGPLFVYDPAIVAARVARFRAAFPTID--LHYAIKAN 67 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 ++ +A L G D+ S GEL + + P + F+G GK E+ A+ +GI Sbjct: 68 PFPPLLAAMAGLVDGFDVASSGELAKVVELGKP---VSFAGPGKRDAELAAAIDAGIT-L 123 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 N+ESE E A LG+ +A RVNPD+ G+ FGI ++ +L Sbjct: 124 NLESEGEATRGLAIAERLGRTPRLAVRVNPDVELRGSGMKMGGRPS-PFGIDAARVPALV 182 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFK-LLRDLTQQLRSNGHNIQHIDVGGGLG 241 + G ++ GSQ ++ + + GH +++GGG G Sbjct: 183 RTIVASGA-EWRGFHIYAGSQALDPQAIIDTQAATIALAARLAEEAGHTPPLVNLGGGFG 241 Query: 242 IAYHSDHRPPSSSDYASLIHQY-----FGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 + Y + + + + Q + +E GR+LVA+ G+ + V+ IK S Sbjct: 242 VPYFAGDQSLDIEQVGTALTQALEARPDILRDTRFAIELGRWLVAEAGVYMAHVVDIKDS 301 Query: 297 ADKTFVILDVAMNDF----MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + F ILD +N + + + G +VGP+C D + Sbjct: 302 GGERFAILDGGLNHQLAASGNFGTVVRRNYPLALAHAMGAEAIQTVSVVGPLCTPLDRLG 361 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIM 392 + GD++ I GAYGA S + EI+ Sbjct: 362 DRVALPAVHVGDIVAIFLAGAYGASASPSAFLGHGPADEIL 402 >gi|218130916|ref|ZP_03459720.1| hypothetical protein BACEGG_02511 [Bacteroides eggerthii DSM 20697] gi|217987260|gb|EEC53591.1| hypothetical protein BACEGG_02511 [Bacteroides eggerthii DSM 20697] Length = 381 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 59/386 (15%), Positives = 122/386 (31%), Gaps = 20/386 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 +P Y + KN + D + A K+ + S Sbjct: 9 FPSPCYIMEEELLRKNLELIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVY 68 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R A + T ++ S ++ + + G+ Sbjct: 69 EARLA--LEEFGSKAHTYSPAYTEAGFPEIMRC-SSHITFNSLAQFRRFYPMIQADGQGI 125 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 RVNP+ + + + +FG+ A L V G+D Sbjct: 126 SCGIRVNPEYSEVETELYNPCAPGTRFGV----------MAEQLSDVLPQGIDGF-HCHC 174 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 S ++ + L L + ++ +++GGG + L +Y Sbjct: 175 HCESSSYELERTLEHLEAKFSRWFPQLKWLNLGGGHLMTRKDYDVEHLIRLLRGLKERYP 234 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +IILEPG G+L ++V+ + ++ IL+V+ M L Y + Sbjct: 235 HL---RIILEPGSAFTWQTGVLTSEVVDLVENRGIRTAILNVSFTCHMPDCLEMPYQPVV 291 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 D ++ + G C +GD++ + + G+ + E Y V++ +N Sbjct: 292 RGAEMGNDGPYV-YRLGGNSCLSGDYMGMWSFDHELQIGERIIFEDMIHYTMVKTNMFNG 350 Query: 385 RLLIPEIMV-NGSQFHIIRPRMTFQE 409 M + + + ++++ Sbjct: 351 IHHPTIAMWTKEGKADLFKQ-FSYED 375 >gi|114568928|ref|YP_755608.1| ornithine decarboxylase [Maricaulis maris MCS10] gi|114339390|gb|ABI64670.1| Ornithine decarboxylase [Maricaulis maris MCS10] Length = 417 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 68/378 (17%), Positives = 117/378 (30%), Gaps = 17/378 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL-DIV 81 V++P C + + F + F G V YA+KAN +++ L G+ D+ Sbjct: 14 RHVESPVVCVRPDRVAEAGRWFQDNFPG---EVLYAVKANPAPWILQALHKAGTRFFDVA 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E++ + V + G+ F ++ E+EL + + Sbjct: 71 SIPEIQLVAEHCPDSRMAFLHPVKSRESIRRAYYEFGVRIFALDCEAELAKILEETNHAD 130 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + A KFG P ++ L A GV H+G Sbjct: 131 DVTLVVRLAVSNDGA-------MFSLAGKFGAPAYEAAELIRTARAHAFE--LGVSFHVG 181 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 SQ Q ++ A L Q + + + Sbjct: 182 SQCMQPSAYRSAMLEASRLIAQAGVTVDIVDVGGGFPSIYPGMQPPPMDDYVAAIEDAFE 241 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA-- 319 + + EPGR LVA+ ++T+V K A + D Sbjct: 242 EMMVLENADLWCEPGRALVAEAESVLTRVELRKGDALYLNDGAYGRLFDAAHAKWPFPVR 301 Query: 320 -YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAV 377 + + GP C++ D I ++ R GD++ I GAYG Sbjct: 302 LHRRRSTGPRDESSEQTASFRFFGPTCDSLDAIPGPFELPADIREGDVIEIGMLGAYGTA 361 Query: 378 QSGTYNSRLLIPEIMVNG 395 + +N I + V Sbjct: 362 LATDFNGFGTIERVAVED 379 >gi|330504767|ref|YP_004381636.1| carboxynorspermidine decarboxylase [Pseudomonas mendocina NK-01] gi|328919053|gb|AEB59884.1| carboxynorspermidine decarboxylase [Pseudomonas mendocina NK-01] Length = 365 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 49/388 (12%), Positives = 102/388 (26%), Gaps = 29/388 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y + N + + ALK + +V + G S E Sbjct: 3 QTPYYLIDKQKLLVNLEKIAYVRENSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLYE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L+ E +S + ++ FN + E Sbjct: 63 LKLGRQ-KFAGETHAYSVAWADDEIEEMVANCDKIIFNSIGQLERFAA------------ 109 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + P L + + + + Sbjct: 110 ----RTEGTIRGLRVNPQVSSSDYLLADPARPFSRLGEWDPAKIEQVMGQISGFMFHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + SF K+L + ++ ++ + +GGG+ H + + + + Sbjct: 166 ENGSFELFDKMLTTIEERFGHLIAQVEWVSLGGGI----HFTGEGYPIDAFCARLKAFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + V+ + +Y Sbjct: 222 KYGVQVYLEPGEAAITLSASLEVTVLDTLYNGKHLAVVDSSIEAHMLDLLIY------RL 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD + + GD L Y V+ +N Sbjct: 276 NAKMAPNDGEHTYMVCGKSCLAGDIFGEYQFDKPLQIGDRLSFVDAAGYTMVKKNWFNGL 335 Query: 386 LLIPEIMVN-GSQFHIIRPRMTFQELIE 412 + ++ ++R F + + Sbjct: 336 KMPSIVVKQLDGSVEVVRQFE-FDDYLS 362 >gi|153007782|ref|YP_001368997.1| carboxynorspermidine decarboxylase [Ochrobactrum anthropi ATCC 49188] gi|151559670|gb|ABS13168.1| carboxynorspermidine decarboxylase [Ochrobactrum anthropi ATCC 49188] Length = 389 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 116/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T +++N + + ALK + +V ++ G S E Sbjct: 27 QTPYYLIDKTKLKRNMEKVAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSLNE 86 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 87 VRLGHE-RFGGETHAYSVAYADNEIDEVISHADKIIFNSIGQLERF------ADKAAHIK 139 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP ++++T P L + + V + Sbjct: 140 RGLRLNPGVSSSTFD----------LADPARPFSRLGEWDVAKVEKVMDRVTGFMIHNNC 189 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F K+L D+ ++ S H ++ + +GGG+ H D+ + + + Sbjct: 190 ENSDFGLFDKMLTDIEEKFGSLLHRVEWVSLGGGI----HFTGDDYPVDDFCARLKAFSE 245 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 246 KFGVQVYLEPGEASITKTTTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIY------RE 299 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD GD L E Y V+ +N Sbjct: 300 KAKMAPNNGEHSYMVCGKSCLAGDIFGEFTFDKELSIGDRLSFEDAAGYTMVKKNWFNGV 359 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V I+R + + Sbjct: 360 KMPA-IAVRELDGTVKIVRE-FDYADF 384 >gi|146306022|ref|YP_001186487.1| carboxynorspermidine decarboxylase [Pseudomonas mendocina ymp] gi|145574223|gb|ABP83755.1| carboxynorspermidine decarboxylase [Pseudomonas mendocina ymp] Length = 365 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 49/388 (12%), Positives = 102/388 (26%), Gaps = 29/388 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y + N + + ALK + +V + G S E Sbjct: 3 QTPYYLIDKQKLLVNLEKIAYVRENSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLYE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L+ E +S + ++ FN + E Sbjct: 63 LKLGRQ-KFAGETHAYSVAWADDEIEEMVANCDKIIFNSIGQLERF-------------- 107 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + P L + + + + Sbjct: 108 --AERTEGTIRGLRVNPQVSSSDYLLADPARPFSRLGEWDPEKIAKVMGQISGFMFHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + SF K+L + ++ ++ + +GGG+ H + + + + Sbjct: 166 ENGSFELFDKMLSTIEERFGHLIAQVEWVSLGGGI----HFTGEGYPIDAFCARLKAFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + V+ + +Y Sbjct: 222 KYGVQVYLEPGEAAITLSASLEVTVLDTLYNGKNLAVVDSSIEAHMLDLLIY------RL 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD + + GD L Y V+ +N Sbjct: 276 NAKMAPNDGEHTYMVCGKSCLAGDIFGEYQFDKPLKIGDRLSFIDAAGYTMVKKNWFNGL 335 Query: 386 LLIPEIMVN-GSQFHIIRPRMTFQELIE 412 + ++ ++R F + + Sbjct: 336 KMPSIVVKQLDGSIEVVRQFE-FDDYLS 362 >gi|291408851|ref|XP_002720748.1| PREDICTED: ODC antizyme inhibitor-2 [Oryctolagus cuniculus] Length = 460 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 70/369 (18%), Positives = 127/369 (34%), Gaps = 30/369 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ A+ + +L F Y ++ NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAVVRKHLCFLKCLPR--VRPFYVVRCNSSPGVLKVLAELGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP +I+++ K I +I A + G+ + ++E EL + + S +A Sbjct: 99 VQHIGVPTSKIIYANPCKQIAQIKYAAKHGVRLLSFDNEMELAKVAKSHPSTKLVLCVA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T ST KFG ++ L A V++ GV HI S Sbjct: 158 ---------TDDSYSTSHLSLKFGAALNSCRHLLENAKKS-HVEVVGVSFHISSGCPDPR 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADARLVFEMGSELGHRMHILDLGGGFPGIEGAKVRFEEVASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 I+ E GR+ V + +I+ K + + + F Sbjct: 268 CGVDILAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTPKTIMYHLAEGVYGIF 327 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 P+ ++ + + GP E D +A + GD L + Sbjct: 328 NSVLFDSVCPTPILQKKPSAEQPLYSSSLWGPTAEGCDCVAEGLWLPQLHVGDWLVFDNM 387 Query: 372 GAYGAVQSG 380 GAY Sbjct: 388 GAYTIGTGS 396 >gi|312377940|gb|EFR24646.1| hypothetical protein AND_10628 [Anopheles darlingi] Length = 397 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 71/377 (18%), Positives = 114/377 (30%), Gaps = 36/377 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P I +NY ++ G + YA N++ V+ +A LG G SE E+ Sbjct: 28 PINLLDLDRIVQNYQRWTEQQHGTGLLPYYAPSVNNHPTVLALMARLGVGFSCASEEEMC 87 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 AL+ VP RI F KT++ I A Q I V+SE+E+ + + I Sbjct: 88 TALSLGVPPGRIRFVHPVKTVESILFAKQHHIKRLVVDSETEIDKVYRHYPDGQLLLRIR 147 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 P + A+A Q+ Sbjct: 148 LSREQKYGC----------------CPRGDAPGILAHAKANGIQVAGLYVAIPAPNQHQV 191 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 E+ + + + + +Q + G G S AS I Sbjct: 192 EALQRGLEQAKAVYEQACALGLTDIRELAIAGAETIPSSA--------LASAIANLELPA 243 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI- 326 ++E R V LVT V S + D + + F+ Y ++ Sbjct: 244 TISCVIETERQFVESAVTLVTSVQSKRIVRDPDQPEVIREIMYFINDGRYGSFEWWTTPV 303 Query: 327 -----------VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + + GP C++ D + + GD L GAYG Sbjct: 304 TKEPTVYRTNGARQPLPAQVWPSSVWGPTCDSADVVFEKVNLPELDIGDFLVFADVGAYG 363 Query: 376 AVQSGTYNSRLLIPEIM 392 + +N L I Sbjct: 364 GTLASQFNGCPLPRMIA 380 >gi|89067260|ref|ZP_01154773.1| hypothetical protein OG2516_10486 [Oceanicola granulosus HTCC2516] gi|89046829|gb|EAR52883.1| hypothetical protein OG2516_10486 [Oceanicola granulosus HTCC2516] Length = 365 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 111/386 (28%), Gaps = 31/386 (8%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y A+ N + + ALK + +V ++ G S E+ Sbjct: 4 TPYYLIDKQALLPNLEKIARLRELSGCKCLLALKCFAAWSVFDLMSEYMDGTTSSSPFEV 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + P E +S D +++ S FN + E G + Sbjct: 64 KLGRK-HFPGETHAYSVAWDEADLLEVLANSDKIIFNTIGQLERFGEAASDHVRGLRVNP 122 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 P L + G V + + Sbjct: 123 GISS----------------SSFDIADPARPFSRLGEHDPERIGAVCDRVSGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + F + +L + ++ ++ + +GGG+ H A + ++ Sbjct: 167 NDDFDRFDAMLTQIEERFGHLISRMEWVSLGGGI----HFTGEGYPLEKLAERLRRFSET 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + D L V+ + K V+ + +Y Sbjct: 223 YGVQVYLEPGEAAITDSTTLELTVLDTLDNGKKLAVVDSSIEAHMLDLLIY------REQ 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A D + G C GD R +PGD + I G Y V+ +N Sbjct: 277 AKVAPDTGDHEWMVCGNSCLAGDIFGEFRFERPLKPGDRVSIRDAGGYTMVKKNWFNGVR 336 Query: 387 LIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V +R ++ + Sbjct: 337 MPA-IAVRELDGTVRTVRE-FSYSDF 360 >gi|331697150|ref|YP_004333389.1| Ornithine decarboxylase [Pseudonocardia dioxanivorans CB1190] gi|326951839|gb|AEA25536.1| Ornithine decarboxylase [Pseudonocardia dioxanivorans CB1190] Length = 374 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 85/370 (22%), Positives = 140/370 (37%), Gaps = 23/370 (6%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP+ + + + AF G V YA+KA + AV++TL G+G D S E Sbjct: 15 PTPYLVLDPAVVARRHADVVAAFPG--AEVLYAVKACPHPAVLRTLVAAGAGFDAASPAE 72 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + LAA RI + A ++G+ F +S +L L A Sbjct: 73 VDLCLAAGADPARIGLGNPVRGAAATAAAHRAGVRRFVTDSVEDLDELAA----HAPGAA 128 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R+ D + + + + A G+ +GV H GSQ Sbjct: 129 VLVRLLVDDSGSATPFFGKFGATPQVATDLL-------RACASRGLVAAGVTFHAGSQQT 181 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + ++ + + +DVGGGL +AY +D PS +++A+ I G Sbjct: 182 RPTTYAAGVAAALAVARDAGLQHP---VLDVGGGLPVAYRAD--VPSFTEFAAAIGGVDG 236 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 +++LEPGR LVA+ G+L T V+ + + + I Y Sbjct: 237 IDAAQLVLEPGRALVAEAGVLRTSVLRVSRRPGVDHRRWVYLDAGRYQGLAETENEAIGY 296 Query: 326 IVNPAG-DRLHIHADIVGPICETGDFIALN--RKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 + G D + GP C+ D + + L R GD + + GAY A + Sbjct: 297 PLRVPGRDGPCGPVVLAGPTCDGDDVLYRRTPYALPLSLRAGDHVDLLHAGAYTASYASV 356 Query: 382 -YNSRLLIPE 390 +N +P Sbjct: 357 GFNGFGPLPV 366 >gi|152993160|ref|YP_001358881.1| carboxynorspermidine decarboxylase [Sulfurovum sp. NBC37-1] gi|151425021|dbj|BAF72524.1| carboxynorspermidine decarboxylase [Sulfurovum sp. NBC37-1] Length = 379 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 51/384 (13%), Positives = 111/384 (28%), Gaps = 23/384 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + +P + + N + + + ALK + + G Sbjct: 6 IKKIPSPCWLLKEKKLVNNLELLQSIKEKSGAKILLALKGYALWKSFPLIRQYLDGCCAS 65 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E A + V + ++ + S S ++ K +A Sbjct: 66 GLHEAML---AQEEFGKEVHTYAPAFKEKEIDKIASLSQHLVFNSPAQFKRFAAQARETN 122 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP+ + + + + + G I + + Sbjct: 123 PSLSLGLRINPEYSESPKEIYNPCGLYSRLGTTKENFDES-----------IVEICDGLH 171 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + K+L+ + ++ I+ GGG +H + +LI Sbjct: 172 FHALCEQDSSSLEKVLQHFETNFGAYIPKMKWINFGGG----HHITRKGYDIERLVTLIR 227 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ LEPG + + G L+ V+ I + ++ A + Sbjct: 228 DFKARYDVEVYLEPGEAVAWETGPLIATVLDIVHNGIDIAILDTSAETHMP--DTIIMPY 285 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + G C GD + A + GD ++ E Y V++ T Sbjct: 286 RAEVRGAGKVGEKKHTYRLAGNTCLAGDIMGDYSFDAPLKIGDRVFFEDQMHYTMVKATT 345 Query: 382 YNSRLLIPEIMVN--GSQFHIIRP 403 +N L I + + ++R Sbjct: 346 FNGIKLPA-IAIERLDGEIEVVRE 368 >gi|33322394|gb|AAQ06922.1|AF496253_1 diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp. lactis] Length = 119 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 35/82 (42%) Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 ++ G CE+GD + + + PGD++ + TGAYG + YN + Sbjct: 33 EDEERVNLXGKYCESGDILIKSCPLPKTEPGDVVALLSTGAYGYSMASNYNRNPRPAVVF 92 Query: 393 VNGSQFHIIRPRMTFQELIELD 414 ++ R ++ +LI D Sbjct: 93 AEDGVDQLVIKRESYDDLIAND 114 >gi|73974239|ref|XP_858736.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 10 [Canis familiaris] Length = 449 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 75/381 (19%), Positives = 124/381 (32%), Gaps = 32/381 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQIKP--FYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKIGVNTMTCDNEVELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +D+GGG L + Sbjct: 207 VYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVIS-PLLDVYFPEGSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH------- 321 KII EPG + V+ L +I+ K + K P + Sbjct: 266 IKIISEPGSYYVSSAFTLAVNIIAKKVAFQKCHTNSYPKKTGSDEPAFMYYMNDGIYGSF 325 Query: 322 -----------EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + + D + + GP C+ D I + + GD L + Sbjct: 326 ASKLSEDLNTIPEVHKASCKKDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDN 385 Query: 371 TGAYGAVQSGTYNSRLLIPEI 391 GA + +N Sbjct: 386 MGADSLHEPSAFNDFQRPAIY 406 >gi|291531604|emb|CBK97189.1| carboxynorspermidine decarboxylase [Eubacterium siraeum 70/3] Length = 392 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 70/396 (17%), Positives = 118/396 (29%), Gaps = 22/396 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + V TP Y + +N + D + A KA S + ++ SG Sbjct: 8 INKVDTPCYVTEECYLRRNCEILKSVQDMTGCKILLAQKAFSMYSTYPLISGYLSGTTAS 67 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E R E VFS + +LA +G + FN + L + Sbjct: 68 GLYEARLGYEYFGN-ETHVFSPAYTDKEINELAKYAGHFVFNSIRQFALHRDAVKDKHCL 126 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + F H+ + G + +I G+ H Sbjct: 127 IRVNPRFSTQ-----EGHEIYDPCAPGSRLGQTLASFEEDIKRYGEEILDEIDGLHFHTL 181 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + + A ++ Q + I+ GGG I +I+ Sbjct: 182 CEQNSDDLMRTAKEVEV----QFGKYLDKMSVINFGGGHHITRDD----YDIDTLVEVIN 233 Query: 262 QYFGNLQCKIILEPGRFLVADVGI---LVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + ++ LEPG + + G V VI K + + ILD + M L Sbjct: 234 HFKNEYGLEVYLEPGEAVALNAGFLVTTVLDVIDGKINGEDDIAILDASAACHMPDVLEM 293 Query: 319 AYHEINYIVNPAGDRLH----IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 Y + N + + G C GD I +PGD L + Y Sbjct: 294 PYRPVIIQPNGNIAGEKGERAVTVRLGGNTCLAGDVIGDYSFDEPLKPGDRLVLCDMSIY 353 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 V++ T+N L IR ++ + Sbjct: 354 SMVKNNTFNGMALPSIYYNTSLGMRKIRE-FSYDDF 388 >gi|291527362|emb|CBK92948.1| Diaminopimelate decarboxylase [Eubacterium rectale M104/1] Length = 400 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 76/382 (19%), Positives = 140/382 (36%), Gaps = 19/382 (4%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTM---VCYALKANSNQAVIKTLAHLGSGLDIVS 82 QTP+Y + T K A D +C+++KAN ++ L +++ S Sbjct: 3 QTPYYVFDTDEFAKRAAMIRAALDCKGGRRIPLCFSIKANP--FLLHRLPEGLDHVEVCS 60 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GEL +A V E I++SGV K +I+ A+ G ES +++ + Sbjct: 61 PGELEICIALGVKPESIIYSGVMKEKCDIERAVSYGAGILTCESIRHAALISEVMLERMP 120 Query: 143 KAPIAFRVNPDINANTHKKISTG-KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + A T + ++FG+ + I + ++ G+ + G+ + G Sbjct: 121 E-----GAHEAEFAETKTHVILRLTSGNQFGMSLDDIEYIISHPDEFKGIAVMGIHYYSG 175 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 +Q + K+ L+ Q ++ G GL + Y D Sbjct: 176 TQKSLRKINKDLEKIKSALSVLKEKYSFEPQLVEYGPGLCVEYFEDDWQEREKRSLDEAA 235 Query: 262 Q--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + ++ + +E GRFL A G T+V +K + D + ILD ++ A Sbjct: 236 EVLREFAVEYPLGIEMGRFLAASCGKYYTQVKDLKSTGDANYAILDGGIHHLNYFGQRMA 295 Query: 320 YHEINYIVNPAG-----DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + A + + G +C D + K+ GD+L GAY Sbjct: 296 MQVPPISIYRAAGVELTELPDTDYTLCGSLCTVADVLVREVKLKKLELGDVLEFGHCGAY 355 Query: 375 GAVQSGT-YNSRLLIPEIMVNG 395 ++ + SR L + Sbjct: 356 SVTEAPALFLSRQLPAIYAYSK 377 >gi|262277735|ref|ZP_06055528.1| lysine/ornithine decarboxylase [alpha proteobacterium HIMB114] gi|262224838|gb|EEY75297.1| lysine/ornithine decarboxylase [alpha proteobacterium HIMB114] Length = 394 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 83/375 (22%), Positives = 144/375 (38%), Gaps = 24/375 (6%) Query: 18 LEKLAHVVQ--TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 +++L +Q P YC+ +++ + F+N F G V YA+K N +AV+KTL G Sbjct: 7 VDELVKALQPIDPVYCFRKHSLKLSADWFNNNFPG---DVLYAVKCNPTEAVVKTLIKNG 63 Query: 76 S-GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 D S E++ ++ V K + G+ ++ +S+ EL + Sbjct: 64 IKNFDAASIDEIKLIKKLSPKSKIYFMHTVKKESSIKEAYFYHGVKAYSFDSKEELDKIL 123 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + + + T + S KFG I++ SL A K Sbjct: 124 KVTNNAK-------DLELFLRIQTSNEHSEIDLSKKFGASINEAVSLSKIAKV--KSKKF 174 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G H+GSQ ++ KA K DL ++ + I+VGGG Y + P + Sbjct: 175 GFSFHVGSQCMHPIAYSKAIK---DLGNIIKKSNIIPDIINVGGGFPTTYPDLYPQPIQN 231 Query: 255 DYASLI---HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + ++ K+I EPGR LVA+ G + +V KK ++ D Sbjct: 232 YFQEITQALNKLNLTKTPKLICEPGRALVAESGSTIVRVELKKKQHLYINDGTYGSLFDA 291 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEK 370 P + + + + GP C+ D++ + GD + I + Sbjct: 292 GTPRF--IFPTKAIQIENTPSKRLVPYSFYGPTCDGLDYMKGPFMLPSNINSGDYIEIGQ 349 Query: 371 TGAYGAVQSGTYNSR 385 GAYG +N Sbjct: 350 LGAYGMSLRTNFNGF 364 >gi|257469983|ref|ZP_05634075.1| putative pyridoxal-dependent decarboxylase [Fusobacterium ulcerans ATCC 49185] gi|317064209|ref|ZP_07928694.1| orn/DAP/Arg decarboxylase 2 [Fusobacterium ulcerans ATCC 49185] gi|313689885|gb|EFS26720.1| orn/DAP/Arg decarboxylase 2 [Fusobacterium ulcerans ATCC 49185] Length = 403 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 88/375 (23%), Positives = 154/375 (41%), Gaps = 32/375 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y+ I G Y++K N +I+ ++ G G D S GE+ Sbjct: 12 PCYIYNGEQIASQCQKLKRELSG--FEFLYSIKTNPFSHIIQNISKEGFGADAASAGEVF 69 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 +L + E+I +S GKT + I++ G +S SE++ +N A + I Sbjct: 70 LSLKNGIAPEKIFYSAPGKTEEAIEICY--GKCTIIADSISEIRHINAIAAKHKEIVKIG 127 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 VN + + + KFGI I Q+ + + +KI+G+ +HI SQI Sbjct: 128 ISVNSNFS-----MKNECGTSSKFGIDIEQLLKVEDTLAEYSNIKITGIHIHIQSQILDF 182 Query: 208 ESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP-----PSSSDYASLIH 261 + K +K +L ++ NI+ I+ G G+G Y + + + Sbjct: 183 QILGKYYKNCFELAKKIHSMKNVNIEFINFGSGIGALYRETQDKSVDLEKLNKMISEIAE 242 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY---- 317 + L K+++E GRF+ + G T ++ IK+S + ++I++ AMN FMRP + Sbjct: 243 ENHAVLNAKLLIETGRFITCNAGKYYTPIVDIKESLGQKYLIVENAMNGFMRPAIANLIY 302 Query: 318 -------------DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 + + +IVG +C D I N ++ + GD Sbjct: 303 KAAGEILTGYEPLYTCQDEFSVQVLNESVEKEKVNIVGNLCTALDVIRENAEVNHAQIGD 362 Query: 365 LLYIEKTGAYGAVQS 379 ++ I G+Y S Sbjct: 363 IIEITNAGSYAYSLS 377 >gi|118793145|ref|XP_320707.3| AGAP011808-PA [Anopheles gambiae str. PEST] gi|116117238|gb|EAA00694.3| AGAP011808-PA [Anopheles gambiae str. PEST] Length = 405 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 74/362 (20%), Positives = 123/362 (33%), Gaps = 23/362 (6%) Query: 21 LAHVVQT---PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 +A V T P + I + + + YA+K NS+ +++ LA LG G Sbjct: 21 IAKRVTTVGEPLNVLNLDDIVAKHRNWQAKLPTVAP--FYAVKCNSHPTILRLLAALGCG 78 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D S EL L V +RIV++ K+I I A + G+ + EL+ L + Sbjct: 79 FDCASRAELDSVLELGVTPDRIVYAHPNKSIGSIVHAKKLGVKRMTFDGSDELEKLARHY 138 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + KFG + + G+ + GV Sbjct: 139 PEAELILRVR----------HDAAAAQLSLGRKFGCDQVRDARPLLERARELGLSVIGVS 188 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 H+GS E F+ + ++ + + G ++ +DVGGG A + + Y Sbjct: 189 FHVGSGSMDAECFYGGIRKAIEIFRVGSTLGMKMELLDVGGGYPGANGALFD--RCAYYI 246 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT----FVILDVAMNDFMR 313 + + +I EPG++ V + V+S D V V + Sbjct: 247 NKALKELVPTPVAVIAEPGKYYVESAVTALVNVVSKSYEKDVDGAVVRVRYYVDDGLYDT 306 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPI-CETGDFIALNRKIALPRPGDLLYIEKTG 372 D + + + I G CE D I + GD L G Sbjct: 307 FDWCDDQGSGPLLQEDKRGAPCVRSVIYGRTMCE-HDVIREEISLPEHEIGDCLVFPNRG 365 Query: 373 AY 374 AY Sbjct: 366 AY 367 >gi|307718013|ref|YP_003873545.1| carboxynorspermidine decarboxylase [Spirochaeta thermophila DSM 6192] gi|306531738|gb|ADN01272.1| carboxynorspermidine decarboxylase [Spirochaeta thermophila DSM 6192] Length = 385 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 62/391 (15%), Positives = 115/391 (29%), Gaps = 25/391 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V +P + A+E+N V ALK + ++ ++ SG Sbjct: 12 QAVPSPCFVVDRDAVEENLKILDRVQREGGARVLLALKGFAMWSLAPLVSSYLSGTCASG 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + K + +L + FN S+ E + Sbjct: 72 VWEARLGRECFG-GIVSTYGPAYKEDEVRELLTLTDHLIFNSFSQWERFGPLVGSAPRRV 130 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 +A I +S + ++ + Sbjct: 131 EAGIRVNPERSGAPAAI-------------YDPSGPNSRLGVVRSRFRPELLDGISGLHF 177 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ +L+ ++ ++ ++ GGG I L+ Sbjct: 178 HTLCEQNVDALEAVLQAFEERFGEFVPRMRWVNWGGGHHITRPD----YDVDRLIDLVRD 233 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + LEPG + G+LV +V+ I +LD + M L Y Sbjct: 234 FRSRYGVDVYLEPGEAIALGTGVLVAEVVDIV-ENGMRIAVLDTSATTHMPDVLEMPYRP 292 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + G+R + G C GD I GD L + Y V++ T+ Sbjct: 293 EVWGAGLPGERP-YTYRLGGISCLAGDVIGDYSFDRPLEVGDRLVFDDMAHYTMVKTTTF 351 Query: 383 NSRLLIPEIMVNGSQ---FHIIRPRMTFQEL 410 N L I + S+ F ++R ++E Sbjct: 352 NGVKLPS-IGIWSSKEQSFTLVRSFE-YEEF 380 >gi|315185867|gb|EFU19632.1| carboxynorspermidine decarboxylase [Spirochaeta thermophila DSM 6578] Length = 385 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 59/389 (15%), Positives = 110/389 (28%), Gaps = 21/389 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V +P + A+E+N V ALK + ++ ++ SG Sbjct: 12 QAVPSPCFVVDRDAVEENLKILDRVQRESGARVLLALKGFAMWSLAPLVSSYLSGTCASG 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R + K + +L + FN ++ E Sbjct: 72 VWEARLGRECFG-GIVSTYGPAYKEEEVRELLTLTDHLIFNSFAQWERFRSLLGTAPRRV 130 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 +A I +S + ++ + Sbjct: 131 EAGIRVNPERSGAPAAI-------------YDPSGPNSRLGVVRSRFRPELLDGISGLHF 177 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ +L+ ++ ++ ++ GGG I L+ Sbjct: 178 HTLCEQNVDALETVLQAFEERFGEFVPRMRWVNWGGGHHITRPD----YDVDRLIDLVKD 233 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + LEPG + G+LV +V+ I +LD + M L Y Sbjct: 234 FRSRYGVDVYLEPGEAIALGTGVLVAEVVDIV-ENGMRIAVLDTSATTHMPDVLEMPYRP 292 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + G+R + G C GD I GD L + Y V++ T+ Sbjct: 293 EVWGAGLPGERP-YTYRLGGVSCLAGDVIGDYSFDRPLEVGDRLVFDDMAHYTMVKTTTF 351 Query: 383 NSRLLIPE-IMVNGSQFHIIRPRMTFQEL 410 N L I + Q + ++E Sbjct: 352 NGVKLPSIGIWSSKEQSFTLVRSFGYEEF 380 >gi|262376838|ref|ZP_06070065.1| predicted protein [Acinetobacter lwoffii SH145] gi|262308183|gb|EEY89319.1| predicted protein [Acinetobacter lwoffii SH145] Length = 397 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 79/387 (20%), Positives = 143/387 (36%), Gaps = 8/387 (2%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP Y + ++ + ++ + ++ Y+LK NS ++K + LG ++VS Sbjct: 6 TPAYVLNKESLRNSIKKIIDSLNKNFNKNILSYSLKTNSLPYILKEIKDLGGYAEVVSSD 65 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E A +IV++G K D L G N+E+ E++ L + Sbjct: 66 EYELAKLVGFKTNKIVYNGPLKCKDTF-LEALIGGSILNIETYREIEWLKLLPKNKTFNV 124 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I ++ + K F ++ S + +KI G+ H + Sbjct: 125 GIRINIDLKEISPEDSKEDEDYSRFGFSYYTGELKKAIDEISKIGNIKIDGLHAHRTTLT 184 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS-DYASLIHQY 263 I + K+ + N+ +ID+GGG +S + A+ + +Y Sbjct: 185 RSINCYK---KICEFIGLISNKFDLNLSYIDIGGGYYGIMNSKPTFDEYFSEIANSLSRY 241 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 F + II+EPG +VA +T VI +KK+ D + D + ND Y Sbjct: 242 FDLDKTVIIVEPGNAIVASCFDFITSVIDVKKNRDFYVITTDGSRNDVDPFFKKSTYFYE 301 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + I G C D + L GD + + GAY S + Sbjct: 302 LLHETKKKSDVVSLQKICGCTCLEYDKLFTIENSHLLSVGDKIVFKSVGAYTMALSPLFI 361 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQEL 410 R +++ SQ+ +IR + ++ Sbjct: 362 -RFFPKIYLLDESQYTLIRDNWSAKDF 387 >gi|26989648|ref|NP_745073.1| carboxynorspermidine decarboxylase [Pseudomonas putida KT2440] gi|148547977|ref|YP_001268079.1| carboxynorspermidine decarboxylase [Pseudomonas putida F1] gi|24984533|gb|AAN68537.1|AE016485_10 carboxynorspermidine decarboxylase [Pseudomonas putida KT2440] gi|148512035|gb|ABQ78895.1| carboxynorspermidine decarboxylase [Pseudomonas putida F1] Length = 365 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 51/387 (13%), Positives = 113/387 (29%), Gaps = 29/387 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y T + N + + ALK + +V + G S EL Sbjct: 4 TPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLFEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ S +L+ +++ + + Sbjct: 64 KLGRQ-KFAGETHAYSVAWADDEVEEMLE--NCDKIIFNSIGQLQRFAEQSEGKVRGLRV 120 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 +V+ + P L + I + + + Sbjct: 121 NPQVSS--------------SDYLLADPARPFSRLGEWDPAKIEQVIEQISGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F K+L + ++ H ++ + +GGG+ H + + + + + Sbjct: 167 NGDFGLFDKMLTHIEERFGHLLHKVEWVSLGGGI----HFTGEDYAVDAFCARLKAFSEK 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + + L V+ + V+ + +Y Sbjct: 223 YGVQVYLEPGEAAITNSASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIY------RLN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A + + G C GD + GD L T Y V+ +N Sbjct: 277 AKMAPNDGEHTYMVCGKSCLAGDIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLK 336 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQELIE 412 + ++ ++R F++ + Sbjct: 337 MPSIVVKQLDGSVEVVRE-FGFEDYVS 362 >gi|330971195|gb|EGH71261.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 371 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 75/361 (20%), Positives = 127/361 (35%), Gaps = 19/361 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELR 87 FY I +N FS F G V YA+KAN V++ L+ G D+ S E++ Sbjct: 16 FYTVDPRWITQNAQQFSGGFPG---TVLYAMKANPLVHVLEALSQGGINHFDVASLAEVQ 72 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A + + + V + + G+ F ++SE EL L + Sbjct: 73 TVHNTLPNAVQYLMNPVKSRHCLHEAYYRHGVRSFVLDSEEELSKLRDVLPERDSTISMF 132 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R A + + P ++ A++ G+ H+GSQ + Sbjct: 133 VRY-----APSESTAVYDLRGKFGASPALATQLVHQVAASTDWS--LGLSFHVGSQAIED 185 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS--SDYASLIHQYFG 265 + A D +R +++H+D+GGG Y + I Sbjct: 186 GPWLAALD---DADAIVRDTAQHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCEHIQTSPT 242 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 +I E GR LV L +V+S ++ + + + + + A + Sbjct: 243 LKDLNLICEAGRGLVYGGMSLFARVLSRREHSVFCGAGIFGGLLSAQQWLQFPA--RVWR 300 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNS 384 P +I GP C++ D +A +A R GD L + TGAY +N Sbjct: 301 DAAPYSGSAETTFNIFGPTCDSMDRLAFPYTLASDIREGDWLEFQSTGAYSVSLRTPFNG 360 Query: 385 R 385 Sbjct: 361 F 361 >gi|109897074|ref|YP_660329.1| carboxynorspermidine decarboxylase [Pseudoalteromonas atlantica T6c] gi|109699355|gb|ABG39275.1| carboxynorspermidine decarboxylase [Pseudoalteromonas atlantica T6c] Length = 375 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 120/386 (31%), Gaps = 23/386 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 +P Y +E N + ALK + + G + E Sbjct: 7 PSPCYVCEEAKLEANLQLMQRVQQESGVEIILALKGFPMWSTFDLVKQYLQGSTASAVWE 66 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 R +++ +ID + + + S + + + Sbjct: 67 ARLGK--EEIGKQVHAFSPAFKPADIDQLVDL-VDHISFNSFGQWNRFKAQILQSNVSPG 123 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I + + + P A L G +SG++ + Sbjct: 124 IRLNAE------------HREADTELYDPSAPGSRFGILAKDLKGADLSGLEGFHIHNLC 171 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + +SF + + + ++ I+ I+ GGG + A+L Sbjct: 172 ECDSFA-TERTILAVEEKFGQYFEQIKWINFGGGHLMTKDGYD---VEHLIATLKAFKAR 227 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + +ILEPG + G LV +VI I ++ D I+D++ M L Y Sbjct: 228 HPHLNVILEPGSAVAWQTGPLVCEVIDIVENRD-KIAIVDMSATAHMPDVLEMPYRPDVR 286 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A ++ G C TGD I L + G+ + E Y V++ +N Sbjct: 287 GAGKANEKA-FTYRFGGNSCLTGDAIDLYSFDHELQIGERIIFEDMIHYTMVKTTFFNGV 345 Query: 386 LLIPE-IMVNGSQFHIIRPRMTFQEL 410 I+ +F ++R +++ Sbjct: 346 EHPSIGILRKNGEFELVRKFE-YEDF 370 >gi|150010400|ref|YP_001305143.1| diaminopimelate decarboxylase [Parabacteroides distasonis ATCC 8503] gi|149938824|gb|ABR45521.1| diaminopimelate decarboxylase [Parabacteroides distasonis ATCC 8503] Length = 407 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 64/405 (15%), Positives = 122/405 (30%), Gaps = 16/405 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHL 74 ++ L TPFY + NY F + + Y+ K N V + + L Sbjct: 4 AIRNLIKSNGTPFYLFDEKGFIDNYRKLEGIFKAIYPNYQLSYSYKTNYTPFVCQLVRSL 63 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G ++VS+ E A ++IV++G K + D GI + E+ + ++ Sbjct: 64 GGYAEVVSDMEYTLAKKLGYDNKQIVYNGPSKGEEMFDHLEHQGILNIDSLDEA-KRIIS 122 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + R+N + + + + + + I IS Sbjct: 123 YVKGHPDRNYTVGIRINMHVGGDFISRFGLVPESKELQETVSLIKETVNLNLIGLHCHIS 182 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 A + + P+ Sbjct: 183 RSRGVEAWTKRTEIMLKAADDYIDGVPA---YISLGSGMYADMPEFLKQQFGGDTVPTYE 239 Query: 255 DYASL------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 DYA H Q + EPG +VA VTKV+S+K+ + +D Sbjct: 240 DYADCTIQPFADHYKDVENQPILFTEPGTTVVARYLSFVTKVLSVKEVRGRYIANMDGDY 299 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 ++ + + + + DI+G C D + + GD+L Sbjct: 300 HNLG-EICTMKKLPVTVLSGGKEQHTYTNMDIMGFTCLEQDVLYPGFE-QSIAEGDILVF 357 Query: 369 EKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIRPRMTFQELIE 412 + G Y V + + ++ + I TF ++ Sbjct: 358 DNVGGYSIVSKPQFI-KPQSAMYVLRTNGEVEQIMRAETFDDVFN 401 >gi|322376666|ref|ZP_08051159.1| carboxynorspermidine decarboxylase [Streptococcus sp. M334] gi|321282473|gb|EFX59480.1| carboxynorspermidine decarboxylase [Streptococcus sp. M334] Length = 375 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 79/382 (20%), Positives = 128/382 (33%), Gaps = 24/382 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVVDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDEDMEELLEITDHIVFNS----ERQLRKHGSRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ + +I S L V Sbjct: 119 GISVGLRLNPQCSTQGDHALYDPCAPGSRFGVILDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q S H+++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGSYLHHVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRETYNLEVYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY E Y V++ T Sbjct: 283 PPLRNGYEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFEDMAIYSFVKNNT 341 Query: 382 YNSRLLIPE-IMVNGSQFHIIR 402 +N L IM +++ Sbjct: 342 FNGIGLPSLYIMDENGDCDLVK 363 >gi|323486584|ref|ZP_08091905.1| hypothetical protein HMPREF9474_03656 [Clostridium symbiosum WAL-14163] gi|323399965|gb|EGA92342.1| hypothetical protein HMPREF9474_03656 [Clostridium symbiosum WAL-14163] Length = 383 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 71/408 (17%), Positives = 130/408 (31%), Gaps = 31/408 (7%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS 63 +Y++G L +TP+Y T +++N + A KA S Sbjct: 1 MEYWDGLL--------------KTPYYLVDETLLKQNLEILGEVSGRAGCKILLAQKAFS 46 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 +V L +G E R E VFS + + ++ + FN Sbjct: 47 MFSVYPLLREYLAGSAASGLFEARLGHE-EFGGETHVFSAAYREDEFDEILRYADHVVFN 105 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA 183 S ++K +R + GK A + + G + S Sbjct: 106 SPS--QVKKYGERVKAAGKSAGLRLNPECSTQEGH-AIYDPCSPGSRLGTTKRNLESAGK 162 Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 + + L + Q L L ++ + ++ +++GGG Sbjct: 163 FETELLPYLDGFHFHTLCEQNSDA-----LETTLAVLEEKFGNYLPRLKWLNLGGG---- 213 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 +H LI + +I LEPG +V + G LV+ V+ + Sbjct: 214 HHITREDYDRERLIRLILKLREKYGLEIYLEPGEAVVLNAGFLVSTVL-ETMENGIEIAV 272 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 LD + M L Y G++ H + GP C GD I G Sbjct: 273 LDTSAACHMPDVLEMPYRPPVLGGGEPGEKPH-TYRLGGPTCLAGDVIGDYSFDTPLTEG 331 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 + Y V++ T+N L ++ + +F ++ +++ Sbjct: 332 KKVIFSDMALYTMVKNNTFNGMPLPSLVLRDLQGRFRPVKE-FGYEDF 378 >gi|197106780|ref|YP_002132157.1| ornithine decarboxylase [Phenylobacterium zucineum HLK1] gi|196480200|gb|ACG79728.1| ornithine decarboxylase [Phenylobacterium zucineum HLK1] Length = 423 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 71/366 (19%), Positives = 119/366 (32%), Gaps = 15/366 (4%) Query: 34 TTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGELRRALAA 92 A+ F + F G V YA+KAN + VI+TL G D+ S E+ A Sbjct: 25 PDAVAVAARWFQDNFQG---DVFYAVKANPSPWVIETLVKSGVNSFDVASVPEIELVSAH 81 Query: 93 PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 A V G+ F +++ EL+ + + + G ++ V Sbjct: 82 APGARMAFMHPVKSRRAIAQAYFDHGVKTFALDTHEELQKILE---ATGGADDLSLIVRL 138 Query: 153 DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK 212 ++A KFG+ + SL A+ GV H+GSQ + ++ Sbjct: 139 GVSAEGASY----SLAGKFGVDAWEAPSLL-LAARRATQDRMGVSFHVGSQCMRPTAYQA 193 Query: 213 AFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKII 272 A + + + + + + ++ Sbjct: 194 AMAQANRAIVRAGVLVDVVDVGGGFPSVYPGMMPPDMADYTDSIHRGFAEMSVHEDTELW 253 Query: 273 LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND--FMRPTLYDAYHEINYIVNPA 330 EPGR LVA+ L+TKV K A ++ D M+ + Sbjct: 254 AEPGRGLVAEATSLLTKVELRKGDALYLNDGSYGSLFDAAHMKWPFPVKLYRGEGEAAHE 313 Query: 331 GDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIP 389 + GP C++ D + + R GD + I GAYG S +N Sbjct: 314 VEGPLKPYRFYGPTCDSIDHMPGPFWLPEDIREGDYVEIGMLGAYGIAMSTRFNGFGDAE 373 Query: 390 EIMVNG 395 + V Sbjct: 374 TVAVGD 379 >gi|149912637|ref|ZP_01901171.1| carboxynorspermidine decarboxylase [Roseobacter sp. AzwK-3b] gi|149813043|gb|EDM72869.1| carboxynorspermidine decarboxylase [Roseobacter sp. AzwK-3b] Length = 389 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 67/381 (17%), Positives = 116/381 (30%), Gaps = 27/381 (7%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P + AIE N ++ + + ALKA S ++ + SG Sbjct: 22 RVPSPCFVVDEVAIEANLKALADVGERSGARMLSALKAFSMFSLAPLVRTYLSGTCASGL 81 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R E FS K + ++ S FN ++ + + Sbjct: 82 FEARLGRE-EYGGEVTTFSTGYKPSEIDEIIQLSDHLVFNSPAQKDRF----GPRAAAAG 136 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + R+NP + K + + G P+ Q+ + + Sbjct: 137 VSVGLRINPQHSEGEVPKYDPCQPCSRLGFPVTQLDATTLEGV-----------EGLHMH 185 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + F + + + ++ I++GGG I + I Sbjct: 186 TLCEQGFEPLARTWAAVEPLIAPYLGQLKWINLGGGHHITRDD----YDREALIAFIRDL 241 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG + D GILV +++ I D++ M + Y Sbjct: 242 RTRHGVEVYLEPGEAVALDAGILVGEILDTFH-NTMPIAITDISATCHMPDVIEAPYRPA 300 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 AG + GP C GD I A G Y V++ T+N Sbjct: 301 LLDEADAG----HTYRLGGPSCLAGDIIGDYTWAAPLEIGQRFAFLDQAHYSMVKTNTFN 356 Query: 384 SRLLIPEIMVNG--SQFHIIR 402 L + N I+R Sbjct: 357 GVPLPAIALWNSRTDDLRIVR 377 >gi|49476298|ref|YP_034339.1| carboxynorspermidine decarboxylase [Bartonella henselae str. Houston-1] gi|49239106|emb|CAF28409.1| Carboxynorspermidine decarboxylase [Bartonella henselae str. Houston-1] Length = 365 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 52/383 (13%), Positives = 114/383 (29%), Gaps = 27/383 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + + +N + + V ALK + +V ++ G S EL Sbjct: 4 TPYYLIDKSKLIRNMEIIARLREMSGAKVLLALKCFATWSVFDLMSKYMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + + QR ++ K Sbjct: 64 RLGKEKFGKETHAYSVA-------WADYEIDETCSYADKIIFNSIQQLQRFANVTKTIQR 116 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP I+A+ + + + G + + ++ + + Sbjct: 117 GLRLNPGISASNFDLANPSRPFSRLGETNQKAIKEV----------LPLINGLMIHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F+ ++L+ + ++ + I +GGG+ H +A + + Sbjct: 167 NADFNLFDQMLKHMEERFAELFAAVDWISLGGGI----HFTAENYPLETFAERLKHFSKT 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 I LEPG + L V+ + ++ + +Y Sbjct: 223 YDVTIFLEPGEAAITKSTTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIY------REN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 ++ + G C GD R + GD L + T Y V+ +N Sbjct: 277 AKLEQNQGPYEIMVCGKSCLAGDIFGTFRFPEPLKIGDRLSFQDTAGYTMVKKNWFNGVT 336 Query: 387 LIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + I+ + ++ + Sbjct: 337 MPAIVIKECNGALTIQRQFSYND 359 >gi|298374798|ref|ZP_06984756.1| pyridoxal-dependent decarboxylase [Bacteroides sp. 3_1_19] gi|298269166|gb|EFI10821.1| pyridoxal-dependent decarboxylase [Bacteroides sp. 3_1_19] Length = 407 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 64/404 (15%), Positives = 121/404 (29%), Gaps = 16/404 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLG 75 + L TPFY + NY F + + Y+ K N V + + LG Sbjct: 5 IRNLIKSNGTPFYLFDEKGFIDNYRKLEGIFKAIYPNYQLSYSYKTNYTPFVCQLVRSLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS+ E A ++IV++G K + D GI + E+ + ++ Sbjct: 65 GYAEVVSDMEYTLAKKLGYDNKQIVYNGPSKGEEMFDHLEHQGILNIDSLDEA-KRIVSY 123 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + R+N + + + + + + I IS Sbjct: 124 VKGHPDRNYTVGIRINMHVGGDFISRFGLVPESKELQETVSLIKETVNLNLIGLHCHISR 183 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 A + + P+ D Sbjct: 184 SRGVEAWTKRTEIMLKAADDYIDGVPA---YISLGSGMYADMPEFLKQQFGGDTVPTYED 240 Query: 256 YASL------IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 YA H Q + EPG +VA VTKV+S+K+ + +D + Sbjct: 241 YADCTIQPFADHYKDVENQPILFTEPGTTVVARYLSFVTKVLSVKEVRGRYIANMDGDYH 300 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + + + + + DI+G C D + + GD+L + Sbjct: 301 NLG-EICTMKKLPVTVLSGGKEQHTYTNMDIMGFTCLEQDVLYPGFE-QSIAEGDILVFD 358 Query: 370 KTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIRPRMTFQELIE 412 G Y V + + ++ + I TF ++ Sbjct: 359 NVGGYSIVSKPQFI-KPQSAMYVLRTNGEVEQIMRAETFDDVFN 401 >gi|297568101|ref|YP_003689445.1| carboxynorspermidine decarboxylase [Desulfurivibrio alkaliphilus AHT2] gi|296924016|gb|ADH84826.1| carboxynorspermidine decarboxylase [Desulfurivibrio alkaliphilus AHT2] Length = 391 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 66/390 (16%), Positives = 122/390 (31%), Gaps = 16/390 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 V +P Y T + N + A K + ++ + + G Sbjct: 10 VERVPSPCYVCDTGKLAANLAALDEVQRRTGAKIILAFKGFAMWSLFPQIRAVLPGASAS 69 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E R A E V+ + D ++ + S S+ + + + Sbjct: 70 SLDEARLAAE-EFGGEVHVYCPAYREEDFAEMLGYADH--LVFNSFSQWQQYQGQVAAHQ 126 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 ++ RVNP+ + + + + G+ I G+ H Sbjct: 127 RQISCGIRVNPEYSEVEVDLYNPCGRYSRLGVTREHFRPELLAGPEQLAPAIEGLHFHAL 186 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + L ++ ++ ++ GGG I R LI Sbjct: 187 CEQ----NADALAGTLAAFNEKFGRFVQGMKWLNFGGGHHITRADYDREL----LCRLID 238 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ LEPG + ++G+LV +V+ I + + ILD + M L Y Sbjct: 239 ETQQRYGVQVYLEPGEAIALNIGVLVARVLDIV-ENEISIAILDTSAATHMPDVLEMPYR 297 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + G H + G C GD I PG L Y V++ T Sbjct: 298 PHIFGAGEPGQYPH-TYRLGGLSCLAGDIIGDYSFPEPLTPGQRLVFGDMAHYTMVKNTT 356 Query: 382 YNSRLLIPEIMVN--GSQFHIIRPRMTFQE 409 +N L + +IR R +++ Sbjct: 357 FNGVRLPSIATYDPATDNLKVIR-RFGYED 385 >gi|261414737|ref|YP_003248420.1| carboxynorspermidine decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371193|gb|ACX73938.1| carboxynorspermidine decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326289|gb|ADL25490.1| carboxynorspermidine decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 375 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 121/388 (31%), Gaps = 23/388 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P + T + +N + + ALK S + +G S Sbjct: 6 QVPSPCFVLDETRLRRNMEILDDIQKKTGVKIICALKGYSFWRSFPLIGEYLAGATASSL 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A + E VF+ V + + + + FN S+ + Sbjct: 66 NEARLARE-EMNKEVHVFAPVYEDDEIDAILDAADHITFNSFSQWQRYK------DKTLA 118 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 ++ + + +T + + + + + G+ + Sbjct: 119 HGVSAGIRVNPEFSTVETDLYNPCGKFSRLGVTEKEFKPELLDGIDGLHFHALCEQ---- 174 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 +L + ++ ++ GGG I HR +Y Sbjct: 175 -----DADALEGVLAAFEKHFGKYLPQMKWVNFGGGHHITRKDYHRDELVRILKDFSARY 229 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++I+EPG + G LVT V I + IL+V+++ M L Y Sbjct: 230 PHL---QVIMEPGEAIGWQTGELVTSVGDIVH-NEMDIAILNVSISAHMPDCLEMPYRPS 285 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 G++ H + G C GD + + GD + E Y V++ +N Sbjct: 286 VIGAAFPGEKAH-TYKLTGNSCLAGDQLGDFSFDEPLKVGDRIIFEDMIHYTMVKTTFFN 344 Query: 384 SRLLIPEI-MVNGSQFHIIRPRMTFQEL 410 +FH++ + T+++ Sbjct: 345 GVRHPSIGKFDENGKFHLL-HKFTYEQF 371 >gi|307329724|ref|ZP_07608881.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] gi|306884664|gb|EFN15693.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] Length = 424 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 84/401 (20%), Positives = 139/401 (34%), Gaps = 42/401 (10%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y TA+ + +A + YA KAN AV++ LA +G ++ S GE+ Sbjct: 19 PAYVYDLTALRAHARAVRDALP-PGLELYYAAKANPAPAVLQALASHITGYEVASGGEVE 77 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN---QRAVSLGKKA 144 A VP + F G GKT E+ AL G+ F+VESE EL+ L + A Sbjct: 78 HVR-AAVPGAPLAFGGPGKTEGELRRALTLGVERFHVESEQELRLLAGAAEDAGIPDVDV 136 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY-------------AYASTLPGV 191 + + + ++ G + FG+ + + + Sbjct: 137 LLRVNLPVAGDELGGAALAMGGRPSPFGLDPEAVERCLPLFAEASPGGGPLRLSGGGGPL 196 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 ++ G+ H+ S +D A + + +G + ++VGGG+G+ Y R Sbjct: 197 RLRGIHAHLASGLDAPAQVAVAAAIADWAAKLSERHGLGLTEVNVGGGMGVDYAHPDRRF 256 Query: 252 SSSDYASLIHQYFGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + Y + + +EPGR L G VT+V+ IK S + F ++ + Sbjct: 257 DWAAYGQGMADLALRHPGLTLRIEPGRALTVYCGWYVTEVLDIKHSGGEAFAVVRGGTHH 316 Query: 311 FMRPTLYDAYHEI----------------------NYIVNPAGDRLHIHADIVGPICETG 348 P +VG +C Sbjct: 317 LRTPATKQHDQPFQVLPMDAGDAGDAGDTGDTGDTWTRPWARPAVRAEPVTLVGQLCTPK 376 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLI 388 D +A +A R GD + GAY S + Sbjct: 377 DVLASRVPVAEVRVGDRVAFAMAGAYAWNISHHDFLMHPRP 417 >gi|167033842|ref|YP_001669073.1| carboxynorspermidine decarboxylase [Pseudomonas putida GB-1] gi|166860330|gb|ABY98737.1| carboxynorspermidine decarboxylase [Pseudomonas putida GB-1] Length = 365 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 51/387 (13%), Positives = 113/387 (29%), Gaps = 29/387 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y T + N + + ALK + +V + G S EL Sbjct: 4 TPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLFEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ S +L+ +++ + + Sbjct: 64 KLGRQ-KFAGETHAYSVAWADDEVEEMLE--NCDKIIFNSIGQLQRFAEQSEGKVRGLRV 120 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 +V+ + P L + I + + + Sbjct: 121 NPQVSS--------------SDYLLADPARPFSRLGEWDPAKIEQVIEQISGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F K+L + ++ H ++ + +GGG+ H + + + + + Sbjct: 167 NGDFGLFDKMLTHIEERFGHLLHKVEWVSLGGGI----HFTGEDYAVDAFCARLKAFSQT 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + + L V+ + V+ + +Y Sbjct: 223 YGVQVYLEPGEAAITNSASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIY------RLN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A + + G C GD + GD L T Y V+ +N Sbjct: 277 AKMAPNDGEHTYMVCGKSCLAGDIFGEYQFDRPLTIGDRLSFIDTAGYTMVKKNWFNGLK 336 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQELIE 412 + ++ ++R F++ + Sbjct: 337 MPSIVVKQLDGSVEVVRE-FGFEDYVS 362 >gi|70730900|ref|YP_260641.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens Pf-5] gi|68345199|gb|AAY92805.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens Pf-5] Length = 365 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 48/387 (12%), Positives = 108/387 (27%), Gaps = 29/387 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + N + + ALK + +V + G S EL Sbjct: 4 TPYYLIDKQKLLSNMQKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ S S+L+ + + + Sbjct: 64 KLGRQ-KFEGETHAYSVAWADDEIEEMLA--NCDKIIFNSISQLQRFADASAGKVRGLRV 120 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 +V+ + P L + I + + + Sbjct: 121 NPQVSS--------------SDYLLADPARPFSRLGEWDPAKIEQVIEQISGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F ++L + ++ H ++ + +GGG+ H + + + + + Sbjct: 167 NGDFGLFDQMLTTIEERFGHLLHKVEWVSLGGGI----HFTGEDYALDAFCARLKAFSQK 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + L V+ + V+ + +Y Sbjct: 223 YGVQVYLEPGEAAITQSASLEVTVLDTLYNGKHLAVVDSSIEAHMLDLLIY------RLN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + + G C GD + GD L Y V+ +N Sbjct: 277 AKLSPSAGEHTYMVCGKSCLAGDIFGEYQFDRPLAIGDRLSFIDAAGYTMVKKNWFNGLK 336 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQELIE 412 + ++ ++R F++ + Sbjct: 337 MPSIVVKQLDGSIEVVRE-FGFEDYLS 362 >gi|150007587|ref|YP_001302330.1| carboxynorspermidine decarboxylase [Parabacteroides distasonis ATCC 8503] gi|255013886|ref|ZP_05286012.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_7] gi|298375531|ref|ZP_06985488.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_19] gi|149936011|gb|ABR42708.1| carboxynorspermidine decarboxylase [Parabacteroides distasonis ATCC 8503] gi|298268031|gb|EFI09687.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_19] Length = 379 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 52/388 (13%), Positives = 114/388 (29%), Gaps = 18/388 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + + +P Y + N + + + A KA + + Sbjct: 4 INKIPSPCYVMEEKLLRNNLSLIKSVKERAGVNIILAFKAFALWKAFPIVREYIPFSTAS 63 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S+ E + A + + + S S+ + G Sbjct: 64 SKFEAQLAFEEMGSPAH---TYSPAYTEADFPLILRYSSHVTFNSLSQFHRFYPMVRADG 120 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP+ + + + G+ L G K+ + Sbjct: 121 NRVSCGLRINPEYSDVETDLYNPCAPGSRMGVT-----------GDLLGDKLPEGIEGLH 169 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + + L ++ ++ +++ +++GGG + A L Sbjct: 170 FHTLCESTSYDLERTLAEVERRFGRFLPHVKWLNMGGGHLMTRKGYD---VEHLIALLKG 226 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++I+EPG G L+T V+ I ++ I+D + M L Y Sbjct: 227 FKERYPNLELIMEPGSAFAWQTGFLLTTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYK 286 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A + I G C +GD++ GD L E Y V++ Sbjct: 287 PAIRFATDAVEGKP-TYRIGGNSCLSGDYMGDWSFDKPLEIGDKLIFEDMIHYTIVKTNM 345 Query: 382 YNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 +N + + ++ +++ Sbjct: 346 FNGIPHPSLALWSKDDQLVMYRTFGYED 373 >gi|123410961|ref|XP_001303794.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] gi|121885199|gb|EAX90864.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] Length = 398 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 80/382 (20%), Positives = 141/382 (36%), Gaps = 22/382 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 T + + + + YA+K ++K LA G G D S+ E+ Sbjct: 31 TAIWLADMNRVRYCANLWEAYLPKIKA--HYAMKCCDEPNLLKFLADHGFGFDCASKKEI 88 Query: 87 R-RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 V A RIVFS K + I A + G+ ++E EL+ + + Sbjct: 89 EVITQDLGVDANRIVFSHPLKNKEAILYAKEVGVERMVFDTEEELRKILRFYPEAEVYLR 148 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + + K+G P + +L AS L G H+GSQ D Sbjct: 149 VKPKFSNA----------KIPLSKKYGAPPEDVPNLLQLASELGA-NFIGFSFHVGSQCD 197 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD--YASLIHQY 263 I +F + F+ + +L + G N+ ID+GGG + + + I ++ Sbjct: 198 DINTFRQVFQYVAELKVKAEELGLNVCFIDIGGGFYPPHAPANNSFKEITETINNAIDEF 257 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM-----NDFMRPTLYD 318 FG + + + EPGRF ++ L+ V K D +YD Sbjct: 258 FGENEIEFVGEPGRFFASEYMDLILPVTCAKIHEDDHGERTQSIYIPDGIYGAFNSIIYD 317 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + + ++ GD + I G C++ D + + GDLL + + AY Sbjct: 318 HNNPH-FEIHTEGDSEKLPTTIWGQTCDSADIVYEDMMWPELEVGDLLIVRRFSAYTYSP 376 Query: 379 SGTYNSRLLIPEIMVNGSQFHI 400 + +N P +++N + I Sbjct: 377 TAFFNGFHHHPVVVLNKDEDDI 398 >gi|167915367|ref|ZP_02502458.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 112] Length = 1086 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 704 DALDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 763 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 764 PFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 823 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 824 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 875 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 876 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 930 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 931 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 990 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 991 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1046 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1047 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1076 >gi|187466288|emb|CAQ51904.1| arginine decarboxylase [Mus musculus] Length = 459 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 71/363 (19%), Positives = 131/363 (36%), Gaps = 29/363 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ A+ + + F YA+ NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAVVRKHFCFLKHLPR--VRPFYAVGCNSSLGVLKVLAELGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPA +I+ + K + +I A + G+ + ++E EL + + S IA Sbjct: 99 VQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S +FG + L A V++ GV HIGS + Sbjct: 158 ---------TQDSHSLNHLSLRFGASLKSCRHLLENAKKS-HVEVVGVSFHIGSGCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + Q GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADARLVFQMGEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADK--------------TFVILDVAMNDFM 312 I+ E GR+ V + +++ ++ D+ + + + F Sbjct: 268 CGVDILAELGRYYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYHLDEGVYGVFN 327 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + P+ D+ + + GP E D +A + + GD L + G Sbjct: 328 SVLFDNTCPTPALQKKPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMG 387 Query: 373 AYG 375 AY Sbjct: 388 AYT 390 >gi|238916082|ref|YP_002929599.1| diaminopimelate decarboxylase [Eubacterium eligens ATCC 27750] gi|238871442|gb|ACR71152.1| diaminopimelate decarboxylase [Eubacterium eligens ATCC 27750] Length = 412 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 77/413 (18%), Positives = 151/413 (36%), Gaps = 42/413 (10%) Query: 15 NVS-LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 V+ L+++A TP Y + T + G VCYA+KAN +I L Sbjct: 3 GVNELKEIAIKCGTPSYIFDTDELCARIDAMQQIL-GCGVTVCYAMKANP--FLISVLDK 59 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 ++ S GE + E+IV SGV K +I +++G E Sbjct: 60 KLDKFEVCSPGEFAICEKEGINREKIVLSGVNKEKKDILYTMKTGAVGIYT---VESLNQ 116 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + S + I +V + + ++FGI Q++ + L G+ + Sbjct: 117 LELINSCAVECGIKVKVLIRVTSG-----------NQFGINERQVYEIADRKDELKGIIL 165 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPS 252 G+ + G+Q ++ L+ + + ++ I+ G GL + Y + + Sbjct: 166 EGIQCYSGTQKKKLSQIEAEVVWLQAIAHTCEAEHGVELKEIEYGPGLSVDYFVTDKCDA 225 Query: 253 SSDYASLIHQY-----FGNLQCKIILEPGRFLVADVGILVTKVISIKKSA---------D 298 + + ++ + + + LE GR++ A GIL++++ +K + Sbjct: 226 MNTDFDELKEFAVMIKEMSEKFNVTLEMGRYIAATCGILISRIADMKMNDTTRYAIIDSG 285 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI-------HADIVGPICETGDFI 351 + +P E D +I G +C GD I Sbjct: 286 INHINYYGQAMAMKKPRCEFIPMEYTEGFADGVDHEVEVYSQGVQPYNICGSLCTVGDVI 345 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVN-GSQFHIIR 402 N ++ + GD++ GAY + + SR + +M + + + I+R Sbjct: 346 VKNLELKDAKIGDMIAFYNIGAYSVTEGIYLFLSRRMPAIVMYSMKNGYRIVR 398 >gi|167644230|ref|YP_001681893.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter sp. K31] gi|167346660|gb|ABZ69395.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter sp. K31] Length = 420 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 64/370 (17%), Positives = 110/370 (29%), Gaps = 13/370 (3%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P A+ F F G V YA+KAN + VI+ LA G D+ S E+ Sbjct: 19 PVALVRPDAVSVAARWFQAEFKG---DVFYAVKANPSPWVIRELADAGVRSFDVASLNEI 75 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + V + G+ F+ ++ EL + + I Sbjct: 76 ELVSQHAPGSRMAFMHPVKSRVAISAAYFDHGVRTFSFDTHEELAKIQDATGAAKDLNLI 135 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + KFG+ H +L A+ + GV H+GSQ + Sbjct: 136 -------VRMGVQADGAAYSLSGKFGVEPHNAPALL-LAARRATQDLMGVSFHVGSQCMR 187 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ A + + + + + + Sbjct: 188 PTAYQAAMAQASRALVRAGVLADVVDVGGGFPSIYPGMVPPDMSEYMAAIDRGFNDMMVH 247 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ EPGR LVA+ ++ KV K A ++ D Sbjct: 248 ESTQLWCEPGRALVAEASSVLVKVELKKGDALYLNDGSYGSLFDAAHMKWPFPVKAYRKD 307 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSR 385 + GP C++ D + + GD + I GAYG + +N Sbjct: 308 GGEVSEEALRPFRFYGPTCDSVDHMPGPFYLPDGIDEGDYIEIGMLGAYGVAMATRFNGF 367 Query: 386 LLIPEIMVNG 395 I + V Sbjct: 368 GEIDTVEVQD 377 >gi|262199172|ref|YP_003270381.1| Orn/DAP/Arg decarboxylase 2 [Haliangium ochraceum DSM 14365] gi|262082519|gb|ACY18488.1| Orn/DAP/Arg decarboxylase 2 [Haliangium ochraceum DSM 14365] Length = 486 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 97/446 (21%), Positives = 158/446 (35%), Gaps = 52/446 (11%) Query: 6 YFEGSLHAEN----VSLEKLAHVVQTP---FYCYSTTAIEKNYLTFSNAFD---GMDTMV 55 + L E +S+ +L + + +P + + N FS DT+V Sbjct: 36 VRDNVLRVEGGGHRISVPELWNEL-SPERGVHVVHADTLRSNLTRFSRLLSDTFARDTLV 94 Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 +ALK+ QAV+ LA G D+ S ELR ALAA +P I+ +GV K+ E+ + Sbjct: 95 AWALKSFPVQAVVNELAKEQCGADVGSLQELRMALAAGIPGRDIICTGVAKSAQELRAIV 154 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 G C + E L A S G+ I RVNP++ TH I+TG KFG+PI Sbjct: 155 DCGATCVLDNA-DEAAALESIAASAGRVVAIGVRVNPEVATPTHAMIATGAIGSKFGVPI 213 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 A + +++ V MHIG+ I+ A + R+ + Sbjct: 214 GAAEDFVAAVAAHAHLRVELVHMHIGAHFYHIDPESFARAINREAELVSALHRRYPIRRV 273 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQ-------------------YFGNLQCKIILEPG 276 GG R +++ EPG Sbjct: 274 DIGGGFRFPFLAPRQARQMGMDDERFHLVTQPDVLERTMAILSQRVIDMPSDIQVVAEPG 333 Query: 277 RFLVADVGILVTKVISIKKSADKTF----------VILDVAMNDFMRPTLYDAYHEINYI 326 +V + +V+++++ A +L A Sbjct: 334 TAIVCGASFSLGQVLAVRELARLDSPLDGRKIGVGWVLGTASTAEFILRAGVPNLLNQTC 393 Query: 327 VNPAGDRLHIHADIVGPICETGDFI---ALNRKIALPRPGDLLYIEKTGAY---GAVQSG 380 + + A + GP+C GD + ++A PRPGD+L + TGAY G Sbjct: 394 IADKAEERDFAAGVGGPLCFAGDVLSPPGFYLRMARPRPGDVLCLANTGAYIGCGF---- 449 Query: 381 TYNSRLLIPE-IMVNGSQFHIIRPRM 405 +++ +M +R Sbjct: 450 NFHNLPRFAVALMERDGNLRTVRRAE 475 >gi|198275888|ref|ZP_03208419.1| hypothetical protein BACPLE_02063 [Bacteroides plebeius DSM 17135] gi|198271517|gb|EDY95787.1| hypothetical protein BACPLE_02063 [Bacteroides plebeius DSM 17135] Length = 388 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 110/388 (28%), Gaps = 25/388 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y + KN + D + A KA + S Sbjct: 6 DKIPSPCYVMEEDLLRKNLTLIKHVADTAGVEIILAFKAFAMWKSFPIFREYIRYTTASS 65 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E E R A +S + S FN S+ E +A Sbjct: 66 EYEARLAFEEFGSKAHT-YSPAYTAQNFPAFLKYSSHITFNSLSQFERFYPLAKAYPEHV 124 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + + +FG+ + ++ Sbjct: 125 SCGIRVNPEY--SEVEVELYNPCAPGTRFGVTADLLPK-----------QLPEGIEGFHC 171 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 S ++ + L+ + ++ ++ +++GGG + L Sbjct: 172 HCHCESSSYELERTLQHIEEKFSRWFPQLKWLNLGGGHLMTRADYD---VDHLIGLLQGL 228 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 +IILEPG G LV V+ + +S ILDV+ M L Y Sbjct: 229 KSRYPHLQIILEPGSAFTWQTGPLVASVVDVVESRGIRTAILDVSFTCHMPDCLEMPYQP 288 Query: 323 INYIVN-------PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 R + G C +GD++ + + G+ + E Y Sbjct: 289 RVRNAESLPAEAVKTAAREEHVYRLGGNSCLSGDYMGSWKFDHELQVGERIVFEDMIHYT 348 Query: 376 AVQSGTYNSRLLIPEIMVN-GSQFHIIR 402 V++ +N +++ + + R Sbjct: 349 MVKTNMFNGIHHPSIALLHADGELEVYR 376 >gi|168482990|ref|ZP_02707942.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC1873-00] gi|172043345|gb|EDT51391.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC1873-00] gi|332201385|gb|EGJ15455.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA47368] Length = 375 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 73/390 (18%), Positives = 128/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDEDMEELLGITDHIVFNS----ERQLRKHGSRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++ +++ A P + + + Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIVENG--MEILVLDASATCHMPDVLEMPY 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + C TGD I + GD LY + Y V++ T Sbjct: 282 RPPLRNGFESQEKAHTYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|299143415|ref|ZP_07036495.1| putative Orn/DAP/Arg decarboxylase 2 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517900|gb|EFI41639.1| putative Orn/DAP/Arg decarboxylase 2 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 404 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 93/407 (22%), Positives = 163/407 (40%), Gaps = 40/407 (9%) Query: 16 VSLEKL----AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 + + K+ A + FY Y I++ F Y++K NSN V+K++ Sbjct: 1 MDINKIIEREAKKYDS-FYLYDENIIDEYTGRLKRNFP--KVKFLYSVKCNSNSLVVKSV 57 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G G D S E+ A + + I +S GK+ +I A++ +S E+K Sbjct: 58 FSRGFGADAASLNEVLMAEENGLSKDEIYYSAPGKSEYDIREAVK--KSTIIADSIGEIK 115 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 L A + I R+NP+ + ++ K KFGI Q+ + L + Sbjct: 116 KLQNIAEKMNIVLDIGVRINPEFSFDSFD-----GKPSKFGIDEEQLFEYIKN-NELKNI 169 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGLGIAYHSDHRP 250 I G+ +HI SQ +IE+ ++ + +L ++ R +++ I++G G+GI + +P Sbjct: 170 NIVGIHVHIKSQELKIENLISYYEKMFNLAERFRKILNTDLKFINMGSGIGIQFSPKDKP 229 Query: 251 PSSSDYASLIH-----QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + K+ +E GR+ G +TKV+ K S KT+VIL Sbjct: 230 LDIERLGEEFNRNLEIFLEEYPNTKVFIEVGRYATGKSGRYITKVMDKKISYGKTYVILK 289 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLH------------------IHADIVGPICET 347 +N F+RP + + + +VG +C Sbjct: 290 NTLNGFLRPAVIKMVEKFTTEPDLICWEPLFTCSDAFEIRPLKDSSQLEKVTLVGNLCTA 349 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMV 393 D I + + DL+ I GAY AV S ++S+ E+ + Sbjct: 350 TDVILEDVTMPKLECEDLVEITNAGAYAAVLSPMQFSSQEKPAELFL 396 >gi|155371707|ref|YP_001427241.1| hypothetical protein ATCV1_Z760R [Acanthocystis turfacea Chlorella virus 1] gi|155125027|gb|ABT16894.1| hypothetical protein ATCV1_Z760R [Acanthocystis turfacea Chlorella virus 1] Length = 371 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 76/360 (21%), Positives = 130/360 (36%), Gaps = 17/360 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY E+ + YA+K N + ++K L G D S+GE+ + Sbjct: 18 FYVCDPKFAERLVDEWYRMLPS--VHPFYAVKCNDDPVLLKYLEKNGVNFDCASKGEIAK 75 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L A RI+F+ K+ + + A G+ +S EL + + I Sbjct: 76 VLNAGALPSRILFAHTIKSPEALLYAKNVGVNIATFDSTFELDKMKLYHPACEAVLRIRC 135 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 K +K+G +I L +A + + G+ H+GS + Sbjct: 136 -----------DDPHALVKLEKYGANADEITPLLEHAKKIGM-NVKGISFHVGSGSRNPD 183 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS--SDYASLIHQYFGN 266 ++ KA K R+ S GH+I ID+GGG+ D + I +F Sbjct: 184 AYWKALKSAREAYDIAVSLGHSISIIDIGGGMYADIEDDGAITTCVADYILDGIKDFFSG 243 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + + I EPGRF +L +++ + ++ + +Y+ Sbjct: 244 INVEFIAEPGRFFAQHYSVLACQIVGKRIRDGFYEYFVNESTYGAFSNVIYEKAVPEPIP 303 Query: 327 VNPAGDRLHIH-ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 V + H + I G C+ D I + D +Y E+ GAY V +NS Sbjct: 304 VRDIDEDELKHISVIYGQTCDGIDVINKQTHLPELHIDDWIYFERWGAYTRVLHTGFNSF 363 >gi|313499053|gb|ADR60419.1| NspC [Pseudomonas putida BIRD-1] Length = 365 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 51/387 (13%), Positives = 112/387 (28%), Gaps = 29/387 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y T + N + + ALK + +V + G S EL Sbjct: 4 TPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLFEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ S +L+ ++ + + Sbjct: 64 KLGRQ-KFAGETHAYSVAWADDEVEEMLE--NCDKIIFNSIGQLQRFADQSEGKVRGLRV 120 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 +V+ + P L + I + + + Sbjct: 121 NPQVSS--------------SDYLLADPARPFSRLGEWDPAKIEQVIEQISGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F K+L + ++ H ++ + +GGG+ H + + + + + Sbjct: 167 NGDFGLFDKMLTHIEERFGHLLHKVEWVSLGGGI----HFTGEDYAVDAFCARLKAFSEK 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + + L V+ + V+ + +Y Sbjct: 223 YGVQVYLEPGEAAITNSASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIY------RLN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A + + G C GD + GD L T Y V+ +N Sbjct: 277 AKMAPNDGEHTYMVCGKSCLAGDIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLK 336 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQELIE 412 + ++ ++R F++ + Sbjct: 337 MPSIVVKQLDGSVEVVRE-FGFEDYVS 362 >gi|255023624|ref|ZP_05295610.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-208] Length = 117 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 1/115 (0%) Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 ++ +D M+D +RP LYDA+++ NP I G CE+GD + + + Sbjct: 1 NYIAVDGGMSDNIRPALYDAHYDAVLAANPE-KVAEETVAIAGKCCESGDMLIWDLPLPK 59 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD 414 G++L + TGAYG + YN P + V +I R T++ L++ D Sbjct: 60 SNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGIDKLIVARETYENLVQND 114 >gi|74316735|ref|YP_314475.1| diaminopimelate decarboxylase [Thiobacillus denitrificans ATCC 25259] gi|74056230|gb|AAZ96670.1| diaminopimelate decarboxylase [Thiobacillus denitrificans ATCC 25259] Length = 402 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 89/351 (25%), Positives = 149/351 (42%), Gaps = 13/351 (3%) Query: 51 MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDE 110 + YA+KANS+ +++TLA +G ++ S GEL A ++FSG GK DE Sbjct: 46 PGCDLFYAIKANSDLPILQTLAPHVAGFEVSSGGELAWVR-AHFAEIPVIFSGPGKLDDE 104 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 + AL+ G+ C +VES EL+ L + A LG+ AP+A RVN ++A + G K Sbjct: 105 LRQALEHGVDCLHVESRHELQRLAEIAARLGRTAPVALRVNLTLDALAETPLMMGGKPTP 164 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-DLTQQLRSNGH 229 FGIP Q+ + + P +++ G+ H+ S + + + ++G Sbjct: 165 FGIPTEQLPACLDWLRERPEIRLRGLHFHLLSHQLDAAAHLRLVAAYLAQTRRWCEAHGL 224 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN---LQCKIILEPGRFLVADVGIL 286 + H++VGGG+GI Y R +++ + ++ E GR++ A G Sbjct: 225 ALDHVNVGGGIGINYREPARQFDWPAFSAGLASLLHEAGLPGVRVRFELGRYVTAACGYY 284 Query: 287 VTKVISIKKSADKTFVILDVAMNDF-------MRPTLYDAYHEINYIVNPAGDRLHIHAD 339 +V+ IK S KTFV+ + F + + Sbjct: 285 AMQVVDIKHSHGKTFVVGRGGSHHFRTPYAQGHSHPFHVLPVDDWPYAFARPQAADQRVS 344 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIP 389 +VG +C D +A + + R D+L GAY S + Sbjct: 345 VVGQLCTPKDLLAFDAPVESVRCNDVLVFPYAGAYAWHISHHDFLRHPHPA 395 >gi|308803236|ref|XP_003078931.1| ornithine decarboxylase (ISS) [Ostreococcus tauri] gi|116057384|emb|CAL51811.1| ornithine decarboxylase (ISS) [Ostreococcus tauri] Length = 406 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 70/369 (18%), Positives = 137/369 (37%), Gaps = 35/369 (9%) Query: 42 LTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 ++ + +A+K ++ +I TLA LG+G D S+GE+ + VP+ERI+ Sbjct: 8 NSWRSTAKLPRVRPHFAVKCLPDKGIISTLAALGAGFDCASQGEVELVTSLGVPSERIIL 67 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKK 161 + K ++ + + +S SEL + V + I Sbjct: 68 AHPVKRPCDLRCIAEYQVPYTTFDSVSELHKILASQVDVKLVLRIR----------ADDP 117 Query: 162 ISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT 221 ++ K+G P+ ++ L + A+ L + I+GV H+GS +++ A K RD+ Sbjct: 118 MARLPLGAKYGAPLDKVSELLSVAALL-NLDIAGVSFHVGSSSRNPDAYRNAIKYARDIF 176 Query: 222 QQLRSNGHNIQHIDVGGGLGIAYH--------SDHRPPSSSDYASLIHQYFGNLQCKIIL 273 + S G + +D+GGG ++ + + +II Sbjct: 177 DEATSMGFKMHLLDLGGGFTGSFDANGNVSEAPSNFDRVREALDEIFPDDGTFEGLQIID 236 Query: 274 EPGRFLVADVGILVTKVISIKKSADKT-------------FVILDVAMNDFMRPTLYDAY 320 EPGR+ + V ++ ++ + + + D + Y Sbjct: 237 EPGRYFAQAPVTMACLVYGKREGSNDNGERQLDYYITDGLYGSFNGIIYDGLDLPTYFLQ 296 Query: 321 HEINYIV---NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + ++ I + + GP C++ D + N + GD L GAY Sbjct: 297 PNKVAPLAGLENEFEKTKISSTVYGPTCDSLDCVMRNVPLPELSNGDWLMFPDAGAYTMA 356 Query: 378 QSGTYNSRL 386 + +N L Sbjct: 357 GACDFNGIL 365 >gi|78777378|ref|YP_393693.1| carboxynorspermidine decarboxylase [Sulfurimonas denitrificans DSM 1251] gi|78497918|gb|ABB44458.1| Carboxynorspermidine decarboxylase [Sulfurimonas denitrificans DSM 1251] Length = 382 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 53/389 (13%), Positives = 115/389 (29%), Gaps = 19/389 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP+Y + + N + ALK + + + G Sbjct: 5 ESISTPYYMCDESLLRANLEILDYVQKQSGAKIILALKGFAMWSTFPLVKQYLRGCTCSG 64 Query: 83 EGE--LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E L R A V + DE + S ++L R + Sbjct: 65 LHEALLAREEFAKEDKNLEVHTYSPAFKDEDIDEIARISNHIVFNSPTQLFKYCDRVKKI 124 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 ++ R+NP+ +++ + + G + ++ + Sbjct: 125 NPHVNLSLRINPEQSSSPKDIYNPCGLYSRLGTTLANFDE-----------RVLEHIDGL 173 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + +L ++ N+++I+ GGG +H + +I Sbjct: 174 NFHALCEQDVDALEDVLVAFEEKFSKYFKNMKYINFGGG----HHITKKGYDVDKLIKII 229 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 ++ ++ LEPG + G+LV+ V+ I + ++ A Sbjct: 230 KEFITKYDVEVYLEPGEAVGWQTGVLVSSVLDIVHNGIDIAILDTSAEAHMP--DTLAMP 287 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + + G C GD + GD + E Y V++ Sbjct: 288 YRAMVRRSGEAGEKKHTYRFGGNTCLAGDIMGDYSFDKPLYVGDKVIFEDQIHYTFVKNT 347 Query: 381 TYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 T+N L +++ + + +Q+ Sbjct: 348 TFNGIKLPSLVILREDKTLDVIKEFGYQD 376 >gi|27370330|ref|NP_766463.1| antizyme inhibitor 2 [Mus musculus] gi|68564988|sp|Q8BVM4|ADC_MOUSE RecName: Full=Antizyme inhibitor 2; Short=AZI2; AltName: Full=Arginine decarboxylase-like protein; Short=ADC; Short=ARGDC gi|26346056|dbj|BAC36679.1| unnamed protein product [Mus musculus] gi|123248043|emb|CAM19110.1| arginine decarboxylase [Mus musculus] gi|148698276|gb|EDL30223.1| arginine decarboxylase [Mus musculus] gi|187951285|gb|AAI38974.1| Arginine decarboxylase [Mus musculus] gi|223460424|gb|AAI38975.1| Arginine decarboxylase [Mus musculus] Length = 459 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 71/363 (19%), Positives = 131/363 (36%), Gaps = 29/363 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ A+ + + F YA+ NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAVVRKHFCFLKHLPR--VRPFYAVGCNSSLGVLKVLAELGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPA +I+ + K + +I A + G+ + ++E EL + + S IA Sbjct: 99 VQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S +FG + L A V++ GV HIGS + Sbjct: 158 ---------TQDSHSLNHLSLRFGASLKSCRHLLENAKKS-HVEVVGVSFHIGSGCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + Q GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADARLVFQMGEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADK--------------TFVILDVAMNDFM 312 I+ E GR+ V + +++ ++ D+ + + + F Sbjct: 268 CGVDILAELGRYYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYYLDEGVYGVFN 327 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + P+ D+ + + GP E D +A + + GD L + G Sbjct: 328 SVLFDNTCPTPALQKKPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMG 387 Query: 373 AYG 375 AY Sbjct: 388 AYT 390 >gi|148988355|ref|ZP_01819802.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP6-BS73] gi|147926036|gb|EDK77110.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP6-BS73] Length = 375 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 73/390 (18%), Positives = 127/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDEDMEELLGITDHIVFNS----ERQLRKHGSRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++ +++ A P + + + Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIVENG--MEILVLDASATCHMPDVLEMPY 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + C TGD I + GD LY + Y V++ T Sbjct: 282 RPPLRNGFESQEKAHTYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|254185262|ref|ZP_04891851.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1655] gi|184215854|gb|EDU12835.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia pseudomallei 1655] Length = 1137 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 755 DALDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 814 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 815 PFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 874 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 875 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 926 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 927 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 981 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 982 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 1041 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1042 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1097 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1098 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1127 >gi|332885338|gb|EGK05589.1| carboxynorspermidine decarboxylase [Dysgonomonas mossii DSM 22836] Length = 393 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 60/388 (15%), Positives = 114/388 (29%), Gaps = 17/388 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + V +P + + N + D + A KA + + Sbjct: 17 INKVPSPCFVMEEELLRNNLSLIKSVKDRAGVNIILAFKAYAMWKSFPIIREYIPCSTAS 76 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E + A + + E S S+ + Sbjct: 77 SVYEAQL---AYEEMGSLAHTFTPAYTSENFPLFMRYSSHITFNSLSQFDRFYPETLKHS 133 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K R+NP+ + + + G+ + Q+ G K+ + Sbjct: 134 HKVSCGLRINPEYSTVETDLYNPATPGSRLGVSLDQL-----------GDKLPEGLEGLH 182 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 S + K L + Q+ ++ ++GGG + S Sbjct: 183 FHTLCESSSYDLEKTLEVIEQKFGHLLSQVKWFNMGGGHLMTRKDYDVEHLIGLLQSFKA 242 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++ +II+EPG G+LV+ V+ I ++ ILDV+ M L Y Sbjct: 243 KHPNL---EIIMEPGSAFAWQTGVLVSTVVDIVENRGIKTAILDVSFACHMPDCLEMPYK 299 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + + G C +GDF+ GD + E Y V++ Sbjct: 300 PHIRGAYHEPVQGLPTYRMGGSSCLSGDFVGEWSFDEPLLIGDKIIFEDMIHYTIVKTTM 359 Query: 382 YNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 +N + N S I ++++ Sbjct: 360 FNGISHPAIALWNKSNQLEIYREFSYED 387 >gi|315613156|ref|ZP_07888066.1| carboxynorspermidine decarboxylase [Streptococcus sanguinis ATCC 49296] gi|315314718|gb|EFU62760.1| carboxynorspermidine decarboxylase [Streptococcus sanguinis ATCC 49296] Length = 375 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 77/382 (20%), Positives = 126/382 (32%), Gaps = 24/382 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + A Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDADLEELLEITDHIVFNS----ERQLRKHGARCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ + +I S L V Sbjct: 119 GISVGLRLNPQCSTQGNHALYDPCAPGSRFGVSLDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E+ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLETTLKAVE------EQFGPYLHEVKWLNMGGGHHITREDYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRDTYNLEVYIEPGEAIALNAGYLATEVLDIV-ENGMDILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 ++ H + C TGD I + GD LY E Y V++ T Sbjct: 283 PPLRNGFEPQEKAH-TYRLSSNTCLTGDVIGDYSFENPIQIGDRLYFEDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIR 402 +N L +++ +++ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLVK 363 >gi|148984662|ref|ZP_01817930.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP3-BS71] gi|147923053|gb|EDK74168.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP3-BS71] gi|301799905|emb|CBW32484.1| putative carboxynorspermidine decarboxylase [Streptococcus pneumoniae OXC141] Length = 375 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 79/390 (20%), Positives = 130/390 (33%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDEDMEELLGITDHIVFNS----ERQLRKHGSRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q H ++ I++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGPYLHEVKWINMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY + Y V++ T Sbjct: 283 PPLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|262381916|ref|ZP_06075054.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_33B] gi|262297093|gb|EEY85023.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_33B] Length = 379 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 52/388 (13%), Positives = 113/388 (29%), Gaps = 18/388 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + + +P Y + N + + + A KA + + Sbjct: 4 INKIPSPCYVMEENLLRNNLSLIKSVKERAGVNIILAFKAFALWKAFPIVREYIPFSTAS 63 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S+ E + A + + + S S+ + G Sbjct: 64 SKFEAQLAFEEMGSPAH---TYSPAYTEADFPLILRYSSHVTFNSLSQFHRFYPMVRADG 120 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP+ + + + G+ L G + + Sbjct: 121 NRVSCGLRINPEYSDVETDLYNPCAPGSRMGVT-----------GDLLGDTLPEGIEGLH 169 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + + L ++ ++ +++ +++GGG + A L Sbjct: 170 FHTLCESTSYDLERTLAEVERRFGRFLPHVKWLNMGGGHLMTRKDYD---VEHLIALLKG 226 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++I+EPG G L+T V+ I ++ I+D + M L Y Sbjct: 227 FKERYPNLELIMEPGSAFAWQTGFLLTTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYK 286 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A + I G C +GD++ GD L E Y V++ Sbjct: 287 PAIRFATDAVEGKP-TYRIGGNSCLSGDYMGDWSFDKPLAIGDKLIFEDMIHYTIVKTNM 345 Query: 382 YNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 +N + N ++ +++ Sbjct: 346 FNGIPHPSLALWNKDDQLVVYRTFGYED 373 >gi|237507384|ref|ZP_04520099.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia pseudomallei MSHR346] gi|234999589|gb|EEP49013.1| iron-sulfur cluster-binding protein, rieske family/carboxynorspermidine decarboxylase [Burkholderia pseudomallei MSHR346] Length = 1110 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 111/390 (28%), Gaps = 17/390 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y + + + Y LK S+ ++ + G S Sbjct: 728 DALDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASS 787 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + + ++ + + Y + + A L Sbjct: 788 PFEAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHDALAGRLSC 847 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + S L G+ Sbjct: 848 GLRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFH-------- 899 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 F + + + L ++L + I++GGG + + + Sbjct: 900 TNCDSTDFSRLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVD-----RFRACAKR 954 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + +EPG +V G ++ V+ + S +LD +N + Y + Sbjct: 955 LREHFGVALFIEPGAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPD 1014 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 V+ + G C GD R A R G + GAY V++ + Sbjct: 1015 ----VDGHHPAHAHAYLLAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRF 1070 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 N L R ++++ + Sbjct: 1071 NGINLPSVYRRGEDGALAAVQRFSYEDFLR 1100 >gi|256368792|ref|YP_003106298.1| carboxynorspermidine decarboxylase [Brucella microti CCM 4915] gi|255998950|gb|ACU47349.1| carboxynorspermidine decarboxylase [Brucella microti CCM 4915] Length = 365 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 116/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T +++N + + ALK + +V ++ G S E Sbjct: 3 QTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSLNE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 63 VRLGHE-KFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERF------ADKASGIK 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP +++++ P L + + + + Sbjct: 116 RGLRLNPGVSSSSFD----------LADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L D+ ++ S H ++ + +GGG+ H + + + + Sbjct: 166 ENSDFSLFDRMLSDIEEKFGSLLHRVEWVSLGGGI----HFTGEDYPVDAFCARLKSFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KFGVQVYLEPGEASITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A ++ + G C GD GD L E Y V+ +N Sbjct: 276 KAKMAPNKGGHSYMVCGKSCLAGDIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V ++R + + Sbjct: 336 KMPA-IAVRELDGTVKLVRE-FDYADF 360 >gi|15902865|ref|NP_358415.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae R6] gi|116515395|ref|YP_816296.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae D39] gi|168494349|ref|ZP_02718492.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC3059-06] gi|182683867|ref|YP_001835614.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CGSP14] gi|221231693|ref|YP_002510845.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae ATCC 700669] gi|303254985|ref|ZP_07341064.1| putative carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS455] gi|303259832|ref|ZP_07345807.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP-BS293] gi|303262246|ref|ZP_07348190.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP14-BS292] gi|303264668|ref|ZP_07350586.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS397] gi|303267169|ref|ZP_07353036.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS457] gi|303269417|ref|ZP_07355186.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS458] gi|15458422|gb|AAK99625.1| Carboxynorspermidine decarboxylase [Streptococcus pneumoniae R6] gi|116075971|gb|ABJ53691.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae D39] gi|182629201|gb|ACB90149.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CGSP14] gi|183575664|gb|EDT96192.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC3059-06] gi|220674153|emb|CAR68676.1| putative carboxynorspermidine decarboxylase [Streptococcus pneumoniae ATCC 700669] gi|301794065|emb|CBW36469.1| putative carboxynorspermidine decarboxylase [Streptococcus pneumoniae INV104] gi|301801767|emb|CBW34478.1| putative carboxynorspermidine decarboxylase [Streptococcus pneumoniae INV200] gi|302598065|gb|EFL65132.1| putative carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS455] gi|302636569|gb|EFL67060.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP14-BS292] gi|302639037|gb|EFL69497.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP-BS293] gi|302641036|gb|EFL71414.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS458] gi|302643284|gb|EFL73564.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS457] gi|302645755|gb|EFL75984.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS397] Length = 375 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 74/390 (18%), Positives = 127/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + A Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDEDMEELLGITDHIVFNS----ERQLRKHGARCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++ +++ A P + + + Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIVENG--MEILVLDASATCHMPDVLEMPY 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + C TGD I + GD LY + Y V++ T Sbjct: 282 RPPLRNGFESQEKAHTYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|256839772|ref|ZP_05545281.1| carboxynorspermidine decarboxylase [Parabacteroides sp. D13] gi|256738702|gb|EEU52027.1| carboxynorspermidine decarboxylase [Parabacteroides sp. D13] Length = 379 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 52/388 (13%), Positives = 114/388 (29%), Gaps = 18/388 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + + +P Y + N + + + A KA + + Sbjct: 4 INKIPSPCYVMEEKLLRNNVSLIKSVKERAGVNIILAFKAFALWKAFPIVREYIPFSTAS 63 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S+ E + A + + + S S+ + G Sbjct: 64 SKFEAQLAFEEMGSPAH---TYSPAYTEADFPLILRYSSHVTFNSLSQFHRFYPMVRADG 120 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP+ + + + G+ L G K+ + Sbjct: 121 NRVSCGLRINPEYSDVETDLYNPCAPGSRMGVT-----------GDLLGDKLPEGIEGLH 169 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + + L ++ ++ +++ +++GGG + A L Sbjct: 170 FHTLCESTSYDLERTLAEVERRFGRFLPHVKWLNMGGGHLMTRKGYD---VEHLIALLKG 226 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++I+EPG G L+T V+ I ++ I+D + M L Y Sbjct: 227 FKERYPNLELIMEPGSAFAWQTGFLLTTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYK 286 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A + I G C +GD++ GD L E Y V++ Sbjct: 287 PAIRFATDAVEGKP-TYRIGGNSCLSGDYMGDWSFDKPLEIGDKLIFEDMIHYTIVKTNM 345 Query: 382 YNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 +N + + ++ +++ Sbjct: 346 FNGIPHPSLALWSKDDQLVMYRTFGYED 373 >gi|302185892|ref|ZP_07262565.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae 642] Length = 371 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 77/361 (21%), Positives = 129/361 (35%), Gaps = 19/361 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELR 87 FY T I +N FS F G V YA+KAN V++ L+ G D+ S E++ Sbjct: 16 FYTVDTHWITRNAQQFSGCFPG---TVLYAMKANPLPQVLEALSQGGINHFDVASLAEVQ 72 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A + + + V + + G+ F ++SE EL L + Sbjct: 73 TVHNTLPNAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELLKLRDVLPERDSTISLF 132 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R A + + P ++ AS+ G+ H+GSQ + Sbjct: 133 VRY-----APSESTAVYDLRGKFGASPALATQLVHQVASSTDWS--LGLSFHVGSQAIEE 185 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS--SDYASLIHQYFG 265 + A D +R +++H+D+GGG Y + + I Sbjct: 186 GPWLAALD---DADAIVRDTAQHVRHLDIGGGFPGNYLNSMGNTTDLVGRVCEHIQTSPT 242 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 +I E GR LV L +V+S ++ + + + + + A + Sbjct: 243 LKDLNLICEAGRGLVYGGMSLFARVLSRREHSVFCGAGIFGGLLSAQQWLQFPA--RVWR 300 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNS 384 P +I GP C++ D +A +A R GD L + TGAY +N Sbjct: 301 DAAPYTGAAENTFNIFGPTCDSMDRLAFPYTLASDIREGDWLEFQSTGAYSVSLRTPFNG 360 Query: 385 R 385 Sbjct: 361 F 361 >gi|241948045|ref|XP_002416745.1| ornithine decarboxylase, putative [Candida dubliniensis CD36] gi|223640083|emb|CAX44329.1| ornithine decarboxylase, putative [Candida dubliniensis CD36] Length = 494 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 79/408 (19%), Positives = 138/408 (33%), Gaps = 64/408 (15%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I + + + YA+K NSN V+ L LG D S+ E+ Sbjct: 83 FFVCDLGEIINSVNQWKQQLPMI--QPYYAVKCNSNFKVLTLLNELGINFDCASKNEIDL 140 Query: 89 ALAAPVPAERI--VFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 L+ + +++ KT I A + V++ EL L + + Sbjct: 141 ILSLNIQQAHQKIIYANPCKTNSFIRHAANENVNLTTVDNIYELYKLAKFHPHCKILIRL 200 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 T + + KFG ++ + G++I GV H+GS Sbjct: 201 I----------TDDSTAQCQLSSKFGCELNIAIKEILPKAKELGLQIYGVAFHVGSGAKD 250 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA-SLIHQYFG 265 S ++A K R L ++ S G + +D+GGG + ++ Sbjct: 251 FNSIYQAIKNSRILFNEMLSLGFQPKLLDIGGGFERETFLQSSQMVKFALSKYFPQEFIQ 310 Query: 266 NLQCKIILEPGRFLVADVGILVTKVI-----------------------------SIKKS 296 + + K I EPGRF+VA+ L+T VI ++ Sbjct: 311 SNEIKFIAEPGRFMVANAFTLITHVIARRDLSTQTTAAAGAATVMGSNGNDIVPSAMLYI 370 Query: 297 ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG-------------------DRLHIH 337 D + L+ + D P +Y ++ + Sbjct: 371 NDGVYGNLNCILFDHQNPKVYVLTNQNQLFYKQEMMMKSLLIDTSANNNNNNNNKVDGFN 430 Query: 338 ADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNS 384 I GP C+ D ++ K++ + GD L+ E GAY + S +N Sbjct: 431 FSIWGPTCDGLDCVSSLVKLSKNVQVGDWLFFENVGAYTSCASTKFNG 478 >gi|189466064|ref|ZP_03014849.1| hypothetical protein BACINT_02434 [Bacteroides intestinalis DSM 17393] gi|189434328|gb|EDV03313.1| hypothetical protein BACINT_02434 [Bacteroides intestinalis DSM 17393] Length = 366 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 58/379 (15%), Positives = 112/379 (29%), Gaps = 20/379 (5%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 + KN + D + A K+ + S E R AL Sbjct: 1 MDEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYEARLALE 60 Query: 92 APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVN 151 + + + S S+ V G R+N Sbjct: 61 EFGSKAH---TYSPAYTEADFPEIMRCSSHITFNSLSQFCRFYPAVVKEGSGISCGIRIN 117 Query: 152 PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFH 211 P+ + + + +FGI + L + S + Sbjct: 118 PEYSEVETELYNPCAPGTRFGIT-----------ADLLTETLPQGIEGFHCHCHCESSSY 166 Query: 212 KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI 271 + + L+ L ++ I+ +++GGG + + +I Sbjct: 167 ELERTLKHLEEKFSYWFPQIKWLNLGGGHLMTRKDYDVEHLIHLLN---DLRSRHPHLRI 223 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 ILEPG G+L ++V+ I +S IL+V+ M L Y Sbjct: 224 ILEPGSAFTWQTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPAVCGAEMGN 283 Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 + H+ + G C +GD++ + G+ + E Y V++ +N Sbjct: 284 NGCHV-YRLGGNSCLSGDYMGDWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIA 342 Query: 392 MV-NGSQFHIIRPRMTFQE 409 M + I R ++++ Sbjct: 343 MWTKDGKAEIFRQ-FSYED 360 >gi|15900800|ref|NP_345404.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae TIGR4] gi|111658138|ref|ZP_01408836.1| hypothetical protein SpneT_02000704 [Streptococcus pneumoniae TIGR4] gi|149010437|ref|ZP_01831808.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP19-BS75] gi|14972394|gb|AAK75044.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae TIGR4] gi|147764918|gb|EDK71847.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP19-BS75] Length = 375 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 73/390 (18%), Positives = 125/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L FN E + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDADLEELLEIMDHIVFNS----ERQLRKHGPRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++ +++ A P + + + Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIVENG--MEILVLDASATCHMPDVLEMPY 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + C TGD I + GD LY + Y V++ T Sbjct: 282 RPPLRNGFESQEKAHTYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|270294148|ref|ZP_06200350.1| carboxynorspermidine decarboxylase [Bacteroides sp. D20] gi|270275615|gb|EFA21475.1| carboxynorspermidine decarboxylase [Bacteroides sp. D20] Length = 381 Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 57/386 (14%), Positives = 114/386 (29%), Gaps = 20/386 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 +P Y + KN + D + A K+ + S Sbjct: 9 FPSPCYIMEEGLLRKNLALIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVY 68 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R A + T + ++ S S+ V+ G Sbjct: 69 EARLA--LEEFGSKAHTYSPAYTEADFPEIMRC-SSHITFNSLSQFHRFYPVVVAEGSGI 125 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 R+NP+ + + + +FG+ + ++ Sbjct: 126 SCGIRINPEYSEVETELYNPCAPGTRFGVMADPLPE-----------ELPAGIEGFHCHC 174 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 S ++ L L + I+ +++GGG + L Sbjct: 175 HCESSSYELEHTLEHLEGKFSRWFSQIKWLNLGGGHLMTRKDYDVEHLVRLLQGLK---G 231 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +IILEPG G+L ++++ I ++ IL+V+ M L Y Sbjct: 232 RYPHLQIILEPGSAFTWQTGVLSSEIVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAV 291 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 GD + G C +GD++ L + G+ + E Y V++ +N Sbjct: 292 RGAEM-GDAGPYVYRLGGNSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTTVKTNMFNG 350 Query: 385 RLLIPEIMV-NGSQFHIIRPRMTFQE 409 M + + + ++++ Sbjct: 351 IHHPAIAMWTKEGKAEVFKQ-FSYED 375 >gi|320459348|dbj|BAJ69969.1| putative diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 518 Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 23/246 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ G HIGS I ++F A K + L + ++ + + ID+GGG +AY Sbjct: 272 ELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDS 331 Query: 251 PSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA------ 297 D + ++ G I EPGR++VA G+ + +V +IK Sbjct: 332 MDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHVHLSDVKD 391 Query: 298 -------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ +V +D M+D +RP LY A + + N G + A + G CE+GD Sbjct: 392 SAGNPIAERVYVSVDGGMSDNIRPALYGADY-TARLANRTGSAETMLARVCGMHCESGDI 450 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + GD+L + TGAYG + YN L+ + V+ S H++ R T + Sbjct: 451 VVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLRRQTVDD 510 Query: 410 LIELDS 415 L+ LD Sbjct: 511 LLNLDV 516 Score = 96.8 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 8/179 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVC 56 M+A EGS+ + E L +P Y T + F + AFD T V Sbjct: 1 MNA----EGSIEFHGRTAESLLDEFGSPLYLIDTDEVVARARHFVRAAAEAFDTSTTHVS 56 Query: 57 YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 +A KA ++ V++ + G +D + GE++ ALAA VP R+V G K+ +EI LA++ Sbjct: 57 FAGKAFLSKEVVRLVTEAGMFVDTCTMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIE 116 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 G ++ E + + A LGK+A + RV ++A H+ IST ++ KFG+P+ Sbjct: 117 QGFAKIVIDEPDEPERVAAIARRLGKRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPL 175 >gi|296454952|ref|YP_003662096.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. longum JDM301] gi|296184384|gb|ADH01266.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. longum JDM301] Length = 530 Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 23/246 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ G HIGS I ++F A K + L + ++ + + ID+GGG +AY Sbjct: 284 ELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDS 343 Query: 251 PSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA------ 297 D + ++ G I EPGR++VA G+ + +V +IK Sbjct: 344 MDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHVHLSDAKD 403 Query: 298 -------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ +V +D M+D +RP LY A + + N G + A + G CE+GD Sbjct: 404 SAGNPITERVYVSVDGGMSDNIRPALYGADY-TARLANRTGSAETMLARVCGMHCESGDI 462 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + GD+L + TGAYG + YN L+ + V+ S H++ R T + Sbjct: 463 VVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLRRQTVDD 522 Query: 410 LIELDS 415 L+ LD Sbjct: 523 LLNLDV 528 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 G++ + E L +P Y T + F + AF+ T V +A KA Sbjct: 16 NGAIAFHGRTAESLLDKFGSPLYLIDTDEVSARAKHFVRAAAEAFNTSTTHVSFAGKAFL 75 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ +++ + G +D + GE++ ALAA VP R+V G K+ +EI LA++ G Sbjct: 76 SKEIVRLVTEAGMFVDTCTMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIV 135 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 ++ E + + A LGK+A + RV ++A H+ IST ++ KFG+P+ Sbjct: 136 IDEPDEPERVAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPL 187 >gi|213693167|ref|YP_002323753.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524628|gb|ACJ53375.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 530 Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 23/246 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ G HIGS I ++F A K + L + ++ + + ID+GGG +AY Sbjct: 284 ELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDS 343 Query: 251 PSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA------ 297 D + ++ G I EPGR++VA G+ + +V +IK Sbjct: 344 MDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHVHLSDVKD 403 Query: 298 -------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ +V +D M+D +RP LY A + + N G + A + G CE+GD Sbjct: 404 SAGNPIAERVYVSVDGGMSDNIRPALYGADY-TARLANRTGSAETMLARVCGMHCESGDI 462 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + GD+L + TGAYG + YN L+ + V+ S H++ R T + Sbjct: 463 VVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLRRQTVDD 522 Query: 410 LIELDS 415 L+ LD Sbjct: 523 LLNLDV 528 Score = 96.4 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 EGS+ + E L +P Y T + F + AFD T V +A KA Sbjct: 16 EGSIEFHGRTAESLLDEFGSPLYLIDTDEVVARARHFVRAAAEAFDTSTTHVSFAGKAFL 75 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ V++ + G +D + GE++ ALAA VP R+V G K+ +EI LA++ G Sbjct: 76 SKEVVRLVTEAGMFVDTCTMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIV 135 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 ++ E + + A LGK+A + RV ++A H+ IST ++ KFG+P+ Sbjct: 136 IDEPDEPERVAAIARRLGKRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPL 187 >gi|189440468|ref|YP_001955549.1| diaminopimelate decarboxylase [Bifidobacterium longum DJO10A] gi|189428903|gb|ACD99051.1| Diaminopimelate decarboxylase [Bifidobacterium longum DJO10A] Length = 530 Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 23/246 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ G HIGS I ++F A K + L + ++ + + ID+GGG +AY Sbjct: 284 ELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDS 343 Query: 251 PSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA------ 297 D + ++ G I EPGR++VA G+ + +V +IK Sbjct: 344 MDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHVHLSDAKD 403 Query: 298 -------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ +V +D M+D +RP LY A + + N G + A + G CE+GD Sbjct: 404 SAGNPIAERVYVSVDGGMSDNIRPALYGADY-TARLANRTGSAETMLARVCGMHCESGDI 462 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + GD+L + TGAYG + YN L+ + V+ S H++ R T + Sbjct: 463 VVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLRRQTVDD 522 Query: 410 LIELDS 415 L+ LD Sbjct: 523 LLNLDV 528 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 EGS+ + E L +P Y T + F + AF+ T V +A KA Sbjct: 16 EGSIEFHGRTAESLLDEFGSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFL 75 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ V++ + G +D + GE++ ALAA VP R+V G K+ +EI LA++ G Sbjct: 76 SKEVVRLVTEAGMFVDTCTMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIV 135 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 ++ E + + A LGK+A + RV ++A H+ IST ++ KFG+P+ Sbjct: 136 IDEPDEPERVAAIARRLGKRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPL 187 >gi|144897787|emb|CAM74651.1| Ornithine decarboxylase [Magnetospirillum gryphiswaldense MSR-1] Length = 376 Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 87/350 (24%), Positives = 135/350 (38%), Gaps = 22/350 (6%) Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 V YA+KAN +I+ L LGS D+ S GE+ L A+ I F K +I Sbjct: 40 AQVYYAVKANPAPEIIRMLVGLGSSFDVASRGEVDLCLENGARADNISFGNTIKKQSDIA 99 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 A G+ + +SE+EL+ L + A I + KFG Sbjct: 100 YAYSKGVRLYAFDSEAELEKLAESAPGSRVFCRILMTCDGA----------EWPLSRKFG 149 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 I L A L + GV H+GSQ + + A L L G +++ Sbjct: 150 CEIEMAKDLLVKARELG-MDPYGVSFHVGSQQTDLNQWDIAVGKAAMLFTALNEAGIDLK 208 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ----CKIILEPGRFLVADVGILVT 288 +++GGG Y +D P+ YA + N +I+EPGR LV D G+L Sbjct: 209 MMNLGGGFPAKYRTD--IPAVERYADAVMHAMTNHFGNALPAMIIEPGRSLVGDAGVLEA 266 Query: 289 KVI-SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 +V+ KKS D+ + + + F I P + GP C++ Sbjct: 267 EVVLISKKSYDEDVRWVYLDIGKFGGLAETMDEAIKYRIQTPRDGEETAPVVLAGPTCDS 326 Query: 348 GDFIAL--NRKIAL-PRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 D + ++ + + GD + I TGAY S +N + + Sbjct: 327 ADILYEKAGYEMPVTLKVGDKVRILSTGAYTTSYSAVNFNGFAPLKAYFI 376 >gi|46190675|ref|ZP_00121234.2| COG0019: Diaminopimelate decarboxylase [Bifidobacterium longum DJO10A] Length = 518 Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 23/246 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ G HIGS I ++F A K + L + ++ + + ID+GGG +AY Sbjct: 272 ELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDS 331 Query: 251 PSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA------ 297 D + ++ G I EPGR++VA G+ + +V +IK Sbjct: 332 MDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHVHLSDAKD 391 Query: 298 -------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ +V +D M+D +RP LY A + + N G + A + G CE+GD Sbjct: 392 SAGNPIAERVYVSVDGGMSDNIRPALYGADY-TARLANRTGSAETMLARVCGMHCESGDI 450 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + GD+L + TGAYG + YN L+ + V+ S H++ R T + Sbjct: 451 VVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLRRQTVDD 510 Query: 410 LIELDS 415 L+ LD Sbjct: 511 LLNLDV 516 Score = 96.4 bits (238), Expect = 9e-18, Method: Composition-based stats. Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 8/179 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVC 56 M+A EGS+ + E L +P Y T + F + AF+ T V Sbjct: 1 MNA----EGSIEFHGRTAESLLDEFGSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVS 56 Query: 57 YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 +A KA ++ V++ + G +D + GE++ ALAA VP R+V G K+ +EI LA++ Sbjct: 57 FAGKAFLSKEVVRLVTEAGMFVDTCTMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIE 116 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 G ++ E + + A LGK+A + RV ++A H+ IST ++ KFG+P+ Sbjct: 117 QGFAKIVIDEPDEPERVAAIARRLGKRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPL 175 >gi|66045783|ref|YP_235624.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae B728a] gi|63256490|gb|AAY37586.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae B728a] Length = 397 Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 75/361 (20%), Positives = 127/361 (35%), Gaps = 19/361 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELR 87 FY I +N FS F G V YA+KAN V++ L+ G D+ S E++ Sbjct: 42 FYTVDPRWITQNAQQFSGCFPG---TVLYAMKANPLVHVLEALSQGGINHFDVASLAEVQ 98 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A + + + V + + G+ F ++SE EL L + Sbjct: 99 TVHNTLPNAVQYLMNPVKSRHCLHEAYYRHGVRSFVLDSEEELSKLRDVLPERDSTISMF 158 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R A + + P ++ A++ G+ H+GSQ + Sbjct: 159 VRY-----APSESTAVYDLRGKFGASPALATQLVHQVAASTDWS--LGLSFHVGSQAIED 211 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS--SDYASLIHQYFG 265 + A D +R +++H+D+GGG Y + I Sbjct: 212 GPWLAALD---DADAIVRDTAQHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCEHIQTSPT 268 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 +I E GR LV L +V+S ++ + + + + + A + Sbjct: 269 LKDLNLICEAGRGLVYGGMSLFARVLSRREHSVFCGAGIFGGLLSAQQWLQFPA--RVWR 326 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNS 384 P +I GP C++ D +A +A R GD L + TGAY +N Sbjct: 327 DAAPYAGSAEATFNIFGPTCDSMDRLAFPYSLASDIREGDWLEFQSTGAYSVSLRTPFNG 386 Query: 385 R 385 Sbjct: 387 F 387 >gi|317152607|ref|YP_004120655.1| carboxynorspermidine decarboxylase [Desulfovibrio aespoeensis Aspo-2] gi|316942858|gb|ADU61909.1| carboxynorspermidine decarboxylase [Desulfovibrio aespoeensis Aspo-2] Length = 396 Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 108/368 (29%), Gaps = 17/368 (4%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 V+TP + + N ++ V ALK + + LA G+ S Sbjct: 14 VKTPCFVVDEGLLRDNLDILASVRQRAGCKVLLALKCFAMHSTFPLLAPQLDGVCASSPH 73 Query: 85 E----LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E P V + + L S ++L L Sbjct: 74 EARLGCEEFAPHCRPGTGEVHTFAAGFSEADIRDLCQTSDHIVFNSFAQLDRFRPLVREL 133 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + A + IN + + G + + + A+ + Sbjct: 134 AEANGRAIELALRINPEHSEGATPIYDPCAPGSRLGIRRAHFDPANLDGV-------TGL 186 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + + + +++++ GGG I +I Sbjct: 187 HWHNLCEQDADCLERTVAAVEASFADVLPRMRYVNFGGGHHITRPGYDVDL----LVRII 242 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 ++ ++ LEPG + + G LVT V+ AD VI+D A+ M + Y Sbjct: 243 TRFKEKWGVEVYLEPGEAVALNAGYLVTTVLD-VIRADMDIVIMDSAVPCHMPDVIEMPY 301 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 GD+ I GP C GD P GD L Y V++ Sbjct: 302 RPHIVGSGEPGDKAW-TCRIGGPSCLAGDVAGEYSFDTPPMTGDRLVFTDMAIYSMVKTN 360 Query: 381 TYNSRLLI 388 T+N L Sbjct: 361 TFNGIQLP 368 >gi|148996988|ref|ZP_01824642.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP11-BS70] gi|168575583|ref|ZP_02721519.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae MLV-016] gi|194397835|ref|YP_002037557.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae G54] gi|307067577|ref|YP_003876543.1| diaminopimelate decarboxylase [Streptococcus pneumoniae AP200] gi|147756688|gb|EDK63728.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP11-BS70] gi|183578480|gb|EDT99008.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae MLV-016] gi|194357502|gb|ACF55950.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae G54] gi|306409114|gb|ADM84541.1| Diaminopimelate decarboxylase [Streptococcus pneumoniae AP200] Length = 375 Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 78/390 (20%), Positives = 129/390 (33%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDEDMEELLGITDHIVFNS----ERQLRKHGSRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY + Y V++ T Sbjct: 283 PPLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|307127526|ref|YP_003879557.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae 670-6B] gi|306484588|gb|ADM91457.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae 670-6B] gi|332075533|gb|EGI86001.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA17545] Length = 375 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 74/390 (18%), Positives = 129/390 (33%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDEDMEELLGITDHIVFNS----ERQLRKHGSRCREA 118 Query: 143 KAPIAFRVNPDINA-NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S + + + Sbjct: 119 GVSVGLRLNPQCSTQGAHALYDPCAPGSRFGVTIDKIPS-----------DLLDLVDGLH 167 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + L+++ +Q H ++ +++GGG I S I Sbjct: 168 FHTLCEQGADDLQTTLKEVEEQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY + Y V++ T Sbjct: 283 PPLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|218134538|ref|ZP_03463342.1| hypothetical protein BACPEC_02441 [Bacteroides pectinophilus ATCC 43243] gi|217989923|gb|EEC55934.1| hypothetical protein BACPEC_02441 [Bacteroides pectinophilus ATCC 43243] Length = 376 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 74/372 (19%), Positives = 133/372 (35%), Gaps = 9/372 (2%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSNQAVIKTL-AHLGSGLDIVS 82 TP Y EKN +AF+ G Y++K N + ++K A LG ++ VS Sbjct: 3 TPCYTIHLDIFEKNCREVMDAFEEAWGGRVEYGYSVKTNHDAGLMKYAHAKLGWFIETVS 62 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLAL-QSGIYCFNVESESELKTLNQRAVSLG 141 EL A AE I+F+G K + L G N+++ ++ + + + Sbjct: 63 PDELELAFNLGFDAENIIFNGPCKCSRQDALINAIRGGAYVNLDNLDDVSFVCRHVSDVR 122 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKISGVDMHI 200 + I RVN ++ A + + G+ +FGI + A G++ +G+ MH Sbjct: 123 DASRIGIRVNYNLEAECPGETTAGESVSRFGIDVENKDFARAVDMLRSAGIEPAGLHMHT 182 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 ++ F + L H + G + + Sbjct: 183 STRSRSAAVFTSLARKAAQLVNDYGLKLHFVDMGGGYFGGQKVEGKPSMEQYAQVITREL 242 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM-NDFMRPTLYDA 319 + +ILEPG ++A T V+S++ V +D + + + Sbjct: 243 KKALNPEMTTLILEPGASVIATSVTYETSVLSVRDIRGTKIVTMDGTLLHVNPFMAHRNQ 302 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + + I + + H I G C D A + PGD+L GAY + Sbjct: 303 PYSTSLIADYDARPVDEHQIICGCTCMENDRFADEHSVRRLEPGDVLSFRFAGAYTMAFN 362 Query: 380 GTYNSRLLIPEI 391 + + E+ Sbjct: 363 SNF--IVNPAEV 372 >gi|289617669|emb|CBI61392.1| unnamed protein product [Sordaria macrospora] Length = 483 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 82/395 (20%), Positives = 141/395 (35%), Gaps = 53/395 (13%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L + + YA+K N + +++ LA LG+G D S+ E+ + Sbjct: 83 FFVADLGEVYRQHLRWKLNLPRVKP--FYAVKCNPDDRLLRLLAALGTGFDCASKAEIEQ 140 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ KT + Q G+ ++ EL+ + + I Sbjct: 141 VLRMGVDPSRIIYAQPCKTNSYVRYVAQQGVRQMTFDNADELRKIARLYPDAELFLRIL- 199 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG + L A L + GV H+GS Sbjct: 200 ---------TDDSSSLCRLSLKFGASLDSTDGLLGLARQLGLS-VVGVSFHVGSGASDPT 249 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA + + QQ + G+N++ +DVGGG + A+L + + Sbjct: 250 AFLKAVQDAHVVFQQAAAYGYNLKTLDVGGGFCSDDTFEQMASVLR--AALDEYFPAHTG 307 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADK------------------------TFVIL 304 +I EPGR+ + L +I+ + D V + Sbjct: 308 VNLIAEPGRYYASSAFTLACNIIARRTIQDGSAVSVSDSSSSMSDDGSMNNGDASYMVYV 367 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAG-------------DRLHIHADIVGPICETGDFI 351 + + ++D H + I+ G I I GP C+ D I Sbjct: 368 NDGLYGNFSSIMFDHQHPVAKILRAGGRTMYDSVAAHESASEDAIEYSIWGPTCDGIDRI 427 Query: 352 ALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + GD LY E GAY + T+N Sbjct: 428 TESIRFREILDVGDWLYFEDMGAYTKCSATTFNGF 462 >gi|330998056|ref|ZP_08321884.1| carboxynorspermidine decarboxylase [Paraprevotella xylaniphila YIT 11841] gi|329569145|gb|EGG50936.1| carboxynorspermidine decarboxylase [Paraprevotella xylaniphila YIT 11841] Length = 396 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 61/415 (14%), Positives = 114/415 (27%), Gaps = 35/415 (8%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 F Y E V TP Y + +N + + A KA Sbjct: 4 DHFTY-------EGVP---------TPCYIIEEDLLRRNLEQIRDVSRRAGVEIILAFKA 47 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + S S E A + AE + + + Sbjct: 48 FALWKSFPVFREYISHTTASSLYE------ARLAAEEFGSKAHTYSPAYTERDFDRILSY 101 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 + + + + + S+ + + ++ + E P Sbjct: 102 SSHVTFNSMSQYARFYPSVEEYSR--LHPEERVSCGLRINPEYSEIEVDLYNPCAPGSRF 159 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 AS LP +G++ S L + ++ ++ +++GGG Sbjct: 160 GMMASQLPDSLPAGIEGF-HCHCHCESSSEALEHTLLHIEEKFGGWLSRLKWLNLGGGHL 218 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + A L +ILEPG G LV V+ + ++ Sbjct: 219 MTRKDYD---VERLVAILKGLKERYPNLTVILEPGSAFAWQTGPLVASVVDVVENKGIRT 275 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGD-------RLHIHADIVGPICETGDFIALN 354 ILDV+ M L Y + + G C +GD++ Sbjct: 276 AILDVSFTCHMPDCLEMPYQPVVRNAETMEPDAVRRAAPEENVYRLGGNSCLSGDYMGAW 335 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 R GD + E Y V++ +N M++ R ++++ Sbjct: 336 RFGHPLASGDRIIFEDMIHYTTVKTNMFNGIRHPDIAMLHSDGTLEYYRRFSYED 390 >gi|306825224|ref|ZP_07458566.1| carboxynorspermidine decarboxylase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432660|gb|EFM35634.1| carboxynorspermidine decarboxylase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 375 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 76/390 (19%), Positives = 125/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLETNCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDADLEELLEITDHIVFNS----ERQLRKHGPRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I R+NP + H +FG+ +I S L V Sbjct: 119 GISIGLRLNPQCSTQGDHALYDPCAPGSRFGVTSDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E+ KA + Q S H ++ +++GGG I S I Sbjct: 174 QGADDLETTLKAVE------AQFGSYLHEVKWLNMGGGHHITREDYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ +EPG +V + G L T+V+ I ++ +++ A P + + + Sbjct: 224 RIQETYNLEVYIEPGEAIVLNAGYLATEVLDIVENG--MEILVLDASATCHMPDVLEMPY 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + C TGD I GD LY E Y V++ T Sbjct: 282 RPPLRNGFEAKEKAHTYRLSSNTCLTGDVIGDYSFENPVEIGDRLYFEDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGNCSLV-KAFGYQDF 370 >gi|149006405|ref|ZP_01830117.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP18-BS74] gi|147762182|gb|EDK69144.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP18-BS74] Length = 375 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 78/390 (20%), Positives = 128/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L FN E + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDADLEELLEIMDHIVFNS----ERQLRKHGPRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY + Y V++ T Sbjct: 283 PSLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|85373776|ref|YP_457838.1| diaminopimelate/ornithine decarboxylase [Erythrobacter litoralis HTCC2594] gi|84786859|gb|ABC63041.1| diaminopimelate/ornithine decarboxylase [Erythrobacter litoralis HTCC2594] Length = 400 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 63/369 (17%), Positives = 115/369 (31%), Gaps = 14/369 (3%) Query: 33 STTAIEKNYLTFSNAF----DGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELR 87 I A + V YA+KAN + +++ L G D+ S E+R Sbjct: 17 DEPVILNRPHAAQRAARFFVEKFPGKVLYAVKANPSPDLLQILRASGVTHYDVASIAEVR 76 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A A V + Q G+ F++++E EL + + Sbjct: 77 LVRDALPDAVLCFMHPVKTPRAIAEAYHQHGVRTFSLDTEEELAKIVEACSDAQGNPAKD 136 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 ++ I ++ S KFG + + +L A GV H+GSQ Sbjct: 137 LKLCVRIRVSSD--YSELSLASKFGCDLTEAPALLQLARQ--HCDWLGVCFHVGSQAMTP 192 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ +A + +R I + + Sbjct: 193 FAYVQAIERVRAAIADASVVIDMIDVGGGFPSVYPGMEPPPLEDYFAIIHKHFEALPIAY 252 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 ++ EPGR L A+ L +V + A+ D + + + Sbjct: 253 NAELWCEPGRALCAEYSSLTVRVDKRRGEELYINDGAYGALYDAA----HVGWKFPVRAL 308 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + + GP C+ D++ + + GD + + GAYGA +N Sbjct: 309 EDDLIKPDMPFAFYGPTCDDADYMEGPFNLPEDIQAGDYIEVGMLGAYGAAMKTGFNGFG 368 Query: 387 LIPEIMVNG 395 +I+V Sbjct: 369 NAEQIVVED 377 >gi|94985418|ref|YP_604782.1| carboxynorspermidine decarboxylase [Deinococcus geothermalis DSM 11300] gi|94555699|gb|ABF45613.1| carboxynorspermidine decarboxylase [Deinococcus geothermalis DSM 11300] Length = 408 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 43/392 (10%), Positives = 99/392 (25%), Gaps = 27/392 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 + +P + + + +N S + A K + +V L G G Sbjct: 20 KAIPSPAFVLDESRLRRNLALISAVQRASGAQIIVAFKGFAMWSVFPLLREYGITGATAS 79 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E + E V++ D + + FN ++ E Q + Sbjct: 80 SLNE-AILAREELQGEVHVYAPAYSEEDFPRILDLADHIVFNSFAQWERFRP-QVEAARA 137 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + + + + + + + G+ + Sbjct: 138 AGKALHVGLRINPEYAEVETDLYNPAGPFSRLGVTRREFRPELLDGIDGLHFHTLCE--- 194 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + L + + ++ ++ GGG + ++ Sbjct: 195 ------KDSDTLERTLEVVERNFGEFLPRMRWVNFGGGHLMTREG----YDLERLVRVVR 244 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +ILEPG G LV+ V+ + + ++ Sbjct: 245 AFREKWDVHVILEPGSAFGWQTGWLVSSVLDVIHNVKDIAILDISVSAHMPDVLEMPYRP 304 Query: 322 E----------INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 I G C GD + GD + + Sbjct: 305 RILGARDPGEGQETHREAHDVPPGFPYIIGGTTCLAGDVVGEYVFDQPLNVGDRVVFDDM 364 Query: 372 GAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIR 402 Y V++ +N I+ + ++ Sbjct: 365 IHYTMVKTTFFNGVKHPDIGILHRDGTYERVK 396 >gi|170721307|ref|YP_001748995.1| carboxynorspermidine decarboxylase [Pseudomonas putida W619] gi|169759310|gb|ACA72626.1| carboxynorspermidine decarboxylase [Pseudomonas putida W619] Length = 365 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 54/388 (13%), Positives = 114/388 (29%), Gaps = 31/388 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y T + N + + ALK + +V + G S EL Sbjct: 4 TPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ S +L+ +++ + + Sbjct: 64 KLGRQ-KFAGETHAYSVAWADDEVEEMLE--NCDKIIFNSIGQLQRFAEKSEGKVRGLRV 120 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 +V+ + P L + IS + + + Sbjct: 121 NPQVSS--------------SDYLLADPARPFSRLGEWDPEKIEKVISQISGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F K+L + ++ H ++ + +GGG+ H + + + + + Sbjct: 167 NGDFGLFDKMLTHIEERFGHLLHKVEWVSLGGGI----HFTGEDYAVDAFCARLKAFSQT 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + + L V+ + V+ + +Y Sbjct: 223 YGVQVYLEPGEAAITNSASLEVTVLDTLYNGKNLAVVDSSIEAHLLDLLIY------RLN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A + + G C GD + GD L T Y V+ +N Sbjct: 277 AKMAPNDGEHTYMVCGKSCLAGDIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLK 336 Query: 387 LIPEIMVN--GSQFHIIRPRMTFQELIE 412 + I V ++R F++ + Sbjct: 337 MPS-IAVKQLDGSVEVVRE-FGFEDYVS 362 >gi|317478905|ref|ZP_07938053.1| carboxynorspermidine decarboxylase [Bacteroides sp. 4_1_36] gi|316904939|gb|EFV26745.1| carboxynorspermidine decarboxylase [Bacteroides sp. 4_1_36] Length = 381 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 57/386 (14%), Positives = 114/386 (29%), Gaps = 20/386 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 +P Y + KN + D + A K+ + S Sbjct: 9 FPSPCYIMEEGLLRKNLALIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVY 68 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R A + T + ++ S S+ V+ G Sbjct: 69 EARLA--LEEFGSKAHTYSPAYTEADFPEIMRC-SSHITFNSLSQFHRFYPVVVAEGSGI 125 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 R+NP+ + + + +FG+ + ++ Sbjct: 126 SCGIRINPEYSEVETELYNPCAPGTRFGVMADPLPE-----------ELPVGIEGFHCHC 174 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 S ++ L L + I+ +++GGG + L Sbjct: 175 HCESSSYELEHTLEHLEGKFSRWFSQIKWLNLGGGHLMTRKDYDVEHLVRLLQGLK---G 231 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +IILEPG G+L ++++ I ++ IL+V+ M L Y Sbjct: 232 RYSHLQIILEPGSAFTWQTGVLSSEIVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAV 291 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 GD + G C +GD++ L + G+ + E Y V++ +N Sbjct: 292 RGAEM-GDAGPYVYRLGGNSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTTVKTNMFNG 350 Query: 385 RLLIPEIMV-NGSQFHIIRPRMTFQE 409 M + + + ++++ Sbjct: 351 IHHPAIAMWTKEGKAEVFKQ-FSYED 375 >gi|329888519|ref|ZP_08267117.1| lysine/ornithine decarboxylase [Brevundimonas diminuta ATCC 11568] gi|328847075|gb|EGF96637.1| lysine/ornithine decarboxylase [Brevundimonas diminuta ATCC 11568] Length = 398 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 110/349 (31%), Gaps = 12/349 (3%) Query: 49 DGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGELRRALAAPVPAERIVFSGVGKT 107 D + V YA+KAN ++ +I+ L G D+ S E+ + A V Sbjct: 15 DNLKADVFYAVKANPSRWIIEVLVENGVNAFDVASLAEIELVRSVSPNARLAFMHPVKSR 74 Query: 108 IDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK 167 G+ F ++S EL + + S G + V ++A+ Sbjct: 75 GAIKAAYADHGVRTFVLDSHDELDKILE---STGHADDLNLIVRMGVSADGAAY----SL 127 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 KFG+ Q +L GV H+GSQ + ++ A + ++ Sbjct: 128 SGKFGVSPDQAPALLQATRHAVKDGQMGVSFHVGSQCMRPSAYEAAMTQVGRAIKKAGVF 187 Query: 228 GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 + + + ++ + ++ EPGR LVA+ ++ Sbjct: 188 VDIVDVGGGFPSVYPGMVPPDLSEYADAIHRGFNEMPVSETTELWCEPGRALVAEASSVL 247 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 +V + D + T + + GP C++ Sbjct: 248 CRV---DLRKGDALYLNDGSYGSLFDATHSRWPFPTKLVRDGESSSELKPYRFYGPTCDS 304 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 D + + + GD + I GAYG S +N V Sbjct: 305 IDHMPGPFWLPADVQEGDFIEIGMMGAYGVAMSTGFNGYGEHEIAAVED 353 >gi|317482967|ref|ZP_07941971.1| diaminopimelate decarboxylase [Bifidobacterium sp. 12_1_47BFAA] gi|316915574|gb|EFV36992.1| diaminopimelate decarboxylase [Bifidobacterium sp. 12_1_47BFAA] Length = 530 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 23/246 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ G HIGS I ++F A K + L + ++ + + ID+GGG +AY Sbjct: 284 ELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDS 343 Query: 251 PSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA------ 297 D + ++ G I EPGR++VA G+ + +V +IK Sbjct: 344 MDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHVHLSDAKD 403 Query: 298 -------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ +V +D M+D +RP LY A + + N G + A + G CE+GD Sbjct: 404 SDGNPIAERVYVSVDGGMSDNIRPALYGADY-TARLANRTGSAETMLARVCGMHCESGDI 462 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + GD+L + TGAYG + YN L+ + V+ S H++ R T + Sbjct: 463 VVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLRRQTVDD 522 Query: 410 LIELDS 415 L+ LD Sbjct: 523 LLNLDV 528 Score = 99.9 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 +G++ + E L +P Y T + F + AF+ T V +A KA Sbjct: 16 DGAITFHGRTAESLLDEFGSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFL 75 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ +++ +A G +D + GE++ ALAA VP R+V G K+ +EI LA++ G Sbjct: 76 SKEIVRLVAEAGMFVDTCTMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIV 135 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 ++ E + + A LGK+A + RV ++A H+ IST ++ KFG+P+ Sbjct: 136 IDEPDEPERVAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPL 187 >gi|312133790|ref|YP_004001129.1| lysa [Bifidobacterium longum subsp. longum BBMN68] gi|311773073|gb|ADQ02561.1| LysA [Bifidobacterium longum subsp. longum BBMN68] Length = 530 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 23/246 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ G HIGS I ++F A K + L + ++ + + ID+GGG +AY Sbjct: 284 ELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDS 343 Query: 251 PSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA------ 297 D + ++ G I EPGR++VA G+ + +V +IK Sbjct: 344 MDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHVHLSDAKD 403 Query: 298 -------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ +V +D M+D +RP LY A + + N G + A + G CE+GD Sbjct: 404 SDGNPIAERVYVSVDGGMSDNIRPALYGADY-TARLANRTGSAETMLARVCGMHCESGDI 462 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + GD+L + TGAYG + YN L+ + V+ S H++ R T + Sbjct: 463 VVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLRRQTVDD 522 Query: 410 LIELDS 415 L+ LD Sbjct: 523 LLNLDV 528 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 EGS+ + E L +P Y T + F + AF+ T V +A KA Sbjct: 16 EGSIEFHGRTAESLLDEFGSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFL 75 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ V++ + G +D + GE++ ALAA VP R+V G K+ +EI LA++ G Sbjct: 76 SKEVVRLVTEAGMFVDTCTMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIV 135 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 ++ E + + A LGK+A + RV ++A H+ IST ++ KFG+P+ Sbjct: 136 IDEPDEPERVAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPL 187 >gi|307301480|ref|ZP_07581240.1| carboxynorspermidine decarboxylase [Sinorhizobium meliloti BL225C] gi|306903537|gb|EFN34125.1| carboxynorspermidine decarboxylase [Sinorhizobium meliloti BL225C] Length = 365 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 46/389 (11%), Positives = 109/389 (28%), Gaps = 39/389 (10%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + +N ++ + ALK + +V + G S E+ Sbjct: 4 TPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEV 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + + ++E+ + A + + Sbjct: 64 RLGR---------------------ERFGKETHAYSVAYGDNEIDDVVSHADKIIFNSIS 102 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD----MHIGS 202 D A + + + + ++ K+ V + Sbjct: 103 QLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVMDRINGFMIH 162 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + F ++L ++ ++ + + + +GGG+ H +++ + Sbjct: 163 NNCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGGI----HFTGDDYPVDAFSARLRA 218 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG + L V+ + ++ + +Y Sbjct: 219 FSDRYGVQIYLEPGEASITKSTTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIY----- 273 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + I G C GD R + GD + + Y V+ + Sbjct: 274 -RETAKVLPNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWF 332 Query: 383 NSRLLIPEIMVN--GSQFHIIRPRMTFQE 409 N + I + +R T+ + Sbjct: 333 NGVKMPA-IAIRELDGSVRTVRE-FTYAD 359 >gi|239620903|ref|ZP_04663934.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|322690013|ref|YP_004209747.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis 157F] gi|239516164|gb|EEQ56031.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|320461349|dbj|BAJ71969.1| putative diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis 157F] Length = 518 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 23/246 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ G HIGS I ++F A K + L + ++ + + ID+GGG +AY Sbjct: 272 ELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDS 331 Query: 251 PSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA------ 297 D + ++ G I EPGR++VA G+ + +V +IK Sbjct: 332 MDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHVHLSDAKD 391 Query: 298 -------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ +V +D M+D +RP LY A + + N G + A + G CE+GD Sbjct: 392 SDGNPIAERVYVSVDGGMSDNIRPALYGADY-TARLANRTGSAETMLARVCGMHCESGDI 450 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + GD+L + TGAYG + YN L+ + V+ S H++ R T + Sbjct: 451 VVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLRRQTVDD 510 Query: 410 LIELDS 415 L+ LD Sbjct: 511 LLNLDV 516 Score = 96.0 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 8/179 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVC 56 M+A EGS+ + E L +P Y T + F + AF+ T V Sbjct: 1 MNA----EGSIEFHGRTAESLLDEFGSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVS 56 Query: 57 YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 +A KA ++ V++ + G +D + GE++ ALAA VP R+V G K+ +EI LA++ Sbjct: 57 FAGKAFLSKEVVRLVTEAGMFVDTCTMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIE 116 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 G ++ E + + A LGK+A + RV ++A H+ IST ++ KFG+P+ Sbjct: 117 QGFAKIVIDEPDEPERVAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPL 175 >gi|227547000|ref|ZP_03977049.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212532|gb|EEI80421.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 532 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 23/246 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ G HIGS I ++F A K + L + ++ + + ID+GGG +AY Sbjct: 286 ELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDS 345 Query: 251 PSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA------ 297 D + ++ G I EPGR++VA G+ + +V +IK Sbjct: 346 MDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHVHLSDAKD 405 Query: 298 -------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ +V +D M+D +RP LY A + + N G + A + G CE+GD Sbjct: 406 SDGNPIAERVYVSVDGGMSDNIRPALYGADY-TARLANRTGSAETMLARVCGMHCESGDI 464 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + GD+L + TGAYG + YN L+ + V+ S H++ R T + Sbjct: 465 VVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLRRQTVDD 524 Query: 410 LIELDS 415 L+ LD Sbjct: 525 LLNLDV 530 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 +G++ + E L +P Y T + F + AF+ T V +A KA Sbjct: 18 DGAITFHGRTAESLLDEFGSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFL 77 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ +++ + G +D + GE++ ALAA VP R+V G K+ +EI LA++ G Sbjct: 78 SKEIVRLVTEAGMFVDTCTMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIV 137 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 ++ E + + A LGK+A + RV ++A H+ IST ++ KFG+P+ Sbjct: 138 IDEPDEPERVAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPL 189 >gi|23465835|ref|NP_696438.1| diaminopimelate decarboxylase [Bifidobacterium longum NCC2705] gi|23326532|gb|AAN25074.1| probable diaminopimelate decarboxylase [Bifidobacterium longum NCC2705] Length = 530 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 23/246 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ G HIGS I ++F A K + L + ++ + + ID+GGG +AY Sbjct: 284 ELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDS 343 Query: 251 PSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA------ 297 D + ++ G I EPGR++VA G+ + +V +IK Sbjct: 344 MDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHVHLSDAKD 403 Query: 298 -------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ +V +D M+D +RP LY A + + N G + A + G CE+GD Sbjct: 404 SDGNPIAERVYVSVDGGMSDNIRPALYGADY-TARLANRTGSAETMLARVCGMHCESGDI 462 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + GD+L + TGAYG + YN L+ + V+ S H++ R T + Sbjct: 463 VVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLRRQTVDD 522 Query: 410 LIELDS 415 L+ LD Sbjct: 523 LLNLDV 528 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 EGS+ + E L +P Y T + F + AF+ T V +A KA Sbjct: 16 EGSIEFHGRTAESLLDEFGSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFL 75 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ V++ + G +D + GE++ ALAA VP R+V G K+ +EI LA++ G Sbjct: 76 SKEVVRLVTEAGMFVDTCTMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIV 135 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 ++ E + + A LGK+A + RV ++A H+ IST ++ KFG+P+ Sbjct: 136 IDEPDEPERVAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPL 187 >gi|12018238|ref|NP_072107.1| antizyme inhibitor 1 [Rattus norvegicus] gi|13431728|sp|Q63764|AZIN1_RAT RecName: Full=Antizyme inhibitor 1; Short=AZI; AltName: Full=Ornithine decarboxylase antizyme inhibitor gi|1304190|dbj|BAA09365.1| antizyme inhibitor [Rattus norvegicus] gi|2641954|dbj|BAA23594.1| antizyme inhibitor [Rattus norvegicus] Length = 448 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 74/361 (20%), Positives = 120/361 (33%), Gaps = 30/361 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G ++ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYMVKCNSTPAVLEILAALGTGFACSTKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I+++ K +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIYTSPCKQASQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I KFG + L A L +I GV HI S + + Sbjct: 157 ---------TEDNIGGEDGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHISSACKEYQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +D+GGG L + Sbjct: 207 VYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVIS-PLLDIYFPEGSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT----------------FVILDVAMNDFM 312 +II EPG + V+ L +I+ K + + + D F Sbjct: 266 IQIISEPGSYYVSSAFTLAVNIIAKKVVENDKLSSGVEKNGSDEPAFVYYMNDGVYGSFA 325 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 D D + + GP C+ D I + + GD L + G Sbjct: 326 SKLSEDLNTVPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELSVGDWLIFDNMG 385 Query: 373 A 373 A Sbjct: 386 A 386 >gi|307706572|ref|ZP_07643379.1| carboxynorspermidine decarboxylase [Streptococcus mitis SK321] gi|307618027|gb|EFN97187.1| carboxynorspermidine decarboxylase [Streptococcus mitis SK321] Length = 375 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 80/390 (20%), Positives = 130/390 (33%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + A Sbjct: 64 LYEAKLARE-EFPGEIHVFAPAFKDADLEELLEITDHIVFNS----ERQLRKHGARCRDA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ + +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDL-----LELVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + Q S H+++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------AQFGSYLHHVKWLNMGGGHHIIREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRETYNLEIYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY E Y V++ T Sbjct: 283 PPLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFEDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLV-KAFGYQDF 370 >gi|225854427|ref|YP_002735939.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae JJA] gi|225723651|gb|ACO19504.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae JJA] Length = 375 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 79/390 (20%), Positives = 129/390 (33%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + A Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDEDMEELLGITDHIVFNS----ERQLRKHGARCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY + Y V++ T Sbjct: 283 PSLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|332305132|ref|YP_004432983.1| carboxynorspermidine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172461|gb|AEE21715.1| carboxynorspermidine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 379 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 57/386 (14%), Positives = 119/386 (30%), Gaps = 23/386 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 +P Y +E N + ALK S + + G + E Sbjct: 11 PSPCYVCEEAKLEANLQLMQRVQQESGVEIILALKGFSMWSTFDLVKQYLQGSTASAVWE 70 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 R +++ +ID + + + S + + ++ Sbjct: 71 ARLGK--EEIGKQVHAFSPAYKPADIDQLVDL-VDHISFNSFGQWNRYKSQILASNVSPG 127 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I + +FGI A L +SG++ + Sbjct: 128 IRLNAQH--REAETELYDPSAPGSRFGI----------LAKDLKDADLSGLEGFHIHNLC 175 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + +SF + + + ++ I+ I+ GGG + + + ++ Sbjct: 176 ECDSFA-TERTILAVEEKFGQYFGQIKWINFGGGHLMTKEGYDVEHLITTLRAFKARHPH 234 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 +ILEPG + G L+ +VI I ++ DK ++ P + + + Sbjct: 235 L---NVILEPGSAVAWQTGPLICEVIDIVENRDKIAIVD--MSATAHMPDVLEMPYRPEV 289 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + G C TGD I L + G+ + E Y V++ +N Sbjct: 290 RGAGKANEKAFTYRFGGNSCLTGDAIDLYSFDHELQIGERIIFEDMIHYTMVKTTFFNGV 349 Query: 386 LLIPE-IMVNGSQFHIIRPRMTFQEL 410 I+ +F ++R +++ Sbjct: 350 EHPSIGILRKNGEFELVRKFE-YEDF 374 >gi|17987872|ref|NP_540506.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|225851878|ref|YP_002732111.1| carboxynorspermidine decarboxylase [Brucella melitensis ATCC 23457] gi|256044058|ref|ZP_05446969.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str. Rev.1] gi|256264609|ref|ZP_05467141.1| orn/DAP/Arg decarboxylase [Brucella melitensis bv. 2 str. 63/9] gi|260563419|ref|ZP_05833905.1| orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis bv. 1 str. 16M] gi|265990472|ref|ZP_06103029.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str. Rev.1] gi|17983604|gb|AAL52770.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str. 16M] gi|225640243|gb|ACO00157.1| carboxynorspermidine decarboxylase [Brucella melitensis ATCC 23457] gi|260153435|gb|EEW88527.1| orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis bv. 1 str. 16M] gi|263001256|gb|EEZ13831.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str. Rev.1] gi|263094973|gb|EEZ18681.1| orn/DAP/Arg decarboxylase [Brucella melitensis bv. 2 str. 63/9] gi|326408376|gb|ADZ65441.1| carboxynorspermidine decarboxylase [Brucella melitensis M28] gi|326538091|gb|ADZ86306.1| carboxynorspermidine decarboxylase [Brucella melitensis M5-90] Length = 365 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 115/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T +++N + + ALK + +V ++ G S E Sbjct: 3 QTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSLNE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 63 VRLGHE-KFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERF------ADKASGIK 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP +++++ P L + + + + Sbjct: 116 RGLRLNPGVSSSSFD----------LADPARPFSRLGEWDVAKVENVMDRITGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L D+ ++ S H ++ + +GGG+ H + + + + Sbjct: 166 ENSDFSLFDRMLSDIEEKFGSLLHRVEWVSLGGGI----HFTGEDYPVDAFCARLKSFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KFGVQVYLEPGEASITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD GD L E Y V+ +N Sbjct: 276 KAKMAPNNGGHSYMVCGKSCLAGDIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V ++R + + Sbjct: 336 KMPA-IAVRELDGTVKLVRE-FDYADF 360 >gi|306842400|ref|ZP_07475054.1| carboxynorspermidine decarboxylase [Brucella sp. BO2] gi|306287464|gb|EFM58937.1| carboxynorspermidine decarboxylase [Brucella sp. BO2] Length = 365 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 116/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T +++N + + ALK + +V ++ G S E Sbjct: 3 QTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSLNE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 63 VRLGHE-KFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERF------ADKASGIK 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP +++++ P L + ++ + + Sbjct: 116 RGLRLNPGVSSSSFD----------LADPARPFSRLGEWDVAKVEKVMNRITGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L D+ ++ S H ++ + +GGG+ H + + + + Sbjct: 166 ENSDFSLFDRMLSDIEEKFGSLLHRVEWVSLGGGI----HFTGEDYPVDAFCARLKSFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KFGVQVYLEPGEASITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD GD L E Y V+ +N Sbjct: 276 KAKMAPNNGGHSYMVCGKSCLAGDIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V ++R + + Sbjct: 336 KMPA-IAVRELDGTVKLVRE-FDYADF 360 >gi|225856584|ref|YP_002738095.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae P1031] gi|225725236|gb|ACO21088.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae P1031] Length = 375 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 78/390 (20%), Positives = 128/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L FN E + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDADLEELLEIMDHIVFNS----ERQLRKHGPRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 +D +++ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGVDDLQTTLKAVE------EQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY + Y V++ T Sbjct: 283 PSLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|167749127|ref|ZP_02421254.1| hypothetical protein EUBSIR_00071 [Eubacterium siraeum DSM 15702] gi|167657900|gb|EDS02030.1| hypothetical protein EUBSIR_00071 [Eubacterium siraeum DSM 15702] Length = 392 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 68/396 (17%), Positives = 118/396 (29%), Gaps = 22/396 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TP Y +++N + D + A KA S + ++ SG Sbjct: 8 INKTDTPCYVTEECYLKRNCEILKSVQDMTGCKILLAQKAFSMYSTYPLISGYLSGTTAS 67 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E R E VFS + +L +G + FN + L + Sbjct: 68 GLYEARLGYEYFGN-ETHVFSPAYTDKEINELVKYAGHFVFNSIRQFALHRDAVKDKHCL 126 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + F H+ + G + +I G+ H Sbjct: 127 IRVNPRFSTQ-----EGHEIYDPCAPGSRLGQTLASFEEDIKRYGKEILDEIDGLHFHTL 181 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + + A ++ Q + I+ GGG I +I+ Sbjct: 182 CEQNSDDLKRTAKEVEV----QFGKYLDKMSVINFGGGHHITRDD----YDIDTLVEVIN 233 Query: 262 QYFGNLQCKIILEPGRFLVADVGI---LVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + ++ LEPG + + G V VI K + + ILD + M L Sbjct: 234 HFKNEYGLEVYLEPGEAVALNAGFLVTTVLDVIDGKVNGEDDIAILDASAACHMPDVLEM 293 Query: 319 AYHEINYIVNPAGDRLH----IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 Y + N + + G C GD I +PGD L + Y Sbjct: 294 PYRPVIIQPNGNIAGEKGERAVTVRLGGNTCLAGDVIGDYSFDEPLKPGDRLVLCDMSIY 353 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 V++ T+N L IR ++++ Sbjct: 354 SMVKNNTFNGMALPSIYYNTSLGMREIRE-FSYEDF 388 >gi|332829256|gb|EGK01910.1| carboxynorspermidine decarboxylase [Dysgonomonas gadei ATCC BAA-286] Length = 380 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 109/386 (28%), Gaps = 17/386 (4%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P + + KN + + + A KA + + S Sbjct: 6 KVPSPCFVMEEELLRKNLSLIKSVKERAGVNIILAFKAFAMWKSFPIIREYIPYSTASSV 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E + A FS + S FN S+ E Sbjct: 66 FEAQLAYEEMGSLAHT-FSPAYTPDNFPVFMRYSSHITFNSLSQYERFYPETLKHRKKVS 124 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 I + + + + G+P+ G ++ + Sbjct: 125 CGIRINPEYSV--VETDLYNPATPDSRLGVPVSHF-----------GDELPEGVEGLHFH 171 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S + K L + ++ I+ +++GGG + + S +Y Sbjct: 172 TLCESSSYDLEKTLEQVEKKFGHFLPKIKWLNMGGGHLMTREDYDVEHLINLLLSFKAKY 231 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +I +EPG G+LV+ V+ I + ILDV+ M L Y Sbjct: 232 PNL---EITMEPGSAFAWQTGVLVSTVVDIVDNGGIKTAILDVSFACHMPDCLEMPYKPY 288 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + G C +GDFI GD + E Y V++ +N Sbjct: 289 IRGAYHEPVKGLPTYRMGGSSCLSGDFIGEWSFDEPLLIGDRIIFEDMIHYTTVKTTMFN 348 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 + N I +++ Sbjct: 349 GISHPAIALWNKYNQLEIYREFDYED 374 >gi|254579054|ref|XP_002495513.1| ZYRO0B13112p [Zygosaccharomyces rouxii] gi|238938403|emb|CAR26580.1| ZYRO0B13112p [Zygosaccharomyces rouxii] Length = 443 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 79/378 (20%), Positives = 138/378 (36%), Gaps = 37/378 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + YA+K N + V++ LA LG D S+ E+ + Sbjct: 68 FFVCDIGEVGRLHKNWFRELPR--VQPYYAVKCNPDAKVLRKLADLGVNFDCASKSEIEK 125 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V ERI+++ K I A + + ++ EL + + IA Sbjct: 126 VLAMGVNPERIIYANPCKASSFIRYAAGAKVLKSTFDNVEELHKIKKYHPDSQLLLRIA- 184 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + K+G + ++ +L L + + GV H+GS Sbjct: 185 ---------TDDSTAQCRLSTKYGCEMEKVDTLLQCVKDLG-LNLVGVSFHVGSGASDFT 234 Query: 209 SFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 S + A K R + + N++ +DVGGG + D S + Sbjct: 235 SLYTAVKDSRTVFDRAQDFGLSNLKLLDVGGGFQLESFHDSSAVLRSAL---DEFFPQGC 291 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKK-SADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 II EPGR+ A L VI+ +K S++++ + ++ + M L+D Sbjct: 292 GIDIIAEPGRYFAATTFTLAANVIAKRKLSSNESMLYINDGVYGNMNCILFDHQEPTPRT 351 Query: 327 VNPAGD------------------RLHIHADIVGPICETGDFIALNRKI-ALPRPGDLLY 367 + G+ + I GP C+ D I I PGD ++ Sbjct: 352 LYHNGEFYYYDFNSTSPRSFQKGFQYPQKVSIWGPTCDGLDCITKEYYIKHDLVPGDWIF 411 Query: 368 IEKTGAYGAVQSGTYNSR 385 GAY A + +N Sbjct: 412 FPSLGAYAASAATPFNGF 429 >gi|148559900|ref|YP_001258372.1| carboxynorspermidine decarboxylase [Brucella ovis ATCC 25840] gi|148371157|gb|ABQ61136.1| carboxynorspermidine decarboxylase [Brucella ovis ATCC 25840] Length = 365 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 115/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T +++N + + ALK + +V ++ G S E Sbjct: 3 QTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSLNE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 63 VRLGHE-KFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERF------ADKASGIK 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP +++++ P L + + + + Sbjct: 116 RGLRLNPGVSSSSFD----------LADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L D+ ++ S H I+ + +GGG+ H + + + + Sbjct: 166 ENSDFSLFDRMLSDIEEKFGSLLHRIEWVSLGGGI----HFTGEDYPVDAFCARLKSFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KFGVQVYLEPGEASITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD GD L E Y V+ +N Sbjct: 276 KAKMAPNNGGHSYMVCGKSCLAGDIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V ++R + + Sbjct: 336 KMPA-IAVRELDGTVKLVRE-FDYADF 360 >gi|149002465|ref|ZP_01827399.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP14-BS69] gi|237651127|ref|ZP_04525379.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CCRI 1974] gi|237821875|ref|ZP_04597720.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CCRI 1974M2] gi|147759402|gb|EDK66394.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP14-BS69] gi|332076201|gb|EGI86667.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA41301] Length = 375 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 74/390 (18%), Positives = 129/390 (33%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDEDMEELLGITDHIVFNS----ERQLRKHGSRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S + + + Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPS-----------DLLDLVDGLH 167 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + L+++ +Q H ++ +++GGG I S I Sbjct: 168 FHTLCEQGADDLQTTLKEVEEQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY + Y V++ T Sbjct: 283 PPLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|62289327|ref|YP_221120.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 1 str. 9-941] gi|82699256|ref|YP_413830.1| carboxynorspermidine decarboxylase [Brucella melitensis biovar Abortus 2308] gi|163842622|ref|YP_001627026.1| carboxynorspermidine decarboxylase [Brucella suis ATCC 23445] gi|189023580|ref|YP_001934348.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus S19] gi|237814818|ref|ZP_04593816.1| carboxynorspermidine decarboxylase [Brucella abortus str. 2308 A] gi|254688645|ref|ZP_05151899.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 6 str. 870] gi|254693126|ref|ZP_05154954.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 3 str. Tulya] gi|254696768|ref|ZP_05158596.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 2 str. 86/8/59] gi|254701152|ref|ZP_05162980.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 5 str. 513] gi|254707928|ref|ZP_05169756.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis M163/99/10] gi|254709494|ref|ZP_05171305.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis B2/94] gi|254729677|ref|ZP_05188255.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 4 str. 292] gi|256030988|ref|ZP_05444602.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis M292/94/1] gi|256060478|ref|ZP_05450649.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella neotomae 5K33] gi|256256892|ref|ZP_05462428.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 9 str. C68] gi|260545919|ref|ZP_05821660.1| orn/DAP/Arg decarboxylase, family 2 [Brucella abortus NCTC 8038] gi|260754119|ref|ZP_05866467.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 6 str. 870] gi|260757339|ref|ZP_05869687.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 4 str. 292] gi|260761163|ref|ZP_05873506.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 2 str. 86/8/59] gi|260883144|ref|ZP_05894758.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 9 str. C68] gi|261213365|ref|ZP_05927646.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 3 str. Tulya] gi|261315417|ref|ZP_05954614.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis M163/99/10] gi|261317018|ref|ZP_05956215.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis B2/94] gi|261324471|ref|ZP_05963668.1| carboxynorspermidine decarboxylase [Brucella neotomae 5K33] gi|261751688|ref|ZP_05995397.1| carboxynorspermidine decarboxylase [Brucella suis bv. 5 str. 513] gi|265988055|ref|ZP_06100612.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis M292/94/1] gi|294851721|ref|ZP_06792394.1| carboxynorspermidine decarboxylase [Brucella sp. NVSL 07-0026] gi|297247743|ref|ZP_06931461.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 5 str. B3196] gi|62195459|gb|AAX73759.1| NspC, carboxynorspermidine decarboxylase [Brucella abortus bv. 1 str. 9-941] gi|82615357|emb|CAJ10319.1| Orn/DAP/Arg decarboxylase, family 2:Carboxynorspermidine decarboxylase [Brucella melitensis biovar Abortus 2308] gi|163673345|gb|ABY37456.1| carboxynorspermidine decarboxylase [Brucella suis ATCC 23445] gi|189019152|gb|ACD71874.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus S19] gi|237789655|gb|EEP63865.1| carboxynorspermidine decarboxylase [Brucella abortus str. 2308 A] gi|260097326|gb|EEW81201.1| orn/DAP/Arg decarboxylase, family 2 [Brucella abortus NCTC 8038] gi|260667657|gb|EEX54597.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 4 str. 292] gi|260671595|gb|EEX58416.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 2 str. 86/8/59] gi|260674227|gb|EEX61048.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 6 str. 870] gi|260872672|gb|EEX79741.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 9 str. C68] gi|260914972|gb|EEX81833.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 3 str. Tulya] gi|261296241|gb|EEX99737.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis B2/94] gi|261300451|gb|EEY03948.1| carboxynorspermidine decarboxylase [Brucella neotomae 5K33] gi|261304443|gb|EEY07940.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis M163/99/10] gi|261741441|gb|EEY29367.1| carboxynorspermidine decarboxylase [Brucella suis bv. 5 str. 513] gi|264660252|gb|EEZ30513.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis M292/94/1] gi|294820310|gb|EFG37309.1| carboxynorspermidine decarboxylase [Brucella sp. NVSL 07-0026] gi|297174912|gb|EFH34259.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 5 str. B3196] Length = 365 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 115/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T +++N + + ALK + +V ++ G S E Sbjct: 3 QTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSLNE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 63 VRLGHE-KFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERF------ADKASGIK 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP +++++ P L + + + + Sbjct: 116 RGLRLNPGVSSSSFD----------LADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L D+ ++ S H ++ + +GGG+ H + + + + Sbjct: 166 ENSDFSLFDRMLSDIEEKFGSLLHRVEWVSLGGGI----HFTGEDYPVDAFCARLKSFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KFGVQVYLEPGEASITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD GD L E Y V+ +N Sbjct: 276 KAKMAPNNGGHSYMVCGKSCLAGDIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V ++R + + Sbjct: 336 KMPA-IAVRELDGTVKLVRE-FDYADF 360 >gi|311895101|dbj|BAJ27509.1| putative diaminopimelate decarboxylase [Kitasatospora setae KM-6054] Length = 460 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 90/410 (21%), Positives = 152/410 (37%), Gaps = 39/410 (9%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP Y Y + + A ++ Y+LKAN + V TLA LG ++ S G Sbjct: 30 YGTPLYLYDLDVVAAAHADLVAALPE-GAVIHYSLKANPHTEVAGTLAALGCRAEVSSTG 88 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ--------- 135 EL ALAA + +SG KT EI AL++G+ F+VES +L+ L + Sbjct: 89 ELDAALAAGFHPADVTYSGPAKTAAEIATALRAGVTRFSVESVRDLEVLEELADLADPAE 148 Query: 136 --------RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 G R+N D G KFG+ ++ + Sbjct: 149 SAESAGPGDPAGPGGVIECLLRINADRPVPGMGLAMAGV-STKFGVDFARVLATPEAFRD 207 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHS 246 V+I+G+ +++G+ + + F+ + + + G + +D+GGG G Y Sbjct: 208 RGRVRITGLHLYMGTNLPTEDVLLGQFEAGLAMCGELAAALGRDFAELDLGGGFGTPYAG 267 Query: 247 DHRPPSSSDYASLIHQYFGNLQCKI-------ILEPGRFLVADVGILVTKVISIKKSADK 299 P+ + + + E GR+LV G LVT V+ +K+S + Sbjct: 268 PGERPAYPGLRAGLEKLLDLHVPTWRTGGPAVSFESGRYLVGSCGTLVTTVVDVKESKGQ 327 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYI-----------VNPAGDRLHIHADIVGPICETG 348 + ++D ++ + V + GP+C Sbjct: 328 RYALVDSGIHHLGGLAGLRRLPPLRPGLLRLSGGGDPAVGREAGPDAGPVTVAGPLCTPL 387 Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQ 397 D + + R GDLL + TGAYG S + E++ + Sbjct: 388 DQWGSSSDLPPLRAGDLLAVPNTGAYGLTASLVGFLGYPAPVEVVTGSGR 437 >gi|291556836|emb|CBL33953.1| carboxynorspermidine decarboxylase [Eubacterium siraeum V10Sc8a] Length = 392 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 69/391 (17%), Positives = 116/391 (29%), Gaps = 22/391 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP Y + +N + D + A KA S + ++ SG E Sbjct: 13 TPCYVTEECYLRRNCEILKSVQDMTGCKILLAQKAFSMYSTYPLISGYLSGTTASGLYEA 72 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R E VFS + +LA +G + FN + L + + Sbjct: 73 RLGYEYFGN-ETHVFSPAYTDSEINELAKYAGHFVFNSIRQFALHRDAVKDKHCLIRVNP 131 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 F H+ + G + +I G+ H + + Sbjct: 132 RFSTQ-----EGHEIYDPCAPGSRLGQTLASFEEDIKRYGESILDEIDGLHFHTLCEQNS 186 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + A ++ Q + I+ GGG I +I+ + Sbjct: 187 DDLKRTAKEVEV----QFGKYLDKMSVINFGGGHHITRDD----YDIDTLVEVINHFKNE 238 Query: 267 LQCKIILEPGRFLVADVGI---LVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG + + G V VI K + + ILD + M L Y + Sbjct: 239 YGLEVYLEPGEAVALNAGFLVTTVLDVIDGKVNGEDDIAILDASAACHMPDVLEMPYRPV 298 Query: 324 NYIVNPAGDRLH----IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 N + + G C GD I +PGD L + Y V++ Sbjct: 299 IIQPNGNIAGEKGERAVTVRLGGNTCLAGDVIGDYSFDEPLKPGDRLVLCDMSIYSMVKN 358 Query: 380 GTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 T+N L IR ++ + Sbjct: 359 NTFNGMALPSIYYNTSLGMRKIRE-FSYDDF 388 >gi|23501241|ref|NP_697368.1| carboxynorspermidine decarboxylase [Brucella suis 1330] gi|161618317|ref|YP_001592204.1| carboxynorspermidine decarboxylase [Brucella canis ATCC 23365] gi|254703698|ref|ZP_05165526.1| carboxynorspermidine decarboxylase [Brucella suis bv. 3 str. 686] gi|260567050|ref|ZP_05837520.1| orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 4 str. 40] gi|261754341|ref|ZP_05998050.1| carboxynorspermidine decarboxylase [Brucella suis bv. 3 str. 686] gi|23347124|gb|AAN29283.1| carboxynorspermidine decarboxylase [Brucella suis 1330] gi|161335128|gb|ABX61433.1| carboxynorspermidine decarboxylase [Brucella canis ATCC 23365] gi|260156568|gb|EEW91648.1| orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 4 str. 40] gi|261744094|gb|EEY32020.1| carboxynorspermidine decarboxylase [Brucella suis bv. 3 str. 686] Length = 365 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 115/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T +++N + + ALK + +V ++ G S E Sbjct: 3 QTPYYLIDKTKLKRNMEKIAYVREKSGARALLALKCFATWSVFDLMSEYMDGTTSSSLNE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 63 VRLGHE-KFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERF------ADKASGIK 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP +++++ P L + + + + Sbjct: 116 RGLRLNPGVSSSSFD----------LADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L D+ ++ S H ++ + +GGG+ H + + + + Sbjct: 166 ENSDFSLFDRMLSDIEEKFGSLLHRVEWVSLGGGI----HFTGEDYPVDAFCARLKSFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KFGVQVYLEPGEASITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD GD L E Y V+ +N Sbjct: 276 KAKMAPNNGGHSYMVCGKSCLAGDIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V ++R + + Sbjct: 336 KMPA-IAVRELDGTVKLVRE-FDYADF 360 >gi|327481962|gb|AEA85272.1| carboxynorspermidine decarboxylase [Pseudomonas stutzeri DSM 4166] Length = 365 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 49/387 (12%), Positives = 100/387 (25%), Gaps = 29/387 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + N + + ALK + +V + G S EL Sbjct: 4 TPYYLIDKQKLLGNLEKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ FN + E Sbjct: 64 KLGRQ-KFAGETHAYSVAWADDEIEEMVANCDKIIFNSIGQLERFAEATEGTIR------ 116 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + P L + + + + + Sbjct: 117 ----------GLRVNPQVSSSDYLLADPARPFSRLGEWDPAKIEKVMGQISGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 SF K+L + ++ +Q + +GGG+ H + + + + Sbjct: 167 NSSFELFDKMLSTIEERFGHLLEQVQWVSLGGGI----HFTGEGYPLDAFCARLKAFSEK 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + L V+ + V+ + +Y Sbjct: 223 FGVQVYLEPGEAAITMSASLEVTVLDTLYNGKNLAVVDSSIEAHMLDLLIY------RLN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A + + G C GD + GD L Y V+ +N Sbjct: 277 AKMAPNDGEHSYMVCGKSCLAGDIFGEYQFDRPLAIGDRLSFIDAAGYTMVKKNWFNGLK 336 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQELIE 412 + ++ ++R F + + Sbjct: 337 MPSIVVKQLDGSVEVVRE-FDFNDYLS 362 >gi|16265298|ref|NP_438090.1| putative carboxynorspermidine decarboxylase protein [Sinorhizobium meliloti 1021] gi|307316795|ref|ZP_07596237.1| carboxynorspermidine decarboxylase [Sinorhizobium meliloti AK83] gi|15141438|emb|CAC49950.1| putative carboxynorspermidine decarboxylase protein [Sinorhizobium meliloti 1021] gi|306897417|gb|EFN28161.1| carboxynorspermidine decarboxylase [Sinorhizobium meliloti AK83] Length = 365 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 46/389 (11%), Positives = 109/389 (28%), Gaps = 39/389 (10%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + +N ++ + ALK + +V + G S E+ Sbjct: 4 TPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEV 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + + ++E+ + A + + Sbjct: 64 RLGR---------------------ERFGKETHAYSVAYGDNEIDEVVSHADKIIFNSIS 102 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD----MHIGS 202 D A + + + + ++ K+ V + Sbjct: 103 QLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVMDRINGFMIH 162 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + F ++L ++ ++ + + + +GGG+ H +++ + Sbjct: 163 NNCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGGI----HFTGDDYPVDAFSARLRA 218 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG + L V+ + ++ + +Y Sbjct: 219 FSDRYGVQIYLEPGEASITKSTTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIY----- 273 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + I G C GD R + GD + + Y V+ + Sbjct: 274 -RETAKVLPNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWF 332 Query: 383 NSRLLIPEIMVN--GSQFHIIRPRMTFQE 409 N + I + +R T+ + Sbjct: 333 NGVKMPA-IAIRELDGSVRTVRE-FTYAD 359 >gi|258543568|ref|YP_003189001.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-01] gi|256634646|dbj|BAI00622.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-01] gi|256637702|dbj|BAI03671.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-03] gi|256640756|dbj|BAI06718.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-07] gi|256643811|dbj|BAI09766.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-22] gi|256646866|dbj|BAI12814.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-26] gi|256649919|dbj|BAI15860.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-32] gi|256652909|dbj|BAI18843.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655963|dbj|BAI21890.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO 3283-12] Length = 437 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 78/373 (20%), Positives = 133/373 (35%), Gaps = 21/373 (5%) Query: 21 LAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA TP A+ Y A + YA+KAN Q +++ L LGS D Sbjct: 70 LAEQKPATPCLVLDVDAVADRYHALGKALPQ--ARIYYAVKANPAQPILRRLVELGSCFD 127 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S E+ L A + I F K + I A ++G+ F + EL+ L A Sbjct: 128 AASWEEVSLCLQAGASPDAISFGNTVKKVSAIRAAYEAGVRMFVFDCREELEKLAAHAPG 187 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + KFG + L A L + G+ H Sbjct: 188 SRVYCRLLVDNYGA----------EWPLSRKFGTTVESAKELMLAARELG-LDPYGLSFH 236 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 +GSQ E++ A L L + G +++ +++GGG I Y D A Sbjct: 237 VGSQQLSAEAYEVAIARAAALFTDLSAAGLDLRMVNLGGGFPIRYRDDVPEIDHFTTAIF 296 Query: 260 IHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 ++++EPGRF+V + G++ ++V+ + K + Sbjct: 297 RAMTEHFGNALPEMLVEPGRFIVGEAGVVRSEVVLVSARGRKDGLRWVYLDIGRFGGLAE 356 Query: 318 DAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGA 373 I Y + + D + GP C+ D + + ++ L G+ + + GA Sbjct: 357 TENESIRYAIRTSRDGSPTGRVALAGPTCDGADIMYEKTHYELPLDLTAGEQVDLLGAGA 416 Query: 374 YGAVQ-SGTYNSR 385 Y + + +N Sbjct: 417 YVSTYCATGFNGF 429 >gi|294676050|ref|YP_003576665.1| lysine/ornithine decarboxylase [Rhodobacter capsulatus SB 1003] gi|294474870|gb|ADE84258.1| lysine/ornithine decarboxylase [Rhodobacter capsulatus SB 1003] Length = 381 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 70/362 (19%), Positives = 131/362 (36%), Gaps = 20/362 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P +S TA++ F F G+ V YA+K+N ++ VI+ L G G D+ S E+ Sbjct: 23 PVLVFSPTALQATARRFLKGFPGV---VTYAVKSNPDEMVIQNLVAAGVKGFDVASPFEI 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 P + + + +EI A+++G+ ++V+S SEL L + + + + Sbjct: 80 DLIRRLA-PGAALHYHNPVRGREEIAHAVRAGVKTWSVDSRSELDKLIEMVPAEKCEISV 138 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 F++ A KFG L A+ I + H G+Q Sbjct: 139 RFKLPVQGAA--------YNFGAKFGATADLAAELLRRAADAGF--IPSLTFHPGTQCTD 188 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ + ++ H + + + + FG+ Sbjct: 189 PAAWEAYILVASEICATAGVRAHRLNVGGGFPNHRKMGPAPVLEDIFALIDRATTEAFGS 248 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + ++ EPGR LV D +TKV +++ D + D L I Sbjct: 249 DRPILVCEPGRGLVGDAFTHITKVKALR--DDTHVFLNDGVYGGLAELPLIGNIERIEVW 306 Query: 327 VNPAGDR--LHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYN 383 +R + + GP C++ D + + + GD + GAY + + +N Sbjct: 307 SPEGFERGGDMVERIVFGPTCDSVDRLPGDVALPAELSEGDYVVFHGMGAYCSATNTRFN 366 Query: 384 SR 385 Sbjct: 367 GF 368 >gi|88857445|ref|ZP_01132088.1| Ornithine decarboxylase [Pseudoalteromonas tunicata D2] gi|88820642|gb|EAR30454.1| Ornithine decarboxylase [Pseudoalteromonas tunicata D2] Length = 386 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 85/389 (21%), Positives = 145/389 (37%), Gaps = 29/389 (7%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L + TPF + Y A + + Y++K+NS +AV++ L LGS + Sbjct: 11 LNKPISTPFLVVDLDVLAHQYRRLVTAMP--NVVCHYSVKSNSARAVLEKLFALGSCFEA 68 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S E+ AA A +I F K I +I+ A Q G+ + + EL L Q Sbjct: 69 ASINEIHACFAAGAKANQIHFGNTIKKISDIETAYQLGVQSYAFDCYEELVKLAQ----Y 124 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + R+ D + S L G++ G+ H+ Sbjct: 125 APGCRVVCRLKNDGKGAHWGLCHKFGCSLTEAVDFLSR-------SVLLGLEPYGLSFHV 177 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL----GIAYHSDHRPPSSSDY 256 GSQ +++H+A R + +L I I++GGG + + S + Sbjct: 178 GSQQQSPDAWHRALVDARWVADELVKQDIKIGLINLGGGYPASGYLNDSDNEVDYSMEFF 237 Query: 257 ASLI------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 I + K I EPGR+L+A+ G++ T VI + + + ++ Sbjct: 238 GKCISESLTAIFGSWSGDLKFICEPGRYLLAEAGVVKTTVILACERMLSDQIHRWLYLDV 297 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADI-VGPICETGDFIALNRKIALP----RPGDL 365 LY+A +++ A R + I GP C++ D ++ + GD Sbjct: 298 GKFNGLYEASDIKYPVLHHADQRSDKTSTILTGPTCDSSDMLSYKNHLHHLPFTIAVGDP 357 Query: 366 LYIEKTGAYGAVQSG-TYNSRLLIPEIMV 393 L GAY S +N + E + Sbjct: 358 LMFCCAGAYSNSYSCKGFNGFEPLAEYYI 386 >gi|225861186|ref|YP_002742695.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae Taiwan19F-14] gi|298230761|ref|ZP_06964442.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254582|ref|ZP_06978168.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503067|ref|YP_003725007.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae TCH8431/19A] gi|225726871|gb|ACO22722.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae Taiwan19F-14] gi|298238662|gb|ADI69793.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae TCH8431/19A] gi|327389203|gb|EGE87548.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA04375] Length = 375 Score = 123 bits (308), Expect = 7e-26, Method: Composition-based stats. Identities = 74/390 (18%), Positives = 128/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + A Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDADLEELLGITDHIVFNS----ERQLRKHGARCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++ +++ A P + + + Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIVENG--MEILVLDASATCHMPDVLEMPY 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + C TGD I + GD LY + Y V++ T Sbjct: 282 RPPLRNGFESQEKAHTYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|256112854|ref|ZP_05453775.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 3 str. Ether] gi|265994300|ref|ZP_06106857.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 3 str. Ether] gi|262765413|gb|EEZ11202.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 3 str. Ether] Length = 365 Score = 123 bits (308), Expect = 7e-26, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 115/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T +++N + + ALK + +V ++ G S E Sbjct: 3 QTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSLNE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 63 VRLGHE-KFGGETHAYSVAYADYEIDEVISHADKIIFNSIGQLERF------ADKASGIK 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP +++++ P L + + + + Sbjct: 116 RGLRLNPGVSSSSFD----------LADPARPFSRLGEWDVAKVENVMDRITGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L D+ ++ S H ++ + +GGG+ H + + + + Sbjct: 166 ENSDFSLFDRMLSDIEEKFGSLLHRVEWVSLGGGI----HFTGEDYPVDAFCARLKSFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KFGVQVYLEPGEASITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD GD L E Y V+ +N Sbjct: 276 KAKMAPNNGGHSYMVCGKSCLAGDIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V ++R + + Sbjct: 336 KMPA-IAVRELDGTVKLVRE-FDYADF 360 >gi|329955138|ref|ZP_08296095.1| carboxynorspermidine decarboxylase [Bacteroides clarus YIT 12056] gi|328526137|gb|EGF53156.1| carboxynorspermidine decarboxylase [Bacteroides clarus YIT 12056] Length = 393 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 118/386 (30%), Gaps = 20/386 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 +P Y + KN + D + A K+ + S Sbjct: 21 FPSPCYIMEEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVY 80 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R A + T + ++ S + K + G+ Sbjct: 81 EARLA--LEEFGSKAHTYSPAYTEADFSEIMRC-SSHITFNSLVQFKRFYPMIQAGGQGI 137 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 RVNP+ + + + +FG+ A LP V G+D Sbjct: 138 SCGIRVNPEYSEVETELYNPCAPGTRFGV----------MAGQLPDVLPQGIDGF-HCHC 186 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 S ++ + L L + I+ +++GGG + L +Y Sbjct: 187 HCESSSYELERTLEHLEAKFSRWFPQIKWLNLGGGHLMTRKDYDVEHLIRLLRGLKERYP 246 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 IILEPG G+L ++V+ I ++ IL+V+ M L Y Sbjct: 247 HL---NIILEPGSAFTWQTGVLTSEVVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAV 303 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 GD + G C +GD++ L G+ + E Y V++ +N Sbjct: 304 RGAE-TGDGGAYVYRLGGNSCLSGDYMGLWSFDHELHIGERIVFEDMIHYTTVKTNMFNG 362 Query: 385 RLLIPEIMV-NGSQFHIIRPRMTFQE 409 M + I ++++ Sbjct: 363 IHHPAIAMWTKEGKADIF-KLFSYED 387 >gi|270292720|ref|ZP_06198931.1| carboxynorspermidine decarboxylase [Streptococcus sp. M143] gi|270278699|gb|EFA24545.1| carboxynorspermidine decarboxylase [Streptococcus sp. M143] Length = 375 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 75/390 (19%), Positives = 126/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + A Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDADLEELLEITDHIVFNS----ERQLRKHGARCRAA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ + +I S L V Sbjct: 119 GISVGLRLNPRCSTQGDHALYDPCAPGSRFGVTLDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E+ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLETTLKAVE------EQFGPYLHEVKWLNMGGGHHITREDYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ +EPG + + G L TKV+ I + +++ A P + + + Sbjct: 224 RIRETYNLEVYIEPGEAIALNAGYLATKVLDIV--ENSMEILVLDASATCHMPDVLEMPY 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + C TGD I + GD LY E Y V++ T Sbjct: 282 RPPLRNGFEAQEKIHTYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFEDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDERGDCSLV-KAFGYQDF 370 >gi|222153445|ref|YP_002562622.1| carboxynorspermidine decarboxylase [Streptococcus uberis 0140J] gi|222114258|emb|CAR42867.1| putative carboxynorspermidine decarboxylase [Streptococcus uberis 0140J] Length = 375 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 119/389 (30%), Gaps = 23/389 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y + KN + D + A KA S A + +G Sbjct: 4 EHVPTPSYVIDEGQLIKNLEILKSVQDEAGCKILLAQKAYSLFATYPLIGQYLAGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + + E VF+ K D +L + FN E ++ Sbjct: 64 LYEAKLGHE-EMGGEVHVFAPAFKDHDMKELLEIADHIVFNSE------RQLRKHAEACH 116 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 A ++ + + +T S + + ++ + Sbjct: 117 HAGVSIGLRLNPEISTQNDHDQ--------YDPCAYGSRFGVTESHFHPEVLELIDGFHF 168 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ L+ + S H ++ +++GGG I I + Sbjct: 169 HTLCEQNVDDLVTTLKVFEAKFGSYLHQLKWLNLGGGHHITRAD----YDLPTLVQEIKR 224 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + I LEPG + + G L T+V+ I ++ T ++ A + + + Sbjct: 225 LKETYKIDIYLEPGEAIALNAGYLATEVLDIVENGISTLILDASATCHMP--DVIEMPYR 282 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + C TGD I G LY + Y V++ T+ Sbjct: 283 PPLKDAFDAQEKAFTYRLSSNTCLTGDIIGDYSFEKAVEIGQRLYFQDMAIYSFVKNNTF 342 Query: 383 NSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 N L +++ H+I+ T+++ Sbjct: 343 NGIGLPSLYLMDQSGDCHLIKS-FTYEDF 370 >gi|148992947|ref|ZP_01822566.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP9-BS68] gi|168490263|ref|ZP_02714462.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP195] gi|147928399|gb|EDK79415.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP9-BS68] gi|183571393|gb|EDT91921.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP195] gi|332073252|gb|EGI83731.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA17570] Length = 375 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 74/390 (18%), Positives = 128/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDEDMEELLGITDHIVFNS----ERQLRKHGSRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S + + + Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPS-----------DLLDLVDGLH 167 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + L+++ +Q H ++ +++GGG I S I Sbjct: 168 FHTLCEQGADDLQTTLKEVEEQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY + Y V++ T Sbjct: 283 PPLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|327269436|ref|XP_003219500.1| PREDICTED: antizyme inhibitor 1-like isoform 1 [Anolis carolinensis] Length = 449 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 66/382 (17%), Positives = 124/382 (32%), Gaps = 31/382 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + K+++ + N Y +K NS V++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKLIKHHIHWQNVMA--PIKPFYNVKCNSTPGVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + +E I+FS K +I A ++G+ ++E ELK + + + IA Sbjct: 98 VQDLGISSENILFSNPCKQASQIKYAAKTGVNVLTCDNELELKKIARNHPNAKLLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + FG + L A L V+I GV ++ + + + Sbjct: 157 ---------TEDINGGEEMNMMFGTTLKNCRHLMECAKEL-NVQIIGVKFNVSNSCKEPQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +++G G + L + Sbjct: 207 VYKHAISDARCVFDMAEEFGFTMNMLNIGSGFTDYEFDLEKINHVVS-PLLDIYFPEESG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY--- 325 +I E G + V+ L +I+ K ++ ++ Y Sbjct: 266 VNVIAEAGCYYVSSAFTLAVNIIAKKAVQSTEPLLFKTEQTQGDDQVFMYYINDGVYGSF 325 Query: 326 --------------IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 D + + GP C+ D I N + GD L + Sbjct: 326 ASKLSDNLTTIPEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELNVGDWLLFDNM 385 Query: 372 GAYGAVQSGTYNSRLLIPEIMV 393 G+ + +N P + Sbjct: 386 GSGTLGEQSAFNDFQRPPVYYI 407 >gi|104781480|ref|YP_607978.1| carboxynorspermidine decarboxylase NspC [Pseudomonas entomophila L48] gi|95110467|emb|CAK15175.1| carboxynorspermidine decarboxylase NspC [Pseudomonas entomophila L48] Length = 365 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 52/388 (13%), Positives = 103/388 (26%), Gaps = 31/388 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + N + ALK + +V + G S EL Sbjct: 4 TPYYLIDKQKLLGNMEKIAYVRQQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ FN + E Sbjct: 64 KLGRQ-KFAGETHAYSVAWADDEVEEMLENCDKIIFNSIGQLERFAEQSEGKVR------ 116 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + P L + I + + + Sbjct: 117 ----------GLRVNPQVSSSDYLLADPARPFSRLGEWDPEKIEKVIEKISGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F K+L + ++ H ++ + +GGG+ H + + + + + Sbjct: 167 NGDFSLFDKMLSHIEERFGHLLHKVEWVSLGGGI----HFTGEDYAVDAFCARLKAFAEK 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + + L V+ + V+ + +Y Sbjct: 223 YAVQVYLEPGEAAITNSASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIY------RLN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A + + G C GD + + GD L T Y V+ +N Sbjct: 277 AKMAPNDGAHTYMVCGKSCLAGDIFGEYQFDKPLQIGDRLSFVDTAGYTMVKKNWFNGLK 336 Query: 387 LIPEIMVN--GSQFHIIRPRMTFQELIE 412 + I V ++R F + + Sbjct: 337 MPS-IAVKQLDGSVEVVRE-FGFDDYVS 362 >gi|146283566|ref|YP_001173719.1| carboxynorspermidine decarboxylase [Pseudomonas stutzeri A1501] gi|145571771|gb|ABP80877.1| carboxynorspermidine decarboxylase [Pseudomonas stutzeri A1501] Length = 365 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 50/387 (12%), Positives = 100/387 (25%), Gaps = 29/387 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + N + + ALK + +V + G S EL Sbjct: 4 TPYYLIDKQKLLGNLEKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ FN + E Sbjct: 64 KLGRQ-KFAGETHAYSVAWADDEIEEMVANCDKIIFNSIGQLERFAEATEGTIR------ 116 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + P L + I + + + Sbjct: 117 ----------GLRVNPQVSSSDYLLADPARPFSRLGEHDPAKIEAMIGKISGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 SF K+L + ++ +Q + +GGG+ H + + + + Sbjct: 167 NSSFELFDKMLSTIEERFGHLLEQVQWVSLGGGI----HFTGEGYPLDAFCARLKAFSEK 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + L V+ + V+ + +Y Sbjct: 223 FGVQVYLEPGEAAITMSASLEVTVLDTLYNGKNLAVVDSSIEAHMLDLLIY------RLN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A + + G C GD + GD L Y V+ +N Sbjct: 277 AKMAPNDGEHSYMVCGKSCLAGDIFGEYQFDRPLAIGDRLSFIDAAGYTMVKKNWFNGLK 336 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQELIE 412 + ++ ++R F + + Sbjct: 337 MPSIVVKQLDGSVEVVRE-FDFNDYLS 362 >gi|301310449|ref|ZP_07216388.1| carboxynorspermidine decarboxylase [Bacteroides sp. 20_3] gi|300832023|gb|EFK62654.1| carboxynorspermidine decarboxylase [Bacteroides sp. 20_3] Length = 379 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 52/388 (13%), Positives = 113/388 (29%), Gaps = 18/388 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + + +P Y + N + + + A KA + + Sbjct: 4 INKIPSPCYVMEEKLLRNNLSLIKSVKERAGVNIILAFKAFALWKAFPIVREYIPFSTAS 63 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S+ E + A + + + S S+ + G Sbjct: 64 SKFEAQLAFEEMGSPAH---TYSPAYTEADFPLILRYSSHVTFNSLSQFHRFYPMVRADG 120 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP+ + + + G+ L G + + Sbjct: 121 NRVSCGLRINPEYSDVETDLYNPCAPGSRMGVT-----------GDLLGDTLPEGIEGLH 169 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + + L ++ ++ +++ +++GGG + A L Sbjct: 170 FHTLCESTSYDLERTLAEVERRFGRFLPHVKWLNMGGGHLMTRKDYD---VEHLIALLKG 226 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++I+EPG G L+T V+ I ++ I+D + M L Y Sbjct: 227 FKERYPNLELIMEPGSAFAWQTGFLLTTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYK 286 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A + I G C +GD++ GD L E Y V++ Sbjct: 287 PAIRFATDAVEGKP-TYRIGGNSCLSGDYMGDWSFDKPLAIGDKLIFEDMIHYTIVKTNM 345 Query: 382 YNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 +N + N ++ +++ Sbjct: 346 FNGIPHPSLALWNKDNQLVMYRTFGYED 373 >gi|306844972|ref|ZP_07477553.1| carboxynorspermidine decarboxylase [Brucella sp. BO1] gi|306274604|gb|EFM56393.1| carboxynorspermidine decarboxylase [Brucella sp. BO1] Length = 365 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 115/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T +++N + + ALK + +V ++ G S E Sbjct: 3 QTPYYLIDKTKLKRNMEKIACVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSLNE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 63 VRLGHE-KFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERF------ADKASGIK 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP +++++ P L + + + + Sbjct: 116 RGLRLNPGVSSSSFD----------LADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L D+ ++ S H ++ + +GGG+ H + + + + Sbjct: 166 ENSDFSLFDRMLSDIEEKFGSLLHRVEWVSLGGGI----HFTGEDYPVDAFCARLKSFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KFGVQVYLEPGEASITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD GD L E Y V+ +N Sbjct: 276 KAKMAPNNGGHSYMVCGKSCLAGDIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V ++R + + Sbjct: 336 KMPA-IAVRELDGTVKLVRE-FDYADF 360 >gi|315505089|ref|YP_004083976.1| orn/dap/arg decarboxylase 2 [Micromonospora sp. L5] gi|315411708|gb|ADU09825.1| Orn/DAP/Arg decarboxylase 2 [Micromonospora sp. L5] Length = 390 Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 85/351 (24%), Positives = 145/351 (41%), Gaps = 13/351 (3%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + A+ + A + + YA+KAN V++TLA + G + S GELR Sbjct: 4 PVYVHDLDALAGHARAIRAALP-PEVELLYAVKANPEPDVLRTLAPVVDGFETASRGELR 62 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 R ++G GKT ++ AL +G+ +VES +EL+ L AVS G +A + Sbjct: 63 RLAQVLPERAAAAYAGPGKTDADLAAALAAGVARIHVESPAELRRLGALAVSAGVRARVL 122 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVN + A + G+ FG+ + + GV++ GV +H+ S +D Sbjct: 123 LRVNLPLEAPGASLVMGGRPS-PFGMDPAEAVACARRPP--AGVEVRGVHVHLASGLDAP 179 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + A ++R ++ + +DVGGG+ + Y + Y + Sbjct: 180 LAAMVAEAVVRWSVSEVG-----AREVDVGGGMAVDYVDPAARFDWASYGRALAGVCDAY 234 Query: 268 QCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + +EPGR + A G +T+VI +K+S + F ++ + P Sbjct: 235 PGVRLRVEPGRSVTAYCGAYLTEVIDVKRSYGEWFAVVAGGTHHLRTPAAKGHAQPFTVH 294 Query: 327 VNPAGDRLHI---HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 +GD +VG +C D ++ D+L GAY Sbjct: 295 QRYSGDGPCTDGGPVTVVGQLCTPKDVLSRTTHAGPVGVRDVLVFAMAGAY 345 >gi|168491008|ref|ZP_02715151.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC0288-04] gi|183574729|gb|EDT95257.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC0288-04] Length = 375 Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 74/390 (18%), Positives = 127/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + A Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDADLEELLGITDHIVFNS----ERQLRKHGARCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++ +++ A P + + + Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIVENG--MEILVLDASATCHMPDVLEMPY 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + C TGD I + GD LY + Y V++ T Sbjct: 282 RPPLRNGFESQEKAHTYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|114798216|ref|YP_759314.1| putative carboxynorspermidine decarboxylase [Hyphomonas neptunium ATCC 15444] gi|114738390|gb|ABI76515.1| putative carboxynorspermidine decarboxylase [Hyphomonas neptunium ATCC 15444] Length = 376 Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 63/390 (16%), Positives = 116/390 (29%), Gaps = 29/390 (7%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 +QTP + + KN T V A KA + A + G Sbjct: 4 EIQTPCFVLDIARLRKNLETAQRVRAEAGCKVLLATKAFAMPAAFPLMRDYLDGTTAS-- 61 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 GE + A + + T DE+ + S +L A G Sbjct: 62 GEQEAIMGAEEFGKEVHVYSPAYTEDEVRRLTKV-AQHIYFNSAEQLGRFGDIARDAGCH 120 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + + +FG ++ + S + + + + Sbjct: 121 VGLRVNPGYSNATLGGDLYNPTAPTSRFGEVPSKLVQVN--WSGVDIFHVHALCESMAEG 178 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 L+ +++ ++ ++ GGG + I+++ Sbjct: 179 S---------VGLIEYVSEHFAPYLEQVKAVNFGGGHFLNKPG----YDVDALVGAINKF 225 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +++LEPG LV + G L + V+++ + ILD + + M L Y Sbjct: 226 KARFGIEVVLEPGAGLVVNTGELHSTVLAL-HWNEMDLAILDASASTHMPDVLEVPYRPD 284 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 G+ H G C TGD I PGD + Y V++ T+N Sbjct: 285 VIGAGQPGELAH-TYRFGGKTCMTGDVIGDYSFDKPLEPGDAIIFTDQMHYSFVKTNTFN 343 Query: 384 SRLLIPEIM-VNGSQFHII--------RPR 404 L ++ + + R R Sbjct: 344 GTPLANLVIRWEDGRVEQVSDFGYGEFRRR 373 >gi|114800350|ref|YP_761668.1| decarboxylase, group IV [Hyphomonas neptunium ATCC 15444] gi|114740524|gb|ABI78649.1| decarboxylase, group IV [Hyphomonas neptunium ATCC 15444] Length = 398 Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 70/375 (18%), Positives = 114/375 (30%), Gaps = 24/375 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P YC+ + F F YA+K N V+ L G D SE E+ Sbjct: 19 PTYCFRPERVTAAASWFVEKFP---AQPFYAVKVNPAPHVLDALWEGGIRSFDAASEKEI 75 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL-NQRAVSLGKKAP 145 A V Q G+ F +S +EL + + + Sbjct: 76 ELIRGRFPDARIAFLHPVKPRRAIERAYKQHGVRIFVTDSMAELHKILDATDFAKDLTIL 135 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + V+ + +A KFG + L + A + + Sbjct: 136 VRIAVSNEGSA--------LPLSGKFGASAAEAAELLSVARRYADELGVSFHVGSQAMKP 187 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + A + G + +DVGGG Y + P A ++ + Sbjct: 188 SAWAQAMADASRVIIDA-----GVTVDIVDVGGGFPAIYADKNPPAMDDYVAMVMRSFEN 242 Query: 266 NL---QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + EPGR LVA+ L+ V K +A A+ D + Sbjct: 243 MFVLENADLWCEPGRALVAEAESLLVGVDLAKDNAIYINEGSYGALYDAVHENWVFPMRA 302 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGT 381 I+ G + + GP C++ D + + GD + I GAYG + Sbjct: 303 ISGDGRKLG--RMVEYTVYGPTCDSADMLPGKVWLPAGLTEGDYIEIGNIGAYGRSMATR 360 Query: 382 YNSRLLIPEIMVNGS 396 +N +V S Sbjct: 361 FNGFGESDVAIVQDS 375 >gi|171912952|ref|ZP_02928422.1| carboxynorspermidine decarboxylase [Verrucomicrobium spinosum DSM 4136] Length = 386 Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 119/390 (30%), Gaps = 22/390 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y ++KN + + ALK S + + G Sbjct: 12 ARVATPAYVVDLALLKKNLTLLHEVQEASGAKILLALKGFSMFSTFGLVREYLHGCCASG 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E E V+ K + + + FN ++ + + G Sbjct: 72 LNE-ALLAHHEFGKEVHVYCPAFKEAEMEQILPIACHISFNSLAQWQRFKPV-LEGAEGN 129 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + RVNP+++ + G + A + L G+ + Sbjct: 130 RPSPGLRVNPELSTVEVALYDPCSPGCRLGT--RDVELEGADLTGLEGLHFHALCEQ--- 184 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + +++ + ++ ++ +++GGG I ++ Sbjct: 185 ------NSDVLERVIESVERRFPKFLKQVKWVNMGGGHHITKPG----YDVERLVRIVKA 234 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + + G LVT V+ I + +KT ++ A + + + Sbjct: 235 FRERHDVEVYLEPGEAIALNTGYLVTSVLDIVGAEEKTAILDTSATCHMP--DVLEMPYR 292 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I + G C GD I G L G Y V++ T+ Sbjct: 293 PQIIGAGLPGEHGYTYKLGGTSCLAGDVIGAYSFPEPLHLGQKLIFTDMGHYTMVKTTTF 352 Query: 383 NSRLLIPEIMVN--GSQFHIIRPRMTFQEL 410 N + + ++R R +++ Sbjct: 353 NGVPHPDIDTYDPATGELRVVR-RFGYEDF 381 >gi|195997033|ref|XP_002108385.1| hypothetical protein TRIADDRAFT_19621 [Trichoplax adhaerens] gi|190589161|gb|EDV29183.1| hypothetical protein TRIADDRAFT_19621 [Trichoplax adhaerens] Length = 351 Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 71/344 (20%), Positives = 119/344 (34%), Gaps = 17/344 (4%) Query: 51 MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDE 110 +ALK N ++ + TL G G + VS+ E+ L E+I+F+ K I Sbjct: 8 PRVHPYFALKCNVDRGFLATLLAFGFGFEGVSKAEIDTVLKMGASPEKIIFANPYKPISH 67 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 I A + ++ +EL + + + F S + K Sbjct: 68 IKYAAHQNVNLMTFDNVTELYKIKEFYPKARLLLRLKFD----------DPRSKYELGKK 117 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 +G+ I ++ + A L + + G+ H+G +F KA +L + +S G N Sbjct: 118 YGVEIDEVTHILQIAREL-QLNVVGISYHVGGGYTDACNFLKAIELAKTAFNYAKSIGIN 176 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 +D+GGG +S + S+ ++L + II EPGR+ LV V Sbjct: 177 FNVLDIGGGFPGQANSLFKKICSNISSALDKHFPVEDNISIIAEPGRYFAETAFTLVLCV 236 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDA------YHEINYIVNPAGDRLHIHADIVGPI 344 ++ + I Y V + GP Sbjct: 237 AGKREIYEIDQKIPKKFEYYVNDGRYGSFSEFLMSYGCQYPQVIGKKSETLYSTRLWGPT 296 Query: 345 CETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 D I + GDL+Y E+ GAY V +N Sbjct: 297 VSGSDCIFEECYLPELEVGDLIYFEEMGAYTTVLGTNFNGLTRP 340 >gi|150399162|ref|YP_001322929.1| Orn/DAP/Arg decarboxylase 2 [Methanococcus vannielii SB] gi|150011865|gb|ABR54317.1| Orn/DAP/Arg decarboxylase 2 [Methanococcus vannielii SB] Length = 409 Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 85/412 (20%), Positives = 142/412 (34%), Gaps = 32/412 (7%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLG 75 L KL FY + KNY F F +T++ Y+ K N + + G Sbjct: 8 LNKLNEDFGDSFYLLDSNKFVKNYDEFLGEFQKIYPNTVIAYSYKTNYLPHLCSIVNKKG 67 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS+ E A+ V I+ +G KT + ++ L G NV+S EL + + Sbjct: 68 GFAEVVSKMEYDLAIKIGVIPSNIIVNGPLKTKEHLEYFLLKG-SIVNVDSYRELDLIRE 126 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A S ++ G +FG + + + + Sbjct: 127 IANS---------NPGKILSVGIRCNFEMGSTVSRFGFDVRDAEFIEKFKELKKIDNLYI 177 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-------AYHSDH 248 I + ++ + NI GG A + Sbjct: 178 --KGIHCHFPDRNLDSYSKRVDNLINILDLLFKENIPEFVDIGGGYFGKVNDFLAKQFNC 235 Query: 249 RPPSSSDYA--------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 PS SDYA N + K+ILEPG LVAD + K++ IK K Sbjct: 236 NVPSYSDYASIIASRFKEYFKNIPENRKPKLILEPGTALVADTMKFIAKIVEIKNIRGKK 295 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 + + + L IN + + DI G C D++ N + Sbjct: 296 IAMTTGSKFNMGLFGL-SINLPINVYSEFKNGKFINNVDISGYTCIEADYLFKNY-CGIL 353 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 GD + + G+Y V + +P I NG +F I++ + TF+++ + Sbjct: 354 NIGDYIAFDNVGSYSFVFKPPFIC-PNVPIIDYNGDKFKIVKHKETFEDIFK 404 >gi|169833511|ref|YP_001694373.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae Hungary19A-6] gi|225858718|ref|YP_002740228.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae 70585] gi|168996013|gb|ACA36625.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae Hungary19A-6] gi|225722120|gb|ACO17974.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae 70585] Length = 375 Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 79/390 (20%), Positives = 130/390 (33%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + A Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDADLEELLGITDHIVFNS----ERQLRKHGARCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY + Y V++ T Sbjct: 283 PPLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|325277688|ref|ZP_08143260.1| carboxynorspermidine decarboxylase [Pseudomonas sp. TJI-51] gi|324097183|gb|EGB95457.1| carboxynorspermidine decarboxylase [Pseudomonas sp. TJI-51] Length = 365 Score = 123 bits (307), Expect = 9e-26, Method: Composition-based stats. Identities = 53/388 (13%), Positives = 112/388 (28%), Gaps = 31/388 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y T + N + + ALK + +V + G S EL Sbjct: 4 TPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLFEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ S +L+ ++ + + Sbjct: 64 KLGRQ-KFAGETHAYSVAWADDEVEEMLE--NCDKIIFNSIGQLQRFADQSEGKVRGLRV 120 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 +V+ + P L + I + + + Sbjct: 121 NPQVSS--------------SDYLLADPARPFSRLGEWDPAKIEQVIGQISGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F K+L + ++ H ++ + +GGG+ H + + + + + Sbjct: 167 NGDFGLFDKMLTHIEERFGHLLHQVEWVSLGGGI----HFTGEDYAVDAFCARLKAFAQT 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + + L V+ + V+ + +Y Sbjct: 223 YGVQVYLEPGEAAITNSASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIY------RLN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A + + G C GD + GD L T Y V+ +N Sbjct: 277 AKMAPNDGEHTYMVCGKSCLAGDIFGEYQFDRPLAIGDRLSFVDTAGYTMVKKNWFNGLK 336 Query: 387 LIPEIMVN--GSQFHIIRPRMTFQELIE 412 + I V ++R F++ + Sbjct: 337 MPS-IAVKQLDGSVEVVRE-FGFEDYVS 362 >gi|226943071|ref|YP_002798144.1| diaminopimelate decarboxylase [Azotobacter vinelandii DJ] gi|226717998|gb|ACO77169.1| diaminopimelate decarboxylase [Azotobacter vinelandii DJ] Length = 396 Score = 123 bits (307), Expect = 9e-26, Method: Composition-based stats. Identities = 81/328 (24%), Positives = 140/328 (42%), Gaps = 6/328 (1%) Query: 52 DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 + YA KAN ++++LA G + S GELR + ++F G GK E+ Sbjct: 48 GCELFYAAKANPEAPILRSLAPWVDGFEAASGGELRWLHECHPD-KPLIFGGPGKLDSEL 106 Query: 112 DLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF 171 A+ GI F+VES EL+ L A + G+ AP+ R+N ++ ++ G K F Sbjct: 107 AAAMDCGISAFHVESIGELRRLAVVAKAHGRPAPLLLRLNLKLDEAPDSRLVMGGKPTPF 166 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHN 230 G+ + A + P +++ G+ H+ S + + + +Q +G + Sbjct: 167 GLDEEALDEALALLAGEPWLELQGLHFHLLSHQLDSAAHLQLMRSYFRCFRQLNARHGLD 226 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC---KIILEPGRFLVADVGILV 287 ++ ++VGGG+GI Y R + + + +I E GRFL A G + Sbjct: 227 LKLLNVGGGMGIDYRDHARSFDWPGFCAGLAALIAEEGMAGTRIRFEIGRFLAAACGYYL 286 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY-IVNPAGDRLHIHADIVGPICE 346 +V+ IK++ + F + + F P H + + +VG +C Sbjct: 287 MEVLDIKRNHGQYFAVARGGTHHFRTPAAQGHDHPFVVLRGERPAELENQPVTLVGQLCT 346 Query: 347 TGDFIALNRKIALPRPGDLLYIEKTGAY 374 D +A + +A GDLL GAY Sbjct: 347 PKDVLARQQPVAALAVGDLLVFPLAGAY 374 >gi|327269438|ref|XP_003219501.1| PREDICTED: antizyme inhibitor 1-like isoform 2 [Anolis carolinensis] Length = 451 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 67/384 (17%), Positives = 125/384 (32%), Gaps = 33/384 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + K+++ + N Y +K NS V++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKLIKHHIHWQNVMA--PIKPFYNVKCNSTPGVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + +E I+FS K +I A ++G+ ++E ELK + + + IA Sbjct: 98 VQDLGISSENILFSNPCKQASQIKYAAKTGVNVLTCDNELELKKIARNHPNAKLLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + FG + L A L V+I GV ++ + + + Sbjct: 157 ---------TEDINGGEEMNMMFGTTLKNCRHLMECAKEL-NVQIIGVKFNVSNSCKEPQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +++G G + L + Sbjct: 207 VYKHAISDARCVFDMAEEFGFTMNMLNIGSGFTDYEFDLEKINHVVS-PLLDIYFPEESG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI----- 323 +I E G + V+ L +I+ K ++ N+ Y+ Sbjct: 266 VNVIAEAGCYYVSSAFTLAVNIIAKKAVQSTEPLLFKSKQNNLPGDDQVFMYYINDGVYG 325 Query: 324 --------------NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 D + + GP C+ D I N + GD L + Sbjct: 326 SFASKLSDNLTTIPEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELNVGDWLLFD 385 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMV 393 G+ + +N P + Sbjct: 386 NMGSGTLGEQSAFNDFQRPPVYYI 409 >gi|94265115|ref|ZP_01288880.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1] gi|93454402|gb|EAT04700.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1] Length = 380 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 52/389 (13%), Positives = 114/389 (29%), Gaps = 21/389 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 V +P Y + + N + A K + + ++ + G Sbjct: 6 VQRVPSPCYVCDSGRLAANLEKLDLVQRRTGARIILAFKGFAMWRLFPQISRVLPGASAS 65 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E R A E V+ + + ++ + FN ++ + A S Sbjct: 66 SLDEARLARE-EFGGEVHVYCPAYRDDEFAEMLGYADHLVFNSFNQWQRFKPLVAADSRP 124 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I + + + G+ Q ++ + Sbjct: 125 HSCGIRVNPQY--SEVAVDLYNPCGPHSRLGVTRAQFRP-----------ELLAGLDGLH 171 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 ++ L ++ ++ +++GGG I LI Sbjct: 172 FHALCEQNADALAGTLAAFHEKFGEFMDGMKWLNMGGGHHITRPD----YDIDQLCRLID 227 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ LEPG + D+G+LV V+ I + ++ ++ A + + + Sbjct: 228 EVRTRYHVRVYLEPGEAIALDIGVLVATVLDIVDNEGRSAILDTSAAAHMP--DVLEMPY 285 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + + G C GD I + G L Y V++ T Sbjct: 286 RPEIFGAGEPGQYPYTYRLGGLSCLAGDVIGEYSFPEPLQIGQRLVFGDMAHYTMVKNNT 345 Query: 382 YNSRLLIPEIMVNGSQFHI-IRPRMTFQE 409 +N L + + H+ + R +++ Sbjct: 346 FNGVRLPSIAIYEPATDHLEVVRRFGYED 374 >gi|117924389|ref|YP_865006.1| Orn/DAP/Arg decarboxylase 2 [Magnetococcus sp. MC-1] gi|117608145|gb|ABK43600.1| carboxynorspermidine decarboxylase [Magnetococcus sp. MC-1] Length = 390 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 52/377 (13%), Positives = 102/377 (27%), Gaps = 24/377 (6%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 + L V+TP + + KN ++ + ALKA + K L Sbjct: 31 WIRAIDL----EQVKTPCHILDGATLTKNGEILADVAARSGATLLLALKAFAQPECFKFL 86 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G+ S E R + + + + + S ++ + Sbjct: 87 KGHLHGVAASSLHEARLGQEHFG---GELHTYAPAYLPDEMDYIAQHATHIVFNSFNQWR 143 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + + + G+P+ + Sbjct: 144 RYKGQLQGSQASVGMRINPERSTRGGDFDSCDPCQPGSRMGVPLALFEADAMEGI----- 198 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + ++ + L + + H ++ I+ GGG I H Sbjct: 199 ------EGLHFHTLCMQGPAALARTLEAVEARFGHVFHKLKWINFGGGHLI----THPNY 248 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 LI + + LEPG +V + ++V +V I +A ++ A Sbjct: 249 DRERLIQLIKDFRAKHGLAVTLEPGAGVVFNTDVVVAQVQDIIHTATPNVILDLSAAAHV 308 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + D + G C +GD+ L + G L Sbjct: 309 T--DVLDLGWRPTIWGAGREGEYAHTYRLGGHSCLSGDYFGLYSFPEPLQIGQKLVFLDM 366 Query: 372 GAYGAVQSGTYNSRLLI 388 Y V+ T+N L Sbjct: 367 AHYTLVKMTTFNGLALP 383 >gi|242071387|ref|XP_002450970.1| hypothetical protein SORBIDRAFT_05g021830 [Sorghum bicolor] gi|241936813|gb|EES09958.1| hypothetical protein SORBIDRAFT_05g021830 [Sorghum bicolor] Length = 426 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 118/363 (32%), Gaps = 8/363 (2%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 T F+ + + + + A D YA+K N + A++ LA LG+G D S E+ Sbjct: 55 TAFHVFHINTVVDLFSAWRRALP--DVRPFYAVKCNPDPALLGALAALGAGFDCASRAEM 112 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 LA V ++++ K ++ A +G+ ++ESE+ + + + + Sbjct: 113 EAVLALGVGVGDLIYANPCKAEPHLEYAAAAGVALATYDTESEVAKVARCHPNCELLLRL 172 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A + K + + A + + Sbjct: 173 KGPDGGTTVAGGGRGGDLMNKYGAHADEVSPLLRAAQRAGVRVAG--VSFHVGSPVSRSR 230 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD--YASLIHQYF 264 + + A + R + G + GG A + + + A Sbjct: 231 VGVYRGAIESARAAFDAAAALGMPPMRVLDIGGGFSAGAAFDEAAAVINGALADAFGDLL 290 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + ++I EPGR+ L +VI + + +D + + L D Sbjct: 291 RCRRVEVIAEPGRYFAETAFTLAARVIGRRARGEAREYWIDDGLYGSLNNVLMDHKVPRP 350 Query: 325 YIVNPAGDRLHIH--ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + G+ + + GP C++ D + + GD L + GAY + Sbjct: 351 RPLAAGGEEKTTTHSSTVFGPTCDSQDQVVTGYPLPEMSVGDWLVFDDMGAYSTGAGSKF 410 Query: 383 NSR 385 N Sbjct: 411 NGF 413 >gi|291542522|emb|CBL15632.1| Diaminopimelate decarboxylase [Ruminococcus bromii L2-63] Length = 392 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 72/396 (18%), Positives = 139/396 (35%), Gaps = 25/396 (6%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++ +T FY + ++ D +CYA+KAN+ + L + Sbjct: 2 NEILKQNKTAFYVFDVKTLKDRVAYLRKMLPE-DVAICYAIKANT--FITAELENDVDRF 58 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC--FNVESESELKTLNQR 136 +I S GE +P + +V SGV KT + + + +G F VES ++ + Sbjct: 59 EICSPGEAEICDLLDIPDKMMVISGVYKTPEVMKNMVANGKCDRIFTVESLTQFNLFREL 118 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + KK + R+ +FGI +I + + + + I G+ Sbjct: 119 SEKYKKKISLLLRLTNGS---------------QFGINSDEIEEIISKRNEFEYLDILGI 163 Query: 197 DMHIGSQIDQIESFHKAFKLLRDL-TQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 G+Q ++ + L +L + + ++ G G Y + Sbjct: 164 QFFSGTQKTSLKKLKREIDKLDNLLILLKEKYDYTAEELEYGTGFPATYFKEDTINEDEL 223 Query: 256 YASLIHQYFGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 I LE GR + A G T ++ K + + ++++D MN + Sbjct: 224 IGGFAQLLNEMTSKPKITLELGRSIAAICGKYYTHIVDKKCNKGENYLLVDGGMNHIVYY 283 Query: 315 -TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + + +I G +C D IA + GD++ E TGA Sbjct: 284 GQHMAMKQPYLSVCGKETEPCTESWNICGSLCSMNDIIAKQISLPDIEIGDVICFENTGA 343 Query: 374 YGAVQS-GTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 Y + + SR + + ++ R +F+ Sbjct: 344 YCMTEGISLFLSRDIPSVYIKKEDGTYLCV-RDSFE 378 >gi|291279674|ref|YP_003496509.1| carboxynorspermidine decarboxylase [Deferribacter desulfuricans SSM1] gi|290754376|dbj|BAI80753.1| carboxynorspermidine decarboxylase [Deferribacter desulfuricans SSM1] Length = 394 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 64/376 (17%), Positives = 122/376 (32%), Gaps = 20/376 (5%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E + + + TP Y S AIE N D + A KA + ++ G+ Sbjct: 14 ENILNKIDTPAYVISEDAIEYNCQILKRVQDEAGVKILLAQKAYTLPVTYPLISKYLYGV 73 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 E + ++ V + ++ + S ++LK + Sbjct: 74 CASGLWEAKLGYKHF---KKEVHTYAPAYRNDEIDEIIEYSDMVIFNSINQLKKYGELVK 130 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + GK+ + RVNP + + +FG+ + G Sbjct: 131 NRGKQ--VGLRVNPGHSEVEVDLYNPCIPGSRFGVNP-------EDIEGQDLSIVDGFHF 181 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 H + + ++L+ ++ + ++ ++ GGG I Sbjct: 182 HALCEQ----NSDVFVRVLKSFEKRFGKYINELKWVNFGGGHHITRDDYDLKLFIDTLKD 237 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 +Y NL + LEPG +V G+ +T+V+ I + ++ A Sbjct: 238 FSKRYGKNL--DVYLEPGEAVVLHAGVFITQVLDIINNGVDIAIVDSSAETHTPDVLAMP 295 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 +I + D I G C GDF + GD L + Y V+ Sbjct: 296 YTPKILGAGDW--DEYEFKYRIGGCSCLAGDFFGYYSFKNPLKVGDKLIMLDMALYSFVK 353 Query: 379 SGTYNSRLLIPEIMVN 394 + T+N L +++N Sbjct: 354 NNTFNGVKLPSIVVIN 369 >gi|155370410|ref|YP_001425944.1| hypothetical protein FR483_N312L [Paramecium bursaria Chlorella virus FR483] gi|155123730|gb|ABT15597.1| hypothetical protein FR483_N312L [Paramecium bursaria Chlorella virus FR483] Length = 372 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 81/360 (22%), Positives = 137/360 (38%), Gaps = 17/360 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY +E +S+ F YA+K N+++ ++K LA G D S+ E+ + Sbjct: 19 FYVSDPKFVEHLTSVWSDIFPL--VQPFYAVKCNNDKVLLKVLADNGVNFDCASKNEITQ 76 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+F+ K+ D I A Q+G+ +S EL + I Sbjct: 77 VLKLGVDPSRIIFAHTVKSPDSIIFAKQAGVNLMTFDSSFELDKIKNYHPEAKMVLRIRC 136 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 K +K+G ++I +L +A L + + G+ H+GS + Sbjct: 137 -----------DDPHALVKLEKYGALSNEIETLLEHAKKL-HITVYGISFHVGSGSRNPD 184 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS--SDYASLIHQYFGN 266 ++ KA K R+ + GH + ID+GGG+ + + I +F + Sbjct: 185 AYWKALKSAREAYDIATAMGHEVGIIDIGGGMYADIEDNGTVSTCVAEYVRDGIKDFFSD 244 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 K I EPGRF +L +V+ + ++ + +Y+ I Sbjct: 245 TDVKFIAEPGRFFAQHYSVLACQVVGKRVRDGYYEYFVNESTYGGFSNVIYEKAVPEPII 304 Query: 327 VNPAGDRLHIH-ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 V G+ H + I G C+ D I I D +Y GAY ++N Sbjct: 305 VKDVGENDEKHMSVIYGCTCDGVDVINKQTHIPELNIDDWIYFPMWGAYTNCLVTSFNGF 364 >gi|254718525|ref|ZP_05180336.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella sp. 83/13] gi|265983495|ref|ZP_06096230.1| carboxynorspermidine decarboxylase [Brucella sp. 83/13] gi|306838333|ref|ZP_07471179.1| carboxynorspermidine decarboxylase [Brucella sp. NF 2653] gi|264662087|gb|EEZ32348.1| carboxynorspermidine decarboxylase [Brucella sp. 83/13] gi|306406624|gb|EFM62857.1| carboxynorspermidine decarboxylase [Brucella sp. NF 2653] Length = 365 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 54/387 (13%), Positives = 115/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T +++N + + ALK + +V ++ G S E Sbjct: 3 QTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFNLMSEYMDGTTSSSLNE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 63 VRLGHE-KFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERF------ADKASGIK 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP +++++ P L + + + + Sbjct: 116 RGLRLNPGVSSSSFD----------LADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L D+ ++ S H ++ + +GGG+ H + + + + Sbjct: 166 ENSDFSLFDRMLSDIEEKFGSLLHRVEWVSLGGGI----HFTGEDYPVDAFCARLKSFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KFGVQVYLEPGEASITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD GD L + Y V+ +N Sbjct: 276 KAKMAPNNGGHSYMVCGKSCLAGDIFGEFTFDKPLAIGDRLSFKDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V ++R + + Sbjct: 336 KMPA-IAVRELDGTVKLVRE-FDYADF 360 >gi|149019507|ref|ZP_01834826.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP23-BS72] gi|168485870|ref|ZP_02710378.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC1087-00] gi|147930882|gb|EDK81862.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP23-BS72] gi|183571011|gb|EDT91539.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CDC1087-00] gi|332204923|gb|EGJ18988.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA47901] Length = 375 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 79/390 (20%), Positives = 129/390 (33%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + A Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDADLEELLGITDHIVFNS----ERQLRKHGARCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY + Y V++ T Sbjct: 283 PPLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|329113279|ref|ZP_08242062.1| Lysine/ornithine decarboxylase [Acetobacter pomorum DM001] gi|326697420|gb|EGE49078.1| Lysine/ornithine decarboxylase [Acetobacter pomorum DM001] Length = 437 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 78/373 (20%), Positives = 133/373 (35%), Gaps = 21/373 (5%) Query: 21 LAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 LA TP A+ Y A + YA+KAN Q +++ L LGS D Sbjct: 70 LAEQKPATPCLVLDVDAVADRYHALGKALPQ--ARIYYAVKANPAQPILRRLVELGSCFD 127 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S E+ L A + I F K + I A ++G+ F + EL+ L A Sbjct: 128 AASWEEVSLCLQAGASPDAISFGNTVKKVSAIRAAYEAGVRIFVFDCREELEKLAVHAPG 187 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + KFG + L A L + G+ H Sbjct: 188 SRVYCRLLVDNYGA----------EWPLSRKFGTTVESAKELMLAARELG-LDPYGLSFH 236 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 +GSQ E++ A L L + G +++ +++GGG I Y D A Sbjct: 237 VGSQQLSAEAYEVAIARAAALFTDLSAAGLDLRMVNLGGGFPIRYRDDVPEIDHFTTAIF 296 Query: 260 IHQYFGNLQ--CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 ++++EPGRF+V + G++ ++V+ + K + Sbjct: 297 RAMTEHFGNALPEMLVEPGRFIVGEAGVVRSEVVLVSARGRKDGLRWVYLDIGRFGGLAE 356 Query: 318 DAYHEINYIVNPAGDR-LHIHADIVGPICETGDFIAL--NRKIAL-PRPGDLLYIEKTGA 373 I Y + + D + GP C+ D + + ++ L G+ + + GA Sbjct: 357 TENESIRYAIRTSRDGSPTGRVALAGPTCDGADIMYEKTHYELPLDLAAGEQVDLLGAGA 416 Query: 374 YGAVQ-SGTYNSR 385 Y + + +N Sbjct: 417 YVSTYCATGFNGF 429 >gi|307708674|ref|ZP_07645137.1| carboxynorspermidine decarboxylase [Streptococcus mitis NCTC 12261] gi|307615248|gb|EFN94458.1| carboxynorspermidine decarboxylase [Streptococcus mitis NCTC 12261] Length = 375 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 75/382 (19%), Positives = 126/382 (32%), Gaps = 24/382 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLPKLEGNCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + A Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDADLEELLEITNHIVFNS----ERQLRKHGARCRDA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTSDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E+ KA + +Q + H ++ +++GGG I S I Sbjct: 174 QGADDLETTLKAVE------EQFGAYLHQVKWLNMGGGHHITREDYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++ +++ A P + + + Sbjct: 224 RIRETYNLEIYIEPGEAIALNAGYLATEVLDIVENG--MEILVLDASATCHMPDVLEMPY 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A + C TGD I + GD LY E Y V++ T Sbjct: 282 RPPLRNGFAAQEKAHTYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFEDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIR 402 +N L +++ +++ Sbjct: 342 FNGIGLPSLYLMDEQGDCRLVK 363 >gi|152995410|ref|YP_001340245.1| carboxynorspermidine decarboxylase [Marinomonas sp. MWYL1] gi|150836334|gb|ABR70310.1| carboxynorspermidine decarboxylase [Marinomonas sp. MWYL1] Length = 365 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 52/386 (13%), Positives = 106/386 (27%), Gaps = 31/386 (8%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y A+ KN + ALK + +V + G S E+ Sbjct: 4 TPYYLIDKAALLKNLEKIAYVRQQSGAKSLLALKCFATWSVFDLMQDYMDGTTSSSLYEV 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ S FN + Sbjct: 64 KLGKT-KFNGETHAYSVAYSDDEIAEVLDHSDKIIFNSIGQFNRFK-------------- 108 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 V+ D E P L + I+ + + + Sbjct: 109 --DVSKDKTRGLRVNPQVSTSEFLIADPARPFSRLGEWDPEKIATVINDISGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 SF + ++L + ++ ++ + +GGG+ H + + + Sbjct: 167 NNSFERFDEMLNLIEERFGHLIQQVKWVSLGGGI----HFTGEGYPIDKFCQRLKSFAEK 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + L V+ + V+ + +Y ++ Sbjct: 223 YDIQVYLEPGEASITKSTTLEVTVLDTLFNGKNLAVVDSSIEAHMLDLLIYRENAKMAPC 282 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 I G C GD + + GD L + Y V+ +N Sbjct: 283 DG------EHEYMICGKSCLAGDIFGEFKFDKALQVGDRLSFQDAAGYTMVKKNWFNGVK 336 Query: 387 LIPEIMVN--GSQFHIIRPRMTFQEL 410 + I + ++R + + Sbjct: 337 MPS-IAIRQLDGSIELVRE-FDYNDF 360 >gi|242826034|ref|XP_002488560.1| ornithine decarboxylase, putative [Talaromyces stipitatus ATCC 10500] gi|218712378|gb|EED11804.1| ornithine decarboxylase, putative [Talaromyces stipitatus ATCC 10500] Length = 426 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 85/369 (23%), Positives = 136/369 (36%), Gaps = 33/369 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I + + + + + M +A+K N + +++ L LG G D S E++ Sbjct: 64 FFVADLGEIRRQHSRWMSHLP--NIMPFFAVKCNPDVELLQVLKELGVGFDCASVEEMQT 121 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L P+ I+F+ KT + A +GI ++ EL T+ I Sbjct: 122 VLRLGAPSTSIIFANPCKTPHALAFAHGAGIKMTTFDNLDELDTIKNYMPDARLLLRIF- 180 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + + +KFG I L A L + + G+ HIGS Sbjct: 181 ---------ANDSNALVALGEKFGALPDSIQDLLMRAKDL-NLNVVGISFHIGSGASDPS 230 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +F KA R + RS G +Q +D+GGG P ++ S I + Q Sbjct: 231 AFQKAIAHSRQVWDSARSMGFFLQILDIGGGFQP--TEAEFTPMATAIQSAISEASFPGQ 288 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSA--------DKTFVILDVAMNDFMRPTLYDAY 320 + EPGRF V LV ++IS +KS D + V N + + Sbjct: 289 TIFMAEPGRFFARSVFTLVCRIISCRKSKATESPQRVDMLYQNDGVYGNFMNALIEREDF 348 Query: 321 HEINYIVNPAGDRLHIH--ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG--AYGA 376 I R + I GP C++ D ++ AL R G TG AY + Sbjct: 349 APSLIITKGHLPRKSEYHAYTIWGPTCDSTDCVSRKASFALLR-G-----MLTGKPAYTS 402 Query: 377 VQSGTYNSR 385 + +N Sbjct: 403 ATATNFNGF 411 >gi|283798446|ref|ZP_06347599.1| carboxynorspermidine decarboxylase [Clostridium sp. M62/1] gi|291073852|gb|EFE11216.1| carboxynorspermidine decarboxylase [Clostridium sp. M62/1] Length = 395 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 111/386 (28%), Gaps = 21/386 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 V TP++ + KN + + A KA S + +G Sbjct: 26 VSTPYFLIDEERLRKNLEILKKVQEDTGCRILLAQKAFSTFFAYPLIREYLAGSTASGLY 85 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R E VFS + + +L + FN S+ RA Sbjct: 86 EARLGRE-EFGGETHVFSPAYREDEFEELLSYADHLVFNSPSQLRKYGERARAAGKSVGL 144 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + + H + G A + +D + Sbjct: 145 RVNPECSTQ---EGHAIYDPCAPGSRLGTT----------AENFDESLLPLLDGLHFHTL 191 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + S + ++ N++ +++GGG I +I + Sbjct: 192 CEQNSDA-LEQTAAAFEEKFGKYLGNMKWLNLGGGHHITRDD----YDVERLERIISHFR 246 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + LEPG +V + G LV+ V+ ILD + M L Y Sbjct: 247 DTYGLTVYLEPGEAVVLNAGFLVSTVL-ETVKNGIDIAILDTSAACHMPDVLEMPYRPPV 305 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 G++ + GP C GD I G + E Y V++ T+N Sbjct: 306 SDSGLPGEKA-FTFRLAGPTCLAGDVIGDYSFDTPLEAGSQVVFEDMALYTMVKTNTFNG 364 Query: 385 RLLIPEIMVNGSQFHIIRPRMTFQEL 410 L + + + + +++ Sbjct: 365 MALPSIVWRGLDKRETLIKKFGYEDF 390 >gi|209964659|ref|YP_002297574.1| lysine [Rhodospirillum centenum SW] gi|209958125|gb|ACI98761.1| lysine [Rhodospirillum centenum SW] Length = 395 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 72/373 (19%), Positives = 115/373 (30%), Gaps = 16/373 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P YCY + F +AF G V YA+K N V+ L G D S E+ Sbjct: 20 PVYCYRPDELTARARQFVSAFPGH---VLYAVKCNPEPLVLDALWAGGIRHFDTASLQEI 76 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 V + D + G+ F V+ EL+ + + Sbjct: 77 ELVKGHFAAGGCYFMHPVKQRGAVRDAYERMGVRTFVVDHRDELEKVTAETGGARDVTVV 136 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + T + + KFG + Q L A+ G+ H+GSQ Sbjct: 137 -------VRLATARGAAVYDLGGKFGCTVEQGADLLRTAAGRGLK--VGLCFHVGSQCLN 187 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 S+ A +L + I + + + + + Sbjct: 188 PGSYTAALRLAAACQDLAGAELAVIDVGGGFPTAYVGHEPPPLEDYMAAIRTGLETLRRP 247 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 C + EPGR LVA LV +V + L ++ D P + Sbjct: 248 EGCAVWCEPGRGLVATGASLVVRVELRRDRHLYLNDGLYGSLCDLKFPGI--HMPMRAVR 305 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + GP C+ D + + R GD + I + GAY +N Sbjct: 306 PGHAFSDELVPFGLFGPTCDCYDQMPGPYMLPADIREGDWIEIGQCGAYTTATRTWFNGF 365 Query: 386 LLIPEIMVNGSQF 398 + V+ S F Sbjct: 366 FPGRAVRVDDSAF 378 >gi|83956357|ref|ZP_00964782.1| Orn/DAP/Arg decarboxylase, family 2 [Sulfitobacter sp. NAS-14.1] gi|83839405|gb|EAP78588.1| Orn/DAP/Arg decarboxylase, family 2 [Sulfitobacter sp. NAS-14.1] Length = 411 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 92/405 (22%), Positives = 143/405 (35%), Gaps = 38/405 (9%) Query: 41 YLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIV 100 ++N F V ++ K N V + G G D VS EL A P Sbjct: 2 LKVWNNTFAKS--KVYWSYKTNYMPEVCRAAHEHGLGADFVSGFELEHARRM-CPEGPFS 58 Query: 101 FSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI------ 154 F+G K E+ A++ G E + + RVNP + Sbjct: 59 FNGPLKRKSELLQAIEMGATINVDLLEEIDAIRTIVSQRPTLTPRLGIRVNPGVPLFDSH 118 Query: 155 NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV-KISGVDMHIGSQIDQIESFHKA 213 + + +K S KFG PI + A + +S + H+ SQI E F A Sbjct: 119 DTSFLEKHSDSISVSKFGWPISDGAARIAVEKVIDAGLTVSALHCHLSSQITNHEHFLAA 178 Query: 214 FKLLRDLTQQLRSNGHNIQHIDVGGGL--------GIAYHSDHRPPSSSDYASLIHQYFG 265 + + D L G ++ ID+GGG I + R Q F Sbjct: 179 LRPVLDFASDLIGQGVELEEIDIGGGFGVKGLVRDKIGWWGQLRERMGEPLPQEESQAFD 238 Query: 266 NLQC----------------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 I EPGR+LV+D L+T+V+ IK+ KT++++D +N Sbjct: 239 MPSFATSLKTELSERGLEDLTISCEPGRYLVSDAMALLTRVVGIKRLEGKTWLVVDGGLN 298 Query: 310 DFM--RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLL 366 N+ I GP+C GD I + + GDL+ Sbjct: 299 ILPTASFGERRGLRFFNHEGEFPPSDYTEKCSIGGPLCYEGDVIMPSAMMPATIAAGDLV 358 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 I GAY +S +N +L + +GS + R + ++ Sbjct: 359 MISDAGAYTVSRSTNFN-QLRAAAVSFDGSDTQTVWRRENYADVF 402 >gi|226355695|ref|YP_002785435.1| carboxynorspermidine decarboxylase [Deinococcus deserti VCD115] gi|226317685|gb|ACO45681.1| putative carboxynorspermidine decarboxylase [Deinococcus deserti VCD115] Length = 393 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 45/389 (11%), Positives = 106/389 (27%), Gaps = 20/389 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 + +P + + + +N S + A K + + L G G Sbjct: 4 ADIPSPAFVLDESRLRRNLSLISQVQRESGAQIIVAFKGFAMWSAFPLLREYGITGATAS 63 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E + E V++ D + + FN + E Q + Sbjct: 64 SLNE-AILARQEMQGEVHVYAPAYSDEDFPRILELADHLVFNSFGQWERFRP-QVQAARE 121 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + + + + + + + + G+ + + Sbjct: 122 QGRVLHVGIRVNHEYGEVETDLYNPAGPFSRLGVTRREFREDLLDGVDGLHFHSLCENDS 181 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + L ++ ++ ++ GGG + P Sbjct: 182 TT---------LERTLVAFEEKFGEFLGRMKWVNFGGGHLMTRAGYDIPRLIRVIRDFKA 232 Query: 262 QYFGNLQCKI---ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 ++ ++ + +LV+ V +V V + + RP + Sbjct: 233 RHDVHVILEPGSAFGWQTGWLVSSVLDVVHNVKDAAVLDVSVSAHMPDVLEMPYRPRILG 292 Query: 319 AYHEINYIVNPAGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 A + + D + I G C GD I + GD + + Y Sbjct: 293 AGDPPEQGQHRSDDGTAVAAGHPYIIGGTTCLAGDVIGEYIFPQPLQVGDRVVFDDMIHY 352 Query: 375 GAVQSGTYNSRLLIPE-IMVNGSQFHIIR 402 V++ +N I+ ++ I+ Sbjct: 353 TMVKTTFFNGVKHPDIGILRPDGRYDRIK 381 >gi|94265973|ref|ZP_01289697.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1] gi|93453476|gb|EAT03889.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1] Length = 380 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 53/389 (13%), Positives = 116/389 (29%), Gaps = 21/389 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 H V +P Y + + N + A K + + ++ + G Sbjct: 6 VHRVPSPCYVCDSGRLAANLEKLDLVQRRTGARIILAFKGFAMWRLFPQISRVLPGASAS 65 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E R A E V+ + + ++ + S + + + Sbjct: 66 SLDEARLARE-EFGGEVHVYCPAYRDDEFAEMLGYADH--LVFNSCHQWQRFKPLVAADS 122 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + RVNP + + + G+ Q ++ + Sbjct: 123 RPHSCGIRVNPQYSEVAVDLYNPCGPHSRLGVTRAQFRP-----------ELLAGLDGLH 171 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 ++ L ++ ++ +++GGG I LI Sbjct: 172 FHALCEQNADALAGTLAAFHEKFGEFMDGMKWLNMGGGHHITRPD----YDIDQLCRLID 227 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ LEPG + D+G+LV V+ I + ++ ++ A + + + Sbjct: 228 EVRTRYHVQVYLEPGEAIALDIGVLVATVLDIVDNEGRSAILDTSAAAHMP--DVLEMPY 285 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + + G C GD I + G L Y V++ T Sbjct: 286 RPEIFGAGEPGQYPYTYRLGGLSCLAGDVIGEYSFPEPLQIGQRLVFGDMAHYTMVKNNT 345 Query: 382 YNSRLLIPEIMVNGSQFHI-IRPRMTFQE 409 +N L + + H+ + R +++ Sbjct: 346 FNGVRLPSIAIYEPATDHLEVVRRFGYED 374 >gi|271969560|ref|YP_003343756.1| Orn/DAP/Arg decarboxylase 2 [Streptosporangium roseum DSM 43021] gi|270512735|gb|ACZ91013.1| Orn/DAP/Arg decarboxylase 2 [Streptosporangium roseum DSM 43021] Length = 392 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 76/362 (20%), Positives = 134/362 (37%), Gaps = 27/362 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y +++++ A G+ + YA+KAN + +++ LA G ++ S GEL Sbjct: 52 PAYVYDLASLDEHAAAVRAALPGI--ELYYAVKANPDPELLRVLARHVDGFEVSSGGELA 109 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 P R+ G GKT E+ + E +R ++ G++A + Sbjct: 110 HVRGL-FPGARVALGGPGKTDAEL--------FGDVTRLHVESPGELRRLLASGRRADVL 160 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVN D+ G FG+ I A S V++ G+ H+ S ++ Sbjct: 161 LRVNLDVPVAGASLAMGGGA-TPFGMDPGGIAECVALLSGQDAVRLRGIHAHLASGLEAP 219 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 A +L + + I++GGG+ ++Y + Y + + Sbjct: 220 ALLELAAAVLEYARE------LGVTEINLGGGMAVSYAAPDARFDWHSYGEGLARLRRPG 273 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + I EPGR L G VT+VI +K+ + F ++ + P + + Sbjct: 274 EVLRI-EPGRALTVYCGRYVTRVIDVKRVHGELFAVVAGGTHHLRTPATKGHSQPLAAL- 331 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRL 386 IVG +C D +A + GD++ GAY S + Sbjct: 332 -----PPGEPVTIVGQLCTPKDVLAHRVPV-RLAAGDIVEFTMAGAYAWNISHHDFLMHP 385 Query: 387 LI 388 Sbjct: 386 KP 387 >gi|325280295|ref|YP_004252837.1| carboxynorspermidine decarboxylase [Odoribacter splanchnicus DSM 20712] gi|324312104|gb|ADY32657.1| carboxynorspermidine decarboxylase [Odoribacter splanchnicus DSM 20712] Length = 387 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 62/390 (15%), Positives = 116/390 (29%), Gaps = 27/390 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P Y T + N + ALKAN+ ++ L+ G S Sbjct: 15 TVPSPCYVLHETLLADNLRVIDKVRKATGAEIIVALKANAMWSIFPELSRHSDGATASSL 74 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R ++ V + ++ S FN + E + Sbjct: 75 AEARLVFEEYGAPAH-TYAPVYTEGEIGEILNCSNHITFNSLGQYER------FGRRAHR 127 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 A ++ + + +T + P ++ L A + LP + Sbjct: 128 AGVSCGLRVNPEFSTVETDLYNP-----ASPTSRLGILAADLTHLPEGIDGLHFHSLCES 182 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 L + ++ I+ +++GGG + + Sbjct: 183 RPD-----DLRGTLAAVEERFGRFFPQIKWLNMGGGHLMTHKDYDEEELIHILC---DFR 234 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +IILEPG D G LV V + ++L+V+ M L Y Sbjct: 235 SRYPHLRIILEPGSAFTWDTGCLVATVEDKVSNGGVDTLMLNVSFACHMPDCLEMPYKPA 294 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKI--ALPRPGDLLYIEKTGAYGAVQSGT 381 + + + G C GD+ PR GD + Y V++ Sbjct: 295 ILGTHEPAEGEK-RWRMGGNSCLAGDYYGDWAFDGGREPRVGDRIVFRDMIHYTMVKTTM 353 Query: 382 YNSRLLIPEIMVNGSQ--FHIIRPRMTFQE 409 +N I + + F ++R +++ Sbjct: 354 FNGVTHPS-IGIWNPETGFRLVRK-FGYED 381 >gi|239831198|ref|ZP_04679527.1| carboxynorspermidine decarboxylase [Ochrobactrum intermedium LMG 3301] gi|239823465|gb|EEQ95033.1| carboxynorspermidine decarboxylase [Ochrobactrum intermedium LMG 3301] Length = 365 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 57/387 (14%), Positives = 116/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T +++N + + ALK + +V ++ G S E Sbjct: 3 QTPYYLIDKTKLKRNMEKVAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSLNE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 63 VRLGHE-RFGGETHAYSVAYADNEIDEVISHADKIIFNSIGQLERF------ADKASGIK 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP I++++ P L + + V + Sbjct: 116 RGLRLNPGISSSSFD----------LADPARPFSRLGEWDVAKVEKVMDRVTGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L D+ Q+ S + ++ + +GGG+ H ++ + + + Sbjct: 166 ENSDFGLFDRMLTDIEQKFGSLLNRVEWVSLGGGI----HFTGDDYPVDEFCARLKAFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KFGIQVYLEPGEASITKTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD GD L E Y V+ +N Sbjct: 276 KAKMAPNNGEHSYMVCGKSCLAGDIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V ++R + + Sbjct: 336 KMPA-IAVRELDGTVRVVRE-FDYADF 360 >gi|306829507|ref|ZP_07462697.1| carboxynorspermidine decarboxylase [Streptococcus mitis ATCC 6249] gi|304428593|gb|EFM31683.1| carboxynorspermidine decarboxylase [Streptococcus mitis ATCC 6249] Length = 375 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 78/390 (20%), Positives = 127/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A E VF+ K D +L + FN E + Sbjct: 64 LYEAKLARE-EFSGEVHVFAPAFKDADLEELLEITDHIVFNS----ERQLRKHGPRCRAA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ + +I S L V Sbjct: 119 GISVGLRINPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDL-----LDLVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +E+ KA + Q H ++ +++GGG I S I Sbjct: 174 QGSDDLETTLKAVE------AQFGPYLHQVKWLNMGGGHHITREDYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ +EPG + + G L T+V+ I + + ++LD + M L Y Sbjct: 224 RIRETYNLEVYIEPGEAIALNAGYLATEVLDIV-ANEIEVLVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I GD LY E Y V++ T Sbjct: 283 PPLRNGFEAQEKPH-TYRLSSNTCLTGDVIGDYSFENPVEIGDRLYFEDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L ++N ++ +Q+ Sbjct: 342 FNGIGLPSLYLMNEQGDCSLV-KAFGYQDF 370 >gi|94271917|ref|ZP_01292037.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1] gi|93450300|gb|EAT01549.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1] Length = 380 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 52/389 (13%), Positives = 113/389 (29%), Gaps = 21/389 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 V +P Y + + N + A K + + ++ + G Sbjct: 6 VDRVPSPCYVCDSGRLAANLEKLDLVQRRTGARIILAFKGFAMWRLFPQISRVLPGASAS 65 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E R A E V+ + + ++ + FN + + A S Sbjct: 66 SLDEARLARE-EFGGEVHVYCPAYRDDEFAEMLGYADHLVFNSCHQWQRFKPLVAADSRP 124 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I + + + G+ Q ++ + Sbjct: 125 HSCGIRVNPQY--SEVAVDLYNPCGPHSRLGVTRAQFRP-----------ELLAGLDGLH 171 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 ++ L ++ ++ +++GGG I LI Sbjct: 172 FHALCEQNADALAGTLAAFHEKFGEFMDGMKWLNMGGGHHITRPD----YDIDQLCRLID 227 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ LEPG + D+G+LV V+ I + ++ ++ A + + + Sbjct: 228 EVRTRYHVQVYLEPGEAIALDIGVLVATVLDIVDNEGRSAILDTSAAAHMP--DVLEMPY 285 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + + G C GD I + G L Y V++ T Sbjct: 286 RPEIFGAGEPGQYPYTYRLGGLSCLAGDVIGEYSFPEPLQIGQRLLFGDMAHYTMVKNNT 345 Query: 382 YNSRLLIPEIMVNGSQFHI-IRPRMTFQE 409 +N L + + H+ + R +++ Sbjct: 346 FNGVRLPSIAIYEPATDHLEVVRRFGYED 374 >gi|332716887|ref|YP_004444353.1| carboxynorspermidine decarboxylase [Agrobacterium sp. H13-3] gi|325063572|gb|ADY67262.1| carboxynorspermidine decarboxylase [Agrobacterium sp. H13-3] Length = 365 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 51/387 (13%), Positives = 103/387 (26%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T + +N + + ALK + +V ++ G S E Sbjct: 3 QTPYYLIDKTKLLRNMEKIAYVREKSGAKALLALKCFATWSVFDFMSQYMDGTTSSSLYE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN S+ E Sbjct: 63 VRLGRE-KFSGETHAYSVAYADYEIDEVISNADKIIFNSISQLERFAEKA---------- 111 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I P L + + + + Sbjct: 112 ------SGITRGLRLNPQVSSSSFDLADPARPFSRLGEWDVAKVDKVMDRISGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L + ++ S + + +GGG+ H + + + Sbjct: 166 ENGDFSLFDRMLTQIEEKFGSLLSRAEWVSLGGGI----HFTGDNYPLDQFCDRLAAFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KYGVQVYLEPGEASITKSTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + G C GD R + GD + E Y V+ +N Sbjct: 276 TAKVLPNEGEHPYMVCGKSCLAGDIFGDFRFDKELKVGDRISFEDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I + +R F + Sbjct: 336 KMPA-IAIKELDGSVRAVRE-FDFADF 360 >gi|150376298|ref|YP_001312894.1| carboxynorspermidine decarboxylase [Sinorhizobium medicae WSM419] gi|150030845|gb|ABR62961.1| carboxynorspermidine decarboxylase [Sinorhizobium medicae WSM419] Length = 365 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 51/386 (13%), Positives = 108/386 (27%), Gaps = 31/386 (8%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + + +N ++ + ALK + +V + G S E+ Sbjct: 4 TPYYLIDKSKLIRNMEKIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEV 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R E +S + ++ L + FN S+ E Sbjct: 64 RLGRE-KFGKETHAYSVAYGDNEIDEVVLHADKIIFNSISQLERY--------------- 107 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 I P L + + ++ + + Sbjct: 108 -AERAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVAKVERVMDRINGFMIHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++F LL + ++ S + +GGG+ H +++ + + Sbjct: 167 NKNFDLFDCLLAQIEERFGSLLERADWVSLGGGI----HFTGDDYPVDTFSARLRAFSDR 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + L V+ + ++ + +Y Sbjct: 223 YDVQVYLEPGEASITKSTTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIY------RET 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + + I G C GD R + GD + + Y V+ +N Sbjct: 277 AKVSPNEGPHSYMICGKSCLAGDVFGEFRFADALKVGDRISFQDAAGYTMVKKNWFNGVK 336 Query: 387 LIPEIMVN--GSQFHIIRPRMTFQEL 410 + I + +R T+ + Sbjct: 337 MPA-IAIKELDGSVRTVRE-FTYADF 360 >gi|33591910|ref|NP_879554.1| carboxynorspermidine decarboxylase [Bordetella pertussis Tohama I] gi|33598196|ref|NP_885839.1| carboxynorspermidine decarboxylase [Bordetella parapertussis 12822] gi|33603092|ref|NP_890652.1| carboxynorspermidine decarboxylase [Bordetella bronchiseptica RB50] gi|33566754|emb|CAE38967.1| carboxynorspermidine decarboxylase [Bordetella parapertussis] gi|33568723|emb|CAE34481.1| carboxynorspermidine decarboxylase [Bordetella bronchiseptica RB50] gi|33571554|emb|CAE41037.1| carboxynorspermidine decarboxylase [Bordetella pertussis Tohama I] gi|332381327|gb|AEE66174.1| carboxynorspermidine decarboxylase [Bordetella pertussis CS] Length = 365 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 64/379 (16%), Positives = 121/379 (31%), Gaps = 30/379 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y A+ +N + V ALK + +V + G S E+ Sbjct: 4 TPYYLIDKRALLQNLEVIRRIRERSGAKVLLALKCFATWSVFDLMREYMDGTTSSSLFEV 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R E +S D D+ + FN S+ E A+ G Sbjct: 64 RLGRE-KFGGETHAYSVAYAEDDIDDVVACADKIIFNSLSQLERYAPRASAIPRG----- 117 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP I+ + + + + + G L A +P + V + Sbjct: 118 -LRLNPGISVSGYDLANPARPFSRLGET-----DLDRIAQAMPMIDGFMVH-----NNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F + LL +L + I I +GGG+ H + + + ++ Sbjct: 167 NRDFTRFDALLTELEHRYGHLLGQINWISLGGGI----HFTEPGYALDAFCDRLRRFSEQ 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + + L V+ + ++ ++ + +Y Sbjct: 223 YGVQVYLEPGEAAITNTATLEVTVLDVMRNEKNLAIVDAATEAHMLDLLIY------RMS 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 D+ I G C GD + +PG + I+ Y V+ +N Sbjct: 277 ARVQPDQGPHRYVIYGNSCLAGDVFGEFSFESPLQPGSRISIQDAAGYTMVKKNWFNGVR 336 Query: 387 LIPEIMVN--GSQFHIIRP 403 + I + + ++R Sbjct: 337 MPA-IAIRELDGEIRLVRE 354 >gi|307566321|ref|ZP_07628760.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Prevotella amnii CRIS 21A-A] gi|307344898|gb|EFN90296.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Prevotella amnii CRIS 21A-A] Length = 400 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 78/412 (18%), Positives = 139/412 (33%), Gaps = 21/412 (5%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKA 61 + E + N+S TP + ++K+ F A D ++++ Y++K Sbjct: 1 MEVIEKMMTISNLS---------TPCFILKEEELKKSIYGFKTALDTKFPNSIIGYSVKT 51 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI-DLALQSGIY 120 NS +K G ++VS E R AL P I+++G K+ D D+ GI Sbjct: 52 NSLPYCLKIAKDNGCYAEVVSYHEYRLALTCGFPKNHIIYNGPMKSKDTFLDVLKHKGIV 111 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 E E +S + + R+N DI+ + + + + +FG Sbjct: 112 NIESFREIEWLRE----LSCNEIYKVGIRLNIDISKISPLDENHKEDDSRFGFSADSADF 167 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 A + V + +K + + + GG Sbjct: 168 KNAIQQISEYSNVRLV--GLHIHRTSKTRSVDFYKNTLTYALSVINKYNLNIEYIDLGGG 225 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 + A N KII+EPG +VA V VI +K DK Sbjct: 226 YFGEMPGKPTYADYVDAFYDVLKHSNNNYKIIVEPGNAIVASAFDYVCTVIDVKHHNDKN 285 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD-FIALNRKIAL 359 V D ND P + + ++I + ++ + G C D L + Sbjct: 286 VVTTDGTRNDVD-PLFHKTDYFKSFIYKKSSEKCQHKQLVGGLTCLENDRLFVLEKGETT 344 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 GD + + GAY + + + G ++ ++R T ++ I Sbjct: 345 LCLGDKIVFNRVGAYTLCLTPLFIHYF-PVIYVKRGDEYCVVREEWTEKDFI 395 >gi|212551101|ref|YP_002309418.1| carboxynorspermidine decarboxylase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549339|dbj|BAG84007.1| carboxynorspermidine decarboxylase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 380 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 114/388 (29%), Gaps = 21/388 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + +P Y + KN + + + A KA + + + S Sbjct: 6 KIPSPAYVIEEKLLRKNLSLIKSVQEQAGIKIILAFKAFAMWKSFPIIREYVNYSAASSA 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A + T +E + S S+ ++ ++ K Sbjct: 66 WEARLA--LEKMGSKAHTYSPAYTEEEFPVIKSC-SSHITFNSMSQFYRFYKKTLNNLTK 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL-YAYASTLPGVKISGVDMHIGS 202 R+NP+ + + + GI ++ + L + + + Sbjct: 123 ISCGLRINPEYSEVRTSLYNPVVSGSRLGITREELGNNLPEGIEGLHFHTLFESNSYALE 182 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + I+ +++GGG I + + Sbjct: 183 NTLNH------------VEDKFGDLFSKIKWLNMGGGHLITQENYSITHLIELL---QNF 227 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 +IILEPG V G+LV+ V+ I K+ IL+++ M L Y Sbjct: 228 RKKYPHLQIILEPGAAFVWQTGVLVSSVVDIVKNNRVETAILNISFTCHMPDCLEMPYQP 287 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + G C +GDFI + GD + E Y V++ + Sbjct: 288 RIRGALQKVIEGKPTYRMGGNSCLSGDFIGDWSFNEELKIGDKIIFEDMIHYTVVKTTMF 347 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 N + + I R + + Sbjct: 348 NGIPHPDIYIWKINDKLEIYRK-FNYDD 374 >gi|91791946|ref|YP_561597.1| Orn/DAP/Arg decarboxylase 2 [Shewanella denitrificans OS217] gi|91713948|gb|ABE53874.1| Orn/DAP/Arg decarboxylase 2 [Shewanella denitrificans OS217] Length = 405 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 82/379 (21%), Positives = 143/379 (37%), Gaps = 12/379 (3%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + Y + + T ++ YA+KANS+ A+++ L G ++ S GE+ + Sbjct: 20 AFIYDLDQLSAHIRTMTSRLPK-QVDCYYAIKANSDSAILRALLPHVYGFEVASMGEIEK 78 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A I F G GKTI E+ AL + +++ESE +L LNQ A + Sbjct: 79 VR-AISQNVPIAFGGPGKTITELTRALTLNVQLYHLESELQLARLNQLAKEQNQLVRCLL 137 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 RVNP + + G+ +FGI ++ +L P +++ G+ H S Sbjct: 138 RVNPYFDLPSATLQMAGQA-TQFGIDERELLALLPRLGDYPNIQVEGLHFHCLSNNLDAV 196 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + + GG + YA + + Sbjct: 197 KHVTLVRHYLQTASTWAAQFGLTWTTVNIGGGIGVTYQGETEFDFPLYAEQLTLLCRDYP 256 Query: 269 C-KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + E GR++ AD G+ +T+V IK S ++ F +L + F P+ + H Sbjct: 257 QLHLATECGRYISADCGVYLTEVTDIKLSHNEYFAVLRGGTHHFRLPSSWQHSHPFKIYP 316 Query: 328 NPAGDRL-------HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + G +C D +A N +A + D++ +K GAYG S Sbjct: 317 RETWHYPFTRPSVTDTAITLCGELCTPKDVLAKNVHVAQLKVADVIVFQKAGAYGWHISH 376 Query: 381 T-YNSRLLIPEIMVNGSQF 398 + S + + +QF Sbjct: 377 HDFLSHPHPQRLYIKENQF 395 >gi|326494872|dbj|BAJ94555.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 503 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 76/404 (18%), Positives = 139/404 (34%), Gaps = 44/404 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ +A+ ++ + + G + YA K V+ L+ LG D S E ++ Sbjct: 105 FFVADLSAVYESVKMWRESAIGDRVEIFYAAKCCPTLPVLHLLSLLGVNFDCASTAEFQQ 164 Query: 89 --ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 +L + ERI+F+ K I A + + ++ EL + + + I Sbjct: 165 VLSLPSAPSPERIIFANPCKAPSMIRAAADAHVDMMTFDNADELYKVKKAHPNAKLVLRI 224 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 T S + K+G P+ L A A L G+ + GV H+GS Sbjct: 225 L----------TDDSKSLCRLGLKYGAPLETCPGLLALAQQL-GLNVIGVSFHVGSGCKD 273 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F A R + + G++ + +D+GGG ++ + Sbjct: 274 PAQFSDAIWRSRKVFDMGKKVGYDFKFLDIGGGFERPTFAEMSDVVRDAL---DVYFPRE 330 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK-------------SADKTFVILDVAMNDFMR 313 ++I EPGR LV+ L T +I+ ++ ++ + Sbjct: 331 SGVRVIAEPGRLLVSSAFTLATNIIARRRALEPASVAAQEEGEGADVMYYINDGVYGSFN 390 Query: 314 PTLYDAYHEINYIVNPAGD-----------RLHIHADIVGPICETGDFIALNRKIAL-PR 361 L+D +++ A I GP C++ D + ++ + Sbjct: 391 CILFDHVTPDTHLLTHQHQYVGATRQALEGTNTEMASIWGPTCDSMDCVRSLVRLPAGLQ 450 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ---FHIIR 402 GD L GAY + +N P G + I+R Sbjct: 451 VGDWLGWSNMGAYTLCAASRFNGMNKSPVNWTTGGESKDAKIVR 494 >gi|317508088|ref|ZP_07965772.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC BAA-974] gi|316253599|gb|EFV12985.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC BAA-974] Length = 421 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 83/375 (22%), Positives = 139/375 (37%), Gaps = 28/375 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 +P + + Y + A + YA+KAN V++ LA +GS D+ S E Sbjct: 52 PSPCVVIDLATVRERYWQLTAALPS--ARMYYAVKANPAPEVVRELATIGSSFDVASVPE 109 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + LA A+ + + K +I A + G+ + +SE++L+ L + A Sbjct: 110 IELCLAEGASAQNLCYGNTIKKRADIARAYELGVRLYTTDSEADLEALAEHAPGSSVFCR 169 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + KFG SL A L V GV H GSQ Sbjct: 170 V----------QAAGHGAVYSFGSKFGCSPELAESLLLRAGKLGLV-AGGVSFHAGSQQL 218 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 ++ + + +L + G + +++GGGL +Y P A Sbjct: 219 DPSAWSAGIEQAASIASRLAAQGVRLPLLNIGGGLPGSYTQSAPPLGDYADAISAAAREH 278 Query: 266 N-----LQCKIILEPGRFLVADVGILVTKV---ISIKKSADKTFVILDVAMNDFMRPTLY 317 +++LEPGRFLVAD G+L ++V + +V +D + + T Sbjct: 279 FAAVGLEAPQLVLEPGRFLVADAGLLRSEVVLISRKSPEDEHRWVYVDAGRYNGLTETEG 338 Query: 318 DAYHEINYIVNPAGDRLH---IHADIVGPICETGDFIAL---NRKIALPRPGDLLYIEKT 371 + + G+ + GP C+ D + R + R GD L T Sbjct: 339 ECVAYLISSPEHTGEEAESESGPVYLAGPTCDGDDVLYQRTVYRLPSALRVGDHLDFLST 398 Query: 372 GAYGAVQSG-TYNSR 385 GAY A + +N Sbjct: 399 GAYTASYASIAFNGF 413 >gi|153813546|ref|ZP_01966214.1| hypothetical protein RUMOBE_03968 [Ruminococcus obeum ATCC 29174] gi|149830346|gb|EDM85438.1| hypothetical protein RUMOBE_03968 [Ruminococcus obeum ATCC 29174] Length = 404 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 106/362 (29%), Gaps = 13/362 (3%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP Y A+ KN + + A KA SN + +G + E Sbjct: 26 TPCYILDEKALIKNAKLLGEVSERTGCKMLLAQKAFSNYDCYRFFEPYLAGTEASGLFEA 85 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R E VF + D +L + FN S+ + I Sbjct: 86 RLGAEEMPGKEVHVFCAGYRADDFEELLQYADHIVFNSPSQLLRFGAKAKVAGKSVGLRI 145 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + H + G Q + ++ + + Sbjct: 146 NPECSTQ---EGHDIYDPCAPGSRMGTTRAQWDEAFQ-----KNPELLDLLDGLHFHTLC 197 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + L + + ++ I+ GGG I I Sbjct: 198 EQDSDDLETTLVSVKKHFGDLASRVKWINFGGGHHITRPG----YDIERLERCIRMVQEE 253 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + ++ LEPG + G L+T V+ + K+ + I+D + M L Y Sbjct: 254 WKAEVYLEPGEAWALNAGFLLTSVLDVLKNGETQIAIVDASAACHMPDVLEMPYLPPLLG 313 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + + I + G C +GD I + LP GDLL Y ++ T+N Sbjct: 314 TDETEEGG-ITVRLGGSTCLSGDVIGEYKFRQLPEYGDLLMFGDMAIYTTCKNNTFNGMS 372 Query: 387 LI 388 L Sbjct: 373 LP 374 >gi|145502813|ref|XP_001437384.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124404534|emb|CAK69987.1| unnamed protein product [Paramecium tetraurelia] Length = 514 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 72/373 (19%), Positives = 140/373 (37%), Gaps = 32/373 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH--LGSGLDIVSEGEL 86 F Y++ ++ + A + YA+K+N ++K + G+ D S+GE+ Sbjct: 141 FMIYNSNELKNKVNQWKQALPWITP--YYAIKSNPIDPILKVIVDGPYGT-FDCASKGEI 197 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + + VP +IV+S K +I A G+ + ++ EL + + A + I Sbjct: 198 STVIKSGVPGSKIVYSNPVKEEKDIQYAKSMGVEITSADTIDELIKIQKIAPEMKILWRI 257 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV--KISGVDMHIGSQI 204 + + + KFG I + + + + + ++ G+ H GS + Sbjct: 258 SI-------VEENPEQMATVFSGKFGDDIPDLDAAHKRFQQIQQMGIQLHGIHFHCGSAV 310 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 SF KA L ++ + R GH + +DVGGG + +L Sbjct: 311 QGSSSFGKAIDLAKECMKIGRLYGHKMILLDVGGG------FPTGNIQENIINALKKTEN 364 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 L ++I EPGR A+ L+ ++++ + + ++ ++ L D N Sbjct: 365 DPLGYEVIAEPGRHFSANTCYLLFRIMTKRIKHGRLCYHVNESLYHSFNCVLMDGITFEN 424 Query: 325 YI-----------VNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 + H + I G C+ D +A N + + GD L + G Sbjct: 425 ENDQLYSVFNSDGSQNTQNSDHSNVSIFGMTCDGHDALAKNITLPSDMQVGDWLCMSGMG 484 Query: 373 AYGAVQSGTYNSR 385 +Y +N Sbjct: 485 SYTIGPKSRFNGM 497 >gi|281340152|gb|EFB15736.1| hypothetical protein PANDA_011627 [Ailuropoda melanoleuca] Length = 460 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 75/391 (19%), Positives = 125/391 (31%), Gaps = 42/391 (10%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQIKP--FYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I++ K + +I A + G+ ++E ELK +++ + IA Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKIGVNIMTCDNEVELKKISRNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L +I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +D+GGG L + Sbjct: 207 VYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVIS-PLLDVYFPEGSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY-------- 320 KII EPG + V+ L +I+ K + F +Y Sbjct: 266 VKIISEPGSYYVSSAFTLAVNIIAKKVVENDKFSSGVEKTGSDEPAFMYYMNDGVYGSFA 325 Query: 321 --------------------HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 + + D + + GP C+ D I + + Sbjct: 326 SKLSEDLNTIPEVHKASCITNNRTAYLKYKEDEPLFTSSLWGPSCDELDQIVESCLLPEL 385 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 GD L + GA + +N Sbjct: 386 NVGDWLIFDNMGADSLHEPSAFNDFQRPAIY 416 >gi|123493664|ref|XP_001326341.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] gi|121909254|gb|EAY14118.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Trichomonas vaginalis G3] Length = 397 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 90/364 (24%), Positives = 140/364 (38%), Gaps = 20/364 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I ++ + + + YA+K ++K LA G D SE E+RR Sbjct: 33 FWIADFNRIRRSLALWEENLSRL--HIHYAMKCCDEPELLKFLADRGVAYDCASEDEIRR 90 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V A RIVF+ K+ID I A ++G+ ++ESEL+ + + I Sbjct: 91 ILALGVDANRIVFAHPIKSIDSIKYAKENGVTRLVYDTESELRKILRYYPEAEVFLRIKP 150 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R + +KFG ++ L AS L G H+GS D I Sbjct: 151 RFTHA----------KIQLSNKFGADPKEVPKLMQLASELGA-NFIGFSFHVGSLCDDIT 199 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD--YASLIHQYFGN 266 +F A + + +L + G N+ ID+GGG + + I + F Sbjct: 200 TFRVALEYVAELKAKAEQLGLNVSFIDIGGGFLPPSIKAKYTFAEIAEAINTAIDELFDG 259 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKT-----FVILDVAMNDFMRPTLYDAYH 321 + + + EPGRF+ +D LV VI +K+ D I + F A Sbjct: 260 DEIEFLAEPGRFIASDFMDLVMPVICVKEHHDPDGDEQAVFIAEGIYGAFNALNYDHAEP 319 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A + I + G C++ D + GD L IEK GAY + Sbjct: 320 HFLIRTEGASEGEMIKTRLWGQTCDSEDLVYEELSWPRLEVGDYLMIEKFGAYTYAPTSF 379 Query: 382 YNSR 385 +N Sbjct: 380 FNGF 383 >gi|258648530|ref|ZP_05735999.1| carboxynorspermidine decarboxylase [Prevotella tannerae ATCC 51259] gi|260851301|gb|EEX71170.1| carboxynorspermidine decarboxylase [Prevotella tannerae ATCC 51259] Length = 382 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 63/390 (16%), Positives = 113/390 (28%), Gaps = 24/390 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + N + A KA + + S E Sbjct: 4 TPYYRIEERLLRNNLALIRRTANEAGVEFILAFKAFALWKTFFIFRDYIAHTTASSPNEA 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R A + + D ++ S + + R V GK Sbjct: 64 RLAF--EEFGSKAHTYSPAYEDKDFDTIMRC-SSHITFNSLQQFEHFYPRIVENGKLISC 120 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP + + +FGI A LP GV+ + Sbjct: 121 GLRINPQYSEIETTLYNPCAPGSRFGI----------LAEQLPDQLPEGVEGFHCHNHCE 170 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + L + + I+ +++GGG + S +Y Sbjct: 171 SSAAA-LVHTLEHIEARFGKWLPAIKWLNLGGGHLLTRKDYDVRLLIDTLKSFKARYPQL 229 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +ILEPG G L V+ I ++ IL+V+ M L Y Sbjct: 230 H---LILEPGSAFAWQTGDLFASVVDIVENDGIKTAILNVSFTCHMPDCLEMPYWPAIRG 286 Query: 327 VNP-------AGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +R + + G C +GDF+ R + GD + Y V++ Sbjct: 287 AETLEPPQAAGREREPLVYRLGGNSCLSGDFMGYWRFEQPLQIGDTIRFSDMIHYTTVKT 346 Query: 380 GTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 +N +++ + + R +++ Sbjct: 347 NMFNGIPHPSLVLLRENGEEELLRRFGYED 376 >gi|312961468|ref|ZP_07775970.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens WH6] gi|311284265|gb|EFQ62844.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens WH6] Length = 365 Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats. Identities = 51/387 (13%), Positives = 112/387 (28%), Gaps = 29/387 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + N + + ALK + +V + G S EL Sbjct: 4 TPYYLIDKQKLLVNMQKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ S S+L+ +R+ + + Sbjct: 64 KLGRQ-KFEGEAHAYSVAWADDEIEEMLD--NCDKIIFNSISQLQRFAERSEGKTRGLRV 120 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 +V+ + P L + I + + + Sbjct: 121 NPQVSS--------------SDYLLADPARPFSRLGEWDPVKIEGVIEQISGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F K+L + ++ + H ++ + +GGG+ H + + + + + Sbjct: 167 NGDFSLFDKMLGTIEERFGALLHKVKWVSLGGGI----HFTGEGYALDAFCARLKAFSEK 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + + L V+ + V+ + +Y Sbjct: 223 YGVQVYLEPGEAAITNSASLEVTVLDTLYNGKNLAVVDSSIEAHLLALLIY------RLN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A + G C GD + GD L T Y V+ +N Sbjct: 277 AKLAPSEGEHTVMVCGKSCLAGDIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLK 336 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQELIE 412 + ++ ++R + + + Sbjct: 337 MPSIVVKQLDGTVEVVRE-FGYDDYLS 362 >gi|329895585|ref|ZP_08271081.1| Carboxynorspermidine decarboxylase, putative [gamma proteobacterium IMCC3088] gi|328922264|gb|EGG29614.1| Carboxynorspermidine decarboxylase, putative [gamma proteobacterium IMCC3088] Length = 387 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 70/406 (17%), Positives = 122/406 (30%), Gaps = 26/406 (6%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 + L +L +P + A+++N V ALKA S + Sbjct: 5 FGRLDLYQL----PSPCWVVDEVAVQRNLDILHEVGAKSGAKVLAALKAFSMFELAPLYK 60 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 + G E A P E VFS D + + FN + Sbjct: 61 NRVWGTCSSGLHEALLAKE-FYPGEVHVFSAAYSQADLEKILEIADHVVFNSVQQWRRFK 119 Query: 133 L-NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 Q A + RVNP+ + + GIP Q L Sbjct: 120 PLCQAAQARRTHLSFGLRVNPEHSEGDVPLYDPCAPGSRLGIPRSQ----------LQIE 169 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 G+ + + F + + L ++ + ++ GGG +H Sbjct: 170 DFEGISGLHFHTLCEH-PFEPLARTVAALEERFGDILSGLNWVNFGGG----HHITAEGY 224 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 +LI + Q ++ LEPG + G+LV++V+ + + + Sbjct: 225 DRDGLIALIQSFSAKYQVQVYLEPGEAVAIGTGVLVSEVLDVTYTD--RPQAILDTSATC 282 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 P + + + L + G C GD + A G L E Sbjct: 283 HMPDTLEMPYRALISGAGEANELSYTYRLGGLTCLAGDVMGDYSFAAPLDVGQRLMFEDM 342 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGSQFHI-IRPRMTFQELIELDSI 416 Y V++ T+N L + N + I R + + D + Sbjct: 343 SHYTMVKTSTFNGTKLPAIAVWNSDTNAVRIVRRFEYHDF--RDRL 386 >gi|90579305|ref|ZP_01235115.1| Orn/DAP/Arg decarboxylase, family 2 [Vibrio angustum S14] gi|90440138|gb|EAS65319.1| Orn/DAP/Arg decarboxylase, family 2 [Vibrio angustum S14] Length = 404 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 79/410 (19%), Positives = 138/410 (33%), Gaps = 30/410 (7%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLG 75 LEKL+ V +Y + E N+ +AF+ +T + Y+ K N + K + G Sbjct: 6 LEKLSEVYGDSYYLLDSKKFEDNFECLLDAFNSIYSNTKIGYSYKTNYIPKLCKIIDIKG 65 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS+ E A+ V ERI+ +G K + ++ L + Sbjct: 66 GYAEVVSDMEYDLAIKLGVEPERIIVNGPYKPKNILEKFLLNKSIVNLDSFVEIEYLKEI 125 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R N DI +FGI I+ L + Sbjct: 126 ALKNPTNMIEFGIRCNFDI---------HNNVVSRFGIDINNPDLLKKLKEISEIKNVKF 176 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS-----DHRP 250 V I + + + + + ++ID+GGG Sbjct: 177 V--GIHCHYPDRNADSYSVRAKKIIEVASSLFTTPPKYIDIGGGFFGKMDERLKKQFSSY 234 Query: 251 PSSSDYASLIHQYFGNLQ--------CKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 +YA+ I F + LEPG LVAD V +VI IK Sbjct: 235 HDYKEYANNIATEFKRAYSALPKEEQPILFLEPGSALVADTMKFVCRVIDIKNIRGTNIA 294 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 + + + + ++ D+++ DI G C D++ L + Sbjct: 295 MTSGSKFNIGLLSS-TVNMPLDVHSKYINDKVNE-YDISGFTCIESDYLFKGYTGCLFQ- 351 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIE 412 GD L G+Y V + +P I + G+ +I+ + T ++ E Sbjct: 352 GDFLIFNNVGSYSIVFKPPFI-LPNVPIIELTGNSVELIKRQETVDDIFE 400 >gi|209965013|ref|YP_002297928.1| lysine [Rhodospirillum centenum SW] gi|209958479|gb|ACI99115.1| lysine [Rhodospirillum centenum SW] Length = 415 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 75/372 (20%), Positives = 114/372 (30%), Gaps = 14/372 (3%) Query: 28 PFYCYSTTAIEKNYLTFSNAF-DGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 P +C ++ F AF + + V YA+K N + AV++ L G D S E Sbjct: 38 PLHCLRPAVLKATARRFVAAFTEAVGGDVLYAVKCNPDPAVLRALWKGGVRHFDCASPAE 97 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R + A V + G+ F ++S EL L + Sbjct: 98 VRVVRSMFPEAVIHYMHPVKNRAAIRVAYRELGVRDFALDSVEELAKLREETGDARDLGL 157 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I P NA T KFG L A L GV H+GSQ Sbjct: 158 IVRLALPKGNA-------TYDLSGKFGAAPDAAAGLLRRARALSPR--IGVCFHVGSQCL 208 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 +S+ A +L + + + + I Sbjct: 209 TPDSYGDALRLAGGVIRASGVPVDVVDVGGGFPVSYPDMTPPPLDAYMEAIRAGIAGLGL 268 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ EPGR LVA V K+ D+ FV V + + Sbjct: 269 PAGTRVWCEPGRALVA--AGSSVVVQVEKRRGDELFVNDGVYGSLSDAGVPAFRFPCRLV 326 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNS 384 + GP C++ D + + R GD + I + GAYGA +N Sbjct: 327 RPAGTDTAPLMPFSFWGPTCDSADRMKGPFLLPADVREGDWIEIGQLGAYGATLRTEFNG 386 Query: 385 RLLIPEIMVNGS 396 + V Sbjct: 387 FDQARLVEVADG 398 >gi|149204798|ref|ZP_01881761.1| putative carboxynorspermidine decarboxylase protein [Roseovarius sp. TM1035] gi|149141767|gb|EDM29820.1| putative carboxynorspermidine decarboxylase protein [Roseovarius sp. TM1035] Length = 364 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 109/391 (27%), Gaps = 40/391 (10%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP+Y + +N ALK + + T+ G S E Sbjct: 3 PTPYYLIDEDRLLQNMRKIERLRALSGAKALLALKCFATWSAFPTMKPYMDGTTSSSLFE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 LR + Q S++E++ A + Sbjct: 63 LRLGR---------------------EKFGQETHAYSVAWSDAEIEEAVSYADKIIFNTV 101 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI----SGVDMHIG 201 + +A + + + + ++ KI + + Sbjct: 102 GQLQRYDSQSAGIERGLRLNPRFSTSSFDLADPARPFSRLGEWEVNKILGVIDRISGVMI 161 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + F + L + + +Q + +GGG+ H + A+ + Sbjct: 162 HYNCENRDFDLFDQQLTRIEDEFGPVLERLQWVSLGGGI----HFTGDDYPLEELAARLK 217 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 Q+ ++ LEPG + L V+ + + ++ + +Y Sbjct: 218 QFAEKFDVQVYLEPGEAAITGTTTLEVTVLDLLDNGKDLAIVDSSTEAHMLDLLIYRESA 277 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 ++ I G C GD R A GD + I Y V+ Sbjct: 278 KLPQDGAH-------TYQICGKSCLAGDIFGEARFAAPLSIGDRISIGDAAGYTMVKKNW 330 Query: 382 YNSRLLIPEIMVN--GSQFHIIRPRMTFQEL 410 +N + I + + +IR TF++ Sbjct: 331 FNGVNMPA-IAIRRADGRIDVIRS-FTFEDF 359 >gi|212715296|ref|ZP_03323424.1| hypothetical protein BIFCAT_00188 [Bifidobacterium catenulatum DSM 16992] gi|212661753|gb|EEB22328.1| hypothetical protein BIFCAT_00188 [Bifidobacterium catenulatum DSM 16992] Length = 529 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 24/256 (9%) Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLG 241 +++ GV HIGS I ++F +A K + L + ++ + + +D+GGG Sbjct: 273 EIYRHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYS 332 Query: 242 IAYHSDHRPPSSSD-------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 +AY + +++ G I EPGR+ VA G+ + +V Sbjct: 333 VAYTDGEDSMDLDTELARLASAVTTVNRALGMPAPVISFEPGRWTVAPTGVTLYRVGTVK 392 Query: 291 ----------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI 340 + ++ +V +D M+D +RP LY + + I N G + Sbjct: 393 PVQLAGTAKDKAGNPVTERVYVSVDGGMSDNIRPALYGSDY-TAKIANREGSSETKLCRV 451 Query: 341 VGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 VG CE+GD I ++ + GD+L + TGAYG + YN L+ + V+ H Sbjct: 452 VGMHCESGDIIVNEVRLPADIQRGDVLAVPVTGAYGRTMASNYNQALIPAVVAVSEQDAH 511 Query: 400 IIRPRMTFQELIELDS 415 ++ R T ++L++ D Sbjct: 512 VMIRRQTVEDLLDWDV 527 Score = 92.6 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 4/173 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKAN 62 +G + + E L + +P Y T + F +NAF+ T V +A KA Sbjct: 18 EQGEITFHGRTAESLLNEFGSPLYVIDTDDVRVRATKFVKSAANAFNNTVTHVSFAGKAL 77 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 ++ + + + G +D + GE+R ALAA VP R+V G K+ EI+LA+ G Sbjct: 78 LSKEICRIVTESGMLIDTCTMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAITEGFAKI 137 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 V+ +E + + A LGK+A + RV I+A H+ +ST ++ KFG+ + Sbjct: 138 VVDEPNEPARIAEIAKRLGKRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 190 >gi|260913630|ref|ZP_05920106.1| carboxynorspermidine decarboxylase [Pasteurella dagmatis ATCC 43325] gi|260632169|gb|EEX50344.1| carboxynorspermidine decarboxylase [Pasteurella dagmatis ATCC 43325] Length = 371 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 46/379 (12%), Positives = 108/379 (28%), Gaps = 24/379 (6%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y + + +N + + ALK + V ++ G S E Sbjct: 5 QTPYYLIDKSKLLRNMEKIAYLREKSGAKALLALKCFATWGVFDFMSQYMDGTTSSSLYE 64 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++ E +S + ++ ++ + + Sbjct: 65 VQLGKE-KFGGETHAYSVAYSNEEIDEVVAN----------------ADKIIFNSINQLQ 107 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 D+ P L + + + + Sbjct: 108 RFANRTGDLPRGLRVNPRVSTSSFLLADPARPYSRLGEWDINKIREVMPLITGFMFHNNC 167 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + E F K ++L + + H ++ + +GGG+ H +A + Q+ Sbjct: 168 ENEDFDKFCEMLDRIENEFGELLHQVKWVSLGGGI----HFTGENYPLEAFAERLKQFSD 223 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ I + + ++ + +Y + E Sbjct: 224 KFAVQVYLEPGEASITLSTSLEVTVLDILNNGKELAIVDAATEAHMLDLLIYRS--EAKL 281 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + + + G C GD + GD + Y V+ +N Sbjct: 282 LPDAFKGKGEYEYMVCGKSCLAGDIFGEYHFEKPLKIGDRISFCDAAGYTMVKKNWFNGV 341 Query: 386 LLIPEIMVN-GSQFHIIRP 403 + ++ +++ Sbjct: 342 NMPAIVIKELDGSVRVVKE 360 >gi|322691946|ref|YP_004221516.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456802|dbj|BAJ67424.1| putative diaminopimelate decarboxylase [Bifidobacterium longum subsp. longum JCM 1217] Length = 518 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 23/246 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ G HIGS I ++F A K + L + ++ + + ID+GGG +AY Sbjct: 272 ELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDS 331 Query: 251 PSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA------ 297 D + ++ G I EPGR++VA G+ + +V +IK Sbjct: 332 MDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHVHLSDAKD 391 Query: 298 -------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ +V +D M+D +RP LY A + + N G + A + G CE+GD Sbjct: 392 SDGNPIAERVYVSVDGGMSDNIRPALYGADY-TARLANRTGSAETMLARVCGMHCESGDI 450 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + GD+L + TGAYG + YN L+ + V+ S H++ R T + Sbjct: 451 VVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPVVVAVSESGAHVMLRRQTVDD 510 Query: 410 LIELDS 415 L+ LD Sbjct: 511 LLNLDV 516 Score = 96.0 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 8/179 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVC 56 M+A EGS+ + E L +P Y T + F + AF+ T V Sbjct: 1 MNA----EGSIEFHGRTAESLLDEFGSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVS 56 Query: 57 YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 +A KA ++ V++ + G +D + GE++ ALAA VP R+V G K+ +EI LA++ Sbjct: 57 FAGKAFLSKEVVRLVTEAGMFVDTCTMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIE 116 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 G ++ E + + A LGK+A + RV ++A H+ IST ++ KFG+P+ Sbjct: 117 QGFAKIVIDEPDEPERVAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPL 175 >gi|256159037|ref|ZP_05456870.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M490/95/1] gi|256254391|ref|ZP_05459927.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti B1/94] gi|261221555|ref|ZP_05935836.1| carboxynorspermidine decarboxylase [Brucella ceti B1/94] gi|265997518|ref|ZP_06110075.1| carboxynorspermidine decarboxylase [Brucella ceti M490/95/1] gi|260920139|gb|EEX86792.1| carboxynorspermidine decarboxylase [Brucella ceti B1/94] gi|262551986|gb|EEZ07976.1| carboxynorspermidine decarboxylase [Brucella ceti M490/95/1] Length = 365 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 54/387 (13%), Positives = 114/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T +++N + + ALK + +V ++ S E Sbjct: 3 QTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDSTTSSSLNE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 63 VRLGHE-KFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERF------ADKASGIK 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP +++++ P L + + + + Sbjct: 116 RGLRLNPGVSSSSFD----------LADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L D+ ++ S H ++ + +GGG+ H + + + + Sbjct: 166 ENSDFSLFDRMLSDIEEKFGSLLHRVEWVSLGGGI----HFTGEDYPVDAFCARLKSFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KFGVQVYLEPGEASITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD GD L E Y V+ +N Sbjct: 276 KAKMAPNNGGHSYMVCGKSCLAGDIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V ++R + + Sbjct: 336 KMPA-IAVRELDGTVKLVRE-FDYADF 360 >gi|157164290|ref|YP_001467543.1| carboxynorspermidine decarboxylase [Campylobacter concisus 13826] gi|112801111|gb|EAT98455.1| carboxynorspermidine decarboxylase [Campylobacter concisus 13826] Length = 379 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 55/392 (14%), Positives = 115/392 (29%), Gaps = 31/392 (7%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++ ++TP Y + KN + + ALK + V+ + G Sbjct: 2 NEILKSIKTPAYVCEEAKVRKNLELLKYVKEQSGAKILVALKGFAFSGVMDMVGSYLDGA 61 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 E + A V E +S K D ++ S FN ++ + Sbjct: 62 TCSGLHEAKFASE-YVKGEIHTYSPAFKDEDFDEILKISKHITFNSFAQWQKFKGIALQN 120 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + V+ + + + ++ + S + Sbjct: 121 GIICGLRVNPEVSLAPTDSYNPCAKFSRLGITKANFKPELLDGITGLHFHALCEESASSL 180 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + +L ++ ++ I++GGG I Sbjct: 181 QV---------------VLEAFEEKFGEFIPKMKWINMGGGHHITRADYDVEL----LIK 221 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 +I ++ ++ LEPG + G L++ V+ I + ++ A L Sbjct: 222 IIRRFREKYGVEVYLEPGEAVGWQTGFLISSVLDIVHNEKDIAILDTSAEAHMPDTVL-- 279 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFI------ALNRKIALPRPGDLLYIEKTG 372 V G C GD + A + + + GD + E Sbjct: 280 --MPYRPAVRGESKNGKFAYRFGGNTCLAGDIVGLEAGDAEYKFDSELKIGDRVIFEDQI 337 Query: 373 AYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRP 403 Y V++ T+N L +++ + +IR Sbjct: 338 HYTIVKNTTFNGIKLPDLLLLKENGEIKMIRE 369 >gi|302335298|ref|YP_003800505.1| Orn/DAP/Arg decarboxylase 2 [Olsenella uli DSM 7084] gi|301319138|gb|ADK67625.1| Orn/DAP/Arg decarboxylase 2 [Olsenella uli DSM 7084] Length = 401 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 82/414 (19%), Positives = 148/414 (35%), Gaps = 46/414 (11%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +A TP Y + A+ G +CY++KAN + + A G Sbjct: 10 LLDIAREFGTPTYLFDLVALSARLAAVREIL-GPSVRLCYSIKANPFLS--RAAAECGYE 66 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 L++ S GEL + A IV+SGV K ++ AL G+ ES + + + Q A Sbjct: 67 LEVCSPGELDVCRGLGIEAPAIVYSGVCKGEADVRAALDYGVGVLTAESPRQFELVEQEA 126 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 G + P+ R+N +FG+ + + ++ G+ Sbjct: 127 RRRGLRVPVLLRLNGGS---------------QFGMSRGDLERIVRDREGYGAAELVGIH 171 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-IQHIDVGGGLGIAYHSDHRPPSSSDY 256 +G+Q +++ + ++L DL +L ++ G GL + Y + Sbjct: 172 YFVGTQRRKLQHQRRELQMLCDLADELERRCGWRPVRLEYGPGLAVPYFEGEDFSDTLAP 231 Query: 257 ASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI---LDVAMNDF 311 A + + + +E GRFL + G +T V+ +K D + Sbjct: 232 ARELAGDLQAVAGRFDLTVEMGRFLASSCGSYLTSVVDLKDGQDDETCYAFVDGGINHVN 291 Query: 312 MRPTLYDAYHEINYIVNPAG------DRLHIHADIVGPICETGDFIAL--NRKIALPRPG 363 + + + G R + G +C T D + +R +A P Sbjct: 292 YLGQMMGLKLPVIRNASVEGGSGGPLSRERRPWTLCGSLCTTNDVLVRQLDRPLA---PD 348 Query: 364 DLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSI 416 D+L E GAY +S + SR + +I R ++ D + Sbjct: 349 DVLVFENIGAYSVTESMYLFLSRAMP----------RVILRRGRGDYVLARDVV 392 >gi|332202776|gb|EGJ16845.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae GA41317] Length = 375 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 78/390 (20%), Positives = 128/390 (32%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y +E N + V A KA S ++ SG Sbjct: 4 EQVPTPAYVIDLAKLEANCCILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L + FN E + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKDADLEELLEITDHIVFNS----ERQLRKHGPRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ I +I S L V Sbjct: 119 GVSVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDL-----LDLVDGFHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + +Q H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------EQFGPYLHEVKWLNMGGGHHITREGYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +I +EPG + + G L T+V+ I ++LD + M L Y Sbjct: 224 RIRKTYNLEIYIEPGEAIALNAGYLATEVLDIV-ENGMEILVLDASATCHMPDVLEMPYR 282 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A ++ H + C TGD I + GD LY + Y V++ T Sbjct: 283 PPLRNGFEAQEKAH-TYRLSSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNT 341 Query: 382 YNSRLLIPEIMVNG-SQFHIIRPRMTFQEL 410 +N L +++ ++ +Q+ Sbjct: 342 FNGIGLPSLYLMDEQGDCSLL-KAFGYQDF 370 >gi|225352614|ref|ZP_03743637.1| hypothetical protein BIFPSEUDO_04240 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156808|gb|EEG70202.1| hypothetical protein BIFPSEUDO_04240 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 529 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 24/256 (9%) Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLG 241 +++ GV HIGS I ++F +A K + L + ++ + + +D+GGG Sbjct: 273 EIYRHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYS 332 Query: 242 IAYHSDHRPPSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 +AY D + +++ G I EPGR+ VA G+ + +V Sbjct: 333 VAYTDGEDSMDLDTELARLADAVTTVNRALGMPAPVISFEPGRWTVAPTGVTLYRVGTVK 392 Query: 291 ----------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI 340 + ++ +V +D M+D +RP LY + + I N G + Sbjct: 393 PVQLAGTAKDKAGNPVTERVYVSVDGGMSDNIRPALYGSDY-TARIANREGSSETKLCRV 451 Query: 341 VGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 VG CE+GD I ++ + GD+L + TGAYG + YN L+ + V+ H Sbjct: 452 VGMHCESGDIIVNEVRLPADIQRGDVLAVPVTGAYGRTMASNYNQALIPAVVAVSEQDAH 511 Query: 400 IIRPRMTFQELIELDS 415 ++ R T +L++ D Sbjct: 512 VMIRRQTVDDLLDWDV 527 Score = 96.0 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 4/173 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKAN 62 +G + + E L + +P Y T + F +NAF+ T V +A KA Sbjct: 18 EQGEITFHGRTAESLLNEFGSPLYVIDTDDVRARAAKFVKSAANAFNNTVTHVSFAGKAL 77 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 ++ + + + G +D + GE+R ALAA VP R+V G K+ EI+LA+ G Sbjct: 78 LSKEICRIVTESGMLIDTCTMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAITEGFAKI 137 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 V+ +E + + A LGK+A + RV I+A H+ +ST ++ KFG+ + Sbjct: 138 VVDEPNEPARIAEIAKRLGKRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 190 >gi|282858847|ref|ZP_06267992.1| carboxynorspermidine decarboxylase [Prevotella bivia JCVIHMP010] gi|282588416|gb|EFB93576.1| carboxynorspermidine decarboxylase [Prevotella bivia JCVIHMP010] Length = 388 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 115/386 (29%), Gaps = 21/386 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + KN +N + + A KA + S S E Sbjct: 14 PVYVLEEDRLRKNLSLIANVAKKANVEIILAFKAYALWKTFPIFKEYISATTASSLSEAH 73 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 T E + + S ++ + +A K + Sbjct: 74 LGYEEFGTP--CHTFSPAYTDYEFEEIAKY-SSHLTFNSLTQYDRYHLKARQYNKALSLG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNP+ + + +FGI L + + G + Sbjct: 131 LRVNPEYSEVGTLLYNPCSPGTRFGI-------LAEKLPEILPEDVDGFHV----HCHCE 179 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + ++ ++ I+ GGG + H + Sbjct: 180 SGSDVFERTLVHIEEKFAKWFPQLKWINFGGGHLMTRADYDIDKLIQIL---QHFHSRYP 236 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 K+ILEPG G LV++V+ I + IL+V+ M L YH Sbjct: 237 WLKVILEPGSAFGWQTGSLVSQVVDIVEYRGYRTAILNVSFTAHMPDCLEMPYHPTVRGA 296 Query: 328 NPAGDR----LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + G C +GD++ R + G+ + E Y V++ T+N Sbjct: 297 ETLENGGETTEPTTYRLGGNSCLSGDWMGNWRFDHKLQIGENIIFEDMLHYTTVKTNTFN 356 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 +++ + + ++++ Sbjct: 357 GISHPAIALLHSNNELEMLREYSYED 382 >gi|134301242|ref|YP_001121210.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis WY96-3418] gi|134049019|gb|ABO46090.1| pyridoxal-depedent decarboxylase [Francisella tularensis subsp. tularensis WY96-3418] Length = 417 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 78/407 (19%), Positives = 147/407 (36%), Gaps = 28/407 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 +E + +P + + + F A +++ Y++K S +I+ +G Sbjct: 19 IETIIQRYASPCFIIDENTLLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVG 78 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS E + + + I+F+G K ALQ N + E+ + + Sbjct: 79 FIPEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASFIKALQLNAM-INCDHFDEILRIAK 137 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L A I RV + T + S I + + ++++G Sbjct: 138 IAKKLNITAKIGLRV---ADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAG 194 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIG+ I I F K + +L + + + GG Sbjct: 195 LHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQP 254 Query: 256 YASLIHQYF--------------GNLQCKIILEPGRFLV-ADVGILVTKVISIKKSADKT 300 Y + + N + K+I E GR LV V +L T V + +++ D Sbjct: 255 YNPFDLELYAATIIAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQ 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +I D ++ + Y D H ++GP C DF+ + + Sbjct: 315 SLITDAGIHTIPTISTYRHPIYHL-----KTDSYHKKTLLLGPSCMQHDFLHDDIFLPKL 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMT 406 GD L I+ GAY ++ + L I+++ + Q+ ++R R T Sbjct: 370 EYGDKLLIDGVGAYNISRNNEFI-HLKPSVILIDKNHQYQVLRVRQT 415 >gi|213420478|ref|ZP_03353544.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 275 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 3/243 (1%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLG 241 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 242 IAY 244 + Y Sbjct: 262 VPY 264 >gi|332880291|ref|ZP_08447969.1| carboxynorspermidine decarboxylase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681736|gb|EGJ54655.1| carboxynorspermidine decarboxylase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 396 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 59/392 (15%), Positives = 110/392 (28%), Gaps = 19/392 (4%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 V TP Y + +N + + A KA + S S Sbjct: 11 VPTPCYIIEEDLLRRNLELIRDVSRRAGVEIILAFKAFALWKSFPVFREYISHTTASSLY 70 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E A + AE + + + C + + + + + + + Sbjct: 71 E------ARLAAEEFGSKAHTYSPAYTERDFDRILSCSSHVTFNSMSQYVRFYPRVEEYN 124 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 ++ + E P AS LP +G++ Sbjct: 125 R--LYPEERVSCGLRINPEYSEIEVDLYNPCAPGSRFGMMASQLPDCLPAGIEGF-HCHC 181 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 S L+ + ++ ++ +++GGG + A L Sbjct: 182 HCESSSEALEHTLQHIEEKFGRWLSRLKWLNLGGGHLMTRKDYD---VERLVAILKGLKE 238 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +ILEPG G LV V+ + ++ ILDV+ M L Y Sbjct: 239 RYPDLTVILEPGSAFAWQTGPLVASVVDVVENKGIRTAILDVSFTCHMPDCLEMPYQPAV 298 Query: 325 YIVNPAGD-------RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + G C +GD++ R PGD + E Y V Sbjct: 299 RNAETVEPDAVKRATPEENVYRLGGNSCLSGDYMGAWRFGHPLAPGDRIIFEDMIHYTTV 358 Query: 378 QSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 ++ +N M++ R ++ + Sbjct: 359 KTNMFNGIRHPDIAMLHSDGTLEYYRRFSYTD 390 >gi|291457070|ref|ZP_06596460.1| diaminopimelate decarboxylase [Bifidobacterium breve DSM 20213] gi|291380905|gb|EFE88423.1| diaminopimelate decarboxylase [Bifidobacterium breve DSM 20213] Length = 542 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 23/246 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ G HIGS I ++F A K + L + ++ + + ID+GGG +AY Sbjct: 297 ELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDS 356 Query: 251 PSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK-------- 295 S ++ G I EPGR++VA G+ + +V +IK Sbjct: 357 MDIDVELTRLAGSVSDTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHVHLSDAKD 416 Query: 296 -----SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ +V +D M+D +RP LY A + + N G + A + G CE+GD Sbjct: 417 SAGNPIGERVYVSVDGGMSDNIRPALYGADY-TARLANRTGSTETMLARVCGMHCESGDI 475 Query: 351 IALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + GD+L + TGAYG + YN L+ + V+ H++ R T + Sbjct: 476 VVHEVRLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSEQGAHVMLRRQTIDD 535 Query: 410 LIELDS 415 L++LD Sbjct: 536 LLDLDQ 541 Score = 97.2 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 G++ + E L +P Y T + F + AF+ T V +A KA Sbjct: 18 NGAIAFHGRTAESLLDEFGSPLYLIDTDEVSARAKHFVRAAAEAFNTSTTHVSFAGKAFL 77 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ +++ +A G +D + GE+R ALAA VP R+V G K+ DEI LA++ G Sbjct: 78 SKEIVRLVAEAGMFVDTCTMGEMRIALAAGVPGRRLVLHGNNKSDDEIALAIEQGFAKIV 137 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 V+ +E + + A LGK+A + RV ++A H+ IST ++ KFG+P+ Sbjct: 138 VDEPNEPERIAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPL 189 >gi|229591022|ref|YP_002873141.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens SBW25] gi|229362888|emb|CAY49798.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens SBW25] Length = 365 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 50/387 (12%), Positives = 111/387 (28%), Gaps = 29/387 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + N + + ALK + +V + G S EL Sbjct: 4 TPYYLIDKQKLLVNMQKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + ++ S S+L+ +R+ + + Sbjct: 64 KLGRQ-KFEGEAHAYSVAWADDEIEEMLD--NCDKIIFNSISQLQRFAERSEGKTRGLRV 120 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 +V+ + P L + I + + + Sbjct: 121 NPQVSS--------------SDYLLADPARPFSRLGEWDPVKIEGVIEQISGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F +L + ++ + H ++ + +GGG+ H + + + + + Sbjct: 167 NGDFSLFDNMLGTIEERFGALLHKVEWVSLGGGI----HFTGEDYAVDAFCARLKAFSEK 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + + L V+ + V+ + +Y Sbjct: 223 YGVQVYLEPGEAAITNSASLEVTVLDTLYNGKNLAVVDSSIEAHLLDLLIY------RLN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A + G C GD + GD L T Y V+ +N Sbjct: 277 AKLAPSDGEHTVMVCGKSCLAGDIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLK 336 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQELIE 412 + ++ ++R + + + Sbjct: 337 MPSIVVKQLDGTVEVVRE-FGYDDYLS 362 >gi|282881312|ref|ZP_06289992.1| carboxynorspermidine decarboxylase [Prevotella timonensis CRIS 5C-B1] gi|281304788|gb|EFA96868.1| carboxynorspermidine decarboxylase [Prevotella timonensis CRIS 5C-B1] Length = 441 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 112/388 (28%), Gaps = 23/388 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + +N + D + A KA + S E Sbjct: 65 PIYILEEEKLRRNLQLIRHVATTADVEIILAFKAYALWKTFPIFREYIHATTASSLNEAL 124 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A +S + ++ S FN S+ E + A + + Sbjct: 125 LGFHAFGEP-THTYSPAYTDDEMEEIVRCSSHVTFNSLSQYE--RYHVLARQVQPNVQLG 181 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NP+ + + +FG+ Q+ + Sbjct: 182 LRINPEYSEVGTDLYNPCAPGTRFGVTADQLPPS-----------LPNDLTGFHCHCHCE 230 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + ++ + I+ GGG + A L + + Sbjct: 231 SGADVFQRTLAHIEEKFSHWFDELSWINFGGGHLMTRQDYDVDLL---IALLQNFKQRHP 287 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 ++ILEPG G+LV +V+ + ++ I++V+ M L Y Sbjct: 288 HLQVILEPGSAFAWQTGVLVAQVVDVVENHGIRTAIVNVSFTCHMPDCLEMPYQPTIRNA 347 Query: 328 ------NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + I G C +GDF+ + + G+ L E Y V++ Sbjct: 348 TTLAPKSQNHTEKKHVYRIGGNSCLSGDFMGDWQFDHELKVGENLIFEDMLHYTTVKTNM 407 Query: 382 YNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 +N ++ + T+ + Sbjct: 408 FNGIAHPAIALLKTDGTLQMLREYTYDD 435 >gi|198432637|ref|XP_002122254.1| PREDICTED: similar to ornithine decarboxylase 1 [Ciona intestinalis] Length = 413 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 73/376 (19%), Positives = 126/376 (33%), Gaps = 34/376 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + + + YA+K VI+ LA LG+G D S+ E+ Sbjct: 50 FYIGDLNRVFLRHQQWKEVLPR--VELFYAIKCCPLMPVIRLLAALGTGFDCASQNEIES 107 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 ++ V +I+++ K ++ A + ++E EL + + A + Sbjct: 108 VISIGVDPAKIIYALPCKPASQLQHARTRKVSLMTFDNEDELHKIQKYFPD----ARLVL 163 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+ PD T K KFG + + L +A L + + G+ +G Sbjct: 164 RLLPDETGATFKM------GSKFGCTLEEGKKLLVHAKKLD-LNVIGLSFFVGDDCKSSI 216 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 + R + S G N+ ID+GGG ++ + Sbjct: 217 GMRLNLENSRKMFDFASSIGINMDLIDIGGGFPGNDKDQKLFLQIANDTRDTLDKLFPSE 276 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +II EPGR+ V + T ++ K+S I+ N Sbjct: 277 CGVRIIAEPGRYFVESSFSIATSIVGKKQSEGIWCRIV------------------FNAE 318 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 D+ I G C+ D IA N + D L + GAY + +N + Sbjct: 319 TKRFSDKAVHDTIIYGTTCDGTDIIAQNVALPELDLEDWLIWDDMGAYTVLCKFGFNGVM 378 Query: 387 LIPE-IMVNGSQFHII 401 V + I Sbjct: 379 TTKAFYFVQEGAWKTI 394 >gi|322497353|emb|CBZ32428.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 707 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 72/430 (16%), Positives = 136/430 (31%), Gaps = 85/430 (19%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + + + +A+K+N AV++ L+ LG+G D S+ E+ Sbjct: 258 PFYIIDLGRVVEQMARWRHELPM--VRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315 Query: 88 RA--LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + I+F+ K + ++ A G+ V++ E++ +++ S Sbjct: 316 MVLGHQLVASPDDIIFANPCKQLGDLREAQACGVTYVTVDNPLEMEKISRLMPSAHAIIR 375 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I T+ + KFG P+ + L A + GV H+GS D Sbjct: 376 I----------KTNDSKAQCSFSTKFGAPLEDVEGLLEAARQFNVT-VCGVSFHVGSGND 424 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY-----HSDHRPPSSSDYASLI 260 ++ A + + QQ G +D+GGG + + ++ Sbjct: 425 DQSAYVSAVRDAYQVFQQAVQYGFKCTILDIGGGFPGTEVVEGSGNTSFEAIARTIRPVL 484 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVIS--------------------IKKSADKT 300 + FG II EPGR+ A L+ V + ++ Sbjct: 485 AELFGGGDVTIISEPGRYFTAASHALLMNVFASRTLRLSDVEVSRQAFQSVVSMDEPEEY 544 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAG---------------DRLHIHADIVGP-- 343 ++ + L+D H ++N + GP Sbjct: 545 QYYVNDGLYHSFNCILFDHAHPTLLLLNDGDGADGVESGTEAAAVCSEEEGETSLSGPLA 604 Query: 344 ----------------------------ICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 C++ D I + + GD L + G+Y Sbjct: 605 NDPLFMSAWDRRRSFARRPLRITTIFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYT 664 Query: 376 AVQSGTYNSR 385 +G +N Sbjct: 665 TAAAGFFNGF 674 >gi|294673620|ref|YP_003574236.1| carboxynorspermidine decarboxylase [Prevotella ruminicola 23] gi|294474225|gb|ADE83614.1| carboxynorspermidine decarboxylase [Prevotella ruminicola 23] Length = 373 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 73/380 (19%), Positives = 121/380 (31%), Gaps = 25/380 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP Y T + +N + D V A KA + + S E Sbjct: 3 TPIYIIEETKLRRNLSLIAEVAAKADIEVILAFKAFALWKTFPIFREYINSTTASSLSEA 62 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R A +S + ++ S FN S+ E K A + Sbjct: 63 RLAFEEFKAPAHT-YSPAYTEEEFPEIVKCSSHITFNSLSQYERF------HEQAKSASL 115 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 RVNP+ + + + +FGI A LP + ++ + + Sbjct: 116 GLRVNPEYSEVSTLLYNPCAPGTRFGIT----------ADKLPEQLPADIEGFHCHTLCE 165 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + L + ++ ++ I+ GGG + +Y Sbjct: 166 SGPDVF-QRTLVHIEEKFAKWFPQLKWINFGGGHLMTRKDYDVELLIKIIHDFKKRYPWL 224 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY- 325 KIILEPG G LV+ V+ I + ILDV+ M L Y Sbjct: 225 ---KIILEPGSAFAWQTGPLVSHVVDIVEDKGIKTAILDVSFTCHMPDCLEMPYMPEVRG 281 Query: 326 --IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 IV + + G C +GDF+ + G+ + E Y V++ T+N Sbjct: 282 AEIVEMEKATEPMTYRLGGNSCLSGDFMGSWLFDHELKVGEEIIFEDMIHYTTVKTCTFN 341 Query: 384 SRLLIPEIMVN-GSQFHIIR 402 M++ + I+R Sbjct: 342 GISHPAIGMLHANGKLEILR 361 >gi|53133950|emb|CAG32289.1| hypothetical protein RCJMB04_22c14 [Gallus gallus] Length = 407 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 71/378 (18%), Positives = 122/378 (32%), Gaps = 32/378 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + K + + N Y ++ NS V++ L LG G S+ E+ Sbjct: 40 FYVGDLGKLVKKNIQWQNVMA--PIKPFYTVRCNSTPGVLEILGTLGIGFACSSKSEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + E I+++ K +I A ++GI +S+ ELK + + + IA Sbjct: 98 VQGLGISPENIIYTNPCKQASQIKYAAKAGINIMTCDSDIELKKIARNHPNAKLLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A +I GV H+ +++ Sbjct: 157 ---------TEDITADEEMNMKFGTTLKNCRHLMECAKEFGV-QIVGVKFHVSGSCKELQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A R + G + +D+GGG + L + Sbjct: 207 TYIHAISDARCVFDMAEEFGFKMNMLDIGGGFTGSELQLEEVNHVIR-PLLDVYFPKESG 265 Query: 269 CKIILEPGRFLVADVGILVTKVIS------------------IKKSADKTFVILDVAMND 310 ++I EPG + V+ L VI+ T+ I D Sbjct: 266 IQVIAEPGCYYVSSAFTLAVNVIAKKAVDCDKLLPSGVEQARNDDEQVFTYYINDGVYGS 325 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 F Y D + + GP C+ D I N + GD L + Sbjct: 326 FASKLSEKLYTNPEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELSVGDWLIFDN 385 Query: 371 TGAYGAVQSGTYNSRLLI 388 G+ + T+N Sbjct: 386 MGSGTLGEQSTFNDYQRP 403 >gi|187930984|ref|YP_001890968.1| diaminopimelate decarboxylase [Francisella tularensis subsp. mediasiatica FSC147] gi|187711893|gb|ACD30190.1| diaminopimelate decarboxylase [Francisella tularensis subsp. mediasiatica FSC147] Length = 417 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 79/407 (19%), Positives = 149/407 (36%), Gaps = 28/407 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 +E + +P + A+ + F A +++ Y++K S +I+ +G Sbjct: 19 IETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVG 78 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS E + + + I+F+G K + ALQ N + E+ + + Sbjct: 79 FIPEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAM-INCDHFDEILRIAK 137 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L A I RV + T + S I + + ++++G Sbjct: 138 IAKKLNITAKIGLRV---ADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAG 194 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIG+ I I F K + +L + + + GG Sbjct: 195 LHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQP 254 Query: 256 YASLIHQYF--------------GNLQCKIILEPGRFLV-ADVGILVTKVISIKKSADKT 300 Y + + N + K+I E GR LV V +L T V + +++ D Sbjct: 255 YNPFDLELYAATIIAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQ 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +I D ++ + Y D H ++GP C DF+ + + Sbjct: 315 SLITDAGIHTIPTISTYRHPIYHL-----KTDSYHKKTLLLGPSCMQHDFLHDDIFLPKL 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMT 406 GD L I+ GAY ++ + L I+++ + Q+ ++R R T Sbjct: 370 EYGDKLLIDGVGAYNISRNNEFI-HLKPSVILIDKNHQYQVLRVRQT 415 >gi|62261067|gb|AAX77957.1| unknown protein [synthetic construct] Length = 452 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 79/407 (19%), Positives = 149/407 (36%), Gaps = 28/407 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 +E + +P + A+ + F A +++ Y++K S +I+ +G Sbjct: 45 IETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVG 104 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS E + + + I+F+G K + ALQ N + E+ + + Sbjct: 105 FIPEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAM-INCDHFDEILRIAK 163 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L A I RV + T + S I + + ++++G Sbjct: 164 IAKKLNITAKIGLRV---ADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAG 220 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIG+ I I F K + +L + + + GG Sbjct: 221 LHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQP 280 Query: 256 YASLIHQYF--------------GNLQCKIILEPGRFLV-ADVGILVTKVISIKKSADKT 300 Y + + N + K+I E GR LV V +L T V + +++ D Sbjct: 281 YNPFDLELYAATIIAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQ 340 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +I D ++ + Y D H ++GP C DF+ + + Sbjct: 341 SLITDAGIHTIPTISTYRHPIYHL-----KTDSYHKKTLLLGPSCMQHDFLHDDIFLPKL 395 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMT 406 GD L I+ GAY ++ + L I+++ + Q+ ++R R T Sbjct: 396 EYGDKLLIDGVGAYNISRNNEFI-HLKPSVILIDKNHQYQVLRVRQT 441 >gi|54113955|gb|AAV29611.1| NT02FT1732 [synthetic construct] Length = 417 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 79/407 (19%), Positives = 149/407 (36%), Gaps = 28/407 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 +E + +P + A+ + F A +++ Y++K S +I+ +G Sbjct: 19 IETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVG 78 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS E + + + I+F+G K + ALQ N + E+ + + Sbjct: 79 FIPEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAM-INCDHFDEILRIAK 137 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L A I RV + T + S I + + ++++G Sbjct: 138 IAKKLNITAKIGLRV---ADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAG 194 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIG+ I I F K + +L + + + GG Sbjct: 195 LHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQP 254 Query: 256 YASLIHQYF--------------GNLQCKIILEPGRFLV-ADVGILVTKVISIKKSADKT 300 Y + + N + K+I E GR LV V +L T V + +++ D Sbjct: 255 YNPFDLELYAATIIAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQ 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +I D ++ + Y D H ++GP C DF+ + + Sbjct: 315 SLITDAGIHTIPTISTYRHPIYHL-----KTDSYHKKTLLLGPSCMQHDFLHDDIFLPKL 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMT 406 GD L I+ GAY ++ + L I+++ + Q+ ++R R T Sbjct: 370 EYGDKLLIDGVGAYNISRNNEFI-HLKPSVILIDKNHQYQVLRVRQT 415 >gi|89257094|ref|YP_514456.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica LVS] gi|115315451|ref|YP_764174.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica OSU18] gi|156503308|ref|YP_001429373.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009486|ref|ZP_02274417.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FSC200] gi|254368329|ref|ZP_04984347.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica 257] gi|254368961|ref|ZP_04984974.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FSC022] gi|290952985|ref|ZP_06557606.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica URFT1] gi|295313805|ref|ZP_06804378.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica URFT1] gi|89144925|emb|CAJ80273.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica LVS] gi|115130350|gb|ABI83537.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica OSU18] gi|134254137|gb|EBA53231.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica 257] gi|156253911|gb|ABU62417.1| pyridoxal-depedent decarboxylase [Francisella tularensis subsp. holarctica FTNF002-00] gi|157121882|gb|EDO66052.1| diaminopimelate decarboxylase [Francisella tularensis subsp. holarctica FSC022] Length = 417 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 79/407 (19%), Positives = 149/407 (36%), Gaps = 28/407 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 +E + +P + A+ + F A +++ Y++K S +I+ +G Sbjct: 19 IETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVG 78 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS E + + + I+F+G K + ALQ N + E+ + + Sbjct: 79 FIPEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAM-INCDHFDEILRIAK 137 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L A I RV + T + S I + + ++++G Sbjct: 138 IAKKLNITAKIGLRV---ADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAG 194 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIG+ I I F K + +L + + + GG Sbjct: 195 LHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQP 254 Query: 256 YASLIHQYF--------------GNLQCKIILEPGRFLV-ADVGILVTKVISIKKSADKT 300 Y + + N + K+I E GR LV V +L T V + +++ D Sbjct: 255 YNPFDLELYAATIIVPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQ 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +I D ++ + Y D H ++GP C DF+ + + Sbjct: 315 SLITDAGIHTIPTISTYRHPIYHL-----KTDSYHKKTLLLGPSCMQHDFLHDDIFLPKL 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMT 406 GD L I+ GAY ++ + L I+++ + Q+ ++R R T Sbjct: 370 EYGDKLLIDGVGAYNISRNNEFI-HLKPSVILIDKNHQYQVLRVRQT 415 >gi|56707207|ref|YP_169103.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis SCHU S4] gi|110669677|ref|YP_666234.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis FSC198] gi|224456268|ref|ZP_03664741.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] gi|254371423|ref|ZP_04987424.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis FSC033] gi|254874045|ref|ZP_05246755.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] gi|56603699|emb|CAG44660.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320010|emb|CAL08043.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis FSC198] gi|151569662|gb|EDN35316.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis FSC033] gi|254840044|gb|EET18480.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158315|gb|ADA77706.1| diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis NE061598] Length = 417 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 79/407 (19%), Positives = 149/407 (36%), Gaps = 28/407 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 +E + +P + A+ + F A +++ Y++K S +I+ +G Sbjct: 19 IETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVG 78 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS E + + + I+F+G K + ALQ N + E+ + + Sbjct: 79 FIPEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAM-INCDHFDEILRIAK 137 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L A I RV + T + S I + + ++++G Sbjct: 138 IAKKLNITAKIGLRV---ADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAG 194 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIG+ I I F K + +L + + + GG Sbjct: 195 LHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQP 254 Query: 256 YASLIHQYF--------------GNLQCKIILEPGRFLV-ADVGILVTKVISIKKSADKT 300 Y + + N + K+I E GR LV V +L T V + +++ D Sbjct: 255 YNPFDLELYAATIIAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQ 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +I D ++ + Y D H ++GP C DF+ + + Sbjct: 315 SLITDAGIHTIPTISTYRHPIYHL-----KTDSYHKKTLLLGPSCMQHDFLHDDIFLPKL 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMT 406 GD L I+ GAY ++ + L I+++ + Q+ ++R R T Sbjct: 370 EYGDKLLIDGVGAYNISRNNEFI-HLKPSVILIDKNHQYQVLRVRQT 415 >gi|255994175|ref|ZP_05427310.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein [Eubacterium saphenum ATCC 49989] gi|255993843|gb|EEU03932.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein [Eubacterium saphenum ATCC 49989] Length = 396 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 86/404 (21%), Positives = 160/404 (39%), Gaps = 30/404 (7%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 V + K+ + V +P Y +S +F G D +C+++KAN ++ + Sbjct: 3 VDINKICNEVISPSYIFSEEEFASRAALVRESF-GEDVNLCFSIKANP--FLLGIMPDQI 59 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 S +++ S GEL +P E I+FSGV K+ +EI +AL+ G+ ES+ + +N Sbjct: 60 SKVEVCSPGELDVCKRLKLPPEMIIFSGVNKSKEEIRVALEYGVRNITAESKKHVDYINS 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A + + R++ E +FGI ++ G KI+G Sbjct: 120 VATDMNITCDLLLRLSD---------------ESQFGIDGDELLGYIKNRDEYKGFKIAG 164 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + G+Q + + K ++ ++ NI+ I+ G GL + Y S + Sbjct: 165 LHYFTGTQKRRPSAIMKEIDKFMAYIDRVEADANFNIERIEYGTGLAVDYFSKDALNEET 224 Query: 255 DYASL--IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 + + + +E GRF A G VT+V+ K + + I+D ++ Sbjct: 225 ARIKEIAPKIKELSKKADLTVEMGRFFSAPCGYYVTEVMDTKVNDGVHYAIVDGGIHQLK 284 Query: 313 RPTLYD-AYHEINYIVNPAGDRLHI-----HADIVGPICETGDFIALNRKIALPRPGDLL 366 + + + + G +C T D IA + + DLL Sbjct: 285 YDGQTQGMQIPEITHIKNSQSCDEVGSGTNKWTLCGSLCTTADVIARSVEFTDLNCKDLL 344 Query: 367 YIEKTGAYGAVQS-GTYNSRLLIPEIMVNG-SQFHIIRPR-MTF 407 +TGAY + SR + +++ +Q + +R R T+ Sbjct: 345 VFHRTGAYSMDEGISLLLSRDMPSIYILDKANQLNKVRSRVDTY 388 >gi|282878501|ref|ZP_06287284.1| carboxynorspermidine decarboxylase [Prevotella buccalis ATCC 35310] gi|281299389|gb|EFA91775.1| carboxynorspermidine decarboxylase [Prevotella buccalis ATCC 35310] Length = 398 Score = 119 bits (299), Expect = 7e-25, Method: Composition-based stats. Identities = 62/392 (15%), Positives = 119/392 (30%), Gaps = 24/392 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y T + +N S+ + D + A KA + S E Sbjct: 23 PIYILEETKLRRNLQLISSVAERADVEIILAFKAYALWKTFPVFREYIHSTTASSLNEAL 82 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 +S + + ++A S FN S+ E Q + + Sbjct: 83 LGFHIFSAP-THTYSPAYEEDEIEEIARLSSHLTFNSLSQLE--RFGQTVKCVNPSVNVG 139 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NP+ + + +FG+ +++ ++ V Sbjct: 140 LRINPEYSEVGTDLYNPCAPGTRFGVTANKLPC-----------ELPSVVTGFHCHCHCE 188 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + ++ I+ I+ GGG + +Y Sbjct: 189 SGADVFQRTLAHIEEKFSPWFSQIKWINFGGGHLMTRKDYDINLLVQTLLDFKKKYPHL- 247 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 K+ILEPG G LV +V+ + + IL+V+ M L Y Sbjct: 248 --KVILEPGSAFAWQTGPLVAQVVDVVEDHSIRTAILNVSFTCHMPDCLEMPYVPTVRFA 305 Query: 328 NPAGDRLHIH-----ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + H+ + G C +GDF+ + G+ + E Y V++ + Sbjct: 306 DIVEEENHLPTKEHIYRLGGNSCLSGDFMGSWHFNHELQIGENIIFEDMMHYTTVKTNMF 365 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMTFQELIEL 413 N + + ++R TF + Sbjct: 366 NGVGHPAIGFLRQDGELEMLRK-YTFDDYAAR 396 >gi|300787405|ref|YP_003767696.1| ornithine decarboxylase [Amycolatopsis mediterranei U32] gi|299796919|gb|ADJ47294.1| ornithine decarboxylase [Amycolatopsis mediterranei U32] Length = 536 Score = 119 bits (299), Expect = 7e-25, Method: Composition-based stats. Identities = 78/415 (18%), Positives = 141/415 (33%), Gaps = 33/415 (7%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 Y T IE+ Y + D V +A+KA + AV+ LA +G+G D S GE+ L Sbjct: 14 VYDLTGIERQYHALLDELP--DVSVRFAVKACPHPAVLACLARVGAGFDAASPGEIELTL 71 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 + + + K+ +I A GI F + +++ + + A + Sbjct: 72 RNGALPDDVHYGNTVKSDADIAAAHSLGITTFATDCVQDVRAIARHAPGAHVFCRVT--- 128 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 T + + +P +G+ +H+GSQ ++ Sbjct: 129 ------TTGDGALWPLTGKCGSDDAVGVLTEARRLGLVP----AGLSIHVGSQQMTASAW 178 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH---------SDHRPPSSSDYASLIH 261 +A L L L + G + H+++GGGL + ++ + Sbjct: 179 RQALDTLVALVTSLAAQGIQLGHVNLGGGLPAHGYLSKDGVPLVPPTGEIFTAIREGMGR 238 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + + ++EPGR LVAD G + V + + + N Sbjct: 239 LREAGGRLRFLVEPGRHLVADHGTIRAHVARLTSRGRRWLYLSCGKFNG----LYETDQV 294 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIALPRPGDLLYIEKTGAYGAVQS 379 + A + GP C++ D A GD ++I TGAY + Sbjct: 295 RYRLTFPGQAGGAEVPAMVAGPTCDSDDSFGGGPVVVPADLASGDPVWIHSTGAYAIGYT 354 Query: 380 GT-YNSRLLIPEIMVNGSQFHIIRPRM--TFQELIELDSIPAWLQKTPKQSSENY 431 +N +P + V + I T EL + P L ++ + Sbjct: 355 TVGFNGFRPLPVLAVRTEKIRPIDAGDWTTIAELEAAEYAPRGLSESRAVLESRW 409 >gi|320329052|gb|EFW85051.1| ornithine decarboxylase, putative [Pseudomonas syringae pv. glycinea str. race 4] gi|330885445|gb|EGH19594.1| ornithine decarboxylase [Pseudomonas syringae pv. glycinea str. race 4] Length = 371 Score = 119 bits (299), Expect = 7e-25, Method: Composition-based stats. Identities = 80/373 (21%), Positives = 134/373 (35%), Gaps = 21/373 (5%) Query: 18 LEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +LA T FY I +N FS F G V YA+KAN + V++ L+ G Sbjct: 5 LAQLADDTNDT-FYTVDPRWITRNAQQFSGCFPG---TVLYAMKANPLEQVLEALSQGGI 60 Query: 77 -GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 D+ S E++ A + + + V + + G+ F ++SE EL L Sbjct: 61 NHFDVASLAEVQTVHNTLPTAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRD 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R A + + P+ ++ AS+ G Sbjct: 121 VLPERDSTISLFVRY-----APSESTAVYDLRGKFGASPVLATQLVHQVASSTDWS--LG 173 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-- 253 + H+GSQ + + A D +R +++H+D+GGG Y + Sbjct: 174 LSFHVGSQAIEDGPWLAALN---DADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLV 230 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 I +I E GR LV L +V+S ++ + + + + Sbjct: 231 GRVCDHIQTSPTLKDLNLICEAGRGLVYGGMSLFARVLSRREQSVFCGAGIFGGLLSAQQ 290 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 + A + P +IVGP C++ D +A +A R D L + TG Sbjct: 291 WLQFPA--RVWRDGTPYTGAAENTFNIVGPTCDSMDRLAFPYSLASDIRESDWLEFQSTG 348 Query: 373 AYGAVQSGTYNSR 385 AY +N Sbjct: 349 AYSVSLRTPFNGF 361 >gi|294055999|ref|YP_003549657.1| carboxynorspermidine decarboxylase [Coraliomargarita akajimensis DSM 45221] gi|293615332|gb|ADE55487.1| carboxynorspermidine decarboxylase [Coraliomargarita akajimensis DSM 45221] Length = 404 Score = 119 bits (299), Expect = 7e-25, Method: Composition-based stats. Identities = 66/397 (16%), Positives = 121/397 (30%), Gaps = 15/397 (3%) Query: 17 SLEKLA----HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 L++LA +P Y + +N + V ALK + + ++ Sbjct: 13 RLQQLASIPTDDCPSPAYIVQLDRLNENCELLEQVAETSGAKVLLALKGFACHSTFPVIS 72 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 +G E A E V+S K + V + ++ Sbjct: 73 KYLAGTTSSGLHEALLATEHFGK-EVHVYSPAYKASELQA---LRHFAHSLVFNSADQLA 128 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 R ++ G + + RVNP+ + + G + S + Sbjct: 129 SGVRQLTDGPRPQLGLRVNPEYSEVETDLYDPCSPNSRLGTTRSALDSALQRLPSGLLHH 188 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + G+ H + D H A L + ++ ++ GGG I Sbjct: 189 LDGLHFHALCEQDADTLEHTAEAFESKFGDLLETLP--LKWLNFGGGHHITRPG----YD 242 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 + ++ + + + LEPG + GILV V+ I ++ K +I D + M Sbjct: 243 LARLCKVVQYFREKYEVDVYLEPGEAVALHTGILVVTVLDILEAGGKQLIITDSSATCHM 302 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 L Y D I G C GD + G L Sbjct: 303 PDVLEMPYRPNILDAG-EADEFPYTYRIGGMSCLAGDVVGDYSFQQPVEIGQRLVFLDMS 361 Query: 373 AYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 Y V++ T+N L + + + I + + + Sbjct: 362 HYTMVKTTTFNGVPLPAICLHSEADGLQIVRKFHYSD 398 >gi|126728979|ref|ZP_01744794.1| Putative Ornithine decarboxylase [Sagittula stellata E-37] gi|126710909|gb|EBA09960.1| Putative Ornithine decarboxylase [Sagittula stellata E-37] Length = 373 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 66/368 (17%), Positives = 120/368 (32%), Gaps = 25/368 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P + Y + + F + F G V YA+KAN + VI+ L+ G D+ S E+ Sbjct: 23 PVFFYDPERLTRMARRFIDGFPG---EVTYAVKANPDPVVIEALSRAGLQAFDVASPEEM 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 P R+ + ++ E+ A G+ ++V+ SEL+ L + Sbjct: 80 ALVRDVD-PKARLHYHNPVRSKAEVAAARAFGVVSWSVDRMSELEKLGDIEGAEIAVRLK 138 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + T KFG + +L G + + H G+Q Sbjct: 139 LPVAGAVYDFGT-----------KFGAAPEKAVALLRAVKDRGG--VPSITFHPGTQCRD 185 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 +++ + + H ++VGGG + A Sbjct: 186 AQAWVAYIAASARIAAEAGVTLH---RLNVGGGFPAHRNDPEPDLEVIFDAIRDAVRASF 242 Query: 267 LQCKI--ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + EPGR +VA+ L +V +I A + ++++ R Sbjct: 243 GDDAPALVCEPGRAMVAEAFELALQVKAICDGAVFLNDGIYGGLSEW-RDLSPSQRLTAY 301 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYN 383 D + + GP C++ D ++ + GD L GAY +N Sbjct: 302 AQDGTRRDGETVANTVFGPTCDSLDRLSDQVSLPEDLAEGDYLLFHACGAYSTALVTRFN 361 Query: 384 SRLLIPEI 391 + Sbjct: 362 GYGARKIV 369 >gi|146080148|ref|XP_001463945.1| ornithine decarboxylase [Leishmania infantum JPCM5] gi|321399074|emb|CBZ08415.1| putative ornithine decarboxylase [Leishmania infantum JPCM5] Length = 707 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 72/430 (16%), Positives = 136/430 (31%), Gaps = 85/430 (19%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + + + +A+K+N AV++ L+ LG+G D S+ E+ Sbjct: 258 PFYIIDLGRVVEQMARWRHELPM--VRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315 Query: 88 RA--LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + I+F+ K + ++ A G+ V++ E++ +++ S Sbjct: 316 MVLGRQLVASPDDIIFANPCKQLGDLREAQACGVTYVTVDNPLEMEKISRLMPSAHAIIR 375 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I T+ + KFG P+ + L A + GV H+GS D Sbjct: 376 I----------KTNDSKAQCSFSTKFGAPLEDVEGLLEAARQFNVT-VCGVSFHVGSGND 424 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY-----HSDHRPPSSSDYASLI 260 ++ A + + QQ G +D+GGG + + ++ Sbjct: 425 DQSAYVSAVRDAYQVFQQAVQYGFKCTILDIGGGFPGTEVVEGSGNTSFEAIARTIRPVL 484 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVIS--------------------IKKSADKT 300 + FG II EPGR+ A L+ V + ++ Sbjct: 485 AELFGGGDVTIISEPGRYFTAASHALLMNVFASRTLRLSDVEVSRQAFQSVVSMDEPEEY 544 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAG---------------DRLHIHADIVGP-- 343 ++ + L+D H ++N + GP Sbjct: 545 QYYVNDGLYHSFNCILFDHAHPTLLLLNDGDGADGVESGTEAAAVCSEEEGETSLSGPLA 604 Query: 344 ----------------------------ICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 C++ D I + + GD L + G+Y Sbjct: 605 NDALFMSAWDRRRSFARRPLRITTIFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYT 664 Query: 376 AVQSGTYNSR 385 +G +N Sbjct: 665 TAAAGFFNGF 674 >gi|118378|sp|P27116|DCOR_LEIDO RecName: Full=Ornithine decarboxylase; Short=ODC gi|159388|gb|AAA29259.1| ornithine decarboxylase [Leishmania donovani] Length = 707 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 72/430 (16%), Positives = 136/430 (31%), Gaps = 85/430 (19%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + + + +A+K+N AV++ L+ LG+G D S+ E+ Sbjct: 258 PFYIIDLGRVVEQMARWRHELPM--VRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315 Query: 88 RA--LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + I+F+ K + ++ A G+ V++ E++ +++ S Sbjct: 316 MVLGRQLVASPDDIIFANPCKQLGDLREAQACGVTYVTVDNPLEMEKISRLMPSAHAIIR 375 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I T+ + KFG P+ + L A + GV H+GS D Sbjct: 376 I----------KTNDSKAQCSFSTKFGAPLEDVEGLLEAARQFNVT-VCGVSFHVGSGND 424 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY-----HSDHRPPSSSDYASLI 260 ++ A + + QQ G +D+GGG + + ++ Sbjct: 425 DQSAYVSAVRDAYQVFQQAVQYGFKCTILDIGGGFPGTEVVEGSGNTSFEAIARTIRPVL 484 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVIS--------------------IKKSADKT 300 + FG II EPGR+ A L+ V + ++ Sbjct: 485 AELFGGGDVTIISEPGRYFTAASHALLMNVFASRTLRLSDVEVSRQAFQSVVSMDEPEEY 544 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAG---------------DRLHIHADIVGP-- 343 ++ + L+D H ++N + GP Sbjct: 545 QYYVNDGLYHSFNCILFDHAHPTLLLLNDGDGADGVESGTEAAAVCSEEEGETSLSGPLA 604 Query: 344 ----------------------------ICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 C++ D I + + GD L + G+Y Sbjct: 605 NDPLFMSAWDRRRSFARRPLRITTIFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYT 664 Query: 376 AVQSGTYNSR 385 +G +N Sbjct: 665 TAAAGFFNGF 674 >gi|15890809|ref|NP_356481.1| carboxynorspermidine decarboxylase [Agrobacterium tumefaciens str. C58] gi|15159095|gb|AAK89266.1| carboxynorspermidine decarboxylase [Agrobacterium tumefaciens str. C58] Length = 365 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 50/387 (12%), Positives = 103/387 (26%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T + +N + + ALK + +V ++ G S E Sbjct: 3 QTPYYLIDKTKLLRNMEKIAYVREKSGAKALLALKCFATWSVFDFMSQYMDGTTSSSLYE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + D+ + FN + E Sbjct: 63 VRLGRE-KFGGETHAYSVAYADYEIDDVIANADKIIFNSIGQLERF-------------- 107 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I P L + + + + Sbjct: 108 --ADKASGITRGLRLNPQVSSSSFDLADPARPFSRLGEWDVAKVDKIMDRISGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L + ++ S + + +GGG+ H + + + Sbjct: 166 ENGDFSLFDRMLTQIEEKFGSLLSRAEWVSLGGGI----HFTGDDYPLDQFCDRLRAFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KYGVQVYLEPGEASITKSTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + + G C GD R + GD + + Y V+ +N Sbjct: 276 TAKVSPNEGEHPYMVCGKSCLAGDIFGDFRFDKELKVGDRISFQDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I + +R F + Sbjct: 336 KMPA-IAIKELDGTVRAVRE-FDFADF 360 >gi|118498245|ref|YP_899295.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida U112] gi|194324429|ref|ZP_03058202.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida FTE] gi|95045105|gb|ABF50970.1| FigC [Francisella novicida U112] gi|118424151|gb|ABK90541.1| pyridoxal-dependent decarboxylase [Francisella novicida U112] gi|194321494|gb|EDX18979.1| diaminopimelate decarboxylase [Francisella tularensis subsp. novicida FTE] Length = 417 Score = 119 bits (298), Expect = 9e-25, Method: Composition-based stats. Identities = 78/407 (19%), Positives = 149/407 (36%), Gaps = 28/407 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 +E + +P + A+ + F A +++ Y++K S +I+ +G Sbjct: 19 IETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVG 78 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS E + + + I+F+G K + ALQ N + E+ + + Sbjct: 79 FIPEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAM-INCDHFDEILRIAK 137 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L A I R+ + T + S I + + ++++G Sbjct: 138 IAKKLNITAKIGLRI---ADNKTPQNWSRFGFALTDQQNNSDIFTTIDKIQQIANIQLAG 194 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIG+ I I F K + +L + + + GG Sbjct: 195 LHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQP 254 Query: 256 YASLIHQYF--------------GNLQCKIILEPGRFLV-ADVGILVTKVISIKKSADKT 300 Y + + N + K+I E GR LV V +L T V + +++ D Sbjct: 255 YNPFDLELYAATIIAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQ 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +I D ++ + Y D H ++GP C DF+ + + Sbjct: 315 SLITDAGIHTIPTISTYRHPIYHL-----KTDSYHKKTLLLGPSCMQHDFLHDDIFLPKL 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMT 406 GD L I+ GAY ++ + L I+++ + Q+ ++R R T Sbjct: 370 EYGDKLLIDGVGAYNISRNNEFI-HLKPSVILIDKNQQYQVLRVRQT 415 >gi|325300615|ref|YP_004260532.1| carboxynorspermidine decarboxylase [Bacteroides salanitronis DSM 18170] gi|324320168|gb|ADY38059.1| carboxynorspermidine decarboxylase [Bacteroides salanitronis DSM 18170] Length = 387 Score = 119 bits (298), Expect = 9e-25, Method: Composition-based stats. Identities = 54/387 (13%), Positives = 110/387 (28%), Gaps = 25/387 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P Y + KN + + + A KA + S Sbjct: 6 KVPSPCYVMEEDLLRKNLSLIKSVAERAGVEIILAFKAFALWKSFPIFREYIRHTTASSV 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A + T L+ S S+ + + + Sbjct: 66 YEARLAF--EEFGSKAHTYSPAYTDGNFADFLKY-SSHITFNSLSQYGRFYPKVKASSEP 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 R+NP+ + + + +FG+ + ++ Sbjct: 123 VSCGIRINPEYSEVEVELYNPCAPGTRFGVTADLLPD-----------RLPEGIEGFHCH 171 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S ++ + L+ + ++ ++ +++GGG + L Sbjct: 172 CHCESSSYELERTLKHIEEKFACWFPQLKWLNLGGGHLMTRKDYD---VEHLIGLLQGLK 228 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +IILEPG G LV V+ + +S +LDV+ M L Y Sbjct: 229 VRYPHLQIILEPGSAFAWQTGPLVASVVDVVESRGIRTAVLDVSFTCHMPDCLEMPYQPA 288 Query: 324 NYIVN-------PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 + G C +GD++ + + G+ + E Y Sbjct: 289 VRGAESLPAEAVKTARPDEHVYRLGGNSCLSGDYMGSWKFGHALQVGERIVFEDMIHYTM 348 Query: 377 VQSGTYNSRLLIPEIMVN-GSQFHIIR 402 V++ +N + + + + R Sbjct: 349 VKTNMFNGIHHPSIALCHSNGELEVYR 375 >gi|289644267|ref|ZP_06476354.1| Orn/DAP/Arg decarboxylase 2 [Frankia symbiont of Datisca glomerata] gi|289505915|gb|EFD26927.1| Orn/DAP/Arg decarboxylase 2 [Frankia symbiont of Datisca glomerata] Length = 562 Score = 119 bits (298), Expect = 9e-25, Method: Composition-based stats. Identities = 90/415 (21%), Positives = 143/415 (34%), Gaps = 49/415 (11%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA---------------- 72 Y Y N A + YA+KAN V+ LA Sbjct: 73 AYIYDLDVAAGNAARLKAALP-PWAAIFYAVKANGYPPVLDALAAGHGHGHGAQQAHSAQ 131 Query: 73 ------------HLGSGLDIVSEGELRRALAAPVP---AERIVFSGVGKTIDE----IDL 113 G ++ S E++ AL + RIV SG GK++ ++ Sbjct: 132 HTGSTGRSLPTGQGVDGFEVASSHEIQLALDSAQRIGRPARIVVSGPGKSVPLLATLVEA 191 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 A NVES EL+ LN A G++ P+ RVNP A G+ FGI Sbjct: 192 ARAGAEMTVNVESPGELRRLNHVAGRAGRQIPVTLRVNPSRVALAGSLRMGGEAS-AFGI 250 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 P + + A A +LP V ++G +H S + + + Sbjct: 251 PEADVPDVLAIARSLPWVDVAGFHVHAVSGNLDAAAHLDYVRWCLGYAADTAAAHGVDLR 310 Query: 234 IDVGGGLGIAYHSDH----RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 + GG P +A+ + +++ EPGR+LVAD G + Sbjct: 311 VVDVGGGLGVPFEPDRRGECPFDLDAFAAGLRATPVPAGVRVLFEPGRWLVADCGAYAAE 370 Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI-------NYIVNPAGDRLHIHADIVG 342 V +K + FV+L ++ F P ++ H P D +VG Sbjct: 371 VTDVKHAHGTDFVVLRGGIHHFQLPASWEIVHNFGVVAVDDWPYDFPRPDVAGRPVTVVG 430 Query: 343 PICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGS 396 +C D +A + + R GD++ GAYG + + + V+ Sbjct: 431 ELCTPEDTLARDITVDAVRAGDIVVFPMAGAYGYEFAMQGFLGHPPPVRVAVSRD 485 >gi|119385052|ref|YP_916108.1| Orn/DAP/Arg decarboxylase 2 [Paracoccus denitrificans PD1222] gi|119374819|gb|ABL70412.1| Orn/DAP/Arg decarboxylase 2 [Paracoccus denitrificans PD1222] Length = 387 Score = 119 bits (298), Expect = 9e-25, Method: Composition-based stats. Identities = 71/371 (19%), Positives = 131/371 (35%), Gaps = 20/371 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P ++ + + F F G +V YA+K+N ++AVI+TL+ G G D+ S E+ Sbjct: 30 PVMVFAPSVLRAAAQRFLQGFPG---LVTYAVKSNPDEAVIRTLSAAGVKGFDVASPYEI 86 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A R + ++ EI A+++GI ++V+S SEL L + I Sbjct: 87 DLIGRLAPDAARH-YHNPVRSQAEIAHAVEAGIKSWSVDSRSELDKL--FVRVPAENCEI 143 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + R + + KFG L + I + H G+Q Sbjct: 144 SPRFKLPVLGAAYDF------GSKFGASPELAAELLRAVADRGY--IPSLTFHPGTQCTD 195 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ ++ + + + + FG Sbjct: 196 PHAWESYITTAAEICAMAGVKARRLNVGGGFPSHRVTGVEPDLTAIFQLIRRVTDEAFGT 255 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +++ EPGR L AD L+T+V +++ + + D + + + Sbjct: 256 DAPQLVCEPGRGLCADAFALITRVKAVR--DGQNVFLNDGVYGGLFELPIVGNLDRLQVL 313 Query: 327 VNPAGDRLHIHA--DIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYN 383 R I GP C++ D + + + GD + GAY V + +N Sbjct: 314 TPEGTPREDEPMPRIIFGPTCDSVDRLPGELTLPANIQEGDYVIFHGAGAYSTVTNTRFN 373 Query: 384 SRLLIPEIMVN 394 L+ + VN Sbjct: 374 GFGLMAHLTVN 384 >gi|213582677|ref|ZP_03364503.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 351 Score = 119 bits (298), Expect = 9e-25, Method: Composition-based stats. Identities = 85/323 (26%), Positives = 147/323 (45%), Gaps = 16/323 (4%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 NV+S EL+ ++ + L K A + RV P++ + TH ++ T G+ + Q Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETC 201 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL- 240 +P V + G+ MH+G Q+ + E F KA K+L D +++ G I+VGGG+ Sbjct: 202 RRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIP 261 Query: 241 --GIAYHSDHRPPSSSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVT 288 + P + YA + Q + +I +EPGR + +L+T Sbjct: 262 VPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLT 321 Query: 289 KVISIKKSADKTFVILDVAMNDF 311 +V K+ + ++ Sbjct: 322 EVSCEKRKTNYDLNGNVECHVEW 344 >gi|155121993|gb|ABT13861.1| hypothetical protein MT325_M307L [Paramecium bursaria chlorella virus MT325] Length = 372 Score = 119 bits (298), Expect = 9e-25, Method: Composition-based stats. Identities = 82/360 (22%), Positives = 138/360 (38%), Gaps = 17/360 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY +E +S+ F + YA+K N+++ ++K LA G D S+ E+ + Sbjct: 19 FYVSDPKFVEHLTSVWSDIFPLI--QPFYAVKCNNDKVLLKVLADNGVNFDCASKNEITQ 76 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V + RI+F+ K+ D I A Q+G+ +S EL + I Sbjct: 77 VLKLGVDSSRIIFAHTVKSPDSIVFAKQAGVNLMTFDSSFELDKIKNYHPEAKMVLRIRC 136 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 K +K+G +I +L +A L +SG+ H+GS + Sbjct: 137 -----------DDPHALVKLEKYGALADEIETLLGHAKKLHIA-VSGISFHVGSGSRNPD 184 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS--SDYASLIHQYFGN 266 ++ KA K R+ + GH + ID+GGG+ + + I +F + Sbjct: 185 AYWKALKSAREAYDIATAMGHKVDIIDIGGGMYADIEDNGTVSTCVAEYVRDGIKDFFSD 244 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 K I EPGRF +L +V+ + ++ + +Y+ I Sbjct: 245 TGVKFIAEPGRFFAQHYSVLACQVVGKRVRDGYYEYFVNESTYGGFSNVIYEKAVPEPII 304 Query: 327 VNPAGDRLHIH-ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 V G+ H + I G C+ D I I D +Y GAY ++N Sbjct: 305 VKDVGENDEKHMSVIYGCTCDGIDVINKQTHIPELNIDDWIYFPMWGAYTNCLVTSFNGF 364 >gi|289177558|gb|ADC84804.1| Diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis BB-12] Length = 589 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 24/256 (9%) Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLG 241 + +++ GV HIGS I E+F +A K + L + +N + + +D+GGG Sbjct: 333 REIAKYGNLELVGVHSHIGSNIHDAEAFIQAAKRMMLLRKTFYATNAYTLPEVDLGGGYS 392 Query: 242 IAYHSDHRPPSSSD-------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 +AY D S ++ G I EPGR++VA G+ + +V Sbjct: 393 VAYTDDEDRMDVDRELGRLADAVSKTNRLLGMPAPIISFEPGRWIVAPAGVTLYRVGTVK 452 Query: 291 ----------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI 340 + ++ ++ ++ +D M+D +RP LYDA + + N + + Sbjct: 453 TVQLGDGFTNNAGERIRERAYISVDGGMSDNIRPALYDAKY-TAILANRESAEPAKLSRV 511 Query: 341 VGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 VG CE+GD + + GD+L + TGAYG + YN L+ + ++G H Sbjct: 512 VGIHCESGDIVVNEANLPADVHRGDILAVPVTGAYGRSMASNYNMALIPAVVGIDGHGAH 571 Query: 400 IIRPRMTFQELIELDS 415 ++ R T +L+ LD Sbjct: 572 VMMRRQTIDDLLALDV 587 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 G L ++ L +P Y + F ++AF T V YA KA Sbjct: 76 NGELTFHGITASTLLDEFGSPLYVLDLDEVRARASHFVKAAAHAFTNNTTHVSYAAKAFL 135 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ + + + G +D + GE++ ALAA VP R+V G K+ +EI+LA+ G Sbjct: 136 SKEMARIVTEEGMFVDTCTLGEMKIALAAGVPGRRLVLHGNNKSDEEIELAIAEGFSKIV 195 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 ++S E + A LGK+A + RV I+A H+ +ST ++ KFG+ + Sbjct: 196 IDSPDEPARIAAIAERLGKRARVMLRVTSGIHAGGHEYVSTAHEDQKFGVAL 247 >gi|323343102|ref|ZP_08083333.1| hypothetical protein HMPREF0357_11514 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463166|gb|EFY08361.1| hypothetical protein HMPREF0357_11514 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 390 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 79/401 (19%), Positives = 156/401 (38%), Gaps = 29/401 (7%) Query: 16 VSLEKLA---HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 ++L++L + ++TP Y + +E++ + +T +CYA+KAN ++ L Sbjct: 1 MNLKELCTSNNELKTPCYIFDVDFLEEHVKEIKASLP-NNTKLCYAMKANP--FLVGILD 57 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS-GIYCFNVESESELK 131 + ++ S GE R + +I+ SGV K ++I +Q + VES +L+ Sbjct: 58 KMVDSFEVCSPGEYRICQRNNISNLKIILSGVYKNSEDIREIIQMEEQPIYTVESMKQLE 117 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 LN + K+ + R+ ++FG+ +I + + + Sbjct: 118 LLNDLSTEYQKQINVILRL---------------TSGNQFGMDASEIERVLDQTNRYRFI 162 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 K G+ ++ G+Q ++ + L+ + LRS G + + P Sbjct: 163 KWHGIQLYSGTQKHKLNKVLGEIESLKSYIETLRSRYQISLPCLEFGPGLGVQYFESDKP 222 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + S N I+LE GR +VA G +T+V+ IK + K + ILD ++ Sbjct: 223 TLSVSEFSSVLRSLNYDGTIVLEMGRIIVAACGTYLTRVVDIKTNDMKHYAILDGGIHHV 282 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIH--ADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + + +H ++ G +C D + + + D++ + Sbjct: 283 SYYGQFLGMKCPSIERVDMEKSPELHAQWNLCGSLCTVADVLIKDYETP-LALNDVVAFK 341 Query: 370 KTGAYGAVQS-GTYNSRLLIPEIMVNGSQ-FHIIRPRMTFQ 408 GAY + + SR L + II R T + Sbjct: 342 NVGAYSITEGISLFLSRDLPQVNLYRKQTGIEII--RDTIE 380 >gi|183602800|ref|ZP_02964163.1| probable diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis HN019] gi|219683103|ref|YP_002469486.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis AD011] gi|241191433|ref|YP_002968827.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196839|ref|YP_002970394.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218038|gb|EDT88686.1| probable diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis HN019] gi|219620753|gb|ACL28910.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis AD011] gi|240249825|gb|ACS46765.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251393|gb|ACS48332.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794426|gb|ADG33961.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp. lactis V9] Length = 529 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 24/256 (9%) Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLG 241 + +++ GV HIGS I E+F +A K + L + +N + + +D+GGG Sbjct: 273 REIAKYGNLELVGVHSHIGSNIHDAEAFIQAAKRMMLLRKTFYATNAYTLPEVDLGGGYS 332 Query: 242 IAYHSDHRPPSSSD-------YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 +AY D S ++ G I EPGR++VA G+ + +V Sbjct: 333 VAYTDDEDRMDVDRELGRLADAVSKTNRLLGMPAPIISFEPGRWIVAPAGVTLYRVGTVK 392 Query: 291 ----------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI 340 + ++ ++ ++ +D M+D +RP LYDA + + N + + Sbjct: 393 TVQLGDGFTNNAGERIRERAYISVDGGMSDNIRPALYDAKY-TAILANRESAEPAKLSRV 451 Query: 341 VGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 VG CE+GD + + GD+L + TGAYG + YN L+ + ++G H Sbjct: 452 VGIHCESGDIVVNEANLPADVHRGDILAVPVTGAYGRSMASNYNMALIPAVVGIDGHGAH 511 Query: 400 IIRPRMTFQELIELDS 415 ++ R T +L+ LD Sbjct: 512 VMMRRQTIDDLLALDV 527 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 G L ++ L +P Y + F ++AF T V YA KA Sbjct: 16 NGELTFHGITASTLLDEFGSPLYVLDLDEVRARASHFVKAAAHAFTNNTTHVSYAAKAFL 75 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ + + + G +D + GE++ ALAA VP R+V G K+ +EI+LA+ G Sbjct: 76 SKEMARIVTEEGMFVDTCTLGEMKIALAAGVPGRRLVLHGNNKSDEEIELAIAEGFSKIV 135 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 ++S E + A LGK+A + RV I+A H+ +ST ++ KFG+ + Sbjct: 136 IDSPDEPARIAAIAERLGKRARVMLRVTSGIHAGGHEYVSTAHEDQKFGVAL 187 >gi|294675763|ref|YP_003576378.1| carboxynorspermidine decarboxylase [Rhodobacter capsulatus SB 1003] gi|294474583|gb|ADE83971.1| carboxynorspermidine decarboxylase [Rhodobacter capsulatus SB 1003] Length = 364 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 52/393 (13%), Positives = 112/393 (28%), Gaps = 40/393 (10%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TPFY TA+ +N + ALK + + + G S E Sbjct: 3 PTPFYLIDETALLQNLQKIDLLREASGAKALLALKCFATWSAFDIMRPHMDGTTSSSLYE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 LR + + S+ E+ A + + Sbjct: 63 LRLGR---------------------EKFGKETHAYSVAWSDREIDEACAYADKIIFNSV 101 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI----SGVDMHIG 201 + + + + + G + ++ K+ + + Sbjct: 102 GQLTRFAEPSQGIQRGVRLNPRFSTSGFDLADPARPFSRLGEWDVTKLLGVADLISGVMI 161 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + F L + ++ + + +GGG+ H + A + Sbjct: 162 HYNCENRDFALFDDQLGRIEREFAPLLEKLDWVSLGGGI----HFTGEGYPLEELAKRLK 217 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ LEPG + L V+ + + + ++ + +Y Sbjct: 218 TFSDRFGVQVYLEPGEASITKSTTLEVTVLDLLDNGKQLAIVDSSIEAHMLDLLIYRESA 277 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 ++ + A I G C GD R A + GD + + Y V+ Sbjct: 278 KLPQEGDHA-------YQICGKSCLAGDIFGEARFPAPLKVGDRISVADAAGYTMVKKNW 330 Query: 382 YNSRLLIPEIMVN--GSQFHIIRPRMTFQELIE 412 +N + I + Q +IR T+++ + Sbjct: 331 FNGVNMPS-IAIKRASGQIDLIRE-FTYEDYLS 361 >gi|150006033|ref|YP_001300777.1| carboxynorspermidine decarboxylase [Bacteroides vulgatus ATCC 8482] gi|254881795|ref|ZP_05254505.1| carboxynorspermidine decarboxylase [Bacteroides sp. 4_3_47FAA] gi|319641187|ref|ZP_07995888.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_40A] gi|149934457|gb|ABR41155.1| carboxynorspermidine decarboxylase [Bacteroides vulgatus ATCC 8482] gi|254834588|gb|EET14897.1| carboxynorspermidine decarboxylase [Bacteroides sp. 4_3_47FAA] gi|317387161|gb|EFV68039.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_40A] Length = 387 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 112/393 (28%), Gaps = 24/393 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P Y + KN + D + A K+ + S Sbjct: 6 KVPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFPIFREYIRYTTASSV 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A + D + S S+ + + G+K Sbjct: 66 YEARLAYEEFGSKAH---TYSPAYTDTDFPVIMRCSSHITFNSFSQFRRFYPMVEAFGEK 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 R+NP+ + + + +FG+ + + Sbjct: 123 ITCGIRINPEYSEVEVELYNPCAPGTRFGVTADLLPET-----------LPEGIEGFHCH 171 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S ++ L+ + ++ S I+ +++GGG + S + Sbjct: 172 CHCESSSYELEHTLQHIEEKFASWFPQIKWLNLGGGHLMTRKDYDTEHLISLL---KNLK 228 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +IILEPG G LV V+ I ++ ILDV+ M L Y Sbjct: 229 ARYPHLEIILEPGSAFTWQTGPLVASVVDIVENRGIKTAILDVSFTCHMPDCLEMPYQPA 288 Query: 324 NYIVNPAGDRLHIH-------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 + G C +GD++ + G+ + +E Y Sbjct: 289 VRGAKTLPVDAIKTALTEENVYRLGGNSCLSGDYMGSWCFDHPLQIGERIVLEDMIHYTM 348 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 V++ +N + + + +++ Sbjct: 349 VKTNMFNGIHHPSIAIWHTDNTLEVYKDFRYED 381 >gi|295090770|emb|CBK76877.1| carboxynorspermidine decarboxylase [Clostridium cf. saccharolyticum K10] Length = 395 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 111/386 (28%), Gaps = 21/386 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 V TP++ + KN + + A KA S + +G Sbjct: 26 VSTPYFLIDEERLRKNLEILKKVQEDTGCRILLAQKAFSTFFAYPLIREYLAGSTASGLY 85 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R E VFS + + +L + FN S+ RA Sbjct: 86 EARLGRE-EFGGETHVFSPAYREDEFEELLSYADHLVFNSPSQLRKYGERARAAGKSVGL 144 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + + H + G A + +D + Sbjct: 145 RVNPECSTQ---EGHAIYDPCAPGSRLGTT----------AENFDESLLPLLDGLHFHTL 191 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + S + ++ N++ +++GGG I +I + Sbjct: 192 CEQNSDA-LEQTAAAFEEKFGKYLGNMKWLNLGGGHHITRDD----YDVERLERIISHFR 246 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + LEPG +V + G LV+ V+ ILD + M L Y Sbjct: 247 DTYGLTVYLEPGEAVVLNAGFLVSTVL-ETVKNGIDIAILDTSAACHMPDVLEMPYRPPV 305 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 G++ + GP C GD I G + E Y V++ T+N Sbjct: 306 SDSGLPGEKA-FTFRLAGPTCLAGDVIGDYSFDTPLGAGSQVVFEDMALYTMVKTNTFNG 364 Query: 385 RLLIPEIMVNGSQFHIIRPRMTFQEL 410 L + + + + +++ Sbjct: 365 MALPSIVWRGLDKRETLIKKFGYEDF 390 >gi|260427552|ref|ZP_05781531.1| carboxynorspermidine decarboxylase [Citreicella sp. SE45] gi|260422044|gb|EEX15295.1| carboxynorspermidine decarboxylase [Citreicella sp. SE45] Length = 363 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 51/387 (13%), Positives = 115/387 (29%), Gaps = 32/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y + + N + + ALK + +V ++ G S E Sbjct: 2 QTPYYLIDKSRLLANMEKVARLRELSGAKALLALKCFATWSVFDLMSEYMDGTTSSSLFE 61 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++ P E +S + ++ S + + + + + Sbjct: 62 VKLGRE-KFPGETHAYSVAWADDEIDEVLASSDK--IIFNTVGQFSRFEEVSRGHTRGLR 118 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + V+ P L + + + + + Sbjct: 119 VNPGVST--------------SSFDLADPARPFSRLGEHDPEVIAPVLDQISGFMFHNNC 164 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F + +L + Q+ ++ I +GGG+ H A + ++ G Sbjct: 165 ENADFERFDAMLGAIEQRFGHLIREMKWISLGGGI----HFTGEGYPLERLAERLRRFAG 220 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + ++ LEPG + L V+ + ++ + +Y + Sbjct: 221 ENEVQVYLEPGEAAITKSTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYRESARMEQ 280 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + G C GD R A + GD + I+ Y V+ +N Sbjct: 281 SGDQEWM-------VCGKSCLAGDIFGEFRFPAPLKAGDRISIQDAAGYTMVKKNWFNGV 333 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I + ++R T+++ Sbjct: 334 KMPS-IAIRELDGTERLVRD-FTYEDF 358 >gi|118371177|ref|XP_001018788.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Tetrahymena thermophila] gi|89300555|gb|EAR98543.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Tetrahymena thermophila SB210] Length = 636 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 72/375 (19%), Positives = 141/375 (37%), Gaps = 26/375 (6%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 F Y++ + + + + YALK+N +++ L G+GLD+ S+G Sbjct: 233 FGQSFLVYNSHEALRKLNAWRSKLSWI--QPFYALKSNPIDPLVEDLCSNGAGLDVASQG 290 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E+++ L + A +++S K +I A Q+ + ++ E+ ++ A ++ Sbjct: 291 EIKKGLEMGISASNMIYSNPVKEEKDILYAAQNNVLYTTADTFDEIVKIHTLAPNMKILW 350 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I+ + T K + H + + + GV++ G+ H GS Sbjct: 351 RISITEDNSQQLAT----VFSNKFGDDITSLEDAHQKFKFIAQELGVRLHGIHFHCGSGK 406 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + SF KA + R + R GH ++ +D+GGG + A+L Sbjct: 407 NGSSSFLKAVNMARKCIEIGRQYGHAMEILDLGGGYPS------GDLNDKFIANLKDTCN 460 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP---------- 314 L ++I EPGR + L T++++ + KT ++ ++ Sbjct: 461 DPLGYRVIAEPGRHFSSQTCYLFTRILAKRSKQGKTCFHVNDSLYHSFNCVLMDGVSFEN 520 Query: 315 ---TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR-KIALPRPGDLLYIEK 370 Y + + I++ + G C+ D IA N + GD L Sbjct: 521 DNDQFYSVVNNNTLEQSEINKNSMINSSVFGMTCDGADVIARNVGFCGDAKVGDWLCFSG 580 Query: 371 TGAYGAVQSGTYNSR 385 G+Y +N Sbjct: 581 MGSYTFGPKSAFNGM 595 >gi|85708352|ref|ZP_01039418.1| diaminopimelate/ornithine decarboxylase [Erythrobacter sp. NAP1] gi|85689886|gb|EAQ29889.1| diaminopimelate/ornithine decarboxylase [Erythrobacter sp. NAP1] Length = 401 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 113/360 (31%), Gaps = 12/360 (3%) Query: 38 EKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPA 96 + F F G V YA+KAN +I+ L G D+ S E+R A Sbjct: 29 RRAAKYFVEKFPG---KVLYAVKANPAPDLIEVLWDAGVTHYDVASIAEVRLVRGLLPDA 85 Query: 97 ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA 156 + + + + G+ F++++ EL+ + + P + + Sbjct: 86 NLCFMHPIKRRRAIAEAYHEHGVKTFSLDTLEELEKIVEACSDPETGEPAT-DLRLCVRL 144 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL 216 + S KFG + + L GV H+GSQ +F +A Sbjct: 145 RVSSEYSELSLASKFGCDLLEAPQLLQA--CRQHCDWLGVCFHVGSQAMTPFAFVQALDR 202 Query: 217 LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPG 276 R + I + + + ++ EPG Sbjct: 203 TRAAIAEASVVIDMIDVGGGFPSIYPGMEPPPLEDYFAIIHQHFYALPIAYNAELWCEPG 262 Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI 336 R L A+ ++ +V + + ++ + + ++ + Sbjct: 263 RALCAEYSSMIVRVEKRR----GNELYINDGAYGALYDAAHVSWRFPVNALEDDLRDAVE 318 Query: 337 HADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 GP C+ D++A + + GD + I GAYGA +N ++V Sbjct: 319 DFAFYGPTCDDADYMAGPFPLPGDIQAGDFIEIGVLGAYGAAMKTGFNGFGDAEIVIVED 378 >gi|118590403|ref|ZP_01547805.1| carboxynorspermidine decarboxylase [Stappia aggregata IAM 12614] gi|118436866|gb|EAV43505.1| carboxynorspermidine decarboxylase [Stappia aggregata IAM 12614] Length = 365 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 53/389 (13%), Positives = 111/389 (28%), Gaps = 39/389 (10%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + +N + + ALK + V + G S E+ Sbjct: 4 TPYYLIDKAKLLRNMEKIAYVREKSGAKALLALKCFATWCVFDFMRDYMDGTTSSSLNEV 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + + ++ E+ + A + + Sbjct: 64 RLG---------------------HERFGKETHAYSVAYADYEIDDVISHADKIIFNSIS 102 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI----SGVDMHIGS 202 D +A + + + ++ KI + + Sbjct: 103 QLERYADKSAGIVRGLRLNPMVSSSSFDLADPARPFSRLGEWDVAKIEKVMDRISGFMIH 162 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F ++L D+ + + H + + +GGG+ H +A + Sbjct: 163 NNCENADFSLFDRMLGDIETKFGALLHRAEWVSLGGGI----HFTGDDYPLDLFADRLKA 218 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + N ++ LEPG + L T V+ + ++ + +Y Sbjct: 219 FSENYGVQVYLEPGEASITRSTTLETTVLDTLFNGKNLAIVDASIEAHMLDLLIY----- 273 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 A + I G C GD A + GD + I+ Y V+ + Sbjct: 274 -RETAKVAPNEGPHSYMICGKSCLAGDIFGEFNFPAELKTGDRVSIQDAAGYTMVKKNWF 332 Query: 383 NSRLLIPEIMVN--GSQFHIIRPRMTFQE 409 N + I V ++R ++Q+ Sbjct: 333 NGVKMPA-IAVKEVDGTVRVVRE-FSYQD 359 >gi|294778329|ref|ZP_06743754.1| carboxynorspermidine decarboxylase [Bacteroides vulgatus PC510] gi|294447836|gb|EFG16411.1| carboxynorspermidine decarboxylase [Bacteroides vulgatus PC510] Length = 387 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 112/393 (28%), Gaps = 24/393 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P Y + KN + D + A K+ + S Sbjct: 6 KVPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFPIFREYIRYTTASSV 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A + D + S S+ + + G+K Sbjct: 66 YEARLAYEEFGSKAH---TYSPAYTDTDFPVIMRCSSHITFNSFSQFRRFYPMVEAFGEK 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 R+NP+ + + + +FG+ + + Sbjct: 123 ITCGIRINPEYSEVEVELYNPCAPGTRFGVTADLLPET-----------LPEGIEGFHCH 171 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S ++ L+ + ++ S I+ +++GGG I S + Sbjct: 172 CHCESSSYELEHTLQHIEEKFASWFPQIKWLNLGGGHLITRKDYDTEHLISLL---KNLK 228 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +IILEPG G LV V+ I ++ ILDV+ M L Y Sbjct: 229 ARYPHLEIILEPGSAFTWQTGPLVASVVDIVENRGIKTAILDVSFTCHMPDCLEMPYQPA 288 Query: 324 NYIVNPAGDRLHIH-------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 + G C +GD++ + G+ + +E Y Sbjct: 289 VRGAKTLPVDAIKTALTEENVYRLGGNSCLSGDYMGSWCFDHPLQIGERIVLEDMIHYTM 348 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 V++ +N + + + +++ Sbjct: 349 VKTNMFNGIHHPSIAIWHTDNTLEVYKDFRYED 381 >gi|326933119|ref|XP_003212656.1| PREDICTED: arginine decarboxylase-like [Meleagris gallopavo] Length = 460 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 64/369 (17%), Positives = 124/369 (33%), Gaps = 31/369 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K +L F A + + ++ NS+ V++ LA LG+G ++ E+ Sbjct: 41 FFVADLGDIVKKHLRFLKALPRVKP--YFPVRCNSSGGVMRLLAELGAGFACANKTEIAE 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VPA++I +S K + I A G+ ++E EL + + IA Sbjct: 99 VQSIGVPADKIFYSSPCKQVAHIKYAASHGVQLMTFDNEVELGKVARSHPQARMLLGIAA 158 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 +P FG + L A ++ G+ H+GS + + Sbjct: 159 DPSPSA-----------HPSMMFGATLKSCRRLLESAKEQDV-EVVGISFHLGSHSLEPQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 F +A + G+ + +D+GGG + + + + + Sbjct: 207 VFAQAVAEAQLAFDMGTELGYRMHLLDIGGGFPGTEDTRAQFEEIAAVINSALDMYFPEG 266 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKT---------------FVILDVAMNDF 311 +I+ PGR+ V + ++ + + + D F Sbjct: 267 CGVEIVATPGRYYVTSAFTFAASITGKEEVPMEQPGSDGEESGSKRSLVYHLSDGIYGTF 326 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P + + + GP+ D I + ++ + GD L Sbjct: 327 SCVLFDSPCPKPLLHKKPCPEHPLCSSSLRGPLGHAEDQITNDVELPELQDGDWLIFRDM 386 Query: 372 GAYGAVQSG 380 GAY S Sbjct: 387 GAYTIATSS 395 >gi|57242753|ref|NP_001008729.1| ornithine decarboxylase antizyme inhibitor [Gallus gallus] Length = 450 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 71/378 (18%), Positives = 122/378 (32%), Gaps = 32/378 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + K + + N Y ++ NS V++ L LG G S+ E+ Sbjct: 40 FYVGDLGKLVKKNIQWQNVMA--PIKPFYTVRCNSTPGVLEILGTLGIGFACSSKSEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + E I+++ K +I A ++GI +S+ ELK + + + IA Sbjct: 98 VQGLGISPENIIYTNPCKQASQIKYAAKAGINIMTCDSDIELKKIARNHPNAKLLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A +I GV H+ +++ Sbjct: 157 ---------TEDITADEEMNMKFGTTLKNCRHLMECAKEFGV-QIVGVKFHVSGSCKELQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A R + G + +D+GGG + L + Sbjct: 207 TYIHAISDARCVFDMAEEFGFKMNMLDIGGGFTGSELQLEEVNHVIR-PLLDVYFPKESG 265 Query: 269 CKIILEPGRFLVADVGILVTKVIS------------------IKKSADKTFVILDVAMND 310 ++I EPG + V+ L VI+ T+ I D Sbjct: 266 IQVIAEPGCYYVSSAFTLAVNVIAKKAVDCDKLLPSGVEQARNDDEPVFTYYINDGVYGS 325 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 F Y D + + GP C+ D I N + GD L + Sbjct: 326 FASKLSEKLYTNPEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELSVGDWLIFDN 385 Query: 371 TGAYGAVQSGTYNSRLLI 388 G+ + T+N Sbjct: 386 MGSGTLGEQSTFNDYQRP 403 >gi|303275556|ref|XP_003057072.1| adenosylmethionine/pyridoxal dependant decarboxylase fusion protein [Micromonas pusilla CCMP1545] gi|226461424|gb|EEH58717.1| adenosylmethionine/pyridoxal dependant decarboxylase fusion protein [Micromonas pusilla CCMP1545] Length = 1019 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 64/406 (15%), Positives = 120/406 (29%), Gaps = 62/406 (15%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F + + + + YA+K N + V+ TLA LGS D S E+ Sbjct: 604 FLVVDLGVVTRRWHYWRATLPR--VQPHYAVKCNMDTRVLATLAALGSSFDCASPTEVDA 661 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 ++ V +RI+++ K + SG+ +S EL+ ++ + + Sbjct: 662 VISLGVSPDRIIYANPCKLPRHLAAVAGSGVSLTTFDSVGELEKISAL----APEMKVLL 717 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 R+ D + +K+G ++ L A L ++GV H+GS Sbjct: 718 RLRAD------DPDARCVLGNKYGAEPAEVKVLLEAAKRLGV-NVNGVSFHVGSGATNPL 770 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY----------AS 258 +F +A + R + G + GG + D S Sbjct: 771 AFREALEFARVAFDAAKELGLPPMEVLDIGGGFSGSIKADDASNDDDVTLAAVAGEVNKS 830 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 L + ++I EPGR+ L + S + + + + + + Sbjct: 831 LERLFPEAEGVRVISEPGRYFAEACVTLACMIFSRRIRSTEDGSLAPGEDSHQYFVSDGL 890 Query: 319 AYHEINYIVNP---------------------------------------AGDRLHIHAD 339 + + + + Sbjct: 891 YGMMNSIMYDHATVNSRLLPVATNAAALAAGNVDAVIPANVYAGDDAVVGNSRAKTYPST 950 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + GP C+ D I + GD L GAY +N Sbjct: 951 VFGPTCDGLDKIHEQTAMPELTVGDWLVFPHMGAYTVSAGSNFNGF 996 >gi|289629083|ref|ZP_06462037.1| ornithine decarboxylase, putative [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649702|ref|ZP_06481045.1| ornithine decarboxylase, putative [Pseudomonas syringae pv. aesculi str. 2250] gi|330867051|gb|EGH01760.1| ornithine decarboxylase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 371 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 80/373 (21%), Positives = 134/373 (35%), Gaps = 21/373 (5%) Query: 18 LEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +LA T FY I +N FS F G V YA+KAN + V++ L+ G Sbjct: 5 LAQLADDTNDT-FYTVDPRWITRNAQQFSGCFPG---TVLYAMKANPLEQVLEALSQGGI 60 Query: 77 -GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 D+ S E++ A + + + V + + G+ F ++SE EL L Sbjct: 61 NHFDVASLAEVQTVHNTLPNAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRD 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R A + + P+ ++ AS+ G Sbjct: 121 VLPERDSTISLFVRY-----APSESTAVYDLRGKFGASPVLATQLVHQVASSTDWS--LG 173 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-- 253 + H+GSQ + + A D +R +++H+D+GGG Y + Sbjct: 174 LSFHVGSQALEDGPWLAALN---DADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLV 230 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 I +I E GR LV L +V+S ++ + + + + Sbjct: 231 GRVCDHIQTSPTLKDLNLICEAGRGLVYGGMSLFARVLSRREQSVFCGAGIFGGLLSAQQ 290 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 + A + NP +I GP C++ D +A +A R D L + TG Sbjct: 291 WLQFPA--RVWRDGNPYTGAAENTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTG 348 Query: 373 AYGAVQSGTYNSR 385 AY +N Sbjct: 349 AYSVSLRTPFNGF 361 >gi|319943411|ref|ZP_08017693.1| carboxynorspermidine decarboxylase [Lautropia mirabilis ATCC 51599] gi|319743226|gb|EFV95631.1| carboxynorspermidine decarboxylase [Lautropia mirabilis ATCC 51599] Length = 366 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 51/386 (13%), Positives = 101/386 (26%), Gaps = 31/386 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y T + N T + + ALK + +V + G S E Sbjct: 4 PTPCYLIDETRLRTNLETIARLRERSGAKALLALKCFAGWSVFPLMREYLDGTTSSSLNE 63 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + + A + ++ + + Sbjct: 64 VRLGHE-KFGGETHGYSVAWAPGEVTEAA----------------RLADKLIFNSISQLK 106 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + P L + + Sbjct: 107 RLSNLCGKTPLGLRLNPGVSNSPYLLADPARPNSRLGESDPARIEQVADLISGVMIHNNC 166 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + S + +L + + + + +GGG+ A + + Sbjct: 167 ENRSLEQFSGMLDRIERTFGPLLKRLSWVSLGGGIHYTAPG----YPLEALADRLRAFAD 222 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 +Q ++ LEPG V L V+ + + A +I + Y Sbjct: 223 RMQVQVYLEPGEAAVTGAATLEVTVLDVLERAKPIAIIDASIEAHMLDLLTY------EL 276 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D + G C GD RPGD + ++ Y V+ +N Sbjct: 277 PARVLPDEGPWRCQLAGNTCLAGDIFGEFSFPHPLRPGDRISLQDAAGYTMVKKNWFNGV 336 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQE 409 + I V + ++ R +++ Sbjct: 337 PMPA-IAVRRLDGRIE-MQRRFGYED 360 >gi|94498726|ref|ZP_01305276.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas sp. SKA58] gi|94421825|gb|EAT06876.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas sp. SKA58] Length = 355 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 85/355 (23%), Positives = 142/355 (40%), Gaps = 15/355 (4%) Query: 51 MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDE 110 + YA+KAN ++ +A G DI S GEL AL A + +RI F+G GK DE Sbjct: 3 AGIDLHYAIKANPFAPLLSRMAVQVDGFDIASGGELGMALEAGMAPDRISFAGPGKRTDE 62 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 + A+ +G+ E + ++GK+ +A RVNPD + G + Sbjct: 63 LTAAIFAGVTINLESEG-EARRAIAAGEAIGKQPRLAIRVNPDFDLKGSGMRMGGGAK-P 120 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH- 229 FG+ + +L + G G + GSQ ++ L +L Sbjct: 121 FGVDADRAAALARWIID-AGANWRGWHIFAGSQNLDAQAIIDTQAATIALAARLSQEVGA 179 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC-----KIILEPGRFLVADVG 284 +++GGG G+AY P + + + + LE GR+LV + G Sbjct: 180 TPPLVNLGGGFGLAYFPGDTPLDIRPVGVALGRALESRPPILAGSRFALELGRWLVGEAG 239 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDF-----MRPTLYDAYHEINYIVNPAGDRLHIHAD 339 + +T+V+ +K S + FV++D ++ T+ + I Sbjct: 240 VYLTRVVDVKDSQGERFVVVDGGLHHQLAASGNFGTVIRRNYPIALASRFDAAPALDPVT 299 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMV 393 IVG +C D + + GDL+ I GAYGA S + E+++ Sbjct: 300 IVGCLCTPIDRLGEKVALPQISEGDLIAIFLAGAYGASASPMAFLGHPPARELLL 354 >gi|332710210|ref|ZP_08430161.1| diaminopimelate decarboxylase [Lyngbya majuscula 3L] gi|332350989|gb|EGJ30578.1| diaminopimelate decarboxylase [Lyngbya majuscula 3L] Length = 407 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 131/385 (34%), Gaps = 15/385 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 L K+A + TP Y AI N + ++ +C A+KAN Q+V++ +A LG Sbjct: 36 LFKIASDIPTPALVYDLDAITDTVTALRNDLRQIQNSELCLAVKANRCQSVLRHMAKLGL 95 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G DI + EL A+AA + I + G ++ ++ G+ Sbjct: 96 GADITTIQELDAAMAAGL--WPIYSTAPGFSVADLKRLATEGVIPDLCSLSQLRVWCESV 153 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + F + D A + + +FG+ + ++ V Sbjct: 154 NRDKRVGLRLRFPFHEDAKAK-----NAVTRWSRFGVDPTDSGLHS----LIQTHELEVV 204 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +H+ DL ++ +++GGG +H Sbjct: 205 HLHVHEGET---FSEADLHQTLDLLVSCLEIFPKVEVLNLGGGWAYLFHLQKPEAQRVWD 261 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 N Q + + + ++ +++ K+AD + + D L Sbjct: 262 LVNKTITRINNQRQQPVRLVIEPGMLLTMMAGYLVAEVKAADDHPSGNRIVVLDTSAWNL 321 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 P + D+ G C D+ LN K+A GD + + +GAY + Sbjct: 322 MFWAPRPAVAQIPFREGPMFVHDLAGCTCYETDYFCLNEKMARIEVGDRVILNASGAYTS 381 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHII 401 + + + + E ++ ++ ++ Sbjct: 382 SVARSLHGLPIPKEFVIRDNRLCLV 406 >gi|270339902|ref|ZP_06006380.2| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270333376|gb|EFA44162.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 401 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 67/398 (16%), Positives = 129/398 (32%), Gaps = 16/398 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGSGLD 79 + TP + ++ F A ++V Y++K N+ +K G + Sbjct: 9 VQQLNTPCFVLDEKELKDCVSQFQLALSKQFAHSVVGYSVKTNALPYCLKVAKENGCFAE 68 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 +VS E AL I+++G K+ + A+Q N+E+ E+ L+ Sbjct: 69 VVSFQEYELALEIGFDKRHIIYNGPLKSKETFLDAIQHD-AIVNIETWREIDWLDDLPKD 127 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + I +N + F V++ G+ H Sbjct: 128 QKYEIGIRLNINTTAISKEDAFGENDDSRFGFSYESGDFKKAVELIRAKSHVRLVGIHTH 187 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 + + S +++ + L + +++ DVGGG + Sbjct: 188 ---KEPKTRSVRFYQRVIAYVLPILTTLHLQLEYWDVGGGFFGPMPGKPTFDDYARCFRT 244 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + ++++EPG L++ V VI +K+ + FV D ND + Sbjct: 245 ALEDSPYANVRLVVEPGNALLSSPFSYVCSVIDVKQHDGRRFVTTDGTRNDVDPFFHKED 304 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL----PRPGDLLYIEKTGAYG 375 Y + + H + G C D + + GD + ++ GAY Sbjct: 305 YFKRFVYTD-TPQLCHQPQVVGGLTCLEYDRL---FTLPEGAETLSVGDRVIFDRVGAYT 360 Query: 376 AVQSGTYNSRLLIPEIM-VNGSQFHIIRPRMTFQELIE 412 + + L + N + IIR E I Sbjct: 361 MALTPLFI-HYLPTVYLKRNDGDYSIIRKEWGVSEFIR 397 >gi|212692988|ref|ZP_03301116.1| hypothetical protein BACDOR_02489 [Bacteroides dorei DSM 17855] gi|237725614|ref|ZP_04556095.1| carboxynorspermidine decarboxylase [Bacteroides sp. D4] gi|212664457|gb|EEB25029.1| hypothetical protein BACDOR_02489 [Bacteroides dorei DSM 17855] gi|229436301|gb|EEO46378.1| carboxynorspermidine decarboxylase [Bacteroides dorei 5_1_36/D4] Length = 387 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 59/393 (15%), Positives = 113/393 (28%), Gaps = 24/393 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P Y + KN + D + A K+ + S Sbjct: 6 KVPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFPVFREYIRYTTASSV 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A + D + S S+ + + G+K Sbjct: 66 YEARLAYEEFGSKAH---TYSPAYTDTDFPVIMQCSSHITFNSFSQFRRFYSMVKASGEK 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 R+NP+ + + + +FG+ + + Sbjct: 123 ISCGIRINPEYSEVEVELYNPCAPGTRFGVTADLLPET-----------LPEGIEGFHCH 171 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S ++ L+ + + I+ +++GGG + S L +Y Sbjct: 172 CHCESSSYELEHTLQHIEETFARWFPQIKWLNLGGGHLMTRKDYDTEHLISLLKGLKARY 231 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +IILEPG G LV V+ I ++ ILDV+ M L Y Sbjct: 232 PHL---EIILEPGSAFTWQTGPLVASVVDIVENRGIKTAILDVSFTCHMPDCLEMPYQPA 288 Query: 324 NYIVNPAGDRLHIH-------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 + G C +GD++ R + G+ + +E Y Sbjct: 289 VRGAEALPVDAIKTALTEENIYRLGGNSCLSGDYMGSWRFDHPLQVGERIVLEDMIHYTM 348 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 V++ +N + + + +++ Sbjct: 349 VKTNMFNGIHHPSIAIWHTDNTLEVYKDFRYED 381 >gi|218779264|ref|YP_002430582.1| Orn/DAP/Arg decarboxylase 2 [Desulfatibacillum alkenivorans AK-01] gi|218760648|gb|ACL03114.1| Orn/DAP/Arg decarboxylase 2 [Desulfatibacillum alkenivorans AK-01] Length = 441 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 93/407 (22%), Positives = 148/407 (36%), Gaps = 53/407 (13%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGSG 77 LA V Q P Y ++K+ F NAF D YA+K+N++ V +TL G G Sbjct: 51 DLAEVHQEPLYVLDHANLKKHAAMFKNAFGACFSDFACYYAMKSNNHPEVSRTLIDQGFG 110 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 LD+ S E+ RAL A + I + SG ++S E+ LN+ A Sbjct: 111 LDVSSGVEVERAL-ALGAEDVIFSGPGKTDKELFLAVENSGRVKVLMDSLGEMDRLNRLA 169 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + GK+ + R+ P + KFG+ + + + + A PG++I G+ Sbjct: 170 MQAGKRVRVGLRITPPSS-----------PWKKFGVALANLGAAWKKAQECPGLEIQGLQ 218 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP------- 250 H +D + + R++ Q ++ +D+GGG Sbjct: 219 FHTSWNLDPSQQVRTIAAIGREIGQWSPEMLGALKFLDIGGGYWPQAGEWQVHAVTQAGQ 278 Query: 251 -----------PSSSDYASLI--------------HQYFGNLQCKIILEPGRFLVADVGI 285 P YA F + C+I +EPGR+L Sbjct: 279 VMKLAGLDVDRPLEHYYAPAQSLDVFAQSLYQAVETHIFSTVPCRICMEPGRWLCNGAMH 338 Query: 286 LVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 L+ V+ K VI D N Y + + PA D +I+G +C Sbjct: 339 LLLNVVDKKDGG---LVITDAGTNAIGWERYEMDYAPVLNLSRPALD--EKACEIMGSLC 393 Query: 346 ETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 D L+ +PGD+L I GAY + P ++ Sbjct: 394 TPHDLWGLSYWGQDIQPGDVLLIPDQGAYTYSLKQDF--IKAPPRVI 438 >gi|153806559|ref|ZP_01959227.1| hypothetical protein BACCAC_00829 [Bacteroides caccae ATCC 43185] gi|149131236|gb|EDM22442.1| hypothetical protein BACCAC_00829 [Bacteroides caccae ATCC 43185] Length = 366 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 57/376 (15%), Positives = 114/376 (30%), Gaps = 18/376 (4%) Query: 34 TTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAP 93 + KN + D + A K+ + S E R A Sbjct: 3 EELLRKNLSLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYEARLA--LE 60 Query: 94 VPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD 153 + T + ++ S ++ + V+ G RVNP+ Sbjct: 61 EFGSKAHTYSPAYTEQDFPEIMRC-SSHITFNSMAQFERFYPMTVAKGGGISCGIRVNPE 119 Query: 154 INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKA 213 + + + +FGI + + S + Sbjct: 120 YSEVETELYNPCAPGTRFGITADLLPDT-----------LPQGIEGFHCHCHCESSSFEL 168 Query: 214 FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL 273 + L L ++ ++ +++GGG + L +Y +IIL Sbjct: 169 ERTLEHLEEKFSRWFPQLKWLNLGGGHLMTRKDYDTEHLIKLLQGLKARYPHL---RIIL 225 Query: 274 EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR 333 EPG G+L ++V+ I +S IL+V+ M L Y + Sbjct: 226 EPGSAFTWQTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEG 285 Query: 334 LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 +I + G C +GD++ L + G+ + E Y V++ +N + Sbjct: 286 KYI-YRLGGNSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIALW 344 Query: 394 NGSQFHIIRPRMTFQE 409 I + ++++ Sbjct: 345 TKEGKAEIYKQFSYED 360 >gi|254713089|ref|ZP_05174900.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M644/93/1] gi|254716558|ref|ZP_05178369.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M13/05/1] gi|261218356|ref|ZP_05932637.1| carboxynorspermidine decarboxylase [Brucella ceti M13/05/1] gi|261320795|ref|ZP_05959992.1| carboxynorspermidine decarboxylase [Brucella ceti M644/93/1] gi|260923445|gb|EEX90013.1| carboxynorspermidine decarboxylase [Brucella ceti M13/05/1] gi|261293485|gb|EEX96981.1| carboxynorspermidine decarboxylase [Brucella ceti M644/93/1] Length = 365 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 114/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y T +++N + + ALK + +V ++ G S E Sbjct: 3 QTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSLNE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 63 VRLGHE-KFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERF------ADKASGIK 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP +++++ P L + + + + Sbjct: 116 RGLRLNPGVSSSSFD----------LADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F ++L D+ ++ S H ++ + +GGG+ H + + + + Sbjct: 166 ENSDFSLFDRMLSDIEEKFGSLLHRVEWVSLGGGI----HFTGEDYPVDAFCARLKSFSE 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 KFGVQVYLEPGEASITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + + G C GD GD L E Y V+ +N Sbjct: 276 KAKMAPNNGGHSYMVCGKSCLAGDIFGEFTFDKSLAIGDRLSFEDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I V +R + + Sbjct: 336 KMPA-IAVRELDGTVKFVRE-FDYADF 360 >gi|271962014|ref|YP_003336210.1| diaminopimelate decarboxylase-like protein [Streptosporangium roseum DSM 43021] gi|270505189|gb|ACZ83467.1| Diaminopimelate decarboxylase-like protein [Streptosporangium roseum DSM 43021] Length = 276 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 3/168 (1%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G A VSL +++ TP Y T + + + A D + YA KA +A+ Sbjct: 32 DGDATAGGVSLVEISTRFGTPAYVLDETDVRERCRAYRAALP--DAEIAYAAKAFLCRAM 89 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G GLD+ S GEL A + PA+RI+F G KT E+ A+ +G+ V++ Sbjct: 90 AGWVREEGLGLDVCSGGELTFACSIGFPADRIIFHGNAKTPQELRGAVAAGVGRIVVDNL 149 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 +E+ L + G++ + RV PDI H+ TG ++ KFG+ + Sbjct: 150 AEINRLAALIPA-GRRQKVLLRVIPDIEGGAHEATRTGGEDQKFGLSV 196 Score = 76.4 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 340 IVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + G CE GD IA + ++ RPGD++ + TGAY + TYN Sbjct: 216 LAGLHCEAGDTIAEDVELPADIRPGDVIVVAATGAYHHSMASTYNMTARP 265 >gi|330891534|gb|EGH24195.1| ornithine decarboxylase [Pseudomonas syringae pv. mori str. 301020] Length = 371 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 79/373 (21%), Positives = 133/373 (35%), Gaps = 21/373 (5%) Query: 18 LEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +LA T FY I +N FS F G V YA+KAN + V++ L+ G Sbjct: 5 LAQLADDTNDT-FYTVDPRWITRNAQQFSGCFPG---TVLYAMKANPLEQVLEALSQGGI 60 Query: 77 -GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 D+ S E++ A + + + V + + G+ F ++SE EL L Sbjct: 61 NHFDVASLAEVQTVHNTLPDAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRD 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R A + + P+ ++ AS+ G Sbjct: 121 VLPERDSTISLFVRY-----APSESTAVYDLRGKFGASPVLATQLVHQVASSTDWS--LG 173 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-- 253 + H+GSQ + + A D +R +++H+D+GGG Y + Sbjct: 174 LSFHVGSQALEDGPWLAALN---DADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLV 230 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 I +I E GR LV L +V+S ++ + + + + Sbjct: 231 GRVCDHIQTSPTLKDLNLICEAGRGLVYGGMSLFARVLSRREQSVFCGAGIFGGLLSAQQ 290 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 + A + P +I GP C++ D +A +A R D L + TG Sbjct: 291 WLQFPA--RVWRDGTPYTGAAENTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTG 348 Query: 373 AYGAVQSGTYNSR 385 AY +N Sbjct: 349 AYSVSLRTPFNGF 361 >gi|167751940|ref|ZP_02424067.1| hypothetical protein ALIPUT_00182 [Alistipes putredinis DSM 17216] gi|167660181|gb|EDS04311.1| hypothetical protein ALIPUT_00182 [Alistipes putredinis DSM 17216] Length = 464 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 53/446 (11%), Positives = 125/446 (28%), Gaps = 38/446 (8%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV------ 55 F + L+ ++ L +L TP I + F+ V Sbjct: 18 DEFTVEDNELNFHDIPLMELIKQYGTPLKITYLPKISQQINRAKRMFNVAMAKVDYKGTY 77 Query: 56 --CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPV----PAERIVFSGVGKTID 109 CY K++ V++ L+ S ++ A +R + K Sbjct: 78 NYCYCTKSSHFSFVLEEAMKNDIHLETSSAYDIHIINALYDSGVIDKDRYIICNGFKRPQ 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 ++ Q F + + T + Sbjct: 138 YVENIAQLINDGFENTIPVIDNKEEIDLYDDAITQKCKIGIRIASEEEPKFEFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 ++ I+ K+ + I + I + ++ +L++ Sbjct: 198 RYNDIIN---FYKTKIQKNKKFKLKMLHFFINTGIKDTAYYWNELSKCLNIYCELKAICP 254 Query: 230 NIQHIDVGGGLG------IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADV 283 ++ +++GGG +Y ++ I G + I E G F V + Sbjct: 255 DLDSLNIGGGFPIKNSLDFSYDYEYLTEEIIAQIKNICTRNGIDEPHIFTEFGSFTVGES 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G + +++ K+ D+ + + P + + D+ + + G Sbjct: 315 GATLYSIVNQKQQNDRENWYMIDSSFITTLPDTWGINQRYIMLAINNWDKEYQRVLLGGL 374 Query: 344 ICETGDFI-----ALNRKIALPRPG--DLLYIEKTGAYGAVQSG----TYNSRLLIPEIM 392 C++ DF + PG + TGAY G + ++ Sbjct: 375 TCDSEDFYNSESHINAIFLPKLEPGNPQYIGFFHTGAYQESIGGFGGIQHCLIPAPKHVI 434 Query: 393 VNGSQ------FHIIRPRMTFQELIE 412 ++ + + +++ ++ Sbjct: 435 IDRDKDDNEYYTRLFAKEQSYRSMLR 460 >gi|161830669|ref|YP_001596639.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA 331] gi|161762536|gb|ABX78178.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA 331] Length = 396 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 67/376 (17%), Positives = 126/376 (33%), Gaps = 26/376 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P + + A+ + F FDG V YA+K N + VI+ + G D+ S E+ Sbjct: 17 PVFAFRPAALGRAVNYFCTQFDG---RVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEI 73 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R AE V + + G+ F+++ EL + + + Sbjct: 74 RIIKEYAPGAELYFMHPVKSPHAIREAYFEYGVRHFSLDCLEELHKILRHTENAK----- 128 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + + +KFGI +H+ L + Sbjct: 129 --DLCLHLRLAIPNTFAEFNLAEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPD 186 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ---- 262 A+++ + ++ + GG + + PP+ + Y IH Sbjct: 187 ------AYRIAIRMADKVINEAQVEIESFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAK 240 Query: 263 -YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +++ EPGR LVA+ ++ V K ++ D P + + Sbjct: 241 VAQRHPGIQLLCEPGRSLVAESTSVIVNVELRKDDILYINDGTYGSLFDAGIP--HFIFP 298 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSG 380 D + GP C++ D++ + + GD + I + GAYG S Sbjct: 299 VHLLRPKHTADVDLLPFSFYGPTCDSLDYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLST 358 Query: 381 TYNSR-LLIPEIMVNG 395 +N IMV+ Sbjct: 359 AFNGFKQREGVIMVSD 374 >gi|212703833|ref|ZP_03311961.1| hypothetical protein DESPIG_01885 [Desulfovibrio piger ATCC 29098] gi|212672801|gb|EEB33284.1| hypothetical protein DESPIG_01885 [Desulfovibrio piger ATCC 29098] Length = 409 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 65/415 (15%), Positives = 118/415 (28%), Gaps = 48/415 (11%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ---AVIKTLAHLG--SG 77 V +P + + N + + ALK + +++ G G Sbjct: 11 RTVPSPCFVLDEARLAANAAILDSVQQRTGAKILLALKGFAAWDSFSLLSRAKGHGPLWG 70 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK--TLNQ 135 S E R E F+ + +L FN ++ E + Sbjct: 71 TCASSVDEARLGRE-EFGGEVHAFAAGWTEEELDELLPLVDHLVFNSLAQWERFGPKVRD 129 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 G++ R+NP+ + + + GI HQ+ LP Sbjct: 130 WCRDNGREISCGLRINPEHSEGAVAIYNPCSPGSRLGIRPHQLPET------LPEGISGL 183 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + Q + L + + + I+ GGG +H Sbjct: 184 HFHTLCEQGSDA-----LERTLDAVEARFGKQLAQCKWINFGGG----HHITREGYDLDR 234 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 I + N +I LEPG + + G LV V+ + ++ ++ A Sbjct: 235 LCRCITRMQQNYGAQIYLEPGEAVALNAGWLVATVLDVVQADMPIAILDTSASCHMPDVL 294 Query: 316 LYDAYHEINYIVNPA------GDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + + + G C GD I A + GD L Sbjct: 295 EMPYRPNLLAPEDGELRLAGENGEKPWTCRLAGKSCLAGDVIGEYSFAAPLKAGDRLIFT 354 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGS--------------QFHIIRPRMTFQEL 410 Y V++ T+N L GS +F ++R R +++ Sbjct: 355 DMAIYSMVKTTTFNGLRLPSI----GSLAADLDAAAPAATARFRLVR-RFGYEDF 404 >gi|288958285|ref|YP_003448626.1| ornithine decarboxylase [Azospirillum sp. B510] gi|288910593|dbj|BAI72082.1| ornithine decarboxylase [Azospirillum sp. B510] Length = 427 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 72/376 (19%), Positives = 125/376 (33%), Gaps = 18/376 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD------GMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 P +C + +F AF G V YA+K N AV++ L G D+ Sbjct: 46 PMHCIRPGVLADTADSFLAAFTEAADAVGRGGDVLYAVKCNPEPAVLRALWAGGVRHFDV 105 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S GE+R A V + Q G+ F ++S+ EL + + + + Sbjct: 106 ASPGEIRLIRQMFPDAVLHYMHPVKGRQAIRNAYHQYGVRDFVLDSQEELTKILEESGNA 165 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + P NA KFG + L A + G+ H+ Sbjct: 166 ADLGLVIRLALPKGNA-------VYDLSGKFGASLTDAVELLRAARAVAPK--VGLSFHV 216 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 GSQ+ ++ +A L + + + + A + Sbjct: 217 GSQMLDPSAYERAIALAGYVIAESGVAIDMLDVGGGFPVSYPGVTPPPLGDFMAAIARGV 276 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 C++ EPGR LVA LV +V+ + + A++D + Sbjct: 277 ASIDLPSHCRLWCEPGRALVAPGVSLVVQVVKRRGDELFINDGVYGALSDAG-VPGFRFP 335 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQS 379 + GD GP C++ D +A + + GD + + + GAYG+ Sbjct: 336 ARLIRPFEAMGDNGEAAFSFYGPTCDSADKMAGPFILPADVKAGDWIELGQLGAYGSCLR 395 Query: 380 GTYNSRLLIPEIMVNG 395 +N + V+ Sbjct: 396 TAFNGFDQARVVEVSD 411 >gi|158523253|ref|YP_001531123.1| Orn/DAP/Arg decarboxylase 2 [Desulfococcus oleovorans Hxd3] gi|158512079|gb|ABW69046.1| Orn/DAP/Arg decarboxylase 2 [Desulfococcus oleovorans Hxd3] Length = 420 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 77/400 (19%), Positives = 124/400 (31%), Gaps = 39/400 (9%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGSG 77 LA +P Y + + F AF D +A+K+N+ V KTL G G Sbjct: 34 DLAATHGSPLYVLEPDVLVRQAQAFQGAFSAKLPDPGFFFAVKSNNCPEVSKTLVSCGFG 93 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID-LALQSGIYCFNVESESELKTLNQR 136 LD+ S EL A A IVFSG GKT +E+ G ++S E++ L Sbjct: 94 LDVSSGEELAMA--LDTEATTIVFSGPGKTTEELALAVANRGRVTVLIDSFGEMERLEA- 150 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 +A + A + KFGI ++ Y + T V ++G+ Sbjct: 151 ---------VAATAQTTVLAGVRLTTAADGLWRKFGILPERLADFYETSKTCGHVNLAGL 201 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H +D +L L + + + ID+GGG P + Sbjct: 202 QFHTSWNLDPKAHVAFIERLGAVLARMPITFIRQLAFIDIGGGFWPEQGEWLHHPEGTPA 261 Query: 257 ASLIHQYFGNLQCK----IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 + I + + V + V ++ + + AM M Sbjct: 262 DPKTSFSHVRPHFRLPARPITDFAGAIGEAVRRHIFPVADVRICMEPGRWVCHPAMQLLM 321 Query: 313 RP-------------------TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 R + D I+G +C D Sbjct: 322 RVIDRKADDLVVTDAGTNAIGWERFETDYFPVLNLSRPDTREQPCLILGSLCTPHDVWGF 381 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 GD+L I GAY + + L +++ Sbjct: 382 GYFGKNIAEGDILLIPAQGAYTYSLRQNFI-KPLPRLVIL 420 >gi|163739655|ref|ZP_02147064.1| Putative Ornithine decarboxylase [Phaeobacter gallaeciensis BS107] gi|161387114|gb|EDQ11474.1| Putative Ornithine decarboxylase [Phaeobacter gallaeciensis BS107] Length = 383 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 72/379 (18%), Positives = 128/379 (33%), Gaps = 26/379 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P +S + + F + F G +V YA+KAN + AV+ L G G D+ S E+ Sbjct: 23 PILYFSPRVLHEVANRFQHGFPG---LVTYAVKANPHPAVLSNLVAAGITGFDVASPAEM 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 AA A + ++ ++ EI + G+ ++V+ SEL L S Sbjct: 80 DAVRAASPDA-VMHYNNPVRSDVEIAAGIAHGVASWSVDEPSELDKLADVPKSCEIAVRF 138 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A V KFG L + + + Sbjct: 139 ALPVAGAA----------YDFGSKFGAEPDMAIELLKRVAAEGWTPALCFHPGTQCEDES 188 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ--YF 264 + + + + G I ++VGGG A + F Sbjct: 189 AWVEYVHAAK-----RIIDAAGVKIARLNVGGGFAANRDGVAPDLEKVFAAIWVAVDAAF 243 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN-DFMRPTLYDAYHEI 323 G+ + +I EPGR +V++ L ++ I+K+ + F+ V +R E+ Sbjct: 244 GDDKPGLICEPGRAMVSESFTLAARIKGIRKAGEVVFLNDGVYGGLVDIRDMGLPGRVEV 303 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTY 382 + GP C++ D + + + GD + GAY + S + Sbjct: 304 VAADGTRRGADAQPRVVFGPTCDSLDRLPDGLPLPRDTQIGDYVLFPGLGAYSSAMSTQF 363 Query: 383 NSRLL--IPEIMVNGSQFH 399 N L + ++ Q Sbjct: 364 NGYGLSDVATVIELSGQAR 382 >gi|242045640|ref|XP_002460691.1| hypothetical protein SORBIDRAFT_02g033250 [Sorghum bicolor] gi|241924068|gb|EER97212.1| hypothetical protein SORBIDRAFT_02g033250 [Sorghum bicolor] Length = 429 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 112/365 (30%), Gaps = 19/365 (5%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 + + + + + + +G+ YA+K N N A++ LA LG+G D S E+ L Sbjct: 60 VLNLSKVAELFSAWRRGLEGVPP--YYAVKCNPNPALLGALAALGAGFDCASPAEMDAVL 117 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A VPA+RI+++ K I A G+ +S E+ L + Sbjct: 118 ALGVPADRIIYANPCKPESHIQHAASVGVDLTTFDSVEEVDKLRRFHPRCR-----LLLR 172 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 +A + G K + + A + + Sbjct: 173 LKVPDAAGGALLDLGTKYGARQEEVAPLLRAAQSAGLAVSG--VAFHVGSAVSRVGVYDA 230 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCK 270 ++ +D+GGG A + + + Sbjct: 231 AVEAARAVFDAAAATRGMPPMRVLDIGGGFTAAATFQDACDVINSALARHFGDDLLPGLQ 290 Query: 271 IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV--- 327 +I EPGR+ L +V + + +D + + + Y V Sbjct: 291 VIGEPGRYFAETPFTLAARVFGKRTRGEVREYWIDDGLFGTLCCVHMENYVPRPVPVLRR 350 Query: 328 -------NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + + + + GP ++ D + + R GD L GAY S Sbjct: 351 RAAGDDDDEGDESETHPSTVFGPTLDSFDVVVKGYHLPELRIGDWLVFHDVGAYTTALSC 410 Query: 381 TYNSR 385 +N Sbjct: 411 DFNGF 415 >gi|118475146|ref|YP_891540.1| carboxynorspermidine decarboxylase [Campylobacter fetus subsp. fetus 82-40] gi|118414372|gb|ABK82792.1| carboxynorspermidine decarboxylase [Campylobacter fetus subsp. fetus 82-40] Length = 377 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 70/383 (18%), Positives = 124/383 (32%), Gaps = 31/383 (8%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP Y A+E N N D V ALK + ++ ++ +G E Sbjct: 8 TPAYVCEEAALENNLKILKNISDESGAKVLCALKGFAFSGAMELVSKYLNGATCSGLHEA 67 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + A + + + D+ + S + S ++ R+ S+ I Sbjct: 68 K---YAKYHGFKEIHTYSPAFSDDDIDEVLSISHHVVFNSFAQWNKF--RSKSIKSGKSI 122 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 RVNP+ +A+ + + + GI + Sbjct: 123 GLRVNPNTSASPTDMYNPCGEFSRLGITKDNFDFSNLDGV-----------EGLHFHALC 171 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ES +L+ +Q R+ ++ I+ GGG I +LI + Sbjct: 172 EESAKSLEFVLKAFEEQFRTIIPKMKWINFGGGHHITKSGYDINL----LINLIKSFKEK 227 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +I +EPG + G L++ V+ I + +KT +I A L Sbjct: 228 YGTQIFIEPGEAVGWRCGFLISSVLDIVTNGEKTCIIDASAECHMPDTIL----MPYRPS 283 Query: 327 VNPAGDRLHIHADIVGPICETGDFIA------LNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + G C GD + + + + GD + E Y V++ Sbjct: 284 IRGENKNGKFAYRFGGATCLAGDIVGAAAGEPIFKFDNEIKVGDKVIFEDQIHYTIVKNT 343 Query: 381 TYNSRLLIPEIMVN-GSQFHIIR 402 T+N L +M+N IIR Sbjct: 344 TFNGVKLPNLVMMNKNGDVKIIR 366 >gi|219520919|gb|AAI72060.1| Gm853 protein [Mus musculus] Length = 413 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 118/355 (33%), Gaps = 31/355 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F + + TF A YA+K NSN V+ LA LG+G D S+GEL + Sbjct: 52 FMVADLDVLVSRHRTFLQALPR--VQPFYAVKCNSNPWVLLVLAALGTGFDCASQGELEQ 109 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+F+ K + I A + G+ ++E EL L + I Sbjct: 110 VLGLGVAPSRIIFANPCKAVSHIQFAARCGVQLLTFDNEEELIKLARYHPRARLVLRI-- 167 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T ST KFG + L A L + G H+GS E Sbjct: 168 --------QTLDSQSTFPLHTKFGAHLEACGHLLQVARELGLA-VVGASFHVGSDCHTPE 218 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 S+ +A + + GH++ +D+GGG S+ + + + + Sbjct: 219 SYRQAIADCHRVFEMGCKAGHHMSLLDLGGGFPGVKGSEAKFEEVARVINTALAQYFPEE 278 Query: 267 LQCKIILEPGRFLVADVGILVTKVI------SIKKSADKTFVILDVAMNDFMRPTLYDAY 320 ++I EPGRF V +I + + + F Sbjct: 279 TGIEVIAEPGRFYAGSVCTAAVNIIVKKSSLDPGGHRKLAYYLNEGHYGVFRLFLRDPVP 338 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGD-FIALNRKIALPRPGDLLYIEKTGAY 374 + + + GP C+ D + ++ GAY Sbjct: 339 RIPIVVKEFPSEPPLFPCTLYGPTCDAYDRLFSTEVQLPEL---------DVGAY 384 >gi|215919028|ref|NP_819750.2| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA 493] gi|206583913|gb|AAO90264.2| ornithine decarboxylase [Coxiella burnetii RSA 493] Length = 400 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 67/376 (17%), Positives = 126/376 (33%), Gaps = 26/376 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P + + A+ + F FDG V YA+K N + VI+ + G D+ S E+ Sbjct: 21 PVFAFRPAALGRAVNYFCTQFDG---RVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEI 77 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R AE V + + G+ F+++ EL + + + Sbjct: 78 RIIKEYAPGAELYFMHPVKSPHAIREAYFEYGVRHFSLDCLEELHKILRHTENAK----- 132 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + + +KFGI +H+ L + Sbjct: 133 --DLCLHLRLAIPNTFAEFNLAEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPD 190 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ---- 262 A+++ + ++ + GG + + PP+ + Y IH Sbjct: 191 ------AYRIAIRMADKVINEAQVEIESFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAK 244 Query: 263 -YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +++ EPGR LVA+ ++ V K ++ D P + + Sbjct: 245 VAQRHPGIQLLCEPGRSLVAESTSVIVNVELRKDDILYINDGTYGSLFDAGIP--HFIFP 302 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSG 380 D + GP C++ D++ + + GD + I + GAYG S Sbjct: 303 VHLLRPKHTADVDLLPFSFYGPTCDSLDYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLST 362 Query: 381 TYNSR-LLIPEIMVNG 395 +N IMV+ Sbjct: 363 AFNGFKQREGVIMVSD 378 >gi|84686159|ref|ZP_01014054.1| Putative Ornithine decarboxylase [Maritimibacter alkaliphilus HTCC2654] gi|84665686|gb|EAQ12161.1| Putative Ornithine decarboxylase [Rhodobacterales bacterium HTCC2654] Length = 406 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 71/375 (18%), Positives = 125/375 (33%), Gaps = 21/375 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P +S + + F F G +V YA+KAN N VI TLA +G D+ S E+ Sbjct: 46 PVLYFSPETLAETARRFREGFPG---LVTYAVKANDNPGVIDTLAQVGVTSFDVASPAEI 102 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 P + ++ ++I EID A+ +G+ ++++ EL+ L + Sbjct: 103 ALVREVV-PFATLHYNNPVRSIPEIDAAVAAGVASYSIDGFGELEKL-----KGRVPQGV 156 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 V + KFG P L V Sbjct: 157 EVSVRLALPVKGAAYDF----GAKFGEPPEGCVDLLRAVVAAGYVPAMTFH----PGTQC 208 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY-HSDHRPPSSSDYASLIHQYFG 265 + A + + + R G + ++VGGG P ++ A + FG Sbjct: 209 EDPAAWA-RYIETCGEISRKAGVPLARLNVGGGFPSDRGTGARLEPIFAEIARAVAGAFG 267 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + Q ++ EPGR +VA+ L +V +I+ + + + Sbjct: 268 DTQPHLVCEPGRAMVAEAFSLAVRVKAIRGCGSLFLNDGIYGLLAEVPIMGPYGRMRVVA 327 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNS 384 + GP C++ D + + GD+L + GAY + +N Sbjct: 328 PDGTPRRGAPSPRVLYGPTCDSLDRLPGEVALPADLCEGDVLIFDGMGAYSTATNTRFNG 387 Query: 385 RLLIPEIMVNGSQFH 399 + V Sbjct: 388 YGAHEIVTVRRGGHR 402 >gi|83594465|ref|YP_428217.1| Orn/DAP/Arg decarboxylase 2 [Rhodospirillum rubrum ATCC 11170] gi|83577379|gb|ABC23930.1| Orn/DAP/Arg decarboxylase 2 [Rhodospirillum rubrum ATCC 11170] Length = 404 Score = 118 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 100/401 (24%), Positives = 152/401 (37%), Gaps = 16/401 (3%) Query: 4 FKYFEGSLHAENVSLEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 F L + LA TPFY Y A+ A + Y+LKAN Sbjct: 9 FGVSGSDLTIGGQRVSHLARIAGGTPFYAYDRGAVSARIAALRAALP-AGMAIRYSLKAN 67 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 A++ +A L G D S GELR LA + + +G GK+ +I L+ + Sbjct: 68 PMAALLAHMAPLVDGFDAASAGELRAGLAVGMAPAALSIAGPGKSPADI-LSAVAAGALV 126 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 VES +E+ + Q + G + + RVNP+ G FGI Q+ + Sbjct: 127 VVESLAEVGRVAQAGNASGLRPRVLVRVNPEAEIQGAGLRMGGGA-RPFGIDADQVPGVL 185 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A A + G+ GSQ E +AF ++ L + I +GGG GI Sbjct: 186 A-AIAAHDLDYQGLHCFWGSQALDAERIARAFAVVGQTLLDLAGPRP-PRQIVIGGGFGI 243 Query: 243 AYHSDHRPPSSSDYASLIHQY-----FGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 Y P + + + + + LE GRFLV + G+ V + K+S Sbjct: 244 PYTPTSAPLDLARAGAAVAETAGLLGDHLPGVSLGLELGRFLVGEAGVYVCAIRESKRSR 303 Query: 298 DKTFVILDVAMNDFM----RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 F++ D ++ I G+ + A I G +C D A Sbjct: 304 GNLFLVTDGGLHHNQAATGNFGQVVRRPYPLVIATRMGEPVSERATITGCLCTPLDVFAE 363 Query: 354 NRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMV 393 I GDL+ I ++GAYGA S + E++V Sbjct: 364 ALAIPAAAEGDLVAIFQSGAYGASASPSAFLGHPPAVELLV 404 >gi|212212809|ref|YP_002303745.1| ornithine decarboxylase [Coxiella burnetii CbuG_Q212] gi|212011219|gb|ACJ18600.1| ornithine decarboxylase [Coxiella burnetii CbuG_Q212] Length = 400 Score = 118 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 65/376 (17%), Positives = 125/376 (33%), Gaps = 26/376 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P + + A+ + F F V YA+K N + VI+ + G D+ S E+ Sbjct: 21 PVFAFRPAALGRAVNYFCTQF---GGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEI 77 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R AE V + + G+ F+++ EL+ + + + Sbjct: 78 RIIKEYAPGAELYFMHPVKSPHAIREAYFEYGVRHFSLDCLEELRKILRHTENAK----- 132 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + + +KFGI +H+ L + Sbjct: 133 --DLCLHLRLAIPNTFAEFNLAEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPD 190 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ---- 262 A+++ + ++ + GG + + PP+ + Y IH Sbjct: 191 ------AYRIAIRMADKVINEAQVEIEFFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAK 244 Query: 263 -YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +++ EPGR LVA+ ++ V K ++ D P + + Sbjct: 245 VAQRHPGIQLLCEPGRSLVAESTSVIVNVELRKDDILYINDGTYGSLFDAGIP--HFIFP 302 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSG 380 D + GP C++ D++ + + GD + I + GAYG S Sbjct: 303 VHLLRPKHTADVDLLPFSFYGPTCDSLDYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLST 362 Query: 381 TYNSR-LLIPEIMVNG 395 +N IMV+ Sbjct: 363 AFNGFKQREGVIMVSD 378 >gi|148925677|ref|ZP_01809365.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni CG8486] gi|145845687|gb|EDK22778.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni CG8486] Length = 382 Score = 118 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 49/397 (12%), Positives = 119/397 (29%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN ++ + V ALK + +K + G Sbjct: 4 EKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 64 LWEAK---FAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSL 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + + + Sbjct: 121 GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE---------- 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ ++ ++ ++ GGG +H + +L Sbjct: 171 -----ESADALEAVLKAFEEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLIALCKN 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV V+ I ++ + ++ + + E Sbjct: 222 FSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + A +D+ G C GD + + GD + Sbjct: 282 VLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L ++++ ++ +IR ++++ Sbjct: 342 YTIVKNTTFNGIRLPNLMLLDRKNELQMIRE-FSYKD 377 >gi|160872358|ref|ZP_02062490.1| decarboxylase, pyridoxal-dependent [Rickettsiella grylli] gi|159121157|gb|EDP46495.1| decarboxylase, pyridoxal-dependent [Rickettsiella grylli] Length = 395 Score = 118 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 74/381 (19%), Positives = 134/381 (35%), Gaps = 29/381 (7%) Query: 16 VSLEKLAHVVQT----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 ++L+ +A VV + P + + +E F F G + YA+K N + VI L Sbjct: 1 MNLQTIASVVDSQPPQPVFVFRPNIMECAINYFRTRFQG---RILYAVKTNPERQVIHLL 57 Query: 72 AHLGSG-LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 H G D+ S E+R + A V + + G+ F ++S EL Sbjct: 58 HHQGIHDFDVASYEEIRMIKSILPDAGLYFMHPVKSSFAIQEAYFNYGVRHFALDSLDEL 117 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 K + + + P+ A F + L L Sbjct: 118 KKIVRYTNNAKDLCLHLRLAIPNTFAE-------------FNLSAKFGIHLDEAPELLKK 164 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 V+ + I + A+++ L +L GG + + P Sbjct: 165 VRKVAYKLGITFHVGSQCMHPDAYRIAIRLANKLIGQSKIAIEYFDVGGGFPSIYPGMTP 224 Query: 251 PSSSDYASLIHQYFG-----NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 P Y ++IH+ F +++ EPGR LVA+ ++ +V S KK+ Sbjct: 225 PPLEIYFNVIHEEFKEISKKFPTIELLCEPGRCLVAESTSVIVRVESRKKNQLYINDGTY 284 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGD 364 ++ D P + + + ++ I GP C+ D++ + + G+ Sbjct: 285 GSLFDAGIP--HFIFPVRLIKKSYRKNKDLIPYSFYGPTCDCLDYMQGPFYLPSDIKEGN 342 Query: 365 LLYIEKTGAYGAVQSGTYNSR 385 + I + GAYG S +N Sbjct: 343 YIEIGQVGAYGRTLSTGFNGF 363 >gi|288799949|ref|ZP_06405408.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 299 str. F0039] gi|288333197|gb|EFC71676.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 299 str. F0039] Length = 390 Score = 118 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 65/404 (16%), Positives = 123/404 (30%), Gaps = 29/404 (7%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 + ++ +++ P Y + +N SN D + A KA + Sbjct: 3 VDRITFQEIKE----PTYILEEQLLRRNLTLISNVAQKADVEIILAFKAYALWKTFPIFK 58 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 + S E + EID S S+ + Sbjct: 59 EYINATTASSLSEAKLGYQEF--GSLTHTFSPAYIDYEIDEIASC-SSHLTFNSLSQYER 115 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + RA+S+ + I RVNP+ + + +FG+ ++ K Sbjct: 116 FSGRAISVQPEISIGLRVNPEYSEVGTDLYNPCAPGTRFGVSADKLPK-----------K 164 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + + + L+ + ++ ++ I+ GGG + Sbjct: 165 LPSLLEGFHCHCHCESGSDVFVRTLKHIEEKFSPWFSQLKWINFGGGHLMTRSDYDVELL 224 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 S +Y +ILEPG G LV V+ I + ILDV+ M Sbjct: 225 ISTLQEFKKRYPHLH---VILEPGSAFAWQTGPLVAHVVDIVEDKGYQTAILDVSFTCHM 281 Query: 313 RPTLYDAYHEINYIVNPAGDRL------HIHADIVGPICETGDFIALNRKIALPRPGDLL 366 L Y + A + G C +GDF+ + G+ + Sbjct: 282 PDCLEMPYMPVVRNAVIAEEEEAQPEDYRYRYRFGGNSCLSGDFMGDWIFDHELQVGENI 341 Query: 367 YIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 E Y V++ +N ++ + I+R T+++ Sbjct: 342 IFEDMLHYTTVKTNMFNGITHPSIALLKTNGELEILRK-YTYKD 384 >gi|118101782|ref|XP_425787.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 458 Score = 118 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 118/369 (31%), Gaps = 31/369 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K +L F A + + +K NS+ VI+ LA LG+G ++ E+ Sbjct: 39 FFVADLGDIVKKHLHFLKALPRVKP--YFPVKCNSSGGVIRLLAELGAGFACANKTEIAE 96 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VPA++I +S K + ++ EL + + I Sbjct: 97 VQSIGVPADKIFYSSPCKXXXXXXXXXXXXVQLMTFDNLVELSKVARSHPQARMLLGI-- 154 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + FG + L A ++ G+ H+G + + Sbjct: 155 ---------AADSSPSAHPSMTFGATLKSCRCLLESAKEQDV-EVVGISFHLGRHSLEPQ 204 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 F +A + G+ + +D+GGG + + + + + Sbjct: 205 VFAQAVAEAQLAFDMGAELGYRMHLLDIGGGFPGTEDTRAQFEEIAAVINSALDMYFPEG 264 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSA---------------DKTFVILDVAMNDF 311 +II PGR+ V + S + + + + F Sbjct: 265 CGVEIIATPGRYYVTSAFTFAASITSKEDVPVEQPGSDGEESGSKRSFVYHLSNGIYGTF 324 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P ++L + + GP+ D I + ++ + GD L + Sbjct: 325 SCVLFDGPCPKPLLHKKPCSEQLLCSSSLRGPLGHAEDQITDDVELPELQDGDWLIFQDM 384 Query: 372 GAYGAVQSG 380 GAY S Sbjct: 385 GAYSIATSS 393 >gi|311063677|ref|YP_003970402.1| diaminopimelate decarboxylase [Bifidobacterium bifidum PRL2010] gi|310865996|gb|ADP35365.1| LysA Diaminopimelate decarboxylase [Bifidobacterium bifidum PRL2010] Length = 542 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 23/255 (9%) Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLG 241 + +++ G+ HIGS I ++F +A K + L + ++ + + +D+GGG Sbjct: 288 DILTRSDELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYS 347 Query: 242 IAYHSDHRPPSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 +AY + I++ G I EPGR++VA G+ + +V Sbjct: 348 VAYTDGEDSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVTLYRVGTIK 407 Query: 291 ---------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + ++ +V +D M+D +RP LY A + + N G + +V Sbjct: 408 PVHLSDAKDKTGNPIDERVYVSVDGGMSDNIRPALYGADY-TVRLANRRGSDESMLVRVV 466 Query: 342 GPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHI 400 G CE+GD I ++ R GD+L + TGAYG + YN L+ + V+ + H+ Sbjct: 467 GMHCESGDIIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSEAGAHV 526 Query: 401 IRPRMTFQELIELDS 415 + R T +L++LD Sbjct: 527 MIRRQTIDDLLDLDQ 541 Score = 99.5 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 EG+L + E L +P Y T + F ++AF T V +A KA Sbjct: 27 EGALTFHGRTAESLLDEFGSPLYLIDTDEVSARARYFVRAAADAFTNSTTHVSFAGKAFL 86 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ V++ + G +D S GE+R ALAA VP R+V G K+ EI+LA++ G Sbjct: 87 SKEVVRLVIDAGMLVDTCSMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFAKIV 146 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 V+ E + A LGK+A + RV I+A H+ IST ++ KFG+P+ Sbjct: 147 VDEPGEPARIAAIARRLGKRARVMLRVTAGIHAGGHEYISTAHEDQKFGVPL 198 >gi|310286781|ref|YP_003938039.1| diaminopimelate decarboxylase [Bifidobacterium bifidum S17] gi|309250717|gb|ADO52465.1| diaminopimelate decarboxylase [Bifidobacterium bifidum S17] Length = 548 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 23/255 (9%) Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLG 241 + +++ G+ HIGS I ++F +A K + L + ++ + + +D+GGG Sbjct: 294 DILTRSDELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYS 353 Query: 242 IAYHSDHRPPSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 +AY + I++ G I EPGR++VA G+ + +V Sbjct: 354 VAYTDGEDSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVTLYRVGTIK 413 Query: 291 ---------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + ++ +V +D M+D +RP LY A + + N G + +V Sbjct: 414 PVHLSDAKDKTGNPIDERVYVSVDGGMSDNIRPALYGADY-TVRLANRRGSDESMLVRVV 472 Query: 342 GPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHI 400 G CE+GD I ++ R GD+L + TGAYG + YN L+ + V+ + H+ Sbjct: 473 GMHCESGDIIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSEAGAHV 532 Query: 401 IRPRMTFQELIELDS 415 + R T +L++LD Sbjct: 533 MIRRQTIDDLLDLDQ 547 Score = 99.5 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 EG+L + E L +P Y T + F ++AF T V +A KA Sbjct: 33 EGALTFHGRTAESLLDEFGSPLYLIDTDEVSARARYFVRAAADAFTNSTTHVSFAGKAFL 92 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ V++ + G +D S GE+R LAA VP R+V G K+ EI+LA++ G Sbjct: 93 SKEVVRLVTDAGMLVDTCSMGEMRIVLAAGVPGRRLVLHGNNKSDAEIELAIEQGFAKIV 152 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 V+ E + A LGK+A + RV I+A H+ IST ++ KFG+P+ Sbjct: 153 VDEPDEPARIAAIARRLGKRARVMLRVTAGIHAGGHEYISTAHEDQKFGVPL 204 >gi|325971325|ref|YP_004247516.1| carboxynorspermidine decarboxylase [Spirochaeta sp. Buddy] gi|324026563|gb|ADY13322.1| carboxynorspermidine decarboxylase [Spirochaeta sp. Buddy] Length = 371 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 73/387 (18%), Positives = 130/387 (33%), Gaps = 27/387 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP + A++KN D + +ALK + +V LA G I S E Sbjct: 10 TPAFVLEYEALQKNLALIKQLQDQVPVKFLFALKGFAMHSVFPELAASACGATISSLNEA 69 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A E ++ V + + +A + FN +E E T +A Sbjct: 70 LLASPYFS--EVHAYAPVYQDREFETIARIAKHITFNSLNEYEKHT------KDCPRASK 121 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP +A + + G+ + +L S L + H Sbjct: 122 GLRINPLYSAVETELYDPCAIGSRLGVLPQALPTLPEGLSGLHSHNLCESTAH------- 174 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + L + + +I +++GGG + + +S + Sbjct: 175 -----DLEQTLVSIEKHYGHLLPSISWLNLGGGHLVTKKGYDLELFKAVLSSFC---MRH 226 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG V + G L T+++ I ++ T ++LD + M L Y Sbjct: 227 PHIQLYLEPGAAFVWETGYLATRILDIVQNQGITTLMLDTSFATHMPDCLEMPYAPQVVG 286 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + + G C GD++ R P+ GD L + Y V++ +N Sbjct: 287 AEIVQEGG---YRLGGCSCLAGDWVGSYRFKKQPKVGDTLLLCDMMHYTMVKTTMFNGIA 343 Query: 387 LIPEIMVNGSQFHIIRPRMTFQELIEL 413 L MV + I +F + Sbjct: 344 LADIGMVRDG-LYQIVKTFSFDDYQRR 369 >gi|313159328|gb|EFR58692.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Alistipes sp. HGB5] Length = 464 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 54/446 (12%), Positives = 123/446 (27%), Gaps = 38/446 (8%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV------ 55 F + L+ ++ L +L TP I + F+ V Sbjct: 18 DEFSVEDNELNFHDIPLMELIKQYGTPLKITYLPKISQQINRAKRMFNVAMAKVDYKGSY 77 Query: 56 --CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPV----PAERIVFSGVGKTID 109 CY K++ V++ L+ S ++ A +R + K Sbjct: 78 NYCYCTKSSHFSFVLEEAMKNDIHLETSSAYDIHIINALYDSGIIDKDRYIICNGFKRPQ 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 ++ Q F + + T + Sbjct: 138 YVENIAQLVNDGFVNTIPVLDNKEELELFEDSFTKKCKVGIRIACEEEPKFEFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 ++ I A ++ + I + I + ++ +L++ Sbjct: 198 RYNDII---DFYKAKLKNSKKFQLKMLHFFINTGIKDTAYYWNELSKCINVYCELKAICP 254 Query: 230 NIQHIDVGGGL------GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADV 283 + +++GGG Y ++ I Q + I E G F V + Sbjct: 255 ELDSLNIGGGFPIKNSLNFEYDYEYLTEEIIAQIKNICQRNDTEEPNIFTEFGSFTVGES 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G + +++ K+ D+ + + P + + D+ + + G Sbjct: 315 GASLYSIVNQKQQNDRENWYMIDSSFITTLPDTWGINQRYIMLAVNNWDKEYQRVLLGGL 374 Query: 344 ICETGDFI-----ALNRKIALPRPG--DLLYIEKTGAYGAVQSG----TYNSRLLIPEIM 392 C++ DF + PG + TGAY G + I+ Sbjct: 375 TCDSEDFYNAESHTNAIFLPKLEPGNTQYIGFFHTGAYQESLGGFGGIQHCLIPAPKHII 434 Query: 393 VNGSQF------HIIRPRMTFQELIE 412 ++ + + +++ ++ Sbjct: 435 IDRDKSDNEYYTRLFAKEQSYRSMLR 460 >gi|320324002|gb|EFW80085.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. glycinea str. B076] Length = 406 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 79/373 (21%), Positives = 133/373 (35%), Gaps = 21/373 (5%) Query: 18 LEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +LA T FY I +N FS F G V YA+KAN + V++ L+ G Sbjct: 40 LAQLADDTNDT-FYTVDPRWITRNAQQFSGCFPG---TVLYAMKANPLEQVLEALSQGGI 95 Query: 77 -GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 D+ S E++ A + + + V + + G+ F ++SE EL L Sbjct: 96 NHFDVASLAEVQTVHNTLPTAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRD 155 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R A + + P+ ++ AS+ G Sbjct: 156 VLPERDSTISLFVRY-----APSESTAVYDLRGKFGASPVLATQLVHQVASSTDWS--LG 208 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-- 253 + H+GSQ + + A D +R +++H+D+GGG Y + Sbjct: 209 LSFHVGSQAIEDGPWLAALN---DADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLV 265 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 I +I E GR LV L +V+S ++ + + + + Sbjct: 266 GRVCDHIQTSPTLKDLNLICEAGRGLVYGGMSLFARVLSRREQSVFCGAGIFGGLLSAQQ 325 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 + A + P +I GP C++ D +A +A R D L + TG Sbjct: 326 WLQFPA--RVWRDGTPYTGAAENTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTG 383 Query: 373 AYGAVQSGTYNSR 385 AY +N Sbjct: 384 AYSVSLRTPFNGF 396 >gi|71734011|ref|YP_274894.1| ornithine decarboxylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554564|gb|AAZ33775.1| ornithine decarboxylase, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 371 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 79/373 (21%), Positives = 133/373 (35%), Gaps = 21/373 (5%) Query: 18 LEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +LA T FY I +N FS F G V YA+KAN + V++ L+ G Sbjct: 5 LAQLADDTNDT-FYTVDPRWITRNAQQFSGCFPG---TVLYAMKANPLEQVLEALSQGGI 60 Query: 77 -GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 D+ S E++ A + + + V + + G+ F ++SE EL L Sbjct: 61 NHFDVASLAEVQTVHNTLPTAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRD 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R A + + P+ ++ AS+ G Sbjct: 121 VLPERDSTISLFVRY-----APSESTAVYDLRGKFGASPVLATQLVHQVASSTDWS--LG 173 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-- 253 + H+GSQ + + A D +R +++H+D+GGG Y + Sbjct: 174 LSFHVGSQAIEDGPWLAALN---DADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLV 230 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 I +I E GR LV L +V+S ++ + + + + Sbjct: 231 GRVCDHIQTSPTLKDLNLICEAGRGLVYGGMSLFARVLSRREQSVFCGAGIFGGLLSAQQ 290 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 + A + P +I GP C++ D +A +A R D L + TG Sbjct: 291 WLQFPA--RVWRDGTPYTGAAENTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTG 348 Query: 373 AYGAVQSGTYNSR 385 AY +N Sbjct: 349 AYSVSLRTPFNGF 361 >gi|254483006|ref|ZP_05096241.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [marine gamma proteobacterium HTCC2148] gi|214036691|gb|EEB77363.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [marine gamma proteobacterium HTCC2148] Length = 399 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 73/362 (20%), Positives = 123/362 (33%), Gaps = 19/362 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P Y + A++ F F G V YA+KAN V++TLA G D+ S E+ Sbjct: 36 PLYLFCPDALQTRAKRFLTHFPG---TVSYAVKANPEVRVLETLAATGLQNFDVASLDEV 92 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 RR + + + + L+ G+ F ++ SEL+ +++ Sbjct: 93 RRVSEYCPGSILHYNNPIKAEEAVAESYLRYGVRSFALDEMSELEKIHRCTGGDP----- 147 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 V + + KFG L + G Q Sbjct: 148 --DVTYTVRFKLEHAGAAYDFGSKFGATEDYAVELLQAIEKIGGRPALTFHPGSQCTDPQ 205 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY--ASLIHQYF 264 + + L ++ L G I+VGGG Y P + S + Sbjct: 206 MY-----ERYLEAASRILSRAGVKPAFINVGGGFPEYYQDTSIPALEEYFSVISSSMDKY 260 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + +I EPGR +VA L+ +VI ++ FV V + + Sbjct: 261 FDTDIPLICEPGRGMVASSVSLLARVIHVRDCGKSVFVNDGVYGGMQEQSLVDICLPVRA 320 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYN 383 + A + GP C+ D ++ + + R GD + GAYG+ + T+N Sbjct: 321 WREGEALIATESDYHVFGPTCDPVDRLSKSTALPKELRTGDYIEFGLLGAYGSATTTTFN 380 Query: 384 SR 385 Sbjct: 381 GF 382 >gi|187736145|ref|YP_001878257.1| carboxynorspermidine decarboxylase [Akkermansia muciniphila ATCC BAA-835] gi|187426197|gb|ACD05476.1| carboxynorspermidine decarboxylase [Akkermansia muciniphila ATCC BAA-835] Length = 400 Score = 117 bits (293), Expect = 4e-24, Method: Composition-based stats. Identities = 63/410 (15%), Positives = 116/410 (28%), Gaps = 39/410 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + S A+E+N L + D + ALK S + L+ G E R Sbjct: 3 AFIISLPALERNALILRDVADAAGCRIALALKGFSCWPCFEALSPWLDGCCASGLWEARL 62 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A + V + E L + S ++ + + + Sbjct: 63 ---ARRRFGKHVLTYSPGHAPEEIAELAEISSHLDFNSLTQWSRFREEVMRHPRFVSGEL 119 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + +N + G + + A + D + Sbjct: 120 KCGLRVNPQCSTGHTPIYDPCAPGSRLGVTPDMMQGADLSGISGLH-FHTLCEQGADDLA 178 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 +A + + I +++GGG I R A+LI + Sbjct: 179 VTMEAVERHFGHL----LSRPEISWLNMGGGHWITKPDYDRKL----LAALIRRIRERYG 230 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 ++ LEPG G+L +V+ + + ILDV+ + M TL Y + + Sbjct: 231 VEVWLEPGEAAAIHTGVLRCRVLDLFSAEGVNHAILDVSASAHMPDTLEMPYRPDVFQIA 290 Query: 329 PAGD-----------------------RLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 + P C GD + GD Sbjct: 291 GDASLRSAQQPAVRLEGESYALAGKAGEKAYTYRLGAPTCLAGDRLGDYSFAEPLAVGDE 350 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMV--NGSQFHIIRPRMTFQELIEL 413 L + Y V++ +N P+I V +R R ++++ Sbjct: 351 LVFDDMAHYTMVKTTFFNGV-RHPDIAVQRKDGSVETVR-RFSYEDFEAR 398 >gi|63002636|dbj|BAD97830.1| ornithine decarboxylase [Prunus persica] Length = 330 Score = 117 bits (293), Expect = 4e-24, Method: Composition-based stats. Identities = 80/346 (23%), Positives = 131/346 (37%), Gaps = 42/346 (12%) Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 YA+K N + V++ LA +G+G D S+ E+ L V RI+++ KT + A Sbjct: 1 FYAVKCNPDPFVLRLLAAMGTGFDCASKAEIDMVLRLGVDPSRIIYAQPCKTKSYVRYAS 60 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 + G+ ++ EL + + I T S + KFG + Sbjct: 61 KQGVRQMTFDNSDELYKIKELFPDAELYLRIL----------TDDSASLCRLSLKFGASL 110 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 L A A L + + GV H+GS +F KA + R + Q + G++++ +D Sbjct: 111 DDTGDLLALARKLD-LNVVGVAFHVGSGASDPAAFLKAVRDTRFVFDQANALGYDLKTLD 169 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 VGGG D S + ++I EPGR+ V+ + VI+ + Sbjct: 170 VGGGFVSETFDDMAAVLSVAL-----DEYFPPSVRVIGEPGRYYVSSAFTIACNVIARRS 224 Query: 296 SADK------TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH------------ 337 DK + L+ + ++D H I ++ D L + Sbjct: 225 VEDKALGVNSYMLYLNDGVYGNFSSIMFDHQHPIPRVLKAQNDTLATYNNHSDAVAAYDA 284 Query: 338 -------ADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYG 375 I GP C+ D I+ + A GD LY GAY Sbjct: 285 ATKLPLEYSIWGPTCDGIDCISESWTCAQTLDVGDWLYFPNMGAYT 330 >gi|205356645|ref|ZP_03223407.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni CG8421] gi|205345502|gb|EDZ32143.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni CG8421] Length = 382 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 50/397 (12%), Positives = 119/397 (29%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN ++ + V ALK + +K + G Sbjct: 4 EKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 64 LWEAK---FAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSL 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + + + Sbjct: 121 GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE---------- 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ ++ ++ ++ GGG +H + +L Sbjct: 171 -----ESADALEAVLKAFEEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLIALCKN 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV V+ I ++ + ++ + + E Sbjct: 222 FSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + A +D+ G C GD + + GD + Sbjct: 282 VLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L +++N ++ +IR ++++ Sbjct: 342 YTIVKNTTFNGIRLPNLMLLNAKNELQMIRE-FSYKD 377 >gi|283956889|ref|ZP_06374362.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni 1336] gi|283791615|gb|EFC30411.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni 1336] Length = 382 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 50/397 (12%), Positives = 119/397 (29%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN ++ + V ALK + +K + G Sbjct: 4 EKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 64 LWEAK---FAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSL 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + + + Sbjct: 121 GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE---------- 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ ++ ++ ++ GGG +H + +L Sbjct: 171 -----ESADALEAVLKVFEEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLIALCKN 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV V+ I ++ + ++ + + E Sbjct: 222 FSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + A +D+ G C GD + + GD + Sbjct: 282 VLNARILATRENEKISDLKENEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L +++N ++ +IR ++++ Sbjct: 342 YTIVKNTTFNGIRLPNLMLLNAKNELQMIRE-FSYKD 377 >gi|319956673|ref|YP_004167936.1| carboxynorspermidine decarboxylase [Nitratifractor salsuginis DSM 16511] gi|319419077|gb|ADV46187.1| carboxynorspermidine decarboxylase [Nitratifractor salsuginis DSM 16511] Length = 389 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 55/393 (13%), Positives = 114/393 (29%), Gaps = 21/393 (5%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++ + +P + +E N S + + ALK + + G Sbjct: 12 SEILSKLPSPCWVLEEHLLEYNLQILSAIKEATGVKILLALKGYALWHSFPLVREYLDGC 71 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 S L A A + V + +E + + S ++L+ A Sbjct: 72 -CASG--LCEARLAAEEFGKEVHTYSPAFKEEEIDEIARLSHHLVFNSPAQLQRFGAAAK 128 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + RVNP+ + + + + G A L + ++ Sbjct: 129 AANPALSLGLRVNPEYSEAPVELYNPCGAYSRLGT----------LAGDLDEASVDQIEG 178 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + + ++ +L ++ ++ ++ GGG I A Sbjct: 179 LHFHALCEQDASA-LEGVLGVFEEKFGRWLPQLKWVNFGGGHHITRSDYD---REKLIAL 234 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 L + ++ LEPG + + G LV V+ I + ++ A Sbjct: 235 LKDFRRRHPHLELYLEPGEAVGWETGPLVATVLDIVHNGIDIAILDTSAEAHMP--DTII 292 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + + G C GD + + GD + E Y V+ Sbjct: 293 MPYRAQVRGAGKAGEKSYTYRLGGNTCLAGDIMGDYSFDRPLKIGDRILFEDQMHYTMVK 352 Query: 379 SGTYNSRLLIPEI-MVNGSQFHIIRPRMTFQEL 410 + T+N L + I R + + Sbjct: 353 ATTFNGIPLPSIATLHRDGSLS-IDRRFGYNDF 384 >gi|163869358|ref|YP_001610614.1| carboxynorspermidine decarboxylase [Bartonella tribocorum CIP 105476] gi|161019061|emb|CAK02619.1| carboxynorspermidine decarboxylase [Bartonella tribocorum CIP 105476] Length = 366 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 54/383 (14%), Positives = 114/383 (29%), Gaps = 27/383 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + + KN T S + V ALK + +V ++ G S EL Sbjct: 5 TPYYLIDKSKLIKNMQTISRLREMSGAKVLLALKCFATWSVFDLMSEFMDGTTSSSLYEL 64 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R E +S + + + + QR K Sbjct: 65 RLGKE-KFGKETHAYSVAWADHEIDE------ACDYADKIIFNSIQQLQRFSDATKTIQR 117 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP I+A+ + + + G + ++ + + Sbjct: 118 GLRLNPGISASHFDLANPSRPFSRLGETNQSAIKEV----------LPLINGLMIHNNCE 167 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F+ ++L + ++ + I +GGG+ H +A + + Sbjct: 168 NADFNLFNQMLGAMEEKFSELFSAVDWISLGGGI----HFTAENYPLEAFAERLKHFSKT 223 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + LEPG + L V+ + ++ + +Y Sbjct: 224 HGVTLFLEPGEAAITKSTTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIY------REN 277 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 ++ I G C GD + + GD L + Y V+ +N Sbjct: 278 AKLEPNQGEHEIMICGKSCLAGDIFGTFQFEKPLKIGDRLSFQDAAGYTMVKKNWFNGVT 337 Query: 387 LIPEIMVNGSQFHIIRPRMTFQE 409 + ++ ++ + ++ + Sbjct: 338 MPAIVLKECDGTLTLQRQFSYND 360 >gi|163745757|ref|ZP_02153117.1| carboxynorspermidine decarboxylase [Oceanibulbus indolifex HEL-45] gi|161382575|gb|EDQ06984.1| carboxynorspermidine decarboxylase [Oceanibulbus indolifex HEL-45] Length = 364 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 114/387 (29%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y + N + ALK + +V ++ G S E Sbjct: 2 QTPYYLIDKANLRDNMEKIARLRALSGARCLLALKCFATWSVFDFMSEYMDGSTSSSLYE 61 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R P E +S + ++ + FN + + G Sbjct: 62 VRLGAE-KFPGETHAYSVAYADHEIDEVLGHADKIIFNSIGQLDKFDTQSSGHIRG---- 116 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R NP ++ + + + G + A + + Sbjct: 117 --LRANPGVSTSEFDLADPARPFSRLGEHDPEEIDAVAD----------RISGLMFHNNC 164 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + +SF + ++L + + + H + I +GGG+ H D A + + Sbjct: 165 ENDSFERFDEMLTLIEDRFGAVLHKMDWISLGGGI----HFTGADYPLDDLALRLKAFAE 220 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 221 AFGVQVYLEPGEAAITGAATLEVTVLDTMHNGKNLAIVDSSIEAHMLDLLIY------RE 274 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A + I G C GD R A + GD L + Y V+ +N Sbjct: 275 PAKIAPNTGDHEWMICGKSCLAGDIFGEFRFDAPLKAGDRLSFQDAAGYTMVKKNWFNGV 334 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I + ++R + + Sbjct: 335 KMPS-IAIRELDGTTRMVRD-FDYDDF 359 >gi|295110384|emb|CBL24337.1| Diaminopimelate decarboxylase [Ruminococcus obeum A2-162] Length = 399 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 80/380 (21%), Positives = 141/380 (37%), Gaps = 25/380 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP Y + +++ G +CYA+KAN +IK + + S L++ S Sbjct: 14 EQIPTPAYVFDLDEMKEFAEKVKRCLTG-KAEICYAMKANP--FLIKPMLEIVSSLEVCS 70 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GE R A +P +IV SGV K D+A Y + E + Sbjct: 71 PGEFRICERAGIPMGKIVLSGVYKNP--DDIAYMLDRYGNSGTYTVESLQHLKVLNDTAV 128 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + I V + + ++FGI +I + + G++I G+ + G+ Sbjct: 129 RHGIILSVLIRVTSG-----------NQFGIDEAEIRKIISEREKYAGIEIEGIQFYSGT 177 Query: 203 QIDQ-IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 Q + + L + NG I+ ++ G G + Y + + D Sbjct: 178 QKRNLSQMQEELEHLDAFIRDLEDINGMEIRTLEYGPGFFVPYFVKDKSERTEDLLEEFK 237 Query: 262 QYFG--NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + KI+LE GRFL A G +T ++ +K + ++ + ILD +N A Sbjct: 238 KILEALQFHGKIVLEMGRFLAASCGYYITSIVDMKVNKEQPYAILDGGINHLNYYGQAMA 297 Query: 320 YHEINY-----IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 + + + ++ G +C D I + P D+L E+ GAY Sbjct: 298 MKRPYCSQLNSKGSEKTEGKEENWNLCGALCTVSDVIVKQFPLRNPEICDILVFERVGAY 357 Query: 375 GAVQS-GTYNSRLLIPEIMV 393 + + SR L Sbjct: 358 SVTEGIYLFLSRPLPKIYFW 377 >gi|86151988|ref|ZP_01070201.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 260.94] gi|315124941|ref|YP_004066945.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841096|gb|EAQ58345.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 260.94] gi|315018663|gb|ADT66756.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 382 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 51/397 (12%), Positives = 119/397 (29%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN ++ + V ALK + +K + G Sbjct: 4 EKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 64 LWEAK---FAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSL 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + S + Sbjct: 121 GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTIEGLHFHALCE---------- 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ ++ ++ ++ GGG +H + +L Sbjct: 171 -----ESADALEAVLKAFEEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLIALCKN 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV V+ I ++ + ++ + + E Sbjct: 222 FSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + A +D+ G C GD + + GD + Sbjct: 282 VLNARILATRENEKISDLKENEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L +++N ++ +IR ++++ Sbjct: 342 YTIVKNTTFNGVRLPNLMLLNAKNELQMIRE-FSYKD 377 >gi|313139481|ref|ZP_07801674.1| diaminopimelate decarboxylase [Bifidobacterium bifidum NCIMB 41171] gi|313131991|gb|EFR49608.1| diaminopimelate decarboxylase [Bifidobacterium bifidum NCIMB 41171] Length = 519 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 23/255 (9%) Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLG 241 + +++ G+ HIGS I ++F +A K + L + ++ + + +D+GGG Sbjct: 265 DILTRSDELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYS 324 Query: 242 IAYHSDHRPPSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 +AY + I++ G I EPGR++VA G+ + +V Sbjct: 325 VAYTDGEDSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVTLYRVGTIK 384 Query: 291 ---------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + ++ +V +D M+D +RP LY A + + N G + +V Sbjct: 385 PVHLSDAKDKTGNPIDERVYVSVDGGMSDNIRPALYGADY-TVRLANRRGSDESMLVRVV 443 Query: 342 GPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHI 400 G CE+GD I ++ R GD+L + TGAYG + YN L+ + V + H+ Sbjct: 444 GMHCESGDIIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAVTEAGAHV 503 Query: 401 IRPRMTFQELIELDS 415 + R T +L++LD Sbjct: 504 MIRRQTIDDLLDLDQ 518 Score = 99.9 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 59/179 (32%), Positives = 89/179 (49%), Gaps = 8/179 (4%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVC 56 M+A EG+L + E L +P Y T + F ++AF T V Sbjct: 1 MNA----EGALTFHGRTAESLLDEFGSPLYLIDTDEVSARARYFVRAAADAFTNSTTHVS 56 Query: 57 YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 +A KA ++ V++ + G +D S GE+R ALAA VP R+V G K+ EI+LA++ Sbjct: 57 FAGKAFLSKEVVRLVTDAGMLVDTCSMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIE 116 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 G V+ E + A LGK+A + RV I+A H+ IST ++ KFG+P+ Sbjct: 117 QGFAKIVVDEPDEPSRIAAIARRLGKRARVMLRVTAGIHAGGHEYISTAHEDQKFGVPL 175 >gi|224282335|ref|ZP_03645657.1| diaminopimelate decarboxylase [Bifidobacterium bifidum NCIMB 41171] Length = 537 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 23/255 (9%) Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLG 241 + +++ G+ HIGS I ++F +A K + L + ++ + + +D+GGG Sbjct: 283 DILTRSDELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYS 342 Query: 242 IAYHSDHRPPSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 +AY + I++ G I EPGR++VA G+ + +V Sbjct: 343 VAYTDGEDSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVTLYRVGTIK 402 Query: 291 ---------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + ++ +V +D M+D +RP LY A + + N G + +V Sbjct: 403 PVHLSDAKDKTGNPIDERVYVSVDGGMSDNIRPALYGADY-TVRLANRRGSDESMLVRVV 461 Query: 342 GPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHI 400 G CE+GD I ++ R GD+L + TGAYG + YN L+ + V + H+ Sbjct: 462 GMHCESGDIIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAVTEAGAHV 521 Query: 401 IRPRMTFQELIELDS 415 + R T +L++LD Sbjct: 522 MIRRQTIDDLLDLDQ 536 Score = 99.5 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKANS 63 EG+L + E L +P Y T + F ++AF T V +A KA Sbjct: 22 EGALTFHGRTAESLLDEFGSPLYLIDTDEVSARARYFVRAAADAFTNSTTHVSFAGKAFL 81 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ V++ + G +D S GE+R ALAA VP R+V G K+ EI+LA++ G Sbjct: 82 SKEVVRLVTDAGMLVDTCSMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFAKIV 141 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 V+ E + A LGK+A + RV I+A H+ IST ++ KFG+P+ Sbjct: 142 VDEPDEPSRIAAIARRLGKRARVMLRVTAGIHAGGHEYISTAHEDQKFGVPL 193 >gi|86152555|ref|ZP_01070760.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843440|gb|EAQ60650.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 382 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 49/397 (12%), Positives = 119/397 (29%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN ++ + V ALK + +K + G Sbjct: 4 EKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 64 LWEAK---FAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSKTQKNSL 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + + + Sbjct: 121 GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE---------- 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ ++ ++ ++ GGG +H + +L Sbjct: 171 -----ESADALEAVLKVFEEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLIALCKN 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV V+ I ++ + ++ + + E Sbjct: 222 FSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + A +D+ G C GD + + GD + Sbjct: 282 VLNARILATRENEKISDLKENEFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L ++++ ++ +IR ++++ Sbjct: 342 YTIVKNTTFNGIRLPNLMLLDHKNELQMIRE-FSYKD 377 >gi|88596732|ref|ZP_01099969.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 84-25] gi|218563114|ref|YP_002344893.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88191573|gb|EAQ95545.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 84-25] gi|112360820|emb|CAL35620.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926720|gb|ADC29072.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni IA3902] gi|315927463|gb|EFV06801.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930108|gb|EFV09235.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 305] Length = 382 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 51/397 (12%), Positives = 119/397 (29%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN ++ + V ALK + +K + G Sbjct: 4 EKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 64 LWEAK---FAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSL 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + S + Sbjct: 121 GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTIEGLHFHALCE---------- 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ ++ ++ ++ GGG +H + +L Sbjct: 171 -----ESAGALEAVLKVFEEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLIALCKN 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV V+ I ++ + ++ + + E Sbjct: 222 FSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + A +D+ G C GD + + GD + Sbjct: 282 VLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L +++N ++ +IR ++++ Sbjct: 342 YTIVKNTTFNGIRLPNLMLLNAKNELQMIRE-FSYKD 377 >gi|157415737|ref|YP_001482993.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 81116] gi|157386701|gb|ABV53016.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 81116] gi|307748378|gb|ADN91648.1| Carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni M1] Length = 382 Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats. Identities = 49/397 (12%), Positives = 119/397 (29%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN ++ + V ALK + +K + G Sbjct: 4 EKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 64 LWEAK---FAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSKTQKNSL 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + + + Sbjct: 121 GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE---------- 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ ++ ++ ++ GGG +H + +L Sbjct: 171 -----ESADALEAVLKVFKEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLIALCKN 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV V+ I ++ + ++ + + E Sbjct: 222 FSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + A +D+ G C GD + + GD + Sbjct: 282 VLNARILATRENEKISDLKENEFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L ++++ ++ +IR ++++ Sbjct: 342 YTIVKNTTFNGIRLPNLMLLDHKNELQMIRE-FSYKD 377 >gi|121602791|ref|YP_988368.1| carboxynorspermidine decarboxylase [Bartonella bacilliformis KC583] gi|120614968|gb|ABM45569.1| carboxynorspermidine decarboxylase [Bartonella bacilliformis KC583] Length = 365 Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats. Identities = 46/383 (12%), Positives = 103/383 (26%), Gaps = 27/383 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + + KN + + ALK + ++ ++ G S EL Sbjct: 4 TPYYLIDKSKLIKNMEIIARLREMSGVKTLLALKCFATWSLFDLMSEYMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + E + ++ + ++ Sbjct: 64 RLGKEKFGKETHAYSVA-----------------WADHEIDEACGYADKIIFNSIQQLLR 106 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 I P L + ++ + + Sbjct: 107 FSDATQMIPKGLRLNPGISASNFDLANPSRPFSRLGESDQNSIEEVLPLINGLMIHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 FH ++L + ++ + + I +GGG+ H +A L+ ++ Sbjct: 167 NADFHLFEQMLNFMEEKFKKLFFAVDWISLGGGI----HFTAENYPLKTFAELLKRFSQT 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + LEPG + L V+ + ++ + +Y Sbjct: 223 YGVTVFLEPGEAAITKSTTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIY------REN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 ++ I G C GD P+ GD L + Y V+ +N Sbjct: 277 AKLEPNQGPYEVMICGKSCLAGDIFGTFHFPHPPKIGDRLSFQDAAGYTMVKKNWFNGIA 336 Query: 387 LIPEIMVNGSQFHIIRPRMTFQE 409 + ++ ++ + + + Sbjct: 337 MPAIVIKECDGTLTLQRQFNYND 359 >gi|57238538|ref|YP_179669.1| carboxynorspermidine decarboxylase [Campylobacter jejuni RM1221] gi|57167342|gb|AAW36121.1| carboxynorspermidine decarboxylase [Campylobacter jejuni RM1221] gi|315058969|gb|ADT73298.1| Carboxynorspermidine decarboxylase, putative [Campylobacter jejuni subsp. jejuni S3] Length = 382 Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats. Identities = 50/397 (12%), Positives = 119/397 (29%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN ++ + V ALK + +K + G Sbjct: 4 EKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 64 LWEAK---FAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSL 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + + + Sbjct: 121 GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE---------- 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ ++ ++ ++ GGG +H + +L Sbjct: 171 -----ESADALEAVLKAFEEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLIALCKN 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV V+ I ++ + ++ + + E Sbjct: 222 FSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + A +D+ G C GD + + GD + Sbjct: 282 VLNARILATRENEKISDLKENEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L +++N ++ +IR ++++ Sbjct: 342 YTIVKNTTFNGIRLPNLMLLNAKNELQMIRE-FSYKD 377 >gi|257487731|ref|ZP_05641772.1| ornithine decarboxylase, putative [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330985385|gb|EGH83488.1| ornithine decarboxylase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008471|gb|EGH88527.1| ornithine decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 371 Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats. Identities = 79/373 (21%), Positives = 133/373 (35%), Gaps = 21/373 (5%) Query: 18 LEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +LA T FY I +N FS F G V YA+KAN + V++ L+ G Sbjct: 5 LAQLADDTNDT-FYTVDPRWITRNAQQFSGCFPG---TVLYAMKANPLEQVLEALSQGGI 60 Query: 77 -GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 D+ S E++ A + + + V + + G+ F ++SE EL L Sbjct: 61 NHFDVASLAEVQTVHNTLPNAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRD 120 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R A + + P+ ++ AS+ G Sbjct: 121 VLPERDSTISLFVRY-----APSESTAVYDLRGKFGASPVLATQLVHQVASSTEWS--LG 173 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-- 253 + H+GSQ + + A D +R +++H+D+GGG Y + Sbjct: 174 LSFHVGSQALEDGPWLAALN---DADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLV 230 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 I +I E GR LV L +V+S ++ + + + + Sbjct: 231 GRVCEHIQTSPTLKDLNLICEAGRGLVYGGMSLFARVLSRREQSVFCGAGIFGGLLSAQQ 290 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 + A + P +I GP C++ D +A +A R D L + TG Sbjct: 291 WLQFPA--RVWREGTPYTGAAENTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTG 348 Query: 373 AYGAVQSGTYNSR 385 AY +N Sbjct: 349 AYSVSLRTPFNGF 361 >gi|282878563|ref|ZP_06287344.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Prevotella buccalis ATCC 35310] gi|281299354|gb|EFA91742.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Prevotella buccalis ATCC 35310] Length = 400 Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats. Identities = 71/398 (17%), Positives = 131/398 (32%), Gaps = 16/398 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLGSGLD 79 A ++TP + + K F A D ++++ Y++K N+ +K G + Sbjct: 8 AQHLKTPCFVLDKDELTKCINDFQTALDTQFDNSVIGYSVKTNALPYCLKVAKDSGCFAE 67 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 +VS E AL RI+++G K+ A+Q N+E+ E+ L+ + Sbjct: 68 VVSFQEYELALKIGYDKRRIIYNGPLKSKQTFLDAIQHD-AIVNIETWREIDWLDDLPKN 126 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 I +N + F S V++ G+ H Sbjct: 127 RKHDIGIRLNINTTSISAEDAFGENDDSRFGFSYESGDFQKAVELISAKRHVRLVGIHTH 186 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 + + S +++ + L +++ DVGGG + Sbjct: 187 ---KEPKTRSVRFYQRVIAYVLPILTDLRLQLEYWDVGGGFFGPMPGKPTFDDYARSFRT 243 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 ++++EPG L++ V VI +K+ K FV D ND + Sbjct: 244 ALDGSPYANVRLVVEPGNALLSSPFSYVCSVIDVKQHDGKRFVTTDGTRNDVDPFFHKED 303 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL----PRPGDLLYIEKTGAYG 375 Y + + H + G C D + + GD + ++ GAY Sbjct: 304 YFKRFVYTD-TPQLCHQPQVVGGLTCLEYDRL---FTLPEGTEALNVGDRVIFDRVGAYT 359 Query: 376 AVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 + + L + + IIR E I Sbjct: 360 MALTPLFI-HYLPTVYLKRCDGDYTIIRTEWGVDEFIR 396 >gi|319407852|emb|CBI81505.1| carboxynorspermidine decarboxylase [Bartonella sp. 1-1C] Length = 365 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 52/386 (13%), Positives = 114/386 (29%), Gaps = 31/386 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP+Y + + KN T ++ V ALK + ++ ++ G S E Sbjct: 3 GTPYYLIDKSKLIKNMKTIAHLRAISGVKVLLALKCFATWSLFDVMSQYMDGTTSSSLYE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 LR + + +R + K Sbjct: 63 LRLGKEKFGKETHAYSVA-------WADDEIDEACGYADKIIFNSIQQLKRFANTTKTIQ 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP I+A+ + + + G + ++ + Sbjct: 116 RGLRLNPGISASNFDLANPSRPFSRLGETNQDAIKEV----------LPLINGLMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F+ ++L + ++ + I I +GGG+ H D A + + Sbjct: 166 ENSDFNLFNQMLNHIEEKFKELFVAIDWISLGGGI----HFTAENYPLEDLAKRLKHFSQ 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + LEPG + L V+ + ++ + +Y Sbjct: 222 TYGVTVFLEPGEAAITKSTTLEVSVLDTLYNKKNLAIVDSSIEAHMLDLLIYR------- 274 Query: 326 IVNPAGDRLHIHAD--IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 N + H + + G C GD + + GD L + Y V+ +N Sbjct: 275 -ENAKLEPNHGPYEIMVCGKSCLAGDIFGTFQFPEPLKIGDKLSFQDAAGYTMVKKNWFN 333 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + ++ + ++ + Sbjct: 334 GVAMPAIVIKECNGTLTLQRQFSYND 359 >gi|229817125|ref|ZP_04447407.1| hypothetical protein BIFANG_02383 [Bifidobacterium angulatum DSM 20098] gi|229784914|gb|EEP21028.1| hypothetical protein BIFANG_02383 [Bifidobacterium angulatum DSM 20098] Length = 529 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 24/256 (9%) Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLG 241 +++ GV HIGS I ++F +A K + L + ++ + + +D+GGG Sbjct: 273 EIYRHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYS 332 Query: 242 IAYHSDHRPPSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV---- 290 +AY S I++ G I EPGR++VA G+ + +V Sbjct: 333 VAYTDGEDSMDIDAELGRLSQAVSSINRALGMPAPVISFEPGRWIVAPAGVTLYRVGTVK 392 Query: 291 ----------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI 340 + ++ +V +D M+D +RP LY A + + N G + + Sbjct: 393 PVQLSGDATDKAGNPVTERVYVSVDGGMSDNIRPALYGADY-AVKLANRKGSDETKLSRV 451 Query: 341 VGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFH 399 VG CE+GD I ++ + GD+L + TGAYG + YN L+ + V+ + H Sbjct: 452 VGMHCESGDIIVHECQLPADIKRGDVLAVPVTGAYGRTMASNYNQALIPAVVGVSEAGAH 511 Query: 400 IIRPRMTFQELIELDS 415 ++ R T +L+ D Sbjct: 512 VMIRRQTIDDLLGWDV 527 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 4/173 (2%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF----SNAFDGMDTMVCYALKAN 62 G + + E L +P Y T + + F ++AFD T V +A KA Sbjct: 15 ENGEITFHGRTAESLLGEFGSPLYLIDTDEVRQRAERFVRAAASAFDNTVTHVSFAGKAF 74 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 ++ + + + G +D S GE+R ALAA VP R+V G K+ +EI LA++ G Sbjct: 75 LSKEICRIVTGAGMLIDTCSMGEMRIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKI 134 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 ++ +E + Q A +GK+A + RV I+A H+ IST ++ KFG+ + Sbjct: 135 VIDEPNEPARIAQIARKMGKRARVMLRVTSGIHAGGHEFISTAHEDQKFGVSL 187 >gi|57504779|ref|ZP_00370811.1| carboxynorspermidine decarboxylase [Campylobacter coli RM2228] gi|305432307|ref|ZP_07401470.1| carboxynorspermidine decarboxylase [Campylobacter coli JV20] gi|57019340|gb|EAL56041.1| carboxynorspermidine decarboxylase [Campylobacter coli RM2228] gi|304444655|gb|EFM37305.1| carboxynorspermidine decarboxylase [Campylobacter coli JV20] Length = 382 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 49/396 (12%), Positives = 113/396 (28%), Gaps = 33/396 (8%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 QTP Y + +N +N + V ALK + +K + G Sbjct: 5 KFQTPAYILEEDKLRRNCEILANVGEKSGAKVLLALKGFAFSGAMKVVGEYLKGCTCSGL 64 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E + A ++ + + ++ + + S + + Sbjct: 65 WEAK---FAKEYMDKEIHTYSPAFKEDEMSEIAHLSHHIVFNSLYQFDKFKSLCANNSLG 121 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + + + + S + Sbjct: 122 LRCNLEFSFAPKELYNPCGKYSRLGILSKDLENFDLSGVEGLHFHALCE----------- 170 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 ES +L+ ++ ++ ++ GGG I +L + Sbjct: 171 ----ESADALEAVLKVFEEKFGKWIKQMKWVNFGGGHHITKQG----YDIQKIITLCKNF 222 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG + G+LV V+ I ++ + ++ + + E+ Sbjct: 223 SDKYGVQVYLEPGEAVGWQSGVLVASVVDIVENEKRIAILDTSSEAHMPDTIIMPYTSEV 282 Query: 324 NYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 A +D G C GD + + GD + Y Sbjct: 283 LNARILATRENEKISDFKENEFAYLLTGNTCLAGDVMGEYAFKEELKRGDRVVFLDQIHY 342 Query: 375 GAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 V++ T+N L +++N ++ ++R ++++ Sbjct: 343 SIVKNTTFNGIRLPNLMLLNSKNELEMVRE-FSYKD 377 >gi|330813289|ref|YP_004357528.1| ornithine decarboxylase / Arginine decarboxylase [Candidatus Pelagibacter sp. IMCC9063] gi|327486384|gb|AEA80789.1| ornithine decarboxylase / Arginine decarboxylase [Candidatus Pelagibacter sp. IMCC9063] Length = 394 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 80/377 (21%), Positives = 137/377 (36%), Gaps = 28/377 (7%) Query: 17 SLEKLAHVVQT----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 S+++L T P YC +IE + F N F G + YA+KAN N+ V+KTL Sbjct: 6 SVDELVEA--TRPVNPVYCIREDSIETSAAWFKNNFPGN---ILYAVKANPNEKVLKTLL 60 Query: 73 HLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 D + E+R A+ + + + + F+++S+ EL Sbjct: 61 KNNITDFDTATIEEIRLIKKIAPQAKTYFMHTIKSKESISEAYFKYNVKDFSLDSKDELD 120 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + + + + + KFG +++ SL Sbjct: 121 KILKATNQAK-------DLTLYLRIQASNEHAEIDLSKKFGATVYESSSLLRQIK--EVA 171 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 G+ H+GSQ S+ KA K + L ++ G I+VGGG Y + P Sbjct: 172 NKIGISFHVGSQCMHPISYSKALKDVSSLIKK---TGIEPNIINVGGGFPTTYPDMYPQP 228 Query: 252 SSSDYASLIHQY---FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + + + + ++ EPGR LVA+ G V +V KK ++ Sbjct: 229 LINYINEIKKSFAKLNLKSKPALLCEPGRALVAESGSTVVRVELRKKQNLYINDGTYGSL 288 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLY 367 D P + + + GP C+ DF+ + + GD + Sbjct: 289 FDAGTPQFIFPTKP--IQLKKTFTKRLVPYSFYGPTCDGIDFMKGPFMLPSNIKQGDYIE 346 Query: 368 IEKTGAYGAVQSGTYNS 384 I + GAYG +N Sbjct: 347 IGQLGAYGLSLRTKFNG 363 >gi|226328787|ref|ZP_03804305.1| hypothetical protein PROPEN_02687 [Proteus penneri ATCC 35198] gi|225201973|gb|EEG84327.1| hypothetical protein PROPEN_02687 [Proteus penneri ATCC 35198] Length = 351 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 81/349 (23%), Positives = 146/349 (41%), Gaps = 20/349 (5%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 +LA TP + Y I + N+FD +V +A KA SN +++ + G +D Sbjct: 5 QLAQTYGTPLWIYQGDTISQRIAQL-NSFD----VVRFAQKACSNIHILRLMKAQGVKVD 59 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 VS GE+ RAL A R V + ++ + ++ + + ++ Sbjct: 60 SVSLGEIERALVAGYQGGREKSEIVFTADLLDERTIER-VVELDIPVNAGSIDMLRQLGK 118 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + + R+NP +K +TG + K GI + A + + Sbjct: 119 RNQGHAVWIRINPGFGHGHSQKTNTGGENSKHGIWYEDVPEALAVIQQY-----NLTLVG 173 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 I +H + + +Q+ ++ +IQ I GGGL Y Y SL Sbjct: 174 FHMHIGSGVDYHHLSSVCDAMVEQVLTSQVDIQAISAGGGLSTPYQEGDATVDLDHYFSL 233 Query: 260 IHQYFGN------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + ++ +EPGRFLVA+ G+L+++V ++K + +V++D +D MR Sbjct: 234 WDKARQRIAQHLGHSIELEIEPGRFLVAESGVLISQVRAVKSMGSRHYVLVDAGFSDLMR 293 Query: 314 PTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 P +Y +YH+I + + GP+CE+GD + R++ L Sbjct: 294 PAMYGSYHQISVLDSHGQIKPMTELQETIVAGPLCESGDVLLSKREVWL 342 >gi|86149312|ref|ZP_01067543.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840094|gb|EAQ57352.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6] Length = 382 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 50/397 (12%), Positives = 120/397 (30%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN ++ + V ALK + +K + G Sbjct: 4 EKIQTPAYILEEDKLRKNCELLASVSEKSGVKVLLALKGFAFSGAMKIVGEYLKGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 64 LWEAK---FAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSL 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + ++ + Sbjct: 121 GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNVIEGLHFHALCE---------- 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ ++ ++ ++ GGG +H + +L Sbjct: 171 -----ESADALEAVLKAFEEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLIALCKN 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV V+ I ++ + ++ + + E Sbjct: 222 FSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + A +D+ G C GD + + GD + Sbjct: 282 VLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L +++N ++ +IR ++++ Sbjct: 342 YTIVKNTTFNGIRLPNLMLLNAKNELQMIRE-FSYKD 377 >gi|297787804|pdb|3N29|A Chain A, Crystal Structure Of Carboxynorspermidine Decarboxylase Comp Norspermidine From Campylobacter Jejuni gi|297787805|pdb|3N29|B Chain B, Crystal Structure Of Carboxynorspermidine Decarboxylase Comp Norspermidine From Campylobacter Jejuni Length = 418 Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats. Identities = 49/397 (12%), Positives = 119/397 (29%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN ++ + V ALK + +K + G Sbjct: 40 EKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSG 99 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 100 LWEAK---FAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSKTQKNSL 156 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + + + Sbjct: 157 GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE---------- 206 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ ++ ++ ++ GGG +H + +L Sbjct: 207 -----ESADALEAVLKVFEEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLIALCKN 257 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV V+ I ++ + ++ + + E Sbjct: 258 FSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 317 Query: 323 INYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + A +D+ G C GD + + GD + Sbjct: 318 VLNARILATRENEKISDLKENEFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIH 377 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L ++++ ++ +IR ++++ Sbjct: 378 YTIVKNTTFNGIRLPNLMLLDHKNELQMIRE-FSYKD 413 >gi|313682087|ref|YP_004059825.1| carboxynorspermidine decarboxylase [Sulfuricurvum kujiense DSM 16994] gi|313154947|gb|ADR33625.1| carboxynorspermidine decarboxylase [Sulfuricurvum kujiense DSM 16994] Length = 381 Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats. Identities = 54/384 (14%), Positives = 112/384 (29%), Gaps = 21/384 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP Y +EKN + ALK + + +A G E Sbjct: 12 TPCYICEEALLEKNLQVMERVQRESGAKIILALKGFAMWSTFPLVAKYLHGCTASGLHEA 71 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + A + V + DE + S ++ R S+ + Sbjct: 72 KL---AREKMNKEVHTYSPAFKDEDIDEIARISDDIVFNSPAQFHRYYDRVKSINPNISV 128 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + RVNP+ +++ + + G + + + L G+ + Sbjct: 129 SLRVNPEYSSSPVDLYNPCGVYSRLGTTL--ANFDESIVGKLDGLNFHALCEQ------- 179 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + +L + +++++ GGG I + ++ Sbjct: 180 --NVDALEGVLEAFEAKFGPFIDGLKYVNFGGGHHITRVDYDVERLIDVIRAFKARHNDI 237 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + LEPG + G LV V+ I ++ + + + P + Sbjct: 238 ---TVYLEPGEAVGWQTGPLVASVLDIVRNG--MDIAILDTSAEAHMPDTLAMPYRAMVR 292 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + G C GD + + GD + E Y V++ T+N Sbjct: 293 GSGEAGEKAHTYRFGGNTCLAGDIMGDYSFDEPLKVGDKIIFEDQIHYTFVKNTTFNGIK 352 Query: 387 LIP-EIMVNGSQFHIIRPRMTFQE 409 L I + ++ +++ Sbjct: 353 LPSLAIWTKEGELKMV-HAFGYED 375 >gi|119026435|ref|YP_910280.1| diaminopimelate decarboxylase [Bifidobacterium adolescentis ATCC 15703] gi|118766019|dbj|BAF40198.1| probable diaminopimelate decarboxylase [Bifidobacterium adolescentis ATCC 15703] Length = 524 Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 24/247 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ GV HIGS I ++F +A K + L + ++ + + +D+GGG +AY Sbjct: 277 ELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDS 336 Query: 251 PSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV------------- 290 D S +++ G I EPGR+ VA G+ + +V Sbjct: 337 MDIDVELGRLADAVSTVNRALGMPSPVISFEPGRWTVAPTGVTLYRVGTVKPVELSGEAK 396 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 S ++ +V +D M+D +RP LY + + + N G +VG CE+GD Sbjct: 397 DKSGNPVTERVYVSVDGGMSDNIRPALYGSDY-TARLANRKGSEQTKLCRVVGMHCESGD 455 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + ++ + GD+L + TGAYG + YN L+ + V + H++ R T Sbjct: 456 IVVNEVRLPADIKRGDILAVPVTGAYGRTMASNYNQALIPAVVGVGEAGAHVMIRRQTID 515 Query: 409 ELIELDS 415 +L+ D Sbjct: 516 DLLSWDV 522 Score = 93.7 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNA----FDGMDTMVCYALKANS 63 EG + + L +P Y T + F +A F+ T V +A KA Sbjct: 16 EGEITFHGRTAASLLDEFGSPLYVIDTDDVRARATKFVHAASHAFNNTVTHVSFAGKALL 75 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ + + + G +D + GE+R ALAA VP R+V G K+ EI+LA++ G Sbjct: 76 SKEICRIVTESGMLIDTCTMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFNKIV 135 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 V+ E + + A LGK+A + RV I+A H+ +ST ++ KFG+ + Sbjct: 136 VDEPGEPERIATIAKRLGKRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 187 >gi|208780272|ref|ZP_03247614.1| diaminopimelate decarboxylase [Francisella novicida FTG] gi|208743921|gb|EDZ90223.1| diaminopimelate decarboxylase [Francisella novicida FTG] Length = 416 Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats. Identities = 77/407 (18%), Positives = 149/407 (36%), Gaps = 28/407 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 +E + +P + A+ + F A +++ Y++K S +I+ +G Sbjct: 19 IETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVG 78 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS E + + + I+F+G K + ALQ N + E+ + + Sbjct: 79 FIPEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAM-INCDHFDEILRIAK 137 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L A I R+ + T + S I + + ++++G Sbjct: 138 IAKKLNITAKIGLRI---ADNKTPQNWSRFGFALTDQQNNSDIFTTIDKIQQIANIQLAG 194 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIG+ I I F K + +L + + + GG Sbjct: 195 LHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQP 254 Query: 256 YASLIHQYF--------------GNLQCKIILEPGRFLV-ADVGILVTKVISIKKSADKT 300 Y + + N + K+I E GR LV V +L T V + +++ D Sbjct: 255 YNPFDLELYAATIIAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQ 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +I D ++ + Y D H ++GP C DF+ + + Sbjct: 315 SLITDAGIHTIPTISTYRHPIYHL-----KTDSYHKKTLLLGPSCMQHDFLHDDIFLPKL 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMT 406 GD L I+ GAY ++ + L I+++ + Q+ ++R + T Sbjct: 370 EYGDKLLIDGVGAYNISRNNEFI-HLKPSVILIDKNQQYQVLRVKQT 415 >gi|154488019|ref|ZP_02029136.1| hypothetical protein BIFADO_01587 [Bifidobacterium adolescentis L2-32] gi|154083492|gb|EDN82537.1| hypothetical protein BIFADO_01587 [Bifidobacterium adolescentis L2-32] Length = 524 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 24/247 (9%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 ++ GV HIGS I ++F +A K + L + ++ + + +D+GGG +AY Sbjct: 277 ELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDS 336 Query: 251 PSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV------------- 290 D S +++ G I EPGR+ VA G+ + +V Sbjct: 337 MDIDVELGRLADAVSTVNRALGMPAPVISFEPGRWTVAPTGVTLYRVGTVKPVELSGEAK 396 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 S ++ +V +D M+D +RP LY + + + N G +VG CE+GD Sbjct: 397 DKSGNPVTERVYVSVDGGMSDNIRPALYGSDY-TARLANRKGSEQTKLCRVVGMHCESGD 455 Query: 350 FIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQ 408 + ++ + GD+L + TGAYG + YN L+ + V + H++ R T Sbjct: 456 IVVNEVRLPADIKRGDILAVPVTGAYGRTMASNYNQALIPAVVGVGEAGAHVMIRRQTID 515 Query: 409 ELIELDS 415 +L+ D Sbjct: 516 DLLSWDV 522 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNA----FDGMDTMVCYALKANS 63 EG + + L +P Y T + F +A F+ T V +A KA Sbjct: 16 EGEITFHGRTAASLLDEFGSPLYVIDTDDVRARATKFVHAASHAFNNTVTHVSFAGKALL 75 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ + + + G +D S GE+R ALAA VP R+V G K+ EI+LA++ G Sbjct: 76 SKEICRIVTESGMLIDTCSMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFNKIV 135 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 ++ E + A LGK+A + RV I+A H+ +ST ++ KFG+ + Sbjct: 136 IDEPDEPARIAAMAKRLGKRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 187 >gi|254375053|ref|ZP_04990533.1| hypothetical protein FTDG_01241 [Francisella novicida GA99-3548] gi|151572771|gb|EDN38425.1| hypothetical protein FTDG_01241 [Francisella novicida GA99-3548] Length = 416 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 78/407 (19%), Positives = 149/407 (36%), Gaps = 28/407 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 +E + +P + A+ + F A +++ Y++K S +I+ +G Sbjct: 19 IETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVG 78 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS E + + + I+F+G K + ALQ N + E+ + + Sbjct: 79 FIPEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAM-INCDHFDEILRIAK 137 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L A I RV + T + S I + + ++++G Sbjct: 138 IAKKLNITAKIGLRV---ADNKTPQNWSRFGFALTDLQSNSDIFTTIDKIQQIANIQLAG 194 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIG+ I I F K + +L + + + GG Sbjct: 195 LHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQP 254 Query: 256 YASLIHQYF--------------GNLQCKIILEPGRFLV-ADVGILVTKVISIKKSADKT 300 Y + + N + K+I E GR LV V +L T V + +++ D Sbjct: 255 YNPFDLELYAATIIAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQ 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +I D ++ + Y D H ++GP C DF+ + + Sbjct: 315 SLITDAGIHTIPTISTYRHPIYHL-----KTDSYHKKTLLLGPSCMQHDFLHDDIFLPKL 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMT 406 GD L I+ GAY ++ + L I+++ + Q+ ++R + T Sbjct: 370 EYGDKLLIDGVGAYNISRNNEFI-HLKPSVILIDKNQQYQVLRVKQT 415 >gi|222106820|ref|YP_002547611.1| carboxynorspermidine decarboxylase [Agrobacterium vitis S4] gi|221737999|gb|ACM38895.1| carboxynorspermidine decarboxylase [Agrobacterium vitis S4] Length = 365 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 54/387 (13%), Positives = 108/387 (27%), Gaps = 31/387 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTPFY + + N + + ALK + +V + G S E Sbjct: 3 QTPFYLIDKSKLLSNMEKIALLRETSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLYE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + E Sbjct: 63 VRLGRE-KFGGETHAYSVAYGDNEIDEVISHADKIIFNSVGQLERY-------------- 107 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I P L + + + + + Sbjct: 108 --GDKASGITRGLRLNPQVSSSSFDLADPARPFSRLGEWDAAKVEKVMDRISGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + F +L D+ + S H + + +GGG+ H + +A + ++ G Sbjct: 166 ENKDFALFDSMLSDIEAKFGSLLHRAEWVSLGGGI----HFTGEDYPLAQFAERLKRFSG 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + ++ + +Y Sbjct: 222 EYGVQVYLEPGEASITKSTTLEVSVLDTLYNGKNLAIVDSSIEAHMLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + I G C GD R + GD + I+ Y V+ +N Sbjct: 276 TAKLEPNAGDHSYMICGKSCLAGDVFGEFRFPEALKVGDRISIQDAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRPRMTFQEL 410 + I + +R ++ + Sbjct: 336 KMPS-IAIRELDGSIRTVRE-FSYADF 360 >gi|254420313|ref|ZP_05034037.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Brevundimonas sp. BAL3] gi|196186490|gb|EDX81466.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Brevundimonas sp. BAL3] Length = 399 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 61/338 (18%), Positives = 112/338 (33%), Gaps = 12/338 (3%) Query: 49 DGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKT 107 D + V YA+KAN ++ VI+TL G G D+ S E+ + V Sbjct: 15 DNLKADVFYAVKANPSRWVIETLIEAGVRGFDVASIAEIELVRSVSHDVRLAFMHPVKSR 74 Query: 108 IDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK 167 + G+ F+++ E LN+ + G + V ++A+ Sbjct: 75 SAITKAYFEHGVRTFSLDCVDE---LNKILDATGGADDLNLIVRMAVSADGAAY----TL 127 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 KFG+P Q +L + GV H+GSQ + ++ A + + Sbjct: 128 SGKFGVPADQAPALLLATRQAVKDGLMGVSFHVGSQCMRPTAYQAAMAQVGRSISRAGVI 187 Query: 228 GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 + + + ++ + ++ EPGR +VA+ ++ Sbjct: 188 VDIVDVGGGFPSVYPGMVPPDMSEYADAIHRGFNEMPVSETTELWCEPGRAIVAESSSIL 247 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 +V + D + T + + GP C++ Sbjct: 248 ARV---DLRKGDALYLNDGSYGSLFDATHSRWPFPTKLVRDGEAASELKAFQFYGPTCDS 304 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNS 384 D + + R GD + I GAYG S +N Sbjct: 305 IDHMPGPFWLPADIREGDFIEIGMLGAYGVAMSTGFNG 342 >gi|254373586|ref|ZP_04989072.1| hypothetical protein FTCG_01683 [Francisella tularensis subsp. novicida GA99-3549] gi|151571310|gb|EDN36964.1| hypothetical protein FTCG_01683 [Francisella novicida GA99-3549] Length = 416 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 78/407 (19%), Positives = 149/407 (36%), Gaps = 28/407 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 +E + +P + A+ + F A +++ Y++K S +I+ +G Sbjct: 19 IETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFCEVG 78 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS E + + + I+F+G K + ALQ N + E+ + + Sbjct: 79 FIPEVVSSDEFEQIQTLQLCDKSIIFNGPYKNDASLIKALQLNAM-INCDHFDEILRIAK 137 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L A I RV + T + S I + + ++++G Sbjct: 138 IAKKLNITAKIGLRV---ADNKTPQNWSRFGFALTDQQNNSDIFTTIDKIQQIANIQLAG 194 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIG+ I I F K + +L + + + GG Sbjct: 195 LHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQP 254 Query: 256 YASLIHQYF--------------GNLQCKIILEPGRFLV-ADVGILVTKVISIKKSADKT 300 Y + + N + K+I E GR LV V +L T V + +++ D Sbjct: 255 YNPFDLELYAATIIAPLKEYLNKTNNKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQ 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +I D ++ + Y D H ++GP C DF+ + + Sbjct: 315 SLITDAGIHTIPTISTYRHPIYHL-----KTDSYHKKTLLLGPSCMQHDFLHDDIFLPKL 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMT 406 GD L I+ GAY ++ + L I+++ + Q+ ++R + T Sbjct: 370 EYGDKLLIDGVGAYNISRNNEFI-HLKPSVILIDKNQQYQVLRVKQT 415 >gi|159475475|ref|XP_001695844.1| arginine/ornithine decarboxylase [Chlamydomonas reinhardtii] gi|158275404|gb|EDP01181.1| arginine/ornithine decarboxylase [Chlamydomonas reinhardtii] Length = 391 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 70/362 (19%), Positives = 121/362 (33%), Gaps = 22/362 (6%) Query: 51 MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDE 110 T+ +A+KAN +++ + G G ++ S GELR+ALA +R+VF KT E Sbjct: 12 PGTLHAFAIKANPVGRLLQIMREAGLGAEVASHGELRQALACGFVPDRVVFDSPIKTPAE 71 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 + AL++G+ + + + P + + +ST + K Sbjct: 72 LRFALRAGVRLNLDNLQELDRLDKTVCFKCSPAPCRSRCAGPQVGEGSIAALSTAGRVSK 131 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 FGIP+ + + A + + + + +Q Sbjct: 132 FGIPLLECRAQLLAAFRAHPWLNALHLHVGSQGVPLELTVEGVAAVAALAAEQQEQRRRR 191 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF---GNLQCKIILEPGRFLVADVGILV 287 GG + YA L+ Q ++ E GR LVA Sbjct: 192 RVLALDIGGGLPVMYGTDDLSVFDRYARLLQQRVPSLFPTATTLVTEFGRCLVAKAAFAA 251 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH---------- 337 +V K+ + V+ + + +R + + A + Sbjct: 252 GRVEYTKQCGGRRVVVSGLGGDLLLRAVYLPHTWPVRVELCDAAGQPKQPPARGGAAYGG 311 Query: 338 ---------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 D+VGP+C GD +A + PGD + + GAY YNSR Sbjct: 312 GGDDGDVAPTDVVGPLCFQGDKLAEAAPLPAAAPGDWVLVPDVGAYTLSMHSRYNSRCSP 371 Query: 389 PE 390 P Sbjct: 372 PV 373 >gi|240851382|ref|YP_002972785.1| carboxynorspermidine decarboxylase [Bartonella grahamii as4aup] gi|240268505|gb|ACS52093.1| carboxynorspermidine decarboxylase [Bartonella grahamii as4aup] Length = 365 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 54/383 (14%), Positives = 116/383 (30%), Gaps = 27/383 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + + KN T S + + ALK + +V ++ G S EL Sbjct: 4 TPYYLIDKSKLIKNMQTISRLREMSGAKILLALKCFATWSVFDLMSEFMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R E +S + + + + QR + K Sbjct: 64 RLGRE-KFGKETHAYSVAWADHEIDE------ACSYADKIIFNSIQQLQRFSNASKTIQR 116 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP I+A+ + + + G + ++ + + Sbjct: 117 GLRLNPGISASNFDLANPSRPFSRLGETNQSAIKEV----------LPLINGLMIHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F+ ++L + ++ + I +GGG+ H +A + Q+ Sbjct: 167 NADFNLFNQMLNHMEEKFAELFAAVDWISLGGGI----HFTAENYPLESFAKRLKQFSKT 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + LEPG + L V+ + ++ + +Y Sbjct: 223 HGVTLFLEPGEAAITKSTTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIY------REN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 ++ I G C GD + + GD L + Y V+ +N Sbjct: 277 AKLEPNQGPYEIMICGKSCLAGDIFGTFQFQKPLKIGDRLSFQDAAGYTMVKKNWFNGVT 336 Query: 387 LIPEIMVNGSQFHIIRPRMTFQE 409 + ++ ++ + ++ + Sbjct: 337 MPAIVLKECDGTLTLQRQFSYND 359 >gi|297602100|ref|NP_001052100.2| Os04g0136500 [Oryza sativa Japonica Group] gi|255675146|dbj|BAF14014.2| Os04g0136500 [Oryza sativa Japonica Group] Length = 378 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 116/358 (32%), Gaps = 45/358 (12%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + Y + A G YA+K N + A++ LA LG+G D S E+ Sbjct: 52 FHVLDLAKVVDLYAGWRRALPG--VRPFYAVKCNPDTALLGALAALGAGFDCASRAEIEA 109 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA VP IV++ K + A ++G+ +SE E+ + + S I Sbjct: 110 VLALGVPPAAIVYANPCKPGAHVAFAAEAGVNVTTYDSEEEVAKVKRCHPSCELLLRIK- 168 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 A + + +++ L A + V ++ + Sbjct: 169 -------APDCGGVKVRPRPQVPRATRNKVLPLLRAAPPRGPRRGRRVVPRRQRRVPRGR 221 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + R + + ++ +++ GG Sbjct: 222 LPRRHRGRARGVQRAAGLGMPPMRVLNIAGGF---------------------------- 253 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 PGR+ L +VI ++ D +D + + L D+Y + Sbjct: 254 ------PGRYFAETAFTLAARVIGKRRRGDVREYWIDDGVYGSLNCILLDSYVPRPRPLA 307 Query: 329 PAGDRLHIHA-DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 A HA + GP C++ D + ++ D L + GAY ++N Sbjct: 308 GARPGEETHASTVFGPTCDSIDTVVTGYQLPEMSVDDWLVFDDMGAYTTAAGSSFNGF 365 >gi|254488768|ref|ZP_05101973.1| NspC [Roseobacter sp. GAI101] gi|214045637|gb|EEB86275.1| NspC [Roseobacter sp. GAI101] Length = 370 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 116/390 (29%), Gaps = 31/390 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP+Y + N + ALK + +V +A G S Sbjct: 5 RELQTPYYLIDKARLLPNLEKIAWLRAESGAKSLLALKCFATWSVFDFMAQYMDGSTSSS 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+R P E +S + ++ S FN + + + Sbjct: 65 LYEVRLGHE-KFPGETHAYSVAYADHEIAEVLACSDKIIFNSIGQL------TKFADAAQ 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 RVNP ++ + + + G + A + + Sbjct: 118 GHIKGLRVNPGVSTSEFDLADPARPFSRLGEHDPDQIAAVAD----------QISGLMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + +SF + ++L + + + ++ I +GGG+ H A+ + Sbjct: 168 NNCENDSFERFDEMLTLIEGRFGAVIRDMDWISLGGGI----HFTGADYPLDRLAARLKS 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + L V+ + ++ + +Y Sbjct: 224 FAQTYGVQVYLEPGEAAITGAATLEVTVLDTMYNGKNLAIVDSSIEAHMLDLLIY----- 278 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + D I G C GD R A + GD L + Y V+ + Sbjct: 279 -REPAKISPDTGDHEWMICGKSCLAGDIFGEFRFDAPLKAGDRLSFQDAAGYTMVKKNWF 337 Query: 383 NSRLLIPEIMVN--GSQFHIIRPRMTFQEL 410 N + I + ++R + + Sbjct: 338 NGVKMPG-IAIRELDGTTRLVRD-FDYDDF 365 >gi|323451542|gb|EGB07419.1| hypothetical protein AURANDRAFT_27655 [Aureococcus anophagefferens] Length = 565 Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats. Identities = 58/395 (14%), Positives = 100/395 (25%), Gaps = 35/395 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY A E+ Y ++ A YA+K + + + LA G G D SE E R Sbjct: 143 PFYVVDVGAAERLYDAWAAALPR--VRPHYAVKCFPDAGLCRALAAKGCGFDCASEAECR 200 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A +VF+ K +++ SG+ + EL L + Sbjct: 201 LVFACGATPRDVVFANPCKRPSDVNFLAASGVPWTTFDCCDELAKLAGLLPGATRAV--- 257 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + + T + K + + A + GV Sbjct: 258 --LRLRCDDPTSRLPFGPKYGALEDEVPGLLAAARAAGVAVAGVSFHVGSGARSPAAFAA 315 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA-------YHSDHRPPSSSDYASLI 260 + GG + + + L Sbjct: 316 AIAAARRAFDANAAAGGAPFDVLDIGGGFCGGFDASGTAAVSASGDATVAAAVNAALDLS 375 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT---------FVILDVAMNDF 311 +I EPGR+ L +V+ + + + + Sbjct: 376 FPASDFPGLDVIAEPGRYFAEAAASLCCRVVGERHRSRADVGAPPEPEAQYWITDGVYGA 435 Query: 312 MRPTLYDAYHEI-----------NYIVNPAGDRLHIHADIVGPICETGD-FIALNRKIAL 359 +YD + + GP C++ D + R Sbjct: 436 FNAIIYDGWLPHAVVVDDPRRAHGAGDAGGRGAGAALTTVFGPTCDSLDVVFSRVRNAPP 495 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN 394 R D L GAY + + +N V Sbjct: 496 LRRDDWLLFPCCGAYTSAGAADFNGIPATAAAGVE 530 >gi|307825889|ref|ZP_07656104.1| Orn/DAP/Arg decarboxylase 2 [Methylobacter tundripaludum SV96] gi|307733008|gb|EFO03870.1| Orn/DAP/Arg decarboxylase 2 [Methylobacter tundripaludum SV96] Length = 380 Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats. Identities = 68/368 (18%), Positives = 128/368 (34%), Gaps = 22/368 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 +P + + K + + Y++K+ AV+ G + S Sbjct: 11 YSSPAFVLDEIEVTKALEILAELRTQCGCKILYSIKSLPFSAVMDMAKPFVDGFSVSSLF 70 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R A I + G DE+D + S + L + + + G ++ Sbjct: 71 EARLADEVLAGQSSIHLTTPGIRQDELDELSL----LCSHISFNSLTQHQRYSETAGAQS 126 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I RVNP ++ +++F A + + ++ + Sbjct: 127 SIGLRVNPKLSF---------LHDERFDPCRQHSKLGVAIDELSHSICLDQIEGLHVHNV 177 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 F K + L Q L + ++ +++GGG DHR + L+++ Sbjct: 178 FSATDFTPLIKTIEKLQQHLGAGLAQLEWLNIGGGYLFGQIEDHR-----PFVELVNKLK 232 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + ++ +EPG+ +V G LV V+ S +T VILD ++N Y E Sbjct: 233 HDFGVEVYIEPGKAIVGRAGHLVATVLDRFVSDGETIVILDTSINHNPEVFEYQRQPE-- 290 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 ++ A + G C GD R GD + + GAY +++ +N Sbjct: 291 --LHEHDPDGQYAAILAGCTCLAGDVFGQYRFKEPLEVGDKVVFKNVGAYTLIKANRFNG 348 Query: 385 RLLIPEIM 392 L + Sbjct: 349 YNLPDIYL 356 >gi|302384357|ref|YP_003820180.1| Orn/DAP/Arg decarboxylase 2 [Brevundimonas subvibrioides ATCC 15264] gi|302194985|gb|ADL02557.1| Orn/DAP/Arg decarboxylase 2 [Brevundimonas subvibrioides ATCC 15264] Length = 421 Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 108/346 (31%), Gaps = 15/346 (4%) Query: 41 YLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAERI 99 F + V YA+KAN ++ VI+TL G G D+ S E+ + Sbjct: 32 ARWFQDNLK---ADVFYAVKANPSRWVIETLVEAGVTGFDVASLAEIELVRSVSTDVRLA 88 Query: 100 VFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTH 159 V G+ F+++ E E L + + G + V ++A+ Sbjct: 89 FMHPVKSRSAITKAYFDHGVRTFSLDCEDE---LQKILDATGGANDLNLLVRMAVSADGA 145 Query: 160 KKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD 219 +GK + + + GV H+GSQ + ++ A + Sbjct: 146 AYSLSGKFGVSTDQAPSLLLATRRAVKDG----LMGVCFHVGSQCMRPTAYQAAMAQVGR 201 Query: 220 LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFL 279 + + + + ++ + ++ EPGR L Sbjct: 202 AITRAGVIVDIVDIGGGFPSVYPGMVPPDMSEYADAIHRGFNEMPVSETTELWCEPGRAL 261 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 VA+ ++ +V + D + T + + Sbjct: 262 VAESSSILARV---DLRKGDALYLNDGSYGSLFDATHSRWPFPTKLVRDGDASSDLKPFQ 318 Query: 340 IVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNS 384 GP C++ D + + R GD + I GAYG S +N Sbjct: 319 FYGPTCDSIDHMPGPFWLPADIREGDFIEIGMLGAYGVAMSTGFNG 364 >gi|332710990|ref|ZP_08430926.1| carboxynorspermidine decarboxylase [Lyngbya majuscula 3L] gi|332350304|gb|EGJ29908.1| carboxynorspermidine decarboxylase [Lyngbya majuscula 3L] Length = 379 Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 59/389 (15%), Positives = 120/389 (30%), Gaps = 24/389 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + +P Y + + +N + + ALK + + + G S Sbjct: 6 QIPSPCYVLESEKLIENLELIDSVQKKAGITIILALKGFAMFSAFPIVKQYLQGTTASSL 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R E ++ + + +L + FN S+ E Sbjct: 66 FEARLGRE-EFGGELHLYLLAYQEKEFPELIQGATHISFNSLSQWERFKEKT-------- 116 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + ++ E + P + L A L G++ Sbjct: 117 ------LLTQVSPGLRINPEYSPVEPEIYNPSSPLSRLGIRAEKLGDKLPEGIEGLHCHN 170 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + +S A + L + + I+ +++GGG I S Sbjct: 171 LCESDSQALA-RTLEQIETLFGHHLPQIKWLNLGGGHLITSKSYDIEHLIEVL---TRFK 226 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 I LEPG + + G+L V+ + ++++ +LDV+ M L Y Sbjct: 227 SRYPHLHIYLEPGSAVAWETGVLRATVLDLIETSNLIIAMLDVSFTAHMPDCLEMPYKPR 286 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDF--IALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + + G C GDF + + GD + E Y V++ Sbjct: 287 IRGARDPQQKEP-RYRMGGLTCLAGDFMGMGDYYFETPLQVGDTIVFEDMIHYTMVKTSM 345 Query: 382 YNSRLLIPE-IMVNGSQFHIIRPRMTFQE 409 +N I+ + F+++R +++ Sbjct: 346 FNGIKHPAIGIVRSDGTFNLVRE-FGYED 373 >gi|319404893|emb|CBI78494.1| carboxynorspermidine decarboxylase [Bartonella rochalimae ATCC BAA-1498] Length = 365 Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 52/386 (13%), Positives = 114/386 (29%), Gaps = 31/386 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP+Y + + KN T ++ V ALK + ++ ++ G S E Sbjct: 3 GTPYYLIDKSKLIKNMKTIAHLRAISRVKVLLALKCFATWSLFDVMSQYMDGTTSSSLYE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 LR + + +R + K Sbjct: 63 LRLGKEKFGKETHAYSVA-------WADDEIDEACGYADKIIFNSIQQLKRFANTTKTIQ 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP I+A+ + + + G + ++ + Sbjct: 116 RGLRLNPGISASNFDLANPSRPFSRLGETNQDAIKEV----------LPLINGLMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F+ ++L + ++ + I I +GGG+ H D A + + Sbjct: 166 ENSDFNLFNQMLNHIEEKFKELFVAIDWISLGGGI----HFTAENYPLEDLAKRLKHFSQ 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + LEPG + L V+ + ++ + +Y Sbjct: 222 TYGVTVFLEPGEAAITKSTTLEVSVLDTLYNKKNLAIVDSSIEAHMLDLLIYR------- 274 Query: 326 IVNPAGDRLHIHAD--IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 N + H + + G C GD + + GD L + Y V+ +N Sbjct: 275 -ENAKLEPNHGPYEIMVCGKSCLAGDIFGTFQFPEPLKIGDKLSFQDAAGYTMVKKNWFN 333 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + ++ + ++ + Sbjct: 334 GVAMPAIVIKECNGTLTLQRQFSYND 359 >gi|291513701|emb|CBK62911.1| Diaminopimelate decarboxylase [Alistipes shahii WAL 8301] Length = 464 Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 51/446 (11%), Positives = 123/446 (27%), Gaps = 38/446 (8%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV------ 55 F + L+ ++ L +L TP I + F+ V Sbjct: 18 DEFSVEDNELNFHDIPLMELIKQYGTPLKITYLPKISQQINRAKRMFNVAMAKVDYKGSY 77 Query: 56 --CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPV----PAERIVFSGVGKTID 109 CY K++ V++ L+ S ++ A +R + K Sbjct: 78 NYCYCTKSSHFSFVLEEAMKNDIHLETSSAYDIHIINALYDGGIIDKDRYIICNGFKRPQ 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 ++ Q F+ + T + Sbjct: 138 YVENIAQLVNDGFSNTIPVLDNKEELELFEDSFTKKCKVGIRIACEEEPKFDFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 ++ + A ++ + I + I + ++ +L++ Sbjct: 198 RYND---IVDFYKAKLRNSKKFQLKMLHFFINTGIKDTAYYWNELSKCMNVYCELKAICP 254 Query: 230 NIQHIDVGGGLGIA---YHSDHRPPSSSDYASLIHQYFGNL---QCKIILEPGRFLVADV 283 + ++VGGG I + + + I + I E G F V + Sbjct: 255 ELDSLNVGGGFPIKNSLNFEYDYEYLTEEIVAQIKNICQRNGVEEPNIFTEFGSFTVGES 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G ++ +++ K+ D+ + + P + + D+ + + G Sbjct: 315 GAVLYSIVNQKQQNDRENWYMIDSSFITTLPDTWGINQRYIMLAVNNWDKEYQRVLLGGL 374 Query: 344 ICETGDFI-----ALNRKIALPRPG--DLLYIEKTGAYGAVQSG----TYNSRLLIPEIM 392 C++ DF + G + TGAY G + ++ Sbjct: 375 TCDSEDFYNSECHTSAIFLPKLEAGNTQYIGFFHTGAYQESLGGFGGIQHCLIPAPKHVI 434 Query: 393 VNGSQF------HIIRPRMTFQELIE 412 ++ + + +++ ++ Sbjct: 435 IDRDKSDNEYYTRLFAKEQSYRSMLR 460 >gi|224367263|ref|YP_002601426.1| NspC [Desulfobacterium autotrophicum HRM2] gi|223689979|gb|ACN13262.1| NspC [Desulfobacterium autotrophicum HRM2] Length = 385 Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 67/381 (17%), Positives = 114/381 (29%), Gaps = 20/381 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V TP + + N + + ALK + V L G+ S Sbjct: 13 RVSTPGFVVDADCLRHNLSILARVKQATGCRILLALKGFAMFRVFPLLRETLDGVCASSP 72 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R R V + DE L + S + K R + G+ Sbjct: 73 DEARLGREEFC---REVHTFAAAFSDEHMDELLTLSDHIVFNSFGQWKRFKARVQAAGRA 129 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 RVNP+ + T + G+ + +++G+ Sbjct: 130 ISCGIRVNPEHSEGTIPLYDPCAPGSRLGV----------RRANFEAAELAGISGLHFHT 179 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + ++ + + + ++ GGG I +I + Sbjct: 180 LCEQDADA-LERTVTAFEHGFGPFLKGLAWVNFGGGHHITRPG----YDLERLCRVIRRI 234 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + + LEPG + + G+LV V+ I S D ILD + M L Y Sbjct: 235 QTDYNVTVYLEPGEAVALNAGVLVASVLDIINS-DMPIAILDTSAAAHMPDVLEMPYRPH 293 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 G++ H + G C GD I + G L Y V++ T+N Sbjct: 294 VTGSGEPGEKQH-TYRLAGLSCLAGDVIGEYSFDHPLKIGSRLVFTDMAIYSMVKTNTFN 352 Query: 384 SRLLIPEIMVNGSQFHIIRPR 404 L + + R R Sbjct: 353 GIRLPSISLYEPDTDCLERVR 373 >gi|15602236|ref|NP_245308.1| NspC [Pasteurella multocida subsp. multocida str. Pm70] gi|12720617|gb|AAK02455.1| NspC [Pasteurella multocida subsp. multocida str. Pm70] Length = 373 Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 109/381 (28%), Gaps = 26/381 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 +QTP+Y + + +N + + ALK + V + G S Sbjct: 5 TLQTPYYLIDKSKLLRNMEKIAYLREKSGAKALLALKCFATWGVFDFMCQYMDGTTSSSL 64 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E++ E +S E + ++ + + Sbjct: 65 YEVKLGRE-KFGGETHAYSV----------------AYSPEEIGEVVANADKIIFNSISQ 107 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + P L + + ++ + Sbjct: 108 LQRFCDHTTHLPRGLRVNPRVSTSSFLLADPARPHSRLGEWDVAKIRDVMPLINGFMFHN 167 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + E F K ++L + Q+ H + + +GGG+ H +A + Q+ Sbjct: 168 NCENEDFGKFCEMLDRIEQEFGELLHQVDWVSLGGGI----HFTGENYPLEAFAERLKQF 223 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG + L V+ I + + ++ + +Y + E Sbjct: 224 SAKFGVQVYLEPGEAAITLSTSLEVTVLDILNNGKELAIVDAATEAHMLDLLIYRS--EA 281 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + + + G C GD R + GD + Y V+ +N Sbjct: 282 KLLPDAFQGKGDYQYMVCGKSCLAGDIFGEYRFEKPLQIGDRISFCDAAGYTMVKKNWFN 341 Query: 384 SRLLIPEIMVN--GSQFHIIR 402 + I + + +++ Sbjct: 342 GVNMPA-IAIKELDGRIRVVK 361 >gi|332678981|gb|AEE88110.1| Diaminopimelate decarboxylase [Francisella cf. novicida Fx1] Length = 417 Score = 116 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 78/407 (19%), Positives = 149/407 (36%), Gaps = 28/407 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 +E + +P + A+ + F A +++ Y++K S +I+ +G Sbjct: 19 IETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVG 78 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS E + + + I+F+G K + ALQ N + E+ + + Sbjct: 79 FIPEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAM-INCDHFDEILRIAK 137 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L A I RV + T + S I + + ++++G Sbjct: 138 IAKKLNITAKIGLRV---ADNKTPQNWSRFGFALTDLQSNSDIFTTIDKIQQIANIQLAG 194 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIG+ I I F K + +L + + + GG Sbjct: 195 LHCHIGTNIRDISRFTAMAKNIGELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQP 254 Query: 256 YASLIHQYF--------------GNLQCKIILEPGRFLV-ADVGILVTKVISIKKSADKT 300 Y + + N + K+I E GR LV V +L T V + +++ D Sbjct: 255 YNPFDLELYAATIIAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQ 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +I D ++ + Y D H ++GP C DF+ + + Sbjct: 315 SLITDAGIHTIPTISTYRHPIYHL-----KTDSYHKKTLLLGPSCMQHDFLHDDIFLPKL 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMT 406 GD L I+ GAY ++ + L I+++ + Q+ ++R + T Sbjct: 370 EYGDKLLIDGVGAYNISRNNEFI-HLKPSVILIDKNQQYQVLRVKQT 415 >gi|319409446|emb|CBI83095.1| carboxynorspermidine decarboxylase [Bartonella schoenbuchensis R1] Length = 365 Score = 116 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 52/383 (13%), Positives = 112/383 (29%), Gaps = 27/383 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + + KN + + V ALK + +V ++ G S EL Sbjct: 4 TPYYLIDKSKLIKNMEIIARLREMSGIKVLLALKCFATWSVFDFMSEYMDGSTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + + + QR S K Sbjct: 64 RLGREKFGKETHAYSVA-------WADDEIDEVCTYADKIIFNSIQQLQRFASTTKTIQR 116 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP I+A+ + + + G + ++ + + Sbjct: 117 GLRLNPGISASNFDLANPSRPFSRLGETNQSAIEEV----------LPLINGLMIHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F+ ++L + ++ + + I +GGG+ H A + ++ Sbjct: 167 NADFNLFNQMLNHIEEKFKKLFIAVDWISLGGGI----HFTGNNYPLEALAERLKRFSQT 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + LEPG + L V+ + ++ + +Y Sbjct: 223 YNVTVFLEPGEAAITKSTTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIY------REN 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 ++ + G C GD + L + GD L + Y V+ +N Sbjct: 277 AKLEPNQGSHEIMVCGKSCLAGDIFGTFQFPELLKIGDRLSFQDAAGYTMVKKNWFNGVA 336 Query: 387 LIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + I+ + + + Sbjct: 337 MPAIVIKECNGNLTIQRQFNYND 359 >gi|300175062|emb|CBK20373.2| unnamed protein product [Blastocystis hominis] Length = 452 Score = 116 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 77/386 (19%), Positives = 153/386 (39%), Gaps = 31/386 (8%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL-GSGLDIVSEGELRRA 89 + T++ Y T+ N F D YA+K N N ++ + L G +D E+ Sbjct: 85 IFDLTSVLVQYKTWFNVFG--DVQPFYAMKCNPNPKLMDLMCSLPGMCVDCAGVEEINMC 142 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L+ + + I+F+ K+++ I+ ++GI+ V+S E++ ++ K I R Sbjct: 143 LSRGIKPDHIIFANPIKSVEGIECMRKNGIWTGTVDSIEEVQKMHDVLGEDAKHCRIVIR 202 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 + D S KFG + ++ + L G++ GV H+G+ + + Sbjct: 203 LWVD------DSHSIIALGSKFGCHLSEVRGILNQVQ-LCGMEAVGVAFHVGTGNEDQYA 255 Query: 210 FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL-------GIAYHSDHRPPSSSDYASLIHQ 262 + KA + ++ + + G + +D+GGG S A H+ Sbjct: 256 YEKAVRDSAEVFKMAKEFGFTMTLLDLGGGWAGDLGNDKFENPSLTSVCGIIRDAVKKHE 315 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 F ++I EPGR+ + + KV+++ K +T ++ + + Sbjct: 316 VFSTEGFRMISEPGRYFNNNTVSVACKVLNVSKRGGRTVYKINEGVMGVFHDL---ILCD 372 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 +N+ V P + A I+G D + N + + GD++ + GAY + Sbjct: 373 MNFDVEPLVEGEKHPASIIGSSIMQKDVVLSNIDLPEMKVGDIILFKNIGAYSVSLTT-- 430 Query: 383 NSRLLIPEIMVNGSQFHI-IRPRMTF 407 L + +Q H+ I R + Sbjct: 431 ----LP----LRRNQDHVYIVRRSSL 448 >gi|15806427|ref|NP_295133.1| carboxynorspermidine decarboxylase [Deinococcus radiodurans R1] gi|6459163|gb|AAF10976.1|AE001986_1 carboxynorspermidine decarboxylase [Deinococcus radiodurans R1] Length = 416 Score = 116 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 45/390 (11%), Positives = 103/390 (26%), Gaps = 25/390 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 + +P + T + +N + + A K S + L G G Sbjct: 30 DRIPSPAFVLDETRLRRNLTLINYVQQQSGAQIIVAFKGFSMWSTFPLLREYGITGATAS 89 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E + E V++ D + + FN ++ E Q + Sbjct: 90 SLNE-AILAKEEMQGEVHVYAPAYSDEDFPRILELADHLVFNSFAQWERFRP-QVQAARA 147 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + + + + + + + G+ + Sbjct: 148 GGRELHVGIRINPEYAEVETDLYNPAGPFSRLGVTRREFREDLLDGIDGLHFHTLCE--- 204 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + L + + + ++ GGG + ++ Sbjct: 205 ------KDSDTLERTLEVVERNFGEFLPRMNWVNFGGGHLMTREG----YDIPRLIRVVK 254 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK--------TFVILDVAMNDFMR 313 + +ILEPG G LV+ V+ + + + + DV + Sbjct: 255 AFREKHGVHVILEPGSAFGWQTGWLVSSVLDVVHNVKDAALLDVSVSAHMPDVLEMPYRP 314 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 L ++ I G C GD + + G + + Sbjct: 315 RILGAGDPPLDDHREAQDTGSGYPYIIGGTTCLAGDVVGEYVFPHELKVGSRVVFDDMIH 374 Query: 374 YGAVQSGTYNSRLLIPE-IMVNGSQFHIIR 402 Y V++ +N I+ + ++ Sbjct: 375 YTMVKTTFFNGVKHPDIGILHADGSYERVK 404 >gi|121612689|ref|YP_001001162.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|167006055|ref|ZP_02271813.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|87249963|gb|EAQ72922.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] Length = 382 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 51/397 (12%), Positives = 119/397 (29%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN ++ + V ALK + +K + G Sbjct: 4 ENIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 64 LWEAK---FAKEYMDKEIHTYSPAFKEDEIDEIASLSHHIVFNSLAQFHKFQAKTQKNSL 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + S + Sbjct: 121 GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTIEGLHFHALCE---------- 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ ++ ++ ++ GGG +H + +L Sbjct: 171 -----ESADALEAVLKVFEEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLIALCKN 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV V+ I ++ + ++ + + E Sbjct: 222 FSDKYSVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + A +D+ G C GD + + GD + Sbjct: 282 VLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L +++N ++ +IR ++++ Sbjct: 342 YTIVKNTTFNGIRLPNLMLLNAKNELQMIRE-FSYKD 377 >gi|265753475|ref|ZP_06088830.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_33FAA] gi|263235189|gb|EEZ20713.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_33FAA] Length = 387 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 59/393 (15%), Positives = 113/393 (28%), Gaps = 24/393 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P Y + KN + D + A K+ + S Sbjct: 6 KVPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFSVFREYIRYTTASSV 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A + D + S S+ + + G+K Sbjct: 66 YEARLAYEEFGSKAH---TYSPAYTDTDFPVIMQCSSHITFNSFSQFRRFYPMVKASGEK 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 R+NP+ + + + +FG+ + + Sbjct: 123 ISCGIRINPEYSEVEVELYNPCAPGTRFGVTADLLPET-----------LPEGIEGFHCH 171 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 S ++ L+ + + I+ +++GGG + S L +Y Sbjct: 172 CHCESSSYELEHTLQHIEETFARWFPQIKWLNLGGGHLMTRKDYDTEHLISLLKGLKARY 231 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +IILEPG G LV V+ I ++ ILDV+ M L Y Sbjct: 232 PHL---EIILEPGSAFTWQTGPLVASVVDIVENRGIKTAILDVSFTCHMPDCLEMPYQPA 288 Query: 324 NYIVNPAGDRLHIH-------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 + G C +GD++ R + G+ + +E Y Sbjct: 289 VRGAEALPVDAIKTALTEENIYRLGGNSCLSGDYMGSWRFDHPLQVGERIVLEDMIHYTM 348 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 V++ +N + + + +++ Sbjct: 349 VKTNMFNGIHHPSIAIWHIDNTLEVYKDFRYED 381 >gi|281425169|ref|ZP_06256082.1| carboxynorspermidine decarboxylase [Prevotella oris F0302] gi|281400635|gb|EFB31466.1| carboxynorspermidine decarboxylase [Prevotella oris F0302] Length = 388 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 59/380 (15%), Positives = 110/380 (28%), Gaps = 21/380 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + +N +N D + A KA + S E R Sbjct: 15 PIYILEEARLRRNLNLIANVAREADVEIILAFKAYALWKTFPIFREYIHATTASSLSEAR 74 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A + T DEID + S ++ ++R + Sbjct: 75 LA--LEEFGSKAHTFSPAYTDDEIDEIARC-SSHLQFNSLTQYARYHERVRKVNPTISYG 131 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNP+ + + +FGI ++ + Sbjct: 132 LRVNPEYSEVGTDLYNPCAPGTRFGISADKMPEMLPDDI-----------EGFHCHCHCE 180 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L+ + + ++ I+ GGG + H + Sbjct: 181 SGADVFERTLKHIENKFSRWFSQLKWINFGGGHLMTRHDYDTLLLVDTL---QKFHMRYP 237 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 K+ILEPG G LV++V+ + + IL+V+ M L Y+ + Sbjct: 238 WLKVILEPGSAFAWQTGPLVSQVVDVVEDHGIKTAILNVSFTCHMPDCLEMPYNPVVRGS 297 Query: 328 NP---AGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 + G C +GDF+ + + G+ + E Y V++ +N Sbjct: 298 EYIEADDKSSPYIYRLGGNSCLSGDFMGYWKFDHALQVGENVIFEDMLHYTTVKTNMFNG 357 Query: 385 RLLIPEIMVN-GSQFHIIRP 403 + ++R Sbjct: 358 ISHPAIGLAKLDGTLEVLRK 377 >gi|312882026|ref|ZP_07741780.1| lysine/ornithine decarboxylase [Vibrio caribbenthicus ATCC BAA-2122] gi|309370321|gb|EFP97819.1| lysine/ornithine decarboxylase [Vibrio caribbenthicus ATCC BAA-2122] Length = 402 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 84/376 (22%), Positives = 152/376 (40%), Gaps = 30/376 (7%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 I + Y ++ +T + +A+KA N V+ LA G+G D S E+ A+ Sbjct: 19 ILDIEGIRRQYTFLQDSLP--NTQIRFAIKACPNDEVLAALAQKGAGFDAASPNEIIAAI 76 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 + + I + K+ ++I LA + GI F +S+ +L +++ A + IA Sbjct: 77 KSGANLKNIHYGNTIKSNEQISLAFKLGIKDFVTDSKEDLYAVSEYAPNSNIFCRIA--- 133 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 T + KFG I+ + A + ++ GV +HIGSQ Q++++ Sbjct: 134 -------TDGNGAVWSLSKKFGCSINATVEILKLAKNIG-LEPVGVSLHIGSQQLQVDAW 185 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA-YHSDHRPPSSSDYASLIHQYFGNLQC 269 +K F L +L ++L + ++I++GGGL + Y H +D + + Sbjct: 186 NKVFSSLAELLKRLAKDNIYPKYINLGGGLPASGYLDKHGKVMHADIKKTLKTIKDGINH 245 Query: 270 ---------KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT--LYD 318 + I+EPGRF+VAD G++ V+ + R Sbjct: 246 LGSLSLRPLQFIIEPGRFMVADFGVIRAHVVRLTTREQLNGEKQHWLYLSVGRYNGLYEL 305 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN---RKIAL-PRPGDLLYIEKTGAY 374 + ++ A + GP C++ D + + + GD + I TGAY Sbjct: 306 DALRFPILFPTVKSNQYVKAFVAGPTCDSDDILTSENAPISVPANLKAGDPVLILSTGAY 365 Query: 375 GAVQSGT-YNSRLLIP 389 S +N L +P Sbjct: 366 TTSCSSVGFNGFLPLP 381 >gi|224372172|ref|YP_002606544.1| carboxynorspermidine decarboxylase [Nautilia profundicola AmH] gi|223588820|gb|ACM92556.1| carboxynorspermidine decarboxylase [Nautilia profundicola AmH] Length = 371 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 122/385 (31%), Gaps = 24/385 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP Y +EKN D + ALK + + L SG E Sbjct: 5 TPAYVIEEKLLEKNLKVLDRVQKEADAKILVALKGYATWSTFDLLEKYLSGATASGLWEA 64 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + A P E + K + ++A S FN ++ E + + K+ I Sbjct: 65 KLANM--KPWEVHTYCPAFKDSEIDEVADISHTVVFNSFNQLE-----RFENRVKDKSLI 117 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 RVNP ++++ + GIP + +SG+ H + Sbjct: 118 GLRVNPGVSSSPVPLYDPCAPFSRLGIPKVNFKAD-------KLKNVSGLHFHALCEQLD 170 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + L + +++ ++ GGG I + +Y Sbjct: 171 ----DALERTLEGFEKLYGEYLKDMEWVNFGGGHHITREGYDVEHLIEMIKAFRSRYPNI 226 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + LEPG + + G LV +V+ I + + + + P + + Sbjct: 227 K--DVYLEPGEAVGLNAGYLVAEVLDIIDNG--MKIAILDTSAEAHMPDVLAMPYRPVVR 282 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + + G C GD I GD + E Y V++ +N Sbjct: 283 GAGEPNEKKYTYRLGGVTCLAGDVIGDYSFDKPLEIGDKVIFEDMAIYTMVKNTAFNGIK 342 Query: 387 LIPEIMVNGSQFHIIRPRM-TFQEL 410 L +I++ I + R +++ Sbjct: 343 LP-DIIIKRKDGSIYKAREFHYEDF 366 >gi|223648116|gb|ACN10816.1| Antizyme inhibitor 1 [Salmo salar] Length = 449 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 74/379 (19%), Positives = 134/379 (35%), Gaps = 30/379 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + ++ + M YA++ANS+ AVI+ LA LG+G S+ EL Sbjct: 40 FFVADLGVLMRQHVRWRTHMPQM--RPFYAVQANSSLAVIEILAALGTGFICTSKYELEL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP+E I++SGV K + +I A ++GI ++E+EL+ + + +A Sbjct: 98 VQGYGVPSEDIIYSGVCKQLSQIKYAAKNGIDFLVCDNEAELRKIARCHPRAKLLLQVA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + FG + L A ++ GV HI S D + Sbjct: 157 ---------TEASSEGDEMGMAFGSKLKDCRHLLESAKEQGL-QVVGVRFHIPSSCDDPQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A R + G ++ +D+GGG + + S+ L + + Sbjct: 207 AYSHAVSDARCVFDMGEDIGFSMTLLDIGGGFNGSETQLKQINSAVR-PLLDLYFPASSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVIS----------------IKKSADKTFVILDVAMNDFM 312 I+ EPG + V+ L +I+ + + + D F Sbjct: 266 VSIMAEPGSYYVSSSFTLAVNIIAKEVGARDLHGNHDEPSPNDEPEFLYYMNDGVYGSFT 325 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + + + + + GP + D + + GD L G Sbjct: 326 SKLADNVIPAPALPKSGVSEDPVFASSLWGPSGDELDQVVDQCLLPELSVGDWLIFNNAG 385 Query: 373 AYGAVQSGTYNSRLLIPEI 391 AY T+ P Sbjct: 386 AYSLGPPSTFTESPRPPVY 404 >gi|304382240|ref|ZP_07364747.1| carboxynorspermidine decarboxylase [Prevotella marshii DSM 16973] gi|304336597|gb|EFM02826.1| carboxynorspermidine decarboxylase [Prevotella marshii DSM 16973] Length = 391 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 64/395 (16%), Positives = 113/395 (28%), Gaps = 26/395 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V TP Y + N + D V A KA + G S Sbjct: 9 AEVHTPIYILEEERLRTNLQLIARVAKEADVEVILAFKAFALWKTFPIFRAYIDGTTASS 68 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E A R T DEI + S S+ A + Sbjct: 69 LNEALLAYREF--GARAHTFSPAYTDDEIGEIARC-SDILTFNSLSQYCRYATAAKAAHP 125 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + RVNP+ + + + +FG+ ++ + Sbjct: 126 DVSLGLRVNPEYSEVGTALYNPCAEGTRFGVSADKLPE-----------HLPDGIEGFHC 174 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + L + Q ++ ++ GGG + P Sbjct: 175 HCHCESGADVFVRTLAHIETQFSPWFGQLKWMNFGGGHLMTRRDYDVPLLVETLRGF--- 231 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +ILEPG + G+LV++V+ I + IL+V+ M L Y Sbjct: 232 HRRYPHLHVILEPGSAFAWETGVLVSQVVDIVEDHGIKTAILNVSFTCHMPDCLEMPYQP 291 Query: 323 INYIVNPAGDRLHIH-------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 H + G C +GDF+ GD + E Y Sbjct: 292 AVRGAETLPPDAAAHCAPEAPVYRLGGNSCLSGDFMGSWLFERPLSVGDNVIFEDMLHYT 351 Query: 376 AVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 V++ +N +++ + ++R T+++ Sbjct: 352 TVKTHMFNGISHPSIALLHADGELEMLRV-FTYED 385 >gi|288941773|ref|YP_003444013.1| carboxynorspermidine decarboxylase [Allochromatium vinosum DSM 180] gi|288897145|gb|ADC62981.1| carboxynorspermidine decarboxylase [Allochromatium vinosum DSM 180] Length = 368 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 54/393 (13%), Positives = 102/393 (25%), Gaps = 32/393 (8%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 LA TP+Y + +++N + ALK S V + G Sbjct: 2 TDLA----TPYYLIDESRLQRNLEIIRQVRERSGAKSVLALKCFSTWCVFDLMRQYLDGT 57 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 S E R + S V ++ N + Sbjct: 58 TSSSLYEAR------------LGYETFGGETHAYSVGFSRDEVLAVREFADKLIFNSLSQ 105 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 +A + + + A A P +K Sbjct: 106 LRRFHPDVAGLNLGLRVNPGISYSNFDLADPARRYSRLGVSDKAALAEVAPWLKGLMFHF 165 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + + L L ++ H ++ + +GGGL Sbjct: 166 NCENPDVDNIRAS-----LETLGREYGELLHRMEWVSLGGGLSFTQDGYALDAFCEAL-- 218 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + ++ LEPG V LVT V+ + + +I + +Y Sbjct: 219 --RAFSRTFDIQVYLEPGEAAVTQSTELVTTVLDVVHNEVDIAIIDASLEAHMLDHLIYR 276 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + + + + G C GD + A + GD + I G Y V+ Sbjct: 277 THPRLA-----SPPPGEHRMMVAGRTCLAGDVFGDFKLAAPLQVGDEVRIADAGGYTMVK 331 Query: 379 SGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 +N + ++ +R + + Sbjct: 332 VNWFNGVAMPAIVVRRLDGTLERVRS-FGYDDF 363 >gi|125564562|gb|EAZ09942.1| hypothetical protein OsI_32240 [Oryza sativa Indica Group] Length = 371 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 111/363 (30%), Gaps = 56/363 (15%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + A D CYA+K N + A++ LA LG+G D S E+ Sbjct: 46 FHVFDLAKVVDLHRGWRRALP--DVRPCYAVKCNPDGAMLAALAALGAGFDCASRAEIEA 103 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V IV++ K ++ A + G+ +SE E+ + + Sbjct: 104 VLALGVRPATIVYANPCKPEAHLEYAAEVGVNLTTYDSEEEVAKVRR-----CHPRCELL 158 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 ++ K K + A P Sbjct: 159 LRIKAPDSGDAKVDLGLKYGANPDEAAREAFDAAAALGMPPM------------------ 200 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + +D+GGG D + +L + Sbjct: 201 -----------------------RVLDIGGGFMAGRTFDEAAAVINR--ALERHFGDLPC 235 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 ++I EPGR+ L +VI + + +D + + L D Y + Sbjct: 236 VEVIGEPGRYFAETAFTLAARVIGKRTRGELREYWIDDGLYGSLNCILMDHYVPRPRPLA 295 Query: 329 PAGDRLHIHAD------IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 A A + GP C++ D + ++ GD L + GAY + Sbjct: 296 AAAAGEDTTAATTHASTVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTAAGSNF 355 Query: 383 NSR 385 N Sbjct: 356 NGF 358 >gi|153207379|ref|ZP_01946116.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii 'MSU Goat Q177'] gi|120576688|gb|EAX33312.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii 'MSU Goat Q177'] Length = 396 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 64/376 (17%), Positives = 124/376 (32%), Gaps = 26/376 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P + + A+ + F F V YA+K N + VI+ + G D+ S E+ Sbjct: 17 PVFAFRPAALGRAVNYFCTQF---GGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEI 73 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + AE V + + + F+++ EL + + + Sbjct: 74 RIIKESAPGAELYFMHPVKSPHAIREAYFEYAVRHFSLDCLEELHKILRHTENAK----- 128 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + + +KFGI +H+ L + Sbjct: 129 --DLCLHLRLAIPNTFAEFNLAEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPD 186 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ---- 262 A+++ + ++ + GG + + PP+ + Y IH Sbjct: 187 ------AYRIAIRMADKVINEAQVEIESFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAK 240 Query: 263 -YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +++ EPGR LVA+ ++ V K ++ D P + + Sbjct: 241 VAQRHPGIQLLCEPGRSLVAESTSVIVNVELRKDDILYINDGTYGSLFDAGIP--HFIFP 298 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSG 380 D + GP C++ D++ + + GD + I + GAYG S Sbjct: 299 VHLLRPKHTADVDLLPFSFYGPTCDSLDYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLST 358 Query: 381 TYNSR-LLIPEIMVNG 395 +N IMV+ Sbjct: 359 AFNGFKQREGVIMVSD 374 >gi|85703337|ref|ZP_01034441.1| putative carboxynorspermidine decarboxylase protein [Roseovarius sp. 217] gi|85672265|gb|EAQ27122.1| putative carboxynorspermidine decarboxylase protein [Roseovarius sp. 217] Length = 364 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 108/390 (27%), Gaps = 40/390 (10%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP+Y + +N ALK + + T+ G S E Sbjct: 3 PTPYYLIDEQRLLQNMHKIERLRALSGAKALLALKCFATWSAFPTMQPYMDGTTSSSLFE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 LR + + S++E+ A + Sbjct: 63 LRLGR---------------------EKFGKETHAYSVAWSDAEIDDAVSYADKIIFNTV 101 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI----SGVDMHIG 201 +A + + + + ++ KI + + Sbjct: 102 GQLTRYDSQSAGIERGLRLNPRFSTSSFDLADPARPFSRLGEWDVDKILGVIDRISGVMI 161 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + F + L + + +Q + +GGG+ H A+ + Sbjct: 162 HYNCENSDFDLFDQQLARIEAEFAPVLERLQWVSLGGGI----HFTGDDYPLEKLAARLK 217 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + ++ LEPG + L V+ + + ++ + +Y Sbjct: 218 GFAERFGVQVYLEPGEAAITGSTTLEVTVLDLLDNGKDLAIVDSSTEAHMLDLLIYRESA 277 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 ++ + A +I G C GD R A GD + I T Y V+ Sbjct: 278 KLPQEGSHA-------YEICGKSCLAGDIFGEARFAAPLSIGDRISIADTAGYTMVKKNW 330 Query: 382 YNSRLLIPEIMVN--GSQFHIIRPRMTFQE 409 +N + I + +IR TF++ Sbjct: 331 FNGVNMPA-IAIRRPDGTVDLIRS-FTFED 358 >gi|323345634|ref|ZP_08085857.1| carboxynorspermidine decarboxylase [Prevotella oralis ATCC 33269] gi|323093748|gb|EFZ36326.1| carboxynorspermidine decarboxylase [Prevotella oralis ATCC 33269] Length = 417 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 70/388 (18%), Positives = 120/388 (30%), Gaps = 23/388 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + N + + D + A KA + S E R Sbjct: 41 PAYVAEERRLRHNLSIINKVAERADVEIILAFKAFALWKCFPIFREYIRATTASSLYEAR 100 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A+ FS + D+A S FN S+ E ++R I Sbjct: 101 LGFE-EFGAKTHTFSPAYTDYEINDIASYSSHLTFNSLSQYE--RFHKRVCKENPDISIG 157 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNP+ + + + +FGI A LP V VD + Sbjct: 158 LRVNPEYSEVSTDLYNPCSPGTRFGIT----------ADKLPAVLPKDVDGFHCHCHCES 207 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + + L + + ++ I+ GGG I + Sbjct: 208 GADVF-ERTLAHIEGKFSKWFPQLKWINFGGGHLITRKDYDIERLVYIL---QRFHARYP 263 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY-- 325 KIILEPG +G LV++V+ I + +L+V+ M L Y Sbjct: 264 NLKIILEPGSAFAWQIGSLVSQVVDIVEDQYIRTAVLNVSFTCHMPDCLEMPYMPNVRGA 323 Query: 326 ----IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 N + G C GDF+ + + + G+ + E Y V++ Sbjct: 324 EIVEESNVNDKAKEFLYRLGGNSCLAGDFMGMWQFDHELKVGENVIFEDMIHYTTVKTCM 383 Query: 382 YNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 +N ++ + I + +++ Sbjct: 384 FNGITHPSIVIAHDDGRLEILRQFGYED 411 >gi|254875409|ref|ZP_05248119.1| lysA1, diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] gi|254841408|gb|EET19844.1| lysA1, diaminopimelate decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] Length = 294 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 95/270 (35%), Positives = 139/270 (51%), Gaps = 6/270 (2%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP Y Y +E +L + + + YA+KAN N ++ G G+D VS G Sbjct: 23 TPCYIYDLELLEDTFLNAKKSLYKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 82 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E++RAL V ++ IVF+GVGK EI+LA+ + I+ FN ES E++ +NQ A K+ Sbjct: 83 EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 142 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY-ASTLPGVKISGVDMHIGSQ 203 I RVNP+I+A TH IS G+ +DKFGI I + + I G+ H+GSQ Sbjct: 143 NICLRVNPNIDAQTHHYISIGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 202 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP---SSSDYASLI 260 I + F + + LR N NI+HI+ GGGLGI Y + + P +A Sbjct: 203 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKV 290 + + + E GR LV G+LV++V Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQV 292 >gi|16124615|ref|NP_419179.1| ornithine decarboxylase [Caulobacter crescentus CB15] gi|221233304|ref|YP_002515740.1| ornithine decarboxylase [Caulobacter crescentus NA1000] gi|13421513|gb|AAK22347.1| ornithine decarboxylase, putative [Caulobacter crescentus CB15] gi|220962476|gb|ACL93832.1| ornithine decarboxylase [Caulobacter crescentus NA1000] Length = 419 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 107/360 (29%), Gaps = 14/360 (3%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P A+ F + F G V YA+KAN + VI+ LA G D+ S E+ Sbjct: 19 PVALVRPDAVAVAARWFQSEFKG---DVFYAVKANPSPWVIRELAKAGVRSFDVASLNEV 75 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + V G+ F+ ++ E L + + G+ + Sbjct: 76 ELVANEAPGSRMAFMHPVKSRAAISAAYFDHGVKTFSFDTHEE---LAKILDATGQAKDL 132 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 V + A +GK A+ + GV H+GSQ + Sbjct: 133 NLIVRMGVQAEGAAYSLSGKFG-----VEMHNAPDLLLAARRATQDLMGVSFHVGSQCMR 187 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 +F A + + + + + + Sbjct: 188 PTAFQAAMAQASRALVRAGVLADVVDVGGGFPSIYPGMVPPDLSEYLAAIDRGFAEMMVH 247 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ EPGR LVA+ L+ KV K A ++ D Sbjct: 248 ETTELWCEPGRALVAEASSLLVKVELKKGDALYLNDGSYGSLFDAAHMKWPFPVKLYRKS 307 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSR 385 + L GP C++ D + + GD + I GAYG + +N Sbjct: 308 GEVVEEGLK-PFRFYGPTCDSVDHMPGPFYLPESVDEGDYIEIGMLGAYGVAMNTRFNGF 366 >gi|224368165|ref|YP_002602328.1| LysA2 [Desulfobacterium autotrophicum HRM2] gi|223690881|gb|ACN14164.1| LysA2 [Desulfobacterium autotrophicum HRM2] Length = 410 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 83/391 (21%), Positives = 133/391 (34%), Gaps = 37/391 (9%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGSGLD 79 A V +P Y + + F AF+ T YA+K+N+ V + + G GLD Sbjct: 38 AKVHGSPLYLVEEAVLRERAGQFRAAFERQLPSTSFYYAMKSNNLSDVSRIVLGEGFGLD 97 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS-GIYCFNVESESELKTLNQRAV 138 + S EL AL A I+FSG GKT E++LA+++ ++S E + L Sbjct: 98 VSSGIELSTALGLG--ATDIIFSGPGKTDPELELAVENADRVTVLMDSPGECQRLMALVE 155 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 K+ + R+N T KFG+P+ + LY + GV Sbjct: 156 RRKKRLRVGLRLN----------HHTVGLWRKFGVPMEALLPLYETIKDHSYMAFKGVQF 205 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY--HSDHRPPSSSDY 256 H + L L + S + + ID+GGG + P Sbjct: 206 HSSWNLVPDRQVELIRILGDTLKKMPPSFFDDCEFIDIGGGYWPSQGEWLVSDDPLGHQM 265 Query: 257 ASLIHQYFGNLQ--------------CKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 +I EPGR++ D ++ +VI K V Sbjct: 266 IPASSIETFAQTLGQVIREKILSLGAFRICFEPGRWICNDAMHIIIQVIDKKA---PDLV 322 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 I D N Y + + + ++G +C D R Sbjct: 323 ITDAGTNAVGWERFETDYFPVINLTR--SGTMEKPCHVLGSLCTPHDVWGYAYFGQEIRE 380 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 D+L I GAY + + L +++ Sbjct: 381 KDILMIPTQGAYTFSLRQEFI-KPLPRVVVI 410 >gi|165918435|ref|ZP_02218521.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA 334] gi|165917803|gb|EDR36407.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA 334] Length = 396 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 64/376 (17%), Positives = 123/376 (32%), Gaps = 26/376 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P + + A+ + F F V YA+K N + VI+ + G D+ S E+ Sbjct: 17 PVFAFRPAALGRAVNYFCTQF---GGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEI 73 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R AE V + + + F+++ EL + + + Sbjct: 74 RIIKEYAPGAELYFMHPVKSPHAIREAYFEYAVRHFSLDCLEELHKILRHTENAK----- 128 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + + +KFGI +H+ L + Sbjct: 129 --DLCLHLRLAIPNTFAEFNLAEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPD 186 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ---- 262 A+++ + ++ + GG + + PP+ + Y IH Sbjct: 187 ------AYRIAIRMADKVINEAQVEIESFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAK 240 Query: 263 -YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +++ EPGR LVA+ ++ V K ++ D P + + Sbjct: 241 VAQRHPGIQLLCEPGRSLVAESTSVIVNVELRKDDILYINDGTYGSLFDAGIP--HFIFP 298 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSG 380 D + GP C++ D++ + + GD + I + GAYG S Sbjct: 299 VHLLRPKHTADVDLLPFSFYGPTCDSLDYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLST 358 Query: 381 TYNSR-LLIPEIMVNG 395 +N IMV+ Sbjct: 359 AFNGFKQREGVIMVSD 374 >gi|257458921|ref|ZP_05624041.1| carboxynorspermidine decarboxylase [Campylobacter gracilis RM3268] gi|257443625|gb|EEV18748.1| carboxynorspermidine decarboxylase [Campylobacter gracilis RM3268] Length = 384 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 111/389 (28%), Gaps = 24/389 (6%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TP Y + KN + + ALK + + + G Sbjct: 3 IDEISTPAYVCEEQKLVKNLEILRGVGERSGAKILCALKGFAFSFAMPYVDRYLWGATCS 62 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E + A E +S K D ++ S FN ++ + A Sbjct: 63 GLHEAKFAAEFIKNGEIHTYSPAFKEDDLDEILKISNHVVFNSAAQWQKYRAKALAAGAS 122 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + + + S + I + + G+ + Sbjct: 123 CGLRLNPQTSFAPKDAYNPCGSFSRLGMSLEALQRAILQDGEFLRGISGLHFHALCEE-- 180 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 S ++L + ++ ++ GGG I LI Sbjct: 181 -------SAQSLERVLEVFEAKFGKYFRALKWLNFGGGHHITRAGYDVEL----LIDLIK 229 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++ + +I LEPG + + G LV V+ I ++ K ++ + L Sbjct: 230 KFREKYEVEIYLEPGEAVGWECGYLVASVLDIVENGAKIAILDASSEAHMPDTVL----M 285 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIA------LNRKIALPRPGDLLYIEKTGAYG 375 V + G C GD + A GD + E Y Sbjct: 286 PYRPTVRGESESGKFSYRFGGNTCLAGDVAGLESGQPEYKFDAPLNIGDRVIFEDQIHYT 345 Query: 376 AVQSGTYNSRLLIPEIMVNG-SQFHIIRP 403 V++ T+N L ++ + + +I+ Sbjct: 346 IVKNTTFNGIKLPDLVLADERGEVLMIKK 374 >gi|299856844|pdb|3MT1|A Chain A, Crystal Structure Of Putative Carboxynorspermidine Decarboxylase Protein From Sinorhizobium Meliloti gi|299856845|pdb|3MT1|B Chain B, Crystal Structure Of Putative Carboxynorspermidine Decarboxylase Protein From Sinorhizobium Meliloti Length = 365 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 45/389 (11%), Positives = 106/389 (27%), Gaps = 39/389 (10%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + +N ++ + ALK + +V G S E+ Sbjct: 4 TPYYLIDKAKLTRNXERIAHVREKSGAKALLALKCFATWSVFDLXRDYXDGTTSSSLFEV 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + + ++E+ + A + + Sbjct: 64 RLGR---------------------ERFGKETHAYSVAYGDNEIDEVVSHADKIIFNSIS 102 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI----SGVDMHIGS 202 D A + + + + ++ K+ ++ Sbjct: 103 QLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVXDRINGFXIH 162 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + F + L ++ ++ + + + +GGG+ H +++ + Sbjct: 163 NNCENKDFGLFDRXLGEIEERFGALIARVDWVSLGGGI----HFTGDDYPVDAFSARLRA 218 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG + L V+ + ++ + +Y Sbjct: 219 FSDRYGVQIYLEPGEASITKSTTLEVTVLDTLYNGKNLAIVDSSIEAHXLDLLIY----- 273 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + I G C GD R + GD + + Y V+ + Sbjct: 274 -RETAKVLPNEGSHSYXICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTXVKKNWF 332 Query: 383 NSRLLIPEIMVN--GSQFHIIRPRMTFQE 409 N I + +R T+ + Sbjct: 333 NGVKXPA-IAIRELDGSVRTVRE-FTYAD 359 >gi|320355119|ref|YP_004196458.1| carboxynorspermidine decarboxylase [Desulfobulbus propionicus DSM 2032] gi|320123621|gb|ADW19167.1| carboxynorspermidine decarboxylase [Desulfobulbus propionicus DSM 2032] Length = 394 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 59/386 (15%), Positives = 113/386 (29%), Gaps = 19/386 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP + + N + + ALK + +V L + G+ S E Sbjct: 21 TPAFVVDEGLLADNLALLAQVKQATGCKILLALKCFAMFSVFPLLRQVLDGVCCSSPHEA 80 Query: 87 R-RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 R + I+++ + ++ + + A G++ Sbjct: 81 RLGREEFGREVHSFAAAYSEHDIEQLAVTSDHLVFNSFGQWQRFRSLAETTAKRTGRELK 140 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 RVNP+ + + GI + + + Sbjct: 141 FGLRVNPEHSEGATPIYDPCAPGSRLGIRRKDFRA-----------DLLDGISGLHWHNL 189 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + + + + + +I+ GGG I + Sbjct: 190 CEQDADCLQRTVAAVERNFAEVIPQMAYINFGGGHHITRPGYQLDLLIDIVGR----FQD 245 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + + G LV V+ + + D I+D ++ M L Y Sbjct: 246 RWGVQVYLEPGEAVALNAGYLVATVLDVVNA-DMPIAIIDASVPAHMPDVLEMPYRPHIV 304 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 AG++ I G C GD A PGD L Y V++ T+N Sbjct: 305 GSGEAGEKAW-TCRIGGLSCLAGDVAGEYSFDAELAPGDRLVFTDMAIYTMVKTNTFNGV 363 Query: 386 LLIPEIMVNGSQFHII-RPRMTFQEL 410 L + ++ R ++E Sbjct: 364 QLPSIMRYRPDDDELVLVRRFGYEEF 389 >gi|283953863|ref|ZP_06371393.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 414] gi|283794642|gb|EFC33381.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 414] Length = 382 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 51/397 (12%), Positives = 123/397 (30%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN + V ALK + +K + G Sbjct: 4 EKIQTPAYILEEDKLRKNCELLAMVGQKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 64 LWEAK---FAKEYMDKEIHTYSPAFKEDEIDEIASLSHHIVFNSLAQFHKFQAKTQKNSI 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + A L + +SG++ Sbjct: 121 GLRCNIEFSIAPKELYNPCGRYSRLGIR--------------AKDLENLDLSGIEGLHFH 166 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + + +L+ ++ ++ ++ GGG +H + +L Sbjct: 167 ALCEESADA-LEAVLKAFEEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLITLCKN 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV VI I ++ + ++ + + E Sbjct: 222 FSDKYGVQVYLEPGEAVGWQTGNLVASVIDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + A +++ G C GD + + GD + Sbjct: 282 VLNARILATRENEKKSELRENEFAYLLTGNTCLAGDIMGEYAFDKKLQIGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L ++++ ++ +IR ++++ Sbjct: 342 YTIVKNTTFNGIRLPNLMLLDHKNELQMIRE-FSYKD 377 >gi|221124530|ref|XP_002167271.1| PREDICTED: similar to Ornithine decarboxylase, partial [Hydra magnipapillata] Length = 296 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 70/333 (21%), Positives = 110/333 (33%), Gaps = 39/333 (11%) Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +K+N N VI LA LG D S+ E+ L V +RI+F+ K + A Sbjct: 1 VKSNPNPVVIALLARLGVNFDCASKCEIETVLDLGVNPDRIIFANPCKQESHVKYANTKN 60 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + +SE EL + + I ST K KFG + Sbjct: 61 VRKMTFDSEGELYKVKENFPGAELVLRIKVD----------DSKSTFKLGRKFGASLETT 110 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 L A L + GV H+G+ F+ A K D+ QQ + G +D+GG Sbjct: 111 QKLLQLAKDLDL-NVIGVSFHVGTGCYDAALFYNAVKSAADVFQQGDNIGFTFTLLDIGG 169 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 G + + I V +V + K+ Sbjct: 170 GFPGFKDETISMENFTLCC-------------------------NVISVKEVSNNDKNEQ 204 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + + D F + + + L + + GP C++ D I+ + Sbjct: 205 FMYYLNDGVYTSFKDVLFGKKFIPFL--LQESSTSLLFKSSLWGPTCDSTDCISEEIYLP 262 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 DLLY + GAY + +N P I Sbjct: 263 KLSVQDLLYFKNMGAYSTCFASKFNGFN-PPVI 294 >gi|212219056|ref|YP_002305843.1| ornithine decarboxylase [Coxiella burnetii CbuK_Q154] gi|212013318|gb|ACJ20698.1| ornithine decarboxylase [Coxiella burnetii CbuK_Q154] Length = 400 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 64/376 (17%), Positives = 124/376 (32%), Gaps = 26/376 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P + + A+ + F F V YA+K N + VI+ + G D+ S E+ Sbjct: 21 PVFAFRPAALGRAVNYFCTQF---GGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEI 77 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + AE V + + + F+++ EL + + + Sbjct: 78 RIIKESAPGAELYFMHPVKSPHAIREAYFEYAVRHFSLDCLEELHKILRHTENAK----- 132 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + + +KFGI +H+ L + Sbjct: 133 --DLCLHLRLAIPNTFAEFNLAEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPD 190 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ---- 262 A+++ + ++ + GG + + PP+ + Y IH Sbjct: 191 ------AYRIAIRMADKVINEAQVEIESFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAK 244 Query: 263 -YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +++ EPGR LVA+ ++ V K ++ D P + + Sbjct: 245 VAQRHPGIQLLCEPGRSLVAESTSVIVNVELRKDDILYINDGTYGSLFDAGIP--HFIFP 302 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSG 380 D + GP C++ D++ + + GD + I + GAYG S Sbjct: 303 VHLLRPKHTADVDLLPFSFYGPTCDSLDYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLST 362 Query: 381 TYNSR-LLIPEIMVNG 395 +N IMV+ Sbjct: 363 AFNGFKQREGVIMVSD 378 >gi|319406376|emb|CBI80017.1| carboxynorspermidine decarboxylase [Bartonella sp. AR 15-3] Length = 365 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 51/385 (13%), Positives = 114/385 (29%), Gaps = 31/385 (8%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + + KN T ++ V ALK + ++ ++ G S EL Sbjct: 4 TPYYLIDKSKLIKNMKTIAHLRAISGVKVLLALKCFATWSLFDIMSQYMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + + QR + K Sbjct: 64 RLGKEKFGKETHAYSVA-------WADDEIDEACSYADKIIFNSIQQLQRFANATKNIQR 116 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP I+A+ + + + G + ++ + + Sbjct: 117 GLRLNPGISASNFDLANPSRPFSRLGETNQDAIKKV----------LPLINGLLIHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 +F+ ++L + ++ + + + +GGG+ H D A + + Sbjct: 167 NSNFNLFNQMLNQIEEKFKDLFVAVDWVSLGGGI----HFTAENYPLEDLAERLKCFSQT 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + LEPG + L V+ + ++ + +Y Sbjct: 223 YGITVFLEPGEAAITKSTTLEVSVLDTLYNKKNLAIVDSSIEAHMLDLLIYR-------- 274 Query: 327 VNPAGDRLHIHAD--IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 N + H + + G C GD + + GD L + Y V+ +N Sbjct: 275 ENAKLEPNHGPYEIMVCGKSCLAGDIFGTFQFPKPLKIGDKLSFQDAAGYTMVKKNWFNG 334 Query: 385 RLLIPEIMVNGSQFHIIRPRMTFQE 409 + + + ++ + ++ + Sbjct: 335 VAMPAIVTKECNGVLTLQRKFSYND 359 >gi|171742109|ref|ZP_02917916.1| hypothetical protein BIFDEN_01215 [Bifidobacterium dentium ATCC 27678] gi|283456768|ref|YP_003361332.1| diaminopimelate decarboxylase [Bifidobacterium dentium Bd1] gi|171277723|gb|EDT45384.1| hypothetical protein BIFDEN_01215 [Bifidobacterium dentium ATCC 27678] gi|283103402|gb|ADB10508.1| diaminopimelate decarboxylase [Bifidobacterium dentium Bd1] Length = 524 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 24/252 (9%) Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGIAYH 245 +++ GV HIGS I ++F +A K + L + ++ + + +D+GGG +AY Sbjct: 272 HQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYT 331 Query: 246 SDHRPPSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-------- 290 D + +++ G I EPGR+ VA G+ + +V Sbjct: 332 DGEDSMDIDVELGRLADAVTTVNRALGMPAPVISFEPGRWTVAPTGVTLYRVGTVKPVRL 391 Query: 291 ------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 + ++ +V +D M+D +RP LY + + + N G +VG Sbjct: 392 NGDATDKAGNPVHERVYVSVDGGMSDNIRPALYGSDY-TARLANRKGSDDTKLCRVVGMH 450 Query: 345 CETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 CE+GD + ++ GD+L + TGAYG + YN L+ + + + H++ Sbjct: 451 CESGDIVVNEVRLPADITRGDILAVPVTGAYGRTMASNYNQALIPAVVGIGETDAHVMIR 510 Query: 404 RMTFQELIELDS 415 R + +L+ D Sbjct: 511 RQSIDDLLSWDV 522 Score = 96.8 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFS----NAFDGMDTMVCYALKANS 63 G + + E L +P Y T + F NAF+ T V +A KA Sbjct: 16 NGEITFHGRTAESLLDEFGSPLYVIDTDEVRARASKFVTSAGNAFNNTVTHVSFAGKALL 75 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ + + + G +D + GE+R ALAA VP R+V G K+ +EI LA++ G Sbjct: 76 SKEICRIVTEAGMLIDTCTMGEMRIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIV 135 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 V+ +E + A LGK+A + RV I+A H+ +ST ++ KFG+ + Sbjct: 136 VDEPNEPARIADIAKRLGKRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 187 >gi|324999534|ref|ZP_08120646.1| Orn/DAP/Arg decarboxylase 2 [Pseudonocardia sp. P1] Length = 422 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 73/382 (19%), Positives = 133/382 (34%), Gaps = 26/382 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 LA TPF + + + + AF D + YA+KA AV++ LA G+G D+ Sbjct: 53 LARPRPTPFLALDPQVVRERHAALAAAFG--DARILYAVKACPEPAVLRVLADAGAGFDV 110 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S+ E+ LAA + + A G+ F +S ++ L Sbjct: 111 ASQNEIALCLAAGADPASLQHGNPVRGPGAAARAAADGVRRFVTDSAEDVDALAAEVPGA 170 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + ++ +A + KFG + +L A+ L ++ +GV H Sbjct: 171 RVQVRLSVD-----DAGSATPFHG-----KFGALPGEAVALLRRAARLG-LEPAGVTFHA 219 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 GSQ + ++ +A + + +D+GGG + Y +D P A Sbjct: 220 GSQQTRPATYAEAVAVALRTAGRAGLRRP---ELDLGGGWPVTYRADVPGPGEFAAAVRA 276 Query: 261 HQYFGNLQCKI-----ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 + +LEPGR + G+L V+ + + + Sbjct: 277 AVAGAVAAGHVDGADLLLEPGRAIAGPAGVLRATVLRVSRRPGIDHRRWVYLDVGRYQGL 336 Query: 316 LYDAYHEINYIVNPAG-DRLHIHADIVGPICETGDFIALN--RKIA-LPRPGDLLYIEKT 371 I Y + G + GP C+ D I + GD++ + Sbjct: 337 AETEGEAIGYPLRVPGRSGPDGPCVLAGPTCDGDDVIYRRTPVALPGDLAAGDVVDLLHA 396 Query: 372 GAYGAVQSGT-YNSRLLIPEIM 392 GAY + + +N + ++ Sbjct: 397 GAYTSSYASVGFNGFGPLDVVV 418 >gi|254456075|ref|ZP_05069504.1| lysine/ornithine decarboxylase [Candidatus Pelagibacter sp. HTCC7211] gi|207083077|gb|EDZ60503.1| lysine/ornithine decarboxylase [Candidatus Pelagibacter sp. HTCC7211] Length = 394 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 69/375 (18%), Positives = 126/375 (33%), Gaps = 22/375 (5%) Query: 17 SLEKLAHVVQ--TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 S+E+L + ++ P YC +I+ F N F G + YA+K N + VIK + Sbjct: 6 SVEELVNQLKPEKPVYCIRKNSIQSATKFFKNKFPG---KILYAVKTNPHPVVIKQIIES 62 Query: 75 G-SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 G D+ S E++ A+ V + + I F+++++ EL + Sbjct: 63 GVDQFDVASIEEIKAIRKYSQTAKCSYMHTVKSRESIKEAYFKYEIKTFSLDTKDELIKI 122 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + + + + + + KFG + L Sbjct: 123 IESTNNAK-------DLELFVRVAVSNEHAEIDLSKKFGALSSEAAGLLRLVKQYSKKIG 175 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + + A + D+ ++ +I+VGGG Y Sbjct: 176 LSFHV----GSQCMHPISYAKGIS-DIGNIIKKTKIIPDYINVGGGFPTIYPDLIPQTME 230 Query: 254 SDYASLIHQYFG---NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + + + +II EPGR LVA+ G + KV KK + D Sbjct: 231 NYFNEIKKSLDNLKLENLPEIICEPGRALVAESGSTIIKVNLRKKQKLYINDGTYGTLFD 290 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIE 369 P + I N + D GP C++ D++ + + D + + Sbjct: 291 AGTPNIVFPSKMIKENTNKIISKKLTAFDFFGPTCDSMDYMKGPFLLPNNIKENDYIELG 350 Query: 370 KTGAYGAVQSGTYNS 384 + GAYG +N Sbjct: 351 QLGAYGLTFRTQFNG 365 >gi|281422911|ref|ZP_06253910.1| carboxynorspermidine decarboxylase [Prevotella copri DSM 18205] gi|281403041|gb|EFB33721.1| carboxynorspermidine decarboxylase [Prevotella copri DSM 18205] Length = 391 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 114/390 (29%), Gaps = 26/390 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + N + + D + A KA + S S E + Sbjct: 14 PIYVLEEERLRHNLSLIRSVAERADMEIILAFKAYALWKTFPIFREYISSTTASSLSEAK 73 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A + T EID Q S ++ + ++RA + Sbjct: 74 LAYHEF--GSKAHTFSPAYTDYEIDEIAQC-SSHLTFNSLTQYERYHERARRANSDIRLG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNP+ + + +FG+ ++ Sbjct: 131 LRVNPEYSEVGTLLYNPCAPGTRFGVSADKLPQTLPSDI-----------EGFHCHCHCE 179 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + ++ ++ I+ GGG + + + Sbjct: 180 SGADVFERTLAHIEEKFSPWFPQLKWINFGGGHLMTRKDYD---VEHLINIIKGFHQRYP 236 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 KII+EPG G LVT+V+ + + I++ + M L Y Sbjct: 237 HLKIIMEPGSAFGWQTGPLVTQVVDVVEDKGIRTAIINASFTCHMPDCLEMPYMPAVRNA 296 Query: 328 NP-------AGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 I G C +GDF+ + + G+ + E Y V++ Sbjct: 297 ETLEVDDPTKAPEGAHIYRIGGNSCLSGDFMGFWKFDHELQIGENVIFEDMLHYTTVKTN 356 Query: 381 TYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 T+N +V+ + +R ++++ Sbjct: 357 TFNGITHPSIGIVHLDGKLETLRD-FSYED 385 >gi|209363877|ref|YP_001424127.2| ornithine decarboxylase [Coxiella burnetii Dugway 5J108-111] gi|207081810|gb|ABS77454.2| ornithine decarboxylase [Coxiella burnetii Dugway 5J108-111] Length = 400 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 64/376 (17%), Positives = 123/376 (32%), Gaps = 26/376 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P + + A+ + F F V YA+K N + VI+ + G D+ S E+ Sbjct: 21 PVFAFRPAALGRAVNYFCTQF---GGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEI 77 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R AE V + + + F+++ EL + + + Sbjct: 78 RIIKEYAPGAELYFMHPVKSPHAIREAYFEYAVRHFSLDCLEELHKILRHTENAK----- 132 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + + +KFGI +H+ L + Sbjct: 133 --DLCLHLRLAIPNTFAEFNLAEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPD 190 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ---- 262 A+++ + ++ + GG + + PP+ + Y IH Sbjct: 191 ------AYRIAIRMADKVINEAQVEIESFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAK 244 Query: 263 -YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +++ EPGR LVA+ ++ V K ++ D P + + Sbjct: 245 VAQRHPGIQLLCEPGRSLVAESTSVIVNVELRKDDILYINDGTYGSLFDAGIP--HFIFP 302 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSG 380 D + GP C++ D++ + + GD + I + GAYG S Sbjct: 303 VHLLRPKHTADVDLLPFSFYGPTCDSLDYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLST 362 Query: 381 TYNSR-LLIPEIMVNG 395 +N IMV+ Sbjct: 363 AFNGFKQREGVIMVSD 378 >gi|320333520|ref|YP_004170231.1| carboxynorspermidine decarboxylase [Deinococcus maricopensis DSM 21211] gi|319754809|gb|ADV66566.1| carboxynorspermidine decarboxylase [Deinococcus maricopensis DSM 21211] Length = 393 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 114/378 (30%), Gaps = 18/378 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P + + +N D + A K + + T+ G S Sbjct: 18 QDLPSPAFVLDERRLLRNLELIKRVQDESGARMIVAFKGFAMWSTFDTVRDYVYGATASS 77 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + E V++ + D+ + FN S+ +Q + + Sbjct: 78 LNE-AILAREEMRKEVHVYAPAYSDAEFPDMLALADHITFNSFSQWARFK-DQVMAARAQ 135 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + + + + + G+ + + Sbjct: 136 GRHIGVGIRVNPEYAEVGTALYNPSMPYSRLGVTRAEFRPDLLDGVDGLHFHTLCEN--- 192 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++L Q ++ ++ GGG + L+ Sbjct: 193 ------DSSVLERVLEVFEQNFGEFLPQMKWVNFGGGHLMTREG----YDIERLIRLVKD 242 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +ILEPG G L++ V+ + +K VILDV+++ M L Y Sbjct: 243 FRERHDVDVILEPGSAYGWQTGWLISSVLDVV-RNEKDIVILDVSVSAHMPDVLEMPYRP 301 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + G+R H + G C +GD + A R GD + + Y V++ + Sbjct: 302 GILNASEPGERAH-TYLLGGTTCLSGDVVGEYSFDAPLRVGDRVIFDDMIHYTMVKTTFF 360 Query: 383 NSRLLIPE-IMVNGSQFH 399 N I Q+ Sbjct: 361 NGVKHPDIGIWTKDGQYR 378 >gi|189463104|ref|ZP_03011889.1| hypothetical protein BACCOP_03814 [Bacteroides coprocola DSM 17136] gi|189430083|gb|EDU99067.1| hypothetical protein BACCOP_03814 [Bacteroides coprocola DSM 17136] Length = 374 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 55/386 (14%), Positives = 111/386 (28%), Gaps = 27/386 (6%) Query: 34 TTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAP 93 + KN + + + A KA + SE E R A Sbjct: 3 EDLLRKNLSLIKSVAERAGVEIILAFKAFAMWKSFPIFREYIHYTTASSEYEARLAFEEF 62 Query: 94 VPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD 153 +S + S FN S+ E +A I Sbjct: 63 GSKAHT-YSPAYTETNFPAFLKYSSHITFNSLSQFERFYPQAKAYPEHVSCGIRVNPEY- 120 Query: 154 INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKA 213 + + + +FG+ + ++ S ++ Sbjct: 121 -SEVEVELYNPCAPGTRFGVTADLLPD-----------RLPEGIEGFHCHCHCESSSYEL 168 Query: 214 FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL 273 + L+ + ++ ++ +++GGG + L +Y +IIL Sbjct: 169 ERTLKHIEEKFSRWFPQLKWLNLGGGHLMTRKDYDVEHLIGLLKGLRERYPNL---QIIL 225 Query: 274 EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD- 332 EPG G LV V+ + +S ILDV+ M L Y Sbjct: 226 EPGSAFTWQTGPLVASVVDVVESRGIRTAILDVSFTCHMPDCLEMPYQPKVRNAETLPPD 285 Query: 333 ------RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 R + G C +GD++ + + G+ + E Y V++ +N Sbjct: 286 AVKTAAREDHVYRLGGNSCLSGDYMGSWKFDHELQIGERIIFEDMIHYTMVKTNMFNGIH 345 Query: 387 LIPEIMVN-GSQFHIIR--PRMTFQE 409 +++ + + + +++ Sbjct: 346 HPSVALLHTDGELEVYKTFRYEDYRD 371 >gi|154174242|ref|YP_001408907.1| carboxynorspermidine decarboxylase [Campylobacter curvus 525.92] gi|153793066|gb|EAT99910.2| carboxynorspermidine decarboxylase [Campylobacter curvus 525.92] Length = 380 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 120/392 (30%), Gaps = 30/392 (7%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++ + ++TP Y + N + D + ALK + V+ ++ G Sbjct: 2 NEILNDIKTPAYVCEEAKLRANLELLKHVKDESGAKILVALKGFALSGVMDMISRYLDGA 61 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 E + A + E +S K + ++ S FN ++ Sbjct: 62 TASGLYEAKFAKD-FIKGEIHTYSPAFKDEEIDEILSLSKHIVFNSLNQWRKFK----DK 116 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 +L R+NP+ +A+ + + + GI + L Sbjct: 117 ALASGISCGLRINPESSASPTDAYNPCARFSRLGITR----------ANLDKFDSLDGIE 166 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + ES +L ++ S ++ I+ GGG I + + Sbjct: 167 GLHFHALCEESAESLETVLMSFEEKFGSEISKMKWINFGGGHHITRADYNVQL----LIN 222 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 LI + ++ LEPG + G L+ V+ I + + + Sbjct: 223 LIKNFRDRYGVEVYLEPGEAVGWQTGFLIASVLDIV----ENEKNIAILDTSAEAHMPDT 278 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN------RKIALPRPGDLLYIEKTG 372 V G C GD + + + + GD + E Sbjct: 279 ILMPYRPAVRGESRSGKFSYRFGGNTCLAGDIVGQDAGNADYKFNEPLKIGDKVIFEDQI 338 Query: 373 AYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRP 403 Y V++ T+N L +++ + I+R Sbjct: 339 HYTIVKNTTFNGIKLPDLLLLKENGEIEILRK 370 >gi|295691122|ref|YP_003594815.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter segnis ATCC 21756] gi|295433025|gb|ADG12197.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter segnis ATCC 21756] Length = 419 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 111/360 (30%), Gaps = 14/360 (3%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P A+ F + F G V YA+KAN + VI+ LA G D+ S E+ Sbjct: 19 PVALVRPDAVSVAARWFQSEFKG---DVFYAVKANPSPWVIRELAQAGVRSFDVASLNEV 75 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + V G+ F+ ++ E L + + G+ + Sbjct: 76 ELVANEAPGSRMAFMHPVKSRAAIAAAYFDHGVKTFSFDTHEE---LAKILDATGQAKDL 132 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 V + A KFG+ H +L A+ + GV H+GSQ + Sbjct: 133 NLIVRMGVQAEGAAY----SLSGKFGVESHNAPALL-LAARRATQDLMGVSFHVGSQCMR 187 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 +F A + + + + + + Sbjct: 188 PTAFQAAMAQASRALVRAGVLADVVDVGGGFPSIYPGMVPPDLSEYLAAIDRGFAEMMVH 247 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ EPGR LVA+ L+ KV K A ++ D Sbjct: 248 ETTELWCEPGRALVAEASSLLVKVELKKGDALYLNDGSYGSLFDAAHMKWPFPVKLFRKN 307 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSR 385 + L GP C++ D + + GD + I GAYG + +N Sbjct: 308 GEVVEEGLK-PFRFYGPTCDSVDHMPGPFYLPESVDEGDYIEIGMLGAYGVAMNTRFNGF 366 >gi|307702981|ref|ZP_07639928.1| protein tabA [Streptococcus oralis ATCC 35037] gi|307623374|gb|EFO02364.1| protein tabA [Streptococcus oralis ATCC 35037] Length = 321 Score = 114 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 66/315 (20%), Positives = 107/315 (33%), Gaps = 12/315 (3%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKT 70 LE + TPF+ Y I + + AF +A+KA A++K Sbjct: 5 FISREDLETIVAEFPTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKI 64 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 L G G+D S EL + P I+FS E A + G Sbjct: 65 LKEEGCGVDCSSYVELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDA----F 120 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + G I+ R NP I E KFG+ Q+ +A Sbjct: 121 EDIEHLERAAGIPEIISCRYNPGGVFELGTDIMDNPGEAKFGMTKDQLFEAFAILKEKGA 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + + + A +L + G ++ I++ GG+G+ Y D P Sbjct: 181 KTFGIHSFLASNTVTHLYYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEP 240 Query: 251 PSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + + Q KI E GRF++A G LVT+V KK + Sbjct: 241 NDIAVIGEGVRKVYEEVLTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKPTVPIWAW 300 Query: 304 LDVAMNDFMRPTLYD 318 + P + Sbjct: 301 MHQQSTSCAPPCMEP 315 >gi|62259046|gb|AAX77838.1| unknown protein [synthetic construct] Length = 329 Score = 114 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 95/275 (34%), Positives = 140/275 (50%), Gaps = 6/275 (2%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP Y Y +E +L + + + YA+KAN N ++ G G+D VS G Sbjct: 49 TPCYIYDLELLEDTFLNAKKSLYKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 108 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E++RAL V ++ IVF+GVGK EI+LA+ + I+ FN ES E++ +NQ A K+ Sbjct: 109 EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 168 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY-ASTLPGVKISGVDMHIGSQ 203 I RVNP+I+A TH IS G+ +DKFGI I + + I G+ H+GSQ Sbjct: 169 NICLRVNPNIDAQTHHYISIGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 228 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP---SSSDYASLI 260 I + F + + LR N NI+HI+ GGGLGI Y + + P +A Sbjct: 229 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 288 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 + + + E GR LV G+LV++V+ Sbjct: 289 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFYPY 323 >gi|218779354|ref|YP_002430672.1| Orn/DAP/Arg decarboxylase 2 [Desulfatibacillum alkenivorans AK-01] gi|218760738|gb|ACL03204.1| Orn/DAP/Arg decarboxylase 2 [Desulfatibacillum alkenivorans AK-01] Length = 390 Score = 114 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 57/390 (14%), Positives = 113/390 (28%), Gaps = 36/390 (9%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + TP + Y+ IEKN + + ++ N V+K L G D+ + Sbjct: 16 ELDTPCFVYNLDIIEKNIQKLRQVLR--PDKILFGVRCNPLPQVLKILHQNQCGFDVGNP 73 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 EL + + + G F+ +S S+++ L A + Sbjct: 74 AELEYVKQVAGDGADCFNGCPIASAESVKEMYAQGFRIFSADSASQVENLAANAPNAKVL 133 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 ++ + A++H+ ++ S P Sbjct: 134 IRVSSSNAGSVIADSHRLGVEESHANRLLDYAATRGLEVCGLSFHP-------------- 179 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ- 262 + +K +L +++ + + GG Y + A Sbjct: 180 -GSQCGNLENWKAGISTCARLAREYPSLKILHIAGGFPALYQGSAPDACTVADAIRQAIG 238 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + ++P RFL AD + +T + +S + +D ++ L Sbjct: 239 KYYPFTPVLWMQPSRFLTADAAVTLTTAVHTDESCYPRRLFVDASVFAGHGEILTMNNRL 298 Query: 323 INYIVNPAGDRLHIHADIVGPICETG--DFIALNRKIALPRPGD--------LLYIEKTG 372 I A H + G C + D A + + R D + I G Sbjct: 299 QYPICGLAPASRFYHYQVHG--CTSSGVDTFAADALLPEVRV-DHVNPSRSSRIVICNAG 355 Query: 373 AYGAVQ-----SGTYNSRLLIPEIMVNGSQ 397 AY A +N + G + Sbjct: 356 AYCASFVRNSVRTGFNGSKAPGLYFLKGEE 385 >gi|296283679|ref|ZP_06861677.1| Orn/DAP/Arg decarboxylase 2 [Citromicrobium bathyomarinum JL354] Length = 400 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 113/364 (31%), Gaps = 12/364 (3%) Query: 49 DGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKT 107 DG YA+KAN + +I+ L G D+ S E+R AE V Sbjct: 37 DGFRGRALYAVKANPSPDLIRILWDNGITHYDVASIAEVRLVRGLLPDAELCFMHPVKPR 96 Query: 108 IDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK 167 + Q G F+++SE EL + + ++ + ++ S Sbjct: 97 SAIAEAYHQHGCRTFSLDSEEELAKIVDACRAPDGSPAKDLKLLVRLRVSSE--FSELSL 154 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 KFG + L T GV H+GSQ ++ +A + R Sbjct: 155 ASKFGTDLIDAPVLLQQ--TRQHCDWLGVCFHVGSQAMTPFAYVQALERARAAIASSSVV 212 Query: 228 GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 I + + ++ EPGR L A+ L+ Sbjct: 213 IDIIDVGGGFPSIYPGMEPPPLEDYFDVIFRASESLPISYSAELWCEPGRALCAEYSSLL 272 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 KV + T + ++ + + + + + GP C+ Sbjct: 273 AKVEKRR----GTELYINDGAYGALYDAAHLGWKFPVRALGHDEHAASEDFSLYGPTCDD 328 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIR--PR 404 D++ + + GD + I GAYGA +N I+V + R Sbjct: 329 ADYMEGPFALPADIKAGDYVEIGMLGAYGAAMKTDFNGFGANMAIVVGDDPMQTLYDGRR 388 Query: 405 MTFQ 408 + Sbjct: 389 ERPE 392 >gi|326917946|ref|XP_003205254.1| PREDICTED: antizyme inhibitor 1-like [Meleagris gallopavo] Length = 450 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 116/362 (32%), Gaps = 32/362 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + K + + N Y ++ NS V++ L LG G S+ E+ Sbjct: 40 FYVGDLGKLVKKNIQWQNVMA--PIKPFYTVRCNSTPGVLEILGTLGIGFACSSKSEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + E I+++ K +I A ++GI +S+ ELK + + IA Sbjct: 98 VQGLGISPENIIYTNPCKQASQIKYAAKAGINIMTCDSDIELKKIARNHPDAKLLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + L A L +I GV H+ +++ Sbjct: 157 ---------TEDITADEEMNMKFGTTLKNCRHLMECAKELGV-QIVGVKFHVSGSCKELQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A R + G + +D+GGG + L + Sbjct: 207 TYIHAISDARCVFDMAEEFGFKMNMLDIGGGFTGSELQLEEVNHVIR-PLLDVYFPKESG 265 Query: 269 CKIILEPGRFLVADVGILVTKVIS------------------IKKSADKTFVILDVAMND 310 ++I EPG + V+ L +I+ T+ I D Sbjct: 266 IEVIAEPGCYYVSSAFTLAVNIIAKKAVDCDKLLPSGVEQARNDDEPVFTYYINDGVYGS 325 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 F D + + GP C+ D I N + GD L + Sbjct: 326 FASKLSEKLNTNPEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELSVGDWLIFDN 385 Query: 371 TG 372 G Sbjct: 386 MG 387 >gi|319899498|ref|YP_004159595.1| carboxynorspermidine decarboxylase [Bartonella clarridgeiae 73] gi|319403466|emb|CBI77046.1| carboxynorspermidine decarboxylase [Bartonella clarridgeiae 73] Length = 365 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 51/385 (13%), Positives = 115/385 (29%), Gaps = 31/385 (8%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + + KN T ++ V ALK + ++ ++ G S EL Sbjct: 4 TPYYLIDKSKLIKNMKTIAHLRAISGVKVLLALKCFATWSLFDVMSQYMDGTTSSSLYEL 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + + QR + K Sbjct: 64 RLGKEKFGKETHAYSVA-------WADDEIDEACSYADKIIFNSIQQLQRFANATKTIQR 116 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP I+A+ + + + G + ++ + + Sbjct: 117 GLRLNPGISASNFDLANPSRPFSRLGETNQDAIKEV----------LPFINGLMIHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F+ ++L + ++ + + + +GGG+ H D A + + Sbjct: 167 NSDFNLFNQMLNQIEEKFKELFIAVDWVSLGGGI----HFTAENYPLEDLAERLKCFSQI 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + LEPG + L V+ + ++ + +Y Sbjct: 223 YGVTVFLEPGEAAITKSTTLEVSVLDTLYNKKNLAIVDSSIEAHMLDLLIYR-------- 274 Query: 327 VNPAGDRLHIHAD--IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 N + H + + G C GD + + GD L + + Y V+ +N Sbjct: 275 ENAKLEPNHGPYEIMVCGKSCLAGDIFGTFKFPEPLKIGDKLSFQDSAGYTMVKKNWFNG 334 Query: 385 RLLIPEIMVNGSQFHIIRPRMTFQE 409 + ++ + ++ + ++ + Sbjct: 335 VAMPAIVIKECNGTLTLQRQFSYND 359 >gi|84515479|ref|ZP_01002841.1| NspC, carboxynorspermidine decarboxylase [Loktanella vestfoldensis SKA53] gi|84510762|gb|EAQ07217.1| NspC, carboxynorspermidine decarboxylase [Loktanella vestfoldensis SKA53] Length = 364 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 55/391 (14%), Positives = 115/391 (29%), Gaps = 39/391 (9%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y + + +N S + ALK + +V +A G S E Sbjct: 2 QTPYYLIDKSCLLRNLEKISWLREASGVKCLLALKCFATWSVFDFMAEHMDGSTSSSLYE 61 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R P E +S ++ E+ + + + + Sbjct: 62 VRLGRE-KFPGETHAYSV--------------------AYADHEIAQVLAYSDKIIFNSI 100 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI----SGVDMHIG 201 D + + + + ++ KI + + Sbjct: 101 GQLAKFNDASQGHVRGLRVNPGVSTSEFDLADPARPFSRLGEHDPAKIAAVADQISGLMF 160 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + +SF + ++L + + + H + I +GGG+ H + A + Sbjct: 161 HNNCENDSFARFDEMLTLIEDRFGAIIHKMAWISLGGGI----HFTGADYPLENLALRLK 216 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 ++ ++ LEPG + L V+ + ++ + +Y Sbjct: 217 EFSQKFGVQVYLEPGEAAITGAATLEVTVLDTMHNGKNLAIVDSSIEAHLLDLLIY---- 272 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 A + I G C GD A + GD L + T Y V+ Sbjct: 273 --REPAKIAPNTGAHEWMICGKSCLAGDIFGEFLFDAPLKAGDRLSFQDTAGYTMVKKNW 330 Query: 382 YNSRLLIPEIMVN--GSQFHIIRPRMTFQEL 410 +N + I + ++R + + Sbjct: 331 FNGVKMPS-IAIRELDGTTRLVRD-FDYDDF 359 >gi|86138608|ref|ZP_01057181.1| Putative Ornithine decarboxylase [Roseobacter sp. MED193] gi|85824668|gb|EAQ44870.1| Putative Ornithine decarboxylase [Roseobacter sp. MED193] Length = 383 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 68/379 (17%), Positives = 128/379 (33%), Gaps = 26/379 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGEL 86 P +S + + F FDG +V YA+KAN +QAV+ L G D+ S E+ Sbjct: 23 PILYFSPRVLHQVAERFQAGFDG---LVTYAVKANPHQAVLSNLVAAGISAFDVASPAEM 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A A + ++ +++ E+D + + ++V+ SEL L + + I Sbjct: 80 AAVRLASPDA-VMHYNNPVRSMAEVDAGIAHDVASWSVDECSELDKLVEV----PRDKEI 134 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A R + + KFG + +L + + Sbjct: 135 AVRFALPVEGAAYDF------GSKFGAAPQEAIALLKRVEAEGWTPALCFHPGTQCEDPR 188 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ--YF 264 + Q+ ++VGGG A F Sbjct: 189 AWVEYIHAAKRIVDAAQVPIA-----RLNVGGGFAANRDGVAPDLERVFAAIQEAVVAAF 243 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN-DFMRPTLYDAYHEI 323 G ++I EPGR +V++ L ++ ++K + F+ + +R E+ Sbjct: 244 GADHPQLICEPGRAMVSESFTLAARIKGMRKGGEMVFLNDGIYGGLVDIRDMGLPGRVEV 303 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTY 382 + + GP C++ D + + + GD + GAY + S + Sbjct: 304 VGADGRHREAGRSPRVVFGPTCDSLDRLPDGLPLPDDTQAGDYVLFPGLGAYSSAMSTQF 363 Query: 383 NSRLL--IPEIMVNGSQFH 399 N L + ++ Q Sbjct: 364 NGYGLSDVATVIELSGQAR 382 >gi|145529756|ref|XP_001450661.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124418283|emb|CAK83264.1| unnamed protein product [Paramecium tetraurelia] Length = 888 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 74/384 (19%), Positives = 145/384 (37%), Gaps = 26/384 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGELR 87 F Y++ ++ ++ + YA+K+N + +I+ + + G D S+GE++ Sbjct: 503 FMIYNSNELKNKVNSWKQTLPWITP--YYAIKSNPIEPLIQDIINGPFGTFDCASKGEIQ 560 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + VPA ++V+S K +I A G+ + +S EL + + A + ++ Sbjct: 561 MVMKYGVPASKLVYSNPVKEEKDIYYAKNKGVQITSADSIDELIKIQKIAPEMKILWRLS 620 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + N + + + +P G+++ G+ H GS + Sbjct: 621 I-----VEENPEQMATLFSGKFGDDVPNLDAAHKRFKQIQQMGIQLHGIHFHCGSAVQGS 675 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 SF KA L ++ + R GH ++ +DVGGG + +L L Sbjct: 676 SSFGKAIDLAQECMRIGRLYGHKMELLDVGGG------FPTGNIHENAINALKKTQNDPL 729 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 ++I EPGR A+ L+ ++++ + + ++ ++ L D N Sbjct: 730 GYQVIAEPGRHFSANTCSLLFRIMTKRIKHGRLCYHVNESLYHSFNCILMDGISFENQND 789 Query: 328 NPAG-----------DRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYG 375 G + I G C+ D IA N + + GD L ++ G+Y Sbjct: 790 QFYGVLNSDESQNSQISEQSNVSIFGMTCDGADIIAKNMVVPNDLQVGDWLCMQGMGSYT 849 Query: 376 AVQSGTYNSRLLIPEIMVNGSQFH 399 T+N +I Q Sbjct: 850 VGPKSTFNGMKSTAKIYQWSGQIE 873 >gi|291525897|emb|CBK91484.1| Diaminopimelate decarboxylase [Eubacterium rectale DSM 17629] Length = 434 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 77/416 (18%), Positives = 141/416 (33%), Gaps = 53/416 (12%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTM---VCYALKANSNQAVIKTLAHLGSGLDIVS 82 QTP+Y + T K A D +C+++KAN ++ L +++ S Sbjct: 3 QTPYYVFDTDEFAKRAAMIRAALDCKGGRRIPLCFSIKANP--FLLHRLPEGLDHVEVCS 60 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GEL +A V E I++SGV K +I+ A+ G ES +++ + + Sbjct: 61 PGELEICIALGVKPESIIYSGVMKEKCDIERAVSYGAGILTCESIRHAALISEVMLECIQ 120 Query: 143 KAPIAFRVNPDINANTHKKISTG-KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + A T + ++FG+ + I + ++ G+ + G+ + G Sbjct: 121 E-----GAHEAEFAETKAHVILRLTSGNQFGMSLEDIEYIISHPDEFKGIAVMGIHYYSG 175 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 +Q + K+ LT G Q ++ G GL + Y + Sbjct: 176 TQKSLRKINKDLEKIKSALTGLKEKYGFEPQLVEYGPGLCVEYFEEDWQEKEKQSLDEAA 235 Query: 262 Q--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + + + +E GRFL A G T+V +K + D + ILD ++ A Sbjct: 236 EVLREFAEEYPLGIEMGRFLAASCGKYYTQVKDLKSTGDANYAILDGGIHHLNYFGQRMA 295 Query: 320 YHEINYIVNPAGDR---------------------------------------LHIHADI 340 + A + + Sbjct: 296 MQVPPISIYRADEIYFGEKLGEIKGTAGPIGNTFNDCEVSENEERTEEELTQLPDTDYTL 355 Query: 341 VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNG 395 G +C D + K+ GD+L GAY ++ + SR L + Sbjct: 356 CGSLCTVADVLVREVKLKKLELGDVLEFGHCGAYSVTEAPALFLSRQLPAIYAYSK 411 >gi|153952120|ref|YP_001398814.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. doylei 269.97] gi|152939566|gb|ABS44307.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. doylei 269.97] Length = 382 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 50/397 (12%), Positives = 119/397 (29%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN ++ + V ALK + +K + G Sbjct: 4 ENIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 64 LWEAK---FAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSL 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + S + Sbjct: 121 GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSAIEGLHFHALCE---------- 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ ++ ++ ++ GGG +H + +L Sbjct: 171 -----ESADALETVLKAFEEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLIALCKN 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV V+ I ++ + ++ + + E Sbjct: 222 FSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLHIHADI---------VGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + A +D+ G C GD + + GD + Sbjct: 282 VLNTRILATRENEKISDLKENEFAYLLTGNTCLAGDVMGEYAFNKKLKIGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V++ T+N L ++++ ++ +IR ++++ Sbjct: 342 YTIVKNTTFNGIRLPNLMLLDHKNELQMIRE-FSYKD 377 >gi|332971104|gb|EGK10071.1| carboxynorspermidine decarboxylase [Psychrobacter sp. 1501(2011)] Length = 377 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 56/389 (14%), Positives = 110/389 (28%), Gaps = 25/389 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y A+++N + ALK + V + G S E+ Sbjct: 4 TPYYQIDVAALKQNLEIVQRLCELSGAKALLALKCFATWGVFDEMKPYLHGTTSSSLNEV 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R E +S + ++ + FN ++ + Sbjct: 64 RLGKE-EFGGETHAYSVAYGADEIDEVLTYADKIIFNSFNQLHAFKDKAK---------- 112 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 D+ T P L + I + + + Sbjct: 113 ----AQDVPVGLRINPKTSNSSFIIADPARPFSRLGEHDIDKIKPVIKDITGVMIHNNCE 168 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 +SF L D+ + + ++ + +GGG+ H A+ + + Sbjct: 169 NDSFEAFSASLEDIETKFGELFYQLEWVSLGGGI----HFIAPDYPLEKLAARLKDFSEK 224 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +I LEPG + D LVT V+ + V+ + +Y + I Sbjct: 225 YGVQIYLEPGEACIHDAAKLVTTVLDTLHNGKPLAVVDASIEAHMLDLLIYRETAPLVQI 284 Query: 327 VNPAGDRLHIHAD----IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + D I G C GD GD + Y V+ + Sbjct: 285 NEQSCHMTSQQTDDSTIIYGKSCLAGDIFGEYALEKPLSIGDKVAFGNAAGYTMVKKNWF 344 Query: 383 NSRLLIPEIMVNGSQFHI-IRPRMTFQEL 410 N + + + Q + ++ +++ Sbjct: 345 NGVAMPSIV-ICDEQGELKVQKTFGYEDF 372 >gi|163761098|ref|ZP_02168175.1| ornithine decarboxylase [Hoeflea phototrophica DFL-43] gi|162281649|gb|EDQ31943.1| ornithine decarboxylase [Hoeflea phototrophica DFL-43] Length = 417 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 64/369 (17%), Positives = 116/369 (31%), Gaps = 21/369 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGEL 86 P YC+ ++++ F F G YA+K N V+KTL G D+ S GE Sbjct: 30 PLYCFRPDVLKQDARQFMKLFPGETA---YAVKTNGEPMVLKTLVEAGVKIFDVASPGEF 86 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS-LGKKAP 145 AA AE + V D GI +++ E E+ + + + A Sbjct: 87 EAVRAASPDAEMLYMHPVKAQSDIRLALETYGIRVMSLDHEDEIAKVLRIVRALDLDPAS 146 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I V + + KFG L + G+ H+GSQ++ Sbjct: 147 ITIFVRLQTKGHAM-----YELSKKFGAAPGHAVELVQRLDRIGFK--VGLCFHVGSQVE 199 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-----SDYASLI 260 + +S+ +A K + + N + + + P Sbjct: 200 EPDSYEQALKSADWVRNRAGVNLVGLDVGGGFPAVYGHDPNRKAKPMPPLEELMGDLRAN 259 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKV---ISIKKSADKTFVILDVAMNDFMRPTLY 317 + + ++ EPGR +VA L+ +V + + Sbjct: 260 IKEWAFDDMPLVAEPGRVVVARAFSLIVRVLLRKGRRLYINDGIWASLSDSWTGKITLPA 319 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGA 376 + + + + G C++ D ++ + GD + I GAY Sbjct: 320 RFIPDPARKIRKGKAGTVVPFRVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSL 379 Query: 377 VQSGTYNSR 385 +N Sbjct: 380 SLRTRFNGF 388 >gi|90418219|ref|ZP_01226131.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1] gi|90337891|gb|EAS51542.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1] Length = 406 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 99/366 (27%), Gaps = 15/366 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGEL 86 P YC+ + + F AF G YA+K N V++TL+ G D+ S GE Sbjct: 19 PVYCFRPAVLTADAERFMAAFPGDTA---YAVKTNGEPMVLETLSRAGVRIFDVASPGEF 75 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 AA AE + V D GI +++ E E+ + + +L Sbjct: 76 EAVRAAQPDAEMLYMHPVKAQSDIRLALETYGIRVMSLDHEDEVVKILRVVRALDLDPGK 135 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + KFG L + + + Sbjct: 136 ITLFIRIQTKGSAAY----ELSKKFGAAPAHAVELLQRCHRIGFKVGICFHVGSQIEDPD 191 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL---IHQY 263 A + G ++ P + + Sbjct: 192 TYERALASADWVRNRADVPLAGIDVGGGFPAEYGHDPRRRKKEMPGFGAIMTRLTADMEE 251 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKV---ISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 +G ++ EPGR +VA L+ +V + + Sbjct: 252 WGFSDMPMVAEPGRVVVARAFSLIVRVLLRKGKRLYINDGIWASLSDSWTGKITLPARFI 311 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQS 379 + + G C++ D ++ + GD + I GAY Sbjct: 312 PDPARQSRNGDPANIQAFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLR 371 Query: 380 GTYNSR 385 +N Sbjct: 372 TRFNGF 377 >gi|311747334|ref|ZP_07721119.1| arginine decarboxylase, biosynthetic [Algoriphagus sp. PR1] gi|311302638|gb|EAZ83215.2| arginine decarboxylase, biosynthetic [Algoriphagus sp. PR1] Length = 462 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 62/441 (14%), Positives = 128/441 (29%), Gaps = 31/441 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM---- 54 F L V++ ++ TP I +N F+NA D Sbjct: 18 EFHVENNELFFNGVNMMEIIEEYGTPLKLTYLPKISENIQKAKTYFNNAIQAHDYQGKYT 77 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 CY K++ V+ ++ S ++ + + + + + DL Sbjct: 78 YCYCTKSSHFSFVLDEALKNDIHIETSSTFDIPLVRSLYAKGKITKNTFIICNGFKRDLY 137 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 Q N + + L+ + + I ++ G + G+ Sbjct: 138 KQYIAELLNDGFVNCVPILDNLSEIDYYLEHVKVPFQVGIRIAADEEPKFGFYTSRLGVR 197 Query: 175 IHQIHS-LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 + I P V + + I S I + L+ + Sbjct: 198 YNDIIKLYEEKIKDHPLVSLKMLHFFINSGIKDTAYYWSELTRFIQKYVDLKKVAPTLDT 257 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL------QCKIILEPGRFLVADVGILV 287 +D+GGG I + ++ + I E G F V + G ++ Sbjct: 258 MDIGGGWPIKTNVFFDYDYQYMADQIVKNIKWMCAKNNTTEPNIFTEFGSFTVGESGAVL 317 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 V+ K DK + P + + + D + + ++ G C++ Sbjct: 318 YSVLDEKLQNDKELWYMIDGSFITQLPDSWGLNQKYIMLAINNWDETYHNINLGGLTCDS 377 Query: 348 GDFIAL-----NRKIALPRPG--DLLYIEKTGAYGAVQSG----TYNSRLLIPEIMVNGS 396 D+ N + P G L TGAY G + ++++ Sbjct: 378 MDYYNSEAHQFNIYLPKPDNGKKQYLGFFHTGAYQESLGGYGGIQHCLIPAPKHVLIDRD 437 Query: 397 Q-----FHIIRPRMTFQELIE 412 + + R T + +++ Sbjct: 438 EDGKVVHRLFREDQTEESMLK 458 >gi|307565290|ref|ZP_07627783.1| carboxynorspermidine decarboxylase [Prevotella amnii CRIS 21A-A] gi|307345959|gb|EFN91303.1| carboxynorspermidine decarboxylase [Prevotella amnii CRIS 21A-A] Length = 394 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 116/386 (30%), Gaps = 21/386 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + KN +N + + A KA + + S E R Sbjct: 20 PMYVLEEDKLRKNLSLIANIANKASVEIILAFKAYALWKTFPIFREYINATTASSLNEAR 79 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L FS + D+ S FN + E L RA + I Sbjct: 80 LGLEEFGTPCHT-FSPAYTDYEIKDIVKCSSHLTFNSLQQYERYHLKARAYNKKISLGIR 138 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + + + + K+ Sbjct: 139 VNP-------------EYSEIKTLLYNPCAPGTRFGILAKNIPEKLPSDIEGFHIHCHCE 185 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + ++ ++ I+ GGG + + + + + + Sbjct: 186 NGSDVFERTLAHIEEKFAVWFSQLKWINFGGGHLMTHANYNIDKLINIL---QGFHNRYP 242 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY-- 325 K+ILEPG VG LV++V+ I + IL+V+ M L Y+ I Sbjct: 243 WLKVILEPGSAFGWQVGTLVSQVVDIIEDRGYRTAILNVSFTAHMPDCLEMPYNPIVRGA 302 Query: 326 --IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 N + G C +GD++ + + G+ + E Y V++ T+N Sbjct: 303 ETQPNSGKTTDPFTYRLGGNSCLSGDWMGNWKFDHKLQIGENIIFEDMLHYTTVKTNTFN 362 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 +++ ++ I ++++ Sbjct: 363 GISHPAIALLHSNKDLEILRTYSYED 388 >gi|223038998|ref|ZP_03609289.1| carboxynorspermidine decarboxylase [Campylobacter rectus RM3267] gi|222879637|gb|EEF14727.1| carboxynorspermidine decarboxylase [Campylobacter rectus RM3267] Length = 379 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 52/392 (13%), Positives = 103/392 (26%), Gaps = 31/392 (7%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++ ++TP Y + KN D V ALK + V+ + G Sbjct: 2 NEILSKIKTPAYVCEEAKVRKNLEILKRVKDESGAKVLVALKGFAFSGVMGLVGEYLDGA 61 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 E + A E +S K D ++ S FN ++ A Sbjct: 62 TCSGLYEAKFAAKYAR-GEIHTYSPAFKDEDIDEVLALSRHVVFNSFAQWAKFKQKALAA 120 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + ++ + + + Sbjct: 121 GVTCGLRVNPELSVAPTDAYNPCGRYSRLGITRANFDADALEGITGLHFHALCE------ 174 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 ES +L ++ ++ ++ GGG + + Sbjct: 175 ---------ESAQSLETVLMAFEEKFGEFIPRMKWVNFGGGHHVTKEGYDVDL----LIN 221 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 LI + ++ +EPG + G L V+ + + + Sbjct: 222 LIKNFRAKYGVEVYIEPGEAVGWQTGFLAASVLDFV----QNEKTIAILDVSAEAHMPDT 277 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN------RKIALPRPGDLLYIEKTG 372 V G C GD + L+ + A GD + E Sbjct: 278 VLMPYRPAVRGESKGGKFSYRFGGNTCLAGDIVGLDAGEPEYKFDAPLSVGDKVIFEDQI 337 Query: 373 AYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRP 403 Y V++ T+N L +++ + +R Sbjct: 338 HYTIVKNTTFNGIKLPDLLLLKENGELVTVRE 369 >gi|315121904|ref|YP_004062393.1| carboxynorspermidine decarboxylase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495306|gb|ADR51905.1| carboxynorspermidine decarboxylase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 367 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 113/388 (29%), Gaps = 27/388 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y I N + ALK S V L+ G S E+ Sbjct: 4 TPYYLIDKQKILNNLEIVQRIQKNAGIKLLLALKCFSAWGVFDILSQYMDGTTSSSLYEV 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + D + + + S+L ++A K + Sbjct: 64 MLGRKKFG---GETHAYNVAYKDCEIDVVLAHCDTIIFNNISQLNKFKEKAQKSKKNIGL 120 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + P L +I ++ + + Sbjct: 121 RINPSISYS------------NFILADPNRPFSRLGEKDKNKIADEIKNINGLMFHNNCE 168 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 +SF +L + Q+ + ++ I +GGG+ H D+ + ++ Sbjct: 169 NKSFPCFDAMLNHIEQEFGNFIFQVEWISLGGGI----HFTDNTYPIEDFCRRLKEFSEK 224 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +I LEPG +V + L T V+ I ++ ++ LY Sbjct: 225 YSIQIYLEPGEAIVTNTTTLETTVLDIAQNIKNLVIVDSSVEAHLPDCLLYK------QS 278 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + ++ A + G C GD P+ GD + E Y + +N Sbjct: 279 AIISPNKGPYTAMVCGRSCLAGDIFGDFHFETPPQIGDRISFEDVAGYNLNRKNWFNGIN 338 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQELIEL 413 + + + IIR ++ + + Sbjct: 339 MPMIVAKDLDGTLKIIRE-FSYDDYYKN 365 >gi|313205307|ref|YP_004043964.1| orn/dap/arg decarboxylase 2 [Paludibacter propionicigenes WB4] gi|312444623|gb|ADQ80979.1| Orn/DAP/Arg decarboxylase 2 [Paludibacter propionicigenes WB4] Length = 463 Score = 113 bits (282), Expect = 7e-23, Method: Composition-based stats. Identities = 55/444 (12%), Positives = 125/444 (28%), Gaps = 37/444 (8%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTM 54 F E L V L + TP I +N F+ D Sbjct: 19 EFNIVENELEWCGVPLMDIIKQYGTPLRISYLPKIAQNIQKARRMFNVAMAKVDYNGDYN 78 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPV----PAERIVFSGVGKTIDE 110 CY K++ V++ + G L+ S ++ + + V K Sbjct: 79 YCYCTKSSHFSFVMEEVLKHGVHLETSSAFDINIMESLYEQDLLKTDTFVICNGFKRPQY 138 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 ++ F + T + + Sbjct: 139 VENIQNLMRLGFTNVIPILDNKFELDLFLKDFDIKFNVGIRIAAEEEPKFDFYTSRLGIR 198 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 + I + + P V++ + I + + + +L +L+ Sbjct: 199 YNDII---PYYTKHIANNPQVELKMLHFFINTGVKDTAYYWNELNKAVNLYCELKKKCPQ 255 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC------KIILEPGRFLVADVG 284 + +++GGG I H D ++ Q I E G + V + G Sbjct: 256 LDSLNIGGGFPIQTHLDMVYDYEYMAEEIVAQIKTICTQNGVPEPHIFTEFGSYTVGESG 315 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 ++ +++ KK D+ + + P + ++ D + ++ G Sbjct: 316 AMLYSIVNQKKQNDRELWNMIDSSFMTTLPDTWAINQRYVFLAINNWDSEYERVNLGGLT 375 Query: 345 CETGDFI-----ALNRKIALPRPG--DLLYIEKTGAYGAVQSG----TYNSRLLIPEIMV 393 C++ DF + + + TGAY SG + +++ Sbjct: 376 CDSEDFYNAEVHSNAVFLPKMHEDREQYIGFFHTGAYQESLSGFGGIQHCLIPAPKLVII 435 Query: 394 NGSQ-----FHIIRPRMTFQELIE 412 + + + +++ +++ Sbjct: 436 DQDEDGEYFTKLFAKEQSYKSMLK 459 >gi|189485453|ref|YP_001956394.1| carboxynorspermidine decarboxylase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287412|dbj|BAG13933.1| carboxynorspermidine decarboxylase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 368 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 47/391 (12%), Positives = 110/391 (28%), Gaps = 29/391 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP+Y + +N D ALK S AV ++ G S Sbjct: 3 KKIETPYYLIDERKLLRNLKKIKYVRDNSGAKSVLALKCFSTWAVFDLMSKYMDGTTSSS 62 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + + + + + K Sbjct: 63 FYEAKL-------GHEKFGKETHAFSVAYSSDDVKALKNIADKIIFNSVSQLNMFYNDIK 115 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + R+NP I+ + +K + G+ + + + + + Sbjct: 116 HIKVGLRINPGISYSHFDLADPSRKYSRLGVTLEEEIMSV----------LDKISGLMFH 165 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + F +L ++ + + ++ + +GGGL + + Sbjct: 166 YNCENDDFKSFSVMLDEIAAKYEKVLNKVEWVSLGGGLYFTKDG----YPLDKFCKKLKS 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + + LEPG + L+T ++ I K+ ++ + +Y Sbjct: 222 FSKKHNVLVYLEPGETAIIKSCELITTILDIVKNVKDIAIVDASIEAHMLDLLIY----- 276 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I G C GD + + G ++ Y V+ + Sbjct: 277 -RTPAEINAKDGKNEYIIAGRSCLAGDIFGEYKLADKLKVGSTVHFANAAGYTMVKKNWF 335 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMTFQELIE 412 N + ++ + II+ + + ++ Sbjct: 336 NGLKMPSIVVKKLDGKMEIIKK-FLYNDFLK 365 >gi|317505459|ref|ZP_07963377.1| carboxynorspermidine decarboxylase [Prevotella salivae DSM 15606] gi|315663372|gb|EFV03121.1| carboxynorspermidine decarboxylase [Prevotella salivae DSM 15606] Length = 413 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 61/380 (16%), Positives = 107/380 (28%), Gaps = 21/380 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + +N + D V A KA + S E R Sbjct: 40 PIYILEEARLRRNLNLIKDVAREADVEVILAFKAYALWKTFPIFREYIRATTASSLSEAR 99 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A + T EID + S ++ ++R + Sbjct: 100 LAF--EEFGSKAHTFSPAYTDYEIDEIARL-SSHLQFNSLTQYARYHERVRKENATISLG 156 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NP+ + + +FGI ++ Sbjct: 157 LRINPEYSEVGTDLYNPCAPGTRFGITADKLPETLPADI-----------EGFHCHCHCE 205 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L+ + + ++ I+ GGG + + Sbjct: 206 SGAETFERTLQHIEAKFSRWFSQLKWINFGGGHLMTRNDYDTMLLVDVL---QKFRQRYP 262 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 K+ILEPG G LV++V+ + + VIL+V+ M L Y + Sbjct: 263 WLKVILEPGSAFAWQTGPLVSQVVDVVEDRGIKTVILNVSFTCHMPDCLEMPYFPVVRGA 322 Query: 328 NPAGDRLHIH---ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 H + G C +GDF+ P+ G+ + E Y V++ +N Sbjct: 323 KHIAQDNHHSPYIYRLGGNSCLSGDFMGYWEFDHAPQVGENVIFEDMLHYTTVKTNMFNG 382 Query: 385 RLLIPE-IMVNGSQFHIIRP 403 I I+R Sbjct: 383 ISHPAIGIARLDGTLEILRE 402 >gi|149390765|gb|ABR25400.1| diaminopimelate decarboxylase [Oryza sativa Indica Group] Length = 97 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 1/88 (1%) Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 V+P+ D DIVGP+CE+ DF+ +R++ P G L + GAY + TYN +L Sbjct: 4 VSPSPDAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKL 63 Query: 387 LIPEIMV-NGSQFHIIRPRMTFQELIEL 413 PE V + IR +F + ++ Sbjct: 64 RPPEYWVEDDGSIAKIRRGESFDDYMKF 91 >gi|126665111|ref|ZP_01736094.1| carboxynorspermidine decarboxylase [Marinobacter sp. ELB17] gi|126630481|gb|EBA01096.1| carboxynorspermidine decarboxylase [Marinobacter sp. ELB17] Length = 365 Score = 112 bits (281), Expect = 9e-23, Method: Composition-based stats. Identities = 55/388 (14%), Positives = 120/388 (30%), Gaps = 31/388 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + + +N + + ALK + V + G S E+ Sbjct: 4 TPYYLIDKSKLLRNLEIIARVREESGAKSLLALKCFATWGVFDLMQAYMDGTTSSSLNEV 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + D+ S FN S+ + + + G Sbjct: 64 KLGKQ-KFAGETHAYSVAYADDEIEDILAHSDKIIFNSISQLQRFSEASANQTRG----- 117 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 RVNP ++++ + + G + + + V + + Sbjct: 118 -LRVNPGVSSSGFALADPARPHSRLGEHDPEKIAGI----------LDQVSGFMFHNNCE 166 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 SF + +LL+ + + N+ + +GGG+ H + + + Sbjct: 167 NASFERFDELLQVIETRFGHLLENVNWVSLGGGI----HFTGEGYPLERFCQRLKAFAER 222 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG + L V+ + + ++ +Y Sbjct: 223 YAVQVYLEPGEAAITHSTSLEVTVLDLLNNDKDLAIVDSSIEAHMPDLLIY------RES 276 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 +R + I G C GD + + GD L + Y V+ +N Sbjct: 277 AKLEPNRGNYTYQICGTSCLAGDIFGEFQFEKPLQIGDCLSFQDAAGYTMVKKSWFNGVK 336 Query: 387 LIPEIMVN--GSQFHIIRPRMTFQELIE 412 + I V + +++ + + ++ Sbjct: 337 MPS-IAVKQLDGRIELVKS-FGYDDFVQ 362 >gi|146278915|ref|YP_001169074.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides ATCC 17025] gi|145557156|gb|ABP71769.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides ATCC 17025] Length = 365 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 47/379 (12%), Positives = 100/379 (26%), Gaps = 28/379 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTPFY + ++++N +G ALK + + G S E Sbjct: 3 QTPFYLIDSASLKRNMAVIDRLREGSGAKALLALKCFATWPAFDCMRDHMDGTTSSSLYE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 LR + E + + ++ + + Sbjct: 63 LRLGREKFGKETHAYSVA-----------------WPDHEIDEAVGYADKIIFNSVGQLQ 105 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I P L +++ + + + Sbjct: 106 RFRDRTRGIARGLRLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F + L ++ + + + + +GGG+ H A+ + + Sbjct: 166 ENADFDLFDRQLAEIEGRFGAILDRLDWVSLGGGI----HFTGEGYPVDRLAARLKAFAA 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + + + ++ + +Y Sbjct: 222 AHGVQVYLEPGEAAITRSATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIY------RQ 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D + G C GD R + GD L I Y V+ +N Sbjct: 276 SAKVEHDAGDHSYMVCGKSCLAGDIFGEFRFAEPLKVGDRLSIADAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN-GSQFHIIRP 403 + ++ + R Sbjct: 336 KMPSIVIREPDGSLRVARE 354 >gi|225428410|ref|XP_002283716.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] Length = 423 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 131/242 (54%), Gaps = 3/242 (1%) Query: 7 FEGSLHAENVSLEKLAHVV-QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 +G L+ E + ++ + V + PFY YS I +N+ + A +G+ +++ YA+KAN+N Sbjct: 72 EDGFLYCEGLRVQDVMDQVEKRPFYLYSKPQITRNFEAYKEALEGLRSIIGYAIKANNNL 131 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ L LG G +VS ELR AL A R +F+G GK ++++ LA Q G++ Sbjct: 132 KILEHLRELGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDS 191 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 ++ ++ GKK + R+NPD++ H ++TG K KFGI ++ Sbjct: 192 EFDLDNIISAARIA-GKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAV 250 Query: 186 STLPGV-KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 P K+ G H+GS I +++ F A L+ + ++R+ G I ++++GGGLGI Y Sbjct: 251 KAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDY 310 Query: 245 HS 246 + Sbjct: 311 YH 312 Score = 109 bits (273), Expect = 8e-22, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 I + P D D+VGP+CE+ DF+ +R++ P G L + GAY + T Sbjct: 327 HIELVSPPPSDAQISTFDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMAST 386 Query: 382 YNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 YN ++ PE V + IR TF++ + Sbjct: 387 YNLKMRPPEYWVEDDGSMSKIRHGETFEDHVR 418 >gi|325284224|ref|YP_004256765.1| carboxynorspermidine decarboxylase [Deinococcus proteolyticus MRP] gi|324316033|gb|ADY27148.1| carboxynorspermidine decarboxylase [Deinococcus proteolyticus MRP] Length = 410 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 56/391 (14%), Positives = 109/391 (27%), Gaps = 25/391 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 + +P + + + +N S + + A K S + L G G Sbjct: 22 QSIPSPAFVLDESRLRRNLALISYVQEKSGAQIIVAFKGFSMWSTFPILREYGITGATAS 81 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN-QRAVSL 140 S E+ A + E ++ D ++ +S FN + E + Sbjct: 82 SLNEVILADE-EMQGEVHAYAPAYSEEDFPEILRRSDHIVFNSVQQWERFAEQVEATRQE 140 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 G+ RVNP+ + + G+ + I G+ H Sbjct: 141 GRTIHAGIRVNPEYAEVETDLYNPAGPFSRLGVTRREFPDTLPAG-------IDGLHFHT 193 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + D L + L S + ++ GGG + ++ Sbjct: 194 LCEKDSDTLERTLEVLEEKFGEFLASEQI--KWVNFGGGHLMTREG----YDIERLIRVV 247 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + +ILEPG G LV+ V+ + + ++ Sbjct: 248 RAFREKWNVHVILEPGSAFGWQTGWLVSSVLDVVHNVKDAVLLDVSVSAHMPDVLEMPYR 307 Query: 321 HEINYIVNPAGDRLHI--------HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 I +P D I G C GD + + G + + Sbjct: 308 PRILGAGDPPSDDHREAEDVPAGHPYIIGGTTCLAGDVVGEYVFPQPLKVGSRVVFDDMI 367 Query: 373 AYGAVQSGTYNSRLLIPE-IMVNGSQFHIIR 402 Y V++ +N I+ + ++ Sbjct: 368 HYTMVKTTFFNGVKHPDIGILHADGSYERVK 398 >gi|148285661|gb|ABQ57527.1| LolD [Neotyphodium sp. PauTG-1] Length = 396 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 121/359 (33%), Gaps = 27/359 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + A D +A+K++ ++ +I+TLA G+G D S E+ Sbjct: 33 FFVADLNDVVRKWAAWKEALP--DVTPFFAVKSSYDRRLIQTLATCGAGFDCASTEEIEL 90 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ + AERI+F+ K + + L + GI ++E EL+ L+ + Sbjct: 91 ILSLGIGAERIIFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHHHYPEAQTVLRVF- 149 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + KFG L L S Sbjct: 150 ---------ADDPTNADPLGTKFGAARDDFDGLVRLVKELNMQLAGASFHAAPSVAVDAA 200 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ + + ++ + R G N +D+GGG + A G + Sbjct: 201 AYVRGIRDAAEVFARARQVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFKSEVGEGR 260 Query: 269 CKIILEPGRFLVADVGILVTKVISI--------KKSADKTFVILDVAMNDFMRPTLYDAY 320 +I+ EPG L KV++ + A + ++ + N MR + + Sbjct: 261 LRILAEPGTLFSCSPFYLAVKVVARRVNATAFGHEPATRLYINDGIYSNFMMRFIVNMTF 320 Query: 321 HE------INYIVNPAGDRLHIHADIVGPICETGDFIALNRKI-ALPRPGDLLYIEKTG 372 + + G C++ D I + ++ R GD L + G Sbjct: 321 SPAAVIREGVWHDQADHTMRGEACSLWGRSCDSNDCINRDCRLGPEVRVGDWLVFKDMG 379 >gi|260591034|ref|ZP_05856492.1| carboxynorspermidine decarboxylase [Prevotella veroralis F0319] gi|260536899|gb|EEX19516.1| carboxynorspermidine decarboxylase [Prevotella veroralis F0319] Length = 388 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 63/387 (16%), Positives = 118/387 (30%), Gaps = 23/387 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + KN ++ D + A KA + S E R Sbjct: 14 PMYILEEERLRKNLQLIASVAKEADVEIILAFKAYALWRTFPIFREYIHATTASSLYEAR 73 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 FS + D+A S FN S+ E + RA + Sbjct: 74 LGFEEFGAP-THTFSPGYTDYEIDDIARCSSHLVFNSLSQFE--RYHVRAKLENTRLSFG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNP+ + + +FGI ++ + Sbjct: 131 LRVNPEYSEVETLIYNPCAPGTRFGITSSKLPATLPEGVD-----------GFHIHCHCE 179 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + + + ++ ++ GGG + P +Y Sbjct: 180 SGSDVFERTLEHIEAKFANWFPQLKWVNFGGGHLMTRKDYDVPRLIHALKEFKKRYPWL- 238 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 K+ILEPG G LV +V+ + + IL+V+ M L YH Sbjct: 239 --KVILEPGSAFAWQTGPLVAQVLDVVEDHGIKTAILNVSFTCHMPDCLEMPYHPAVRNA 296 Query: 328 NPAGD----RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + C +GD++ R + G+ + E Y V++ +N Sbjct: 297 ELVDEDGSAEGENTYRLGANSCLSGDWMGSWRFDHPLQIGENIIFEDMLHYTTVKTNMFN 356 Query: 384 SRLLIPEIMVN-GSQFHIIRPRMTFQE 409 +++ ++ ++R T+++ Sbjct: 357 GISHPAIALLHPDNELEVLRE-FTYED 382 >gi|163741356|ref|ZP_02148747.1| Putative Ornithine decarboxylase [Phaeobacter gallaeciensis 2.10] gi|161385090|gb|EDQ09468.1| Putative Ornithine decarboxylase [Phaeobacter gallaeciensis 2.10] Length = 383 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 67/379 (17%), Positives = 122/379 (32%), Gaps = 26/379 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P +S + + F + F G +V YA+KAN + AV+ L G D+ S E+ Sbjct: 23 PILYFSPRVLHEVANRFQHGFPG---LVTYAVKANPHPAVLSNLVAAGITAFDVASPAEM 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 AA A + ++ ++ EI + G+ ++V+ SEL L S Sbjct: 80 DAVRAASPDA-VMHYNNPVRSDVEIAAGIAHGVASWSVDEPSELDKLADVPKSCEIAVRF 138 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A V KFG L + + + Sbjct: 139 ALPVAGAA----------YDFGSKFGAEPDMAIELLKRVAAEGWTPALCFHPGTQCEDES 188 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + + + + G I ++VGGG A Sbjct: 189 AWVEYVHAAK-----RIIDAAGVKIARLNVGGGFAANRDGVAPDLEKVFAAISAAAEAAF 243 Query: 267 LQCKI--ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN-DFMRPTLYDAYHEI 323 + I EPGR +V++ L ++ ++K+ + F+ + +R E+ Sbjct: 244 GAEQPLLICEPGRAMVSESFTLAARIKGMRKAGEVVFLNDGIYGGLVDIRDMGLPGRVEV 303 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTY 382 + GP C++ D + + + GD + GAY + S + Sbjct: 304 VAADGTRRGADAQPRVVFGPTCDSLDRLPDGLPLPRDTQIGDYVLFPGLGAYSSAMSTQF 363 Query: 383 NSRLL--IPEIMVNGSQFH 399 N L + ++ Q Sbjct: 364 NGYGLSDVATVIELSGQAR 382 >gi|114763331|ref|ZP_01442755.1| carboxynorspermidine decarboxylase [Pelagibaca bermudensis HTCC2601] gi|114544129|gb|EAU47139.1| carboxynorspermidine decarboxylase [Roseovarius sp. HTCC2601] Length = 376 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 56/395 (14%), Positives = 120/395 (30%), Gaps = 32/395 (8%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 + K+ +QTP+Y + + N ++ + ALK + +V ++ G Sbjct: 7 VTKVLTRMQTPYYLIDKSRLLPNMEKIAHLREQSGAKALLALKCFATWSVFDMMSEYMDG 66 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 S E++ E +S + ++ S FN + + Sbjct: 67 TTSSSLFEVKLGRE-KFSGETHAYSVAWAPDEIDEVLASSDKVIFNTAQQLQRF------ 119 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + RVNP ++ + P L +A + Sbjct: 120 EEKSRDHTRGLRVNPGVSTSGFD----------LADPARPFSRLGEHAPEDIEPVAELIS 169 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + SF + ++L + + ++ I +GGG+ H A Sbjct: 170 GFMFHNNCENASFERFDEMLGQIEARFGPLIKRMKWISLGGGI----HFTGEDYPLDKLA 225 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + ++ G + ++ LEPG + L V+ + ++ + +Y Sbjct: 226 ERLKRFAGENEVQVYLEPGEAAITKSTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIY 285 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + I G C GD R + GD L ++ Y V Sbjct: 286 RE-------SAKMQESGDQEWMICGKSCLAGDIFGEFRFPKALQAGDRLSLQDAAGYTMV 338 Query: 378 QSGTYNSRLLIPEIMVN--GSQFHIIRPRMTFQEL 410 + +N + I + ++R +++ Sbjct: 339 KKNWFNGVQMPS-IAIRELDGTERLVRS-FGYEDF 371 >gi|332184801|gb|AEE27055.1| Diaminopimelate decarboxylase [Francisella cf. novicida 3523] Length = 416 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 75/407 (18%), Positives = 146/407 (35%), Gaps = 28/407 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSN-AFDGMDTMVC-YALKANSNQAVIKTLAHLG 75 +E + +P + A+ + F + Y++K S +I+ G Sbjct: 19 IETIIQRYASPCFIIDENALLERANFFQQTILKQYKNSIAAYSVKTQSLSTIIQKFYQAG 78 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS E + + + I+F+G K + AL+ N + E+ + + Sbjct: 79 FIPEVVSSDEFQLIEKLQLWDKGIIFNGPYKNDASLIKALRLNAI-INCDHFDEILRIAK 137 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L A I RV + + + I + ++++G Sbjct: 138 IAKELNITAKIGLRVADNKTPQNWSRFGFALSNQQNNDDIFAVIDKIQQIQN---IQLAG 194 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + HIG+ I I F K + L +++ + GG + Sbjct: 195 LHCHIGTNIRDISRFAAMAKNIAGLAERILTKYKLTLDWIDLGGGLAGISPTLKDKQLHP 254 Query: 256 YASLIHQYF--------------GNLQCKIILEPGRFLV-ADVGILVTKVISIKKSADKT 300 Y + + N + K+I E GR LV V +L T V + +++ D Sbjct: 255 YRPFDLELYSRTIIAPLKEYLNKTNNKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQ 314 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +I D ++ + Y D + ++GP C DF+ + + Sbjct: 315 SLITDAGIHTIPTTSTYRHPIYHL-----KTDDDYKKTILLGPSCMQHDFLDDDVFLPKL 369 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMT 406 R GD L I+ GAY ++ + L I+++ + Q+H++R + T Sbjct: 370 RYGDKLLIDGVGAYNISRNNEFI-HLKPSVILIDKNQQYHVLRVKQT 415 >gi|148653513|ref|YP_001280606.1| carboxynorspermidine decarboxylase [Psychrobacter sp. PRwf-1] gi|148572597|gb|ABQ94656.1| carboxynorspermidine decarboxylase [Psychrobacter sp. PRwf-1] Length = 379 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 57/390 (14%), Positives = 109/390 (27%), Gaps = 25/390 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y A+++N D ALK + V + G S E+ Sbjct: 4 TPYYQIDIAALKQNLQIVQRLCDLSGAKALLALKCFATWGVFDEMTPYLHGTTSSSLNEV 63 Query: 87 R-RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 R E +S + ++ + FN ++ + Sbjct: 64 RLGKEEFGEDKETHAYSVAYSADEIDEVLTYADKIIFNSFNQLHAFKDKAK--------- 114 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I T P L + I + + Sbjct: 115 -----AQGIPVGLRINPKTSNSSFIIADPARPFSRLGEHDIQKIKPVIDDITGVMIHNNC 169 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + SF L D+ + + ++ + +GGG+ H A + + Sbjct: 170 ENNSFEAFSDSLADIEAKFGELFYQLEWVSLGGGI----HFIAPDYPLEKLAQRLKSFSE 225 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + + LVT V+ + V+ + +Y + Sbjct: 226 KYGVQVYLEPGEACIHNAAKLVTTVLDTLHNGKPLAVVDASIEAHMLDLLIYRETAPLVQ 285 Query: 326 IVNPAGDRLHIHAD----IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 I + A +D I G C GD GD + Y V+ Sbjct: 286 INDEACQITSQQSDDSTIIYGKSCLAGDIFGEYALDKPLTIGDKVSFGNAAGYTMVKKNW 345 Query: 382 YNSRLLIPEIMVNGSQFHI-IRPRMTFQEL 410 +N + + + Q + I+ +++ Sbjct: 346 FNGVAMPAIV-ICDEQGELTIQKTFGYEDF 374 >gi|312115026|ref|YP_004012622.1| Orn/DAP/Arg decarboxylase 2 [Rhodomicrobium vannielii ATCC 17100] gi|311220155|gb|ADP71523.1| Orn/DAP/Arg decarboxylase 2 [Rhodomicrobium vannielii ATCC 17100] Length = 394 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 118/385 (30%), Gaps = 28/385 (7%) Query: 25 VQTPFYC-----YSTTAI-------EKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 TP + F + F G YA+KAN + + L Sbjct: 4 YPTPAEVLRKLHVDRPVLGFRPHAAASAARWFLDNFPG---ETLYAVKANDSPKAVAALF 60 Query: 73 HLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 + G D+ S E+R P A + V + G+ F+++S+SEL Sbjct: 61 NAGIRHFDVASATEVRAIADLPG-AVMHIMHPVKSRKFIAEAYFDYGVRTFSLDSDSELD 119 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + + + S E KFG P + L A Sbjct: 120 KILAVTGNAKDLTLV-------VRVACPSTYSEISLEGKFGAPWSEAPGLIRRARQ--NS 170 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + GV H GSQ+ + + + + + + + Sbjct: 171 NMLGVSFHAGSQMMCPVGYGQVLRTVSQQIVRAATLVDIVDVGGGFPSRYPGMEPPALDA 230 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + C++ EPGR LVA+ ++ +V + + + D Sbjct: 231 YMDEIRGAFDKMAVGYTCQLWCEPGRALVAEAESVIVRVDARRGDTLYVNDGAFGTLYDA 290 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEK 370 P R D GP C++ D++A + GD + I Sbjct: 291 AHCKWVFPTRAYASDGEPMRGREKA-FDFYGPTCDSADYLAGPFMLPESIDEGDFIEIGN 349 Query: 371 TGAYGAVQSGTYNSRLLIPEIMVNG 395 GAYG V + +N E+++ Sbjct: 350 IGAYGRVMASHFNGCGYYDEVVLED 374 >gi|329847273|ref|ZP_08262301.1| lysine/ornithine decarboxylase [Asticcacaulis biprosthecum C19] gi|328842336|gb|EGF91905.1| lysine/ornithine decarboxylase [Asticcacaulis biprosthecum C19] Length = 423 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 63/369 (17%), Positives = 116/369 (31%), Gaps = 22/369 (5%) Query: 35 TAIEKN-----YLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRR 88 + + F F G V YA+KAN + V++TL G D+ S E+ Sbjct: 21 ALVRRRPVTTAAHWFQQNFKG---DVFYAVKANPSPWVLETLWAAGVRSFDVASLNEVEL 77 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + A V + G+ F++++ EL+ + I Sbjct: 78 VRSTLPTARLAFMHPVKSRVSIAQAYFDFGVRTFSLDTHEELRKILDATGGARDLNLI-- 135 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + T + S +KFG+ H SL A+ + GV H+GSQ + Sbjct: 136 -----VRLATSGEGSNLPLTNKFGVQAHDAPSLL-MAARQATQDLMGVSFHVGSQCMRPT 189 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A + + + + + + Sbjct: 190 AYAAAMAAASRALVRAGVFADVVDVGGGFPSVYPGMVPPALSEYMDVINRAFDEMKVHEE 249 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 ++ EPGR LVA+ ++TKV + + D + + T + Sbjct: 250 TQLWAEPGRALVAESTSVLTKV---ELRKGDALYLNDGSYGNLFDATHAKWPFPVRLHRQ 306 Query: 329 PAGDRLH-IHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + GP C++ D + + GD + I GAYG +N Sbjct: 307 DEAETDTLKPFRFYGPTCDSIDSMPGPFWLPDDVNEGDYVEIGMLGAYGVTMGTRFNGYG 366 Query: 387 LIPEIMVNG 395 + ++ Sbjct: 367 ETDTVFLDD 375 >gi|221640964|ref|YP_002527226.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides KD131] gi|221161745|gb|ACM02725.1| Carboxynorspermidine decarboxylase [Rhodobacter sphaeroides KD131] Length = 365 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 45/379 (11%), Positives = 96/379 (25%), Gaps = 28/379 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y + +N ALK + + + G S E Sbjct: 3 QTPYYLIDADRLRQNMAVVDRLRQASGAKALLALKCFATWPAFEHMRDHMDGTTSSSLYE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 LR + E + + ++ + + Sbjct: 63 LRLGREKFGKETHAYSVA-----------------WPDHEIDEAVGYADKIIFNSVGQLA 105 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 DI P L +++ + + + Sbjct: 106 RFRDRTGDIARGLRLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + L ++ + + + + +GGG+ H A+ + + Sbjct: 166 ENADVDLFDRQLSEIEGRFGAILDRLDWVSLGGGI----HFTGEGYPVDRLAARLKAFAA 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + + + ++ + +Y Sbjct: 222 AHGVQVYLEPGEAAITRSATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIY------RQ 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D + G C GD R + GD L I Y V+ +N Sbjct: 276 SAKVEPDAGDHSYMVCGKSCLAGDIFGEFRFAQPLQVGDRLSIADAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN-GSQFHIIRP 403 + ++ + R Sbjct: 336 KMPSIVIREPDGSLRVARE 354 >gi|156341492|ref|XP_001620778.1| hypothetical protein NEMVEDRAFT_v1g147087 [Nematostella vectensis] gi|156206104|gb|EDO28678.1| predicted protein [Nematostella vectensis] Length = 251 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 11/256 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLG 75 +L +LA+ +P Y Y T I Y +AF + + YA+KA SN ++K LG Sbjct: 5 ALLELANKYGSPLYVYDTEKISSQYHRIIHAFSKVKSVKINYAVKALSNINILKLFHQLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD VSE E++ L A V E I+F+ G +++EI+ + G+ + + Sbjct: 65 AGLDTVSEQEVQLGLTAGVAPENIIFTPNGVSLEEIEEVAKLGVQINIDNLS-----ILE 119 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + P+ R+NP + A + KIS G + KFGI I+Q+ + + I+G Sbjct: 120 LFGQKHPEIPVCIRINPHVMAGGNSKISVGHIDSKFGISIYQVPHIKRIVENTG-MHING 178 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + MH GS I I++F +A ++L ++ Q + ID G G + Y Sbjct: 179 IHMHTGSDILDIDTFIRATEILFNVASQFNTL----DFIDFGSGFKVPYKEGDIATDIEQ 234 Query: 256 YASLIHQYFGNLQCKI 271 + + F Sbjct: 235 LGKQLTKRFNQFCKDY 250 >gi|253581243|ref|ZP_04858499.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847444|gb|EES75418.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 399 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 158/404 (39%), Gaps = 42/404 (10%) Query: 18 LEKLAHV--VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS-----NQAVIKT 70 +++L TP Y + +++ + G +CYA+KAN V+ T Sbjct: 7 IKELIEKEHTPTPAYVFDLDKMKEFVKKVQSCL-GESAQLCYAMKANPFLTGPMMDVVPT 65 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA--LQSGIYCFNVESES 128 ++ S GE R VP ERIV SGV K ++++ G + VES Sbjct: 66 -------FEVCSPGEFRICERVGVPMERIVLSGVYKNPEDMEYVLSTYGGKGVYTVESLQ 118 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 L+ LN AV LG K + RV ++FG+ I + + + Sbjct: 119 HLQILNDTAVRLGMKITVLIRV---------------TSGNQFGVDEADIRKIISDRTDY 163 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSD 247 PGV+I G+ + G+Q + + L + +L+S Q ++ G G + Y Sbjct: 164 PGVEIEGLQFYSGTQKKDLSQMKTELEHLDEFIGELKSESGFEAQVLEYGPGFFVPYFKK 223 Query: 248 HRPPSSSDYASLIHQYFG--NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 + + S N + K++LE GRFL A G VT ++ +K + ++ +VI+D Sbjct: 224 DKSEDVENILSEFRALLESLNFKGKVVLEMGRFLAAACGYYVTSIVDMKVNKEQPYVIMD 283 Query: 306 VAMNDFMRPTLYDAYHEINYIV-----NPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 +N A + N ++ G +C D + + P Sbjct: 284 GGINHLNYYGQAMAMKQPYCTQLDTEGNEKTGGEEESWNLCGALCTVNDVVVKRFPLHKP 343 Query: 361 RPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQ-FHIIR 402 + D+L E+ GAY + + SR L + ++R Sbjct: 344 QLHDILVFERVGAYSVTEGIYLFLSRPLPRIYFWTEGEGLRMVR 387 >gi|303325938|ref|ZP_07356381.1| carboxynorspermidine decarboxylase [Desulfovibrio sp. 3_1_syn3] gi|302863854|gb|EFL86785.1| carboxynorspermidine decarboxylase [Desulfovibrio sp. 3_1_syn3] Length = 407 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 61/396 (15%), Positives = 114/396 (28%), Gaps = 30/396 (7%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG----SGLDI 80 V +P + + N + ALK + A L+ G G+ Sbjct: 14 VPSPCFVLDEARLAANAAILDEVQRRTGAKILLALKGYAAWATFPLLSRTGVGPLWGVCA 73 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S E R E F+ + +L + FN ++ A + Sbjct: 74 SSVDEARLGRE-EFGGEVHAFAAAWTEAEIAELLDLADHIVFNSPTQWRQFRPVIEAHNR 132 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 ++A +N + G + + A + G+ Sbjct: 133 ARRAENPIECGLRLNPEHSEGAVPIYDPCSPGSRLGIRQRHFDPA------DLEGISGLH 186 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + + A + L + ++ + I++GGG I + + Sbjct: 187 FHTLCEQGADALA-RTLDVVEEKFGPYLPACRWINMGGGHHITKPGYDLDL----LCACL 241 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM------RP 314 ++ +I LEPG + + G L V+ + + V+ A Sbjct: 242 TRWRQRYDARIYLEPGEAVALNAGWLTATVLDVVMADMPVAVLDVSAACHMPDVLEMPYR 301 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 HE A + G C GD I A G L Y Sbjct: 302 PEVFYRHEGATARAGAAGEQAWTCRLAGKSCLAGDVIGEYGFAAPLEAGQRLVFGDMAIY 361 Query: 375 GAVQSGTYNSRLLIPEIMVNG-------SQFHIIRP 403 V++ T+N L +P I + ++F ++R Sbjct: 362 SMVKTTTFNG-LRLPSIGICKAGNASGENRFRLLRE 396 >gi|148261170|ref|YP_001235297.1| Orn/DAP/Arg decarboxylase 2 [Acidiphilium cryptum JF-5] gi|146402851|gb|ABQ31378.1| ornithine decarboxylase [Acidiphilium cryptum JF-5] Length = 376 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 140/373 (37%), Gaps = 20/373 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 V TP + N+ A D + YA+KAN V+ L LGS D S Sbjct: 14 VSTPAILVDLDRVAANFAALRAALP--DAAIYYAVKANPAAPVLDRLVGLGSRFDAASIE 71 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E+R LAA I F K I A G+ F +S+ EL L + A Sbjct: 72 EIRACLAAGAAPAAISFGNTVKKRAAIAEAHARGVDLFAFDSDEELDKLAEAAPGAKVYC 131 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 +A + KFG L A+ + GV H+GSQ Sbjct: 132 RLAVSQDGA----------DWPLSRKFGTSGTHARDLLVRAAERGLI-PWGVSFHVGSQQ 180 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQ 262 + ++ A + LR+ G +++ +++GGG Y D P A + Q Sbjct: 181 TGVGAWRTAIGQAAAVFTDLRARGIDLRLLNLGGGFPTRYRDDIPPLGDFGAAIMDTVRQ 240 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVI-SIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 FGN +++EPGR +V D G+ V++V+ + + D+ + + + F + Sbjct: 241 AFGNNVPDLLIEPGRAIVGDAGVAVSEVVLACTRHEDEGRRWVYLDLGRFGGLAETEGEA 300 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQ 378 I P A + GP C+ D + LP GD + I TGAY Sbjct: 301 IRYRITAPGVAGADAPAVLAGPSCDGVDVMYRETPCPLPASLAAGDRVLIHDTGAYVTSY 360 Query: 379 SGT-YNSRLLIPE 390 + +N L E Sbjct: 361 ASQGFNGFLPPEE 373 >gi|313207184|ref|YP_004046361.1| orn/dap/arg decarboxylase 2 [Riemerella anatipestifer DSM 15868] gi|312446500|gb|ADQ82855.1| Orn/DAP/Arg decarboxylase 2 [Riemerella anatipestifer DSM 15868] gi|315022415|gb|EFT35442.1| putative arginine decarboxylase [Riemerella anatipestifer RA-YM] gi|325335377|gb|ADZ11651.1| arginine decarboxylase [Riemerella anatipestifer RA-GD] Length = 463 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 59/444 (13%), Positives = 128/444 (28%), Gaps = 35/444 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTM 54 F Y SLH ++L ++ TP I +N F Sbjct: 19 EFSYENESLHFHGINLMEVVEKFGTPLKISYLPKISQNIQRAKKWFSEAIAKNEYRNTYR 78 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 CY K++ V++ ++ S ++ + V + D Sbjct: 79 YCYCTKSSHFSFVLEEALKNDISMETSSAFDMDIVRKLYDKGKVTKDIEVICNGFKTDDY 138 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFGI 173 L+ N E+ L+ I N I A+ + Sbjct: 139 LEKISDLINEGFENITPILDNYRELDKLTESIDTTFNIGIRIASEEEPKFEFYTSRLGIG 198 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 I + P ++ + I + I + + +L+ + Sbjct: 199 YKDIIPYYSQKIAEHPNARLKMLHFFINTGIKDTAYYWNELFKCLRVYARLKKIAPEVDS 258 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL------QCKIILEPGRFLVADVGILV 287 +++GGG I + ++ Q + I E G F V + G + Sbjct: 259 LNIGGGFPIKTSLNFDYDYEYMVNEIVSQIKKFCEEEGVEEPNIYTEFGSFTVGESGANL 318 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 ++IS K+ D+ + + P + + + + + G C++ Sbjct: 319 YQIISQKRQNDREKWDMIDSSFMTTLPDTWAISRHFIMLPLNRWEDSYERVFLGGLTCDS 378 Query: 348 GDFI-----ALNRKIALPRPGD----LLYIEKTGAYGAVQS----GTYNSRLLIPEIMVN 394 D+ + + D + TGAY S + I++ Sbjct: 379 DDYYNSEQHTNAIYLPVFS--DTKPLYIGFFNTGAYQESISGYGGAHHCLIPQPRHILIT 436 Query: 395 GSQ-----FHIIRPRMTFQELIEL 413 + + + R + + +++++L Sbjct: 437 KDEEGNFVYELFREKQSPEDVLKL 460 >gi|238925013|ref|YP_002938529.1| putative diaminopimelate decarboxylase [Eubacterium rectale ATCC 33656] gi|238876688|gb|ACR76395.1| probable diaminopimelate decarboxylase [Eubacterium rectale ATCC 33656] Length = 429 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 76/417 (18%), Positives = 142/417 (34%), Gaps = 47/417 (11%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTM---VCYALKANSNQAVIKTLAHLGSGLDIVS 82 QTP+Y + T K A D +C+++KAN ++ L +++ S Sbjct: 3 QTPYYVFDTDEFAKRAAMIRAALDCKGGRRIPLCFSIKANP--FLLHRLPEGLDHVEVCS 60 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GEL +A V E I++SGV K +I+ A+ G ES +++ + + Sbjct: 61 PGELEICIALGVKPESIIYSGVMKEKCDIERAVSYGAGILTCESIRHAALISEVMIECIQ 120 Query: 143 KAPIAFRVNPDINANTHKKISTG-KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + A T ++ ++FG+ + I + ++ G+ + G+ + G Sbjct: 121 E-----GAHEAEFAETKAQVILRLTSGNQFGMSLEDIEYIISHPDEFKGITVIGIHYYSG 175 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 +Q + K+ LT G Q ++ G GL + Y D Sbjct: 176 TQKSLRKINKDLEKIKSALTGLKEKYGFEPQLVEYGPGLCVEYFEDDWQEKEKQSLDEAA 235 Query: 262 Q--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD- 318 + + + +E GRFL A G T+V IK + D + ILD ++ Sbjct: 236 EVLREFAEEYPLGIEMGRFLAASCGKYYTQVKDIKSTGDANYAILDGGIHHLNYFGQRMA 295 Query: 319 -------------------------------AYHEINYIVNPAGDRLHIHADIVGPICET 347 N + G +C Sbjct: 296 MQVPPIKVFDGIEWELEKSSDVCRVLGMVGYECMNDIINKNMQKANDCEDYTLCGSLCTV 355 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVNGSQ-FHIIR 402 D + + +++ GAY ++ + SR L + + F ++R Sbjct: 356 ADVMVREVVLPRLEIDNIIEFGHCGAYSVTEAPVLFLSRKLPAVYAYSKQKGFELLR 412 >gi|332559940|ref|ZP_08414262.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides WS8N] gi|332277652|gb|EGJ22967.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides WS8N] Length = 365 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 44/379 (11%), Positives = 95/379 (25%), Gaps = 28/379 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y + +N ALK + + + G S E Sbjct: 3 QTPYYLIDADRLRQNMAVVDRLRQASGAKALLALKCFATWPAFEHMRDHMDGTTSSSLYE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 LR + E + + ++ + + Sbjct: 63 LRLGREKFGKETHAYSVA-----------------WPDHEIDEAVGYADKIIFNSVGQLQ 105 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I P L +++ + + + Sbjct: 106 RFRDRTGGIARGLRLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + L ++ + + + + +GGG+ H A+ + + Sbjct: 166 ENADVDLFDRQLSEIEGRFGAILDRLDWVSLGGGI----HFTGEGYPVDRLAARLKAFAA 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + + + ++ + +Y Sbjct: 222 AHGVQVYLEPGEAAITRSATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIY------RQ 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D + G C GD R + GD L I Y V+ +N Sbjct: 276 SAKVEPDAGDHSYMVCGKSCLAGDIFGEFRFAQPLQVGDRLSIADAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN-GSQFHIIRP 403 + ++ + R Sbjct: 336 KMPSIVIREPDGSLRVARE 354 >gi|313677330|ref|YP_004055326.1| orn/dap/arg decarboxylase 2 [Marivirga tractuosa DSM 4126] gi|312944028|gb|ADR23218.1| Orn/DAP/Arg decarboxylase 2 [Marivirga tractuosa DSM 4126] Length = 462 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 55/444 (12%), Positives = 121/444 (27%), Gaps = 37/444 (8%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM---- 54 F + +L +V L + TP I +N F+NAF ++ Sbjct: 18 EFNVEDNALKFHDVPLMDIIEKYGTPLKLTYLPKISQNINQAREYFANAFKKLNYKGEYT 77 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA----ERIVFSGVGKTIDE 110 CY K++ V++ G ++ S ++ + V K Sbjct: 78 YCYCTKSSHFSFVMEEALKAGVHMETSSSFDIPIVKKLHEKGLLTKQHYVVCNGFKRPLY 137 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 + F + K P + + + T + + Sbjct: 138 RQYINELINDGFENVVPVLDDLNEIDSYEAEAKNPYKVGIRIASDEEPTFEFYTSRLGIR 197 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 + I + K+ + I + I + D +L+ Sbjct: 198 YNDVI---DLYQNKIAKSEKAKLKMLHFFINTGIKDTAYYWSELGRFIDKYCELKKIAPE 254 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL------QCKIILEPGRFLVADVG 284 + ID+GGG I ++ I+ E G + V + G Sbjct: 255 LDTIDIGGGFPIKTSLGFEYDYQYMVDQIVENIQWICEKNNVETPHIMTEFGSYTVGESG 314 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 + ++ K DK + P ++ + + + + G Sbjct: 315 ATIYSILDQKLQNDKELWYMIDGSFITHLPDVWGLNQKFILMAINNWNEPFHKVKMGGLT 374 Query: 345 CETGDFI-----ALNRKIALPRPGD--LLYIEKTGAYGAVQSG----TYNSRLLIPEIMV 393 C++ D+ + + + + TGAY G + ++V Sbjct: 375 CDSMDYYNSEAHSFEVFLPKVERNEQQYVGFFHTGAYQESLGGYGGIQHCLIPAPKHVLV 434 Query: 394 NGSQ-----FHIIRPRMTFQELIE 412 + + + T + +++ Sbjct: 435 DKDEEGNITTKLFAEEQTSESMLK 458 >gi|326404575|ref|YP_004284657.1| putative lysine/ornithine decarboxylase [Acidiphilium multivorum AIU301] gi|325051437|dbj|BAJ81775.1| putative lysine/ornithine decarboxylase [Acidiphilium multivorum AIU301] Length = 376 Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 139/373 (37%), Gaps = 20/373 (5%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 V TP + N+ A D + YA+KAN V+ L LGS D S Sbjct: 14 VSTPAILVDLDRVAANFAALRAALP--DAAIYYAVKANPAAPVLDRLVGLGSRFDAASIE 71 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E+R LAA I F K I A G+ F +S+ EL L A Sbjct: 72 EIRACLAAGAAPAAISFGNTVKKRAAIAEAHARGVDLFAFDSDEELDKLAAAAPGAKVYC 131 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 +A + KFG L A+ + GV H+GSQ Sbjct: 132 RLAVSQDGA----------DWPLSRKFGTSGTHARDLLVRAAERGLI-PWGVSFHVGSQQ 180 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQ 262 + ++ A + LR+ G +++ +++GGG Y D P A + Q Sbjct: 181 TGVGAWRTAIGQAAAVFTDLRARGIDLRLLNLGGGFPTRYRDDIPPLGDFGAAIMDAVRQ 240 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVI-SIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 FGN +++EPGR +V D G+ V++V+ + + D+ + + + F + Sbjct: 241 AFGNNVPDLLIEPGRAIVGDAGVAVSEVVLACTRHEDEGRRWVYLDLGRFGGLAETEGEA 300 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQ 378 I P A + GP C+ D + LP GD + I TGAY Sbjct: 301 IRYRITAPGVAGADAPAVLAGPSCDGVDVMYRETPCPLPASLAAGDRVLIHDTGAYVTSY 360 Query: 379 SGT-YNSRLLIPE 390 + +N L E Sbjct: 361 ASQGFNGFLPPEE 373 >gi|126460903|ref|YP_001042017.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides ATCC 17029] gi|126102567|gb|ABN75245.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides ATCC 17029] Length = 365 Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 44/379 (11%), Positives = 95/379 (25%), Gaps = 28/379 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y + +N ALK + + + G S E Sbjct: 3 QTPYYLIDADRLRQNMAVVDRLRQASGAKALLALKCFATWPAFEHMRDHMDGTTSSSLYE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 LR + E + + ++ + + Sbjct: 63 LRLGREKFGKETHAYSVA-----------------WPDHEIDEAVGYADKIIFNSVGQLA 105 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I P L +++ + + + Sbjct: 106 RFRNRTGGIARGLRLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + L ++ + + + + +GGG+ H A+ + + Sbjct: 166 ENADVDLFDRQLSEIEGRFGAILDRLDWVSLGGGI----HFTGEGYPVDRLAARLKAFAA 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + + + ++ + +Y Sbjct: 222 AHGVQVYLEPGEAAITRSATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIY------RQ 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D + G C GD R + GD L I Y V+ +N Sbjct: 276 SAKVEPDAGDHSYMVCGKSCLAGDIFGEFRFAQPLQVGDRLSIADAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN-GSQFHIIRP 403 + ++ + R Sbjct: 336 KMPSIVIREPDGSLRVARE 354 >gi|224438189|ref|ZP_03659124.1| carboxynorspermidine decarboxylase NspC [Helicobacter cinaedi CCUG 18818] gi|313144634|ref|ZP_07806827.1| carboxynorspermidine decarboxylase NspC [Helicobacter cinaedi CCUG 18818] gi|313129665|gb|EFR47282.1| carboxynorspermidine decarboxylase NspC [Helicobacter cinaedi CCUG 18818] Length = 418 Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 64/416 (15%), Positives = 116/416 (27%), Gaps = 41/416 (9%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + TP Y + N + + ALK + TL H SG Sbjct: 9 EIPTPAYVLEEERLNHNLKILESIQKQSGAKILLALKGYAFWRRFDTLKHTLSGSTASGL 68 Query: 84 GELR----------------RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 E R ++ E VFS K + + + FN ++ Sbjct: 69 YEARLGYEEIGGRANQDKDNTQDSSVQHKEICVFSPAYKASEFESILEYATHIIFNSFNQ 128 Query: 128 SELKTL------NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 + + RVN + + + GI + Sbjct: 129 WQKFKPLIDSKNQTLLTQNLSPIEVGLRVNLLYSEVEPPIYNPCVPLSRLGITPSEFTKG 188 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 + + + L + N + ++ GGG Sbjct: 189 VQQYGLQGIDGLHF-------HTHCEQDSAALSRTLPHFEKHFGIYLKNKKWVNFGGGHH 241 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 I + + ++ LEPG + VG L+ +V+ I ++ K Sbjct: 242 ITRADYDCELLINLI---KDFKQRHNDIEVFLEPGEAVGWQVGFLIGEVVDIVENQGKVA 298 Query: 302 V-------ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + + + RPTL + N + + + GP C GD I Sbjct: 299 ILDVSAAAHMPDCLEMPYRPTLCKLSKDGNIESDKGINIAQYTYRLGGPTCLAGDVIGDY 358 Query: 355 RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 GD + E Y V++ T+N L +++ +F I R + + Sbjct: 359 SFDTPLLVGDRIIFEDMLHYTIVKNNTFNGIPLPFLGVIDTNGKFE-ILKRFDYTD 413 >gi|77462013|ref|YP_351517.1| putative carboxynorspermidine decarboxylase protein [Rhodobacter sphaeroides 2.4.1] gi|77386431|gb|ABA77616.1| putative carboxynorspermidine decarboxylase protein [Rhodobacter sphaeroides 2.4.1] Length = 365 Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 44/379 (11%), Positives = 95/379 (25%), Gaps = 28/379 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y + +N ALK + + + G S E Sbjct: 3 QTPYYLIDADRLRQNMAVVDRLRQASGAKALLALKCFATWPAFEHMRDHMDGTTSSSLYE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 LR + E + + ++ + + Sbjct: 63 LRLGREKFGKETHAYSVA-----------------WPDHEIDEAVGYADKIIFNSVGQLA 105 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I P L +++ + + + Sbjct: 106 RFRNRTGGIARGLRLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + L ++ + + + + +GGG+ H A+ + + Sbjct: 166 ENADVDLFERQLSEIEGRFGAILDRLDWVSLGGGI----HFTGEGYPVDRLAARLKAFAA 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ LEPG + L V+ + + + ++ + +Y Sbjct: 222 AHGVQVYLEPGEAAITRSATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIY------RQ 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D + G C GD R + GD L I Y V+ +N Sbjct: 276 SAKVEPDAGDHSYMVCGKSCLAGDIFGEFRFAQPLQVGDRLSIADAAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN-GSQFHIIRP 403 + ++ + R Sbjct: 336 KMPSIVIREPDGSLRVARE 354 >gi|154492269|ref|ZP_02031895.1| hypothetical protein PARMER_01903 [Parabacteroides merdae ATCC 43184] gi|154087494|gb|EDN86539.1| hypothetical protein PARMER_01903 [Parabacteroides merdae ATCC 43184] Length = 366 Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 56/376 (14%), Positives = 116/376 (30%), Gaps = 18/376 (4%) Query: 34 TTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAP 93 + +N + + V A KA + + S+ E R A Sbjct: 3 EELLRRNLSLIKSVKERAGVNVILAFKAFAMWKAFPIVREYIPYSTASSKFEARLAFEEM 62 Query: 94 VPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD 153 +S D ++ S FN ++ E + G + R+NP+ Sbjct: 63 GSRAHT-YSPAYTEADFPEILRYSSHVTFNSLTQFERFYP--MVQADGNRVSCGLRINPE 119 Query: 154 INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKA 213 + + + G+ + L + + S + Sbjct: 120 YSDVETDLYNPCAPGSRMGVVSDLLDGL-----------LPDGVEGLHFHTLCESSSYDL 168 Query: 214 FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL 273 K L ++ ++ +I+ +++GGG + + L +II+ Sbjct: 169 EKTLGEVEKRFGRFLPHIKWLNMGGGHLMTRKGYD---TEHLIGLLQAFKAKYPNLEIIM 225 Query: 274 EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR 333 EPG G L+T V+ I ++ I+D + M L Y + + Sbjct: 226 EPGSAFAWQTGFLLTTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYKPVIRGAIEPEEG 285 Query: 334 LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + I G C +GD++ + GD L E Y V++ +N + Sbjct: 286 KPV-YRIGGNSCLSGDYMGDWFFEQPLKVGDKLIFEDMIHYTIVKTTMFNGIPHPSLALW 344 Query: 394 NGSQFHIIRPRMTFQE 409 + ++ +++ Sbjct: 345 SKEDRLVMYKEFGYED 360 >gi|46204395|ref|ZP_00050057.2| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 159 Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 G LH ++L +L TP + Y + + Y A G V +++KAN N AV Sbjct: 18 GGVLHVGGLALTELTKEFGTPLFVYDAGTMRRTYRALREAVAGF-AEVDFSVKANPNPAV 76 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 I+ G+G +I S E AL A V AERI+F+G GK+ ++D + GI ++E+ Sbjct: 77 IRVFGQEGAGAEIASGAEFDAALRAGVAAERILFAGPGKSAADLDRVIGGGIGEIHLENR 136 Query: 128 SELKTLNQ 135 E+ + Sbjct: 137 EEMARVAA 144 >gi|166030547|ref|ZP_02233376.1| hypothetical protein DORFOR_00208 [Dorea formicigenerans ATCC 27755] gi|166029709|gb|EDR48466.1| hypothetical protein DORFOR_00208 [Dorea formicigenerans ATCC 27755] Length = 408 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 77/413 (18%), Positives = 144/413 (34%), Gaps = 40/413 (9%) Query: 19 EKLAHVV----QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 +++ +TP Y + ++ G +C+A+KAN +I L Sbjct: 3 QEILQAYLRQEETPAYIFDLDMLKSRVRMMKTIL-GERAEICFAMKANP--FLIGPLKDT 59 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 ++ S GE +P ERIV SGV K +I A+ + E + Sbjct: 60 ADKFEVCSPGEFHICETVGIPMERIVLSGVNKEKCDITHAMHTYGNAGVYT--IESRKHL 117 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + K+ I + + ++FGI ++ + + P V+I Sbjct: 118 ELLEMCAKEENITIHALIRVTSG-----------NQFGIDEEEVFDIVSKKDYYPHVRIE 166 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPPSS 253 G+ + G+Q + K L D+ +L+ ++ + ++ G G I Y + Sbjct: 167 GIQCYSGTQKKKFSKIEKELHWLDDILTRLKETCDYDAEVLEYGPGFYIPYFENEDEVDD 226 Query: 254 SDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 Q KI LE GR++ A G VT+++ K + + + I+D +N Sbjct: 227 ESLLQQFADTLATLKFQGKITLEMGRYIAAYCGYYVTRIVDQKINHGQNYCIVDGGLNHL 286 Query: 312 MRPTLYDAYHEINYIVNPAGDRL--------------HIHADIVGPICETGDFIALNRKI 357 A ++ P + +I G +C D + + Sbjct: 287 NYYGQAMAMKMPHHKHIPDAPSEASDEQSEEQSEEQSEVLWNICGSLCTVNDVLVKQMPL 346 Query: 358 ALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMV-NGSQFHIIRPR-MTF 407 + GD L E+ GAY + + SR + + F R ++ Sbjct: 347 KHAKIGDALVFERVGAYSVTEGIYLFLSRRMPRILFWSEKDGFTEARKATESY 399 >gi|147818133|emb|CAN69215.1| hypothetical protein VITISV_030355 [Vitis vinifera] Length = 391 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 110/347 (31%), Gaps = 25/347 (7%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 + A + + YA+K N +I LA LG+ D S E+ + A + + S Sbjct: 50 WKQALP--NVVPYYAVKCNCQPPLITALASLGANFDCASRAEIE-TVMALGVGAQQIVSP 106 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 + A + + Q + + A Sbjct: 107 IHTR---FKAAHLDPKRIISTQLGMGRYKWYQSRSPTPVWGSLQKESWRSLGAK------ 157 Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 FG ++ L AS G+++ GV H+GS+++ + + A R + Sbjct: 158 -------FGALPEEVVPLLQQAS-AAGLRVIGVSFHVGSKVNDPQVYRGAIASARGVFDA 209 Query: 224 LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCK--IILEPGRFLVA 281 H+ GG + H + A+ + I+ EP R Sbjct: 210 AAQLKLPPMHVLDIGGGLQESPTFHEIAAVIKEATNDYFPSSETSEDLKIMAEPERLFAE 269 Query: 282 DVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI---VNPAGDRLHIHA 338 LV+ +I + +K +D + YD + + ++ + Sbjct: 270 TAFTLVSNIIGKRVRGEKREYWIDDGIYRSFNLPAYDKSSMMVKPLLGGSEWMNKAKFSS 329 Query: 339 DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + GP C++ D + ++ D+L GAY A +N Sbjct: 330 TVFGPTCDSTDMVVAESQLPELHMNDVLVFYNMGAYTASAGTRFNGF 376 >gi|255037181|ref|YP_003087802.1| Orn/DAP/Arg decarboxylase 2 [Dyadobacter fermentans DSM 18053] gi|254949937|gb|ACT94637.1| Orn/DAP/Arg decarboxylase 2 [Dyadobacter fermentans DSM 18053] Length = 501 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 56/428 (13%), Positives = 119/428 (27%), Gaps = 33/428 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM---- 54 F L NV L + TP I ++ F NAF + Sbjct: 18 EFNVDNNELLFNNVPLMDIIKEHGTPLKINYLPKIGEHIENANMFFRNAFKRHNYKGTYT 77 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGEL----RRALAAPVPAERIVFSGVGKTIDE 110 CY K++ V++ ++ S ++ V + + K Sbjct: 78 YCYCTKSSHFSFVLEEALKHNIHIETSSAFDIPIIRELYRRGKVNKSTYILANGYKLPRY 137 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 + FNV + + + F + + + T + + Sbjct: 138 TQYLSELINEGFNVVPILDNLKEIESYEQQVTADSVHFGMRIATDEEPNFAFYTSRLGIR 197 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 + P K+ + I + I + +++ + Sbjct: 198 YNDV---QQLYKEKIEPNPRFKLKMLHFFINTGIKDSAYYWSELTRFMFKYCEMKKICPD 254 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVG 284 + ID+GGGL I +I I E G + V + G Sbjct: 255 LDSIDIGGGLPIQTSLQSGYDYQQMIDEIIENIQWICNKNNVPVPHIFTEFGSYTVGESG 314 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 ++ ++I K DK + P + + + D + ++ G Sbjct: 315 AVIYEIIDKKLQNDKELWYMINGSFITQLPDSWGMNQKYIMLPINNWDNPYQKVNLGGLT 374 Query: 345 CETGDFI-----ALNRKIALPRPGD--LLYIEKTGAYGAVQSG----TYNSRLLIPEIMV 393 C++ DF + + + + + + TGAY G + +++ Sbjct: 375 CDSQDFYNSEMHSADLYMPIFEDNEPQYIGFFHTGAYQESLGGYGGIQHCLIPAPKHVLI 434 Query: 394 N-GSQFHI 400 + + + Sbjct: 435 DRDDEGRL 442 >gi|310816500|ref|YP_003964464.1| carboxynorspermidine decarboxylase [Ketogulonicigenium vulgare Y25] gi|308755235|gb|ADO43164.1| carboxynorspermidine decarboxylase [Ketogulonicigenium vulgare Y25] Length = 365 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 52/382 (13%), Positives = 107/382 (28%), Gaps = 37/382 (9%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPFY T + +N + D ALK + V LA + G S EL Sbjct: 5 TPFYLIDRTKLSRNLQIINRLRDLSGAKTLLALKCFATWPVFDQLAEVMDGTTSSSLYEL 64 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + + S++E+ A + + Sbjct: 65 RLG---------------------HEKFGKETHAYSVGWSDAEIDEAVSYADKIIFNSIG 103 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK----ISGVDMHIGS 202 ++ + + + G + ++ K + + + Sbjct: 104 QLTRFEAASSKVARGLRLNPRFSTSGFDLADPARAFSRLGEWDVDKIRAVLPLITGVMIH 163 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + F + L + + + + +GGG+ H A+ + Sbjct: 164 YNCENGDFDLFDRQLTRIEDEFGEILRQLDWVSLGGGI----HFTGEGYPLEKLAARLKA 219 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + N+ ++ LEPG + + L V+ I + ++ + +Y + Sbjct: 220 FAANMGVQVYLEPGEATITNTTSLEVTVLDILNNGKDLAIVDSSVEAHMLDLLIYRTTAK 279 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + I G C GD + GD L I Y V+ + Sbjct: 280 METSGD-------YPYQIAGKSCLAGDIFGDFTFPKPLQVGDRLSIADAAGYTMVKKNWF 332 Query: 383 NSRLLIPEIMVN-GSQFHIIRP 403 N + ++ + R Sbjct: 333 NGVKMPSIVIRELDGSMTVARE 354 >gi|312130133|ref|YP_003997473.1| carboxynorspermidine decarboxylase [Leadbetterella byssophila DSM 17132] gi|311906679|gb|ADQ17120.1| carboxynorspermidine decarboxylase [Leadbetterella byssophila DSM 17132] Length = 379 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 65/369 (17%), Positives = 119/369 (32%), Gaps = 25/369 (6%) Query: 46 NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVG 105 + D + ALK S + + SG S E R + E V + Sbjct: 29 SVQDRSGAEIIVALKGFSFYSKFPLVKQYLSGATASSLNEARLIVE-----EMGVLAHTY 83 Query: 106 KTIDEIDLALQSGIY--CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 + + Q Y S ++ + + + +K + R+NP+ + Sbjct: 84 CPAYKEEEFDQMMEYSSHITFNSLNQYEKYKDKVKAFPRKISMGLRINPEYAEVEVDMYN 143 Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 K + GI L G + + S + + L + + Sbjct: 144 PAIKGSRLGIT-----------RNLLGDTLPEGIEGLHSHTLCENDSYVLERTLVHIEGK 192 Query: 224 LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADV 283 H + +++GGG + LI ++ILEPG + + Sbjct: 193 FGHLLHQAKWLNLGGGHLMTRKG----YDHEHLIGLIQNLKAKYNIEVILEPGSAIGWET 248 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G L +KV+ I S ILDV+ M TL Y + + G Sbjct: 249 GFLRSKVLDIVDSLGVKIAILDVSFAAHMPDTLEMPYKPKVWGAESEAVEGKFVYRLGGM 308 Query: 344 ICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIR 402 C GD+++ + GD + Y V++ T+N L ++ F +++ Sbjct: 309 TCLAGDYMSEYSFDQELKEGDTIVFNDMIHYTMVKTTTFNGVGLPSIGVLREDGSFELLK 368 Query: 403 PR--MTFQE 409 TF++ Sbjct: 369 SFGYETFKD 377 >gi|254475844|ref|ZP_05089230.1| diaminopimelate/ornithine decarboxylase [Ruegeria sp. R11] gi|214030087|gb|EEB70922.1| diaminopimelate/ornithine decarboxylase [Ruegeria sp. R11] Length = 405 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 69/365 (18%), Positives = 122/365 (33%), Gaps = 24/365 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P +S + + F F G +V YA+KAN + AV+ L G D+ S E+ Sbjct: 45 PILYFSPRVLHEVANRFQTGFPG---LVTYAVKANPHPAVLSNLVAAGITAFDVASPAEM 101 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 AA A + ++ ++ EI + G+ ++V+ SEL L S Sbjct: 102 DAVRAASPDA-VMHYNNPVRSDAEIAAGIDHGVASWSVDDASELAKLADVPKSCEIAVRF 160 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A V KFG + +L + + + Sbjct: 161 ALPVAGAA----------YDFGSKFGASPEEAVALLKAVTEGGWTPALCFHPGTQCEDES 210 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS--SSDYASLIHQYF 264 + + + G I ++VGGG A F Sbjct: 211 AWVEYIYAAK-----DIIAAAGVEIARLNVGGGFAANRDGVAPDLERVFEAIARAADAAF 265 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN-DFMRPTLYDAYHEI 323 G+ + +I EPGR +V++ L ++ ++K+ + F+ + +R E+ Sbjct: 266 GDDKPLLICEPGRAMVSESFTLAARIKGMRKAGEVVFLNDGIYGGLVDIRDMGLPGRVEV 325 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTY 382 + GP C++ D + + R GD + GAY + S + Sbjct: 326 VAANGTRRQGDRRPRVVFGPTCDSLDRLPDGLPLPEETRIGDYVLFPGLGAYSSAMSTQF 385 Query: 383 NSRLL 387 N L Sbjct: 386 NGYGL 390 >gi|160889900|ref|ZP_02070903.1| hypothetical protein BACUNI_02331 [Bacteroides uniformis ATCC 8492] gi|156860892|gb|EDO54323.1| hypothetical protein BACUNI_02331 [Bacteroides uniformis ATCC 8492] Length = 366 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 55/377 (14%), Positives = 111/377 (29%), Gaps = 20/377 (5%) Query: 34 TTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAP 93 + KN + D + A K+ + S E R A Sbjct: 3 EGLLRKNLALIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYEARLA--LE 60 Query: 94 VPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD 153 + T + ++ S S+ V+ G R+NP+ Sbjct: 61 EFGSKAHTYSPAYTEADFPEIMRC-SSHITFNSLSQFHRFYPVVVAEGSGISCGIRINPE 119 Query: 154 INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKA 213 + + + +FG+ + ++ S ++ Sbjct: 120 YSEVETELYNPCAPGTRFGVMADPLPE-----------ELPVGIEGFHCHCHCESSSYEL 168 Query: 214 FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL 273 L L + I+ +++GGG + L +IIL Sbjct: 169 EHTLEHLEGKFSRWFSQIKWLNLGGGHLMTRKDYDVEHLVRLLQGLK---GRYSHLQIIL 225 Query: 274 EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR 333 EPG G+L ++++ I ++ IL+V+ M L Y GD Sbjct: 226 EPGSAFTWQTGVLSSEIVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAEM-GDA 284 Query: 334 LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + G C +GD++ L + G+ + E Y V++ +N M Sbjct: 285 GPYVYRLGGNSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTTVKTNMFNGIHHPAIAMW 344 Query: 394 -NGSQFHIIRPRMTFQE 409 + + + ++++ Sbjct: 345 TKEGKAEVFKQ-FSYED 360 >gi|304312358|ref|YP_003811956.1| hypothetical protein HDN1F_27300 [gamma proteobacterium HdN1] gi|301798091|emb|CBL46313.1| Hypothetical protein HDN1F_27300 [gamma proteobacterium HdN1] Length = 426 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 78/398 (19%), Positives = 142/398 (35%), Gaps = 25/398 (6%) Query: 30 YCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 Y N F AF T + Y+ K N +I+ LG ++VS E Sbjct: 24 YWLDLPKFRSNVQRFLAAFQRYYPRTKIAYSCKTNYLPTLIQAAYQLGCLAEVVSATEYD 83 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A + + I+++G K+ + A G + G + + Sbjct: 84 IAKRVGIKPQDIIYNGPVKSASSLLNAFHEGAQVHIDSVTEAHLAAKLLSEHTGPEITLG 143 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R I+ NT+ + +++ IH + P V+ +GV H ++ I Sbjct: 144 IRCTFPIDGNTNSQFGLDPTDEQARQAIHTLL-------NAPRVRSAGVHAHFSTRERSI 196 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH------SDHRPPSSSDYAS--- 258 SF + + L + + IDVGGG PS DYA Sbjct: 197 ASFRERTEKLLH-WAETLIPPKQLAFIDVGGGFFGPMPASLQASFGIEIPSYEDYAEAVA 255 Query: 259 -LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR--PT 315 + + FGN ++I+EPG LVADV T+++++K+S + I+ ++ + + Sbjct: 256 GTLKRKFGNDGPELIIEPGAALVADVMGFCTEIVALKRSHGRVHGIVAGSLQNLRPTGRS 315 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + + A I+G C D + + + GD Y GAY Sbjct: 316 TAPLPYHYEPALERNDAIAAHDAKIMGNTCMETDVLLDGFQGS-LAVGDRFYFSNMGAYS 374 Query: 376 AVQSGTYNSRLLIPEIMVNGS-QFHIIRPRMTFQELIE 412 V + + ++ ++R T ++++ Sbjct: 375 WVFKPPFIA-PAPAIYCIDDEPPITLVRRAETAEDMLA 411 >gi|32266317|ref|NP_860349.1| carboxynorspermidine decarboxylase NspC [Helicobacter hepaticus ATCC 51449] gi|32262367|gb|AAP77415.1| carboxynorspermidine decarboxylase NspC [Helicobacter hepaticus ATCC 51449] Length = 411 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 55/379 (14%), Positives = 100/379 (26%), Gaps = 21/379 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + +P Y + N + + ALK + V + L SG Sbjct: 14 TLPSPAYVLEEEKLNANLALLDSVQQRSGAKILLALKGYAFWRVFENLKCTLSGSTASGL 73 Query: 84 GE----LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL------ 133 E A E VFS K + + + FN + + Sbjct: 74 YEARLGYEEIGGANKGKEVCVFSPAYKKEEFESILNYATHIIFNSFYQWQRFKPLIESKN 133 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + RVNP + + + GI ++ A Sbjct: 134 TMLKAHSQAPIEVGLRVNPLYSEVEPPIYNPCIAGSRLGITPNEFQKGVAQYGLDGI--- 190 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + + + L + + + ++ GGG I Sbjct: 191 ----SGLHFHTHCEQDSAALSRTLPHFEKHFGAYIQGKKWVNFGGGHHITRVDYDCDLLV 246 Query: 254 SDYASLIHQYFGNLQC----KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + +Y + + FL+ +V +V IS+ + + Sbjct: 247 NLICDFKRRYKDIEIFLEPGEAVGWQVGFLIGEVIDIVQNEISVAILDVSAAAHMPDCLE 306 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 RP+L + + + + GP C GD I GD + E Sbjct: 307 MPYRPSLIKLSKQTGLESDKGEGKGAYAYRLGGPTCLAGDVIGDYSFDTPLCIGDRVIFE 366 Query: 370 KTGAYGAVQSGTYNSRLLI 388 Y V++ T+N L Sbjct: 367 DMLHYTIVKNNTFNGVPLP 385 >gi|171910002|ref|ZP_02925472.1| CARBOXYNORSPERMIDINE DECARBOXYLASE [Verrucomicrobium spinosum DSM 4136] Length = 383 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 58/394 (14%), Positives = 107/394 (27%), Gaps = 29/394 (7%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + TP+Y + + ALK S+ + G S Sbjct: 2 RLSTPYYLIDEARMLPAMERIRLVQERSGAKCVLALKCFSSWCAFDFMRQYLVGTTSSSL 61 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R E +S + ++A ++ + + Sbjct: 62 WETRLGHE-KFGGETHGYSVAYADDEIAEVA----------------GYCDKIIFNSLGQ 104 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 I+ G + P+ Q L A LP S + + Sbjct: 105 LNRLGHHAAGISMGLRLNPGIGHSCSELSNPVCQYSRLGVRAEELPEDIGSRIQGAMIHV 164 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + L + ++ ++Q + GGG+ D+ + ++ Sbjct: 165 NCDNDDLASFCSQLDVIEERFGKLLPHLQWLSFGGGIA----FTDEAYPIDDFCRRLREF 220 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH-- 321 +I LEPG V LV KV+ + ++ T V+ + Y Sbjct: 221 SQRHSLEIYLEPGEAAVTHSTSLVVKVLDVVENEVPTLVVDAGVETHLLDVLTYGYTPEV 280 Query: 322 ----EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + G R I G C GD GD L G Y V Sbjct: 281 DGAEPLARDAKDLGGRAGHVYRICGRTCLAGDHFGNYVFPRPVALGDELRFPNVGGYSMV 340 Query: 378 QSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 + +N + N + +++ T+++ Sbjct: 341 KKNYFNGIRMPAIYHRNLSGELRLVQQP-TYEDF 373 >gi|315639212|ref|ZP_07894374.1| carboxynorspermidine decarboxylase [Campylobacter upsaliensis JV21] gi|315480538|gb|EFU71180.1| carboxynorspermidine decarboxylase [Campylobacter upsaliensis JV21] Length = 382 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 61/396 (15%), Positives = 127/396 (32%), Gaps = 31/396 (7%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN + + V ALK + +K + G Sbjct: 4 ETIQTPAYILEEDKLRKNCELLAKVSEKSGAKVLLALKGFAFSGAMKIVGEYLHGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + E FS K + ++A S FN + K Sbjct: 64 LWEAKFAKE-FMDKEIHTFSPAFKDEEFDEIAELSHHIVFNSLHQFH------HFKEKAK 116 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + R NP+ + + + + + GI + L +SGV Sbjct: 117 AKSLGLRCNPEYSLAPKELYNPCGRYSRLGI----------LSKDLENADLSGVSGLHFH 166 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + + +L+ + ++ ++ GGG +H + +L + Sbjct: 167 ALCEESAEA-LEAVLKAFEAKFGKWLTQMKWVNFGGG----HHITKKGYDVEKLITLCKK 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G+LV VI I ++ + ++ + + E Sbjct: 222 FSDKFGVQVYLEPGEAVGWQTGVLVASVIDIVENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INY---------IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + + + G C GD + + GD + Sbjct: 282 VLNARVLSTREGEQISSLREGEKAYLLAGNTCLAGDVMGEYAFKNALQRGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 Y V++ T+N +L ++ + I + ++++ Sbjct: 342 YSIVKNTTFNGVILPNLMLYTKEKKLEIVRKFSYED 377 >gi|149186768|ref|ZP_01865079.1| diaminopimelate/ornithine decarboxylase [Erythrobacter sp. SD-21] gi|148829676|gb|EDL48116.1| diaminopimelate/ornithine decarboxylase [Erythrobacter sp. SD-21] Length = 400 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 111/349 (31%), Gaps = 10/349 (2%) Query: 49 DGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKT 107 + YA+KAN + +++ L G D+ S E+R + A V Sbjct: 37 EKFPGKSLYAVKANPSPDLVQILWDNGVTHYDVASIAEVRMVRSVLPDATLCFMHPVKSP 96 Query: 108 IDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK 167 + Q G+ F+++S EL + + +A R+ + ++ + Sbjct: 97 GAIREAYFQHGVKTFSLDSSEELLKIVEATRGEDGEAATDLRLCVRLRVSSE--HAALSL 154 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 KFG + + +L GV H+GSQ ++ +A R + Sbjct: 155 ASKFGCDLTEAPALLQETRQYA--DWLGVCFHVGSQAMSPFAYVQALDRTRAAIAEASVV 212 Query: 228 GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 I + + ++ EPGR L A+ LV Sbjct: 213 IDMIDVGGGFPSVYPGMEPPPLEDYFKIIHQHFYALPIAYNAELWCEPGRALCAEYSSLV 272 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 KV + A+ D + + + + + GP C+ Sbjct: 273 VKVEKRRGEELYINDGAYGALFDAA----HVEWKFPVRALEDDLIKPEMDFAFYGPTCDD 328 Query: 348 GDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 D++ + + GD + I GAYGA +N I+V Sbjct: 329 ADYMPGPFGLPEDIQAGDYIEIGMLGAYGAAMKTDFNGFGAAERIIVTD 377 >gi|238917346|ref|YP_002930863.1| hypothetical protein EUBELI_01423 [Eubacterium eligens ATCC 27750] gi|238872706|gb|ACR72416.1| Hypothetical protein EUBELI_01423 [Eubacterium eligens ATCC 27750] Length = 409 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 55/415 (13%), Positives = 116/415 (27%), Gaps = 40/415 (9%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP Y + N + + A KA S A + SG Sbjct: 4 DELKTPAYVIDEKMLIHNLEILHKVEEDTGCHILLAQKAFSAYAEYPLIGKYISGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R E VF+ D +L FN S+ ++ + Sbjct: 64 IYEARLGAECMGK-ENHVFAPAFTDEDMDELVNICDHVVFNSVSQL------KKHKARCI 116 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 +A ++F + + +T + + + A+ + I Sbjct: 117 EAGVSFGLRVNPEFSTQGDHAIY--DPCAPGSRLGVTLKNLKAALEEEPDVLSGMEGIHF 174 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ++ L+ + ++ +++ ++ GGG +H I Sbjct: 175 HTLCEQNSDDLEATLKAVEEKFGFLMKDMKWVNFGGG----HHITREDYDIETLEKCISH 230 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ +EPG + + G LVT V+ ++ T ++ A Sbjct: 231 VKKKYDVQVYVEPGEAVALNAGYLVTTVLDKVENGITTLILDASAACHMPDVLEMPYTPP 290 Query: 323 INYIVNPAGDRLHI---------------------------HADIVGPICETGDFIALNR 355 + + + + C GD I + Sbjct: 291 LRGGLKISDMEDEYGIDKDIEIDFDMDVKEGIWKPAKNGRYRYRLSSYTCLAGDIIGDYQ 350 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 GD L E Y V++ T+N L ++++ + +++ Sbjct: 351 FGREINVGDRLVFEDMAIYSMVKNNTFNGIQLPDIVIMDSDGECKVWKHFGYEDF 405 >gi|307353001|ref|YP_003894052.1| carboxynorspermidine decarboxylase [Methanoplanus petrolearius DSM 11571] gi|307156234|gb|ADN35614.1| carboxynorspermidine decarboxylase [Methanoplanus petrolearius DSM 11571] Length = 392 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 64/378 (16%), Positives = 118/378 (31%), Gaps = 22/378 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP Y +A++ N S ALKA + V ++ SG S E Sbjct: 23 TPCYLLDLSALKSNGEIISEVAKESGGKALLALKAFAAWPVFPEISKYYSGTCSSSLDET 82 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R E FS K + + FN S+ E Sbjct: 83 RLGFE-EFGGEVHAFSPAYKDCEIEEYIRMCSHLSFNSLSQWERHK------------RT 129 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 ++ + E P L A L G++ + + Sbjct: 130 ILDSEKKVSCGLRVNPEHCEVETAIYNPCRPGSRLGIRAGELENFDFEGIEGLHFHALCE 189 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + + L ++ S ++ ++ GGG I LI ++ Sbjct: 190 NNADA-LERTLDAFEERFASYLDGMKWVNFGGGHHITRKDYDTGL----LIDLIKEFRKK 244 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 C++ +EPG + G L+++V+ IK + ++ A + + + + Sbjct: 245 WGCEVYIEPGEACALNAGWLISEVVDIKDNDGMIAIVDASATAHMP--DVLEMPYRPYIV 302 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + + + GP C +GD I +PGD L Y V++ T+N Sbjct: 303 GSAKPGKKKYTYRLGGPSCLSGDDIGTYSFDCELKPGDKLAFTDMAHYTMVKNTTFNGIR 362 Query: 387 LIPEIMVN--GSQFHIIR 402 L ++ + ++R Sbjct: 363 LPDILLWDPEKDSIEVLR 380 >gi|254467051|ref|ZP_05080462.1| ornithine decarboxylase, putative [Rhodobacterales bacterium Y4I] gi|206687959|gb|EDZ48441.1| ornithine decarboxylase, putative [Rhodobacterales bacterium Y4I] Length = 383 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 70/365 (19%), Positives = 127/365 (34%), Gaps = 24/365 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P +S + + FS F G +V YA+KAN + AV+ L G D+ S E+ Sbjct: 23 PILYFSPRVLHEVARRFSQGFPG---LVTYAVKANPHPAVLSNLVAAGITAFDVASPAEM 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 AA A + ++ ++ EI ++ G+ ++V+ SEL+ L+ S + Sbjct: 80 EAVRAASPDA-VMHYNNPMRSEAEIATGIEHGVASWSVDELSELEKLDAVPRSCE----V 134 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A R + + KFG + L + + + Sbjct: 135 AVRFALPVAGAAYDF------GSKFGAAPEEAVELLKQVAAKGWTPALCFHPGTQCEDEM 188 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI--HQYF 264 + + + + G I ++VGGG A Q F Sbjct: 189 AWVEYVHAAK-----RIVDAAGVRIARLNVGGGFAANRDGVAPDLEKVFAAIGTAADQAF 243 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN-DFMRPTLYDAYHEI 323 G + +I EPGR +V++ L ++ ++K F+ + +R E+ Sbjct: 244 GAEKPTLICEPGRAMVSESFTLAARIKGMRKDGAVVFLNDGIYGGLVDIRDMGLPGRVEV 303 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTY 382 + + GP C++ D + + GD + GAY + S + Sbjct: 304 VGSDGTHRSGVRKPRVVFGPTCDSLDRLPDGLPLPCDCVAGDYVLFPGLGAYSSAMSTQF 363 Query: 383 NSRLL 387 N L Sbjct: 364 NGYGL 368 >gi|220903410|ref|YP_002478722.1| carboxynorspermidine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867709|gb|ACL48044.1| carboxynorspermidine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 406 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 52/377 (13%), Positives = 99/377 (26%), Gaps = 23/377 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL-----GSG 77 + +P + + N ++ + + ALK + L+ G Sbjct: 11 ARIPSPCFVLDENQLSANAAVLNSVQERTGAKILLALKGYAAWGTFPLLSRFKGHGPLWG 70 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 S E R A E F+ + +L + FN ++ Sbjct: 71 ACASSVDEARLARE-EFGGEVHAFAAGWNRREMAELLTLTDHIVFNSTAQWREFAPAIAM 129 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + G+ + IN + G + + + Sbjct: 130 WNKGRCPDRQIQCGLRINPEHSEGAVEIYNPCAPGSRLGIRRKHFDPTAMTGI------- 182 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + + L + + I++GGG I Sbjct: 183 SGLHFHTLCEQGADALERTLAAVESHFGQWLPQCRWINMGGGHHITKPGYDLDLLCRLLT 242 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 +Y + LEPG + D G LV V+ + ++ ++ Sbjct: 243 QWRDRYQAQIY----LEPGEAVALDAGWLVATVLDVIEADMPIAILDIGIPCHMPDVIEM 298 Query: 318 DAYHEINYIVNPAG------DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + Y + A + + G C GD A +PG L E Sbjct: 299 PYRPRVRYEHDGAAVLAGEAGQKAWTCRLAGKSCLAGDVAGEYSFDAPLKPGQRLVFEDM 358 Query: 372 GAYGAVQSGTYNSRLLI 388 Y V++ T+N L Sbjct: 359 AIYSMVKTTTFNGLRLP 375 >gi|196000702|ref|XP_002110219.1| hypothetical protein TRIADDRAFT_53993 [Trichoplax adhaerens] gi|190588343|gb|EDV28385.1| hypothetical protein TRIADDRAFT_53993 [Trichoplax adhaerens] Length = 503 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 81/388 (20%), Positives = 145/388 (37%), Gaps = 38/388 (9%) Query: 15 NVSLEKLAHVVQTP---------FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 N+SL++L T F + I + Y + + YA+K N++ Sbjct: 112 NLSLQELIEKKTTAMDQQFKDDSFMLVNIGNIIERYREWKMRLP--NVEPFYAVKCNNDP 169 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 +++ L +LG D S E++ L A V +RIV++ K + + A ++ I + Sbjct: 170 VLLRILINLGVNFDCASMAEMQLILDAGVHPDRIVYANTIKAVSHLRFAKENNINHTVFD 229 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 +E EL + + + I + S + KFG P + L A Sbjct: 230 NEDELHKIKKYHPNAKLALRICPDMK--------SCESRFQLGIKFGAPERDVAHLLKVA 281 Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 +L + + GV H+GS + KA + + + G++ + +D+GGG + Sbjct: 282 RSLS-LDVMGVSFHVGSDCLNPIGYEKAIIASKKIFKLAEKFGYHFKELDIGGGFTASSA 340 Query: 246 SDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + ++ S + +II EPGRF +V +I + Sbjct: 341 LEMTFEKAAVTISKALQEHFPPESGVRIIAEPGRFFPTRAYTIVLNIIGKRVVRKGNNDP 400 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN---RKIALP 360 D+ + ++ Y VN + G I G FI L+ + Sbjct: 401 FDLEHENAHLYENTSDIEKVLYYVNE---------SVYGSI---G-FITLDPTLIILKPL 447 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 GD +Y E+ GAY V + +NS Sbjct: 448 NAGDWIYFEELGAYSLVLATEFNSFKKP 475 >gi|332300309|ref|YP_004442230.1| carboxynorspermidine decarboxylase [Porphyromonas asaccharolytica DSM 20707] gi|332177372|gb|AEE13062.1| carboxynorspermidine decarboxylase [Porphyromonas asaccharolytica DSM 20707] Length = 388 Score = 109 bits (273), Expect = 8e-22, Method: Composition-based stats. Identities = 52/379 (13%), Positives = 119/379 (31%), Gaps = 16/379 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + + +N + + + A KA + S E Sbjct: 11 TPYYLLEESLLRRNLELIRSVAERAGVEIILAFKAYALWRTFPIFKEYIHASTASSPWEA 70 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R V + ++ + S ++ + + ++ Sbjct: 71 RLGYEEMGAP---VHAYTPAYSEDNITDFVHYSSHITLNSPTQWQRFGPASPYAAEQISY 127 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+N + + + +FG+ + + + + GV +H+ + D Sbjct: 128 GLRLNLAYSPVKTEIYNPALPGTRFGVSAETLRQMEQEGALTG---LEGVHLHVLCEGDD 184 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + +L L ++ +Q +++GGG + + + A L + Sbjct: 185 ----EQLELVLERLEERFGFILDKVQWLNLGGGHLMTHREYD---TEHLVALLRAFRERH 237 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++I+EPG G L +V+ I + I++V+ M L YH + Sbjct: 238 PNLRVIMEPGSAFAWQTGDLYAQVVDIVTNDGIKTAIMNVSFACHMPDCLEMPYHPVVEG 297 Query: 327 VNPAGDRL--HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 + G C +GD++ G+ L ++ Y V++ +N Sbjct: 298 ATQCDTPEAGTHSYRLGGNSCLSGDYMGYWTFDHPLEIGETLVLKDMLHYTTVKTNMFNG 357 Query: 385 RLLIPEIMVN-GSQFHIIR 402 + + ++R Sbjct: 358 VQHPAIALRHLDGSVEMLR 376 >gi|111225759|ref|YP_716553.1| putative diaminopimelate decarboxylase protein [Frankia alni ACN14a] gi|111153291|emb|CAJ65043.1| putative diaminopimelate decarboxylase protein [Frankia alni ACN14a] Length = 476 Score = 109 bits (273), Expect = 8e-22, Method: Composition-based stats. Identities = 90/437 (20%), Positives = 153/437 (35%), Gaps = 69/437 (15%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI------------- 68 A Y Y T +N G +C+A+KAN V+ Sbjct: 33 AAEFS--AYLYDPTVAARNAAALRGCLPGW-AELCFAVKANGFPPVLDALLRGAAAAGTP 89 Query: 69 --------------------------------KTLAHLG--SGLDIVSEGE--LRRALAA 92 + G G ++ S GE L A Sbjct: 90 ADIQLADIRAHGPGAGGGPDPSVGPGASGGPDPRVCGHGGVDGFEVSSVGETRLALAAYG 149 Query: 93 PVPAERI---VFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 V R V SG K+ + +++G+ NVES EL+ L A G++ +A R Sbjct: 150 RVAPARSPYLVASGPAKSSTLLTALVEAGVSIVNVESPGELRRLEAVAARFGRRVTVAVR 209 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VNP A G+ FG+P ++ ++ A LP + ++G +H S + Sbjct: 210 VNPARVALAGSLQMGGRPS-AFGVPESEVPAVLDLARRLPHLDVAGFHVHAVSGNLDAAA 268 Query: 210 FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR----PPSSSDYASLIHQYFG 265 + + ++ ++ + GG R P + + + Sbjct: 269 HLDYVRWCLEFAERTAADAGIDLRVVDVGGGLGVPFEPDRRGERPFDLDRFGEGLARLPV 328 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++I+EPGR LVAD G +VI +K+S FV+L ++ F PT ++ H Sbjct: 329 PPGVRMIIEPGRLLVADCGWYAAEVIDVKRSYGTDFVVLRGGIHHFALPTSWEIVHNFAV 388 Query: 326 IVNPAGDRLH--------IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + P +VG +C D +A + + RPGD++ GAYG Sbjct: 389 VAGPTSTAAEDKGVDTAGRPVTVVGELCTPEDTLARDITVGPVRPGDVVVFPMAGAYGYE 448 Query: 378 QS-GTYNSRLLIPEIMV 393 + + +++ Sbjct: 449 FALADFLGHPRPARVVL 465 >gi|118590930|ref|ZP_01548330.1| ornithine decarboxylase [Stappia aggregata IAM 12614] gi|118436452|gb|EAV43093.1| ornithine decarboxylase [Stappia aggregata IAM 12614] Length = 406 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 98/366 (26%), Gaps = 15/366 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P YC+ ++ + F + F G YA+K N V++ LA G D+ S E Sbjct: 19 PVYCFRPDVLKHDAQQFQSLFPG---KTAYAVKTNGEPFVLEALAKAGISCFDVASPAEF 75 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A AE + + D GI +++ E E+ + + +L Sbjct: 76 ASVKKAAPKAEMLYMHPIKAQSDIRLALETYGIRTLSLDHEDEVAKILRIVRALDIDPGT 135 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + KFG L + + + + + Sbjct: 136 ITLFVRIATKGHAAY----ELSKKFGAAPGHAVELLQRINRIGFKCGLCFHVGSQIEEPE 191 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 A + ++ P+ + + Sbjct: 192 TYERALASADWIRSRAGVPIVELDVGGGFPAVYGHDPRRKVPEMPTLEALMGQLKADIAD 251 Query: 267 LQC---KIILEPGRFLVADVGILVTKV---ISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 Q ++ EPGR +VA L+ +V + + Sbjct: 252 WQFDDLPLVAEPGRVIVARSISLIVRVLLKKGRRLYINDGIWASLSDSWTGKITLPARFI 311 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQS 379 + + + G C++ D ++ + GD + I GAY Sbjct: 312 PDPARKTRAGQPDKIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLR 371 Query: 380 GTYNSR 385 +N Sbjct: 372 TRFNGF 377 >gi|313886522|ref|ZP_07820238.1| carboxynorspermidine decarboxylase [Porphyromonas asaccharolytica PR426713P-I] gi|312924068|gb|EFR34861.1| carboxynorspermidine decarboxylase [Porphyromonas asaccharolytica PR426713P-I] Length = 388 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 53/379 (13%), Positives = 119/379 (31%), Gaps = 16/379 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + + +N + + + A KA + S E Sbjct: 11 TPYYLLEESLLRRNLELIRSVAERAGVEIILAFKAYALWRTFPIFKEYIHASTASSPWEA 70 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R V + ++ + S ++ + + + Sbjct: 71 RLGYEEMGAP---VHAYTPAYSEDNITDFVRYSSHITLNSPTQWQRFGPASPYAAEHISY 127 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+N + + + +FG+ + + + + GV +H+ + D Sbjct: 128 GLRLNLAYSPVKTEIYNPALPGTRFGVSAETLRQMEQEGTLTG---LEGVHLHVLCEGDD 184 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + +L L ++ +Q +++GGG + + + A L + Sbjct: 185 ----EQLELVLERLEERFGFILDKVQWLNLGGGHLMTHREYD---TEHLVALLRAFRERH 237 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++I+EPG G L +V+ I + D I++V+ M L YH + Sbjct: 238 PNLRVIMEPGSAFAWQTGDLYAQVVDIVTNDDIKTAIMNVSFACHMPDCLEMPYHPVVEG 297 Query: 327 VNPAGDRL--HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 + G C +GD++ G+ L ++ Y V++ +N Sbjct: 298 ATQCDTPEAGTHSYRLGGNSCLSGDYMGYWTFDHPLEIGETLVLKDMLHYTTVKTNMFNG 357 Query: 385 RLLIPEIMVN-GSQFHIIR 402 + + ++R Sbjct: 358 VQHPAIALRHLDGSVEMLR 376 >gi|213513938|ref|NP_001133877.1| Antizyme inhibitor 1 [Salmo salar] gi|209155670|gb|ACI34067.1| Antizyme inhibitor 1 [Salmo salar] Length = 449 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 72/379 (18%), Positives = 134/379 (35%), Gaps = 30/379 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + ++ + M YA++ANS+ AVI+ LA L +G ++ EL Sbjct: 40 FFVADLGVLMRQHVRWRTHMPQM--RPFYAVQANSSLAVIEILAALSTGFICTNKYELEL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP+E I++SGV K + +I A ++GI ++E+EL+ + + +A Sbjct: 98 VQGYGVPSEDIIYSGVCKQLSQIKYAAKNGIDFLVCDNEAELRKIARCHPRAKLLLEVA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + FG + L A L ++ GV H+ S D + Sbjct: 157 ---------TEASSEGEEMGMMFGSKLKDCRHLLESAKELGL-QVVGVRFHVPSTCDDPQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A R + G ++ +D+GGG + + S+ L + + Sbjct: 207 AYSHAVSDARCVFDMGEDIGFSMTILDIGGGFNGSETQLKQINSAVR-PLLDLYFPASSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVIS----------------IKKSADKTFVILDVAMNDFM 312 I+ EPG + V+ L +I+ + + + D F Sbjct: 266 VSIMAEPGSYYVSSSFTLAVNIIAKEVGARDLHGNHDEPSPNDEPEFLYYMNDGVYGSFT 325 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + + + + + GP + D + + GD L G Sbjct: 326 SKLADNVIPAPALPKSGVSEEPVFASSLWGPSGDELDQVVDQCLLPELSVGDWLIFNNAG 385 Query: 373 AYGAVQSGTYNSRLLIPEI 391 AY T+ P Sbjct: 386 AYCLGPQSTFTDSTRPPVY 404 >gi|126740708|ref|ZP_01756394.1| Putative Ornithine decarboxylase [Roseobacter sp. SK209-2-6] gi|126718223|gb|EBA14939.1| Putative Ornithine decarboxylase [Roseobacter sp. SK209-2-6] Length = 383 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 69/365 (18%), Positives = 128/365 (35%), Gaps = 24/365 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGEL 86 P +S + F F +V YA+KAN + AV+ L G D+ S E+ Sbjct: 23 PILYFSPRVLHHVAERFQAGF---GGLVTYAVKANPHPAVLSNLVAAGINAFDVASPAEM 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A A + ++ ++ +EID ++ + ++V+ SEL+ L+ S I Sbjct: 80 EAVRTASAEA-VMHYNNPMRSREEIDAGIKYDVASWSVDELSELEKLHAVPRSKE----I 134 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A R ++ + KFG + L + Q Sbjct: 135 AVRFALPVSGAAYDF------GSKFGAAPLEAVELLKRVAAEGWTPALCFH-----PGTQ 183 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD--YASLIHQYF 264 E + + + + + G I ++VGGG + + F Sbjct: 184 CEDEAAWVEYIHAAKRIVDAAGVPIARLNVGGGFAANRDGEAPDLERVFSAINLATQEAF 243 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN-DFMRPTLYDAYHEI 323 G + ++I EPGR +V++ L ++ ++K + F+ + +R E+ Sbjct: 244 GAQRPQLICEPGRAMVSESFTLAARIKGMRKGGEVIFLNDGIYGGLVDIRDMGLPGRVEV 303 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTY 382 + GP C++ D + + R GD + GAY + S + Sbjct: 304 VNADGQHRQGERRPRVVFGPTCDSLDRLPDGLPLPEDTRTGDYVLFPGLGAYSSAMSTQF 363 Query: 383 NSRLL 387 N L Sbjct: 364 NGYGL 368 >gi|218263199|ref|ZP_03477397.1| hypothetical protein PRABACTJOHN_03080 [Parabacteroides johnsonii DSM 18315] gi|218222875|gb|EEC95525.1| hypothetical protein PRABACTJOHN_03080 [Parabacteroides johnsonii DSM 18315] Length = 240 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 119/199 (59%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPFY Y +++ YA+KAN+N ++ +A G G D VS GE+ Sbjct: 39 TPFYFYDIKLLKETLNMVKTEAGKYGYHAHYAVKANANPRILSVIAEYGLGADCVSGGEI 98 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + AL A PA +IV++GVGK EI+L L + I+CFNVES +EL+ L++ A + K API Sbjct: 99 QAALDAGFPACKIVYAGVGKADWEINLGLDNDIFCFNVESAAELEILDELAAAKNKVAPI 158 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A R+NP+++A+TH KI+TG KE+KFGI + Q+ + S L +K+ G+ HIGSQI Sbjct: 159 ALRINPEVDAHTHAKITTGMKENKFGINLSQLGQVLDLVSHLEHIKLIGIHCHIGSQITD 218 Query: 207 IESFHKAFKLLRDLTQQLR 225 + +F + ++ + + Sbjct: 219 MAAFRGLVIRVNEIRKNWK 237 >gi|83854922|ref|ZP_00948452.1| NspC, carboxynorspermidine decarboxylase [Sulfitobacter sp. NAS-14.1] gi|83842765|gb|EAP81932.1| NspC, carboxynorspermidine decarboxylase [Sulfitobacter sp. NAS-14.1] Length = 364 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 46/390 (11%), Positives = 106/390 (27%), Gaps = 39/390 (10%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + ++ N + + ALK + +V +A G S E+ Sbjct: 3 TPYYLIDKSRLQANMEKIAWLREASGAKSLLALKCFATWSVFDFMAQYMDGSTSSSLYEV 62 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + + + E+ + + + + Sbjct: 63 KLG---------------------YEKFGGETHAYSVAYDDDEIAEVLANSDKIIFNSIG 101 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI----SGVDMHIGS 202 +A + + + ++ +I + + Sbjct: 102 QLDRFDAASAGHTRGLRVNPGVSTSEFDLADPARPFSRLGEHDPAQIAAVADRITGLMFH 161 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + F + +L + + H + I +GGG+ H A+ + Sbjct: 162 NNCENDDFDRFADMLTLIEDRFGDTIHRMDWISLGGGI----HFTGEGYPLDRLAARLKT 217 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ LEPG + L T V+ + ++ + +Y Sbjct: 218 LSDTYGVQVYLEPGEAAITGAATLETTVLDTLHNGKNLAIVDSSIEAHMLDLLIY----- 272 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 A + I G C GD + +PGD + + Y V+ + Sbjct: 273 -REPAKVAPNTGDHDWMICGKSCLAGDIFGEFKFDTPLKPGDRISFQDAAGYTMVKKNWF 331 Query: 383 NSRLLIPEIMVN--GSQFHIIRPRMTFQEL 410 N + I + +R +++ Sbjct: 332 NGVKMPG-IAIRELDGTITSVRS-FDYEDF 359 >gi|224024113|ref|ZP_03642479.1| hypothetical protein BACCOPRO_00832 [Bacteroides coprophilus DSM 18228] gi|224017335|gb|EEF75347.1| hypothetical protein BACCOPRO_00832 [Bacteroides coprophilus DSM 18228] Length = 374 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 57/386 (14%), Positives = 110/386 (28%), Gaps = 27/386 (6%) Query: 34 TTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAP 93 + KN D + A KA + S E LA Sbjct: 3 EKLLRKNLSLIKQVADQAGVEIILAFKAFAMWKSFPIFREY-IRFTTASS-EYEARLAYE 60 Query: 94 VPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD 153 R T + S S+ + A + + RVNP+ Sbjct: 61 EFGSRAHAYSPAYTEQNF-PSFLKYCSHITFNSLSQFERFYPMAAAASEPISCGLRVNPE 119 Query: 154 INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKA 213 + + + +FG+ Q+ + + S ++ Sbjct: 120 YSEVEVELYNPCAPGTRFGVMADQLPDV-----------LPEGIEGFHCHCHCESSSYEL 168 Query: 214 FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL 273 + L+ + ++ ++ +++GGG + + L +IIL Sbjct: 169 ERTLQHIEEKFSRWFPQLKWLNLGGGHLMTRKDYD---TEHLIGLLKGLKQRYPHLQIIL 225 Query: 274 EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR 333 EPG G LV V+ I ++ ILDV+ M L Y Sbjct: 226 EPGSAFTWQTGPLVASVVDIVENRGIRTAILDVSFTCHMPDCLEMPYQPAVRGAETLPAD 285 Query: 334 LHIH-------ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + G C +GD++ + + G+ + E Y V++ +N Sbjct: 286 AVKTASPGDHIYRLGGNSCLSGDYMGSWKFDHELQIGERIIFEDMIHYTMVKTNMFNGIH 345 Query: 387 LIPEIMV-NGSQFHIIR--PRMTFQE 409 ++ + I R +++ Sbjct: 346 HPSVALLHEDGELEIYRNFRYEDYRD 371 >gi|270340059|ref|ZP_06006901.2| carboxynorspermidine decarboxylase [Prevotella bergensis DSM 17361] gi|270332813|gb|EFA43599.1| carboxynorspermidine decarboxylase [Prevotella bergensis DSM 17361] Length = 393 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 57/411 (13%), Positives = 111/411 (27%), Gaps = 37/411 (9%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 L E P Y + KN ++ + V A KA + Sbjct: 4 NVLTFEG---------FNRPAYILEEAKLRKNLQLITHVAKEANIEVILAFKAFALWKTF 54 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + S E R V + D + S S Sbjct: 55 PIFREYIHSVTASSLSEARLGREEFGTP---VHAYSPAYTDYEIDTIARCSSHLTFNSLS 111 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 ++ R + + R+NP+ + + +FG+ ++ Sbjct: 112 QMTRYMPRVKQINPTISLGLRINPEYSEIDNILYDPCAPGSRFGVRAEKLPDRLTDGID- 170 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 + + L + Q+ I+ I+ GGG + Sbjct: 171 ----------GFHCHCHCENNADVFQRTLEHIEQKFSKWFTQIKWINFGGGHLMTKKGYD 220 Query: 249 RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 + + +ILEPG + + G LV++V+ I + IL+V+ Sbjct: 221 TELLIRLLN---NFHKRYPHLHVILEPGSAFLWETGPLVSQVVDIVEDKSIRTAILNVSF 277 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRL---------HIHADIVGPICETGDFIALNRKIAL 359 M L Y + G C +GDF+ Sbjct: 278 ACHMPDCLEGPYWPSVRGAKTYESPDGSMVKTAGTKNVYRLGGNSCLSGDFMGYWEFDHE 337 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE-IMVNGSQFHIIRPRMTFQE 409 G + +E Y V++ +N + + ++R ++++ Sbjct: 338 LHVGQNVILEDMIHYTTVKTNMFNGVSHPSIFLARENGELELLRE-YSYED 387 >gi|306822088|ref|ZP_07455471.1| diaminopimelate decarboxylase [Bifidobacterium dentium ATCC 27679] gi|309802513|ref|ZP_07696618.1| diaminopimelate decarboxylase [Bifidobacterium dentium JCVIHMP022] gi|304554637|gb|EFM42541.1| diaminopimelate decarboxylase [Bifidobacterium dentium ATCC 27679] gi|308220830|gb|EFO77137.1| diaminopimelate decarboxylase [Bifidobacterium dentium JCVIHMP022] Length = 524 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 24/252 (9%) Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ-QLRSNGHNIQHIDVGGGLGIAYH 245 +++ GV HIGS I ++F +A K + L + ++ + + +D+GGG +AY Sbjct: 272 HQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYT 331 Query: 246 SDHRPPSSS-------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-------- 290 D + +++ G I EPGR+ VA G+ + +V Sbjct: 332 DGEDSMDIDVELGRLADAVTTVNRALGMPAPVISFEPGRWTVAPTGVTLYRVGTVKPVRL 391 Query: 291 ------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 + ++ +V +D M+D +RP LY + + + N G +VG Sbjct: 392 NGDATDKAGNPVHERVYVSVDGGMSDNIRPALYGSDY-TARLANRKGSDDTKLCRVVGMH 450 Query: 345 CETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 CE+GD + ++ GD+L + TG YG + YN L+ + + + H++ Sbjct: 451 CESGDIVVNEVRLPADITRGDILAVPVTGVYGRTMASNYNQALIPAVVGIGETDAHVMIR 510 Query: 404 RMTFQELIELDS 415 R + +L+ D Sbjct: 511 RQSIDDLLSWDV 522 Score = 96.8 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 4/172 (2%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFS----NAFDGMDTMVCYALKANS 63 G + + E L +P Y T + F NAF+ T V +A KA Sbjct: 16 NGEITFHGRTAESLLDEFGSPLYVIDTDEVRARASKFVTSASNAFNNTVTHVSFAGKALL 75 Query: 64 NQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 ++ + + + G +D + GE+R ALAA VP R+V G K+ +EI LA++ G Sbjct: 76 SKEICRIVTEAGMLIDTCTMGEMRIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIV 135 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 V+ +E + A LGK+A + RV I+A H+ +ST ++ KFG+ + Sbjct: 136 VDEPNEPARIADIAKRLGKRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 187 >gi|163761494|ref|ZP_02168567.1| putative carboxynorspermidine decarboxylase protein [Hoeflea phototrophica DFL-43] gi|162281338|gb|EDQ31636.1| putative carboxynorspermidine decarboxylase protein [Hoeflea phototrophica DFL-43] Length = 365 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 59/380 (15%), Positives = 117/380 (30%), Gaps = 30/380 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 QTP+Y + + N + + ALK + V + G S E Sbjct: 3 QTPYYLVDKSKLLVNMEKIATLRELSGAKALLALKCFATWGVFDFMRDYMDGTTSSSLNE 62 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R E +S + ++ + FN + R S Sbjct: 63 VR-LGHTRFGKETHAYSVAYADHEIDEVVSHADKIIFNSIGQL------TRFGSQSAGII 115 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 R+NP ++++T + + G + A P +++ + + Sbjct: 116 RGLRLNPGVSSSTFDLADPARPFSRLGE--------WDLAKVEPVMEL--ISGFMIHNNC 165 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + F K+L D+ Q+ + + +GGG+ H +A + ++ G Sbjct: 166 ENGDFDLFDKMLGDIEQKFGPLLKKAEWVSLGGGI----HFTGEDYPLEKFAERLKRFSG 221 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + ++ LEPG + + L V+ + V+ + +Y Sbjct: 222 DFGVQVYLEPGEAAITNSTTLEVTVLDKLYNGKDLVVVDSSIEAHLLDLLIY------RE 275 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D+ + G C GD GD + I+ T Y V+ +N Sbjct: 276 SAKVHPDQGPHRYMVCGKSCLAGDIFGEFDFPEELNIGDRISIQDTAGYTMVKKNWFNGV 335 Query: 386 LLIPEIMVN--GSQFHIIRP 403 + I + +R Sbjct: 336 QMPA-IAIRELDGSLRTVRE 354 >gi|323456327|gb|EGB12194.1| hypothetical protein AURANDRAFT_61431 [Aureococcus anophagefferens] Length = 1068 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 81/414 (19%), Positives = 142/414 (34%), Gaps = 23/414 (5%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 Y A E AF G A K+N +++ A LG G++ S E A+ Sbjct: 349 YDLDAWETQLRACVGAF-GPTFEHAIACKSNPLALMLRRAAELGFGVECASATEAAHAVE 407 Query: 92 AP-VPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES-ELKTLNQRAVSLGKKAPIAFR 149 A V R+VF KT E+ AL++G++C + + T + + R Sbjct: 408 ACGVAPGRVVFDSPCKTRVELAYALETGLHCNLDNLDELDRATEIVARMGRPPAGRVGVR 467 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VNP + A T +S KFG+ I + + +H+ + Sbjct: 468 VNPRVGAGTIAALSVSTSASKFGVDIGDAAQRADLLAKFA-ARPWLTSVHVHVGSGGMGL 526 Query: 210 FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF---GN 266 + + + N GG + P + YA+L+ + Sbjct: 527 GQLVAGVAAAVAFANDARETNAVACVDIGGGLPVDYGSDAAPDFAGYAALLRDATPELFD 586 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ E G L A G L +++ +K + I+ + +R + Sbjct: 587 GTYAVVTEFGASLNAKSGFLASRIEWLKDQPTRRLAIVHFGADLCLRQAYTADHGRRWAA 646 Query: 327 VN-----PAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSG 380 + D A I GP+C GD +A + K+ R GDL+ + GA Sbjct: 647 FDAAGRAFPHDAPLADAAIGGPLCFQGDILADDLKLPAALRAGDLVVMRDAGANSLSLFS 706 Query: 381 TYNSRLLIPEIMVNGSQFHIIRPRMT-----FQELIELDSIPAWLQKTPKQSSE 429 + SR+ P F + R + L+ +P ++ + + E Sbjct: 707 RHCSRVAPPVY-----GFRTVARRDDDAVPHIDDRDPLELVPLKPRERREDAPE 755 >gi|302517698|ref|ZP_07270040.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78] gi|302426593|gb|EFK98408.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78] Length = 480 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 3/199 (1%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 +G + V L A TP Y + + AF V YA KA +A+ Sbjct: 23 DGDVRVGGVPLTSAAERYGTPLYVLDEDQVRARARAYRAAFPDAG--VHYAAKAFLCRAL 80 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ L GLD+ S GEL A+AA PA+R++ G K+ ++ AL+ G+ ++ Sbjct: 81 VRWLDEEDIGLDVCSAGELELAVAAGFPADRVLLHGNAKSPRDLASALRLGVGRVVLDGV 140 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 E+ L + + RV P I+A H K+ TG ++ KFG+ + + +A A Sbjct: 141 GEITRLAALVPPGE-RQRVLVRVVPGISAGHHDKVRTGDEDQKFGLSLTDGSAQHAVARV 199 Query: 188 LPGVKISGVDMHIGSQIDQ 206 L ++ + ++ Sbjct: 200 LATPRLELTGTALPHRLAD 218 >gi|315497323|ref|YP_004086127.1| orn/dap/arg decarboxylase 2 [Asticcacaulis excentricus CB 48] gi|315415335|gb|ADU11976.1| Orn/DAP/Arg decarboxylase 2 [Asticcacaulis excentricus CB 48] Length = 422 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 113/357 (31%), Gaps = 14/357 (3%) Query: 41 YLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGELRRALAAPVPAERI 99 F F+G V YA+KAN + VI+TL G D+ S E++ A Sbjct: 32 AQWFQRHFNG---DVFYAVKANPSSWVIETLLDGGISSFDVASINEVKLVRGLAPEARLA 88 Query: 100 VFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTH 159 V + G+ F++++ EL+ + I + T Sbjct: 89 FMHPVKSRRAIAEAYSDFGVKTFSLDTHEELQKILDATGGAKDLNLI-------VRLATS 141 Query: 160 KKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD 219 + S +KFG ++ +L A GV H+GSQ + ++ A Sbjct: 142 GEGSNLPLTNKFGAQPYEAPALLLAARQ-ATQDRMGVSFHVGSQCMRPTAYAAAMSAASR 200 Query: 220 LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFL 279 + + + P + + ++ EPGR L Sbjct: 201 ALVRAGVLADIVDVGGGFPSVYPGMVPPSLPEYMDVIHRAFDEMKVHEATELWAEPGRSL 260 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 VA+ ++ +V K A + D + ++ + Sbjct: 261 VAESTSILARVELRKGDALYLNDGAYGNLFDAT-HAKWPFPVRLHRAEDGDEQPELKPFR 319 Query: 340 IVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 GP C++ D + + GD + I GAYG + +N + ++ Sbjct: 320 FYGPTCDSIDHMPGPFWLPADVEEGDYVEIGMLGAYGVAMTTEFNGYGQTETVFLDD 376 >gi|254503042|ref|ZP_05115193.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Labrenzia alexandrii DFL-11] gi|222439113|gb|EEE45792.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Labrenzia alexandrii DFL-11] Length = 406 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 97/366 (26%), Gaps = 15/366 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIVSEGEL 86 P YC+ + + + F F G YA+K N V+K LA G D+ S E Sbjct: 19 PIYCFRPSVLRADAQNFKKLFPG---KTAYAVKTNGEPFVLKELAAAGYDCFDVASPAEF 75 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A AE + + D Q GI +++ E E+ + + +L Sbjct: 76 AAVREASPKAEMLYMHPIKAQSDIRLALEQYGIRVMSLDHEDEVAKILRIVRALDIDPAK 135 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + KFG L + + + + Sbjct: 136 ITLFVRIATKGHAAY----ELSKKFGAAPGHAVELLQRIHRIGFKCGLCFHVGSQIEEPE 191 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ---Y 263 A + ++ P+ + I Sbjct: 192 TYERALASADWIRSRAGVPIVELDVGGGFPAVYGHDPRRKVPDLPTLEELMGQIRSDIAE 251 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKV---ISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + ++ EPGR +VA L+ +V + + Sbjct: 252 WAFDDIPLVAEPGRVVVARSISLIVRVLLKKGRRLYINDGIWASLSDSWTGKITLPARFI 311 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQS 379 + + + G C++ D ++ + GD + I GAY Sbjct: 312 PDPARRTRSGKAGNIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLR 371 Query: 380 GTYNSR 385 +N Sbjct: 372 TRFNGF 377 >gi|149202269|ref|ZP_01879242.1| Putative Ornithine decarboxylase [Roseovarius sp. TM1035] gi|149144367|gb|EDM32398.1| Putative Ornithine decarboxylase [Roseovarius sp. TM1035] Length = 376 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 69/375 (18%), Positives = 128/375 (34%), Gaps = 25/375 (6%) Query: 26 QTP---FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 QTP +S ++ F F G +V YA+KAN V+ L G D+ Sbjct: 17 QTPDAALLYFSPDQLQATAQAFQAGFPG---LVTYAVKANPGAEVLANLVAAGITAFDVA 73 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E+R + PA + ++ +++ EI++A Q G+ ++++ E L++ + Sbjct: 74 SPEEMRAVR-SVCPAAVLHYNNPVRSVPEIEVAAQMGVRSYSIDDLRE---LDKLTGRIA 129 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 A I R+ + + FG A + + M Sbjct: 130 PDAEITVRLALPVRGAAYD----------FGAKFGVGPERAAELLRVVADRGFTPSMTFH 179 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP--SSSDYASL 259 + + + RS G + ++VGGG + + Sbjct: 180 PGTQCADPVAWGAYIGVVA-EVARSAGVRLARLNVGGGFASHRTGTMPNLGAIFTHIGAE 238 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + + FG ++ EPGR +VA+ L +V +++++ +R Sbjct: 239 VARVFGADAPALVCEPGRAMVAEAFSLAVRVKALRETGAIFVNDGVYGGLTEIRDIGAPD 298 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQ 378 + + GP C++ D + + GD L I GAY Sbjct: 299 RITVLAPDGTPRTGAPHPRVVFGPTCDSIDRLPDPLPLPGDLAEGDYLLIAGMGAYTRCL 358 Query: 379 SGTYNSRLLIPEIMV 393 S +N L + V Sbjct: 359 STDFNGYGLRDVVTV 373 >gi|240172617|ref|ZP_04751276.1| putative S-adenosylmethionine decarboxylase [Mycobacterium kansasii ATCC 12478] Length = 647 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 75/393 (19%), Positives = 128/393 (32%), Gaps = 43/393 (10%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+ + N A + YA+KAN + V++ LA G+ D+ S GE+ Sbjct: 4 TPYLTIDLARVRDNLQALRAALPE--ASIRYAVKANPGEPVLRLLAGEGAEFDVASVGEI 61 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A + R+ F K + A SG+ F ++ L + + A + I Sbjct: 62 DACRLAGIDGSRLAFGNTIKKPAAVGHAYASGVRRFVFDTHEGLAAIAEHAPGASVECRI 121 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A + KFG L A L ++ + H+GSQ Sbjct: 122 APAFPSSV----------TPFGHKFGCAPDAAAGLLTRARRLG-LRPVAIAFHVGSQQLD 170 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 A+ L + ++ GGG + Y + A Sbjct: 171 P----AAWDLGIRCCADIFEQLGGALEVNAGGGFPVPYATVAPQLPVLADAITSALTRYF 226 Query: 267 --LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + ++++EPGR LV GI+ +V+S++ D + + Y Sbjct: 227 GADRPRLVVEPGRLLVGSAGIIAAEVVSVRTGTDGRRWVYLDIGRYGGLAETENEYIRYR 286 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEK----------TGA 373 + GD A + GP C+ D + + + + R GD + IE Sbjct: 287 LRTDRDGDPA-ADAVVAGPTCDGDDVLYRSYALPVTLRAGDGVQIEDAGAYAASYASV-- 343 Query: 374 YGAVQSGTYNSRLLIPEIMVNG---SQFHIIRP 403 +N +P +NG I Sbjct: 344 -------EFNGFPPLPTYFMNGTGPGAARAIVE 369 >gi|303237287|ref|ZP_07323857.1| carboxynorspermidine decarboxylase [Prevotella disiens FB035-09AN] gi|302482674|gb|EFL45699.1| carboxynorspermidine decarboxylase [Prevotella disiens FB035-09AN] Length = 387 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 104/380 (27%), Gaps = 21/380 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + N S D + A KA + S E + Sbjct: 14 PTYILEEAKLRNNLSLISKVAKEADIEIILAFKAYALWRTFPIFREYIKATTASSLYEAK 73 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 D + S S+ + + K+ I Sbjct: 74 LGFQEFGAPTHTFS---PAYTDYEIDEIARCSSHLVFNSLSQYNRFHAHIKQINKETSIG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNP+ + + +FG+ ++ Sbjct: 131 LRVNPEYSEVETLLYNPCAPGTRFGVSADKLPKTLPNDI-----------EGFHVHCHCE 179 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + Q+ I+ I+ GGG + P + +Y Sbjct: 180 NGSDVFERTLAHIEQKFSPWFSQIKWINFGGGHLMTRKDYDIPRLIKLLKTFKEKYPWL- 238 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 K+ILEPG G LV +++ I + IL+V+ M L Y Sbjct: 239 --KVILEPGSAFAWQTGSLVAQIVDIVEDKGIQTAILNVSFTCHMPDCLEMPYQPTVRNA 296 Query: 328 NPAGDRLHI---HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 + + G C +GD++ G+ + E Y V++ +N Sbjct: 297 ACVEEIEQHATNTYRLGGNSCLSGDWLGYWHFDHALEIGENIIFEDMLHYTTVKTNMFNG 356 Query: 385 RLLIPEIMVN-GSQFHIIRP 403 +++ ++ I+R Sbjct: 357 ITHPGIALLHPNNELEILRQ 376 >gi|228470071|ref|ZP_04054980.1| carboxynorspermidine decarboxylase [Porphyromonas uenonis 60-3] gi|228308209|gb|EEK17064.1| carboxynorspermidine decarboxylase [Porphyromonas uenonis 60-3] Length = 388 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 52/379 (13%), Positives = 115/379 (30%), Gaps = 16/379 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + + +N + + + A KA + S E Sbjct: 11 TPYYLLEESLLRRNLELIRSVAERAGVEIILAFKAYALWRTFPIFKEYIHASTASSPWEA 70 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R V + +E + S ++ + + + Sbjct: 71 RLGYEEMGAP---VHAYTPAYSEENIADFVRYSSHITLNSPTQWQRFGPASPYAAEHISY 127 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+N + + + +FG+ + + + + + GV +H+ + D Sbjct: 128 GLRLNLAYSPVKTEIYNPALPGTRFGVSAETLQQMEQEGALIG---LEGVHLHVLCEGDD 184 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + +L L ++ +Q +++GGG + + + Sbjct: 185 ----EQLELVLERLEERFGFILDKVQWLNLGGGHLMTHREYDTEHLVVLL---RAFRERH 237 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +II+EPG G L +V+ I + I++V+ M L YH + Sbjct: 238 SNLRIIMEPGSAFAWQTGDLYAQVVDIVTNDGIKTAIMNVSFACHMPDCLEMPYHPVVEG 297 Query: 327 VNPAGDRL--HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 + G C +GD++ G+ L ++ Y V++ +N Sbjct: 298 ATQCDTPEPGTHSYRLGGNSCLSGDYMGYWTFDHPLEIGETLVLKDMLHYTTVKTNMFNG 357 Query: 385 RLLIPEIMVN-GSQFHIIR 402 + + +R Sbjct: 358 VQHPAIALRHLDGSVETLR 376 >gi|225387699|ref|ZP_03757463.1| hypothetical protein CLOSTASPAR_01469 [Clostridium asparagiforme DSM 15981] gi|225046204|gb|EEG56450.1| hypothetical protein CLOSTASPAR_01469 [Clostridium asparagiforme DSM 15981] Length = 298 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 90/276 (32%), Gaps = 11/276 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y I +N + AF +A+KA N +++ L G Sbjct: 21 LEEIVKDYPTPFHLYDEKGIRENAMKLKQAFAWNKGFKEYFAVKATPNPFILQLLKECGC 80 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S EL + A E I+FS +E A + G + + Sbjct: 81 GTDCSSMTELMLSEACGFSGEEIMFSSNDTPPEEFAYAARLGAIINLDDFTHIQFLED-- 138 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I+ R NP I + K+G+ Q+ + + Sbjct: 139 -TLGYIPETISCRFNPGGVFKISNDIMDNPGDSKYGMTTEQMFEAFKILKAKGAKRFGIH 197 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + + A +L + G +I I++ GG+GI Y D P Sbjct: 198 AFLASNTVTNEYYPLLARQLFELAVKLKEETGAHIAFINLSGGIGIPYRPDQEPNDILVI 257 Query: 257 ASLIHQYFG-------NLQCKIILEPGRFLVADVGI 285 + + + E GRF++ G Sbjct: 258 GEGVRNAYQDVLVPAGMGDVALCTELGRFMLGPFGC 293 >gi|260752528|ref|YP_003225421.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551891|gb|ACV74837.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 393 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 122/360 (33%), Gaps = 19/360 (5%) Query: 39 KNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAE 97 + F F G YA+KAN + A+I++L G D+ S E+R A Sbjct: 30 RAARFFIEKFAG---KTMYAVKANPSPALIRSLWDAGITQYDVASANEVRLVRHLLPKAT 86 Query: 98 RIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL-NQRAVSLGKKAPIAFRVNPDINA 156 + V + + G+ F+++++ EL + + + RV+ D + Sbjct: 87 LCFMNPVKAEEVIREAYFEHGVRAFSLDNQDELDKILRATDYAKDLTLCVRLRVSSDHS- 145 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL 216 KFGI Q SL A G+ H+GSQ +++ +A L Sbjct: 146 -------KLSLASKFGIDPAQSASLLMAARQAS--DALGICFHVGSQAMSPQAYIQAMAL 196 Query: 217 LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPG 276 RD Q I + + + ++ EPG Sbjct: 197 ARDAIVQAGVTVDVIDVGGGFPSIYPDLEPQNLENYFHSIHEAFESLPISYSAELWAEPG 256 Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI 336 R L A+ L+ +V ++ I D A D + + + I Sbjct: 257 RALSAEYSSLIVRV---ERRRGTDLYINDGAYGALFDAAHLDWRFPVKLLRAESNQARDI 313 Query: 337 HADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 + GP C+ D++A + + GD + I GAYG +N ++ + Sbjct: 314 NFSFYGPTCDDMDYMAGPFPLPADVKVGDYIEIGMLGAYGNAMRTEFNGFTPSMTVIADD 373 >gi|255323023|ref|ZP_05364159.1| carboxynorspermidine decarboxylase [Campylobacter showae RM3277] gi|255299885|gb|EET79166.1| carboxynorspermidine decarboxylase [Campylobacter showae RM3277] Length = 379 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 50/392 (12%), Positives = 101/392 (25%), Gaps = 31/392 (7%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 ++ ++ P Y + N D V ALK + V+ + G Sbjct: 2 NEILSKIKMPAYVCEEAKVRANLEILKRVKDESGAKVLVALKGFAFSGVMGLVGEYLDGA 61 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 E + A E +S K D ++ S FN ++ A Sbjct: 62 TCSGLHEAKFAQKHVR-GEIHTYSPAFKDEDIDEVLALSKHVVFNSFAQWAKFKQKALAA 120 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + ++ + + + Sbjct: 121 GVTCGLRVNPELSVAPTDAYNPCGRYSRLGITRANFDADALDGITGLHFHALCE------ 174 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 ES +L ++ ++ ++ GGG + + Sbjct: 175 ---------ESAQSLETVLMAFEEKFGEFIPRMKWVNFGGGHHVTKEGYDVDL----LIN 221 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 LI + ++ +EPG + G L V+ + + + Sbjct: 222 LIKNFREKYGVEVYIEPGEAVGWQTGFLAASVLDFV----QNEKTIAILDVSAEAHMPDT 277 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN------RKIALPRPGDLLYIEKTG 372 V G C GD + L+ + A GD + E Sbjct: 278 VLMPYRPAVRGESKGGKFSYRFGGNTCLAGDIVGLDAGEPEYKFDAPLSVGDKVIFEDQI 337 Query: 373 AYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRP 403 Y V++ T+N L +++ + +R Sbjct: 338 HYTIVKNTTFNGIKLPDLLLLKENGELVTVRE 369 >gi|163747196|ref|ZP_02154551.1| Putative Ornithine decarboxylase [Oceanibulbus indolifex HEL-45] gi|161379471|gb|EDQ03885.1| Putative Ornithine decarboxylase [Oceanibulbus indolifex HEL-45] Length = 386 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 65/379 (17%), Positives = 124/379 (32%), Gaps = 32/379 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P + + ++ F FDG +V YA+KAN V+ L G D+ S E+ Sbjct: 23 PVLFLAPSVLQATARRFQADFDG---LVTYAVKANDRPEVLSNLVAAGITSFDVASPAEM 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A P + ++ ++ E+ + +G+Y ++++ SEL L + Sbjct: 80 AAVR-AVCPQAVLHYNNPVRSTAEVKAGIVAGVYSWSIDDMSELAKL----------HDV 128 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + K + KFG Q +L + Q Sbjct: 129 PRDNEVAVRFALPVKGAAYDFGSKFGAAPAQAAALLRAVVEMGFTPSLCFHPGTQCNDPQ 188 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + + LR +I+ +++GGG + D + A Sbjct: 189 AW-----VQYVHAAADILRMADVSIKRMNIGGGFAVDRGFDAPDHRAVFAAVKAALAESF 243 Query: 267 --LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND-FMRPTLYDAYHEI 323 ++ EPGR +VAD +L T++ ++ F+ + +R ++ Sbjct: 244 GAEAPTLLCEPGRAMVADAAVLATRIKGMRNEGRTVFLNDGIYGGLPDLRDMGLSGLVDV 303 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTY 382 + GP C++ D + + + GD L GAY S + Sbjct: 304 VGPDGALRQGAPKPRVVFGPTCDSLDRLPDGLPLPEDAQTGDYLLFGGMGAYSIAMSTAF 363 Query: 383 NSRLLIPEIMVNGSQFHII 401 N L + ++ Sbjct: 364 NGYGL--------GRVELV 374 >gi|218263200|ref|ZP_03477398.1| hypothetical protein PRABACTJOHN_03081 [Parabacteroides johnsonii DSM 18315] gi|218222876|gb|EEC95526.1| hypothetical protein PRABACTJOHN_03081 [Parabacteroides johnsonii DSM 18315] Length = 147 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 3/137 (2%) Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + +A ++ EPGR +VA G L++KV+ +K K F ILD + Sbjct: 6 FDNYFAVFNKLLQLRPGQQVHFEPGRSIVAQCGSLISKVLYVKVGETKKFCILDAGFTEL 65 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 +RP +YDAYH + N D D+VGPICE+ D + ++ GDL+ + Sbjct: 66 IRPAMYDAYHRME---NITSDEEVEVYDVVGPICESSDVFGKDVELNRAHRGDLIALRSA 122 Query: 372 GAYGAVQSGTYNSRLLI 388 GAYG V + YN R L Sbjct: 123 GAYGEVMASQYNCRKLP 139 >gi|241761768|ref|ZP_04759854.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373682|gb|EER63242.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 393 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 122/360 (33%), Gaps = 19/360 (5%) Query: 39 KNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAE 97 + F F G YA+KAN + A+I++L G D+ S E+R A Sbjct: 30 RAARFFIEKFAG---KTMYAVKANPSPALIRSLWDAGITQYDVASANEVRLVRHLLPEAT 86 Query: 98 RIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL-NQRAVSLGKKAPIAFRVNPDINA 156 + V + + G+ F+++++ EL + + + RV+ D + Sbjct: 87 LCFMNPVKAEEVIREAYFEHGVRAFSLDNQDELDKILRATDYAKDLTLCVRLRVSSDHS- 145 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL 216 KFGI Q SL A G+ H+GSQ +++ +A L Sbjct: 146 -------KLSLASKFGIDPAQSASLLMAARQAS--DSLGICFHVGSQAMSPQAYIQAMAL 196 Query: 217 LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPG 276 RD Q I + + + ++ EPG Sbjct: 197 ARDAIVQAGVTVDVIDVGGGFPSIYPDLEPQNLENYFHSIHEAFESLPISYSAELWAEPG 256 Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI 336 R L A+ L+ +V ++ I D A D + + + I Sbjct: 257 RALSAEYSSLIVRV---ERRRGTDLYINDGAYGALFDAAHLDWRFPVKLLRAESNQARDI 313 Query: 337 HADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 + GP C+ D++A + + GD + I GAYG +N ++ + Sbjct: 314 NFSFYGPTCDDMDYMAGPFPLPADVKVGDYIEIGMLGAYGNAMRTEFNGFTPSMTVIADD 373 >gi|85706322|ref|ZP_01037416.1| Putative Ornithine decarboxylase [Roseovarius sp. 217] gi|85669095|gb|EAQ23962.1| Putative Ornithine decarboxylase [Roseovarius sp. 217] Length = 376 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 67/375 (17%), Positives = 124/375 (33%), Gaps = 25/375 (6%) Query: 26 QTP---FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 QTP +S ++ F + F G +V YA+KAN V+ L G D+ Sbjct: 17 QTPDAALLYFSPDQLQATARAFQSGFPG---LVTYAVKANPGAEVLANLVAAGITAFDVA 73 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E+R A + ++ ++I EI++A Q G+ ++++ E L++ + Sbjct: 74 SPEEMRAVRDVCPDA-VLHYNNPVRSIPEIEVASQMGVRSYSIDCLRE---LDKLTGRIA 129 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 A I R+ + + FG A + + M Sbjct: 130 PDAEITVRLALPVRGAAYD----------FGAKFGVGPERAADLLRVVAERGFTPSMTFH 179 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS--SSDYASL 259 + + G + ++VGGG + + Sbjct: 180 PGTQCADPAAWGAYISVVAEVAHA-AGVRLARLNVGGGFASHRTGTTPDLTAVFDHIGAE 238 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + + FG ++ EPGR +VA+ + +V +++ S +R Sbjct: 239 VARVFGPNAPALVCEPGRAMVAEAFSMAVRVKALRDSGAIFVNDGVYGGLTEIRDIGAPD 298 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQ 378 + + + GP C++ D + + GD L I GAY Sbjct: 299 RLTVLAPDGTPRTGAPLPRVVFGPTCDSIDRLPDPLPLPSDLAEGDYLLIAGMGAYTRCL 358 Query: 379 SGTYNSRLLIPEIMV 393 S +N L + V Sbjct: 359 STDFNGYGLREIVTV 373 >gi|83310200|ref|YP_420464.1| diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1] gi|82945041|dbj|BAE49905.1| Diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1] Length = 400 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 77/363 (21%), Positives = 123/363 (33%), Gaps = 23/363 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGEL 86 P C + F ++F G V YA+K N ++AV++ LA G G D S E+ Sbjct: 35 PMLCLRPAKASREAARFVDSFPG---QVLYAVKCNPDEAVLRALAAGGIGHFDAASIAEV 91 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R A V + G+ F ++ EL + I Sbjct: 92 RLVRRLFPEAGIHFMHPVKARSAIREAYGLHGVRDFVLDGAGELDKIVAETEGASDLRLI 151 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + K + KFG L + + G+ H+GSQ Sbjct: 152 -------VRLGLAKGDARLDLSGKFGASADDAVRLLRRCAAVGR---VGLSFHVGSQCCD 201 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ +A L +R+ + +DVGGG +AY PP ++ A++ Sbjct: 202 PSAWERA---LAQADAVIRAAAIQLDVLDVGGGFPVAYPGMRPPPLAAFMAAIRRGVARM 258 Query: 267 ---LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 C + EPGR LVA LV +V + + + ++D Y Sbjct: 259 GLPSGCVLWCEPGRALVAGCQSLVVQVQARRGDMLFINDGVYGTLSDAGALAW--RYPCR 316 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTY 382 A GP C++ D + + GD + I + GAYGA + Sbjct: 317 LIKAAGASHETLQAFGFFGPTCDSLDRMPGPFLLPADTAEGDWIEIGQLGAYGACLRTGF 376 Query: 383 NSR 385 N Sbjct: 377 NGF 379 >gi|302346428|ref|YP_003814726.1| carboxynorspermidine decarboxylase [Prevotella melaninogenica ATCC 25845] gi|302150386|gb|ADK96647.1| carboxynorspermidine decarboxylase [Prevotella melaninogenica ATCC 25845] Length = 388 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 114/386 (29%), Gaps = 21/386 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + +N ++ D + A KA + S E R Sbjct: 14 PMYVLEEARLRENLNLIAHVAKEADVEIILAFKAYALWRTFPIFREYIKATTASSLFEAR 73 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 FS + D+A S FN ++ E + RA +K Sbjct: 74 LGFEEFGAP-THTFSPGYTDYEIDDIARCSSHLVFNSLTQYE--RFHVRAKIENEKLSFG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNP+ + + +FGI ++ I G + Sbjct: 131 LRVNPEYSEVETLIYNPCAPGTRFGISSDKLPETL-------PEDIDGFHI----HCHCE 179 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + ++ ++ I+ GGG + +Y Sbjct: 180 SGSDVFERTLVHIEEKFAKWFPQLKWINFGGGHLMTRKDYDVKRLIHVLRGFRKRYPWL- 238 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 K+ILEPG G LV +V+ I + IL+ + M L YH Sbjct: 239 --KVILEPGSAFAWQTGPLVVQVVDIVEDHGIKTAILNASFTCHMPDCLEMPYHPTIRNA 296 Query: 328 NPAGD----RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + + C +GD++ G+ + E Y V++ +N Sbjct: 297 KLVDEDGSAKGEYTYRLGANSCLSGDWMGSWDFGHTLEVGENIIFEDMLHYTTVKTNMFN 356 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 +++ + T+++ Sbjct: 357 GISHPAIALLHTDNELEMLREYTYED 382 >gi|91762667|ref|ZP_01264632.1| Lysine/ornithine decarboxylase [Candidatus Pelagibacter ubique HTCC1002] gi|91718469|gb|EAS85119.1| Lysine/ornithine decarboxylase [Candidatus Pelagibacter ubique HTCC1002] Length = 392 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 70/363 (19%), Positives = 133/363 (36%), Gaps = 22/363 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P YC +I+ F N F G V YA+K NS+ V+KT+ G D+ S E+ Sbjct: 19 PIYCIRKKSIQSASTYFRNKFPG---KVLYAVKTNSHPEVLKTIVESGIENFDVASIQEI 75 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + A A+ V + I F+++++ EL + + + + + Sbjct: 76 KDIRAISPDAKCSYMHTVKSRESIKEAYFNYNIKAFSLDTKDELIKIIE---ATNQAKDL 132 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 V ++ + + K + YA K G+ H+GSQ Sbjct: 133 ELFVRVAVSNEHAEIDLSKKFGVLTSEATGLLRLTKQYA------KKIGLSFHVGSQCMH 186 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH---QY 263 S+ K + ++ ++ + +I++GGG Y + P + + + Sbjct: 187 PISYAKGTGEIGNIIKKTK---IIPDYINIGGGFPAIYPNLVPQPLENYFEEIKKSLTNL 243 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +++ EPGR +VA+ G + +V KK + D P + Y Sbjct: 244 ELEKLPELLCEPGRAIVAESGSTIVRVNLRKKQKLYINDGTYGTLFDAGTPNM--VYPSR 301 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTY 382 + + D GP C++ D++ + + D + + + GAYG + Sbjct: 302 LIKSSKIISKKLTAFDFYGPTCDSMDYMKGPFLLPNNIKENDYIELGQLGAYGLTFRTQF 361 Query: 383 NSR 385 N Sbjct: 362 NGF 364 >gi|311900080|dbj|BAJ32488.1| putative decarboxylase [Kitasatospora setae KM-6054] Length = 399 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 83/381 (21%), Positives = 137/381 (35%), Gaps = 33/381 (8%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 Y I + Y T + G V +A+KA V+ LA LG+G D S E+ +AL Sbjct: 28 YDLAGIARRYRTLRDELPG--VAVRFAMKACPVDEVLAELAALGAGFDAASPNEIVQALR 85 Query: 92 APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVN 151 P ER+ + K+ I A + GI F +S +++ + + A +A Sbjct: 86 TGTPPERVHYGNTVKSDRGIAEAHRLGIRDFATDSLADVAAIAEHAPGARVFCRLA---- 141 Query: 152 PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFH 211 T + + K+G + A A G+ +H+GSQ E++ Sbjct: 142 ------TSGEGALWGLSRKYGCSAADAVRVMAAARDAGLA-PGGLSVHVGSQQLTAEAWA 194 Query: 212 KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY----------HSDHRPPSSSDYASLIH 261 AF LL D +L +G + H+++GGGL + Sbjct: 195 AAFDLLADAMVELERDGIRLDHVNLGGGLPALGYADRYGTALAPPLDDIFRTVRQGLDRL 254 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVI--SIKKSADKTFVILDVAMNDFMRPTLYDA 319 + + +LEPGR LVAD G + T V + ++ D Sbjct: 255 RRLHGGDLRFVLEPGRHLVADQGAIRTHVYRLTDRQQPDGEREHWLYLGCGKFNGLYEMD 314 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFI-----ALNRKIAL-PRPGDLLYIEKTGA 373 + + D + A I GP C++ D + GD ++I +GA Sbjct: 315 QVQYRLVFPTHPDEDRVPAVIAGPTCDSDDTFPHGGATGRVPVPRAVASGDPVWILSSGA 374 Query: 374 YGAVQSGT-YNSR-LLIPEIM 392 Y +N L ++ Sbjct: 375 YAVSYLTQGFNGFDPLPYTVL 395 >gi|71082910|ref|YP_265629.1| lysine/ornithine decarboxylase [Candidatus Pelagibacter ubique HTCC1062] gi|71062023|gb|AAZ21026.1| Lysine/ornithine decarboxylase [Candidatus Pelagibacter ubique HTCC1062] Length = 392 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 70/363 (19%), Positives = 133/363 (36%), Gaps = 22/363 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P YC +I+ F N F G V YA+K NS+ V+KT+ G D+ S E+ Sbjct: 19 PIYCIRKKSIQSASTYFRNKFPG---KVLYAVKTNSHPEVLKTIVESGIENFDVASIQEI 75 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + A A+ V + I F+++++ EL + + + + + Sbjct: 76 KDIRAISPDAKCSYMHTVKSRESIKEAYFNYNIKAFSLDTKDELIKIIE---ATNQAKDL 132 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 V ++ + + K + YA K G+ H+GSQ Sbjct: 133 ELFVRVAVSNEHAEIDLSKKFGVLTSEATGLLRLTKQYA------KKIGLSFHVGSQCMH 186 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH---QY 263 S+ K + ++ ++ + +I++GGG Y + P + + + Sbjct: 187 PISYAKGIGEIGNIIKKTK---IIPDYINIGGGFPAIYPNLVPQPLENYFEEIKKSLTNL 243 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +++ EPGR +VA+ G + +V KK + D P + Y Sbjct: 244 ELEKLPELLCEPGRAIVAESGSTIVRVNLRKKQKLYINDGTYGTLFDAGTPNM--VYPSR 301 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTY 382 + + D GP C++ D++ + + D + + + GAYG + Sbjct: 302 LIKSSKIISKKLTAFDFYGPTCDSMDYMKGPFLLPNNIKENDYIELGQLGAYGLTFRTQF 361 Query: 383 NSR 385 N Sbjct: 362 NGF 364 >gi|93006328|ref|YP_580765.1| Orn/DAP/Arg decarboxylase 2 [Psychrobacter cryohalolentis K5] gi|92394006|gb|ABE75281.1| Orn/DAP/Arg decarboxylase 2 [Psychrobacter cryohalolentis K5] Length = 414 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 54/405 (13%), Positives = 104/405 (25%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP+Y AI N + + ALK + V + G S E Sbjct: 16 PTPYYLLDEAAIVANMQIIARLCELSGAKALLALKCFATWGVFDIMQPYLHGTTSSSLNE 75 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R + + E L ++ + + Sbjct: 76 VRLGYETFGKNSNASS-------KDKKETHAYSVAYSADEMPEVLSYADKIIFNSISQLN 128 Query: 146 IAFR--VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + +I T P L + +S + + Sbjct: 129 VFKDQAAAQNIPVGLRLNPKTSNSSFIIADPARPFSRLGEHDKDKIAAVLSDISGVMIHN 188 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + +SF + L D+ + ++ + +GGG+ H A + + Sbjct: 189 NCENDSFEAFSESLADIETRFGDVLQQLEWVSLGGGI----HFIAPNYPLEKLADRLKGF 244 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD----- 318 ++ LEPG + G LVT V+ + V+ + +Y Sbjct: 245 SEKYGVQVYLEPGEASIHGAGTLVTSVLDTMHNEKNLAVVDSSIEAHMLDLLIYRESAPI 304 Query: 319 -------------AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDL 365 N + + I G C GD + GD Sbjct: 305 TAVNSDLINIASLDIDPTNIAPISENAKSADNTIIYGRSCLAGDIFGEYALPNKLKVGDT 364 Query: 366 LYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 + Y V+ +N + ++ I+ +Q+ Sbjct: 365 VTFGNAAGYTMVKKNWFNGVNMPAIVIRRLDGSID-IQREFDYQD 408 >gi|56551916|ref|YP_162755.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis ZM4] gi|56543490|gb|AAV89644.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis ZM4] Length = 393 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 123/360 (34%), Gaps = 19/360 (5%) Query: 39 KNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAE 97 + F F G YA+KAN + A+I++L G D+ S E+R A Sbjct: 30 RAARFFIEKFAG---KTMYAVKANPSPALIRSLWDAGITQYDVASANEVRLVRHLLPEAT 86 Query: 98 RIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL-NQRAVSLGKKAPIAFRVNPDINA 156 + V + + G+ F+++++ EL + + + RV+ D + Sbjct: 87 LCFMNPVKAEEVIREAYFEHGVRAFSLDNQDELDKILRATDYAKDLTLCVRLRVSSDHS- 145 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL 216 KFGI Q SL A G+ H+GSQ +++ +A L Sbjct: 146 -------KLSLASKFGIDPAQSASLLMAARQAS--DSLGICFHVGSQAMSPQAYIQAMAL 196 Query: 217 LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPG 276 RD Q I + + + ++ EPG Sbjct: 197 ARDAIVQAGVTVDVIDVGGGFPSIYPDLEPQNLENYFHSIHEAFESLPISYSAELWAEPG 256 Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI 336 R L A+ L+ +V ++ I D A D + + + I Sbjct: 257 RALSAEYSSLIVRV---ERRRGTDLYINDGAYGALFDAAHLDWRFPVKLLRAESNQARDI 313 Query: 337 HADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 + GP C+ D++A + + GD + I GAYG +N + ++ + Sbjct: 314 NFSFYGPTCDDMDYMAGPFPLPADVKVGDYIEIGMLGAYGNAMRTEFNGFMPSMTVIADD 373 >gi|317176826|dbj|BAJ54615.1| carboxynorspermidine decarboxylase [Helicobacter pylori F16] Length = 405 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 67/405 (16%), Positives = 124/405 (30%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLDGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L +++ + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 I R+NP + T + K + GI + Sbjct: 128 LENLGLSPIKIGLRINPLYSEVTPVIYNPCSKVSRLGITPSEFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I + Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRNDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +Y +++LEPG + G L+ VI I D+ ILD + + M Sbjct: 241 IKDFKERYHNI---EVVLEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y V+ D + + + GP C GDF+ A + GD Sbjct: 297 LEMPYRPSILKVSVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDAPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I++ ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFKILKS-FSYED 400 >gi|294011712|ref|YP_003545172.1| ornithine decarboxylase [Sphingobium japonicum UT26S] gi|292675042|dbj|BAI96560.1| ornithine decarboxylase [Sphingobium japonicum UT26S] Length = 397 Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 110/369 (29%), Gaps = 22/369 (5%) Query: 49 DGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAER-IVFSGVGK 106 + YA+KAN + +I+TL G D+ S E+R + V Sbjct: 37 EKFPGRSLYAVKANPSPDLIRTLFACGVTHFDVASIAEVRLVAETLGNEAKLCFMHPVKA 96 Query: 107 TIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK 166 + G+ F+++S E L + + + V +++ + K Sbjct: 97 EEAIAEAYHIHGVRTFSLDSMDE---LAKIMRATNDATDLELCVRLRVSSEHSELSLASK 153 Query: 167 KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 + G + + A L G+ H+GSQ +++ A + +R Sbjct: 154 FGAELGETRELLMATRQAADAL------GICFHVGSQAMSPQAYSDAIERVRAAIVDAAV 207 Query: 227 NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 I + + ++ EPGR L A+ Sbjct: 208 TVDIIDVGGGFPSIYPGMEPVALENYFDAIHRGFESLPISYSAELWCEPGRALSAEYS-- 265 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + V+ +++ I D A + + + GP C+ Sbjct: 266 -SVVVRVERRRGTELYINDGAYGALFDAAHIGWRFPVALLREEESEAELTGFSFYGPTCD 324 Query: 347 TGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-------QF 398 D + + + GD + I GAYGA +N + V Sbjct: 325 DMDHMVGPFMLPDDVQAGDYIEIGMLGAYGAAMRTGFNGFTSEAVVEVEDEPMASLYVDA 384 Query: 399 HIIRPRMTF 407 +R R T Sbjct: 385 VPVRRRATV 393 >gi|169840718|ref|ZP_02873831.1| diaminopimelate decarboxylase [candidate division TM7 single-cell isolate TM7a] Length = 152 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 2/150 (1%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTL 71 V +LA +TP Y IE AF T + YA KA +IK + Sbjct: 1 GGVDTIELAKEFKTPLYVMDQELIETTIDKMKEAFQSTRFKTRIAYAGKAFLTTGMIKLV 60 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G LD+VS GEL A A P +R+ G K ++EI++A++ GI V++E E+ Sbjct: 61 ESKGLDLDVVSGGELYTAHKAGFPMKRVHLHGNNKLVNEIEMAVEYGIDTIVVDNEDEIA 120 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKK 161 + + GKK + R++P I A+TH Sbjct: 121 KIEKVCKEKGKKQAVLVRIDPGIEAHTHHY 150 >gi|300776464|ref|ZP_07086322.1| arginine decarboxylase [Chryseobacterium gleum ATCC 35910] gi|300501974|gb|EFK33114.1| arginine decarboxylase [Chryseobacterium gleum ATCC 35910] Length = 464 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 60/444 (13%), Positives = 130/444 (29%), Gaps = 35/444 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLT----FSNAFDGM----DTM 54 F E +L ++ L + TP I +N F AF+ + Sbjct: 19 EFNVSENNLLFHDIPLMDVVEQFGTPLKISYLPRISQNIQKAKGWFKEAFEKTEYKKNYT 78 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 CY K++ V++ ++ S ++ + + V + D Sbjct: 79 YCYCTKSSHFNFVLEEALKNDISIETSSAYDMDIVKSLYEKGKVDKNIEVICNGFKTDDY 138 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFGI 173 L N E+ L+ I + I A+ + Sbjct: 139 LAKISDMINSGFENITPILDNYRELDKLTESIDSTFDIGIRIASEEEPKFEFYTSRLGIG 198 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 I + P ++ + I + I + + +L+ + Sbjct: 199 YKDIIPYYSQKIAEHPNARLKMLHFFINTGIKDTAYYWNELYKCLRVYARLKKIAPEVDS 258 Query: 234 IDVGGGLGIA---YHSDHRPPSSSDYASLIHQYFGN---LQCKIILEPGRFLVADVGILV 287 +++GGG I + S I ++ + I E G F V + G + Sbjct: 259 LNIGGGFPIKTSLNFDYDYQYMVEEIVSQIKKFCEEEGVEEPNIYTEFGSFTVGESGANL 318 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 K+IS K+ D+ + + P + + + + + G C++ Sbjct: 319 YKIISQKRQNDREKWNMIDSSFMTTLPDTWAISRHFIMLPLNRWEDTYERVFLGGLTCDS 378 Query: 348 GDFI-----ALNRKIALPRPGD----LLYIEKTGAYGAVQSG----TYNSRLLIPEIMVN 394 D+ + + D + TGAY G + +++ Sbjct: 379 DDYYNSEQHTNAIYLPVFS--DTKPLYIGFFHTGAYQETIGGYGGVHHCLMPQPRHVLIQ 436 Query: 395 GSQ-----FHIIRPRMTFQELIEL 413 + + I R + +++++L Sbjct: 437 KDENGELQYEIFREKQEPEDVLKL 460 >gi|284040362|ref|YP_003390292.1| Orn/DAP/Arg decarboxylase 2 [Spirosoma linguale DSM 74] gi|283819655|gb|ADB41493.1| Orn/DAP/Arg decarboxylase 2 [Spirosoma linguale DSM 74] Length = 494 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 57/426 (13%), Positives = 120/426 (28%), Gaps = 34/426 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM---- 54 F L NV L + TP I ++ F NA + Sbjct: 18 EFNVENNELMFNNVPLMDIVKQYGTPLKLTYLPKITEHIDHAKLLFKNAMKRYNYKGNYT 77 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 CY K++ + V+ + L+ S +++ + + + + L Sbjct: 78 YCYCTKSSHFRFVLDEVLKNNVHLETSSAYDIQIIRELYKAEKVSKSTYIICNGYKRPLY 137 Query: 115 LQS-----GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 Q N + + + + F + + + T + Sbjct: 138 TQYISELLNEGFTNCIPVLDNLKEIEAYENSVTAETVNFGIRIATDEEPNFAFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 ++ + K+ + I + I + +LR Sbjct: 198 RYSDV---NELYRSKIQPNEKFKLKMLHFFINTGIKDSAYYWSELSRFMYKYCELRKMCP 254 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADV 283 ++ +D+GGG+ I + ++ I E G + V + Sbjct: 255 DLDSVDIGGGMPIQTSFQFTYDYQAMIDQIVESIQWICNKNNVPVPHIFTEFGSYTVGES 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G ++ KVI K DK + P + + + + + ++ G Sbjct: 315 GAVIYKVIDQKLQNDKELWYMIDGSFITQLPDSWGLGQKYIMLSVNNWENPYQKVNLGGL 374 Query: 344 ICETGDFI---ALNRKIALP-----RPGDLLYIEKTGAYGAVQSG----TYNSRLLIPEI 391 C++ DF A + + LP + + TGAY G + + Sbjct: 375 TCDSHDFYNTEAHSADLYLPIFDQDTEDQYIGLFHTGAYQESLGGYGGIQHCLIPAPQHV 434 Query: 392 MVNGSQ 397 +V+ Sbjct: 435 IVDKDD 440 >gi|298373176|ref|ZP_06983166.1| arginine decarboxylase, biosynthetic [Bacteroidetes oral taxon 274 str. F0058] gi|298276080|gb|EFI17631.1| arginine decarboxylase, biosynthetic [Bacteroidetes oral taxon 274 str. F0058] Length = 463 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 52/445 (11%), Positives = 128/445 (28%), Gaps = 37/445 (8%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--------GMDT 53 F +G L+ + L + TP I +N AF+ D Sbjct: 18 DEFTVEDGDLNWFGIPLMDVIKQYGTPLRIAYLPKIGQNIQRARRAFNVAMAKVDYQGDY 77 Query: 54 MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVP----AERIVFSGVGKTID 109 CY K++ V++ + ++ S ++ + + K Sbjct: 78 NYCYCTKSSHFSFVMEEVLKHNVHIETSSAFDMNILENLYENGFLKPDTYILCNGFKRPQ 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 ++ F ++ K + T + Sbjct: 138 YVENIENLVDLGFKNIIPILDNKFELDLFNITPKRKFNIGIRIAAEEEPKFDFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 ++ I V + + I + I + + +L +L+ Sbjct: 198 RYNDII---PYCEKKIKPNKNVSLKMLHFFINTGIRDTAYYWNELNKVVNLYCELKHIFP 254 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC------KIILEPGRFLVADV 283 ++ +++GGG I H D ++ Q + I E G + V + Sbjct: 255 SLDSLNIGGGFPIQAHLDFDYDYEYMAEEIVAQIKKTCKNNGVEDPHIFTEFGSYTVGES 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G ++ +I+ K+ D+ + + P + ++ D+ + + G Sbjct: 315 GAMLYSIINQKQQNDRELWNMIDSSFMTTLPDTWAINQRYVFLAINNWDKEYERVHMGGL 374 Query: 344 ICETGDFI-----ALNRKIALPRPGD--LLYIEKTGAYGAVQSG----TYNSRLLIPEIM 392 C++ DF + + G+ + GAY G + ++ Sbjct: 375 TCDSEDFYNAEAHSNAIFMPKITNGEEQYVGFFHMGAYQESLGGFGGIQHCLIPGPKLVV 434 Query: 393 VNGSQ-----FHIIRPRMTFQELIE 412 ++ + + +++ +++ Sbjct: 435 IDRDETGEWYTKLFAKEQSYKSMLK 459 >gi|295115564|emb|CBL36411.1| Diaminopimelate decarboxylase [butyrate-producing bacterium SM4/1] Length = 99 Score = 107 bits (266), Expect = 5e-21, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 1/84 (1%) Query: 330 AGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIP 389 + DI G +CE D A++R + GDLL I TGA+G YN +L Sbjct: 4 EKEPCDHKYDITGSLCENNDKFAIDRMLPKIDLGDLLVIHDTGAHGFSMGYNYNGKLRSA 63 Query: 390 EIMV-NGSQFHIIRPRMTFQELIE 412 E+++ +IR T ++ Sbjct: 64 ELLLREDGSIQMIRRAETPRDYYA 87 >gi|254393674|ref|ZP_05008800.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|197707287|gb|EDY53099.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 454 Score = 107 bits (266), Expect = 5e-21, Method: Composition-based stats. Identities = 75/343 (21%), Positives = 125/343 (36%), Gaps = 15/343 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y Y A+ ++ A + YA KAN ++ LA G ++ S GEL Sbjct: 20 PAYLYDLGALREHAAAVRAALPE-RVELYYAAKANPETEILTALAPYVDGYEVASGGELA 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A P + F G GKT +EI AL SG+ F+VES EL L A +A + Sbjct: 79 HVARAV-PGRPLAFGGPGKTPEEIRAALASGVGRFHVESAHELAVLADLAARARVRARVL 137 Query: 148 FRVNPDINANTHKKISTGKKED--KFGIPIHQIHSLYAYAST--LPGVKISGVDMHIGSQ 203 R N + + FGI ++ + P +++ G+ H+ S Sbjct: 138 LRFNLAVPGELLDGSALAMGGRPAPFGIDPADADAVVRTLTEGSSPWLELFGIHAHLASG 197 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 +D A + R +G ++ ++VGGG+ + Y + Y + Sbjct: 198 LDARRQLAVAASVTRWAAALTARHGVPLREVNVGGGMAVDYARPGERFDWAAYGRGLAAL 257 Query: 264 FGNLQCKII-LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ +EPGR L G T V+ +K+S + F ++ + P Sbjct: 258 ADEHPDTVLRIEPGRALTVYCGWYATDVLDVKRSRGEDFAVVRGGTHHLRTPATKGHDQP 317 Query: 323 INYIVNPAGDRL--------HIHADIVGPICETGDFIALNRKI 357 + +VG +C D +A + Sbjct: 318 CAVLPADDWPHPWPRPATGGPGPVTLVGQLCTPKDLLARAVPL 360 >gi|315452641|ref|YP_004072911.1| putative Pyridoxal-dependent decarboxylase, NspC [Helicobacter felis ATCC 49179] gi|315131693|emb|CBY82321.1| putative Pyridoxal-dependent decarboxylase, NspC [Helicobacter felis ATCC 49179] Length = 400 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 50/386 (12%), Positives = 98/386 (25%), Gaps = 7/386 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y ++ N A + ALK + + + G Sbjct: 5 QAIPSPCYVLELAKLQHNLAILERAQREAQVKILLALKGFAFWRSFEWVRSSLYGCCASG 64 Query: 83 EGE--LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E L + + + E L S ++ T + Sbjct: 65 VHEALLAYEEFGSRESGKEICVFSPGYKAEDMAQLLPIATHIIFNSFAQYHTYKDSIQAK 124 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 KK + + S + H + A + + Sbjct: 125 NKKLEKLGLSPLKVGLRINPLFSRVQPMIYNPCAPHSRLGIAPAAFKQGMQQYGLEGISG 184 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 E A + Q+ GG + A Sbjct: 185 LHFHTHCEQDAPALQETLGHVQKHFGFAIENMEWMNFGGGQ-HITKEGYLLEVLSQAVRA 243 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + I LEPG + G L+ V+ I ++ + ++ N Sbjct: 244 FRASYPNIQDIFLEPGEAVGWQSGFLLASVVDIVENEGRVAILDVSITNHMPDCLEMPYR 303 Query: 321 HEINYIVNPAGDRLHIH----ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 E+ ++ + + + G C GD+I GD L + Y Sbjct: 304 PEVLHVDKNGKTQPELERGLAYYLGGASCLAGDYIGPYTFENPLEVGDRLLFQDMLHYSI 363 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIR 402 V++ T+N L ++ F +++ Sbjct: 364 VKNNTFNGVALPSLGLIVNGGFKLLK 389 >gi|47212507|emb|CAF93729.1| unnamed protein product [Tetraodon nigroviridis] Length = 444 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 68/366 (18%), Positives = 131/366 (35%), Gaps = 23/366 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + ++ + + Y+++ NS+ VI LA LG+G ++ EL Sbjct: 40 FFVADLGVVMRQHVRWRTHMAQI--RPYYSVRCNSSPTVIDVLAALGTGFICTNKTELEL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP E I+FSGV K + ++ A ++G+ ++E EL +++ + + Sbjct: 98 VQRRGVPPEDIIFSGVSKQLSQMKYAAKNGVDLLVCDNEVELCKISRCHPNAKYVLIVIL 157 Query: 149 RVNPDINAN--THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + T FG + L A L V++ GV HI + Sbjct: 158 TLVLMLLLQVATEAISPDNGMAMTFGCSLKDCRHLLERAKELG-VQVVGVRFHIPGSCED 216 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + + A R + G +++ +D+GGG +++ + + + + Sbjct: 217 SQVYVHAVSDARCVFDMGEEIGFSMKILDIGGGFNGCET-QLELVNNAVVSMVDLYFPPS 275 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKK-----------------SADKTFVILDVAMN 309 II EPG F V+ L VIS + + + + Sbjct: 276 SGVCIIAEPGSFFVSSAFTLAVNVISKEMVARDSLDQAHDEPSPNDEPAFQYYMKEGVYG 335 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 F D + N + + + GP + D + + + GD L Sbjct: 336 SFASKLCEDQIFVPSVHKNTCLNAAVFSSSLRGPSGDDMDQVVEHCLLPELDIGDWLIFS 395 Query: 370 KTGAYG 375 + GAY Sbjct: 396 QAGAYS 401 >gi|298711201|emb|CBJ32423.1| conserved unknown protein [Ectocarpus siliculosus] Length = 314 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 109/285 (38%), Gaps = 18/285 (6%) Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R NP + + K + G FGI + + +S + HIGS Sbjct: 25 VGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEV-KEICAGGDLTVSRIHTHIGSGS- 82 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + K + DL +Q + G S + + Sbjct: 83 DPAVWQKVSGMSLDLVRQFPTVTTLNLGGGYKVGRMSGEQSTDLQAIGAPVMGDFEAFAE 142 Query: 266 NLQCKI--ILEPGRFLVADVGILVTKVIS--IKKSADKTFVILDVAMNDFMRPTLYDAYH 321 K+ +EPG FLVA+ G LV S F+ LD M + +RP+LY A H Sbjct: 143 ETGRKLKLEIEPGTFLVANAGSLVCTAQDLVSTGSGGYEFIKLDAGMTELLRPSLYGALH 202 Query: 322 EINY-IVNPAGDRLHIHADIVGPICETGDFIA---------LNRKIALPRPGDLLYIEKT 371 I G +VG CE+GD + R +A GDL+ +E Sbjct: 203 PIVVVPAEGEGGGETAEYVVVGHCCESGDLLTPVSGAASEIERRTLAKAEIGDLVVVEGC 262 Query: 372 GAYGAVQSG-TYNSRLLIPEIMVNG-SQFHIIRPRMTFQELIELD 414 GAY A S YNS +PE++++ + H++R R T +++ E + Sbjct: 263 GAYVAGMSAKNYNSFPEVPEVLLDSAGELHVVRRRQTLEQIFENE 307 >gi|77462538|ref|YP_352042.1| putative ornithine decarboxylase [Rhodobacter sphaeroides 2.4.1] gi|332557423|ref|ZP_08411745.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides WS8N] gi|77386956|gb|ABA78141.1| Putative Ornithine decarboxylase [Rhodobacter sphaeroides 2.4.1] gi|332275135|gb|EGJ20450.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides WS8N] Length = 381 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 128/360 (35%), Gaps = 16/360 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P +S + ++ F + F GM V YA+K+N + VI+ LA G G D+ S E+ Sbjct: 23 PVLFFSPSTLQATARRFIDGFPGM---VTYAVKSNPEEVVIENLAAAGIRGYDVASPHEI 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R A + ++ ++ EI + ++ G+ ++V+S SEL L + + G + + Sbjct: 80 RMIRRIAPDAA-LHYNNPVRSRSEIGVGVEMGVKSWSVDSASELAKLIELVPAEGCEIAV 138 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 F++ A KFG + L + I + H G+Q Sbjct: 139 RFKLAVSGAA--------YNFGAKFGATVELAVELLRRVAEAGF--IPSMTFHPGTQCTD 188 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ + ++ + + + + + FG Sbjct: 189 PAAWETYIRTAAEIARDAGVTIARLNVGGGFPSHRLNGVEPELEAIFHLIDRVTDEAFGA 248 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + ++ EPGR + AD L ++ +++ A + + Sbjct: 249 DRPLLVCEPGRGICADAFTLAARIKAVRDDAHVFLNDGVYGSLTELPMIGVIDRVAVLTP 308 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D I GP C++ D + +A GD L + GAY A + +N Sbjct: 309 EGRRRDGETRDRIIFGPTCDSVDRLPGELPLAADVEEGDFLVFQGMGAYSAATNTRFNGF 368 >gi|57505247|ref|ZP_00371176.1| carboxynorspermidine decarboxylase [Campylobacter upsaliensis RM3195] gi|57016383|gb|EAL53168.1| carboxynorspermidine decarboxylase [Campylobacter upsaliensis RM3195] Length = 382 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 52/397 (13%), Positives = 116/397 (29%), Gaps = 33/397 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN + + T V ALK + +K + G Sbjct: 4 ETIQTPAYILEEDKLRKNCELLAKVSEKSGTKVLLALKGFAFSGAMKIVGEYLHGCACSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + DE + + S + ++A + Sbjct: 64 LWEAK---FAKEFVDKEIHTFSPAFKDEEFDEIAELSHHIIFNSLYQFHHFKEKAKAKSL 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + S + + Sbjct: 121 GLRCNPEYSLAPKELYNPCGRYSRLGILSKDLENTDLSGVSGLHFHALCE---------- 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ + ++ ++ GGG +H + +L + Sbjct: 171 -----ESAEALEAVLKAFEAKFGKWIAGMKWVNFGGG----HHITKKGYDVEKLIALCKK 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G+LV VI I ++ ++ + + E Sbjct: 222 FSDKFGVQVYLEPGEAVGWQTGVLVASVIDIVENEKHIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLH---------IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + + + G C GD + + GD + Sbjct: 282 VLNARILSAREGEQISSLREGEKTYLLAGNTCLAGDVMGEYAFKNALQRGDKIVFLDQIH 341 Query: 374 YGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQE 409 Y V++ T+N +L ++ + +IR ++++ Sbjct: 342 YSIVKNTTFNGVILPNLMLYTKKKKLEMIRK-FSYED 377 >gi|307292864|ref|ZP_07572710.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1] gi|306880930|gb|EFN12146.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1] Length = 397 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 60/369 (16%), Positives = 111/369 (30%), Gaps = 22/369 (5%) Query: 49 DGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAA-PVPAERIVFSGVGK 106 + YA+KAN + +I+TL G D+ S E+R A + V Sbjct: 37 EKFPGRSLYAVKANPSPDLIRTLFASGITHFDVASIAEVRLVAEALEGQGKLCFMHPVKA 96 Query: 107 TIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK 166 + G+ F+++S E L + + + V +++ + K Sbjct: 97 EEAVAEAYHVHGVRTFSLDSMDE---LAKIMRATNDATDLELCVRLRVSSEHSELSLASK 153 Query: 167 KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 + G + + A L G+ H+GSQ +++ A + +R Sbjct: 154 FGAELGETRELLMATRQAADAL------GICFHVGSQAMSPQAYSDAIERVRAAIVDAAV 207 Query: 227 NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 + + + ++ EPGR L A+ Sbjct: 208 TVDIVDVGGGFPSVYPGMEPPALEAYFDAIHRGFESLPVSYSSELWCEPGRALSAEYS-- 265 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + V+ +++ I D A + + + GP C+ Sbjct: 266 -SVVVRVERRRGTELYINDGAYGALFDAAHIGWRFPVALLREEESEAELTGFSFYGPTCD 324 Query: 347 TGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-------QF 398 D + + + GD + I GAYGA +N I V Sbjct: 325 DMDHMVGPFMLPEDVQAGDYIEIGMLGAYGAAMRTGFNGFTSEAIIEVEDEPMASLYVDT 384 Query: 399 HIIRPRMTF 407 +R R T Sbjct: 385 APVRRRATV 393 >gi|327313487|ref|YP_004328924.1| carboxynorspermidine decarboxylase [Prevotella denticola F0289] gi|326946094|gb|AEA21979.1| carboxynorspermidine decarboxylase [Prevotella denticola F0289] Length = 388 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 59/387 (15%), Positives = 121/387 (31%), Gaps = 23/387 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + N ++ + + A KA + S E R Sbjct: 14 PMYVLEEARLRDNLALIAHVANEAGVEIILAFKAYALWRTFPIFREYIKATTASSLYEAR 73 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 FS + ++A S FN ++ E + R ++ + Sbjct: 74 LGFEEFGAP-THTFSPGYTDYEIDEIARCSSHLVFNSLTQYE--RYHIRTRLENERLSLG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNP+ + + +FGI ++ I G + Sbjct: 131 LRVNPEYSEVETLIYNPCAPGTRFGISSDRLPDRL-------PDDIDGFHI----HCHCE 179 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + ++ ++ ++ GGG + P +Y Sbjct: 180 SGSDVFERTLAHIEEKFAGWFPQLKWVNFGGGHLMTRKDYDVPRLIRTLRDFKRRYPWL- 238 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 K+ILEPG G LV +V+ + + +L+V+ M L YH Sbjct: 239 --KVILEPGSAFAWQTGPLVAQVVDVVEDHGIKTAVLNVSFTCHMPDCLEMPYHPAVRNA 296 Query: 328 NPAGD----RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 A + + + C +GD++ + G+ + E Y V++ +N Sbjct: 297 CLADEDGSAKGEHTYRLGANSCLSGDWMGSWTFDHALQAGENIIFEDMLHYTTVKTNMFN 356 Query: 384 SRLLIPEIMVN-GSQFHIIRPRMTFQE 409 +++ ++ ++R T+++ Sbjct: 357 GISHPAIALLHPDNELEVLRE-YTYED 382 >gi|108562445|ref|YP_626761.1| carboxynorspermidine decarboxylase [Helicobacter pylori HPAG1] gi|107836218|gb|ABF84087.1| carboxynorspermidine decarboxylase [Helicobacter pylori HPAG1] Length = 405 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 65/405 (16%), Positives = 119/405 (29%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN + ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKILLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L + + + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + R N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITRSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +++LEPG + G L+ VI I D+ ILD + + M Sbjct: 241 I---KDFKERYHNIEVVLEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y + ++ D I + + GP C GDF+ A + GD Sbjct: 297 LEMPYRPSIFKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQGFK-ILKNFSYED 400 >gi|126461472|ref|YP_001042586.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides ATCC 17029] gi|126103136|gb|ABN75814.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides ATCC 17029] Length = 381 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 128/360 (35%), Gaps = 16/360 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P +S + ++ F + F GM V YA+K+N + VI+ LA G G D+ S E+ Sbjct: 23 PVLFFSPSTLQATARRFIDGFPGM---VTYAVKSNPEEVVIENLAAAGVRGYDVASPHEI 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R A + ++ ++ EI + ++ G+ ++V+S SEL L + + G + + Sbjct: 80 RMIRRIAPDAA-LHYNNPVRSRSEIGVGVEMGVKSWSVDSASELAKLIELVPAEGCEIAV 138 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 F++ A KFG + L + I + H G+Q Sbjct: 139 RFKLAVSGAA--------YNFGAKFGATVELAVELLRRVAEAGF--IPSMTFHPGTQCTD 188 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ + ++ + + + + + FG Sbjct: 189 PAAWETYIRTAAEIARDAGVTIARLNVGGGFPSHRLNGVEPELEAIFHLIDRVTDEAFGA 248 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + ++ EPGR + AD L ++ +++ A + + Sbjct: 249 DRPLLVCEPGRGICADAFTLAARIKAVRDDAHVFLNDGVYGSLTELPMIGVIDRVAVLTP 308 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D I GP C++ D + +A GD L + GAY A + +N Sbjct: 309 EGRRRDGETRDRIIFGPTCDSVDRLPGELPLAADVEEGDFLVFQGMGAYSAATNTRFNGF 368 >gi|325860318|ref|ZP_08173440.1| carboxynorspermidine decarboxylase [Prevotella denticola CRIS 18C-A] gi|325482197|gb|EGC85208.1| carboxynorspermidine decarboxylase [Prevotella denticola CRIS 18C-A] Length = 388 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 121/387 (31%), Gaps = 23/387 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + N ++ + + A KA + S E R Sbjct: 14 PMYVLEEARLRDNLALIAHVANEAGVEIILAFKAYALWRTFPIFREYIKATTASSLYEAR 73 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 FS + ++A S FN ++ E + R ++ + Sbjct: 74 LGFEEFGAP-THTFSPGYTDYEIDEIARCSSHLVFNSLTQYE--RYHIRTRLENERLSLG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNP+ + + +FGI ++ I G + Sbjct: 131 LRVNPEYSEVETLIYNPCAPGTRFGISSDRLPDRL-------PDDIDGFHV----HCHCE 179 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + ++ ++ ++ GGG + P + Sbjct: 180 SGSDVFERTLAHIEEKFAGWFPQLKWVNFGGGHLMTRKDYDVPRLIRTL---RNFKRRYP 236 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 K+ILEPG G LV +V+ + ++ +L+V+ M L YH Sbjct: 237 WLKVILEPGSAFAWQTGPLVAQVVDVVENHGIKTAVLNVSFTCHMPDCLEMPYHPAVRNA 296 Query: 328 NPAGD----RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 A + + + C +GD++ + G+ + E Y V++ +N Sbjct: 297 CLADEDGSAKGEHTYRLGANSCLSGDWMGSWTFDHALQAGENIIFEDMLHYTTVKTNMFN 356 Query: 384 SRLLIPEIMVN-GSQFHIIRPRMTFQE 409 +++ ++ ++R T+++ Sbjct: 357 GISHPAIALLHPDNELEVLRE-YTYED 382 >gi|13471573|ref|NP_103139.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099] gi|14022315|dbj|BAB48925.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099] Length = 406 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 63/384 (16%), Positives = 109/384 (28%), Gaps = 21/384 (5%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 EN LA P YC+ ++ + F F G YA+K N Q V+KTL Sbjct: 4 FENAREAALALRPDDPVYCFRPQVLKADARQFMGMFPG---KTAYAVKTNGEQIVLKTLV 60 Query: 73 HLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G D+ S GE A AE + V D + GI +++ E E+ Sbjct: 61 EAGVTAFDVASPGEFAAVRAVSPDAEMLYMHPVKAQSDIKLALEKYGIRVISLDHEDEIT 120 Query: 132 ---TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 + + + R+ +A + KFG L + Sbjct: 121 KLTRVVRALDIDPGSISVFVRIQTKGSA-------AYELSKKFGAGPAYAVELAERLNRT 173 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 + + A G ++ Sbjct: 174 GYKVGLCFHVGSQIEDPDTYERALASADWVRNRLTFDIAGLDVGGGFPAEYGHDPNRKQI 233 Query: 249 RPPSSSDYASLIH---QYFGNLQCKIILEPGRFLVADVGILVTKV---ISIKKSADKTFV 302 PS S + + + Q ++ EPGR +VA L+ +V + + Sbjct: 234 EMPSLGQIMSRLSGDLKEYQFDQMPLVAEPGRVIVARCLSLIVRVLLRKGKRLYINDGIW 293 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PR 361 + ++ + + G C++ D ++ + Sbjct: 294 ASLSDSWTGKITLPARFIPDPAIRTRNGAEKNVVPFKVCGATCDSVDILSRPFWLPETVD 353 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSR 385 GD + I GAY +N Sbjct: 354 TGDWIEIGHIGAYSLSLRTRFNGF 377 >gi|217031766|ref|ZP_03437270.1| hypothetical protein HPB128_155g79 [Helicobacter pylori B128] gi|298737096|ref|YP_003729626.1| carboxynorspermidine decarboxylase NspC [Helicobacter pylori B8] gi|216946613|gb|EEC25213.1| hypothetical protein HPB128_155g79 [Helicobacter pylori B128] gi|298356290|emb|CBI67162.1| carboxynorspermidine decarboxylase (NspC) [Helicobacter pylori B8] Length = 405 Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 66/405 (16%), Positives = 118/405 (29%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L + + + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + R N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITKSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 ++ILEPG + G L+ VI I D+ ILD + + M Sbjct: 241 I---KDFKERYHNVEVILEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y + ++ D I + + GP C GDF+ + GD Sbjct: 297 LEMPYRPSIFKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFK-ILKNFSYED 400 >gi|302517374|ref|ZP_07269716.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB78] gi|302426269|gb|EFK98084.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB78] Length = 396 Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 85/379 (22%), Positives = 147/379 (38%), Gaps = 30/379 (7%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 Y I Y V +A+KA + V++ LA +G+G+D ELR+AL Sbjct: 19 VYDLDGIRARYAELCRELPS--AAVRFAMKAAPDDGVLRALAAVGAGVDAAGPQELRQAL 76 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A P E + + K+ +I A G+ F +S +L L + A IA Sbjct: 77 RAGFPVESVHYGNTIKSDADIAEAYALGVRLFVTDSREDLAALARHAPGARVFCRIAVEG 136 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 + + KFG + L A+ L V SG+ +H+GSQ +++ Sbjct: 137 GSAL----------WGLKHKFGCAPDEGVRLLREAAGLGLV-PSGLSVHVGSQQMDPDAW 185 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA-----YHSDHRPPSSSDYASLIH---- 261 +A + L + + L G + H+++GGGL PP +A+L Sbjct: 186 REACERLAAVLEALGEAGITLDHVNLGGGLPARGYLSAEGEPLDPPLDKIFATLREGVER 245 Query: 262 -QYFGNLQCKIILEPGRFLVADVGILVTKVI--SIKKSADKTFVILDVAMNDFMRPTLYD 318 + +++EPGR+LVAD G + +V+ + ++ D Sbjct: 246 LRAVHGGHLDVVMEPGRWLVADHGTIHARVVRLTRRRMPDGVLQHWLYLSCGKFNGLYEM 305 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR---KIA-LPRPGDLLYIEKTGAY 374 + + A + GP C++ D A +R ++ R GD + I GAY Sbjct: 306 DALQYRLRFPTRSAAPRVPAVVAGPTCDSDDAFAHDRGHVRVPADLRSGDPVEILSCGAY 365 Query: 375 GAVQSGT-YNSRLLIPEIM 392 + +N +P ++ Sbjct: 366 ALSYTTRGFNGFSPLPVVL 384 >gi|295840543|ref|ZP_06827476.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB74] gi|197696621|gb|EDY43554.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB74] Length = 396 Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 86/379 (22%), Positives = 146/379 (38%), Gaps = 30/379 (7%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 Y + Y V +A+KA V++ LA +G+G+D ELR+AL Sbjct: 19 VYDLDGVRARYAELLRELPS--AAVRFAMKAAPEDGVLRALAAVGAGVDAAGPQELRQAL 76 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A P E+I + K+ +I A G+ F +S +L L + A IA Sbjct: 77 RAGFPVEKIHYGNTIKSDADIAEAYALGVRLFVTDSREDLAALARHAPGARVFCRIAVEG 136 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 + + KFG + L A+ L V SG+ +H+GSQ +++ Sbjct: 137 GSAL----------WGLKHKFGCAPDEGVRLLREAAGLGLV-PSGLSVHVGSQQMDPDAW 185 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA-----YHSDHRPPSSSDYASLIHQYF- 264 A + L + + L + G + H+++GGGL PP +A+L Sbjct: 186 RDACERLAAVLESLGAAGITLDHVNLGGGLPARGYLNADGQPLDPPLDKIFATLREGVER 245 Query: 265 ----GNLQCKIILEPGRFLVADVGILVTKVI--SIKKSADKTFVILDVAMNDFMRPTLYD 318 +++EPGR+LVAD G + +V+ + + D Sbjct: 246 LRSVHGGHLGVVMEPGRWLVADHGTIQARVVRLTRRHMPDGHVQHWLYLSCGKFNGLYEM 305 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR---KIA-LPRPGDLLYIEKTGAY 374 + A + A + GP C++ D A +R ++ R GD + I GAY Sbjct: 306 DALQYRLRFPTASAAPRVPAVVAGPTCDSDDAFAHDRGHVRVPADLRSGDPVEILSCGAY 365 Query: 375 GAVQSGT-YNSRLLIPEIM 392 + +N +P ++ Sbjct: 366 ALSYTTRGFNGFSPLPVVL 384 >gi|288802523|ref|ZP_06407962.1| carboxynorspermidine decarboxylase [Prevotella melaninogenica D18] gi|288335051|gb|EFC73487.1| carboxynorspermidine decarboxylase [Prevotella melaninogenica D18] Length = 388 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 115/386 (29%), Gaps = 21/386 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y T + +N ++ D + A KA + S E R Sbjct: 14 PMYVLEETRLRENLNLIAHVAKEADVEIILAFKAYALWRTFPIFREYIKATTASSLFEAR 73 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 FS + D+A S FN ++ E + RA +K Sbjct: 74 LGFEEFGAP-THTFSPGYTDYEIDDIARCSSHLVFNSLTQYE--RFHVRAKIENEKLSFG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNP+ + + +FGI ++ I G + Sbjct: 131 LRVNPEYSEVETLIYNPCAPGTRFGISSDKLPETL-------PEDIDGFHI----HCHCE 179 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + ++ ++ I+ GGG + +Y Sbjct: 180 SGSDVFERTLVHIEEKFTKWFPQLKWINFGGGHLMTRKDYDVKRLIHVLRGFRKRYPWL- 238 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 K+ILEPG G LV +V+ I + IL+ + M L YH Sbjct: 239 --KVILEPGSAFAWQTGPLVVQVVDIVEDYGIKTAILNASFTCHMPDCLEMPYHPTIRNA 296 Query: 328 NPAGD----RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + + C +GD++ G+ + E Y V++ +N Sbjct: 297 KLVDEDGTAKGEYTYRLGANSCLSGDWMGSWDFGHALEVGENIIFEDMLHYTTVKTNMFN 356 Query: 384 SRLLIPEIMVNGSQFHIIRPRMTFQE 409 +++ + T+++ Sbjct: 357 GISHPAIALLHTDNELEMLREYTYED 382 >gi|83859249|ref|ZP_00952770.1| ornithine decarboxylase, putative [Oceanicaulis alexandrii HTCC2633] gi|83852696|gb|EAP90549.1| ornithine decarboxylase, putative [Oceanicaulis alexandrii HTCC2633] Length = 418 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 74/363 (20%), Positives = 125/363 (34%), Gaps = 22/363 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P C + F N F G V YA+K+N + VI TL G D+ S E+ Sbjct: 19 PVACARPDRLTIAASWFQNNFPG---EVLYAVKSNPSAWVIDTLYAAGMRWFDVASLNEV 75 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + A V G+ F ++ E+EL+ + + Sbjct: 76 ELIASRCPDATMAFMHPVKSRRAINKAYFDYGVRIFVLDCEAELEKILVETGYAKDLTLV 135 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + A T KFG L A GV H+GSQ Sbjct: 136 VRIAVSNDGA-------TLPLAGKFGASEDDAVELIQRARVYA--DELGVSFHVGSQCMA 186 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ A + D+++ ++ + +DVGGG +AY PP S A++ + + Sbjct: 187 PSAYRGA---MLDVSRLIKRAAVTVDIVDVGGGFPVAYPGMTPPPLSEYVAAIENAFEEM 243 Query: 267 L---QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + + EPGR L A+ ++T+V +K + D + Y Sbjct: 244 MVLENADLWCEPGRALCAESTSILTRVELVKGDQVYLNDGAYGTLFDLVHMKW--PYPIR 301 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTY 382 + + GP C+ D ++ ++ GD++ GAYG + + Sbjct: 302 VHRAKGEPSGQTAGFRLYGPTCDAIDAVSAPVELPVDLSEGDVIEFAMLGAYGVAMATRF 361 Query: 383 NSR 385 N Sbjct: 362 NGF 364 >gi|225387838|ref|ZP_03757602.1| hypothetical protein CLOSTASPAR_01608 [Clostridium asparagiforme DSM 15981] gi|225046055|gb|EEG56301.1| hypothetical protein CLOSTASPAR_01608 [Clostridium asparagiforme DSM 15981] Length = 94 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 D+VG +CE D A++R + GDLL I TGA+G YN +L E++ Sbjct: 3 PCDHMYDVVGSLCENNDKFAIDRMLPKVDKGDLLVIHDTGAHGFAMGYNYNGKLKSAELL 62 Query: 393 V-NGSQFHIIRPRMTFQELI 411 + +IR T ++ Sbjct: 63 LKEDGSVQMIRRAETPKDYF 82 >gi|308182206|ref|YP_003926333.1| carboxynorspermidine decarboxylase [Helicobacter pylori PeCan4] gi|308064391|gb|ADO06283.1| carboxynorspermidine decarboxylase [Helicobacter pylori PeCan4] Length = 406 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 68/405 (16%), Positives = 124/405 (30%), Gaps = 32/405 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN + ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKILLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L +++ + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI + Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSEFEKGAKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVEKHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +Y N+ ++ILEPG + G L+ VI I D+ ILD + + M Sbjct: 241 IKDFKERYHNNI--EVILEPGEAIGWQCGFLIASVIDIV-KNDQEIAILDASFSAHMPDC 297 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y V+ D I + + GP C GDF+ A + GD Sbjct: 298 LEMPYRPSILKVSVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGD 357 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 358 KIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQGFK-ILKNFSYED 401 >gi|147900989|ref|NP_001087584.1| antizyme inhibitor 1 [Xenopus laevis] gi|51512991|gb|AAH80385.1| MGC81852 protein [Xenopus laevis] Length = 443 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 121/360 (33%), Gaps = 31/360 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y ++ NS+ AV++ LA LG G ++ E+ Sbjct: 40 FFVADLGKIVKKHFKWKNIMGHIKP--FYTVRCNSSPAVLEILAALGMGFACANKNEMSL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + E +V++ K +I A + G+ ESE+ELK + + Sbjct: 98 VYDLGISMENVVYTNPCKQASQIKHAAKIGVNLMTCESETELKKIVRNH----------L 147 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 ++ T + FG + L A L ++ GV H+ S + + Sbjct: 148 NAKLLLHIATEGISGEEEMNMTFGTTLKNCRHLLDCAKELSV-EVVGVKFHVSSSSNNPQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A R + + G + +D+GG + + S L + Sbjct: 207 TYIHALSDARCVFDMAKELGFKMNILDIGGISENEAQLEEVYQAVSPL--LDVYFPEGSG 264 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA--------- 319 +II EPG F V+ L VI+ + + + N +Y Sbjct: 265 TRIIAEPGSFYVSSAFTLAVNVIAKEATEHDQHLSSAGKPNSNKPAFIYCMKEGVYGSFA 324 Query: 320 -------YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + + ++GP + D I + + GD + + G Sbjct: 325 RKLSEKLNTAPEVHKKYKDNEPLFASSLLGPSYDELDVIVEHCLLPELEVGDWIVFDNMG 384 >gi|89890104|ref|ZP_01201615.1| arginine decarboxylase [Flavobacteria bacterium BBFL7] gi|89518377|gb|EAS21033.1| arginine decarboxylase [Flavobacteria bacterium BBFL7] Length = 463 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 56/445 (12%), Positives = 125/445 (28%), Gaps = 41/445 (9%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 FK + +LH ++ L +L +P + Y I N F++AF D Sbjct: 19 EFKLEDKTLHFHDIDLMELVEKYGSPLKFTY-LPKISDNIQRAQKWFNDAFAKADYKAKY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA----ERIVFSGVGKTID 109 CY K++ + V+ T L+ S ++ + + S K Sbjct: 78 HYCYCTKSSHFKHVLDTALSNDIHLETSSAFDIDIIKKLKAEGKIKDDTYIISNGFKREK 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 ID ++ + + T + Sbjct: 138 YIDNIADLINSGHKNCIPIIDNYEELNLLTNVTDKKFKVGIRIASEEEPKFEFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + + V + + I + I + + L+ Sbjct: 198 GYKNILS---FYKNQIQENQQVSLKMLHFFINTGIRDNAYYWNELHKCLKVYISLKKICP 254 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADV 283 ++ +++GGG I +++Q I E G F V + Sbjct: 255 SLDSLNIGGGFPIKNSLAFEFDYEYMINEIVNQIKQVCDEADVDVPHIFTEFGSFTVGES 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G + KV+ K+ D+ + + P + + + + + G Sbjct: 315 GGAIYKVLYQKQQNDREKWNMINSSFITTLPDSWAISKRFIMLALNRWNEEYERVLLGGL 374 Query: 344 ICETGDFI-----ALNRKIALPRPGD---LLYIEKTGAYGAVQSG----TYNSRLLIPEI 391 C++ D+ + D + TGAY G + I Sbjct: 375 TCDSDDYYNSEQNVNAIYLPKYH-KDKPLYIGFFNTGAYQESIGGYGGIQHCLIPAPKHI 433 Query: 392 MVNGSQ-----FHIIRPRMTFQELI 411 +++ + + + + + ++++ Sbjct: 434 LIDRDENGAIQTRVFKEQQSSEQML 458 >gi|328542930|ref|YP_004303039.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [polymorphum gilvum SL003B-26A1] gi|326412676|gb|ADZ69739.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Polymorphum gilvum SL003B-26A1] Length = 406 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 57/372 (15%), Positives = 105/372 (28%), Gaps = 27/372 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIVSEGEL 86 P YC+ + ++ F+ F G YA+K N V+ TLA G D+ S E Sbjct: 19 PVYCFRPKVLAEDARRFAGLFPG---KTAYAVKTNGEPFVLATLAQAGIDCFDVASPAEF 75 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 AE + V I +++ E E+ + + + Sbjct: 76 AAVRGVAPSAEMLYMHPVKAQSHIRLALETYRIRTLSLDHEDEVAKILR----------V 125 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 ++ D T K + + + + L + G + + Sbjct: 126 VRALDIDPGDITLFVRIATKGQAAYELSKKFGAAPAHAVELLQRIDRIGFRCGLCFHVGS 185 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG---IAYHSDHRPPSSSDYASLIHQY 263 + ++ +RS GG + R P L+ Q Sbjct: 186 QIEDPQTYERALASADWIRSRAGVPIVALDVGGGFPAVYGHDPRRRTPEMPSLEELMAQL 245 Query: 264 ------FGNLQCKIILEPGRFLVADVGILVTKV---ISIKKSADKTFVILDVAMNDFMRP 314 +G ++ EPGR +VA LV +V + + Sbjct: 246 RQDISDWGFDTLPLVAEPGRVIVARSISLVVRVLLKKGRRLYINDGIWASLSDSWTGKIT 305 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGA 373 + + + G C++ D ++ + GD + I GA Sbjct: 306 LPARFIPDPARKRRAGNPDEIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGA 365 Query: 374 YGAVQSGTYNSR 385 Y +N Sbjct: 366 YSLSLRTHFNGF 377 >gi|15644653|ref|NP_206822.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori 26695] gi|2313093|gb|AAD07088.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori 26695] Length = 405 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 67/407 (16%), Positives = 119/407 (29%), Gaps = 33/407 (8%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + TP Y + +EKN V ALK + L +G Sbjct: 6 TIPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGL 65 Query: 84 GE--LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E L + + + + A+ S + T R + Sbjct: 66 YEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKN 125 Query: 142 KK--------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 K+ + R+NP + T + K + GI Sbjct: 126 KQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSGFEKGVKEHGLEGV--- 182 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + ++ + L + + R N+ ++ GGG I Sbjct: 183 ----SGLHFHTHCEQNADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITKSDYDVNLLI 238 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 ++ILEPG + G L+ VI I D+ ILD + + M Sbjct: 239 QTI---KDFKERYHNIEVILEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSAHMP 294 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRP 362 L Y + V+ D I + + GP C GDF+ + Sbjct: 295 DCLEMPYRPSIFKVSVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKR 354 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 GD + + Y V++ ++N L ++ F I ++++ Sbjct: 355 GDKIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFK-ILKNFSYED 400 >gi|312129401|ref|YP_003996741.1| orn/dap/arg decarboxylase 2 [Leadbetterella byssophila DSM 17132] gi|311905947|gb|ADQ16388.1| Orn/DAP/Arg decarboxylase 2 [Leadbetterella byssophila DSM 17132] Length = 490 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 52/440 (11%), Positives = 122/440 (27%), Gaps = 38/440 (8%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYAL 59 + +L NV L + TP I ++ F NA + CY Sbjct: 24 QNNLLFNNVPLMDVIRKYGTPLRISYLPKIGEHIEHSKILFKNAMKKYNYRGNYTYCYCT 83 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEG-----ELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 K++ + ++ T L+ S E ++ +G ++ Sbjct: 84 KSSHFKFILDTALKHNIHLETSSAFDIPLIETLYEEGKITKDTYVICNGHKMPQYLKNIT 143 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 N + + + + + T + ++ Sbjct: 144 NLINQGFVNCTPILDNLDEIDHYLENVTADHVNIGIRIATDEEPTFSFYTSRLGIRYKDV 203 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 K+ + I S I + +++ + I Sbjct: 204 ---DDLYLKKIKPDERFKLKMLHFFINSGIKDTAYYWSELTRFMFKYCEMKRICPELDSI 260 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGILVT 288 D+GGG+ I + + +I I E G + V + G ++ Sbjct: 261 DIGGGMPIQTSVVYNFDYQAMVDEIIENIQWICHKNNVPVPNIFTEFGSYTVGESGAILY 320 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 K+I K+ D+ + P + + + D + ++ G C++ Sbjct: 321 KIIDQKQQNDRELWYMIDGSFITQLPDSWGIGQKYIMLPINNWDAPYTKVNLGGLTCDSA 380 Query: 349 DFI-----ALNRKIALPRP-GD-LLYIEKTGAYGAVQSG----TYNSRLLIPEIMVNGSQ 397 D+ + + + + D + TGAY G + ++++ + Sbjct: 381 DYYNTESHSEDLYMPIIDEKNDQYIGFFHTGAYQESLGGYGGIQHCLIPAPKHVLIDRDE 440 Query: 398 -----FHIIRPRMTFQELIE 412 + T + +++ Sbjct: 441 NGNITTELFADEQTEESMLK 460 >gi|254778756|ref|YP_003056861.1| Carboxynorspermidine decarboxylase [Helicobacter pylori B38] gi|254000667|emb|CAX28576.1| Carboxynorspermidine decarboxylase [Helicobacter pylori B38] Length = 405 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 65/405 (16%), Positives = 118/405 (29%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L + + + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFERGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITKSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 ++ILEPG + G L+ VI I D+ ILD + + M Sbjct: 241 I---KDFKERYHDIEVILEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSTHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y + ++ D I + + GP C GDF+ + GD Sbjct: 297 LEMPYRPSIFKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQGFK-ILKNFSYED 400 >gi|125539468|gb|EAY85863.1| hypothetical protein OsI_07224 [Oryza sativa Indica Group] Length = 427 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 99/357 (27%), Gaps = 5/357 (1%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F + + + + G YA+K N N A++ LA LG+G D S E+ Sbjct: 63 FNVLDLGEVARLFAAWWRGLRG--VRPYYAVKCNPNPALLGALAGLGAGFDCASRAEMEA 120 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V A+R+V++ K ++ A G+ +SE E+ + + I Sbjct: 121 VLALGVAADRVVYANQCKLEPHLEYAAGVGVDLTTFDSEEEVGKIKRCHPGCRLLLRIKA 180 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 D + +P+ A + +G IE Sbjct: 181 PDGDDGGGAMLNLGTKYGAHRDEVVPLLAAARRAGMAVVGVSFHVGSAVSRVGIYAAAIE 240 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + Q + GG + P + Sbjct: 241 AARAGGGGGESTFQGASAVISAALARHFGGDDMPSGVEVIAEPGRYFAETAFALAARIFG 300 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 + E + + D + + V I + Sbjct: 301 KRTRGEVREYWIDDGMFGTLCCVHF---ENYVPRPAPVTATADDGDEQAATMGGEMMITS 357 Query: 329 PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + GP ++ D + ++ GD L + GAY V S +N Sbjct: 358 TNTSTKTHPSTVFGPTLDSFDEVVRGYQLPELCTGDWLVFDDVGAYTTVCSSDFNGF 414 >gi|149915813|ref|ZP_01904338.1| Putative Ornithine decarboxylase [Roseobacter sp. AzwK-3b] gi|149810395|gb|EDM70240.1| Putative Ornithine decarboxylase [Roseobacter sp. AzwK-3b] Length = 401 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 120/361 (33%), Gaps = 20/361 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGELR 87 Y +S A++ F FDGM V YA+KAN + V+ L G D+ S E+ Sbjct: 49 LY-FSPAALQDTARRFQQGFDGM---VTYAVKANPGEEVLANLVAAGIRAFDVASPQEMA 104 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A A + ++ ++ DE+ +A G+ +V+ EL L + +A Sbjct: 105 AVRAVCGDA-VLHYNNPVRSGDEVAVARAYGVASCSVDCPRELDKLESLPRTTEIAVRLA 163 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 V +KFG+ + L + + + H G+Q Sbjct: 164 LPVAGAA----------YDFGEKFGLDPERAAVLLRKVAERGF--VPAITFHPGTQCADP 211 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ + ++ + + D + A + Sbjct: 212 GAWGTYIEAAAEVARAADVQIARLNVGGGFASHRGGDAPDLEAIFAHIRAETDRCFGAQA 271 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 +++ EPGR +VAD L T+V +++ MR + Sbjct: 272 P-RLVCEPGRAMVADALTLATRVKALRACGAVFLNDGIYGGLMEMRDIGAPGRLRVIDPQ 330 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A + + GP C++ D + + GD + + GAY + +N Sbjct: 331 GRARQGAPVPRVVFGPTCDSLDRLPEPLALPGDIAEGDYILFDGMGAYSRSLTTRFNGYG 390 Query: 387 L 387 L Sbjct: 391 L 391 >gi|83646422|ref|YP_434857.1| diaminopimelate decarboxylase [Hahella chejuensis KCTC 2396] gi|83634465|gb|ABC30432.1| Diaminopimelate decarboxylase [Hahella chejuensis KCTC 2396] Length = 461 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 81/393 (20%), Positives = 132/393 (33%), Gaps = 27/393 (6%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAV 67 L + V L+ L +P + E+N F + D V YA+K N + Sbjct: 31 VLDCDPVRLQALMDAHGSPVHLMFPQIFEENLYRFRRVYAAADIRGDVLYAMKVNRCNSF 90 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG-IYCFNVES 126 +K LA G+G D+ S EL+ ALAA V + SG K+ D ++L ++ G + + Sbjct: 91 LKALAVNGAGADVSSLFELQDALAAGVEGDACSLSGAFKSPDFVELGVKKGAVVAIDSAE 150 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E E A G K I R N D+ A+ S + + Q + Sbjct: 151 EFEGLQALLLASHKGGKTRIKLRWNGDVGASRFGMNSETLRTLADTLQPFQDRLELEGVA 210 Query: 187 TL-------PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + V + + I ++ ++ + + S + G Sbjct: 211 LHLGGYSIRQRAEALAVSIEMIRYIRELGFDARSVNIGGGFPTRYLSRSNWEAFQGYNGS 270 Query: 240 LGIAYHSDHRPPSSSD-------------YASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 A + + +EPGR LV G+ Sbjct: 271 HYYTDGHPPSDFYPYWSPRVKEEALEDILAACGNRERLRQESVALYVEPGRALVDQAGMT 330 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +V +K+ VI+ + T + + ++ IV AG A I G C Sbjct: 331 LFRVKGVKRLGPDKHVIVVDGFSFSACETWFHSEFLVDPIVIGAGQGGAGVAYIAGGSCL 390 Query: 347 TGDFIALNRKIA---LPRPGDLLYIEKTGAYGA 376 D + R I LP+ GD L T Y Sbjct: 391 ESDVLTK-RWIPFKNLPQAGDCLAFVNTAGYQM 422 >gi|71065473|ref|YP_264200.1| pyridoxal-dependent decarboxylase [Psychrobacter arcticus 273-4] gi|71038458|gb|AAZ18766.1| probable pyridoxal-dependent decarboxylase [Psychrobacter arcticus 273-4] Length = 417 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 59/403 (14%), Positives = 107/403 (26%), Gaps = 29/403 (7%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP+Y AI N + + ALK + V + G S E Sbjct: 19 PTPYYLLDEAAIVANMQIIARLCELSGAKALLALKCFATWGVFDVMEPYLHGTTSSSLNE 78 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R + S K S V + ++ N + K Sbjct: 79 VRLGYESF--GNNSDASSQDKKETHAYSVAYSADEMPEVLNYADKIIFNSISQLNAFKEQ 136 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 +I T P L + +S + + Sbjct: 137 A---AAKNIPVGLRLNPKTSNSSFIIADPARPFSRLGEHDKDKIAAVLSDISGVMIHNNC 193 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + +SF + L D+ + ++ + +GGG+ H A + + Sbjct: 194 ENDSFEAFSESLADIETRFGDVLQQLEWVSLGGGI----HFIAPDYPLEKLADRLKGFSE 249 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD------- 318 N ++ LEPG + G LVT V+ + V+ + +Y Sbjct: 250 NYGVQVYLEPGEASIHGAGTLVTSVLDTMHNEKNLAVVDSSIEAHMLDLLIYRESAPIAA 309 Query: 319 -----------AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 N + + I G C GD + GD + Sbjct: 310 INSDLINIASLDIDPTNIAPISENAKSADNTIIYGRSCLAGDIFGEYALPNNLKIGDTVT 369 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 Y V+ +N + ++ I+ +Q+ Sbjct: 370 FGNAAGYTMVKKNWFNGVNMPAIVIRRLDGSID-IQREFDYQD 411 >gi|288927594|ref|ZP_06421441.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 317 str. F0108] gi|288330428|gb|EFC69012.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 317 str. F0108] Length = 390 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 61/387 (15%), Positives = 113/387 (29%), Gaps = 24/387 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V+ P Y + +N ++ + + A KA + S Sbjct: 9 EEVRRPMYIVEEAKLRRNLELIASVSARAEVEIILAFKAFALWKTFPIFKEYIRSTTASS 68 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A R T DEI+ S ++ + A Sbjct: 69 LSEAKLAF--EEFGSRAHTYSPAYTDDEIEEIASC-SSHLTFNSLTQYDRYSTFAKERNA 125 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 RVNP+ + + + +FG+ A LP + ++ Sbjct: 126 SLSFGLRVNPEYSEVETELYNPCAPGTRFGLS----------AERLPSQLPTNIEGFHCH 175 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + A + L + + ++ I+ GGG + S + Sbjct: 176 CHCESGADVFA-RTLAHIESKFSGWFPALKWINFGGGHLMTRKDYDVELLVDTLRSFKER 234 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +ILEPG G LV +V+ I + IL+V+ M L Y Sbjct: 235 HPHLH---VILEPGSAFAWQTGPLVAQVVDIVEDKGIQTAILNVSFTCHMPDCLEMPYQP 291 Query: 323 INYIVNP------AGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 + G C +GDF+ + G+ + E Y Sbjct: 292 SVRNAQSLDLEAAVNGGAKHIYRLGGNSCLSGDFMGSWQFDHALTVGENVIFEDMIHYTT 351 Query: 377 VQSGTYNSRLLIPEIMVN-GSQFHIIR 402 V++ +N +V + ++R Sbjct: 352 VKTNMFNGISHPSLAIVRTSGELEMLR 378 >gi|315586009|gb|ADU40390.1| carboxynorspermidine decarboxylase [Helicobacter pylori 35A] Length = 405 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 62/405 (15%), Positives = 118/405 (29%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVCQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L +++ + + + S + T + K+ Sbjct: 68 AKLAFEEFGGRESQKEICVYSPAFKEAEMSTILPLATSIIFNSFYQYATYKDMVLGKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI + Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSEFEKGVREHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +++LEPG + G L+ VI I D+ ILD + + M Sbjct: 241 I---KDFKERYHNIEVVLEPGEAIGWQCGFLIASVIDIV-KNDREIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y ++ D + + + GP C GDF+ A + GD Sbjct: 297 LEMPYRPSILKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDAPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFK-ILKNFSYED 400 >gi|317008698|gb|ADU79278.1| carboxynorspermidine decarboxylase [Helicobacter pylori India7] Length = 405 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 64/405 (15%), Positives = 117/405 (28%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L + + + + A+ S + R + K+ Sbjct: 68 AKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYAAYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 ++ILEPG + G L+ VI I D+ ILD + + M Sbjct: 241 I---KDFKERYHNIEVILEPGEAIGWQCGFLIASVIDIV-KNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y + ++ D I + + GP C GDF+ + GD Sbjct: 297 LEMPYRPSIFKISVENDEELIEVERGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQGFK-ILKNFSYED 400 >gi|302557780|ref|ZP_07310122.1| LOW QUALITY PROTEIN: lysine/ornithine decarboxylase [Streptomyces griseoflavus Tu4000] gi|302475398|gb|EFL38491.1| LOW QUALITY PROTEIN: lysine/ornithine decarboxylase [Streptomyces griseoflavus Tu4000] Length = 383 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 86/381 (22%), Positives = 138/381 (36%), Gaps = 34/381 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y I Y + G+ + +A+KA V+ LA G+G D S E+ Sbjct: 16 ALVYDLDGIAAQYDALAGELPGVG--IRFAVKACPVPEVLARLAGRGAGFDAASPREIAL 73 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 ALA VPA RI + K+ +I A + G+ F +S ++ L + A +A Sbjct: 74 ALATGVPAGRIHYGNTVKSDRDIAEACRLGVRDFATDSVEDVAALGEHAPGARVFCRLA- 132 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + + KFG + A V SG+ +H+GSQ E Sbjct: 133 ---------TSGEGALWGLSRKFGCSADDAVRVLEAARDAGLV-PSGLSVHVGSQQMTAE 182 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-----AYHSDHRPPSSSDYASLIHQY 263 ++ +AF L ++ L G H+++GGGL PP +A L Sbjct: 183 AWQRAFTALAEVLTALHGRGIVPDHVNLGGGLPALGYTDRRGERLDPPLDKIFAVLREGM 242 Query: 264 FG-----NLQCKIILEPGRFLVADVGILVTKVISIKKSADK-----TFVILDVAMNDFMR 313 + ++EPGR LVAD G + V + ++ L + + Sbjct: 243 ERLAGASSRPPAFLVEPGRHLVADHGAIRAHVARLTTRRGPDGERERWLFLSCGKFNGLY 302 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN----RKIALPRPGDLLYIE 369 Y + A + + GP C++ D A R GD +++ Sbjct: 303 EMDQVRYPLVFPSRPDAAGSDLVPVVVAGPTCDSDDAYAHEHPRVRVPRALASGDPVWVL 362 Query: 370 KTGAYGAVQSGT-YNSR-LLI 388 GAY A + +N L Sbjct: 363 SAGAYAASYTTEGFNGFAPLP 383 >gi|317178327|dbj|BAJ56115.1| carboxynorspermidine decarboxylase [Helicobacter pylori F30] Length = 405 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 61/400 (15%), Positives = 106/400 (26%), Gaps = 23/400 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + A R + A S I Sbjct: 68 AKLAF--EEFGGRESHKEICVYGPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKN 125 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD-----MHI 200 +I+ E I K + Sbjct: 126 KQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGIVPSEFEKGVKEHGLEGVSGL 185 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 ++ + L + + + N++ ++ GGG I Sbjct: 186 HFHTHCEQNADALCRTLEHVEKHFKPYLENMEWVNFGGGHHITRSDYDVNLLIQTI---K 242 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 ++ILEPG + G L+T VI I D+ ILD + + M L Y Sbjct: 243 DFKERYHNIEVILEPGEAIGWQCGFLITSVIDIV-KNDQEIAILDASFSAHMPDCLEMPY 301 Query: 321 HEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGDLLYIE 369 ++ D + + + GP C GDF+ + GD + + Sbjct: 302 RPSILKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDVPLKRGDKIVFQ 361 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 Y V++ ++N L ++ F I ++++ Sbjct: 362 DMLHYTIVKNNSFNGVPLPSLARLDQQGFK-ILKNFSYED 400 >gi|297379243|gb|ADI34130.1| carboxynorspermidine decarboxylase [Helicobacter pylori v225d] Length = 405 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 108/400 (27%), Gaps = 23/400 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCTSGLYE 67 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + A R V A + I Sbjct: 68 AKLAF--EEFGGRESQKEVCVYSPAFKEAEMNAILPLATSVIFNSFYQYATYKDRILDKN 125 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD-----MHI 200 +I+ E I + K + Sbjct: 126 KQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSEFEKGVKEHGLEGVSGL 185 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 ++ + L + + + N++ ++ GGG I Sbjct: 186 HFHTHCEQNADALCRTLEHVERHFKPYLENMEWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 +Y ++ILEPG + G L+ VI I D+ ILD + + M L Y Sbjct: 246 ERYHNI---EVILEPGEAIGWQCGFLIASVIDIV-KNDQEIAILDASFSAHMPDCLEMPY 301 Query: 321 HEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGDLLYIE 369 ++ D I + + GP C GDF+ + GD + + Sbjct: 302 RPNILKISVENDEELIEVERGENQGALSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQ 361 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 Y V++ ++N L ++ F I ++++ Sbjct: 362 DMLHYTIVKNNSFNGVPLPSLAKLDQQGFK-ILKNFSYED 400 >gi|218190654|gb|EEC73081.1| hypothetical protein OsI_07046 [Oryza sativa Indica Group] Length = 297 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 7/207 (3%) Query: 8 EGSLHAENVSLEKL---AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 +G L+ E V +E A TPFY YS + +N+ + +A +G+ ++V YA+KAN+N Sbjct: 77 DGHLYCEGVRVEDAMGAAER--TPFYLYSKPQVVRNFTAYRDALEGLRSIVGYAVKANNN 134 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 V++ L LG G +VS ELR AL A R +F+G GKT++++ LA +SG N+ Sbjct: 135 LRVLQLLRELGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKTLEDLVLAAESG-VFVNI 193 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 +SE +L+ + A GKK P+ R+NPD++ H ++TG K KFGI ++ Sbjct: 194 DSEFDLENIVTAARVAGKKVPVLLRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDS 253 Query: 185 AS-TLPGVKISGVDMHIGSQIDQIESF 210 + + GV H+GS I + + + Sbjct: 254 IKSYSNDITLVGVHCHLGSTITKSQPY 280 >gi|307702982|ref|ZP_07639929.1| protein tabA [Streptococcus oralis ATCC 35037] gi|307623375|gb|EFO02365.1| protein tabA [Streptococcus oralis ATCC 35037] Length = 111 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 3/102 (2%) Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 MRP +Y AYH I + + D D+VG +CE D A+NR++ GDLL I T Sbjct: 1 MRPAMYGAYHHITNLTH--PDGPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDT 58 Query: 372 GAYGAVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 GA+G YN++L EI+ + IR ++ Sbjct: 59 GAHGFSMGYQYNAKLRSAEILYTEEGKTRQIRRAERPEDYFA 100 >gi|210134219|ref|YP_002300658.1| carboxynorspermidine decarboxylase [Helicobacter pylori P12] gi|210132187|gb|ACJ07178.1| carboxynorspermidine decarboxylase [Helicobacter pylori P12] Length = 405 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 64/405 (15%), Positives = 117/405 (28%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L + + + + A+ S + T R + K+ Sbjct: 68 ARLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + R N++ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVERHFRPYLENMEWVNFGGGHHITKSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +++LEPG + G L+ VI I D+ ILD + + M Sbjct: 241 I---KDFKERYHNIEVVLEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIH-----------ADIVGPICETGDFIALNRKIALPRPGD 364 L Y ++ D + + GP C GDF+ + GD Sbjct: 297 LEMPYRPSILKISVENDEELVEMEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQGFK-ILKNFSYED 400 >gi|288918894|ref|ZP_06413238.1| Diaminopimelate decarboxylase [Frankia sp. EUN1f] gi|288349746|gb|EFC83979.1| Diaminopimelate decarboxylase [Frankia sp. EUN1f] Length = 529 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 81/397 (20%), Positives = 133/397 (33%), Gaps = 49/397 (12%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLG---SGLDIVSEGELRRALAAPVPAERIV 100 + +A+KANS V+ L G G +I S EL A A A + Sbjct: 108 LRRHLP-PWAHLYFAVKANSFPPVLDALLAGGHGVDGFEISSARELALATDALARAGQPT 166 Query: 101 FSGVGKTIDEIDLALQSGIYCF--------------------------------NVESES 128 + NVES Sbjct: 167 QPRPQRQSQSQLQPPLPPRSRPRLVASGPGKSLSLLRALLDPAAGESSGTVDVVNVESPL 226 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 EL ++ A G+++ +A RVNP + G + FGI ++ S A +L Sbjct: 227 ELLRIDAVATRAGRRSAVALRVNPA-RVGLAGSLRMGGRPSAFGIEEREVPSAVELARSL 285 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 PG+ + G +H S + + + D + G + GG Sbjct: 286 PGIDLVGFHVHAVSGNLDAAAHLEYVRWCLDFAVRQAHEGGFDLRVVDVGGGLGVPFEPD 345 Query: 249 R----PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 R P + + + ++I EPGR LVAD G +V +K+ + F +L Sbjct: 346 RLGERPFDLDLFGDGLARLRPPTDVRVIFEPGRMLVADCGWYAAEVTDVKRVHGEAFAVL 405 Query: 305 DVAMNDFMRPTLYDAYH-------EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI 357 +N F PT ++ H E + P + +VG +C D +A + + Sbjct: 406 RGGINHFQLPTSWEIVHNFAVVPRESWPVGWPRPEVAAGPVTVVGELCTPEDTLARDVTV 465 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 R GD++ GAYG + + I++ Sbjct: 466 DRLRAGDVVVFPMAGAYGYEFAMHEFLGHPRAARIVL 502 >gi|271965222|ref|YP_003339418.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021] gi|270508397|gb|ACZ86675.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021] Length = 432 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 76/408 (18%), Positives = 128/408 (31%), Gaps = 31/408 (7%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT--MVCYALKANSNQAVIKTLAHLG 75 L++LA+ ++ P++ A N +F + D V YA KAN I+T A LG Sbjct: 26 LQELAYGLRGPYHVLFPDAFAANLTSFLDVLDETGVTGRVHYAKKANKAACWIETCADLG 85 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G+D+ S ELR AL V RIV +G K+ D + LA++ G EL + Sbjct: 86 VGVDVASAEELRDALGHGVRGTRIVVTGPAKSDDLLRLAVRQGCLITVDAL-DELDRVA- 143 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + P ++ + + P ++ Sbjct: 144 GLYGARIMLRVTPPDQPHSRFGMTERELERALARCGPLRLEGFSCHLTGYEVQPRADMAA 203 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + + + + + + D P S Sbjct: 204 LLLRWCERARARGIAAGGVGIGGGFAVDYLAAEDWREFTGDPSNFHAGRRFDGFYPYHSP 263 Query: 256 YASLIHQYFGNLQCK-----------------IILEPGRFLVADVGILVTKVISIKKSAD 298 A +ILEPGR L+ G V +V +K Sbjct: 264 VAGAAALRAVLAATPSGGSADVAALLRDAGVTLILEPGRALLDQAGFTVFRVQGVKDRDY 323 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR-KI 357 + ++ + + + I PA + + G C D + R + Sbjct: 324 GIVTVDGTSL--SLSEQWFGSEFLPEPIPVPAREGPAFETCVGGASCLESDMLTWRRIVL 381 Query: 358 A-LPRPGDLLYIEKTGAYGAVQSGT---YNSRLLIPEIMVN-GSQFHI 400 PRPGDLL T Y ++ L P+++VN + + Sbjct: 382 PGRPRPGDLLVYPNTAGYQ--MDSNESPFHGLPLPPKVVVNADGSWRL 427 >gi|307180320|gb|EFN68353.1| Ornithine decarboxylase [Camponotus floridanus] Length = 414 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 80/248 (32%), Gaps = 9/248 (3%) Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 KFG + + G+ + G H+GS +H A + L Sbjct: 101 QCPLGMKFGCDPIHEAPSLLRLAYMLGLNVVGFSFHVGSGCQDPPIYHCAIHHCKILFDM 160 Query: 224 LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADV 283 + G +D+GGG + + + +YF +I EPGRF VA Sbjct: 161 ATNLGFKPYLLDLGGGYPGDKGTSIDKMAEI-INKALDEYFNTDAVHVIAEPGRFYVASA 219 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFM--------RPTLYDAYHEINYIVNPAGDRLH 335 L T + S + V N + L + + I G Sbjct: 220 FTLATNIHSKRSVRGDENSSTTVTHNMYYINDGVYGSFNCLLYDHQHVTPIPLKNGCGKM 279 Query: 336 IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 I + I GP C+ D + N + GD + E GAY + +N + +V Sbjct: 280 IPSSIWGPTCDGLDKVVDNIMLHDMELGDWIIFENMGAYTLPVASPFNGFPIPKVHVVAD 339 Query: 396 SQFHIIRP 403 ++ Sbjct: 340 EDIWLLLK 347 Score = 63.3 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 40/148 (27%), Gaps = 8/148 (5%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 +N++L L FY I + + + ++ YA+K N N VI+ LA Sbjct: 23 IKNIALSGLQEEA---FYVLDIGDIVQKHQIWKEKLPRVEP--YYAVKCNDNLMVIEVLA 77 Query: 73 HLGSGLDIVSEGELRRALA---APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 LG G D S+ +R A P + S Sbjct: 78 ALGVGFDCASKIVIRIRCDAETAQCPLGMKFGCDPIHEAPSLLRLAYMLGLNVVGFSFHV 137 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINAN 157 + + N Sbjct: 138 GSGCQDPPIYHCAIHHCKILFDMATNLG 165 >gi|222823390|ref|YP_002574964.1| carboxynorspermidine decarboxylase [Campylobacter lari RM2100] gi|222538612|gb|ACM63713.1| carboxynorspermidine decarboxylase [Campylobacter lari RM2100] Length = 387 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 45/394 (11%), Positives = 111/394 (28%), Gaps = 33/394 (8%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP Y + KN + + + + ALK + + + SG Sbjct: 11 FTTPAYVVEENKLRKNCELLAKVSEQSEAKILLALKGFAFSGAMDIVGEYLSGCTCSGLW 70 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E + A ++ + + ++ + S ++ K ++A Sbjct: 71 EAK---YAKEYMDKEIHTFSPAFKEDEIDEIIKLSNHLVFNSFNQFKKYKEKAKIKSIGL 127 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + + + + + ++ S + S + + Sbjct: 128 RVNPEFSVAPKEIYNPCGRFSRLGIRAVDFENEDISDVNGLHFHALCEESAHSLELVLNA 187 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + + N++ ++ GGG +H + L ++ Sbjct: 188 FE---------------AKFAKFIKNMKWVNFGGG----HHITKEGYDTQKLIDLCKKFA 228 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 ++ LEPG + G LV V+ I ++ K ++ + + E+ Sbjct: 229 DKYGVQVYLEPGEAVGWQCGTLVASVVDIIENEKKIAILDTSSEAHMPDTIIMPYTSEVL 288 Query: 325 Y---------IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 + G C GD + + G + Y Sbjct: 289 NARILASRDGQNYSELKENEFAYLLGGNTCLAGDIMGEYAFNQELKIGQKIVFLDQAHYS 348 Query: 376 AVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQ 408 V++ T+N L + ++ ++R +++ Sbjct: 349 IVKNTTFNGVKLPNLMFLDKNGNLSMVRE-FSYE 381 >gi|40063551|gb|AAR38340.1| decarboxylase, pyridoxal-dependent [uncultured marine bacterium 582] Length = 375 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 63/373 (16%), Positives = 124/373 (33%), Gaps = 26/373 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGEL 86 P +S + ++Y F G D +V YA+KAN++ V+ LA G D+ S E+ Sbjct: 23 PVLYFSPKVLHESYQRF---LLGFDGLVTYAVKANASSLVLDNLASAGLTTFDVASPAEM 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + AA P+ + + +++ EI A + G+ + V+S++EL L A + Sbjct: 80 QTVRAAL-PSAVLHYHNPVRSLIEIAEAKRFGVQSWAVDSQTELDKLGALATGTEIAVRL 138 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 V FG + + Sbjct: 139 HIPVAGAA--------------YDFGEKFGAGPEQVVALLRRVKQRGLTPSLTFHPGTQC 184 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS--SSDYASLIHQYF 264 + + + + +++ ++VGGG + + + + F Sbjct: 185 TDPAAW-VRYIEVAHAVSQRAEVDLERVNVGGGFAVWRDRQAPDLERVFTQISDCVKALF 243 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 G ++ EPGR +VA L T++ +++ +T + D Sbjct: 244 GEKSPALVCEPGRAMVASAFTLATQIKALR--GLRTVFLNDGVYGLLSEFRDLGVSQRYQ 301 Query: 325 YIVNPAG-DRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTY 382 + + GP C++ D + + + GD L + GAY + + Sbjct: 302 AWRAGSKLAGPSAAYTVFGPTCDSIDKLPSPLHLPKSIQEGDYLLFSEIGAYSLSLATAF 361 Query: 383 NSRLLIPEIMVNG 395 N + V Sbjct: 362 NGYGGCEIVAVTD 374 >gi|308061323|gb|ADO03211.1| carboxynorspermidine decarboxylase [Helicobacter pylori Cuz20] Length = 405 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 63/405 (15%), Positives = 120/405 (29%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN + ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVCQQSGAKILLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L +++ + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI + Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSEFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 ++ILEPG + G L+ VI I D+ ILD + + M Sbjct: 241 I---KDFKERYHDIEVILEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSTHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y + ++ D + + + GP C GDF+ + GD Sbjct: 297 LEMPYRPSIFKISVENDEEIVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFK-ILKNFSYED 400 >gi|317181308|dbj|BAJ59092.1| carboxynorspermidine decarboxylase [Helicobacter pylori F57] Length = 405 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 64/405 (15%), Positives = 121/405 (29%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L +++ + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESQKEICVYSPAFKETEMSAILPLATSIIFNSFYQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSGFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N++ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVEKHFKPYLENMEWVNFGGGHHITRSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +Y +++LEPG + G L+ VI I D+ ILD + + M Sbjct: 241 IKDFKERYHNI---EVVLEPGEAIGWQCGFLIASVIDIV-KNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y ++ D + + + GP C GDF+ + GD Sbjct: 297 LEMPYRPNILKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFK-ILKNFSYED 400 >gi|213646793|ref|ZP_03376846.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 172 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 1/148 (0%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKAN 62 F++ +G L E V L+ LA TPFY +S I +N AF +T +A K Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTC 82 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S V+K + G + S+ E+R+ L ++IVF+GV K +++ A+ + +Y Sbjct: 83 SVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLI 142 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRV 150 NV+S EL+ ++ + L K A + RV Sbjct: 143 NVDSLYELEHIDAISRKLKKVANVCVRV 170 >gi|148285643|gb|ABQ57511.1| LolD [Epichloe festucae] Length = 404 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 121/359 (33%), Gaps = 27/359 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + A D +A+K++ ++ +I+TLA G+G D S E+ Sbjct: 33 FFVADLNDVVRKWAAWKEALP--DATPFFAVKSSYDRRLIQTLATCGAGFDCASAEEIEL 90 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ + AERI+F+ K + + L + GI ++E EL+ L+ I Sbjct: 91 TLSLGIGAERIIFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHHHYPEAQTVLRIF- 149 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + KFG + L L S Sbjct: 150 ---------ADDPTNADPLGTKFGAARNDFDGLVRLVKELNMQLAGASFHAAPSVAVDAA 200 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ + + ++ + R G N +D+GGG + A G + Sbjct: 201 AYVRGIRDAAEVFARARQVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFTSQVGEGR 260 Query: 269 CKIILEPGRFLVADVGILVTKVISI--------KKSADKTFVILDVAMNDFMRPTLYDAY 320 +I+ EPG L KV++ + A + ++ + N MR + + Sbjct: 261 LRILAEPGTLFSCSPFYLAVKVVARRVNATAFGHEPATRLYINDGIYSNFMMRFIVNMTF 320 Query: 321 HEI------NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 + + G C++ D I + ++ GD L + G Sbjct: 321 SPTAVIREGVWHDQADHTMRGEACSLWGRSCDSNDCINRDCRLGMKVGVGDWLVFKDMG 379 >gi|332672809|gb|AEE69626.1| carboxynorspermidine decarboxylase [Helicobacter pylori 83] Length = 405 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 107/400 (26%), Gaps = 23/400 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + A R + A S I Sbjct: 68 AKLAF--EEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKN 125 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD-----MHI 200 +I+ E I K + Sbjct: 126 KQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGIVPSEFEKGVKEHGLEGVSGL 185 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 ++ + L + + + N+ ++ GGG I Sbjct: 186 HFHTHCEQNADALCRTLEHVEKHFKPYLENVAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 +Y ++ILEPG + G L+ VI I D+ ILD + + M L Y Sbjct: 246 ERYHNI---EVILEPGEAIGWQCGFLIASVIDIV-KNDQEIAILDASFSAHMPDCLEMPY 301 Query: 321 HEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGDLLYIE 369 ++ D I + + GP C GDF+ A + GD + + Sbjct: 302 RPSILKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQ 361 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 Y V++ ++N L ++ F I ++++ Sbjct: 362 DMLHYTIVKNNSFNGVPLPSLARLDQQGFK-ILKNFSYED 400 >gi|221638392|ref|YP_002524654.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides KD131] gi|221159173|gb|ACM00153.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides KD131] Length = 381 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 70/362 (19%), Positives = 132/362 (36%), Gaps = 20/362 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P +S + ++ F + F GM V YA+K+N + VI+ LA G G D+ S E+ Sbjct: 23 PVLFFSPSTLQATARRFIDGFPGM---VTYAVKSNPEEVVIENLAAAGIRGYDVASPHEI 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R A + ++ ++ EI + ++ G+ ++V+S SEL L + + G + + Sbjct: 80 RMIRRIAPDAA-LHYNNPVRSRSEIGVGVEMGVKSWSVDSASELAKLIELVPAEGCEIAV 138 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 F++ A KFG + L + I + H G+Q Sbjct: 139 RFKLPVSGAA--------YNFGAKFGATVELAVELLRRVAEAGF--IPSMTFHPGTQCTD 188 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ + ++ + + + + + FG Sbjct: 189 PAAWETYIRTAAEIARDAGVTIARLNVGGGFPSHRLNGVEPELEAIFHLIDRVTDEAFGA 248 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + ++ EPGR + AD L ++ +++ D + D L + + Sbjct: 249 DRPLLVCEPGRGICADAFTLAARIKAVR--DDAHVFLNDGVYGSLTELPLIGVIDRVAVL 306 Query: 327 VNPAGDRLHIHAD--IVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYN 383 R D I GP C++ D + +A GD L + GAY A + +N Sbjct: 307 TPEGRRRDGETRDRIIFGPTCDSVDRLPGELPLAADVEEGDFLVFQGMGAYSAATNTRFN 366 Query: 384 SR 385 Sbjct: 367 GF 368 >gi|208433995|ref|YP_002265661.1| carboxynorspermidine decarboxylase [Helicobacter pylori G27] gi|208431924|gb|ACI26795.1| carboxynorspermidine decarboxylase [Helicobacter pylori G27] Length = 405 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 66/405 (16%), Positives = 118/405 (29%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQRLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L + + + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITKSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 ++ILEPG + G L+ VI I D+ ILD + + M Sbjct: 241 I---KDFKERYHNIEVILEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y V+ D+ I + + GP C GDF+ + GD Sbjct: 297 LEMPYRPSILKVSVENDKELIEVERGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQGFK-ILKNFSYED 400 >gi|317010302|gb|ADU84049.1| carboxynorspermidine decarboxylase [Helicobacter pylori SouthAfrica7] Length = 405 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 62/405 (15%), Positives = 120/405 (29%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN + ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNANILEIVRQQSGAKILLALKGYAFWREFGILRKKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L +++ + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESQKEICVYSPAFKEAEINAILPLATSVIFNSFYQYTTYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI + + Sbjct: 128 LEKLGLSPIKMGLRINPLYSEVTPAIYNPCTKTSRLGIAPSEFEKGVKEHGLEGVNGLHF 187 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 ++ + L + + + ++ ++ GGG I Sbjct: 188 -------HTHCEQNADALCRTLEHVERHFKPYLEGMEWVNFGGGHHITRSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +Y +++LEPG + G L+ VI I + ILD + + M Sbjct: 241 IKDFKERYHNI---EVVLEPGEAIGWQCGFLIASVIDIV-KNGQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y ++ D I + + GP C GDF+ + GD Sbjct: 297 LEMPYRPSILKISIENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KILFKDMLHYTIVKNNSFNGVPLPSLAKIDEQGFK-ILKNFSYED 400 >gi|316967348|gb|EFV51783.1| putative pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Trichinella spiralis] Length = 445 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 120/353 (33%), Gaps = 26/353 (7%) Query: 39 KNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG---ELRRALAAPVP 95 + + + Y+++ N N+A+++ L LG + S+ E+ + V Sbjct: 70 HQHKLWLKCLPRVKP--FYSVRCNGNEALLQILNRLGLSFECKSKACVTEIESVMKVGVS 127 Query: 96 AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN 155 E I+++ KT ++ A+ + ++E EL + + + I Sbjct: 128 PEEILYANPCKTAKQVQHAMMRSVRKLVFDNEDELYKVKRFFPTAELILRINV------- 180 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFK 215 + + FG + L +K+ G+ H+GS D F +A Sbjct: 181 --SDTTTTVLSPNLNFGCDPESQGPSLLVLAMLLDLKVIGISFHVGSNCDDGTLFAEAIA 238 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEP 275 R L + GH ++ +D+GGG + + + SL + + ++ EP Sbjct: 239 HSRRLFDYATALGHKMRLLDIGGGFPGQNMAKFQAIADEVNRSLEKHFPTDSGVDVVAEP 298 Query: 276 GRFLVADVGILVTKVISIKKSADKTFVILDVAMND-----------FMRPTLYDAYHEIN 324 GRF L VI+ + + N + Sbjct: 299 GRFYAEKAFTLCCTVIARRTVPANQITKNEADRNSFGYTYSINDGVYGSFNCILCDTGKP 358 Query: 325 YIVNPAGDRLHIHAD-IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 R ++ + GP ++ D + ++ + GD++ E GAY Sbjct: 359 MATVLKEGREKLYWTSVCGPTDDSLDLVIAQCRMPMLGEGDVIVFENMGAYTF 411 >gi|260576326|ref|ZP_05844317.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sp. SW2] gi|259021397|gb|EEW24702.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sp. SW2] Length = 381 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 128/360 (35%), Gaps = 16/360 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P +S ++ + F + F G +V YA+K+N + VI+ L+ G G D+ S E+ Sbjct: 23 PVMFFSPAVLQASARRFLDGFPG---LVTYAVKSNPEEVVIENLSAAGIRGFDVASPAEM 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R A + ++ + EI +A+ G+ ++V+S SEL L + + + + Sbjct: 80 RMIRRLCPDAA-MHYNNPVRARSEIAVAVGLGVKSYSVDSASELAKLIELVPAENCEITV 138 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 F++ A KFG + SL + I + H G+Q Sbjct: 139 RFKLPVSGAA--------YNFGAKFGATVELATSLLKTVAAAGF--IPSITFHPGTQCTD 188 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ + + + + + + + FG+ Sbjct: 189 PHAWEAYIRAAAQIAADAGVTIARLNVGGGFPNHRLHGVVPQLDATFELIDRVTGEAFGD 248 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + ++ EPGR L D L T+V +++ A + + Sbjct: 249 DRPLLVCEPGRGLCGDAFTLATRVKALRDDAHVFLNDGVYGALAELPLVGVIDRIAVISP 308 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + + GP C++ D + + +A GD + + GAY + +N Sbjct: 309 EGARREGTEVPRIVFGPTCDSVDRLPGDVLLADDLAEGDYVVFQGMGAYSCATNTRFNGF 368 >gi|183597146|ref|ZP_02958639.1| hypothetical protein PROSTU_00386 [Providencia stuartii ATCC 25827] gi|188023457|gb|EDU61497.1| hypothetical protein PROSTU_00386 [Providencia stuartii ATCC 25827] Length = 467 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 65/414 (15%), Positives = 121/414 (29%), Gaps = 35/414 (8%) Query: 9 GSLHAEN-VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQ 65 L EN L +L +P +++N L + F + Y +K N + Sbjct: 35 KRLCFENNERLVELVKQYGSPLNVIFPHTMQQNILKLNAVFQEHGVTGCIMYGVKVNQSN 94 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 ++K G G+D+ S E + A + E+I +G KT + + + Sbjct: 95 ILVKIAVEEGIGVDVSSLHEWQDAYDYGISPEKICATGPAKTNEFLWKLILHNSLIIVDS 154 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDIN---------------------ANTHKKIST 164 EL+ + A + FR P ++ A + Sbjct: 155 L-EELQDILNLLSGTSFIARVLFRYQPQMSRSRFGMKSAAFITALQLAKQHAGLLWQGIH 213 Query: 165 GKKEDKFGIPIHQIHSLYAYASTLP---GVKISGVDMHIGSQIDQIESFHKAFKLLRDLT 221 Q G +I +D+ G + + + + + Sbjct: 214 FHLGGYKSASRVQAFRELQPLIKSALSLGFEIKTIDIGGGLPVQYVSTRQYQSWIDNQTS 273 Query: 222 QQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVA 281 Q ++N GG S I QY + +EPGR LV Sbjct: 274 QYYQNNRIPTDFYPYGGEQSATQWLTTFLSSQYTENETISQYLKKNHITLTIEPGRCLVD 333 Query: 282 DVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY----HEINYIVNPAGDRLHIH 337 I + +V+ + + + ++ + + + + + Sbjct: 334 QSAISLFRVVRVNQQFQHPIIFVEGSSFSACETWFNSEFLLDPLHVLVPHSKQHKQRPTR 393 Query: 338 ADIVGPICETGDFIALNRKI--ALPRPGDLLYIEKTGAYGAV-QSGTYNSRLLI 388 I G C D I + LP+ GDLL T Y ++ + Sbjct: 394 VWIAGHSCLENDVITHRLILFTHLPQAGDLLIFINTAGYQMDLLENQFHRHPIP 447 >gi|308233662|ref|ZP_07664399.1| diaminopimelate decarboxylase [Atopobium vaginae DSM 15829] gi|328943708|ref|ZP_08241173.1| hypothetical protein HMPREF0091_10398 [Atopobium vaginae DSM 15829] gi|327491677|gb|EGF23451.1| hypothetical protein HMPREF0091_10398 [Atopobium vaginae DSM 15829] Length = 443 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 76/460 (16%), Positives = 148/460 (32%), Gaps = 70/460 (15%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +A TP Y A ++ G +CY++KAN + K G Sbjct: 6 LATIAQTYATPTYVLDEQAFKQRLEHVKKIM-GTSIDLCYSIKANPFLS--KAAQACGFK 62 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 L++ S GEL V + IV+SGV K D+I AL+ G+ ES + + + Sbjct: 63 LEVCSPGELEICKRLHVDPKAIVYSGVCKQTDDIQAALRYGVGVCTAESVLQALLIER-- 120 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 ++ + + + +FG+ + L + G+ Sbjct: 121 ------EAAKLDKQGLLSKSPVRVLLRLNAGSQFGMCQDDLEHLINNRAHFMHCSFVGIH 174 Query: 198 MHIGSQIDQ-IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +G+Q + + +L + + Q ++ G GL Y D + Sbjct: 175 YFVGTQRKKLTHQEKELVRLEALIDELESKYNWKCQRLEYGPGLAYPYFIDQDASDTLLP 234 Query: 257 ASLIHQYFGN--LQCKIILEPGRFLVADVGILVTKVISIKKSAD--KTFVILDVAMNDFM 312 A + + + +E GRF ++ G +T+++ IK D + +D +N Sbjct: 235 AKELAPALQRIANRVPLTVEMGRFFASECGTYLTRIVDIKHGQDTKTNYAFIDGGINHVS 294 Query: 313 RPTLYD------------------------------------------AYHEINYIVNPA 330 Sbjct: 295 YLGQMMGLKCPSIINVSQQQATCLDVSTCEDEAQQKLALSTQAQSKLEEPQPFAQADESE 354 Query: 331 GDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIP 389 G R + G +C T D + + + D+L + GAY ++ + SR + Sbjct: 355 GGRYTSSWTLCGSLCTTSDVLVREYE-SSLGLNDILAFQHIGAYSITEAMYLFLSRDMPR 413 Query: 390 EIMVNGSQFHIIRPRMTFQELIELDSIPAWLQKTPKQSSE 429 ++ + H + ++ + D IP + P+ + + Sbjct: 414 IVVR---KAHGV-----YE--LARDFIPTNVYNYPQNADK 443 >gi|146279119|ref|YP_001169278.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides ATCC 17025] gi|145557360|gb|ABP71973.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides ATCC 17025] Length = 381 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 70/362 (19%), Positives = 136/362 (37%), Gaps = 20/362 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 P +S + ++ F + F GM V YA+K+N + VI+ LA G G D+ S E+ Sbjct: 23 PVLFFSPSILQATARRFIDGFPGM---VTYAVKSNPEEVVIENLAAAGIRGYDVASPHEI 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R A + ++ ++ EI +A++ G+ ++V+S+SEL L + + G + + Sbjct: 80 RMIRRIAPDAA-LHYNNPVRSRAEIAVAVEMGVKSWSVDSKSELAKLIELVPAEGCEISV 138 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 F++ A KFG + L + I + H G+Q Sbjct: 139 RFKLPVSGAA--------YNFGAKFGATVELAIELLKTVAEAGF--IPSMTFHPGTQCTD 188 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ + ++ ++ + + + + FG Sbjct: 189 PAAWETYIRTAAEIAREAGVTIARLNVGGGFPSHRLNGVEPELEAIFHLIDRVADEAFGA 248 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + ++ EPGR + AD L T++ +++ D + D L ++ + Sbjct: 249 DRPLLVCEPGRGICADAFTLATRIKAVR--DDAHVFLNDGVYGSLTELPLIGVIDRVSVL 306 Query: 327 VNPAGDRLHIHAD--IVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYN 383 R D I GP C++ D + ++ GD L + GAY + +N Sbjct: 307 TPEGRRREGETRDRIIFGPTCDSVDRLPGELPLSVDVAEGDFLVFQGMGAYSTATNTRFN 366 Query: 384 SR 385 Sbjct: 367 GF 368 >gi|308183818|ref|YP_003927951.1| carboxynorspermidine decarboxylase [Helicobacter pylori SJM180] gi|308059738|gb|ADO01634.1| carboxynorspermidine decarboxylase [Helicobacter pylori SJM180] Length = 405 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 65/405 (16%), Positives = 117/405 (28%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVCQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L + + + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITKSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +++LEPG + G L+ VI I D+ ILD + + M Sbjct: 241 I---KDFKERYHNIEVVLEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y V+ D I + + GP C GDF+ + GD Sbjct: 297 LEMPYRPSILKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEKPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQGFK-ILKNFSYED 400 >gi|154148229|ref|YP_001405731.1| carboxynorspermidine decarboxylase [Campylobacter hominis ATCC BAA-381] gi|153804238|gb|ABS51245.1| carboxynorspermidine decarboxylase [Campylobacter hominis ATCC BAA-381] Length = 408 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 55/393 (13%), Positives = 110/393 (27%), Gaps = 23/393 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 + ++TP Y A+ +N + + V ALK + + + G Sbjct: 3 INEIKTPAYVCEKDALLRNLELLKSVGEESGAKVLCALKGFAFSLAMPYIGEFLRGATCS 62 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS--------GIYCFNVESESELKTL 133 E + A +G + + + + Sbjct: 63 GLFEAKYANDLIKGGLSENMQKMGNKNYKNIEIHTYSPAFKDDDMDEILQISNHVVFNSF 122 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 +Q K + +N T + + A + + Sbjct: 123 SQWKKFRQKAIISGVKCGLRVNPQTSFSPVENYNPCGKFSRLGITIENFKNALNVENSLL 182 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G+ + ES ++R+ Q ++ I+ GGG I + Sbjct: 183 DGIS-GLHLHALCEESSEHLQTVVREFEMQFGEFIPRMKWINFGGGHHITKKGYNVEL-- 239 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 ++ + ++ +EPG + G LV V+ I ++ K ++ A Sbjct: 240 --LVKILKDFSQKWGVEVYIEPGEAVGWQCGYLVASVLDIVENGVKIAILDTSAEAHMPD 297 Query: 314 PTLYDAYH----EINYIVNPAGDRLHIHADIVGPICETGDFIA------LNRKIALPRPG 363 L EI+ + G C GD I L + G Sbjct: 298 TVLMPYRPAVRDEISSCDKKLKNGEIFSYRFGGNTCLAGDIIGLESGEPLYCFEKPLKIG 357 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS 396 D + E Y V++ T+N L +++ + Sbjct: 358 DRIIFEDQIHYTIVKNTTFNGIKLPDLYLIDKN 390 >gi|56118620|ref|NP_001007944.1| antizyme inhibitor 1 [Xenopus (Silurana) tropicalis] gi|51513230|gb|AAH80451.1| oazin protein [Xenopus (Silurana) tropicalis] gi|89270945|emb|CAJ81895.1| antizyme inhibitor 1 [Xenopus (Silurana) tropicalis] Length = 442 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 104/360 (28%), Gaps = 32/360 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N ++ Y ++ NS+ AV++ LA L G ++ E+ Sbjct: 40 FFVADLGKIVKKHFKWKNIMGRVNP--FYTVRCNSSPAVLEILAALSMGFACANKNEMSL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 +P E V++ K +I A + G+ +SE+ELK + + + IA Sbjct: 98 VYDLGIPMENAVYTNPCKQASQIKHAAKIGVNLMTCDSETELKKIARNHFNAKLLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T FG + L A L + S Q Sbjct: 157 ---------TEGISGEEDMNMTFGTTLKNCRHLLECAKELSVEVVGVKFHVSSSNNPQTY 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + + NI I ++ S + Sbjct: 208 IHALSDARCVFDMAEELGFKMNILDIGGISENEAQLEELYQAVSPLL----DVYFPEGSG 263 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTF----------------VILDVAMNDFM 312 +II EPG F V+ L V++ + + F Sbjct: 264 TRIIAEPGSFYVSSAFTLAVNVMAKNVIEHDQHLPSAGKQISNKPAFIYCMNEGVYGSFA 323 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 R D + ++GP + D I + + GD + E G Sbjct: 324 RKLSEKLNTAPEVHKKYKDDEPLFASSLLGPSYDELDVIVEHCLLPELEVGDWVVFENMG 383 >gi|261837475|gb|ACX97241.1| carboxynorspermidine decarboxylase [Helicobacter pylori 51] Length = 405 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 66/405 (16%), Positives = 122/405 (30%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFEVLRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L +++ + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGIVPSGFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVEKHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +Y +++LEPG + G L+ VI I D+ ILD + + M Sbjct: 241 IKDFKERYHNI---EVVLEPGEAIGWQCGFLIASVIDIV-KNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y ++ D I + + GP C GDF+ A + GD Sbjct: 297 LEMPYRPSILKISVENDEELIEVEKGENQGVFSYFLGGPTCLAGDFMGSFSFEAPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFK-ILKNFSYED 400 >gi|300727208|ref|ZP_07060624.1| carboxynorspermidine decarboxylase [Prevotella bryantii B14] gi|299775446|gb|EFI72040.1| carboxynorspermidine decarboxylase [Prevotella bryantii B14] Length = 384 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 58/380 (15%), Positives = 108/380 (28%), Gaps = 22/380 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + N S + A KA + S E + Sbjct: 10 PVYVLEEQRLRNNLSLISEVARTGGIDIILAFKAYALWKTFPIFREYIRATTASSLSEAK 69 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A + T EID S S+ + +QR + + Sbjct: 70 LA--LLEFGSKAHTFSPAYTDYEIDEIAHC-SSHLTFNSLSQYQRYHQRVRQANSEISLG 126 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NP+ + + +FG+ ++ + Sbjct: 127 IRINPEYSEIETDLYNPCAPGTRFGVSADKLPEILPEDI-----------EGFHCHCHCE 175 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + + I+ I+ GGG + P +Y Sbjct: 176 NGSDVFQRTLTHIEDKFAKWFPQIKWINFGGGHLMTRKDYDIPLLIQILTDFKKKYPNLH 235 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 +ILEPG G LV++V+ + + IL+V+ M L Y Sbjct: 236 ---VILEPGSAFGWQTGSLVSQVVDVVEDKGIKTAILNVSFTCHMPDCLEMPYWPSVRNA 292 Query: 328 N----PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + + G C +GDF+ + + G+ + E Y V++ +N Sbjct: 293 KVIEGRYDKSIPYLYRLGGNSCLSGDFMESWQFDHELQIGENIIFEDMLHYTTVKTNMFN 352 Query: 384 SRLLIPEIMVN-GSQFHIIR 402 +V+ + I++ Sbjct: 353 GITHPSIGIVHLNGELEILK 372 >gi|154707006|ref|YP_001424392.1| non-ribosomal peptide synthetase module-containing protein [Coxiella burnetii Dugway 5J108-111] gi|154356292|gb|ABS77754.1| non-ribosomal peptide synthetase module-containing protein [Coxiella burnetii Dugway 5J108-111] Length = 499 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 66/272 (24%), Positives = 114/272 (41%), Gaps = 2/272 (0%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 S+ K A TPFY Y +T +EK + + A + Y++KAN N A+ L LG+ Sbjct: 11 SIVKAADQFGTPFYGYDSTVLEKTFNSLREALPKS-VDIFYSIKANPNIAICSELRRLGA 69 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 ++ S E+ A+ A I+F G K+ EI L+ G+Y ES E K ++ Sbjct: 70 CAELCSYYEILAAIKAGFNPSNIIFVGPAKSDKEIQKCLELGVYAIVCESIEEFKRISNL 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 A GKKA +A R+NP + + + G K +FG+ + S + +P + + G+ Sbjct: 130 ANRAGKKARVALRINPSHVSKS-ALLKMGGKPSQFGMDEEIVFSNKNFFLKMPNINLVGI 188 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 ++ G++I + E+ + + +L + + H + GG I + S Sbjct: 189 HVYNGTRILKAETIVENTTYILNLARTFQKEWHQSFEMVDIGGWVITHWSSVPSIIQLLN 248 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVT 288 + + G L D Sbjct: 249 QLKKLKKENFPSVSYSIFCGEALTLDTVRRWK 280 >gi|109948161|ref|YP_665389.1| carboxynorspermidine decarboxylase [Helicobacter acinonychis str. Sheeba] gi|109715382|emb|CAK00390.1| carboxynorspermidine decarboxylase [Helicobacter acinonychis str. Sheeba] Length = 405 Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 64/405 (15%), Positives = 121/405 (29%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN + ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNANILEIVHQQSGAKILLALKGYAFWREFGILRKKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L +++ + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESQKEICVYSPAFKEAEINAILPLATSIIFNSFYQYTTYKDRILEKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI + Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPAIYNPCSKASRLGIVPSEFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + ++ ++ GGG I Sbjct: 183 --NGLHFHTHCEQNADALCRTLEHVERHFKPYLEGMEWVNFGGGHHITRSDYDVDLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +Y ++ILEPG + G L+ VI I D+ ILD + + M Sbjct: 241 IKDFKERYCNI---EVILEPGEAIGWQCGFLLASVIDI-IKNDQEIAILDTSFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y ++ D I + + GP C GDF+ + GD Sbjct: 297 LEMPYRPSILKISIENDGELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KILFKDMLHYTIVKNNSFNGIPLPSLAKIDEQGFK-ILKNFSYED 400 >gi|307636706|gb|ADN79156.1| putative carboxynorspermidine decarboxylase [Helicobacter pylori 908] gi|325995291|gb|ADZ50696.1| putative Carboxynorspermidine decarboxylase [Helicobacter pylori 2018] Length = 405 Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 67/407 (16%), Positives = 121/407 (29%), Gaps = 33/407 (8%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + TP Y + +EKN V ALK + L +G Sbjct: 6 TIPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGL 65 Query: 84 GE--LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E L + + + + A+ S + T R + Sbjct: 66 YEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKN 125 Query: 142 KK--------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 K+ + R+NP + T + K + GI + Sbjct: 126 KQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSEFEKGVKEHGLEGV--- 182 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + ++ + L + + + N+ ++ GGG I Sbjct: 183 ----SGLHFHTHCEQNADSLCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLI 238 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 +Y ++ILEPG + G L+ VI I D+ ILD + + M Sbjct: 239 QTIKDFKKRYHDI---EVILEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSAHMP 294 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRP 362 L Y ++ D I + + GP C GDF+ + Sbjct: 295 DCLEMPYRPSILKISVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKR 354 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 GD + + Y V++ ++N L + SQ I ++++ Sbjct: 355 GDKIVFQDMLHYTIVKNNSFNGVPLPS-LAKIDSQGFKILKSFSYED 400 >gi|325996891|gb|ADZ49099.1| putative carboxynorspermidine decarboxylase [Helicobacter pylori 2017] Length = 405 Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 67/407 (16%), Positives = 121/407 (29%), Gaps = 33/407 (8%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + TP Y + +EKN V ALK + L +G Sbjct: 6 TIPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGL 65 Query: 84 GE--LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E L + + + + A+ S + T R + Sbjct: 66 YEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKN 125 Query: 142 KK--------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 K+ + R+NP + T + K + GI + Sbjct: 126 KQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSEFEKGVKEHGLEGV--- 182 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + ++ + L + + + N+ ++ GGG I Sbjct: 183 ----SGLHFHTHCEQNADSLCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLI 238 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 +Y ++ILEPG + G L+ VI I D+ ILD + + M Sbjct: 239 QTIKDFKKRYHDI---EVILEPGEAIGWQCGFLIASVIDIV-QNDQESAILDASFSAHMP 294 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRP 362 L Y ++ D I + + GP C GDF+ + Sbjct: 295 DCLEMPYRPSILKISVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKR 354 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 GD + + Y V++ ++N L + SQ I ++++ Sbjct: 355 GDKIVFQDMLHYTIVKNNSFNGVPLPS-LAKIDSQGFKILKSFSYED 400 >gi|313905630|ref|ZP_07838992.1| carboxynorspermidine decarboxylase [Eubacterium cellulosolvens 6] gi|313469577|gb|EFR64917.1| carboxynorspermidine decarboxylase [Eubacterium cellulosolvens 6] Length = 432 Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 70/429 (16%), Positives = 118/429 (27%), Gaps = 54/429 (12%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP Y +E+N + + A KA S A + G E Sbjct: 8 TPAYVVDEKKLEENLRILKEVGEQAGCKILLAQKAFSMFAEYPLIGRYLDGATASGLFEA 67 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R + E VFS K + ++A FN S+ + + Sbjct: 68 RLGAE-KMRKENHVFSPAYKEEEMDEIASVCDHVIFNSVSQVRKY----AGRPSCAETSL 122 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 RVNP+ + H + G+ + ++ A KISG+ H + + Sbjct: 123 GLRVNPECSTQEHGIYDPCASFSRLGVTVEKLEKELAEDDGF-WSKISGLHCHTLCEQNS 181 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 L + I+ +++GGG I R L Y Sbjct: 182 DALEVTVEALEEKFGK--YLQSPQIRWLNLGGGHHITRADYDRERLIRIVRRLRETYQVE 239 Query: 267 LQCKI---ILEPGRFLV-----------------ADVGILVTKVISIKKSA--------- 297 + + I +LV A + V+ + Sbjct: 240 VYLEPGEAIALNAGYLVTEVLDEVDNGLTTLLLDASAACHMPDVLEMPYQPPLQGAEQVP 299 Query: 298 ------DKTFVILDVAMNDFMRPTLYDAYHEINY---------IVNPAGDRLHIHADIVG 342 D + DA +N + G+ + Sbjct: 300 RIENLADLRALEKRGMKTVAPDREQEDASCGMNPSRVADSASGDNSNLGEEKAYVYRLSS 359 Query: 343 PICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI-MVNGSQFHII 401 C GD I RPGD LY E Y V++ T+N L M + ++ Sbjct: 360 CTCLAGDVIGDYCFDHPVRPGDRLYFEDMAIYSMVKNNTFNGMALPSIWRMKPDGECVLV 419 Query: 402 RPRMTFQEL 410 + +++ Sbjct: 420 KK-FGYEDF 427 >gi|318058910|ref|ZP_07977633.1| lysine/ornithine decarboxylase [Streptomyces sp. SA3_actG] Length = 378 Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 85/378 (22%), Positives = 147/378 (38%), Gaps = 30/378 (7%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 Y I Y V +A+KA + V++ LA +G+G+D ELR+AL Sbjct: 2 YDLDGIRARYAELCRELPS--AAVRFAMKAAPDDGVLRALAAVGAGVDAAGPQELRQALR 59 Query: 92 APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVN 151 A P E + + K+ +I A G+ F +S +L L + A IA Sbjct: 60 AGFPVESVHYGNTIKSDADIAEAYALGVRLFVTDSREDLAALARHAPGARVFCRIAVEGG 119 Query: 152 PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFH 211 + + KFG + L A L V SG+ +H+GSQ +++ Sbjct: 120 SAL----------WGLKHKFGCAPDEGVRLLREAVDLGLV-PSGLSVHVGSQQMDPDAWR 168 Query: 212 KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIH----- 261 +A + L + + L G + H+++GGGL + PP +A+L Sbjct: 169 EACERLAAVLEALGEAGITLDHVNLGGGLPARGYLSAAGEPLDPPLDKIFATLREGVERL 228 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVI--SIKKSADKTFVILDVAMNDFMRPTLYDA 319 + +++EPGR+LVAD G + +V+ + ++ D Sbjct: 229 RAVHGGHLDVVMEPGRWLVADHGTIHARVVRLTRRRMPDGVLQHWLYLSCGKFNGLYEMD 288 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR---KIA-LPRPGDLLYIEKTGAYG 375 + + A + GP C++ D A +R ++ R GD + I GAY Sbjct: 289 ALQYRLRFPTRSAAPRVPAVVAGPTCDSDDAFAHDRGHVRVPADLRSGDPVEILSCGAYA 348 Query: 376 AVQSGT-YNSRLLIPEIM 392 + +N +P ++ Sbjct: 349 LSYTTRGFNGFSPLPVVL 366 >gi|317013444|gb|ADU80880.1| carboxynorspermidine decarboxylase [Helicobacter pylori Gambia94/24] Length = 405 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 66/407 (16%), Positives = 119/407 (29%), Gaps = 33/407 (8%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + TP Y + +EKN V ALK + L +G Sbjct: 6 TIPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGL 65 Query: 84 GE--LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E L + + + + + S + T R + Sbjct: 66 YEAKLAFEEFGGRESHKEICVYSPAFKEAEMSTILPLATSIIFNSFHQYATYKDRILDKN 125 Query: 142 KK--------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 K+ + R+NP + T + K + GI Sbjct: 126 KQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKTSRLGITPSGFEKGVKEHGLEGV--- 182 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + ++ + L + + + N+ ++ GGG I Sbjct: 183 ----SGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLI 238 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 +Y ++ILEPG + G L+ VI I D+ ILD + + M Sbjct: 239 QTIKDFKERYHNI---EVILEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSAHMP 294 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRP 362 L Y V+ D + + + GP C GDF+ + Sbjct: 295 DCLEMPYRPSILKVSVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKR 354 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 GD + + Y V++ ++N L + SQ I ++++ Sbjct: 355 GDKIVFQDMLHYTIVKNNSFNGVPLPS-LAKIDSQGFKILKSFSYED 400 >gi|217034692|ref|ZP_03440095.1| hypothetical protein HP9810_880g3 [Helicobacter pylori 98-10] gi|216942832|gb|EEC22327.1| hypothetical protein HP9810_880g3 [Helicobacter pylori 98-10] Length = 405 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 107/400 (26%), Gaps = 23/400 (5%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + A R + A S I Sbjct: 68 AKLAF--EEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKN 125 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD-----MHI 200 +I+ E I K + Sbjct: 126 KQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGIVPSEFEKGVKEHGLEGVSGL 185 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 ++ + L + + + N++ ++ GGG I Sbjct: 186 HFHTHCEQNADALCRTLEHVEKHFKPYLENMEWVNFGGGHHITRSDYDVNLLIQTIKDFK 245 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 +Y +++LEPG + G L+ VI I D+ ILD + + M L Y Sbjct: 246 ERYHNI---EVVLEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSVHMPDCLEMPY 301 Query: 321 HEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGDLLYIE 369 ++ + + + GP C GDF+ A + GD + + Sbjct: 302 RPSILKISVENGEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQ 361 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 Y V++ ++N L ++ F I ++++ Sbjct: 362 DMLHYTIVKNNSFNGVPLPSLARLDQQGFK-ILKNFSYED 400 >gi|87199811|ref|YP_497068.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM 12444] gi|87135492|gb|ABD26234.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM 12444] Length = 401 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 105/341 (30%), Gaps = 14/341 (4%) Query: 49 DGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKT 107 + YA+KAN + +++ L G D+ S E+R A A V Sbjct: 37 EKFPGKSLYAVKANPSADLLRVLWDSGVTHYDVASIAEVRLVRATLPEATLCFMHPVKAP 96 Query: 108 IDEIDLALQSGIYCFNVESESELKTLNQRA-VSLGKKAPIAFRVNPDINANTHKKISTGK 166 + Q G+ F+++S EL+ + + + + RV+ D + Sbjct: 97 AAIREAYEQHGVRVFSLDSFEELEKIKEACGFAEDLTLCVRLRVSSDYSE--------LS 148 Query: 167 KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 KFG + L GV H+GSQ ++ +A + +R Sbjct: 149 LASKFGCDLTNAAELLQATRQAA--DSLGVCFHVGSQSMSPHAYVQALERVRAAIVDASV 206 Query: 227 NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 I + + ++ EPGR L A+ + Sbjct: 207 TVDIIDVGGGFPSIYPGMEPPPLEDYFGVIDRTYESLPISYSAELWCEPGRALCAEYNSM 266 Query: 287 VTKVISIKKSA-DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 + +V + + + + + N + GP C Sbjct: 267 IVRVERRRGAELYINDGAYGALFDAAHVGWRFPVRVLREEVANDGVEIEMEPFSFYGPTC 326 Query: 346 ETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + D + ++ + GD + I GAYGA +N Sbjct: 327 DDMDHMEGPFELPADMKVGDYIEIGMLGAYGAAMKTAFNGF 367 >gi|333028924|ref|ZP_08456988.1| putative lysine/ornithine decarboxylase [Streptomyces sp. Tu6071] gi|332748776|gb|EGJ79217.1| putative lysine/ornithine decarboxylase [Streptomyces sp. Tu6071] Length = 378 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 85/378 (22%), Positives = 146/378 (38%), Gaps = 30/378 (7%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 Y I Y V +A+KA + V++ LA +G+G+D ELR+AL Sbjct: 2 YDLDGIRARYAELCRELPS--AAVRFAMKAAPDDGVLRALAAVGAGVDAAGPQELRQALR 59 Query: 92 APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVN 151 A P E + + K+ +I A G+ F +S +L L + A IA Sbjct: 60 AGFPVESVHYGNTIKSDADIAEAYALGVRLFVTDSREDLAALARHAPGARVFCRIAVEGG 119 Query: 152 PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFH 211 + + KFG + L A L V SG+ +H+GSQ +++ Sbjct: 120 SAL----------WGLKHKFGCAPDEGVRLLREAVDLGLV-PSGLSVHVGSQQMDPDAWR 168 Query: 212 KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIH----- 261 +A L + + L G + H+++GGGL + PP +A+L Sbjct: 169 EACDRLAAVLEALGEAGITLDHVNLGGGLPARGYLSAAGEPLDPPLDKIFATLREGVERL 228 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVI--SIKKSADKTFVILDVAMNDFMRPTLYDA 319 + +++EPGR+LVAD G + +V+ + ++ D Sbjct: 229 RAVHGGHLDVVMEPGRWLVADHGTIHARVVRLTRRRMPDGVLQHWLYLSCGKFNGLYEMD 288 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR---KIA-LPRPGDLLYIEKTGAYG 375 + + A + GP C++ D A +R ++ R GD + I GAY Sbjct: 289 ALQYRLRFPTRSAAPRVPAVVAGPTCDSDDAFAHDRGHVRVPADLRSGDPVEILSCGAYA 348 Query: 376 AVQSGT-YNSRLLIPEIM 392 + +N +P ++ Sbjct: 349 LSYTTRGFNGFSPLPVVL 366 >gi|319782827|ref|YP_004142303.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168715|gb|ADV12253.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 406 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 64/381 (16%), Positives = 108/381 (28%), Gaps = 15/381 (3%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 EN LA P YC+ + + F F G YA+K N Q V+KTL Sbjct: 4 FENAREAALALRPDDPVYCFRPQVLMADARQFMGMFPG---KTAYAVKTNGEQIVLKTLV 60 Query: 73 HLGSG-LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G D+ S GE A AE + V D + I +++ E E+ Sbjct: 61 EAGVKAFDVASPGEFAAVRAVSPDAEMLYMHPVKAQSDIKLALEKYAIRVISLDHEDEIT 120 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 L + +L + V + H + KFG L + Sbjct: 121 KLTRVVRALDIDPG-SISVFVRVQTKGHA---AYELSKKFGAGPAYAVELAERLNRTGYK 176 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + A G ++ P Sbjct: 177 VGLCFHVGSQIEDPDTYERALASADWVRNRLTFDIAGLDVGGGFPAEYGHDPNRKQIEMP 236 Query: 252 SSSDYASLIH---QYFGNLQCKIILEPGRFLVADVGILVTKV---ISIKKSADKTFVILD 305 S S + + + Q ++ EPGR +VA L+ +V + + Sbjct: 237 SLGQIMSRLSGDLKEYQFDQMPLVAEPGRVIVARCLSLIVRVLLRKGKRLYINDGIWASL 296 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGD 364 + ++ + + G C++ D ++ + GD Sbjct: 297 SDSWTGKITLPARFIPDPAIRSRNGEEKNIVPFKVCGATCDSVDILSRPFWLPETVDTGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSR 385 + I GAY +N Sbjct: 357 WIEIGHIGAYSLSLRTRFNGF 377 >gi|313246908|emb|CBY35760.1| unnamed protein product [Oikopleura dioica] Length = 301 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 8/276 (2%) Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I RVNP++ A ST K KFG+P+ L I G+ HIGSQ Sbjct: 17 IGMRVNPNVGAGKIAMSSTAGKSSKFGLPMTGEFEDEVVKIILENSWIQGLHQHIGSQGI 76 Query: 206 QIESFHKAFKLLRDLTQQLRSN--GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 ++ + L L +++ I++IDVGGG+ Y SD+ + ++YA L+++ Sbjct: 77 SLDQLTLGVERLVALARKINELAGTKQIKYIDVGGGIPTDYESDNEKVAYAEYAKLVNER 136 Query: 264 FGN-LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 N + E GR LV I V+KV ++K D+ V+ N F+R Sbjct: 137 VPNLDEFNFHSEFGRSLVTKYAISVSKVETVKTWGDRITVLTHFGSNQFLREVYLPDTWF 196 Query: 323 INYIVNPAGDRLHI----HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 V + D+ GP+C GD++A R + +PGD + + G Y Sbjct: 197 HRMSVLDQNGDPKVSDLIEQDVGGPLCFQGDYLAKARALPKIKPGDYIVMHDIGGYTYAL 256 Query: 379 SGTYNSRLLIPEIMVNGSQ-FHIIRPRMTFQELIEL 413 +NS + S+ F+ + R + E + Sbjct: 257 YSRFNSIQAPAVYGYDASENFYEFKSRESHAETLSF 292 >gi|254458023|ref|ZP_05071450.1| carboxynorspermidine decarboxylase [Campylobacterales bacterium GD 1] gi|207085416|gb|EDZ62701.1| carboxynorspermidine decarboxylase [Campylobacterales bacterium GD 1] Length = 377 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 123/388 (31%), Gaps = 22/388 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP Y +EKN + + ALK + + + G Sbjct: 5 ENIKTPCYICEEELLEKNLKLLDHVQKESGAKIILALKGFAMWSTFPQVKEYLHGCTASG 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A + V + DE + S S+L + R + Sbjct: 65 LHEAKL---AFEKFGKEVHTYSPAYKDEDIDEIAQISDHVVFNSPSQLFKYSDRVKKINP 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I+ R+NP+ +A+ + + G + L + Sbjct: 122 DVSISLRINPEQSASPKDIYNPCGIYSRLGTTLANFDEEV-----LKHINGLNFHALCEQ 176 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 D++E AF+ ++ +++I+ GGG +H + +I Sbjct: 177 GADELEDVLVAFE------EKFSKYFKGLKYINFGGG----HHITKKGYDVEKLIKIIKD 226 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + + G+LV+ V+ I + + + + P + Sbjct: 227 FKSKYNVEVYLEPGEAIGWETGVLVSSVLDIVHNG--MDIAILDTSAEAHMPDTLAMPYR 284 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + G C GD + + + GD + E Y V++ T+ Sbjct: 285 ADVRDSGEALEKEFTYRFGGNTCLAGDIMGDYSFDKVLKIGDKVIFEDQIHYTFVKNTTF 344 Query: 383 NSRLLIP-EIMVNGSQFHIIRPRMTFQE 409 N L I +++ +++ Sbjct: 345 NGIKLPSLAIYRKDGTLEVVKE-FGYED 371 >gi|78214012|ref|YP_382791.1| diaminopimelate decarboxylase [Synechococcus sp. CC9605] gi|78198471|gb|ABB36236.1| possible diaminopimelate decarboxylase [Synechococcus sp. CC9605] Length = 402 Score = 103 bits (256), Expect = 7e-20, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 125/365 (34%), Gaps = 26/365 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PFY IE + + +AFD + Y+ K NS QA+ + G ++VS E Sbjct: 20 PFYLIDFDGIENSIMRLKSAFDADFKKVRLAYSFKTNSLQAITTFMHSKSMGAEVVSGQE 79 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L AL+ I F G K+ E A + + + + L + K Sbjct: 80 LEWALSDNFEPNNIYFDGPVKSKKEHKRAAELNVNIQVDSVQELIDLLEITSDPSKLKVG 139 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 K +FG+ + G+ SG+ +H GS I Sbjct: 140 ARL-----------SMPYKNKINSRFGLTRSEFKEAT-TIMKRTGISFSGLHLHSGSNIT 187 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 I + ++ D + I + P+ ++S I Sbjct: 188 NINQYRESIMSCIDCITETWHELSWIDFGGGFPANTALANESEELPTPEAFSSCIKSIIS 247 Query: 266 N-----LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 +++EPGR LV D G+L+ +V IKK D+ V+ + +N + Y Sbjct: 248 KKNLSLNNKTVVIEPGRCLVEDNGLLLARVEQIKKREDRNIVVTNAGLNLVKSM--HSWY 305 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA--LPRPGDLLYIEKTGAYGAVQ 378 H + ++ + ++ G C D I + R GD + I TG Y Sbjct: 306 HPVIFLRQEIDEEQSTPYEVYGCNCFESDLIIDELEGPPSDLRIGDWIAIGSTGGYDM-- 363 Query: 379 SGTYN 383 +N Sbjct: 364 -QNFN 367 >gi|15611089|ref|NP_222740.1| putative carboxynorspermidine decarboxylase [Helicobacter pylori J99] gi|4154520|gb|AAD05600.1| putative carboxynorspermidine decarboxylase [Helicobacter pylori J99] Length = 405 Score = 103 bits (256), Expect = 7e-20, Method: Composition-based stats. Identities = 67/405 (16%), Positives = 117/405 (28%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L + + + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 ++ILEPG + G L+ VI I D+ ILD + + M Sbjct: 241 I---KDFKERYHNTEVILEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y V+ D I + + GP C GDF+ + GD Sbjct: 297 LEMPYRPSILKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L + SQ I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPS-LAKIDSQGFKILKSFSYED 400 >gi|317011876|gb|ADU82484.1| carboxynorspermidine decarboxylase [Helicobacter pylori Lithuania75] Length = 405 Score = 103 bits (256), Expect = 7e-20, Method: Composition-based stats. Identities = 66/405 (16%), Positives = 119/405 (29%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGVKVLLALKGYAFWREFGILRQRLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L +++ + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSGFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVEKHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +Y ++ILEPG + G L+ VI I D+ ILD + + M Sbjct: 241 IRDFKERYHNI---EVILEPGEAIGWQCGFLIASVIDIV-KNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIH-----------ADIVGPICETGDFIALNRKIALPRPGD 364 L Y ++ D I + GP C GDF+ + GD Sbjct: 297 LEMPYRPSILKISVENDEELIEIEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQGFK-ILKNFSYED 400 >gi|262340848|ref|YP_003283703.1| arginine decarboxylase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272185|gb|ACY40093.1| arginine decarboxylase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 463 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 56/441 (12%), Positives = 121/441 (27%), Gaps = 31/441 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTM 54 F L + L L TP I +N F+ Sbjct: 19 EFSIKNNLLEFHGIPLMDLIQKYGTPLQFTYLPKISQNIKKARKWFEKAIYSNQYNNKYT 78 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 CY K++ V++ ++ ++ + V + Sbjct: 79 YCYCTKSSHFSFVLEEALKNNISIETSYAYDIEIVKNLYQKGKTNKNIEVICNGFKTKNY 138 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFGI 173 +++ N + + L+ I F I A+ + Sbjct: 139 IENISELINSGFYNTIPILDNSDELEKLNLTINFPFKLGIRIASEEEPKFEFYTSRLGIG 198 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 I P V++ + I + I + + L+ + Sbjct: 199 YKDIIVFYLNKIKNNPKVELKMLHFFINTGIKDTAYYWNELFKCLHIYAGLKKIAPELDI 258 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGILV 287 +++GGG I +++Q Q I E G + V + G ++ Sbjct: 259 LNIGGGFPIKTSMSFNYDYEYMANEIVYQIKKFCQEENVSDPHIYTEFGAYTVGESGGIL 318 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 K++S K+ D+ + + P + + + + + G C++ Sbjct: 319 YKILSQKRQNDREKWNMIDSSFMTTLPDTWAISRRFIMMAINRWNDCYERVFLGGLTCDS 378 Query: 348 GDFI-----ALNRKIALPRPGD--LLYIEKTGAYGAVQSG----TYNSRLLIPEIMVNGS 396 D+ + R + TGAY SG + +++N Sbjct: 379 DDYYNSEQHMNAIYLPCFRKKTPLYIGFFNTGAYQDTISGYGGVHHCLIPQPIHVLINHD 438 Query: 397 Q-----FHIIRPRMTFQELIE 412 + + I R +E+++ Sbjct: 439 EKNNLVYRIFRKSQRPEEILK 459 >gi|308062890|gb|ADO04777.1| carboxynorspermidine decarboxylase [Helicobacter pylori Sat464] Length = 405 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 68/407 (16%), Positives = 126/407 (30%), Gaps = 33/407 (8%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 + TP Y + +EKN V ALK + L +G Sbjct: 6 TIPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGL 65 Query: 84 GE--LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E L +++ + + A+ S + T R + Sbjct: 66 YEAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKN 125 Query: 142 KK--------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 K+ + R+NP + T + K + GI + ++ Sbjct: 126 KQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSEFE---KGVKEHGLERV 182 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 SG+ ++ + L + + + N+ ++ GGG I Sbjct: 183 SGLHF----HTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLI 238 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 +Y +++LEPG + G L+ VI I D+ ILD + + M Sbjct: 239 QTIKDFKERYRNI---EVVLEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSAHMP 294 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRP 362 L Y V+ D I + + GP C GDF+ + Sbjct: 295 DCLEMPYRPGILKVSVENDEELIEVERGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKR 354 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 GD + + Y V++ ++N L ++ F I ++++ Sbjct: 355 GDKIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQGFK-ILKNFSYED 400 >gi|291575309|gb|ADE10234.1| putative diaminopimelate decarboxylase [Actinoplanes liguriensis] Length = 406 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 66/409 (16%), Positives = 130/409 (31%), Gaps = 43/409 (10%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 G L V + ++A TP + T + + AF VC + K + Sbjct: 33 GDLTVGGVPVTRIAAAHGTPVHVIDETDVHSRCAEYVAAFG--PGAVCCSAKGGLLRGAA 90 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + +A G G S ELR AL A + E + G GK++ +++ AL G + Sbjct: 91 RWIARDGLGCYCRSAAELRTALDAGIRPESLALFGSGKSVADLEAALSCGAAVVIGSASE 150 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 + + ++ + + A + Sbjct: 151 AEVVAARSRPGQRVLLRVRPGSA--------------QRGYGVRLNSSAALAAVATVTRS 196 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 + ++G+D +G ++++ ++ + +LR+ +++GGG Sbjct: 197 RRLVLAGLDCSLGHRLNRFGTYESCLREAIGFVARLRTTVP---VLNLGGGHAADLPVGI 253 Query: 249 RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 A + + +G ++ + PGR L+ GI V +V++ D + Sbjct: 254 FAARLRAVAQVTSEGYGIEPPEVHVSPGRALLGRAGITVHRVVAA---GDGVIELDGDVP 310 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLY 367 + + I C GD ++ GDL+ Sbjct: 311 DCLPGADCAGLHTAALIGRASPAPGRSITVR-----C--GDATVAVAELPGDMAAGDLVA 363 Query: 368 IEKTGAYG-----AVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 + TGAY V + V G + + PR T ++ Sbjct: 364 LSGTGAYHQRRDVYV--------GRPAVVAVCGGRARTLLPRETIDRIL 404 >gi|91214945|ref|ZP_01251917.1| putative arginine decarboxylase [Psychroflexus torquis ATCC 700755] gi|91186550|gb|EAS72921.1| putative arginine decarboxylase [Psychroflexus torquis ATCC 700755] Length = 466 Score = 102 bits (255), Expect = 9e-20, Method: Composition-based stats. Identities = 51/443 (11%), Positives = 126/443 (28%), Gaps = 33/443 (7%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDTM-- 54 F+ L ++ L +L P + Y I +N F +A + + Sbjct: 18 DEFQLKNDHLTFHDIDLMELVEKYGAPLKFTY-LPKISENIHRAQKWFKDAIEKNNYRAT 76 Query: 55 --VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 CY K++ + V+ ++ S ++ + + + V + D Sbjct: 77 YNYCYCTKSSHFKHVLDEALKNDIHIETSSAFDIDIVNSLKERGKITKDTYVICNGFKRD 136 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKF 171 + + N ++ + ++ I I A+ + Sbjct: 137 QYVSNIANLINNGHQNCIPVIDNYEEIDLLTKAIDKDFKIGIRIASEEEPKFEFYTSRLG 196 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 + I V++ + I + I + + + +L+ ++ Sbjct: 197 IGYKNIIPFYEDQIKNNDQVELKMLHFFINTGIRDNAYYWNELQKCLRVYTRLKKVCPSL 256 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDY------ASLIHQYFGNLQCKIILEPGRFLVADVGI 285 +++GGG I L + I E G F V + G Sbjct: 257 DSLNIGGGFPIKNSLAFEYDYQYIIEEVVSQIKLTCEEEEVPVPHIFTEFGSFTVGESGG 316 Query: 286 LVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 + +V+ K+ D+ + + P + + + + + G C Sbjct: 317 AIYEVLYQKQQNDREKWNIINSSFITTLPDSWAISKRFIMLALNRWNDRYERVLLGGLTC 376 Query: 346 ETGDFI-----ALNRKIALPRPGD--LLYIEKTGAYGAVQSG----TYNSRLLIPEIMVN 394 ++ D+ + + + TGAY G + I++ Sbjct: 377 DSDDYYNSEQHVNAIYLPKYEKENPLYIGFFNTGAYQETIGGFGGLQHCLIPSPKHILIQ 436 Query: 395 GSQ-----FHIIRPRMTFQELIE 412 + + + ++L++ Sbjct: 437 KNDDGSLSTKLFSEQQKSEDLLK 459 >gi|332808532|ref|XP_524555.3| PREDICTED: arginine decarboxylase [Pan troglodytes] Length = 392 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 110/371 (29%), Gaps = 53/371 (14%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F Y +K NS+ V+K LA LG G ++ Sbjct: 41 FFVADLGAIVRKHFCFLKCLPR--VQPFYTVKCNSSPGVLKVLAQLGLGFSCANK----- 93 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + + S + + QR + + + Sbjct: 94 --------------------LCEAHSRRDCRSTVEETMGSAIWFVQQRGTACLIRMVLCI 133 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG+ + L A ++ GV HIGS + Sbjct: 134 --------ATDDSHSLSCLSLKFGVSLKSCRHLLENAKK-NHAEVVGVSFHIGSGCPDPQ 184 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 185 AYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEG 244 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 I E GR+ V + +I+ K S + + + F Sbjct: 245 CGVDIFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIF 304 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P+ ++ + + GP + D +A + GD L + Sbjct: 305 NSVLFDNICPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNM 364 Query: 372 GAYGAVQSGTY 382 GAY + Sbjct: 365 GAYTVGMGSPF 375 >gi|83778339|gb|ABC47117.1| ornithine decarboxylase [Fusarium solani] Length = 312 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 67/327 (20%), Positives = 117/327 (35%), Gaps = 35/327 (10%) Query: 39 KNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAER 98 + +L + YA+K N + +IK LA LG+G D S+ E+ + L+ + +R Sbjct: 1 RQHLRWKKNLPR--VRPFYAVKCNPDTQIIKLLAELGTGFDCASKAEIEQVLSLGLSPDR 58 Query: 99 IVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANT 158 I+++ KT + +G+ ++ EL + + I T Sbjct: 59 IIYAQPCKTNSYVRYVKTAGVKQMTFDNSDELYKIAKLYPGAELFLRIM----------T 108 Query: 159 HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLR 218 S + KFG + L A A L + + GV H+GS +F+KA + Sbjct: 109 DDSESMCRFSMKFGAAMETAEGLLALAKHLG-LNVIGVSFHVGSGASDPLAFYKAVRDAH 167 Query: 219 DLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRF 278 + QQ R G +++ +DVGGG + I+ EPGR+ Sbjct: 168 TVFQQARELGFDMRTLDVGGGFSGDTFETMAEVLREAL---DEFFPPGCGVDIMAEPGRY 224 Query: 279 LVADVGILVTK------VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 VA + V V ++ + ++D + I+ +G Sbjct: 225 YVATAFTIACNIIARRTVEDPTLDGKGYMVYVNDGVYGNFSNIVFDHQTPVAKILRASGK 284 Query: 333 RLHIH-------------ADIVGPICE 346 L+ I GP C+ Sbjct: 285 TLYETPSAHPVPTGEGVEYSIWGPTCD 311 >gi|260464329|ref|ZP_05812521.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075] gi|259029953|gb|EEW31237.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075] Length = 406 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 62/381 (16%), Positives = 106/381 (27%), Gaps = 15/381 (3%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 EN LA P YC+ ++ + F F G YA+K N Q V+KTL Sbjct: 4 FENAREAALALRPDDPVYCFRPQVLKADARQFMGMFPG---KTAYAVKTNGEQIVLKTLV 60 Query: 73 HLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G D+ S GE A AE + V D + I +++ E E+ Sbjct: 61 EAGVTAFDVASPGEFSAVRAVSPDAEMLYMHPVKAQSDIKLALEKYAIRVISLDHEDEIT 120 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 L + +L + + KFG L + Sbjct: 121 KLTRVVRALDIDPGAISVFVRIQTKGSAAY----ELSKKFGAGPAYAVELAERLNRTGYK 176 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + A G ++ P Sbjct: 177 VGLCFHVGSQIEDPDTYERALASADWVRNRLTFDIAGLDVGGGFPAEYGHDPNRKQIEMP 236 Query: 252 SSSDYASLIH---QYFGNLQCKIILEPGRFLVADVGILVTKV---ISIKKSADKTFVILD 305 S S + + + Q ++ EPGR +VA L+ +V + + Sbjct: 237 SLGQIMSRLSGDLKEYQFDQIPLVAEPGRVIVARCLSLIVRVLLRKGKRLYINDGIWASL 296 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGD 364 + ++ + + G C++ D ++ + GD Sbjct: 297 SDSWTGKITLPARFIPDPAIRSRNGEEKNIVPFKVCGATCDSVDILSRPFWLPETVDTGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSR 385 + I GAY +N Sbjct: 357 WIEIGHIGAYSLSLRTRFNGF 377 >gi|238927649|ref|ZP_04659409.1| diaminopimelate decarboxylase [Selenomonas flueggei ATCC 43531] gi|238884574|gb|EEQ48212.1| diaminopimelate decarboxylase [Selenomonas flueggei ATCC 43531] Length = 347 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 83/252 (32%), Gaps = 6/252 (2%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLGSGL 78 +L TPF+ Y I N+ F +A+KA N +++ L G+G Sbjct: 27 RLIERYPTPFHLYDEAKIRANFRRLRETFAWAPSFREHFAVKALPNPRIVQILHEDGAGT 86 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S EL + AA V E I+ + +E A++ G + + Sbjct: 87 DCSSTPELIISAAAGVKGEEIMLTSNDTPYEEFQKAIELGAVINLDDLSHLDYMAEHAGL 146 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 I E K+G+ Q+ Y A + + M Sbjct: 147 PNLLCFRYNPGNLV-----EGNDIIGKPVEAKYGLTREQMFEGYRRALEMGVKRFGVHTM 201 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 I +++ A + + G +++ +++GGG GI Y + + Sbjct: 202 VISAELRTEAFLLTARLMFELAAELKEKLGIHVEFVNLGGGFGIPYRPEQDGIDYDAVGA 261 Query: 259 LIHQYFGNLQCK 270 I + + + Sbjct: 262 GIERLYNEIMRP 273 >gi|51596221|ref|YP_070412.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP 32953] gi|186895248|ref|YP_001872360.1| Orn/DAP/Arg decarboxylase 2 [Yersinia pseudotuberculosis PB1/+] gi|51589503|emb|CAH21127.1| possible diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP 32953] gi|186698274|gb|ACC88903.1| Orn/DAP/Arg decarboxylase 2 [Yersinia pseudotuberculosis PB1/+] Length = 388 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 79/377 (20%), Positives = 135/377 (35%), Gaps = 24/377 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL--KANSNQAVIKTLAHLGSGLDIVSEGEL 86 Y A+ + F +D V +A K+N+ +V + + G ++VS EL Sbjct: 18 VYILDLDAMTQFVREFRGIWDKQFPHVIFAYSFKSNNIASVTQLMFREGFSAEVVSLHEL 77 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + A+ I F G K +EI+ A S ++ +E++ + A + + I Sbjct: 78 KLAINDGFFGTNIFFDGPVKLDNEIEFA-LSNNVNIQCDNITEIERVLALAANTNAEPHI 136 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + R++ D + K E I + H + + I ++ Sbjct: 137 SLRLSSDYRGQGLSRFGMDKDEWNEAIALLTTHGILCNGIHVHSGSNLSSCQGIVDTLES 196 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY--- 263 + A K + ID+GGG + Y+ I Sbjct: 197 FQDEIGALKNHL-------------RFIDIGGGYPASTCGSDTASILEQYSVKIALQLRR 243 Query: 264 --FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + +ILEPGR L D G LVT+++ K T VI +R Y + Sbjct: 244 LGIDFHKTPLILEPGRALTEDFGYLVTRIVFAKCR-YSTNVITTAVPGTNIRSAQYHNHR 302 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSG 380 ++ I + H AD+ G C D IA N + D + I GAY + S Sbjct: 303 KVLIIPERPVNCEHSVADVYGSNCYENDIIAKNVPVPFDLSLDDKIAIFSCGAYDIMNSS 362 Query: 381 TYNSRLLIPEIMVNGSQ 397 + R P I+++ + Sbjct: 363 DWI-RKRPPIIVISNGK 378 >gi|312885171|ref|ZP_07744851.1| carboxynorspermidine decarboxylase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367184|gb|EFP94756.1| carboxynorspermidine decarboxylase [Vibrio caribbenthicus ATCC BAA-2122] Length = 376 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 56/377 (14%), Positives = 121/377 (32%), Gaps = 25/377 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 +TPF+ + +N + D + ALK S V + G Sbjct: 5 EFKTPFFMIDENKLIENLKIAQHLKDISGAKLVLALKCFSTWGVFDIIKPYLDGTTSSGP 64 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E++ E +S D ++ FN +S+ + + + Sbjct: 65 FEVKLGYETFGK-ETHAYSVGYSKEDVEAVSTYCDKLIFNSQSQLQAYRH-----LVKEG 118 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 I R+NP ++ + P Q L + L + +D + Sbjct: 119 TSIGLRLNPGVSHASQD----------LADPARQFSRLGVHQEQLLSESFNCIDGAMFHM 168 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + +LL +++ + ++ + +GGG+ + + + Sbjct: 169 NCENKDAGSFSQLLEQISENFGEYLNQLKWVSLGGGIFFTWPG----YDIQTLGKSLRDF 224 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG ++ + LV V+ I ++ +T ++ + +Y+ E Sbjct: 225 AKRHGVQVYLEPGEAIITETTDLVVTVVDIVENGMRTAIVDSATEAHRLDTLIYN---EP 281 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 ++ + D H I C GD + R G L+I+ + Y V+ +N Sbjct: 282 ASVLEASNDGEHQ-YVIGSCSCLAGDQFCIARFDKPLEIGQRLHIQDSAGYTMVKLNWFN 340 Query: 384 SRLLIPEIMVN-GSQFH 399 + + Sbjct: 341 GLRMPSIYCRRSNGEVR 357 >gi|322378891|ref|ZP_08053308.1| carboxynorspermidine decarboxylase (NspC) [Helicobacter suis HS1] gi|322380383|ref|ZP_08054589.1| carboxynorspermidine decarboxylase [Helicobacter suis HS5] gi|321147173|gb|EFX41867.1| carboxynorspermidine decarboxylase [Helicobacter suis HS5] gi|321148701|gb|EFX43184.1| carboxynorspermidine decarboxylase (NspC) [Helicobacter suis HS1] Length = 408 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 57/387 (14%), Positives = 110/387 (28%), Gaps = 12/387 (3%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 +P Y +++N + ALK + + L G E Sbjct: 15 PSPCYVLELAKLQRNLAILERVQKEAGVKIVLALKGFAFWRSFEWLRVSLHGCCASGVYE 74 Query: 86 ----LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 + E VFS K +D L + FN ++ A + Sbjct: 75 ALLAYEEFGSRESGKEICVFSPGFKEVDIKQLLPIATHIIFNSFAQYHAYKDLILAKNKQ 134 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + N + A+ L + GV + Sbjct: 135 LSKLGLSSIKIGLRINPLFSRVQPLIYNPCAPHSRLGIPPKAFKEGLERYGLEGVS-GLH 193 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + L + + +Q +++GGG ++ L Sbjct: 194 FHTHCQQDASDLQEGLDHVKKHFGETLAQVQWLNMGGGQHMSKEGYALEVLIQAIQQLKK 253 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 Y + EPG + G L++ V+ I ++ + ++ N Sbjct: 254 DYPNLAEIFC--EPGEAVGYQTGFLLSSVLDIVENGAQIAILDVSITNHMPDCLEMPYKP 311 Query: 322 EINYIV-----NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 EI + + + G C GDFI + GD + E Y Sbjct: 312 EIFKVALDGSVQVGSEAGEFGYFLGGVSCLAGDFIGPYYFENPLQVGDRIIFEDMLHYTI 371 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRP 403 V++ T+N L ++ +QF +++ Sbjct: 372 VKNNTFNGIALPSLGLIEHNQFKLLKK 398 >gi|325103507|ref|YP_004273161.1| Orn/DAP/Arg decarboxylase 2 [Pedobacter saltans DSM 12145] gi|324972355|gb|ADY51339.1| Orn/DAP/Arg decarboxylase 2 [Pedobacter saltans DSM 12145] Length = 463 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 59/423 (13%), Positives = 131/423 (30%), Gaps = 28/423 (6%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDT----M 54 F + L+ +++L ++ TP + Y I K F A D Sbjct: 19 FDIIDDELYFHDLNLMEMIETYGTPLRFTY-LPLISKKIQQAKILFQTAILNNDYRGTYK 77 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 CY K++ + +++ L+ S ++ V + Sbjct: 78 YCYCTKSSHFRHIVEEALKNDIHLETSSAFDMPMIDTLEKKGNVTKDITVICNGFKTFQY 137 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN---ANTHKKISTGKKEDKF 171 Q I + ++ + L+ + I ++ A+ + S Sbjct: 138 KQYIIDMLHDGFKNIIPVLDNKEEFNLYDDEIEMDTPCNLGIRVASEEQPNSQFYTSRLG 197 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 I + S P ++ + I S I + + L + + + Sbjct: 198 IRQEDVIDFYNSKISKNPNFRVKLLHFFINSGISDTPYYWNELEKYVTLYCKFKKVNPEL 257 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ------YFGNLQCKIILEPGRFLVADVGI 285 +D+GGG+ ++ + ++ II E G++ VA+ Sbjct: 258 DTLDIGGGMPFKDSLVFDFDYEYMINEIVKRIKQICAAHDVMEPDIITEFGKYTVAEASG 317 Query: 286 LVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 ++ KV+ K+ D+ ++ P ++ + + D + ++ G C Sbjct: 318 ILYKVLGRKQQNDREKWLMLDGSFITNLPDVWALNQKYILLPINNWDSEYEKVNLGGITC 377 Query: 346 ETGDFIAL-----NRKIALPRPGDLLYIEKTGAYGAVQSG----TYNSRLLIPEIMVNGS 396 + D+ + N + R L TGAY V SG + +++ + Sbjct: 378 DGQDYYSQEAHMNNVFMPKTRKVQYLGFFHTGAYQEVLSGYGGIHHCLLPSPKHVLIRRN 437 Query: 397 QFH 399 + Sbjct: 438 RDE 440 >gi|298711197|emb|CBJ32419.1| conserved unknown protein [Ectocarpus siliculosus] Length = 224 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 49/156 (31%), Positives = 72/156 (46%), Gaps = 14/156 (8%) Query: 273 LEPGRFLVADVGILVTKVIS--IKKSADKTFVILDVAMNDFMRPTLYDAYHEINY-IVNP 329 +EPG FLVA+ G LV S F+ LD M + +RP+LY A H I Sbjct: 62 IEPGIFLVANAGSLVCTAQDLVSTGSGGYEFIKLDAGMTELLRPSLYGALHPIVVVPAEG 121 Query: 330 AGDRLHIHADIVGPICETGDFIA---------LNRKIALPRPGDLLYIEKTGAYGAVQSG 380 G +VG CE+GD + R +A GDL+ +E GAY A S Sbjct: 122 EGGGEIAEYVVVGHCCESGDLLTPVSGAASEIERRTLAKAEIGDLVVVEGCGAYVAGMSA 181 Query: 381 -TYNSRLLIPEIMVNG-SQFHIIRPRMTFQELIELD 414 YNS PE++++ + H++ R T +++ E + Sbjct: 182 KNYNSFPEAPEVLLDSAGELHVVWRRQTLEQIFENE 217 >gi|84386911|ref|ZP_00989935.1| Orn/DAP/Arg decarboxylase, family 2 [Vibrio splendidus 12B01] gi|84378201|gb|EAP95060.1| Orn/DAP/Arg decarboxylase, family 2 [Vibrio splendidus 12B01] Length = 404 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 79/409 (19%), Positives = 138/409 (33%), Gaps = 30/409 (7%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLG 75 L +L + FY ++ E NY F AF T + Y+ K N + K + G Sbjct: 6 LNELDSLHGDSFYLLDSSKFEDNYDEFLLAFKKYYSKTNIGYSYKTNYTPKLCKIVDRKG 65 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 ++VS+ E AL V AE IV +G K + + A+ G Sbjct: 66 GYAEVVSDMEYALALKLSVRAENIVVNGPYKPVKFLKEAIFGGSIVNLDSYTEIELVKEL 125 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + K+ + R N DI +FGI + + + Sbjct: 126 AQDNPDKQLKVGIRCNFDIG---------NDVVSRFGIDVEDSTFFEQFKLINEIANLEV 176 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG-------------I 242 V I + + + + + ++IDVGGG Sbjct: 177 V--GIHCHFPDRNAPSYKVRAEKIIALSDKLFKTPPKYIDVGGGYFGKMPDALKGQFSSY 234 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 + ++ +S +A + Q +ILEPG +V D V+K+I IK K Sbjct: 235 HEYDEYAENIASQFAKRYGDLPESEQPTLILEPGSAIVGDTVKFVSKIIDIKSVRGKFIA 294 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 + + + + I G+ I DI G C D++ L + Sbjct: 295 MSSGSKFNIGLLSS-SVNMPIEVFSKEQGEYF-IDIDISGFTCIESDYLYKGYNGPLSK- 351 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELI 411 D + + G+Y V + P + + F I++ + T +++ Sbjct: 352 DDYVVLSNVGSYSIVFKPPFI-LPNFPVLEMAEQSFEIVKRKETVEDIF 399 >gi|304380085|ref|ZP_07362806.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304341321|gb|EFM07239.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 333 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 77/323 (23%), Positives = 125/323 (38%), Gaps = 14/323 (4%) Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 ++ S+GE+ + L PA I+F G GKT +E+ A+ G+ +VES EL+ LN Sbjct: 1 FEVASQGEIAKGL-VFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAIL 59 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 K I RVN + + + +FGI ++ + A +P + + G Sbjct: 60 EDEDKTQHILLRVNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFH 118 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H S KL + + ++HI++GGG+G+ Y ++ Sbjct: 119 FHSISNNLDSNLHVDVVKLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNF 178 Query: 257 ASLIHQYFGNLQCKII---LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + + E GRF+VA +G VT+V+ IKK + IL F Sbjct: 179 VENFKTLIVEQEMEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRL 238 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADI-------VGPICETGDFIALNRKIALPRPGDLL 366 P + H + I VG +C D A +I GD++ Sbjct: 239 PVSWQHNHPFDIYRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREIQIEAISTGDVI 298 Query: 367 YIEKTGAYGAVQSGT-YNSRLLI 388 + GAYG S + S Sbjct: 299 VFKYAGAYGWSISHHDFLSHPHP 321 >gi|125581938|gb|EAZ22869.1| hypothetical protein OsJ_06556 [Oryza sativa Japonica Group] Length = 200 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 7/196 (3%) Query: 9 GSLHAENVSLEKL---AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQ 65 G L+ E V +E A TPFY YS + +N+ + +A +G+ ++V YA+KAN+N Sbjct: 2 GHLYCEGVRVEDAMGAAER--TPFYLYSKPQVVRNFTAYRDALEGLRSIVGYAVKANNNL 59 Query: 66 AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 V++ L LG G +VS ELR AL A R +F+G GKT++++ LA +SG N++ Sbjct: 60 RVLQLLRELGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKTLEDLVLAAESG-VFVNID 118 Query: 126 SESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 SE +L+ + A GKK P+ R+NPD++ H ++TG K KFGI ++ Sbjct: 119 SEFDLENIVTAARVAGKKVPVLLRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSI 178 Query: 186 S-TLPGVKISGVDMHI 200 + + GV H+ Sbjct: 179 KSYSNDITLVGVHCHL 194 >gi|317179814|dbj|BAJ57600.1| carboxynorspermidine decarboxylase [Helicobacter pylori F32] Length = 405 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 64/405 (15%), Positives = 121/405 (29%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L +++ + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI + Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGIVPSEFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +Y +++LEPG + G L+ VI I D+ ILD + + M Sbjct: 241 IKDFKERYHNI---EVVLEPGEAIGWQCGFLIASVIDIV-QNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y ++ D + + + GP C GDF+ + GD Sbjct: 297 LEMPYRPSILKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFK-ILKNFSYED 400 >gi|300023366|ref|YP_003755977.1| Orn/DAP/Arg decarboxylase 2 [Hyphomicrobium denitrificans ATCC 51888] gi|299525187|gb|ADJ23656.1| Orn/DAP/Arg decarboxylase 2 [Hyphomicrobium denitrificans ATCC 51888] Length = 392 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 74/350 (21%), Positives = 125/350 (35%), Gaps = 20/350 (5%) Query: 39 KNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG---LDIVSEGELRRALAAPVP 95 + F N F G V YA KANS+ ++ L G+G D+ S EL A A +P Sbjct: 30 RAARWFINNFPG---EVAYAYKANSSVFLVGAL--YGAGITQFDVASVAELEDA--ATIP 82 Query: 96 AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN 155 R+ F K+ I A F+ + + + ++ A + + Sbjct: 83 GVRLHFMHPVKSRYAIRRA------YFDYDIKCFALDTEDELQKIVEETDGAKDLELFVR 136 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFK 215 + K S E KFG I + T G+ H+GSQ +++ AF+ Sbjct: 137 ISVPAKNSRVPLEHKFG--ITGQKAQRLLVKTRQVADELGITFHVGSQTTTPDAYAMAFE 194 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEP 275 ++ + I S + + C++I EP Sbjct: 195 EVKKHIVKAGVVVDAIDIGGGFPSRYTDSVPARLSDFIEVIKSSMDKMPVTEHCRLICEP 254 Query: 276 GRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH 335 GR LVA+ L+ KV ++KS ++ F+ F + + + Sbjct: 255 GRALVAEAESLIVKV-DLRKSGNQLFINDGGYGALFDSAHIGFVFPVRLIRPGLDPNEPL 313 Query: 336 IHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNS 384 ++ GP C++ D + + R GD + I GAYG + +N Sbjct: 314 EPFELWGPTCDSIDRMKGPFMLPASVREGDYIEIGNIGAYGRALATRFNG 363 >gi|18652917|dbj|BAB84695.1| antizyme inhibitor [Danio rerio] Length = 419 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 119/363 (32%), Gaps = 34/363 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F A+ + ++ + Y + NS+ VI+ L+ LG G ++ E Sbjct: 40 FVVADLGALMRQHVAWKTTMPL--VRPFYPVSCNSSPVVIELLSALGVGFVCANKAETTL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ VP E I+ SGV K + I A ++GI E+E+EL+ + + ++ Sbjct: 98 VLSHDVPPENIILSGVCKQLSLIKHAAKTGINFLLCENEAELRKIARAHPEAKLLLQVS- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + + G + L A L ++GV + + + Sbjct: 157 -----------TEAQIEEASVTIGCSLKGCRHLLELAKELNVS-VAGVTFQVPASCKDPQ 204 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A R + + G ++ +D+GGG + + S L + Sbjct: 205 AYTHALSDARCIFDMGKELGFDMNILDIGGGFSGSEFQLKQVHSVIR-PLLEAYFPSESG 263 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH------- 321 II EPG F V L VI K + + P + Sbjct: 264 VSIIAEPGNFFVFSCFTLAVNVIGKKAAYRDLHTSTHDKLTSSEAPEFVYYMNDGVYGSF 323 Query: 322 -----------EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + ++ D + + GP C+ D + + GD L Sbjct: 324 MGRLFGNIISTPSVHKMSLTLDEPVFSSSLWGPSCDPLDQVVERCLLPELAVGDWLVFIN 383 Query: 371 TGA 373 GA Sbjct: 384 MGA 386 >gi|261838891|gb|ACX98656.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori 52] Length = 405 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 65/405 (16%), Positives = 119/405 (29%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L +++ + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSGFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +Y +++LEPG + G L+ VI I D+ ILD + + M Sbjct: 241 IKDFKERYHNI---EVVLEPGEAIGWQCGFLIASVIDIV-KNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIH-----------ADIVGPICETGDFIALNRKIALPRPGD 364 L Y ++ D I + GP C GDF+ + GD Sbjct: 297 LEMPYRPSILKISVENDEELIEIEKGENQGAFSYFLGGPTCLAGDFMGSFSFDVPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFK-ILKNFSYED 400 >gi|269104270|ref|ZP_06156966.1| carboxynorspermidine decarboxylase putative [Photobacterium damselae subsp. damselae CIP 102761] gi|268160910|gb|EEZ39407.1| carboxynorspermidine decarboxylase putative [Photobacterium damselae subsp. damselae CIP 102761] Length = 374 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 69/380 (18%), Positives = 126/380 (33%), Gaps = 26/380 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP++ A+ KN + + ALK S V T+ G S Sbjct: 2 KQLATPYFMIDEAALLKNLERIAQLKALSGAKMVLALKCFSTWGVFDTMKPYLDG--TTS 59 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 G L L A VG + +I+ N + L L Sbjct: 60 SGPLEVRLGAETFGGETHGYSVGYSQQDIEAINP----FVNKLIFNSLSQLENLRKYAAD 115 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I R NP I+ + ++ + G+ + + L + GV+ + Sbjct: 116 GISIGVRFNPGISYANQDLANPARQYSRLGVSVDK----------LSSQALVGVEGGMFH 165 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + +F ++L ++QQ N+ + +GGG+ + ASL+ Sbjct: 166 MNCENSNFPAYKRILETISQQFGPYLDNLNWVSLGGGVSFTSDG----YPLEELASLLKW 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +I LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 222 FSDKHGVQIYLEPGEAVITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYNESGT 281 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I I C GD + + + GD L++ +G Y V+ + Sbjct: 282 IREASLDGD----YEYIIGSCSCLAGDVFCVAKFDQPLQIGDRLHVMDSGGYTMVKLNWF 337 Query: 383 NSRLLIPEIM--VNGSQFHI 400 N + V+G + Sbjct: 338 NGLKMPSIYCRRVDGEIIQL 357 >gi|299142703|ref|ZP_07035833.1| carboxynorspermidine decarboxylase [Prevotella oris C735] gi|298575918|gb|EFI47794.1| carboxynorspermidine decarboxylase [Prevotella oris C735] Length = 365 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 107/371 (28%), Gaps = 21/371 (5%) Query: 37 IEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA 96 + +N +N D + A KA + S E R A Sbjct: 1 MRRNLNLIANVAREADVEIILAFKAYALWKTFPIFREYIHATTASSLSEARLA--LEEFG 58 Query: 97 ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA 156 + T DEID + S ++ ++R + RVNP+ + Sbjct: 59 SKAHTFSPAYTDDEIDEIARC-SSHLQFNSLTQYARYHERVRKVNPTISYGLRVNPEYSE 117 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL 216 + +FGI ++ + + Sbjct: 118 VGTDLYNPCAPGTRFGISADKMPEMLPDDI-----------EGFHCHCHCESGADVFERT 166 Query: 217 LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPG 276 L+ + + ++ I+ GGG + H + K+ILEPG Sbjct: 167 LKHIENKFSRWFPQLKWINFGGGHLMTRHDYDTLLLVDTL---QKFHMRYPWLKVILEPG 223 Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNP---AGDR 333 G LV++V+ + + IL+V+ M L Y+ + Sbjct: 224 SAFAWQTGPLVSQVVDVVEDHGIKTAILNVSFTCHMPDCLEMPYNPVVRGSKYIEADDKS 283 Query: 334 LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + G C +GDF+ + G+ + E Y V++ +N + Sbjct: 284 SPYIYRLGGNSCLSGDFMGYWKFDHALLVGENVIFEDMLHYTTVKTNMFNGISHPAIGLA 343 Query: 394 N-GSQFHIIRP 403 ++R Sbjct: 344 KLDGTLEVLRK 354 >gi|325270905|ref|ZP_08137492.1| carboxynorspermidine decarboxylase [Prevotella multiformis DSM 16608] gi|324986702|gb|EGC18698.1| carboxynorspermidine decarboxylase [Prevotella multiformis DSM 16608] Length = 388 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 59/387 (15%), Positives = 117/387 (30%), Gaps = 23/387 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + N + + + A KA + S E R Sbjct: 14 PMYILEEKRLRDNLKLIARVAEEAGVEIILAFKAYALWRTFPIFREYIRATTASSLYEAR 73 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 FS + ++A S FN ++ E + R + + Sbjct: 74 LGFEEFGAP-THTFSPGYTDYEIDEIARCSSHLVFNSLTQYERYHVRARMGNERL--SLG 130 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RVNP+ + + +FGI + G +H + Sbjct: 131 LRVNPEYSEVETLIYNPCAPGTRFGITS-------EKLPDRLPDDVDGFHVHCHCESGSD 183 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ + ++ I+ GGG + +Y Sbjct: 184 VFERTLTRIEG----RFARWFPQLKWINFGGGHLMTRKDYDVQRLIRTLRGFKERYPWI- 238 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 K+ILEPG G LV +V+ + + IL+V+ + M L YH Sbjct: 239 --KVILEPGSAFAWQTGPLVAQVVDVVEDHGIKTAILNVSFSCHMPDCLEMPYHPAIRNA 296 Query: 328 NPAGD----RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 A + R + C +GD++ + G+ + E Y V++ +N Sbjct: 297 RLADEDGSARGEHTYRMGANSCLSGDWMGSWTFDHALQTGENIIFEDMLHYTTVKTTMFN 356 Query: 384 SRLLIPEIMVN-GSQFHIIRPRMTFQE 409 +++ ++ ++R ++++ Sbjct: 357 GISHPAIALLHVDNELEMLRE-YSYED 382 >gi|304321189|ref|YP_003854832.1| diaminopimelate/ornithine decarboxylase [Parvularcula bermudensis HTCC2503] gi|303300091|gb|ADM09690.1| diaminopimelate/ornithine decarboxylase [Parvularcula bermudensis HTCC2503] Length = 392 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 62/348 (17%), Positives = 111/348 (31%), Gaps = 17/348 (4%) Query: 39 KNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIVSEGELRRALAAPVPAE 97 + + A V YA+KAN + V++ LA G D+ S E+R + Sbjct: 29 QRAARWFAA--QFRGTVFYAVKANPDPIVLEALASGGVDRFDVASLAEIRAVRRQFPSST 86 Query: 98 RIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINAN 157 + V + + G+ F ++ + E L++ + + V ++ + Sbjct: 87 LAFMNPVKAPEAIAEAYFRHGVRIFALDRQEE---LDKIVTATKGAGDLTLIVRIGVDNS 143 Query: 158 THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 T K + I + +A L GV HIGSQ E+F +A + Sbjct: 144 TADLKLGMKFGARGPAVADLIRTTRWHAEKL------GVSFHIGSQNRAPEAFVQAMTSV 197 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGR 277 Q + ++ + + EPGR Sbjct: 198 AGQVQAAGVLLDILDVGGGFPAAYPGRDHAALSDYIEAIHRAFDRFPAFGRTALWAEPGR 257 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH 337 LVA+ L+ +V + + A+ D V D + Sbjct: 258 ALVAEAASLIVRVEGRRDFDLYINDGIYGALYDAGHLNWRFPC----RAVGHPADAMTAP 313 Query: 338 ADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNS 384 GP C+ D++ + GD + I + GAYG + +N Sbjct: 314 FRFYGPTCDDADYMEGPFFLPAGMAQGDTIEIGQLGAYGRTMTSGFNG 361 >gi|46204601|ref|ZP_00049755.2| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 201 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 4/139 (2%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF--MRPTLYDAYHEINYIV 327 +++LEP R+L G+ + +V+++K+S FVI D M+ L + Sbjct: 61 RLVLEPVRYLAGPAGLYLARVLAVKESRGSRFVITDGGMHHHLAASGNLGQIVKRDFPLA 120 Query: 328 NPAGDRLHIHAD-IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSR 385 A +VGP+C D +A + GDL+ + ++GAYG S T + S Sbjct: 121 AVVDAGSECTATAVVGPLCTPLDMLARAAPLPPLAEGDLVAVLQSGAYGLTASPTGFLSH 180 Query: 386 LLIPEIMVNGSQFHIIRPR 404 + E++V G + +IR R Sbjct: 181 PMPAELLVEGGEAELIRAR 199 >gi|188526831|ref|YP_001909518.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori Shi470] gi|188143071|gb|ACD47488.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori Shi470] Length = 405 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 64/405 (15%), Positives = 121/405 (29%), Gaps = 33/405 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 --LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 L +++ + + A+ S + T R + K+ Sbjct: 68 AKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSVIFNSFYQYATYKDRILDKNKQ 127 Query: 144 --------APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + R+NP + T + K + GI + Sbjct: 128 LENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSEFEKGVKEHGLEGV----- 182 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + ++ + L + + + N+ ++ GGG I Sbjct: 183 --SGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQT 240 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 +Y +++LEPG + G L+ VI I D+ ILD + + M Sbjct: 241 IKDFKERYRNI---EVVLEPGEAIGWQCGFLIASVIDIV-KNDQEIAILDASFSAHMPDC 296 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGD 364 L Y ++ D + + + GP C GDF+ + GD Sbjct: 297 LEMPYRPSILKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGD 356 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + Y V++ ++N L ++ F I ++++ Sbjct: 357 KIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFK-ILKNFSYED 400 >gi|332185823|ref|ZP_08387570.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Sphingomonas sp. S17] gi|332014181|gb|EGI56239.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Sphingomonas sp. S17] Length = 411 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 100/339 (29%), Gaps = 14/339 (4%) Query: 49 DGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKT 107 + YA+KAN + +I+ L G D S E+R + A V Sbjct: 53 EKFPGRPMYAVKANPSPDLIQILWDNGITHFDTASIAEVRLVKSVAPQAVCCFMHPVKSE 112 Query: 108 IDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK 167 + G+ ++++S EL+ + + A Sbjct: 113 EAIAEAYFTHGVRTYSLDSMEELEKIVRATQGATDLTLCVRMRVSSEYAK-------LSL 165 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 KFG+ + S +T G+ H+GSQ +++ A + +R Sbjct: 166 GSKFGVSL--EESKDLLIATRQVADALGICFHVGSQTMTPDAYSAAMERVRAAIVAAAVT 223 Query: 228 GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 I + ++ EPGR L A+ Sbjct: 224 VDVIDVGGGFPSAYPGMTPPPLERFFETIHRAFESLPVSYSAELWAEPGRALCAEYS--- 280 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 + V+ +++ I D A + + + P D + GP C+ Sbjct: 281 SVVVRVERRRGNELYINDGAYGALFDAAHIGWKYPVQLLREPDSDARDMDFSFWGPTCDD 340 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 DF+ + GD I GAYG +N Sbjct: 341 LDFMQGPFPLPADTNTGDYFEIGMLGAYGQAMRTQFNGF 379 >gi|29561807|emb|CAD87803.1| antizyme inhibitor 1 [Danio rerio] Length = 436 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 119/363 (32%), Gaps = 34/363 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F A+ + ++ + Y + NS+ VI+ L+ LG G ++ E Sbjct: 40 FVVADLGALMRQHVVWKTTMPL--VRPFYPVSCNSSPVVIELLSALGVGFVCANKAETTL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ VP E I+ SGV K + I A ++GI E+E+EL+ + + ++ Sbjct: 98 VLSHDVPPENIILSGVCKQLSLIKHAAKTGINFLLCENEAELRKIARAHPEAKLLLQVS- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + + G + L A L ++GV + + + Sbjct: 157 -----------TEAQIEEASVTIGCSLKGCRHLLELAKELNVS-VAGVTFQVPASCKDPQ 204 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A R + + G ++ +D+GGG + + S L + Sbjct: 205 AYTHALSDARCIFDMGKELGFDMNILDIGGGFSGSEFQLKQVHSVIR-PLLEAYFPSESG 263 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH------- 321 II EPG F V L VI K + + P + Sbjct: 264 VSIIAEPGNFFVFSCFTLAVNVIGKKAAYRNLHTSTHDKLTSSDAPEFVYYMNDGVYGSF 323 Query: 322 -----------EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + ++ D + + GP C+ D + + GD L Sbjct: 324 MGRLFGNIISTPSVHKMSLTLDEPVFSSSLWGPSCDPLDQVVERCLLPELAVGDWLVFSN 383 Query: 371 TGA 373 GA Sbjct: 384 MGA 386 >gi|294937194|ref|XP_002782005.1| Ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983] gi|239893218|gb|EER13800.1| Ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983] Length = 460 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 70/444 (15%), Positives = 129/444 (29%), Gaps = 84/444 (18%) Query: 17 SLEKLAHV----VQTP---FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK 69 L+ +A + P +E+ + + + YA+K N ++K Sbjct: 26 PLQYVAEEALRDLGNPDISVMLLDLDQLERQMKKWKELLPRI--IPYYAMKCNPEPMLVK 83 Query: 70 TLAHLGSGLDIVSEGELR--------------RALAAPVPAERIVFSGVGKTIDEIDLAL 115 TL HLG D + E++ + + A IV++ K + A Sbjct: 84 TLYHLGCRFDCATINEMKLVKSILSENMGGSNAHIIDEMMASHIVYANPNKLPSHLIGAR 143 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 G+ C +S E+ + + +A + KFG + Sbjct: 144 DLGVECIVADSAFEIAKIAHYHPTAKLLLRLAC----------VDNNAQCPMSSKFGASL 193 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 ++ + G+ + GV H+GS + S KA R++ S I Sbjct: 194 GVAVNVLLEEAVNHGLNVVGVSFHVGSGCSDVHSITKALVDAREVFDAAASRYGMKLSIL 253 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQ-----YFGNLQCKIILEPGRFLVADVGILVTKV 290 GG + P + A++++ + + ++I EPGRF L+TK+ Sbjct: 254 DIGGGFQGVDREGSPLNFKSMATVVNSLLDTLFPDPDEVRVIAEPGRFFACSPCALLTKI 313 Query: 291 ISIK-------------KSADKTFVILDVAMNDFMRPTL------------------YDA 319 S +D + Y + Sbjct: 314 YSKNVVVSAAKLPEVKSCGGISDEDTMDGGSSSSASVDEGGAKNLSSLTRLYLNDGVYGS 373 Query: 320 YHEINYIVNPAGDRLHI--------------HADIVGPICETGDFIALNR-KIALPRPGD 364 ++ I + + GP C+ D I + GD Sbjct: 374 FNCILFDHQVVWPEALYAETEIRGIASVTNPTQVLFGPTCDGFDTIMQGVTHLPEMEIGD 433 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLI 388 L GAY + +N Sbjct: 434 HLLWRNMGAYTTAAATNFNGFDTP 457 >gi|213649626|ref|ZP_03379679.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 306 Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 117/301 (38%), Gaps = 31/301 (10%) Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + RV P++ + TH ++ T G+ + Q +P V + G+ MH+G Q+ Sbjct: 6 NVCVRVEPNVPSATHAELVTAFHAKS-GLDLEQAEETCRRILAMPYVHLRGLHMHVGDQV 64 Query: 205 DQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL---GIAYHSDHRPPSSSDYASLI 260 + E F KA K+L D +++ G I+VGGG+ + P + YA + Sbjct: 65 PESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGIT 124 Query: 261 HQ----------YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 Q + +I +EPGR + +L+T+V K+ + + Sbjct: 125 AQDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVE 184 Query: 311 FM---------RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI-----ALNRK 356 + + + + Y + + GP+C+ GD+ Sbjct: 185 WKFVDAGYSVLSDSQHFDWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 244 Query: 357 IA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELD 414 + GD++ GAY YN+R +M++ + +IR +++++++ D Sbjct: 245 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVKYD 304 Query: 415 S 415 Sbjct: 305 I 305 >gi|261253091|ref|ZP_05945664.1| carboxynorspermidine decarboxylase putative [Vibrio orientalis CIP 102891] gi|260936482|gb|EEX92471.1| carboxynorspermidine decarboxylase putative [Vibrio orientalis CIP 102891] Length = 377 Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 112/368 (30%), Gaps = 24/368 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 ++TP++ + + +N + + ALK S V + G Sbjct: 5 ELKTPYFMINEDKLIENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGP 64 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E++ E +S D ++A FN +S L + K Sbjct: 65 FEVKLGHE-TFGGETHAYSVGYSEDDVREVADICDKMIFNSQS-----QLAAYRHIVEGK 118 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 A I R+NP ++ P Q L A+ + +D + Sbjct: 119 ASIGLRLNPGVS----------YAGQDLANPARQFSRLGVQANHIKPEVFEDIDGVMFHM 168 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + LL +++Q + I +GGG+ + + + Sbjct: 169 NCENKDVDAFIGLLDSISEQFGQYLDKLDWISMGGGVFFTWPG----YDIEKLGLALKAF 224 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG ++ LV V+ I ++ KT ++ + +YD I Sbjct: 225 SEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENGKKTAIVDSATEAHRLDTLIYDEPASI 284 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 A D I C GD G L+I + Y V+ +N Sbjct: 285 L----EASDNGEHEYVIGSCSCLAGDQFCEASFEQPLEIGQRLHIMDSAGYTMVKLNWFN 340 Query: 384 SRLLIPEI 391 + Sbjct: 341 GLRMPSVY 348 >gi|315608072|ref|ZP_07883065.1| carboxynorspermidine decarboxylase [Prevotella buccae ATCC 33574] gi|315250541|gb|EFU30537.1| carboxynorspermidine decarboxylase [Prevotella buccae ATCC 33574] Length = 397 Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 65/390 (16%), Positives = 116/390 (29%), Gaps = 32/390 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + +N S+ + D + A KA + S E R Sbjct: 13 PMYVLEEARLRRNLSLISSVAEAADVEIILAFKAYALWKTFPIFKEYIQATTASSLWEAR 72 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + T DEID + S ++ + +QR ++ Sbjct: 73 LGY--EEFGSKTHTFSPAYTDDEIDEIARC-SSHLTFNSLTQYERYHQRVRTVNSGISCG 129 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NP+ + + +FG+ + L K+ Sbjct: 130 IRINPEYSEVETLLYNPCAPGTRFGV-----------RNALLPEKLPTDIEGFHCHTLCE 178 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + + + I+ I+ GGG + A+L + Sbjct: 179 SGADVFRRTLTHIEDKFGAWFSQIKWINFGGGHLMTRAGYDIDLL---VATLREFHARYP 235 Query: 268 QCKIILEPGRFLVADVGILVTKVISIK--KSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 K++LEPG G LV++V+ I + T IL+V+ M L YH Sbjct: 236 WLKVVLEPGSAFAWQTGELVSQVVDIVGGTDGEPTTAILNVSFTCHMPDCLEMPYHPRVR 295 Query: 326 ------------IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + G C +GDF+ + G+ + E Sbjct: 296 GAATLESEDVFLPQTTEDGGRSYVYRLGGNSCLSGDFMRSWAFDHPLQIGENIIFEDMLH 355 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIR 402 Y V++ T+N +V ++R Sbjct: 356 YTTVKTNTFNGISHPAIGLVRCDGSLEMLR 385 >gi|268680756|ref|YP_003305187.1| carboxynorspermidine decarboxylase [Sulfurospirillum deleyianum DSM 6946] gi|268618787|gb|ACZ13152.1| carboxynorspermidine decarboxylase [Sulfurospirillum deleyianum DSM 6946] Length = 380 Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 +E + + TP Y +E+N + + ALK + +A+ + SG Sbjct: 6 IETVLAQINTPAYVCEEALLEENLKLLKEVSERSGATILLALKGFAFKALAPLVDTYLSG 65 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 E + A +S K D ++ S FN ++ E Sbjct: 66 CTCSGLHEAKFAKE-FFKGSVCTYSPAYKEEDIDEVIALSEHLIFNSFNQWEKYKHKAMG 124 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + R+NP+++++ + + GI + K+ G++ Sbjct: 125 KT-----SCGLRLNPEVSSSPVDLYNPCGLYSRLGITKENMQYD----------KLEGIE 169 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + ++ +L+ ++ ++ I+ GGG I Sbjct: 170 GLHFHALCEQDADA-LEAVLKGFEERFGELISRMKWINFGGGHHITREGYD---VEKFIT 225 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + + + LEPG + G LV V+ I ILD++ M TL Sbjct: 226 LIRDFRERHNDITVYLEPGEAVGWQTGPLVASVLDIVH-NGMDIAILDISAEAHMPDTLA 284 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 Y G++ H+ + GP C GD + A GD L E Y V Sbjct: 285 MPYRAQIRGAGELGEKPHV-YRLGGPTCLAGDIMGDYTFDAPLHIGDKLIFEDMIHYTIV 343 Query: 378 QSGTYNSRLLIP-EIMVNGSQFHII 401 ++ T+N L ++ + ++ Sbjct: 344 KNTTFNGVKLPDLAVLRKDGAYEVV 368 >gi|288925034|ref|ZP_06418970.1| carboxynorspermidine decarboxylase [Prevotella buccae D17] gi|288338224|gb|EFC76574.1| carboxynorspermidine decarboxylase [Prevotella buccae D17] Length = 397 Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 65/390 (16%), Positives = 116/390 (29%), Gaps = 32/390 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P Y + +N S+ + D + A KA + S E R Sbjct: 13 PMYVLEEARLRRNLSLISSVAEAADVEIILAFKAYALWKTFPIFKEYIQATTASSLWEAR 72 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + T DEID + S ++ + +QR ++ Sbjct: 73 LGY--EEFGSKTHTFSPAYTDDEIDEIARC-SSHLTFNSLTQYERYHQRVRTVNSGISCG 129 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 R+NP+ + + +FG+ + L K+ Sbjct: 130 IRINPEYSEVETLLYNPCAPGTRFGV-----------RNALLPEKLPTDIEGFHCHTLCE 178 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + L + + + I+ I+ GGG + A+L + Sbjct: 179 SGADVFRRTLTHIEDKFGAWFSQIKWINFGGGHLMTRAGYDIDLL---VATLREFHARYP 235 Query: 268 QCKIILEPGRFLVADVGILVTKVISIK--KSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 K++LEPG G LV++V+ I + T IL+V+ M L YH Sbjct: 236 WLKVVLEPGSAFAWQTGELVSQVVDIVGGTDGEPTTAILNVSFTCHMPDCLEMPYHPRVR 295 Query: 326 IVNPAGDRL------------HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + G C +GDF+ + G+ + E Sbjct: 296 GAATLESEDGFLPQTAEDGGRSYVYRLGGNSCLSGDFMRSWAFDHPLQIGENIIFEDMLH 355 Query: 374 YGAVQSGTYNSRLLIPEIMVN-GSQFHIIR 402 Y V++ T+N +V ++R Sbjct: 356 YTTVKTNTFNGISHPAIGLVRCDGSLEMLR 385 >gi|86142066|ref|ZP_01060590.1| arginine decarboxylase [Leeuwenhoekiella blandensis MED217] gi|85831629|gb|EAQ50085.1| arginine decarboxylase [Leeuwenhoekiella blandensis MED217] Length = 466 Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 55/443 (12%), Positives = 128/443 (28%), Gaps = 35/443 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 FK L ++ L L P + Y I +N F++A + Sbjct: 19 EFKLEGNQLEFHDIDLMALVKEYGAPLKFSY-LPKISENINRAKGWFADAIAKHNYKGSY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K++ + V+ ++ S ++ + + V + D Sbjct: 78 NYCYCTKSSHFKHVLDEALKNDIHIETSSAFDIDIVNKLKENGKITEDTFVICNGFKRDQ 137 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 + + N ++ + ++ I I A+ + Sbjct: 138 YINNIAALINGGQKNCIPIIDNYEEINLLTEGIKGDFKIGIRIASEEEPKFEFYTSRLGI 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + V + + I + I + + +L+ ++ Sbjct: 198 GYKNIVPFYEEQIKNNDQVDLKMLHFFINTGIRDNAYYWNELNKCLKVYIRLKKICPSLD 257 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGIL 286 +++GGG I + +I+Q I E G F V + G Sbjct: 258 SLNIGGGFPIKNSLAFDYDYAYMVDEIINQIKITCDEAEVPVPNIFTEFGSFTVGESGGA 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +V+ K+ D+ + + P + + D + + G C+ Sbjct: 318 IYEVLYQKQQNDREKWNMINSSFITTLPDTWAISKRFIMLPVNRWDEEYERVLLGGLTCD 377 Query: 347 TGDFI-----ALNRKIALPRPGD---LLYIEKTGAYGAVQSG----TYNSRLLIPEIMVN 394 + D+ + + + D + TGAY G + I+++ Sbjct: 378 SDDYYNSEQHSNAIYLPRYK-KDKPLYIGFFNTGAYQETIGGYGGLQHCLIPQPKHILID 436 Query: 395 GSQ-----FHIIRPRMTFQELIE 412 + I + ++L++ Sbjct: 437 RDENGNLTTRIFNEQQKAEQLLK 459 >gi|328858639|gb|EGG07751.1| hypothetical protein MELLADRAFT_71643 [Melampsora larici-populina 98AG31] Length = 562 Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 108/272 (39%), Gaps = 15/272 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + YL + G +A+K N + VI A LG G D S E+ + Sbjct: 117 FYVCDLAVVYRLYLRWQKVM-GRRVKPFFAVKCNPDPHVINLFAKLGLGFDCASHAEIAQ 175 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V I+++ K I A SG+ ++ EL + + S I Sbjct: 176 VLAFGVSPSNIIYANPCKAGSFIRHAHASGVEMMTFDNMDELHKVAKHHPSAKMVIRILI 235 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + S + +KFG P+ +H L A L V + GV H+GS E Sbjct: 236 D----------DRGSLCRFGEKFGAPLENVHLLLGTARQLG-VNVIGVAFHVGSGCTNPE 284 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A K + + + +G+ +DVGGG G + + A L + Sbjct: 285 LYKDALKHAKWVFELASQHGYQFNLLDVGGGFG---DDNLEFLAEGLLAGLDEYFPVGCG 341 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT 300 +I EPGR+ V + L T VI+ ++ ++ Sbjct: 342 VNVIAEPGRYFVTEAFELATNVIARRQVSNTK 373 Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Query: 334 LHIHADIVGPICETGDFIALNRKIA--LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 I GP C++ D + + + + GD L E+ GAY + +N Sbjct: 482 ELHACRIFGPSCDSIDLVCPRTLLPTEVLKVGDWLKWERMGAYTVCAASQFNGF 535 >gi|148557557|ref|YP_001265139.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1] gi|148502747|gb|ABQ71001.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1] Length = 397 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 105/349 (30%), Gaps = 14/349 (4%) Query: 49 DGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKT 107 + YA+KAN + +I+ L G D+ S E+R A V Sbjct: 37 EKFQGRSMYAVKANPSPELIQILWENGITHFDVASIAEVRLVAGIAPEATLCFMHPVKAE 96 Query: 108 IDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK 167 + G+ F+++S E L + + + V +++ K K Sbjct: 97 EAIAEAYSDYGVRTFSLDSIEE---LEKIVRATNGATDLTLCVRMRVSSELSKLSLASKF 153 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 + + A L G+ H+GSQ ++ +A + +R Sbjct: 154 GVEQAEAKELLQRTRQVADAL------GICFHVGSQAMSPSAYVQAMERVRAAIVAAAVT 207 Query: 228 GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 I + + ++ EPGR L A+ L+ Sbjct: 208 VDVIDVGGGFPSVYPDMEPPALEAYFGAIHQAFESLPVSYSSELWCEPGRALCAEYASLL 267 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 +V ++ I D A + + P I GP C+ Sbjct: 268 VRV---ERRRGDELYINDGAYGALFDAAHIGWRFPVKLLREPESPARDIGFSFYGPTCDD 324 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNG 395 D +A + PGD + I GAYG +N ++V Sbjct: 325 MDRMAGPFMLPADVGPGDYIEIGMLGAYGCAMRTGFNGFTAGDRVIVED 373 >gi|160420255|ref|NP_001087651.1| MGC81763 protein [Xenopus laevis] gi|51895808|gb|AAH81043.1| MGC81763 protein [Xenopus laevis] Length = 442 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 103/360 (28%), Gaps = 32/360 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y ++ NS+ AV++ LA LG G ++ E+ Sbjct: 40 FFVADLGKIVKKHFKWKNIMGHIKP--FYTVRCNSSPAVLEILAALGMGFACANKNEMSL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + E +V++ K +I A + G+ +SE+ELK + + Sbjct: 98 VYDLGISMENVVYTNPCKQASQIKHAAKIGVNLMTCDSETELKKIARNH----------L 147 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 ++ T + FG + L A L + S Q Sbjct: 148 NAKLLLHVATEGMSGEEEMSMTFGTTLKNCRHLLDCAKELSVEVVGVKFHVSNSSNQQTY 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + + + NI I ++ + Sbjct: 208 NHALSDARCVFDMAEELGFKMNILDIGGIPENEAQLEELYQAVGPLL----DVYFPEGSG 263 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTF----------------VILDVAMNDFM 312 +II EPG F V+ L VI+ + + + F Sbjct: 264 TRIIAEPGSFYVSSAFTLAVNVIAKETIEHDHHLSSAGKPISNKLAFVYCLNEGVYGSFA 323 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 R + ++G + D I + + GD + E G Sbjct: 324 RKLFEKLDTTPEVHKKYKDGEPLFTSSLLGASYDELDVIVDHCVLPELEVGDWIVFENMG 383 >gi|326387669|ref|ZP_08209275.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium nitrogenifigens DSM 19370] gi|326207715|gb|EGD58526.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium nitrogenifigens DSM 19370] Length = 402 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 102/339 (30%), Gaps = 9/339 (2%) Query: 49 DGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKT 107 + YA+KAN + +I+ L G D+ S GE R A V Sbjct: 37 EKFPGKTLYAVKANPSPDLIRVLWDAGVTHYDVASVGEARLVRGLLPEATLCFMHPVKAP 96 Query: 108 IDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK 167 ++ G+ F+++S EL+ + + + + S Sbjct: 97 SAILEAYRDHGVRTFSLDSLEELEKIRLATTEANDGVEPT-DLTLCVRLRVSSEYSELSL 155 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 KFG + L L G+ H+GSQ ++ +A + R Sbjct: 156 ASKFGCELSDAAELLQATRQLA--DCLGICFHVGSQAMSPHAYVQALEKARAAIVDASVT 213 Query: 228 GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 I + + + ++ EPGR L A+ ++ Sbjct: 214 VDIIDVGGGFPSIYPGMEPPPLEDYFALIDRTYESLPVSYSAELWCEPGRALSAEYNSMI 273 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 +V + A+ D ++ + + GP C+ Sbjct: 274 VRVEKRRGDELYINDGAYGALFDAAHVGWRFP----VRLLREDANGDNADFSFYGPTCDD 329 Query: 348 GDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D + ++ R GD + I GAYGA +N Sbjct: 330 MDHMEGPFELPADIRSGDYIEIGMLGAYGAAMKTRFNGF 368 >gi|110634377|ref|YP_674585.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium sp. BNC1] gi|110285361|gb|ABG63420.1| Orn/DAP/Arg decarboxylase 2 [Chelativorans sp. BNC1] Length = 406 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 102/371 (27%), Gaps = 27/371 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELR 87 YC+ ++ + F F G YA+K N V+KTLA G D+ S E Sbjct: 20 VYCFRPEVLKADARGFMGLFPG---KTAYAVKTNGEPLVLKTLAEAGVTAFDVASPAEFA 76 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A AE + V D GI V+ E E+ L + Sbjct: 77 AVRAVAPSAEMLYMHPVKAQADIRLALEGYGIRKIAVDHEDEVTKL----------TRVV 126 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 ++ D T K + + + L + +G + I + Sbjct: 127 RALDIDPGRLTVFVRIQTKGQATYELSKKFGAGPAQAVQLLQRLHRNGYKVGICFHVGSQ 186 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY---------AS 258 ++ +R GG A + S+ Sbjct: 187 IEEPYVYERALASADWVRGRAGVPLAALDIGGGFPAEYGHDPNRRKSEMPSLEELMARVR 246 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKV---ISIKKSADKTFVILDVAMNDFMRPT 315 +G ++ EPGR +VA L+ +V + + Sbjct: 247 ADIAEWGFDTLPLVAEPGRVIVARAFSLIVRVLLRKGRRLYINDGIWASLSDSWTGKITL 306 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAY 374 + + + G C++ D ++ + GD + I GAY Sbjct: 307 PARFIPDPAIRSRSGSAENIVPFRVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAY 366 Query: 375 GAVQSGTYNSR 385 +N Sbjct: 367 SMALRTRFNGF 377 >gi|332290904|ref|YP_004429513.1| Orn/DAP/Arg decarboxylase 2 [Krokinobacter diaphorus 4H-3-7-5] gi|332168990|gb|AEE18245.1| Orn/DAP/Arg decarboxylase 2 [Krokinobacter diaphorus 4H-3-7-5] Length = 463 Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats. Identities = 54/442 (12%), Positives = 127/442 (28%), Gaps = 35/442 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 F + L + L KL P + Y I N F++A Sbjct: 19 EFNLNKNHLEFHGIDLMKLVEQYGAPLKFTY-LPKISDNIQRAKKWFADAIQANGYEGSY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K++ + V+ ++ S ++ + + + V + + Sbjct: 78 NYCYCTKSSHFKHVLNEALSNDIHIETSSAFDIDIVESLKAAGKITDDTYVISNGFKRER 137 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 +++ N ++ + ++ I + I A+ + Sbjct: 138 YVENIARLINNGHKNAIPVIDNYEEIDLLSNQINGKFKVGIRIASEEEPKFEFYTSRLGI 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + V++ + I + I + + L+ ++ Sbjct: 198 GYKNIVPFFNNQIKNNEKVELKMLHFFINTGIRDTAYYWNELMKCIKVYINLKKICPSLD 257 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGIL 286 +++GGG I + +I Q I E G F V + G Sbjct: 258 SLNIGGGFPIKNSLAFEYDYAYMINEIIAQIKQACDDADVKVPNIFTEFGSFTVGESGGA 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +V+ K+ D+ + + P + + + + + G C+ Sbjct: 318 IYEVLYQKQQNDREKWNMINSSFITTLPDTWAINKRFIMLAVNRWNEEYERVLLGGLTCD 377 Query: 347 TGDFI-----ALNRKIALPRPGD---LLYIEKTGAYGAVQSG----TYNSRLLIPEIMVN 394 + D+ + + D + TGAY G + I+++ Sbjct: 378 SDDYYNSEQHMNAIYMPKYK-KDKPLYIGFFNTGAYQESIGGFGGLQHCLVPSPKHILID 436 Query: 395 ---GSQF--HIIRPRMTFQELI 411 + I + T ++L+ Sbjct: 437 RNEDGEITTEIFAEQQTSEQLL 458 >gi|94497588|ref|ZP_01304157.1| diaminopimelate/ornithine decarboxylase [Sphingomonas sp. SKA58] gi|94423005|gb|EAT08037.1| diaminopimelate/ornithine decarboxylase [Sphingomonas sp. SKA58] Length = 402 Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 104/338 (30%), Gaps = 11/338 (3%) Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKTI 108 YA+KAN + +I+TL G D+ S E+R A + + Sbjct: 38 KFPGRSLYAVKANPSPDLIRTLFASGITHFDVASIAEVRLVAEALAGQDGAKLCFMHPVK 97 Query: 109 DEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 E +A ++ S + L++ + G + V +++ + K Sbjct: 98 AEEAIAEAYHVHGVRTFSLDTIDELDKIMRATGHATDLELCVRLRVSSEHAELSLASKFG 157 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 + G + + A L G+ H+GSQ +++ A + +R Sbjct: 158 AELGETRELLMATRQAADAL------GICFHVGSQAMSPQAYSDAIERVRAAIVDAAVTV 211 Query: 229 HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVT 288 I + + ++ EPGR L A+ + Sbjct: 212 DIIDVGGGFPSVYPGMEPVSLERYFDAIHRGFESLPISYSAELWCEPGRALSAEYS---S 268 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 V+ +++ I D A + + A GP C+ Sbjct: 269 VVVRVERRRGNELYINDGAYGALFDAAHIGWRFPVELLREEASLESLEGFSFYGPTCDDM 328 Query: 349 DFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D + + + GD + I GAYGA +N Sbjct: 329 DHMVGPFMLPSDVKAGDYIEIGMLGAYGAAMRTGFNGF 366 >gi|298708522|emb|CBJ49155.1| diaminopimelate decarboxylase [Ectocarpus siliculosus] Length = 477 Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats. Identities = 85/408 (20%), Positives = 149/408 (36%), Gaps = 53/408 (12%) Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 C A+K+ V++ G G++ S EL LA PA F KT E+++AL Sbjct: 63 CVAVKSCPLSVVVQEAVRAGLGIEAASFVELYMGLALGCPAVLAAFDSPAKTDGELEMAL 122 Query: 116 QSGI-YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 G+ N E + + A + R+NP + A + ++S KF +P Sbjct: 123 ARGVLINANSLVELDRIDAIIKRQGCATSARVGIRLNPLVGAGSIAELSVSTSTSKFAVP 182 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH- 233 + + S + + H+GSQ +E + +L ++ + S + Sbjct: 183 MTPANVQAVVDSFRKWPWLVALHTHVGSQGYSVEQLAEGIAVLCEIADVIDSKLGKGRVT 242 Query: 234 -IDVGGGLGIAYHSDHRPPSSSDYASLIHQY----FGNLQCKIILEPGRFLVADVGILVT 288 +D+GGGL Y SD P+ +YA+ + + F N + ++ E GR VA V + V+ Sbjct: 243 LLDIGGGLPANYDSDEVSPTFHEYAAALKKAAPSLFHNTERIVVTEFGRAFVAKVAMTVS 302 Query: 289 KVISIKKSADK-----------------------------------------TFVILDVA 307 KV ++ S T + D+ Sbjct: 303 KVEYVRSSDGSGAEGRAAGKATQQEEDPSNVVGSPGKVPESSLPVEDHQTLVTHIGADLF 362 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 + P Y + A I D+ GP+C GD++A + PGDL+ Sbjct: 363 LRTSYCPGRYSHRLSMYSRNGAALGGSAIRTDVAGPLCFQGDYVARGASLPRASPGDLVV 422 Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMV---NGSQ--FHIIRPRMTFQEL 410 + TGA + SR +++ + + Q++ Sbjct: 423 VHDTGANTLSLFSRHCSRRFPSVYGYARNADGTVCVRLVKEKESVQDV 470 >gi|103486685|ref|YP_616246.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256] gi|98976762|gb|ABF52913.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256] Length = 397 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 105/340 (30%), Gaps = 14/340 (4%) Query: 48 FDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVFSGVGK 106 + YA+KAN + +++ L G D+ S E+R A V Sbjct: 36 IERFPGTTMYAVKANPSADLLRVLWDSGVTHYDVASIAEVRLVARTLPQATLCFMHPVKA 95 Query: 107 TIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK 166 + + G+ F++++ E L + + + V ++++ K K Sbjct: 96 EEAISEAYWKHGVRTFSLDTLDE---LEKIVRATEGAQDLNLLVRLRVSSDHSKLSLAAK 152 Query: 167 KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 + + + A L G+ H+GSQ ++ +A + +R Sbjct: 153 FGAEPEDVAELLMATRQAADAL------GICFHVGSQAMTPHAYAQAMERVRAAIVAASV 206 Query: 227 NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 I + ++ EPGR L A+ L Sbjct: 207 TVDIIDVGGGFPSSYPGMEPPPLDAYFDTIHRSFESLPISYSAELWCEPGRALSAEYSSL 266 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +V +K + I D A ++ + + GP C+ Sbjct: 267 IVRV---EKRRGEELYINDGAYGALFDAAHVGWRFPVSLQRDAESGAELLPFSFYGPTCD 323 Query: 347 TGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 D +A + + GD + I GAYG +N Sbjct: 324 DLDHMAGPFFLPADIKAGDFIEIGMLGAYGCAMRTKFNGF 363 >gi|257413467|ref|ZP_05591664.1| protein TabA [Roseburia intestinalis L1-82] gi|257203426|gb|EEV01711.1| protein TabA [Roseburia intestinalis L1-82] Length = 148 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 1/112 (0%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS 76 LE++ TPF+ Y I +N AF +A+KA N ++ L Sbjct: 12 LEEIVKKYPTPFHLYDEKGIRENAKAVKEAFSWNPGFREYFAVKATPNPYILDILKEYDC 71 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 G D S EL A + + I+FS +E A + G + Sbjct: 72 GCDCASLTELMLADSQGFDGKHIMFSSNDTPAEEFKFANELGAIINLDDFTH 123 >gi|55742262|ref|NP_001007160.1| antizyme inhibitor 1 [Danio rerio] gi|38541987|gb|AAH61960.1| Antizyme inhibitor 1 [Danio rerio] Length = 436 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 119/363 (32%), Gaps = 34/363 (9%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F A+ + ++ + Y + NS+ VI+ L+ LG G ++ E Sbjct: 40 FVVADLGALMRQHVVWKTTMPL--VRPFYPVSCNSSPVVIELLSALGVGFVCANKAETTL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L+ VP E I+ SGV K + I A ++GI E+E+EL+ + + ++ Sbjct: 98 VLSHDVPPENIILSGVCKQLLLIKHAAKTGINFLLCENEAELRKIARAHPEAKLLLQVS- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + + G + L A L ++GV + + + Sbjct: 157 -----------TEAQIEEASVTIGCSLKGCRHLLELAKELNVS-VAGVTFQVPASCKDPQ 204 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 ++ A R + + G ++ +D+GGG + + S L + Sbjct: 205 AYTHALSDARCIFDMGKELGFDMNILDIGGGFSGSEFQLKQVHSVIR-PLLEAYFPSESG 263 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH------- 321 II EPG F V L VI K + + P + Sbjct: 264 VSIIAEPGNFFVFSCFTLAVNVIGKKAAYRDLHTSTHDKLTSSEAPEFVYYMNDGVYGSF 323 Query: 322 -----------EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + ++ D + + GP C+ D + + GD L Sbjct: 324 MGRLFGNIISTPSVHKMSLTLDEPVFSSSLWGPSCDPLDQVVERCLLPELAVGDWLVFIN 383 Query: 371 TGA 373 GA Sbjct: 384 MGA 386 >gi|227540421|ref|ZP_03970470.1| arginine decarboxylase, biosynthetic [Sphingobacterium spiritivorum ATCC 33300] gi|227239745|gb|EEI89760.1| arginine decarboxylase, biosynthetic [Sphingobacterium spiritivorum ATCC 33300] Length = 463 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 57/425 (13%), Positives = 129/425 (30%), Gaps = 28/425 (6%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPF---YC------YSTTAIEKNYLTFSNAFDGMD 52 F+ + L+ +++L ++ TP Y I + + G Sbjct: 17 DGFEIIDDELYFHDLNLMEMIETYGTPLRFTYLPIVSKKIQQAKILFQTAILKHNYRGS- 75 Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 CY K++ + +++ L+ S ++ V + Sbjct: 76 YKYCYCTKSSHFKHIVEEALKNDIHLETSSAFDMPMIDTLERQGTVTKDITVICNGFKTY 135 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN---ANTHKKISTGKKED 169 Q I + ++ + L+ + I + A+ + S Sbjct: 136 QYKQYIIDMIHDGYKNIIPVLDNKEEFNLYDDEIELDEPCALGIRIASEEQPDSQFYTSR 195 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 I + P K+ + I S I + + L + + Sbjct: 196 LGIRSEDIIDFYNNKIADNPNFKVKLLHFFINSGISDTPYYWNELEKYVTLYCKFKKINP 255 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ------YFGNLQCKIILEPGRFLVADV 283 + +D+GGG+ H ++++ + ++ II E G++ VA+ Sbjct: 256 ELDTLDIGGGMPFKDSLVHDFDYEYMVNEIVNRIKQICAHHEVMEPDIITEFGKYTVAEA 315 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 ++ KV+ K+ D+ + P ++ + + D + ++ G Sbjct: 316 SGILYKVLGRKQQNDRERWFMIDGSFITNLPDVWALNQKYILLPINNWDSEYERVNLGGI 375 Query: 344 ICETGDFI-----ALNRKIALPRPGDLLYIEKTGAYGAVQSG----TYNSRLLIPEIMVN 394 C+ D+ + + R L TGAY V SG + ++V Sbjct: 376 TCDGQDYYNQEAHMNSVFMPKTRKVQYLGFFHTGAYQDVLSGYGGIHHCLLPSPKHVLVR 435 Query: 395 GSQFH 399 ++ Sbjct: 436 RNRDE 440 >gi|255536389|ref|YP_003096760.1| putative arginine decarboxylase [Flavobacteriaceae bacterium 3519-10] gi|255342585|gb|ACU08698.1| putative arginine decarboxylase [Flavobacteriaceae bacterium 3519-10] Length = 463 Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats. Identities = 63/447 (14%), Positives = 129/447 (28%), Gaps = 41/447 (9%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF---YCYSTTAIEKNYLT----FSNAFDGMDTM- 54 F E +L ++ L + TP Y I N F A + D Sbjct: 19 EFNVSENTLLFHDIPLMDVVEQFGTPLKFNY---LPKISMNIQRAKAWFKEAIEKNDYKK 75 Query: 55 ---VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 CY K++ V++ ++ S ++ A + V + Sbjct: 76 GYRYCYCTKSSQFAFVLEEALKNDISIETSSAYDMDIVKALYDKGKYDKDVEVICNGFKT 135 Query: 112 DLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDK 170 D L N ++ + L+ I N I A+ + Sbjct: 136 DDYLAKISDLINSGFQNIVPVLDNYRELDKLTESIDTTFNIGIRIASEEEPKFEFYTSRL 195 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 I + P ++ + I + I + + +L+ Sbjct: 196 GIGYKDIIPYYSQKIAEHPNARLKMLHFFINTGIKDTAYYWNELYKCLRVYARLKKIAPE 255 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL------QCKIILEPGRFLVADVG 284 + +++GGG I + ++ Q + I E G F V + G Sbjct: 256 VDSLNIGGGFPIKTSLNFDYDYQYMVNEIVSQIKKFCEEEGVEEPNIYTEFGSFTVGESG 315 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 + K+IS K+ D+ + + P + + D + + G Sbjct: 316 GNLYKIISQKRQNDREKWNMIDSSFMTTLPDTWAISRHFIMLPLNRWDDTYERVFLGGLT 375 Query: 345 CETGDFI-----ALNRKIALPRPGD----LLYIEKTGAYGAVQSG----TYNSRLLIPEI 391 C++ D+ + + D + TGAY G + I Sbjct: 376 CDSDDYYNSEQHTNAIYLPVFS--DTKPLYIGFFHTGAYQETIGGYGGVHHCLMPQPKHI 433 Query: 392 MVNGSQ-----FHIIRPRMTFQELIEL 413 ++N + + + R +++++L Sbjct: 434 LINKDEEGNFTYEVFREEQRPEDVLKL 460 >gi|326800401|ref|YP_004318220.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Sphingobacterium sp. 21] gi|326551165|gb|ADZ79550.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Sphingobacterium sp. 21] Length = 463 Score = 99.9 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 57/425 (13%), Positives = 129/425 (30%), Gaps = 28/425 (6%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPF---YC------YSTTAIEKNYLTFSNAFDGMD 52 F + L+ +++L ++ TP Y I N + G Sbjct: 17 DGFDIIDDELYFHDLNLMEMIETYGTPLRFTYLPIISKKIQQAKILFQTAILKNNYRGS- 75 Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 CY K++ + V++ L+ S ++ A V + Sbjct: 76 YKYCYCTKSSHFRHVVEEALKNDIHLETSSAFDMPMIDALEKKGVVSKDITVICNGFKTF 135 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN---ANTHKKISTGKKED 169 Q + + ++ + L+ + + ++ A + S Sbjct: 136 QYKQYIVDMLHDGFKNIIPVLDNKEEFNLYDDEVELDEPCNLGIRIAAEEQPDSQFYTSR 195 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + P K+ + I S I + + L + + Sbjct: 196 LGVRMEDILDFYNNKIVHNPNFKVKLLHFFINSGISDTPYYWNELEKYVTLYCKFKKINP 255 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY------FGNLQCKIILEPGRFLVADV 283 ++ +D+GGG+ H ++++ ++ II E G++ VA+ Sbjct: 256 DLDTLDIGGGMPFKDSLVHDFDYEYMVNEIVNRIKEICALHEVMEPDIITEFGKYTVAEA 315 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 ++ KV+ K+ D+ ++ P ++ + + D + ++ G Sbjct: 316 SGILYKVLGRKQQNDREKWLMLDGSFITNLPDVWALNQKYILLPINNWDSEYERVNLGGI 375 Query: 344 ICETGDFI-----ALNRKIALPRPGDLLYIEKTGAYGAVQSG----TYNSRLLIPEIMVN 394 C+ D+ N + R L TGAY V SG + +++ Sbjct: 376 TCDGQDYYNQEAHMNNVFMPRTRKVQYLGFFHTGAYQEVLSGYGGIHHCLLPSPKHVIIR 435 Query: 395 GSQFH 399 ++ Sbjct: 436 RNRDE 440 >gi|255019228|ref|ZP_05291354.1| hypothetical protein LmonF_18396 [Listeria monocytogenes FSL F2-515] Length = 68 Score = 99.9 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%) Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + + + G++L + TGAYG + YN P + V +I R T++ Sbjct: 1 MLIWDLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYEN 60 Query: 410 LIELD 414 L++ D Sbjct: 61 LVQND 65 >gi|300771211|ref|ZP_07081087.1| arginine decarboxylase [Sphingobacterium spiritivorum ATCC 33861] gi|300761881|gb|EFK58701.1| arginine decarboxylase [Sphingobacterium spiritivorum ATCC 33861] Length = 463 Score = 99.9 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 56/425 (13%), Positives = 130/425 (30%), Gaps = 28/425 (6%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPF---YC------YSTTAIEKNYLTFSNAFDGMD 52 F+ + L+ +++L ++ TP Y I + + G Sbjct: 17 DGFEIIDDELYFHDLNLMEMIETYGTPLRFTYLPIVSKKIQQAKILFQTAILKHNYRGS- 75 Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 CY K++ + +++ L+ S ++ V + Sbjct: 76 YKYCYCTKSSHFKHIVEEALKNDIHLETSSAFDMPMIDTLERQGTVTKDITVICNGFKTY 135 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN---ANTHKKISTGKKED 169 Q I + ++ + L+ + I ++ A+ + S Sbjct: 136 QYKQYIIDMIHDGYKNIIPVLDNKEEFNLYDDEIELDEPCNLGIRIASEEQPDSQFYTSR 195 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 I + P ++ + I S I + + L + + Sbjct: 196 LGIRSEDIIDFYNNKIADNPNFRVKLLHFFINSGISDTPYYWNELEKYVTLYCKFKKINP 255 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ------YFGNLQCKIILEPGRFLVADV 283 + +D+GGG+ H ++++ + ++ II E G++ VA+ Sbjct: 256 ELDTLDIGGGMPFKDSLVHDFDYEYMVNEIVNRIKQICAHHEVMEPDIITEFGKYTVAEA 315 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 ++ KV+ K+ D+ + P ++ + + D + ++ G Sbjct: 316 SGILYKVLGRKQQNDRERWFMIDGSFITNLPDVWALNQKYILLPINNWDSEYERVNLGGI 375 Query: 344 ICETGDFI-----ALNRKIALPRPGDLLYIEKTGAYGAVQSG----TYNSRLLIPEIMVN 394 C+ D+ + + R L TGAY V SG + ++V Sbjct: 376 TCDGQDYYNQEAHMNSVFMPKTRKVQYLGFFHTGAYQDVLSGYGGIHHCLLPSPKHVLVR 435 Query: 395 GSQFH 399 ++ Sbjct: 436 RNRDE 440 >gi|260427217|ref|ZP_05781196.1| Orn/DAP/Arg decarboxylase 2 [Citreicella sp. SE45] gi|260421709|gb|EEX14960.1| Orn/DAP/Arg decarboxylase 2 [Citreicella sp. SE45] Length = 375 Score = 99.9 bits (247), Expect = 8e-19, Method: Composition-based stats. Identities = 63/378 (16%), Positives = 118/378 (31%), Gaps = 33/378 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGEL 86 P + + + + F F G +V YA+KAN ++ L G D+ S E+ Sbjct: 23 PVFFFCPVRLAQVTERFRRGFPG---LVTYAVKANPAPEMLDGLVAAGIRAFDVASPAEM 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A P + + ++ EID L G ++V+ EL+ L++ + Sbjct: 80 ALVR-AHCPDAVLHYHNPVRSEAEIDAGLAHGCVSWSVDRMRELEKLSRLPKGTEIAVRL 138 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 V FG L + Sbjct: 139 KLPVTGAA--------------YDFGAKFGAEPRLAQELLERVAEMGFVPSLTFHPGTQC 184 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS-SSDYASLIHQYFG 265 A + ++ + R+ G + ++VGGG H + + Sbjct: 185 RTPEPWA-RYIQAAAEIARAAGVTLHRLNVGGGFPSDRGEGHPDLDAIFRTIAETTRAAF 243 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ +++ EPGR L A+ +L +V +++ +A + M ++ R + Sbjct: 244 DVPPRLVCEPGRGLCAEAFLLALRVKAVEDAAVFLNDGIYGGMAEW-RDLGPMGRLRVVT 302 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYGAVQSGTYNS 384 + GP C++ D + + R D + E GAY +N Sbjct: 303 PEGLPRGGAFRGRIVFGPTCDSLDRLPDPVALPEGIREDDFIVFEGMGAYSRALVTGFNG 362 Query: 385 RLLIPEIMVNGSQFHIIR 402 IIR Sbjct: 363 Y----------GARRIIR 370 >gi|254226118|ref|ZP_04919715.1| carboxynorspermidine decarboxylase [Vibrio cholerae V51] gi|125621353|gb|EAZ49690.1| carboxynorspermidine decarboxylase [Vibrio cholerae V51] Length = 387 Score = 99.9 bits (247), Expect = 8e-19, Method: Composition-based stats. Identities = 52/391 (13%), Positives = 112/391 (28%), Gaps = 26/391 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L ++TP++ + N + + + ALK S V + G Sbjct: 12 LKDELKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTS 71 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E++ E +S D ++ FN +S+ Sbjct: 72 SGPFEVKLGYE-TFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRH------- 123 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 V ++ P Q L A + ++ + Sbjct: 124 --------LVEGKVSLGLRINPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVM 175 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + LL ++++ + + +GGG+ + + + Sbjct: 176 FHMNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVEKLGAAL 231 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 232 KAFAERHAVQLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEP 291 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + A D I C GD + + + G L+I + Y V+ Sbjct: 292 ASVL----EASDNGQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLN 347 Query: 381 TYNSRLLIPEIM-VNGSQFHIIRPRMTFQEL 410 +N + Q I ++++ Sbjct: 348 WFNGLKMPSVYCERKNGQIQKINQ-FSYEDF 377 >gi|156317064|ref|XP_001618032.1| hypothetical protein NEMVEDRAFT_v1g8610 [Nematostella vectensis] gi|156197064|gb|EDO25932.1| predicted protein [Nematostella vectensis] Length = 184 Score = 99.5 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 98/183 (53%), Positives = 126/183 (68%) Query: 57 YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 YA+KANSN AV+ L+ LG+G DIVS GEL R L A ERIVFSGVGK EI AL+ Sbjct: 1 YAVKANSNLAVLNVLSRLGAGFDIVSVGELERVLRAGAKPERIVFSGVGKQPAEIRRALE 60 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 GI CFNVESE+EL+ +NQ A GK A I+FRVNPD++A TH ISTG KE+KFGI I Sbjct: 61 VGILCFNVESEAELERVNQVAGECGKTAEISFRVNPDVDAGTHPYISTGLKENKFGIAIA 120 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + +Y +A++LP + + G+D HIGSQ+ ++ F A + L L +L G I+H+D+ Sbjct: 121 EAKRIYQHAASLPHIHVVGMDCHIGSQLTELAPFMDALERLLGLIDELAEVGITIKHLDL 180 Query: 237 GGG 239 GGG Sbjct: 181 GGG 183 >gi|149280425|ref|ZP_01886545.1| arginine decarboxylase, biosynthetic [Pedobacter sp. BAL39] gi|255532214|ref|YP_003092586.1| Orn/DAP/Arg decarboxylase 2 [Pedobacter heparinus DSM 2366] gi|149228839|gb|EDM34238.1| arginine decarboxylase, biosynthetic [Pedobacter sp. BAL39] gi|255345198|gb|ACU04524.1| Orn/DAP/Arg decarboxylase 2 [Pedobacter heparinus DSM 2366] Length = 463 Score = 99.5 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 57/430 (13%), Positives = 129/430 (30%), Gaps = 42/430 (9%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPF----------------YCYSTTAIEKNYLTFSNA 47 + + L+ ++++L ++ TP + T I+ NY Sbjct: 19 YSVIDDELYFQDLNLMEMIETYGTPLRFTYLPMISKKIQQAKLLFQTAIIKNNYR----- 73 Query: 48 FDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKT 107 D CY K++ + +++ G L+ S ++ A V Sbjct: 74 ---GDYKYCYCTKSSHFRHIVEEALKNGIHLETSSAFDMPMIEALEKKGALTKDITVICN 130 Query: 108 IDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN---ANTHKKIST 164 + Q I + ++ + L+ + + ++ A + S Sbjct: 131 GFKTYQYKQYIIDMLHDGYKNIIPVLDNKEEFNLFDDEVEMDTPCNLGIRIAAEEQPDSQ 190 Query: 165 GKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL 224 I S P ++ + I S I + + L + Sbjct: 191 FYTSRLGVRMEDVIDFYNNKISANPNFRVKLLHFFINSGITDSPYYWNELEKYVTLYCKF 250 Query: 225 RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCK------IILEPGRF 278 + + +D+GGG+ ++ + II E G++ Sbjct: 251 KKINPELDTLDIGGGMPFKDSLVFDFDYEYMVNEIVKRIKEICAEHDVVEPDIITEFGKY 310 Query: 279 LVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 VA+ ++ KV+ K+ D+ ++ P ++ + + D + Sbjct: 311 TVAEASGILYKVLGRKQQNDREKWLMLDGSFITNLPDVWALNQKYILLPINNWDAEYERV 370 Query: 339 DIVGPICETGDFI-----ALNRKIALPRPGDLLYIEKTGAYGAVQSG----TYNSRLLIP 389 ++ G C+ D+ + + R L TGAY V SG + Sbjct: 371 NLGGITCDGQDYYNQEAHMNSVFMPKTRKVQYLGFFNTGAYQEVLSGYGGIHHCLLPSPK 430 Query: 390 EIMVNGSQFH 399 +++ ++ Sbjct: 431 HVIIRRNRDE 440 >gi|149371929|ref|ZP_01891248.1| arginine decarboxylase, biosynthetic [unidentified eubacterium SCB49] gi|149355069|gb|EDM43630.1| arginine decarboxylase, biosynthetic [unidentified eubacterium SCB49] Length = 463 Score = 99.5 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 51/445 (11%), Positives = 123/445 (27%), Gaps = 41/445 (9%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLTFSNAFDGM--------DT 53 F L +V L L P + Y I +N F+ Sbjct: 19 EFTLKGDQLQFHDVDLMALVAQYGAPLKFTY-LPKISENIQRAKQWFENSIKAQNYKGSY 77 Query: 54 MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K++ + V+ ++ S ++ + + V + + Sbjct: 78 NYCYCTKSSHFKHVLHEATKNDIHIETSSAFDINIIENLKAEGKITDKTFVICNGFKREQ 137 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 + + N E+ + ++ I I A+ + Sbjct: 138 YITNITRLINDGQENCIPIIDNYEELDLLSEGIKGDFKVGIRIASEEEPKFEFYTSRLGI 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + V++ + I + + + + +L+ + Sbjct: 198 GYKNIVPFYENQIKNNEKVELKMLHFFINTGMRDNAYYWNELLKCLKVYTRLKKICPTLD 257 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGIL 286 +++GGG I +I+Q + I E G F V + G Sbjct: 258 SLNIGGGFPIKNSLAFEYDYQYMVDEIINQIKITCEEEGVSVPHIFTEFGSFTVGESGGA 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +++ K+ D+ + + P + + + + + G C+ Sbjct: 318 IYEILYQKQQNDREKWNMINSSFITTLPDTWAISKRFIMMAINRWNDTYERVLLGGLTCD 377 Query: 347 TGD-----------FIALNRKIALPRPGDLLYIEKTGAYGAVQSG----TYNSRLLIPEI 391 + D ++ +K + TGAY G + I Sbjct: 378 SDDYYNSEQNMNAIYLPRYKKEQPL----YIGFFNTGAYQESIGGFGGLQHCLVPSPKHI 433 Query: 392 MVNGSQ-----FHIIRPRMTFQELI 411 +++ + + + T ++L+ Sbjct: 434 LIDKDKDGNCTTRLFSEQQTSEQLL 458 >gi|331236585|ref|XP_003330951.1| ornithine decarboxylase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309309941|gb|EFP86532.1| ornithine decarboxylase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 525 Score = 99.1 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 105/269 (39%), Gaps = 15/269 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + YL + A G +A+K N + V+K LA LG+G D S E+ Sbjct: 64 FYVCDLAYVYRQYLRWQEAL-GNRVEPFFAVKCNPDSLVLKLLAQLGTGFDCASHAEIEM 122 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+++ K + A G+ +++ EL+ + + + I Sbjct: 123 VLKLGVEPSRIIYANPCKAGSFVRHAHAKGVQMMTFDNQDELEKVAKFHPNARMVLRIL- 181 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + +KFG P+ + L A L + GV H+GS Sbjct: 182 ---------TDDSGSLCRLGEKFGAPLENVRGLLERAKELDVA-VIGVAFHVGSGCSNPL 231 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A + + + G + +DVGGG G + + L + Sbjct: 232 LYTDAVGRAKWTFELGQELGFHFDFLDVGGGFG---DDNFDLLAEGLLVGLDKYFPVGCG 288 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSA 297 ++I EPGR+ V L T +I+ +K+ Sbjct: 289 VRVIAEPGRYFVTRAFELATNIIARRKAP 317 Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 8/77 (10%) Query: 334 LHIHADIVGPICETGDFIALNRKIA--LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 I GP C++ D ++ + GD L GAY + +N + + Sbjct: 442 ELELCKIFGPSCDSIDLVSPATLLPTNRLLVGDWLRWPNMGAYTICAASQFNGFKISQVV 501 Query: 392 M------VNGSQFHIIR 402 V+ HI+R Sbjct: 502 YTIGDPSVDEKVRHILR 518 >gi|261749633|ref|YP_003257319.1| arginine decarboxylase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497726|gb|ACX84176.1| arginine decarboxylase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 463 Score = 99.1 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 55/446 (12%), Positives = 127/446 (28%), Gaps = 41/446 (9%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLTFSNAFDGM--------DT 53 F L + L + TP + Y I KN F+ Sbjct: 19 EFSLKNDLLEFHGIPLMNIIQKYGTPLKFTY-LPKISKNIQKARKWFEKAIHSNKYNNKY 77 Query: 54 MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K++ V++ ++ ++ + V + Sbjct: 78 TYCYCTKSSHFSFVLEEALKNNISIETSYAYDIEIVKNLYQKGKTNKDIEVICNGFKTHN 137 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 +++ Y N + + L+ I + I A+ + Sbjct: 138 YIENISYLINNGFYNTIPILDNSDELEKLSFFIHYPFKLGIRIASEEEPKFEFYTSRLGI 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 I P V++ + I + I + + +L+ + Sbjct: 198 GYKDIIVFYLNKIKNNPKVELKMLHFFINTGIKDTAYYWNELFKCLHIYAKLKKIAPELD 257 Query: 233 HIDVGGGLGI---AYHSDHRPPSSSDYASLIHQYFGNLQ---CKIILEPGRFLVADVGIL 286 +++GGG I +++ I ++ I E G + V + G + Sbjct: 258 ILNIGGGFPIKTSMSFKYDYEYMTNEIVYQIKKFCQEENISEPHIYTEFGAYTVGESGGI 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +++S K+ D+ + + P + + + + + G C+ Sbjct: 318 IYRILSQKRQNDREKWNMIDSSFMTTLPDTWAISRRFIMMAINRWNDSYERVFLGGLTCD 377 Query: 347 TGD-----------FIALNRKIALPRPGDLLYIEKTGAYGAVQSG----TYNSRLLIPEI 391 + D ++ R+ + TGAY SG + I Sbjct: 378 SDDYYNSEQHMNAIYLPRFRENPPL----YIGFFNTGAYQDTISGYGGVHHCLIPQPIHI 433 Query: 392 MVN-GSQFHII----RPRMTFQELIE 412 +++ Q ++ R +E+++ Sbjct: 434 LIDHDDQKKLVYKIFRHSQNPKEILK 459 >gi|170049413|ref|XP_001855919.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167871260|gb|EDS34643.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 346 Score = 99.1 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 64/303 (21%), Positives = 113/303 (37%), Gaps = 19/303 (6%) Query: 14 ENVSLEKLAHVV-QT-----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 V++ + + T PFY I + + + + YA+K N + V Sbjct: 16 GQVNVPAIIDELTGTLSNEEPFYVMDIGDIVRKHQNWIEKMPR--VVPHYAVKCNDAEVV 73 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 TLA LG+ D S+GE+ + L V ERI+F+ K + A + + +S+ Sbjct: 74 CSTLAALGASFDCASKGEISKILGLGVAPERIIFANPMKPSSHLRYANANNVKTMTFDSD 133 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 +EL + + I KFG + Sbjct: 134 TELHKIRKLCPDAKLVLRIRCEAEKA----------QCPLGKKFGCDPVEEAPRLIKIVR 183 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 + + G+ H+GS ++KA RDL + G+ + +D+GGG + Sbjct: 184 SLDMDLVGISFHVGSGCADFPVYYKAISYARDLFDYAATLGYELNLLDIGGGFPGDVGTS 243 Query: 248 HRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 + S + ++F + ++I EPGR+ VA L+T V S + + +D Sbjct: 244 IDEVAMI-VNSALDKFFPDKSVRVISEPGRYYVASAFTLITCVQSKRVCLNAKTGTIDRM 302 Query: 308 MND 310 M Sbjct: 303 MYY 305 >gi|195453356|ref|XP_002073752.1| GK14274 [Drosophila willistoni] gi|194169837|gb|EDW84738.1| GK14274 [Drosophila willistoni] Length = 812 Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 124/305 (40%), Gaps = 20/305 (6%) Query: 96 AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN 155 ERI+F+ + I ++ + Q ++ V++E E+ L++ N + Sbjct: 504 PERIIFANPCRPISHVEYSRQQKVFDVTVDNEFEVYKLHKHYS----------NSNLILR 553 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFK 215 + K + DKFG + + + +K++G H+GS + ++ +A Sbjct: 554 FKSEAKAAKCPLGDKFGCDPNVNAAALLLLAKALDLKVTGSSFHVGSGCSEFAAYDRAIG 613 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEP 275 + + + GH + +D+GGG A + ++ + + F + +II EP Sbjct: 614 KAKQIFDFGKLIGHKMSLLDIGGGFPGANDEEFEKIAN-VVNQSVERDFPDPGIQIISEP 672 Query: 276 GRFLVADVGILVTKVISIKKSADKT--------FVILDVAMNDFMRPTLYDAYHEINYIV 327 GRF V L+ K+ + ++ + + D F Y+ + ++ + Sbjct: 673 GRFFVESAFTLICKIHAKREVRHPNNGKLELIMYYLNDGVFGSFNNVISYNEFVLPHHYL 732 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 N + + + GP C+ D I+ + + + GDL+ GAY + +N Sbjct: 733 NRSKPVPLYKSLLWGPTCDAVDKISEHIFLPHLKLGDLIGFHNMGAYTFPIACEFNGF-K 791 Query: 388 IPEIM 392 +P+I+ Sbjct: 792 VPKIL 796 >gi|298206695|ref|YP_003714874.1| putative arginine decarboxylase [Croceibacter atlanticus HTCC2559] gi|83849326|gb|EAP87194.1| putative arginine decarboxylase [Croceibacter atlanticus HTCC2559] Length = 486 Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 53/447 (11%), Positives = 120/447 (26%), Gaps = 41/447 (9%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 FK + +L + L KL P + Y I N F A + Sbjct: 19 EFKLNKNNLEFHGIDLMKLISEYGAPLKFTY-LPKISDNINRAKEWFRVAMKEHNYKGKY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA----ERIVFSGVGKTID 109 CY K++ Q V+ ++ S ++ + + V K Sbjct: 78 HYCYCTKSSHFQYVLHEALKNDIHIETSSAFDIDIVESLKEQGKIKNDTFVICNGFKRDQ 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 ++ + + + + T + Sbjct: 138 YLENIARLINNGHENCIPVIDNYEELNLLGDVITKKYNIGIRIASEEEPKFEFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + + P V + + I + I + + L+ Sbjct: 198 GYKN---IVPFYNNQIKDNPQVNLKMLHFFINTGIRDTAYYWNELVKCLKVYVSLKKICP 254 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADV 283 + +++GGG I + +I+Q I E G F V + Sbjct: 255 TLDSLNIGGGFPIKNSLAFEYDYQYMISEIINQIKQVCDEADVPVPNIFTEFGSFTVGES 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G + +V+ K+ D+ + + P + + + + + G Sbjct: 315 GGAIYEVLYQKQQNDREKWNMINSSFITTMPDTWAINKRFVMLAVNRWNEEYERVLLGGL 374 Query: 344 ICETGDFI-----ALNRKIALPRPGD---LLYIEKTGAYGAVQSG----TYNSRLLIPEI 391 C++ D+ + + D + TGAY G + + Sbjct: 375 TCDSDDYYNSEQHMNAIYLPKYK-KDKPLYIGFFNTGAYQETIGGFGGLHHCLIPQPKHL 433 Query: 392 MVNGSQ-----FHIIRPRMTFQELIEL 413 +++ + + + T ++++ L Sbjct: 434 LIDKDEEGNITTSVFSEQQTSEQMLSL 460 >gi|158312520|ref|YP_001505028.1| diaminopimelate decarboxylase [Frankia sp. EAN1pec] gi|158107925|gb|ABW10122.1| Diaminopimelate decarboxylase [Frankia sp. EAN1pec] Length = 453 Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 81/416 (19%), Positives = 139/416 (33%), Gaps = 53/416 (12%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH---------------L 74 Y YS + +A+KAN+ ++ L Sbjct: 40 YLYSPAVAAARAAELRRHLPDW-AELLFAVKANAFPPILDALLAGTASTDAGTAAGAGAG 98 Query: 75 GSGLDIVSEGELRRALAAPVP----------------AERIVFSGVGKTIDEID------ 112 G ++ S EL A AA R+V SG GK++ + Sbjct: 99 IDGFEVSSAHELVLAAAAVERARQRGAVRAAGQHPSGGARLVASGPGKSVSLLRALLGAV 158 Query: 113 --LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 + N ES EL+ ++ A G++A +A RVNP + G + Sbjct: 159 PVEGAVPAVDVVNAESPLELRRIDAVAAETGRRAAVALRVNPA-RVGLSGSLRMGGRPTA 217 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 FGI + + A +LP + + G +H S + + D + G Sbjct: 218 FGIQERDVPAAVELARSLPWIDLVGFHVHAVSGNLDATAHLDYVRWCLDFAVRQARLGDV 277 Query: 231 IQHIDVGGGLGIAYHSDHR----PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 + GG R P + + + Q +++ EPGR LVAD G Sbjct: 278 DLRVVDVGGGLGVPFEPDRLGERPFDLDVFGAGLDQLRPPTGVRVVFEPGRALVADCGWY 337 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG-------DRLHIHAD 339 +V +K F +L ++ F PT ++ H + + Sbjct: 338 AAEVTDVKLVHGGAFAVLRGGIHHFQLPTSWEIVHNFAVVPRDDWLPGWPRPEVAAGPVT 397 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVN 394 +VG +C D +A + + R GD++ GAYG + + ++V+ Sbjct: 398 VVGELCTPEDTLARDVTVDRLRAGDVVVFPMAGAYGYEFAMHEFLGHPRAHRVVVD 453 >gi|322510630|gb|ADX05944.1| putative ornithine decarboxylase [Organic Lake phycodnavirus 1] Length = 370 Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 64/374 (17%), Positives = 131/374 (35%), Gaps = 34/374 (9%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT----LAHLGSGLDIVSEGE 85 + Y + + ++ + YA+K N + ++KT + + GL + S E Sbjct: 22 WIYDEKNVLRQIEQWNKQLPWI--RPYYAMKCNPSYDLLKTLTTRMKYNNIGLCVASLQE 79 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 A++ + + I + FN + T+ + +G+ Sbjct: 80 FLL-------AQKYTHNIIYTNPHMILYEKKHLFKLFNQNCFKVVDTMEELEQFIGRNVN 132 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + ++N + + KFG + + L YA + I GV +HI S+ + Sbjct: 133 VLIKMN------SCNHNINSSLDTKFGCTSPEAYELIHYAKQH-NINIRGVSVHIESKSN 185 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQH-IDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 +S+ A+K ++ + + L + + I GG + + + Y Sbjct: 186 CKQSYIDAYKYVKQILEYLSMSCVYPEQPILDIGGGLLYNTNLEEVLGWTKYIHY----- 240 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 +II E GR+ L+T++I+ + + +N + R Sbjct: 241 -----EIIAETGRYYAEPSYHLLTEIIAKTRRGIFLDNGIYHELNVYHRDHWEFPKLAYY 295 Query: 325 YIVNPAGDRLHIHA---DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 Y + I GP C++ D + + GD +++E GAY S Sbjct: 296 YDHEKDSLEKVMEYEDTRIFGPTCDSYDHMGICSFPKDYNMGDHIFLENMGAYTNAGSCN 355 Query: 382 YNSRLLIPEIMVNG 395 +N L ++ N Sbjct: 356 FNGILGASCVLFNK 369 >gi|52352395|gb|AAU43684.1| lysine/ornithine decarboxylase [uncultured archaeon GZfos26D8] Length = 425 Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 126/360 (35%), Gaps = 28/360 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TPF+ + K F V Y +KAN + V+K + L ++ + Sbjct: 82 TPFFIFRKEEFRK----LFKHFSQFG-KVFYPVKANDHIEVLKAVDALSGCFEVDGIYHI 136 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 R L+ V E++ FS K + + AL+ G+ F +++E E + Q ++ + Sbjct: 137 ERLLSIGVSPEKLQFSIPIKKPNGVKKALKYGVNRFIIDTEEEYLKIRQNRKNIQFIIRV 196 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + A+ + + A G G+ ++ +I Sbjct: 197 SI-------ADILNIKEVCYHKWGI---PIKKAIELANIIENDGSHFLGISFYLSQEIFN 246 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 E+F + + G ++ +D+GGGL SS+ + + Sbjct: 247 YENFSTVLDCIAKNFK-----GRSLSVLDIGGGLD-------DSFSSNFHNKIKEIKESL 294 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR-PTLYDAYHEINY 325 II+EPGR L+ +V VI K D + +D + + + D EI+ Sbjct: 295 NIDTIIVEPGRNLLDPCIDMVVSVIGTAKRGDNMWAYIDAGIYSGLLDYVIKDKVFEISI 354 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 + + GP + DF+ GD L I+ GAY V + Sbjct: 355 LDRTEPSSKTYKYLLSGPTSDALDFLGEYSFKKQLNAGDKLIIKNCGAYTFVLGTHFGGF 414 >gi|219363513|ref|NP_001137051.1| hypothetical protein LOC100217223 [Zea mays] gi|194698164|gb|ACF83166.1| unknown [Zea mays] Length = 168 Score = 98.7 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 8 EGSLHAENVSLEK-LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L+ E V +E +A ++PFY YS I +N+ + +A G+ ++V YA+KAN+N Sbjct: 72 DGYLYCEGVRVEDAMAAAERSPFYLYSKLQILRNFAAYRDALQGLRSIVGYAVKANNNLP 131 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 V++ L LG G +VS ELR AL A R Sbjct: 132 VLRVLRELGCGAVLVSGNELRLALQAGFDPARCGSCS 168 >gi|332663150|ref|YP_004445938.1| Orn/DAP/Arg decarboxylase 2 [Haliscomenobacter hydrossis DSM 1100] gi|332331964|gb|AEE49065.1| Orn/DAP/Arg decarboxylase 2 [Haliscomenobacter hydrossis DSM 1100] Length = 469 Score = 98.7 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 55/391 (14%), Positives = 109/391 (27%), Gaps = 24/391 (6%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYAL 59 +G L V L L TP I N F CY Sbjct: 27 DGYLVFNGVPLMYLIEKYGTPLKLTYLPKIGAQIKKARNLFTRAMKSLNYNGKYQYCYCT 86 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 K+N +++ + L+ S ++ V + D Q + Sbjct: 87 KSNHFSYILEEVIKHDVQLETSSAFDIDLIRKLYKKGLIDKNITVVCNGFKPDHYKQRIV 146 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI-PIHQI 178 + E+ + + + I I T ++ + + GI + Sbjct: 147 DLIHDGFENVIPVCDNIQEIEYYEQHIQGVCKIGIRVATEEEPNFEFYTSRLGIRNSDVL 206 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 P K++ + + + I + + L LR ++ +++GG Sbjct: 207 PFFNEKIKNNPKFKLTLLHFFVDTGIKDSLYYWGELRKAVRLYAHLRRESEDLGILNIGG 266 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKII------LEPGRFLVADVGILVTKVIS 292 G+ I ++ Q + I E G++ V + G + V++ Sbjct: 267 GMPIRNSLGFEFDYKYMIKEIVKTILQACQKEQIPEPDLFTEFGKYTVGESGAALFSVLA 326 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K+ D + P ++ + + +I G C+ D+ Sbjct: 327 QKQQNDAERWYMIDNSLMTTLPDVWGIGERFILLPINKWYNEYQRVNIGGLSCDNSDYYN 386 Query: 353 LNRK-----IALPRPGD----LLYIEKTGAY 374 + G+ L TGAY Sbjct: 387 AEVNQAQVYLPTFENGEPEPLFLGFFHTGAY 417 >gi|262274406|ref|ZP_06052217.1| carboxynorspermidine decarboxylase putative [Grimontia hollisae CIP 101886] gi|262220969|gb|EEY72283.1| carboxynorspermidine decarboxylase putative [Grimontia hollisae CIP 101886] Length = 380 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 124/388 (31%), Gaps = 26/388 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 ++TP++ + +N + + ALK S V + G Sbjct: 5 ELKTPYFLIEEDKLIENLEKAKRLKELSGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGP 64 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E++ E +S D D+A FN +S L + K Sbjct: 65 FEVKLGYE-TFGGETHAYSVGYSEDDVRDVADICDKMIFNSQS-----QLTAYRHLVEGK 118 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 A I R+NP ++ P + L + + + ++ + Sbjct: 119 ASIGLRLNPGVS----------YAGQDLANPARRFSRLGVHFDQIDPGIFATLNGVMFHM 168 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + LL ++++ S + ++ + +GGG+ + A+ + + Sbjct: 169 NCENKDVDAFTSLLDAISEKFGSYLNQLEWVSLGGGVFFTWPG----YDLEKLAAALKAF 224 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 225 GERHGVQLYLEPGEAIITKTTDLVVTVVDIVENEVKTAIVDSATEAHRLDTLIYN----E 280 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + A D I C GD + + G L+I + Y V+ +N Sbjct: 281 PASIAEANDTGEHTYVIGSCSCLAGDQFCVANFDHPLKVGQRLHIMDSAGYTMVKLNWFN 340 Query: 384 SRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 + + ++ +Q+ Sbjct: 341 GLRMPSVYCRRSNGKIQLLNE-FDYQDF 367 >gi|218679894|ref|ZP_03527791.1| diaminopimelate decarboxylase protein [Rhizobium etli CIAT 894] Length = 69 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 41/61 (67%), Positives = 51/61 (83%) Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELDSIPAW 419 P+PGDL+ + GAYGAVQ+GTYNSRLL+PE++V GS FH+IRPR T+ ELI LDS+P W Sbjct: 8 PKPGDLIAVSTAGAYGAVQAGTYNSRLLVPEVLVKGSDFHVIRPRRTYAELISLDSVPTW 67 Query: 420 L 420 L Sbjct: 68 L 68 >gi|260060980|ref|YP_003194060.1| arginine decarboxylase [Robiginitalea biformata HTCC2501] gi|88785112|gb|EAR16281.1| arginine decarboxylase [Robiginitalea biformata HTCC2501] Length = 487 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 52/395 (13%), Positives = 110/395 (27%), Gaps = 24/395 (6%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMD----T 53 F L VSL L +P + Y I +N F+ A + D Sbjct: 19 EFDLEGDRLRFHGVSLTDLIERYGSPLKFTY-LPKISQNINRAKDWFAEAMEKHDYPGKY 77 Query: 54 MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K++ + V+ ++ S ++ + V + + Sbjct: 78 YYCYCTKSSHFRYVLHEALKNDIHIETSSAFDIDIVENLKAQGLISDRTYVICNGFKREA 137 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 + + N + + ++ I I A+ + Sbjct: 138 YVDNIGRLINEGHRNCIPIIDNYEELSLLDEVIDQPFKVGIRIASEEEPKFEFYTSRLGI 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + V++ + I + I + + +L+ ++ Sbjct: 198 GYKDIVPFYENQIRDNDKVELRMLHFFINTGIRDNAYYWNELNKCLKVYVRLKKLCPSLD 257 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL------QCKIILEPGRFLVADVGIL 286 +++GGG + + +++Q I E G F V + G Sbjct: 258 SLNIGGGFPTKNSLSFQYDYAYMVDEIVNQIKLTCEEGDVPPPNIFTEFGSFTVGESGGA 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 V KV+ K+ D+ + + P + + D + + G C+ Sbjct: 318 VYKVLYQKQQNDREKWNMIDSSFITTLPDSWAINKRFIMLSVNRWDDPYERVLLGGLTCD 377 Query: 347 TGDFI-----ALNRKIALPRPGD--LLYIEKTGAY 374 + D+ + G + TGAY Sbjct: 378 SDDYYNSQQDMNAIYLPKFHSGKPLYIGFFNTGAY 412 >gi|323494766|ref|ZP_08099865.1| carboxynorspermidine decarboxylase [Vibrio brasiliensis LMG 20546] gi|323310959|gb|EGA64124.1| carboxynorspermidine decarboxylase [Vibrio brasiliensis LMG 20546] Length = 377 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 112/369 (30%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + +N + + ALK S V + G Sbjct: 4 NELKTPYFMIDEDKLVENLEKAKLLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++A FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVREVADICDKMIFNSQS-----QLAAYRHIVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA + R+NP ++ P Q L A + +D + Sbjct: 118 KASLGLRLNPGVS----------YAGQDLANPARQFSRLGVQADHIKPQVFEDIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL +++Q + + +GGG+ + + Sbjct: 168 MNCENKDVDAFIALLDSISEQFGQYLDKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +YD Sbjct: 224 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYDEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I A ++ I C GD G L+I + Y V+ + Sbjct: 284 IL----EASEKGEHQYVIGSCSCLAGDQFCEANFDQPLEIGQRLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEI 391 N + Sbjct: 340 NGLRMPSVY 348 >gi|226823225|ref|NP_001017568.2| ornithine decarboxylase antizyme inhibitor [Danio rerio] Length = 454 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 67/399 (16%), Positives = 133/399 (33%), Gaps = 41/399 (10%) Query: 10 SLHAENVSLEKLAHVV--------QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 L + +L + ++ F+ I + + N D + Y +K+ Sbjct: 15 ELLEGSAALRDVIDKHIYDQTFAQKSAFFAADLGVIVQQQARWRNKMDQI--RPFYTVKS 72 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NS+ V++ LA LG+G ++ EL V ++ I+ G K + I A + I Sbjct: 73 NSSPVVVELLASLGTGFICSNKHELDLVKGFGVSSQDIILGGTCKQLSHIKYAAKHNIPL 132 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 ++E+E++ + + + + + FG + L Sbjct: 133 LVCDNEAEMRKIARCHPKAKVLLLLT----------SESCCEKEEMAIPFGSTLKDCRRL 182 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A+ ++++GV +I S ++E F +A R + G + +D+GGG Sbjct: 183 LECAAGELNLQVTGVKFNIPSCCQEVEKFSRAVSEARCVFDMGEELGFEMNILDIGGGFD 242 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + + L + + II EPG + V+ L +I K A Sbjct: 243 GSE-EQLDKVNQMLKPMLDMYFPRSTGLSIIAEPGAYYVSSAFTLAVNIIDKKTVARDCS 301 Query: 302 VILDVAMNDFMRPTLYDAYHEINY------------------IVNPAGDRLHIHADIVGP 343 A++ P ++ Y + + D + + GP Sbjct: 302 AQPHDALSANDEPEFLYHINDGVYGSFASKLLCEDSIATPLAHKHVSADEPLFSSSLWGP 361 Query: 344 ICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + D + + GD L GA + + Sbjct: 362 SEDDLDLVMERCLLPELSVGDWLLFRNAGA--SALGSAF 398 >gi|150025756|ref|YP_001296582.1| arginine decarboxylase [Flavobacterium psychrophilum JIP02/86] gi|149772297|emb|CAL43775.1| Arginine decarboxylase [Flavobacterium psychrophilum JIP02/86] Length = 464 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 53/447 (11%), Positives = 131/447 (29%), Gaps = 43/447 (9%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 F + +L + L KL TP + Y I N F NA + + Sbjct: 19 EFTLAKDNLEFHKIDLMKLVEQYGTPLKFTY-LPQISSNIKRAKAWFRNAMEKNNYEGKY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K++ + ++ ++ S ++ + + V + D Sbjct: 78 YYCYCTKSSHFEYIMNEAFKNNIHIETSSAFDIDIVENLLQNGKINKSTYVICNGFKRDQ 137 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 +++ N ++ + ++ +A I + I A + Sbjct: 138 YIENIARIINNGHKNTIPIIDNYEELDLLQAEIKGKFKIGIRIAAEEEPKFEFYTSRLGI 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + +++ + I + I+ + + L+ + Sbjct: 198 GYKNIVQFYRKQIQENDKLELKMLHFFINTGINDNAYYWNELVKCIKVYISLKKECPTLD 257 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGIL 286 +++GGG I +I+Q + I E G F V + G Sbjct: 258 GLNIGGGFPIKNSLTFEYDYQYMIDEIINQIKIACEEAEVDVPNIFTEFGSFTVGESGGA 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +++ K+ D+ + + P + + + + + G C+ Sbjct: 318 IYQILYQKQQNDREKWNMIDSSFITTLPDTWAINKRFIMLAINRWNDQYERVLLGGMTCD 377 Query: 347 TGDFIALNRKI------------ALPRPGDLLYIEKTGAYGAVQSG----TYNSRLLIPE 390 + D+ + + L + TGAY G + Sbjct: 378 SDDYYNSEQNMNAIYLPKYNKEKPL-----YIGFFNTGAYQETIGGYGGLHHCLIPQPKH 432 Query: 391 IMVNGSQ-----FHIIRPRMTFQELIE 412 I+++ + I + +++++ Sbjct: 433 ILIDKDENGIIATEIFSEQQKAEDVLK 459 >gi|294953653|ref|XP_002787871.1| Ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983] gi|239902895|gb|EER19667.1| Ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983] Length = 470 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 70/446 (15%), Positives = 124/446 (27%), Gaps = 85/446 (19%) Query: 12 HAENVSLEKLAHVVQTP---FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 + +L LA P +E + + YA+K N ++ Sbjct: 29 YVAGEALRDLAD----PDVSVMLLDLGQLEHQMRRWKDLLPR--VTPYYAVKCNPEPMLV 82 Query: 69 KTLAHLGSGLDIVSEGEL--------------RRALAAPVPAERIVFSGVGKTIDEIDLA 114 KTL LG D + E+ + A +V++ K ++ A Sbjct: 83 KTLYRLGCKFDCATINEMRLVRNILSDDIGTTEGFDVHEMMASHVVYANPTKLPSQLVGA 142 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 G+ +S SE+ + +A + KFG Sbjct: 143 RDLGVEYLVADSASEIAKIAHHHPKAKLLLRLAC----------VDNNAQCPMSAKFGAS 192 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + ++ + GV + GV H+GS + S KA R++ S + Sbjct: 193 LGVTVTVLLEEAMKHGVNVVGVSFHVGSGCSDVHSITKALVDAREVFDAAASRYGLRLSV 252 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQ-----YFGNLQCKIILEPGRFLVADVGILVTK 289 GG + P + A++++ + ++I EPGR+ LVTK Sbjct: 253 LDIGGGFQGVDREGSPVAFKSMATVVNSLLDTLFPDPDDVQVIAEPGRYFACSPCSLVTK 312 Query: 290 VISIK----------------------------------------KSADKTFVILDVAMN 309 + S T + L+ + Sbjct: 313 IYSKNVVVSAPKLSEMKSAADIAEEDTMDSGSSSSSASVDELAGKNLTSLTRLYLNDGVY 372 Query: 310 DFMRPTLYDAYHEINYIVNPAG------DRLHIHADIVGPICETGDFIALNR-KIALPRP 362 LYD ++ + + GP C+ D I + Sbjct: 373 GSFNCILYDHQQVWPEALHEESGVCGDPKVANPTHVLFGPTCDGFDTIMNGVTHLPEMEI 432 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLI 388 G L GAY + +N Sbjct: 433 GHHLLWRNMGAYTTAAATNFNGFDTP 458 >gi|238927648|ref|ZP_04659408.1| conserved hypothetical protein [Selenomonas flueggei ATCC 43531] gi|238884573|gb|EEQ48211.1| conserved hypothetical protein [Selenomonas flueggei ATCC 43531] Length = 84 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 342 GPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHI 400 G +CE D A++R + GD+L I TGA+G+ YN++L E++ + Sbjct: 3 GSLCENNDKFAIDRALPKIDIGDILIIHDTGAHGSAMGFNYNAKLHCAELLRRMDGSIEL 62 Query: 401 IRPRMTFQELIE 412 IR T + Sbjct: 63 IRRPQTIDDYFA 74 >gi|241607215|ref|XP_002405819.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215500690|gb|EEC10184.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 358 Score = 98.4 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 120/348 (34%), Gaps = 20/348 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ +E + G+ YA+K +++ V+ TL+ G D + E++ Sbjct: 29 FFVCDVRDLEHKVDLWRQELPGITP--FYAVKCSTDPVVLHTLSSRGVNFDCSNMSEIKM 86 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V +RIV++ K+ +D A + G+ + EL ++ + L + Sbjct: 87 VLEMGVSPDRIVYANTIKSSSHLDFASEHGVTLMTFDCMEELGKISDKNARLLLRIA--- 143 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI-SGVDMHIGSQIDQI 207 +++ S +KFG + + +L A + + + + I Sbjct: 144 ---------SNETGSGITMNNKFGCRLEEAGNLLQIARYMGFNVVGIAFHVGAAYRCPDI 194 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + A + + I G G+ H + ++ + + Sbjct: 195 FARSIAEARSVFNVGIRIGHPMTVLDIGGGFTGGLRSHDRLLKLCETIRVAVDEYFPASS 254 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 ++I EPG+F V L T+V++ ++ + N+ + + + Sbjct: 255 GVRVIAEPGQFFVTSAYTLATRVVAERRKDIEINGEFGQKYNEIKYTVCASGHAQPPHER 314 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 I + + G C D I + + + L ++ GAY Sbjct: 315 PCN-----ILSTVWGATCNPLDCILDKQPLFEVCVNEWLLMDNMGAYT 357 >gi|297579203|ref|ZP_06941131.1| carboxynorspermidine decarboxylase [Vibrio cholerae RC385] gi|297536797|gb|EFH75630.1| carboxynorspermidine decarboxylase [Vibrio cholerae RC385] Length = 387 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 52/391 (13%), Positives = 113/391 (28%), Gaps = 26/391 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L ++TP++ + N + + + ALK S V + G Sbjct: 12 LKDELKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTS 71 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E++ E +S D ++ FN +S+ Sbjct: 72 SGPFEVKLGYE-TFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRH------- 123 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 V ++ P Q L A + + ++ + Sbjct: 124 --------LVEGKVSLGLRINPGVSYAGQDLANPARQFSRLGVQADHIDEIVFDSINGVM 175 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + LL ++++ + + +GGG+ + + + Sbjct: 176 FHMNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVEKLGAAL 231 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 232 KAFAERHAVQLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEP 291 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + A D+ I C GD + + + G L+I + Y V+ Sbjct: 292 ASVL----EASDKGQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLN 347 Query: 381 TYNSRLLIPEIM-VNGSQFHIIRPRMTFQEL 410 +N + Q I +++ Sbjct: 348 WFNGLKMPSVYCERKNGQIQKINQ-FGYEDF 377 >gi|323342515|ref|ZP_08082747.1| putative diaminopimelate decarboxylase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463627|gb|EFY08821.1| putative diaminopimelate decarboxylase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 402 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 70/382 (18%), Positives = 134/382 (35%), Gaps = 8/382 (2%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 QTP++ +EKN TFSNA +++ Y++K NS V++ + ++VS+ Sbjct: 4 QTPYFLIDKEELEKNVNTFSNALQKYWPNSIFSYSVKTNSLPWVLEFMHSKKIRAEVVSD 63 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E + + ++IV++G K D+++ A G N++SE EL + + + Sbjct: 64 EEYQLSKLCGFSDDQIVYNGPIKGNDQLESA-LKGKAIINIDSEHELMYILENYHLVSDN 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + V I F ++ + + K G+ H+ S Sbjct: 123 IGVRVNVPTHIFKKEDIGYEEDGFRFGFSDETGRLEKVITDLKKVGISKF-GLHFHVNSV 181 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + K +++ + + + I G S + + Sbjct: 182 SRSNDVYSSISKYAKNIINKYQLDPSYIDIGGGFFGGLPTKPSAESYIA--TIREELEDV 239 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 K+I+EPG ++ L + V+ +K++ + V D + Y Sbjct: 240 VDINTTKLIIEPGSAIIGSCVELYSSVLDLKETQNVEIVTTDASRLHIDPLWKKQNYFYR 299 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + I G C D I K GD + EK GAY G + Sbjct: 300 IKKMGNESLNSGKDKLICGYTCMDHDRIMKLDKEVSVAAGDQIIFEKVGAYSITLGGPFI 359 Query: 384 SRLLIPEIMVNGSQFHIIRPRM 405 P+++V ++I Sbjct: 360 RYY--PKVLVKEENDYLIVRDE 379 >gi|320167076|gb|EFW43975.1| ornithine decarboxylase 1 [Capsaspora owczarzaki ATCC 30864] Length = 476 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 110/271 (40%), Gaps = 17/271 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + Y + A +D YA+K N ++ ++K LA LG+G D S+ E+ Sbjct: 48 PFYIIDVGQVARKYDQWVAALPRVDP--FYAVKCNGDKTILKLLAKLGTGFDCASKAEMD 105 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L VPA+RI+++ K + A Q+ + ++E EL + + + + Sbjct: 106 TVLKMGVPADRIIYAHPCKMASHVKFASQNNVRMMTFDNEHELHKMKELYPNARLVLRVL 165 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 T S KFG + ++ + A L + + GV H+GS Sbjct: 166 ----------TDNSRSICNLGLKFGAALARVPHMLQLAKDLE-LDVVGVSYHVGSGCFDA 214 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG-- 265 ++F A + + + G +D+GGG + + + + + + Sbjct: 215 QAFADAVAVAKTVFNIGAELGFKFNLLDLGGGFPGSDNVNVKFDDIASVLRVALDKHFPA 274 Query: 266 --NLQCKIILEPGRFLVADVGILVTKVISIK 294 N II EPGR+ V+ L V++ + Sbjct: 275 AENKDLHIIAEPGRYFVSASHTLAVSVVAKR 305 Score = 89.9 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 338 ADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ 397 I GP C++ D I ++ GD LY E GAY S T+N +M S+ Sbjct: 412 CSIWGPTCDSMDCITKTGRLPELAIGDWLYFEDMGAYTVAASSTFNGFPKPK-LMYVNSE 470 Query: 398 FH 399 H Sbjct: 471 SH 472 >gi|315637685|ref|ZP_07892890.1| carboxynorspermidine decarboxylase [Arcobacter butzleri JV22] gi|315478032|gb|EFU68760.1| carboxynorspermidine decarboxylase [Arcobacter butzleri JV22] Length = 382 Score = 98.0 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 108/387 (27%), Gaps = 22/387 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y +EKN D D + ALK + + G Sbjct: 12 EKLPSPAYVCEEELLEKNLKLLKRVQDEADISILLALKGFAMHSTFDLCKKYLKGCCASG 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E A + E + D + + N + L + Sbjct: 72 LHE------AILAKEEFGGEVHTYSPAFKDEEIDEIVAISNHLVFNSFSQLKRFKDKAYG 125 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 K + R+NP+ ++ + + G I + + + L G + Sbjct: 126 KVSLGIRLNPEYSSVEVDLYNPCAPYSRMG--ITKANFDESQLQFLDGFHFHALCEQ--- 180 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + L+ + ++ ++ GGG I Sbjct: 181 ------NVDALEGALKAFEKNFSQYFDRLKWVNFGGGHHITRADYDVEGLIKLL---KDF 231 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 K+ +EPG + G LV V+ I + + + + P + Sbjct: 232 KSRYPHLKVYMEPGEAIGWQTGYLVATVLDIVHNG--MDLAILDTSAEAHMPDTLAMPYR 289 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + G C +GD I + GD + +E Y V++ T+ Sbjct: 290 AMIRNSGLANEKPYTYRFGGNTCLSGDIIGDYSFDEPLKVGDKIILEDMIHYTMVKTTTF 349 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQE 409 N L ++ N + I + + Sbjct: 350 NGIKLPSIVIKNKENSYKIVKNFGYND 376 >gi|260778833|ref|ZP_05887725.1| carboxynorspermidine decarboxylase putative [Vibrio coralliilyticus ATCC BAA-450] gi|260604997|gb|EEX31292.1| carboxynorspermidine decarboxylase putative [Vibrio coralliilyticus ATCC BAA-450] Length = 377 Score = 98.0 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 113/369 (30%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + + +N + + ALK S V + G Sbjct: 4 NELKTPYFMINEDKLVENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D D+A FN ++ L + Sbjct: 64 PFEVKLGHE-TFGGETHAYSVGYSEDDVRDVADICDKMIFNSQN-----QLAAYRHIVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA + R+NP ++ P Q L A + +D + Sbjct: 118 KASLGLRLNPGVS----------YAGQDLANPARQFSRLGVQADHIDPEVFEDIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL +++Q + + +GGG+ + + Sbjct: 168 MNCENKDVDAFIDLLDSISEQFGHYLDKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 224 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I V D+ I C GD G L+I + Y V+ + Sbjct: 284 ILEAV----DKGEHEYVIGSCSCLAGDQFCEASFDKPLEIGQRLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEI 391 N + Sbjct: 340 NGLRMPSVY 348 >gi|153802246|ref|ZP_01956832.1| carboxynorspermidine decarboxylase [Vibrio cholerae MZO-3] gi|124122228|gb|EAY40971.1| carboxynorspermidine decarboxylase [Vibrio cholerae MZO-3] Length = 387 Score = 98.0 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 52/400 (13%), Positives = 116/400 (29%), Gaps = 26/400 (6%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 +++ + L ++TP++ + N + + + ALK S V + Sbjct: 3 TLQDIGINMLKDELRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDII 62 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G E++ E +S D ++ FN +S+ Sbjct: 63 KPYLDGTTSSGPFEVKLGYE-TFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAY 121 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 V ++ P Q L A + Sbjct: 122 RH---------------LVEGKVSLGLRINPGVSYAGQDLANPARQFSRLGVQADHIDES 166 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 ++ + + + LL ++++ + + +GGG+ + Sbjct: 167 VFDSINGVMFHMNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----Y 222 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + + ++ LEPG ++ LV V+ I ++ KT ++ Sbjct: 223 DVEKLGAALKAFAERHAVQLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHR 282 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + +Y + A D+ I C GD + + + G L+I + Sbjct: 283 LDTLIYKEPASVL----EASDKGQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQKLHILDS 338 Query: 372 GAYGAVQSGTYNSRLLIPEIM-VNGSQFHIIRPRMTFQEL 410 Y V+ +N + Q I +++ Sbjct: 339 AGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQ-FGYEDF 377 >gi|332519087|ref|ZP_08395554.1| Orn/DAP/Arg decarboxylase 2 [Lacinutrix algicola 5H-3-7-4] gi|332044935|gb|EGI81128.1| Orn/DAP/Arg decarboxylase 2 [Lacinutrix algicola 5H-3-7-4] Length = 465 Score = 98.0 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 57/443 (12%), Positives = 129/443 (29%), Gaps = 35/443 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 FK + L ++ L KL P + Y I N F+NA + D Sbjct: 19 EFKLEKNQLQFHDIDLMKLVEEYGAPLKFTY-LPQISNNIQRAKQWFANAIEKHDYKGTY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K++ + V+ ++ S ++ + + V + Sbjct: 78 NYCYCTKSSHFKHVLNEALTNNIHIETSSAFDIDIVENLKAEGKITNETFVISNGFKRAQ 137 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 + + N ++ + ++ A I N I A+ + Sbjct: 138 YVTNIARLINNGQKNCIPIIDNYEEIDLLSAEIKGNYNIGIRIASEEEPKFEFYTSRLGI 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + V + + I + I + + + L+ ++ Sbjct: 198 GYKNIVPFYKNKIQNNEKVNLKMLHFFINTGIRDNAYYWNELQKCLKVYTSLKKICPSLN 257 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGIL 286 +++GGG I +++Q + I E G F V + G Sbjct: 258 SLNIGGGFPIKNSLAFDFDYEYMVDEIVNQIKLTCEEEEVDVPNIFTEFGSFTVGESGGA 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +V+ K+ D+ + + P + + + + + G C+ Sbjct: 318 IYEVLYQKQQNDREKWNMINSSFITTLPDTWAINKRFIMLAINRWESSYERVLLGGLTCD 377 Query: 347 TGDFI-----ALNRKIALPRPGD---LLYIEKTGAYGAVQSG----TYNSRLLIPEIMVN 394 + D+ + D + TGAY G + I++N Sbjct: 378 SDDYYNSEQHMNAIYLPKYN-KDKPLYIGFFNTGAYQETIGGFGGLQHCLIPSPKHILIN 436 Query: 395 GSQ-----FHIIRPRMTFQELIE 412 + + + ++L++ Sbjct: 437 KDKDGNITTKLFSEQQKSEDLLK 459 >gi|289449867|ref|YP_003474367.1| carboxynorspermidine decarboxylase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184414|gb|ADC90839.1| carboxynorspermidine decarboxylase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 460 Score = 98.0 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 48/439 (10%), Positives = 98/439 (22%), Gaps = 55/439 (12%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA---NSNQAVI-------------- 68 +P + + N + + A KA S +I Sbjct: 19 PSPAFIIDEQLLTANLKKLHLVKEKTGCKILLAQKAFATFSTYPLIGQYLDGTTASGLYE 78 Query: 69 -KTLAHLGSG--LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV- 124 + G + S G + + + + ++ + + Sbjct: 79 ARLGHEEMPGREIHCFSPGFTKYEIGQLLDFTDHIVFNSFSQWLTFRDQIKFATHPVSCG 138 Query: 125 ----ESESELKTLNQRAVSLGKKAPIAFRVNPDINANT------HKKISTGKKEDKFGIP 174 SE+ T S + I D A ++ + Sbjct: 139 LRINPEYSEVATALYDPCSSSSRLGIRLNDFLDGAAKGLLEGIEGLHFHCLCEQGSDALL 198 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + S LP +K + D + + + Sbjct: 199 HTWEVVKRNFGSFLPKMKWINMGGGHHITKDDYDLDTLCSVIKDAQNSFGLTVYLEPGEA 258 Query: 235 D--------------VGGGLGIA----YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPG 276 V G + P + + Sbjct: 259 VALNAGFLKATVLDVVPSGDMPCAILDTSAACHMPDVLEMPYQPRVFPLYSSVMPSAASL 318 Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAM----NDFMRPTLYDAYHEINYIVNPAGD 332 + + K ++ K T N + AG Sbjct: 319 LPCTDNPREMSEKRLAAAKLPLGTLASPFGNEVENANAGSTADFPAGSAAGFAAGSTAGS 378 Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIM 392 + GP C GD I A PGD ++ Y V++ T+N L ++ Sbjct: 379 ASLYPYRLAGPTCLAGDVIGSYNFPAPLFPGDQVFFCDMAIYSMVKTNTFNGMPLPAIVL 438 Query: 393 VN-GSQFHIIRPRMTFQEL 410 + + ++R R ++ + Sbjct: 439 LQPDGKVTVLR-RFSYADF 456 >gi|73979727|ref|XP_532874.2| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 1 [Canis familiaris] Length = 331 Score = 98.0 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 82/253 (32%), Gaps = 18/253 (7%) Query: 158 THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 T + + KFG + L A L + + GV H+GS E+F +A Sbjct: 27 TDDSKAVCRLSVKFGATLKTSRLLLERAREL-NIDVIGVSFHVGSGCTDPETFVQAISDA 85 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEP 275 R + G N+ +D+GGG + + + + + + ++I EP Sbjct: 86 RCVFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRVIAEP 145 Query: 276 GRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 GR+ VA L + + + D F A+ Sbjct: 146 GRYYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAH 205 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + P D + I GP C+ D I + GD + E GAY + Sbjct: 206 VKPLLQKRPKPDEKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAAAS 265 Query: 381 TYNSRLLIPEIMV 393 T+N V Sbjct: 266 TFNGFQRPTIYYV 278 >gi|146300561|ref|YP_001195152.1| Orn/DAP/Arg decarboxylase 2 [Flavobacterium johnsoniae UW101] gi|146154979|gb|ABQ05833.1| Orn/DAP/Arg decarboxylase 2 [Flavobacterium johnsoniae UW101] Length = 467 Score = 98.0 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 53/447 (11%), Positives = 130/447 (29%), Gaps = 43/447 (9%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 FK + +L N+ L KL TP + Y I +N F A + Sbjct: 19 EFKLNKDNLLFHNIDLMKLVEQYGTPLKFTY-LPQISENINKAKSWFRKAMEKNKYEAKY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K++ + ++ ++ S ++ + + V + D Sbjct: 78 YYCYCTKSSHFEYIMNEAFKNNIHIETSSAFDVNIVENLLENGKINKSTYVICNGFKRDE 137 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 + + N ++ + ++ + I + I A + Sbjct: 138 YISNIARLINNGHKNTIPIIDNYEELDLLQGEIKGKFKIGIRIAAEEEPKFEFYTSRLGI 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + +++ + I + I+ + + L+ + Sbjct: 198 GYKNIVSFYKKQIQENDKLELKMLHFFINTGINDTSYYWNELVKCIKVYIALKKECPTLD 257 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGIL 286 +++GGG I +I+Q + I E G F V + G Sbjct: 258 GLNIGGGFPIKNSLAFEYDYQYMIDEIINQIKIACEEAEVDVPNIFTEFGSFTVGESGGA 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +++ K+ D+ + + P + + + + + G C+ Sbjct: 318 IYQILYQKQQNDREKWNMIDSSFITTLPDTWAINKRFIMLAINRWNDTYERVLLGGLTCD 377 Query: 347 TGDFIALNRKI------------ALPRPGDLLYIEKTGAYGAVQSG----TYNSRLLIPE 390 + D+ + + L + TGAY G + Sbjct: 378 SDDYYNSEQNMNAIYLPKYNKEKPL-----YIGFFNTGAYQETIGGYGGLHHCLIPQPKH 432 Query: 391 IMVNGSQ-----FHIIRPRMTFQELIE 412 I+++ + + + T ++++ Sbjct: 433 ILIDRDENGILATEVFSEQQTSDDVLK 459 >gi|310831136|ref|YP_003969779.1| putative ornithine decarboxylase [Cafeteria roenbergensis virus BV-PW1] gi|309386320|gb|ADO67180.1| putative ornithine decarboxylase [Cafeteria roenbergensis virus BV-PW1] Length = 354 Score = 98.0 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 64/336 (19%), Positives = 121/336 (36%), Gaps = 22/336 (6%) Query: 54 MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 YA+K+ NQ +K L+ G D S E+ +F+ K+I +I + Sbjct: 30 KPYYAIKSFQNQDFLKFLSKYDVGFDCASLEEINYVKDYNNSK---IFANPTKSIRDILV 86 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 A + I ++S E++ + + I + + ST + KFG Sbjct: 87 AKNNNINDIVIDSIEEIQKIQSINFNPNYIIRIT----------SDEIFSTIRFNKKFGA 136 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT-QQLRSNGHNIQ 232 ++ ++ Y S + + G H+GS+ + S + ++ + Q Sbjct: 137 YPDEVENIINYISD-NNLNLKGFSYHVGSKCSNMTSHVNSINIILNNYLPQCFYKNLTPN 195 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 ID+GGG ++ K+I EPGR + T++I+ Sbjct: 196 LIDIGGGFESDIQLLELNQKIQHLLPTLNNLNI----KLIAEPGRLFSQGAVEVETEIIA 251 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHE--INYIVNPAGDRLHIHADIVGPICETGDF 350 I++ L + +ND + + + + I I G C++ D Sbjct: 252 IRERIIDNIKTLYLTINDSVYHSFQGKIFDGQSFNPLPCYQSDELIRCFIFGQTCDSLDL 311 Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSR 385 I N + P+ GD + + GAY + +N Sbjct: 312 IVENCIMPYPKLGDKIIFKNMGAYSLASATGNFNGF 347 >gi|227500436|ref|ZP_03930498.1| diaminopimelate decarboxylase [Anaerococcus tetradius ATCC 35098] gi|227217499|gb|EEI82818.1| diaminopimelate decarboxylase [Anaerococcus tetradius ATCC 35098] Length = 392 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 67/387 (17%), Positives = 132/387 (34%), Gaps = 13/387 (3%) Query: 27 TPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TP++ ++KN + A + ++ + +++K NS +++ + G ++VS+ Sbjct: 10 TPYFIIYQDKLDKNIEDYKTALINEWPNSQLSFSVKTNSLPWLLEYIRDKGIFAEVVSKE 69 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E A I+F+G K D +L G E ++ + Sbjct: 70 EYLLAKRCGYKDNEIIFNGPIKNKDIFLDSLTMGATVNIDSKEELNFLFG---LNEQSRN 126 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I R+NP+ + K I+ +FG A + G+ +H S Sbjct: 127 NIGIRINPNPDIFEEKDIAYKNDGFRFGFSEETGELNRAISIVRGASDSVGLHIHCNSIT 186 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 E + + + ++ I G + S +++ + Sbjct: 187 RSKEVYIALANYAKKIIKKYDLKVSYIDIGGGFFGGIPGKTTAREYIS--VIKNVLSKVV 244 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 K+I+EPG ++ LVTKVI +K++ V D + Sbjct: 245 DINVTKLIIEPGSAIIGSCVDLVTKVIDVKETCRSRIVTTDGSRIHIDPLWA---KKSYV 301 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 Y + D I G C D + GD + + GAY G + S Sbjct: 302 YTLENKSDSNITKQIICGYTCMDHDRLMTIYNDKKLECGDKIIYHRVGAYSVTFGGMFIS 361 Query: 385 RLLIPEIMVNGSQ-FHIIRPRMTFQEL 410 P++ + S+ +R +++ + Sbjct: 362 YY--PDVYIKKSENIEKVRGKISVDDF 386 >gi|27366317|ref|NP_761845.1| carboxynorspermidine decarboxylase [Vibrio vulnificus CMCP6] gi|320156826|ref|YP_004189205.1| carboxynorspermidine decarboxylase [Vibrio vulnificus MO6-24/O] gi|27362518|gb|AAO11372.1| carboxynorspermidine decarboxylase [Vibrio vulnificus CMCP6] gi|319932138|gb|ADV87002.1| carboxynorspermidine decarboxylase putative [Vibrio vulnificus MO6-24/O] Length = 377 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 113/369 (30%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TPF+ + +N + + ALK S V + G Sbjct: 4 EQLKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++A FN +S L + Sbjct: 64 PFEVKLGYE-KFGGETHAYSVGYSEDDVREVADLCDKIIFNSQS-----QLAAHRHIVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA I R+NP ++ P Q L A + ++ + Sbjct: 118 KASIGLRLNPGVS----------YASQDLANPARQFSRLGVQADHIDPAVFDSINGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++++ + + + + +GGG+ + + Sbjct: 168 MNCENKDVDAFIALLDSISERFGAYLNKLDWVSMGGGVFFTWPG----YDVEKLGLALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ + ++ KT ++ + +Y Sbjct: 224 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + A + I C GD + + G L+I + Y V+ + Sbjct: 284 VL----EASENGEHEYVIGSCSCLAGDQFCVAKFDQPLHVGQRLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEI 391 N + Sbjct: 340 NGLKMPSVY 348 >gi|156975017|ref|YP_001445924.1| hypothetical protein VIBHAR_02739 [Vibrio harveyi ATCC BAA-1116] gi|156526611|gb|ABU71697.1| hypothetical protein VIBHAR_02739 [Vibrio harveyi ATCC BAA-1116] Length = 377 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 60/369 (16%), Positives = 115/369 (31%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP++ + + +N D + ALK S V + G Sbjct: 4 EQLKTPYFMINEDKLVENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++A FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVREVADICDKMIFNSQS-----QLAAYRHIVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA I R+NP ++ P Q L A + G+D + Sbjct: 118 KASIGLRLNPGVS----------YAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL +++Q + + + +GGG+ + + + Sbjct: 168 MNCENKDVDAFIGLLDSISEQFGEYLNKLDWVSMGGGVFFTWPG----YDTEKLGLALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 224 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I A + I C GD + G L+I + Y V+ + Sbjct: 284 IL----EASENGEHEYVIGSCSCLAGDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEI 391 N + Sbjct: 340 NGLRMPSVY 348 >gi|191012|gb|AAA36963.1| ornithine decarboxylase [Cricetus cricetus] Length = 293 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 74/218 (33%), Gaps = 14/218 (6%) Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + GV H+GS E+F +A R + G ++ +D+GGG + + + Sbjct: 23 NIDVIGVSFHVGSGCTDPETFVQALSDARCVFDMGTEVGFSMYLLDIGGGFPGSEDTKLK 82 Query: 250 PPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILVTKV------------ISIKK 295 + + + + ++I EPGR+ VA L + Sbjct: 83 FEEITSVINPALDKYFPPDSGVRVIAEPGRYYVASAFTLAVNIIAKKIVSKGSDDEDESS 142 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR 355 + + D F A+ + P D + + I GP C+ D I Sbjct: 143 EQTFMYYVNDGVYGSFNCILYDHAHVKPLLPKRPKPDEKYYSSSIWGPTCDGLDRIVERC 202 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GD + E GAY + T+N V Sbjct: 203 NLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPSIYYV 240 >gi|163757174|ref|ZP_02164275.1| diaminopimelate decarboxylase [Kordia algicida OT-1] gi|161322850|gb|EDP94198.1| diaminopimelate decarboxylase [Kordia algicida OT-1] Length = 140 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 6/141 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLG 75 L +A +P Y Y + I Y + AF + + YA+KA SN +++K + LG Sbjct: 5 DLLHIAETFGSPTYVYDASKITSQYERLTKAFAAVPKLKLHYAVKALSNLSILKLMKSLG 64 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD VS E++ LAA A I+++ G ++ EI+ A Q G+ + + Sbjct: 65 AGLDTVSIQEVQLGLAAGFDASEIMYTPNGVSLQEIEQAAQLGVKINIDNLS-----ILE 119 Query: 136 RAVSLGKKAPIAFRVNPDINA 156 + S P+ R+NP + A Sbjct: 120 QFGSKHPTIPVCIRINPHVMA 140 >gi|330821058|ref|YP_004349920.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia gladioli BSR3] gi|327373053|gb|AEA64408.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia gladioli BSR3] Length = 398 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 61/377 (16%), Positives = 115/377 (30%), Gaps = 15/377 (3%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI-KTLAHLGSGLDIVSEGE 85 TP Y Y Y + T + +LKAN + A++ + + G+++ S GE Sbjct: 21 TPCYVYDPQVALARYRALKA---RLGTRLVVSLKANPDPALLARCASGFEDGVELASRGE 77 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY-CFNVESESELKTLNQRAVSLGKKA 144 L + + + LA + I + + + A Sbjct: 78 LALVETCTELPRYLNNPSMDEDFMRAGLAARCRIVLDNLDAARRFVPLALESAAHGRPPE 137 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 I R+N A + FG+ ++ + + Sbjct: 138 AILLRLNAGALAGEQARPHWHDH---FGMTPNEAAAAVRALAAAGFAAAGLHVFAGPHSF 194 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + ++ ++L + L + + + ++ P + Sbjct: 195 ARQDASPADLRILPEALAALARDLAPLNGAPLTLLGLGGGFAETLAPEAMFDGYRAALAP 254 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH--- 321 + E GR + AD G VT+V+++K AD + + D ++ + Sbjct: 255 LAAAHTLTHEAGRAIFADAGWFVTRVVAVKHWADSSIAVCDGGLSHSFLLAQTELVMRRL 314 Query: 322 --EINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIALPRPGDLLYIEKTGAYGAV 377 I PAG + VG C D I + R P GDL + GAY Sbjct: 315 ASPILVRRTPAGVARAVPTLFVGSTCSRADVIGRDERRDAPPPHTGDLAVFPRCGAYHRT 374 Query: 378 QSGTYNSRLLIPEIMVN 394 S T+ + + Sbjct: 375 YSMTHFLSHQPAHVEIR 391 >gi|269963934|ref|ZP_06178245.1| carboxynorspermidine decarboxylase [Vibrio harveyi 1DA3] gi|269831334|gb|EEZ85482.1| carboxynorspermidine decarboxylase [Vibrio harveyi 1DA3] Length = 377 Score = 97.6 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 116/369 (31%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP++ + + +N + + ALK S V + G Sbjct: 4 EQLKTPYFMINEDKLVENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++A FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVREVADICDKMIFNSQS-----QLAAYRHIVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA I R+NP ++ + ++ + G+ A + G+D + Sbjct: 118 KASIGLRLNPGVSYAGQDLANPARQYSRLGV----------QADHIKPEIFDGIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++ Q + + + +GGG+ + + Sbjct: 168 MNCENKDVDTFIGLLDSISDQFGEYLNKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 224 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I A + I C GD + G L+I + Y V+ + Sbjct: 284 IL----EASESGEHEYVIGSCSCLAGDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEI 391 N + Sbjct: 340 NGLRMPSVY 348 >gi|54026837|ref|YP_121079.1| hypothetical protein nfa48630 [Nocardia farcinica IFM 10152] gi|54018345|dbj|BAD59715.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 489 Score = 97.6 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 72/410 (17%), Positives = 129/410 (31%), Gaps = 32/410 (7%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 L +A V TPF+ + + N F AF G+D V Y KAN V + A G Sbjct: 78 LADIAFAVGTPFHLLAPARVRANIAAFQVAFTTAGVDGYVYYGKKANKAACVARACAEQG 137 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G+D+ S GEL ALA V ++ +G K+ + + LA + G V++ EL+ + Sbjct: 138 AGVDVASVGELTAALAQGVRGPELMVTGPAKSDELLWLATRHG-AVVAVDAVDELERMVA 196 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + D + G I + + Sbjct: 197 AGFDTRVLLRV-LPPASDSRFGMTDEELDRALTLLAGTRIRLAGFSFHLGGYEASARAEL 255 Query: 196 VDMHIGSQIDQIESFHKAFKLLR----------DLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + + + H A + + G Y Sbjct: 256 AAVLVERCVRARAEGHAADTISIGGGFGVDYVPAQAWAAFTAAAGPAWFHAGKSFDSYYP 315 Query: 246 SDHRPPSSSDYASLIHQ-----YFGNLQCKIILEPGRFLVADVGILVTKVIS--IKKSAD 298 P ++ A ++ ++ +EPGR L+ G V V + + Sbjct: 316 YHFPVPGAAMLAEILRHGGLAELLRGNGIRLAIEPGRALLDRAGCTVFGVRGAKTRHAHG 375 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI-CETGDFIALNR-K 356 + + +L V + A + + VG C D ++ R Sbjct: 376 RPYRLLTVDGTSLSLSEQWFASEFLPDPLLWPTRPGAPTPTCVGATSCLESDMLSWRRIP 435 Query: 357 IAL-PRPGDLLYIEKTGAYGAVQSGT---YNSRLLIPEIMV---NGSQFH 399 + PGDLL T Y ++ + P++++ +G + Sbjct: 436 LPRAAEPGDLLVYPNTAGYQ--MDSNESAFHELPIPPKVVLHETDGGRLR 483 >gi|322800554|gb|EFZ21546.1| hypothetical protein SINV_13532 [Solenopsis invicta] Length = 306 Score = 97.2 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 109/309 (35%), Gaps = 17/309 (5%) Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + + V ERI+F+ K I + Q G+ V+SE ELK + I Sbjct: 1 MQVMKYDVQGERIIFAHPYKLPSHIKFSKQMGVEQMTVDSEFELKKIKNFFPKAKIVIRI 60 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 +KFG ++ + G+ + G H+G+ + Sbjct: 61 RCDAKKSS----------VSLGEKFGCEPYKEAVRLIRYTRDLGLNLYGFSFHVGTTCLE 110 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++++ + ++ + L +S G N + GG ++ + I Sbjct: 111 MDAYRRGIEICKQLIVIAKSIGCNNVELIDIGGGFLSVCGKELDELAEFINGAIENLDPG 170 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKT-----FVILDVAMNDFMRPTLYDAYH 321 + ++I EPGR+ V L + + S + + + ++ +N+ L Sbjct: 171 I--RVISEPGRYYVDSNFTLASYLHSKRLAISENGKLKRMYYMNCGVNNSFMEELKGVQA 228 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + ++ +++ GP + D I N + GD L + GAY V S T Sbjct: 229 RVPELIFEPMSNEKFLSNVWGPTADPHDLIVKNVSLPELYIGDWLVWKNMGAYTLVLSNT 288 Query: 382 YNSRLLIPE 390 +N + Sbjct: 289 FNGFPIPAV 297 >gi|325286965|ref|YP_004262755.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Cellulophaga lytica DSM 7489] gi|324322419|gb|ADY29884.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Cellulophaga lytica DSM 7489] Length = 467 Score = 97.2 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 52/442 (11%), Positives = 125/442 (28%), Gaps = 33/442 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLTFSNAFD--------GMDT 53 FK +L ++ L++L +P + Y I N N F Sbjct: 19 EFKLDGENLMFHDIPLKQLVEQYGSPLKFTY-LPKISDNISRAKNWFAIAMEKYQYKGKY 77 Query: 54 MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K++ + V+ + ++ S ++ + + V + D Sbjct: 78 HYCYCTKSSHFKPVLHEALNNNIHIETSSAFDINIVEHLKQEGKIKDDTYVICNGFKRDQ 137 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 + + N + + ++ I I A+ + Sbjct: 138 YITNIARLINEGHRNCIPIIDNYEEIDLLSNEINEDFKVGIRIASEEEPKFEFYTSRLGI 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + V++ + I + I + + +L+ ++ Sbjct: 198 GYKNIVPFYENQIRDNDKVQLKMLHFFINTGIKDNAYYWNELLKCLKVYVKLKKICPSLD 257 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGIL 286 +++GGG I +I+Q I E G F V + G Sbjct: 258 SLNIGGGFPIKNSLVFDYDYQYMIDEIINQIKLTCDEAGVDVPNIFTEFGSFTVGEAGGA 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +++ K+ D+ + + P + + + + + G C+ Sbjct: 318 IYEILYQKQQNDREKWNMIDSSFITTLPDTWAINKRFIMLPINRWNDEYERVLLGGLTCD 377 Query: 347 TGDFI-----ALNRKIALPRPGD--LLYIEKTGAYGAVQSG----TYNSRLLIPEIMVNG 395 + D+ + + + TGAY G + I++N Sbjct: 378 SDDYYNSEQHTNAIYLPKYKKNKPLYIGFFNTGAYQESIGGYGGLQHCLIPQPKHILINK 437 Query: 396 S-----QFHIIRPRMTFQELIE 412 + + ++L++ Sbjct: 438 DAEGKITTKLFNEQQKAEDLLK 459 >gi|189373|gb|AAA59968.1| ornithine decarboxylase (EC 4.1.1.17) [Homo sapiens] Length = 350 Score = 97.2 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 100/308 (32%), Gaps = 28/308 (9%) Query: 103 GVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKI 162 K + +I A +G+ +SE EL + + IA T Sbjct: 1 NPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA----------TDDSK 50 Query: 163 STGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ 222 + + KFG + L A L + + GV H+GS E+F +A R + Sbjct: 51 AVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPETFVQAISDARCVFD 109 Query: 223 QLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLV 280 G ++ +D+GGG + + + + + + +II EPGR+ V Sbjct: 110 MGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGRYYV 169 Query: 281 ADVGILVTKV---------------ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 A L + + + D F A+ + Sbjct: 170 ASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPLL 229 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 P D + + I GP C+ D I + GD + E GAY + T+N Sbjct: 230 QKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGF 289 Query: 386 LLIPEIMV 393 V Sbjct: 290 QRPTIYYV 297 >gi|37679422|ref|NP_934031.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016] gi|37198166|dbj|BAC94002.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016] Length = 381 Score = 97.2 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 113/369 (30%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TPF+ + +N + + ALK S V + G Sbjct: 8 EQLKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 67 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++A FN +S L + Sbjct: 68 PFEVKLGYE-KFGGETHAYSVGYSEDDVREVADLCDKIIFNSQS-----QLAAHRHIVEG 121 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA I R+NP ++ P Q L A + ++ + Sbjct: 122 KASIGLRLNPGVS----------YASQDLANPARQFSRLGVQADHIDPAVFDSINGVMFH 171 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++++ + + + + +GGG+ + + Sbjct: 172 MNCENKDVDAFIALLDSISERFGAYLNKLDWVSMGGGVFFTWPG----YDVEKLGLALKA 227 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ + ++ KT ++ + +Y Sbjct: 228 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPAS 287 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + A + I C GD + + G L+I + Y V+ + Sbjct: 288 VL----EASENGEHEYVIGSCSCLAGDQFCVAKFDQPLHVGQRLHILDSAGYTMVKLNWF 343 Query: 383 NSRLLIPEI 391 N + Sbjct: 344 NGLKMPSVY 352 >gi|327484235|gb|AEA78642.1| Carboxynorspermidine decarboxylase, putative [Vibrio cholerae LMA3894-4] Length = 377 Score = 97.2 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 52/391 (13%), Positives = 111/391 (28%), Gaps = 26/391 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L ++TP++ + N + + + ALK S V + G Sbjct: 2 LKDELKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTS 61 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E++ E +S D ++ FN +S+ Sbjct: 62 SGPFEVKLGYE-TFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRH------- 113 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 V ++ P Q L A + ++ + Sbjct: 114 --------LVEGKVSLGLRINPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVM 165 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + LL ++++ + + +GGG+ + + + Sbjct: 166 FHMNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVEKLGAAL 221 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 222 KAFAERHAVQLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEP 281 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + A D I C GD + + + G L+I + Y V+ Sbjct: 282 ASVL----EASDNGQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLN 337 Query: 381 TYNSRLLIPEIM-VNGSQFHIIRPRMTFQEL 410 +N + Q I +++ Sbjct: 338 WFNGLKMPSVYCERKNGQIQKINQ-FGYEDF 367 >gi|153826147|ref|ZP_01978814.1| carboxynorspermidine decarboxylase [Vibrio cholerae MZO-2] gi|149740088|gb|EDM54253.1| carboxynorspermidine decarboxylase [Vibrio cholerae MZO-2] Length = 387 Score = 97.2 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 52/391 (13%), Positives = 111/391 (28%), Gaps = 26/391 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L ++TP++ + N + + + ALK S V + G Sbjct: 12 LKDELKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTS 71 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E++ E +S D ++ FN +S+ Sbjct: 72 SGPFEVKLGYE-TFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRH------- 123 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 V ++ P Q L A + ++ + Sbjct: 124 --------LVEGKVSLGLRINPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVM 175 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + LL ++++ + + +GGG+ + + + Sbjct: 176 FHMNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVEKLGAAL 231 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 232 KAFAERHAVQLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEP 291 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + A D I C GD + + + G L+I + Y V+ Sbjct: 292 ASVL----EASDNGQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLN 347 Query: 381 TYNSRLLIPEIM-VNGSQFHIIRPRMTFQEL 410 +N + Q I +++ Sbjct: 348 WFNGLKMPSVYCERKNGQIQKINQ-FGYEDF 377 >gi|126664242|ref|ZP_01735234.1| arginine decarboxylase, biosynthetic [Flavobacteria bacterium BAL38] gi|126623774|gb|EAZ94470.1| arginine decarboxylase, biosynthetic [Flavobacteria bacterium BAL38] Length = 469 Score = 97.2 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 51/450 (11%), Positives = 122/450 (27%), Gaps = 49/450 (10%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 F + L + L KL TP + Y I +N F N+ + Sbjct: 19 EFTLNKDELQFHGIDLMKLVEEYGTPLKFTY-LPKISQNINRAKMWFRNSMEKHGYEAKY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K++ + ++ ++ S ++ + S V + Sbjct: 78 FYCYCTKSSHFEFILNEALKNNIHIETSSAFDIDIVENLMAQGKINKNSFVVCNGFKRAQ 137 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 + + N ++ + ++ + I + I A + Sbjct: 138 YVTNIARLINNGHKNTIPVIDNFEELDLLQEEIDGKFKIGIRIAAEEEPKFEFYTSRLGI 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + V++ + I + I + + L+ ++ Sbjct: 198 GYKDILPFYRKQIADNKKVELKMLHFFINAGIRDTAYYWNELLKCMKVYIALKKECPSLD 257 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGIL 286 +++GGG I +++Q I E G F V + G Sbjct: 258 SLNIGGGFPIKNSLAFDYDYQYMVDEILNQIKIACDDAEVEVPHIFTEFGSFTVGEAGGA 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +V+ KK D+ + + P + + + + + G C+ Sbjct: 318 LYQVLYQKKQNDRENWNMIDSSFITTLPDTWAINKRFVMMAVNRWNDTYERVLLGGLTCD 377 Query: 347 TGDFI-----ALNRKIAL------PRPGDLLYIEKTGAY--------GAVQSGTYNSRLL 387 D+ + + TGAY G + Sbjct: 378 GDDYYNSEQHMNAVYLPKYNKEKPL----YIGFFNTGAYQETIGGFGGLS----HCILPQ 429 Query: 388 IPEIMVNGSQ-----FHIIRPRMTFQELIE 412 I+++ + + + ++++ Sbjct: 430 PKHILIDKDKNGIIATEVFAEQQKAEDVLA 459 >gi|296393673|ref|YP_003658557.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] gi|296180820|gb|ADG97726.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] Length = 396 Score = 96.8 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 68/395 (17%), Positives = 109/395 (27%), Gaps = 36/395 (9%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 EG V+L LA T + + + A + + Y+ +A A Sbjct: 31 EEGRPLVGGVALTDLADQFGTACDIVDEAEVRAHATAYQAALP--NGEIAYSSRALLAPA 88 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + LA G LD+ S EL AL PA RI+ G KT +E+ AL +G+ +V++ Sbjct: 89 IASWLAEEGLSLDVGSADELAVALRGGFPASRIIAGGAVKTREELAAALAAGVGRISVDT 148 Query: 127 ESE-LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ-IHSLYAY 184 E ++ + + E FG P+ + Sbjct: 149 FDELAWLASRIEKPQQILLRVGLS---------------EELEQAFGFPLSSLAEEAWLR 193 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 A +++ G+ H+GS + L + V A Sbjct: 194 AHRQKNLRVVGLHCHVGSGSHEQALAVLLDFLEHMRSAHGLEAQQLNLGGGVSVETAQAL 253 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 + Q ++ G V + Sbjct: 254 AVERAAQPLPRLIVEPGQGVVGQAGTRLVRVIAKNFGTSGEPCAHVDGPLPISGAVPPSC 313 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPG 363 A D +R + + R H GP D A + R G Sbjct: 314 TGADLDEVRVVNRHSLAADVPTRLLSRPRAESH----GP----AD--AARVPLPADLRAG 363 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQF 398 DLL GAY + I V + Sbjct: 364 DLLAFPGCGAYHHA------HFGALALIGVRDGRA 392 >gi|254780741|ref|YP_003065154.1| carboxynorspermidine decarboxylase [Candidatus Liberibacter asiaticus str. psy62] gi|254040418|gb|ACT57214.1| carboxynorspermidine decarboxylase [Candidatus Liberibacter asiaticus str. psy62] Length = 367 Score = 96.8 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 115/389 (29%), Gaps = 29/389 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + N T + ALK + + TL G S E+ Sbjct: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 E ++ K + + FN S+ + I Sbjct: 64 MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK----DKAQKLHKKI 118 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP ++ + P L +I V+ + + Sbjct: 119 GLRINPSVS----------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 +SF +L+++ ++ I+ I +GGG+ H + D+ + ++ Sbjct: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEK 224 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 +I LEPG +V + L T V+ I ++ ++ LY Sbjct: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ------ES 278 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + A + G C GD + GD + E Y + +N Sbjct: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338 Query: 387 LIPEIMVN--GSQFHIIRPRMTFQELIEL 413 + I V IR ++ + Sbjct: 339 MP-TIAVKNVDGTIKAIRE-FSYNDYYNN 365 >gi|47229384|emb|CAF99372.1| unnamed protein product [Tetraodon nigroviridis] Length = 603 Score = 96.8 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 62/388 (15%), Positives = 115/388 (29%), Gaps = 64/388 (16%) Query: 10 SLHAENVSLEKLAHVV--------QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 L V+LE + +T F A+ + ++ + + + + +K Sbjct: 13 ELLEGGVTLEDVIDGHICEQTLVDKTAFVVGDLGALMRQHVRWQSISPRL--QPYFPVKC 70 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NS+ AVI+ +A LG G V++ E+ L VP E ++ SGV K I A ++ I Sbjct: 71 NSSPAVIEVMASLGLGFVCVNKAEMSLVLEHGVPPEAVILSGVCKQQAHIKYAAKNNIQN 130 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 E+E+EL +++ N + + + FG + L Sbjct: 131 LVCENEAELFKISR------------LHPNAKLLLQLSTQAHAAETSMTFGFSLKSSRHL 178 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A L + S D E++ A R + + Sbjct: 179 LEAAKQLGLQVVGVSFHIPSSCQDLQEAYTHALSDARCVFDMGVESALKPLL-------- 230 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + +++ +PG F VA L ++ K + Sbjct: 231 ------------------DTYFSPLSGVQVLAQPGNFYVASAFCLAVTIMGKKLVNPRWD 272 Query: 302 VILDVAMNDFMRPTLYDAYH----------------EINYIVNPAGDRLHIHADIVGPIC 345 + N+ Y + + + + GP Sbjct: 273 NLAQGEDNEGTEFLYYMNEGIYGPFSCKLLGNSISAPSVHKHALCAEEAMYPSSLWGPSL 332 Query: 346 ETGDFIALNRKIALPRPGDLLYIEKTGA 373 + D + + GD L GA Sbjct: 333 DQLDQVVERCLLPELSVGDWLLFPNMGA 360 >gi|67968709|dbj|BAE00713.1| unnamed protein product [Macaca fascicularis] Length = 332 Score = 96.4 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 84/253 (33%), Gaps = 18/253 (7%) Query: 158 THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 T + + KFG + L A L + + GV H+GS E+F +A Sbjct: 28 TDDSKAVCRLSVKFGATLRNSRLLLERAKEL-NIDVVGVSFHVGSGCTDPETFVQAISDA 86 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEP 275 R + G ++ +D+GGG + + ++ + + + +II EP Sbjct: 87 RCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITNVINPALDKYFPADSGVRIIAEP 146 Query: 276 GRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 GR+ VA L + + + D F A+ Sbjct: 147 GRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAH 206 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + P D + + I GP C+ D I + GD + E GAY + Sbjct: 207 VKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAAS 266 Query: 381 TYNSRLLIPEIMV 393 T+N V Sbjct: 267 TFNGFQRPTIYYV 279 >gi|254507969|ref|ZP_05120097.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus 16] gi|219549077|gb|EED26074.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus 16] Length = 379 Score = 96.4 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 113/369 (30%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP++ + + +N + + ALK S V + G Sbjct: 6 EELKTPYFMINEDKLIENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 65 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++A FN +S L + Sbjct: 66 PFEVKLGYE-TFGGETHAYSVGYSEDDVREVADICDKMIFNSQS-----QLAAYRHIVEG 119 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA I R+NP ++ P Q L A + G+D + Sbjct: 120 KASIGLRLNPGVS----------YAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFH 169 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL +++Q + + +GGG+ + + Sbjct: 170 MNCENKDVDAFIGLLDSISEQFGEYLDKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 225 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 226 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPAS 285 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I A + I C GD + G L+I + Y V+ + Sbjct: 286 IL----EASENGDHEYVIGSCSCLAGDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWF 341 Query: 383 NSRLLIPEI 391 N + Sbjct: 342 NGLRMPSVY 350 >gi|323497704|ref|ZP_08102719.1| carboxynorspermidine decarboxylase [Vibrio sinaloensis DSM 21326] gi|323317180|gb|EGA70176.1| carboxynorspermidine decarboxylase [Vibrio sinaloensis DSM 21326] Length = 379 Score = 96.4 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 113/369 (30%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP++ + + +N + + ALK S V + G Sbjct: 6 EELKTPYFMINEDKLIENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 65 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++A FN +S L + Sbjct: 66 PFEVKLGHE-TFGGETHAYSVGYSEDDVREVADICDKMIFNSQS-----QLAAYRHIIEG 119 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA I R+NP ++ P Q L A + +D + Sbjct: 120 KASIGLRLNPGVS----------YAGQDLANPARQFSRLGVQADHIDAEVFDEIDGVMFH 169 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL +++Q + + +GGG+ + + Sbjct: 170 MNCENKDVDAFIGLLDSISEQFGEYLDKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 225 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ + ++ KT ++ + +YD Sbjct: 226 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDVVENVKKTAIVDSATEAHRLDTLIYDEPAS 285 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I A + I C GD + + G L+I + Y V+ + Sbjct: 286 IL----EASEEGEHEYVIGSCSCLAGDQFCEAKFEQPIKIGQRLHILDSAGYTMVKLNWF 341 Query: 383 NSRLLIPEI 391 N + Sbjct: 342 NGLRMPSVY 350 >gi|86130427|ref|ZP_01049027.1| Orn/DAP/Arg decarboxylase [Dokdonia donghaensis MED134] gi|85819102|gb|EAQ40261.1| Orn/DAP/Arg decarboxylase [Dokdonia donghaensis MED134] Length = 487 Score = 96.4 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 55/443 (12%), Positives = 124/443 (27%), Gaps = 35/443 (7%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDT---- 53 F L + L L P + Y I N F+ A + Sbjct: 19 EFTLKTNELQFHGIDLMALIKEHGAPLKFTY-LPKISDNINRAKTWFAAAIKEHNYAGSY 77 Query: 54 MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K++ + V+ ++ S ++ + + V + D Sbjct: 78 NYCYCTKSSHFKHVLDEALKNDIHIETSSAFDIDIVENLKAQGKINDDTFVICNGFKRDQ 137 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 +Q+ N ++ + ++ I N I A+ + Sbjct: 138 YVQNIARLINNGHKNCITVIDNYEEITLLSDAIDGNYNIGIRIASEEEPKFEFYTSRLGL 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + P V + + I + I + + L+ ++ Sbjct: 198 GYKNIVPFFNKEIKDNPKVTLKMLHFFINTGIRDTAYYWNELLKCMKVYIALKKVCPSLD 257 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGIL 286 +++GGG I + + +I Q I E G F V + G Sbjct: 258 SLNIGGGFPIKNSLAFDYDYAYMVSEIIGQIKQTCDEAGVAVPHIFTEFGSFTVGESGGA 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +V+ K+ D+ + + P + + + + + G C+ Sbjct: 318 IYQVLYQKQQNDREKWNIINSSFITTIPDTWAINKRFVMLAINGWQKEYERVLLGGLTCD 377 Query: 347 TGDFI-----ALNRKIALPRPGD---LLYIEKTGAYGAVQSG----TYNSRLLIPEIMVN 394 + D+ + D + TGAY G + ++++ Sbjct: 378 SDDYYNSEQHMNGIYLPKYN-KDKPLYIGFFNTGAYQESIGGFGGLQHCLIPTPKHVLID 436 Query: 395 GSQ-----FHIIRPRMTFQELIE 412 + + + T ++L+ Sbjct: 437 RDEDGKLVTSVFAEQQTSEQLLS 459 >gi|114576091|ref|XP_001156876.1| PREDICTED: ornithine decarboxylase 1 isoform 2 [Pan troglodytes] Length = 332 Score = 96.4 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 83/253 (32%), Gaps = 18/253 (7%) Query: 158 THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 T + + KFG + L A L + + GV H+GS E+F +A Sbjct: 28 TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPETFVQAISDA 86 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEP 275 R + G ++ +D+GGG + + + + + + +II EP Sbjct: 87 RCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEP 146 Query: 276 GRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 GR+ VA L + + + D F A+ Sbjct: 147 GRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAH 206 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + P D + + I GP C+ D I + GD + E GAY + Sbjct: 207 VKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAAS 266 Query: 381 TYNSRLLIPEIMV 393 T+N V Sbjct: 267 TFNGFQRPTIYYV 279 >gi|260772924|ref|ZP_05881840.1| carboxynorspermidine decarboxylase putative [Vibrio metschnikovii CIP 69.14] gi|260612063|gb|EEX37266.1| carboxynorspermidine decarboxylase putative [Vibrio metschnikovii CIP 69.14] Length = 376 Score = 96.4 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 112/365 (30%), Gaps = 24/365 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP++ + N + + ALK S V + G E+ Sbjct: 8 TPYFMIDEAKLIANLEIAKRLKERSGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPFEV 67 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S D ++A FN +S L + KA + Sbjct: 68 KLGYE-KFGGETHAYSVGYSEQDVKEVADICDKMIFNSQS-----QLAAYRHLVEGKASL 121 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP ++ + +K + G+ L ++ + + Sbjct: 122 GLRLNPGVSYAGQDLANPARKYSRLGV----------QFDKLDTSVFDSINGVMFHMNCE 171 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + LL ++ + + + + +GGG+ + A + + Sbjct: 172 NKDVDAFIALLDAISDKFGAYLDKLDWVSLGGGVFFTWPG----YDVDKLADALKAFADK 227 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 Q ++ LEPG ++ LV V+ I + +T ++ + +Y Sbjct: 228 HQVQLYLEPGEAIITQTTDLVVTVVDIVDNEMQTAIVDSATEAHRLDTLIY----REPAS 283 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 V A + I C GD + + + G L+I + Y V+ +N Sbjct: 284 VLEANQQGEHEYVIGSCSCLAGDQFCVAKFAEPLQIGQKLHIMDSAGYTMVKLNWFNGLK 343 Query: 387 LIPEI 391 + Sbjct: 344 MPSVY 348 >gi|28898714|ref|NP_798319.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus RIMD 2210633] gi|260362645|ref|ZP_05775545.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus K5030] gi|260879746|ref|ZP_05892101.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus AN-5034] gi|260898780|ref|ZP_05907221.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus Peru-466] gi|260901593|ref|ZP_05909988.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus AQ4037] gi|28806932|dbj|BAC60203.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus RIMD 2210633] gi|308086612|gb|EFO36307.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus Peru-466] gi|308093399|gb|EFO43094.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus AN-5034] gi|308108689|gb|EFO46229.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus AQ4037] gi|308114223|gb|EFO51763.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus K5030] Length = 377 Score = 96.4 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 117/369 (31%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + + N + + ALK S V + G Sbjct: 4 NELKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++A FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVREVADICDKMIFNSQS-----QLAAYRHIVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA I R+NP ++ + +K + G+ A + G+D + Sbjct: 118 KASIGLRLNPGVSYAGQDLANPARKFSRLGV----------QADHIKPEVFEGIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL +++Q + + + +GGG+ + + Sbjct: 168 MNCENKDVDAFIGLLDAISEQFGEYLNKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 224 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I A D I C GD + G L+I + Y V+ + Sbjct: 284 IL----EASDNGEHEYVIGSCSCLAGDQFCVANFDQPLEIGQRLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEI 391 N + Sbjct: 340 NGLRMPSVY 348 >gi|149912175|ref|ZP_01900758.1| carboxynorspermidine decarboxylase [Moritella sp. PE36] gi|149804745|gb|EDM64791.1| carboxynorspermidine decarboxylase [Moritella sp. PE36] Length = 397 Score = 96.4 bits (238), Expect = 9e-18, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 123/362 (33%), Gaps = 24/362 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP++ + +N D + ALK S T++ G E+ Sbjct: 21 TPYFMIHEDKLLRNLEICKQLKDLSGVKLVLALKCFSTWGTFNTISKYLDGTTSSGPYEV 80 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + P E +S D I + + FN S+ E L + + Sbjct: 81 QLGHE-TFPGETHAYSVGYSEDDVIAVRDIADKIIFNSVSQLERMQP-----LLPASSSV 134 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP+++ + + G+ + L ++ +D + + Sbjct: 135 GLRINPEVSYAGQDLADPARAYSRLGV----------KQAGLTAETVAKLDGLMFHMNCE 184 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + F K+L +++Q ++ + + +GGGL Y ++ A + + Sbjct: 185 NKDFVAYNKILTTISEQFSAHLDQVSWVSLGGGLFFTYPG----YPVAELALALKAFAEK 240 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 Q ++ LEPG ++ D LV V+ I ++ KT ++ + +Y+ Sbjct: 241 HQVQLYLEPGEAVITDTTDLVVSVLDIVENDKKTAIVDSATEAHRLDTLIYNEPASFAE- 299 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 A + I C GD + GD L I+ + Y V+ +N Sbjct: 300 ---ATEDGQHPYIIGSCSCLAGDIFGEANFPQPLQVGDRLTIKDSAGYTMVKLNWFNGLK 356 Query: 387 LI 388 + Sbjct: 357 MP 358 >gi|229508264|ref|ZP_04397769.1| hypothetical protein VCF_003500 [Vibrio cholerae BX 330286] gi|229511497|ref|ZP_04400976.1| hypothetical protein VCE_002906 [Vibrio cholerae B33] gi|229518636|ref|ZP_04408079.1| hypothetical protein VCC_002661 [Vibrio cholerae RC9] gi|229520778|ref|ZP_04410201.1| hypothetical protein VIF_001303 [Vibrio cholerae TM 11079-80] gi|229523718|ref|ZP_04413123.1| hypothetical protein VCA_001288 [Vibrio cholerae bv. albensis VL426] gi|229607838|ref|YP_002878486.1| hypothetical protein VCD_002752 [Vibrio cholerae MJ-1236] gi|255744947|ref|ZP_05418897.1| carboxynorspermidine decarboxylase putative [Vibrio cholera CIRS 101] gi|262161768|ref|ZP_06030786.1| carboxynorspermidine decarboxylase putative [Vibrio cholerae INDRE 91/1] gi|262169641|ref|ZP_06037332.1| carboxynorspermidine decarboxylase putative [Vibrio cholerae RC27] gi|229337299|gb|EEO02316.1| hypothetical protein VCA_001288 [Vibrio cholerae bv. albensis VL426] gi|229342333|gb|EEO07328.1| hypothetical protein VIF_001303 [Vibrio cholerae TM 11079-80] gi|229343325|gb|EEO08300.1| hypothetical protein VCC_002661 [Vibrio cholerae RC9] gi|229351462|gb|EEO16403.1| hypothetical protein VCE_002906 [Vibrio cholerae B33] gi|229355769|gb|EEO20690.1| hypothetical protein VCF_003500 [Vibrio cholerae BX 330286] gi|229370493|gb|ACQ60916.1| hypothetical protein VCD_002752 [Vibrio cholerae MJ-1236] gi|255737418|gb|EET92813.1| carboxynorspermidine decarboxylase putative [Vibrio cholera CIRS 101] gi|262021875|gb|EEY40585.1| carboxynorspermidine decarboxylase putative [Vibrio cholerae RC27] gi|262028500|gb|EEY47155.1| carboxynorspermidine decarboxylase putative [Vibrio cholerae INDRE 91/1] Length = 377 Score = 96.0 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 119/391 (30%), Gaps = 26/391 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L ++TP++ + N + + + ALK S V + G Sbjct: 2 LKDELRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTS 61 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E++ E +S D ++ FN +S L + Sbjct: 62 SGPFEVKLGYE-TFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQS-----QLAAYRHLV 115 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 KA + R+NP ++ P Q L A + ++ + Sbjct: 116 EGKASLGLRINPGVS----------YAGQDLANPARQFSRLGVQADHIDESVFDSINGVM 165 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + LL ++++ + + +GGG+ + + + Sbjct: 166 FHMNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVEKLGAAL 221 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 222 KAFAERHAVQLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEP 281 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + A D+ I C GD + + + G L+I + Y V+ Sbjct: 282 ASVL----EASDKGQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLN 337 Query: 381 TYNSRLLIPEIM-VNGSQFHIIRPRMTFQEL 410 +N + Q I +++ Sbjct: 338 WFNGLKMPSVYCERKNGQIQKINQ-FGYEDF 367 >gi|15641630|ref|NP_231262.1| carboxynorspermidine decarboxylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121730008|ref|ZP_01682422.1| carboxynorspermidine decarboxylase [Vibrio cholerae V52] gi|147673110|ref|YP_001217174.1| carboxynorspermidine decarboxylase [Vibrio cholerae O395] gi|153214667|ref|ZP_01949527.1| carboxynorspermidine decarboxylase [Vibrio cholerae 1587] gi|153819366|ref|ZP_01972033.1| carboxynorspermidine decarboxylase [Vibrio cholerae NCTC 8457] gi|153822200|ref|ZP_01974867.1| carboxynorspermidine decarboxylase [Vibrio cholerae B33] gi|227081776|ref|YP_002810327.1| carboxynorspermidine decarboxylase [Vibrio cholerae M66-2] gi|254285432|ref|ZP_04960397.1| carboxynorspermidine decarboxylase [Vibrio cholerae AM-19226] gi|254848743|ref|ZP_05238093.1| carboxynorspermidine decarboxylase [Vibrio cholerae MO10] gi|298498294|ref|ZP_07008101.1| carboxynorspermidine decarboxylase [Vibrio cholerae MAK 757] gi|9656136|gb|AAF94776.1| carboxynorspermidine decarboxylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121628242|gb|EAX60759.1| carboxynorspermidine decarboxylase [Vibrio cholerae V52] gi|124115189|gb|EAY34009.1| carboxynorspermidine decarboxylase [Vibrio cholerae 1587] gi|126510080|gb|EAZ72674.1| carboxynorspermidine decarboxylase [Vibrio cholerae NCTC 8457] gi|126520268|gb|EAZ77491.1| carboxynorspermidine decarboxylase [Vibrio cholerae B33] gi|146314993|gb|ABQ19532.1| carboxynorspermidine decarboxylase [Vibrio cholerae O395] gi|150424704|gb|EDN16640.1| carboxynorspermidine decarboxylase [Vibrio cholerae AM-19226] gi|227009664|gb|ACP05876.1| carboxynorspermidine decarboxylase [Vibrio cholerae M66-2] gi|227013532|gb|ACP09742.1| carboxynorspermidine decarboxylase [Vibrio cholerae O395] gi|254844448|gb|EET22862.1| carboxynorspermidine decarboxylase [Vibrio cholerae MO10] gi|297542627|gb|EFH78677.1| carboxynorspermidine decarboxylase [Vibrio cholerae MAK 757] Length = 387 Score = 96.0 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 119/391 (30%), Gaps = 26/391 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L ++TP++ + N + + + ALK S V + G Sbjct: 12 LKDELRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTS 71 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E++ E +S D ++ FN +S L + Sbjct: 72 SGPFEVKLGYE-TFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQS-----QLAAYRHLV 125 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 KA + R+NP ++ P Q L A + ++ + Sbjct: 126 EGKASLGLRINPGVS----------YAGQDLANPARQFSRLGVQADHIDESVFDSINGVM 175 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + LL ++++ + + +GGG+ + + + Sbjct: 176 FHMNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVEKLGAAL 231 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 232 KAFAERHAVQLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEP 291 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + A D+ I C GD + + + G L+I + Y V+ Sbjct: 292 ASVL----EASDKGQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLN 347 Query: 381 TYNSRLLIPEIM-VNGSQFHIIRPRMTFQEL 410 +N + Q I +++ Sbjct: 348 WFNGLKMPSVYCERKNGQIQKINQ-FGYEDF 377 >gi|295136029|ref|YP_003586705.1| arginine decarboxylase [Zunongwangia profunda SM-A87] gi|294984044|gb|ADF54509.1| arginine decarboxylase [Zunongwangia profunda SM-A87] Length = 464 Score = 96.0 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 48/445 (10%), Positives = 116/445 (26%), Gaps = 41/445 (9%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 FK L ++ L +L P + Y I N F A +D Sbjct: 19 EFKLEGSELQFHDIDLMELVKQYGAPLKFTY-LPKISDNINRAKGWFKAAMKNLDYKGTY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA----ERIVFSGVGKTID 109 CY K++ Q V+ ++ S ++ + V K Sbjct: 78 NYCYCTKSSHFQYVMNEALKNDIHIETSSAFDINIVEKLKASGKLKDDAYVICNGFKRDQ 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 + + + + + T + Sbjct: 138 YVANIGRLINNGHKNCIPIIDNYEELSLLEDRINDDFEVGIRIASEEEPKFEFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + + V + + I + I + + L+ Sbjct: 198 GYKN---IVPFYNQSIKDNDKVNLKMLHFFINTGIRDTAYYWNELNKCLKVYINLKRICP 254 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADV 283 + +++GGG I +I+Q + + E G F V + Sbjct: 255 TLDSLNIGGGFPIKNSLAFDYDYQYMVEEIINQIQLACKEADVEVPNLFTEFGSFTVGES 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G + +++ K+ D+ + + P + + + + + + G Sbjct: 315 GGAIYEILYQKQQNDREKWNMINSSFITTLPDTWAISKKFVMLAINRWNDEYERVLLGGL 374 Query: 344 ICETGDFI-----ALNRKIALPRPGD---LLYIEKTGAYGAVQSG----TYNSRLLIPEI 391 C++ D+ + + D + TGAY G + + Sbjct: 375 TCDSDDYYNSEQNTNAIYLPKFK-KDKPLYIGFFNTGAYQQTIGGFGGLQHCLIPQPKHV 433 Query: 392 MVNGSQ-----FHIIRPRMTFQELI 411 +++ + + + ++++ Sbjct: 434 LIDKDENGKIFTKLFSEQQKAEDML 458 >gi|258624952|ref|ZP_05719879.1| carboxynorspermidine decarboxylase [Vibrio mimicus VM603] gi|258582808|gb|EEW07630.1| carboxynorspermidine decarboxylase [Vibrio mimicus VM603] Length = 387 Score = 96.0 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 55/389 (14%), Positives = 122/389 (31%), Gaps = 26/389 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + N + + + ALK S V + G Sbjct: 14 NELKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSG 73 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++ FN +S L + Sbjct: 74 PFEVKLGYE-TFGGETHAYSVGYSEDDVKEVVDICDKMIFNSQS-----QLAAYRHLVED 127 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA + R+NP ++ + +K + G+ A + +D + Sbjct: 128 KASLGLRINPGVSYAGQDLANPARKFSRLGV----------QADHIDENVFETIDGVMFH 177 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++++ + + + +GGG+ + + + Sbjct: 178 MNCENKDVDAFISLLDAISERFGRHLDKLDWVSLGGGVFFTWPG----YDVDKLGAALKA 233 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 234 FSERHGVQLYLEPGEAVITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPAS 293 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + A D I C GD + + + G L+I + Y V+ + Sbjct: 294 VL----EASDNGQHEYVIGSCSCLAGDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWF 349 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 N + + I +++ Sbjct: 350 NGLKMPSVYCERQNGEIQKINQ-FGYEDF 377 >gi|149192298|ref|ZP_01870508.1| carboxynorspermidine decarboxylase [Vibrio shilonii AK1] gi|148833867|gb|EDL50894.1| carboxynorspermidine decarboxylase [Vibrio shilonii AK1] Length = 377 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 118/368 (32%), Gaps = 24/368 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 + + ++TP++ + + +N + + + ALK S V + G Sbjct: 2 IKNELKTPYFMINEDKLVENLEKAKHLKEVSGVKLVLALKCFSTWGVFDIIKPYLDGSTS 61 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E++ E +S D ++A FN +S L + Sbjct: 62 SGPFEVKLGYE-TFGGETHAYSVGYTEDDVREVADICDKMIFNSQS-----QLAAYRHIV 115 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 K I R+NP ++ + + + G+ A + +D + Sbjct: 116 EGKTSIGLRLNPGVSYAGQDLANPARPYSRLGV----------QADHIDPTIFDSIDGVM 165 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + LL ++++ ++ + + +GGG+ + + + Sbjct: 166 FHMNCENKDVDAFIGLLDAISERFGTHLDKLDWVSMGGGVFFTWPG----YDIDKLGAAL 221 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + ++ LEPG ++ LV V+ I ++ KT ++ + +YD Sbjct: 222 SAFSKKHGVQLYLEPGEAIITKTTDLVVTVVDIVENEKKTAIVNSATEAHRLDTLIYDEP 281 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 I A I C GD + G L+I + Y V+ Sbjct: 282 ASIL----EANSEGDHEYVIGSCSCLAGDQFCEAKFDEPLEVGQRLHIMDSAGYTMVKLN 337 Query: 381 TYNSRLLI 388 +N + Sbjct: 338 WFNGLKMP 345 >gi|303232781|ref|ZP_07319466.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Atopobium vaginae PB189-T1-4] gi|302481267|gb|EFL44342.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein [Atopobium vaginae PB189-T1-4] Length = 454 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 88/414 (21%), Positives = 152/414 (36%), Gaps = 39/414 (9%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM------VCYALKANSNQAVIKTL 71 L ++A V TP Y ++ A + D +CY++KAN +I Sbjct: 39 LCEIARVHTTPTYIFNVPAFRARLAKTRDIVTSSDVNASARISMCYSMKANP--FLIAAA 96 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 L++ S GEL +A +P RIV+SGV K D+I AL + ES +L+ Sbjct: 97 HSEHYKLEVCSPGELDICIAQHIPGARIVYSGVCKQPDDIRAALSYHVGVLTAESPLQLE 156 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 +N+ A L +A+ + + +FG+ + +L A +T P + Sbjct: 157 AINRVATELHAAGELAYSRV--------PILLRLNAKSQFGMAQSDLEALIAARNTFPLL 208 Query: 192 KISGVDMHIGSQIDQ-IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + G+ +G+Q + + L + S G Q ++ G GL Y D Sbjct: 209 EFVGIHYFVGTQRKKLARQQKELAFLSDLIDTLYDSYGWRAQLLEYGPGLAYPYFVDDDM 268 Query: 251 PSSSDYASLIHQYFGN--LQCKIILEPGRFLVADVGILVTKV-----------ISIKKSA 297 + A + + I +E GRFL + G V+++ Sbjct: 269 SDTYAPARELAPLLQKLAQKVDICIEMGRFLASACGTYVSRIVDLKQGADSDSYYAFIDG 328 Query: 298 DKTFVILDV------AMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 V + + P + E +V A R + G +C T D + Sbjct: 329 GINHVAYLGQMMGLKCPHIDVVPGAAASVCEDTGVVQSAPARQMRRWTLCGSLCTTADVL 388 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQ-FHIIRP 403 + GDLL + GAY ++ + SR L ++ S+ + +R Sbjct: 389 VREFEAP-LAMGDLLAFQHIGAYSVTEAMYLFLSRTLPSVVLYYDSEHYECVRK 441 >gi|157737938|ref|YP_001490622.1| carboxynorspermidine decarboxylase [Arcobacter butzleri RM4018] gi|157699792|gb|ABV67952.1| carboxynorspermidine decarboxylase [Arcobacter butzleri RM4018] Length = 381 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 107/387 (27%), Gaps = 22/387 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P Y +EKN D D + ALK + + G Sbjct: 12 EKLPSPAYVCEEELLEKNLKLLKRVQDEADISILLALKGFAMHSTFDLCKKYLKGCCASG 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E A + E + D + + N + L + Sbjct: 72 LHE------AILAKEEFGKEVHTYSPAFKDEEIDEIVAISNHLVFNSFSQLKRFKDKAYG 125 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 K + R+NP+ ++ + + G L + Sbjct: 126 KVSLGIRLNPEYSSVEVDLYNPCAPYSRMGTTKANFDESL-----LEFLDGFHFHALCEQ 180 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 +D +E +AF+ ++ ++ GGG I Sbjct: 181 NVDALEGALEAFEKNF------SQYFDRLKWVNFGGGHHITRADYDVEGLIKLL---KDF 231 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 K+ +EPG + G LV V+ I + + + + P + Sbjct: 232 KSRYPHLKVYMEPGEAIGWQTGYLVATVLDIVYNG--MDLAILDTSAEAHMPDTLAMPYR 289 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + G C +GD I + GD + +E Y V++ T+ Sbjct: 290 AMIRNSGLANEKPYTYRFGGNTCLSGDIIGDYSFDEPLKVGDKIILEDMIHYTMVKTTTF 349 Query: 383 NSRLLIPEIMVNGSQFHIIRPRMTFQE 409 N L ++ N + I + + Sbjct: 350 NGIKLPSIVIKNKENSYKIVKNFGYND 376 >gi|153830885|ref|ZP_01983552.1| carboxynorspermidine decarboxylase [Vibrio cholerae 623-39] gi|148873636|gb|EDL71771.1| carboxynorspermidine decarboxylase [Vibrio cholerae 623-39] Length = 387 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 57/400 (14%), Positives = 122/400 (30%), Gaps = 26/400 (6%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 +++ + L ++TP++ + N + + ALK S V + Sbjct: 3 TLQDIGINMLKDELRTPYFMIDEAKLIANLEIAKYLKEISGVKMVLALKCFSTWGVFDII 62 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G E++ E +S D ++ FN +S Sbjct: 63 KPYLDGTTSSGPFEVKLGYE-TFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQS----- 116 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 L + KA + R+NP ++ P Q L A + Sbjct: 117 QLAAYRHLVEGKASLGLRINPGVS----------YAGQDLANPARQFSRLGVQADHIDES 166 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 ++ + + + LL ++++ + + +GGG+ + Sbjct: 167 VFDSINGVMFHMNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----Y 222 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + + ++ LEPG ++ LV V+ I ++ KT ++ Sbjct: 223 DVEKLGAALKAFAERHAVQLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHR 282 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + +Y + A D+ I C GD + + + G L+I + Sbjct: 283 LDTLIYKEPASVL----EASDKGQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQKLHILDS 338 Query: 372 GAYGAVQSGTYNSRLLIPEIM-VNGSQFHIIRPRMTFQEL 410 Y V+ +N + Q I +++ Sbjct: 339 AGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQ-FGYEDF 377 >gi|219115001|ref|XP_002178296.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410031|gb|EEC49961.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 392 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 71/392 (18%), Positives = 127/392 (32%), Gaps = 44/392 (11%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIVSEGELR 87 F I K + F +ALK N + V L G G D S E+ Sbjct: 4 FVLCDLNIIRKKLQVWRQLFPR--VRPLFALKCNPDPMVAAVLGQSGVCGFDCASLPEVE 61 Query: 88 -RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + +V++ + ++++AL G+ + EL +++ Sbjct: 62 LALKSVSNNPRLLVYANPQRAEKDLEMALSLGVRALTFDGPEELHKVHRAYQQRLAAQSN 121 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + + ST +KFG +I SL A TL ++I GV H GS Sbjct: 122 SRPPQMILRILVPDESSTVPLGEKFGASPARIASLANLALTLG-LRIIGVSFHCGSGNHD 180 Query: 207 IESFHKAFKLLRDLTQQ----LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS-------- 254 ++ A +L + Q + + +D+GGG Sbjct: 181 PRAYRIAIELAAEAIQTIDLVQKDHKAACWLLDIGGGYPGLDGMGGDAGRFCGSKVKLDE 240 Query: 255 ----------------DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + L+++ F + Q + EPGR+ V L +++ + Sbjct: 241 SLVQEDETETTEKVSNIVSPLLNKLFPHEQIHFVSEPGRYFVEGAFALCSRIYQAQSEYA 300 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVN-----------PAGDRLHIHADIVGPICET 347 V + F+ + + + D + I + I GP E Sbjct: 301 SESRHTVVRRHYFIAQGVQGMFKDCLLCNEVFTPVPLFVDSCCTDVIRIPSVIHGPSGEL 360 Query: 348 GDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 D IA + + GD L ++ GAY + Sbjct: 361 YDIIARDHPLPFLEAGDWLLFDRMGAYTLSIA 392 >gi|225012423|ref|ZP_03702859.1| Orn/DAP/Arg decarboxylase 2 [Flavobacteria bacterium MS024-2A] gi|225003400|gb|EEG41374.1| Orn/DAP/Arg decarboxylase 2 [Flavobacteria bacterium MS024-2A] Length = 465 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 49/426 (11%), Positives = 121/426 (28%), Gaps = 35/426 (8%) Query: 3 AFKYFEGS-LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DT 53 FK + + E V +E L TP I + F Sbjct: 19 EFKLNQNHSIVWEGVDIESLLTEHGTPLKVTYLPKISEKIKHAKALFQKTISALNYEGAY 78 Query: 54 MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K+ ++ ++ S ++ + + V + D Sbjct: 79 NYCYCTKSAHFSHILDEALKNDIHIETSSAFDIEIVKKLKAQGKITQNTFVICNGFKRDQ 138 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 +++ N + + ++ I I A+ + Sbjct: 139 YIENIAELINSGDYNCIPIIDNYDEIQLLDGQINRPFQIGIRIASEEEPKFEFYTSRLGI 198 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + T P +++ + I + I + + ++ +L+ N H++ Sbjct: 199 GYKNIVPFYKREIKTNPKLELKMLHFFINTGIKDNSYYWNELQKCLNVYVELKKNCHSLT 258 Query: 233 HIDVGGGLG------IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 +++GGG + ++ + + G I E G + V + G + Sbjct: 259 DLNIGGGFPTKDSLGFDFDYEYMIFEIINLIQTVCNEGGVPVPNIFTEFGSYTVGESGAI 318 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 +V+ K+ D+ + + P + + ++ + + G C+ Sbjct: 319 FYEVLYQKQQNDREKWNMINSSFITTLPDSWAINKRFMMLPINHWNQPYERVLLGGLTCD 378 Query: 347 TGDFI-----ALNRKIA------LPRPGDLLYIEKTGAYGAVQSG----TYNSRLLIPEI 391 + D+ + + TGAY G + I Sbjct: 379 SDDYYNNEQHVNAIYLPVFPQKKPL----YIGFFNTGAYQESLGGFGGLQHCLIPQPKHI 434 Query: 392 MVNGSQ 397 +++ ++ Sbjct: 435 LIHKTE 440 >gi|149528855|ref|XP_001516497.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus] Length = 344 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 65/274 (23%), Positives = 113/274 (41%), Gaps = 15/274 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + +L F A YA+K N ++ V+KTLA LG+G D S+ E+ Sbjct: 42 FFVADLGDVVRKHLRFLKALPR--VQPFYAVKCNGSRGVVKTLAELGTGFDCASKKEIEL 99 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP +I+++ K I I A + G+ ++E EL + +R IA Sbjct: 100 VQSIGVPGHKIIYANPCKQISHIKYAARHGVQVMTFDNEVELAKVAKRYPGARMVLSIA- 158 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + S KFG + L A + V++ G+ H+GS + Sbjct: 159 ---------TDEFKSPAHLNIKFGATLKSCRHLLETAKKM-NVEVIGISFHVGSACCDPQ 208 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 +F +A R + + G+ + +D+GGG +S R + + + Sbjct: 209 AFTQAIADARLVFEMGAELGYRMHLLDLGGGFPGPENSTVRFEELASVINSALDLYFPEG 268 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 +II EPGR+ VA L +I+ + + Sbjct: 269 CGVEIIAEPGRYYVASSFTLAVNIIAKEHIPSEH 302 >gi|262393874|ref|YP_003285728.1| carboxynorspermidine decarboxylase putative [Vibrio sp. Ex25] gi|262337468|gb|ACY51263.1| carboxynorspermidine decarboxylase putative [Vibrio sp. Ex25] Length = 377 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 114/369 (30%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + + +N D + ALK S V + G Sbjct: 4 NELKTPYFMINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D D+A FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVRDVADICDKMIFNSQS-----QLAAYRHIVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA I R+NP ++ P Q L A + G+D + Sbjct: 118 KASIGLRLNPGVS----------YAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL +++Q + + +GGG+ + + Sbjct: 168 MNCENKDVDAFIGLLDAISEQFGEYLDKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 224 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I A + I C GD + G L+I + Y V+ + Sbjct: 284 IL----EASENGEHEYVIGSCSCLAGDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEI 391 N + Sbjct: 340 NGLRMPSVY 348 >gi|262165800|ref|ZP_06033537.1| carboxynorspermidine decarboxylase putative [Vibrio mimicus VM223] gi|262025516|gb|EEY44184.1| carboxynorspermidine decarboxylase putative [Vibrio mimicus VM223] Length = 377 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 55/389 (14%), Positives = 121/389 (31%), Gaps = 26/389 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + N + + + ALK S V + G Sbjct: 4 NELKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++ FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVKEVVDICDKMIFNSQS-----QLAAYRHLVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA + R+NP ++ + +K + G+ A + +D + Sbjct: 118 KASLGLRINPGVSYAGQDLANPARKFSRLGV----------QADHIDENVFETIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++++ + + +GGG+ + + + Sbjct: 168 MNCENKDVDAFISLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVDKLGAALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 224 FSERHGVQLYLEPGEAVITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + A D I C GD + + + G L+I + Y V+ + Sbjct: 284 VL----EASDNGQHEYVIGSCSCLAGDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 N + + I +++ Sbjct: 340 NGLKMPSVYCERQNGEIQKINQ-FGYEDF 367 >gi|86742732|ref|YP_483132.1| diaminopimelate decarboxylase [Frankia sp. CcI3] gi|86569594|gb|ABD13403.1| Diaminopimelate decarboxylase [Frankia sp. CcI3] Length = 484 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 91/416 (21%), Positives = 148/416 (35%), Gaps = 71/416 (17%) Query: 53 TMVCYALKANSNQAVIKTL----------------------------------------- 71 VCYA+KANS ++ L Sbjct: 61 AEVCYAVKANSFPPILDALLRGTGPDIPRSGRERSDSSPGASPTDARSDARSDARSDARS 120 Query: 72 -AHLGS------GLDIVSEGELRRALAAPVPAE-----RIVFSGVGKTIDEIDLALQSGI 119 A G+ G ++ S E+R A AA + R+V SG GK++ + + + + Sbjct: 121 DARTGASGRGIDGFEVSSAHEVRLAQAAYGRVDSARRPRLVASGPGKSMTLLTALVSADV 180 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 NVES EL+ L+ A LG++ A RVNP + G + FGIP ++ Sbjct: 181 DVVNVESFGELRRLDAVAARLGRRVRAAVRVNPAQ-VGLAGSLQMGGRPSAFGIPETEVP 239 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + A+ L + + G +H S + + D + + + GG Sbjct: 240 AALELAADLAHIDVVGFHVHAVSGNLDAAAHLGYVRWCLDFAVRTAAVAGIELRMVDVGG 299 Query: 240 LGIAYHSDHR----PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 R P + + ++I EPGR LVAD G +VI +K Sbjct: 300 GFGVPFEPDRRGDRPFDLIRFGEGLSSLPVPDGTRVIFEPGRMLVADSGWYAAEVIDVKH 359 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH------------ADIVGP 343 S FVIL ++ F PT ++ H + + +VG Sbjct: 360 SYGTEFVILRGGIHHFALPTSWEIVHNFAVVERSGRNGGPEPEHTREAVVEGRPVTVVGE 419 Query: 344 ICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVNGSQF 398 +C D +A + + RPGD++ GAYG + + I + G++ Sbjct: 420 LCTPEDTLARDITVDRVRPGDVVVFPMAGAYGYEFALPDFLGHPRARRIELRGTRH 475 >gi|269967062|ref|ZP_06181130.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus 40B] gi|269828321|gb|EEZ82587.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus 40B] Length = 377 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 113/369 (30%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + + +N D + ALK S V + G Sbjct: 4 NELKTPYFMINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D D+A FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVRDVADICDKMIFNSQS-----QLAAYRHIVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA I R+NP ++ P Q L A + G+D + Sbjct: 118 KASIGLRLNPGVS----------YAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++ Q + + +GGG+ + + Sbjct: 168 MNCENKDVDAFIGLLDAISAQFGEYLDKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 224 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I A + I C GD + G L+I + Y V+ + Sbjct: 284 IL----EASENGEHEYVIGSCSCLAGDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEI 391 N + Sbjct: 340 NGLRMPSVY 348 >gi|328474721|gb|EGF45526.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus 10329] Length = 377 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 117/369 (31%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + + N + + ALK S V + G Sbjct: 4 NELKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++A FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVREVADICDKMIFNSQS-----QLAAYRHIVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA I R+NP ++ + +K + G+ A + G+D + Sbjct: 118 KASIGLRLNPGVSYAGQDLANPARKFSRLGV----------QADHIKPEVFEGIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL +++Q + + + +GGG+ + + Sbjct: 168 MNCENKDVDAFIGLLDAISEQFGEYLNKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 224 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I A D I C GD + G L+I + Y V+ + Sbjct: 284 IL----EASDNGEHEYVIGSCSCLAGDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEI 391 N + Sbjct: 340 NGLRMPSVY 348 >gi|258621933|ref|ZP_05716963.1| carboxynorspermidine decarboxylase [Vibrio mimicus VM573] gi|258585871|gb|EEW10590.1| carboxynorspermidine decarboxylase [Vibrio mimicus VM573] Length = 377 Score = 95.7 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 55/389 (14%), Positives = 120/389 (30%), Gaps = 26/389 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + N + + + ALK S V + G Sbjct: 4 NELKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++ FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVKEVVDICDKMIFNSQS-----QLAAYRHLVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA + R+NP ++ + +K + G+ A + +D + Sbjct: 118 KASLGLRINPGVSYAGQDLANPARKFSRLGV----------QADHIDESVFETIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++++ + + +GGG+ + + Sbjct: 168 MNCENKDVDAFISLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVDKLGVALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 224 FSERHGVQLYLEPGEAVITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + A D I C GD + + + G L+I + Y V+ + Sbjct: 284 VL----EASDNGQHEYVIGSCSCLAGDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 N + + I +++ Sbjct: 340 NGLKMPSVYCERQNGEIQKINQ-FGYEDF 367 >gi|229515019|ref|ZP_04404479.1| hypothetical protein VCB_002672 [Vibrio cholerae TMA 21] gi|229347724|gb|EEO12683.1| hypothetical protein VCB_002672 [Vibrio cholerae TMA 21] Length = 377 Score = 95.3 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 119/391 (30%), Gaps = 26/391 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L ++TP++ + N + + + ALK S V + G Sbjct: 2 LKDELRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTS 61 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E++ E +S D ++ FN +S L + Sbjct: 62 SGPFEVKLGYE-TFGGETHAYSVGYSEEDVKEVIDICDKVIFNSQS-----QLAAYRHLV 115 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 KA + R+NP ++ P Q L A + ++ + Sbjct: 116 EGKASLGLRINPGVS----------YAGQDLANPARQFSRLGVQADHIDESVFDSINGVM 165 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + LL ++++ + + +GGG+ + + + Sbjct: 166 FHMNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVEKLGAAL 221 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 222 KAFAERHAVQLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEP 281 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + A D+ I C GD + + + G L+I + Y V+ Sbjct: 282 ASVL----EASDKGQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLN 337 Query: 381 TYNSRLLIPEIM-VNGSQFHIIRPRMTFQEL 410 +N + Q I +++ Sbjct: 338 WFNGLKMPSVYCERKNGQIQKINQ-FGYEDF 367 >gi|294634823|ref|ZP_06713346.1| diaminopimelate decarboxylase [Edwardsiella tarda ATCC 23685] gi|291091759|gb|EFE24320.1| diaminopimelate decarboxylase [Edwardsiella tarda ATCC 23685] Length = 305 Score = 95.3 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 74/302 (24%), Positives = 117/302 (38%), Gaps = 19/302 (6%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L L TP + Y I + T FD + +A KA SN +++ + G Sbjct: 17 LGALPAQFGTPLWIYDAGVISRQIDTLRQ-FD----TIRFAQKACSNLHILRLMRQAGVR 71 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D VS GE+ RAL A T D ID A + + + + ++ Sbjct: 72 VDAVSLGEIERALLAGFQPGGDEI---VFTADVIDEATLDRVCALAIPVNAGSCDMLRQL 128 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 P+ R+NP +K +TG + K GI + A + Sbjct: 129 GERAPGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWHQDLDQALALIDAYDLRLV---- 184 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY- 256 + I + ++ L Q + G +IQ I GGGL I Y +D + + Y Sbjct: 185 -GLHMHIGSGVDYDHLARVCDTLANQAIALGRDIQAISAGGGLSIPYRADEQSVDVTHYF 243 Query: 257 -----ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 A ++ +EPGR+LVA G+L+ +V ++K + FV+ D ND Sbjct: 244 GLWDAARRRIAAHLGHPVRLEIEPGRYLVAQSGLLMAEVRAVKTMGQRHFVLADAGFNDL 303 Query: 312 MR 313 MR Sbjct: 304 MR 305 >gi|229529344|ref|ZP_04418734.1| hypothetical protein VCG_002439 [Vibrio cholerae 12129(1)] gi|229333118|gb|EEN98604.1| hypothetical protein VCG_002439 [Vibrio cholerae 12129(1)] Length = 377 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 119/391 (30%), Gaps = 26/391 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L ++TP++ + N + + + ALK S V + G Sbjct: 2 LKDELRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTS 61 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E++ E +S D ++ FN +S L + Sbjct: 62 SGPFEVKLGYE-TFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQS-----QLAAYRHLV 115 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 KA + R+NP ++ P Q L A + ++ + Sbjct: 116 EGKASLGLRINPGVS----------YAGQDLANPARQFSRLGVQADHIDESVFDSINGVM 165 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + LL ++++ + + +GGG+ + + + Sbjct: 166 FHINCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVEKLGAAL 221 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 222 KAFAERHAVQLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEP 281 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + A D+ I C GD + + + G L+I + Y V+ Sbjct: 282 ASVL----EASDKGQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLN 337 Query: 381 TYNSRLLIPEIM-VNGSQFHIIRPRMTFQEL 410 +N + Q I +++ Sbjct: 338 WFNGLKMPSVYCERKNGQIQKINQ-FGYEDF 367 >gi|123416580|ref|XP_001304924.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein [Trichomonas vaginalis G3] gi|121886409|gb|EAX91994.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein [Trichomonas vaginalis G3] Length = 192 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 56/165 (33%), Positives = 92/165 (55%), Gaps = 4/165 (2%) Query: 224 LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADV 283 RS G N++ +DVGGGLG++Y + + P Y + ++ +I E GR ++ Sbjct: 21 YRSKGINVKILDVGGGLGVSYTNPNLLPDFEKYFKIFSSLSPKVE-EIHFELGRSIICQC 79 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G LVTK++ IK+ ++ F I+D M + +RP LY+A+H + + +P D D+VGP Sbjct: 80 GSLVTKLLYIKQGMERNFAIVDGGMTELIRPALYNAFHLVENVTHPGND---YEFDVVGP 136 Query: 344 ICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 +CE+ D IA + K+ + GD + I GAYG + +Y R + Sbjct: 137 VCESSDVIAHSVKMGDAKRGDYVIIRSAGAYGESMASSYLCRDIP 181 >gi|91227179|ref|ZP_01261638.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus 12G01] gi|91188707|gb|EAS74995.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus 12G01] Length = 377 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 113/369 (30%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + + +N D + ALK S V + G Sbjct: 4 NELKTPYFMINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D D+A FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVRDVADICDKMIFNSQS-----QLAAYRHIVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA I R+NP ++ P Q L A + G+D + Sbjct: 118 KASIGLRLNPGMS----------YAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++ Q + + +GGG+ + + Sbjct: 168 MNCENKDVDAFIGLLDAISDQFGEYLDKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 224 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I A + I C GD + G L+I + Y V+ + Sbjct: 284 IL----EASENGEHEYVIGSCSCLAGDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEI 391 N + Sbjct: 340 NGLRMPSVY 348 >gi|254250509|ref|ZP_04943828.1| Diaminopimelate decarboxylase [Burkholderia cenocepacia PC184] gi|124879643|gb|EAY66999.1| Diaminopimelate decarboxylase [Burkholderia cenocepacia PC184] Length = 402 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 61/379 (16%), Positives = 117/379 (30%), Gaps = 21/379 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI-KTLAHLGSGLDIVSEGE 85 TP Y Y Y + + T + +LKAN NQ ++ + G+++ S GE Sbjct: 32 TPCYVYEPEIAIARYRSLKA---RLGTRLIVSLKANPNQDMLARCAHAYEDGVELASRGE 88 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY--CFNVESESELKTLNQRAVSLGKK 143 L + R + + + + + + A Sbjct: 89 LDAVIGRIKTP-RYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLARESAAGGSTP 147 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + RVN A + FG+ ++ H + ++G+ + G Sbjct: 148 GAVLLRVNAGALAGEQARALWHDH---FGMTPNEAHDAVRTLAAAGLP-VAGLHVFSGPH 203 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQ 262 + + L+ + + G L + P + + Sbjct: 204 SFIRQDPTQPDTLVLPELLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFDRYAAAL 263 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH- 321 + E GR + AD G+ T+V+++K D+T + D ++ ++ Sbjct: 264 APLAGPYSLAHESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMR 323 Query: 322 ----EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY--G 375 PA + VG C D I + A P+ GD+ E+ GAY Sbjct: 324 RLAAPSLVRRTPAPPPRGVPTLYVGSTCSRADVIGRDDAGAPPQVGDIAVFERCGAYHRT 383 Query: 376 AVQSGTYNSRLLIPEIMVN 394 + + S + V Sbjct: 384 YSMA-HFLSH-EAAHVYVR 400 >gi|167568677|ref|ZP_02361551.1| pyridoxal-dependent decarboxylase family protein [Burkholderia oklahomensis C6786] Length = 398 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 127/387 (32%), Gaps = 36/387 (9%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP Y + + Y A T + +LKANS+ + ++ G+++ S+GE Sbjct: 27 TPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQGE 83 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L + + + S + + + + + + Sbjct: 84 LDTV--VGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + A+ K + FG+ + + A T G +++G+ +GS Sbjct: 142 LRINAGALLGAHAPKSLRDH-----FGMTPAEALGM-ANLLTQAGRRVAGLHAFVGSGNF 195 Query: 206 --------QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +S A+ L + Q + H+++GGG H D Sbjct: 196 RAGPTKGGDADSADLAWALAQLAEQIESLVRAPVTHLNLGGGFSEKGHDDATFERYR--- 252 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR---- 313 + ++ E GR + A+ G+ VT+V ++K D+ + D M+ Sbjct: 253 --ARIAPLAKRYTLVHEAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKT 310 Query: 314 ----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-NRKIALPRPGDLLYI 368 T + + VG C D I R LP+PGD + Sbjct: 311 EAVLKTWEAPTLVPAGPADAHRAPNTLPVTFVGNTCNRADVIGRLERHPRLPQPGDFVVF 370 Query: 369 EKTGAYGAVQS-GTYNSRLLIPEIMVN 394 + GAY + + S ++ + Sbjct: 371 SQCGAYHHSYTVSGFLSH-KPAQVYIR 396 >gi|315179977|gb|ADT86891.1| Diaminopimelate decarboxylase [Vibrio furnissii NCTC 11218] Length = 411 Score = 94.9 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 115/369 (31%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + N D + ALK S V + G Sbjct: 38 NELKTPYFMIDEGKLIANLEIAKRLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 97 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++A FN +S L+ + Sbjct: 98 PFEVKLGHD-TFGGETHAYSVGYSEDDVKEVADICDKMIFNSQS-----QLSAYRHLVEG 151 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA + R+NP ++ P Q L A + ++ + Sbjct: 152 KASLGLRLNPGVS----------YAGQDLANPARQFSRLGVQADHIDPAVFETINGVMFH 201 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++++ + + + + +GGG+ + + Sbjct: 202 MNCENKDVDAFINLLDSISERFGAYLNTLDWVSLGGGVFFTWPG----YDVEKLGFALKA 257 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 258 FAEKHGVQLYLEPGEAVITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPAS 317 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + A + I C GD + + + G L+I + Y V+ + Sbjct: 318 VL----EASESGEHEYVIGSCSCLAGDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWF 373 Query: 383 NSRLLIPEI 391 N + Sbjct: 374 NGLKMPSVY 382 >gi|319953364|ref|YP_004164631.1| orn/dap/arg decarboxylase 2, c-terminal protein [Cellulophaga algicola DSM 14237] gi|319422024|gb|ADV49133.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Cellulophaga algicola DSM 14237] Length = 466 Score = 94.9 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 53/446 (11%), Positives = 125/446 (28%), Gaps = 41/446 (9%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLTFSNAFD--------GMDT 53 F +L+ + L L +P + Y I +N F Sbjct: 19 EFTLEGENLNFHGIPLMDLVEKYGSPMKFTY-LPKISENINRAKAWFKIAMEKNDYKGKY 77 Query: 54 MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K++ Q V+ + + ++ S ++ + + V + D Sbjct: 78 HYCYCTKSSHFQPVLNEVLNNDVHIETSSAYDINIVEKLKKKGKIKDDTYVICNGFKRDE 137 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 + + N + + ++ I I A+ + Sbjct: 138 YIDNIGRLINEGHRNCIPIIDNYEEIDLLSDVIGDTFKVGIRIASEEEPKFEFYTSRLGI 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + V++ + I + I + + +L+ ++ Sbjct: 198 GYKNIVPFYENQIKDNDKVELKMLHFFINTGIRDNAYYWNELVKCLKVYIRLKKMCPSLD 257 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGIL 286 +++GGG I +I+Q Q I E G F V + G Sbjct: 258 SLNIGGGFPIKNSLAFDYDYQYMIDEIINQINIACQEAEVPVPHIFTEFGSFTVGESGGA 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +++ K+ D+ + + P + + + + G C+ Sbjct: 318 IYEILYQKQQNDREKWNMIDSSFITTLPDTWAINKRFVMLPINRWQDEYERVLLGGLTCD 377 Query: 347 TGD-----------FIALNRKIALPRPGDLLYIEKTGAYGAVQSG----TYNSRLLIPEI 391 + D ++ R+ G TGAY G + I Sbjct: 378 SDDYYNSEQNMNAIYLPKYRRDKPLFIG----FFNTGAYQESIGGYGGLQHCLIPQPKHI 433 Query: 392 MVNGSQ-----FHIIRPRMTFQELIE 412 +++ + + + ++L++ Sbjct: 434 LIDRDENGKLTTKLFNEQQKAEDLLK 459 >gi|262171366|ref|ZP_06039044.1| carboxynorspermidine decarboxylase putative [Vibrio mimicus MB-451] gi|261892442|gb|EEY38428.1| carboxynorspermidine decarboxylase putative [Vibrio mimicus MB-451] Length = 377 Score = 94.5 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 55/389 (14%), Positives = 121/389 (31%), Gaps = 26/389 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + N + + + ALK S V + G Sbjct: 4 NELKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIQPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++ FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVKEVVDICDKMIFNSQS-----QLAAYRHLVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA + R+NP ++ + +K + G+ A + +D + Sbjct: 118 KASLGLRINPGVSYAGQDLANPARKFSRLGV----------QADHIDDSVFETIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++++ + + +GGG+ + + + Sbjct: 168 MNCENKDVDAFISLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVDKLGAALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 224 FSERHGVQLYLEPGEAVITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + A D I C GD + + + G L+I + Y V+ + Sbjct: 284 VL----EASDNGQHEYVIGSCSCLAGDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 N + + I +++ Sbjct: 340 NGLKMPSVYCERQNGEIQKINQ-FGYEDF 367 >gi|73537520|ref|YP_297887.1| Orn/DAP/Arg decarboxylase 2 [Ralstonia eutropha JMP134] gi|72120857|gb|AAZ63043.1| Orn/DAP/Arg decarboxylase 2 [Ralstonia eutropha JMP134] Length = 482 Score = 94.5 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 79/414 (19%), Positives = 116/414 (28%), Gaps = 41/414 (9%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLG 75 L +P A+ N + Y K N +QA++K G Sbjct: 56 LAAAVAQYGSPLNVLWPHALRNNVAALRAVLATHCVQAEIFYGAKVNKSQALVKAAVMAG 115 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES-ELKTLN 134 G+D+ S ELR AL A A RI +G KT + L G E + Sbjct: 116 VGIDVSSRHELRDALRAGADALRICATGPAKTEAFHEQLLAHGALISVDSLEELDDVCAC 175 Query: 135 QRAVSLGKKAPIAFRVNPDINANT------------------------HKKISTGKKEDK 170 R G+ A + R PD + + Sbjct: 176 LRRAPAGRHARVLLRYCPDSARGSRFGMAADTVVQGLKHIASATERLAFEGFHFHLSGYG 235 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ--IDQIESFHKAFKLLRDLTQQLRSNG 228 + + L + ++ + IG + ++ L + R+ Sbjct: 236 WETRAQALRELLPLIDAADSMGLTTTMIDIGGGLPVRYVDPDVYTEFLQSQRPEHYRNGI 295 Query: 229 HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVT 288 GG + A D + I + + LEPGR L A GI V Sbjct: 296 VPASFYPYGGHIDAATWLDDFLNAPCTAGQSIAAWLRAGGVTLALEPGRCLAAQAGITVF 355 Query: 289 KVISIKKSADKTFV------ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVG 342 +V K D V F L D G R I G Sbjct: 356 RVTRSKPLGDGRHVVFVEGSSFSACETWFASEFLADPAWISAVPPRTVGARPVQAY-IAG 414 Query: 343 PICETGDFIALNRKIA---LPRPGDLLYIEKTGAYGAV-QSGTYNSRLLIPEIM 392 C D + NR + LP PGDLL T Y ++ + + Sbjct: 415 HSCLDEDVLT-NRLLPFGGLPHPGDLLVYANTAGYQMDLLENEFHRHPMPRRVA 467 >gi|253317600|gb|ACT22738.1| ornithine decarboxylase [Oncorhynchus mykiss] Length = 291 Score = 94.5 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 85/242 (35%), Gaps = 19/242 (7%) Query: 165 GKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL 224 + KFG + L A L + GV H+GS +++ +A R + Sbjct: 7 CRLSVKFGATLKACRGLLERAKELGL-DVIGVSFHVGSGCTDPDTYSQAISDARCVFDMG 65 Query: 225 RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVAD 282 G N+ +D+GGG + + + + + + + +II EPGR+ VA Sbjct: 66 SEVGFNMTLLDIGGGFPGSEDTKLKFEEITAVINPALDKYFPADSGIRIIAEPGRYYVAS 125 Query: 283 VGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY----------------DAYHEINYI 326 L +I+ K ++ + R +Y A+ Sbjct: 126 AYTLAVNIIAKKVIMNEQSASDEDDDWTSDRTLMYYVNDGVYGSFNCILYDHAHPLPILH 185 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 P D H I GP C+ D IA + + G+ L E GAY S T+N Sbjct: 186 KKPKPDERMYHCSIWGPTCDGLDRIAEMCTLPDMQVGEWLLFENMGAYTVAASSTFNGFQ 245 Query: 387 LI 388 Sbjct: 246 KP 247 >gi|107028395|ref|YP_625490.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia AU 1054] gi|116686391|ref|YP_839638.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia HI2424] gi|105897559|gb|ABF80517.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia AU 1054] gi|116652106|gb|ABK12745.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia HI2424] Length = 391 Score = 94.5 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 61/379 (16%), Positives = 117/379 (30%), Gaps = 21/379 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI-KTLAHLGSGLDIVSEGE 85 TP Y Y Y + + T + +LKAN NQ ++ + G+++ S GE Sbjct: 21 TPCYVYEPEVAIARYRSLKA---RLGTRLIVSLKANPNQDMLARCAHAYEDGVELASRGE 77 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY--CFNVESESELKTLNQRAVSLGKK 143 L + R + + + + + + A Sbjct: 78 LDAVIGRIKTP-RYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAAAGGSTP 136 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + RVN A + FG+ ++ H + ++G+ + G Sbjct: 137 GAVLLRVNAGALAGEQARALWHDH---FGMTPNEAHDAVRTLAAAGLP-VAGLHVFSGPH 192 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQ 262 + + L+ + + G L + P + + Sbjct: 193 SFIRQDPTQPDTLVLPELLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFDRYAAAL 252 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH- 321 + E GR + AD G+ T+V+++K D+T + D ++ ++ Sbjct: 253 APLAGPYSLAHESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMR 312 Query: 322 ----EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY--G 375 PA + VG C D I + A P+ GD+ E+ GAY Sbjct: 313 RLAAPSLVRRTPAPPPRGVPTLYVGSTCSRADVIGRDDAGAPPQVGDIAVFERCGAYHRT 372 Query: 376 AVQSGTYNSRLLIPEIMVN 394 + + S + V Sbjct: 373 YSMA-HFLSH-EAAHVYVR 389 >gi|312887815|ref|ZP_07747402.1| Orn/DAP/Arg decarboxylase 2 [Mucilaginibacter paludis DSM 18603] gi|311299634|gb|EFQ76716.1| Orn/DAP/Arg decarboxylase 2 [Mucilaginibacter paludis DSM 18603] Length = 464 Score = 94.5 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 57/423 (13%), Positives = 130/423 (30%), Gaps = 28/423 (6%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMD----TM 54 F+ ++ L+ +++L ++ TP + Y I K F A + Sbjct: 19 FEVYDDELYFHDLNLMEMIETYGTPLRFTY-LPIISKKIQQAKLLFQQAIIKNNYRGTYK 77 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 CY K++ + +++ L+ S ++ A V + Sbjct: 78 YCYCTKSSHFKHIVEEALKNEIHLETSSAFDMPMIDALEKKGLLNKEMTVICNGFKTFQY 137 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN---ANTHKKISTGKKEDKF 171 Q I + + + L+ + + ++ A + S Sbjct: 138 KQYIIDMLHDGFSNIIPVLDNKEEFNIYDDEVEMSTPCNLGIRIAAEEQPDSQFYTSRLG 197 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 I Y P ++ + I S I + + L + + ++ Sbjct: 198 VRIEDVIDFYYNKIEKNPNFRVKLLHFFINSGISDTPYYWNELEKYVTLYCKFKKINPDL 257 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASL------IHQYFGNLQCKIILEPGRFLVADVGI 285 +D+GGG+ + I ++ II E G++ VA+ Sbjct: 258 DTLDIGGGMPFKDSLVFDFDYEYMVNEIVSRIKEICAEHDVMEPDIITEFGKYTVAEASG 317 Query: 286 LVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 ++ KV+ K+ D+ ++ P ++ + + D + ++ G C Sbjct: 318 ILYKVLGRKQQNDRERWLMLDGSFITNLPDVWALNQKYVLLPINNWDSEYERVNLGGITC 377 Query: 346 ETGDFI-----ALNRKIALPRPGDLLYIEKTGAYGAVQSG----TYNSRLLIPEIMVNGS 396 + D+ + + R + TGAY V SG + +++ + Sbjct: 378 DGQDYYNQEAHMNSVFMPKTRKVQYVGFFHTGAYQEVLSGYGGIHHCLLPSPKHVIIRRN 437 Query: 397 QFH 399 + Sbjct: 438 RDE 440 >gi|288541506|gb|ADC45578.1| lysine/ornithine decarboxylase [Streptomyces nanchangensis] Length = 396 Score = 94.1 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 82/385 (21%), Positives = 149/385 (38%), Gaps = 32/385 (8%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 + T IE+ Y + G V +A+KA V+ LA G+G+D S E+ +AL Sbjct: 14 VFDLTGIEERYESLLRELPG--VAVRFAMKACPVDEVLARLAGAGAGVDAASVPEMEQAL 71 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A VP R+ + K+ I A + GI F +S ++ + + A + Sbjct: 72 RAGVPIGRVHYGNTVKSDRNIADAHRLGIRDFATDSLEDVAAIAEHAPGARVFCRLT--- 128 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 T + + + K+G ++ A L V SG+ +H+GSQ E++ Sbjct: 129 -------TDTRGALWELSGKYGCSTADAVTILETARKLGLV-PSGLSVHVGSQQMAPEAW 180 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGL----GIAYHSDHRPPSSSDYASLIHQYFGN 266 AF+ L D+ L +G + HI++GGGL + H P ++I + + Sbjct: 181 RDAFERLADVLAALDHHGIALDHINLGGGLPVPGYLDKHGRPLDPPIDKLFAVIREGMAH 240 Query: 267 ------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 ++EPGR+LVA G + V + + Sbjct: 241 LRTIGGHHLAFVVEPGRYLVAGQGAIRAHVSRLSARRGPDGRRQYWLYLSCGKFNGLYEM 300 Query: 321 ----HEINYIVNPAGDRLHIHADIVGPICETGDFIALN---RKIAL-PRPGDLLYIEKTG 372 + + + + H+ A + GP C++ D + ++ GD +++ G Sbjct: 301 DELQYPLVFPTHGGPGTRHVPAVVAGPTCDSDDAYSHQDGLVQVPEALASGDPVWVLSCG 360 Query: 373 AYGAVQSGT-YNSRLLIPEIMVNGS 396 AY + +N +P ++G Sbjct: 361 AYAISYTTQGFNGFGPLPYTCIDGG 385 >gi|260768269|ref|ZP_05877203.1| carboxynorspermidine decarboxylase putative [Vibrio furnissii CIP 102972] gi|260616299|gb|EEX41484.1| carboxynorspermidine decarboxylase putative [Vibrio furnissii CIP 102972] Length = 411 Score = 94.1 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 115/369 (31%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + N D + ALK S V + G Sbjct: 38 NELKTPYFMIDEGKLIANLEIAKRLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 97 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++A FN +S L+ + Sbjct: 98 PFEVKLGHD-TFGGETHAYSVGYSEDDVKEVADICDKMIFNSQS-----QLSAYRHLVEG 151 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA + R+NP ++ P Q L A + ++ + Sbjct: 152 KASLGLRLNPGVS----------YAGQDLANPARQFSRLGVQADHIDPAVFETINGVMFH 201 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++++ + + + + +GGG+ + + Sbjct: 202 MNCENKDVDAFINLLDSISERFGAYLNTLDWVSLGGGVFFTWPG----YDVEKLGLALKA 257 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 258 FAEKHGVQLYLEPGEAVITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPAS 317 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + A + I C GD + + + G L+I + Y V+ + Sbjct: 318 VL----EASESGEHEYVIGSCSCLAGDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWF 373 Query: 383 NSRLLIPEI 391 N + Sbjct: 374 NGLKMPSVY 382 >gi|317506305|ref|ZP_07964119.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC BAA-974] gi|316255399|gb|EFV14655.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC BAA-974] Length = 454 Score = 94.1 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 72/422 (17%), Positives = 139/422 (32%), Gaps = 52/422 (12%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLG 75 L+++A F+ +N F F ++ +V +A KAN + A ++ +A G Sbjct: 21 LQQIADGAGGAFHVVHPPTFARNLADFQAVFTEFEIEGLVYFAKKANKSTAWLRAVAEAG 80 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G+D+ S GE R AL V E++V +G K+ + + LA++ G + + EL L + Sbjct: 81 AGVDVASLGEFRSALGHGVRGEKLVVTGPAKSDELLWLAVRHG----ALIAVDELSELER 136 Query: 136 RAVSLGKKAPIAFR-----------------------VNPDINANTHKKISTGKKEDKFG 172 ++ P+ V+ +A ++ Sbjct: 137 AIAFGSQEQPVRVLLRAVAAEQPDTRFGMSGPERKAAVHRCADAGAAVRMEGFSLHLSGY 196 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 P+ + A + + G+ S + + + + + + Sbjct: 197 DPLARAVKAGRLAVEIGQARALGLPADTISIGGGFAVDYVRQEDWEAFQAETGPSQFHAK 256 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL------------EPGRFLV 280 GG + S +L+ I EPGR L+ Sbjct: 257 KEFPGGFYPYHSPVSGAGALAEVLTSRYGSEGPDLREATIAEALRAKGIKLAVEPGRALL 316 Query: 281 ADVGILVTKVISIKKSADKTFVILD--VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 AD G+ V +V K + I + + G + + Sbjct: 317 ADAGVSVFEVQGFKWREHLQYGIATVAGTSLSLSEQWFASEFLPEPRLWPEGGAQQRTPS 376 Query: 339 DIVGPICETGDFIALNRKIALPRP---GDLLYIEKTGAYGAVQSGT---YNSRLLIPEIM 392 + G C D + RK+ LPRP GD L T Y ++ + +++ Sbjct: 377 AVGGTSCLDSDMLTW-RKLPLPRPPKRGDFLVYPNTAGYQ--MDSNESAFHELPIPKKVV 433 Query: 393 VN 394 ++ Sbjct: 434 LD 435 >gi|262402317|ref|ZP_06078878.1| carboxynorspermidine decarboxylase putative [Vibrio sp. RC586] gi|262351099|gb|EEZ00232.1| carboxynorspermidine decarboxylase putative [Vibrio sp. RC586] Length = 377 Score = 94.1 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 56/389 (14%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + N + + + ALK S V + G Sbjct: 4 NELKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++ FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVKEVIDICDKMIFNSQS-----QLAAYRHLVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA + R+NP ++ P Q L A + +D + Sbjct: 118 KASLGLRINPGVS----------YAGQDLANPARQFSRLGVQADHIDEGVFDTIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++++ + + +GGG+ + + + Sbjct: 168 MNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVDKLGAALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 224 FAERHAVQLYLEPGEAVITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + A D I C GD + + + G L+I + Y V+ + Sbjct: 284 VL----EASDNGQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQQLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 N + + I +++ Sbjct: 340 NGLKMPSVYCERQNGEIQKINQ-FGYEDF 367 >gi|207110799|ref|ZP_03244961.1| diaminopimelate decarboxylase [Helicobacter pylori HPKX_438_CA4C1] Length = 82 Score = 94.1 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 36/74 (48%), Positives = 49/74 (66%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 E+L +TPFY Y I++ +L + AF G +++CYALKANSN +++ LAHL SG Sbjct: 7 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 66 Query: 79 DIVSEGELRRALAA 92 D VS GE+ RAL A Sbjct: 67 DCVSIGEIYRALKA 80 >gi|387499|gb|AAA39846.1| ornithine decarboxylase (EC 4.1.1.17) [Mus musculus] Length = 284 Score = 93.7 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 77/221 (34%), Gaps = 17/221 (7%) Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + GV H+GS E+F +A R + G ++ +D+GGG + + + Sbjct: 11 NIDVIGVSFHVGSGCTDPETFVQAVSDARCVFDMATEVGFSMHLLDIGGGFPGSEDTKLK 70 Query: 250 PPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD--------- 298 + + + + +II EPGR+ VA L +I+ K Sbjct: 71 FEEITSVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQPGSDDED 130 Query: 299 ------KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + + D F A+ + P D + + I GP C+ D I Sbjct: 131 ESNEQTFMYYVNDGVYGSFNCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIV 190 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GD + E GAY + T+N V Sbjct: 191 ERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYYV 231 >gi|84386971|ref|ZP_00989995.1| carboxynorspermidine decarboxylase [Vibrio splendidus 12B01] gi|84378261|gb|EAP95120.1| carboxynorspermidine decarboxylase [Vibrio splendidus 12B01] Length = 377 Score = 93.7 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 49/366 (13%), Positives = 104/366 (28%), Gaps = 24/366 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + + N + + ALK S V + G Sbjct: 4 NELKTPYFMINEDKLIANLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++A FN +S+ E Sbjct: 64 PYEVKLGHE-TFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQFEAYRH--------- 113 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 V + P Q L A + ++ + Sbjct: 114 ------IVEGKASLGLRLNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDEINGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL +++Q + + + +GGG+ + + Sbjct: 168 MNCENKDVDAFIGLLESISEQFGEHLDKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 224 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + I C GD + G L++ + Y V+ + Sbjct: 284 VLEASENGS----HDYVIGSCSCLAGDQFCEASFDEPLKIGQKLHLLDSAGYTMVKLNWF 339 Query: 383 NSRLLI 388 N + Sbjct: 340 NGLKMP 345 >gi|148978918|ref|ZP_01815238.1| carboxynorspermidine decarboxylase [Vibrionales bacterium SWAT-3] gi|145962116|gb|EDK27402.1| carboxynorspermidine decarboxylase [Vibrionales bacterium SWAT-3] Length = 377 Score = 93.7 bits (231), Expect = 6e-17, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 104/366 (28%), Gaps = 24/366 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + + N + + ALK S V + G Sbjct: 4 NELKTPYFMINEDKLVANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+R E +S D ++A FN +S+ E Sbjct: 64 PYEVRLGHE-TFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQFEAYRH--------- 113 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 V + P Q L A + ++ + Sbjct: 114 ------IVEGKASLGLRLNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDEINGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL +++Q + + + +GGG+ + + Sbjct: 168 MNCENKDVDAFIGLLDSISEQFGEHLDKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 224 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + I C GD + G L++ + Y V+ + Sbjct: 284 VLEASENGS----HDYVIGSCSCLAGDQFCETSFDEPLKIGQKLHLLDSAGYTMVKLNWF 339 Query: 383 NSRLLI 388 N + Sbjct: 340 NGLKMP 345 >gi|115622692|ref|XP_001202483.1| PREDICTED: similar to ornithine decarboxylase, partial [Strongylocentrotus purpuratus] gi|115631770|ref|XP_793810.2| PREDICTED: similar to ornithine decarboxylase, partial [Strongylocentrotus purpuratus] Length = 365 Score = 93.7 bits (231), Expect = 6e-17, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 95/304 (31%), Gaps = 20/304 (6%) Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E+++ L V RI+F+ K + A + + +++E+EL + + Sbjct: 1 NEIQQVLKIGVSPSRIIFANPCKQRSHLKYAADNDVRLMTIDNEAELIKIKKIFPHAKLV 60 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 I T + + KFG +L +A L + GV H+GS Sbjct: 61 LRIL----------TDDSTAQCQLGLKFGCHPRHAPALLRFAQDLEL-DVVGVSFHVGSG 109 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 ++ + + ++L G + +D+GGG + + S H+ Sbjct: 110 CRDPMTYVDSIRNSKELFDFGNDLGFKMNLLDIGGGFPGQESAPIKFEEVSSQLDWFHES 169 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + VA + + D F A E Sbjct: 170 KVIKYFPSPNDLVANTVAPSKC---------DEPAFMYYVNDGVYGSFNCLLFDHAEVEA 220 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 + GD + GP C+ D I N + G+ L + GAY S +N Sbjct: 221 QLLKERDGDVQMYSTSVWGPSCDGIDRIIENHLMPELEVGEWLIFQDMGAYTMCASSEFN 280 Query: 384 SRLL 387 Sbjct: 281 GFKR 284 >gi|332881893|ref|ZP_08449535.1| Pyridoxal-dependent decarboxylase, sheet domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680128|gb|EGJ53083.1| Pyridoxal-dependent decarboxylase, sheet domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 463 Score = 93.3 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 51/445 (11%), Positives = 116/445 (26%), Gaps = 37/445 (8%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 F L N+ L +L P I +N F A Sbjct: 18 DEFTLDGDELRFHNIDLMELVRQYGAPLKFMYLPKISENIQRAKKWFEKAIKKHKYKGEY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA----ERIVFSGVGKTID 109 CY K++ + V+ ++ S ++ E + K Sbjct: 78 NYCYCTKSSHFKHVMVEALKNDIHMETSSAFDINIINNLISEGLINKESHILCNGFKRDA 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 ID ++ K + + + + T + Sbjct: 138 YIDGIADLINRGYHNCIPIIDNYEEINLFEEKIKDKYSIGIRIASEEDPRSEFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + + P V++ + I + I + + QL+ Sbjct: 198 GYKNIL---PFYNREIKDNPKVRLKMLHFFINTGIKDNAYYWNELLKCLRVYIQLKKVAP 254 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC------KIILEPGRFLVADV 283 + +++GGG I + +I Q I E G F V + Sbjct: 255 ELDSLNIGGGFPIKSSLAFEYDYAYMVDEIIRQIKITCDQEKVPVPNIFTEFGSFTVGEA 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G + +++ K+ D+ + + P + + + + + G Sbjct: 315 GGAIYEIMYQKQQNDREKWDMINSSFITTLPDSWAINKRFVLLPINRWNDEYERVLLGGL 374 Query: 344 ICETGDFI-----ALNRKIALPRPGD--LLYIEKTGAY----GAVQSGTYNSRLLIPEIM 392 C+ D+ + + TGAY G V + ++ Sbjct: 375 TCDGDDYYNSEQNMNAIYLPKYNKNKPLYIGFFNTGAYQDSIGGVGGLQHCLIPQPKIVL 434 Query: 393 VNGSQ-----FHIIRPRMTFQELIE 412 ++ + + + +++++ Sbjct: 435 IDKDKDGKITSRLFMEQQKAEDMLK 459 >gi|120437944|ref|YP_863630.1| arginine decarboxylase [Gramella forsetii KT0803] gi|117580094|emb|CAL68563.1| arginine decarboxylase [Gramella forsetii KT0803] Length = 467 Score = 93.3 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 51/445 (11%), Positives = 119/445 (26%), Gaps = 39/445 (8%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 F L ++ L +L P + Y I +N F +A + D Sbjct: 19 EFNLDGAELKFHDIDLMELVRTYGAPLKFTY-LPKISQNINRAKDWFKSAIEKHDYKGSY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA----ERIVFSGVGKTID 109 CY K++ + V+ ++ S ++ +R V K Sbjct: 78 NYCYCTKSSHFEHVLNEALKNDIHIETSSAFDINIVEKLKKAGKISDDRWVICNGFKRDQ 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 I+ + +S + + T + Sbjct: 138 YIENISRLLNGGHKNCLPIIDNYEELDLLSEKIDDKFQVGIRIASEEEPKFEFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + + V++ + I + I + + L+ Sbjct: 198 GYKN---IVPFYNKQIKENDQVELKMLHFFINTGIRDTAYYWNELNKCLKVYIALKKVAP 254 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADV 283 ++ +++GGG I + +I+ I E G F V + Sbjct: 255 HLDSLNIGGGFPIKNSLAFEYDYAYMVDEIINHIKLTCDDAEVDVPNIFTEFGSFTVGES 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G + +V+ K+ D+ + + P + + + + + + G Sbjct: 315 GGAIYEVLYQKQQNDREKWNMINSSFITTLPDTWAISKKFVMLAVNRWNDEYERVLLGGL 374 Query: 344 ICETGDFI-----ALNRKIALPRPGD--LLYIEKTGAYGAVQSG----TYNSRLLIPEIM 392 C++ D+ + + + TGAY G + I+ Sbjct: 375 TCDSDDYYNSEQHTNAIYLPKFKKEKPLYIGFFNTGAYQDTIGGFGGLQHCLIPQPKHIL 434 Query: 393 VNGSQ-----FHIIRPRMTFQELIE 412 +N + + ++++ Sbjct: 435 INKDENGQLNTRLFSEEQNHEDMLN 459 >gi|50123034|ref|YP_052201.1| putative lysine/ornithine decarboxylase [Pectobacterium atrosepticum SCRI1043] gi|49613560|emb|CAG77011.1| putative lysine/ornithine decarboxylase [Pectobacterium atrosepticum SCRI1043] Length = 467 Score = 93.3 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 65/422 (15%), Positives = 117/422 (27%), Gaps = 38/422 (9%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT--MVCYALKANSNQAVIKTLAHL 74 L L +P + N D + Y K N + +++ + Sbjct: 42 RLSWLVEQYGSPLNIVWPHTVTNNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNA 101 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDE-IDLALQSGIYCFNVESESELKTL 133 G G+D+ S EL+ AL A R+ +G KT + +L + + E + Sbjct: 102 GIGVDVSSLQELKDALRAGCDGARLCATGPAKTREFLTELVHHRALIVLDSPEEFDDVLA 161 Query: 134 NQRAVSLGKKAPIAFRVNPDI------------------------NANTHKKISTGKKED 169 + + K + R P + + Sbjct: 162 LAALLRVTKPVRVLLRYRPSFAQASRFGMLADEVARCLETLSTRQDVLHLEGFHFHLGGY 221 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + + + + + IG + ++ + Sbjct: 222 APDTRVAALAEVLPLLERARSRGLQPTMIDIGGGLPIQYLSASRYQAYLAEQNEADYRHG 281 Query: 230 NIQHIDVG-GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVT 288 + GG A S+S + + +EPGR L I V Sbjct: 282 QVPTSFYPYGGERSAADYLEAFLSASIGQHCVANILKQHGLILAIEPGRSLADQSAITVF 341 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYD----AYHEINYIVNPAGDRLHIHADIVGPI 344 +V ++ D V+ + T ++ + V A I G Sbjct: 342 RVTRTRRQPDGNHVVFVEGSSFSACETWFNSEFLIDPLHVFSVKKDTRPTPGKAWIAGHS 401 Query: 345 CETGDFIALNRKIA---LPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEI-MVNGSQFH 399 C D I NR I +P+PGDLL T Y ++ L + G + Sbjct: 402 CLDDDVIT-NRLIHFQTVPQPGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGE 460 Query: 400 II 401 +I Sbjct: 461 LI 462 >gi|325955691|ref|YP_004239351.1| Orn/DAP/Arg decarboxylase 2, N-terminal protein [Weeksella virosa DSM 16922] gi|323438309|gb|ADX68773.1| Orn/DAP/Arg decarboxylase 2, N-terminal protein [Weeksella virosa DSM 16922] Length = 464 Score = 93.0 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 58/445 (13%), Positives = 124/445 (27%), Gaps = 43/445 (9%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 F +LH + L KL TP + Y I +N F++A ++ Sbjct: 19 EFDLVGENLHFNGIDLMKLIEEHGTPLKFTY-LPKISQNIQRAKSWFNDARKKLNYQGTY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 CY K++ + +IK ++ S ++ + V + + Sbjct: 78 NYCYCTKSSHFRHIIKEALKNDIHIETSSAYDINIVESLLNEGLMNHDQYVICNGFKREE 137 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFG 172 +++ N + ++ I I A+ + Sbjct: 138 YVENIARLINNGHRKTITVIDNYEEVELFSDAIEGDFEIGIRIASEEEPKFEFYTSRLGI 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + +K+ + I + I + + L+ + Sbjct: 198 GYKDIVPFYNNMVKPNERIKVKMLHFFINTGIKDNSYYWNELVKCLRVYVNLKKVCPELD 257 Query: 233 HIDVGGGLG------IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 +++GGG Y + G I E G F V + G + Sbjct: 258 SLNIGGGFPIKNSLTFEYDYAYMAEEILGQIKKFCDEEGIPVPNIFTEFGSFTVGESGGM 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + KV+ KK DK + + + P + + + + G C+ Sbjct: 318 IYKVLYQKKQNDKEYWDMIDSSFMTTLPDAWAISKRFVMLPLNRWYDTYERVLLGGLTCD 377 Query: 347 TGDFI-----ALNRKIALPRPGD-----LLYIEKTGAY--------GAVQSGTYNSRLLI 388 + D+ + D + TGAY G + Sbjct: 378 SDDYYNSEQHVNAIYLPKY---DSAKPLYIGFFNTGAYQDNISGFDGV----HHCLIPQP 430 Query: 389 PEIMVNGS-QFHIIRPRMTFQELIE 412 I+++ + Q + +Q +++ Sbjct: 431 KYILIDENYQVEVFYQEQDYQSVLK 455 >gi|209695577|ref|YP_002263506.1| carboxynorspermidine decarboxylase [Aliivibrio salmonicida LFI1238] gi|208009529|emb|CAQ79821.1| carboxynorspermidine decarboxylase [Aliivibrio salmonicida LFI1238] Length = 381 Score = 93.0 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 119/368 (32%), Gaps = 24/368 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 ++TP++ + N + + ALK S V + G Sbjct: 9 ELKTPYFMIDEAKLIANLEVAKRLKEQSGVKLVLALKCFSTWGVFDLIKPYLDGTTSSGP 68 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E+R E +S D ++ FN +S L + K Sbjct: 69 YEVRLGHE-TFGGETHAYSVGYSEDDVKEVIEICNKLIFNSQS-----QLTAYRHLVEGK 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + R+NP ++ + ++ + G+ A L ++ + Sbjct: 123 VSVGLRLNPGVSYAGQDLANPAREFSRLGV----------QADRLDTNVFEYINGVMFHM 172 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + +S LL ++ + + ++ + +GGG+ + A+++ + Sbjct: 173 NCENKSVDAFSSLLDAISVRFGTYLDTLEWVSLGGGVFFTWPD----YDVDKLATVLKAF 228 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ I Sbjct: 229 SDKHKVQLYLEPGEAIITKTADLVVSVVDIVENGKKTAIVDSATEAHRLDTLIYNEPASI 288 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 A ++ I C GD + + G L++ + Y V+ +N Sbjct: 289 L----EASEQGQYEYIIGSCSCLAGDQFCETQFEQPLQIGQKLHLLDSAGYTMVKLNWFN 344 Query: 384 SRLLIPEI 391 + Sbjct: 345 RLKMPSVY 352 >gi|291277619|ref|YP_003517391.1| putative carboxynorspermidine decarboxylase, NspC [Helicobacter mustelae 12198] gi|290964813|emb|CBG40669.1| putative carboxynorspermidine decarboxylase, NspC [Helicobacter mustelae 12198] Length = 404 Score = 93.0 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 55/385 (14%), Positives = 103/385 (26%), Gaps = 26/385 (6%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD 79 + + +P Y + N + + ALK + ++ SG Sbjct: 4 DILWDIPSPCYVLEEELLLGNLEILDSIQKSSGAKILLALKGYALHPSFSLISQYLSGTT 63 Query: 80 IVSEGEL----RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL-- 133 E E VFS K + +DL + FN ++ + Sbjct: 64 ASGIHEARLGAEEFGGREKNKEVCVFSPAYKHQEMLDLIEIATHIIFNSFAQWQEFKPLI 123 Query: 134 ----NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 V ++ + R+NP + T + + GI + Sbjct: 124 EQKNKIFRVENKQEIEVGLRLNPLYSEVTPPIYNPCISGSRLGINPSEFQKGVQSYGLEG 183 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + ++ + L + + I+ GGG I Sbjct: 184 I-------SGLHFHTHCEQNSDALARTLVHFERHFGDYIPQMSWINFGGGHHITRKGYDL 236 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 +Y + LEPG + + G L+ +V+ + + ++ A Sbjct: 237 ALLDGIIKDFRKRYNEV---AVFLEPGEAVGWESGFLIGEVVDLIHNGMDIAILDVSATA 293 Query: 310 DFMRPTLYDAY------HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 + + D GP C GD I + G Sbjct: 294 HMPDCLEMPYRPRVRVLNRWGIHQDQGEDVAKYRYRFGGPSCLAGDVIGDYSFDVALQRG 353 Query: 364 DLLYIEKTGAYGAVQSGTYNSRLLI 388 D + E Y V++ T+N L Sbjct: 354 DRVIFEDMMHYTIVKNNTFNGIPLP 378 >gi|170735000|ref|YP_001774114.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia MC0-3] gi|169821038|gb|ACA95619.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia MC0-3] Length = 391 Score = 93.0 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 61/379 (16%), Positives = 117/379 (30%), Gaps = 21/379 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI-KTLAHLGSGLDIVSEGE 85 TP Y Y Y + + T + +LKAN NQ ++ + G+++ S GE Sbjct: 21 TPCYVYEPEVAIARYRSLKA---RLGTRLIVSLKANPNQDMLARCAHAYEDGVELASRGE 77 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY--CFNVESESELKTLNQRAVSLGKK 143 L + R + + + + + + A Sbjct: 78 LDAVIGRIKTP-RYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAAAGGSTP 136 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + RVN A + FG+ ++ H + ++G+ + G Sbjct: 137 GAVLLRVNAGALAGEQARALWHDH---FGMTPNEAHDAVRTLAAAGLP-VAGLHVFSGPH 192 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQ 262 + + L+ + + G L + P + + Sbjct: 193 SFIRQDPTQPDTLVLPERLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFDRYAAAL 252 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH- 321 + E GR + AD G+ T+V+++K D+T + D ++ ++ Sbjct: 253 APLAGPYSLAHESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMR 312 Query: 322 ----EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY--G 375 PA + VG C D I + A P+ GD+ E+ GAY Sbjct: 313 RLAAPSLVRRTPAPPPRGVPTLYVGSTCSRADVIGRDDTGAPPQVGDIAVFERCGAYHRT 372 Query: 376 AVQSGTYNSRLLIPEIMVN 394 + + S + V Sbjct: 373 YSMA-HFLSH-EAAHVYVR 389 >gi|256425177|ref|YP_003125830.1| Orn/DAP/Arg decarboxylase 2 [Chitinophaga pinensis DSM 2588] gi|256040085|gb|ACU63629.1| Orn/DAP/Arg decarboxylase 2 [Chitinophaga pinensis DSM 2588] Length = 465 Score = 93.0 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 50/396 (12%), Positives = 108/396 (27%), Gaps = 26/396 (6%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMV 55 F + L V ++ L TPF I F + Sbjct: 20 FDVQDNYLEFNGVDIKALIDKYGTPFKLTYLPKIGMQINKAKKMFQDAIKKNRYDGNYYY 79 Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 CY K++ +++ G ++ ++ + + V + Sbjct: 80 CYCTKSSHFSFIMEETLKHGIHIETSFAYDIDIVTKLYERKKINKDTFVICNGYKTKPYT 139 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN---ANTHKKISTGKKEDKFG 172 ++ N + + L+ + K I + + A + Sbjct: 140 KAISRLINSGFRNVIPVLDNKEELEDYKKFIRTKDKVKLGLRIAAEEEPTFDFYTSRLGI 199 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + ++ + + I + F + +L QL+ + Sbjct: 200 RSRDVLEFYVDKLKGNEKFELKMLHFFMNKGIKDDIYYWSQFNRVVNLYCQLKKICPELD 259 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGIL 286 I+VGGG I + + ++ + I E G F V + G + Sbjct: 260 SINVGGGFPIKHSLGFDYDYNYIVNEIVANIKSICKKNKVPVPDIYTEFGSFTVGESGAV 319 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + V+ K D+ + + P + + + D+ + + G C+ Sbjct: 320 IYSVVGEKMQNDRENWYMIDSSFITTLPDTWGIGEKFLMLPINKWDQEYQEVHLGGLTCD 379 Query: 347 TGDFIALN-----RKIALPRPGD---LLYIEKTGAY 374 DF + G+ + TGAY Sbjct: 380 GYDFYTSEEHINAVFLPKL-AGEEPLYIGFFHTGAY 414 >gi|115360880|ref|YP_778017.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia ambifaria AMMD] gi|115286208|gb|ABI91683.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia ambifaria AMMD] Length = 391 Score = 93.0 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 62/390 (15%), Positives = 109/390 (27%), Gaps = 27/390 (6%) Query: 22 AHVVQ------TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI-KTLAHL 74 A TP Y Y Y + + T + +LKAN NQ ++ + Sbjct: 10 AADYGWLADLRTPCYVYEPEVAIARYRSLKA---RLGTKLIVSLKANPNQDMLARCAHAY 66 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY--CFNVESESELKT 132 G+++ S GEL + R + + + + + Sbjct: 67 EDGVELASRGELDAVIGRIRTP-RYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPL 125 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKI-STGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + A + R+N A H + + +L A G+ Sbjct: 126 AREAATGGATPGAVLLRMNAGALAGEHARALWHDHFGMTPNEAHDAVRTLAAAGLPAAGL 185 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + Q + L L + L GG H Sbjct: 186 HVFSGPHSFIRQDAAQPDTLVLPERLAALARDLAPANGAPLSALSLGGGFADDHPGDAAF 245 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 A + E GR + AD G+ T+V+++K D+T + D ++ Sbjct: 246 ERYAAAL----APLAGDYTLAHEAGRAIFADAGVFATRVVAVKPWQDRTIAVCDGGLSHA 301 Query: 312 MRPTLYDAYH-----EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 ++ A + VG C D I + A P+ GD+ Sbjct: 302 FLLAQTESVMRRLAAPSLVRRGAAPPSRAVPTLYVGSTCSRADVIGRDDTGAPPQVGDIA 361 Query: 367 YIEKTGAY--GAVQSGTYNSRLLIPEIMVN 394 + GAY + + S + V Sbjct: 362 VFARCGAYHRTYAMA-HFLSH-EAAHVYVR 389 >gi|294813528|ref|ZP_06772171.1| Putative amino acid decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294326127|gb|EFG07770.1| Putative amino acid decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 455 Score = 93.0 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 66/415 (15%), Positives = 131/415 (31%), Gaps = 40/415 (9%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 LE+L++ PF+ A + N G+D V +A KAN ++ A G Sbjct: 27 LEELSYAFGGPFHVLLPDAFDTNLAALRAVLTEAGVDGQVYFAKKANKAAVWVERCAEGG 86 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G+D+ S GELR AL V E +V +G K+ + + LA++ G + + Sbjct: 87 AGVDVASTGELREALGHGVRGEDLVVTGPVKSTELLRLAVRHGALIAVDALDELDTVVMT 146 Query: 136 RAVSLGKKAPIAF------RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + A + + + + ++ + G + + + Sbjct: 147 ALNGRSRPARVLLRALPTGQPHSRFGLTGDELGLALQRSARAGKALRMEGFSFHLSGYDL 206 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + A ++ + + YH+ Sbjct: 207 TARAELAARLVRLCRQARALGLTADRISIGGGLPISYTDAESWRAFLAAQHSGHYHAGKS 266 Query: 250 PPSSSDYASLI-----------------------HQYFGNLQCKIILEPGRFLVADVGIL 286 + Y + + ++LEPGR L+ G Sbjct: 267 FTEADFYPYHSPVSGAGALRALLAARPDGQQQTLAELLRDSDTALLLEPGRALLDRAGAT 326 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH--IHADIVGPI 344 V + +K+ + +D Y ++++P G A + Sbjct: 327 VFAIQGVKERDGYLLLTVDGTSLSLSEQWFASEYLPDPWLLSPDGGAAPGLHRAAVGAAT 386 Query: 345 CETGDFIALNR--KIALPRPGDLLYIEKTGAYGAVQSGT---YNSRLLIPEIMVN 394 C D ++ + + PR GDLL T Y ++ L P+++V+ Sbjct: 387 CLESDLVSWRKIGFLQRPRAGDLLVYPNTAGYQ--MDSNESSFHDLPLPPKVVVD 439 >gi|254390038|ref|ZP_05005259.1| amino acid decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|326442065|ref|ZP_08216799.1| amino acid decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|197703746|gb|EDY49558.1| amino acid decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 457 Score = 93.0 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 66/415 (15%), Positives = 131/415 (31%), Gaps = 40/415 (9%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 LE+L++ PF+ A + N G+D V +A KAN ++ A G Sbjct: 29 LEELSYAFGGPFHVLLPDAFDTNLAALRAVLTEAGVDGQVYFAKKANKAAVWVERCAEGG 88 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G+D+ S GELR AL V E +V +G K+ + + LA++ G + + Sbjct: 89 AGVDVASTGELREALGHGVRGEDLVVTGPVKSTELLRLAVRHGALIAVDALDELDTVVMT 148 Query: 136 RAVSLGKKAPIAF------RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + A + + + + ++ + G + + + Sbjct: 149 ALNGRSRPARVLLRALPTGQPHSRFGLTGDELGLALQRSARAGKALRMEGFSFHLSGYDL 208 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + A ++ + + YH+ Sbjct: 209 TARAELAARLVRLCRQARALGLTADRISIGGGLPISYTDAESWRAFLAAQHSGHYHAGKS 268 Query: 250 PPSSSDYASLI-----------------------HQYFGNLQCKIILEPGRFLVADVGIL 286 + Y + + ++LEPGR L+ G Sbjct: 269 FTEADFYPYHSPVSGAGALRALLAARPDGQQQTLAELLRDSDTALLLEPGRALLDRAGAT 328 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH--IHADIVGPI 344 V + +K+ + +D Y ++++P G A + Sbjct: 329 VFAIQGVKERDGYLLLTVDGTSLSLSEQWFASEYLPDPWLLSPDGGAAPGLHRAAVGAAT 388 Query: 345 CETGDFIALNR--KIALPRPGDLLYIEKTGAYGAVQSGT---YNSRLLIPEIMVN 394 C D ++ + + PR GDLL T Y ++ L P+++V+ Sbjct: 389 CLESDLVSWRKIGFLQRPRAGDLLVYPNTAGYQ--MDSNESSFHDLPLPPKVVVD 441 >gi|167901191|ref|ZP_02488396.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei NCTC 13177] Length = 398 Score = 93.0 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 127/387 (32%), Gaps = 36/387 (9%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP Y + + +Y A T + +LKANS+ + ++ G+++ S+GE Sbjct: 27 TPCYVFDPQCVLASYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQGE 83 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L + + + S + + + + + + Sbjct: 84 LDTV--VGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + A+ K + FG+ + + A T G +++G+ +GS Sbjct: 142 LRINAGALLGAHAPKSLRDH-----FGMTPAEALGM-ANLLTQAGRRVAGLHAFVGSGNF 195 Query: 206 --------QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +S A+ L + Q + H+++GGG H D Sbjct: 196 RAGPTKGGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYR--- 252 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR---- 313 + ++ E GR + A+ G+ VT+V ++K D+ + D M+ Sbjct: 253 --ARIAPLAKRYTLVHEAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKT 310 Query: 314 ----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-NRKIALPRPGDLLYI 368 T + VG C D I R LP+PGD + Sbjct: 311 EAVLKTWAAPTLVPAGTADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVF 370 Query: 369 EKTGAYGAVQS-GTYNSRLLIPEIMVN 394 + GAY + + S ++ + Sbjct: 371 SQCGAYHHSYTVSGFLSH-KPAQVYIR 396 >gi|297154183|gb|ADI03895.1| lysine/ornithine decarboxylase [Streptomyces bingchenggensis BCW-1] Length = 396 Score = 92.6 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 81/378 (21%), Positives = 145/378 (38%), Gaps = 33/378 (8%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 + T IE+ Y + G V +A+KA V+ LA G+G+D S E+ +AL Sbjct: 14 VFDLTGIEERYESLLRELPG--VAVRFAMKACPVDEVLARLAGAGAGVDAASVPEMEQAL 71 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A VP R+ + K+ I A + GI F +S ++ + + A + Sbjct: 72 RAGVPIGRVHYGNTVKSDRNIADAHRLGIRDFATDSLEDVAAIAEHAPGARVFCRL---- 127 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 +T + + + K+G ++ A L V SG+ +H+GSQ E++ Sbjct: 128 ------STDTRGALWELSGKYGCSTADAVTILETARKLGLV-PSGLSVHVGSQQMTPEAW 180 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGL----GIAYHSDHRPPSSSDYASLIHQYFGN 266 AF+ L D+ L G + HI++GGGL + H P ++I + + Sbjct: 181 RDAFERLADVLAALDRRGIALDHINLGGGLPVPGYLDKHGRPLDPPIDKLFAVIREGMAH 240 Query: 267 ------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 ++EPGR+LVA G + V + + Sbjct: 241 LRTIGGHHLGFVVEPGRYLVAGQGAIRAHVSRLSARQGPDGRRQYWLYLSCGKFNGLYEM 300 Query: 321 ----HEINYIVNPAGDRLHIHADIVGPICETGDFIALN---RKIAL-PRPGDLLYIEKTG 372 + + + + H+ A + GP C++ D + ++ GD +++ G Sbjct: 301 DELQYPLVFPTHGGPGTRHVPAVVAGPTCDSDDAYSHEDGLVQVPEALASGDPVWVLSCG 360 Query: 373 AYGAVQSGT-YNSR-LLI 388 AY + +N L Sbjct: 361 AYAISYTTQGFNGFGPLP 378 >gi|47196205|emb|CAF88057.1| unnamed protein product [Tetraodon nigroviridis] Length = 375 Score = 92.6 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 29/89 (32%) Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + + D F A+ D + + I GP C+ D I + Sbjct: 276 MYYVNDGVYGSFNCILYDHAHCMPTLHKKRKPDEVRYPSSIWGPTCDGLDRIVELCSLPD 335 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + GD L E GAY S T+N Sbjct: 336 LQVGDWLVFENMGAYTVAASSTFNGFQKP 364 >gi|253690265|ref|YP_003019455.1| Orn/DAP/Arg decarboxylase 2 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756843|gb|ACT14919.1| Orn/DAP/Arg decarboxylase 2 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 467 Score = 92.6 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 68/422 (16%), Positives = 119/422 (28%), Gaps = 38/422 (9%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT--MVCYALKANSNQAVIKTLAHL 74 L L +P + N D + Y K N + +++ + Sbjct: 42 RLSWLVEQYGSPLNIVWPHTVANNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNA 101 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G G+D+ S EL+ AL A R+ +G KT + + + E + L Sbjct: 102 GVGVDVSSLQELKDALRAGCDGARLCATGPAKTREFLMALVHHRALIVLDSPEEFDEVLA 161 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 V + A + + + + + + Sbjct: 162 LADVLRVTEPVRVLLRYRPSFAQASRFGMLADEAARCLETLSIRQDAFRLEGFHFHLGGY 221 Query: 195 GVDM-----------------------HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 D I + A + L +Q ++ + Sbjct: 222 EPDTRVAALSEVLPLLEQARAKGLQPAIIDIGGGLPIQYLPASRYQDYLAKQNGADYRHG 281 Query: 232 QH---IDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVT 288 Q GG A S+S + + + + +EPGR L I V Sbjct: 282 QVPTSFYPYGGECSATDYLEAFLSASIGDTRVAEVLKQHGLILAIEPGRSLADQSAITVF 341 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYD----AYHEINYIVNPAGDRLHIHADIVGPI 344 +V ++ D V+ + T ++ + V A I G Sbjct: 342 RVTRTRRQPDGNHVVFVEGSSFSACETWFNSEFLIDPLHVFSVKKDTPPTPGKAWIAGHS 401 Query: 345 CETGDFIALNRKIA---LPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEI-MVNGSQFH 399 C D I NR I +P+PGDLL T Y ++ L + G + Sbjct: 402 CLDDDVIT-NRLIHFRTVPQPGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGE 460 Query: 400 II 401 +I Sbjct: 461 LI 462 >gi|126439778|ref|YP_001057577.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 668] gi|126453032|ref|YP_001064825.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1106a] gi|167844188|ref|ZP_02469696.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei B7210] gi|242316206|ref|ZP_04815222.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 1106b] gi|254196485|ref|ZP_04902909.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei S13] gi|254296043|ref|ZP_04963500.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 406e] gi|126219271|gb|ABN82777.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 668] gi|126226674|gb|ABN90214.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 1106a] gi|157805839|gb|EDO83009.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 406e] gi|169653228|gb|EDS85921.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei S13] gi|242139445|gb|EES25847.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 1106b] Length = 398 Score = 92.6 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 127/387 (32%), Gaps = 36/387 (9%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP Y + + +Y A T + +LKANS+ + ++ G+++ S+GE Sbjct: 27 TPCYVFDPQCVLASYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQGE 83 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L + + + S + + + + + + Sbjct: 84 LDTV--VGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + A+ K + FG+ + + A T G +++G+ +GS Sbjct: 142 LRINAGALLGAHAPKSLRDH-----FGMTPAEALGM-ANLLTQAGRRVAGLHAFVGSGNF 195 Query: 206 --------QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +S A+ L + Q + H+++GGG H D Sbjct: 196 RAGPTKGGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYR--- 252 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR---- 313 + ++ E GR + A+ G+ VT+V ++K D+ + D M+ Sbjct: 253 --ARIAPLAKRYTLVHEAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKT 310 Query: 314 ----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-NRKIALPRPGDLLYI 368 T + VG C D I R LP+PGD + Sbjct: 311 EAVLKTWAAPTLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVF 370 Query: 369 EKTGAYGAVQS-GTYNSRLLIPEIMVN 394 + GAY + + S ++ + Sbjct: 371 SQCGAYHHSYTVSGFLSH-KPAQVYIR 396 >gi|227357986|ref|ZP_03842328.1| decarboxylase [Proteus mirabilis ATCC 29906] gi|227161721|gb|EEI46753.1| decarboxylase [Proteus mirabilis ATCC 29906] Length = 467 Score = 92.6 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 73/417 (17%), Positives = 124/417 (29%), Gaps = 56/417 (13%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLG 75 L L + +P +E+N G+ T + Y +K N +Q++++ G Sbjct: 42 LVHLTQIYGSPLNIVWPHTVEQNVNAMVEVAKTFGIQTNLYYGVKVNKSQSLLQAAVAAG 101 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G D+ S EL A+ A + +G KT + + G E + ++ Sbjct: 102 TGADVSSLYELNDAIRAGCKGTELCATGPAKTTAFLQALIVQGARIVIDSIEEMDELIHL 161 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + I+ + +N +FG+ +I + + VK+ G Sbjct: 162 ATRWISPSGRISILLRFRPESNHIS---------RFGMSSAEIMTALEKLNYSDQVKVDG 212 Query: 196 VDMHIGSQI------------------------------------DQIESFHKAFKLLRD 219 H+ ++S L Sbjct: 213 FHFHLSGYSSVSRIKAFFDTLPLISYARALGYSPYIIDIGGGLPVQYVDSHCYKKWLSTQ 272 Query: 220 LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFL 279 + R+ GG + + + LEPGR L Sbjct: 273 THKDYRTRRIPDSFYPYGGEINAQGWLTEFLTGVDPTGKRVCDALIEEGLTLCLEPGRSL 332 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH----EINYIVNPAGDRLH 335 V I V +V ++ VI + T +++ Y N Sbjct: 333 VNQSAISVFRVCRVRPYDHVGHVIFVEGTSFSACETWFNSEFLSDPLHIYRNNHQPLSSA 392 Query: 336 IHADIVGPICETGDFIALNRKIA---LPRPGDLLYIEKTGAYGAV-QSGTYNSRLLI 388 +A I G C D I NR IA LP+PGDLL T Y ++ L Sbjct: 393 GNAWIAGHSCLDDDVIT-NRLIAFAHLPKPGDLLIFANTAGYQMDLLENQFHRHPLP 448 >gi|217419424|ref|ZP_03450930.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 576] gi|217396728|gb|EEC36744.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 576] Length = 390 Score = 92.6 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 127/387 (32%), Gaps = 36/387 (9%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP Y + + +Y A T + +LKANS+ + ++ G+++ S+GE Sbjct: 19 TPCYVFDPQCVLASYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQGE 75 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L + + + S + + + + + + Sbjct: 76 LDTV--VGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 133 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + A+ K + FG+ + + A T G +++G+ +GS Sbjct: 134 LRINAGALLGAHAPKSLRDH-----FGMTPAEALGM-ANLLTQAGRRVAGLHAFVGSGNF 187 Query: 206 --------QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +S A+ L + Q + H+++GGG H D Sbjct: 188 RAGPTKGGDADSADLAWALAQLAEQIEALVRTPVTHLNLGGGFSEKGHDDATFERYR--- 244 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR---- 313 + ++ E GR + A+ G+ VT+V ++K D+ + D M+ Sbjct: 245 --ARIAPLAKRYTLVHEAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKT 302 Query: 314 ----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-NRKIALPRPGDLLYI 368 T + VG C D I R LP+PGD + Sbjct: 303 EAILKTWAAPTLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVF 362 Query: 369 EKTGAYGAVQS-GTYNSRLLIPEIMVN 394 + GAY + + S ++ + Sbjct: 363 SQCGAYHHSYTVSGFLSH-KPAQVYIR 388 >gi|163755454|ref|ZP_02162574.1| 50S ribosomal protein L19 [Kordia algicida OT-1] gi|161324874|gb|EDP96203.1| 50S ribosomal protein L19 [Kordia algicida OT-1] Length = 490 Score = 92.6 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 55/446 (12%), Positives = 127/446 (28%), Gaps = 47/446 (10%) Query: 7 FEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDT----MVCY 57 L + L K+ P + Y I +N F+NA + + CY Sbjct: 24 KNNKLQFHGIDLSKVIAQYGAPLKFTY-LPKISENINNAKTWFANAMEKHNYAGNYNYCY 82 Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 K++ Q V+ ++ S ++ + + V + D +++ Sbjct: 83 CTKSSHFQHVLHEALKNDIHIETSSAFDIDIVENLKAQGKITDEAFVISNGFKRDQYVKN 142 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-ANTHKKISTGKKEDKFGIPIH 176 N ++ + ++ I N I A+ + + Sbjct: 143 IGRLINNGHKNCIPIIDNYEEISLLSEEIQGNYNIGIRIASEEEPKFEFYTSRLGIGYKN 202 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + P V + + I + I + + L+ ++ +++ Sbjct: 203 IVPFYNRDIKDNPRVTLKMLHFFINTGIRDTAYYWNELLKCMKVYINLKKVCPSLDSLNI 262 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGILVTKV 290 GGG I +I Q I E G F V + G + +V Sbjct: 263 GGGFPIKNSLAFDYDYEYMIDEIIQQIKQTCDEAGVAVPNIFTEFGSFTVGESGGAIYEV 322 Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 + K+ D+ + + P + + + + + G C++ D+ Sbjct: 323 LYQKQQNDREKWNMINSSFITTMPDTWAINKRFIMLPINGWQKEYERVLLGGLTCDSDDY 382 Query: 351 --------------IALNRKIALPRPGDLLYIEKTGAYGAVQSG----TYNSRLLIPEIM 392 + + + + TGAY G + ++ Sbjct: 383 YNSEQHMNAIYLPKFSKEKPL-------YIGFFNTGAYQETIGGFGGLQHCLIPQPKHVL 435 Query: 393 VNGSQ-----FHIIRPRMTFQELIEL 413 ++ + + + T ++L+ L Sbjct: 436 IDRDEEGNIVTTLFSEQQTSEKLLSL 461 >gi|21224367|ref|NP_630146.1| lysine/ornithine decarboxylase [Streptomyces coelicolor A3(2)] gi|3169049|emb|CAA19247.1| putative lysine/ornithine decarboxylase [Streptomyces coelicolor A3(2)] Length = 402 Score = 92.6 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 88/376 (23%), Positives = 143/376 (38%), Gaps = 31/376 (8%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 Y IE+ + T N G V +A+KA V+ LA G+G D S GE+ +AL Sbjct: 26 VYDLAGIERRHDTLRNELPG--VHVRFAMKACPVDEVLAALAGRGAGADAASPGEVEQAL 83 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A VPA R+ + K+ I A + G+ F +S ++ L A +A Sbjct: 84 RAGVPAGRVHYGNTVKSDRNIAEAHRLGVRTFATDSLQDVAALAVHAPGARVFCRVA--- 140 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 T + +KFG P + A V +G+ +H+GSQ E++ Sbjct: 141 -------TGGAGALWGLSNKFGCPPGDAVRVLVAARDAGLV-PAGLSVHVGSQQMTSEAW 192 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI-AYHSDHRPPSSSDY---------ASLI 260 H A L D+ + L +G + H+++GGGL Y H P Sbjct: 193 HGAVDDLGDVLRALGRHGIRVDHVNLGGGLPALGYRDRHGAPLDPPLDKIFAVIREGMDE 252 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVI--SIKKSADKTFVILDVAMNDFMRPTLYD 318 + ++EPGR LVAD G + V+ + +++AD Sbjct: 253 LRRIHGGHLDFVVEPGRHLVADHGAIRAHVVRLTERRAADGERQHWLYLSCGKFNGLYEM 312 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKI----ALPRPGDLLYIEKTGAY 374 + + D + A + GP C++ D + + A GD +++ GAY Sbjct: 313 DALQYRLVFPGHPDGPCVPAVVAGPTCDSDDAYSHEEGLVPVPAALASGDPVWVLSCGAY 372 Query: 375 GAVQSGT-YNSR-LLI 388 + +N L Sbjct: 373 ATSYTTRGFNGFAPLP 388 >gi|1401268|gb|AAB65826.1| ornithine decarboxylase [Nicotiana tabacum] Length = 245 Score = 92.6 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 8/138 (5%) Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + + II EPGRF L T +I + + ++ + M LYD Sbjct: 99 HFDDEPELTIIAEPGRFFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHAT 158 Query: 322 EINYIVNPAGDRLHIHA--------DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 + +R ++ + GP C+ D + + ++ + D L GA Sbjct: 159 VNATPLAVLSNRSNVTCGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGA 218 Query: 374 YGAVQSGTYNSRLLIPEI 391 Y +N + Sbjct: 219 YTKAAGSNFNGFNTSAIV 236 >gi|148698195|gb|EDL30142.1| mCG13535 [Mus musculus] Length = 366 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 99/264 (37%), Gaps = 15/264 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F + + TF A YA+K NSN V+ LA LG+G D S+GEL + Sbjct: 52 FMVADLDVLVSRHRTFLQALPR--VQPFYAVKCNSNPWVLLVLAALGTGFDCASQGELEQ 109 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V RI+F+ K + I A + G+ ++E EL L + I Sbjct: 110 VLGLGVAPSRIIFANPCKAVSHIQFAARCGVQLLTFDNEEELIKLARYHPRARLVLRI-- 167 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T ST KFG + L A L + G H+GS E Sbjct: 168 --------QTLDSQSTFPLHTKFGAHLEACGHLLQVARELGLA-VVGASFHVGSDCHTPE 218 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 S+ +A + + GH++ +D+GGG S+ + + + + Sbjct: 219 SYRQAIADCHRVFEMGCKAGHHMSLLDLGGGFPGVKGSEAKFEEVARVINTALAQYFPEE 278 Query: 267 LQCKIILEPGRFLVADVGILVTKV 290 ++I EPGRF V + Sbjct: 279 TGIEVIAEPGRFYAGSVCTAAVNI 302 >gi|197284143|ref|YP_002150015.1| decarboxylase [Proteus mirabilis HI4320] gi|194681630|emb|CAR40664.1| putative decarboxylase [Proteus mirabilis HI4320] Length = 467 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 77/408 (18%), Positives = 129/408 (31%), Gaps = 38/408 (9%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLG 75 L L + +P +E+N G+ T + Y +K N +Q++++ G Sbjct: 42 LVHLTQIYGSPLNIVWPHTVEQNVNAMVEVAKTFGIQTNLYYGVKVNKSQSLLQAAVAAG 101 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG--IYCFNVESESELKTL 133 +G D+ S EL A+ A + +G KT + + G I ++E EL L Sbjct: 102 TGADVSSLYELNDAIRAGCKGTELCATGPAKTTAFLQALIVQGARIVIDSIEEMDELIHL 161 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKI-----STGKKEDKFGIPIHQIHSLYAYASTL 188 R +S + I R P+ N + + T ++ + + + + Sbjct: 162 ATRWISPSGRISILLRFRPESNHISRFGMLSAEIMTALEKLNYSDQVKVDGFHFHLSGYS 221 Query: 189 PGVKISGVD------------------MHIGSQIDQIESFHKAFKLLR--DLTQQLRSNG 228 +I + IG + +K + R+ Sbjct: 222 SVSRIKAFFDTLPLISYARALGYSPYIIDIGGGLPVQYVDSHCYKKWLSTQTHKDYRTRR 281 Query: 229 HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVT 288 GG + + + LEPGR LV I V Sbjct: 282 IPDSFYPYGGEINAQGWLTEFLTGVDPTGKRVCDALIEEGLTLCLEPGRSLVNQSAISVF 341 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYH----EINYIVNPAGDRLHIHADIVGPI 344 +V ++ VI + T +++ Y N +A I G Sbjct: 342 RVCRVRPYDHVGHVIFVEGTSFSACETWFNSEFLSDPLHIYRNNHQPLSSAGNAWIAGHS 401 Query: 345 CETGDFIALNRKIA---LPRPGDLLYIEKTGAYGAV-QSGTYNSRLLI 388 C D I NR IA LP+PGDLL T Y ++ L Sbjct: 402 CLDDDVIT-NRLIAFAHLPKPGDLLIFANTAGYQMDLLENQFHRHPLP 448 >gi|498170|dbj|BAA06561.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus] Length = 377 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 113/369 (30%), Gaps = 24/369 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + + +N D + ALK S V + G Sbjct: 4 NELKTPYFSINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D D+A FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVRDVADICDKMIFNSQS-----QLAAYRHIVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA I R+NP ++ P Q L A + G+D + Sbjct: 118 KASIGLRLNPGVS----------YAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++ Q + + +GGG+ + + Sbjct: 168 MNCENKDVDAFIGLLDAISAQFGEYLDKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 224 FAEKHGVQMYLEPGERIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 I A + I C GD + G L+I + Y V+ + Sbjct: 284 IL----EASENGEHEYVIGSCSCLAGDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEI 391 N + Sbjct: 340 NGLRMPSVY 348 >gi|213962635|ref|ZP_03390896.1| arginine decarboxylase [Capnocytophaga sputigena Capno] gi|213954630|gb|EEB65951.1| arginine decarboxylase [Capnocytophaga sputigena Capno] Length = 463 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 51/445 (11%), Positives = 113/445 (25%), Gaps = 37/445 (8%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 F L N+ L +L P I +N F A Sbjct: 18 DEFTLDGDELRFHNIDLMELVRKYGAPLKFMYLPRISENIQRAKKWFEKAIKKHKYKGAY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA----ERIVFSGVGKTID 109 CY K++ + V+ ++ S ++ E + K Sbjct: 78 NYCYCTKSSHFKHVMVEALKNDIHMETSSAFDINIINNLISEGLITKENYILCNGFKRDA 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 ID + + + + + T + Sbjct: 138 YIDGIADLINRGYQNCIPIIDNYEEINLFEEKIEGSYNIGIRIASEEDPRSEFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + + P V++ + I + I + + QL+ Sbjct: 198 GYKN---IVPFYNREIKDNPKVRLKMLHFFINTGIKDNAYYWNELLKCLRVYIQLKKVAP 254 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC------KIILEPGRFLVADV 283 + +++GGG I + +I Q I E G F V + Sbjct: 255 ELDSLNIGGGFPIKSSLAFEYDYAYMVDEIIRQIKITCDQEKVPVPNIFTEFGSFTVGEA 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G + +++ K+ D+ + + P + + + + + G Sbjct: 315 GGAIYEIMYQKQQNDREKWNMINSSFITTLPDSWAINKRFVLLPINRWNDEYERVLLGGL 374 Query: 344 ICETGDFI-----ALNRKIALPRPGD--LLYIEKTGAY----GAVQSGTYNSRLLIPEIM 392 C+ D+ + + TGAY G V + ++ Sbjct: 375 TCDGDDYYNSEQNMNAIYLPKYNKNKPLYIGFFNTGAYQDSIGGVGGLQHCLIPQPKIVL 434 Query: 393 VNGSQ-----FHIIRPRMTFQELIE 412 ++ + + + E+++ Sbjct: 435 IDKDKNGNLTSRLFMEQQKADEMLK 459 >gi|17939910|emb|CAD19513.1| DAP decarboxylase [Rhizobium etli] Length = 61 Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 32/61 (52%), Positives = 44/61 (72%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 + F Y +G L+AENV + ++A V TPFY YST +E++Y FS AF +D+MVCYA+KA Sbjct: 1 NHFDYRDGILYAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADVDSMVCYAMKA 60 Query: 62 N 62 N Sbjct: 61 N 61 >gi|194378014|dbj|BAG63370.1| unnamed protein product [Homo sapiens] Length = 308 Score = 92.2 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 83/253 (32%), Gaps = 18/253 (7%) Query: 158 THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 T + + KFG + L A L + + GV H+GS E+F +A Sbjct: 28 TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPETFVQAISDA 86 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEP 275 R + G ++ +D+GGG + + + + + + +II EP Sbjct: 87 RCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEP 146 Query: 276 GRFLVADVGILVTKV---------------ISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 GR+ VA L + + + D F A+ Sbjct: 147 GRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAH 206 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + P D + + I GP C+ D I + GD + E GAY + Sbjct: 207 VKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENKGAYTVAAAS 266 Query: 381 TYNSRLLIPEIMV 393 T+N V Sbjct: 267 TFNGFQRPTIYYV 279 >gi|78060535|ref|YP_367110.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia sp. 383] gi|77965085|gb|ABB06466.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia sp. 383] Length = 391 Score = 92.2 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 67/380 (17%), Positives = 116/380 (30%), Gaps = 23/380 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI-KTLAHLGSGLDIVSEGE 85 TP Y Y Y + + T + +LKAN NQ ++ + G+++ S GE Sbjct: 21 TPCYVYEPEVAIARYRSLKA---RLGTRLIVSLKANPNQDMLARCAHAYEDGVELASRGE 77 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY--CFNVESESELKTLNQRAVSLGKK 143 L + R + + + + + + A Sbjct: 78 LDAVIGRIKTP-RYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAAAGGSTP 136 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA--STLPGVKISGVDMHIG 201 + RVN A + H A A SG I Sbjct: 137 GSVLLRVNAGALAGDDARALWHDHFGMTPNEAHDAVRTLAAASLPVAGLHVFSGPHSFIR 196 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 Q ++ +L +NG + + +GGG + YA Sbjct: 197 QDATQPDTLVLPERLAALARDLAPANGAPLGSLSLGGGFA---DDHPGDAAFERYA--TA 251 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + Q + E GR + AD G+ T+V+++K D+T + D ++ ++ Sbjct: 252 LAPLSGQYSLAHESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVM 311 Query: 322 -----EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY-- 374 PA + VG C D I + A P+ GD+ + GAY Sbjct: 312 RRLAAPSLVRRTPAPPERGVPTIYVGSTCSRADVIGRDDTGAPPQVGDIAVFARCGAYHR 371 Query: 375 GAVQSGTYNSRLLIPEIMVN 394 + + S + V Sbjct: 372 TYSMA-HFLSH-EAAHVYVR 389 >gi|167561446|ref|ZP_02354362.1| pyridoxal-dependent decarboxylase family protein [Burkholderia oklahomensis EO147] Length = 398 Score = 91.8 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 127/387 (32%), Gaps = 36/387 (9%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP Y + + Y A T + +LKANS+ + ++ G+++ S+GE Sbjct: 27 TPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQGE 83 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L + + + S + + + + + + Sbjct: 84 LDTV--VGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + A+ K + FG+ + + A T G +++G+ +GS Sbjct: 142 LRINAGALLGAHAPKSLRDH-----FGMTPAEALGM-ANLLTQAGRRVAGLHAFVGSGNF 195 Query: 206 --------QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +S A+ L + Q + H+++GGG H D Sbjct: 196 RAGPTKGGDADSADLAWALAQLAEQIESLVRAPVTHLNLGGGFSEKGHDDATFERYR--- 252 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR---- 313 + ++ E GR + A+ G+ VT+V ++K D+ + D M+ Sbjct: 253 --ARIAPLAKRYTLVHEAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKT 310 Query: 314 ----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-NRKIALPRPGDLLYI 368 T + + VG C D I R LP+PGD + Sbjct: 311 EAVLKTWEAPTLVPAGPADAHRAPNALPITFVGNTCNRADVIGRLERHPRLPQPGDFVVF 370 Query: 369 EKTGAYGAVQS-GTYNSRLLIPEIMVN 394 + GAY + + S ++ + Sbjct: 371 SQCGAYHHSYTVSGFLSH-KPAQVYIR 396 >gi|237810729|ref|YP_002895180.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei MSHR346] gi|237505916|gb|ACQ98234.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei MSHR346] Length = 398 Score = 91.8 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 126/387 (32%), Gaps = 36/387 (9%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP Y + + Y A T + +LKANS+ + ++ G+++ S+GE Sbjct: 27 TPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQGE 83 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L + + + S + + + + + + Sbjct: 84 LDTV--VGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + A+ K + FG+ + + A T G +++G+ +GS Sbjct: 142 LRINAGALLGAHAPKSLRDH-----FGMTPAEALGM-ANLLTQAGRRVAGLHAFVGSGNF 195 Query: 206 --------QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +S A+ L + Q + H+++GGG H D Sbjct: 196 RAGPTKGGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYR--- 252 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR---- 313 + ++ E GR + A+ G+ VT+V ++K D+ + D M+ Sbjct: 253 --ARIAPLAKRYTLVHEAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKT 310 Query: 314 ----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-NRKIALPRPGDLLYI 368 T + VG C D I R LP+PGD + Sbjct: 311 EAVLKTWEAPTLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVF 370 Query: 369 EKTGAYGAVQS-GTYNSRLLIPEIMVN 394 + GAY + + S ++ + Sbjct: 371 SQCGAYHHSYTVSGFLSH-KPAQVYIR 396 >gi|213421572|ref|ZP_03354638.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 183 Score = 91.8 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 64/175 (36%), Gaps = 16/175 (9%) Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM---- 312 A + + +I +EPGR + +L+T+V K+ + ++ Sbjct: 8 AVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEWKFVDA 67 Query: 313 -----RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI-----ALNRKIA-LPR 361 + + + Y + + GP+C+ GD+ + Sbjct: 68 GYSVLSDSQHFDWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFLLPKETH 127 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDS 415 GD++ GAY YN+R +M++ + +IR +++++++ D Sbjct: 128 VGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVKYDI 182 >gi|196014088|ref|XP_002116904.1| hypothetical protein TRIADDRAFT_60920 [Trichoplax adhaerens] gi|190580622|gb|EDV20704.1| hypothetical protein TRIADDRAFT_60920 [Trichoplax adhaerens] Length = 400 Score = 91.8 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 123/358 (34%), Gaps = 30/358 (8%) Query: 17 SLEKLAHVVQT--------PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 SL +L + T FY + + + + YA+K N++ ++ Sbjct: 14 SLRQLIQKIATNRIDDDDRSFYIANIGDVIYKVQRWMSLLPR--VQPFYAVKCNNDINLL 71 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 TL LG G D S+ E+ + + +++++ K I + + GI ++ S Sbjct: 72 ATLNALGVGFDAASKNEMEAIVKICAHSSKVIYANPCKQISHLKFTERHGIALMTFDNVS 131 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 EL + + I + T +K+G+ I + A L Sbjct: 132 ELHKIKRCYPEAKLLLRIKID-----DFGT-----LYHLSEKYGVDIEDCPNQLQVARDL 181 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 + + G+ HIG E F A +L R +S G+N +D+GGG + Sbjct: 182 -QLNVVGIGFHIGGGRYDGEIFASAIQLARKAFHYGKSIGYNFDILDIGGGFPGYADAKF 240 Query: 249 RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK--------SADKT 300 + +L + Q KI+ EPGR+ LV VI ++ ++ Sbjct: 241 ETICAKIRQALDEYFPIEDQVKIMSEPGRYFAERAFHLVMDVIGKREINAKELTAQGEQK 300 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGD-RLHIHADIVGPICETGDFIALNRKI 357 V + + + + + + G C D++ ++ Sbjct: 301 KYAYYVNESLHGSFGNVLHDFDNQSFLPVSKSLEGLFSSTVWGYSCSGLDYLLKECQL 358 >gi|326336144|ref|ZP_08202316.1| arginine decarboxylase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691653|gb|EGD33620.1| arginine decarboxylase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 463 Score = 91.4 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 53/444 (11%), Positives = 115/444 (25%), Gaps = 37/444 (8%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTM 54 F L N+ L +L P I +N F+ D Sbjct: 19 EFTLEGDELRFHNIDLMELVRQYGAPLKFMYLPKISENIQRAKRWFEKAIKKHKYKGDYN 78 Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA----ERIVFSGVGKTIDE 110 CY K++ + V+ ++ S ++ E + K Sbjct: 79 YCYCTKSSHFKHVMVEALKNDIHMETSSAFDIDIINNLIKEGFLNKENYILCNGFKRDAY 138 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 ID ++ K + + + T + Sbjct: 139 IDGIADLINRGYDRCIPIIDNYEEINLFDQKIKGKYNIGIRIASEEDPRSEFYTSRLGIG 198 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 + + V + + I + I + + QL+ Sbjct: 199 YKN---IVPFYNKELKDNKKVSLKMLHFFINTGIKDNAYYWNELLKCLKVYIQLKKVAPE 255 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC------KIILEPGRFLVADVG 284 + +++GGG I + +I Q I E G F V + G Sbjct: 256 LDSLNIGGGFPIKTSLAFEYDYAYMVDEIIRQIKIACDQEKVPVPNIFTEFGSFTVGEAG 315 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 + +++ K+ D+ + + P + + + + + G Sbjct: 316 GAIYEIMYQKQQNDREKWNMINSSFITTLPDTWAINKRFVLLPINRWNDEYERVFLGGLT 375 Query: 345 CETGDFI-----ALNRKIALPRPGD--LLYIEKTGAY----GAVQSGTYNSRLLIPEIMV 393 C+ D+ + + TGAY G V + +++ Sbjct: 376 CDGDDYYNSEQNMNAIYLPKYNRNKPLYIGFFNTGAYQDSIGGVGGLQHCLIPQPKIVLI 435 Query: 394 NGSQFHIIRPR-----MTFQELIE 412 + ++ I R +E+++ Sbjct: 436 DKNKNGEIISRLFMEQQKAEEMLK 459 >gi|261211745|ref|ZP_05926032.1| carboxynorspermidine decarboxylase putative [Vibrio sp. RC341] gi|260839095|gb|EEX65727.1| carboxynorspermidine decarboxylase putative [Vibrio sp. RC341] Length = 377 Score = 91.4 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 56/389 (14%), Positives = 118/389 (30%), Gaps = 26/389 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP++ + N + + + ALK S V + G Sbjct: 4 NELKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++ FN +S L + Sbjct: 64 PFEVKLGYE-TFGGETHAYSVGYSEDDVKEVIDICDKMIFNSQS-----QLAAYRHLVEG 117 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA + R+NP ++ P Q L A + +D + Sbjct: 118 KASLGLRINPGVS----------YAGQDLANPARQFSRLGVQADHIDEGVFDTIDGVMFH 167 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL ++++ + + +GGG+ + + + Sbjct: 168 MNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVDKLGAALKA 223 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 224 FAERHAVQLYLEPGEAVITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPAS 283 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + A D I C GD + + + G L+I + Y V+ + Sbjct: 284 VL----EACDNGQYEYVIGSCSCLAGDQFCVAKFDEPLQVGRKLHILDSAGYTMVKLNWF 339 Query: 383 NSRLLIPEIMVN-GSQFHIIRPRMTFQEL 410 N + + I +++ Sbjct: 340 NGLKMPSVYCERQNGEIEKINQ-FGYEDF 367 >gi|218659898|ref|ZP_03515828.1| diaminopimelate decarboxylase protein [Rhizobium etli IE4771] Length = 156 Score = 91.4 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 107/155 (69%), Positives = 136/155 (87%) Query: 52 DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 D+MVCYA+KANSNQAV+KTL LG+G+D+VSEGELRRALAA +PA RI+FSGVGKT E+ Sbjct: 2 DSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEM 61 Query: 112 DLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF 171 D AL++GIYCFNVESE EL+ LNQRAVS GKKAP++FR+NPD++A TH KISTGKKE+KF Sbjct: 62 DFALEAGIYCFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKF 121 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 GI + ++YA+A+ LPG++++G+DMHIGSQI + Sbjct: 122 GISWERARAIYAHAAKLPGIEVTGIDMHIGSQITE 156 >gi|121591442|ref|ZP_01678719.1| carboxynorspermidine decarboxylase [Vibrio cholerae 2740-80] gi|121546706|gb|EAX56884.1| carboxynorspermidine decarboxylase [Vibrio cholerae 2740-80] Length = 344 Score = 91.4 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 113/364 (31%), Gaps = 24/364 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L ++TP++ + N + + + ALK S V + G Sbjct: 2 LKDELRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTS 61 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 E++ E +S D ++ FN +S L + Sbjct: 62 SGPFEVKLGYE-TFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQS-----QLAAYRHLV 115 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 KA + R+NP ++ P Q L A + ++ + Sbjct: 116 EGKASLGLRINPGVS----------YAGQDLANPARQFSRLGVQADHIDESVFDSINGVM 165 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + LL ++++ + + +GGG+ + + + Sbjct: 166 FHMNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPG----YDVEKLGAAL 221 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y Sbjct: 222 KAFAERHAVQLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEP 281 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + A D+ I C GD + + + G L+I + Y V+ Sbjct: 282 ASVL----EASDKGQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLN 337 Query: 381 TYNS 384 +N Sbjct: 338 WFNG 341 >gi|53724490|ref|YP_104642.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei ATCC 23344] gi|67643476|ref|ZP_00442222.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei GB8 horse 4] gi|121599096|ref|YP_991480.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei SAVP1] gi|124385611|ref|YP_001027442.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei NCTC 10229] gi|126449890|ref|YP_001082408.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei NCTC 10247] gi|167001221|ref|ZP_02267020.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei PRL-20] gi|254175240|ref|ZP_04881901.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei ATCC 10399] gi|254201732|ref|ZP_04908096.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei FMH] gi|254207065|ref|ZP_04913416.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei JHU] gi|254357546|ref|ZP_04973820.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei 2002721280] gi|52427913|gb|AAU48506.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei ATCC 23344] gi|121227906|gb|ABM50424.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei SAVP1] gi|124293631|gb|ABN02900.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei NCTC 10229] gi|126242760|gb|ABO05853.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei NCTC 10247] gi|147747626|gb|EDK54702.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei FMH] gi|147752607|gb|EDK59673.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei JHU] gi|148026610|gb|EDK84695.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei 2002721280] gi|160696285|gb|EDP86255.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei ATCC 10399] gi|238524832|gb|EEP88263.1| pyridoxal-dependent decarboxylase family protein [Burkholderia mallei GB8 horse 4] gi|243062942|gb|EES45128.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei PRL-20] Length = 398 Score = 91.4 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 126/387 (32%), Gaps = 36/387 (9%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP Y + + Y A T + +LKANS+ + ++ G+++ S+GE Sbjct: 27 TPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQGE 83 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L + + + S + + + + + + Sbjct: 84 LDTV--VGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + A+ K + FG+ + + A T G +++G+ +GS Sbjct: 142 LRINAGALLGAHAPKSLRDH-----FGMTPAEALGM-ANLLTQAGRRVAGLHAFVGSGNF 195 Query: 206 --------QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +S A+ L + Q + H+++GGG H D Sbjct: 196 RAGPTKGGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYR--- 252 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR---- 313 + ++ E GR + A+ G+ VT+V ++K D+ + D M+ Sbjct: 253 --ARIAPLAKRYTLVHEAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKT 310 Query: 314 ----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-NRKIALPRPGDLLYI 368 T + VG C D I R LP+PGD + Sbjct: 311 EAVLKTWAAPTLVPAGTADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVF 370 Query: 369 EKTGAYGAVQS-GTYNSRLLIPEIMVN 394 + GAY + + S ++ + Sbjct: 371 SQCGAYHHSYTVSGFLSH-KPAQVYIR 396 >gi|90414778|ref|ZP_01222747.1| putative carboxynorspermidine decarboxylase [Photobacterium profundum 3TCK] gi|90324144|gb|EAS40726.1| putative carboxynorspermidine decarboxylase [Photobacterium profundum 3TCK] Length = 377 Score = 91.0 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 118/362 (32%), Gaps = 24/362 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP++ + + N + + ALK S V + G E+ Sbjct: 8 TPYFMIDESKLVANLEKAKLLKELSGVKLVLALKCFSTWGVFDLIKPYLDGTTSSGPYEV 67 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S D ++A FN ++ L + KA + Sbjct: 68 KLGYE-TFGGETHAYSVGYSEDDVKEVAEICDKMIFNSQN-----QLAAYRHLVEGKASL 121 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP ++ + ++ + G+ + +D + + Sbjct: 122 GLRLNPGVSYAGQDLANPARQYSRLGV----------QWDHIDAAVFDNLDGVMFHMNCE 171 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + LL D++ + + + + +GGG+ + + A+ + + Sbjct: 172 NKDEDAFIGLLNDISDKFGQHLDKLDWVSLGGGVFFTWPG----YNIEKLAAALKTFSEK 227 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG ++ LV V+ I ++ KT ++ + +Y + Sbjct: 228 HGVQLYLEPGEAIITKTADLVVTVVDIVENEMKTAIVDSATEAHRLDTLIY----DEPAS 283 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + A ++ I C GD + + + G L+I + Y V+ +N Sbjct: 284 IAEASEQGEHQYVIGSCSCLAGDQFCVTQFDQPLKVGQRLHITDSAGYTMVKLNWFNGLK 343 Query: 387 LI 388 + Sbjct: 344 MP 345 >gi|196013974|ref|XP_002116847.1| hypothetical protein TRIADDRAFT_60902 [Trichoplax adhaerens] gi|190580565|gb|EDV20647.1| hypothetical protein TRIADDRAFT_60902 [Trichoplax adhaerens] Length = 393 Score = 91.0 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 73/357 (20%), Positives = 132/357 (36%), Gaps = 30/357 (8%) Query: 28 PFYCYSTTAIEKNYLT-FSNAFDGMDTMVCY-ALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PFY + + Y T F F T + A+K+N + + TL LG+GLD+ S GE Sbjct: 36 PFYLVDISDVINKYKTLFFKVF--FITHIFLTAMKSNPDFQIAATLCGLGTGLDVASAGE 93 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + A+A + E +++S K I + +A + + +SE EL + + S Sbjct: 94 IETAVAVGLKDEDVIYSNTCKGISHLKVAAKENLTQMTFDSEVELHRIKRLYPSARLVLR 153 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + S K K G ++ L A L + + G H+GS+ Sbjct: 154 LLVD----------DSHSELKLGVKAGASFSRVPHLLKVAKELG-LNVIGTSFHVGSECG 202 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 +++ KA + R + + G +D+GGG + S +L + Sbjct: 203 SPDAYAKAIEKSRRVFDIAKGLGMKFNLLDIGGGYPGQINELFTNISRIINKALDIHFPS 262 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE--- 322 + +II EPG++ ILV +IS + + ++ +D + +E Sbjct: 263 DSGVRIISEPGQYFSCSSSILVANIISKRIRFEDDDTQIEGYPSDKENMEITYHINEGVI 322 Query: 323 ------------INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 + + + GP C D I + + G+ +Y Sbjct: 323 GAFISKLIINLLYIPKKLIKSNEKCYRSSMWGPTCTPVDQILSDYNLPEMEVGEWVY 379 >gi|254187839|ref|ZP_04894351.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei Pasteur 52237] gi|157935519|gb|EDO91189.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei Pasteur 52237] Length = 398 Score = 91.0 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 126/387 (32%), Gaps = 36/387 (9%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP Y + + Y A T + +LKANS+ + ++ G+++ S+GE Sbjct: 27 TPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQGE 83 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L + + + S + + + + + + Sbjct: 84 LDTV--VGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + A+ K + FG+ + + A T G +++G+ +GS Sbjct: 142 LRINAGALLGAHAPKSLRDH-----FGMTPAEALGM-ANLLTQAGRRVAGLHAFVGSGNF 195 Query: 206 --------QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +S A+ L + Q + H+++GGG H D Sbjct: 196 RAGPTKGGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYR--- 252 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR---- 313 + ++ E GR + A+ G+ VT+V ++K D+ + D M+ Sbjct: 253 --ARIAPLAKRYTLVHEAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKT 310 Query: 314 ----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-NRKIALPRPGDLLYI 368 T + VG C D I R LP+PGD + Sbjct: 311 EAVLKTWAAPTLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVF 370 Query: 369 EKTGAYGAVQS-GTYNSRLLIPEIMVN 394 + GAY + + S ++ + Sbjct: 371 SQCGAYHHSYTVSGFLSH-KPAQVYIR 396 >gi|134279558|ref|ZP_01766270.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 305] gi|167736984|ref|ZP_02409758.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 14] gi|167822612|ref|ZP_02454083.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 9] gi|226199536|ref|ZP_03795093.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei Pakistan 9] gi|254181907|ref|ZP_04888504.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1655] gi|134248758|gb|EBA48840.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 305] gi|184212445|gb|EDU09488.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1655] gi|225928417|gb|EEH24447.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei Pakistan 9] Length = 398 Score = 91.0 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 126/387 (32%), Gaps = 36/387 (9%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP Y + + Y A T + +LKANS+ + ++ G+++ S+GE Sbjct: 27 TPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQGE 83 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L + + + S + + + + + + Sbjct: 84 LDTV--VGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + A+ K + FG+ + + A T G +++G+ +GS Sbjct: 142 LRINAGALLGAHAPKSLRDH-----FGMTPAEALGM-ANLLTQAGRRVAGLHAFVGSGNF 195 Query: 206 --------QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +S A+ L + Q + H+++GGG H D Sbjct: 196 RAGPTKGGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYR--- 252 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR---- 313 + ++ E GR + A+ G+ VT+V ++K D+ + D M+ Sbjct: 253 --ARIAPLAKRYTLVHEAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKT 310 Query: 314 ----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-NRKIALPRPGDLLYI 368 T + VG C D I R LP+PGD + Sbjct: 311 EAVLKTWAAPTLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVF 370 Query: 369 EKTGAYGAVQS-GTYNSRLLIPEIMVN 394 + GAY + + S ++ + Sbjct: 371 SQCGAYHHSYTVSGFLSH-KPAQVYIR 396 >gi|53718125|ref|YP_107111.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei K96243] gi|167717961|ref|ZP_02401197.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei DM98] gi|167814089|ref|ZP_02445769.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 91] gi|167892695|ref|ZP_02480097.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei 7894] gi|167917439|ref|ZP_02504530.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei BCC215] gi|52208539|emb|CAH34475.1| putative pyridoxal-dependent decarboxylase [Burkholderia pseudomallei K96243] Length = 398 Score = 91.0 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 126/387 (32%), Gaps = 36/387 (9%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP Y + + Y A T + +LKANS+ + ++ G+++ S+GE Sbjct: 27 TPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQGE 83 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L + + + S + + + + + + Sbjct: 84 LDTV--VGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + A+ K + FG+ + + A T G +++G+ +GS Sbjct: 142 LRINAGALLGAHAPKSLRDH-----FGMTPAEALGM-ANLLTQAGRRVAGLHAFVGSGNF 195 Query: 206 --------QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +S A+ L + Q + H+++GGG H D Sbjct: 196 RAGPTKGGDADSADLAWALAQLAEQIEALVRTPVTHLNLGGGFSEKGHDDATFERYR--- 252 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR---- 313 + ++ E GR + A+ G+ VT+V ++K D+ + D M+ Sbjct: 253 --ARIAPLAKRYTLVHEAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKT 310 Query: 314 ----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-NRKIALPRPGDLLYI 368 T + VG C D I R LP+PGD + Sbjct: 311 EAVLKTWAAPTLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVF 370 Query: 369 EKTGAYGAVQS-GTYNSRLLIPEIMVN 394 + GAY + + S ++ + Sbjct: 371 SQCGAYHHSYTVSGFLSH-KPAQVYIR 396 >gi|256820695|ref|YP_003141974.1| Orn/DAP/Arg decarboxylase 2 [Capnocytophaga ochracea DSM 7271] gi|256582278|gb|ACU93413.1| Orn/DAP/Arg decarboxylase 2 [Capnocytophaga ochracea DSM 7271] Length = 463 Score = 91.0 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 52/445 (11%), Positives = 115/445 (25%), Gaps = 37/445 (8%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 F L N+ L +L P I +N F A Sbjct: 18 DEFTLDGDELRFHNIDLMELVRKYGAPLKFMYLPKISENIQRAKRWFEKAIKKHKYKGAY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA----ERIVFSGVGKTID 109 CY K++ + V+ ++ S ++ E + K Sbjct: 78 NYCYCTKSSHFKHVMVEALKNDIHMETSSAFDINIINNLINDGLISKETHILCNGFKRDA 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 ID ++ K + + + + T + Sbjct: 138 YIDGIADLINRGYHNCIPIIDNYEEINLFEEKIKGSYSIGIRIASEEDPRSEFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + + P V++ + I + I + + QL+ Sbjct: 198 GYKN---IVPFYNREIKDNPKVQLKMLHFFINTGIKDNAYYWNELLKCLRVYIQLKKVAP 254 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC------KIILEPGRFLVADV 283 + +++GGG I + +I Q I E G F V + Sbjct: 255 ELDSLNIGGGFPIKSSLAFEFDYAYMVDEIIRQIKITCDQEKVPVPNIFTEFGSFTVGEA 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G + +++ K+ D+ + + P + + + + + G Sbjct: 315 GGAIYEIMYQKQQNDREKWDMINSSFITTLPDSWAINKRFVLLPINRWNDEYERVLLGGL 374 Query: 344 ICETGDFI-----ALNRKIALPRPGD--LLYIEKTGAY----GAVQSGTYNSRLLIPEIM 392 C+ D+ + + TGAY G V + ++ Sbjct: 375 TCDGDDYYNSEQNMNAIYLPKYNKNKPLYIGFFNTGAYQDSIGGVGGLQHCLIPQPKIVL 434 Query: 393 VNGSQ-----FHIIRPRMTFQELIE 412 ++ + + + E+++ Sbjct: 435 IDKDKNGNLTSRLFMEQQKADEMLK 459 >gi|296273951|ref|YP_003656582.1| carboxynorspermidine decarboxylase [Arcobacter nitrofigilis DSM 7299] gi|296098125|gb|ADG94075.1| carboxynorspermidine decarboxylase [Arcobacter nitrofigilis DSM 7299] Length = 378 Score = 91.0 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 56/381 (14%), Positives = 107/381 (28%), Gaps = 22/381 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + +P + ++KN D D + ALK S + G Sbjct: 9 EELPSPCFVCEEELLKKNLELLKKIQDEADVKILLALKGFSLYSTFDLCKEYLKGCCASG 68 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E A E +S K + ++ S FN + L + Sbjct: 69 LHEALLASKEFGR-EVHTYSPAFKEEEVDEIVSLSNHIVFNS-----ISQLKKFENKAIG 122 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + I RVNP+ ++ + + GI + G+ H Sbjct: 123 QTSIGLRVNPEYSSVEVDLYNPCGAFSRLGIT-------RKNFDKDAIFNVDGLHFHALC 175 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + L+ ++ ++ ++ GGG I + Sbjct: 176 EQ----NVDALEGALKSFEEKFGEFLPKMKWVNFGGGHHITRADYDVNGLVTLL---KEF 228 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++ LEPG + G L V+ I + + + + P + Sbjct: 229 KIRYPHLEVYLEPGEAVGWKTGYLSATVLDIVNNG--MDIAILDTSAEAHMPDTLAMPYR 286 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + + + G C GD I + GD + +E Y V++ T+ Sbjct: 287 ADIRNSAESGVKAHTYRLGGNTCLAGDIIGDYSFDKPLKVGDKIILEDMIHYTMVKTTTF 346 Query: 383 NSRLLIPEIMVNGSQFHIIRP 403 N L + + I Sbjct: 347 NGIKLPSIAIKKADDCYQIVK 367 >gi|76810875|ref|YP_332123.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1710b] gi|254258627|ref|ZP_04949681.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1710a] gi|76580328|gb|ABA49803.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1710b] gi|254217316|gb|EET06700.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 1710a] Length = 398 Score = 91.0 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 126/387 (32%), Gaps = 36/387 (9%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP Y + + Y A T + +LKANS+ + ++ G+++ S+GE Sbjct: 27 TPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQGE 83 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L + + + S + + + + + + Sbjct: 84 LDTV--VGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + + A+ K + FG+ + + A T G +++G+ +GS Sbjct: 142 LRINAGALLGAHAPKSLRDH-----FGMTPAEALGM-ANLLTQAGRRVAGLHAFVGSGNF 195 Query: 206 --------QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 +S A+ L + Q + H+++GGG H D Sbjct: 196 RAGPTKGGDADSADLAWALAQLAEQIEALVRTPVTHLNLGGGFSEKGHDDATFERYR--- 252 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR---- 313 + ++ E GR + A+ G+ VT+V ++K D+ + D M+ Sbjct: 253 --ARIAPLAKRYTLVHEAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKT 310 Query: 314 ----PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL-NRKIALPRPGDLLYI 368 T + VG C D I R LP+PGD + Sbjct: 311 EAVLKTWAAPTLVPAGAADAHRAPNVRPITFVGNTCNRADVIGRLERHPRLPQPGDFVVF 370 Query: 369 EKTGAYGAVQS-GTYNSRLLIPEIMVN 394 + GAY + + S ++ + Sbjct: 371 SQCGAYHHSYTVSGFLSH-KPAQVYIR 396 >gi|197295061|ref|YP_002153602.1| putative pyridoxal-dependent decarboxylase [Burkholderia cenocepacia J2315] gi|195944540|emb|CAR57143.1| putative pyridoxal-dependent decarboxylase [Burkholderia cenocepacia J2315] Length = 391 Score = 91.0 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 62/379 (16%), Positives = 120/379 (31%), Gaps = 21/379 (5%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI-KTLAHLGSGLDIVSEGE 85 TP Y Y Y + + T + +LKAN NQ ++ + G+++ S GE Sbjct: 21 TPCYVYEPEVAIARYRSLKA---RLGTRLIVSLKANPNQDMLARCAHAYEDGVELASRGE 77 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY--CFNVESESELKTLNQRAVSLGKK 143 L + + R + + + + + + A Sbjct: 78 LDAVIG-RIKTARYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAAAGGSTP 136 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + RVN A H + FG+ ++ H + ++G+ + G Sbjct: 137 GAVLLRVNAGALAGVHARAQWHDH---FGMTPNEAHDAVRTLAAAGLP-VAGLHVFSGPH 192 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY-ASLIHQ 262 + + L+ + + G L + P + + Sbjct: 193 SFIRQDPTQPDTLVLPERLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFERYAAAL 252 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH- 321 + + E GR + AD G+ T+V+++K D+T + D ++ ++ Sbjct: 253 APLAGRYSLAHESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMR 312 Query: 322 ----EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY--G 375 PA + VG C D I + A P+ GD+ E+ GAY Sbjct: 313 RLAAPSLVRRMPAPPSRGVPTLYVGSTCSRADVIGRDDAGAPPQVGDIAVFERCGAYHRT 372 Query: 376 AVQSGTYNSRLLIPEIMVN 394 + + S + V Sbjct: 373 YSMA-HFLSH-EAAHVYVR 389 >gi|213586305|ref|ZP_03368131.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 95 Score = 90.7 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 7/83 (8%) Query: 340 IVGPICETGDFI-----ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + GP+C+ GD+ + GD++ GAY YN+R +M+ Sbjct: 12 LAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMI 71 Query: 394 N-GSQFHIIRPRMTFQELIELDS 415 + + +IR +++++++ D Sbjct: 72 DKNGETRLIRREDSYEDMVKYDI 94 >gi|114764907|ref|ZP_01444080.1| Putative Ornithine decarboxylase [Pelagibaca bermudensis HTCC2601] gi|114542619|gb|EAU45643.1| Putative Ornithine decarboxylase [Roseovarius sp. HTCC2601] Length = 375 Score = 90.7 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 60/367 (16%), Positives = 114/367 (31%), Gaps = 23/367 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGEL 86 P + + + F + F G+ V YA+KAN +I+ L G D+ S E+ Sbjct: 23 PVFFFCPQRLGDVAGRFLDGFPGV---VSYAVKANPLPEMIEGLWRAGLRVFDVASPAEM 79 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A P + + ++ E+ L ++V+ SEL+ L L I Sbjct: 80 ALVR-AQCPEAVLHYHNPVRSQAEVSAGLAHRCVSWSVDRMSELEKLAA----LPAGTEI 134 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A R+ + + + E + + + + + Sbjct: 135 AVRLKLPVAGAAYDFGAKFGAEPAGAVTLLRRVAEMG----------LTPSLTFHPGTQC 184 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF-G 265 + A + R G + ++VGGG + Sbjct: 185 RGAEPWARYIHAAAGVA-RDAGVTLHRLNVGGGFPSDRGEGEPDLETIFATIGRATREAF 243 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++ EPGR L A+ +L KV +++ A + +M ++ R + Sbjct: 244 PRPPDLVCEPGRGLCAEAFLLALKVKAVEAEALFVNDGIYGSMAEW-RDLGMAGRVRVVD 302 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNS 384 + GP C++ D + + GD + E GAY +N Sbjct: 303 PAGRRRGGRAQPRIVFGPTCDSLDRLPEPMALPAAIEEGDFVICEGMGAYSRALVTGFNG 362 Query: 385 RLLIPEI 391 + Sbjct: 363 YGARRVV 369 >gi|16520033|ref|NP_444153.1| conserved uncharacterized 49.9 kDa enzyme; second copy encoded by pNGR234b [Sinorhizobium fredii NGR234] gi|2496780|sp|P55709|Y4YA_RHISN RecName: Full=Uncharacterized protein y4yA gi|2182725|gb|AAB91940.1| conserved uncharacterized 49.9 kDa enzyme; second copy encoded by pNGR234b [Sinorhizobium fredii NGR234] Length = 457 Score = 90.7 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 85/420 (20%), Positives = 140/420 (33%), Gaps = 63/420 (15%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 L A +P A+ +N ++ + Y KAN + +++ G Sbjct: 31 LFDWAARHGSPLNLVWPDALRENLAALKGVLTERRLEHAIYYGAKANKSPGLMQAALSAG 90 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD+ S ELR A R+V +G KT + +V+S EL+ L Sbjct: 91 AGLDVSSLYELRDARRLGADGARLVATGPAKTSAFHQELINCN-ALISVDSPEELEDLIH 149 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + I R+ P + + +FG+P + A + V+ G Sbjct: 150 GLPADAGQQSILLRLRP-----------RDQSKSRFGMPPDAVVHCLARLAGEGRVRFDG 198 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-- 253 + H+ + A + DL + R G ID+GGGL I Y R + Sbjct: 199 LHFHLSGYRRET--RVAALREAADLIAEARRMGFFPGMIDIGGGLPIQYVDRARYKAHLA 256 Query: 254 ----------------SDYASLIHQYFGNLQ--------------------CKIILEPGR 277 Y S + + + +EPGR Sbjct: 257 AQAPEDYRTGKIPDSFYPYGSTLSAADWLHRLLEAEMNQGRSVAGYLAREGLTLAMEPGR 316 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR---- 333 L I V ++ +K + VI + T + + I+ I+ PA Sbjct: 317 ALADQAAITVFRISRVKALGPDSHVIFVEGSSFSACETWFASEFLIDPILVPATKATVQL 376 Query: 334 LHIHADIVGPICETGDFIALNRKI---ALPRPGDLLYIEKTGAYGAV-QSGTYNSRLLIP 389 + A + G C D I+ NR + PR GDLL TG Y ++ + Sbjct: 377 PPVRAYLAGHSCLDEDVIS-NRWLTFPTAPRAGDLLVYANTGGYQMDLLENEFHRHPMPA 435 >gi|300781330|ref|ZP_07091184.1| diaminopimelate decarboxylase [Corynebacterium genitalium ATCC 33030] gi|300533037|gb|EFK54098.1| diaminopimelate decarboxylase [Corynebacterium genitalium ATCC 33030] Length = 909 Score = 90.7 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 71/388 (18%), Positives = 124/388 (31%), Gaps = 31/388 (7%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHL 74 L +P + + N +A G++ + +A KAN + T+ Sbjct: 492 DCRNLLEEFSSPVNVLNPEPMLANVDELVSAGASTGVEVKIFFARKANKGLVFVDTMRDA 551 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G G+D+ SE ELR+ L VP ERI+ S K+ ++LA+ +G + ++ +EL+ + Sbjct: 552 GHGVDVASENELRQVLDRGVPGERIILSAAIKSDALLELAIANG-VVISADNVTELERII 610 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP--------IHQIHSLYAYAS 186 A +P T + + P +H YA A Sbjct: 611 AIAGDRTALVAPRLAPDPTTMPPTRFGERSEVWAQRLSEPAGSVTVAGVHVHLHGYAAAD 670 Query: 187 TL-----------------PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + V + E + ++ + Sbjct: 671 RSAALRECVGLVDKLRASGHDPQFIDVGGGVPMSYLDDEEQWNHAQDSLRAMREGYAEPF 730 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 + + A + Q ++ LEPGR L+ G+++ Sbjct: 731 TWKGDPLHNTYPYWQRPVRGAWLRDVLADGVAQELTKRGLRLHLEPGRSLLDGCGLILAT 790 Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDA-YHEINYIVNPAGDRLHIHADIVGPICETG 348 V K +D ++ R T D I P + A +VG C Sbjct: 791 VEFTKHRSDGLPLVGLAMNRTQCRTTSDDYLVDPILVTDAPGSTDEEVEAFLVGAYCIED 850 Query: 349 DFIALNR-KIAL-PRPGDLLYIEKTGAY 374 + I R + RPGD++ I T Y Sbjct: 851 EVILRRRIRFPRGVRPGDIVAIPNTAGY 878 >gi|317506808|ref|ZP_07964582.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC BAA-974] gi|316254882|gb|EFV14178.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC BAA-974] Length = 394 Score = 90.3 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 61/376 (16%), Positives = 96/376 (25%), Gaps = 40/376 (10%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQA 66 +G L LA T + + + A + Y+ +A A Sbjct: 31 EDGRPAVGGCGLTDLADQFGTACDVIDEAEVRAHAKAYRAALP--HGEIAYSGRALLTPA 88 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 + LA G LD+ S EL AL PA RI+ G KT +E+ AL + + +V++ Sbjct: 89 IAGWLADEGLSLDVGSPDELGAALRGGFPASRIIAGGAVKTREELAAALAARVGRISVDT 148 Query: 127 ESE-LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ-IHSLYAY 184 E ++ + + E FG P+ + Sbjct: 149 FDELAWLASRVDRPQQILLRVGLS---------------DELEQAFGFPLSGLAEEAWLR 193 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 AS +++ G+ H+ S L R V A Sbjct: 194 ASRQKHLRVVGLHCHVSSGTHDQAQGALLEFLDRMRAAHGFVAEQINLGGGVSVETARAL 253 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 P Q ++ V G V +A Sbjct: 254 AEAAVPRPLPRLVVEPGQGVVGQAGVRLVRVIAKSVGAHGEPCAHVDGPLPTAGALPRSC 313 Query: 305 DVAMNDFMRPTLYD-----AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA- 358 A D R + A + + Sbjct: 314 PGADLDECRLVNRHSLAADVPTRLLSRPRSEHHCPAETAVVA---------------LPA 358 Query: 359 LPRPGDLLYIEKTGAY 374 R GDL+ GAY Sbjct: 359 DARAGDLIAFPGVGAY 374 >gi|15858867|gb|AAL08051.1| ornithine decarboxylase-like protein variant 4 [Homo sapiens] Length = 374 Score = 90.3 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 104/268 (38%), Gaps = 7/268 (2%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV--SLGKKAPI 146 +PA +I+ + K I +I A + GI + ++E EL + + ++ Sbjct: 99 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKFVQQRGT 158 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 A + + T S KFG+ + L A V++ GV HIGS Sbjct: 159 ACLIRMVLCIATDDSHSLSCLSLKFGVSLKSCRHLLENAKKH-HVEVVGVSFHIGSGCPD 217 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYF 264 +++ ++ R + + GH + +D+GGG + R + + + Sbjct: 218 PQAYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFP 277 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVIS 292 I E GR+ V + +I+ Sbjct: 278 EGCGVDIFAELGRYYVTSAFTVAVSIIA 305 >gi|87122118|ref|ZP_01078002.1| Orn/DAP/Arg decarboxylase 2 [Marinomonas sp. MED121] gi|86162665|gb|EAQ63946.1| Orn/DAP/Arg decarboxylase 2 [Marinomonas sp. MED121] Length = 410 Score = 89.9 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 72/411 (17%), Positives = 126/411 (30%), Gaps = 54/411 (13%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 ++TP Y YS + + NY ++A T + Y++KAN+N ++ +H G+++ S Sbjct: 14 QIETPCYLYSVSQVAANYQALTSAL---GTKLIYSMKANNNADLLMRASHYLDGGIEVAS 70 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GEL L A +E+ + + + A+ S K Sbjct: 71 IGEL--NLVAGGDSEKFI-NNPSADKKFLRAAVASRSTIIVDNLIQLDALEEFIGKRPLK 127 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + G + D+FG+ + A +L ++G + GS Sbjct: 128 PILLRLNSSV---LKRFNEHHPGVRADQFGMDWDTVEKAIARCKSLQIP-LAGFHLFNGS 183 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + A + L + R G + +++GGG + A Sbjct: 184 YSFAKVATATAIAGIAILQEVERLYGSPLSFVNLGGGFSDHWQDQPFDFE----AYRALL 239 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + E GR L+A G T+V K+ F I D +N + Sbjct: 240 KEFPSHITLAHETGRGLMASAGYFATRVRYTKQIEKDFFAICDGGINQNFLLAQTENAFR 299 Query: 323 I------------------------NYIVNPAGDRLHIH-------------ADIVGPIC 345 N + D+ H VG C Sbjct: 300 RLKQPLLWRKSEMRVAAESGQDASSNQGADTEQDKAHQTAGPEATNVSDKGACTYVGSSC 359 Query: 346 ETGDFIALNRKI-ALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMVN 394 D I P GD+ GAY A + T + ++ Sbjct: 360 SKDDVIGKQNDDQPRPEAGDICVFADCGAYNASYTMTPFLKLPQAKTYIIE 410 >gi|54309400|ref|YP_130420.1| putative carboxynorspermidine decarboxylase [Photobacterium profundum SS9] gi|46913836|emb|CAG20618.1| putative carboxynorspermidine decarboxylase [Photobacterium profundum SS9] Length = 377 Score = 89.9 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 119/362 (32%), Gaps = 24/362 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP++ + + N + + ALK S V + G E+ Sbjct: 8 TPYFMIDESKLVANLEKAKLLKELSGVKLVLALKCFSTWGVFDLIKPYLDGTTSSGPYEV 67 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S D D+A FN ++ L + KA + Sbjct: 68 KLGYE-TFGGETHAYSVGYSEDDVKDVAEICDKMIFNSQN-----QLAAYRHLVEGKASL 121 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP ++ + ++ + G+ + +D + + Sbjct: 122 GLRLNPGVSYAGQDLANPARQYSRLGV----------QWDHIDTAVFDNLDGVMFHMNCE 171 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + +LL D++ + + + + +GGG+ + + A+ + + Sbjct: 172 NKDEDAFIRLLNDISDKFGKHLDKLDWVSLGGGVFFTWPG----YNIEKLAAALKTFSEK 227 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 ++ LEPG ++ LV V+ I ++ KT ++ + +Y + Sbjct: 228 HGVQLYLEPGEAIITKTADLVVTVVDIVENEIKTAIVDSATEAHRLDTLIY----DEPAS 283 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + A ++ I C GD + + + G L+I + Y V+ +N Sbjct: 284 IAEASEQGAHQYVIGSCSCLAGDQFCVTQFDEPLKIGQRLHITDSAGYTMVKLNWFNGLK 343 Query: 387 LI 388 + Sbjct: 344 MP 345 >gi|228472806|ref|ZP_04057564.1| arginine 2-monooxygenase [Capnocytophaga gingivalis ATCC 33624] gi|228275857|gb|EEK14623.1| arginine 2-monooxygenase [Capnocytophaga gingivalis ATCC 33624] Length = 463 Score = 89.9 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 50/445 (11%), Positives = 114/445 (25%), Gaps = 37/445 (8%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 F L ++ L +L P I +N F A Sbjct: 18 DEFTLEGDELRFHDIDLMELVREYGAPLKFMYLPKISENIQRAKKWFEKAIKKHKYKGAY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA----ERIVFSGVGKTID 109 CY K++ + V+ ++ S ++ E + K Sbjct: 78 NYCYCTKSSHFKHVMVEALKNDIQMETSSAFDINIINNLISEGLITKENYILCNGFKRDA 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 ID ++ K + + + T + Sbjct: 138 YIDGIADLINRGYDKCMPIIDNYEEINLFDEKIKENYNIGIRIASEEDPRSEFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + + V + + I + I + + QL+ Sbjct: 198 GYKN---IVPFYNKEIKDNKKVTLKMLHFFINTGIKDNAYYWNELLKCLKVYIQLKKVAP 254 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC------KIILEPGRFLVADV 283 + +++GGG I + +I Q I E G F V + Sbjct: 255 ELDSLNIGGGFPIKTSLAFEYDYAYMVDEIIRQIKIACDQEKVPVPNIFTEFGSFTVGEA 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G + +++ K+ D+ + + P + + + + + G Sbjct: 315 GGAIYEIMYQKQQNDREKWNMINSSFITTLPDTWAINKRFVLLPINRWNDEYERVLLGGL 374 Query: 344 ICETGDFI-----ALNRKIALPRPGD--LLYIEKTGAY----GAVQSGTYNSRLLIPEIM 392 C+ D+ + + TGAY G V + ++ Sbjct: 375 TCDGDDYYNSEQNMNAIYLPKYNKNKPLYIGFFNTGAYQDSIGGVGGLQHCLIPQPKIVL 434 Query: 393 VNGSQ-----FHIIRPRMTFQELIE 412 ++ ++ + + +E+++ Sbjct: 435 IDRNKDGALTTRLFMEQQKAEEMLK 459 >gi|170049415|ref|XP_001855922.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167871261|gb|EDS34644.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 304 Score = 89.5 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 73/274 (26%), Gaps = 22/274 (8%) Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 P+ D+ A + D F I V Sbjct: 31 PVHILDLDDVVAKHQNWRRKLPRVDPFYAV------KCRILHMHAFPSIPCVSRQREWAS 84 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + K + + R +S ++ + Sbjct: 85 PRRRLSKDVRKDQLRHNHRNHGCFCTWSVTPCRRLQRVVRKDQQRDLASPRSSTTRQIFP 144 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT------FVILDVAMNDFMRPTLYD 318 ++I EPG + VA L+ V S + L+ + Sbjct: 145 LKSNVRVIAEPGTYYVASAVTLIANVQSKRIVRTPQGTVRELMYYLNDGLFGSFDWLNPR 204 Query: 319 AYHEINYIVNPA--GDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGA 376 Y N R + GP C++ D I + + GD L + GAYG Sbjct: 205 KYPPQVIPGNRQLVRSRELFSTTLWGPTCDSTDLILSGMAMEELQIGDFLVFDDMGAYGT 264 Query: 377 VQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 V + ++N +MV I R ++++L Sbjct: 265 VLATSFNGFAKPK-VMVY------ISRR-SWEQL 290 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%), Gaps = 2/34 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 P + + + + +D YA+K Sbjct: 31 PVHILDLDDVVAKHQNWRRKLPRVDP--FYAVKC 62 >gi|218709932|ref|YP_002417553.1| carboxynorspermidine decarboxylase [Vibrio splendidus LGP32] gi|218322951|emb|CAV19128.1| carboxynorspermidine decarboxylase [Vibrio splendidus LGP32] Length = 383 Score = 89.5 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 109/366 (29%), Gaps = 24/366 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP++ + + N + + ALK S V + G Sbjct: 10 EELKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSG 69 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E++ E +S D ++A FN +S L + Sbjct: 70 PYEVKLGHE-TFGGETHAYSVGYSEDDVREVADICDKMIFNSQS-----QLAAYRHIVEG 123 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 KA + R+NP ++ P Q L A + ++ + Sbjct: 124 KASLGLRLNPGVS----------YAGQDLANPARQFSRLGVQADHIKPELFDEINGVMFH 173 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + LL +++Q + + + +GGG+ + + Sbjct: 174 MNCENKDVDAFIGLLDSISEQFGEHLDKLDWVSMGGGVFFTWPG----YDIEKLGLALKA 229 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG ++ LV V+ I ++ KT ++ + +Y+ Sbjct: 230 FSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPAS 289 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTY 382 + I C GD G L++ + Y V+ + Sbjct: 290 VLEASENGS----HDYVIGSCSCLAGDQFCEVSFDEPLNIGQKLHLLDSAGYTMVKLNWF 345 Query: 383 NSRLLI 388 N + Sbjct: 346 NGLKMP 351 >gi|154246672|ref|YP_001417630.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2] gi|154160757|gb|ABS67973.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2] Length = 432 Score = 89.5 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 103/370 (27%), Gaps = 19/370 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGEL 86 P YC+ + + F AF G YA+K N V+ LA G D+ S E Sbjct: 38 PVYCFRPHVLAADARAFVEAFPG---KTAYAVKTNGEPMVLDVLAKAGISAFDVASPAEF 94 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A AA AE + V D I ++ E E+ + + +L Sbjct: 95 AAARAAAPGAELLYMHPVKAQSDIRLALEHYRIRSTALDHEDEVAKIVRIVRALDLDPED 154 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + + KFG L + + + Sbjct: 155 LTLFVRIASKG----DAAYELSKKFGAAPGHAAELLQRIHGIGIKCGLCFHVGSQVEDPD 210 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA---SLIHQY 263 + A + ++ P + + Sbjct: 211 TYARAVAVAAEVRAAAGVPIVALDVGGGFPATYARNPRRPVPPMPPLDEIISGLMGAVER 270 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKV--ISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 G ++ EPGR +VA ++ +V ++ + ++ + + L + Sbjct: 271 NGFAGTPLVAEPGRVIVARAFSVIVRVLLKKGQRLYINDGIWSSLSDSWTGKILLPVRHI 330 Query: 322 EINYIVNP-----AGDRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTGAYG 375 +G I G C++ D ++ + GD + I GAY Sbjct: 331 PDPARRRRPGRGASGSGRIEPFRIYGATCDSVDVLSRPFFLPESVDTGDWIEIGHIGAYS 390 Query: 376 AVQSGTYNSR 385 +N Sbjct: 391 LSLRTRFNGF 400 >gi|15858869|gb|AAL08052.1| ornithine decarboxylase-like protein variant 3 [Homo sapiens] gi|119627874|gb|EAX07469.1| arginine decarboxylase, isoform CRA_a [Homo sapiens] Length = 362 Score = 89.1 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 102/266 (38%), Gaps = 15/266 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 +PA +I+ + K I +I A + GI + ++E EL + + S IA Sbjct: 99 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S KFG+ + L A V++ GV HIGS + Sbjct: 158 ---------TDDSHSLSCLSLKFGVSLKSCRHLLENAKKH-HVEVVGVSFHIGSGCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 208 AYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVIS 292 I E GR+ V + +I+ Sbjct: 268 CGVDIFAELGRYYVTSAFTVAVSIIA 293 >gi|315223822|ref|ZP_07865670.1| arginine decarboxylase [Capnocytophaga ochracea F0287] gi|314946152|gb|EFS98153.1| arginine decarboxylase [Capnocytophaga ochracea F0287] Length = 463 Score = 89.1 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 51/425 (12%), Positives = 109/425 (25%), Gaps = 32/425 (7%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 F L N+ L +L P I +N F A Sbjct: 18 DEFTLDGDELRFHNIDLMELVRKYGAPLKFMYLPRISENIQRAKRWFEKAIKKHKYKGAY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA----ERIVFSGVGKTID 109 CY K++ + V+ ++ S ++ E + K Sbjct: 78 NYCYCTKSSHFKHVMVEALKNDIHMETSSAFDINIINNLINDGLISKETHILCNGFKRDA 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 ID ++ K + + + + T + Sbjct: 138 YIDGIADLINRGYHNCIPIIDNYEEINLFEEKIKGSYSIGIRIASEEDPRSEFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + + P V++ + I + I + + QL+ Sbjct: 198 GYKN---IVPFYNREIKDNPKVQLKMLHFFINTGIKDNAYYWNELLKCLRVYIQLKKVAP 254 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQC------KIILEPGRFLVADV 283 + +++GGG I + +I Q I E G F V + Sbjct: 255 ELDSLNIGGGFPIKSSLAFEFDYAYMVDEIIRQIKITCDQEKVPVPNIFTEFGSFTVGEA 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G + +++ K+ D+ + + P + + + + + G Sbjct: 315 GGAIYEIMYQKQQNDREKWDMINSSFITTLPDSWAINKRFVLLPINRWNDEYERVLLGGL 374 Query: 344 ICETGDFI-----ALNRKIALPRPGD--LLYIEKTGAY----GAVQSGTYNSRLLIPEIM 392 C+ D+ + + TGAY G V + ++ Sbjct: 375 TCDGDDYYNSEQNMNAIYLPKYNKNKPLYIGFFNTGAYQDSIGGVGGLQHCLIPQPKIVL 434 Query: 393 VNGSQ 397 ++ + Sbjct: 435 IDKDK 439 >gi|332830979|ref|XP_003311935.1| PREDICTED: antizyme inhibitor 1 [Pan troglodytes] gi|193787865|dbj|BAG53068.1| unnamed protein product [Homo sapiens] Length = 363 Score = 89.1 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 66/333 (19%), Positives = 108/333 (32%), Gaps = 28/333 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L V+I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELD-VQIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQY 263 + A R + G + +D+GGG + P Y Sbjct: 207 VYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGV 266 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMR 313 + F +A I V + K + + + D F Sbjct: 267 KIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFAS 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 D D + + GP C+ Sbjct: 327 KLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCD 359 >gi|23012520|ref|ZP_00052584.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 274 Score = 89.1 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 96/262 (36%), Gaps = 12/262 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + +NY F+ A DT V YA+KAN V++ LA +GS D S E+ Sbjct: 21 PVMVLDLDVVRENYTAFARALP--DTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK---TLNQRAVSLGKKA 144 AL+A A+R+ F K +I AL+ GI F V+ ++E++ ++ A Sbjct: 79 MALSAGATADRVSFGNTIKKERDIVRALKLGIRLFAVDCQAEVEKISRASEAAGIEAGDV 138 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + R+ D A KFG ++ +A + GV H+GSQ Sbjct: 139 QVFCRILCD-GAGA-----DWPLSRKFGCEPEMAVNVLEHAHRHG-LHAYGVSFHVGSQQ 191 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 E++ A + Q G + +++GGG Y + A Sbjct: 192 ANTEAWDGALASAAAIFQDCALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTK 251 Query: 265 GNLQCKIILEPGRFLVADVGIL 286 A + Sbjct: 252 HFGNRIPETNHRAGAAAWSAMR 273 >gi|29832159|ref|NP_826793.1| amino acid decarboxylase [Streptomyces avermitilis MA-4680] gi|29609277|dbj|BAC73328.1| putative amino acid decarboxylase [Streptomyces avermitilis MA-4680] Length = 457 Score = 89.1 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 78/431 (18%), Positives = 141/431 (32%), Gaps = 46/431 (10%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLG 75 LE+LA+ + PF+ A + N + D G+D V +A KAN + A G Sbjct: 29 LEELAYALGGPFHFLLPDAFDANLRALHSVLDETGVDGFVYFAKKANKAAVWAERSAAGG 88 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +G+D+ S ELR+AL V E +V +G K + + LA++ G + + Sbjct: 89 AGVDVASAAELRQALGHGVRGEHLVVTGPAKDLALLGLAVRHGALIAVDALDELDTLITT 148 Query: 136 RAVSLGKKAPIAFRVNPDINANTH----------------------KKISTGKKEDKFGI 173 + + A + R P ++ + + + Sbjct: 149 VSGDRTRPARLLLRCLPPAQPHSRFGLGEAEVALALERCVTAGEAVRMEGFSFHLSGYDV 208 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 + + + L + I S+ A LT+Q + H + Sbjct: 209 KLRADLAGHLVELCLKARVLGLEADRISIGGGLPVSYSSAADWNTFLTRQNGGHYHADRT 268 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLIHQYF-------GNLQCKIILEPGRFLVADVGIL 286 D G A+ + + ++LEPGR L+ G Sbjct: 269 FDPDGFYPYHSPVAGADALRRILATRPEGHRPSLAALLNDAGITLLLEPGRALLDRAGGT 328 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI--HADIVGPI 344 V +V +K + ++ Y ++++ D A + Sbjct: 329 VFRVQGVKDRDGYQLLTVNGTSLSLSEQWFNSEYLPDPHLLSAHPDTPDAVWPAAVGAAT 388 Query: 345 CETGDFIALNRKIALPRP---GDLLYIEKTGAYGAVQSGT---YNSRLLIPEIMVN-GSQ 397 C D + RK+ PR GDLL T Y ++ L P+++++ + Sbjct: 389 CLESDMLTW-RKVPFPRRPRTGDLLVYPNTAGYQ--MDSNESPFHDLALPPKVVIDHTDR 445 Query: 398 FHIIRPRMTFQ 408 RPR Sbjct: 446 A---RPRWRLD 453 >gi|227329050|ref|ZP_03833074.1| putative lysine/ornithine decarboxylase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 467 Score = 88.7 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 62/422 (14%), Positives = 113/422 (26%), Gaps = 38/422 (9%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT--MVCYALKANSNQAVIKTLAHL 74 L L +P + N D + Y K N + +++ + Sbjct: 42 RLSWLVEQYGSPLNIVWPHTVANNIAALRTVLQHHDVDCRLYYGAKVNKSPGLVQAAVNA 101 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES-------- 126 G G+D+ S EL+ AL A R+ +G KT + + + Sbjct: 102 GVGVDVSSLQELKDALRAGCDGARLCATGPAKTREFLTELVHHRALIVLDSPEEFDEVLA 161 Query: 127 ----------------ESELKTLNQRAVSLGKKAPIAFRV-NPDINANTHKKISTGKKED 169 N R L + I + +A + Sbjct: 162 LAELLRATEPVRVLLRYRPSFAQNSRFGMLADEVAICLETLSTRQDALHLEGFHFHLGGY 221 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + + + + + + IG + ++ + Sbjct: 222 EPDTRVAALAEVLPLLERARSKGLEPAIIDIGGGLPIQYLSASRYQEYLAKQNEADYRHG 281 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLI-HQYFGNLQCKIILEPGRFLVADVGILVT 288 + G + S+ + + +EPGR L I V Sbjct: 282 QVPTSFYPYGGERSAADYLDAFLSASIGQNRVADVLKHYGLILAIEPGRSLADQSAITVF 341 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYD----AYHEINYIVNPAGDRLHIHADIVGPI 344 +V ++ D V+ + T ++ + V A I G Sbjct: 342 RVTRTRRQPDGNHVVFVEGSSFSACETWFNSEFLIDPLHVFSVKKDTRPTPGKAWIAGHS 401 Query: 345 CETGDFIALNRKIA---LPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEI-MVNGSQFH 399 C D I NR I +P+PGDLL T Y ++ L + G + Sbjct: 402 CLDDDVIT-NRLIHFRTVPQPGDLLIYVNTAGYQMDLLENAFHRHPLPARLCAFKGKKGE 460 Query: 400 II 401 +I Sbjct: 461 LI 462 >gi|115961825|ref|XP_001194285.1| PREDICTED: similar to ornithine decarboxylase, partial [Strongylocentrotus purpuratus] Length = 312 Score = 88.7 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 64/329 (19%), Positives = 124/329 (37%), Gaps = 24/329 (7%) Query: 42 LTFSNAFDGMDTMVCYA-LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIV 100 + +A +K N+++ V++TLA+LG+G D S+ ELR+ L V +RI+ Sbjct: 7 RRVVETLANLGAGFDWATVKCNADRRVVETLANLGAGFDCASKTELRQVLDMGVHPDRII 66 Query: 101 FSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHK 160 ++ K I + A ++G+ ++E E+ + Q + I Sbjct: 67 YANPCKAISHLRFAKKNGVRLMTFDNEEEIIKIKQVFPTARLVLRIW----------AED 116 Query: 161 KISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL 220 K + KFG P+H++ L A L + G+ H+GS ES++ A + R Sbjct: 117 KTAVIPLSVKFGCPLHEVRRLLEAAKNLDLA-VEGICFHVGSGSGNPESYYAAIRDARTA 175 Query: 221 TQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLV 280 GH+++ ID+GGG S + + ++Y G+ + Sbjct: 176 YDIGNDIGHDLRIIDIGGGFPGKESSSIPFEKVYQMSIVPNEYPGSG------------L 223 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI 340 + + I + + + I + + L A + + + D + + Sbjct: 224 LTMYENWNDIKDISATPEVAYYISNNVYSTLGDSFLIGAKFDAKVLKSSNNDGSERPSVL 283 Query: 341 VGPICETGDFIALNRKIALPRPGDLLYIE 369 G D + + + GD L Sbjct: 284 WGNTTSRVDCVRRHCLLPELEEGDWLVFR 312 >gi|325849897|ref|ZP_08170936.1| hypothetical protein HMPREF9246_0184 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325479921|gb|EGC83004.1| hypothetical protein HMPREF9246_0184 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 72 Score = 88.3 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 27/64 (42%) Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410 + K+A DLL + GAY S YN L + V + + R + ++L Sbjct: 1 MIEKVKLAKVERDDLLLVLFAGAYTYSMSSNYNKLLKPAVVFVEDGKDYCAVKRQSLEDL 60 Query: 411 IELD 414 I+ D Sbjct: 61 IKRD 64 >gi|326331313|ref|ZP_08197605.1| Orn/DAP/Arg decarboxylase 2 [Nocardioidaceae bacterium Broad-1] gi|325950946|gb|EGD42994.1| Orn/DAP/Arg decarboxylase 2 [Nocardioidaceae bacterium Broad-1] Length = 457 Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 70/429 (16%), Positives = 135/429 (31%), Gaps = 43/429 (10%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQA 66 A+ ++ + +P + + +N + V YA K N++ A Sbjct: 16 DRFLADGAAVAEAIERFGSPLHVVFPQVMAENAASLKAVLRRHAVPHDVFYAHKVNASTA 75 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 ++ A G G+D+ S EL RALAA + I +G +A N + Sbjct: 76 LVAEAAAAGLGVDVASSAELDRALAAGFAPDWIEATGPKSPAFIQRIASL--GVTTNADD 133 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 EL L A + + + + + + Sbjct: 134 LWELDRLAAAAPAGSTVPVLLRLSGFASPLVPPSRFGIDLADADAALETVRRAPGLELRG 193 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKL-------------LRDLTQQLRSNGHNIQH 233 + + + + + + A++ + + Q Sbjct: 194 VAFHLDTADPAARVDALTESMAVVSAAYRKGLRPSVVDIGGGFRQRFVEDPEPFQRYAQA 253 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLIHQYF-------------------GNLQCKIILE 274 + G G + D P++ Y + + +E Sbjct: 254 LAAGPGELVWPGHDVVAPAAHKYGNHRPMTEVLDRFLAAEIERRPVAEVLRECMFTLWIE 313 Query: 275 PGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL 334 PG+ LV GI + +V+ K++A + V+LD++ N + V+ GD Sbjct: 314 PGKALVDHAGITLAEVLYRKRAAGRELVVLDLSRNQVTPADQEVLLDPVL--VDGHGDPP 371 Query: 335 HIHADIVGPICETGDFIALNRKI--ALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEI 391 + G +C D I+ + A PR GD+L T AY S P++ Sbjct: 372 DGGVFLGGRLCLESDLISRRKVFLDAEPRSGDVLAFVNTAAYQMDLSASAAAGHAPPPKV 431 Query: 392 --MVNGSQF 398 +++G +F Sbjct: 432 AAVLDGDRF 440 >gi|109087157|ref|XP_001083537.1| PREDICTED: antizyme inhibitor 1 isoform 6 [Macaca mulatta] Length = 363 Score = 88.0 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 65/333 (19%), Positives = 107/333 (32%), Gaps = 28/333 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L V+I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCKHLLECAKELD-VQIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQY 263 + A R + G + +D+GGG + P Y Sbjct: 207 VYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGV 266 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMR 313 + F +A I V + K + + + D F Sbjct: 267 KIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFAS 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 D D + + GP C+ Sbjct: 327 KLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCD 359 >gi|115741783|ref|XP_793679.2| PREDICTED: similar to ornithine decarboxylase, partial [Strongylocentrotus purpuratus] Length = 288 Score = 88.0 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 63/311 (20%), Positives = 121/311 (38%), Gaps = 23/311 (7%) Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +K N+++ V++TLA+LG+G D S+ ELR+ L V +RI+++ K I + A ++G Sbjct: 1 VKCNADRRVVETLANLGAGFDCASKTELRQVLDMGVHPDRIIYANPCKAISHLRFAKKNG 60 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + ++E E+ + Q + I K + KFG P+H++ Sbjct: 61 VRLMTFDNEEEIIKIKQVFPTARLVLRIW----------AEDKTAVIPLSVKFGCPLHEV 110 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 L A L + G+ H+GS ES++ A + R GH+++ ID+GG Sbjct: 111 RRLLEAAKNLDLA-VEGICFHVGSGSGNPESYYAAIRDARTAYDIGNDIGHDLRIIDIGG 169 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 G S + + ++Y G+ + + + I + + Sbjct: 170 GFPGKESSSIPFEKVYQMSIVPNEYPGSG------------LLTMYENWNDIKDISATPE 217 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + I + + L A + + + D + + G D + + + Sbjct: 218 VAYYISNNVYSTLGDSFLIGAKFDAKVLKSSNNDGSERPSVLWGNTTSRVDCVRRHCLLP 277 Query: 359 LPRPGDLLYIE 369 GD L Sbjct: 278 ELEEGDWLVFR 288 >gi|156340084|ref|XP_001620348.1| hypothetical protein NEMVEDRAFT_v1g148439 [Nematostella vectensis] gi|156205145|gb|EDO28248.1| predicted protein [Nematostella vectensis] Length = 166 Score = 88.0 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 16/144 (11%) Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK----------------TFVIL 304 + + II EPGR+ VA L +I+ K ++ + + Sbjct: 12 KYFPVDSGVTIIAEPGRYYVASAFTLAVNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVN 71 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D F A+ + P D + I GP C+ D I + + GD Sbjct: 72 DGVYGSFNCILFDHAHVKPVLTKKPKPDESFYSSSIWGPTCDGLDRIVERFDLPELQVGD 131 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLI 388 + E GAY S T+N Sbjct: 132 WMLFENMGAYTVAASSTFNGFQRP 155 >gi|300693591|ref|YP_003749564.1| diaminopimelate decarboxylase [Ralstonia solanacearum PSI07] gi|299075628|emb|CBJ34924.1| putative diaminopimelate decarboxylase [Ralstonia solanacearum PSI07] Length = 428 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 62/423 (14%), Positives = 113/423 (26%), Gaps = 38/423 (8%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-------TMVCYALKANSN 64 L + TP + YS + +N A + + N+N Sbjct: 23 WIAQADLPSICSQTGTPVFIYSEAQLIRNIRRVKAAISAAGLDGRVSIFVPFFP---NAN 79 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 V+K L G+G+ + E G +E Y + Sbjct: 80 PHVLKPLRDEGAGILLQMPNEYTLITQYGFS---DFIVSPGHVSNEEIAFWSKKNYPVFL 136 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 S E+ + + K K L A Sbjct: 137 ASLDEISYAIHENAPTISVRVDSLGSD--------------KPGIKVDQLGSLAEMLSAK 182 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 TL ++ + + I + F++ D RS H A Sbjct: 183 GRTLECFEVYCGSGNSLQGMIDI--ARQIFQMYLDHFPTARSINFAGGHGFNYEKWSEAE 240 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVT-----KVISIKKSADK 299 L + K + EPGR ++AD G+L+T V + Sbjct: 241 KHFDWKTYFQAIRDLAAEMKIPETVKFMFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVV 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI--ALNRKI 357 T + + +R ++ + D +A + G D+I Sbjct: 301 TDGSRMLMPSAQLRNRSHNTVFLDSAFNEIVNDSKRCNAKVRGRSILRNDYILPGEVVAP 360 Query: 358 ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDSI 416 + G+ + I GAY A Q + + E++V +++ + + Sbjct: 361 ETVKAGEYMLILDVGAYCATQHMEFLNVPPAGEVLVEANGAIYMVTKPGNELDKWRN-LL 419 Query: 417 PAW 419 P Sbjct: 420 PER 422 >gi|125606503|gb|EAZ45539.1| hypothetical protein OsJ_30199 [Oryza sativa Japonica Group] Length = 259 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 12/206 (5%) Query: 186 STLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 K+ + + + + + ++ +D+GGG Sbjct: 47 HVFDLAKVVDLHRGWRRALPDVRPCYAV----KAFDAAAALGMPPMRVLDIGGGFMAGRT 102 Query: 246 SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 D + +L + ++I EPGR+ L +VI + + +D Sbjct: 103 FDEAAAVINR--ALERHFGDLPCVEVIGEPGRYFAETAFTLAARVIGKRTRGELREYWID 160 Query: 306 VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD------IVGPICETGDFIALNRKIAL 359 + + L D Y + A A + GP C++ D + ++ Sbjct: 161 DGLYGSLNCILMDHYVPRPRPLAAAAAGEDTTAATTHASTVFGPTCDSLDTVVTGYQLPE 220 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSR 385 GD L + GAY +N Sbjct: 221 MSVGDWLVFDDMGAYTTAAGSNFNGF 246 >gi|5360176|gb|AAD42894.1|AF159564_1 ornithine decarboxylase [Leishmania tarentolae] Length = 732 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 15/216 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + + + +A+K+N AV++ L+ LG+G D S E++ Sbjct: 283 PFYIIDLGRVVEQMARWRHELPM--VRPYFAVKSNPQAAVLEVLSALGAGFDCASREEIQ 340 Query: 88 R--ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + I+F+ K + ++ A G+ V++ E++ +++ S Sbjct: 341 MVLRNNLVATPDDIIFANPCKQLSDMREAQACGVTYVTVDNPLEMEKISRVMPSARAIIR 400 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I T+ + KFG + + L A + GV H+GS Sbjct: 401 I----------KTNDSKAQCSFSTKFGASLEDVEGLLQVARQFNVA-VCGVSFHVGSGNY 449 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 ++ A + + QQ G + +D+GGG Sbjct: 450 DESAYVSAVRDAYQVFQQAAKYGFHCTILDIGGGFP 485 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 23/66 (34%) Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 + R I GP C++ D I + + GD L + G+Y + Sbjct: 634 FMSAWDRRRNLTSRPLRITTIFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAA 693 Query: 380 GTYNSR 385 G +N Sbjct: 694 GVFNGF 699 >gi|327403924|ref|YP_004344762.1| Orn/DAP/Arg decarboxylase 2 [Fluviicola taffensis DSM 16823] gi|327319432|gb|AEA43924.1| Orn/DAP/Arg decarboxylase 2 [Fluviicola taffensis DSM 16823] Length = 465 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 58/447 (12%), Positives = 122/447 (27%), Gaps = 40/447 (8%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPF---YCYSTTAIEKNYLT----FSNAFDG---- 50 F E L + L +L TP Y I N F A + Sbjct: 18 DEFHLREDRLMFHGIDLMRLIEEYGTPLKFNY---LPQITHNIQRAKGWFREAMNNLGYS 74 Query: 51 MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL---RRALAAPVPAERIVFSGVGKT 107 + Y K++ V+ + ++ S ++ + L A E G Sbjct: 75 GNYYYSYCTKSSHFSFVLDEVLKNDVHIETSSAFDIDIVKNILNAGKLKEGSYVICNGFK 134 Query: 108 IDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK 167 + + I + + + + ++ I A+ + Sbjct: 135 PPKYIQNIADLIEDKRLNIIPVVDNTAEIHDLIAATGENELKIGIRI-ASEEEPKFEFYT 193 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 + A+ P V+I + I + I+ + + L+ Sbjct: 194 SRLGIRYREIVPFYKAFIQDNPRVQIKMLHFFINTGINDTSYYWNELTKCLRIYSDLKKV 253 Query: 228 GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKII------LEPGRFLVA 281 + +++GGG I + ++ Q I E G F V Sbjct: 254 CPTLDSLNIGGGFPIKKSLAFEFDYAYMVREILMQVKRVCSDNDIPEPNIYTEFGSFTVG 313 Query: 282 DVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + G + V+ K+ D+ + + P + + + + + Sbjct: 314 ESGGAIFNVLHQKQQNDREKWNMIDSSFMTNLPDTWAINQRFIMLAINRWNDDYERVLLG 373 Query: 342 GPICETGDFI-----ALNRKIALPRPGDLLYI--EKTGAYGAVQSG----TYNSRLLIPE 390 G C++ D+ + + LYI TGAY G + Sbjct: 374 GLTCDSDDYYNSEQHSNAIYLPKFDKNKPLYIGYFNTGAYQETIGGFGGLKHCLIPEPKH 433 Query: 391 IMVNGSQFHIIR-----PRMTFQELIE 412 +++ + I T ++ + Sbjct: 434 VLIQRDEHGKIVTELFSEEQTAEDFMR 460 >gi|299069046|emb|CBJ40297.1| putative diaminopimelate decarboxylase [Ralstonia solanacearum CMR15] Length = 428 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 60/407 (14%), Positives = 116/407 (28%), Gaps = 37/407 (9%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-------TMVCYALKANSN 64 L + TP + YS + +N +A + + N+N Sbjct: 23 WIARADLPSICAQTGTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFP---NAN 79 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K L G+G+ + E + G +E Y + Sbjct: 80 PHILKPLRDEGAGILLQMPNEYKLITQYGFS---DFIVSPGHVSNEEIAFWSQKDYPVFL 136 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 S E+ + + + K K L A Sbjct: 137 ASLDEIAYAIREQAPTISVRIDSLGSD--------------KPGIKVDQLGDLAKLLSAN 182 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 TL ++ + + I + F++ D RS H A Sbjct: 183 GRTLECFEVYCGSGNSLQGMIDI--ARQIFRMYLDHFPTARSINFAGGHGFDYAKWSEAE 240 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-ISIKKSADKTFVI 303 L + + + EPGR ++AD G+L+T + I + + V+ Sbjct: 241 KHFDWTTYFQAIRDLATEMKIPETVRFLFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVV 300 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV----GPICETGDFIA-LNRKIA 358 D + L + H ++ + + V G D+I + Sbjct: 301 TDGSRMLMPSAQLRNRAHHTVFLDAAFNEVVDYSKRCVAKVRGRSILRNDYILPGDVVAP 360 Query: 359 L-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRP 403 + G+ + I GAY A Q + + E++V +++ Sbjct: 361 ETVKAGEYMLILDVGAYCATQHMEFLNVPPAGEVLVEADGAIYMVTR 407 >gi|296394834|ref|YP_003659718.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] gi|296181981|gb|ADG98887.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] Length = 453 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 69/407 (16%), Positives = 123/407 (30%), Gaps = 37/407 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAVIKTLA-HLGSGLDIVSEG 84 PF+ +N +F A + V Y KAN + + A G+G+D+ S Sbjct: 41 PFHVVFPERFAENLDSFIRALEAAGVEGVVYYGKKANKARCFTRRCANRDGAGVDVASSA 100 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 EL ALAA V + +V +G K + + A + G + EL+ A + Sbjct: 101 ELVEALAAGVRGKDLVVTGPAKNTELLWTAARHGALIAIDALD-ELERTIALAQDIAGVR 159 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + + A+ + + + S + S++ Sbjct: 160 ILLRVLPETNGASRFGLDTMELERALARCAEERERVRMEGFSFHLSGYAVAPRAQLSSEL 219 Query: 205 DQIESFHKAFKLLRDLTQQ-----LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 +A L+ D + + G +H+ + Y Sbjct: 220 VDRCVQARARGLVADSVSIGGGFAMNYLEPGDWAEFMSGYQDEWFHARKKFAYFYPYHQT 279 Query: 260 IHQYFG---------------------NLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + +++LEPGR L+ G V V K+ D Sbjct: 280 PVGADMLADILRSGLAPGYRALAEKFAKNKVRLLLEPGRALLDGCGFSVFPVQGFKERGD 339 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + + Y + G+ + A G C D + RK+ Sbjct: 340 YGVIAVGGVSMSVSAQWFDSEYLPDPELWPETGEHEPVPACAGGSTCLETDMLMW-RKVW 398 Query: 359 LPRP---GDLLYIEKTGAYGAVQS-GTYNSRLLIPE--IMVNGSQFH 399 L R GDLL T Y + ++ L P+ +M+ + Sbjct: 399 LARRPQFGDLLVYHNTAGYQMDFTESGFHQLPLPPKIPVMLKDGRPK 445 >gi|159901027|ref|YP_001547274.1| Orn/DAP/Arg decarboxylase 2 [Herpetosiphon aurantiacus ATCC 23779] gi|159894066|gb|ABX07146.1| Orn/DAP/Arg decarboxylase 2 [Herpetosiphon aurantiacus ATCC 23779] Length = 576 Score = 87.6 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 120/398 (30%), Gaps = 28/398 (7%) Query: 2 SAFKYFEGSLHAEN-VSLEKLAHVVQTPFYCYSTTAIEKNYLTF-------SNAFDGMDT 53 L + V L L P I A + Sbjct: 83 DFLTRRNERLLLGDTVDLGALVEQFGAPLEVSFCPQITTQVQNMLDYAMAAQAASSYTGS 142 Query: 54 MVC-YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA----ERIVFSGVGKTI 108 + YA KAN ++ V++T + G+ + + ++ A +R +F K Sbjct: 143 FLYAYATKANFSEEVVRTALNAGAHYETSAAADVVIAHHLWRQGVLSEDRYIFCNGSKEP 202 Query: 109 DEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 +D L + + + P+ F V + + G + Sbjct: 203 MYLDGILALRQAGYERVVAVLDDLDELDYILAHCRVPMLFGVRERHAPDVVDRNHAGAE- 261 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 +FG+ ++ + + ++ +GSQI+ ++ + L S Sbjct: 262 -RFGLTPAEMQLVAQRLAGT-QHQLVVYHAMVGSQIEDAAAWEARLARSANAYAALASTT 319 Query: 229 HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVA 281 ++ + GGG+ + + + + + + II E GR+ VA Sbjct: 320 PSLTMFNFGGGMPTSGYDLAFQFDYVGFLTNLMANTQAICAEHGVAAPMIIAECGRYTVA 379 Query: 282 DVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + + + +V +K++ L P E + D + Sbjct: 380 NHNLYLIEVGRVKEAGAIEPWYLLNGSLMVSAPDTLIVDQEFVVVPLDGWDTAVQAVRLG 439 Query: 342 G-PICETGDFIALNR----KIALPRPGDLLYIEKTGAY 374 G C++ D + + + G +L + GAY Sbjct: 440 GRRTCDSDDLYPRSHRPALMLPEFQAGMVLAVCGVGAY 477 >gi|126642606|ref|YP_001085590.1| putative ornithine decarboxylase [Acinetobacter baumannii ATCC 17978] Length = 325 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 72/328 (21%), Positives = 127/328 (38%), Gaps = 17/328 (5%) Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +I+ L +GS D+ S EL++ A V A R+ F K +I + GI + +S Sbjct: 1 MIERLCRIGSSFDLASVNELKKVQAFGVDASRLAFGNTIKKRADIQYFYEQGIRLYVTDS 60 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 +++L + Q A ++ + + KFG + L A Sbjct: 61 DADLNNIAQYAPGSKVFFRLSIDGSETAD---------WPLSGKFGCNAECVIRLAVKAK 111 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKA-FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 L + G+ H+GSQ +I+ + A + + + +++ +++GGGL Y Sbjct: 112 ELGLI-PYGISFHVGSQQRKIDLWDSALAETKAIFDVLVNDHQIHLKMLNLGGGLPAQYV 170 Query: 246 SDHRPPSSS--DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 +S + + + +IILEPGR LV + GILV++++ I + Sbjct: 171 QQTEAFASYSKQINAALEMFKPYQLEQIILEPGRSLVGNAGILVSEIVLISQRPQSGTKR 230 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN--RKIAL-P 360 + I Y + + GP C++ D + N ++ L Sbjct: 231 WVYTDVGVFNGLIETLGEAIQYPIVCKKTGQSDDIILAGPTCDSMDIMYQNKKYELPLSL 290 Query: 361 RPGDLLYIEKTGAYGAVQSG-TYNSRLL 387 GD LY TGAY S +N Sbjct: 291 EIGDHLYWLSTGAYTTSYSSIEFNGFPP 318 >gi|88802967|ref|ZP_01118494.1| arginine decarboxylase [Polaribacter irgensii 23-P] gi|88781825|gb|EAR13003.1| arginine decarboxylase [Polaribacter irgensii 23-P] Length = 482 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 47/395 (11%), Positives = 108/395 (27%), Gaps = 24/395 (6%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 F+ L ++L L P + Y I +N F + D + Sbjct: 19 EFQTENNKLFWRGINLMDLIATYGAPLKFTY-LPKISENINKAKGWFQASIDKHNYKGNY 77 Query: 55 -VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAE-RIVFSGVGKTIDEID 112 Y K++ + V+ ++ S ++ L + + + Sbjct: 78 FYSYCTKSSHFKHVLNEALKNDIHIETSSAFDIDIVLNLKKEGKIKDSTFVICNGFKRDQ 137 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 G + N + L +K A+ + Sbjct: 138 YIQNIGNLINSGHENCIPIIDNFEELPLLQKETSKPFKVGIRIASEEEPKFEFYTSRLGI 197 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + + V++ + I + I + ++ L+ + Sbjct: 198 GYKNIVSFYEREIADNEQVELKMLHFFINTGIRDNAYYWNELMKCLNVYINLKKVCPTLD 257 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGIL 286 +++GGG I ++HQ I E G F V + G Sbjct: 258 SLNIGGGFPIKNSLAFDFDYQYMIDEIVHQIKQACDEAEVSVPNIFTEFGSFTVGESGAT 317 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +++ KK D+ + + P + + ++ + + G C+ Sbjct: 318 IYEILYQKKQNDRERWNMINSSFITTLPDSWAINKRFIMLPINKWNKQYERVLLGGLTCD 377 Query: 347 TGDFI-----ALNRKIALPRPGD--LLYIEKTGAY 374 + D+ + + + + TGAY Sbjct: 378 SDDYYNSEQHINGIYLPVYEKNNPLYIGFFNTGAY 412 >gi|21780355|gb|AAM77691.1|AF522351_1 ornithine decarboxylase [Sorghum bicolor] Length = 339 Score = 87.2 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 105/292 (35%), Gaps = 13/292 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + ++ A + YA+K N + + LA +GS D S E+ Sbjct: 58 PFYVLDLGEVVSLMDQWNVALP--NVRPFYAVKCNPEPSFLSMLAAMGSNFDCASRAEIE 115 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + ERIVF+ K +I A + G+ + E E+ + + + Sbjct: 116 YVLSLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDLEDEVYKIKKHHPKCE--LLLR 173 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + D NA KFG +I ++ A + +SGV HI S Sbjct: 174 IKPMSDGNA-------RCPMGSKFGAFPEEIEPVFRIAQAS-RLTVSGVSFHIDSGDADS 225 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ A + + + G + ++ G + H ++ A H + Sbjct: 226 NAYLGAIAAAKQVFETAAKFGMSKMNVLDIDGGFTSGHQFTTATTTVKSALQQH-FSNEP 284 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + II PGRF L T +I + D ++ + M LYD Sbjct: 285 ELTIIAGPGRFFAETAYTLATTIIGKRVRGDLREYWINDGLYGSMNCVLYDN 336 >gi|332254722|ref|XP_003276481.1| PREDICTED: arginine decarboxylase-like [Nomascus leucogenys] Length = 377 Score = 87.2 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 64/317 (20%), Positives = 112/317 (35%), Gaps = 22/317 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F YA+K NS+ V+K LA LG G ++ E+ Sbjct: 41 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VPA +I+ + K I +I A + GI + ++E EL + + S IA Sbjct: 99 VQQIGVPASKIICANPCKQIAQIKYAAKHGIRLLSFDNEMELAKVVKSHPSAKMVLCIA- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T S + KFG+ + L A V++ GV HIGS + Sbjct: 158 ---------TDDSHSLSRLSLKFGVSLKSCRHLLENAKKS-HVEVVGVSFHIGSGCPDPQ 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 + ++ R + + GH + +D+GGG + R + + + Sbjct: 208 VYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTKGAKVRFDQIASVINSALDLYFPEG 267 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + E GR+ V + +I+ +L Sbjct: 268 CGVDVFAELGRYYVTSAFTVAISIIA-------KKEVLLDQPGREAPLPPPHIATCAAPD 320 Query: 327 VNPAGDRLHIHADIVGP 343 P+ ++ + + GP Sbjct: 321 PKPSTEQPVYSSSLWGP 337 >gi|119945950|ref|YP_943630.1| carboxynorspermidine decarboxylase [Psychromonas ingrahamii 37] gi|119864554|gb|ABM04031.1| carboxynorspermidine decarboxylase [Psychromonas ingrahamii 37] Length = 376 Score = 87.2 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 56/376 (14%), Positives = 113/376 (30%), Gaps = 25/376 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP++ + +N + ALK S T+ G E+ Sbjct: 10 TPYFMVDEKKLIENLEKAKQLKKISGAKLVLALKCFSTWGTFDTIKPYLDGTTSSGPFEV 69 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E +S + D +A S FN L L + A + Sbjct: 70 QLGHE-TFGGETHAYSVGYSSHDINTVAPLSDKIIFNS-----LTQLATHFEAANPFASL 123 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP+ + + + + G+ L + VD + + Sbjct: 124 GLRINPERSVAGQDLANPTRPYSRLGV----------KQDLLDLSIVDKVDGFMFHMNCE 173 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + ++L ++ +++ + +GGG+ A + + Sbjct: 174 NKDADAFIEILDYISNTFAEYLTHLKWLSLGGGIFFTAPD----YPIEKLALALKAFSEK 229 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 Q ++ LEPG ++ LV VI I + KT ++ + +Y+ Sbjct: 230 HQLQLYLEPGEAIITRTADLVVSVIDIVDNNKKTAIVDSATEAHRLDTLIYN----EPAS 285 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 + A I C GD + + G L+I + Y V+ +N Sbjct: 286 IGEASADGAFPYIIGSCSCLAGDQFCETQFDEALQIGQKLHILDSAGYTMVKLNWFNGLK 345 Query: 387 LIPEIMVN-GSQFHII 401 + + ++ Sbjct: 346 MPSIYYKRVDGEIELL 361 >gi|152974010|ref|YP_001373527.1| Orn/DAP/Arg decarboxylase 2 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022762|gb|ABS20532.1| Orn/DAP/Arg decarboxylase 2 [Bacillus cytotoxicus NVH 391-98] Length = 434 Score = 87.2 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 74/354 (20%), Positives = 145/354 (40%), Gaps = 9/354 (2%) Query: 31 CYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y I+ NY + NAF+ + + +ALK N A I+ L +G ++++S EL+ Sbjct: 46 IYFDQRIKDNYYSIYNAFNKYFKNVSIHFALKCNYIPACIEALFKVGCSVEVMSSIELQI 105 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 AL + E L +++ ++L+ +N ++ LGKK PI Sbjct: 106 ALQNGFK-RNQIVCNGLGKTKEELLQELENSKLIFIDNINDLERINSLSLDLGKKIPIGL 164 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 RV P+I +++H+++ + L T + I G+ H+ S + Sbjct: 165 RVLPNIKSSSHEEVMIKPSSKLGMDINTAMEFLKQSKETNSNLNIIGIQFHLMSHLKDCS 224 Query: 209 -SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS--LIHQYFG 265 + L + ++ Q+I++GGG + ++ S A Sbjct: 225 LYKEYLSSIESFLENVYKELNYSFQYINLGGGFETRFIMENNNIDISSLAKIAYDKLKNL 284 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 ++I+EPGR+++AD +++ +IS KKSAD + I D+ N + + Y Sbjct: 285 PYDYELIVEPGRYIMADAAVILASIISEKKSADVNWKITDIGSNILIPVPNIEYY--TIP 342 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 G++ ++ C + + ++ + + + GAY +V S Sbjct: 343 YKLNDGNQPWERYNVGDATCAPS-HLCKDVELPSQLVENKIIVLNCGAYTSVYS 395 >gi|167948474|ref|ZP_02535548.1| diaminopimelate decarboxylase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 334 Score = 86.8 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 68/344 (19%), Positives = 118/344 (34%), Gaps = 30/344 (8%) Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS E +A + VP ERI+F+G K + ++ + G + E+ TL A + Sbjct: 2 VSAFEYEKARSHGVPGERILFNGPHKQREILERVVAEGARVHIDNLD-EMYTLEAIAAEV 60 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 G+ P+ R+N D F I Q P +++ G+ HI Sbjct: 61 GRTIPVTIRLNFDTGYTEPWSRF------GFNIETGQALDAARRIGNSPHLRLRGLHSHI 114 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG--------LGIAYHSDHRPPS 252 G+ I ++ +++ + S GG G + P Sbjct: 115 GTFILDTRAYEAQVRIMCAFMETAESETGCEIDSIDIGGGFASRNALHGTYLPPEQVVPE 174 Query: 253 SSDYASLIHQ----------YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 YA I G Q +ILE GR V D G L++ V++ K D Sbjct: 175 IEQYAQAICDTLLEATRGRTARGKPQPTLILETGRATVDDAGSLISSVVATKHLPDGRR- 233 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRP 362 ++ + ++ + + + GP+C D + + + R Sbjct: 234 --SAVLDAGVNLLFTSFWYNHRVELAQPPQGIPEETVLYGPLCMNIDVVRASVTLPPLRV 291 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRM 405 G+ L + GAY Q + +M + G + +IR Sbjct: 292 GERLVVSPVGAYNNTQWLQFIEY-RPNVVMTHGGGEVSVIRQAE 334 >gi|221103505|ref|XP_002159193.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 166 Score = 86.8 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 46/126 (36%), Gaps = 7/126 (5%) Query: 273 LEPGRFLVADVGILVTKVISIKKSADKT------FVILDVAMNDFMRPTLYDAYHEINYI 326 EPGR+ VA L V SI++ + L+ + L+D Sbjct: 1 AEPGRYFVASAFTLTCNVTSIREVSTNKNSPPGFMYYLNDGVYGSFNCILFDHQSPTPLT 60 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 ++ + GP C++ D I+ + + GD LY E GAY S +N Sbjct: 61 LHETDHCPRYKCSLWGPTCDSMDCISKDSYLPKLMIGDWLYFENMGAYTIAPSIKFNGF- 119 Query: 387 LIPEIM 392 P + Sbjct: 120 KPPVVF 125 >gi|333026504|ref|ZP_08454568.1| putative orn/DAP/Arg decarboxylase, family 2 [Streptomyces sp. Tu6071] gi|332746356|gb|EGJ76797.1| putative orn/DAP/Arg decarboxylase, family 2 [Streptomyces sp. Tu6071] Length = 448 Score = 86.8 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 68/396 (17%), Positives = 125/396 (31%), Gaps = 17/396 (4%) Query: 31 CYSTTAIEKNYLTFSNAFD------GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 T I + +AF G +A++A V++ L G ++ S Sbjct: 42 LLDVTGIRRTARALQSAFAPLVAEGGPAVRHTFAVRATPLVPVLRLLYEDRIGAEVASAA 101 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 EL A AA V V KT+ E+ AL SG+ +V+ EL+ L+ + Sbjct: 102 ELALARAAGVQPGHTVLDSPTKTVAELREALGSGVL-VDVDDAQELERLDALRGEAAATS 160 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQ 203 RV+P A + I + + + L ++ + Sbjct: 161 TFGVRVDPHAGAERRAVFGVALGHEGAREWILSAFAERPWLTRLHAHSEVKNAGGVAPER 220 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + + R + G D + YA+L+ + Sbjct: 221 LAEGVRKVYELAEEINAAAGRRQVDALALGGGLAAGAREGDTGDGDGADFAGYAALLKET 280 Query: 264 F---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + + ++ GR L+A G L+ +V ++ + + Sbjct: 281 VPGLFDGRYALVTGFGRSLLAGHGFLLARVEYVRAMGGRRLAVTHAGTRMAGHACGRRLA 340 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + + D+ GP G+ +A ++ GD L + TGAYG + Sbjct: 341 AYDAQ--GRPKEGPALAQDLAGPAQFDGELLASGVELPELEQGDWLAVLDTGAYGFARHQ 398 Query: 381 TYNSRLLIPE----IMVNGSQFHIIRPRMTFQELIE 412 Y+S G +F +R T E + Sbjct: 399 AYDSLTRPGIHGFAAGAEGVRFATVRAAQTLAEFVA 434 >gi|225011270|ref|ZP_03701727.1| Orn/DAP/Arg decarboxylase 2 [Flavobacteria bacterium MS024-3C] gi|225004580|gb|EEG42545.1| Orn/DAP/Arg decarboxylase 2 [Flavobacteria bacterium MS024-3C] Length = 466 Score = 86.8 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 52/431 (12%), Positives = 115/431 (26%), Gaps = 48/431 (11%) Query: 3 AFKYFEGSLHAENVSLEKLAHVVQTPF-YCYSTTAIEKNYLT----FSNAFDGMD----T 53 F + +L + LEKL TP + Y I +N F NA D Sbjct: 19 EFTLEDENLRFHGIELEKLVAQYGTPLKFTY-LPKISENIQHAKGWFDNAIKKNDYKGKY 77 Query: 54 MVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAA----PVPAERIVFSGVGKTID 109 CY K+ + V++ ++ S ++ + + + V K Sbjct: 78 YYCYCTKSAHFKHVLEEALSNDIHIETSSAFDINIVESLKEAGKIKPDTFVICNGFKRAQ 137 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 +D + +S + + T + Sbjct: 138 YVDNIARLINSGHENCIPIIDNYEEISLLSEKIDGDYKIGIRIASEEEPKFEFYTSRLGI 197 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 + + + V++ + I + I + + +L+ Sbjct: 198 GY---RNIVPFYEDQIKGNDKVELKMLHFFINTGIGDNAYYWNELSKCLKVYVRLKKICP 254 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL------QCKIILEPGRFLVADV 283 ++ +++GGG I + +++Q I E G F V + Sbjct: 255 SLDSLNIGGGFPIKNSLAFEYDYAYMIEEILNQINAICAEADVPVPHIFTEFGSFTVGES 314 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 G + +V+ K+ D+ + + P + + + + G Sbjct: 315 GGAIYQVLYQKQQNDREKWNMIDSSFITTLPDTWAINKRFIMLPINRWQDEYERVLLGGL 374 Query: 344 ICETGD--------------FIALNRKIALPRPGDLLYIEKTGAYGAVQSG----TYNSR 385 C++ D + + + TGAY G + Sbjct: 375 TCDSDDYYNSEQNMNAIYLPVFKKEKPL-------YIGFFNTGAYQESIGGFGGLQHCLI 427 Query: 386 LLIPEIMVNGS 396 +++ Sbjct: 428 PTPKHVLIQKD 438 >gi|125582123|gb|EAZ23054.1| hypothetical protein OsJ_06749 [Oryza sativa Japonica Group] Length = 450 Score = 86.8 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 53/378 (14%), Positives = 96/378 (25%), Gaps = 24/378 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F + + + + G YA+K N N A++ LA LG+G D S Sbjct: 63 FNVIDLGEVARLFAAWWRGLRG--VRPYYAVKCNPNPALLGALAGLGAGFDCASRPRDGG 120 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A + + + ++ +Q A Sbjct: 121 RAGARRRGRPRRLREPVQAGAPPGVRGRRRRRPHHLRLRG-GGRQDQALPPGVPAAATDQ 179 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 H K+ + + + + S Sbjct: 180 GPRRRRWRRRHAKLGNQVRRAPGRGGAAPRRRAASRGWPSSASRSTSGAPCPASASTPPP 239 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 S AF L GGG G + + S+ A Sbjct: 240 SRRPAFDAAAALGMPRMHVLDIGGGFKAGGGGGESTFQEASAVISAALARHFGGDDMPSG 299 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN---- 324 ++I EPGR+ L ++ + + +D M + ++ Y Sbjct: 300 VEVIAEPGRYFAETAFALAARIFGKRTRGEVREYWIDDGMFGTLCCVHFENYVPRPAPVT 359 Query: 325 -----------------YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY 367 I + + + GP ++ D + ++ GD L Sbjct: 360 ATADDGDEQAATMGGEMMITSTNTSTKTHPSTVFGPTLDSFDEVVRGYQLPELCTGDWLV 419 Query: 368 IEKTGAYGAVQSGTYNSR 385 + GAY V S +N Sbjct: 420 FDDVGAYTTVCSSDFNGF 437 >gi|113205426|gb|AAU90343.2| Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein [Solanum demissum] Length = 262 Score = 86.4 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 96/247 (38%), Gaps = 9/247 (3%) Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + + R+ ++ + KFG +I SL YA + G+K+ GV H Sbjct: 9 WHPQCRLLLRIKAPSDSGS-----LRPLGKKFGALPEEIESLLHYACNVAGLKVVGVSFH 63 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSN-GHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 +GS + +A R + +Q +++GGG + S Sbjct: 64 VGSIAQDPTIYREAIANARAVFDVADYLGIPKMQILNIGGGFRSTPLFEEIA---SVVNE 120 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + +F + KII EPGRF LVT VI + +K +D + RPTLY+ Sbjct: 121 AVQDFFPDPNLKIIAEPGRFFPETAFTLVTHVIGKRVRGEKIEYWIDEGIYGSFRPTLYN 180 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 + ++ + I GP C++ D +A++ K+ DL+ GAY Sbjct: 181 SCFVGIKTISMKESCEIGESTIYGPSCDSLDAVAVDIKLPELELDDLIVFYDMGAYSKCA 240 Query: 379 SGTYNSR 385 +N Sbjct: 241 GTKFNGF 247 >gi|149178621|ref|ZP_01857207.1| probable diaminopimelate decarboxylase [Planctomyces maris DSM 8797] gi|148842547|gb|EDL56924.1| probable diaminopimelate decarboxylase [Planctomyces maris DSM 8797] Length = 501 Score = 86.4 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 89/451 (19%), Positives = 150/451 (33%), Gaps = 80/451 (17%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLG 75 L +LA +P +T E+N + + G++ V +A KAN A ++T + G Sbjct: 48 LPELAQKQGSPLNVLNTQPFERNAKALYDVAEAQGLEFDVYFARKANKCLAFVETAKNQG 107 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G+D S EL++ L VP E+I+ + K+ + L ++SG+ V+ EL + Sbjct: 108 YGVDTASIQELQQVLDNQVPPEKIICTAAVKSEALLRLCIKSGVT-IAVDHLDELMQIVI 166 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L ++A IA R++ + G D I A L + + G Sbjct: 167 LAEQLKQRADIAVRLSGFQHQGARLLSRFGF--DLDEIRPLIEDLQNASPHCLQYLNLIG 224 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY------HSDHR 249 V H+ A + L L +LRS ++ +D+GGG ++Y Sbjct: 225 VHFHLD--GYCQAQRVSAIQQLLPLIDELRSRDFPVRFLDIGGGFPMSYLESETEWDTFW 282 Query: 250 P--------------------------------PSSSDYASLIHQYFG------------ 265 P+ Y Q Sbjct: 283 QTHRRALLGEHRPLTYRNHGLGLTLVEGTLIGKPNCYPYYQSPVQANWLEGILTSECEAG 342 Query: 266 -------NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 Q ++ EPGR L+ G +V K+ ++I R + D Sbjct: 343 TIADSLRKRQIQLRCEPGRSLLDGCGFTAARVEFRKQQPTGDWLIGLSMNRTQCRTSSDD 402 Query: 319 AYHEINYIVNPAGD-----RLHIHADIVGPICETGDFIALNRKIALPR---PGDLLYIEK 370 + I I +VG C + + L RK+ P GDL+ Sbjct: 403 FLVDPLLIPATEESLLPRTPAGISGYLVGAYCTESELLCL-RKLQFPHGVGIGDLIVFPN 461 Query: 371 TGAYGA----VQSGTYNSRLLIPEIMVNGSQ 397 T Y +S + L ++ + Sbjct: 462 TAGYFMHFLESRSHQF---PLAQNVVYDNDT 489 >gi|318062629|ref|ZP_07981350.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actG] gi|318079938|ref|ZP_07987270.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actF] Length = 448 Score = 86.4 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 70/396 (17%), Positives = 125/396 (31%), Gaps = 17/396 (4%) Query: 31 CYSTTAIEKNYLTFSNAFD------GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 T I + +AF G +A++A V++ L G ++ S Sbjct: 42 LLDVTGIRRTARALQSAFAPLVAEGGPAVRHTFAVRATPLVPVLRLLYEDRIGAEVASAA 101 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 EL A AA V V KT+ E+ AL SG+ +V+ EL+ L+ + Sbjct: 102 ELALARAAGVQPGHTVLDSPTKTVAELREALGSGVL-VDVDDAQELERLDALRGEAAATS 160 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQ 203 RV+P A + I + + + L ++ + Sbjct: 161 TFGVRVDPHAGAERRAVFGVALGHEGAREWILSAFADRPWLTRLHAHSEVKNAGGVAPER 220 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + + R + G D + YA+L+ + Sbjct: 221 LAEGVRKVYELAEEINAAAGRRQVDALALGGGLAAGAREGDTGDGDGADFAGYAALLKET 280 Query: 264 F---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + + ++ GR L+A G L+ +V ++ + + Sbjct: 281 VPGLFDGRYALVTGFGRSLLAGHGFLLARVEYVRAMGGRRLAVTHAGTRMAGHACGRRLA 340 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 G L D+ GP G+ +A ++ GD L + TGAYG + Sbjct: 341 AYDAQGRPKGGPALAQ--DLAGPAQFDGELLASGVELPELEQGDWLAVLDTGAYGFARHQ 398 Query: 381 TYNSRLLIPE----IMVNGSQFHIIRPRMTFQELIE 412 Y+S G +F +R T E + Sbjct: 399 AYDSLTRPGIHGFAAGAEGVRFATVRAAQTLAEFVA 434 >gi|227505167|ref|ZP_03935216.1| possible decarboxylase [Corynebacterium striatum ATCC 6940] gi|227198240|gb|EEI78288.1| possible decarboxylase [Corynebacterium striatum ATCC 6940] Length = 470 Score = 86.4 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 61/397 (15%), Positives = 115/397 (28%), Gaps = 33/397 (8%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNA--FDGMDTMVCYALKANSNQAV 67 L A+ ++ L +P + +N +A G+DT V +A KAN A Sbjct: 37 ELIADPHAVRALIEKHGSPVNVLDPRPLARNAAELVDAGTALGVDTRVFFARKANKALAF 96 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G G+D+ S ELR+ LA VP + ++ S K + A+++G + +S Sbjct: 97 VGAARAAGHGVDVASLNELRQVLAVGVPPKDVILSAAIKDERLLRTAVKAG-VVISCDSR 155 Query: 128 SELKTLNQRAVSLGKKAPIAFRVN--PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYA 185 EL + +A P + + L+ YA Sbjct: 156 DELARIAALGTPARIAPRLAPDPTVLPPTRFGERLDVWRSIDWPDTVEAVGVHVHLHGYA 215 Query: 186 STLPGVKI--------------SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 + + + + + + + R Sbjct: 216 ESDRRLALAEAITLVEALRAAGHPASFIDIGGGVPMSYLLHETQWEQYRDRIERQRAGTG 275 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASL-----------IHQYFGNLQCKIILEPGRFLV 280 + + + P+ ++ + + LEPGR L+ Sbjct: 276 EPFTWKNDPLTNTYPFWQTPTRGEWFTQLLKGKVSGYGTAATALREHSIALHLEPGRSLL 335 Query: 281 ADVGILVTKVIS-IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 G+++ +V ++S + L + +R Sbjct: 336 DGCGMILAEVSFLKERSDGLPLIGLAMNRTQCRTAADDLLLDPFLVPTAGEVERAPRTGF 395 Query: 340 IVGPICETGDFIALNR-KIAL-PRPGDLLYIEKTGAY 374 +VG C + I GD L I T Y Sbjct: 396 LVGAYCIEDEVILRRALDFPDGIAVGDTLAIPNTAGY 432 >gi|211639074|emb|CAR67686.1| Diaminopimelate decarboxylase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] Length = 204 Score = 86.0 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 7/192 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L +L TP + Y + I + FD +V +A KA SN +++ + G Sbjct: 16 NLSRLPEAYGTPLWVYDSETIIQKIKLLCQ-FD----VVRFAQKACSNTHILRLMREYGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 +D VS GE+ RAL A S + T D ID + + + + + Sbjct: 71 KVDAVSLGEIERALRAGFCP-GQAESDIVFTADLIDGPTLQQVTKLGIPVNAGSIDMLEH 129 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 K P+ R+NP +K +TG + K GI + +K+ G+ Sbjct: 130 IGRYRKGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYQDLPLAIEKIRHYE-LKLLGL 188 Query: 197 DMHIGSQIDQIE 208 MHIGS +D Sbjct: 189 HMHIGSGVDYQH 200 >gi|1149670|emb|CAA60230.1| lysA [Clostridium perfringens] Length = 160 Score = 86.0 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 74/149 (49%), Gaps = 2/149 (1%) Query: 29 FYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 CY + N + NA V YA KA N ++ + LD+VS GEL Sbjct: 1 LICYDEELVRSNCRRYYNAMKCEERGNRVTYAGKAFINMSMCNLVNEENLYLDVVSGGEL 60 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A A P ERI F G K+ EIDL ++ GI F V++ EL+ LN A G+ + Sbjct: 61 YTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRVQKV 120 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPI 175 R+ P + A+TH+ I TG+ + KFG P+ Sbjct: 121 YLRITPGVEAHTHEYIKTGQLDSKFGFPV 149 >gi|300697287|ref|YP_003747948.1| diaminopimelate decarboxylase [Ralstonia solanacearum CFBP2957] gi|299074011|emb|CBJ53548.1| putative diaminopimelate decarboxylase [Ralstonia solanacearum CFBP2957] Length = 428 Score = 86.0 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 56/412 (13%), Positives = 110/412 (26%), Gaps = 47/412 (11%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-------TMVCYALKANSN 64 L + TP + YS + +N +A + + N+N Sbjct: 23 WIAQADLLSICAQTGTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFP---NAN 79 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K L G+G+ + E + G +E Y + Sbjct: 80 PHILKPLRDEGAGILLQMPNEYKLITQYGFS---DFIVSPGHVSNEEIAFWSKKHYPVFL 136 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 S E+ + + + K K L A Sbjct: 137 ASLDEIAYAIRENAPTISVRIDSLGSD--------------KPGIKVDQLGSLAQMLSAS 182 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 TL ++ + + I + F++ D RS H Sbjct: 183 GRTLECFEVYCGSGNSLQGMIDI--ARQIFRMYLDHFPTARSINFAGGHGFNYEKWSETE 240 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVT-----KVISIKKSADK 299 L + K + EPGR ++AD G+L+T V + Sbjct: 241 KHFDWTTYFQAIRDLATEMKIPETVKFMFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVV 300 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA- 358 T + + +R ++ + A + G + + + Sbjct: 301 TDGSRMLMPSAQLRNRSHNTVFLDSAFNEVVDYSKRCSAKVRGRS-----ILRNDYILPG 355 Query: 359 ------LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRP 403 + G+ + I GAY A Q + + E++V +++ Sbjct: 356 EVVAPGTIKAGEYMLILDVGAYCATQHMEFLNVPPAGEVLVEADGTIYMVTK 407 >gi|1834397|emb|CAA69402.1| ornithine decarboxylase [Crithidia fasciculata] Length = 721 Score = 86.0 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 107/319 (33%), Gaps = 20/319 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + + + + +A+K N N A+++ L LG+G D S+ E+ Sbjct: 288 PFYMIDLGRVVEQMARWRHELPM--VRPHFAVKCNPNLAIMEVLGALGAGFDCASKDEIH 345 Query: 88 --RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + IVF+ K + ++ A G+ V++ E++ + + S Sbjct: 346 LVLDNHLVDSPDDIVFANPCKQLGDLREARACGVTYVTVDNVPEMEKIGRMLPSARAIIR 405 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I T+ + KFG + + SL A V++ GV H+GS Sbjct: 406 I----------KTNDAAAKCAFSTKFGAGMDDVESLLQAARQH-NVEVYGVSFHVGSGNG 454 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLI 260 ++ A + + Q G N +D+GGG + ++ Sbjct: 455 DQSAYVSALRDSYRVFQLAAGYGFNCTVLDIGGGYPGTEPIPGSGETSFETIARAMRPVL 514 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + FG II EPGR+ A L V + + + + Sbjct: 515 EELFGGGDVTIISEPGRYFTAATHALAMNVFATRTLRLSDVEKENCQAFQNVVNMDEPEE 574 Query: 321 HEINYIVNPAGDRLHIHAD 339 ++ I D Sbjct: 575 YQYYVNDGLYHSFNCIVFD 593 Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 19/62 (30%) Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 R I GP C++ D I + + GD L G+Y +N Sbjct: 647 WDRRRNLTRRPLRITTIFGPTCDSMDCILKKQPFPEMKLGDWLLAPDMGSYTTAAGCPFN 706 Query: 384 SR 385 Sbjct: 707 GF 708 >gi|156742443|ref|YP_001432572.1| Orn/DAP/Arg decarboxylase 2 [Roseiflexus castenholzii DSM 13941] gi|156233771|gb|ABU58554.1| Orn/DAP/Arg decarboxylase 2 [Roseiflexus castenholzii DSM 13941] Length = 528 Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 132/393 (33%), Gaps = 29/393 (7%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAI---EKNYLTFSNAFDGM-----DTMVCYAL 59 + L A+ + L +A P I + ++ A D + YA Sbjct: 31 DRLLLADQIDLNAMAARYGAPLEVVYCPQITVQIERMREWAEAARARSGYAGDFIYAYAT 90 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAA----PVPAERIVFSGVGKTIDEIDLAL 115 KAN + V++T G+ + + ++ A +P++R +F K I + Sbjct: 91 KANFAEEVVRTAISSGAHYETSAAADVAIAHYLWQQGVLPSDRFIFCNGSKDHAYIAAIV 150 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 F + + P+ V ++FG+ Sbjct: 151 TLRHAGFARVVPVIDDLDELETLLAMCREPLLLGVRERHTPA--DVDVNHPGGERFGLTP 208 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 +I + P ++ +GSQI+ E +++ + +LR ++ + Sbjct: 209 DEIARVVERLHHTP-HRLVMYHAMVGSQIEDPERWNERLARSAEAYARLRQRAPSLWLFN 267 Query: 236 VGGGLGIAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADVGILVT 288 GGG+ + +S + + + Q ++ E GR+ VA + + Sbjct: 268 FGGGMPTSAYSLDFRFDYAGFLDRLMTMLAAVCDTHHIPQPTLVGEFGRYTVASHNVFIM 327 Query: 289 KVISIKKSAD--KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP-IC 345 +V +K +V+L+ ++ + +L E + D+ + G C Sbjct: 328 EVGRVKCGQGAAPDWVLLNGSLMVALPDSLIVPGQEFIILPLDGWDQPVRPVRLAGRLTC 387 Query: 346 ETGDFI----ALNRKIALPRPGDLLYIEKTGAY 374 ++ DF A + P PG + GAY Sbjct: 388 DSDDFFPRPGAPPLLLPEPYPGQKIAFFGVGAY 420 >gi|322489360|emb|CBZ24619.1| putative ornithine decarboxylase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 717 Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 102/272 (37%), Gaps = 20/272 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY I + + + +A+K+N AV++ L+ LG+G D S+ E+ Sbjct: 267 PFYMIDLGRIVEQMARWRHELPM--VRPYFAVKSNPKPAVMEVLSALGAGFDCASKEEIH 324 Query: 88 RA--LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + I+F+ K ++ A G+ V++ E++ + + S Sbjct: 325 MVLGRHLVASPDDIIFANPCKQFGDLCEAQACGVTYVTVDNPLEMEKIGRLMPSARAIIR 384 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I T+ + KFG P+ + L A + GV H+GS D Sbjct: 385 IT----------TNDSKAQCSFSTKFGAPLEDVEGLLQAARQYNVT-VHGVSFHVGSGND 433 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY-----HSDHRPPSSSDYASLI 260 ++ A + + QQ G N +D+GGG + + ++ Sbjct: 434 DHSAYVSAVRDAYHVFQQAAQYGFNCTLLDIGGGFPGTDIVEGSGNTSFEAIARAIRPIL 493 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 + FG II EPGR+ A L+ V + Sbjct: 494 VELFGGGDVTIISEPGRYFTAASHALLMNVFA 525 Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 22/62 (35%) Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383 R I GP C++ D I R + GD L + G+Y +G +N Sbjct: 622 WDRRRSFPRRPLRITSIFGPTCDSMDCILKKRPFPEMKLGDWLLVPDMGSYTTAAAGVFN 681 Query: 384 SR 385 Sbjct: 682 GF 683 >gi|241573001|ref|XP_002403147.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215500179|gb|EEC09673.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 319 Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 63/332 (18%), Positives = 115/332 (34%), Gaps = 24/332 (7%) Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+K NS+ V++TL G D ++GE++ L V +R+V++ K + A + Sbjct: 1 AVKCNSDPVVLRTLNSQGVNFDCSNKGEIKVVLDMGVTPDRVVYANTVKCTSHLRFAEKH 60 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G+ +SE EL +N + + + + T Sbjct: 61 GVTLMTFDSEEELSKINDKNAR----LLLRIAASEYGSHQTMNAKY---------GSYPH 107 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + G+ I GV H+G E F + R + G ++ +D+G Sbjct: 108 EVEKLMKLAFFKGLNIVGVSFHVGCSFTHTEIFAQTIAEARGVFDSGARIGFSMTLLDIG 167 Query: 238 GGLG--IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 GG + + + + ++ + + KII EPG+F V LVTKVI+ ++ Sbjct: 168 GGFPGGVRKLERFKQVAETIKCAIDEHFPLSSGVKIIGEPGQFFVTSAYTLVTKVIAKRR 227 Query: 296 ---------SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + I + N R + P + + C Sbjct: 228 KDVTIDGVAHRHENIFINESKYNCIPRDLYPFMDITYKPLSPPHDRPREVLTTLWAATCN 287 Query: 347 TGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 D I + + + ++ GAY V Sbjct: 288 PMDCILDKQPFFEVDVDEWMLMDNMGAYTLVL 319 >gi|213027179|ref|ZP_03341626.1| putative amino acid decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 365 Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 79/357 (22%), Positives = 146/357 (40%), Gaps = 30/357 (8%) Query: 32 YSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 +S I +N AF +T +A K S V+K + G + S+ E+R+ L Sbjct: 2 FSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQYEVRKCL 61 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 ++IVF+GV K +++ A+ + +Y NV+S EL+ ++ + L K A + RV Sbjct: 62 EIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVANVCVRV 121 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 P++ + TH ++ T G+ + Q +P V + G+ MH+G Q+ + E F Sbjct: 122 EPNVPSATHAELVTAFHAKS-GLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVPESEPF 180 Query: 211 HKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGL---GIAYHSDHRPPSSSDYASLIHQ---- 262 KA K+L D +++ G I+VGGG+ + P + YA + Q Sbjct: 181 AKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITAQDFAD 240 Query: 263 ------YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM---- 312 + +I +EPGR + +L+T+V K+ + ++ Sbjct: 241 AVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEWKFVDA 300 Query: 313 -----RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI-----ALNRKIAL 359 + + + Y + + GP+C+ GD+ + Sbjct: 301 GYSVLSDSQHFDWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFLLPK 357 >gi|315931022|gb|EFV09997.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp. jejuni 327] Length = 336 Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 99/355 (27%), Gaps = 31/355 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP Y + KN ++ + V ALK + +K + G Sbjct: 4 EKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A ++ + + ++ + S + S ++ + Sbjct: 64 LWEAK---FAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSKTQKNSL 120 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + + + + + + + Sbjct: 121 GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE---------- 170 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 ES +L+ ++ ++ ++ GGG +H + +L Sbjct: 171 -----ESADALEAVLKVFKEKFGKWIGQMKWVNFGGG----HHITKKGYDVEKLIALCKN 221 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + ++ LEPG + G LV V+ I ++ + ++ + + E Sbjct: 222 FSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSE 281 Query: 323 INYIVNPAGDRLHIHAD---------IVGPICETGDFIALNRKIALPRPGDLLYI 368 + A +D + G C GD + + GD ++ Sbjct: 282 VLNARILATRENEKISDLKENEFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKMFF 336 >gi|222524483|ref|YP_002568954.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus sp. Y-400-fl] gi|222448362|gb|ACM52628.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus sp. Y-400-fl] Length = 503 Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 64/400 (16%), Positives = 129/400 (32%), Gaps = 32/400 (8%) Query: 2 SAFKYFEGSLHAEN-VSLEKLAHVVQTPFYCYSTTAIEKNYLTFS--NAFDG------MD 52 ++G L+ + ++L +L P T I A Sbjct: 27 DFVSRYDGDLYFGDRLNLNRLVRQHGAPLEVVYTPQITAQIHRMIGWAAQARAATEYAAP 86 Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL----AAPVPAERIVFSGVGKTI 108 YA KAN ++T G+ + + +L A +P +R++ G Sbjct: 87 FHYAYATKANFAAEAVQTALAAGAHYETSATADLIIAHGLWRQGILPPDRLICC-NGSKE 145 Query: 109 DEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 A++ L L++ + AP+ F V + Sbjct: 146 PAYRNAIRQLRLDGCETVIPVLDDLSELHDLITTPAPLQFGVRERA---AGNRDGRHPGN 202 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 D+FG+ A ++ IGSQI+ F + + +LR Sbjct: 203 DRFGLT-MAEIEQAADLIATTEHRLVLYHAMIGSQIEDEGHFLTTLRASIENYCRLRRRV 261 Query: 229 HNIQHIDVGGGLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVA 281 +++ + GGG+ A + + + + ++I E GR+ VA Sbjct: 262 PTLRYFNFGGGVPTAGYQLTFNFDYQRFLARLMATVRDLCAEYDVPVPELIGEFGRYTVA 321 Query: 282 DVGILVTKVISIK--KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 + +V ++K + + +++ ++ + TL+ + E + R Sbjct: 322 THSAYLVEVGAVKAGQPDQPDWYLINGSLMVMLPDTLFVSGQEFVILPLSDWHRPVRPVR 381 Query: 340 IVG-PICETGDFIALNRK----IALPRPGDLLYIEKTGAY 374 + G C++ D + + G +L I GAY Sbjct: 382 LAGRRTCDSDDIYPRPEQPPLWLPETDGGLVLAIFGIGAY 421 >gi|163846678|ref|YP_001634722.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus aurantiacus J-10-fl] gi|163667967|gb|ABY34333.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus aurantiacus J-10-fl] Length = 500 Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 64/400 (16%), Positives = 129/400 (32%), Gaps = 32/400 (8%) Query: 2 SAFKYFEGSLHAEN-VSLEKLAHVVQTPFYCYSTTAIEKNYLTFS--NAFDG------MD 52 ++G L+ + ++L +L P T I A Sbjct: 24 DFVSRYDGDLYFGDRLNLNRLVRQHGAPLEVVYTPQITAQIHRMIGWAAQARAATEYAAP 83 Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL----AAPVPAERIVFSGVGKTI 108 YA KAN ++T G+ + + +L A +P +R++ G Sbjct: 84 FHYAYATKANFAAEAVQTALAAGAHYETSATADLIIAHGLWRQGILPPDRLICC-NGSKE 142 Query: 109 DEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 A++ L L++ + AP+ F V + Sbjct: 143 PAYRNAIRQLRLDGCETVIPVLDDLSELHDLITTPAPLQFGVRERA---AGNRDGRHPGN 199 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 D+FG+ A ++ IGSQI+ F + + +LR Sbjct: 200 DRFGLT-MAEIEQAADLIATTEHRLVLYHAMIGSQIEDEGHFLTTLRASIENYCRLRRRV 258 Query: 229 HNIQHIDVGGGLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVA 281 +++ + GGG+ A + + + + ++I E GR+ VA Sbjct: 259 PTLRYFNFGGGVPTAGYQLTFNFDYQRFLARLMATVRDLCAEYDVPVPELIGEFGRYTVA 318 Query: 282 DVGILVTKVISIK--KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 + +V ++K + + +++ ++ + TL+ + E + R Sbjct: 319 THSAYLVEVGAVKAGQPDQPDWYLINGSLMVMLPDTLFVSGQEFVILPLSDWHRPVRPVR 378 Query: 340 IVG-PICETGDFIALNRK----IALPRPGDLLYIEKTGAY 374 + G C++ D + + G +L I GAY Sbjct: 379 LAGRRTCDSDDIYPRPEQPPLWLPETDGGLVLAIFGIGAY 418 >gi|12025046|gb|AAG45729.1|AF229440_2 y4yA [Sinorhizobium fredii] Length = 457 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 63/434 (14%), Positives = 119/434 (27%), Gaps = 40/434 (9%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVI 68 L L A +P A+++N ++ + Y K N + ++ Sbjct: 24 LTIHGPLLFDWAARHGSPLNLVWPDALQENLAALKGVLTDCRVEHAIYYGAKVNKSPGLM 83 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + G+GLD+ S ELR A R+V +G KT + Sbjct: 84 QAALSAGAGLDVSSLYELRDARLLGAEGVRLVATGPAKTGAFHQELIDCNALISVDPPGR 143 Query: 129 ---------------------ELKTLNQRAVSLGKKAPIAFRVNPDINA-----NTHKKI 162 + ++ + A + + + + Sbjct: 144 LEDLIHGLPADVGPQPILLRLRPRNQSKSRFGMPADAVVHCLARLAGESRLRFDGLNFHL 203 Query: 163 STGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ 222 S E + + ++ + + Q L + Sbjct: 204 SGYLWETRVAALSEAADLIAEARRMGFSPRMIDIGGGLPIQYVDR--ARYEAHLAAQAPE 261 Query: 223 QLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVAD 282 R+ G L A + + Y + +EPGR L Sbjct: 262 DYRNGKIPDSFYPYGSNLSAADWLHRLLEAEMSQGRSVAGYLAREGLTLAMEPGRALADQ 321 Query: 283 VGILVTKVISIKKSA-DKTFVILDVAMNDFMRPTL---YDAYHEINYIVNPAGDRLHIHA 338 I V + +K D + ++ + + + PA I A Sbjct: 322 AAITVFLISRVKALGPDSHVIFVEGSSFSACETWFASEFLVDPILVPATRPAAQSPPIRA 381 Query: 339 DIVGPICETGDFIALNRKIA---LPRPGDLLYIEKTGAYGAV-QSGTYNSRLLIPEI-MV 393 + G C D ++ NR ++ P GDLL TG Y ++ + + +V Sbjct: 382 YLAGHSCLDEDVLS-NRWLSFPIAPHAGDLLVYANTGGYQMDLLENEFHRHAMPARLCVV 440 Query: 394 NGSQFHIIRPRMTF 407 ++ H I T Sbjct: 441 KDAEGHPILVPDTI 454 >gi|15900104|ref|NP_344708.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae TIGR4] gi|149013610|ref|ZP_01834181.1| pyridoxal-dependent decarboxylase, Orn/Lys/Arg family protein [Streptococcus pneumoniae SP19-BS75] gi|14971633|gb|AAK74348.1| pyridoxal-dependent decarboxylase, Orn/Lys/Arg family [Streptococcus pneumoniae TIGR4] gi|147762801|gb|EDK69756.1| pyridoxal-dependent decarboxylase, Orn/Lys/Arg family protein [Streptococcus pneumoniae SP19-BS75] gi|301793450|emb|CBW35823.1| Pyridoxal dependent decarboxylase [Streptococcus pneumoniae INV104] Length = 368 Score = 85.3 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 112/356 (31%), Gaps = 31/356 (8%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFD-GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 +P Y +E F N + + YA+KANSN+ +++ L G+D+ S E Sbjct: 24 SPCVVYDFGLLETVLDEFKNQIPVTFNYQLFYAVKANSNEKILEFLVDKIDGVDVASLSE 83 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L A P +I +G + + + Y + + K Sbjct: 84 LDVAKK-FFPPTQISVNGPAFSYETL--------YNLIKKQYKVDINFLEHLQQFSPKES 134 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + RV + + +FGI I + T +H Sbjct: 135 VGIRVT--------EPDELNNRMSRFGINICSDN------WTSNLQNPLITRLHFHFGEK 180 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + K K+L L + + ++ I++GGG + + + +Y Sbjct: 181 DDKFIVKLDKILFKLQEINKLR--EVREINLGGGFMKLFMENRLKEFFLSLMEIYKKYDI 238 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + I+EPG + + ++T +++ + ++ + LD ++ + Sbjct: 239 DSTVTTIIEPGSAITSFSAYMITSPVNVSEVNEQQVITLDTSIYTNT-----LWFVPHII 293 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + + + G C D + + + GAY Sbjct: 294 TTLNSSSKERYSTILYGNTCYEHDKYKMKVSLPRLTQNSSIVFFPVGAYIKSNHSN 349 >gi|213423763|ref|ZP_03356743.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 257 Score = 85.3 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 104/264 (39%), Gaps = 14/264 (5%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 54 KACSNIHILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++ + + + + + RVNP +K +TG + K GI + Sbjct: 113 SELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ K + I I + ++ + +Q+ G +++ I GGG Sbjct: 173 -----AALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQY 263 L I YH P + Y L + Sbjct: 228 LSIPYHEGEEPVDTRHYYGLWNAA 251 >gi|213646737|ref|ZP_03376790.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 259 Score = 85.3 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 64/271 (23%), Positives = 105/271 (38%), Gaps = 14/271 (5%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 54 KACSNIHILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 ++ + + + + + RVNP +K +TG + K GI + Sbjct: 113 SELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLP 172 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 A+ K + I I + ++ + +Q+ G +++ I GGG Sbjct: 173 -----AALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGG 227 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCK 270 L I YH P + Y L + + Sbjct: 228 LSIPYHEGEEPVDTRHYYGLWNAAREQIARH 258 >gi|260829307|ref|XP_002609603.1| hypothetical protein BRAFLDRAFT_87824 [Branchiostoma floridae] gi|229294965|gb|EEN65613.1| hypothetical protein BRAFLDRAFT_87824 [Branchiostoma floridae] Length = 259 Score = 85.3 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 33/97 (34%) Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 S+ + + + D F A + + + + + GP C+ D I Sbjct: 152 SMCEEPAFMYYVNDGVYGSFNCLLYDHAAVTPSLMRDVDKEEALFSTSVWGPTCDGLDRI 211 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + + + GD + E GAY + T+N Sbjct: 212 MEHCLLPELQVGDWILFEDMGAYTMAAASTFNGFSKP 248 >gi|17548900|ref|NP_522240.1| putative diaminopimelate decarboxylase protein [Ralstonia solanacearum GMI1000] gi|17431150|emb|CAD17830.1| putative orn/dap/arg decarboxylase 2; protein [Ralstonia solanacearum GMI1000] Length = 428 Score = 85.3 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 59/407 (14%), Positives = 116/407 (28%), Gaps = 37/407 (9%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-------TMVCYALKANSN 64 L + TP + YS + +N +A + + N+N Sbjct: 23 WIARADLPSICSQTGTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFP---NAN 79 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 ++K L G+G+ + E + G +E Y + Sbjct: 80 PHILKPLRDEGAGILLQMPNEYKLITQYGFS---DFIVSPGHVSNEEIAFWSKKDYPVFL 136 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 S E+ + + + K K L A Sbjct: 137 ASLDEIAYAIREHAPTISVRIDSLGSD--------------KPGIKVDQLGDLAKLLSAN 182 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 +L ++ + + I + F++ D RS H A Sbjct: 183 GRSLECFEVYCGSGNSLQGMIDI--ARQIFRMYLDHFPTARSINFAGGHGFDYEKWSEAE 240 Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV-ISIKKSADKTFVI 303 L + + + EPGR ++AD G+L+T + I + + V+ Sbjct: 241 KHFDWATYFQAIRDLATEMKIPETVRFLFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVV 300 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV----GPICETGDFIA-LNRKIA 358 D + L + H ++ + + V G D+I + Sbjct: 301 TDGSRMLMPSAQLRNRAHHTVFLDAAFNEVVDYSRRCVAKVRGRSILRNDYILPGDVVAP 360 Query: 359 L-PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRP 403 + G+ + I GAY A Q + + E++V +++ Sbjct: 361 ETVKAGEYMLILDVGAYCATQHMEFLNVPPAGEVLVEADGAIYMVTK 407 >gi|90409168|ref|ZP_01217284.1| putative carboxynorspermidine decarboxylase [Psychromonas sp. CNPT3] gi|90309728|gb|EAS37897.1| putative carboxynorspermidine decarboxylase [Psychromonas sp. CNPT3] Length = 376 Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 51/385 (13%), Positives = 117/385 (30%), Gaps = 26/385 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP++ + + +N + + ALK S +T+ G E+ Sbjct: 10 TPYFMIDESKLIENLEKAKRLKEISGVKLVLALKCFSTFGTFETIKPYLDGTTSSGPYEV 69 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + E ++ +++ + + + L L+ + + A + Sbjct: 70 KLGY------ETFGGETHAYSVGYSKNDIENVKHMADKIIFNSLSQLDAHYDNTKQSASL 123 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+NP+ + + + G+ S L VD + + Sbjct: 124 GLRINPERSQAGQDLADPARPYSRLGV----------KQSLLDLSVTDKVDGFMFHMNCE 173 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + +L ++ ++ + +GGG+ + + + Sbjct: 174 NKDVDAFIAILDHISTTFSEYLDKLKWLSLGGGI----FFTYPNYPIEKLGMALKNFAQK 229 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 Q ++ LEPG ++ LV VI I ++ KT ++ + +Y+ Sbjct: 230 HQLQLYLEPGEAIITRTTDLVVSVIDIVENDKKTAIVDSATEAHRLDTLIYN----EPAS 285 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 V A I C GD + A + G L++ + Y V+ +N Sbjct: 286 VKEASANGIYPYVIGSCSCLAGDQFCETQFDAPLQIGQKLHLLDSAGYTMVKLNWFNGLK 345 Query: 387 LIPEIMVN-GSQFHIIRPRMTFQEL 410 + + ++ + Sbjct: 346 MPSIYFKRVDGSIETLNS-FSYDDF 369 >gi|326435712|gb|EGD81282.1| ornithine decarboxylase [Salpingoeca sp. ATCC 50818] Length = 648 Score = 84.9 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 66/318 (20%), Positives = 112/318 (35%), Gaps = 21/318 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I + T+ ++ YA+K NS+ ++K LA L G D S E++ Sbjct: 41 FFLTDLHDIWCKHRTWQAMLPRIEP--FYAIKCNSDPVILKALAALNLGFDCASAKEIQA 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V +RI+F+ K + + A + G+ ++E+EL + S + Sbjct: 99 MLDLGVAPDRIIFANPCKALSHLLYAKEKGVKLMTFDNENELLKCAEHFPSARLVLRVL- 157 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + + K+G L A TL + + GV H+GS Sbjct: 158 ---------ADDSKAVCRLGLKYGARPSCTLRLLQLARTL-HLNVVGVSFHVGSGSTDAS 207 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS---SSDYASLIHQYFG 265 +F A R + Q S G +DVGGG ++ S ++ + Sbjct: 208 AFADAVYRARAVFDQALSLGFRPTLLDVGGGFPGTTYTSAISFDAIASCLTRAVDECFPP 267 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + ++I EPGRF VA L VI +T + N+ R + + Sbjct: 268 SCGVRVIAEPGRFYVASACCLAVSVI-----GKRTPHEVAGDHNNNNRRAIDTTGNGHGS 322 Query: 326 IVNPAGDRLHIHADIVGP 343 + G Sbjct: 323 SARCHDVPAAAPRVVGGC 340 Score = 82.9 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 22/56 (39%) Query: 333 RLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + I GP C++ D I + GD L+ GAY + + T+N Sbjct: 526 APPLTCSIWGPTCDSMDCIEKRASLPELEVGDWLFYPDMGAYTSCAASTFNGFDKP 581 >gi|207724408|ref|YP_002254805.1| orn/dap/arg decarboxylase 2; protein [Ralstonia solanacearum MolK2] gi|206589629|emb|CAQ36590.1| orn/dap/arg decarboxylase 2; protein [Ralstonia solanacearum MolK2] Length = 428 Score = 84.5 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 56/402 (13%), Positives = 112/402 (27%), Gaps = 37/402 (9%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-------TMVCYALKANSNQAVIK 69 L + TP + YS + +N +A + + N+N ++K Sbjct: 28 DLPSICAQTGTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFP---NANPHILK 84 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 L G+G+ + E + G +E Y + S E Sbjct: 85 PLRDEGAGILLQMPNEYKLITQYGFS---DFIVSPGHVSNEEIAFWSQKHYPVFLASLDE 141 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + + K K L A +L Sbjct: 142 IAYAVRENAPTISVRIDSLGSD--------------KPGIKVDQLGSLAQMLSASGRSLE 187 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 ++ + + I + F++ D RS H + Sbjct: 188 CFEVYCGSGNSLQGMIDI--ARQIFRMYLDHFPTARSINFAGGHGFNYEKWSESEKHFDW 245 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 L + K + EPGR ++AD G+L+T + +++ Sbjct: 246 TTYFQAIRDLATEMKIPETVKFMFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSR 305 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHAD-----IVGPICETGDFI--ALNRKIALPRP 362 M ++ A + + ++ I G D+I + Sbjct: 306 MLMPSAQLRNRSHNTVFLDSAFNEIVDYSRRCNAKIRGRSILRNDYILPGEVVAPETIKA 365 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRP 403 G+ + I GAY A Q + + E++V +++ Sbjct: 366 GEYMLILDVGAYCATQHMEFLNVPPAGEVLVEADGTIYMVTK 407 >gi|227832186|ref|YP_002833893.1| putative diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC 700975] gi|262183962|ref|ZP_06043383.1| putative diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC 700975] gi|227453202|gb|ACP31955.1| putative diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC 700975] Length = 462 Score = 84.5 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 75/405 (18%), Positives = 135/405 (33%), Gaps = 42/405 (10%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAV 67 L A+ + +L +P + +N +A G+DT V +A KAN Sbjct: 26 ELVADPQQVSRLTSEYGSPVNVLHPAPLGRNAQELLDAGASHGVDTQVFFARKANKALCF 85 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 + G G+D+ SE ELR+ L V ERI+ S KT + LA+ G + +S Sbjct: 86 VDAAREAGLGVDVASENELRQVLNRGVAPERIILSAAIKTDALLRLAIDRG-VTISCDSR 144 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 +E + + A +L A +A R+ P+ + + + IH+ + Sbjct: 145 AEAERIAALAKALNHTAHVAPRLAPNPDNLPPTRFGELLHAWQSHAWPETIHADGVHVHL 204 Query: 188 LPGVK-------------------ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN- 227 + + I S+ ++ + +++ + Sbjct: 205 HGYSESDRRTALAEAIALIEHLRLVGQPASFIDIGGGVPMSYLESREQWEYFQERIAAQR 264 Query: 228 -----GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG------NLQCKIILEPG 276 + + + + + + + LEPG Sbjct: 265 AGTGEPFTWKSDPLSNTYPFWQTPTRGEWLNHLLSGEVAGFGPAGRALSERNISLHLEPG 324 Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE----INYIVNPAGD 332 R L+ GI++ +V +K+ +D +I R D + A D Sbjct: 325 RSLLDGCGIILAEVSFLKERSDGLPLIGAAMNRTQCRTAADDILLDPLLVPTAGERGAVD 384 Query: 333 RLHIHADIVGPICETGDFIALNRKIALPR---PGDLLYIEKTGAY 374 R +VG C D + L R++ P GD L I T Y Sbjct: 385 REPRTGFVVGAYCIE-DEVILRRELDFPEGIAVGDTLAIPNTAGY 428 >gi|83747325|ref|ZP_00944366.1| Hypothetical Protein RRSL_02271 [Ralstonia solanacearum UW551] gi|83726025|gb|EAP73162.1| Hypothetical Protein RRSL_02271 [Ralstonia solanacearum UW551] Length = 428 Score = 84.5 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 58/402 (14%), Positives = 112/402 (27%), Gaps = 37/402 (9%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-------TMVCYALKANSNQAVIK 69 L + TP + YS + +N +A + + N+N ++K Sbjct: 28 DLPSICAQTGTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFP---NANPHILK 84 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 L G+G+ + E + G +E Y + S E Sbjct: 85 PLRDEGAGILLQMPNEYKLITQYGFS---DFIVSPGHVSNEEIAFWSQKHYPVFLASLDE 141 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + + K K L A +L Sbjct: 142 IAYAVRENAPTISVRIDSLGSD--------------KPGIKVDQLGSLAQMLSASGRSLE 187 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 ++ + + I + F++ D RS H + Sbjct: 188 CFEVYCGSGNSLQGMIDI--ARQIFRMYLDHFPTARSINFAGGHGFNYEKWSESEKRFDW 245 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVT-----KVISIKKSADKTFVIL 304 L + K + EPGR ++AD G+L+T V + T Sbjct: 246 TTYFQAIRDLATEMKIPETVKFMFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSR 305 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI--ALNRKIALPRP 362 + + +R ++ + +A I G D+I + Sbjct: 306 MLMPSAQLRNRSHNTVFLDSAFNEIVDYSKRCNAKIRGRSILRNDYILPGEVVAPETIKA 365 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRP 403 G+ + I GAY A Q + + E++V +++ Sbjct: 366 GEYMLILDVGAYCATQHMEFLNVPPAGEVLVEADGTIYMVTK 407 >gi|22203509|gb|AAM92262.1| ornithine decarboxylase [Zea mays] Length = 339 Score = 84.5 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 100/292 (34%), Gaps = 13/292 (4%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + ++ A + YA+K N + + LA +GS D S E+ Sbjct: 58 PFYVLDLGEVVSLMDQWNVALP--NVRPFYAVKCNPEPSFLSMLAAMGSNFDCASRAEIE 115 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + ERIVF+ K +I A + G+ +SE E+ + + I Sbjct: 116 YVLSLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPKCELLLRI- 174 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + + + + + +SGV H GS Sbjct: 175 ---------KPMNDGNARCPMGPKYGALPEEIEPLLRIAQASRLTVSGVSFHNGSGDADS 225 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 ++ A + + + G + ++ GG + H ++ A H + Sbjct: 226 NAYLGAIAAAKQVFETAAKFGMSKINVLDIGGGFTSGHQFTTAATAVKSALQQH-FSNEP 284 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + II EPGRF L T +I + D ++ + M LYD Sbjct: 285 ELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYWINDGLYGSMNCVLYDN 336 >gi|237750793|ref|ZP_04581273.1| LOW QUALITY PROTEIN: carboxynorspermidine decarboxylase NspC [Helicobacter bilis ATCC 43879] gi|229373238|gb|EEO23629.1| LOW QUALITY PROTEIN: carboxynorspermidine decarboxylase NspC [Helicobacter bilis ATCC 43879] Length = 301 Score = 84.5 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 64/222 (28%), Gaps = 14/222 (6%) Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + + + L + + + ++ GGG I + Sbjct: 73 FKAHFSGLHFHTHCEQDSSALQRTLPHVIGHFGDYLSHCEWVNFGGGHHITRSDYNCTLL 132 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 + +++LEPG + G L+ +V+ I ++ ++ A Sbjct: 133 VNLI---KDFREKYNGIQVMLEPGEAVGWQTGDLIGEVVDIVENEGLVAILDVSASCHMP 189 Query: 313 RPTLYDAYHEINYIVNPAG-----------DRLHIHADIVGPICETGDFIALNRKIALPR 361 I + ++ GP C GD I + Sbjct: 190 DCLEMPYRPACYKITKDSKGNAVIESDLGEEKGKYCYRFGGPTCLAGDVIGDYSFDMPLK 249 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 GD + Y V++ T+N L +V +F +++ Sbjct: 250 VGDKIAFVDMIHYTIVKNTTFNGVELPSLGVVENGKFKLLKQ 291 >gi|227112172|ref|ZP_03825828.1| putative lysine/ornithine decarboxylase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 467 Score = 84.5 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 67/422 (15%), Positives = 119/422 (28%), Gaps = 38/422 (9%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT--MVCYALKANSNQAVIKTLAHL 74 L L +P + N D + Y K N + +++ + Sbjct: 42 RLSWLVEQYGSPLNIVWPHTVANNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNA 101 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G G+D+ S EL+ AL A R+ +G KT + + + E + L Sbjct: 102 GVGVDVSSLQELKDALRAGGDGARLCATGPAKTREFLTALVHHRALIVLDSPEEFDEVLA 161 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF-------GIPIHQIHSLYAYAST 187 + A + + +H + Sbjct: 162 LADLLRVTDPVRVLLRYRPSFAQASRFGMLADEVAICLEALSTRQAVLHLEGFHFHLGGY 221 Query: 188 LPGVKISGVDMH----------------IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 P +++ I + A + L +Q ++ + Sbjct: 222 EPDTRVAAFAEVLPLLERARSKGLQPAIIDIGGGLPIQYLSASRYQDYLAKQNAADYRHG 281 Query: 232 QH---IDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVT 288 Q GG A S+S + + + +EPGR L I V Sbjct: 282 QVPTSFYPYGGERSAVDYLEAFLSASIGQNRVADVLKQHGLILAIEPGRSLADQSAITVF 341 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYD----AYHEINYIVNPAGDRLHIHADIVGPI 344 +V ++ D V+ + T ++ + V + A I G Sbjct: 342 RVTRTRRQPDGNHVVFVEGSSFSACETWFNSEFLIDPLHVFSVKKDTPLVPGKAWIAGHS 401 Query: 345 CETGDFIALNRKIA---LPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEI-MVNGSQFH 399 C D I NR I +P+ GDLL T Y ++ L + G + Sbjct: 402 CLDDDVIT-NRLIHFRTVPQSGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGE 460 Query: 400 II 401 +I Sbjct: 461 LI 462 >gi|110637980|ref|YP_678187.1| arginine decarboxylase, biosynthetic [Cytophaga hutchinsonii ATCC 33406] gi|110280661|gb|ABG58847.1| arginine decarboxylase, biosynthetic [Cytophaga hutchinsonii ATCC 33406] Length = 430 Score = 84.5 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 49/403 (12%), Positives = 101/403 (25%), Gaps = 27/403 (6%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTL 71 + + TP I F CY K++ V+ Sbjct: 2 DVINKYGTPLKLSYLPKISSQIQKAKQWFGEAITNNNYSGTYTYCYCTKSSHFSFVLNEA 61 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 ++ S ++ + + V + N Sbjct: 62 LKNDIHIETSSAYDIPIVRILFENNKITKATNVICNGYKRPEYTDYICDLINEGFNC-TP 120 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI-HSLYAYASTLPG 190 L+ + I N I T ++ + G + + P Sbjct: 121 ILDNLDEITAYEKGIETSCNLGIRLATDEEPKFEFYTSRLGFRYNDVVQFYKEKIEPNPK 180 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 K+ + I + I + + ++ ++ ID+GGG I Sbjct: 181 FKLKMLHFFINTGIKDTTYYWSELSRFVHMYCTMKKINPDMDSIDIGGGWPIKTSVHFEY 240 Query: 251 PSSSDYASLIHQYFGNLQ------CKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 ++ I E G F V + G V V+ K DK + Sbjct: 241 DYKYMADQIVKTIKKVCDEEGVPTPNIFTEFGSFTVGESGAAVYSVLGSKLQNDKEEWYM 300 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN-----RKIAL 359 + P ++ + + D+ + + G C++ D+ + Sbjct: 301 IDSSFITTLPDVWGLSQKYLLLAVNGWDKPYKKVKLGGITCDSMDYYNSEAHQNLVFMPE 360 Query: 360 PRPGD--LLYIEKTGAYGAVQSG----TYNSRLLIPEIMVNGS 396 + + TGAY G + I+++ Sbjct: 361 LDEKEPTYIGFFHTGAYQESLGGYGGIQHCLVPAPKHILIDKD 403 >gi|227818599|ref|YP_002822570.1| LysA, diaminopimelate decarboxylase LysA [Sinorhizobium fredii NGR234] gi|36958854|gb|AAQ87279.1| Y4yA [Sinorhizobium fredii NGR234] gi|227337598|gb|ACP21817.1| putative LysA, diaminopimelate decarboxylase LysA [Sinorhizobium fredii NGR234] Length = 457 Score = 84.1 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 64/422 (15%), Positives = 117/422 (27%), Gaps = 39/422 (9%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVI 68 L L +P A++KN + V Y +K N + ++ Sbjct: 24 LTRHGPLLLDWVTCYGSPLNLVWPDALQKNLAALKGVLTERRVGHAVYYGVKVNKSLGLM 83 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS----------- 117 + G+GLD+ S ELR A R+V +G KT + Sbjct: 84 RAALSAGAGLDVSSLCELRDARRLGAEGVRLVATGPAKTSAFHKELIDCSALISVDSPEE 143 Query: 118 ----------GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN-----ANTHKKI 162 + + ++ + A + H + Sbjct: 144 LEDLIDGLPADAGPQPILLRLRPRDQSKSRFGMPGDAVVHCLARLTAENRLRFDGLHFHL 203 Query: 163 STGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ 222 S + E + + ++ + + Q + L + Sbjct: 204 SGYRWETRVAALSEAADLITKARRMGFSPRMIDIGGGLPIQYVDQVKYR--AHLAAQAPE 261 Query: 223 QLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVAD 282 R+ GG L A + + Y + +EPGR L Sbjct: 262 DYRTGKIPDSFYPYGGTLSPADWLHRLLEAEMSQGQSVAGYLAREGLTLAMEPGRALTDQ 321 Query: 283 VGILVTKVISIKKSA-DKTFVILDVAMNDFMRPTL---YDAYHEINYIVNPAGDRLHIHA 338 I V ++ +K D + ++ + + + + PA I A Sbjct: 322 AAITVFRISRVKALGPDSHVIFVEGSSFSACETWFASEFLVDPILVPVTRPAAQSPPIRA 381 Query: 339 DIVGPICETGDFIALNRKIA---LPRPGDLLYIEKTGAYGAV-QSGTYNSRLLIPEIMVN 394 + G C D I+ NR + P+ GDLL TG Y ++ + + V Sbjct: 382 YLAGHSCLDEDVIS-NRWLTFPIAPQAGDLLVYANTGGYQMDLLENEFHRHPMPARLCVI 440 Query: 395 GS 396 Sbjct: 441 DD 442 >gi|45269005|gb|AAS55915.1| ornithine decarboxylase [Sus scrofa] Length = 152 Score = 84.1 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 32/95 (33%) Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + + D F A+ + P D + + I GP C+ D I ++ Sbjct: 5 FMYYVNDGVYGSFNCILYDHAHVQPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCRLP 64 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 GD + E GAY + T+N V Sbjct: 65 EMHVGDWMLFENMGAYTVAAASTFNGFQRPAIYYV 99 >gi|119627879|gb|EAX07474.1| arginine decarboxylase, isoform CRA_f [Homo sapiens] Length = 483 Score = 84.1 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 48/371 (12%), Positives = 97/371 (26%), Gaps = 75/371 (20%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ AI + + F YA+K NS+ V+K LA L Sbjct: 109 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQ------------LGL 154 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + AE + +G +I A + L + + Sbjct: 155 GFSCANKAEMELVQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKS 214 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + + + + + Sbjct: 215 HPSANFHIGS--------------------------------------------GCPDPQ 230 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGN 266 ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 231 AYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEG 290 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDF 311 I E GR+ V + +I+ K S + + + F Sbjct: 291 CGVDIFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIF 350 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKT 371 + P+ ++ + + GP + D +A + GD L + Sbjct: 351 NSVLFDNICPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNM 410 Query: 372 GAYGAVQSGTY 382 GAY + Sbjct: 411 GAYTVGMGSPF 421 >gi|90085118|dbj|BAE91300.1| unnamed protein product [Macaca fascicularis] Length = 358 Score = 84.1 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 64/333 (19%), Positives = 107/333 (32%), Gaps = 28/333 (8%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K +S AV++ LA LG+G S+ E+ Sbjct: 35 FFVGDLGKIVKKHSQWQNVVAQIKP--FYTVKCSSAPAVLEILAALGTGFACSSKNEMAL 92 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 V E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 93 VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIA- 151 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L V+I GV H+ S + + Sbjct: 152 ---------TEDNIGGEEGNMKFGTTLKNCKHLLECAKELD-VQIIGVKFHVSSACKESQ 201 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQY 263 + A R + G + +D+GGG + P Y Sbjct: 202 VYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGV 261 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMR 313 + F +A I V + K + + + D F Sbjct: 262 KIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFAS 321 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 D D + + GP C+ Sbjct: 322 KLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCD 354 >gi|156324878|ref|XP_001618506.1| hypothetical protein NEMVEDRAFT_v1g3350 [Nematostella vectensis] gi|156199145|gb|EDO26406.1| predicted protein [Nematostella vectensis] Length = 254 Score = 83.7 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 24/252 (9%) Query: 1 MSAFKYFEGSLHA--ENVSLEKLAHVV---------QTPFYCYSTTAIEKNYLTFSNAFD 49 M++F + E + + FY I K ++ + A Sbjct: 1 MNSFSNDDFDFSFLEEGFCARDIVEQKINEVSLSDDKDAFYVADLGDIVKKHVRWFKALP 60 Query: 50 GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 YA+K N ++A++KTL+ LG+G D S+ E++ + V +ERI+++ K + Sbjct: 61 R--VTPFYAVKCNDSKAIVKTLSLLGAGFDCASKTEIQLVQSIGVSSERIIYANPCKQVS 118 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 +I A G+ +SE EL + + + IA T + + Sbjct: 119 QIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIA----------TDDSKAVCRLSV 168 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 KFG + L A L V I GV H+GS +++ +A R + G Sbjct: 169 KFGATLKTSRLLLERAKEL-NVDIIGVSFHVGSGCTDPQTYVQAVSDARCVFDMGAELGF 227 Query: 230 NIQHIDVGGGLG 241 N+ +D+GGG Sbjct: 228 NMHLLDIGGGFP 239 >gi|114621182|ref|XP_001154571.1| PREDICTED: ornithine decarboxylase antizyme inhibitor isoform 1 [Pan troglodytes] Length = 390 Score = 83.7 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 62/350 (17%), Positives = 107/350 (30%), Gaps = 30/350 (8%) Query: 61 ANSNQAVIKTLAHLGSGLDIV----SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 AN + ++ +LG+ +D + E+ VP E I++ K + +I A + Sbjct: 8 ANYSVGLLDEGTNLGNVIDNYVYEHTLNEMALVQELGVPPENIIYISPCKQVSQIKYAAK 67 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 G+ ++E ELK + + + IA T I + KFG + Sbjct: 68 VGVNILTCDNEIELKKIARNHPNAKVLLHIA----------TEDNIGGEEGNMKFGTTLK 117 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 L A L +I GV H+ S + + + A R + G + +D+ Sbjct: 118 NCRHLLECAKELDV-QIIGVKFHVSSACKESQVYVHALSDARCVFDMAGEIGFTMNMLDI 176 Query: 237 GGGLGIAYH-----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 GGG + P Y + F +A I V Sbjct: 177 GGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYVSSAFTLAVNIIAKKVVE 236 Query: 292 SIKKSAD----------KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + K + + + D F D D + + Sbjct: 237 NDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPEVHKKYKEDEPLFTSSLW 296 Query: 342 GPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 GP C+ D I + + GD L + GA + +N Sbjct: 297 GPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFNDFQRPAIY 346 >gi|333015578|gb|EGK34917.1| diaminopimelate decarboxylase domain protein [Shigella flexneri K-227] Length = 176 Score = 83.7 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 65/175 (37%), Gaps = 10/175 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + F+ +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FE----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLECVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK--EDKFGIPIHQIHS 180 + + + + + RVNP +K K G PI H Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKPIPVAKTASTVSGTPICPPHW 175 >gi|147772643|emb|CAN73820.1| hypothetical protein VITISV_034956 [Vitis vinifera] Length = 167 Score = 83.3 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 39/69 (56%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY YS I +N+ + A +G+ ++ YA+KAN+N +++ L LG G +VS ELR Sbjct: 2 PFYLYSKPQITRNFEAYKEALEGLRLIIGYAVKANNNLKILEHLRELGCGAVLVSGNELR 61 Query: 88 RALAAPVPA 96 A A Sbjct: 62 FAFRAGFDP 70 Score = 69.9 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 32/51 (62%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 PFY YS I +N+ + A +G+ +++ YA+KAN+N +++ L LG G Sbjct: 102 PFYLYSKPQITRNFEAYKEALEGLRSIIGYAIKANNNLKILEHLKELGCGA 152 >gi|312972941|ref|ZP_07787114.1| diaminopimelate decarboxylase domain protein [Escherichia coli 1827-70] gi|310332883|gb|EFQ00097.1| diaminopimelate decarboxylase domain protein [Escherichia coli 1827-70] Length = 176 Score = 83.3 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 65/175 (37%), Gaps = 10/175 (5%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67 + L AEN L +L P + Y I + FD +V +A KA SN + Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK--EDKFGIPIHQIHS 180 + + + + + RVNP +K K G PI H Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKPIPVAKTASTVSGTPICPPHW 175 >gi|219848681|ref|YP_002463114.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus aggregans DSM 9485] gi|219542940|gb|ACL24678.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus aggregans DSM 9485] Length = 505 Score = 83.3 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 61/400 (15%), Positives = 128/400 (32%), Gaps = 32/400 (8%) Query: 2 SAFKYFEGSLHAEN-VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-------- 52 ++G L+ + ++L +L P T I N Sbjct: 27 DFVSRYDGELYFGDRLNLNRLVRQHGAPLEVVYTPQITMQVQRMLNWAAQARIATEYPAA 86 Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL----AAPVPAERIVFSGVGKTI 108 YA KAN ++T G+ + + +L A +P +R +F K Sbjct: 87 FHYAYATKANFAAEAVQTALAAGAHYETSATADLIIAHGLWRQGILPRDRFIFCNGSKEP 146 Query: 109 DEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 + + + P+ + A + Sbjct: 147 AYREAIRNIRLDGCETVIPVLDDLTE---LRDLLDTPVTLQFGVRERAAG-NRDGRHPGN 202 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 D+FG+ +I A T + +GSQI+ + F + + +LR Sbjct: 203 DRFGLTADEIE-QAADLITDTHHTLVLYHAMVGSQIEDEDHFLNTLRASVEHYCRLRRRV 261 Query: 229 HNIQHIDVGGGLGIAYHSDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVA 281 +++ + GGG+ A + + + + ++I E GR+ VA Sbjct: 262 STLRYFNFGGGMPTAGYQLTFSFDYRRFLSRLMITVRDLCAEYDVPTPELIGEFGRYTVA 321 Query: 282 DVGILVTKVISIK--KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 + +V ++K ++ + +++ ++ + TL+ + E + D+ Sbjct: 322 THSAYLVEVGAVKAGQAGQPDWYLVNGSLMVMLPDTLFVSGQEFVILPLTDWDKPVRPVR 381 Query: 340 IVG-PICETGDFIALNRK----IALPRPGDLLYIEKTGAY 374 + G C++ D + + G +L I GAY Sbjct: 382 LAGRRTCDSDDIYPRPEQPPLWLPTTDGGLILAIFGIGAY 421 >gi|88601108|gb|ABD46552.1| aspartokinase-like protein [Acanthamoeba castellanii] Length = 180 Score = 83.3 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 3/122 (2%) Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 N + + LEPGRF +A+ G+L+ V +K ++ +D N +RP LY A+ Sbjct: 59 EFKQKNPEFSLWLEPGRFPIAEAGVLLCTVTQLKSKGSYNYIGVDTGFNSLIRPILYAAH 118 Query: 321 HEINYIVNPAGDR--LHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAV 377 H+I + I A+IVG ICE+GD R + + GD++ I GAYG Sbjct: 119 HQIVNLSRLHSTPGGPSITAEIVGNICESGDVFGHARTMPADTQEGDIVLIATAGAYGHS 178 Query: 378 QS 379 + Sbjct: 179 MA 180 >gi|329935163|ref|ZP_08285154.1| lysine/ornithine decarboxylase [Streptomyces griseoaurantiacus M045] gi|329305232|gb|EGG49090.1| lysine/ornithine decarboxylase [Streptomyces griseoaurantiacus M045] Length = 455 Score = 83.3 bits (204), Expect = 8e-14, Method: Composition-based stats. Identities = 81/443 (18%), Positives = 130/443 (29%), Gaps = 71/443 (16%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLGSG 77 +L++ + PF+ + N F G++ V YA KAN + A G G Sbjct: 37 ELSYALGGPFHLLLPERFDANAAAFEGVLHEAGVEGRVYYAKKANKAAVWMDRCALSGRG 96 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 +D+ GELR AL V E +V +G K D + +A+ G EL+ + +A Sbjct: 97 VDVAGAGELRDALGHGVRGEHLVVTGPAKAGDLLRVAVLQGCLIAVDAL-DELENVLAQA 155 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + A + R + G + + A A V+ Sbjct: 156 RTAARPARVLLRRL--------PPAQPHSRFGLDGGELKTALARCAQARDAVVVEGFSFH 207 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP------- 250 + A L +L + R+ GH I +GGG + Y Sbjct: 208 LS----GYDPSLRASAAGELVELCLKARAMGHRADRISIGGGFAVDYTDAGHWEAFLREQ 263 Query: 251 -PSSSDYASLIHQYFGNLQCKI---------------------------ILEPGRFLVAD 282 P +LEPGR L+ Sbjct: 264 RPEHYHAGRSFDPADFYPYHSPVAGAAALRAVLAADGLAGRLREAGVQLLLEPGRALLDR 323 Query: 283 VGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY-IVNPAGDRLHIHADIV 341 G V +V +K V +D + Y + A + Sbjct: 324 AGCTVFRVQGVKDRDGYGIVTVDGSSLSLSEQWFDSEYLPDPVLLPRHEPHGEPYAACVG 383 Query: 342 GPICETGDFIALN--RKIALPRPGDLLYIEKTGAYGAVQSGT---YNSRLLIPEIMVN-- 394 G C D ++ R P DLL T Y ++ L P+++++ Sbjct: 384 GATCLESDMVSWRKVRFPRRPAADDLLVYPNTAGYQ--MDSNESPFHELPLPPKVVLDIA 441 Query: 395 GSQFHIIRPRMTFQELIELDSIP 417 G LD P Sbjct: 442 GGTTR-----------WRLDRPP 453 >gi|167916301|ref|ZP_02503392.1| hypothetical protein Bpse112_37852 [Burkholderia pseudomallei 112] Length = 159 Score = 82.9 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 5/142 (3%) Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT- 315 A +I+LE GR+LV++ GI V V+ K S F+++D M+ + + Sbjct: 18 ALCADAARALPDAEIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASG 77 Query: 316 ---LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + + N ++VGP+C D IA +A RPGDLL + ++G Sbjct: 78 NLGQLIRRNYPVVVGNRVVGDERERVNVVGPLCTPLDIIAHQATLATARPGDLLVVFQSG 137 Query: 373 AYGAVQSGT-YNSRLLIPEIMV 393 AYG S + S+ E++V Sbjct: 138 AYGLTASPNGFLSQPAAREVIV 159 >gi|218296856|ref|ZP_03497551.1| diaminopimelate decarboxylase [Thermus aquaticus Y51MC23] gi|218242736|gb|EED09271.1| diaminopimelate decarboxylase [Thermus aquaticus Y51MC23] Length = 133 Score = 82.9 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 4/88 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L + A TPFY Y TAI+K F AF +ALKAN +++ +G Sbjct: 9 ALREAARAYPTPFYAYDWTAIKKRAEAFREAFPL--ARPFFALKANPRLGLLR--RPMGY 64 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGV 104 G + VS GE+ RA A E +V++G Sbjct: 65 GAEAVSLGEVLRAYRAGFSPEEVVWNGP 92 >gi|32473071|ref|NP_866065.1| diaminopimelate decarboxylase [Rhodopirellula baltica SH 1] gi|32397750|emb|CAD73751.1| probable diaminopimelate decarboxylase [Rhodopirellula baltica SH 1] Length = 555 Score = 82.6 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 75/416 (18%), Positives = 133/416 (31%), Gaps = 61/416 (14%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHL 74 +L L +P + +N + G+D V +A KAN + Sbjct: 108 NLFDLVETYGSPLNLVRPRTMRRNVEELNAVARERGLDFRVFFARKANKCLGFVDEAIES 167 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+D SE ELR+ L VPA+ ++ + K+ ID C V+++ EL+ + Sbjct: 168 NFGVDTASENELRQCLQQCVPAKDLICTAAIKSDSLID-LCLQQQVCIAVDNDDELQVVV 226 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 RA LG++A IA R+ +K + + + Q + + Sbjct: 227 DRANELGRQARIALRL-GGFQHEGNKLPTRFGFDVDRDCDLPQRLTSLPVMVQGIHFHLD 285 Query: 195 GVDMHI--------------------------GSQIDQIESFHKAFKLLRDLTQQLRSNG 228 G D + + + + R+ Sbjct: 286 GYDAGQRVSALSVAMEWVERLRAVGQPVEFIDMGGGFPMSYLEEHRQWATFWKEHRRALL 345 Query: 229 HNIQHIDVGG-------------GLGIAYHSDHRPPSSSDYA---------SLIHQYFGN 266 + G G Y RP A I Sbjct: 346 GERDTLTYRGHGLGLAIEGGRVVGQPKMYPFFQRPVRGHWLAGVLDSRIEGKTIADRLVE 405 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 L ++ EPGR ++ G+ V +V K++A+ ++I R + D + + Sbjct: 406 LNVQLRCEPGRSILDGCGLTVARVEFRKQNAEGDWLIGLSMNRTQCRTSSDDFLVDPILV 465 Query: 327 VNPAG-----DRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAY 374 + + + +VG C + I+L RK+ P + GDL+ T Y Sbjct: 466 PKQSSFGRATETKPMLGYLVGAYCTESELISL-RKMQFPSGVQRGDLIAFPNTAGY 520 >gi|38347503|emb|CAE02414.2| OSJNBa0095E20.1 [Oryza sativa Japonica Group] Length = 301 Score = 82.6 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 1/112 (0%) Query: 275 PGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL 334 PGR+ L +VI ++ D +D + + L D+Y + A Sbjct: 177 PGRYFAETAFTLAARVIGKRRRGDVREYWIDDGVYGSLNCILLDSYVPRPRPLAGARPGE 236 Query: 335 HIHA-DIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 HA + GP C++ D + ++ D L + GAY ++N Sbjct: 237 ETHASTVFGPTCDSIDTVVTGYQLPEMSVDDWLVFDDMGAYTTAAGSSFNGF 288 Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 2/129 (1%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + Y + A G YA+K N + A++ LA LG+G D S E+ Sbjct: 52 FHVLDLAKVVDLYAGWRRALPG--VRPFYAVKCNPDTALLGALAALGAGFDCASRAEIEA 109 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA VP IV++ K + A ++G+ +SE E+ + + S I Sbjct: 110 VLALGVPPAAIVYANPCKPGAHVAFAAEAGVNVTTYDSEEEVAKVKRCHPSCELLLRIKA 169 Query: 149 RVNPDINAN 157 + Sbjct: 170 PDCGGVKPG 178 >gi|289674139|ref|ZP_06495029.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae FF5] Length = 243 Score = 82.6 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 8/229 (3%) Query: 22 AHVVQT-PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 A ++T P + Y A++++ A + YA+KANS +++TLA L SG Sbjct: 15 AQALETDPLAAFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGF 73 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 +I S GE+ + A + VFSG GK ++ AL + ++ES +E+ L Q A Sbjct: 74 EISSGGEIE-RVMACPTRKPYVFSGPGKLDSDLRSALLHKVEAIHLESLNEIARLQQLAE 132 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 G+ P+ R+NP + A +++ FGI + + + G + Sbjct: 133 QAGRVQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHV 192 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLR---SNGHNIQHIDVGGGLGIAY 244 H S +E + Q+ + + + H +VGGG+G+ Y Sbjct: 193 HAMSHQMSVERHEQLLDFYLQRWQEWKALARDPGQLTHFNVGGGIGVDY 241 >gi|167924132|ref|ZP_02511223.1| hypothetical protein BpseBC_36578 [Burkholderia pseudomallei BCC215] Length = 155 Score = 82.6 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 5/129 (3%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR----PTLYDAYHEINY 325 +I+LE GR+LV++ GI V V+ K S F+++D M+ + + Sbjct: 27 EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNMGQLIRRNYPVV 86 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNS 384 + N ++VGP+C D I +A RPGDLL + ++GAYG S + S Sbjct: 87 VGNRVVGDERERVNVVGPLCTPLDIIVHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 146 Query: 385 RLLIPEIMV 393 + E++V Sbjct: 147 QPAAREVIV 155 >gi|167899623|ref|ZP_02487024.1| hypothetical protein Bpse7_38170 [Burkholderia pseudomallei 7894] Length = 160 Score = 82.6 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 5/129 (3%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR----PTLYDAYHEINY 325 +I+LE GR+LV++ GI V V+ K S F+++D M+ + + Sbjct: 32 EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNMGQLIRRNYPVV 91 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNS 384 + N ++VGP+C D I +A RPGDLL + ++GAYG S + S Sbjct: 92 VGNRVVGDERERVNVVGPLCTPLDIIVHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 151 Query: 385 RLLIPEIMV 393 + E++V Sbjct: 152 QPAAREVIV 160 >gi|297738879|emb|CBI28124.3| unnamed protein product [Vitis vinifera] Length = 370 Score = 82.6 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 47/144 (32%), Gaps = 3/144 (2%) Query: 245 HSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 D I KI+ EPGRF LV+ +I + +K + Sbjct: 211 DKIIMWHKKCDLLLRIKAPNDEKDLKIMAEPGRFFAETAFTLVSNIIGKRVRGEKREYWI 270 Query: 305 DVAMNDFMRPTLYDAYHEINYI---VNPAGDRLHIHADIVGPICETGDFIALNRKIALPR 361 D + YD + + ++ + + GP C++ D + ++ Sbjct: 271 DDGIYGSFNLPAYDKSSMMVKPLLGGSEWMNKAKFSSTVFGPTCDSMDMVVAESQLPELH 330 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSR 385 D+L GAY A +N Sbjct: 331 MNDVLVFYNMGAYTASAGTRFNGF 354 Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 2/114 (1%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY A+ + + A + + YA+K N +I LA LG+ D S E+ Sbjct: 110 PFYILDLGAVVRLMDMWKQALP--NVVPYYAVKCNCQPPLITALASLGANFDCASRAEIE 167 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 +A V A++IV++ K + A G+ +S E+ + Sbjct: 168 TVMALGVGAQQIVYANPCKGESHLKYAASVGVNLTTFDSMQEIDKIIMWHKKCD 221 >gi|254300827|ref|ZP_04968271.1| Orn/DAP/Arg decarboxylases family 2 [Burkholderia pseudomallei 406e] gi|157810918|gb|EDO88088.1| Orn/DAP/Arg decarboxylases family 2 [Burkholderia pseudomallei 406e] Length = 155 Score = 82.6 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 5/142 (3%) Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT- 315 A +I+LE GR+LV++ GI V V+ K S F+++D M+ + + Sbjct: 14 ALCADAARALPDAEIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASG 73 Query: 316 ---LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 + + N ++VGP+C D IA +A RPGDLL + ++G Sbjct: 74 NLGQLIRRNYPVVVGNRVVGDDRERVNVVGPLCTPLDIIAHQATLATARPGDLLVVFQSG 133 Query: 373 AYGAVQSGT-YNSRLLIPEIMV 393 AYG S + S+ E++V Sbjct: 134 AYGLTASPNGFLSQPAAREVIV 155 >gi|21780334|gb|AAM77684.1|AF521192_1 ornithine decarboxylase [Capsicum annuum] Length = 335 Score = 82.6 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 100/292 (34%), Gaps = 15/292 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + ++ A + YA+K N + + LA +GS D S E+ Sbjct: 54 PFYVLDLGEVVSLMDQWNVALP--NVRPFYAVKCNPEPSFLSMLAAMGSNFDCASRAEIE 111 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L+ + ERIVF+ K +I A + G+ +SE E+ + + I Sbjct: 112 YVLSLGISPERIVFANPRKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPRCELLLRI- 170 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + + + + + +SGV HIGS Sbjct: 171 ---------KPMNDGNARCPMGPKYGALPKEIEPLLRIAQASRLTVSGVSFHIGSGDADS 221 Query: 208 ESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 ++ A + + + + + +DVG G + + +L + Sbjct: 222 NAYLGAIAAAKQVFKTAAKFGMSKVNVLDVGDGFTSGHQFTTAATAVKS--ALQQHFSNE 279 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + II EPGRF L T +I + D ++ + M LYD Sbjct: 280 PELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYWINDGLYGSMNCVLYD 331 >gi|237508163|ref|ZP_04520878.1| Orn/DAP/Arg decarboxylase family 2 [Burkholderia pseudomallei MSHR346] gi|235000368|gb|EEP49792.1| Orn/DAP/Arg decarboxylase family 2 [Burkholderia pseudomallei MSHR346] Length = 155 Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 5/129 (3%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR----PTLYDAYHEINY 325 +I+LE GR+LV++ GI V V+ K S F+++D M+ + + Sbjct: 27 EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNMGQLIRRNYPVV 86 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNS 384 + N ++VGP+C D I +A RPGDLL + ++GAYG S + S Sbjct: 87 VGNRVVRDERERVNVVGPLCTPLDIIVHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 146 Query: 385 RLLIPEIMV 393 + E++V Sbjct: 147 QPAAREVIV 155 >gi|324504368|gb|ADY41886.1| Ornithine decarboxylase [Ascaris suum] Length = 510 Score = 82.2 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 61/374 (16%), Positives = 116/374 (31%), Gaps = 41/374 (10%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL-GSGLDIVSEGEL 86 PFY +E + Y+L+ N++ +++ L G + EL Sbjct: 69 PFYVMDMGRLENLLNAWREHMPR--VQPFYSLRCNADPVLLRLLVEQPDVGFCCTNRVEL 126 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A+ ER++++ T + A + GI ES +L ++ + Sbjct: 127 NMAVELAGR-ERVLYANPLWTRGSVRHAREMGIELLLFESREDLLRMHAAYPEASLVLRV 185 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + G + + GVK+ G+ IG+ Sbjct: 186 CMNA------------PVSEGSMRVGCELMGEAPELLSMAADLGVKVVGISFSIGAGACS 233 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA-----SLIH 261 + + A L S GH++ +D+GGG + S Sbjct: 234 LGIYAYAIAQACRLFGVAASLGHDLCVLDIGGGFPCGSPTRGPSFSQVAATISASLDEYF 293 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA-----------------DKTFVIL 304 +II EPGR+ A V L+T +I + +T Sbjct: 294 PESSFGHVRIIAEPGRYFAASVFSLITNIIDKRAVDASVVTNDVFDSGTAGFVYQTNEGF 353 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG--DFIALNRKIALPRP 362 + + + V+ + +A I+GP + D + ++ + Sbjct: 354 FGSFGCRLTAFCEPKCRPLVECVHDVSADNYTYATILGPT-LSNNVDIVQPVARLPQMQI 412 Query: 363 GDLLYIEKTGAYGA 376 G+ L + GAY Sbjct: 413 GEWLLWDDMGAYSM 426 >gi|126669235|ref|ZP_01740145.1| putative diaminopimelate decarboxylase protein [Marinobacter sp. ELB17] gi|126626303|gb|EAZ96987.1| putative diaminopimelate decarboxylase protein [Marinobacter sp. ELB17] Length = 244 Score = 82.2 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 86/223 (38%), Gaps = 5/223 (2%) Query: 20 KLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L P Y Y ++ + A + YA KAN + +++TL G Sbjct: 24 DLQRQHSDPLCAYIYDLDSLSSHVQAVVEALP-PQCEMFYATKANPSLPLLQTLTPWVHG 82 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 L++ S GELR P ++F G GK + E+ A++S + +VES EL+ L + Sbjct: 83 LEVASGGELRWVRD-HFPELPVIFGGPGKLVSELKHAVESNVELIHVESLLELERLTEIT 141 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + I R+N ++ +++ G FG+ + + V++ G Sbjct: 142 GKSQQTQEILLRINLNLPEMATTRLTMGGVPTPFGMDEDTLQQALPMLARASHVRLRGFH 201 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGG 239 H+ S + + Q I I+VGGG Sbjct: 202 FHLMSHQLDPDRHLALIQTYCRRVSQWESDYDLQITQINVGGG 244 >gi|311739239|ref|ZP_07713076.1| diaminopimelate decarboxylase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305665|gb|EFQ81731.1| diaminopimelate decarboxylase [Corynebacterium pseudogenitalium ATCC 33035] Length = 462 Score = 82.2 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 69/424 (16%), Positives = 128/424 (30%), Gaps = 47/424 (11%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT--MVCYALKANSNQAVIKTLAHLG 75 + L +P ++ + N +A V +A KAN + G Sbjct: 35 VSALTSRYGSPVNVLNSAPLRHNAQELLDAGASHGVATQVFFARKANKALCFVDAARDAG 94 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G+D+ SE ELR+ L V ERI+ S KT + LA+ G + +S +E + + Sbjct: 95 LGVDVASENELRQVLDRGVAPERIILSAAIKTDGLLRLAVSRG-VTISCDSRAESRRIAA 153 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A +L A +A R+ PD ++ + + ++ + + + Sbjct: 154 IAQALDTTAHVAPRLAPDPDSLPPTRFGERLPAWRQAEWPQELRVVGVHVHLHGYSEADR 213 Query: 196 --------------------VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 D + + L + + Sbjct: 214 RTALAEAIALIEHVRALGQPADFIDIGGGVPMSYLESREQWEYYLERIASQRTGTGKPFT 273 Query: 236 VGGGLGIAYHSDHRPPSSSDY-----------ASLIHQYFGNLQCKIILEPGRFLVADVG 284 + + P+ + + LEPGR L+ G Sbjct: 274 WKADPLSNTYPFWQEPTRGQWLDQLLSGEVPGYGTAGTALRERDIALHLEPGRSLLDGCG 333 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI--NYIVNPAGDRLHIHAD--I 340 +++ +V +K+ +D +I R D + PA + + Sbjct: 334 VILAEVSFLKERSDGLPLIGVAMNRTQCRTAADDILLDPLLVPTAGPAKEISREPRTGFV 393 Query: 341 VGPICETGDFIALNRKI--AL-PRPGDLLYIEKTGAYGA---VQSGTYNSRLLIPEIMVN 394 VG C D + L R++ GD L I T Y + L + + Sbjct: 394 VGAYCIE-DEVILRRELDFPDGIAVGDTLAIPNTAGYFMHILESASH--QIPLARNVFYD 450 Query: 395 GSQF 398 G + Sbjct: 451 GDDW 454 >gi|309800151|ref|ZP_07694337.1| carboxynorspermidine decarboxylase [Streptococcus infantis SK1302] gi|308116198|gb|EFO53688.1| carboxynorspermidine decarboxylase [Streptococcus infantis SK1302] Length = 360 Score = 82.2 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 102/331 (30%), Gaps = 23/331 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V P Y +E+N + V A KA S ++ SG Sbjct: 4 EQVPAPAYVIDLAKLEENCSILQEVQEKAGCKVLLAQKAYSLYKTYPLISQYLSGTTASG 63 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A P E VF+ K D +L S FN E + Sbjct: 64 LYEAKLARE-EFPGEVHVFAPAFKESDMEELLQISDHIDFNS----ERQLRKYGQRCREA 118 Query: 143 KAPIAFRVNPDINANT-HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R+NP + H +FG+ +I S L V Sbjct: 119 GISVGLRINPQCSTQGDHALYDPCAPGSRFGVTSDKIPS-----DLLELVDGLHFHTLCE 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D +++ KA + Q + H ++ +++GGG I S I Sbjct: 174 QGADDLQTTLKAVE------DQFGAYLHQVKWLNMGGGHHITRDDYDVDL----LISEIK 223 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + + +EPG + + G L T+V+ I ++ +T V+ A + + + Sbjct: 224 RIRETYNLDVYVEPGEAIALNAGYLATEVLDIVENGIETLVLDASASCHMP--DVLEMPY 281 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + C TGD I Sbjct: 282 RPPLRDGFEAQEKPYTYRLSSNTCLTGDVIG 312 >gi|261757576|ref|ZP_06001285.1| LOW QUALITY PROTEIN: orn/DAP/Arg decarboxylase [Brucella sp. F5/99] gi|261737560|gb|EEY25556.1| LOW QUALITY PROTEIN: orn/DAP/Arg decarboxylase [Brucella sp. F5/99] Length = 306 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 67/220 (30%), Gaps = 14/220 (6%) Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + + + + F ++L D+ ++ S H ++ + +GGG+ H Sbjct: 94 MDRITGFMIHNNCENSDFSLFDRMLSDIEEKFGSLLHRVEWVSLGGGI----HFTGEDYP 149 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 + + + + ++ LEPG + L V+ + ++ + Sbjct: 150 VDAFCARLKSFSEKFGVQVYLEPGEASITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHML 209 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 +Y A + + G C GD GD L E Sbjct: 210 DLLIY------REKAKMAPNNGGHSYMVCGKSCLAGDIFGEFTFDKPLAIGDRLSFEDAA 263 Query: 373 AYGAVQSGTYNSRLLIPEIMVN--GSQFHIIRPRMTFQEL 410 Y V+ +N + I V ++R + + Sbjct: 264 GYTMVKKNWFNGVKMPA-IAVRELDGTVKLVRE-FDYADF 301 >gi|254184552|ref|ZP_04891141.1| Orn/DAP/Arg decarboxylases family 2 [Burkholderia pseudomallei 1655] gi|184215144|gb|EDU12125.1| Orn/DAP/Arg decarboxylases family 2 [Burkholderia pseudomallei 1655] Length = 155 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 5/129 (3%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT----LYDAYHEINY 325 +I+LE GR+LV++ GI V V+ K S F+++D M+ + + + Sbjct: 27 EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNLGQLIRRNYPVV 86 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-YNS 384 + N ++VGP+C D I +A RPGDLL + ++GAYG S + S Sbjct: 87 VGNRVVGDERERVNVVGPLCTPLDIIVHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 146 Query: 385 RLLIPEIMV 393 + E++V Sbjct: 147 QPAAREVIV 155 >gi|198434359|ref|XP_002122694.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Ciona intestinalis] Length = 389 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 67/185 (36%), Gaps = 12/185 (6%) Query: 19 EKLAHVV----------QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVI 68 +KLA+ + FY I +N + + YA+K N +Q VI Sbjct: 32 KKLANKFVRSQQKLKESDSSFYLGDLGQIVRNLQMWRKHMPQI--RPYYAMKCNPSQPVI 89 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 + LA LG G D S E+ AL V + I+F+ K I A Q+G+ ++ Sbjct: 90 QLLASLGVGFDCASGFEIESALKCGVQPDDILFAVPCKMSSHIKYACQTGVRTMTFDNAD 149 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 EL + + + I+ + + + GI + I T Sbjct: 150 ELHKIKRIHPTGNFHPGSGSNSFDPIDRSLQQCRELYDFANLNGIDLKIIDIGGGLVCTE 209 Query: 189 PGVKI 193 +K+ Sbjct: 210 SFIKV 214 Score = 69.9 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 78/240 (32%), Gaps = 5/240 (2%) Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI--D 205 + + K+ + A L +K + + Sbjct: 111 LKCGVQPDDILFAVPCKMSSHIKYACQTGVRTMTFDNADELHKIKRIHPTGNFHPGSGSN 170 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + ++ + R+L NG +++ ID+GGGL S ++ + Sbjct: 171 SFDPIDRSLQQCRELYDFANLNGIDLKIIDIGGGL--VCTESFIKVSFQITTAVNKLFPP 228 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 K+I EPG FLV + VT V D + + ++ + I Sbjct: 229 ETGVKVIAEPGTFLVENAFSFVTNVHGKALVGDTAKYYIGAGVFTAFNLKFFEEFKRIPE 288 Query: 326 IVNPAGDR-LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 ++ ++ + + GP C D + N + + D + GAY ++ S +N Sbjct: 289 NLSREAEKGKYYRTSVYGPTCAGDDCVVDNIMLPEAQINDWWIFDNMGAYSSLVSLGFNG 348 >gi|62390971|ref|YP_226373.1| decarboxylase [Corynebacterium glutamicum ATCC 13032] gi|41326310|emb|CAF20472.1| decarboxylase [Corynebacterium glutamicum ATCC 13032] Length = 884 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 65/383 (16%), Positives = 128/383 (33%), Gaps = 31/383 (8%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNA--FDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 L +P + ++ +N +A G+DT + +A KAN + + G G+ Sbjct: 473 LIEEFGSPVNVLHSGSMPRNINELVDAGIQMGVDTRIFFARKANKGLTFVDAVKDTGHGV 532 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D+ SE EL + L VP ERI+ S K + LA+++G +V+S EL ++ Sbjct: 533 DVASERELSQVLNRGVPGERIILSAAIKPDRLLALAIENG-VIISVDSRDELDRISALVG 591 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG-VKISGVD 197 + +P + T ++ I + + + K + Sbjct: 592 DRVARVAPRVAPDPAVLPPTRFGERAADWGNRLTEVIPGVDIVGLHVHLHGYAAKDRALA 651 Query: 198 MHIGSQIDQ-------------------IESFHKAFKLLRDLTQQLRSNGHNIQHIDV-- 236 + Q+ + +R + + ++ + Sbjct: 652 LQECCQLVDSLRECGHSPQFIDLGGGVPMSYIESEEDWIRYQSAKSATSAGYAESFTWKD 711 Query: 237 ---GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 + + Q + ++ LEPGR L+ G+ + +V + Sbjct: 712 DPLSNTYPFYQTPVRGNWLKDVLSKGVAQMLIDRGLRLHLEPGRSLLDGCGVTLAEVAFV 771 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K +D ++ R T D + +I + +VG C + I Sbjct: 772 KTRSDGLPLVGLAMNRTQCRTTSDDFLIDPLHITDGDVGEEIEAY-LVGAYCIEDELILR 830 Query: 354 NR-KIAL-PRPGDLLYIEKTGAY 374 R + +PGD++ I T Y Sbjct: 831 RRIRFPRGVKPGDIIGIPNTAGY 853 >gi|23308900|ref|NP_601336.2| diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC 13032] gi|21324905|dbj|BAB99528.1| Diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC 13032] Length = 429 Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 65/383 (16%), Positives = 128/383 (33%), Gaps = 31/383 (8%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNA--FDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 L +P + ++ +N +A G+DT + +A KAN + + G G+ Sbjct: 18 LIEEFGSPVNVLHSGSMPRNINELVDAGIQMGVDTRIFFARKANKGLTFVDAVKDTGHGV 77 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D+ SE EL + L VP ERI+ S K + LA+++G +V+S EL ++ Sbjct: 78 DVASERELSQVLNRGVPGERIILSAAIKPDRLLALAIENG-VIISVDSRDELDRISALVG 136 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG-VKISGVD 197 + +P + T ++ I + + + K + Sbjct: 137 DRVARVAPRVAPDPAVLPPTRFGERAADWGNRLTEVIPGVDIVGLHVHLHGYAAKDRALA 196 Query: 198 MHIGSQIDQ-------------------IESFHKAFKLLRDLTQQLRSNGHNIQHIDV-- 236 + Q+ + +R + + ++ + Sbjct: 197 LQECCQLVDSLRECGHSPQFIDLGGGVPMSYIESEEDWIRYQSAKSATSAGYAESFTWKD 256 Query: 237 ---GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 + + Q + ++ LEPGR L+ G+ + +V + Sbjct: 257 DPLSNTYPFYQTPVRGNWLKDVLSKGVAQMLIDRGLRLHLEPGRSLLDGCGVTLAEVAFV 316 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K +D ++ R T D + +I + +VG C + I Sbjct: 317 KTRSDGLPLVGLAMNRTQCRTTSDDFLIDPLHITDGDVGEEIEAY-LVGAYCIEDELILR 375 Query: 354 NR-KIAL-PRPGDLLYIEKTGAY 374 R + +PGD++ I T Y Sbjct: 376 RRIRFPRGVKPGDIIGIPNTAGY 398 >gi|259506368|ref|ZP_05749270.1| diaminopimelate decarboxylase [Corynebacterium efficiens YS-314] gi|259166046|gb|EEW50600.1| diaminopimelate decarboxylase [Corynebacterium efficiens YS-314] Length = 888 Score = 81.4 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 63/383 (16%), Positives = 122/383 (31%), Gaps = 31/383 (8%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLGSGL 78 L + +P + ++ +N A G+DT + +A KAN + + G G+ Sbjct: 458 LINEFGSPVNVLHSGSMPRNINELVEAGAQMGVDTRIFFARKANKGLTFVDAVRDAGHGV 517 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D+ SE EL + L VP ERI+ S K ++LA+ +G + +S E + A Sbjct: 518 DVASERELSQVLGRGVPGERIILSAAIKPDSLLELAIANG-VVISADSRDEFDRIAALAG 576 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL---------- 188 + +P T G P+ + + + Sbjct: 577 DSLARVAPRVAPDPATMPPTRFGERVGDWARHLAAPVPGVDIVGLHVHLHGYSAVDRAAA 636 Query: 189 ---------------PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 + + + ++ R ++ + Sbjct: 637 LRECCELVDALTTAGHTPRFIDLGGGVPMSYLDSTEQWLKYQSARSAAVDGYADPFTWKS 696 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 + P + + ++ LEPGR L+ G+++ +V + Sbjct: 697 DPLNTTYPYHQTPVRGPWLKQVLGDGVAEMLIERGLRLHLEPGRSLLDGCGLILAEVAFV 756 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K +D ++ R T D + +I + A +VG C + I Sbjct: 757 KTRSDGVPLVGLAMNRTQCRTTSDDYLVDPLHITDEADGEEREAF-LVGAYCIEDELILR 815 Query: 354 NR-KIAL-PRPGDLLYIEKTGAY 374 R + + GD++ I T Y Sbjct: 816 RRIRFPRGVKAGDIIGIPNTAGY 838 >gi|25027975|ref|NP_738029.1| hypothetical protein CE1419 [Corynebacterium efficiens YS-314] gi|23493258|dbj|BAC18229.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 894 Score = 81.4 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 63/383 (16%), Positives = 122/383 (31%), Gaps = 31/383 (8%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLGSGL 78 L + +P + ++ +N A G+DT + +A KAN + + G G+ Sbjct: 464 LINEFGSPVNVLHSGSMPRNINELVEAGAQMGVDTRIFFARKANKGLTFVDAVRDAGHGV 523 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D+ SE EL + L VP ERI+ S K ++LA+ +G + +S E + A Sbjct: 524 DVASERELSQVLGRGVPGERIILSAAIKPDSLLELAIANG-VVISADSRDEFDRIAALAG 582 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL---------- 188 + +P T G P+ + + + Sbjct: 583 DSLARVAPRVAPDPATMPPTRFGERVGDWARHLAAPVPGVDIVGLHVHLHGYSAVDRAAA 642 Query: 189 ---------------PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 + + + ++ R ++ + Sbjct: 643 LRECCELVDALTTAGHTPRFIDLGGGVPMSYLDSTEQWLKYQSARSAAVDGYADPFTWKS 702 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 + P + + ++ LEPGR L+ G+++ +V + Sbjct: 703 DPLNTTYPYHQTPVRGPWLKQVLGDGVAEMLIERGLRLHLEPGRSLLDGCGLILAEVAFV 762 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K +D ++ R T D + +I + A +VG C + I Sbjct: 763 KTRSDGVPLVGLAMNRTQCRTTSDDYLVDPLHITDEADGEEREAF-LVGAYCIEDELILR 821 Query: 354 NR-KIAL-PRPGDLLYIEKTGAY 374 R + + GD++ I T Y Sbjct: 822 RRIRFPRGVKAGDIIGIPNTAGY 844 >gi|326435760|gb|EGD81330.1| ornithine decarboxylase [Salpingoeca sp. ATCC 50818] Length = 344 Score = 81.4 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 33/98 (33%) Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + ++F + LY + + + GP C++ D Sbjct: 170 MYYVNDGVYQSFNCIIFDHARVQAQVLYTGNGVPAMDDEHLAAAVLHESSVWGPTCDSID 229 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 + + + GD L + GAY + + T+N L Sbjct: 230 CVQASTMLPELDVGDWLVFDNMGAYTSCAASTFNGFAL 267 >gi|200131|gb|AAA39848.1| ornithine decarboxylase (EC 4.1.1.17) [Mus musculus] Length = 142 Score = 81.4 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 29/89 (32%) Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGD 364 D F A+ + P D H + I GP C+ D I + GD Sbjct: 1 DGVYGSFNCILYDHAHVKALLQKRPKPDEKHYSSSIWGPTCDGLDRIVERCNLPEMHVGD 60 Query: 365 LLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + E GAY + T+N V Sbjct: 61 WMLFENMGAYTVAAASTFNGFQRPNIYYV 89 >gi|198430949|ref|XP_002123942.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Ciona intestinalis] Length = 298 Score = 81.4 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 2/116 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + FY + +N ++ + YA+K N +Q V++ LA LG G D S Sbjct: 43 KEWDSSFYLGDLGQVVRNLQMWTKHMPKI--RPYYAMKCNPSQPVVQLLASLGVGFDCAS 100 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 + E+ AL V E I+F+ K I+ A Q+G+ V++ EL + + Sbjct: 101 KFEIETALKCGVKPEDILFAVPCKMSSHIEYACQTGVQVMTVDNADELHKIKRIHP 156 >gi|294638406|ref|ZP_06716643.1| pyridoxal-dependent decarboxylase [Edwardsiella tarda ATCC 23685] gi|291088475|gb|EFE21036.1| pyridoxal-dependent decarboxylase [Edwardsiella tarda ATCC 23685] Length = 235 Score = 81.4 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 78/210 (37%), Gaps = 5/210 (2%) Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLT-QQLRSNG 228 FG+ + + + +++ G H+ S +++ + Q R Sbjct: 5 PFGLDTTDLAAALRLIADCRWLRLRGFHFHLLSHQLSVDNHLALIQHCLTQVGQWCRQFQ 64 Query: 229 HNIQHIDVGGGLGIAYHSDHRPPSSSDYASL---IHQYFGNLQCKIILEPGRFLVADVGI 285 +I+ +++GGG GI Y D+ + + E GR++ A G Sbjct: 65 LSIEMVNLGGGFGINYRDPSHHFDWDDFCQRLPAVRHACQATSWLLRFECGRYISAPCGY 124 Query: 286 LVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH-IHADIVGPI 344 V +V+ IK++ + F I + F P H + ++ +VG + Sbjct: 125 YVMEVLDIKRNLGEWFAIGHGGTHHFRTPVAQGHDHPFQVVRRETPAQIRDQRVTLVGQL 184 Query: 345 CETGDFIALNRKIALPRPGDLLYIEKTGAY 374 C D +A + I+ PGD L GAY Sbjct: 185 CTPKDVLARRQPISALAPGDWLVFPLAGAY 214 >gi|23012658|ref|ZP_00052688.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 326 Score = 81.0 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 70/315 (22%), Positives = 115/315 (36%), Gaps = 11/315 (3%) Query: 92 APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVN 151 A P RIV G +T +I L G+ +VES L+ N A G P+ RVN Sbjct: 6 AVGPGARIVMGGPARTEGDIRTLLAHGVERLHVESLHSLRLANAVAERSGAILPVLLRVN 65 Query: 152 PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFH 211 G +FGI I A ++ G H S Sbjct: 66 LAGPVPGATLTMGGAA-TQFGIEQASIPDAIATLRDCRALRFEGFHFHTVSNNRDAAGHA 124 Query: 212 KAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCK 270 DL + +++ I++GGG G+ Y + AS + G+ + Sbjct: 125 ALCAAEIDLARAWAGEHGLDLRVINLGGGWGVDYADPAWRFDTERLASALRPLAGSGP-R 183 Query: 271 IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 + E GR + A + +V+ +K+S + F +L + F P+ + H + + Sbjct: 184 LQFECGRIVAAYHAAYLCEVLDLKRSHGRAFALLRGGTHHFRLPSSWAHDHPFHILPREE 243 Query: 331 GDRL-------HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT-Y 382 D + + G +C D +A + +A R GDL+ E GAYG S + Sbjct: 244 WDHPWPRPEIARMPVTLAGELCTPKDVLARDVPVARLRVGDLVCFEMAGAYGWDISHHDF 303 Query: 383 NSRLLIPEIMVNGSQ 397 I ++ + Sbjct: 304 LCHAHPERIFLDQGR 318 >gi|298712993|emb|CBJ26895.1| Ornithine decarboxylase [Ectocarpus siliculosus] Length = 634 Score = 81.0 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 86/226 (38%), Gaps = 6/226 (2%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL-GSGLDIVSEGELR 87 F+ + Y + + F + YA+K N N V++ LA G G D S E+ Sbjct: 94 FFAVDLECVLHKYRRWHDCFPRVKP--FYAVKCNPNSEVVRVLAATPGCGFDCASPAEMD 151 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + L V RI+++ K + ++ AL +G+ +S+ EL + + + K + Sbjct: 152 QVLECGVDPSRIIYANPCKDLAALEHALSAGVATMTFDSKDELYKIRRLLDTRAKVSDGG 211 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV---KISGVDMHIGSQI 204 + + ++ + G + +L + G+ H GS Sbjct: 212 LGESSVVQLVLRLRVPDSHSDCPLGEKYGAPEEACSELISLAVELRLPLVGISFHCGSGC 271 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 +++ +A + + + G + +D+GGG S++ Sbjct: 272 QNAQAYPEALAVAKSVFDLAAQKGVMLTLLDIGGGFPGWDGSEYVY 317 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 22/44 (50%) Query: 337 HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 HA ++GP D +A R + PGD LY + GAY A + Sbjct: 567 HAVVMGPSGLPTDVVARKRLPSSLGPGDWLYFSQMGAYTASIAT 610 >gi|73974233|ref|XP_858612.1| PREDICTED: similar to Antizyme inhibitor 1 (AZI) (Ornithine decarboxylase antizyme inhibitor) isoform 7 [Canis familiaris] Length = 389 Score = 81.0 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 106/350 (30%), Gaps = 30/350 (8%) Query: 61 ANSNQAVIKTLAHLGSGLDIV----SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 AN + ++ +LG+ +D + E+ V E I++ K + +I A + Sbjct: 8 ANYSVGLLDEGTNLGNVIDNYVYEHTLTEMALVQELGVSPENIIYISPCKQVSQIKYAAK 67 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 G+ ++E ELK + + + IA T I + KFG + Sbjct: 68 IGVNTMTCDNEVELKKIARNHPNAKVLLHIA----------TEDNIGGEEGNMKFGTTLK 117 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 L A L +I GV H+ S + + + A R + G + +D+ Sbjct: 118 NCRHLLECAKELDV-QIIGVKFHVSSACKESQVYVHALSDARCVFDMAGEFGFTMNMLDI 176 Query: 237 GGGLGIAYH-----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 GGG + P Y + F +A I V Sbjct: 177 GGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYVSSAFTLAVNIIAKKVVE 236 Query: 292 SIKKSAD----------KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + K + + + D F D D + + Sbjct: 237 NDKFPSGVEKTGSDEPAFMYYMNDGIYGSFASKLSEDLNTIPEVHKKYKKDEPLFTSSLW 296 Query: 342 GPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 GP C+ D I + + GD L + GA + +N Sbjct: 297 GPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAFNDFQRPAIY 346 >gi|224535494|ref|ZP_03676033.1| hypothetical protein BACCELL_00357 [Bacteroides cellulosilyticus DSM 14838] gi|224522887|gb|EEF91992.1| hypothetical protein BACCELL_00357 [Bacteroides cellulosilyticus DSM 14838] Length = 92 Score = 80.6 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFS-NAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 ++TPFY Y T + A + V YA+KAN+N V+ + G G D V Sbjct: 11 RELRTPFYYYDTKVLRDTLSCMRAEAAKYGNFEVHYAVKANANPKVLTIIRENGLGADCV 70 Query: 82 SEGELRRALAAPV 94 S GE+R A+ A Sbjct: 71 SGGEVRAAIKAGF 83 >gi|145296096|ref|YP_001138917.1| hypothetical protein cgR_2017 [Corynebacterium glutamicum R] gi|140846016|dbj|BAF55015.1| hypothetical protein [Corynebacterium glutamicum R] Length = 884 Score = 80.6 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 65/383 (16%), Positives = 128/383 (33%), Gaps = 31/383 (8%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 L +P + ++ +N +A G+DT + +A KAN + + G G+ Sbjct: 473 LIEEFGSPVNVLHSGSMPRNINELVDAGIEMGVDTRIFFARKANKGLTFVDAVKDTGHGV 532 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D+ SE EL + L VP ERI+ S K + LA+++G +V+S EL ++ Sbjct: 533 DVASERELSQVLNRGVPGERIILSAAIKPDRLLALAIENG-VIISVDSRDELDRISALVG 591 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG-VKISGVD 197 + +P + T ++ I + + + K + Sbjct: 592 DRVARVAPRVAPDPAVLPPTRFGERAADWGNRLTEVIPGVDIVGLHVHLHGYAAKDRALA 651 Query: 198 MHIGSQIDQ-------------------IESFHKAFKLLRDLTQQLRSNGHNIQHIDV-- 236 + Q+ + +R + + ++ + Sbjct: 652 LQECCQLVDSLRECGHSPQFIDLGGGVPMSYIESEEDWIRYQSAKSATSAGYAESFTWKD 711 Query: 237 ---GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 + + Q + ++ LEPGR L+ G+ + +V + Sbjct: 712 DPLSNTYPFYQTPVRGNWLKDVLSKGVAQMLIDRGLRLHLEPGRSLLDGCGVTLAEVAFV 771 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIAL 353 K +D ++ R T D + +I + +VG C + I Sbjct: 772 KTRSDGLPLVGLAMNRTQCRTTSDDFLIDPLHITDGDVGEEIEAY-LVGAYCIEDELILR 830 Query: 354 NR-KIAL-PRPGDLLYIEKTGAY 374 R + +PGD++ I T Y Sbjct: 831 RRIRFPRGIKPGDIIGIPNTAGY 853 >gi|87308556|ref|ZP_01090696.1| probable diaminopimelate decarboxylase [Blastopirellula marina DSM 3645] gi|87288648|gb|EAQ80542.1| probable diaminopimelate decarboxylase [Blastopirellula marina DSM 3645] Length = 504 Score = 80.6 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 68/418 (16%), Positives = 121/418 (28%), Gaps = 75/418 (17%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLGSGLD 79 +P + + KN F+ D V +A KAN + + G+G+D Sbjct: 61 VAEHGSPLNILHASPLAKNLAAFNRVAADHQLDFQVFFARKANKCLSFVDEATASGAGID 120 Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 + S EL++ +A V I+ + K + +Q G +++ EL+ L + Sbjct: 121 VASLAELQQVVANGVRRSHIICTAAIKEEALLAACVQHG-VTIAIDNGDELEQLASLLTN 179 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL---YAYASTLPGVKISGV 196 +A IA R++ + + +FGI I Q A P + I G+ Sbjct: 180 DSSQASIALRLSGFEHDG-------NRLHSRFGIDIGQFEDFVSRNRGALDSPALSIDGI 232 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+ A L +LR GH + +D+GGG+ ++Y D + Sbjct: 233 HFHLD--GYSASQRVSAISQCLGLIDRLRELGHVPKFLDIGGGVPMSYLEDKSQWETFWE 290 Query: 257 ASL-----------------------IHQYFGNLQCKIILEPGRFLVADVGILVTK---- 289 A Y E + ++ + Sbjct: 291 AHRESLLQRRDPITYRNHGLGFTAIEEKIYGSRNCYPYYQEGVQAQWLEMVLSGRCENKT 350 Query: 290 -------------------------------VISIKKSADKTFVILDVAMNDFMRPTLYD 318 V + F+ L + + Sbjct: 351 IATAIRERNLQLRCEPGRSLLDGCGLTIARVVFRKQHPNGDWFIGLAMNRTQCRTSSDDF 410 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR-KIAL-PRPGDLLYIEKTGAY 374 I I +VG C + + L + + GDL+ T Y Sbjct: 411 LVDPILIRSQVQNPAPAIEGYLVGAYCMESELLTLRKLRFPDGVEIGDLVAFPNTAGY 468 >gi|226328786|ref|ZP_03804304.1| hypothetical protein PROPEN_02686 [Proteus penneri ATCC 35198] gi|225201972|gb|EEG84326.1| hypothetical protein PROPEN_02686 [Proteus penneri ATCC 35198] Length = 51 Score = 80.6 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 20/40 (50%), Positives = 24/40 (60%) Query: 368 IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407 I TGAYGA S YNSR LIPE+++ +IR R T Sbjct: 2 IHDTGAYGASMSSNYNSRPLIPEVLITEGVPQLIRRRQTI 41 >gi|89073050|ref|ZP_01159597.1| carboxynorspermidine decarboxylase [Photobacterium sp. SKA34] gi|89051268|gb|EAR56724.1| carboxynorspermidine decarboxylase [Photobacterium sp. SKA34] Length = 366 Score = 80.3 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 51/380 (13%), Positives = 112/380 (29%), Gaps = 26/380 (6%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 + N + ALK S V + G E+R Sbjct: 2 IDEQKLINNLEQAKKLKQLSGVKLVLALKCFSTWGVFDVMKPYLDGTTSSGPFEVRLGAE 61 Query: 92 APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVN 151 E +S D ++ FN S+ + + + R+N Sbjct: 62 -KFGGETHAYSVGYSQEDVEEVLQYCNKIIFNSVSQLQANRHLADGKA-----SVGLRLN 115 Query: 152 PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFH 211 P I+ ++ + G+ + + +D + + +S Sbjct: 116 PGISCAGQDLADPARQYSRLGVQENLLIDEL----------FDDLDGAMFHMNCENKSAD 165 Query: 212 KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI 271 LL ++++ + + +GGG+ + A+ + + ++ Sbjct: 166 AFIALLDSISERFGRYLEKLDWVSLGGGVFFTWPD----YELEKLAAALKIFAERFDVQL 221 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 LEPG ++ L V+ I ++ KT ++ + +Y+ ++ A Sbjct: 222 YLEPGEAIITQTTDLAVTVVDIVENGIKTAIVDSATEAHRLDTLIYN----EPATISEAS 277 Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 ++ + I C GD + G L+I + Y V+ +N + Sbjct: 278 EKGNHQYVIGSCSCLAGDQFCVANFEQPLAIGQKLHIADSAGYTMVKLNWFNGLRMPSIY 337 Query: 392 MVN-GSQFHIIRPRMTFQEL 410 + T+Q+ Sbjct: 338 CRRIDGAVEKLNE-FTYQDF 356 >gi|90578911|ref|ZP_01234721.1| Diaminopimelate decarboxylase [Vibrio angustum S14] gi|90439744|gb|EAS64925.1| Diaminopimelate decarboxylase [Vibrio angustum S14] Length = 366 Score = 80.3 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 53/381 (13%), Positives = 116/381 (30%), Gaps = 28/381 (7%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 + N + ALK S V + G E+R Sbjct: 2 IDEQKLINNLEQAKKLKQLSGVKLVLALKCFSTWGVFDVMKPYLDGTTSSGPFEVRLG-- 59 Query: 92 APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVN 151 AE+ ++ ++ + N + + L KA + R+N Sbjct: 60 ----AEKFGGETHAYSVGYSQEDVEEVLEHCNKIIFNSVSQLQAHRHLADGKASVGLRLN 115 Query: 152 PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFH 211 P I+ ++ + G+ + L +D + + +S Sbjct: 116 PGISCAGQDLADPARQYSRLGV----------QENLLTDELFDDLDGAMFHMNCENKSAD 165 Query: 212 KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI 271 LL ++++ + + +GGG+ + + + + ++ Sbjct: 166 AFIALLDSISERFGRYLEKLDWVSLGGGVFYTWPD----YELEKLSLALKAFASRFNVQL 221 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 LEPG ++ LV V+ I ++ KT ++ + +Y+ ++ A Sbjct: 222 YLEPGEAIITQTADLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYN----EPATISEAS 277 Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 ++ I C GD + G L+I + Y V+ +N + Sbjct: 278 EKGSYQYVIGSCSCLAGDQFCVANFEQPLVIGQKLHIADSAGYTMVKLNWFNGLRMPSIY 337 Query: 392 M--VNGSQFHIIRPRMTFQEL 410 ++G + T+Q+ Sbjct: 338 CRRIDGGVEKL--NEFTYQDF 356 >gi|23379713|gb|AAM76599.1| ornithine decarboxylase 1 [Pan troglodytes] Length = 200 Score = 80.3 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 13/209 (6%) Query: 33 STTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAA 92 I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ + Sbjct: 2 DLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQLVQSL 59 Query: 93 PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 60 GVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA----- 114 Query: 153 DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK 212 T + + KFG + L A L + + GV H+GS E+F + Sbjct: 115 -----TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPETFVQ 168 Query: 213 AFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A R + G ++ +D+GGG Sbjct: 169 AISDARCVFDMGAEVGFSMYLLDIGGGFP 197 >gi|23379719|gb|AAM76602.1| ornithine decarboxylase 1 [Macaca sp.] Length = 200 Score = 80.3 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 13/209 (6%) Query: 33 STTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAA 92 I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ Sbjct: 2 DLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAAVGTGFDCASKTEIQLVQNL 59 Query: 93 PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 60 GVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVTRAHPKAKLVLRIA----- 114 Query: 153 DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK 212 T + + KFG + L A L + + GV H+GS E+F + Sbjct: 115 -----TDDSKAVCRLSVKFGATLRNSRLLLERAKEL-NIDVVGVSFHVGSGCTDPETFVQ 168 Query: 213 AFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A R + G ++ +D+GGG Sbjct: 169 AISDARCVFDMGAEVGFSMYLLDIGGGFP 197 >gi|296207399|ref|XP_002750716.1| PREDICTED: arginine decarboxylase [Callithrix jacchus] Length = 447 Score = 80.3 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 109/292 (37%), Gaps = 26/292 (8%) Query: 14 ENVSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 E S + L + + F+ AI + + F Y +K N Sbjct: 15 EGFSTQDLLEELTLGASQATTDKASAFFVADLGAIVRKHFYFLKCLPR--VRPFYVVKCN 72 Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 S+ V+K LA LG G ++ E+ +PA +I+++ K I +I A + GI Sbjct: 73 SSPGVLKVLAQLGLGFSCANKAEMELVQHIGIPASKIIYANPCKQIAQIKYAAKRGIQLL 132 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 + ++E EL + + S IA S + KFG+P+ L Sbjct: 133 SFDNEMELAKVVKSHPSAKMVLCIA----------NDDSHSLNRLSLKFGVPLKSCRHLL 182 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A V++ GV H+GS +++ ++ R + + GH + +D+GGG Sbjct: 183 ESAKKS-HVEVVGVSFHVGSGCPDPQAYAQSIADARLVFEMGTELGHRMHVLDLGGGFPG 241 Query: 243 AYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 + R + + + I+ E GR+ V + + + Sbjct: 242 TEGAKVRFEEIASVINSALDLYFPEGCGVDILAELGRYYVTSAFAVAVSITA 293 >gi|290955117|ref|YP_003486299.1| lysine/ornithine decarboxylase [Streptomyces scabiei 87.22] gi|260644643|emb|CBG67728.1| putative lysine/ornithine decarboxylase [Streptomyces scabiei 87.22] Length = 448 Score = 80.3 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 80/405 (19%), Positives = 129/405 (31%), Gaps = 41/405 (10%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 P++ + N F F G+D V YA KAN + A G G+D+ S+GE Sbjct: 32 PYHVLLPERFDANAAAFRRVFAEAGVDGRVYYAKKANKAAVYAERAAVAGLGVDVASQGE 91 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 LR ALAA V E +V +G K D + +A+ G EL L A LG+ A Sbjct: 92 LREALAAGVRGEDLVVTGPAKVDDLLRVAVLQGALIAVDAL-DELDRLLSLAEQLGRTAR 150 Query: 146 IAFRVNPD-------------INANTHKKISTGKKEDKFGIPI--------------HQI 178 + R P ++A + ++ + + F + Sbjct: 151 VLLRRLPPGQPHSRFGLDDGELDAALRRCVTGPVEMEGFSFHLSGYDTRQRADLAAESIG 210 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 A A L +IS + E + +S G + Sbjct: 211 LCTRARALGLRADRISIGGGFAVDYVGAEEWRRFEESRRPEHFHAEKSFGGFYPYHSPVA 270 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 G P+ + + + +++EPGR L+ G V +V +K+ Sbjct: 271 GADALRTILATTPAGAGEGTTLAGLLRAAGVTLLVEPGRALLDQAGFTVFRVQGVKERDG 330 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINY----IVNPAGDRLHIHADIVGPICETGDFIALN 354 + +D + + P D A + C D + Sbjct: 331 YALLTVDGSSLSLSEQWFDSEFLPDPVLVPAGSGPRADAGPYPACVGAATCLESDMLTWR 390 Query: 355 -RKIAL-PRPGDLLYIEKTGAYGAVQSGT---YNSRLLIPEIMVN 394 L P GDLL T Y ++ L P+ +V Sbjct: 391 KVPFPLRPAAGDLLVYLNTAGYQ--MDSNESPFHDLPLPPKAVVE 433 >gi|320037813|gb|EFW19750.1| pyridoxal-dependent decarboxylase [Coccidioides posadasii str. Silveira] Length = 396 Score = 79.9 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 110/325 (33%), Gaps = 37/325 (11%) Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++R L V RI+++ K+ D I A Q G+ ++E EL+ L + Sbjct: 1 MQRILNLGVEPHRILYAAPFKSEDGILYAKQHGVTQTMFDTEDELRKLADYFPNAELYLR 60 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + S + K+G+ + Q L A L +K+ G+ H+GS Sbjct: 61 LW----------ADDPSSRVRLGSKYGVQLPQAKELLVLAQEL-NMKVIGLCFHVGSSAA 109 Query: 206 QIESFHKA----FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 +++ +A ++ H I+ ID+GGG + Sbjct: 110 DFDAYRQAIAFTREVYDFNQSLREDQRHPIRTIDIGGGFSLGNFESAATVIRKSIRQY-- 167 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF------------VILDVAMN 309 + + + EPGR+ + LV +V+ + A + ++ + Sbjct: 168 -FGDEKHLRWVAEPGRYFAEEAFYLVCRVLGTRPRACLGNGIGADEKLPVGDIHINDGIY 226 Query: 310 DFMRPTLYDAYHEINYIVNPAGDR------LHIHADIVGPICETGDFIALNRKIAL-PRP 362 L + ++N G + G C++ D IA N + + Sbjct: 227 HNFLNALTEQVVPQPILLNCTGTPYVSAADNGDPYTVWGQTCDSFDKIATNCVLPRRAKV 286 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLL 387 GD L GAY V +N Sbjct: 287 GDWLCFPFMGAYTHVTGSDFNGFPR 311 >gi|328675890|gb|AEB28565.1| Diaminopimelate decarboxylase [Francisella cf. novicida 3523] Length = 440 Score = 79.9 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 70/419 (16%), Positives = 130/419 (31%), Gaps = 43/419 (10%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQAVIKTLAHLG 75 L+ + +V+ PF+ + N F + + V + KAN A + +A L Sbjct: 22 LDNIVNVINGPFHIIHPKSFTNNLSDFQKVLNNHNIVGQVYFGKKANKAGAWLTEVAKLN 81 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +D+ S EL L+ V + I +G K+ + + LA + G +++ EL+ Sbjct: 82 GAVDVASVPELIHTLSKGVQGKNIGVTGAAKSDELLWLAARHGAL-VAIDALDELERAIN 140 Query: 136 RAVSLGKKAPIAFR------------------------VNPDINANTHKKISTGKKEDKF 171 + K I R N T + S Sbjct: 141 IVANTNDKLRILLRVLPPNSPNSRFGFNSKDIVTALERCKDAKNHITMEGFSFHLDGYLV 200 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLR-----DLTQQLRS 226 + L + + IG + + + D ++ Sbjct: 201 EPRVEMAFILIDWCIKAKEYGFPSSSISIGGGFACSYVEEEDWHNFKAAYSPDQFHASKT 260 Query: 227 NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 H + G + + A+ + Q ++ LEPGR L+ G+ Sbjct: 261 FSHFYPYYQSPTGADMLNAILESSIGNISLANKLID----TQIQLYLEPGRALLDGAGMT 316 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV--GPI 344 V V KK+ + V + + +V R + G Sbjct: 317 VFPVQGFKKNDEHGIVTVAGLSMSLSEQWKNSEFLPTPILVQRGQLRPQNPVFVAIGGSS 376 Query: 345 CETGDFIALN-RKIA-LPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMV--NGSQF 398 C D + K+ PR GDL+ T Y ++ ++ L P+++V +F Sbjct: 377 CMEYDMLTWRKIKLPAEPRYGDLIIYPNTAGYQMDKNESEFHQLPLPPKVVVTQQDGEF 435 >gi|330446227|ref|ZP_08309879.1| carboxynorspermidine decarboxylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490418|dbj|GAA04376.1| carboxynorspermidine decarboxylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 369 Score = 79.5 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 53/380 (13%), Positives = 106/380 (27%), Gaps = 26/380 (6%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 + N + ALK S V + G E+R Sbjct: 2 IDEQKLINNLEQAKKLKQLSGVKLVLALKCFSTWGVFDVMKPYLDGTTSSGPFEVRLGAE 61 Query: 92 APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVN 151 E +S D D+ FN S+ + + + R+N Sbjct: 62 -KFGGETHAYSVGYSQEDVEDVLQYCNKIIFNSISQLQAHRHLADGKA-----SVGLRLN 115 Query: 152 PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFH 211 P I+ P Q L + L +D + + +S Sbjct: 116 PGISCAGQD----------LADPARQFSRLGVQENLLTDELFDALDGAMFHMNCENKSAD 165 Query: 212 KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI 271 LL + ++ + + +GGG+ + A+ + + ++ Sbjct: 166 AFITLLDSIAERFGRYLSKLDWVSLGGGVFFTWPD----YELEKLATALKAFAERFSVQL 221 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 LEPG ++ LV V+ I ++ KT ++ + +Y+ + + Sbjct: 222 YLEPGEAIITQTTDLVVTVVDIVENEMKTAIVDSATEAHRLDTLIYN----EPATITESS 277 Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 + I C GD + G L+I + Y V+ +N + Sbjct: 278 EEGSHEYVIGSCSCLAGDQFCVTSFEQPLTIGQKLHIADSAGYTMVKLNWFNGLRMPSIY 337 Query: 392 MVN-GSQFHIIRPRMTFQEL 410 + ++ + Sbjct: 338 CRRSNGNIEKLNE-FSYDDF 356 >gi|156977279|ref|YP_001448185.1| diaminopimelate decarboxylase [Vibrio harveyi ATCC BAA-1116] gi|156528873|gb|ABU73958.1| hypothetical protein VIBHAR_06065 [Vibrio harveyi ATCC BAA-1116] Length = 418 Score = 79.5 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 63/373 (16%), Positives = 121/373 (32%), Gaps = 16/373 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQAVIKTLAHL 74 L K + +TP YS I + V + +KA+ V+KTL + Sbjct: 10 DLIKFSREYKTPSIIYSEVIISEQCAAIVEPISQSPMEGRVFFPIKASYEPIVLKTLVNN 69 Query: 75 GS-GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 G +++S EL+ A ++FSG+ + L + S ++ + Sbjct: 70 SISGFEVMSYHELKHIRALFGYQYPLIFSGLCPDECTLRLLCFE-QDILVINSLNDCFRV 128 Query: 134 NQRAVSLGKKAPIAFRVNPDINA-NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 S + I + N+ + + ++++ G+ Sbjct: 129 VDLLQSSTDGSRITLLLRISFPCLNSEIGYNGRNSKLGIIAYSNEMYRCLELLERHEGIN 188 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + G+ H + K + L + S+ + GG + + Sbjct: 189 LEGIHCHQLIHESSASEYRKMIHQMAKLIDSIESSTSFKLAVCDIGGGLESMPNIKTRSV 248 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 ++ + +I EPGR LV GI VTKVI + +DV N + Sbjct: 249 VKQICQEFNEILPDR--SLIFEPGRALVNSGGICVTKVIGQRVRTQTHHCTVDVGSNLLV 306 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA------LNRK-IALPRPGDL 365 + + I+N + + + ++ N ++ P+ G L Sbjct: 307 PTSSKRYHIIHEDIINSEASLKEASCAV--KVTFSDRVLSPANTIEDNVMMLSPPQVGSL 364 Query: 366 LYIEKTGAYGAVQ 378 L I GAY + Sbjct: 365 LLIGNAGAYTSAL 377 >gi|144897740|emb|CAM74604.1| ornithine decarboxylase [Magnetospirillum gryphiswaldense MSR-1] Length = 328 Score = 79.5 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 54/318 (16%), Positives = 101/318 (31%), Gaps = 13/318 (4%) Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D S GE+ A+ + + + + F V+S +EL + + Sbjct: 3 HFDCASAGEVALVRHTLPRAQIHFMHPIKARSAIREAWERHDVRDFVVDSAAELGKVIEE 62 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + I R+ + KFG +L A+ + G G+ Sbjct: 63 TRHRPGRLGIIVRLALPKGSA------RYDLSGKFGADRDDAVALLRMAAAVAGR--VGI 114 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GSQ ++ +A L ++ + + Sbjct: 115 SFHVGSQCCDPAAWTRALDLTAEVLAAYGRPVDIVDVGGGFPVSYPDVTPPPLADFFAAI 174 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 A+ + ++ EPGR LVA LV ++ + + +++D P Sbjct: 175 AAGFARLNLPAATQLWCEPGRALVAPGQSLVVRIEGRRGDMLYINDGIYGSLSDAGAPGF 234 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYG 375 + +N GP C++ D + + R GD + I + GAYG Sbjct: 235 --RFPCRLIRLNGESVAADQPFAFFGPTCDSADRMNGPFLLPADSREGDWIEIGQLGAYG 292 Query: 376 AVQSGTYNSRLLI--PEI 391 A +N L+ E+ Sbjct: 293 ASLRTGFNGFDLVLSAEV 310 >gi|330937820|gb|EGH41666.1| ornithine decarboxylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 171 Score = 79.5 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 2/125 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I K Y F+ V YA+KAN VI L GS DI Sbjct: 21 ADKQETPFVVIDTDIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKEKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S EL + L+ V ER+ + K +I + G+ F +SE++L+ + + A Sbjct: 79 SIYELDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGSK 138 Query: 142 KKAPI 146 I Sbjct: 139 VYVRI 143 >gi|119612258|gb|EAW91852.1| antizyme inhibitor 1, isoform CRA_b [Homo sapiens] Length = 346 Score = 79.5 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 104/292 (35%), Gaps = 14/292 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKP--FYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 98 VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T I + KFG + L A L V+I GV H+ S + + Sbjct: 157 ---------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELD-VQIIGVKFHVSSACKESQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +D+GGG L + Sbjct: 207 VYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVIS-PLLDIYFPEGSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 KII EPG + V+ L +I+ K + F +Y Sbjct: 266 VKIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMN 317 >gi|170596393|ref|XP_001902748.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Brugia malayi] gi|158589386|gb|EDP28402.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain containing protein [Brugia malayi] Length = 475 Score = 79.5 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 66/368 (17%), Positives = 117/368 (31%), Gaps = 36/368 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL-AHLGSGLDIVSEGEL 86 PF+ + ++ + D YAL+ NS+ ++K L + GL + E+ Sbjct: 57 PFFVMNVELVDDILENWFKKMP--DIKPYYALRCNSDNVLLKLLTRNTNMGLCCSNRYEV 114 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A+ V +RI++ T I A + I +E+E +LK + Sbjct: 115 EMAMK-FVNVDRIIYRNPLWTRGSIRHAKECDIQTVIIETEDDLKRFAMYYPEADIILRV 173 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 T + + + I + L A +I G+ + + Sbjct: 174 -----------TMDRKIISDPLMEDNLDIEKAIHLLRTAKNSSV-RIRGISLSVRLVCAT 221 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + A R L GH + +DVG G D + + Sbjct: 222 PMLYSYAIAQCRRLFDIGLEVGHKMDILDVGDGFPCMTTVDGLSFDQIAKSLNVALAHFF 281 Query: 267 LQCKI-----ILEPGRFLVADVGILVTKVISIKKSADK-------------TFVILDVAM 308 I EP + A L+T+VI+ + ++ Sbjct: 282 PSKFFKDLKIIAEPSYYFAAFPFSLITRVINKRFIDGSFLTNDESDAGAVGYIYQINEGF 341 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP-ICETGDFIALNRKIALPRPGDLLY 367 L + + G++ + HA I+GP C+T D I ++ + GD L Sbjct: 342 YGAFGCKLLTHRNPTCSPLIFFGEKRNTHAAIIGPESCDT-DVILSLTRLPPLQVGDWLI 400 Query: 368 IEKTGAYG 375 GAY Sbjct: 401 WHHMGAYT 408 >gi|23379721|gb|AAM76603.1| ornithine decarboxylase 1 [Saguinus oedipus] Length = 200 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 13/209 (6%) Query: 33 STTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAA 92 I K +L + A YA+K N ++A++ TLA +G+G D S+ E++ + Sbjct: 2 DLGDILKKHLRWLKALPR--VTPFYAVKCNDSRAIVNTLAAIGTGFDCASKTEIQLVQSL 59 Query: 93 PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 60 GVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA----- 114 Query: 153 DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK 212 T + + KFG + L A L + + GV H+GS E+F + Sbjct: 115 -----TDDSKAICRLSVKFGATLKTSRLLLERAKEL-NIDVIGVSFHVGSGCTDPETFVQ 168 Query: 213 AFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A R + G ++ +D+GGG Sbjct: 169 AITDARCVFDMGAEVGFSMYLLDIGGGFP 197 >gi|73949909|ref|XP_863982.1| PREDICTED: similar to ornithine decarboxylase-like protein isoform 2 [Canis familiaris] Length = 365 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 104/314 (33%), Gaps = 28/314 (8%) Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + VPA +IV++ K I +I A + G+ + ++E EL + + S Sbjct: 1 MELVQRIGVPASKIVYANPCKQIAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLC 60 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 IA T S KFG + L A V++ GV H+GS Sbjct: 61 IA----------TDDSHSLSHLSFKFGASLKSCRHLLENAKRS-HVEVVGVSFHVGSGCP 109 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQY 263 + ++ ++ R + + GH + +D+GGG + R + + + Sbjct: 110 DLHAYTQSIADARLVFEMGAELGHRMHILDLGGGFPGLEGAKVRFEEIATVINSALDLYF 169 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAM 308 I+ GR+ V L +I+ K + + + Sbjct: 170 PEGCGVDILARLGRYYVTSAFTLAVSIIAKKEVLLDQPGREEETGSTPKTIVYHLGEGVY 229 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 F + + ++ + + GP+ + D +A + GD L Sbjct: 230 GIFNSVLFDNTCPTPILQKKSSTEQPLYSSSLWGPVADGSDCVAEGLWLPQLHVGDWLVF 289 Query: 369 EKTGAYGAVQSGTY 382 E GAY + Sbjct: 290 ENMGAYTVGMGSLF 303 >gi|198427499|ref|XP_002125033.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Ciona intestinalis] Length = 315 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 77/194 (39%), Gaps = 3/194 (1%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + G+ H GS D E+ ++L SN +++ ID+GGG + Sbjct: 84 NLVGICFHPGSGSDSSEATRNCLHRCKELYDFATSNEIHLKIIDIGGGF--VCGENFIEI 141 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 S A++ + +I EPGRF V + VT V D+ + + Sbjct: 142 SEQVTATVGKLFPPETGVTVIAEPGRFFVKNAFGFVTPVHGKAIVGDRAKYYIGAGVFST 201 Query: 312 MRPTLYDAYHEINYIVNPAGDRLH-IHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 TL++ + I ++ ++ + + GP C D + N + + GD + + Sbjct: 202 FCMTLFEKFERIPENLSRKAEKCDLYSSTVYGPTCAGVDVVLNNILLPEAQIGDWWFFDN 261 Query: 371 TGAYGAVQSGTYNS 384 GAY ++ S +N Sbjct: 262 MGAYSSLVSLGFNG 275 >gi|255324705|ref|ZP_05365819.1| decarboxylase [Corynebacterium tuberculostearicum SK141] gi|255298180|gb|EET77483.1| decarboxylase [Corynebacterium tuberculostearicum SK141] Length = 462 Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 69/397 (17%), Positives = 120/397 (30%), Gaps = 42/397 (10%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT--MVCYALKANSNQAVIKTLAHLG 75 + L +P + + N NA D V +A KAN + G Sbjct: 35 VSALTSRYGSPVNALNPAPLRHNAQELLNAGASHDVETQVFFARKANKALCFVDAARDAG 94 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G+D+ SE ELR+ L V ERI+ S KT + LA+ G + +S +E + Sbjct: 95 LGVDVASENELRQVLDRGVAPERIILSAAIKTDGLLRLAVSRG-VTISCDSRAESHRIAA 153 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A L A +A R+ PD ++ + + ++ + + + Sbjct: 154 IARDLDTTARVAPRLAPDPDSLPPTRFGERLPAWRQAEWPQELRVVGVHVHLHGYSEADR 213 Query: 196 --------------------VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 D + + L + + Sbjct: 214 RTALAEAIALIEHVRALGQPADFIDIGGGVPMSYLESREQWEYYLERIASQRTGTGKPFT 273 Query: 236 VGGGLGIAYHSDHRPPSSSDY-----------ASLIHQYFGNLQCKIILEPGRFLVADVG 284 + + P+ + + LEPGR L+ G Sbjct: 274 WKADPLSNTYPFWQEPTRGQWLDQLLSGEVPGYGTAGTALRERDIALHLEPGRSLLDGCG 333 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI--NYIVNPAGDRLHIHAD--I 340 +++ +V +K+ +D +I R D + PA + + Sbjct: 334 VILAEVSFLKERSDGLPLIGVAMNRTQCRTAADDILLDPLLVPTAGPAKEISREPRTGFV 393 Query: 341 VGPICETGDFIALNRKI--AL-PRPGDLLYIEKTGAY 374 VG C D + L R++ GD L I T Y Sbjct: 394 VGAYCIE-DEVILRRELDFPDGIAVGDTLAIPNTAGY 429 >gi|213620703|ref|ZP_03373486.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 156 Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 9/159 (5%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 KA SN +++ + G +D VS GE+ RALAA + + T D ID A + + Sbjct: 54 KACSNIHILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC-PDDIVFTADVIDAATLARV 112 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANT 158 ++ + + + + + RVNP Sbjct: 113 SELHIPVNAGSVDMLTQLGQVSPGHRVWLRVNPGFGHGH 151 >gi|312082719|ref|XP_003143560.1| pyridoxal-dependent decarboxylase [Loa loa] gi|307761276|gb|EFO20510.1| pyridoxal-dependent decarboxylase [Loa loa] Length = 480 Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 69/368 (18%), Positives = 119/368 (32%), Gaps = 36/368 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL-AHLGSGLDIVSEGEL 86 PF+ + ++ + D YAL+ N + ++K L + GL + E+ Sbjct: 57 PFFVMNVELVDDILENWFKKMP--DVKPYYALRCNPDNILLKLLTRNTDMGLCCSNRYEV 114 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A+ +RI++ T I A + GI +E+E +LK + + Sbjct: 115 EMAMKIV-NVDRIIYGNPLWTRGSIRHAKECGIQTVIIETEDDLKRFTTYYPEVSIILRV 173 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + T K VKI GV + + S Sbjct: 174 TMDRKLVSDPFTEDNFDVEKAVSLL------------RTIKDSSVKIKGVSLSVRSICTT 221 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + A R L GH + +DVG G +D + + Sbjct: 222 PTMYLYAIAQCRRLFDTGLEVGHKMDVLDVGDGFPSMSATDGISFDQIAKSLQVALALFF 281 Query: 267 L-----QCKIILEPGRFLVADVGILVTKVISIKKSADK-------------TFVILDVAM 308 KII EPG + A L+T+VI + ++ Sbjct: 282 PSKLFKDIKIIAEPGPYFAASTFSLITRVIDKRLIDGSFLTNDESDAGTVGYVYQINEGF 341 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI-CETGDFIALNRKIALPRPGDLLY 367 L + I + G++++ +A I+GP C+T D + ++ + GD L Sbjct: 342 YGAFGCKLSTRRNPICSPLMIFGEKMNTYAAIIGPEPCDT-DIVLPLTRLPPLQVGDWLI 400 Query: 368 IEKTGAYG 375 GAY Sbjct: 401 WHDMGAYT 408 >gi|83944546|ref|ZP_00956997.1| probable diaminopimelate decarboxylase [Sulfitobacter sp. EE-36] gi|83844583|gb|EAP82469.1| probable diaminopimelate decarboxylase [Sulfitobacter sp. EE-36] Length = 475 Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 71/451 (15%), Positives = 138/451 (30%), Gaps = 75/451 (16%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAV 67 L + L+ L P S +N ++ G+ + +A KAN + Sbjct: 27 ELFQDRPRLDALTDRFGAPLNIQSVDPFRRNIAQLTDCVTDYGLPFLPMFARKANKCLSY 86 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ +G G+D S E+ + L +P +RIV + K + G +++E Sbjct: 87 VQAARDMGIGIDTASHAEVEQCLEQGLPGDRIVCTAAVKDRALM-TLCVGGGVTVILDNE 145 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 EL+ L A K + R+N T K +FG P+ Q+ +L A + Sbjct: 146 DELELLEDVAEGATKPVSVGLRLNGFERDGT-------KLYSRFGFPLTQVPTLAARIAA 198 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 +++ G+ H+ E A L +++ + +D+GGG+ + Y D Sbjct: 199 SETLRLDGLHFHL--NGYSAEDRIAAILQTLPLIHKIKGDSTAPFFLDIGGGIPMNYLDD 256 Query: 248 HRPPSSSDY------------------------------------------ASLIHQYFG 265 + + Sbjct: 257 AAEWETWLAELDRALIGDRDPITQHNDGLGRKVGGEGKVDSYPVAQTLVQEDWMRRILDH 316 Query: 266 NLQCKIILEPGR------------FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + R L+ G+ + +V K+ + T VI R Sbjct: 317 MADGQTVAAHLRDAHISLRCEPGRSLLDGCGMTLARVAFCKRDSAGTPVIGVQMNRTQSR 376 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK-IAL-PRPGDLLYIEKT 371 + + + P + I + G C +++ + + GDL+ T Sbjct: 377 SGFAEFALDPLMVPAPGPRKGPIEGYLAGTYCTESEWLTRRKMSFPQGVKAGDLMVFPNT 436 Query: 372 GAYGA----VQSGTYNSRLLIPEIMVNGSQF 398 Y +S + L + V Sbjct: 437 AGYLMHFLESRSHQF---PLARNVFVTEGNA 464 >gi|330901814|gb|EGH33233.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 185 Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 60/174 (34%), Gaps = 11/174 (6%) Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKII--LEPGRFLVADVGILVTKVISIKK 295 GG + + + + + G I EPGRF+ A G +V+ K Sbjct: 17 GGGIGVDYLNSQQFDWQRLCRYLEKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKT 76 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINY--IVNPAGDRLHIHADIVGPICETGDFIAL 353 S + F++ + F P H + + + D IVG +C D ++ Sbjct: 77 SHGEHFLVCRGGTHQFRLPVAQSHDHPVIHLPTAPQSTDSSEQAYTIVGQLCTPKDVLSR 136 Query: 354 NRKIALPRPGDLLYIEKTGAYGA--VQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 + + GDLL + GAYG + + + V + R R Sbjct: 137 RQPLKGVNIGDLLVLPLAGAYGYNISHA-DFLCHPRPSQHFVRNGE----RVRQ 185 >gi|242001342|ref|XP_002435314.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215498644|gb|EEC08138.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 391 Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 113/366 (30%), Gaps = 23/366 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD-IVSEGELR 87 F+ +E + + ++ + + EL Sbjct: 30 FFICDLNDLESKVKLWRRELPRVTPFFG------ERLSLFCLSKRYRLSFSFLFFQNELE 83 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L V ERI+++ K + A + G+ +S EL + L + + Sbjct: 84 AVLDIGVSPERILYASPVKCSSHLKFASERGVTLMAFDSVEELAKIKDENARLLLRVDVV 143 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + KFG H++ + A + ++ G+ H+ S Sbjct: 144 ------------DNTNEVSTLTKFGTSAHEVEGVLNLAFKMGR-RVVGILFHVKSAHHDP 190 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS--LIHQYFG 265 ++F A K + G + + +GGG + + + Sbjct: 191 DTFTLAVKHAKTAFDIGTRLGFQMTVLSIGGGFLGGTRMQDSFLKVCEAIRSAIDIHFPP 250 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + +II EPG+FLV LV KV+ +K + K L Sbjct: 251 SEGLEIIAEPGQFLVTSAYSLVVKVLHKRKRSAKIGGERGCLQTGIEVGRLTKLCRPAFR 310 Query: 326 IVNPAGDRL-HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 V P DR + + G C GD + + G+ L I+ GAY ++ +N Sbjct: 311 YVQPPFDRPLDVLTTVWGSSCHPGDCVIAGELLFDMSIGEWLLIDNMGAYAVARASGFNG 370 Query: 385 RLLIPE 390 P Sbjct: 371 HGFPPV 376 >gi|32471477|ref|NP_864470.1| diaminopimelate decarboxylase [Rhodopirellula baltica SH 1] gi|32443318|emb|CAD72149.1| hypothetical 49.9 kDa protein Y4YA-putative diaminopimelate decarboxylase [Rhodopirellula baltica SH 1] Length = 489 Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 72/431 (16%), Positives = 133/431 (30%), Gaps = 68/431 (15%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAV 67 L A++ +++L +P ST + N N + + +A KAN Sbjct: 45 ELAADSDRVKQLIEFHGSPVNVLSTDPMRSNIKDLQNVASQASVPLQIHFARKANKCAEF 104 Query: 68 IKTLAHLGSGLDIVSEGE----LRRALAAPVPA-ERIVFSGVGKTIDEIDLALQSGIYCF 122 ++T G D+ SE E L P + + + + Sbjct: 105 VRTGLMESIGFDVASEFEKQQTLDELYRLPQHPFDSPIVCTAAVKPVSLIRSCVLSNIVL 164 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 +++E EL TL + LG AP A H +FG+P +++ L Sbjct: 165 VIDNEDELTTLRETLAHLGSTAPKARIAFRLQ----HCSAKFPDLPSRFGMPANELTLLA 220 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIES--FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 P +++ G+ H+ +Q D+ ++R GH + +D+GGG Sbjct: 221 RSLCDEPRIQVVGIHFHVHRSDEQFSPSFTKALIDDALDVVDRVREIGHAVAWLDIGGGF 280 Query: 241 GIAYHSDHRPPSSS---------------------------------------------D 255 + Y + Sbjct: 281 PVNYLCHQKHWQRFLKEAHTFTESSGRFEANRKLTWNQRPLKDIDPTWQPMNAADWLRAV 340 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 S + + + EPGR L+ G+ + +V+ +K+ ++ +I + + R T Sbjct: 341 LTSSLAYEINRRELILKCEPGRALLDGCGLTIAEVLFVKRDQNQNHLIGLMMNSSQCRTT 400 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD--------IVGPICETGDFIALNRK-IAL-PRPGDL 365 D + I + VG C +++ R GD Sbjct: 401 RDDFLVDPIVISASNESAKPTNQTDHAEIEGYFVGGYCTESEYLMQRRFRFPRGISRGDF 460 Query: 366 LYIEKTGAYGA 376 + I T AY Sbjct: 461 VLIPNTAAYQM 471 >gi|327540825|gb|EGF27386.1| diaminopimelate decarboxylase [Rhodopirellula baltica WH47] Length = 506 Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 73/415 (17%), Positives = 134/415 (32%), Gaps = 59/415 (14%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHL 74 +L +P + +N + G+D V +A KAN + Sbjct: 59 NLFDWVETYGSPLNLVRPRTMRRNVEELNAVARERGLDFRVFFARKANKCLGFVDEAIES 118 Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+D SE ELR+ L VPA+ ++ + K+ ID C V+++ EL+ + Sbjct: 119 NFGVDTASENELRQCLQQCVPAKDLICTAAIKSDSLID-LCLQQQVCIAVDNDDELQIIV 177 Query: 135 QRAVSLGKKAPIAFR--------VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 RA LG++A IA R V + +P+ + Sbjct: 178 DRANELGRRARIALRLGGFRHEGVKLATRFGFDVDRDRDLPQRLTSLPVMVQGIHFHLDG 237 Query: 187 TLPGVKISGVDMHIGS-----------------QIDQIESFHKAFKLLRDLTQQLRSNGH 229 G ++S + + + + + + + R+ Sbjct: 238 YDAGQRVSALSVAMEWVERLRAVGQPVEFIDMGGGFPMSYLEEHRQWATFWKEHRRALLG 297 Query: 230 NIQHIDVGG-------------GLGIAYHSDHRPPSSSDYASLIHQYFGNL--------- 267 + G G Y RP + A ++ Sbjct: 298 ERDTLTYHGHGLGLAVEGGRVVGQPKMYPFFQRPVRGNWLAGVLDSRIEGKAIANRLLEL 357 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH-----E 322 ++ EPGR ++ G+ V +V K++A+ ++I R + D Sbjct: 358 NVQLRCEPGRSILDGCGLTVARVEFRKQNAEGDWLIGLSMNRTQCRTSSDDFLVDPILVP 417 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAY 374 + A + + +VG C + I+L RK+ P + GDL+ T Y Sbjct: 418 KQSCFDRATETKPMSGYLVGAYCTESELISL-RKMQFPSGVQRGDLIAFPNTAGY 471 >gi|225445350|ref|XP_002281602.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 240 Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 55/161 (34%), Gaps = 4/161 (2%) Query: 229 HNIQHIDVGGGLGIAYHSDHRP-PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 + +D+GGG + + KI+ EPGRF LV Sbjct: 70 PPMHVLDIGGGFQESPTFHEIAAVIKEAINDYFPSSETSEDLKIMAEPGRFFAETAFTLV 129 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI---VNPAGDRLHIHADIVGPI 344 + +I + +K +D + YD + + ++ + + GP+ Sbjct: 130 SNIIGKRVRGEKREYWIDDGIYGSFNLPAYDKSSMMVKPLLGGSEWMNKAKFCSTVFGPM 189 Query: 345 CETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 C++ D + ++ D+L GAY A +N Sbjct: 190 CDSMDMVLAESQLPELHMNDVLVFYNMGAYTASAGTRFNGF 230 >gi|325929653|gb|ADZ45335.1| pyridoxal-dependent decarboxylase [Streptomyces sp. NRRL 30471] Length = 388 Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 114/355 (32%), Gaps = 25/355 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFD---GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 TP + I+ + + + +++KAN ++AV+ LA G + S Sbjct: 34 TPTIVHDPDGIDAEITAIRHGLSLLHVPGSRLLFSVKANRSRAVLTHLASRNIGAAVSSV 93 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A A + + G + ++ +SG + + L Sbjct: 94 AEDRAAAEAGMSPR--YATSPGLSGADLIELHKSGTHLDIDSIDQLAAVPRHSETGLRLS 151 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 PI + + +FGI + L K+ V +H + Sbjct: 152 VPI-----------PRESTARDMPWSRFGIRWEDAGERGKAQAVLKERKLRVVRLHAHVR 200 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + + + +++GGG+ +H + + Sbjct: 201 DIGGVEDVRPLGRALAHAAR---DLPEVDEVNIGGGMIRLFHHNQEAIAPVFECLAEELA 257 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +++ EPG LV G L+T+V+S+++ + V +D + + + + Sbjct: 258 RAGRPLRVLAEPGAQLVTSHGYLITRVLSVRRHEGRQSVTVDASAWNLAGWSRFHLAM-- 315 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQ 378 A D+ GP C D PGDL+ + GAY Sbjct: 316 ----TGADRGERWTTDLTGPTCYEKDLWFAGMATDRIEPGDLVVLRGAGAYVGSM 366 >gi|297738878|emb|CBI28123.3| unnamed protein product [Vitis vinifera] Length = 180 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 9/125 (7%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI------ 323 KI+ EPGRF LV+ +I + +K +D + YD + Sbjct: 41 KIMAEPGRFFAETAFTLVSNIIGKRVRGEKREYWIDDGIYGSFNLPAYDKSSMMVKPLLG 100 Query: 324 ---NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 + + GP C++ D + ++ D+L GAY A Sbjct: 101 GSEWMNKAKFCSTAKFSSTVFGPTCDSTDMVVAESQLPELHMNDVLVFYNMGAYTASAGT 160 Query: 381 TYNSR 385 +N Sbjct: 161 RFNGF 165 >gi|109495997|ref|XP_001074661.1| PREDICTED: ornithine decarboxylase 1 [Rattus norvegicus] gi|293341208|ref|XP_002724847.1| PREDICTED: ornithine decarboxylase-like [Rattus norvegicus] Length = 186 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 30/94 (31%) Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + + D F A+ + P D + + I P C+ D I + Sbjct: 40 MYYVNDGVYGSFNCILYDHAHVKALLQKRPKPDEKYYSSSIWRPTCDGLDRIVERCSLPE 99 Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 GD + E GAY + T+N V Sbjct: 100 MHVGDWMLFENMGAYTVAAASTFNGFQRPNIYYV 133 >gi|291510152|gb|ADE10032.1| unknown [Tremella fuciformis] Length = 417 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 105/274 (38%), Gaps = 16/274 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ +A+ + + + G + YA+K N + V+ L+ LG D S E+ + Sbjct: 103 FFAADLSAVYEAVQMWRASALGERVEIFYAIKCNPSPVVLHFLSLLGLSFDCASASEVNQ 162 Query: 89 --ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 +L A RI+F+ K I A Q G+ ++ EL + + + I Sbjct: 163 VLSLPAKPDPRRIIFANPCKAPSHIRQAAQGGVDMMTFDNADELYKVKRTHPTAKLVLRI 222 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 T S + K+G P+ L A A L + + GV H+GS Sbjct: 223 L----------TDDSKSLCRLGLKYGAPLSTCPGLLATAKQLG-LNVVGVSFHVGSGCKD 271 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 F AF + + + G++ +D+GGG + + Sbjct: 272 PAQFSDAFWRAKKVFNMAKEAGYDFSLLDIGGGFERETFAQMSEVVRDAL---DVYFPAA 328 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 ++I EPGRFLV+ L T +I+ +++ Sbjct: 329 SGVRVIAEPGRFLVSSAFTLATSIIARRRAHMPD 362 >gi|282910112|ref|ZP_06317920.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282326178|gb|EFB56483.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus WW2703/97] Length = 228 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 3/194 (1%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ + Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 L PA I+F G GKT +E+ A+ G+ +VES EL+ LN K I R Sbjct: 80 L-VFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLR 138 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 VN + + + +FGI ++ + A +P + + G H S Sbjct: 139 VNLAGPFP-NATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNL 197 Query: 210 FHKAFKLLRDLTQQ 223 KL + Sbjct: 198 HVDVVKLYFKKQRH 211 >gi|119627883|gb|EAX07478.1| arginine decarboxylase, isoform CRA_j [Homo sapiens] Length = 320 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 105/314 (33%), Gaps = 28/314 (8%) Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + +PA +I+ + K I +I A + GI + ++E EL + + S Sbjct: 1 MELVQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLC 60 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 IA T S KFG+ + L A V++ GV HIGS Sbjct: 61 IA----------TDDSHSLSCLSLKFGVSLKSCRHLLENAKKH-HVEVVGVSFHIGSGCP 109 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQY 263 +++ ++ R + + GH + +D+GGG + R + + + Sbjct: 110 DPQAYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYF 169 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAM 308 I E GR+ V + +I+ K S + + + Sbjct: 170 PEGCGVDIFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVY 229 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 F + P+ ++ + + GP + D +A + GD L Sbjct: 230 GIFNSVLFDNICPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVF 289 Query: 369 EKTGAYGAVQSGTY 382 + GAY + Sbjct: 290 DNMGAYTVGMGSPF 303 >gi|168822845|ref|ZP_02834845.1| MccE [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205340846|gb|EDZ27610.1| MccE [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320089196|emb|CBY98949.1| ribosomal-protein-serine acetyltransferase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 588 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 60/383 (15%), Positives = 124/383 (32%), Gaps = 21/383 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PF+ + + + + A D ++ ++K+ S ++ +A G ++ S E Sbjct: 27 PFFIFDADSALERARHLTAACKEYFPDAVIAVSVKSCSLGIFLRLIAEEGLSAEVCSADE 86 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + AL A +RI+ G K +++ LAL G + EL + +K Sbjct: 87 FKLALKAGFTGDRIILDGPYKNSEDLSLALDKGALVHIDSA-HELSEIIGLMSGYNQKIG 145 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R++ + + +E + I ++ P + + G +H GS ++ Sbjct: 146 VGVRLSHIYSDTQRSRFGVTAEEFRDEIVP--------LLTSCPDISLRGFHLHTGSNLE 197 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + G ++ + + + + I Sbjct: 198 NPSKVSDCLRDWLPFLVENMPEGGHLDMGSGFPADSFSPVAAVPTVEPAAFFRDIVSVLS 257 Query: 266 NLQ------CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 K+I EPGR L D G + K +S+K D + ++ +N + Sbjct: 258 EYDPALIQKWKLIFEPGRTLSEDHGYAIGKTVSVKNRYDSEVIQTNLGINWIPSVHNWHH 317 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 D + G C D + + + L I GAY + Sbjct: 318 SLLPLGHNEHIPDDTTQ--ILAGFNCFENDCLFPRGPLN-LKKNQLFIIRGCGAYDLQTA 374 Query: 380 GTYNSRLLIPEIMVNGSQFHIIR 402 + +R P + + R Sbjct: 375 NEW-TRTRPPVYALLNQEIITAR 396 >gi|16552627|dbj|BAB71356.1| unnamed protein product [Homo sapiens] gi|21754323|dbj|BAC04489.1| unnamed protein product [Homo sapiens] gi|119627878|gb|EAX07473.1| arginine decarboxylase, isoform CRA_e [Homo sapiens] gi|119627887|gb|EAX07482.1| arginine decarboxylase, isoform CRA_e [Homo sapiens] Length = 365 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 105/314 (33%), Gaps = 28/314 (8%) Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + +PA +I+ + K I +I A + GI + ++E EL + + S Sbjct: 1 MELVQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLC 60 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 IA T S KFG+ + L A V++ GV HIGS Sbjct: 61 IA----------TDDSHSLSCLSLKFGVSLKSCRHLLENAKKH-HVEVVGVSFHIGSGCP 109 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQY 263 +++ ++ R + + GH + +D+GGG + R + + + Sbjct: 110 DPQAYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYF 169 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIK---------------KSADKTFVILDVAM 308 I E GR+ V + +I+ K S + + + Sbjct: 170 PEGCGVDIFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVY 229 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 F + P+ ++ + + GP + D +A + GD L Sbjct: 230 GIFNSVLFDNICPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVF 289 Query: 369 EKTGAYGAVQSGTY 382 + GAY + Sbjct: 290 DNMGAYTVGMGSPF 303 >gi|255539080|ref|XP_002510605.1| arginine/diaminopimelate/ornithine decarboxylase, putative [Ricinus communis] gi|223551306|gb|EEF52792.1| arginine/diaminopimelate/ornithine decarboxylase, putative [Ricinus communis] Length = 97 Score = 77.9 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 23/82 (28%) Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 ++ + D T N + + GP C+ D + + Sbjct: 1 MNCILYDHATITCTPLACSSNRANPTCKGLRTHSSTVFGPTCDALDTVLKGHPLPELHIN 60 Query: 364 DLLYIEKTGAYGAVQSGTYNSR 385 D L GAY A +N Sbjct: 61 DWLVFPNMGAYTAAAGSNFNGF 82 >gi|296141953|ref|YP_003649195.1| Orn/DAP/Arg decarboxylase 2 [Tsukamurella paurometabola DSM 20162] gi|296030087|gb|ADG80856.1| Orn/DAP/Arg decarboxylase 2 [Tsukamurella paurometabola DSM 20162] Length = 459 Score = 77.9 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 69/426 (16%), Positives = 134/426 (31%), Gaps = 41/426 (9%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 L +L +P + + + A +D V +A KAN A+++ G Sbjct: 40 LHQLIEEHGSPVNVINPAPLAGHAGELIAAAQEARVDLRVYFARKANKALALVEAALAAG 99 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G+D+ SE ELR+ LA +RI+ + K + LA+ SG ++++ EL L + Sbjct: 100 HGIDVASEQELRQVLAFNPQPDRIILTAAVKPNALLKLAVNSG-VVISIDNGDELAALVR 158 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + + G +++ ++ A + + Sbjct: 159 VIAECKHREDVPVALRIAAELPGAAPSRFGMAQEQIREILNNFPGQLALSGFHFHLHGYS 218 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + + ++ A T G ++++D S S+ Sbjct: 219 AEHRSEALAQALDLIATARHQQHRPTFIDIGGGIPMRYLDTPATWDAYQQSTKSSDLSAF 278 Query: 256 YASLIHQYFGNLQC--------------------------KIILEPGRFLVADVGILVTK 289 +A+ + + ++ EPGR L+ G+ V + Sbjct: 279 WAAKAPENVYPMWQELVRGAWLASVLSAPGLAQRIADAGIRLHAEPGRCLLDGCGLTVAR 338 Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAY-HEINYIVNPAGDRLHIHADIVGPICETG 348 V K+ +D T++I +R D I I +VG C Sbjct: 339 VEFRKQRSDGTWLIGLAMNRTQLRSAADDFILDPILIPAPERAPTPPISGFLVGAYCIEA 398 Query: 349 DFIALNR-KIAL-PRPGDLLYIEKTGAYGA---VQSGTYNSRLLIPEIMVNGSQFHIIRP 403 + I R GDL+ T Y + L I++ ++ Sbjct: 399 ELITRRRITFPEGVAVGDLIAFTNTAGYLMHILESASH--QIPLAHNIVLKEGRW----R 452 Query: 404 RMTFQE 409 R + Sbjct: 453 RDQIDQ 458 >gi|331011410|gb|EGH91466.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 213 Score = 77.9 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 2/114 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A +TPF T I K Y F+ V YA+KAN VI L GS DI Sbjct: 21 ADKQETPFVVIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIA 78 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 S EL + ++ V ERI + K +I + G+ F +SE++L+ + + Sbjct: 79 SIYELDKVMSCGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAK 132 >gi|68537075|ref|YP_251780.1| putative diaminopimelate decarboxylase [Corynebacterium jeikeium K411] gi|260579419|ref|ZP_05847301.1| diaminopimelate decarboxylase [Corynebacterium jeikeium ATCC 43734] gi|68264674|emb|CAI38162.1| putative diaminopimelate decarboxylase [Corynebacterium jeikeium K411] gi|258602548|gb|EEW15843.1| diaminopimelate decarboxylase [Corynebacterium jeikeium ATCC 43734] Length = 472 Score = 77.9 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 75/439 (17%), Positives = 135/439 (30%), Gaps = 72/439 (16%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PF+ + N F+ +D V +A KAN + ++ +A G+D+ S E Sbjct: 35 PFHVLYPAQLRTNLRDFATTAQDMNVDCTVFFARKANKAECWLQEIAAADQGVDVASGPE 94 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L ALA + ++V +G K + + L ++ G EL+ + Sbjct: 95 LVGALAGGIRGTKLVITGAEKADNLLWLGIRHGCTIAADSP-GELQRILDITRRETSAHH 153 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL-PGVKISGVDMHIGSQI 204 + + + E +FG + + + L V I G H+ Sbjct: 154 TDGHTRVLLR-----ILPAEQTESRFGCTPQEWSACISGLPELGKHVDIVGSCFHLNEYS 208 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD--------- 255 + D ++LR G +D+GGG + Y +D + Sbjct: 209 SEQRGKE--AHRSLDFMRELRRKGWRADTLDIGGGFSVRYSADADWEAFQPTLTDASAFH 266 Query: 256 --------YASLIHQYFGNLQCKII-------------------------LEPGRFLVAD 282 Y + G + I LEPGR L+A Sbjct: 267 AGHTPSTSYPYGGEKATGPEMLRAILNTPTKQVDGQTLAERLRTEGVKLALEPGRALLAG 326 Query: 283 VGILVTKVIS---------------IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 G+ V V + S + ++ ++ + + + + Sbjct: 327 CGLTVFPVQGVKSAETERKSPDLNPQENSHYRYQILTAAGLSMSLSEQWKSSEFLPDPTL 386 Query: 328 NPAGDRLHIHADIVGPICETGDFIALN--RKIALPRPGDLLYIEKTGAYGAVQS-GTYNS 384 P + A + G C D + P+ GDLL T Y ++ +++ Sbjct: 387 WPQREGTPTRACVGGSSCMEYDMLTWRTICFPRAPKRGDLLIYHNTAGYQMDKNESSFHQ 446 Query: 385 RLLIPEIMVNGSQFHIIRP 403 L V S IR Sbjct: 447 LPLPSR-FVWDSSVPTIRH 464 >gi|90079227|dbj|BAE89293.1| unnamed protein product [Macaca fascicularis] Length = 354 Score = 77.9 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 91/311 (29%), Gaps = 26/311 (8%) Query: 96 AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDIN 155 E I++ K + +I A + G+ ++E ELK + + + IA Sbjct: 11 PENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIA-------- 62 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFK 215 T I + KFG + L A L +I GV H+ S + + + A Sbjct: 63 --TEDNIGGEEGNMKFGTTLKNCKHLLECAKELDV-QIIGVKFHVSSACKESQVYVHALS 119 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQYFGNLQCK 270 R + G + +D+GGG + P Y + Sbjct: 120 DARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVEIISEPG 179 Query: 271 IILEPGRFLVADVGILVTKVISIKKSAD----------KTFVILDVAMNDFMRPTLYDAY 320 F +A I V + K + + + D F D Sbjct: 180 SYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLN 239 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 D + + GP C+ D I + + GD L + GA + Sbjct: 240 TIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPS 299 Query: 381 TYNSRLLIPEI 391 +N Sbjct: 300 AFNDFQRPAIY 310 >gi|41350895|gb|AAH65772.1| Adc protein [Mus musculus] Length = 405 Score = 77.9 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 57/309 (18%), Positives = 108/309 (34%), Gaps = 27/309 (8%) Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E+ VPA +I+ + K + +I A + G+ + ++E EL + + S Sbjct: 80 LAEMELVQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKM 139 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 IA T S +FG + L A V++ GV HIGS Sbjct: 140 VLCIA----------TQDSHSLNHLSLRFGASLKSCRHLLENAKKS-HVEVVGVSFHIGS 188 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--I 260 +++ ++ R + Q GH + +D+GGG + R + + Sbjct: 189 GCPDPQAYAQSIADARLVFQMGEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALD 248 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK--------------TFVILDV 306 + I+ E GR+ V + +++ ++ D+ + + + Sbjct: 249 LYFPEGCGVDILAELGRYYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYYLDEG 308 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 F + P+ D+ + + GP E D +A + + GD L Sbjct: 309 VYGVFNSVLFDNTCPTPALQKKPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWL 368 Query: 367 YIEKTGAYG 375 + GAY Sbjct: 369 VFDNMGAYT 377 >gi|23379715|gb|AAM76600.1| ornithine decarboxylase 1 [Gorilla gorilla] Length = 200 Score = 77.9 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 13/209 (6%) Query: 33 STTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAA 92 I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ + Sbjct: 2 DLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQLVQSL 59 Query: 93 PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 VP RI+++ K + +I A +G+ +SE EL + + IA Sbjct: 60 GVPPVRIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA----- 114 Query: 153 DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK 212 T + + KFG + L A L + + GV H+GS E+F + Sbjct: 115 -----TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPETFVQ 168 Query: 213 AFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A R + G ++ +D+GGG Sbjct: 169 AISDARCVFDMGAEVGFSMYLLDIGGGFP 197 >gi|148656953|ref|YP_001277158.1| Orn/DAP/Arg decarboxylase 2 [Roseiflexus sp. RS-1] gi|148569063|gb|ABQ91208.1| Orn/DAP/Arg decarboxylase 2 [Roseiflexus sp. RS-1] Length = 522 Score = 77.6 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 64/444 (14%), Positives = 142/444 (31%), Gaps = 46/444 (10%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYAL 59 + L A+ + L + P I D + YA Sbjct: 31 DRLLLADQIDLNAMVARYGAPLEVAYCPQITLQIERMLAWADDARMRSGYVGGFIYAYAT 90 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAA----PVPAERIVFSGVGKTIDEIDLAL 115 KAN + V++T G+ + + ++ A +P++R +F K + Sbjct: 91 KANFAEEVVRTAIGAGAHYETSAAADVTIAHRLWQQGVLPSDRYIFCNGSKDDAYLAAIS 150 Query: 116 QSGI-----YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 ++ EL+TL D++A+ ++ Sbjct: 151 ALRRAGFARVVPVIDDLDELETLLAMCREPLLLGVRERHAPADVDADHPG-------GER 203 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 FG+ +I + P ++ +GSQI+ + ++ + +LR + Sbjct: 204 FGLTPDEIEQVVERLRHTPH-RLVMYHAMVGSQIEDADRWNMRLARSAEAYARLRQQAPS 262 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASL-------IHQYFGNLQCKIILEPGRFLVADV 283 + + GGG+ + +S + Q ++ E GR+ VA Sbjct: 263 LMLFNFGGGMPTSAYSLDFRFDYVGFLERLMRTLASTCAAHNVPQPTLVGEFGRYTVASH 322 Query: 284 GILVTKVISIKKSAD--KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + + +V +K+ +V+++ ++ + +L E + DR + Sbjct: 323 NVFIMEVGRVKRGQGDAPDWVLINGSLMVSLPDSLIVPGQEFIILPLDGWDRPVRPVRLA 382 Query: 342 GP-ICETGDFIALNRKIALPRP----GDLLYIEKTGAYGAVQS----GTYNSRLLIPEIM 392 G C++ DF L P G + GAY + + + + I+ Sbjct: 383 GRLTCDSDDFFPRPGAPPLLLPDPYPGQKIAFFGVGAYQQMIAGRGGAHHCLTPEMRRII 442 Query: 393 VNGSQFHIIRP---RMTFQELIEL 413 + + ++ +++ L Sbjct: 443 IERDEDALVVREVAPQNLGQIMAL 466 >gi|289812001|ref|ZP_06542630.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 69 Score = 77.6 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Query: 352 ALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQE 409 + GD++ GAY YN+R +M++ + +IR ++++ Sbjct: 3 GEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYED 62 Query: 410 LIELDS 415 +++ D Sbjct: 63 MVKYDI 68 >gi|222628307|gb|EEE60439.1| hypothetical protein OsJ_13656 [Oryza sativa Japonica Group] Length = 187 Score = 77.6 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 25/85 (29%) Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 + I D L + + + GP C++ D + ++ Sbjct: 90 YWIDDGVYGSLNCILLDSYVPRPRPLAGARPGEETHASTVFGPTCDSIDTVVTGYQLPEM 149 Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSR 385 D L + GAY ++N Sbjct: 150 SVDDWLVFDDMGAYTTAAGSSFNGF 174 >gi|196018902|ref|XP_002118886.1| hypothetical protein TRIADDRAFT_62879 [Trichoplax adhaerens] gi|190577850|gb|EDV18628.1| hypothetical protein TRIADDRAFT_62879 [Trichoplax adhaerens] Length = 641 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 12/244 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIVSEGE 85 TP + + + K AFD + ++ YALKAN N +I++L G G++ +S E Sbjct: 389 TPVFITDKSILNKKVKNIRKAFD-NNCLLYYALKANFNPKIIRSLKDAGIDGVETISPFE 447 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + A + +I+F+G E+D A + N+ S SEL+ ++ + Sbjct: 448 IDLAKKCGFKSNQILFTGNNCDNYELDYANKQN-VVVNIGSISELQYYAEKHNG----SE 502 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 ++ R+NP K+I TG ++ KFGI Q+ +K+ G+ H+GS + Sbjct: 503 VSIRINPGFGDGEFKQIITGGEDSKFGIYHSQMEEALNIIKFY-NLKLIGLHCHLGSGLY 561 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 ++F + L Q+ + + ID+GGG G+ Y S++A ++ +Y+ Sbjct: 562 NTKNFAPMVDFMFKLGNQIENL----RFIDLGGGFGVRYKPSDEEVDLSEFALVVDKYYK 617 Query: 266 NLQC 269 Q Sbjct: 618 KYQN 621 >gi|150389435|ref|YP_001319484.1| Orn/DAP/Arg decarboxylase 2 [Alkaliphilus metalliredigens QYMF] gi|149949297|gb|ABR47825.1| Orn/DAP/Arg decarboxylase 2 [Alkaliphilus metalliredigens QYMF] Length = 482 Score = 77.2 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 86/241 (35%), Gaps = 5/241 (2%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTL 71 E SL L + +P I +N F F+ V YA K N + ++++ Sbjct: 18 EKHSLLNLIDGLGSPLNIIFPEEINQNIEEFKEVFNKHFVSGKVFYAHKTNKSNSIVRQA 77 Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 + +D+ SE EL+ AL +RI +G FN+++ EL Sbjct: 78 SFEAVNIDVASENELKSALKNGFTGDRIEATGPKNRNFIT--LGLQHNIIFNIDNLQELD 135 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + ++ + ++ + + I K KFGIP I+ S Sbjct: 136 QVMELKKAIDFQNTKKVKILLRFSGFKSESIKVLSKNSKFGIPASGIYQALEKLSQY-RE 194 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 I ++ A + D R + + +D+GGG ++Y D + Sbjct: 195 DIHFWGFSFHVDTIDLKEKVIAIENCIDFFDIARDHDFEPRVLDIGGGFKVSYIEDAKEW 254 Query: 252 S 252 + Sbjct: 255 N 255 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 2/53 (3%) Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKI--ALPRPGDLLYIEKTGAY 374 + + +G +C D I ++ LP GD++ T Y Sbjct: 389 IHRSKVTDLQEDKGVYFIGNLCLESDLIFKHKIFINQLPANGDIVIFPNTAGY 441 >gi|302554822|ref|ZP_07307164.1| orn/DAP/Arg decarboxylase 2 [Streptomyces viridochromogenes DSM 40736] gi|302472440|gb|EFL35533.1| orn/DAP/Arg decarboxylase 2 [Streptomyces viridochromogenes DSM 40736] Length = 500 Score = 77.2 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 2/96 (2%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQAVIKTLAHLG 75 L L + +P + I +N F + + V YA KAN + A+++ LA Sbjct: 38 LHSLTDALGSPLHVVVPDQIAENLERFRSVYRAHHLSGQVFYAHKANRSSALLRRLAATD 97 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 +G+D+ S GEL+ AL A A+RI +G Sbjct: 98 AGVDVASLGELQHALGAGFTADRITATGPKNPEFLW 133 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 16/44 (36%), Gaps = 2/44 (4%) Query: 335 HIHADIVGPICETGDFIALN-RKIAL-PRPGDLLYIEKTGAYGA 376 + + G +C D I + P PGDLL T Y Sbjct: 414 PVAVHLFGGLCLETDLITRRTVFLPRRPDPGDLLAFANTAGYAM 457 >gi|119175426|ref|XP_001239945.1| hypothetical protein CIMG_09566 [Coccidioides immitis RS] Length = 396 Score = 77.2 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 107/325 (32%), Gaps = 37/325 (11%) Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 ++R L V RI+++ K+ D I A + G+ ++E EL+ L + Sbjct: 1 MQRILNLGVEPHRILYAAPFKSEDGILYAKEHGVTQTMFDTEDELRKLADYFPNAELYLR 60 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + S + K+G+ + Q L A L +K+ G+ H+GS Sbjct: 61 LW----------ADDPSSRVRLGSKYGVQLPQAKELLVLAQEL-NMKVIGLCFHVGSSAA 109 Query: 206 QIESFHKA----FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 +++ +A ++ H I+ ID+GGG + + Sbjct: 110 DFDAYRQAIAFTREVYDFNQSLREDQRHPIRTIDIGGGFSLGNFESAATAIRTSIRQY-- 167 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS-------------ADKTFVILDVAM 308 + + EPGR+ + LV +V+ + I D Sbjct: 168 -FGDEKHLRWFAEPGRYFAEEAFYLVCRVLGTRPRACLGNGIGADEKLPVGDIHINDGIY 226 Query: 309 NDFMRPTLYDAYH-----EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL-PRP 362 ++F+ + + + G C++ D IA N + + Sbjct: 227 HNFLNALTEQVVPQPILLDCTGTPYVSAADNGDPYTVWGQTCDSFDKIATNCVLPRRAKV 286 Query: 363 GDLLYIEKTGAYGAVQSGTYNSRLL 387 GD L GAY V +N Sbjct: 287 GDWLCFPFMGAYTHVTGSDFNGFPK 311 >gi|23379717|gb|AAM76601.1| ornithine decarboxylase 1 [Pongo pygmaeus] Length = 200 Score = 77.2 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 13/209 (6%) Query: 33 STTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAA 92 I K +L + A YA+K N ++A++KTLA +G+G D S+ E++ + Sbjct: 2 DLGDILKKHLRWLXAVPR--VTPFYAVKCNDSKAIVKTLAAVGTGFDCASKTEIQLVQSL 59 Query: 93 PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 VP ERI+++ K + +I A +G+ +SE EL + + IA Sbjct: 60 GVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA----- 114 Query: 153 DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK 212 T + + KFG + L A L + + GV H+GS E+F + Sbjct: 115 -----TDDSKAVCRLSVKFGATLRTSRLLLERAKEL-NIDVVGVSFHVGSGCTDPETFVQ 168 Query: 213 AFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A R + G ++ +D+GGG Sbjct: 169 AISDARCVFDMGAEVGFSMYLLDIGGGFP 197 >gi|309792220|ref|ZP_07686692.1| Orn/DAP/Arg decarboxylase 2 [Oscillochloris trichoides DG6] gi|308225761|gb|EFO79517.1| Orn/DAP/Arg decarboxylase 2 [Oscillochloris trichoides DG6] Length = 508 Score = 76.8 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 56/429 (13%), Positives = 125/429 (29%), Gaps = 34/429 (7%) Query: 2 SAFKYFEGSLHAEN-VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-------- 52 +G + +L +LA+ P T I + Sbjct: 27 DFLTREQGQILLGGQANLNRLANRHGAPLEVVYTPQITTQVERMRTWAEEARQISEYTGT 86 Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVP---AERIVFSGVGKTID 109 + YA KAN + T G + + ++ A + + G Sbjct: 87 FLYAYATKANFAAEAVATALAAGVHYETSAAADVMIAQRLWRQGTLPKGRLIFCHGSKEP 146 Query: 110 EIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED 169 A++ L LN+ + + F V N + + Sbjct: 147 NYLAAIRELRSDGCETITPVLDDLNELEDLITCPHTMQFGVRERAAGNRDGRHPGQDRFG 206 Query: 170 KFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 G I + + A ++ IGSQ++ F + +LR Sbjct: 207 LSGAEITRAAEMIA----ASRHRLVLYHAMIGSQVEDEAHFLNTLRDSVVGYCRLRQQVP 262 Query: 230 NIQHIDVGGGLGIAYHSDHRPPSS-------SDYASLIHQYFGNLQCKIILEPGRFLVAD 282 +++ + GGG+ + + + ++ E GR+ VA Sbjct: 263 TLRYFNFGGGVPTSGYRLGFEFDYVGFLTRLMRVIRDTCTEYDVPMPDLVGEFGRYTVAT 322 Query: 283 VGILVTKVISIK--KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI 340 + + +V ++K + + + +++ ++ + ++ E + DR + Sbjct: 323 HSVFLLEVGAVKSGQPGEPDWYLVNGSLMVSLPDSILVEGQEFVIVPLNGWDRPVRPVRL 382 Query: 341 VG-PICETGDFIAL----NRKIALPRPGDLLYIEKTGAYGAVQS----GTYNSRLLIPEI 391 G C++ D + G +L I GAY + S + + Sbjct: 383 AGRRTCDSDDVYPRPDQPPLMLPDIGEGLVLAICGVGAYQQMISGRGGAHHCLSPEPARV 442 Query: 392 MVNGSQFHI 400 + + + + Sbjct: 443 VFSQVEGRL 451 >gi|295134035|ref|YP_003584711.1| diaminopimelate decarboxylase [Zunongwangia profunda SM-A87] gi|294982050|gb|ADF52515.1| probable diaminopimelate decarboxylase [Zunongwangia profunda SM-A87] Length = 487 Score = 76.8 bits (187), Expect = 7e-12, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 89/241 (36%), Gaps = 8/241 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAVIKTLAHLG 75 +++L +P + KN F F D + YA KAN +A +K Sbjct: 33 VDELFKRFGSPLNILHPASFAKNCTRFKEVFQNHDIKFGIFYARKANKAKAFVKQAFIEN 92 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G+D SE EL ++L + +V + KT +++ A ++++ E +N Sbjct: 93 IGVDTASERELLQSLQLGGDGDHLVLTSAIKTKEQVKTA-LQNNVPIVLDNDDECVLVND 151 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 A KA +AFR+ +KK + + K+ G Sbjct: 152 LAEKNNCKARVAFRL---SGFYVNKKKLYSRFGFDIDDIEEYLMKHVGKDKKYNNFKVEG 208 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + H+ + S + Q+LR N + + ID+GGG+ I Y + D Sbjct: 209 LHFHLDGYSTRQRSEALLHCISL--IQKLRENDFSFRFIDMGGGILINYLKHKEEWLNFD 266 Query: 256 Y 256 Sbjct: 267 V 267 >gi|196013978|ref|XP_002116849.1| hypothetical protein TRIADDRAFT_60904 [Trichoplax adhaerens] gi|190580567|gb|EDV20649.1| hypothetical protein TRIADDRAFT_60904 [Trichoplax adhaerens] Length = 397 Score = 76.8 bits (187), Expect = 7e-12, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 43/139 (30%), Gaps = 14/139 (10%) Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + +II EPG++ ILVT VI + D + +Y Sbjct: 245 KYFPTECGVEIIAEPGKYFTTSSMILVTNVIGKRLRYDDNVKTEQNQSHKESMECMYHIN 304 Query: 321 H--------------EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 V + + I GP C D IA + I GD Sbjct: 305 DGLHGSFLRRLFTKEPFIPNVLKSKSGQFHRSSIWGPTCNGLDCIASGQTIPEMEAGDWT 364 Query: 367 YIEKTGAYGAVQSGTYNSR 385 Y E GAY + S +N Sbjct: 365 YFENLGAYASAASSNFNGF 383 >gi|291388378|ref|XP_002710636.1| PREDICTED: ornithine decarboxylase antizyme inhibitor, partial [Oryctolagus cuniculus] Length = 300 Score = 76.8 bits (187), Expect = 7e-12, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 74/250 (29%), Gaps = 18/250 (7%) Query: 158 THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 T I + KFG + L A L +I GV H+ S + + + A Sbjct: 9 TEDYIGGEEGNMKFGTSLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQVYVHALSDA 67 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGR 277 R + G+ + +D+GGG L + KII EPG Sbjct: 68 RCVFDMAGEFGYTMNMLDIGGGFTGTEFQLEEVNHVIS-PLLDVYFPEGSGIKIISEPGS 126 Query: 278 FLVADVGILVTKVISIKKSADKT----------------FVILDVAMNDFMRPTLYDAYH 321 + V+ L +I+ K + + + D F + Sbjct: 127 YYVSSAFTLAVNIIAKKVVENGKLSSGVEKTGSDEPAFVYYMNDGVYGSFASKLSENLNA 186 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 D + + GP C+ D I N + GD L + GA + Sbjct: 187 IPEVHKKCKEDEPLFTSSLWGPSCDELDLIVENCLLPELNVGDWLIFDNMGADSFHEPSA 246 Query: 382 YNSRLLIPEI 391 +N Sbjct: 247 FNDFQRPAVY 256 >gi|207722229|ref|YP_002252665.1| siderophore synthesis decarboxylase protein [Ralstonia solanacearum MolK2] gi|207728412|ref|YP_002256806.1| siderophore synthesis decarboxylase 'partial sequence n terminus) protein [Ralstonia solanacearum MolK2] gi|206587405|emb|CAQ17987.1| putative siderophore synthesis decarboxylase protein [Ralstonia solanacearum MolK2] gi|206591658|emb|CAQ57270.1| probable siderophore synthesis decarboxylase 'partial sequence n terminus) protein [Ralstonia solanacearum MolK2] Length = 364 Score = 76.8 bits (187), Expect = 7e-12, Method: Composition-based stats. Identities = 81/289 (28%), Positives = 127/289 (43%), Gaps = 17/289 (5%) Query: 19 EKLAHVV---QT-PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 +L T P Y Y + + S + YA+KANS+ V+ L Sbjct: 3 RELIERYLQGATAPVCAYLYDLDHLRERAGRLSAMLP-PGCELFYAIKANSDAPVLAALD 61 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 +G ++ S GE+ RA A RIVF G GKT E+ AL+ G+ +VESE +L+ Sbjct: 62 GAVAGYEVASLGEVARAREVGAHA-RIVFGGPGKTDAELQCALERGVELIHVESELQLRR 120 Query: 133 LNQRAVSLGKKAPIAFRVNPDI----NANTHKKISTGKKEDK--FGIPIHQIHSLYAYAS 186 L+ A +G++A + RVNP+ +A + + FGI + L A Sbjct: 121 LDAVACRMGRRARVLLRVNPNPLSADSAGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLAR 180 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYH 245 L GVK+ G+ +H S +S + L +LR + ++VGGG+G+ Y Sbjct: 181 GLAGVKVVGLHLHALSNNLDADSHLALVRHYLALALRLRREHGLTLDTLNVGGGIGVDYA 240 Query: 246 SDHRPPSSSDYASLIHQ--YFGNLQCKIILEPGRFLVADVGILVTKVIS 292 + + + C+I+ E GRF+ AD G VT+V+ Sbjct: 241 QPSQAFDWRRFCDGLGTLLAEAGAGCRIVFECGRFIAADCGYYVTEVVD 289 >gi|289809536|ref|ZP_06540165.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 94 Score = 76.4 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 8/100 (8%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 1 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 53 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERI 99 KA SN +++ + G +D VS GE+ RALAA + Sbjct: 54 KACSNIHILRLMRAQGVKVDSVSLGEIERALAAGYDPQTC 93 >gi|207092889|ref|ZP_03240676.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori HPKX_438_AG0C1] Length = 251 Score = 76.0 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 75/221 (33%), Gaps = 16/221 (7%) Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 + ++ + L + + + N+ ++ GGG I + Sbjct: 24 LHFHTHCEQNADALCRTLEHVEKHFKPYLENMAWVNFGGGHHITRSDYNVNLLIQTI--- 80 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 ++ILEPG + G L+ VI I D+ +LD + + M L Sbjct: 81 KDFKERYHNIEVILEPGEAIGWQCGFLIASVIDIV-QNDQEIAVLDASFSAHMPDCLEMP 139 Query: 320 YHEINYIVNPAGDRLHIHAD-----------IVGPICETGDFIALNRKIALPRPGDLLYI 368 Y V+ D I + + GP C GDF+ + GD + Sbjct: 140 YRPSILKVSAENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVF 199 Query: 369 EKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQE 409 + Y V++ ++N L ++ F I ++++ Sbjct: 200 QDMLHYTIVKNNSFNGVPLPSLAKLDQQGFK-ILKNFSYED 239 >gi|317476227|ref|ZP_07935478.1| pyridoxal-dependent decarboxylase [Bacteroides eggerthii 1_2_48FAA] gi|316907638|gb|EFV29341.1| pyridoxal-dependent decarboxylase [Bacteroides eggerthii 1_2_48FAA] Length = 146 Score = 76.0 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 57/142 (40%), Gaps = 3/142 (2%) Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 +IILEPG G+L ++V+ I ++ IL+V+ M L Y + Sbjct: 1 MRIILEPGSAFTWQTGVLTSEVVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPVVRGAE 60 Query: 329 PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 D ++ + G C +GD++ + + G+ + E Y V++ +N Sbjct: 61 MGNDGPYV-YRLGGNSCLSGDYMGMWSFDHELQIGERIIFEDMIHYTMVKTNMFNGIHHP 119 Query: 389 PEIMV-NGSQFHIIRPRMTFQE 409 M + + + ++++ Sbjct: 120 AIAMWTKEGKADLFKQ-FSYED 140 >gi|330901748|gb|EGH33167.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 209 Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 5/195 (2%) Query: 22 AHVVQT-PF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL 78 A ++T P + Y A++++ A + YA+KANS +++T+A L SG Sbjct: 15 ARALETDPLAAFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETIAPLVSGF 73 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 +I S GE+ + A + VFSG GK ++ AL + + ++ES +E+ L Q A Sbjct: 74 EISSGGEIE-RVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAE 132 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 G+ P+ R+NP + A +++ FGI + + + G + Sbjct: 133 QAGRVQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHV 192 Query: 199 HIGSQIDQIESFHKA 213 H S +E + Sbjct: 193 HAMSHQMSVERHEQL 207 >gi|324497901|gb|ADY39599.1| putative ornithine decarboxylase-like [Hottentotta judaicus] Length = 165 Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 2/122 (1%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF+ T IE Y + YA+K N V++ LA +G D S+ E+ Sbjct: 32 PFFIVDLTDIEHKYKLWK--LKMPRITPFYAMKCNDCPGVLQYLASMGVNFDCASKTEIE 89 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + V RI+++ KT I A G+ ++E EL + + I Sbjct: 90 TVIKLGVDPSRIIYANPCKTRSFIKYAATVGVKMMTFDNEIELYKIKSIFPNAELIIRIK 149 Query: 148 FR 149 Sbjct: 150 VD 151 >gi|260829309|ref|XP_002609604.1| hypothetical protein BRAFLDRAFT_125023 [Branchiostoma floridae] gi|229294966|gb|EEN65614.1| hypothetical protein BRAFLDRAFT_125023 [Branchiostoma floridae] Length = 151 Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 2/111 (1%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + Y + + ++ YA+K N + V++ LA+LG+G D S+ E++ Sbjct: 41 FFVCDLGDVVNKYKKWVSRLPRVEP--FYAVKCNDSPHVLQVLANLGTGFDCASKTEVQT 98 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 L V +RIV++ K I A ++ + ++E EL + Sbjct: 99 VLNLGVAPDRIVYANPCKQTSHIRYAKKNSVDLMTFDNEDELHKIKNYFPD 149 >gi|302503565|ref|XP_003013742.1| hypothetical protein ARB_07853 [Arthroderma benhamiae CBS 112371] gi|291177308|gb|EFE33102.1| hypothetical protein ARB_07853 [Arthroderma benhamiae CBS 112371] Length = 425 Score = 75.2 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 122/387 (31%), Gaps = 75/387 (19%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF + Y + G Y + + G Sbjct: 53 PFCVMDLGYVHDQYEHWEKTLPG--VTPFY-----------ELVLAQGI----------- 88 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 PA RI+F+ K+ +I A +G+ ++E+EL + Q Sbjct: 89 -------PAARILFANPCKSPSDITFARNTGVNRMTFDNEAELHKIKQLFPESQLILRCF 141 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 +T KFG L A +L + + GV HIGS Sbjct: 142 ----------ASDPSATYSLSAKFGAHPETSVRLLECAKSL-RLNVIGVSFHIGSGARDP 190 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +F A + R + GH+++ +D+GGG + D +F ++ Sbjct: 191 NAFEIAIESSRRIFDAGIRIGHSMRLLDIGGGFSESTFEDMAASIQRSL----DFHFRDI 246 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 +++ EPGR+ A + ++I+ + + + + + ++ +Y + + Sbjct: 247 NVELVAEPGRYFAAGAMTIACEIIARRDAKEAPPSAEEASNMLYLNDGVYGTFSSSLFEP 306 Query: 328 NPAG--------------DRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTG 372 +P + + GP C+ D IA + ++ GD LY G Sbjct: 307 SPHPRVLRASGVFYPQPAAGDQVKNILWGPTCDGVDCIAKDVELPERLTFGDWLYFPDMG 366 Query: 373 --------------AYGAVQSGTYNSR 385 AY + +N Sbjct: 367 VSYPCFLAFTDLMPAYSTCLATGFNGF 393 >gi|327538875|gb|EGF25516.1| diaminopimelate decarboxylase [Rhodopirellula baltica WH47] Length = 447 Score = 75.2 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 68/431 (15%), Positives = 130/431 (30%), Gaps = 68/431 (15%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAV 67 L A++ +++L + ST + N N + + +A KAN Sbjct: 3 ELAADSDRVKQLIEFHGSAVNVLSTDPMRSNIKDLQNVASQASVPLQIHFARKANKCAEF 62 Query: 68 IKTLAHLGSGLDIVSEGELRRA-----LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 ++T G D+ SE E ++ P + + + + Sbjct: 63 VRTGLMESIGFDVASESETQQTLDELLRFPQHPFDSPIVCTAAVKPVSLIRSCVLSNIVL 122 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 +++E EL TL + LG AP A H +FG+P ++ L Sbjct: 123 VIDNEDELTTLRETLAHLGSTAPKARIAFRLQ----HCSAKFPDLPSRFGMPADELTLLA 178 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIES--FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 P +++ G+ H+ +Q + + ++R GH + +D+GGG Sbjct: 179 RSLCDEPRIQVVGIHFHVHRSDEQFSPSFTKALIEDALRVVDRVREIGHAVAWLDMGGGF 238 Query: 241 GIAYHSDHRPPSSSD-------------------------YASLIHQYFGNLQCKII--- 272 + Y + + + Sbjct: 239 PVNYLCHQKQWQRFFKEAHTFTESSGRFEANRKLTWNQRPLRDIDSTWQPMNAADWFRAV 298 Query: 273 -----------------LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 EPGR L+ G+ + +V+ +K+ ++ +I + + R T Sbjct: 299 LTSSLAYEINRRELILKCEPGRALLDGCGLTIAEVLFVKRDQNQNHLIGLMMNSSQCRTT 358 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD--------IVGPICETGDFIALNRK-IAL-PRPGDL 365 D + I + VG C +++ R GD Sbjct: 359 RDDFLVDPIVISVSNESAKPTNQTDHAEIEGYFVGGYCTESEYLMQRRFRFPRGISRGDF 418 Query: 366 LYIEKTGAYGA 376 + I T AY Sbjct: 419 VLIPNTAAYQM 429 >gi|187466287|emb|CAQ51903.1| arginine decarboxylase [Mus musculus] Length = 322 Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 107/306 (34%), Gaps = 27/306 (8%) Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + VPA +I+ + K + +I A + G+ + ++E EL + + S Sbjct: 1 MELVQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLC 60 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 IA T S +FG + L A V++ GV HIGS Sbjct: 61 IA----------TQDSHSLNHLSLRFGASLKSCRHLLENAKKS-HVEVVGVSFHIGSGCP 109 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQY 263 +++ ++ R + Q GH + +D+GGG + R + + + Sbjct: 110 DPQAYAQSIADARLVFQMGEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYF 169 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK--------------TFVILDVAMN 309 I+ E GR+ V + +++ ++ D+ + + + Sbjct: 170 PEGCGVDILAELGRYYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYHLDEGVYG 229 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 F + P+ D+ + + GP E D +A + + GD L + Sbjct: 230 VFNSVLFDNTCPTPALQKKPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFD 289 Query: 370 KTGAYG 375 GAY Sbjct: 290 NMGAYT 295 >gi|83955986|ref|ZP_00964497.1| probable diaminopimelate decarboxylase [Sulfitobacter sp. NAS-14.1] gi|83839750|gb|EAP78928.1| probable diaminopimelate decarboxylase [Sulfitobacter sp. NAS-14.1] Length = 475 Score = 74.9 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 74/451 (16%), Positives = 138/451 (30%), Gaps = 75/451 (16%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAV 67 L + SL+ L P S +N ++ G+ + +A KAN + Sbjct: 27 ELLQDRPSLDALTDRFGAPLNIQSVDPFRRNIAQLTDCVTDYGLPFLPMFARKANKCLSY 86 Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127 ++ +G G+D S E+ + L +P +RIV + K + + G +++E Sbjct: 87 VQAARDMGIGIDTASHAEVDQCLEQGLPGDRIVCTAAVKDRALM-ILCVGGGVTVILDNE 145 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 EL+ L A K + R+N T K +FG P+ QI +L A Sbjct: 146 DELELLEDVAEGATKPISVGLRLNGFERDGT-------KLYSRFGFPLTQIPTLAARIGA 198 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD 247 +++ G+ H+ E A L ++ + +D+GGG+ + Y D Sbjct: 199 SETLRLDGLHFHL--NGYSAEDRIAAILQTLPLIHKINGDSTAPFFLDIGGGIPMNYLGD 256 Query: 248 HRPPSSSDY------------------------------------------ASLIHQYFG 265 + + Sbjct: 257 AVEWETWLAELDRALSGDRDPITQHNDGLGRKAGGEGKVDSYPVAQSLVQEDWMRRILDH 316 Query: 266 NLQCKIILEPGR------------FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + R L+ GI + +V K+ + T VI R Sbjct: 317 MADGQTVAAHLRDAHISLRCEPGRSLLDGCGITLARVAFCKRDSAGTPVIGVQMNRTQSR 376 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK-IAL-PRPGDLLYIEKT 371 + + + P + I + G C +++ + + GDL+ T Sbjct: 377 SGFAEFALDPLMVPAPGPRKEPIEGYLSGTYCTESEWLTRRKMSFPQGVKAGDLMVFPNT 436 Query: 372 GAYGA----VQSGTYNSRLLIPEIMVNGSQF 398 Y +S + L + V Sbjct: 437 AGYLMHFLESRSHQF---PLARNVFVTEGNA 464 >gi|165975419|ref|YP_001649251.1| MccE [Escherichia coli] gi|158347574|gb|ABW37145.1| MccE [Escherichia coli] Length = 589 Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 116/388 (29%), Gaps = 25/388 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 F + + + ++ + Y+ K+N+ + ++ G ++ S E+ Sbjct: 29 FVIFDVDGALERLEHYRCQLKSFFPNSSIAYSYKSNNLAQWCQIISGKGLYAEVCSVDEM 88 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A + L V++ E K LN+ I Sbjct: 89 ---NLAKRDGFNRIVFDGPLKKTSELLKAIEIGALIEVDNIDECKRLNELCKLHKLTCRI 145 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R++ + N + + + + S + + G +H+GS + Sbjct: 146 HLRLSHYYDDNLSRFGLSESEAINLLEML---------ISKSEYLILDGFHLHVGSNLPN 196 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA------SLI 260 E KA +L + + + + SD+ P + Sbjct: 197 AEKICKAVIQYHELILRYMPDDGTLNLGSGIPADSFSASSDNPTPCPEVFFSSIYDTIKN 256 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + I EPGR LV D G + KVIS K ++ +N +D Sbjct: 257 CFGTVCDKWNYIFEPGRHLVEDFGYFIGKVISTKNRYGVKVAQTNIGINWIPSIRNWDHS 316 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLY-IEKTGAYGAVQS 379 + + N D I G C D + + + D L+ + GAY Sbjct: 317 FTLFHNHNHISDDKSDEYIIAGFNCFECDCLFPSVILPS-NLSDYLFSVRGCGAYDMQTG 375 Query: 380 GTYNSRLLIPEIMVNGSQFHI--IRPRM 405 + +R L + +I I R Sbjct: 376 NQW-TRNLYAVYTITNDVVNISRIHRRE 402 >gi|302664901|ref|XP_003024075.1| hypothetical protein TRV_01774 [Trichophyton verrucosum HKI 0517] gi|291188104|gb|EFE43457.1| hypothetical protein TRV_01774 [Trichophyton verrucosum HKI 0517] Length = 425 Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 121/387 (31%), Gaps = 75/387 (19%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF + Y + G Y + + G Sbjct: 53 PFCVMDLGYVHDQYEHWEKTLPG--VTPFY-----------ELVLAQGI----------- 88 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 PA RI+F+ K+ +I A G+ ++E+EL + Q Sbjct: 89 -------PAARILFANPCKSPSDITFARNVGVNRLTFDNEAELHKIKQLFPESQLILRCF 141 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 +T KFG L A +L + + GV HIGS Sbjct: 142 ----------ASDPSATYSLSAKFGAHPEASVRLLECAKSL-RLNVIGVSFHIGSGARDP 190 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +F A + R + GH+++ +D+GGG + D +F ++ Sbjct: 191 NAFEIAIESSRRIFDAGIRIGHSMRLLDIGGGFSESTFEDMAASIQRSL----DFHFCDV 246 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 +++ EPGR+ A + ++I+ + + + + + ++ +Y + + Sbjct: 247 NVELVAEPGRYFAAGAMTIACEIIARRDAKEAPPSAEEASNMLYLNDGVYGTFSSSLFEP 306 Query: 328 NPAG--------------DRLHIHADIVGPICETGDFIALNRKIAL-PRPGDLLYIEKTG 372 +P + + GP C+ D IA + ++ GD LY G Sbjct: 307 SPHPRVLRASGVFYPQPAAGDQVKNILWGPTCDGVDCIAKDVELPERLTFGDWLYFPDMG 366 Query: 373 --------------AYGAVQSGTYNSR 385 AY + +N Sbjct: 367 VNYPCFLAFTDLMPAYSTCLATGFNGF 393 >gi|159572757|emb|CAP19188.1| arginine decarboxylase [Mus musculus] Length = 323 Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 107/306 (34%), Gaps = 27/306 (8%) Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + VPA +I+ + K + +I A + G+ + ++E EL + + S Sbjct: 1 MELVQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLC 60 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 IA T S +FG + L A V++ GV HIGS Sbjct: 61 IA----------TQDSHSLNHLSLRFGASLKSCRHLLENAKKS-HVEVVGVSFHIGSGCP 109 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQY 263 +++ ++ R + Q GH + +D+GGG + R + + + Sbjct: 110 DPQAYAQSIADARLVFQMGEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYF 169 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK--------------TFVILDVAMN 309 I+ E GR+ V + +++ ++ D+ + + + Sbjct: 170 PEGCGVDILAELGRYYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYYLDEGVYG 229 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 F + P+ D+ + + GP E D +A + + GD L + Sbjct: 230 VFNSVLFDNTCPTPALQKKPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFD 289 Query: 370 KTGAYG 375 GAY Sbjct: 290 NMGAYT 295 >gi|149575860|ref|XP_001506230.1| PREDICTED: similar to antizyme inhibitor 1, partial [Ornithorhynchus anatinus] Length = 301 Score = 74.1 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 99/272 (36%), Gaps = 14/272 (5%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKNSQWQNIVAQIKP--FYTVKCNSTPAVLEILAALGTGFACSSKSEIAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 VP E I++ K +I A ++G+ ++E ELK + + IA Sbjct: 98 VQELGVPPENIIYVSPSKQTSQIKFAAKAGVNIMTCDNEMELKKIALNHPNAKLLLHIA- 156 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + KFG + L A L V+I GV H+ S + + Sbjct: 157 ---------TEDISGDEEMSMKFGTTLKNCRHLLECAKEL-QVQIVGVKFHVSSSCKEPQ 206 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A R + G + +D+GGG + L + Sbjct: 207 VYIHALSDARCVFDMAGEFGFKMNILDIGGGFTGSEFQLEEVNHVIR-PLLDIYFPEGSG 265 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKT 300 K+I EPG + V+ L +I+ K + Sbjct: 266 IKVIAEPGSYYVSSAFTLAVNIIAKKVVENDH 297 >gi|213021895|ref|ZP_03336342.1| hypothetical protein Salmonelentericaenterica_03877 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 58 Score = 74.1 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 361 RPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN-GSQFHIIRPRMTFQELIELDS 415 GD++ GAY YN+R +M++ + +IR +++++++ D Sbjct: 2 HVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVKYDI 57 >gi|218514643|ref|ZP_03511483.1| probable ornithine decarboxylase protein [Rhizobium etli 8C-3] Length = 264 Score = 74.1 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 8/243 (3%) Query: 158 THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 T + + KFG + YA L GV H+GSQ+ +++++ A Sbjct: 23 TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLQS-YGVSFHVGSQMTKVDAWDSALADA 81 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFGNLQCKIILEP 275 + + L G ++Q +++GGG Y D + + +FGN + I+EP Sbjct: 82 KRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFGNQIPQTIIEP 141 Query: 276 GRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH 335 GR +V + G++ +V+ I K +D I Y + D Sbjct: 142 GRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTEHDGDE 201 Query: 336 -IHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT-YNSRLLIPE 390 I GP C++ D + LP GD + IE TGAY S +N + Sbjct: 202 MEPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAVAFNGFEPLKA 261 Query: 391 IMV 393 ++ Sbjct: 262 YVI 264 >gi|318086929|gb|ADV40065.1| ornithine decarboxylase [Triticum aestivum] Length = 334 Score = 73.7 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 102/311 (32%), Gaps = 13/311 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY + + Y + A G+ CYA+K N A++ LA LG+G D S E+ Sbjct: 37 FYVFDLARVVDLYRGWRRALPGVRA--CYAVKCNPEPALLGALAALGAGFDCASRREIEA 94 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 LA V IV++ K ++ A + G+ +SE E+ + + Sbjct: 95 VLALGVQPGSIVYANPCKPEAHLEYAAEVGVSLATYDSEEEVVKVKRCHPGCE-----LI 149 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + + K A+ G+ ++GV H+GS + Sbjct: 150 LRIKGPDGGGPRVDLGTKYG-----AHEDEVMPLLRAAQREGLNVAGVSFHVGSGASNTD 204 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + A + R + G + GG ++ A+L + Sbjct: 205 VYRGAIEAARGVFDAAAGLGMPPMRVLDIGGG-FMAGPAFDEAAAVINAALERYFGELPC 263 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 ++I EPGR+ + +VI + + +D + + D Y + Sbjct: 264 VEVIGEPGRYFAETAFTMAARVIGKRTRGEVREYWIDDGLYGTLSCIPMDHYVPHPRPLA 323 Query: 329 PAGDRLHIHAD 339 + Sbjct: 324 VPRAGEKTYTS 334 >gi|238898933|ref|YP_002924615.1| putative lysine/ornithine decarboxylase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466693|gb|ACQ68467.1| putative lysine/ornithine decarboxylase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 269 Score = 73.7 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 82/228 (35%), Gaps = 12/228 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 +P + N A ++ YA+K N +QA+ ++ A G G D+ Sbjct: 13 VKKYGSPLNLIWPENLHNNLTALRKALQQLHRHLIFYAVKVNKSQALPESAAKSGIGADV 72 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S E+R A + +P +I SG KT + + C +++S E + + + Sbjct: 73 SSLYEMRAARKSGIPYSKICASGPSKTSIFLTDLITHD-ACISIDSTEEFEEIKALIAHI 131 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + + + + ++ L AS G H+ Sbjct: 132 QPAHQVRVLLRYRPSFLPISRFGMKSEDLS--------LCLDKLASLKKQCHFLGFHFHL 183 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 ++ +A + L + + +S G Q +++GGGL + Y H Sbjct: 184 S--GYDCKTRIEAIRELHPMITRAQSLGIKAQIMNIGGGLPVQYVDQH 229 >gi|82541743|ref|XP_725091.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase-related [Plasmodium yoelii yoelii str. 17XNL] gi|23479966|gb|EAA16656.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase-related [Plasmodium yoelii yoelii] Length = 1404 Score = 73.7 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 38/114 (33%) Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 V ++ S + + +++ RP +Y + D + Sbjct: 1281 VVNIHDNRYNYYSYYITDSIYGCFSGIIFDEYSRPPIYIINNNKMDSKKMILDSPLYLTN 1340 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 I G C+ D I + + D + E TGAY V S +N +I + Sbjct: 1341 IFGQSCDGLDMITSSTYLPECNINDWIIYEYTGAYTFVSSSNFNGFQPCKKIYI 1394 Score = 70.2 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 88/243 (36%), Gaps = 18/243 (7%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M+ Y + + + L + T +C + I Y+ F YA+K Sbjct: 831 MNY--YRNNRVEISTFN-KMLNENIDTSVFCINLQKILLQYIRFKRNLPR--VTPFYAVK 885 Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSG 118 +N ++ V+K L L D S GE+ + + +RI+++ K+ + A + Sbjct: 886 SNDDEVVLKFLYGLNCSFDCASIGEINKLITLLPDISTDRIIYANTIKSPASLKYAKEKN 945 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 I ++ ELK + + + I K+G + Sbjct: 946 INLCTFDNIDELKKICKYHPTCSLLLRINIDFKN----------YKSYMSSKYGANEFEW 995 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + + + I GV H+GS I F +A KL R++ G + +++GG Sbjct: 996 EKILKF-GKENNMNIIGVSFHVGSNTKNIFDFCQAIKLSREVFDISHRLGFKFRILNMGG 1054 Query: 239 GLG 241 G Sbjct: 1055 GYP 1057 >gi|12711388|emb|CAC28533.1| ornithine decarboxylase [Platichthys flesus] Length = 116 Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 26/81 (32%) Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359 + + D F A+ P D + I GP C+ D I + Sbjct: 36 MYYVNDGVYGSFNCILYDHAHCLPVLHKKPKPDEIMYPCSIWGPTCDGLDRIVEQCYLPD 95 Query: 360 PRPGDLLYIEKTGAYGAVQSG 380 + GD L E GAY S Sbjct: 96 MQVGDWLVFENMGAYTVAASS 116 >gi|261819928|ref|YP_003258034.1| Orn/DAP/Arg decarboxylase 2 [Pectobacterium wasabiae WPP163] gi|261603941|gb|ACX86427.1| Orn/DAP/Arg decarboxylase 2 [Pectobacterium wasabiae WPP163] Length = 588 Score = 73.3 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 60/383 (15%), Positives = 129/383 (33%), Gaps = 21/383 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDG--MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PF+ + A + + A D ++ ++K+ S ++ +A G ++ S E Sbjct: 27 PFFIFDADAALERARHLTAACKEYFPDAVIAVSVKSCSLGIFLRLIAEEGLSAEVCSADE 86 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + A+ A +RI+ G K +++ +AL G + EL + + +K Sbjct: 87 FKLAIKAGFTGDRIILDGPYKNSEDLSIALDKGALIHVDSA-HELSEIIRLLSGHNQKIG 145 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R++ + ++ + ++ P + + G +H GS ++ Sbjct: 146 VGVRLSHFYS--------DTQRSRFGVTAEEFWDEIVPLLTSCPDISLRGFHLHTGSNLE 197 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + + G ++ + D S + I Sbjct: 198 NPSKVTDSLRDWLPFLVKNMPEGGHLDMGSGFPADSFSPVVDVPTVQPSAFFRDIFSVLS 257 Query: 266 NLQ------CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 K++ EPGR L D G V K +S+K D + ++ +N +++ Sbjct: 258 EYDPALPEKWKLVFEPGRTLSEDHGYAVGKTLSVKNRYDSQVIQTNLGINWIPS--VHNW 315 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +H + + N + G C D + + L I GAY + Sbjct: 316 HHSLLPLGNNKRIPDDTGQILAGFNCFENDSLFPRGPLH-LDDNQLFIIRGCGAYDLQTA 374 Query: 380 GTYNSRLLIPEIMVNGSQFHIIR 402 + +R P + + R Sbjct: 375 NEW-TRTRPPVYALLNKEIITAR 396 >gi|297155652|gb|ADI05364.1| putative lysine/ornithine decarboxylase [Streptomyces bingchenggensis BCW-1] Length = 500 Score = 73.3 bits (178), Expect = 8e-11, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 2/105 (1%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQA 66 GSL + L LA + +P + +N F + + G + A KAN + A Sbjct: 16 GSLLESDHLLHTLADALGSPLGVVLPDQLAENVERFRSVYRGHHLAGQIFLAHKANRSSA 75 Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 +++ LA G+G+D+ S GEL+ AL I +G T Sbjct: 76 LLRRLAATGAGVDVASLGELQHALGCGFAPSLITATGPKDTRFLW 120 Score = 43.3 bits (100), Expect = 0.072, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 2/43 (4%) Query: 336 IHADIVGPICETGDFIALN-RKIAL-PRPGDLLYIEKTGAYGA 376 + + G +C D I + P PGDLL T Y Sbjct: 415 VETYLFGSLCLESDLITRRTVHLPRRPAPGDLLAFVNTAGYCM 457 >gi|290958498|ref|YP_003489680.1| decarboxylase [Streptomyces scabiei 87.22] gi|260648024|emb|CBG71132.1| putative decarboxylase [Streptomyces scabiei 87.22] Length = 374 Score = 72.9 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 74/371 (19%), Positives = 121/371 (32%), Gaps = 23/371 (6%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 I A + V YA+KA+ ++ ++ + G+G+ SE E+ A Sbjct: 2 VELDRIADGVNLAREAHPRI--RVTYAVKASYHRPILDAVRAAGAGVSAFSEMEMALART 59 Query: 92 APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVN 151 A IV++GVG+ ++ A+ +G+ +EL+ L + I FRVN Sbjct: 60 AKFAPYDIVYNGVGREGADLATAVDAGVTVNLESL-AELRGLLHARRADASAGRIGFRVN 118 Query: 152 PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFH 211 + + G A G+ + GV H + + Sbjct: 119 GCVPGESDTLGKYGVLGISVAQ-----LPTVADLLRGSGLVLGGVSFHHLANRLDGTAHL 173 Query: 212 KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI 271 L L + GG + + + +L + +L C Sbjct: 174 DTLDRLIPALAPLSGHPAVALDYIDVGGGLASRLEVGDESAVEMFRALADRIDADLDCTT 233 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 ILE GRFLVAD L+++V+ ++ S ILD N + + + A Sbjct: 234 ILELGRFLVADAESLLSRVVDMRTSGGVMVAILDATTNYLIPAP--GHRFRVERLEPLAQ 291 Query: 332 DRLHIHADIV---GPI-CETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 V G CE RPG L+ + GAY V + L Sbjct: 292 GETRTPVRFVDRLGSTICEN--------HCGPLRPGTLVGVLNAGAYAGVMKEHF-VYPL 342 Query: 388 IPEIMVNGSQF 398 V Sbjct: 343 PDVSFVRDDAV 353 >gi|25141365|ref|NP_740833.1| hypothetical protein F53F10.2 [Caenorhabditis elegans] gi|1943769|gb|AAB52428.1| Hypothetical protein F53F10.2a [Caenorhabditis elegans] Length = 477 Score = 72.9 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 57/372 (15%), Positives = 113/372 (30%), Gaps = 40/372 (10%) Query: 22 AHVVQT--PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL-GSGL 78 A + PF+ AIE+ + YA+ N++ + + L++ Sbjct: 48 AARCGSYQPFFVMDVAAIERRLEALRVMLPRVRPN--YAVACNADPVLARVLSNNIDVNF 105 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 ++ + EL V R VF T I A+ +G F VESE ++ + + Sbjct: 106 EVSNTAELELVSM-NVEPSRAVFCSQLMTRKAIKNAVLAGCSTFVVESEKQVTDVMNASP 164 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV-D 197 + + E FG + +I + A L + Sbjct: 165 EAEIILAVCLPYSTG--------------EVPFGCSVDEIEEILDMAHLLGANVTGIYLE 210 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + + ++ + + + + Q + ++ G ++ S + Sbjct: 211 LGLRATLEDYITSVHDARSIFETADQKFLTLRRVCFGNLSVPTGADGAVNNEFMSFCNSL 270 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA-------------DKTFVIL 304 + + GRFLV + L T VI + + Sbjct: 271 NNVIDDLFESNIDFSASIGRFLVTNAFTLCTNVIGKRAMDAKFITNDDFDDGVGFVYQTN 330 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF---IALNRKIALPR 361 D F + V + I+GP + D + +R++ R Sbjct: 331 DGVYGSFGCKQMDIKPLCKPLDVENDSEEQLHFGTILGPTLDGTDVAQRLMKSRQL---R 387 Query: 362 PGDLLYIEKTGA 373 G+ L E+ GA Sbjct: 388 VGEWLVWEQMGA 399 >gi|68066212|ref|XP_675089.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56494069|emb|CAI02605.1| hypothetical protein PB300842.00.0 [Plasmodium berghei] Length = 578 Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 35/106 (33%) Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 V ++ S + + +++ RP +Y + D + Sbjct: 455 VVNIHDNRYNYYSYYITDSIYGCFSGIIFDEYSRPPMYIINNNKIDSKQMILDSPLYLTN 514 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 I G C+ D I + + D + E TGAY V S +N Sbjct: 515 IFGQSCDGLDMITSSTYLPECNINDWIIYEYTGAYTFVSSSNFNGF 560 Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 88/244 (36%), Gaps = 20/244 (8%) Query: 1 MSAFKYFEGSLHAENVSLEK-LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M+ Y + K L + T C + I Y+ F YA+ Sbjct: 6 MNY--YRNNKAEI--CTFNKMLNENIDTSVICINLQKILLQYIRFKRNLPR--VTPFYAV 59 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQS 117 K+N ++ V+K L L D S GE+ + + +RI+++ K+ + A + Sbjct: 60 KSNDDEVVLKFLYGLNCSFDCASIGEINKLITLLPNISTDRIIYANTIKSPASLKYAKEK 119 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 I ++ ELK + + + I K+G ++ Sbjct: 120 NINLCTFDNIDELKKICKYHPTCSLLLRINIDFKN----------YKSYMSSKYGANEYE 169 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + + I GV H+GS I F +A KL R++ G+ + +++G Sbjct: 170 WEKILKF-GKENNMNIIGVSFHVGSNTKNIFDFCQAIKLSREVFNISHRLGYKFEILNMG 228 Query: 238 GGLG 241 GG Sbjct: 229 GGYP 232 >gi|315658302|ref|ZP_07911174.1| diaminopimelate decarboxylase [Staphylococcus lugdunensis M23590] gi|315496631|gb|EFU84954.1| diaminopimelate decarboxylase [Staphylococcus lugdunensis M23590] Length = 67 Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 3/64 (4%) Query: 5 KYFE-GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKA 61 KY + G L SL+ LA TP Y I + +AF + YA KA Sbjct: 4 KYNDYGELTMGGTSLKTLALSFGTPTIVYDEDQIRHQMRRYHSAFKQSGLTYNISYASKA 63 Query: 62 NSNQ 65 + Sbjct: 64 FTCL 67 >gi|307321615|ref|ZP_07601007.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83] gi|306892714|gb|EFN23508.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83] Length = 457 Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 69/422 (16%), Positives = 119/422 (28%), Gaps = 40/422 (9%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 L + H +P +++N A + + + Y K N + +++ G Sbjct: 31 LLEWVHRYGSPLNLIWPGTLQENLAALEGALVDNRVAHAIYYGAKVNKSPGLMQAALAAG 90 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD+ S ELR A R+V +G KT L +V+S EL+ L Sbjct: 91 AGLDVSSVYELRDARRLGADGARLVATGPAKTRAFHQELLDC-EALISVDSPEELEDLVA 149 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + PI R+ P + + + + Sbjct: 150 LLPADAAPQPILLRLQPQDQKKSRFGMPADAVVHCLARLSGENRLRFDGLHFHLSGYRWE 209 Query: 196 VDMHIGSQIDQIES-------------------------FHKAFKLLRDLTQQLRSNGHN 230 + +Q + + L + R+ Sbjct: 210 TRLAALNQAADLIAGARRMGFSPAMIDIGGGLPVQYVDEAKYQAHLAAQRPEDYRTGTIP 269 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290 GG L A + + YF + +EPGR L I V ++ Sbjct: 270 DSFYPYGGALSAADWLRQLLQAEMSDGRSVATYFAQEALTLAMEPGRALADQAAISVFRI 329 Query: 291 -ISIKKSADKTFVILDVAMNDFMRPTL---YDAYHEINYIVNPAGDRLHIHADIVGPICE 346 D + L+ + + A I A + G C Sbjct: 330 LRVKALGPDAHVIFLEGGSFSACETWFASEFLIDPILVPATRAAAQSAPIRAYLAGHSCL 389 Query: 347 TGDFIALNRKIALPR---PGDLLYIEKTGAYGAV-QSGTYNSRLLIPEIMVNG---SQFH 399 D I+ NR + P GDLL TG Y ++ + V + H Sbjct: 390 DEDVIS-NRWLTFPTAPGAGDLLVYANTGGYQMDLLENEFHRHPMPARFCVTNDAEGRSH 448 Query: 400 II 401 ++ Sbjct: 449 LV 450 >gi|323332699|gb|EGA74104.1| Spe1p [Saccharomyces cerevisiae AWRI796] Length = 291 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 79/231 (34%), Gaps = 28/231 (12%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG--HNIQHIDVGGGLGIAYHSDHR 249 ++GV H+GS S +KA + R + + S ++ +DVGGG + Sbjct: 62 NLAGVSFHVGSGASDFTSLYKAVRDARTVFDKAASEYGLPPLKILDVGGGFQFESFKEST 121 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK-SADKTFVILDVAM 308 + II EPGR+ VA L + VI+ +K S ++ + + + Sbjct: 122 AVLRLAL---EEFFPVGCGVDIIAEPGRYFVATAFTLASHVIAKRKLSENEAMIYTNDGV 178 Query: 309 NDFMRPTLYDAYHEINYIVNPAGD---------------------RLHIHADIVGPICET 347 M L+D + + I GP C+ Sbjct: 179 YGNMNCILFDHQEPHPRTLYHNLEFHYNDFESTTAVLDSINKTRSEYPYKVSIWGPTCDG 238 Query: 348 GDFIALNRKI-ALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ 397 D IA + GD Y GAY + + +N +I+ S+ Sbjct: 239 LDCIAKEYYMKHDVIVGDWFYFPALGAYTSSAATQFNGFEQTADIVYIDSE 289 >gi|302416511|ref|XP_003006087.1| ornithine decarboxylase [Verticillium albo-atrum VaMs.102] gi|261355503|gb|EEY17931.1| ornithine decarboxylase [Verticillium albo-atrum VaMs.102] Length = 165 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 2/77 (2%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + ++ + + YA+K N + VI+ LA LG+G D S+ E+ + Sbjct: 73 FFVADLGEVYRQHMRWKLNLPRVKP--FYAVKCNPDPRVIELLAALGTGFDCASKWEIDQ 130 Query: 89 ALAAPVPAERIVFSGVG 105 L + ERI+++ Sbjct: 131 ILNMGLAPERIIYAQPC 147 >gi|256833745|ref|YP_003162472.1| Orn/DAP/Arg decarboxylase 2 [Jonesia denitrificans DSM 20603] gi|256687276|gb|ACV10169.1| Orn/DAP/Arg decarboxylase 2 [Jonesia denitrificans DSM 20603] Length = 1072 Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 71/447 (15%), Positives = 122/447 (27%), Gaps = 70/447 (15%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAVIKTLAHLGSGL 78 L +P ++ + +N +N V A KAN ++ G+G+ Sbjct: 615 LLDTYGSPLNIHNFDPLTRNITELTNTASHHGIRFAVYVARKANKTLNLVTAAHTQGAGI 674 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D+ S ELR+ LAA VP RIVFS KT D I ++++ E + A Sbjct: 675 DVASTRELRQTLAAGVPGPRIVFSAAIKTRDAI-TDALRNNVTISLDNLDEAHLVTTTAH 733 Query: 139 SLGKKAPIAFR----------------------VNPDINANTHKKISTGKKEDKFGIPIH 176 +LG A IAFR N + + Sbjct: 734 TLGLTAHIAFRLAITDPHIAPTRFGLPATDWLTWLTTTNHTHISVDGLHFHLNGYSATER 793 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 +A + I S+ + + + + Sbjct: 794 ATALRHAITTIDDLRARGCPASFIDMGGGVPMSYLDNGEQWHQFWAAVDRQPASSCEVTW 853 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVAD-------------- 282 G + PS S Y G I+ P Sbjct: 854 RGDRLGLVDAGADRPSPSVYPYYQDVVRGEWLENIVTSPVAAPTVHDGHGSDRPTPDTTI 913 Query: 283 ----------------------VGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 G+ + +V+ K ++D ++ +R T D Sbjct: 914 ADALASRDIELRCEPGRSMLDGCGMTLARVMFRKHTSDGVPLVGLAMNRTQVRSTSVDFL 973 Query: 321 HEINYIVNPAGDRLHIHAD--IVGPICETGDFIALNRKIAL--PRPGDLLYIEKTGAYGA 376 + + + VG C + +A R + GD++ TG Y Sbjct: 974 VDPVLVRPTDAGEPNEPGSGFFVGAYCIEEELLARRRFVFPQGVAVGDIVAFPNTGGYLM 1033 Query: 377 ---VQSGTYNSRLLIPEIMVNGSQFHI 400 + L I+ G ++ + Sbjct: 1034 HIVESASH--QIPLAANIVATGDRWEL 1058 >gi|300934325|ref|ZP_07149581.1| putative diaminopimelate decarboxylase [Corynebacterium resistens DSM 45100] Length = 517 Score = 72.2 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 65/453 (14%), Positives = 125/453 (27%), Gaps = 81/453 (17%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAVIKTLAHLGSGLDIVSE 83 PF+ + N F+ + + +A KAN ++ I +A G+D+ S Sbjct: 56 GGPFHVLNPAQFRSNLRGFAEVCKAVGVKATIYFARKANKSECWIPVVAEEAHGVDVASG 115 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E A++ VPA +V +G K ++LAL+ G V+S SEL ++ A + Sbjct: 116 PEFIGAISGGVPAHNLVVTGAEKPESLLELALRHGSL-LVVDSPSELFRVSTLAAKVETG 174 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + + + T + T E + + ++G Sbjct: 175 SQAQLLLRLLPDTQTDSRFGTSASEWMWALASLSEKQRTCINCAGASFHLNGYSAEERGH 234 Query: 204 -------------------------------IDQIESFHKAFKLLRDLTQQLR-SNGHNI 231 ++ + ++ + ++R +G + Sbjct: 235 QAHLALDFLEVLKTDGWRVHTLDIGGGFSIQYCDNTAWEEFSRVALGDSPKVRAFHGGYL 294 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKII--------LEPGRFLVADV 283 G Q + + LEPGR L+ Sbjct: 295 PRTTYPYGGQRNNGPAMLSEVLMTLHPDSEQATYGTLAERLRVGNIRLGLEPGRALLNGC 354 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN--------------- 328 G+ V V +K+ D + + + Sbjct: 355 GMSVFPVQGVKERKDYCIITAAGLSMSLSEQWKGSEFLPDVTLWRAERGVEQTEVQTAEG 414 Query: 329 -----------------PAGDRLHIHADIVGPICETGDFIALNRKIAL---PRPGDLLYI 368 + A + G C D + R + L P+ GDLL Sbjct: 415 KIRQTTKEQVDARRNATKEREDEPTAACVGGSSCMEYDMLTW-RIVPLQRRPQRGDLLIY 473 Query: 369 EKTGAYGAVQS-GTYNSRLLIPEIMVNGSQFHI 400 T Y ++ ++ L V + + Sbjct: 474 HNTAGYQMDKNESEFHQLRLPMR-FVYDGEGTL 505 >gi|331011411|gb|EGH91467.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 174 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 67/165 (40%), Gaps = 6/165 (3%) Query: 229 HNIQHIDVGGGLGIAYHSDHRPPSSS--DYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 ++ I++GGG Y + + + + + FG+ +IILEPGR L+++ GIL Sbjct: 4 IVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEIILEPGRSLISNAGIL 63 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 V++V+ + + + + I + + I GP C+ Sbjct: 64 VSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCD 123 Query: 347 TGDFIALNRK--IAL-PRPGDLLYIEKTGAYGAVQSG-TYNSRLL 387 + D + N K + L GD +Y TGAY S +N Sbjct: 124 SADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGFPP 168 >gi|40642984|emb|CAD91418.1| ornithine decarboxylase [Crassostrea gigas] Length = 186 Score = 71.4 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 2/107 (1%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I Y + M YA+K N + AV+K L+ +G D S+ E+ + Sbjct: 40 FFIGDLGDIIAKYQVWKETLPR--VMPFYAVKCNDDYAVLKLLSDIGVNFDCASKAEIMK 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 L V RI+++ K I A + + ++E EL + Sbjct: 98 VLDLGVDPSRIIYANPCKQNSFIKYAAKKNVEMMTFDNEDELHKVKA 144 >gi|289606991|emb|CBI60923.1| unnamed protein product [Sordaria macrospora] Length = 290 Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 59/210 (28%), Gaps = 12/210 (5%) Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + H+GSQ +++ A + +R I Sbjct: 87 ICFHVGSQTMSPDAYSNAMERVRGAIVDAGVTVDVIDVGGGFPSRYPGMTPPPLERFFET 146 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 + ++ EPGR L A+ +V +V + I D A Sbjct: 147 IHRAFESLPVSYSAELWAEPGRSLCAEYASVVVRVEHRR---GSELFINDGAYGSLFDAA 203 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAY 374 + + + P D + GP C+ D + + R GD I GAY Sbjct: 204 HIGWKYPVQLLRQPESDARDMDFSFWGPTCDDIDQMQGPFPLPADTRSGDYFEIGMLGAY 263 Query: 375 GAVQSGTYNSRLLIPEIMVNGSQFHIIRPR 404 G+ +N + R R Sbjct: 264 GSAMRTAFNGFG--------NGEDRPDRRR 285 >gi|126347857|emb|CAJ89577.1| putative decarboxylase [Streptomyces ambofaciens ATCC 23877] Length = 498 Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 5/99 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQAVIKTLAHLG 75 L L + +P I +N F + V +A KAN + A+++ LA Sbjct: 25 LHSLVDALGSPLNVLLPETIAENAERFRAVYRRHHLTGRVYFAHKANRSSALLRRLAAED 84 Query: 76 ---SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 G+D+ S ELR AL +RI+ +G Sbjct: 85 PAHVGVDVASPAELRHALGCGFTGDRIMATGPKDPEFLW 123 Score = 44.8 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%) Query: 338 ADIVGPICETGDFIALN-RKIA-LPRPGDLLYIEKTGAYGA 376 +VG +C D I + LPR GDLL T Y Sbjct: 414 VHLVGNLCLEADLITRRLVFLPALPRAGDLLAFVNTAGYAM 454 >gi|196016996|ref|XP_002118346.1| hypothetical protein TRIADDRAFT_62376 [Trichoplax adhaerens] gi|190579062|gb|EDV19168.1| hypothetical protein TRIADDRAFT_62376 [Trichoplax adhaerens] Length = 143 Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%) Query: 335 HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 +A + G C++ D + + GD +Y E+ GAY V + +NS Sbjct: 62 TTNAVLFGQTCDSLDLLLNECSLPKLNAGDWIYFEEVGAYSLVLATEFNSFKKP 115 >gi|218678018|ref|ZP_03525915.1| diaminopimelate decarboxylase protein [Rhizobium etli CIAT 894] Length = 94 Score = 71.0 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 62/81 (76%), Positives = 73/81 (90%) Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 VCYA+KANSNQAV+KTL LG+G+D+VSEGELRRALAA +PAERI+FSGVGKT E+D A Sbjct: 2 VCYAMKANSNQAVLKTLGRLGAGIDVVSEGELRRALAAGIPAERIMFSGVGKTPQEMDFA 61 Query: 115 LQSGIYCFNVESESELKTLNQ 135 L++GIYCFNVESE EL+ LNQ Sbjct: 62 LEAGIYCFNVESEPELEILNQ 82 >gi|73974222|ref|XP_858383.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 3 [Canis familiaris] gi|73974231|ref|XP_858568.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 6 [Canis familiaris] Length = 280 Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 65/238 (27%), Gaps = 16/238 (6%) Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 KFG + L A L +I GV H+ S + + + A R + G Sbjct: 1 MKFGTTLKNCRHLLECAKELDV-QIIGVKFHVSSACKESQVYVHALSDARCVFDMAGEFG 59 Query: 229 HNIQHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADV 283 + +D+GGG + P Y + F +A Sbjct: 60 FTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYVSSAFTLAVN 119 Query: 284 GILVTKVISIKKSAD----------KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR 333 I V + K + + + D F D D Sbjct: 120 IIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGIYGSFASKLSEDLNTIPEVHKKYKKDE 179 Query: 334 LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 + + GP C+ D I + + GD L + GA + +N Sbjct: 180 PLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAFNDFQRPAIY 237 >gi|148252222|ref|YP_001236807.1| putative ornithine/diaminopimelate PLP dependent decarboxylase [Bradyrhizobium sp. BTAi1] gi|146404395|gb|ABQ32901.1| Putative Ornithine/Diaminopimelate PLP Dependent decarboxylase [Bradyrhizobium sp. BTAi1] Length = 456 Score = 70.6 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 70/439 (15%), Positives = 130/439 (29%), Gaps = 62/439 (14%) Query: 11 LHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVI 68 L L +P + ++ N + G+ + Y KAN + A++ Sbjct: 25 LTENGAILHGWIAHHGSPTHLIWPEELQSNIASLKCVLQDSGVAHAIYYGAKANKSPALL 84 Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 G+G+D+ S ELR A +IV +G KT + + E Sbjct: 85 AAALGAGAGIDVSSLYELREARRVGADGAQIVATGPAKTAAFHRELIAANALISVDSPEE 144 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 + + + + + +FG+P I A + Sbjct: 145 LDDLIGSLPSDEREPVCPVLLRLRPHS----------QAQSRFGMPAAAIRRCLARIADE 194 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 +++ G+ H+ S +A + L + R+ G + + ID+GGGL Y Sbjct: 195 RRLRLDGLHFHL--GGYDWPSRAQAIDEVAGLIGECRARGFSPRMIDIGGGLPAQYVDHD 252 Query: 249 RPPSS------------------SDYASLIHQYFGNLQ--------------------CK 270 + Y + Sbjct: 253 VYQAHLAAQAPEDYRTREVPASFYPYGGRLSAATWLRCLLRAPLADGRSIADYLTDEGLV 312 Query: 271 IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI----NYI 326 + +EPGR L + V +V +K A V+ + T + + + Sbjct: 313 LAMEPGRALADHAALSVFRVTRVKALACDAHVLFVEGSSFSACETWFRSEFLVDPILIPR 372 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIA---LPRPGDLLYIEKTGAYGAV-QSGTY 382 I A + G C D ++ NR + P+ GDLL T Y + Sbjct: 373 DARPAGAPPIRAYLAGHSCLDDDVLS-NRWLTFPVAPQAGDLLVYANTAGYQMDLLENQF 431 Query: 383 NSRLLIPEIMV-NGSQFHI 400 + + + V + + Sbjct: 432 HRHPMPNRLCVAQDGKGQL 450 >gi|294636689|ref|ZP_06715037.1| pyridoxal-dependent decarboxylase [Edwardsiella tarda ATCC 23685] gi|291090098|gb|EFE22659.1| pyridoxal-dependent decarboxylase [Edwardsiella tarda ATCC 23685] Length = 143 Score = 70.6 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Query: 18 LEKLAHVVQTPF--YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 + KL +PF Y Y TA+ + + + + YA KAN+ +++TLA Sbjct: 9 IRKLQQQH-SPFCAYLYDLTALRERIADMKHRLP-IGCELFYAAKANAEAPILRTLAPWV 66 Query: 76 SGLDIVSEGELRRALAAPVP 95 G + S GEL + Sbjct: 67 DGFEAASGGELAWLAQQSLD 86 >gi|47216265|emb|CAG05961.1| unnamed protein product [Tetraodon nigroviridis] Length = 282 Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 1/112 (0%) Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI 336 R ++ DV + + + + ++N + Y + + ++ Sbjct: 157 RAVMDDVTKDEGRESTERLMMYYLNEGVYGSLNWLLTDPDYIEIKPYLHGAEESREQ-RY 215 Query: 337 HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + I GP C+ D I N I R GD IEK GAY YN Sbjct: 216 RSVIWGPTCDCVDKIIDNYMIPDLRVGDWFLIEKIGAYSISSRTDYNGFEKA 267 Score = 69.5 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 7/70 (10%) Query: 22 AHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 + PF+ + + +L + + + YA+K NS V+KTL+ LG+ Sbjct: 22 IKEFDSMGGEGPFFVVDLDTLVQKHLKWLSNLPRVKP--FYAVKCNSTPTVLKTLSALGT 79 Query: 77 GLDIVSEGEL 86 G D S+ L Sbjct: 80 GFDCASKNLL 89 >gi|300175606|emb|CBK20917.2| unnamed protein product [Blastocystis hominis] Length = 356 Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 52/153 (33%), Gaps = 2/153 (1%) Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 G G S++ P+ + L + +++ + + I + Sbjct: 201 GTGTQKLSENDIPTLALLKDLSKKVELSIEASRFFTEKAYTIYTRIIGKKVKHFGEIPHY 260 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + V + + R + + I V+ + D + + GP C++ D + N + Sbjct: 261 LYYTDNGVYCSFYNRHINNEPLNPIPIKVSSSTDDSLYESTLFGPTCDSIDTLGTNFLLP 320 Query: 359 LPRPGDLLYIEKTGAY-GAVQSGTYNSRLLIPE 390 GD L E+ G Y + S +N E Sbjct: 321 DLEIGDWLKFEECG-YLCSNYSPQFNGFEDPAE 352 >gi|294886251|ref|XP_002771632.1| Dus1p, putative [Perkinsus marinus ATCC 50983] gi|239875338|gb|EER03448.1| Dus1p, putative [Perkinsus marinus ATCC 50983] Length = 720 Score = 70.2 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 98/337 (29%), Gaps = 16/337 (4%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR--- 87 +E+ + + + YA+K N ++KTL HLG D + E++ Sbjct: 47 LLDLDQLERQMKKWKELLPRI--IPYYAMKCNPEPMLVKTLYHLGCRFDCATINEMKLVK 104 Query: 88 -RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + + + + + + + A+ + K A Sbjct: 105 SILSENMGDPNAHIINEMMASHIVYANPNKLPSHLIGARDLGVEYIVADSALEIAKIAHY 164 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 + + KFG + ++ + G+ + GV H+GS Sbjct: 165 HPTAKLLLRLACVDNNAQCPMSSKFGASLGVAVNVLLEEAVNHGLNVVGVSFHVGSGCSD 224 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ---- 262 + S KA R++ S I GG + P + A++++ Sbjct: 225 VHSITKALVDAREVFDAAASRFGMKLSILDIGGGFQGVDREGSPLNFKSMATVVNSLLDT 284 Query: 263 -YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD----KTFVILDVAMNDFMRPTLY 317 + + +II EPGR+ V + + A + Sbjct: 285 LFPDPDEVRIIAEPGRYEWWKSIGSPRYVTAPMVDQSELAFRMMTRKYGAQFCYTPMMHA 344 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPIC-ETGDFIAL 353 ++ + + + C + GD I Sbjct: 345 KSFATSKKYREKNFETAPGDSPLAAQFCGDDGDVIVE 381 >gi|119627885|gb|EAX07480.1| arginine decarboxylase, isoform CRA_l [Homo sapiens] gi|193784130|dbj|BAG53674.1| unnamed protein product [Homo sapiens] Length = 309 Score = 70.2 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 78/242 (32%), Gaps = 18/242 (7%) Query: 158 THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 T S KFG+ + L A V++ GV HIGS +++ ++ Sbjct: 7 TDDSHSLSCLSLKFGVSLKSCRHLLENAKKH-HVEVVGVSFHIGSGCPDPQAYAQSIADA 65 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL--IHQYFGNLQCKIILEP 275 R + + GH + +D+GGG + R + + + I E Sbjct: 66 RLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAEL 125 Query: 276 GRFLVADVGILVTKVISIK---------------KSADKTFVILDVAMNDFMRPTLYDAY 320 GR+ V + +I+ K S + + + F + Sbjct: 126 GRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNIC 185 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG 380 P+ ++ + + GP + D +A + GD L + GAY Sbjct: 186 PTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 245 Query: 381 TY 382 + Sbjct: 246 PF 247 >gi|210613889|ref|ZP_03289953.1| hypothetical protein CLONEX_02166 [Clostridium nexile DSM 1787] gi|210150914|gb|EEA81922.1| hypothetical protein CLONEX_02166 [Clostridium nexile DSM 1787] Length = 74 Score = 69.9 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 21/65 (32%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + + TP Y + +N D + A KA S V +A SG Sbjct: 4 NELPTPCYVIQEEQLRQNLEILKGVMDRTGCKILLAQKAFSMYEVYPLIAQYLSGTTASG 63 Query: 83 EGELR 87 E R Sbjct: 64 LYEAR 68 >gi|54024534|ref|YP_118776.1| putative decarboxylase [Nocardia farcinica IFM 10152] gi|54016042|dbj|BAD57412.1| putative decarboxylase [Nocardia farcinica IFM 10152] Length = 469 Score = 69.9 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAVIKTLAHLGSGLDIVSE 83 TP + + +N + D +CYA K N + A+ + G G+D+ S Sbjct: 33 GTPAHVVFPQVLAENVGALAAVLDRSPVRSRMCYAHKVNRSPALARAAERCGIGIDVASP 92 Query: 84 GELRRALAAPVPAERIVFSGV 104 GEL A AA RI +G Sbjct: 93 GELANARAAGFGPARIEVTGP 113 >gi|241997404|ref|XP_002433351.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215490774|gb|EEC00415.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 357 Score = 69.9 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 80/218 (36%), Gaps = 11/218 (5%) Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI- 242 ++ G K+ G+ H+G+ + F ++ R + + GH + +D+GGG Sbjct: 84 QIASFMGFKVVGIAFHVGAAYRCPDIFARSIAEARSVFDEGIRIGHPMTVLDIGGGFTGG 143 Query: 243 -AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS----- 296 H + ++ + + ++I EPG+F V LVT+V++ ++ Sbjct: 144 LRSHDKLLKLCETIRLAVDEYFPASSGVRVIAEPGQFFVTSAYTLVTRVVAERRKDIEIS 203 Query: 297 ----ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 K I + N R + + P + + + G C D I Sbjct: 204 GKLLNHKDIFINESLCNCINRNLFRFMDIGMRPLNPPYERPCNFLSTVWGATCNPLDCIL 263 Query: 353 LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPE 390 + + + L ++ GAY V + +N P Sbjct: 264 DKQPLFEVFVNEWLLMDNMGAYTLVGASGFNGFGFPPV 301 >gi|307326215|ref|ZP_07605412.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] gi|306888158|gb|EFN19147.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113] Length = 502 Score = 69.9 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 5/99 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQAVIKTLAHLG 75 L L + +P I +N F + + V +A KAN + ++ + LA Sbjct: 26 LHSLVDALGSPLNVLLPERIAENTERFRDVYRRHHLAGRVYFAHKANRSSSLARRLAAED 85 Query: 76 ---SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 G+D+ S GELR L ERI+ +G Sbjct: 86 PAAVGVDVASLGELRHVLGCGFTPERIMATGPKDPEFLW 124 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 5/73 (6%) Query: 332 DRLHIHADIVGPICETGDFIALN-RKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIP 389 D + +VG +C D I + LPR GDLL T Y + R + Sbjct: 412 DEEPVGVYLVGNLCLEADLITRRMVFLPRLPRTGDLLAFANTAGYAMDFHAHHAQRQPVA 471 Query: 390 ---EIMVNGSQFH 399 ++ G + Sbjct: 472 RTVAVVREGGSWR 484 >gi|330863542|emb|CBX73658.1| hypothetical protein YEW_CV11700 [Yersinia enterocolitica W22703] Length = 111 Score = 69.9 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 5/100 (5%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L L P + Y I N FD ++ +A KA SN +++ + G Sbjct: 16 NLIALPERFGCPVWAYDGEIITSKINQLWN-FD----VIRFAQKACSNIHILRLMHEQGV 70 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 +D VS GE+ RAL A R + I I L Sbjct: 71 KVDSVSLGEIERALQAGFQPGRNLLRLSLPPICWIRLPYC 110 >gi|325303748|tpg|DAA34383.1| TPA_inf: ornithine decarboxylase [Amblyomma variegatum] Length = 308 Score = 69.9 bits (169), Expect = 9e-10, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 118/293 (40%), Gaps = 15/293 (5%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PF+ I + YA+K N + AV++ LA LG G D S+ E+ Sbjct: 29 PFFVVDVGDIVYKVKLWK--LKIPRVEPFYAVKCNGDPAVLELLAGLGLGFDCASKAEID 86 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A V + RI+++ KT I A G+ ++E EL + + + Sbjct: 87 TVRAVGVASNRIIYANPCKTRSYIKHAAAVGVDLMTFDNELELHKVRGLYPAARLVLRLR 146 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 S + KFG + L + A +L + + GV H+GS + Sbjct: 147 VD----------DTGSVCRLGVKFGCELADAQHLLSVARSLG-LNVVGVSFHVGSNSREP 195 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSD--HRPPSSSDYASLIHQYFG 265 ++F +A + R + Q + G + +D+GGG + + +SL + Sbjct: 196 QTFARAIEDARQVFDQGLAMGFPMTLLDIGGGYPGDRGFQKLFDQIAHTINSSLAEHFPE 255 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 +II EPGRF V+ L T VI+ ++++ + L+ + T++D Sbjct: 256 ESGVRIISEPGRFFVSSAFTLYTTVIAKRENSGRPMYYLNDGVYGSFNCTVFD 308 >gi|86651670|gb|ABD14423.1| ornithine decarboxylase 1 [Homo sapiens] Length = 154 Score = 69.5 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 2/100 (2%) Query: 39 KNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAER 98 K +L + A YA+K N ++A++KTLA G+G D S+ E++ + VP ER Sbjct: 1 KKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQSLGVPPER 58 Query: 99 IVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 I+++ K + +I A +G+ +SE EL + + Sbjct: 59 IIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHP 98 >gi|19749310|gb|AAG45731.2|AF229441_2 Y4yA [Sinorhizobium fredii] Length = 450 Score = 69.5 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 76/393 (19%), Positives = 121/393 (30%), Gaps = 59/393 (15%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF--DGMDTMVCYALKANSNQAVIKTLAHLG 75 L A +P A+ +N + + Y K N + +++ Sbjct: 27 LFDWAARHGSPLNLVWPDALRENLAALKGVLTERRVQHAIYYGAKGNKSPGLMQAALSAS 86 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 +GLD+ S ELR A R+V +G KT + +V+S EL+ L Sbjct: 87 AGLDVSSLYELRDARRLGADGARLVATGPAKTNAFHQALINCN-ALISVDSPEELEDLIH 145 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + PI R+ P + + +FG+P I + ++ G Sbjct: 146 GLPADAGQQPILLRLRP-----------RDQSKSRFGMPPDAIVHCLVRLAGEGRLRFDG 194 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-- 253 + H+ + A DL + R G ID+GGGL I Y R + Sbjct: 195 LHFHLSGYRRET--RVAALSEAADLIAEARRMGFFPGMIDIGGGLPIQYVDRARYDAHLA 252 Query: 254 ----------------SDYASLIHQYFGNLQ--------------------CKIILEPGR 277 Y S + + + +EPGR Sbjct: 253 AQAPEDYRTGKIPDSFYPYGSTLSAADWLHRLLEAEMNQGRSVAGYLAREGLTLAMEPGR 312 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI-NYIVNPAGDRLHI 336 L I V ++ +K + VI I + Sbjct: 313 ALADQAAITVFRISRVKAVGPDSHVIFVSFSACETWFASEFLIDPILVPATKATVQSPPV 372 Query: 337 HADIVGPICETGDFIALNRKI---ALPRPGDLL 366 A + G C D I+ NR + PR GDLL Sbjct: 373 RAYLAGHSCLDEDVIS-NRWLTFPTAPRAGDLL 404 >gi|207108770|ref|ZP_03242932.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori HPKX_438_CA4C1] Length = 193 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 67/193 (34%), Gaps = 16/193 (8%) Query: 228 GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 N+ ++ GGG I + ++ILEPG + G L+ Sbjct: 1 FRNMAWVNFGGGHHITRSDYNVNLLIQTI---KDFKERYHNIEVILEPGEAIGWQCGFLI 57 Query: 288 TKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD-------- 339 VI I D+ +LD + + M L Y V+ D I + Sbjct: 58 ASVIDIV-QNDQEIAVLDASFSAHMPDCLEMPYRPSILKVSAENDEELIEVEKGENQGAF 116 Query: 340 ---IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS 396 + GP C GDF+ + GD + + Y V++ ++N L ++ Sbjct: 117 SYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQ 176 Query: 397 QFHIIRPRMTFQE 409 F I ++++ Sbjct: 177 GFK-ILKNFSYED 188 >gi|196016994|ref|XP_002118345.1| hypothetical protein TRIADDRAFT_62375 [Trichoplax adhaerens] gi|190579061|gb|EDV19167.1| hypothetical protein TRIADDRAFT_62375 [Trichoplax adhaerens] Length = 176 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 22/54 (40%) Query: 335 HIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 A + G C++ D + + GD +Y E+TGAY +NS Sbjct: 96 EETAVLFGQTCDSLDCLMKECLLPKLNAGDWVYFEETGAYSLSLVSKFNSFKKP 149 >gi|296393202|ref|YP_003658086.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] gi|296180349|gb|ADG97255.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985] Length = 457 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 75/430 (17%), Positives = 124/430 (28%), Gaps = 44/430 (10%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG 77 L +++H F+ N F V +A KAN A + A G+G Sbjct: 32 LPEISHATGGAFHLLHPQTFAANLGAFQAVSARTGGTVYFAKKANKAAAWLTVCAERGAG 91 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE---------- 127 +D S ELR AL VP +R+V +G K+ + + LA ++G + Sbjct: 92 VDAASVPELREALRCGVPGQRVVVTGPAKSDELLLLACRAGALVAIDSLDELERAVALAD 151 Query: 128 -----SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 L ++ + + + + F + + I S Sbjct: 152 GEAALRVLFRVHPPRQPNSRFGMAVPERQAALVRIGQFRGRIVLEGFSFHLSGYDIASRA 211 Query: 183 AYASTLPGVKI----SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 A L + G S + + + R + + G Sbjct: 212 ELAGELIAECLAARARGHRADTISIGGGFPVRYVEAEDWARFQSEFRPEQCHARKTFSDG 271 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-----CKIILEPGRFLVADVGILVTKVISI 293 A + + +EPGR L+AD GI V V Sbjct: 272 FYPYHCDEPGARALEKILAHQADGAALEQRLAAAGIALSVEPGRALLADAGISVFPVQGF 331 Query: 294 KKS--------ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 K + + + R + G C Sbjct: 332 KWREAAPNEHAGGYGIATVAGTSLSLSEQWFGSEFLPDPALWPTTQHRQITPTCVGGASC 391 Query: 346 ETGDFIALNRKIALPRP---GDLLYIEKTGAYGAVQSGT---YNSRLLIPEIMVNGSQFH 399 D + RK+ LPRP GD L T Y ++ + P+ +V+ S Sbjct: 392 LDSDMLTW-RKVPLPRPPKRGDFLIYPNTAGYQ--MDSNESSFHDLPIPPKAVVDFSGAE 448 Query: 400 IIRPRMTFQE 409 PR +F+E Sbjct: 449 ---PRWSFEE 455 >gi|254497528|ref|ZP_05110320.1| truncated bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella drancourtii LLAP12] gi|254353245|gb|EET11988.1| truncated bifunctional aspartate kinase/diaminopimelate decarboxylase protein [Legionella drancourtii LLAP12] Length = 103 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +A TP Y Y++T A + +D + YA+KAN + ++KTL G Sbjct: 24 RLLGIAATH-TPCYVYNSTIQIARAKQLL-ALEAID-NLFYAIKANPHPTILKTLEQEGI 80 Query: 77 GLDIVSEGELRRALAAPVPAERI 99 G + VS EL R L +R Sbjct: 81 GFECVSMQELTRVLELFPNLDRT 103 >gi|238059755|ref|ZP_04604464.1| decarboxylase [Micromonospora sp. ATCC 39149] gi|237881566|gb|EEP70394.1| decarboxylase [Micromonospora sp. ATCC 39149] Length = 502 Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 2/96 (2%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLG 75 L L + +P I N F + + G V +A KAN + A ++ LA Sbjct: 25 LHDLVRALGSPLNVVLPNQIADNAAAFQSVYTGHHLRGEVFFAHKANRSAAFVRRLAATP 84 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 + +D+ S GEL+ AL A +R++ +G Sbjct: 85 AAIDVASLGELQHALGAGFAPDRVMATGPKTAEFLW 120 Score = 41.0 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%) Query: 342 GPICETGDFIALN-RKIA-LPRPGDLLYIEKTGAY 374 G +C D I + LPR GDLL T Y Sbjct: 409 GNLCLEADLITRRMVYLPTLPRVGDLLAFANTAGY 443 >gi|333022870|ref|ZP_08450934.1| putative Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. Tu6071] gi|332742722|gb|EGJ73163.1| putative Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. Tu6071] Length = 531 Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 2/93 (2%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAVIKTLAHLGSGL 78 L + +P + +N F A D V +A KAN + A+++ LA G+GL Sbjct: 28 LVEGLGSPLNVVLPQQVVENVRRFEAARDRHHLRGTVYFAHKANRSSALVRALATSGAGL 87 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 D+ S ELR L + +RI +G + Sbjct: 88 DVASLEELRHGLGSGFTPDRIGATGPKEPEFLW 120 Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 13/81 (16%) Query: 338 ADIVGPICETGDFIALN-RKIA-LPRPGDLLYIEKTGAYGAVQSGTYN--SRLLIPEIMV 393 + G +C D I ++ LP PG+LL T Y S N R ++ + Sbjct: 407 VYLHGNLCLESDLITRRLVQLPRLPAPGELLAFANTAGYAMDFSAQ-NAERRPPARKVAL 465 Query: 394 N---GSQFHIIRPRMTFQELI 411 G + R T E Sbjct: 466 ERTPGGGW-----RWTLDEQW 481 >gi|149602481|ref|XP_001520918.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus] Length = 146 Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 25/93 (26%) Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + + D F D + + GP C+ D I + + Sbjct: 10 FMYYMNDGVYGSFASNLAKSLNTVPEVHKKYKKDDPLFTSSLWGPSCDELDQIVESCLLP 69 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 GD L + GA + T+N Sbjct: 70 ELNVGDWLVFDNMGADTLREQSTFNDFQRPAIY 102 >gi|73974229|ref|XP_858529.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 5 [Canis familiaris] Length = 154 Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 2/111 (1%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ I K + + N + Y +K NS AV++ LA LG+G S+ E+ Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQIKP--FYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 V E I++ K + +I A + G+ ++E ELK + + + Sbjct: 98 VQELGVSPENIIYISPCKQVSQIKYAAKIGVNTMTCDNEVELKKIARNHPN 148 >gi|90083064|dbj|BAE90614.1| unnamed protein product [Macaca fascicularis] Length = 206 Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 25/93 (26%) Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + + D F D D + + GP C+ D I + + Sbjct: 92 FMYYMNDGVYGSFASKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLP 151 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 GD L + GA + +N Sbjct: 152 ELNVGDWLIFDNMGADSFHEPSAFNDFQRPAIY 184 >gi|28268541|emb|CAD62572.1| ornithine decarboxylase [Sphaerechinus granularis] Length = 115 Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F+ + + + + ++ YA+K N + V+K LA L G D S+ E++ Sbjct: 42 FFIGDLGDVIQKHRKWLRNLPRVEP--HYAVKCNPDVHVLKLLAGLNIGFDCASKNEIQE 99 Query: 89 ALAAPVPAERIVFSGV 104 L V RI+F+ Sbjct: 100 ILKIGVSPSRIIFANP 115 >gi|330946400|gb|EGH47481.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2 [Pseudomonas syringae pv. pisi str. 1704B] Length = 215 Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 6/193 (3%) Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG-HNIQHIDVGGGLGIAYHSDHRPP 251 G+ H+GSQ I + A ++ + ++L+ ++ I++GGG Y + Sbjct: 21 PYGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSL 80 Query: 252 SSS--DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + + + FG+ +IILEPGR L+++ GILV++V+ + + + Sbjct: 81 ETYAEEIIRFLKEDFGDDLPEIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDV 140 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK--IAL-PRPGDLL 366 + I + + I GP C++ D + N K + L GD + Sbjct: 141 GKFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRM 200 Query: 367 YIEKTGAYGAVQS 379 Y TGAY S Sbjct: 201 YWLSTGAYTTSYS 213 >gi|73974235|ref|XP_858656.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor isoform 8 [Canis familiaris] Length = 292 Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 25/93 (26%) Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + + D F D D + + GP C+ D I + + Sbjct: 157 FMYYMNDGIYGSFASKLSEDLNTIPEVHKKYKKDEPLFTSSLWGPSCDELDQIVESCLLP 216 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 GD L + GA + +N Sbjct: 217 ELNVGDWLIFDNMGADSLHEPSAFNDFQRPAIY 249 Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 F+ I K + + N + Y +K NS AV++ LA LG+G S+ Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQIKP--FYTVKCNSTPAVLEILAALGTGFACSSK 92 >gi|302519673|ref|ZP_07272015.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB78] gi|302428568|gb|EFL00384.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB78] Length = 220 Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 49/148 (33%), Gaps = 6/148 (4%) Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 ++ GR L+A G L+ +V ++ + + Sbjct: 61 YALVTGFGRSLLAGHGFLLARVEYVRAMGGRRLAVTHAGTRMAGHACGRRLAAYDAQ--G 118 Query: 329 PAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + + D+ GP G+ +A ++ GD L + TGAYG + Y+S Sbjct: 119 RPKEGPALAQDLAGPAQFDGELLASGAELPELEQGDWLAVLDTGAYGFARHQAYDSLTRP 178 Query: 389 PE----IMVNGSQFHIIRPRMTFQELIE 412 G +F +R T E + Sbjct: 179 GIHGFAAGAEGVRFATVRAAQTLAEFVA 206 >gi|308485210|ref|XP_003104804.1| hypothetical protein CRE_23889 [Caenorhabditis remanei] gi|308257502|gb|EFP01455.1| hypothetical protein CRE_23889 [Caenorhabditis remanei] Length = 485 Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 60/372 (16%), Positives = 109/372 (29%), Gaps = 38/372 (10%) Query: 22 AHVVQT--PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL-GSGL 78 A + PF+ AIE+ + YA+ N++ + + L++ Sbjct: 54 AASCGSQQPFFVMDVAAIERRLEALRVMLPRIRPN--YAVACNADPVLARVLSNNIDVNF 111 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 ++ + EL R +F T I A+ SG F VE+E ++ + + Sbjct: 112 EVSNSAELE-LTNLYSEPTRSIFCSQLMTRKAIKTAVLSGCMTFVVENEKQMTDVMNASP 170 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 I + E FG + ++ + L ISG+ + Sbjct: 171 EAEIVIGICLSYSSG--------------EVPFGCSVDELEEILEMGHLLG-ANISGIYL 215 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 +G + + H + + A + + Sbjct: 216 ELGVRASLHDYIHALHDASSMIVTANEKFLSLRYVTFGNLAIPTAEDGSVNNNDFISFCN 275 Query: 259 LIHQYFGNLQCKII---LEPGRFLVADVGILVTKVISIK-------KSADKTFVILDVAM 308 +++ L I GRFLV + L T VI + + D + V Sbjct: 276 AMNETICELFDDSIEFSANIGRFLVTNAFALCTNVIGKRALDAKFITNDDFDDGVGFVYQ 335 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHAD-------IVGPICETGDFIALNRKIALPR 361 + + + D D I+GP + D K R Sbjct: 336 TNDGVYGSFGCKQMDINPLCKPLDVQKESVDEQLHFGTILGPTLDCTDVAQRITKCRQLR 395 Query: 362 PGDLLYIEKTGA 373 G+ L E+ GA Sbjct: 396 VGEWLVWEQMGA 407 >gi|330891073|gb|EGH23734.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. mori str. 301020] Length = 122 Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 3/118 (2%) Query: 283 VGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE--INYIVNPAGDRLHIHADI 340 G +V+ K S + F++ + F P H G + Sbjct: 1 CGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQGHDHPVIHVPCAPATGASEEQAYTV 60 Query: 341 VGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSG-TYNSRLLIPEIMVNGSQ 397 VG +C D ++ + + GDLL + GAYG S + + V + Sbjct: 61 VGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGYNISHVDFLCHPRPVQHFVRNGE 118 >gi|3283904|gb|AAC25391.1| antizyme inhibitor [Homo sapiens] Length = 176 Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 25/93 (26%) Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + + D F D D + + GP C+ D I + + Sbjct: 40 FMYYMNDGVYGSFASKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLP 99 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 GD L + GA + +N Sbjct: 100 ELNVGDWLIFDNMGADSFHEPSAFNDFQRPAIY 132 >gi|255547510|ref|XP_002514812.1| ornithine decarboxylase, putative [Ricinus communis] gi|223545863|gb|EEF47366.1| ornithine decarboxylase, putative [Ricinus communis] Length = 203 Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 2/148 (1%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 PFY + +S+ + YA+K N+ A++ LA LG+ D S+ E+ Sbjct: 55 PFYILDIGVVISLVEKWSHHLPHVKP--FYAVKRNNESALLIVLATLGANFDCASQAEIE 112 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 L + +RI+++ K++ I A + G+Y +S+ E+ + + Sbjct: 113 AILGLGISPDRILYANPCKSVSHIKYAARVGVYLTTFDSKEEVDKIRKWHPQCSLLLRAE 172 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPI 175 + + + ++ Sbjct: 173 IQNDKSSWIHLAANMAHIFLRKFLEYTH 200 >gi|227548363|ref|ZP_03978412.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079561|gb|EEI17524.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length = 172 Score = 67.2 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLGS 76 + L +P + +E + A G+D V +A KAN + + G Sbjct: 38 QSLLETYSSPVNVLNAAPMESHIDELVAAGASRGVDVRVFFARKANKGLTFVDAVRDAGH 97 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 G+D+ S ELR+ + VP ERI+ S KT + + LA+ G Sbjct: 98 GVDVASFNELRQVIDRGVPGERIIVSAAIKTDELLRLAIDHG 139 >gi|255018554|ref|ZP_05290680.1| hypothetical protein LmonF_14096 [Listeria monocytogenes FSL F2-515] Length = 54 Score = 67.2 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 14/41 (34%) Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAF 48 EG L V KLA TP Y Y I F F Sbjct: 14 EGHLEIGGVDTLKLADKYGTPLYVYDVALIRDRARGFKKTF 54 >gi|154322364|ref|XP_001560497.1| hypothetical protein BC1G_01329 [Botryotinia fuckeliana B05.10] gi|150850576|gb|EDN25769.1| hypothetical protein BC1G_01329 [Botryotinia fuckeliana B05.10] Length = 302 Score = 67.2 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 98/314 (31%), Gaps = 37/314 (11%) Query: 72 AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 LG G D S E+ L+ I+F+ K + + A G+ ++ EL Sbjct: 1 MQLGVGFDCASVEEMHTVLSLGADPGSIIFANPCKAPEALAFAYNVGVRRTTFDNLDELD 60 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 ++N+ + I + + DK+G P+ +L A L Sbjct: 61 SINKYMPNAQLMLRIF----------ANDNSALVALGDKYGAPLESTQALLVRAKRLG-- 108 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 S KA + R + S G +++ +D+GGG + + Sbjct: 109 ----------SGASDPAVIRKAVEHSRVVWDIAESLGFSLRIVDIGGGFQSTESAFEKMA 158 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK------------KSADK 299 + A + Q I EPGRF LV K+I+ + Sbjct: 159 VAVSSAISEAAF--PEQTTFIAEPGRFYARSAFTLVCKIIARRVSTTIESSKTLEMLYQN 216 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA- 358 + + + A + I GP C++ D ++ + Sbjct: 217 DGIYGNFMNGLIEKEEFMPTLIRSKLNTTMARKTGNHTYKIWGPTCDSTDCVSRSTTFGC 276 Query: 359 LPRPGDLLYIEKTG 372 + GD L + G Sbjct: 277 EVKIGDFLVYKNMG 290 >gi|119628015|gb|EAX07610.1| hCG1787701, isoform CRA_b [Homo sapiens] Length = 172 Score = 67.2 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Query: 343 PICETGD-FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 P+C+ D + ++ GD L GAY + S ++N Sbjct: 129 PMCDAFDRLFLEDVRLPELDVGDWLVFPSMGAYMSSMSSSFNGF 172 >gi|160888524|ref|ZP_02069527.1| hypothetical protein BACUNI_00941 [Bacteroides uniformis ATCC 8492] gi|270294889|ref|ZP_06201090.1| arginine decarboxylase [Bacteroides sp. D20] gi|317477883|ref|ZP_07937068.1| arginine decarboxylase [Bacteroides sp. 4_1_36] gi|156861838|gb|EDO55269.1| hypothetical protein BACUNI_00941 [Bacteroides uniformis ATCC 8492] gi|270274136|gb|EFA19997.1| arginine decarboxylase [Bacteroides sp. D20] gi|316905956|gb|EFV27725.1| arginine decarboxylase [Bacteroides sp. 4_1_36] Length = 630 Score = 67.2 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 71/340 (20%), Positives = 113/340 (33%), Gaps = 35/340 (10%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L++L +Q P ++ F A D + Y +K N Sbjct: 42 VDLKELVDELQLRDVAAPVLVRFPDILDNRIEKVSCCFRQAADEYGYKGENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + + G GL+ S+ EL + +V K I+LA Sbjct: 102 QMRPVVEEMINHGKKFNLGLEAGSKPELHAVIGVNTDPGSLVVCNGYKDESFIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +EL + + A L K I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKLNELNLIAKMAKQLKVKPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + HIGSQI +I A + QL G NI+ + Sbjct: 222 SELLEALDFLEKKDMKDCLKLIHFHIGSQITKIRRIKNALREASQFFVQLNKMGFNIEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQY--------------FGNLQCKIILEPGRFLV 280 D GGG+G+ Y S S I +Y G II E GR L Sbjct: 282 DTGGGMGVDYDGTRSSSSESSVNYSIQEYVNDVVSTFVDVADKHGFPHPNIITETGRSLT 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 A +L+ +V+ + + LYD + Sbjct: 342 AHHSVLIFEVLETASLPEMDDDWEPGEDAHELVKELYDIW 381 >gi|83941446|ref|ZP_00953908.1| hypothetical protein EE36_04418 [Sulfitobacter sp. EE-36] gi|83847266|gb|EAP85141.1| hypothetical protein EE36_04418 [Sulfitobacter sp. EE-36] Length = 150 Score = 67.2 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 46/153 (30%), Gaps = 10/153 (6%) Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + ++ LEPG + L T V+ + ++ + +Y Sbjct: 1 MKTLSDTYGVQVYLEPGEAAITGAATLETTVLDTLHNGKNLAIVDSSIEAHMLDLLIY-- 58 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 A + I G C GD + A +PGD + + Y V+ Sbjct: 59 ----REPAKVAPNTGDHDWMICGKSCLAGDIFGEFKFDAPLKPGDRISFQDAAGYTMVKK 114 Query: 380 GTYNSRLLIPEIMVN--GSQFHIIRPRMTFQEL 410 +N + I + +R +++ Sbjct: 115 NWFNGVKMPG-IAIRELDGTITSVRS-FDYEDF 145 >gi|329934469|ref|ZP_08284548.1| lysine/ornithine decarboxylase [Streptomyces griseoaurantiacus M045] gi|329306065|gb|EGG49920.1| lysine/ornithine decarboxylase [Streptomyces griseoaurantiacus M045] Length = 508 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 90/246 (36%), Gaps = 8/246 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQAVIKTLAH-- 73 L LA + +P A+ N F + V +A KAN + A+++ LA Sbjct: 26 LHSLADALGSPLNVLLPEAVAANAERFRSVLRRHHLAGRVYFAHKANRSSALVRRLAACD 85 Query: 74 -LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G+D+ S ELR ALA+ +R++ +G A + E + Sbjct: 86 TAAVGIDVASLEELRHALASGFSGDRVMATGPKDPEFLWLAARVGATVNLDSPGELDELA 145 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS-LYAYASTLPGV 191 R L + + + + + +FG P+ + A V Sbjct: 146 ALVRKYGLARTDVLVRLSGFESDPGPGAGTRLLARRSRFGTPVAEAEKLWTALERHADSV 205 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 ++ G+ H+ + + ++ A + L + R+ G + +D+GGG G AY D Sbjct: 206 RLVGLAHHLDTTGLEEKAR--ALERCVLLMDECRARGLAPRAVDIGGGFGAAYVEDAGEW 263 Query: 252 SSSDYA 257 A Sbjct: 264 ERWTTA 269 Score = 44.8 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Query: 338 ADIVGPICETGDFIALN-RKIA-LPRPGDLLYIEKTGAY 374 +VG +C D I + LPRPGDLL T Y Sbjct: 424 VHLVGNLCLEADLITRRLVFLPRLPRPGDLLAFVNTAGY 462 >gi|291461062|ref|ZP_06600270.1| putative Orn/DAP/Arg decarboxylase [Fusobacterium periodonticum ATCC 33693] gi|291379154|gb|EFE86672.1| putative Orn/DAP/Arg decarboxylase [Fusobacterium periodonticum ATCC 33693] Length = 211 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 20/156 (12%) Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 N I +E GR++ A G V KV+ K S T++IL +N F++P++ + Sbjct: 55 YNPDITIFIETGRYVTAKSGFYVMKVLDKKVSYGTTYLILKNTLNGFIKPSIIKLVSKYE 114 Query: 325 YIVNPAGDR------------------LHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 + + +VG +C D IA + + GD++ Sbjct: 115 KENPVSWEPLFTSKDAFEILTFKEETDKKEKVTLVGNLCTATDVIAEDIVLPSMDCGDVI 174 Query: 367 YIEKTGAYGAVQS-GTYNSRLLIPEIMVN-GSQFHI 400 I G+Y AV S ++S+ E+ ++ I Sbjct: 175 VINNAGSYAAVLSPMQFSSQEKPVEVFLSVDDSVKI 210 >gi|290962894|ref|YP_003494076.1| lysine/ornithine decarboxylase [Streptomyces scabiei 87.22] gi|260652420|emb|CBG75553.1| putative lysine/ornithine decarboxylase [Streptomyces scabiei 87.22] Length = 489 Score = 66.8 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 2/96 (2%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQAVIKTLAHLG 75 L L + +P I N F D +C+A KAN ++++ L Sbjct: 27 LHTLVDALGSPLNVLLPDQIADNVRRFRAVLDRHRLAGRICFAHKANRAGSLVRRLTTTE 86 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 + LD S GELR AL + RI+ +G Sbjct: 87 AALDAASLGELRHALGSGFTGSRIMATGPKDPRFLW 122 Score = 46.4 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 51/147 (34%), Gaps = 9/147 (6%) Query: 269 CKIILEPGRFLVADVGILVTKV-ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + +EPGR LV G+ + KV + V L + D + Sbjct: 333 YDLCVEPGRALVDQCGLTLGKVLEVRPTDGGEPMVRLAMNAGDVGLEDHGVLMDPVVLPR 392 Query: 328 NPAGDRLHIHADIV--GPICETGDFIALN-RKIA-LPRPGDLLYIEKTGAYGAVQSGTYN 383 +PA + G +C D + + LPRPGD+L T Y + T+ Sbjct: 393 DPAPRGRAGPVGVHLLGNLCLEADLLTRRTVFLPRLPRPGDVLAFVNTAGYCMDFAATHA 452 Query: 384 -SRLLIPEIMVNGSQFHIIRPRMTFQE 409 + L ++ V+ + R E Sbjct: 453 QQQPLARKVAVHEENGRL---RWCLDE 476 >gi|195363107|ref|XP_002045570.1| GM11484 [Drosophila sechellia] gi|194130730|gb|EDW52773.1| GM11484 [Drosophila sechellia] Length = 114 Score = 66.8 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 10/88 (11%) Query: 4 FKYFEGSLHAENV----SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 +Y+E L+ V LE L +++E+ + ++ YA+ Sbjct: 8 IQYYEEELNIRKVIEQADLENLDQA----LNICDLSSLERKLRLWHKLMPRIEP--HYAV 61 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELR 87 K N + V+K LA LG+G D S+ EL+ Sbjct: 62 KCNDDPVVVKFLADLGTGFDCASKNELK 89 >gi|37499419|gb|AAQ91788.1| Ornithine Decarboxylase [Metarhizium anisopliae] Length = 276 Score = 66.4 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 94/289 (32%), Gaps = 33/289 (11%) Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S+GE+ + LA ERI+++ +T + +G+ ++ EL + + Sbjct: 1 GFDCASKGEIEQVLAMGTTPERIIYAQPCETNSYVRFVKNAGVKQMTFDNADELYKIAKL 60 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I T S + KFG + SL A A L + + GV Sbjct: 61 YPEAELFLRIM----------TDDASSLCRLSMKFGATMDTTESLLAVAKNLG-LNVVGV 109 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GS +F+KA + + QQ G ++ +DVGGG Sbjct: 110 SFHVGSGASDPLAFYKAVRDAHAVFQQAAEFGFTMRTLDVGGGFCGDTFEQMSSVLRDAL 169 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTK------VISIKKSADKTFVILDVAMND 310 + II EPGR+ V+ + V V ++ + Sbjct: 170 ---DESFPAGNGIDIIAEPGRYYVSTAFTIACNIIARRTVEDPTLDGKGYMVYINDGVYG 226 Query: 311 FMRPTLYDAYHE-------------INYIVNPAGDRLHIHADIVGPICE 346 ++D H N + I GP C+ Sbjct: 227 NFSSIMFDHQHPVAKILRSSGRTLYNTATANACNAGEGVEYSIWGPTCD 275 >gi|318079448|ref|ZP_07986780.1| lysine/ornithine decarboxylase [Streptomyces sp. SA3_actF] Length = 552 Score = 66.4 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 2/93 (2%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAVIKTLAHLGSGL 78 L + +P +N F A D V +A KAN + A+++ LA G+GL Sbjct: 49 LVEGLGSPLNVVLPQQAVENVRRFEAARDRHHLRGTVYFAHKANRSSALVRALATSGAGL 108 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 D+ S ELR L + +RI +G + Sbjct: 109 DVASLEELRHGLGSGFTPDRIGATGPKEPEFLW 141 Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 13/81 (16%) Query: 338 ADIVGPICETGDFIALN-RKIA-LPRPGDLLYIEKTGAYGAVQSGTYN--SRLLIPEIMV 393 + G +C D I ++ LP PG+LL T Y S N R ++ + Sbjct: 428 VYLHGNLCLESDLITRRLVQLPRLPAPGELLAFANTAGYAMDFSAQ-NAERRPPARKVAL 486 Query: 394 N---GSQFHIIRPRMTFQELI 411 G + R T E Sbjct: 487 ERTPGGGW-----RWTLDEQW 502 >gi|318056831|ref|ZP_07975554.1| lysine/ornithine decarboxylase [Streptomyces sp. SA3_actG] Length = 546 Score = 66.4 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 2/93 (2%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAVIKTLAHLGSGL 78 L + +P +N F A D V +A KAN + A+++ LA G+GL Sbjct: 43 LVEGLGSPLNVVLPQQAVENVRRFEAARDRHHLRGTVYFAHKANRSSALVRALATSGAGL 102 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 D+ S ELR L + +RI +G + Sbjct: 103 DVASLEELRHGLGSGFTPDRIGATGPKEPEFLW 135 Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 13/81 (16%) Query: 338 ADIVGPICETGDFIALN-RKIA-LPRPGDLLYIEKTGAYGAVQSGTYN--SRLLIPEIMV 393 + G +C D I ++ LP PG+LL T Y S N R ++ + Sbjct: 422 VYLHGNLCLESDLITRRLVQLPRLPAPGELLAFANTAGYAMDFSAQ-NAERRPPARKVAL 480 Query: 394 N---GSQFHIIRPRMTFQELI 411 G + R T E Sbjct: 481 ERTPGGGW-----RWTLDEQW 496 >gi|307640135|gb|ADN83825.1| diaminopimelate decarboxylase-like protein [Brachionus manjavacas] Length = 134 Score = 66.4 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 25/74 (33%) Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAV 377 + + + D + + I GP C+ D + I + + + GAY Sbjct: 2 HSRCYPILLKDDLEDAVCYKSSIWGPTCDGLDLVCKEIFIPELDTNECMVFKDMGAYTIS 61 Query: 378 QSGTYNSRLLIPEI 391 + +N L I Sbjct: 62 GAVAFNGIPLPKSI 75 >gi|307640133|gb|ADN83824.1| diaminopimelate decarboxylase-like protein [Brachionus manjavacas] Length = 134 Score = 66.4 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 22/60 (36%) Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 D + + I GP C+ D + I + + + GAY + +N L I Sbjct: 16 DAVCYKSSIWGPTCDGLDLVCKEIFIPELDTNECMVFKDMGAYTISGAVAFNGIPLPKSI 75 >gi|302523310|ref|ZP_07275652.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. SPB78] gi|302432205|gb|EFL04021.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. SPB78] Length = 507 Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 2/93 (2%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAVIKTLAHLGSGL 78 L + +P +N F A D V +A KAN + A+++ LA G+GL Sbjct: 4 LVEGLGSPLNVVLPQQAVENVRRFEAARDRHHLRGTVYFAHKANRSSALVRALATSGAGL 63 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 D+ S ELR L +RI +G + Sbjct: 64 DVASLEELRHGLGNGFTPDRIGATGPKEPEFLW 96 Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 13/81 (16%) Query: 338 ADIVGPICETGDFIALN-RKIA-LPRPGDLLYIEKTGAYGAVQSGTYN--SRLLIPEIMV 393 + G +C D I ++ LP PG+LL T Y S N R ++ + Sbjct: 383 VYLHGNLCLESDLITRRLVQLPRLPAPGELLAFANTAGYAMDFSAQ-NAERRPPARKVAL 441 Query: 394 N---GSQFHIIRPRMTFQELI 411 G + R T E Sbjct: 442 ERTPGGGW-----RWTLDEQW 457 >gi|307640137|gb|ADN83826.1| diaminopimelate decarboxylase-like protein [Brachionus plicatilis] gi|307640139|gb|ADN83827.1| diaminopimelate decarboxylase-like protein [Brachionus plicatilis] Length = 142 Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 1/79 (1%) Query: 314 PTLYDAYHEINYIVNPAGDRLHI-HADIVGPICETGDFIALNRKIALPRPGDLLYIEKTG 372 YD ++ D + I GP C+ D + + + + + G Sbjct: 5 CLFYDHSECFPILLKDNVDNDVFFKSSIWGPTCDGLDLVCKEIYVPELETNEFMVFKDMG 64 Query: 373 AYGAVQSGTYNSRLLIPEI 391 AY + +N L I Sbjct: 65 AYTISGAVAFNGIPLPKSI 83 >gi|169245558|gb|ACA50825.1| LysA [Agrobacterium tumefaciens] gi|169245566|gb|ACA50829.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 4/114 (3%) Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT---- 315 +H + II+EPGRFL GI V +V S+K S TFV+ D M+ + + Sbjct: 42 MHAHPLIANAHIIVEPGRFLAGPGGIYVAEVNSVKTSRGTTFVVTDGGMHHHLAASGNLG 101 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + A IVGP+C D +A N + + GDLL I Sbjct: 102 QIVKRNYPIVAPAMMQADNEETATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|167764115|ref|ZP_02436242.1| hypothetical protein BACSTE_02498 [Bacteroides stercoris ATCC 43183] gi|167698231|gb|EDS14810.1| hypothetical protein BACSTE_02498 [Bacteroides stercoris ATCC 43183] Length = 630 Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 115/319 (36%), Gaps = 39/319 (12%) Query: 7 FEGSLHAENVSLEKLAHVVQ----T-PFYCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 +G V L+ L +Q T P ++ F A + Sbjct: 37 KDGV----GVDLKDLVDELQLRDVTAPMLVRFPDILDNRIEKISCCFRQAAEEYGYKAEN 92 Query: 55 -VCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 + Y +K N + V++ + G GL+ S+ EL +A + ++ ++ K Sbjct: 93 FIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAINMDSDSLIICNGYKDES 152 Query: 110 EIDLA----LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 I+LA VE +ELK + + A L K I R+ + + + S G Sbjct: 153 YIELALLAQKMGKRIFLVVEKMNELKLIAKMAKQLNVKPNIGIRIKLASSGSGKWEDSGG 212 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + +L AS + + HIGSQ+ +I A + QL Sbjct: 213 DASKFGLSSSELLEALDFMASKGMQDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLH 272 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKI 271 + G N++ +D+GGGLG+ Y S I +Y + I Sbjct: 273 NMGFNVEFVDIGGGLGVDYDGTRSSNSEGSVNYSIQEYVNDSISTLVDASDKNGIPHPNI 332 Query: 272 ILEPGRFLVADVGILVTKV 290 I E GR L A +L+ +V Sbjct: 333 ITESGRALTAHHSVLIFEV 351 >gi|268560856|ref|XP_002646307.1| Hypothetical protein CBG12014 [Caenorhabditis briggsae] gi|187029851|emb|CAP31061.1| hypothetical protein CBG_12014 [Caenorhabditis briggsae AF16] Length = 476 Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 59/373 (15%), Positives = 108/373 (28%), Gaps = 40/373 (10%) Query: 22 AHVVQT--PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL-AHLGSGL 78 A + PF+ AIE+ + + Y++ N++ + + L +L Sbjct: 48 AARCGSHQPFFVMDVAAIERRLEVLRSTLPLIRPN--YSIACNADPVLARVLSNNLDVNF 105 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 ++ + GEL RI+F T I A+Q+G F VE+E ++ + + Sbjct: 106 EVATSGELE-LTCLHSEPSRIIFCSQLLTRKGIKNAVQAGCGTFVVENEKQMNDVMNASA 164 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + E FG I ++ + A L Sbjct: 165 DAQMFLAVCLPYSSG--------------EVPFGCSIDELVEILDMAHLLGANLTGIYLE 210 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + +++HI +G + +S + Sbjct: 211 LGVRATLDDYITAIHDARSI--IDTASTKFLDLRHISLGNLVIPTGTDGSVNNNSISFCE 268 Query: 259 LIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSA-------------DKTFV 302 I++ + GRFLV + L T VI + + Sbjct: 269 TINRAVSELFDDHIDFSANIGRFLVTNAFTLCTNVIGKRALNAKYITNDDFDDGVGYLYQ 328 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA--DIVGPICETGDFIALNRKIALP 360 D F + D + ++GPI + D + Sbjct: 329 TNDGIYGSFGCKLMDINPQCKPLNGEETFDGSNQLYLGAVLGPILDGCDVAQRLTRCRQL 388 Query: 361 RPGDLLYIEKTGA 373 R G+ L EK GA Sbjct: 389 RVGEWLVWEKMGA 401 >gi|157266135|gb|ABV26057.1| ODC [Paracoccidioides brasiliensis] gi|157266137|gb|ABV26058.1| ODC [Paracoccidioides brasiliensis] gi|157266139|gb|ABV26059.1| ODC [Paracoccidioides brasiliensis] gi|157266141|gb|ABV26060.1| ODC [Paracoccidioides brasiliensis] gi|157266143|gb|ABV26061.1| ODC [Paracoccidioides brasiliensis] gi|157266145|gb|ABV26062.1| ODC [Paracoccidioides brasiliensis] gi|157266149|gb|ABV26064.1| ODC [Paracoccidioides brasiliensis] gi|157266151|gb|ABV26065.1| ODC [Paracoccidioides brasiliensis] gi|157266153|gb|ABV26066.1| ODC [Paracoccidioides brasiliensis] gi|157266155|gb|ABV26067.1| ODC [Paracoccidioides brasiliensis] gi|157266157|gb|ABV26068.1| ODC [Paracoccidioides brasiliensis] gi|157266159|gb|ABV26069.1| ODC [Paracoccidioides brasiliensis] gi|157266161|gb|ABV26070.1| ODC [Paracoccidioides brasiliensis] gi|157266163|gb|ABV26071.1| ODC [Paracoccidioides brasiliensis] gi|157266165|gb|ABV26072.1| ODC [Paracoccidioides brasiliensis] gi|157266167|gb|ABV26073.1| ODC [Paracoccidioides brasiliensis] gi|157266169|gb|ABV26074.1| ODC [Paracoccidioides brasiliensis] gi|157266171|gb|ABV26075.1| ODC [Paracoccidioides brasiliensis] gi|157266173|gb|ABV26076.1| ODC [Paracoccidioides brasiliensis] gi|157266175|gb|ABV26077.1| ODC [Paracoccidioides brasiliensis] Length = 88 Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 333 RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 I I GP C+ D I + G+ LY E GAY + +N Sbjct: 10 CAPIEYSIWGPTCDGIDLICERIALPGALDVGNWLYFENMGAYTKCSATRFNGF 63 >gi|157110980|ref|XP_001651339.1| hypothetical protein AaeL_AAEL005694 [Aedes aegypti] gi|108878586|gb|EAT42811.1| conserved hypothetical protein [Aedes aegypti] Length = 417 Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 61/387 (15%), Positives = 115/387 (29%), Gaps = 41/387 (10%) Query: 1 MSAFKYFEGSLHA--ENVSLEKLAHV---VQ---TPFYCYSTTAIEKNYLTFSNAFDGMD 52 M + L ++++ ++L P + + K + + Sbjct: 1 MDLLTVLKCRLEIIDDSITTKQLIDELVSFGPLEAPVHLTELDNVVKRHYQWVRHLSA-- 58 Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 Y ++ N++ ++ T L G S+ E+ + L V E I+ + D + Sbjct: 59 VHPFYTVRTNNDLRILGTTVLLDCGYVCSSKIEVMQVLELGVDPEWILLKSAADSDDLLK 118 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 A + + +E + N V + I F D +A +I T Sbjct: 119 FAQR---KRLLLSFSTERELRNIHHVYSEAELLICFGYELDPDAEHQSQIETHDL----- 170 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + + G S + H A + R++T G N Sbjct: 171 ----------LNLAKELEMDVIGWSYEPSSVHLDHTTLHDAIRKGREITDFAMIVGFNFN 220 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS 292 I++G GL I D ++ SL + I+ E G F A V + Sbjct: 221 FINIGNGLSIHKDHDISQYAAQVNRSLQDFFPDRGNFTIVAESGPFHCA------AAVTA 274 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC------E 346 I K + R + Y + + D G +C Sbjct: 275 ISTINGKRVFWHPEFPSQIERVSYYLNHDFGDESSRFEPIIWKSPKD-CGTVCRSSLYAS 333 Query: 347 TGDFIALNRKIALPRPGDLLYIEKTGA 373 + + + N + D + E GA Sbjct: 334 SNECLIDNLALPEVNEMDCMVFENQGA 360 >gi|302205761|gb|ADL10103.1| Putative ornithine decarboxylase [Corynebacterium pseudotuberculosis C231] gi|308275995|gb|ADO25894.1| Putative ornithine decarboxylase [Corynebacterium pseudotuberculosis I19] Length = 452 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 59/413 (14%), Positives = 113/413 (27%), Gaps = 44/413 (10%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAVIKTLAHL- 74 LE +AH + PF+ + + + + K+N + LA L Sbjct: 24 LESIAHAARGPFHVLYPQNFTDTARLWLDTAADTGITFGLRFGKKSNKAGCFARNLADLY 83 Query: 75 ----GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 +G+D+ S ELR AL A +P E++V +G T + I LA G E Sbjct: 84 AQGNNAGIDVASTDELRAALCAGLPGEQLVVTGPTPTAELIRLASYHGSLITISRPEDID 143 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI--PIHQIHSLYAYASTL 188 K+ +T +S + A Sbjct: 144 VIAGTIYNIKPTKSLRILLRLSSDGVHTRFGMSLEQSYAVAQTLESGRYQDLPLDIAGVS 203 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ----LRSNGHNIQHIDVGGGLGIAY 244 +D I ++ K + ++ + + + Sbjct: 204 FHCNGYDLDERIRMAHKATDAVLKLREWSSASIVSIGGGFPTSSISPELWNAVTEQLTPS 263 Query: 245 HSDHRPPSSSDYASLIHQYF-------------------GNLQCKIILEPGRFLVADVGI 285 Y + + I+ EPGR L G Sbjct: 264 MFVTGRVPGDQYPFAANCAGAEALRYILTQGTTSLKDKAISHGITILAEPGRSLCQAAGA 323 Query: 286 LVTKVISIKKSADKTFVIL-----DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI 340 V+S + + + +++++ + Y + + + Sbjct: 324 SYFPVLSCHELPNTEGNVTVVEGTSLSLSEQWFDSEYYPDPYLIRAGKILSQGNPTDSAV 383 Query: 341 VGPICETGDFIALN--RKIALPRPGDLLYIEKTGAYGAVQSGT---YNSRLLI 388 G C D+++ R P+PGD+L T Y ++ + Sbjct: 384 AGSTCLDSDYLSRRFIRFPDRPQPGDILVYPDTAGYQ--MDSNESSFHGKEPP 434 >gi|300858040|ref|YP_003783023.1| ornithine decarboxylase [Corynebacterium pseudotuberculosis FRC41] gi|300685494|gb|ADK28416.1| ornithine decarboxylase [Corynebacterium pseudotuberculosis FRC41] gi|302330319|gb|ADL20513.1| Putative ornithine decarboxylase [Corynebacterium pseudotuberculosis 1002] Length = 452 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 59/413 (14%), Positives = 113/413 (27%), Gaps = 44/413 (10%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAVIKTLAHL- 74 LE +AH + PF+ + + + + K+N + LA L Sbjct: 24 LESIAHAARGPFHVLYPQNFTDTARLWLDTAADTGITFGLRFGKKSNKAGCFARNLADLY 83 Query: 75 ----GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 +G+D+ S ELR AL A +P E++V +G T + I LA G E Sbjct: 84 AQGNNAGIDVASTDELRAALCAGLPGEQLVVTGPTPTAELIRLASYHGSLITISRPEDID 143 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI--PIHQIHSLYAYASTL 188 K+ +T +S + A Sbjct: 144 VIAGTIYNIKPTKSLRILLRLSSDGVHTRFGMSLEQSYAVAQTLESGRYQDLPLDIAGVS 203 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ----LRSNGHNIQHIDVGGGLGIAY 244 +D I ++ K + ++ + + + Sbjct: 204 FHCNGYDLDERIRMAHKATDAVLKLREWSSASIVSIGGGFPTSSISPELWNAVTEQLTPS 263 Query: 245 HSDHRPPSSSDYASLIHQYF-------------------GNLQCKIILEPGRFLVADVGI 285 Y + + I+ EPGR L G Sbjct: 264 MFVTGRVPGDQYPFAANCAGAEALRYILTQGTTSLKDKAISHGITILAEPGRSLCQAAGA 323 Query: 286 LVTKVISIKKSADKTFVIL-----DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI 340 V+S + + + +++++ + Y + + + Sbjct: 324 SYFPVLSCHELPNTEGNVTVVEGTSLSLSEQWFDSEYYPDPYLIRAGKILSQGNPTDSAV 383 Query: 341 VGPICETGDFIALN--RKIALPRPGDLLYIEKTGAYGAVQSGT---YNSRLLI 388 G C D+++ R P+PGD+L T Y ++ + Sbjct: 384 AGSTCLDSDYLSRRFIRFPDRPQPGDILVYPDTAGYQ--MDSNESSFHGKEPP 434 >gi|169245556|gb|ACA50824.1| LysA [Agrobacterium tumefaciens] gi|169245560|gb|ACA50826.1| LysA [Agrobacterium tumefaciens] gi|169245580|gb|ACA50836.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 4/114 (3%) Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT---- 315 +H + II+EPGRFL GI V +V S+K S TFV+ D M+ + + Sbjct: 42 MHAHPLIANAHIIVEPGRFLAGPGGIYVAEVNSVKTSRGTTFVVTDGGMHHHLAASGNLG 101 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + A IVGP+C D +A N + + GDLL I Sbjct: 102 QIVKRNYPIVAPAMMQADYEETATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|169245568|gb|ACA50830.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 4/104 (3%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT----LYDAYHEINY 325 II+EPGRFL GI V +V S+K S TFV++D M+ + + + Sbjct: 52 HIIVEPGRFLAGPAGIYVAEVNSVKNSRGTTFVVMDGGMHHHLAASGNLGQIVKRNYPIV 111 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 A IVGP+C D +A N + + GDLL I Sbjct: 112 APAMMQADYEETATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|68070711|ref|XP_677267.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium berghei strain ANKA] gi|56497314|emb|CAH99787.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase, putative [Plasmodium berghei] Length = 1142 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 88/244 (36%), Gaps = 20/244 (8%) Query: 1 MSAFKYFEGSLHAENVSLEK-LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M+ Y + K L + T C + I Y+ F YA+ Sbjct: 717 MNY--YRNNKAEI--CTFNKMLNENIDTSVICINLQKILLQYIRFKRNLPR--VTPFYAV 770 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQS 117 K+N ++ V+K L L D S GE+ + + +RI+++ K+ + A + Sbjct: 771 KSNDDEVVLKFLYGLNCSFDCASIGEINKLITLLPNISTDRIIYANTIKSPASLKYAKEK 830 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 I ++ ELK + + + I K+G ++ Sbjct: 831 NINLCTFDNIDELKKICKYHPTCSLLLRINIDFKN----------YKSYMSSKYGANEYE 880 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + + I GV H+GS I F +A KL R++ G+ + +++G Sbjct: 881 WEKILKF-GKENNMNIIGVSFHVGSNTKNIFDFCQAIKLSREVFNISHRLGYKFEILNMG 939 Query: 238 GGLG 241 GG Sbjct: 940 GGYP 943 >gi|289805606|ref|ZP_06536235.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 198 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 2/186 (1%) Query: 39 KNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAE 97 +N AF +T +A K S V+K + G + S+ E+R+ L + Sbjct: 2 RNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGD 61 Query: 98 RIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINAN 157 +IVF+GV K +++ A+ + +Y NV+S EL+ ++ + L K A + RV P++ + Sbjct: 62 QIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSA 121 Query: 158 THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 TH ++ T G+ + Q +P V + G+ MH+G Q+ + E F KA K+L Sbjct: 122 THAELVTAFHAKS-GLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVL 180 Query: 218 RDLTQQ 223 D +++ Sbjct: 181 VDESRR 186 >gi|169245574|gb|ACA50833.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 4/104 (3%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT----LYDAYHEINY 325 II+EPGRFL GI V +V S+K S TFV++D M+ + + + Sbjct: 52 HIIVEPGRFLAGPAGIYVAEVNSVKNSRGTTFVLMDGGMHHHLAASGNLGQIVKRNYPIV 111 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 A IVGP+C D +A N + + GDLL I Sbjct: 112 APAMMQADYEETATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|300934298|ref|ZP_07149554.1| decarboxylase [Corynebacterium resistens DSM 45100] Length = 1045 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 2/86 (2%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNA--FDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L +P + + +N A +G+D V YA KAN + + G Sbjct: 542 TDLIETYDSPVNVLAPHVLSRNAEDLVRAGQANGVDVRVFYARKANKGLSFVDAALAAGH 601 Query: 77 GLDIVSEGELRRALAAPVPAERIVFS 102 G+D+ SE EL++ L+ ++++ S Sbjct: 602 GVDVASERELQQVLSRGAQPDQVILS 627 >gi|282866453|ref|ZP_06275497.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE] gi|282558665|gb|EFB64223.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE] Length = 507 Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 5/99 (5%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQAVIKTLA--- 72 L L + +P + +N F + + V +A KAN + A+++ LA Sbjct: 27 LHSLVDALGSPLNVLLPEVVAENAARFLSVYRRHRLSGRVYFAHKANRSSALVRRLAGCD 86 Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 G+D+ S GELR LA +R++ +G Sbjct: 87 PAAVGVDVASLGELRHVLACGFTGDRVMATGPKDPQFLW 125 Score = 42.9 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%) Query: 338 ADIVGPICETGDFIALN-RKIA-LPRPGDLLYIEKTGAYGA 376 +VG +C D I + LPR GD+L T Y Sbjct: 423 VHLVGNLCLEADLITRRLVYLPRLPRAGDVLAFVNTAGYAM 463 >gi|91773808|ref|YP_566500.1| Orn/DAP/Arg decarboxylase 2 [Methanococcoides burtonii DSM 6242] gi|91712823|gb|ABE52750.1| Diaminopimelate decarboxylase [Methanococcoides burtonii DSM 6242] Length = 349 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 117/360 (32%), Gaps = 33/360 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGL-DIVSEGEL 86 P + S I + Y + D +V ++ K N V + GL + EL Sbjct: 8 PRFTLSKKIILEQYHKVKDVAD----IVAFSSKTNP--KVSPLIEAETDGLLSVHMPNEL 61 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + R++F T + I + GI F V++E +L TL K + Sbjct: 62 KHTE----DMSRVLFLAQAWTPEMIRELYEKGIRSFAVDNEFDLDTLLSTVDDTDWKITL 117 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+ + ++ FG+ I+ A ++ GV H +Q Sbjct: 118 LLRL------KLKEHSIRTERYFVFGMSSDTINKRIAQLKGNKNIEKLGVHFHRKTQNVN 171 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + I +++GGGL Y + + + + + Sbjct: 172 EWKIQPEIEDALT-----EGTLEAIDILNIGGGLPSEYANTNVDVINGIFRRISELREWL 226 Query: 267 LQCKI--ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + +I ++EPGRF+ A G LV+ + + + + + D + + Sbjct: 227 HEKEIKLMIEPGRFISAPAGKLVSHITGVYDNNIIVNASVYNSDMDAILVPV------KL 280 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYN 383 I G+ + G + D + P+ GD L GAY + Sbjct: 281 RIEGEVGNDSGEPYVVKGCTPCSMDLFRYRVYLKDEPKIGDELVFINAGAYNF--WSNFC 338 >gi|157266147|gb|ABV26063.1| ODC [Paracoccidioides brasiliensis] Length = 88 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 333 RLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 I I GP C+ D I + G+ LY E GAY + +N Sbjct: 10 CAPIEYSIWGPTCDGIDLICERIALPGALDVGNWLYFENMGAYTKCSATRFNGF 63 >gi|123366942|ref|XP_001296836.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein [Trichomonas vaginalis G3] gi|121876656|gb|EAX83906.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein [Trichomonas vaginalis G3] Length = 113 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 30/95 (31%) Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFI 351 + +++ + + F A A D + + G C++ D + Sbjct: 6 HHEDGEEQSVFMAEGIYGAFNALNYDHAEPHFLIRTEGAADGERVKTTLWGQTCDSADLV 65 Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRL 386 GD L IEK GAY + +N Sbjct: 66 YEELLWPRLEVGDYLTIEKFGAYTYSPTSFFNGFP 100 >gi|329954135|ref|ZP_08295230.1| arginine 2-monooxygenase [Bacteroides clarus YIT 12056] gi|328528112|gb|EGF55092.1| arginine 2-monooxygenase [Bacteroides clarus YIT 12056] Length = 630 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 68/319 (21%), Positives = 114/319 (35%), Gaps = 39/319 (12%) Query: 7 FEGSLHAENVSLEKLAHVVQ----T-PFYCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 +G V L++L +Q T P ++ F A + Sbjct: 37 KDGV----GVDLKELVDELQLRDVTAPMLVRFPDILDNRIEKISCCFRQAAEEYGYKAEN 92 Query: 55 -VCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 + Y +K N + V++ + G GL+ S+ EL +A + ++ ++ K Sbjct: 93 FIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAINMDSDSLIICNGYKDES 152 Query: 110 EIDLA----LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 I+LA VE +ELK + + A L K I R+ + + + S G Sbjct: 153 YIELALLAQKMGKRIFLVVEKLNELKLIAKMAKQLNVKPNIGIRIKLASSGSGKWEDSGG 212 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + +L A + + HIGSQ+ +I A + QL Sbjct: 213 DASKFGLSSSELLEALDFMADKGMQDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLH 272 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKI 271 S G ++ +D+GGGLG+ Y S I +Y + I Sbjct: 273 SMGFKVEFVDIGGGLGVDYDGTRSSNSEGSVNYSIQEYVNDSISTLVDASDKNGIPHPNI 332 Query: 272 ILEPGRFLVADVGILVTKV 290 I E GR L A +L+ +V Sbjct: 333 ITESGRALTAHHSVLIFEV 351 >gi|319900413|ref|YP_004160141.1| arginine decarboxylase [Bacteroides helcogenes P 36-108] gi|319415444|gb|ADV42555.1| arginine decarboxylase [Bacteroides helcogenes P 36-108] Length = 630 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 113/340 (33%), Gaps = 35/340 (10%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L++L +Q P ++ F A + + Y +K N Sbjct: 42 VDLKELVDELQLRDVAAPMLVRFPDILDNRIEKVSCCFKQAAEEYGYKGENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + + G GL+ S+ EL + + +V K I+LA Sbjct: 102 QMRPVVEEMINHGKKFNLGLEAGSKPELHAVIGVNTDPDSLVVCNGYKDESFIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +EL + + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKLNELNLIAKMAKQLKVRPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + HIGSQI +I A + QL + G NI+ + Sbjct: 222 SELLEALDFLEKKEMKDCLKLIHFHIGSQITKIRRIKNALREASQFFVQLHNLGFNIEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQY--------------FGNLQCKIILEPGRFLV 280 D GGG+G+ Y S S I +Y G II E GR L Sbjct: 282 DTGGGMGVDYDGTRSSNSESSVNYSIQEYVNDVVSTFVDAADKHGFSHPNIITETGRSLT 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 A +LV +V+ + LY + Sbjct: 342 AHHSVLVFEVLETASLPQMDDAWEPGEEAHELVKELYAIW 381 >gi|169245576|gb|ACA50834.1| LysA [Agrobacterium tumefaciens] gi|169245578|gb|ACA50835.1| LysA [Agrobacterium tumefaciens] gi|169245582|gb|ACA50837.1| LysA [Agrobacterium tumefaciens] gi|169245584|gb|ACA50838.1| LysA [Agrobacterium tumefaciens] gi|169245586|gb|ACA50839.1| LysA [Agrobacterium tumefaciens] gi|169245588|gb|ACA50840.1| LysA [Agrobacterium tumefaciens] gi|169245590|gb|ACA50841.1| LysA [Agrobacterium tumefaciens] gi|169245592|gb|ACA50842.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 64.5 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 4/104 (3%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT----LYDAYHEINY 325 II+EPGRFL GI V +V S+K S TFV+ D M+ + + + Sbjct: 52 HIIVEPGRFLAGPGGIYVAEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIV 111 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 A IVGP+C D +A N + + GDLL I Sbjct: 112 APAMMQADYEETATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|296164216|ref|ZP_06846811.1| decarboxylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900432|gb|EFG79843.1| decarboxylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 146 Score = 64.5 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIKTLAHLG 75 L +AH V+ PF+ +N F++ D G+ V +A KAN ++ A +G Sbjct: 23 LADMAHAVEGPFHVLFAPRFAQNLKAFTDVIDSAGIQGQVFFAKKANKAGCWLRVCAQVG 82 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 +G+D S EL AL+ V IV +G K+ + LA + G Sbjct: 83 AGVDAASAPELVHALSCGVRGSDIVVTGPAKSEQLLWLAARHGC 126 >gi|169245570|gb|ACA50831.1| LysA [Agrobacterium tumefaciens] gi|169245572|gb|ACA50832.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 64.5 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 4/104 (3%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT----LYDAYHEINY 325 +I+EPGRFL G+ V +V S+K S TF++ + M+ + + + Sbjct: 52 HVIVEPGRFLAGPGGLYVAEVNSVKISRGTTFLVTNGGMHHHLAASGNLGQIVKRNYPIV 111 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 A IVGP+C D +A N + + GDLL I Sbjct: 112 APAMMQAAYEETATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|169245554|gb|ACA50823.1| LysA [Agrobacterium tumefaciens] Length = 157 Score = 64.5 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 4/113 (3%) Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT----L 316 + +I+EPGRFL G+ V +V S+K S TFV++D M+ + + Sbjct: 43 KAHPLITDAHVIVEPGRFLAGSGGVYVAEVNSVKTSRGTTFVVMDGGMHHHLAASGNLGQ 102 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 + A IVGP+C D +A N + + GDLL I Sbjct: 103 IVKRNYPIVAPAMMQADYEETATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155 >gi|70953366|ref|XP_745789.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium chabaudi chabaudi] gi|56526220|emb|CAH78210.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase, putative [Plasmodium chabaudi chabaudi] Length = 923 Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 32/106 (30%) Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 V + S + + +++ R +Y + D Sbjct: 800 VVSIHDNKYNYYSYYITDSIYGCFSGIIFDEYSRHPIYIINNNKMDSKQMILDSPLYLTK 859 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 I G C+ D I + + D + E +GAY V + +N Sbjct: 860 IYGQSCDGLDMITSSTYLPECNINDWIIYEYSGAYTFVSASGFNGF 905 Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 83/244 (34%), Gaps = 19/244 (7%) Query: 1 MSAFKYFEGSLHAENVSLEK-LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M F Y + K L + T C + + Y+ F +A+ Sbjct: 369 MMNF-YRNNKAEI--CTFNKMLNEDIDTSVVCINLQKVLLQYIRFKRNLPR--VTPFFAV 423 Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQS 117 K+N ++ VIK L L D S GE+ + +RI+++ K+ + A + Sbjct: 424 KSNDDENVIKFLYGLNCNFDCASIGEINKLTTLFPNMSRDRIIYANTIKSPSSLKYAKEK 483 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 I ++ ELK + + + I K+G + Sbjct: 484 NINLCTFDNIDELKKICKYHPTCSLLLRINIDFKN----------YKSYMSSKYGANEFE 533 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + + I GV H+GS F +A KL RD G Q +++G Sbjct: 534 WEKILKF-GKENNLNIVGVSFHVGSNTKNSFDFCQAIKLSRDAFDLGSRFGFKFQILNIG 592 Query: 238 GGLG 241 GG Sbjct: 593 GGYP 596 >gi|27379075|ref|NP_770604.1| hypothetical protein bll3964 [Bradyrhizobium japonicum USDA 110] gi|27352225|dbj|BAC49229.1| bll3964 [Bradyrhizobium japonicum USDA 110] Length = 359 Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 1/77 (1%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GL 78 K+A TP +E+N A D +K + N + K G+ G+ Sbjct: 8 KIAREYGTPCAVIDMDKVERNIARIQKACDEAGVANRPHIKTHKNPTIAKMQIAAGAKGI 67 Query: 79 DIVSEGELRRALAAPVP 95 GE A + Sbjct: 68 TCQKLGEAEIMANAGID 84 >gi|325849925|ref|ZP_08170964.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325479949|gb|EGC83032.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 51 Score = 64.1 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 23/48 (47%) Query: 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD 49 + FK +G L VS+EKLA +TP Y Y I+ +F F Sbjct: 4 NNFKNNKGLLEIGGVSVEKLAQKYKTPLYIYDQKLIKDTASSFVENFK 51 >gi|22297073|gb|AAM94460.1| ornithine decarboxylase [Phaseolus vulgaris] Length = 251 Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 92/261 (35%), Gaps = 11/261 (4%) Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+K N + + LA +GS D S E+ L+ + ERIVF+ K +I A + Sbjct: 2 AVKCNPEPSFLSMLAAMGSNFDCASRAEIEYVLSLGISPERIVFANPCKPESDIIFAEKV 61 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G+ +SE E+ + + I + + + Sbjct: 62 GVNLTTYDSEDEVYKIKKHHPKCELLLRI----------KPMNDGNARCPMGPKYGALPE 111 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + +SGV HIGS ++ A + + + G + ++ Sbjct: 112 EIEPLLRIAQASRLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETADKFGMSKMNVLDI 171 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GG + H ++ A H + + II EPGRF L T +I + Sbjct: 172 GGGFTSGHQFTTAATAVKSALQQH-FSNEPELTIIAEPGRFFAETAFTLATTIIGKRVRG 230 Query: 298 DKTFVILDVAMNDFMRPTLYD 318 D ++ + M LYD Sbjct: 231 DLREYWINDGLYGSMNCVLYD 251 >gi|169245564|gb|ACA50828.1| LysA [Agrobacterium tumefaciens str. C58] Length = 157 Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 4/104 (3%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT----LYDAYHEINY 325 +I+EPGRFL G+ V +V S+K S TFV+ D M+ + + + Sbjct: 52 HVIVEPGRFLAGPGGLYVVEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIV 111 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 A IVGP+C D +A N + GDLL I Sbjct: 112 APAMMQAAHDETATIVGPLCTPLDTLARNATLPKLNAGDLLAIL 155 >gi|218131815|ref|ZP_03460619.1| hypothetical protein BACEGG_03436 [Bacteroides eggerthii DSM 20697] gi|317474568|ref|ZP_07933842.1| arginine decarboxylase [Bacteroides eggerthii 1_2_48FAA] gi|217986118|gb|EEC52457.1| hypothetical protein BACEGG_03436 [Bacteroides eggerthii DSM 20697] gi|316909249|gb|EFV30929.1| arginine decarboxylase [Bacteroides eggerthii 1_2_48FAA] Length = 630 Score = 63.7 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 67/319 (21%), Positives = 113/319 (35%), Gaps = 39/319 (12%) Query: 7 FEGSLHAENVSLEKLAHVVQ-----TPFYCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 +G V L++L +Q P ++ F A + Sbjct: 37 KDGV----GVDLKELVDELQLRDVMAPMLVRFPDILDNRIEKISCCFRQAAEEYGYKAEN 92 Query: 55 -VCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 + Y +K N + V++ + G GL+ S+ EL +A + ++ ++ K Sbjct: 93 FIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAINMNSDSLIICNGYKDES 152 Query: 110 EIDLA----LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 I+LA VE +ELK + + A L K I R+ + + + S G Sbjct: 153 YIELALLAQKMGKRIFLVVEKLNELKLIAKMAKQLNVKPNIGIRIKLASSGSGKWEDSGG 212 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + +L A + + HIGSQ+ +I A + QL Sbjct: 213 DASKFGLSSSELLEALDFMADKGMQDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLH 272 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKI 271 S G ++ +D+GGGLG+ Y S I +Y + I Sbjct: 273 SMGFKVEFVDIGGGLGVDYDGTRSSNSEGSVNYSIQEYVNDSISTLVDASDKNGIPHPNI 332 Query: 272 ILEPGRFLVADVGILVTKV 290 I E GR L A +L+ +V Sbjct: 333 ITESGRALTAHHSVLIFEV 351 >gi|260911532|ref|ZP_05918118.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 472 str. F0295] gi|260634322|gb|EEX52426.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 472 str. F0295] Length = 201 Score = 63.3 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 63/192 (32%), Gaps = 10/192 (5%) Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGR 277 + + ++ I+ GGG + + S +Y ++ILEPG Sbjct: 1 MHIESKFSGWFPALKWINFGGGHLMTRKDYDVELLINTLRSFKERYPHL---QVILEPGS 57 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNP------AG 331 G LV +++ + + IL+V+ M L Y Sbjct: 58 AFAWQTGPLVAQIVDVVEDKGIQTAILNVSFTCHMPDCLEMPYQPAVRNARSLELEAAVN 117 Query: 332 DRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 + G C +GDF+ L + G+ + E Y V++ +N Sbjct: 118 GASKNIYRLGGNSCLSGDFMGLWQFDHALTIGENVIFEDMIHYTTVKTNMFNGITHPSLA 177 Query: 392 MVN-GSQFHIIR 402 +V + ++R Sbjct: 178 IVRTSGELEMLR 189 >gi|298208847|ref|YP_003717026.1| probable diaminopimelate decarboxylase [Croceibacter atlanticus HTCC2559] gi|83848774|gb|EAP86643.1| probable diaminopimelate decarboxylase [Croceibacter atlanticus HTCC2559] Length = 470 Score = 63.3 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 100/247 (40%), Gaps = 14/247 (5%) Query: 13 AENVSLEK-LAHVVQTPFYCYSTTAIEKNYLTFSNAFD--GMDTMVCYALKANSNQAVIK 69 E+ +L+ L + +P +S + E N + + + + +A KAN + +I+ Sbjct: 20 IEDFNLQDALFNTYGSPLNIHSLPSFEDNITEYQEVLNVYNFKSQLFFARKANKFKNLIE 79 Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 + G+D S EL++ L V + +++ + K + ++LAL+ + ++++ E Sbjct: 80 AAVNSDIGVDTASYEELKQCLDLQVESSKLISTAAIKNKELLELALKHNVVII-IDNKDE 138 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ-IHSLYAYASTL 188 L + + SL A I RV+ + NT K +FG I + L Y Sbjct: 139 LIEIEKLVKSLDCVAQIGIRVSGFAHNNT-------KLFSRFGFDIEEVEPILCNYLKGN 191 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 P + G H+ A L + +S N+ ID+GGG+ + Y Sbjct: 192 PSFNLKGFHFHLD--GYSTAQRGNALHQTISLFESYKSTFPNLSFIDIGGGILMNYLKSE 249 Query: 249 RPPSSSD 255 + Sbjct: 250 TEWQTFQ 256 Score = 38.3 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 3/105 (2%) Query: 273 LEPGRFLVADVGILVTKVISIKKS-ADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 LEPGR L+ VGI + +V K + L++ M+ + N Sbjct: 332 LEPGRSLLNQVGITMARVAHRKVDARGNHLIGLEMNMSQLKSSSADFLLDPFVSYHNEDE 391 Query: 332 DRLHIHADIVGPICETGDFIALNRKI--ALPRPGDLLYIEKTGAY 374 + I A G C D I + + LP GD++ T Y Sbjct: 392 TQQPIEAYFTGAYCLEQDVILKRKVVLKQLPSIGDVVIFVNTAGY 436 >gi|302538022|ref|ZP_07290364.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. C] gi|302446917|gb|EFL18733.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. C] Length = 487 Score = 63.3 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 2/96 (2%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD--TMVCYALKANSNQAVIKTLAHLG 75 L+ L + +P I N F + G V +A KAN + A+++ L Sbjct: 26 LQSLVDGLGSPLNVLLPDQIALNLGAFRSVLRGHQLSGRVFFAHKANRSSALVRRLTTTE 85 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 +GLD S EL+ AL + ++++ +G Sbjct: 86 AGLDAASLAELQHALGSGFTGDKVMVTGPKDPEFLW 121 Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 4/112 (3%) Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 C + EPGR LV G+ + KV+ ++ S ++ + + + + + Sbjct: 332 CDLYAEPGRALVDQCGVTLGKVLEVRASGGGPAMVRLAMNSGDVGLEEHGILVDPVLLRR 391 Query: 329 PAGDRLHIHADI--VGPICETGDFIALN-RKIA-LPRPGDLLYIEKTGAYGA 376 + + G +C D I + LP+PGDLL T Y Sbjct: 392 DGAPGVGRPVGVHLAGNLCLESDLITRRTVFLPDLPQPGDLLAFPNTAGYCM 443 >gi|6502941|gb|AAF14518.1|AF139900_1 ornithine decarboxylase [Plasmodium falciparum] Length = 948 Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 1/114 (0%) Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 V ++ S S + +++ R +Y ++ N N A+ Sbjct: 820 VVNINDNRYNYFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMN-FNLYLAN 878 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + G C+ D I + D L E GAY V S +N ++ + Sbjct: 879 VFGQSCDGLDMINSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 932 Score = 59.5 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 85/223 (38%), Gaps = 15/223 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L + T C + I Y+ F Y++K+N+++ VIK L L D Sbjct: 359 LNENIDTSVVCINLQKILAQYVRFKKNLPH--VTPFYSVKSNNDEVVIKFLYGLNCNFDC 416 Query: 81 VSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 S GE+ + + +RI+F+ K+I+ + A + I ++ ELK + + Sbjct: 417 ASIGEISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHP 476 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 I K+G ++ + YA + I GV Sbjct: 477 KCSLILRINVDFKN----------YKSYMSSKYGANEYEWEEMLLYAKKH-NLNIVGVSF 525 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 H+GS + F A KL RD+ + G N I++GGG Sbjct: 526 HVGSNTKNLFDFCLAIKLCRDVFDMSSNMGFNFYIINLGGGYP 568 >gi|2331032|gb|AAB66828.1| ornithine decarboxylase [Plasmodium falciparum] Length = 947 Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 1/114 (0%) Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 V ++ S S + +++ R +Y ++ N N A+ Sbjct: 819 VVNINDNRYNYFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMN-FNLYLAN 877 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + G C+ D I + D L E GAY V S +N ++ + Sbjct: 878 VFGQSCDGLDMINSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 931 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 83/220 (37%), Gaps = 15/220 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L + T C + I Y+ F Y++K+N+++ VIK L L D Sbjct: 359 LNENIDTSVVCINLQKILAQYVRFKKNLPH--VTPFYSVKSNNDEVVIKFLYGLNCNFDC 416 Query: 81 VSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 S GE+ + + +RI+F+ K+I+ + A + I ++ ELK + + Sbjct: 417 ASIGEISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHP 476 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 I K+G ++ + YA + I GV Sbjct: 477 KCSLILRINVDFKN----------YKSYMSSKYGANEYEWEEMLLYAKKH-NLNIVGVSF 525 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 H+GS + F A KL RD+ + N I++GG Sbjct: 526 HVGSNTKNLFDFCLAIKLCRDVFDMSSNMVFNFYIINLGG 565 >gi|51236712|gb|AAT99013.1| ornithine decarboxylase [Glomerella lindemuthiana] Length = 278 Score = 62.9 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 101/290 (34%), Gaps = 34/290 (11%) Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S+ E+ + L+ ERI+++ KT + G+ ++ EL+ + + Sbjct: 1 GFDCASKTEIDQVLSMGTSPERIIYAQPCKTNSYVRYVKAMGVKQMTFDNADELRKVARL 60 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I T + S + KFG + L A A L + + GV Sbjct: 61 FPDAELFLRIM----------TDDESSLCRLSMKFGAAKDATNELLATAKDLG-LNVVGV 109 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GS +F+KA ++ +Q R+ G ++ +D+GGG D Sbjct: 110 SFHVGSGASDPMAFYKAVYDAHEVFEQGRAYGFQMKTLDIGGGFCGDTFEDMAAVLRGAL 169 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-------KTFVILDVAMN 309 + + II EPGR+ V+ + +I+ + D V + + Sbjct: 170 ---DEYFPVSSNVNIIAEPGRYYVSAAFTIACNIIARRTVEDPAAEGEKCYMVYISGGLY 226 Query: 310 DFMRPTLYDAYHE-------------INYIVNPAGDRLHIHADIVGPICE 346 ++D H N D I I GP C+ Sbjct: 227 GNFSSIMFDHQHPVAKVLRAGPATLYDCPSANACPDGEGIRYSIWGPTCD 276 >gi|150003904|ref|YP_001298648.1| arginine decarboxylase [Bacteroides vulgatus ATCC 8482] gi|212692729|ref|ZP_03300857.1| hypothetical protein BACDOR_02227 [Bacteroides dorei DSM 17855] gi|237709425|ref|ZP_04539906.1| arginine decarboxylase [Bacteroides sp. 9_1_42FAA] gi|237724971|ref|ZP_04555452.1| biosynthetic arginine decarboxylase [Bacteroides sp. D4] gi|254880856|ref|ZP_05253566.1| arginine decarboxylase [Bacteroides sp. 4_3_47FAA] gi|265754624|ref|ZP_06089676.1| arginine decarboxylase [Bacteroides sp. 3_1_33FAA] gi|294775058|ref|ZP_06740587.1| arginine 2-monooxygenase [Bacteroides vulgatus PC510] gi|319639866|ref|ZP_07994595.1| hypothetical protein HMPREF9011_00192 [Bacteroides sp. 3_1_40A] gi|166220848|sp|A6L012|SPEA_BACV8 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|149932328|gb|ABR39026.1| putative arginine decarboxylase [Bacteroides vulgatus ATCC 8482] gi|212664665|gb|EEB25237.1| hypothetical protein BACDOR_02227 [Bacteroides dorei DSM 17855] gi|229436709|gb|EEO46786.1| biosynthetic arginine decarboxylase [Bacteroides dorei 5_1_36/D4] gi|229456481|gb|EEO62202.1| arginine decarboxylase [Bacteroides sp. 9_1_42FAA] gi|254833649|gb|EET13958.1| arginine decarboxylase [Bacteroides sp. 4_3_47FAA] gi|263234738|gb|EEZ20306.1| arginine decarboxylase [Bacteroides sp. 3_1_33FAA] gi|294451102|gb|EFG19573.1| arginine 2-monooxygenase [Bacteroides vulgatus PC510] gi|317388530|gb|EFV69380.1| hypothetical protein HMPREF9011_00192 [Bacteroides sp. 3_1_40A] Length = 630 Score = 62.9 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 120/349 (34%), Gaps = 39/349 (11%) Query: 7 FEGSLHAENVSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAFD--------GMDT 53 +G V L++L +Q P ++ +N F Sbjct: 37 KDGV----EVDLKELVDELQLRDVAAPMLVRFPDILDNRIEKIANCFKQASDEYGYKAQN 92 Query: 54 MVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 + Y +K N + V++ + G GL+ S+ EL +A ++ ++ K Sbjct: 93 FIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIICNGYKDES 152 Query: 110 EIDLA----LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 I+LA VE +EL+ + + A L + I R+ + + + S G Sbjct: 153 YIELALLAQKMGKRIFLVVEKMNELRLIAKMAKQLNVRPNIGIRIKLASSGSGKWEDSGG 212 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + +L + + HIGSQ+ +I A + QL Sbjct: 213 DASKFGLTSSELLEALDFLEKKDMKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLH 272 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKI 271 G N++ +D+GGGLG+ Y S S I +Y + I Sbjct: 273 VMGFNVEFVDIGGGLGVDYDGTRSANSESSVNYSIQEYVNDSISTLVDASDKNGIPHPNI 332 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 I E GR L A +L+ +V+ + + + LY+ + Sbjct: 333 ITESGRSLTAHHSVLIFEVLETATLPEMDEDFEVGENDHELVHELYEIW 381 >gi|254481038|ref|ZP_05094284.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [marine gamma proteobacterium HTCC2148] gi|214038833|gb|EEB79494.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [marine gamma proteobacterium HTCC2148] Length = 408 Score = 62.9 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 55/385 (14%), Positives = 113/385 (29%), Gaps = 36/385 (9%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + I + + A+K+ + ++KT +G D+ + Sbjct: 42 RELSTPALVFDLDTITARMQALAQTAANQNIACLLAVKSCPREPLLKTAQQHLAGFDVSN 101 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R A + + + + T D A + V+S ++ Q+ Sbjct: 102 LAEYRALP-ADLSGKTVSLTSPQLTKDYYLFAARGNRLVVTVDSIAQCVNYLQQGAPFPY 160 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 R+ T T F P+ + P Sbjct: 161 ----VLRIQGGQLLPTSDAAYTNCSRFGFTAPMLEQLLQRPDVQAQPPCGWHVHHGS--- 213 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 +I S L+ L + I++GGG HS + + +A Sbjct: 214 ---EINSAATYQFLMAGLAKLGAQLPEPPAIINLGGGW----HSVEKQQLNDLFALARKV 266 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + C + +EPG++ G+ V +V++ D +L+++M+ +R + Sbjct: 267 F--PEPCSVFIEPGQWFGKGAGLAVGEVVNKSGDDDNLGCVLNLSMDCHLRWSS-----P 319 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDF-----------IALNRKIALPRPGDLLYIEKT 371 + + G C D +A + + L G + + Sbjct: 320 RLLVPVQLPALKFAKVYLGGASCYEADSLGCFMLPYRQDLAHDTSLGL---GCRVLLSNI 376 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGS 396 Y + +N E + Sbjct: 377 SLYSLAWNQGFNGIAPATEYWLRNG 401 >gi|169245562|gb|ACA50827.1| LysA [Agrobacterium rhizogenes] Length = 157 Score = 62.9 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF-----MRPTLYDAYHEIN 324 II+EPGRFL G+ V +V S+K S TFV+ D M+ + + I Sbjct: 52 HIIVEPGRFLAGPGGLYVAEVNSVKSSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIV 111 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 D A IVGP+C D +A N + + GDLL I Sbjct: 112 APAKMQADHD-ETATIVGPLCTPLDTLARNAALPKLKTGDLLAIL 155 >gi|118113174|ref|XP_001236802.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor, partial [Gallus gallus] Length = 111 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 27/90 (30%) Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 T+ I D F Y D + + GP C+ D I N + Sbjct: 11 FTYYINDGVYGSFASKLSEKLYTNPEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLP 70 Query: 359 LPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 GD L + G+ + T+N Sbjct: 71 ELSVGDWLIFDNMGSGTLGEQSTFNDYQRP 100 >gi|156081893|ref|XP_001608439.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium vivax SaI-1] gi|148801010|gb|EDL42415.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase, putative [Plasmodium vivax] Length = 1442 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 32/112 (28%) Query: 282 DVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + + S F + + + + + + A+I Sbjct: 1321 NDNRYNYYSYYVSDSIYGCFSGIIFDEYNRSPVFVIRNQVDGSTAGDDVASSPLYLANIF 1380 Query: 342 GPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 G C+ D I + D + E GAY V S +N ++ + Sbjct: 1381 GQSCDGLDMITSITYLPECYINDWIIYEYAGAYTFVSSSNFNGFKKCQKVYI 1432 Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 18/239 (7%) Query: 6 YFEGSLHAENVSLEKLA-HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 Y + E +L K+ + T C + I Y+ F Y++K+N++ Sbjct: 886 YRKNK--IEMFTLRKILSEDIDTSVVCINLQKILAQYIRFKKNLPS--VTPFYSVKSNND 941 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPV--PAERIVFSGVGKTIDEIDLALQSGIYCF 122 VIK L L D S GE+++ ERI+++ K+I+ + A I Sbjct: 942 DVVIKFLYGLNCNFDCASVGEVKKLTTLLPELNRERIIYANTIKSINSLIFARNEHINLC 1001 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ++ EL+ + + I K+G H+ ++ Sbjct: 1002 TFDNIEELRKILKYHPKCSLLLRINVDFKN----------YKSYMSSKYGANEHEWENIL 1051 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 ++ + I GV H+GS + + +A KL RD+ G+ + +++GGG Sbjct: 1052 SFGRKH-NLNIVGVSFHVGSNTKNLFDYCQAIKLSRDVWNISNKMGYQFEILNLGGGFP 1109 >gi|157888667|emb|CAP09405.1| antizyme inhibitor 1 [Danio rerio] Length = 230 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 60/199 (30%), Gaps = 19/199 (9%) Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++GV + + +++ A R + + G ++ +D+GGG + + S Sbjct: 7 VAGVTFQVPASCKDPQAYTHALSDARCIFDMGKELGFDMNILDIGGGFSGSEFQLKQVHS 66 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 L + II EPG F V L VI K + + Sbjct: 67 VIR-PLLEAYFPSESGVSIIAEPGNFFVFSCFTLAVNVIGKKAAYRNLHTSTHDKLTSSD 125 Query: 313 RPTLYDAYH------------------EINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 P + + ++ D + + GP C+ D + Sbjct: 126 APEFVYYMNDGVYGSFMGRLFGNIISTPSVHKMSLTLDEPVFSSSLWGPSCDPLDQVVER 185 Query: 355 RKIALPRPGDLLYIEKTGA 373 + GD L GA Sbjct: 186 CLLPELAVGDWLVFSNMGA 204 >gi|221054205|ref|XP_002261850.1| s-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium knowlesi strain H] gi|193808310|emb|CAQ39013.1| s-adenosylmethionine decarboxylase-ornithine decarboxylase, putative [Plasmodium knowlesi strain H] Length = 1393 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 28/104 (26%) Query: 282 DVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + + S F + + + + + A+I Sbjct: 1272 NDNRYNYYSYYVSDSIYGCFSGIIFDEYNRSPVFVIRNQGDNSTTSEELATSPLYLANIF 1331 Query: 342 GPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 G C+ D I + D + E GAY V S +N Sbjct: 1332 GQSCDGLDMITSITYLPECYINDWIIYEYAGAYTFVSSSNFNGF 1375 Score = 59.1 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 93/239 (38%), Gaps = 18/239 (7%) Query: 6 YFEGSLHAENVSLEKLA-HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 Y + E +L ++ + T C + I Y+ F Y++K+N++ Sbjct: 830 YRKNK--IEMFTLNRILNDDIDTSVVCINLEKILVQYIRFKKNLPS--VTPFYSVKSNND 885 Query: 65 QAVIKTLAHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCF 122 V+K L L D S GE+++ ERI+F+ K+I+ + A I Sbjct: 886 DIVLKFLYGLNCNFDCASVGEVKKLTTLLPDIARERIIFANTIKSINSLIYAKNENINLC 945 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 ++ ELK + + I K+G H+ ++ Sbjct: 946 TFDNIEELKKIRKYHPKCSLLLRINVDFKN----------YKSYMSSKYGANEHEWENIL 995 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 A+ + I GV H+GS + + +A KL RD+ + G+N + +++GGG Sbjct: 996 AFGKEH-NLNIIGVSFHVGSNTKNLFDYCQAIKLSRDVFNISKKMGYNFEILNLGGGYP 1053 >gi|170290124|ref|YP_001736940.1| Orn/DAP/Arg decarboxylase 2 [Candidatus Korarchaeum cryptofilum OPF8] gi|170174204|gb|ACB07257.1| Orn/DAP/Arg decarboxylase 2 [Candidatus Korarchaeum cryptofilum OPF8] Length = 344 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 60/368 (16%), Positives = 126/368 (34%), Gaps = 35/368 (9%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRA 89 + S + Y + D + Y+ K N + + + L S + + S + R Sbjct: 4 FILSRRVALRQYSIARSYCDA----LAYSYKTNPH--IWEVLKETDSMVGVSSIASMERV 57 Query: 90 LAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 ER V+ G+ DEI L G+ F V++E EL + G+K + R Sbjct: 58 E-----GERAVYYLQGEREDEISYLLDRGVRWFIVDNEPELGKFIKVVERRGEKVNLFIR 112 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 + + K +GI ++ + + ++ + + Sbjct: 113 IKM------REHTIYTGKHFVYGIDWRKVPRIMEEIRSDLIDQLGIHFHRKTQNVGEWSL 166 Query: 210 FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS-DYASLIHQYFGNLQ 268 + L D ++ I I++GGG+ + Y + + + ++ + Sbjct: 167 KEDVSEALADSLER-------IDWINIGGGIPVKYANSKPEVEAVLREIGELKEFLNSRG 219 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 K+++EPGRF+ A L +V+++ + ++ Y + + Sbjct: 220 IKLMMEPGRFIAAPSVALEAEVLNVYEGN-----VILDCSIFNAYMDTYLLNIRLPVLGE 274 Query: 329 PAGDRLHIHADIVGPICETGDFIALNRKI-ALPRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 G + G ++ D + + +PGD + GAY +N Sbjct: 275 LEGGGFR--YLLKGRSPDSLDIFRYSVYLDRELKPGDKVIFLNAGAYNF--HTEFNDMPK 330 Query: 388 IPEIMVNG 395 I +V+ Sbjct: 331 IRVEIVDD 338 >gi|310820757|ref|YP_003953115.1| arginine decarboxylase [Stigmatella aurantiaca DW4/3-1] gi|309393829|gb|ADO71288.1| Arginine decarboxylase [Stigmatella aurantiaca DW4/3-1] Length = 669 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 62/309 (20%), Positives = 109/309 (35%), Gaps = 34/309 (11%) Query: 16 VSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 + L++L V P T + + + AF Y +K N Sbjct: 49 MDLKELVDEVRRRGIGLPLLIRFTDVLRHRVIHLNEAFKKAITESNYKGQYRGVYPIKVN 108 Query: 63 SNQAVIKTLAH----LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS- 117 ++ V++T+ G GL+ S+ EL +A + +V K + ++ AL Sbjct: 109 QHRYVVETIVETGKNYGYGLEAGSKPELLAVMALLDNEDALVICNGYKDEEYVETALFFS 168 Query: 118 ---GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE SEL + + A G + RV + S G + Sbjct: 169 RLGRNVILVVEKPSELPLIAEVARKTGIAPRLGVRVKLSTRGAGKWEASGGDRSKFGLTS 228 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 ++ + T + H+GSQI I + A + + ++ G ++++ Sbjct: 229 SELMNCISFMRETGLLPHFELLHFHLGSQISNIRNVKNALREVGCFYVEVARQGAPLKYL 288 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVA 281 DVGGGLG+ Y ++ +YA G ++ E GR +VA Sbjct: 289 DVGGGLGVDYDGSQTNFTSSMNYTTEEYANDVVFGVMEACDRAGVTHPTLVSESGRAIVA 348 Query: 282 DVGILVTKV 290 +LV V Sbjct: 349 HHAVLVMDV 357 >gi|115379802|ref|ZP_01466872.1| arginine decarboxylase [Stigmatella aurantiaca DW4/3-1] gi|115363194|gb|EAU62359.1| arginine decarboxylase [Stigmatella aurantiaca DW4/3-1] Length = 621 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 62/309 (20%), Positives = 109/309 (35%), Gaps = 34/309 (11%) Query: 16 VSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 + L++L V P T + + + AF Y +K N Sbjct: 1 MDLKELVDEVRRRGIGLPLLIRFTDVLRHRVIHLNEAFKKAITESNYKGQYRGVYPIKVN 60 Query: 63 SNQAVIKTLAH----LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS- 117 ++ V++T+ G GL+ S+ EL +A + +V K + ++ AL Sbjct: 61 QHRYVVETIVETGKNYGYGLEAGSKPELLAVMALLDNEDALVICNGYKDEEYVETALFFS 120 Query: 118 ---GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE SEL + + A G + RV + S G + Sbjct: 121 RLGRNVILVVEKPSELPLIAEVARKTGIAPRLGVRVKLSTRGAGKWEASGGDRSKFGLTS 180 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 ++ + T + H+GSQI I + A + + ++ G ++++ Sbjct: 181 SELMNCISFMRETGLLPHFELLHFHLGSQISNIRNVKNALREVGCFYVEVARQGAPLKYL 240 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVA 281 DVGGGLG+ Y ++ +YA G ++ E GR +VA Sbjct: 241 DVGGGLGVDYDGSQTNFTSSMNYTTEEYANDVVFGVMEACDRAGVTHPTLVSESGRAIVA 300 Query: 282 DVGILVTKV 290 +LV V Sbjct: 301 HHAVLVMDV 309 >gi|218263072|ref|ZP_03477317.1| hypothetical protein PRABACTJOHN_02998 [Parabacteroides johnsonii DSM 18315] gi|218223005|gb|EEC95655.1| hypothetical protein PRABACTJOHN_02998 [Parabacteroides johnsonii DSM 18315] Length = 630 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 119/349 (34%), Gaps = 39/349 (11%) Query: 7 FEGSLHAENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFD--------GMDT 53 +G V L +L V+ P ++ +N F Sbjct: 37 KDGV----GVDLRELVDELQLRDVEAPVLIRFPDILDNRIEKIANCFKQASDEYGYKAQN 92 Query: 54 MVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 + Y +K N + V++ + G GL+ S+ EL +A ++ ++ K Sbjct: 93 FIIYPIKVNQMRPVVEEIIGHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIICNGYKDES 152 Query: 110 EIDLA----LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 I+LA VE +EL + + A L + I R+ + + + S G Sbjct: 153 YIELALLAQKMGKRIFLVVEKINELTLIAKMAKQLNVRPNIGIRIKLASSGSGKWEESGG 212 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + +L + + HIGSQ+ +I A + QL Sbjct: 213 DASKFGLTSSELLEALDFLEKKDLTDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLH 272 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKI 271 + G NI+ +D+GGGLG+ Y S S I +Y + I Sbjct: 273 AMGFNIEFVDIGGGLGVDYDGTRSSNSESSVNYSIQEYVNDSISTMVDVSDKNGIPHPNI 332 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 I E GR L A +L+ +V+ + + + LY+ + Sbjct: 333 ITESGRSLTAHHSVLIFEVLETATLPEMDEDFEVSESDHELVHELYEIW 381 >gi|22297071|gb|AAM94459.1| ornithine decarboxylase [Daucus carota] Length = 251 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 91/261 (34%), Gaps = 11/261 (4%) Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+K N + + LA +GS D S E+ L+ + RIVF+ K +I A + Sbjct: 2 AVKCNPEPSFLSMLAAMGSNFDCASRAEIEYVLSLGISPGRIVFANPCKPESDIIFAEKV 61 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G+ +SE E+ + + I + + + Sbjct: 62 GVNLTTYDSEDEVYKIKKHHPKCELLLRI----------KPMNDGNARCPMGPKYGALPE 111 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + +SGV HIGS ++ A + + + G + ++ Sbjct: 112 EVEPLLRIAQASRLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETADKFGMSKMNVLDI 171 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GG + H ++ A H + + II EPGRF L T +I + Sbjct: 172 GGGFTSGHQFTTAATAVRSALQQH-FSNEPELTIIAEPGRFFAETAFTLATTIIGKRVRG 230 Query: 298 DKTFVILDVAMNDFMRPTLYD 318 D ++ + M LYD Sbjct: 231 DLREYWINDGLYGSMNCVLYD 251 >gi|5070268|gb|AAD39097.1|AF112367_1 S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium falciparum] Length = 1419 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 1/114 (0%) Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 V ++ S S + +++ R +Y ++ N N A+ Sbjct: 1291 VVNINDNRYNYFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMN-FNLYLAN 1349 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + G C+ D I + D L E GAY V S +N ++ + Sbjct: 1350 VFGQSCDGLDMINSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 1403 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 85/223 (38%), Gaps = 15/223 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L + T C + I Y+ F Y++K+N+++ VIK L L D Sbjct: 831 LNENIDTSVVCINLQKILAQYVRFKKNLPH--VTPFYSVKSNNDEVVIKFLYGLNCNFDC 888 Query: 81 VSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 S GE+ + + +RI+F+ K+I+ + A + I ++ ELK + + Sbjct: 889 ASIGEISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHP 948 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 I K+G ++ + YA + I GV Sbjct: 949 KCSLILRINVDFKN----------YKSYMSSKYGANEYEWEEMLLYAKKH-NLNIVGVSF 997 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 H+GS + F A KL RD+ + G N I++GGG Sbjct: 998 HVGSNTKNLFDFCLAIKLCRDVFDMSSNMGFNFYIINLGGGYP 1040 >gi|6002637|gb|AAF00073.1|AF094833_1 S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium falciparum] Length = 1419 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 1/114 (0%) Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 V ++ S S + +++ R +Y ++ N N A+ Sbjct: 1291 VVNINDNRYNYFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMN-FNLYLAN 1349 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + G C+ D I + D L E GAY V S +N ++ + Sbjct: 1350 VFGQSCDGLDMINSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 1403 Score = 58.3 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 85/223 (38%), Gaps = 15/223 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L + T C + I Y+ F Y++K+N+++ VIK L L D Sbjct: 831 LNENIDTSVVCINLQKILAQYVRFKKNLPH--VTPFYSVKSNNDEVVIKFLYGLNCNFDC 888 Query: 81 VSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 S GE+ + + +RI+F+ K+I+ + A + I ++ ELK + + Sbjct: 889 ASIGEISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHP 948 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 I K+G ++ + YA + I GV Sbjct: 949 KCSLILRINVDFKN----------YKSYMSSKYGANEYEWEEMLLYAKKH-NLNIVGVSF 997 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 H+GS + F A KL RD+ + G N I++GGG Sbjct: 998 HVGSNTKNLFDFCLAIKLCRDVFDMSSNMGFNFYIINLGGGYP 1040 >gi|124802820|ref|XP_001347606.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium falciparum 3D7] gi|23495189|gb|AAN35519.1|AE014834_16 S-adenosylmethionine decarboxylase-ornithine decarboxylase [Plasmodium falciparum 3D7] Length = 1434 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 1/114 (0%) Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 V ++ S S + +++ R +Y ++ N N A+ Sbjct: 1306 VVNINDNRYNYFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMN-FNLYLAN 1364 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + G C+ D I + D L E GAY V S +N ++ + Sbjct: 1365 VFGQSCDGLDMINSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 1418 Score = 58.3 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 85/223 (38%), Gaps = 15/223 (6%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L + T C + I Y+ F Y++K+N+++ VIK L L D Sbjct: 843 LNENIDTSVVCINLQKILAQYVRFKKNLPH--VTPFYSVKSNNDEVVIKFLYGLNCNFDC 900 Query: 81 VSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 S GE+ + + +RI+F+ K+I+ + A + I ++ ELK + + Sbjct: 901 ASIGEISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHP 960 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 I K+G ++ + YA + I GV Sbjct: 961 KCSLILRINVDFKN----------YKSYMSSKYGANEYEWEEMLLYAKKH-NLNIVGVSF 1009 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 H+GS + F A KL RD+ + G N I++GGG Sbjct: 1010 HVGSNTKNLFDFCLAIKLCRDVFDMSSNMGFNFYIINLGGGYP 1052 >gi|302842606|ref|XP_002952846.1| hypothetical protein VOLCADRAFT_93499 [Volvox carteri f. nagariensis] gi|300261886|gb|EFJ46096.1| hypothetical protein VOLCADRAFT_93499 [Volvox carteri f. nagariensis] Length = 499 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 44 FSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 AF +T+ +A+KAN + V++ + G G ++ S GELR AL+ P +R+VF Sbjct: 1 MRAAFP-HNTLHTFAVKANPVKRVLELMRDAGLGAEVASLGELRHALSCGFPPDRVVFDS 59 Query: 104 VGKTIDEIDLALQSG 118 KT E+ AL++G Sbjct: 60 PIKTAAELRFALEAG 74 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 36/121 (29%), Gaps = 20/121 (16%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNP 329 +++ E GR LVA V +V K+ + V+ + + +R + + Sbjct: 296 QLVTEFGRCLVAKSVFAVGRVEYSKRCGGRRVVVSGLGGDLLLRAVYLPETWPVRVELYG 355 Query: 330 AGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIP 389 R LP D + + GAY YNSR Sbjct: 356 IDGRRKYP--------------------PLPPSCDWVVVPDVGAYCLSMYSRYNSRCSPA 395 Query: 390 E 390 Sbjct: 396 V 396 >gi|294931193|ref|XP_002779780.1| arginine/diaminopimelate/ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983] gi|239889442|gb|EER11575.1| arginine/diaminopimelate/ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983] Length = 78 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 1/53 (1%) Query: 337 HADIVGPICETGDFIALNR-KIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + GP C+ D I + GD L GAY + +N Sbjct: 13 TQVLFGPTCDGFDTIMQGVTHLPEMEIGDHLLWRNMGAYTTAAATNFNGFDTP 65 >gi|22297069|gb|AAM94458.1| ornithine decarboxylase [Carica papaya] Length = 251 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 91/261 (34%), Gaps = 11/261 (4%) Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 A+K N + + LA +GS D S E+ L+ + ERIVF+ K +I A + Sbjct: 2 AVKCNPEPSFLSMLAAMGSNFDCASRAEIEYVLSLGISPERIVFANPCKPESDIIFAEKV 61 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 G+ +SE E+ + I + + + Sbjct: 62 GVNLTTYDSEDEVYENKKHHPKCELLLRI----------KPMNDGNARCPMGPKYGALPE 111 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + +SGV HIGS ++ A + + + G + ++ Sbjct: 112 EIEPLLRIAQASRLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETAAKFGMSKMNVLDI 171 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 GG + H ++ A H + + II EPGRF L T +I + Sbjct: 172 GGGFTSGHQFTTAATAVKSALQQH-FSNEPELTIIAEPGRFFAETAFTLATTIIGKRVRG 230 Query: 298 DKTFVILDVAMNDFMRPTLYD 318 D ++ + M LYD Sbjct: 231 DLREYWINDGLYGSMNCVLYD 251 >gi|295835319|ref|ZP_06822252.1| pyridoxal-dependent decarboxylase, C- sheet domain-containing protein [Streptomyces sp. SPB74] gi|295825426|gb|EDY43323.2| pyridoxal-dependent decarboxylase, C- sheet domain-containing protein [Streptomyces sp. SPB74] Length = 531 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTM--VCYALKANSNQAVIKTLAHLGSGL 78 L + +P +N F A D V +A KAN + A+++ LA +GL Sbjct: 28 LVEGLGSPLNVVLPQQAVENARRFEAARDRHHLRGTVYFAHKANRSSALVRALATSRAGL 87 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 D+ S EL L + +RI +G + Sbjct: 88 DVASLEELAHGLGSGFTPDRIGATGPKEPEFLW 120 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 29/90 (32%), Gaps = 15/90 (16%) Query: 330 AGDRLHIHADIVGPICETGDFIALNRKIALPR---PGDLLYIEKTGAYGA--VQSGTYNS 384 G+ + G +C D I R + LPR PG+LL T Y Sbjct: 399 PGEGATAGVYLHGNLCLESDLITR-RLVQLPRLPIPGELLAFANTAGYAMDFSAHSA-ER 456 Query: 385 RLLIPEIMVN---GSQFHIIRPRMTFQELI 411 R ++ + G + R T E Sbjct: 457 RPPARKVALEQAPGGAW-----RWTLDEQW 481 >gi|317476226|ref|ZP_07935477.1| carboxynorspermidine decarboxylase [Bacteroides eggerthii 1_2_48FAA] gi|316907637|gb|EFV29340.1| carboxynorspermidine decarboxylase [Bacteroides eggerthii 1_2_48FAA] Length = 255 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 60/214 (28%), Gaps = 14/214 (6%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 +P Y + KN + D + A K+ + S Sbjct: 9 FPSPCYIMEEELLRKNLELIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVY 68 Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E R A + T ++ S ++ + + G+ Sbjct: 69 EARLA--LEEFGSKAHTYSPAYTEAGFPEIMRC-SSHITFNSLAQFRRFYPMIQADGQGI 125 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 RVNP+ + + + +FG+ A L V G+D Sbjct: 126 SCGIRVNPEYSEVETELYNPCAPGTRFGV----------MAEQLSDVLPQGIDGF-HCHC 174 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 S ++ + L L + ++ +++GG Sbjct: 175 HCESSSYELERTLEHLEAKFSRWFPQLKWLNLGG 208 >gi|237709819|ref|ZP_04540300.1| carboxynorspermidine decarboxylase [Bacteroides sp. 9_1_42FAA] gi|229455912|gb|EEO61633.1| carboxynorspermidine decarboxylase [Bacteroides sp. 9_1_42FAA] Length = 212 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 22/194 (11%), Positives = 44/194 (22%), Gaps = 3/194 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 V +P Y + KN + D + A K+ + S Sbjct: 6 KVPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFSVFREYIRYTTASSV 65 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E R A + D + S S+ + + G+K Sbjct: 66 YEARLAYEEFGSKAH---TYSPAYTDTDFPVIMQCSSHITFNSFSQFRRFYPMVKASGEK 122 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 R+NP+ + + + +FG+ + + Sbjct: 123 ISCGIRINPEYSEVEVELYNPCAPGTRFGVTADLLPETLPEGIEGFHCHCHCESSSYELE 182 Query: 204 IDQIESFHKAFKLL 217 + Sbjct: 183 HTLQHIEETFARWF 196 >gi|154495143|ref|ZP_02034148.1| hypothetical protein PARMER_04190 [Parabacteroides merdae ATCC 43184] gi|154085693|gb|EDN84738.1| hypothetical protein PARMER_04190 [Parabacteroides merdae ATCC 43184] Length = 630 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 67/341 (19%), Positives = 117/341 (34%), Gaps = 35/341 (10%) Query: 15 NVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKA 61 V L +L V+ P ++ +N F + Y +K Sbjct: 41 GVDLRELVDELQLRDVEAPVLIRFPDILDNRIEKIANCFKQASDEYGYKAQNFIIYPIKV 100 Query: 62 NSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA--- 114 N + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 101 NQMRPVVEEIIGHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIICNGYKDESYIELALLA 160 Query: 115 -LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 VE +EL + + A L + I R+ + + + S G Sbjct: 161 QKMGKRIFLVVEKINELTLIAKMAKQLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLT 220 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 + +L + + HIGSQ+ +I A + QL + G NI+ Sbjct: 221 SSELLEALDFLEKKDLTDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHAMGFNIEF 280 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFL 279 +D+GGGLG+ Y S S I +Y + II E GR L Sbjct: 281 VDIGGGLGVDYDGTRSSNSESSVNYSIQEYVNDSISTMVDASDKNGIPHPNIITESGRSL 340 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 A +L+ +V+ + + + LY+ + Sbjct: 341 TAHHSVLIFEVLETATLPEMDEDFEVSESDHELVHELYEIW 381 >gi|289809912|ref|ZP_06540541.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 60 Score = 61.4 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 21/38 (55%) Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNY 41 F++ +G L E V L+ LA TPFY +S I +N Sbjct: 23 FQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNI 60 >gi|148240725|ref|YP_001226112.1| arginine decarboxylase [Synechococcus sp. WH 7803] gi|147849264|emb|CAK24815.1| Arginine decarboxylase [Synechococcus sp. WH 7803] Length = 636 Score = 61.4 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 90/254 (35%), Gaps = 21/254 (8%) Query: 14 ENVSLEKL-----AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LK 60 ++ L +L A + P +E AFD YA +K Sbjct: 47 GSIDLIELVEGLQARDLGLPLLIRFDDILEDRLERLHAAFDRAIAHYGYAGRYQGVFPVK 106 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL- 115 N + V++ + G GL+ S+ EL AL+ + ++ K ++ A+ Sbjct: 107 CNQQRHVVERIVESGQRWHFGLEAGSKAELLIALSLLNDPDALLICNGYKDQRYLETAIL 166 Query: 116 ---QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E++ + + + LG I R + S G + Sbjct: 167 ARKLGRQPVVVIEQPDEVERIIRASDHLGAAPMIGIRARLSTRSTGRWGSSVGDRAKFGL 226 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + A + ++ + HIGSQI+ I A + + +L G + Sbjct: 227 SIPELLDTTEALRNAGLLKELRLLHFHIGSQINDIAVLKDALQEAGQIYGELHRLGAPMG 286 Query: 233 HIDVGGGLGIAYHS 246 +DVGGGLG+ Y Sbjct: 287 FLDVGGGLGVDYDG 300 >gi|23012521|ref|ZP_00052585.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum magnetotacticum MS-1] Length = 121 Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Query: 329 PAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSGT-YNS 384 P + + GP C++ D + LP GD ++IE TGAY + +N Sbjct: 53 PRDEDRTAPCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGTGAYTTTYAAVAFNG 112 Query: 385 RLLIPEIMV 393 + +I++ Sbjct: 113 FPPLEQIVI 121 >gi|237716693|ref|ZP_04547174.1| arginine decarboxylase [Bacteroides sp. D1] gi|262405469|ref|ZP_06082019.1| arginine decarboxylase [Bacteroides sp. 2_1_22] gi|294809666|ref|ZP_06768356.1| arginine 2-monooxygenase [Bacteroides xylanisolvens SD CC 1b] gi|229442676|gb|EEO48467.1| arginine decarboxylase [Bacteroides sp. D1] gi|262356344|gb|EEZ05434.1| arginine decarboxylase [Bacteroides sp. 2_1_22] gi|294443151|gb|EFG11928.1| arginine 2-monooxygenase [Bacteroides xylanisolvens SD CC 1b] gi|295086234|emb|CBK67757.1| arginine decarboxylase [Bacteroides xylanisolvens XB1A] Length = 630 Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 112/310 (36%), Gaps = 35/310 (11%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L++L +Q +P ++ F A + + Y +K N Sbjct: 42 VDLKELVDELQLRDVASPMLVRFPDILDNRIEKMSSCFKQAAEEYGYKAQNFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +ELK + + A L + I R+ + + + S G Sbjct: 162 KMGKRIYLVVEKMNELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L S + + HIGSQ+ +I A + QL S G N++ + Sbjct: 222 SELLEALDFLESKGLKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFLV 280 D+GGGLG+ Y S I +Y + II E GR L Sbjct: 282 DIGGGLGVDYDGTRSSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALT 341 Query: 281 ADVGILVTKV 290 A +L+ +V Sbjct: 342 AHHSVLIFEV 351 >gi|224536691|ref|ZP_03677230.1| hypothetical protein BACCELL_01567 [Bacteroides cellulosilyticus DSM 14838] gi|224521782|gb|EEF90887.1| hypothetical protein BACCELL_01567 [Bacteroides cellulosilyticus DSM 14838] Length = 630 Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 118/349 (33%), Gaps = 39/349 (11%) Query: 7 FEGSLHAENVSLEKLAHVVQ-----TPFYCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 G V L++L +Q P ++ F A + Sbjct: 37 KNGV----GVDLKELVDELQLRDVAAPMLIRFPDILDNRIEKTSSCFRQAAEEYGYKAQN 92 Query: 55 -VCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 + Y +K N + V++ + G GL+ S+ EL +A ++ ++ K Sbjct: 93 FIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAINSDSDSLIICNGYKDES 152 Query: 110 EIDLA----LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 I+LA VE +ELK + + A L I R+ + + + S G Sbjct: 153 YIELALLAQKMGKRIFLVVEKMNELKLIAKMAKQLNVMPNIGIRIKLASSGSGKWEDSGG 212 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + +L S + + HIGSQ+ +I A + QL Sbjct: 213 DASKFGLSSSELLEALDFLDSKGLKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLH 272 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKI 271 + G ++ +D+GGGLG+ Y S S I +Y + I Sbjct: 273 AMGFKVEFVDIGGGLGVDYDGTRSSSSESSVNYSIQEYVNDSISTLVDASDKNGIPHPNI 332 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 I E GR L A +L+ +V+ + + + LY + Sbjct: 333 ITESGRALTAHHSVLIFEVLETTTLPEWDDDEEVTEEDHELVQELYGIW 381 >gi|189465062|ref|ZP_03013847.1| hypothetical protein BACINT_01406 [Bacteroides intestinalis DSM 17393] gi|189437336|gb|EDV06321.1| hypothetical protein BACINT_01406 [Bacteroides intestinalis DSM 17393] Length = 630 Score = 61.0 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 118/349 (33%), Gaps = 39/349 (11%) Query: 7 FEGSLHAENVSLEKLAHVVQ-----TPFYCYSTTAIEKNYLT----FSNAFDGMDTM--- 54 G V L++L +Q P ++ F A + Sbjct: 37 KNGV----GVDLKELVDELQLRDVAAPMLIRFPDILDNRIEKTSSCFRQAAEEYGYKAQN 92 Query: 55 -VCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 + Y +K N + V++ + G GL+ S+ EL +A ++ ++ K Sbjct: 93 FIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAINSDSDSLIICNGYKDES 152 Query: 110 EIDLA----LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 I+LA VE +ELK + + A L I R+ + + + S G Sbjct: 153 YIELALLAQKMGKRIFLVVEKMNELKLIAKMAKQLNVMPNIGIRIKLASSGSGKWEDSGG 212 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + +L S + + HIGSQ+ +I A + QL Sbjct: 213 DASKFGLSSSELLEALDFLESKGLKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLH 272 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKI 271 + G ++ +D+GGGLG+ Y S S I +Y + I Sbjct: 273 AMGFKVEFVDIGGGLGVDYDGTRSSSSESSVNYSIQEYVNDSISTLVDASDKNGIPHPNI 332 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 I E GR L A +L+ +V+ + + + LY + Sbjct: 333 ITESGRALTAHHSVLIFEVLETTTLPEWDDDEEVTEEDHELVQELYGIW 381 >gi|312383524|gb|EFR28580.1| hypothetical protein AND_03314 [Anopheles darlingi] Length = 1312 Score = 61.0 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 14/37 (37%) Query: 352 ALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + + GD + + GAYG V + +N Sbjct: 3 CQDVDFPEHQIGDYIVFDNLGAYGMVLATNFNGFPKA 39 >gi|260172461|ref|ZP_05758873.1| arginine decarboxylase [Bacteroides sp. D2] gi|315920755|ref|ZP_07916995.1| biosynthetic arginine decarboxylase [Bacteroides sp. D2] gi|313694630|gb|EFS31465.1| biosynthetic arginine decarboxylase [Bacteroides sp. D2] Length = 630 Score = 61.0 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 113/310 (36%), Gaps = 35/310 (11%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 V L++L +Q +P ++ S+ F + + Y +K N Sbjct: 42 VDLKELVDELQLRDVASPMLIRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +ELK + + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKMNELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L S + + HIGSQ+ +I A + QL S G N++ + Sbjct: 222 SELLEALDFLESKGMKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFLV 280 D+GGGLG+ Y S I +Y + II E GR L Sbjct: 282 DIGGGLGVDYDGTRSSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALT 341 Query: 281 ADVGILVTKV 290 A +L+ +V Sbjct: 342 AHHSVLIFEV 351 >gi|237720425|ref|ZP_04550906.1| arginine decarboxylase [Bacteroides sp. 2_2_4] gi|293370432|ref|ZP_06616985.1| arginine 2-monooxygenase [Bacteroides ovatus SD CMC 3f] gi|299147088|ref|ZP_07040155.1| arginine 2-monooxygenase [Bacteroides sp. 3_1_23] gi|229450176|gb|EEO55967.1| arginine decarboxylase [Bacteroides sp. 2_2_4] gi|292634424|gb|EFF52960.1| arginine 2-monooxygenase [Bacteroides ovatus SD CMC 3f] gi|298514973|gb|EFI38855.1| arginine 2-monooxygenase [Bacteroides sp. 3_1_23] Length = 630 Score = 61.0 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 113/310 (36%), Gaps = 35/310 (11%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 V L++L +Q +P ++ S+ F + + Y +K N Sbjct: 42 VDLKELVDELQLRDVASPMLIRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +ELK + + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKMNELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L S + + HIGSQ+ +I A + QL S G N++ + Sbjct: 222 SELLEALDFLESKGMKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFLV 280 D+GGGLG+ Y S I +Y + II E GR L Sbjct: 282 DIGGGLGVDYDGTRSSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALT 341 Query: 281 ADVGILVTKV 290 A +L+ +V Sbjct: 342 AHHSVLIFEV 351 >gi|160883937|ref|ZP_02064940.1| hypothetical protein BACOVA_01911 [Bacteroides ovatus ATCC 8483] gi|156110667|gb|EDO12412.1| hypothetical protein BACOVA_01911 [Bacteroides ovatus ATCC 8483] Length = 630 Score = 61.0 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 113/310 (36%), Gaps = 35/310 (11%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 V L++L +Q +P ++ S+ F + + Y +K N Sbjct: 42 VDLKELVDELQLRDVASPMLIRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +ELK + + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKMNELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L S + + HIGSQ+ +I A + QL S G N++ + Sbjct: 222 SELLEALDFLESKGMKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFLV 280 D+GGGLG+ Y S I +Y + II E GR L Sbjct: 282 DIGGGLGVDYDGTRSSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALT 341 Query: 281 ADVGILVTKV 290 A +L+ +V Sbjct: 342 AHHSVLIFEV 351 >gi|298480535|ref|ZP_06998732.1| arginine 2-monooxygenase [Bacteroides sp. D22] gi|298273356|gb|EFI14920.1| arginine 2-monooxygenase [Bacteroides sp. D22] Length = 630 Score = 61.0 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 111/310 (35%), Gaps = 35/310 (11%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L++L +Q +P ++ F A + + Y +K N Sbjct: 42 VDLKELVDELQLRDVASPMLVRFPDILDNRIEKMSSCFKQAAEEYGYKAQNFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +ELK + + A L + I R+ + + + S G Sbjct: 162 KMGKRIYLVVEKMNELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L S + + HIGSQ+ +I A + QL S G ++ + Sbjct: 222 SELLEALDFLESKGLKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFKVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFLV 280 D+GGGLG+ Y S I +Y + II E GR L Sbjct: 282 DIGGGLGVDYDGTRSSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALT 341 Query: 281 ADVGILVTKV 290 A +L+ +V Sbjct: 342 AHHSVLIFEV 351 >gi|261414912|ref|YP_003248595.1| arginine decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371368|gb|ACX74113.1| arginine decarboxylase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326162|gb|ADL25363.1| arginine 2-monooxygenase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 632 Score = 61.0 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 64/309 (20%), Positives = 104/309 (33%), Gaps = 34/309 (11%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 + L +L V TP ++ F + +K N Sbjct: 43 IDLYELVQELSLRDVSTPVLLRFPDILDSRIEKIHECFTKATTEYGYKGGHYSIFPIKVN 102 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 +AV++ + G GL+ S+ EL LA + ++ K D I+LA Sbjct: 103 QQRAVLEEVVSHGSKFNIGLEAGSKPELHAVLANMENPDALIICNGYKDEDFIELALLAQ 162 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +EL + + +G + I R+ + + + S G Sbjct: 163 KMGKKIFIVVEKMNELHLVVDLSRRIGVRPNIGIRIKLASSGSGKWEESGGYHSKFGLNS 222 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + H+GSQI I + + Q+R G ++ + Sbjct: 223 SELLEALDYIKEEKMEDCMKLIHFHLGSQITNIRHIKNGLREVSQFYVQIRKMGMGLEFV 282 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVA 281 DVGGGLG+ Y S +YA+ + II E GR L A Sbjct: 283 DVGGGLGVDYDGTRSSNASSVNYSIQEYANDVVYAMFEACENADVPHPNIIAESGRALSA 342 Query: 282 DVGILVTKV 290 ILV V Sbjct: 343 HHSILVFNV 351 >gi|212550467|ref|YP_002308784.1| arginine decarboxylase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548705|dbj|BAG83373.1| arginine decarboxylase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 630 Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 118/346 (34%), Gaps = 35/346 (10%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L++L V P ++ S F + Y +K N Sbjct: 42 VDLKELIDELTLRDVDAPLLVRFPDILDNRIEKISGCFKTSAKEYNYTAQNFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + + G GL+ S+ EL LA ++ ++ K + I LA Sbjct: 102 QMRQVVEEIVNHGKKFNIGLEAGSKPELHAVLAINTCSDSLIVCNGYKDENYIRLALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +ELK + + A + I R+ + + + S G Sbjct: 162 KMGKNIFIVVEKLNELKLIAELAKKVKIYPNIGIRIKLASSGSGKWEESGGDGSKFGLSS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + ++ + + HIGSQ+ +I A + QLRS G+ I+ + Sbjct: 222 SELLEAIDFMNKNKLKDCLKLIHFHIGSQVTKIRRIKNALREASQFYVQLRSIGYEIEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYAS--------------LIHQYFGNLQCKIILEPGRFLV 280 D+GGGLG+ Y S S + Q II E GR L Sbjct: 282 DIGGGLGVDYDGTRNDRSESSMNYSIQEYVNDSISTLVDVCMKNSIPQPNIITECGRSLT 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 A +L+ +V+ + + LY + E+N+ Sbjct: 342 AHHSVLIFQVLETAILPEWKEDEKLPKNTHELVQELYKLWDEMNHP 387 >gi|254441493|ref|ZP_05054986.1| hypothetical protein OA307_908 [Octadecabacter antarcticus 307] gi|198251571|gb|EDY75886.1| hypothetical protein OA307_908 [Octadecabacter antarcticus 307] Length = 93 Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 2/57 (3%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 + + Y D + YA+KAN I L LGS D S GE+ Sbjct: 8 VMDLNRVVQQYHALKAGLGAAD--IHYAVKANPAPETIARLVDLGSHFDAASRGEIE 62 >gi|33864414|ref|NP_895974.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9313] gi|48474352|sp|Q7TUJ9|SPEA_PROMM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|33641194|emb|CAE22324.1| Orn/DAP/Arg decarboxylases family 2:Arginine decarboxylase [Prochlorococcus marinus str. MIT 9313] Length = 648 Score = 60.2 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 93/252 (36%), Gaps = 21/252 (8%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LKAN 62 + L +L +++ P +E +AF+ + YA +K N Sbjct: 52 LDLVELVEELKSRNLNLPLLIRFDDILEDRLERLHSAFEEAISKYGYAGRYQGVFPVKCN 111 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ L G GL+ S+ EL AL+ E ++ K I+ A Sbjct: 112 QQRHVVEQLVESGRQWHFGLEAGSKAELLIALSLVNDPEALLICNGYKDQRYIETAILAR 171 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E E++ + + + LG + R + H S G+K Sbjct: 172 RLGRQPVVVIEQPDEVERIIRSSQELGAAPFLGVRAKLTTRSTGHWSSSVGEKAKFGLSV 231 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + ++ A + + HIGSQI+ I A + + +L G + ++ Sbjct: 232 PDLLATVEALRQADLLSDLRLLHFHIGSQINDIAVLKDALQEAAQIYVELTKLGAPMGYL 291 Query: 235 DVGGGLGIAYHS 246 DVGGGLG+ Y Sbjct: 292 DVGGGLGVDYDG 303 >gi|29348803|ref|NP_812306.1| arginine decarboxylase [Bacteroides thetaiotaomicron VPI-5482] gi|253568852|ref|ZP_04846262.1| biosynthetic arginine decarboxylase [Bacteroides sp. 1_1_6] gi|48474840|sp|Q8A2B1|SPEA_BACTN RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|29340709|gb|AAO78500.1| putative arginine decarboxylase [Bacteroides thetaiotaomicron VPI-5482] gi|251840871|gb|EES68952.1| biosynthetic arginine decarboxylase [Bacteroides sp. 1_1_6] Length = 630 Score = 60.2 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 113/310 (36%), Gaps = 35/310 (11%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 V L++L +Q +P ++ S+ F + + Y +K N Sbjct: 42 VDLKELVDELQLRDVASPMLLRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +ELK + + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKMNELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L S + + HIGSQ+ +I A + QL S G N++ + Sbjct: 222 SELLEALDFMESKGLKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFLV 280 D+GGGLG+ Y S I +Y + II E GR L Sbjct: 282 DIGGGLGVDYDGTRSSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALT 341 Query: 281 ADVGILVTKV 290 A +L+ +V Sbjct: 342 AHHSVLIFEV 351 >gi|294645219|ref|ZP_06722938.1| putative arginine decarboxylase [Bacteroides ovatus SD CC 2a] gi|292639462|gb|EFF57761.1| putative arginine decarboxylase [Bacteroides ovatus SD CC 2a] Length = 330 Score = 60.2 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 95/252 (37%), Gaps = 21/252 (8%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L++L +Q +P ++ F A + + Y +K N Sbjct: 42 VDLKELVDELQLRDVASPMLVRFPDILDNRIEKMSSCFKQAAEEYGYKAQNFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +ELK + + A L + I R+ + + + S G Sbjct: 162 KMGKRIYLVVEKMNELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L S + + HIGSQ+ +I A + QL S G N++ + Sbjct: 222 SELLEALDFLESKGLKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFV 281 Query: 235 DVGGGLGIAYHS 246 D+GGGLG+ Y Sbjct: 282 DIGGGLGVDYDG 293 >gi|124024519|ref|YP_001018826.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9303] gi|166220851|sp|A2CDK1|SPEA_PROM3 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|123964805|gb|ABM79561.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str. MIT 9303] Length = 648 Score = 60.2 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 93/252 (36%), Gaps = 21/252 (8%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LKAN 62 + L +L +++ P +E +AF+ + YA +K N Sbjct: 52 LDLVELVEELKSRNLNLPLLIRFDDILEDRLEKLHSAFEQAISKYGYAGRYQGVFPVKCN 111 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ L G GL+ S+ EL AL+ E ++ K I+ A Sbjct: 112 QQRHVVEQLVESGRHWHFGLEAGSKAELLIALSLVNDPEALLICNGYKDQRYIETAILAR 171 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E E++ + + + LG I R + H S G+K Sbjct: 172 RLGRQPVVVIEQPDEVERIIRSSQELGAAPFIGVRAKLTTRSTGHWSSSVGEKAKFGLSF 231 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + ++ A + + HIGSQI+ I A + + +L G + ++ Sbjct: 232 PDLLSTVEALRQADLLSDLRLLHFHIGSQINDIAVLKDAIQEAGQIYVELTKLGAPMGYL 291 Query: 235 DVGGGLGIAYHS 246 DVGGGLG+ Y Sbjct: 292 DVGGGLGVDYDG 303 >gi|41582267|gb|AAS07881.1| hypothetical protein MBMO_EBAC080-L32B05.9 [uncultured marine bacterium 463] Length = 426 Score = 60.2 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 54/385 (14%), Positives = 112/385 (29%), Gaps = 36/385 (9%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + I + + A+K+ + ++ T +G D+ + Sbjct: 60 RELSTPALVFDLDTITARMQALAQTAANQNIACLLAVKSCPREPLLTTAQQHLAGFDVSN 119 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E R A + + + + T D A + V+S ++ Q+ Sbjct: 120 LAEYRALP-ADLSGKTVSLTSPQLTKDYYLFAARGNRLVVTVDSIAQCVNYLQQGAPFPY 178 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 R+ T T F P+ + P Sbjct: 179 ----VLRIQGGQLLPTSDAAYTNCSRFGFTAPMLEQLLQRPDVQAQPPCGWHVHHGS--- 231 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 +I S L+ L + I++GGG HS + + +A Sbjct: 232 ---EINSAATYQFLMAGLAKLGAQLPEPPAIINLGGGW----HSVEKQQLNDLFALARKV 284 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + C + +EPG++ G+ V +V++ D +L+++M+ +R + Sbjct: 285 F--PEPCSVFIEPGQWFGKGAGLAVGEVVNKSGDDDNLGCVLNLSMDCHLRWSS-----P 337 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDF-----------IALNRKIALPRPGDLLYIEKT 371 + + G C D +A + + L G + + Sbjct: 338 RLLVPVQLPALKFAKVYLGGASCYEADSLGCFMLPYRQDLAHDTSLGL---GCRVLLSNI 394 Query: 372 GAYGAVQSGTYNSRLLIPEIMVNGS 396 Y + +N E + Sbjct: 395 SLYSLAWNQGFNGIAPATEYWLRNG 419 >gi|153809143|ref|ZP_01961811.1| hypothetical protein BACCAC_03453 [Bacteroides caccae ATCC 43185] gi|149128119|gb|EDM19339.1| hypothetical protein BACCAC_03453 [Bacteroides caccae ATCC 43185] Length = 630 Score = 60.2 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 64/310 (20%), Positives = 111/310 (35%), Gaps = 35/310 (11%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 V L++L +Q P ++ S+ F + + Y +K N Sbjct: 42 VDLKELVDELQLRDVAAPTLVRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +ELK + + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKMNELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L S + + HIGSQ+ +I A + QL + G ++ + Sbjct: 222 SELLEALDFMESKGLKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHAMGFKVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFLV 280 D+GGGLG+ Y S I +Y + II E GR L Sbjct: 282 DIGGGLGVDYDGTRSSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALT 341 Query: 281 ADVGILVTKV 290 A +L+ +V Sbjct: 342 AHHSVLIFEV 351 >gi|282877082|ref|ZP_06285924.1| arginine 2-monooxygenase [Prevotella buccalis ATCC 35310] gi|281300764|gb|EFA93091.1| arginine 2-monooxygenase [Prevotella buccalis ATCC 35310] Length = 630 Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 71/377 (18%), Positives = 120/377 (31%), Gaps = 44/377 (11%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 + L + V +P ++ F+ A D + Y +K N Sbjct: 42 IDLRDVMDELALRDVSSPVLLRFPDILDNRIEKTASCFAQAAKEYDYKAENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 Q V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMQPVVEEIISHGQKFNLGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E +EL + + A +G + I R+ + + S G Sbjct: 162 KMGKRIFIVIEKLNELDIIAKAAKKIGVRPNIGIRIKLASSGSGKWADSGGDASKFGLNS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + HIGSQI +I A + L G+N+ + Sbjct: 222 SELLLALKMLEEKGLKDCLHLIHFHIGSQITKIRRIQTALREAAQYYINLHKMGYNVDFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL--------------QCKIILEPGRFLV 280 D GGGLG+ Y S S I +Y + +I E GR L Sbjct: 282 DCGGGLGVDYDGTRSSSSESSVNYSIQEYVNDCIYTFIDAANKNGVPHPNLITESGRSLT 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH--EINYIVNPAGDRLHIHA 338 A +LV V+ + LY+ + ++ D I Sbjct: 342 AHHSVLVIDVLETASLPSMPDEFEPTEEEHQLVKDLYEIWDNLNPRSMLEDWHDAEQIRE 401 Query: 339 DIVGPICETGDFIALNR 355 E+ D AL Sbjct: 402 -------ESLDLFALGI 411 >gi|167840073|ref|ZP_02466757.1| iron-sulfur cluster-binding protein, rieske family/putative carboxynorspermidine decarboxylase [Burkholderia thailandensis MSMB43] Length = 1193 Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 44/190 (23%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + TP + Y A+ + Y LK S+ ++ +A G S Sbjct: 727 DALDTPAFVYDERALRDALSAMHALLGDSGCRLLYPLKPFSHAGALECIAPHVDGFAASS 786 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + A A I + + ++ + + Y + A L Sbjct: 787 PFEAAFSRALLGRAGSIHLTTPALSDRDLGAIVDNCDYVALNSLSQWGRLHAAFAGRLSC 846 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 I + + +A K + L G+ Sbjct: 847 GLRINPQYSVVADARYDPCRPHSKLGVPLDAMERAVADDPRALQGLQGIHFHTNCDSPDF 906 Query: 203 QIDQIESFHK 212 Sbjct: 907 WSACRNDRSH 916 >gi|115397045|ref|XP_001214114.1| hypothetical protein ATEG_04936 [Aspergillus terreus NIH2624] gi|114192305|gb|EAU34005.1| hypothetical protein ATEG_04936 [Aspergillus terreus NIH2624] Length = 292 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 96/303 (31%), Gaps = 32/303 (10%) Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 +R L+ V RI+F+ K+ + A SG+ ++ EL ++ Sbjct: 1 MRSVLSLGVDPSRIIFANPCKSALSLVFAQMSGVNLATFDNLDELDSIKTYHPDCRLVLR 60 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 I + KFG P + L A L ++GV H+G+ Sbjct: 61 IF----------ACDDDALLNLSQKFGAPEGSLLRLLERARELDL-NVTGVSFHVGTGAC 109 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + A + + + +Q + G+++ +D+GGG + + Sbjct: 110 NAAPYVMAIQNAKVVFEQAKRLGYDMNLLDIGGGFQDHNFEQIACHVAVALNDGL----- 164 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISI---------------KKSADKTFVILDVAMND 310 +II EPGR+ V LV KVIS ++ ++V + Sbjct: 165 PRDIRIIAEPGRYYVRTAYTLVCKVISRRRQISDPANLEPDMLYQNDGVYGSFMNVLIEK 224 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN-RKIALPRPGDLLYIE 369 + I GP C++ D + + GD L Sbjct: 225 ERLQPSLIPGSRHLHQHASKRRSGQHCYSIWGPTCDSIDCVTKQTVFDSEVNVGDWLKYS 284 Query: 370 KTG 372 G Sbjct: 285 NMG 287 >gi|121602208|ref|YP_989054.1| putative microcin immunity protein [Bartonella bacilliformis KC583] gi|120614385|gb|ABM44986.1| putative microcin immunity protein [Bartonella bacilliformis KC583] Length = 586 Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 69/399 (17%), Positives = 133/399 (33%), Gaps = 32/399 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 PF+ + T +A D+ + A+K+ S K LA G + S E Sbjct: 27 PFFLFDADNALAKAKTLISASKKYFTDSNIAVAIKSCSLGIFCKLLAEEGLNAKVCSADE 86 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + AL A P +RI+ G KT +++ AL+ + V+S SEL+ LN AV+ ++ Sbjct: 87 FQIALFAGFPNDRIILGGPLKTSEDLSFALEKDALIY-VDSVSELRKLNTLAVNKNRRYG 145 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + R++ + + K+E I S + + G +++GS + Sbjct: 146 VGIRLSHFYRNGKYSRFGITKEEYINDILP--------ILSNTDHLYLQGFHLYVGSNPE 197 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQH-IDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + + ++ D + S + Sbjct: 198 NYPKITDTLHHWLPFLVEHMPSSGHLDISTDFLTNPEPENYDPETIFRSIHDVLNSYDPN 257 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + + K+I E +L D ++ K + K D + ++++N ++ +H + Sbjct: 258 LSKRWKLIFELDHYLNKDSSYVIGKALGYKNHYDAKIIQTNLSINWITSI--HNWHHSLT 315 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 + + D + G C D ++ L G I YN Sbjct: 316 LLNDGDKDSTQDKQILAGFNCFEDDSLSPQGYYGLTE-GQHFLIRSC--------SNYNM 366 Query: 385 -------RLLIPEIMVNGSQFHI--IRPRMTFQELIELD 414 R P + I I T ++L + Sbjct: 367 QASNEWTRKKPPVYIWLRGSVLIAKISSSFTSRDLFHKE 405 >gi|153004826|ref|YP_001379151.1| arginine decarboxylase [Anaeromyxobacter sp. Fw109-5] gi|152028399|gb|ABS26167.1| arginine decarboxylase [Anaeromyxobacter sp. Fw109-5] Length = 660 Score = 59.8 bits (143), Expect = 9e-07, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 109/350 (31%), Gaps = 25/350 (7%) Query: 16 VSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 + L + + P + + AF G + Y +K N Sbjct: 58 IDLMDVVEDIRERKIGFPCVVRFQDVLRARVKQINEAFAKAVAEMGYGARYLGVYPIKVN 117 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G+ GL+ S+GEL L E + K + + LA Sbjct: 118 QMREVVEEILDAGAPYNYGLEAGSKGELLVVLGMNTNPEALTICNGYKDEEYLRLALLGR 177 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E SEL L + +G + I R T K + KFG+ Sbjct: 178 KLGRKVIVVIEKLSELPQLLKLGEEMGVEPMIGLRSKLTTR-GTGKWEGSSGDFAKFGLT 236 Query: 175 IHQIHSLYAYASTLPGVKI-SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 + ++ + H+GSQ+ +I A + +LR G I++ Sbjct: 237 VPELIHAVRILKDAKKEHCAKLLHFHVGSQLTEIRVVKDAVNEGARVYAKLRKMGLPIEY 296 Query: 234 IDVGGGLGIAYHSDHR--PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 DVGGG+G+ Y AS ++ ++ R V + V Sbjct: 297 FDVGGGMGVDYVGVQTNGNAQPGTIASTVNYTLDEYVGDVVYNVQRVCVNEGVPEPNLVT 356 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 ++ + + + + + + + +IV Sbjct: 357 ESGRAITAHHSCIIMNVFGHIEIGSAEEIAAASAPKPDEPKLVREMREIV 406 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 44/152 (28%), Gaps = 30/152 (19%) Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET---GDFIALN-- 354 + + ++ ++ G+ IV C++ D N Sbjct: 479 DQYMANFSLFQSAPDHWAFDQLFPIVPLHRMGEVPTKDCTIVDITCDSDGKIDRFIENDG 538 Query: 355 ----RKIALPRPGD--LLYIEKTGAYGAVQSGTYNSRLLIPE--IMVNGSQFHIIRPRMT 406 + RPG+ L + TGAY + +N + E + V+ Sbjct: 539 VDETLSLHSLRPGEPYYLGMFMTGAYQDIMGDMHNLFGRVNEIHVFVDD---------ED 589 Query: 407 FQELIELDSIPA--------WLQKTPKQSSEN 430 ++ + IP LQ P + S Sbjct: 590 PEDFYIEEVIPGDTIEKVLSRLQYEPAELSRR 621 >gi|304380083|ref|ZP_07362805.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304341349|gb|EFM07266.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 82 Score = 59.5 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 Y Y +E + +++ + + YA+KANS + ++ T++ G ++ S+GE+ Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIA 77 >gi|33860605|ref|NP_892166.1| arginine decarboxylase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|48474802|sp|Q7V3M9|SPEA_PROMP RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|33633547|emb|CAE18504.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 648 Score = 59.5 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 106/314 (33%), Gaps = 34/314 (10%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 + L KL + TP ++ +NAF + +K N Sbjct: 52 IDLFKLVKEFKSREINTPLIIRFNDILKDRIAELNNAFSQAIETYDYKNIYKGVFPIKCN 111 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL--- 115 + V++ + G GL++ S+ EL L+ + ++ K I+ A+ Sbjct: 112 QQRNVLEKIIEYGDRWNFGLEVGSKSELLIGLSILENQKSLLICNGYKDKKYIETAILAR 171 Query: 116 -QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E E+K + + L + R ++ S G Sbjct: 172 KLGKHPIIVIEQRDEVKRIIEAVKDLKATPILGIRSKLSSKSSGRWSKSVGDNSKFGLSI 231 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + ++ ++ + H+GSQI I A + + +L G +++I Sbjct: 232 PEIMLTIKELKEANLINEMMLLHFHVGSQISDISVIKDALQEASQIFVELSKLGAPMKYI 291 Query: 235 DVGGGLGIAYHSDHR------PPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVA 281 DVGGGLGI + S +YA+ + II E GR +++ Sbjct: 292 DVGGGLGIDFDGTKMSSNTSTNYSLQNYANDVIATVKDSCEVNNIQHPIIISESGRAIIS 351 Query: 282 DVGILVTKVISIKK 295 +L+ ++ Sbjct: 352 HCSVLIFNILGTSH 365 >gi|297622332|ref|YP_003703766.1| arginine decarboxylase [Truepera radiovictrix DSM 17093] gi|297163512|gb|ADI13223.1| arginine decarboxylase [Truepera radiovictrix DSM 17093] Length = 637 Score = 59.5 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 88/260 (33%), Gaps = 21/260 (8%) Query: 14 ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALK 60 E V L + V P +E + AF Y +K Sbjct: 45 ERVPLPDIIAELRERGVSLPLILRFPQILENRLERLNRAFAEAREKFGYESHYQGVFPIK 104 Query: 61 ANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + V++TLA G+ G++ S+ EL L + E ++ K D I LA Sbjct: 105 VNQRRVVVETLAEAGARFRTGVEAGSKAELALCLVQDIHPEALLCCNGFKDDDFIRLALW 164 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E +EL + + + +G + + R + + S G + Sbjct: 165 GRRLGKNVVITLEKFTELARVLRISEEMGIRPALGLRYKLHAQGSGQWEDSGGDRAKFGL 224 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + + V H+GSQ+ I A + +LR G I+ Sbjct: 225 STSEMLSVTQSLRERGMLDTLVMVHCHVGSQVTDIRKIRTAVREAAQTYVELRELGVEIR 284 Query: 233 HIDVGGGLGIAYHSDHRPPS 252 +++VGGGL + Y Sbjct: 285 YLNVGGGLAVDYDGSKTSFY 304 >gi|115719588|ref|XP_001180893.1| PREDICTED: similar to ornithine decarboxylase, partial [Strongylocentrotus purpuratus] gi|115802940|ref|XP_001196287.1| PREDICTED: similar to ornithine decarboxylase, partial [Strongylocentrotus purpuratus] Length = 94 Score = 59.5 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 F+ I + + + ++ YA+K N + V+K L+ L G D S+ Sbjct: 42 FFIGDLGDIIQKHRKWLRNLPRVEP--HYAVKCNPDLHVLKLLSGLNLGFDCASK 94 >gi|333029444|ref|ZP_08457505.1| Biosynthetic arginine decarboxylase [Bacteroides coprosuis DSM 18011] gi|332740041|gb|EGJ70523.1| Biosynthetic arginine decarboxylase [Bacteroides coprosuis DSM 18011] Length = 631 Score = 59.5 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 68/343 (19%), Positives = 119/343 (34%), Gaps = 35/343 (10%) Query: 13 AENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYAL 59 A +V L +L + TP ++ F A + + + Y + Sbjct: 39 AASVDLRELIDEMQLKDIATPLLVRFPDILDHRIENTAQCFKQASEEYNYKAQNFIIYPI 98 Query: 60 KANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA- 114 K N Q V+ + G GL+ S+ EL +A +E ++ K I+LA Sbjct: 99 KVNQMQPVVSEIISHGKKFNLGLEAGSKPELHAVIAINTDSESLIICNGYKDESYIELAL 158 Query: 115 ---LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF 171 VE +ELK + + L + I R+ + + + S G Sbjct: 159 LAQKMGKRIFLVVEKMNELKLIARLGKKLNVRPNIGIRIKLASSGSGKWEDSGGDASKFG 218 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 + +L S + + HIGSQ+ +I A + QL G + Sbjct: 219 LTSSELLEALDYLESKDMKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHKLGFAV 278 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGR 277 + +DVGGGLG+ Y + S + +Y + II E GR Sbjct: 279 EFVDVGGGLGVDYDGTRSASTGSSVNYTLQEYVNDSISSMVDASDKNGLPHPNIITESGR 338 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 L A +L+ +V+ + ++ + + LY + Sbjct: 339 ALTAHHSVLIFEVLETTSLPEWDDEMVVSENDHELVRELYSIW 381 >gi|682769|emb|CAA40813.1| mccE [Escherichia coli] Length = 521 Score = 59.5 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 106/348 (30%), Gaps = 23/348 (6%) Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ ++ G ++ S E+ A + + L V++ Sbjct: 1 MVQIISGKGLYAEVCSVDEM---NLAKRDGFKRIVFDGPLKKTSELLKAIEIGALIEVDN 57 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E K LN+ I R++ + N + + + + S Sbjct: 58 IDECKRLNELCKLHKLTCRIHLRLSHYYDDNLSRFGLSESEAINLLEML---------IS 108 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + + G +H+GS + E KA +L + + + + S Sbjct: 109 KSEYLILDGFHLHVGSNLPNAEKICKAIIQYHELILRYMPDDGTLNLGSGIPADSFSASS 168 Query: 247 DHRPPSSSDYA------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 D+ P + + I EPGR LV D G + KVIS K Sbjct: 169 DNPTPCPEVFFSSIYDTIKNCFGTVCDKWNYIFEPGRHLVEDFGYFIGKVISTKNRYGVK 228 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 ++ +N +D + + N D I G C D + + + Sbjct: 229 VAQTNIGINWIPSIRNWDHSFTLFHNHNHISDDKSDEYIIAGFNCFECDCLFPSVILPS- 287 Query: 361 RPGDLLY-IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHI--IRPRM 405 D L+ + GAY + +R L + +I I R Sbjct: 288 NLSDYLFSVRGCGAYDMQTGNQW-TRNLYAVYTITNDVVNISRIHRRE 334 >gi|78214019|ref|YP_382798.1| arginine decarboxylase [Synechococcus sp. CC9605] gi|78198478|gb|ABB36243.1| arginine decarboxylase [Synechococcus sp. CC9605] Length = 642 Score = 59.5 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 87/254 (34%), Gaps = 21/254 (8%) Query: 14 ENVSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LK 60 ++ L L +++ P +E AF+ YA +K Sbjct: 44 GSLDLVDLVSELKSRNLALPLLIRFDDILEDRLERLHAAFERAIAQYSYAGRYQGVFPVK 103 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + V++ L G GL+ S+ EL AL+ E ++ K I+ A Sbjct: 104 CNQQRHVVEELVSCGKRWNFGLEAGSKAELLIALSLLDDPEALLICNGYKDRLYIETAIL 163 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E+ + + + SLG I R + S G K Sbjct: 164 ARRLGRQPVVVIEQPDEVDRIIEASKSLGAAPYIGVRAKLSSRSTGRWGSSVGDKAKFGL 223 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + ++ + + HIGSQI+ I A + + +L G + Sbjct: 224 SIPELLATVERLRDNNLLQDLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMG 283 Query: 233 HIDVGGGLGIAYHS 246 +DVGGGLGI Y Sbjct: 284 FLDVGGGLGIDYDG 297 >gi|56377973|dbj|BAD74164.1| ornithine decarboxylase [Malus x domestica] Length = 173 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 39/92 (42%) Query: 57 YALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 YA+K N A I LA LG+ D S+ E+ L+ V RIV++ K + + A Sbjct: 1 YAVKCNPEPAFIAALATLGASFDCASKVEIEAILSHGVSPSRIVYANPCKGENHLRHAAG 60 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 G+ +S EL + + IA Sbjct: 61 VGVNLATFDSMDELNKIKRCHPKCSLLLRIAV 92 >gi|88809770|ref|ZP_01125276.1| arginine decarboxylase [Synechococcus sp. WH 7805] gi|88786154|gb|EAR17315.1| arginine decarboxylase [Synechococcus sp. WH 7805] Length = 636 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 96/255 (37%), Gaps = 23/255 (9%) Query: 14 ENVSLEKL-----AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LK 60 ++ L +L A + P +E AFD Y+ +K Sbjct: 47 GSIDLIELVEGLQARDLGLPLLIRFDDILEDRLERLHAAFDRAIAHYGYSGRYQGVFPVK 106 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL- 115 N + V++ L G GL+ S+ EL AL+ E ++ K ++ A+ Sbjct: 107 CNQQRHVVERLVDSGQRWHFGLEAGSKAELLIALSLLKDPEALLICNGYKDQRYLETAIL 166 Query: 116 ---QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E++ + Q + LG I R + T + S+ KFG Sbjct: 167 ARKLGRQPVVVIEQPDEVERIIQASDHLGAAPMIGIRARLSTRS-TGRWGSSVGDRAKFG 225 Query: 173 IPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 + I ++ A +K + + HIGSQI+ I A + + +L G + Sbjct: 226 LSIPELLDTTAALRDAGLLKELRLLHFHIGSQINDIAVLKDALQEAGQIYGELHRLGAPM 285 Query: 232 QHIDVGGGLGIAYHS 246 +DVGGGLGI Y Sbjct: 286 GFLDVGGGLGIDYDG 300 >gi|315226160|ref|ZP_07867948.1| conserved hypothetical protein [Parascardovia denticolens DSM 10105] gi|315120292|gb|EFT83424.1| conserved hypothetical protein [Parascardovia denticolens DSM 10105] Length = 258 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 65/195 (33%), Gaps = 11/195 (5%) Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGR 277 + +++ + I ID GGG + R Y I++ + EPG Sbjct: 58 FEYCKRIIAEYPTITTIDFGGGFYTFFAHRDRAEKVFSYIRTINEIKYANNLQFRFEPGA 117 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG-DRLHI 336 L+ G LVT V+S++ + D+ D + Y A D + Sbjct: 118 GLIGPFGYLVTTVVSLEH--GNRYFGDDLIGLDCSAWNICPWVIPKVYHYQEARRDTEYH 175 Query: 337 HADIVGPICETGDFIALNRK-------IAL-PRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 A + G DF +++ + R GD + I GAY +N Sbjct: 176 QAIVCGNSLYENDFFGKSQENRVPRLLVPDDLRVGDKIIITNVGAYTYTNFRNFNLLGRP 235 Query: 389 PEIMVNGSQFHIIRP 403 + + + I+ Sbjct: 236 EKYGYDSEEGKDIQR 250 >gi|3360275|gb|AAC27892.1| ornithine decarboxylase [Haemonchus contortus] Length = 110 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 45/94 (47%) Query: 56 CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 YA+K N+++ +++TLA LG+G D S E+ + V AERIV++ KT I A Sbjct: 1 FYAVKCNTDRVLVRTLAALGTGFDCASREEIDIVMDLGVSAERIVYANPCKTRSFITHAK 60 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 + + +S EL + Q IA Sbjct: 61 ERNVSMMTFDSAEELAKVAQLHPQAKMILRIAVS 94 >gi|15858871|gb|AAL08053.1| ornithine decarboxylase-like protein variant 6 [Homo sapiens] gi|56202450|emb|CAI19353.1| arginine decarboxylase [Homo sapiens] gi|119627881|gb|EAX07476.1| arginine decarboxylase, isoform CRA_h [Homo sapiens] Length = 204 Score = 59.1 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83 F+ AI + + F YA+K NS+ V+K LA LG G ++ Sbjct: 41 FFVADLGAIVRKHFCFLKCLPR--VRPFYAVKCNSSPGVLKVLAQLGLGFSCANK 93 >gi|108759559|ref|YP_630959.1| arginine decarboxylase [Myxococcus xanthus DK 1622] gi|108463439|gb|ABF88624.1| arginine decarboxylase [Myxococcus xanthus DK 1622] Length = 696 Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 90/258 (34%), Gaps = 21/258 (8%) Query: 15 NVSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 N+ L++L V P T + + + AF Y +K Sbjct: 68 NMDLKELVDEVRRRGIGLPLLIRFTDVLRHRVVHLNEAFRKAMSDQGFKGGYRGVYPIKV 127 Query: 62 NSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 N ++ V++TL G GL+ S+ EL +A +V K + I+ AL Sbjct: 128 NQHRYVVETLIEAGKGYNYGLEAGSKPELLAVMALLENENALVICNGYKDEEYIETALFY 187 Query: 118 ----GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 VE SEL + + A G + RV + S G + Sbjct: 188 SRLGRNVILVVEKPSELPLIAEVARRTGIAPRLGIRVKLSTRGAGKWEASGGDRSKFGLT 247 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 ++ + + H+GSQI I + A + + ++ G +++ Sbjct: 248 SSELMNCIGFMKDAGLLNSFELLHFHLGSQISNIRNVKNALREVGCFYVEVARQGAPLKY 307 Query: 234 IDVGGGLGIAYHSDHRPP 251 +DVGGGLG+ Y Sbjct: 308 LDVGGGLGVDYDGSQTNF 325 >gi|224025224|ref|ZP_03643590.1| hypothetical protein BACCOPRO_01958 [Bacteroides coprophilus DSM 18228] gi|224018460|gb|EEF76458.1| hypothetical protein BACCOPRO_01958 [Bacteroides coprophilus DSM 18228] Length = 630 Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 76/398 (19%), Positives = 133/398 (33%), Gaps = 51/398 (12%) Query: 2 SAFKYFE-GSLHA----ENV--SLEKLAHVVQ----T-PFYCYSTTAIEKNYLT----FS 45 S F E G + + V L++L +Q T P ++ F Sbjct: 21 SYFSINEKGHVTVTPRKDGVAVDLKELVDELQLRDVTAPMLVRFPDILDNRIEKISNCFQ 80 Query: 46 NAFDGMDTM----VCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAE 97 A D + Y +K N + V++ + G GL+ S+ EL +A ++ Sbjct: 81 QAADEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAINTDSD 140 Query: 98 RIVFSGVGKTIDEIDLA----LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD 153 ++ K I+LA VE +EL+ +++ A L + I R+ Sbjct: 141 SLIVCNGYKDESYIELALLAQKMGKRIFLVVEKLNELRLISRIAKQLNVRPNIGIRIKLA 200 Query: 154 INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKA 213 + + + S G + +L + + HIGSQ+ +I A Sbjct: 201 SSGSGKWEESGGDASKFGLTSSELLEALDFIEKKDMKDCLKLIHFHIGSQVTKIRRIKTA 260 Query: 214 FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN------- 266 + QL G ++ +D+GGGLG+ Y S S I +Y + Sbjct: 261 LREASQFYVQLHQLGFPVEFVDIGGGLGVDYDGTRSSYSESSVNYSIQEYVNDSISILVD 320 Query: 267 -------LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 II E GR L A +L+ +V+ + + LY Sbjct: 321 ASNKNGIPHPNIITESGRSLTAHHSVLIFEVLETASLPSMDEEFEVGPNDHELVQELYQI 380 Query: 320 YHEINY--IVNPAGDRLHIHADIVGPICETGDFIALNR 355 + +N ++ D I E+ D + Sbjct: 381 WDNLNQSRMLEAWHDAQQIRE-------ESLDLFSHGI 411 >gi|326794767|ref|YP_004312587.1| arginine decarboxylase [Marinomonas mediterranea MMB-1] gi|326545531|gb|ADZ90751.1| arginine decarboxylase [Marinomonas mediterranea MMB-1] Length = 630 Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 70/314 (22%), Positives = 113/314 (35%), Gaps = 36/314 (11%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAF--------DGMDTMVCYALKAN 62 V L +LA ++ P + + +F D + Y +K N Sbjct: 41 VDLTELAKALKEQNVSYPCLVRFPDILHSRIERITQSFCDAIDHYQYKADYAIVYPIKVN 100 Query: 63 SNQAVIKTL------AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 + V++ + GL+ S+ EL LA A+ I+ K + I LAL Sbjct: 101 QQRRVVEEITSCRPDNASKVGLEAGSKPELMAVLAMHQSADGIIVCNGYKDKEFIHLALM 160 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKK----APIAFRVNPDINANTHKKISTGKKEDKFG 172 + V E + + K+ I R+ +TH S G+K Sbjct: 161 AEKMGHQVFLVVEKFHELEWIIEEAKRLDVSPRIGIRIRLASTCSTHWGNSGGEKSKFGL 220 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + S+ + + + H+GSQI +I + K +L G NIQ Sbjct: 221 TTSQLLRSVQLLKNQNMVHCLELIHFHLGSQITRIRDIQNSLKECARYYSELHLMGVNIQ 280 Query: 233 HIDVGGGLGIAYHSDHRP------PSSSDYASLIHQYFGNLQ-------CKIILEPGRFL 279 +DVGGGLG+ Y S S+YA+ + F N+ II E GR + Sbjct: 281 WVDVGGGLGVDYEGTRSQSAYSANYSISEYANNVVFAFHNICEQYNLPHPHIISESGRAV 340 Query: 280 VADVGILVTKVISI 293 A +++ V S Sbjct: 341 TAHHAMIIADVFSH 354 >gi|224613246|gb|ACN60202.1| Antizyme inhibitor 1 [Salmo salar] Length = 299 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 74/250 (29%), Gaps = 18/250 (7%) Query: 158 THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 T + FG + L A ++ GV HI S D +++ A Sbjct: 7 TEASSEGDEMGMAFGSKLKDCRHLLESAKEQGL-QVVGVRFHIPSSCDDPQAYSHAVSDA 65 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGR 277 R + G ++ +D+GGG + + S+ L + + I+ EPG Sbjct: 66 RCVFDMGEDIGFSMTLLDIGGGFNGSETQLKQINSAVR-PLLDLYFPASSGVSIMAEPGS 124 Query: 278 FLVADVGILVTKVIS----------------IKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + V+ L +I+ + + + D F + Sbjct: 125 YYVSSSFTLAVNIIAKEVGARDLHGNHDEPSPNDEPEFLYYMNDGVYGSFTSKLADNVIP 184 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGT 381 + + + + GP + D + + GD L GAY T Sbjct: 185 APALPKSGVSEDPVFASSLWGPSGDELDQVVDQCLLPELSVGDWLIFNNAGAYSLGPPST 244 Query: 382 YNSRLLIPEI 391 + P Sbjct: 245 FTESPRPPVY 254 >gi|304383649|ref|ZP_07366108.1| arginine 2-monooxygenase [Prevotella marshii DSM 16973] gi|304335173|gb|EFM01444.1| arginine 2-monooxygenase [Prevotella marshii DSM 16973] Length = 630 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 114/340 (33%), Gaps = 35/340 (10%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 + L + V +P ++ F A D + Y +K N Sbjct: 42 IDLRDVMDELALRDVSSPVLLRFPDILDNRIEKTACCFQRAAKEYDYQGENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 Q V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMQPVVEEIISHGRKFNLGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E +EL + Q A L K I R+ + + + S G Sbjct: 162 KMGKRIFIVIEKLNELDIIAQAAKKLNVKPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + HIGSQ+ +I A + QL G++++ + Sbjct: 222 SELLQALDTMEKKGLHDCLKLIHFHIGSQVTKIRHIQTALREASQFYIQLHKLGYDVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL--------------QCKIILEPGRFLV 280 D GGGLG+ Y P S S I +Y + +I E GR L Sbjct: 282 DCGGGLGVDYDGTRSPNSESSVNYSIQEYVNDCLYTFIEAANANGIKHPNVITESGRSLT 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 A +L+ V+ + + LY+ + Sbjct: 342 AHHSVLIIDVLETASLPQMPEAFEPSEKDHKLVKDLYEIW 381 >gi|297569192|ref|YP_003690536.1| arginine decarboxylase [Desulfurivibrio alkaliphilus AHT2] gi|296925107|gb|ADH85917.1| arginine decarboxylase [Desulfurivibrio alkaliphilus AHT2] Length = 643 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 89/293 (30%), Gaps = 23/293 (7%) Query: 14 ENVSLEKL-----AHVVQT--PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYA 58 E +S+ L A P + + AF Y Sbjct: 46 EGISIPILEVAKEAREQGLHFPMLIRFHDLLRNRVARINRAFSEAIAEAEYRNQYRGVYP 105 Query: 59 LKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 +K N + V++ + G GL++ S+ EL ALA + ++ K D + +A Sbjct: 106 VKVNQLREVVEEILDAGHDYHHGLEVGSKPELHAALALHEDPDSLIVCNGYKDEDYVRVA 165 Query: 115 ----LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 VE E++ + + + I FRV S G+ Sbjct: 166 LIGRKLGKKVILVVEKVEEIRQIIAMVNKMKVEPLIGFRVRLMSGGKGKWAESGGENAKF 225 Query: 171 FGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 I + + + V HIGSQ+ I + KA + +L H Sbjct: 226 GLSTIDIMRASRLLQEANMAHCLKLVHFHIGSQVPDILTIKKAVREGAMFYAKLSKLAHP 285 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADV 283 GG + R S +++Y ++ I+ VA Sbjct: 286 GLEYLDVGGGLGVDYDGSRTTFHSSINYSLNEYARDVIYNIMDVCDAEEVAHP 338 >gi|307246498|ref|ZP_07528570.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306852561|gb|EFM84794.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 131 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 61/127 (48%), Positives = 80/127 (62%) Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 +A LGSG DIVS+GEL R LAA ++VFSGV K+ EI AL+ GI CFN+ES +EL Sbjct: 1 MARLGSGFDIVSQGELERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAEL 60 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 +N+ A LGK API+ RVNPD++A+TH ISTG KE+KFG+ + + Y Sbjct: 61 HRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTNEGNKYWEKRYEKK 120 Query: 191 VKISGVD 197 + Sbjct: 121 HRRKTYC 127 >gi|297193992|ref|ZP_06911390.1| LOW QUALITY PROTEIN: lysine/ornithine decarboxylase [Streptomyces pristinaespiralis ATCC 25486] gi|297152048|gb|EFH31498.1| LOW QUALITY PROTEIN: lysine/ornithine decarboxylase [Streptomyces pristinaespiralis ATCC 25486] Length = 79 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 5/68 (7%) Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGS-----QFHIIRPR 404 +A R + L PGD++ TGAY YNS QF +R Sbjct: 1 MLAEKRALPLLEPGDVVAALDTGAYYFSSHYGYNSLPRTAVHGFTTGADGEVQFATVRQA 60 Query: 405 MTFQELIE 412 + ++ Sbjct: 61 QSIGSIVA 68 >gi|291569782|dbj|BAI92054.1| arginine decarboxylase [Arthrospira platensis NIES-39] Length = 653 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 117/343 (34%), Gaps = 38/343 (11%) Query: 14 ENVSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALK 60 ++ L +L + P +E + F Y +K Sbjct: 63 GSIDLYELVESLKKRNLGLPLLIRFPDILEDRIERLNACFSKAIARYNYPGVYRGVYPVK 122 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 N + +I+ L G GL+ S+ EL ALA ++ K I+ A+ Sbjct: 123 CNQERHLIEDLVRFGEPYQLGLEAGSKPELLIALACLTTPGSLLICNGYKDQKYIETAML 182 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA-----NTHKKISTGKKEDKF 171 + E L + +++ + + + A + + KF Sbjct: 183 AQRLGRKTIIVME--QLEEVELAIAASQNLGIQPTLGVRAKLGSRGVGRWGGSTGDRAKF 240 Query: 172 GIPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 G+ I +I + L + + + HIGSQI I + A + + +L G N Sbjct: 241 GLTIPEIIQVCDRLQGLGMLDCLQLLHFHIGSQISSISAIKDAIREASQIYVELAKLGAN 300 Query: 231 IQHIDVGGGLGIAYH------SDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGR 277 +Q++DVGGGLG+ Y + + +YA+ I +I E GR Sbjct: 301 MQYLDVGGGLGVDYDGSKSNAPASKNYNMQNYANDIVAEVKEACEEGKVNAPVLISESGR 360 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + + ILV ++ + + ++ + +R Sbjct: 361 AIASHQSILVFDILGSSEPTAENPPTINDDDHLILRNLAETYQ 403 >gi|284052140|ref|ZP_06382350.1| arginine decarboxylase [Arthrospira platensis str. Paraca] Length = 653 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 117/343 (34%), Gaps = 38/343 (11%) Query: 14 ENVSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALK 60 ++ L +L + P +E + F Y +K Sbjct: 63 GSIDLYELVESLKKRNLGLPLLIRFPDILEDRIERLNACFSKAIARYNYPGVYRGVYPVK 122 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 N + +I+ L G GL+ S+ EL ALA ++ K I+ A+ Sbjct: 123 CNQERHLIEDLVRFGEPYQLGLEAGSKPELLIALACLTTPGSLLICNGYKDQKYIETAML 182 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA-----NTHKKISTGKKEDKF 171 + E L + +++ + + + A + + KF Sbjct: 183 AQRLGRKTIIVME--QLEEVELAIAASQNLGIQPTLGVRAKLGSRGVGRWGGSTGDRAKF 240 Query: 172 GIPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 G+ I +I + L + + + HIGSQI I + A + + +L G N Sbjct: 241 GLTIPEIIQVCDRLQGLGMLDCLQLLHFHIGSQISSISAIKDAIREASQIYVELAKLGAN 300 Query: 231 IQHIDVGGGLGIAYH------SDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGR 277 +Q++DVGGGLG+ Y + + +YA+ I +I E GR Sbjct: 301 MQYLDVGGGLGVDYDGSKSNAPASKNYNMQNYANDIVAEVKEACEEGKVNAPVLISESGR 360 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + + ILV ++ + + ++ + +R Sbjct: 361 AIASHQSILVFDILGSSEPTAENPPTINDDDHLILRNLAETYQ 403 >gi|209527786|ref|ZP_03276279.1| arginine decarboxylase [Arthrospira maxima CS-328] gi|209491773|gb|EDZ92135.1| arginine decarboxylase [Arthrospira maxima CS-328] Length = 653 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 118/343 (34%), Gaps = 38/343 (11%) Query: 14 ENVSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALK 60 ++ L +L + P +E + F Y +K Sbjct: 63 GSIDLYELVESLKKRNLGLPLLIRFPDILEDRIERLNACFSKAIARYNYPGVYRGVYPVK 122 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 N + +I+ L G GL+ S+ EL ALA ++ K I+ A+ Sbjct: 123 CNQERHLIEDLVRFGEPYQLGLEAGSKPELLIALACLTTPGALLICNGYKDRQYIETAML 182 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA-----NTHKKISTGKKEDKF 171 + E L + +++ + + + A + + KF Sbjct: 183 AQRLGRKTIVVME--QLEEVELAIAASQNLGIQPILGVRAKLGSRGVGRWGGSTGDRAKF 240 Query: 172 GIPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 G+ I +I + L + + + HIGSQI I + A + + +L G N Sbjct: 241 GLTIPEIIQVCDRLQGLGMLDCLQLLHFHIGSQISSISAIKDAIREASQIYVELAKLGAN 300 Query: 231 IQHIDVGGGLGIAYH------SDHRPPSSSDYASLIHQYFGNLQCK-------IILEPGR 277 +Q++DVGGGLG+ Y + + +YA+ I + +I E GR Sbjct: 301 MQYLDVGGGLGVDYDGSKTNAPASKNYNMQNYANDIVAEVKEACEQGKIDAPVLISESGR 360 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + + ILV ++ + + ++ + +R Sbjct: 361 AIASHQSILVFDILGSSEPSTANPPNINDDDHLLLRNLAETYQ 403 >gi|332829146|gb|EGK01810.1| biosynthetic arginine decarboxylase [Dysgonomonas gadei ATCC BAA-286] Length = 630 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 68/342 (19%), Positives = 114/342 (33%), Gaps = 35/342 (10%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 V L++L V P ++ S F + Y +K N Sbjct: 42 VDLKELMDELQLRDVSAPVLIRFPDILDNRIEKISTCFKLAAEEYEYKAQNHIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ L G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEELISHGKKFNIGLEAGSKPELHAVIAINTDSDSLIICNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +EL + + A L + I R+ + + + S G Sbjct: 162 KMGKRIFIVVEKLNELPLIAKVAKRLKIRPNIGIRIKLASSGSGKWEESGGDGSKFGLNS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + HIGSQI +I A + QL + G ++ + Sbjct: 222 SELLEALAYLEKNNMQESLRLIHFHIGSQITKIRRIKTALREAAQFYVQLHTMGFKVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQY--------------FGNLQCKIILEPGRFLV 280 D+GGGLG+ Y + S I +Y II E GR L Sbjct: 282 DIGGGLGVDYDGTRSSYNESSVNYSIQEYVNDSIATMVDAANKNDIPHPNIITESGRSLT 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 A ILV +V+ + + + LY + + Sbjct: 342 AHHSILVFEVLETATLPEWDEDEELSDDDHELVRELYQIWDD 383 >gi|332884947|gb|EGK05202.1| biosynthetic arginine decarboxylase [Dysgonomonas mossii DSM 22836] Length = 630 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 123/343 (35%), Gaps = 37/343 (10%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L++L V P ++ F A + + + Y +K N Sbjct: 42 VDLKELMDELQLRDVSAPVLIRFPDILDNRIEKISTCFKQAAEEYEYKGQNHIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ L G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEELISHGKKFNIGLEAGSKPELHAVIAINTDSDSLIICNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +E+ + + A L I R+ ++ + K +G KFG+ Sbjct: 162 KMGKHIFIVVEKLNEIPLIAKIAKRLKITPNIGIRIKLA-SSGSGKWEESGGDGSKFGLN 220 Query: 175 IHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 ++ AY + + + HIGSQI +I A + QL + G ++ Sbjct: 221 SSELLEALAYLEKANMQESLRLIHFHIGSQITKIRRIKTALREAAQFYVQLHAMGFKVEF 280 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFL 279 +D+GGGLG+ Y + S I +Y + II E GR L Sbjct: 281 VDIGGGLGVDYDGTRSSYNESSVNYSIQEYVNDSIATMVDAADKNGIPHPNIITESGRSL 340 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 A ILV +V+ + + + LY + + Sbjct: 341 TAHHSILVFEVLETATLPEWDEDKDLSEDDHELVKELYQIWDD 383 >gi|146340130|ref|YP_001205178.1| putative amino acid processing-like protein [Bradyrhizobium sp. ORS278] gi|146192936|emb|CAL76943.1| putative amino acid processing enzyme-related protein (aldolase or racemase) [Bradyrhizobium sp. ORS278] Length = 359 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 1/74 (1%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GL 78 K+A TP +E+N +K + + + K G+ G+ Sbjct: 8 KIAREYGTPCAVIDMDKVERNIARIQAQCAAAGVANRPHIKTHKSPVLAKLQIEAGAQGI 67 Query: 79 DIVSEGELRRALAA 92 GE A Sbjct: 68 TCQKIGEAEIMADA 81 >gi|255692945|ref|ZP_05416620.1| arginine 2-monooxygenase [Bacteroides finegoldii DSM 17565] gi|260621256|gb|EEX44127.1| arginine 2-monooxygenase [Bacteroides finegoldii DSM 17565] Length = 630 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 110/310 (35%), Gaps = 35/310 (11%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L++L +Q P ++ F A + + Y +K N Sbjct: 42 VDLKELVDELQLRDVAAPMLVRFPDILDNRIEKMSSCFKQAAEEYGYKAQNFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +ELK + + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKMNELKLIAKMAKQLNVEPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L S + + HIGSQ+ +I A + QL S G ++ + Sbjct: 222 SELLEALDFLESKGMKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFKVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFLV 280 D+GGGLG+ Y S I +Y + II E GR L Sbjct: 282 DIGGGLGVDYDGTRSSSSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALT 341 Query: 281 ADVGILVTKV 290 A +L+ +V Sbjct: 342 AHHSVLIFEV 351 >gi|46397625|gb|AAR00209.1| ornithine decarboxylase [Magnaporthe grisea] Length = 286 Score = 58.3 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 105/297 (35%), Gaps = 40/297 (13%) Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S+ E+ + L V RI+++ KT + G+ ++ EL + + Sbjct: 1 GFDCASKTEIEQVLDMGVNPARIIYAQPCKTNSYVRYVAGEGVRQMTFDNADELYKIAKL 60 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 I T S + KFG + L A A L + + GV Sbjct: 61 FPEAELYLRIL----------TDDSSSLCRLSLKFGAALDATDGLLALARELG-LNVVGV 109 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 H+GS +F A + + +Q ++G +++ +DVGGG + D Sbjct: 110 SFHVGSGASDPLAFLNAVRDANFVFEQAAADGFDMKTLDVGGGFCSDDTFEAMAGVLRD- 168 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT-------------FVI 303 +L + + +I EPGR+ V+ + VI+ + D V Sbjct: 169 -ALDEYFSPHRGVSLIAEPGRYFVSAAFTIACNVIARRTVEDPNGSVYGSLAAAASYMVY 227 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAG--------------DRLHIHADIVGPICE 346 ++ + R ++D H + ++ +G I I GP C+ Sbjct: 228 VNDGLYGNFRSIMFDHQHPVAKVLRSSGNFFYNTTDADSPETPSEGIEYSIWGPTCD 284 >gi|152996852|ref|YP_001341687.1| arginine decarboxylase [Marinomonas sp. MWYL1] gi|150837776|gb|ABR71752.1| arginine decarboxylase [Marinomonas sp. MWYL1] Length = 634 Score = 58.3 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 104/297 (35%), Gaps = 31/297 (10%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLA------H 73 P + +N+F + Y +K N + V++ +A Sbjct: 58 PCLVRFPNILHSRIEKITNSFQQAIDYYDYQAKYAIVYPIKVNQQRRVVEEIAACQPDNA 117 Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 GL+ S+ EL LA A+ I+ K + I LAL + V E Sbjct: 118 ATVGLEAGSKPELMAVLAMHKNADGIIVCNGYKDREFIHLALMAEKMGHQVFIVVEKMHE 177 Query: 134 NQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP- 189 + K + R+ I + T ++G ++ KFG+ Q+ L Sbjct: 178 LDWILEEADKIGVQPRIGIRIRLASTCTTHWGNSGGEKSKFGLTTSQLLRAIDRLRELDL 237 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL------GIA 243 + + H+GSQI +I + K +L G ++ +DVGGGL Sbjct: 238 LHCLELIHFHLGSQITRIRDIQNSLKECARYYAELHQMGVKVKWVDVGGGLGVDYEGTRC 297 Query: 244 YHSDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILVTKVISI 293 + S +YA+ + F N +I E GR + A +++ V S Sbjct: 298 QNDFSANYSIGEYANNVVFAFHNVCEQYELPHPHLISESGRAVTAHHAMMIADVFSH 354 >gi|53711530|ref|YP_097522.1| arginine decarboxylase [Bacteroides fragilis YCH46] gi|60679791|ref|YP_209935.1| arginine decarboxylase [Bacteroides fragilis NCTC 9343] gi|253564410|ref|ZP_04841867.1| biosynthetic arginine decarboxylase [Bacteroides sp. 3_2_5] gi|265764924|ref|ZP_06093199.1| arginine decarboxylase [Bacteroides sp. 2_1_16] gi|81317136|sp|Q5LIQ3|SPEA_BACFN RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|81383885|sp|Q64ZT8|SPEA_BACFR RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|52214395|dbj|BAD46988.1| putative arginine decarboxylase [Bacteroides fragilis YCH46] gi|60491225|emb|CAH05973.1| putative arginine decarboxylase [Bacteroides fragilis NCTC 9343] gi|251948186|gb|EES88468.1| biosynthetic arginine decarboxylase [Bacteroides sp. 3_2_5] gi|263254308|gb|EEZ25742.1| arginine decarboxylase [Bacteroides sp. 2_1_16] gi|301161256|emb|CBW20794.1| putative arginine decarboxylase [Bacteroides fragilis 638R] Length = 630 Score = 58.3 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 112/310 (36%), Gaps = 35/310 (11%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L++L +Q P ++ F A + + Y +K N Sbjct: 42 VDLKELVDELQLRDVAAPMLVRFPDILDNRIEKTAYCFKQASEEYGYKAQNFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIICNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +ELK + + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKMNELKLIARMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L S + + HIGSQ+ +I A + QL + G N++ + Sbjct: 222 SELLEALDFLESKGMKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHAMGFNVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFLV 280 D+GGGLG+ Y S S I +Y + II E GR L Sbjct: 282 DIGGGLGVDYDGTRSSSSESSVNYSIQEYVNDSISTLVDASDKNGIPHPNIITESGRALT 341 Query: 281 ADVGILVTKV 290 A +L+ +V Sbjct: 342 AHHSVLIFEV 351 >gi|167909409|ref|ZP_02496500.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 112] Length = 185 Score = 58.3 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 16/175 (9%) Query: 230 NIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 + H+++GGG H D + ++ E GR + A+ G+ VT+ Sbjct: 15 PVTHLNLGGGFSEKGHDDATFERYR-----ARIAPLAKRYTLVHEAGRAIFANAGVFVTR 69 Query: 290 VISIKKSADKTFVILDVAMNDFMR--------PTLYDAYHEINYIVNPAGDRLHIHADIV 341 V ++K D+ + D M+ T + V Sbjct: 70 VRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAPTLVPAGAADAHRAPNARPITFV 129 Query: 342 GPICETGDFIAL-NRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPEIMVN 394 G C D I R LP+PGD + + GAY + + S ++ + Sbjct: 130 GNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSYTVSGFLSH-KPAQVYIR 183 >gi|145520869|ref|XP_001446290.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124413767|emb|CAK78893.1| unnamed protein product [Paramecium tetraurelia] Length = 318 Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 16/131 (12%) Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVI-------------LDVAMNDFMRPT 315 ++I EPGR A+ L+ ++++ + + +D + + Sbjct: 161 YEVIAEPGRHFSANSCSLLFRILTKRIKHGRLCYHVNESLYHSFNSILMDGISFENLNDQ 220 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAY 374 Y + + D+ + I G C+ D IA N + GD L ++ G+Y Sbjct: 221 FYSVLNSDESQNSQISDQSN--VSIFGMTCDGADVIANNITVPTDMNVGDWLCMQGMGSY 278 Query: 375 GAVQSGTYNSR 385 T+N Sbjct: 279 TIGPKSTFNGM 289 >gi|262193352|ref|YP_003264561.1| arginine decarboxylase [Haliangium ochraceum DSM 14365] gi|262076699|gb|ACY12668.1| arginine decarboxylase [Haliangium ochraceum DSM 14365] Length = 650 Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 85/260 (32%), Gaps = 28/260 (10%) Query: 8 EGSLHA-------ENVSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFD------ 49 +G+L ++ L+ L + TP + + + AF Sbjct: 41 KGNLLITPRGPEHGSIDLKALVEEIKLRGIPTPILLRFSDILRSRIELLNQAFGSAIAEY 100 Query: 50 --GMDTMVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSG 103 Y +K N ++ V++ + G GL+ S+ EL +A + ++ Sbjct: 101 EYRGQYRGVYPIKVNQSRIVVQEIIEFGRPYHYGLEAGSKPELLAVMAVHDDPDALIICN 160 Query: 104 VGKTIDEIDL----ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTH 159 K + I+ + +E E+ ++ A SLG + + R Sbjct: 161 GYKDDEYIETALSASRLGRKVVLVIEKPDEIDHIHSVAQSLGIRPTVGMRARLSARGAGR 220 Query: 160 KKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD 219 + S G + P + ++ S + + H+GSQI I S A + Sbjct: 221 WEQSGGDRSKFGLSPAEMLQAVDKLRSWGQLDGLELLHFHLGSQISSIRSIKTALREAGR 280 Query: 220 LTQQLRSNGHNIQHIDVGGG 239 L +L G GG Sbjct: 281 LFVELHKLGCEGLQYFDVGG 300 >gi|148255000|ref|YP_001239585.1| putative amino acid processing enzyme-like protein [Bradyrhizobium sp. BTAi1] gi|146407173|gb|ABQ35679.1| putative amino acid processing enzyme-related protein (aldolase or racemase) [Bradyrhizobium sp. BTAi1] Length = 359 Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 23/77 (29%), Gaps = 1/77 (1%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GL 78 ++A TP +E+N +K + + + K G+ G+ Sbjct: 8 RIAREYGTPCAVIDMDRVERNIARIQAQCAAAGVANRPHIKTHKSPELAKLQIAAGAQGI 67 Query: 79 DIVSEGELRRALAAPVP 95 GE A + Sbjct: 68 TCQKIGEAEIMAEAGID 84 >gi|329964488|ref|ZP_08301542.1| arginine 2-monooxygenase [Bacteroides fluxus YIT 12057] gi|328524888|gb|EGF51940.1| arginine 2-monooxygenase [Bacteroides fluxus YIT 12057] Length = 630 Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 111/310 (35%), Gaps = 35/310 (11%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L++L +Q P ++ F A + + Y +K N Sbjct: 42 VDLKELVDELQLRDVAAPMLVRFPDILDNRIEKISCCFKQASEEYGYKAENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A + ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIATNMDSDSLIICNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +ELK + + A LG K + R+ + + + S G Sbjct: 162 KMGKRIFLVVEKMNELKLIAKMAKRLGVKPNLGIRIKLASSGSGKWEDSGGDASKFGLSS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + HIGSQI +I A + QL + G ++ + Sbjct: 222 SELLEALDYLVEKNMQDCLKLIHFHIGSQITKIRRIKTALREASQFYVQLHAMGFKVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFLV 280 DVGGGLG+ Y S I +Y + II E GR L Sbjct: 282 DVGGGLGVDYDGTRSSNSEGSVNYSIQEYVNDSISTLVDASDKNGIPHPNIITESGRALT 341 Query: 281 ADVGILVTKV 290 A +L+ +V Sbjct: 342 AHHSVLIFEV 351 >gi|325300120|ref|YP_004260037.1| Biosynthetic arginine decarboxylase [Bacteroides salanitronis DSM 18170] gi|324319673|gb|ADY37564.1| Biosynthetic arginine decarboxylase [Bacteroides salanitronis DSM 18170] Length = 630 Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 71/377 (18%), Positives = 127/377 (33%), Gaps = 44/377 (11%) Query: 16 VSLEKLAHVVQ----T-PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L++L +Q T P ++ SN F + Y +K N Sbjct: 42 VDLKELVDELQLRDVTAPMLVRFPDILDNRIEKISNCFQQAAEEYGYNAQNFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHTVIAINTDSDSLIICNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE ++EL+ + + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKQNELRLIAKIAKQLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + HIGSQ+ +I A + QL G ++ + Sbjct: 222 SELLEALDFIKEKKMEDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLYKMGFPVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFLV 280 D+GGGLG+ Y S S I +Y + II E GR L Sbjct: 282 DIGGGLGVDYDGTRSSNSESSVNYSIQEYVNDSISIMVDASNKNGIPHPNIITESGRSLT 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE--INYIVNPAGDRLHIHA 338 A +L+ +V+ + + LY+ + + ++ D I Sbjct: 342 AHHSVLIFEVLETASLPSMDEEFEVGPDDHELVHELYEIWDNLGQSRMLEAWHDAQQIRE 401 Query: 339 DIVGPICETGDFIALNR 355 E+ D + Sbjct: 402 -------ESLDLFSHGI 411 >gi|255010138|ref|ZP_05282264.1| arginine decarboxylase [Bacteroides fragilis 3_1_12] gi|313147936|ref|ZP_07810129.1| biosynthetic arginine decarboxylase [Bacteroides fragilis 3_1_12] gi|313136703|gb|EFR54063.1| biosynthetic arginine decarboxylase [Bacteroides fragilis 3_1_12] Length = 630 Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 111/310 (35%), Gaps = 35/310 (11%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L++L +Q P ++ F A + + Y +K N Sbjct: 42 VDLKELVDELQLRDVAAPMLVRFPDILDNRIEKTAYCFKQASEEYGYKAQNFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIICNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +ELK + + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKMNELKLIARMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L S + + HIGSQ+ +I A + QL + G ++ + Sbjct: 222 SELLEALDFLESKGMKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHAMGFKVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------------LQCKIILEPGRFLV 280 D+GGGLG+ Y S S I +Y + II E GR L Sbjct: 282 DIGGGLGVDYDGTRSSSSESSVNYSIQEYVNDSISTLVDASDKNGIPHPNIITESGRALT 341 Query: 281 ADVGILVTKV 290 A +L+ +V Sbjct: 342 AHHSVLIFEV 351 >gi|71278090|ref|YP_271044.1| decarboxylase domain-containing protein [Colwellia psychrerythraea 34H] gi|71143830|gb|AAZ24303.1| decarboxylase domain protein [Colwellia psychrerythraea 34H] Length = 171 Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 5/90 (5%) Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + + + Y N + + +IVGPIC D Sbjct: 72 TNYLVCDGGLHHHLANSCNFGQLIRKNYPVAIR-----NKLKEGVQELVNIVGPICNPLD 126 Query: 350 FIALNRKIALPRPGDLLYIEKTGAYGAVQS 379 +A + GD + + ++G Y A S Sbjct: 127 ILADKIMLPKASMGDYVVVFQSGTYVATAS 156 >gi|313246907|emb|CBY35759.1| unnamed protein product [Oikopleura dioica] Length = 141 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 3/88 (3%) Query: 27 TPFY-CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 +P Y + + +A + +A+K N + V+ + G G + S GE Sbjct: 32 SPVLDLYDLEGLRGRFKEVQDALPSWNH--AFAIKTNPIRGVMLEAKNCGLGAEAASIGE 89 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDL 113 L AL +IV+ KT + Sbjct: 90 LEHALQLGFDRSKIVYDSPVKTKAHLKH 117 >gi|170744100|ref|YP_001772755.1| alanine racemase domain-containing protein [Methylobacterium sp. 4-46] gi|168198374|gb|ACA20321.1| alanine racemase domain protein [Methylobacterium sp. 4-46] Length = 359 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 1/78 (1%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-G 77 E++A +P +E+N A D +K + + + + G+ G Sbjct: 6 EEVARTFGSPAVMIDLDRVERNIARLQAACDAAGLANRPHIKTHKSPVLARMQREAGARG 65 Query: 78 LDIVSEGELRRALAAPVP 95 L + GE A + Sbjct: 66 LTCQTLGEAEVMAEAGLD 83 >gi|198274366|ref|ZP_03206898.1| hypothetical protein BACPLE_00511 [Bacteroides plebeius DSM 17135] gi|198272732|gb|EDY97001.1| hypothetical protein BACPLE_00511 [Bacteroides plebeius DSM 17135] Length = 630 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 70/377 (18%), Positives = 122/377 (32%), Gaps = 44/377 (11%) Query: 16 VSLEKLAHVVQ----T-PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L++L +Q T P ++ SN F + Y +K N Sbjct: 42 VDLKELVDELQLRDVTAPMLVRFPDILDNRIEKISNCFTQASEEYGYQAQNFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAINTDSDSLIICNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +EL+ + + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKLNELRLIAKMAKQLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + HIGSQ+ +I A + QL G ++ + Sbjct: 222 SELLEALDFLEKKEMQDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHQLGFPVEFV 281 Query: 235 DVGGGLGIAYHS--------------DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLV 280 D+GGGLG+ Y S II E GR L Sbjct: 282 DIGGGLGVDYDGTRSANSESSVNYSIQEYVNDSISIMVDASNKNNIPHPNIITESGRSLT 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY--IVNPAGDRLHIHA 338 A +L+ +V+ A + + LY + +N ++ D I Sbjct: 342 AHHSVLIFEVLETASLPSMDEDFEVSADDHELVQELYQIWDNLNQSRMLEAWHDAQQIRE 401 Query: 339 DIVGPICETGDFIALNR 355 E+ D + Sbjct: 402 -------ESLDLFSHGI 411 >gi|148243477|ref|YP_001228634.1| arginine decarboxylase [Synechococcus sp. RCC307] gi|166220861|sp|A5GWM2|SPEA_SYNR3 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|147851787|emb|CAK29281.1| Arginine decarboxylase [Synechococcus sp. RCC307] Length = 640 Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 94/255 (36%), Gaps = 23/255 (9%) Query: 14 ENVSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALK 60 ++ L +L +Q+ P +E AF+ Y +K Sbjct: 50 GSLDLVELVEGLQSRDLQLPLLIRFEDILEDRLERLHGAFERAIAQYGYGGHYQGVFPVK 109 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + V++ L G GL+ S+ EL AL+ + ++ K I+ A Sbjct: 110 CNQQRHVVEQLVESGRRWHFGLEAGSKAELLIALSLLDDPKALLICNGYKDQRYIETAIL 169 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E+ + + + +LG I R + T + S+ ++ KFG Sbjct: 170 ARQLGRQPVVVIEQADEVPRIIEASRNLGAAPLIGVRAKLSTRS-TGRWGSSVGEKAKFG 228 Query: 173 IPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 + I + + + + H+GSQI I A + L QL S G + Sbjct: 229 LSIPDLLATVEALRDADLLGDLRLLHFHVGSQICDIAVLKDALQEAGQLYVQLASLGAPM 288 Query: 232 QHIDVGGGLGIAYHS 246 +DVGGGLG+ Y Sbjct: 289 GFLDVGGGLGVDYDG 303 >gi|168015545|ref|XP_001760311.1| predicted protein [Physcomitrella patens subsp. patens] gi|162688691|gb|EDQ75067.1| predicted protein [Physcomitrella patens subsp. patens] Length = 659 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 63/308 (20%), Positives = 106/308 (34%), Gaps = 32/308 (10%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LKANSNQAVIKTLAHLG---- 75 P ++ T AFD T YA +K N ++ +I+ + G Sbjct: 82 PLIIRFPDILKNRMDTLQAAFDRGITRQRYAGRFQGVFPVKCNPDRYLIEEIVSHGRRIN 141 Query: 76 SGLDIVSEGELRRALAAPVPAER--IVFSGVGKTIDEIDLALQSG----IYCFNVESESE 129 GL+ S+ EL +AA A + K + + +AL + +E E Sbjct: 142 FGLEAGSKPELLMVMAAMCNASTTAFLICNGYKDAEYVKMALAARSIGLNTVIVLEQLEE 201 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + L + I R H ++G+K + + Sbjct: 202 LDIVIKMSKQLQIRPVIGVRAKLSTKHAGHWGETSGEKGKFGLSTSEIVQVVKRLRKVDM 261 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI + + + +L G N++ ID+GGGLG+ Y H Sbjct: 262 SDCLQLLHFHIGSQIPSLSIVREGVSEAAHIFCELALMGANMKVIDIGGGLGVDYDGTHS 321 Query: 250 PPSSSDYASLIHQY--------------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 S + +Y Q + E GR LV+ +LV V+S K Sbjct: 322 SSSDMSIGYNMEEYAETVVEAIKEATIQKNVSQPTLCCESGRALVSHHSVLVFDVLSAHK 381 Query: 296 SADKTFVI 303 + Sbjct: 382 NGGSACDR 389 >gi|189459864|ref|ZP_03008649.1| hypothetical protein BACCOP_00494 [Bacteroides coprocola DSM 17136] gi|189433474|gb|EDV02459.1| hypothetical protein BACCOP_00494 [Bacteroides coprocola DSM 17136] Length = 630 Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 109/310 (35%), Gaps = 35/310 (11%) Query: 16 VSLEKLAHVVQ----T-PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 V L++L +Q T P ++ SN F + Y +K N Sbjct: 42 VDLKELVDELQLRDVTAPMLVRFPDILDNRIEKISNCFTLASEEYGYQAQNFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMRPVVEEIISHGKKFNLGLEAGSKPELHAVIAINTDSDSLIICNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +EL+ + + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKLNELRLIAKIAKQLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + HIGSQ+ +I A + QL G ++ + Sbjct: 222 SELLEALDFIEKKEMKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHQLGFPVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQY--------------FGNLQCKIILEPGRFLV 280 D+GGGLG+ Y S S I +Y II E GR L Sbjct: 282 DIGGGLGVDYDGTRSSYSESSVNYSIQEYVNDSISIMVDASNKNNIPHPNIITESGRSLT 341 Query: 281 ADVGILVTKV 290 A +L+ +V Sbjct: 342 AHHSVLIFEV 351 >gi|86158319|ref|YP_465104.1| arginine decarboxylase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774830|gb|ABC81667.1| arginine decarboxylase [Anaeromyxobacter dehalogenans 2CP-C] Length = 654 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 58/318 (18%), Positives = 100/318 (31%), Gaps = 37/318 (11%) Query: 16 VSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 + L + + P + + AF G Y +K N Sbjct: 58 IDLMDVVEDIRERNIGFPCVVRFQDVLRARVKQINEAFGKAVAEMGYGASYFGVYPIKVN 117 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V+ + G+ GL+ S+GEL L E + K + + LA Sbjct: 118 QMREVVDEIVDAGAPYHYGLEAGSKGELLVVLGMNADPEALTICNGYKDEEYLRLALLGR 177 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E SEL L + +G + R T K + KFG+ Sbjct: 178 KLGRKVIVVIEKLSELPQLLRLGEEMGVDPMVGLRSKLTTR-GTGKWEGSSGDFAKFGLT 236 Query: 175 IHQIHSLYAYASTLPGVKI-SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 + ++ + H+GSQ+ +I A + +LR G I++ Sbjct: 237 VPELIQAVRILKEAGKEHCAKLLHFHVGSQLTEIRVVKDAVNEGARVYAKLRKMGLPIEY 296 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLI--------------HQYFGNLQCKIILEPGRFL 279 DVGGGLG+ Y +S + G + ++ E GR + Sbjct: 297 FDVGGGLGVDYVGTRTNDFASSVNYSMDEYVGDVVYNVQRVCMNEGVPEPHLVSESGRAV 356 Query: 280 VADVGILVTKVISIKKSA 297 A ++ V + Sbjct: 357 TAHHSCIIIPVFGHIEIG 374 Score = 43.7 bits (101), Expect = 0.056, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 38/132 (28%), Gaps = 22/132 (16%) Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET---GDFIALNR- 355 + + ++ ++ G+ IV C++ D Sbjct: 473 DQYMANFSLFQSAPDHWAFDQLFPIVPLHRMGEAPTRDTTIVDITCDSDGKIDRFIEGEG 532 Query: 356 -----KIALPRPGD--LLYIEKTGAYGAVQSGTYNSRLLIPE--IMVNGSQFHIIRPRMT 406 + RPG+ L + TGAY + +N + E + V+ Sbjct: 533 VDETLSLHALRPGEPYYLGMFMTGAYQDIMGDMHNLFGRVNEIHVFVDD---------ED 583 Query: 407 FQELIELDSIPA 418 ++ + IP Sbjct: 584 PEDFYIEEVIPG 595 >gi|197122389|ref|YP_002134340.1| arginine decarboxylase [Anaeromyxobacter sp. K] gi|220917171|ref|YP_002492475.1| arginine decarboxylase [Anaeromyxobacter dehalogenans 2CP-1] gi|196172238|gb|ACG73211.1| arginine decarboxylase [Anaeromyxobacter sp. K] gi|219955025|gb|ACL65409.1| arginine decarboxylase [Anaeromyxobacter dehalogenans 2CP-1] Length = 654 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 100/318 (31%), Gaps = 37/318 (11%) Query: 16 VSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 + L + + P + + AF G Y +K N Sbjct: 58 IDLMDVVEDIRERNIGFPCVVRFQDVLRARVKQINEAFGKAVAEMGYGASYFGVYPIKVN 117 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V+ + G+ GL+ S+GEL L + + K + + LA Sbjct: 118 QMREVVDEIVDAGAPYHYGLEAGSKGELLVVLGMNADPDALTICNGYKDEEYLRLALLGR 177 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E SEL L + +G I R T K + KFG+ Sbjct: 178 KLGRKVIVVIEKLSELPQLLRLGEEMGVDPMIGLRSKLTTR-GTGKWEGSSGDFAKFGLT 236 Query: 175 IHQIHSLYAYASTLPGVKI-SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 + ++ + H+GSQ+ +I A + +LR G I++ Sbjct: 237 VPELIQAVRILKEAGKEHCAKLLHFHVGSQLTEIRVVKDAVNEGARVYAKLRKMGLPIEY 296 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLI--------------HQYFGNLQCKIILEPGRFL 279 DVGGGLG+ Y +S + G + I+ E GR + Sbjct: 297 FDVGGGLGVDYVGTRTNDFTSSVNYSMDEYVGDVVYNVQRVCMNEGVPEPHIVSESGRAV 356 Query: 280 VADVGILVTKVISIKKSA 297 A ++ V + Sbjct: 357 TAHHSCIIIPVFGHIEIG 374 Score = 43.7 bits (101), Expect = 0.056, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 38/132 (28%), Gaps = 22/132 (16%) Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET---GDFIALNR- 355 + + ++ ++ G+ IV C++ D Sbjct: 473 DQYMANFSLFQSAPDHWAFDQLFPIVPLHRMGEAPTRDTTIVDITCDSDGKIDRFIEGEG 532 Query: 356 -----KIALPRPGD--LLYIEKTGAYGAVQSGTYNSRLLIPE--IMVNGSQFHIIRPRMT 406 + RPG+ L + TGAY + +N + E + V+ Sbjct: 533 VDETLSLHALRPGEPYYLGMFMTGAYQDIMGDMHNLFGRVNEIHVFVDD---------ED 583 Query: 407 FQELIELDSIPA 418 ++ + IP Sbjct: 584 PEDFYIEEVIPG 595 >gi|119485411|ref|ZP_01619739.1| arginine decarboxylase [Lyngbya sp. PCC 8106] gi|119457167|gb|EAW38293.1| arginine decarboxylase [Lyngbya sp. PCC 8106] Length = 674 Score = 56.8 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 114/341 (33%), Gaps = 34/341 (9%) Query: 14 ENVSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALK 60 ++ L +L + P +E + F + Y +K Sbjct: 76 GSLDLFELVESLKRRNLGLPLLIRFPDILEDRIERLNACFAKAIARYKYPGNYRGVYPVK 135 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL- 115 N + +I+ L G GL+ S+ EL ALA ++ K D I+ A+ Sbjct: 136 CNQERHLIEDLVRFGQPFKFGLEAGSKPELLIALAMLQTPGSLLICNGYKDRDYIETAML 195 Query: 116 --QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 + G V + E + A PI + T KFG+ Sbjct: 196 AQRLGHTPIIVMEQLEEVNIAIEASRHLGIQPILGIRAKLSTKGMGRWCGTTGDRAKFGL 255 Query: 174 PIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 I ++ + ++ + + HIGSQI I A + + +L G N++ Sbjct: 256 TIPEMIQVVEALKLAGLLECLQLLHFHIGSQISSISVIKDAIREASQIYVELSHLGANMK 315 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL-------------QCKIILEPGRFL 279 ++DVGGGLGI Y +S ++ + + +I E GR + Sbjct: 316 YLDVGGGLGIDYDGSKTNFQASKNYNMQNYANDIVAEVKEACEERKVSVPTLISESGRAI 375 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + +LV V+ + A + + +R Sbjct: 376 ASHQSVLVFDVLGTSEVAKNAPPSITKEDHLILRNLTETYQ 416 >gi|30314892|emb|CAD32231.1| MccE protein [Escherichia coli] Length = 521 Score = 56.8 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 106/348 (30%), Gaps = 23/348 (6%) Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ ++ G ++ S E+ A + L V++ Sbjct: 1 MVQIISGKGLYAEVCSVDEM---NLAKRDGFNRIVFDGPLKKTSELLKAIEIGALIEVDN 57 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E K LN+ I R++ + N + + + + S Sbjct: 58 IDECKRLNELCKLHKLTCRIHLRLSHYYDDNLSRFGLSESEAINLLEML---------IS 108 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + + G D+H+GS + E KA +L + + + + S Sbjct: 109 KSEYLILDGFDLHVGSNLPNAEKICKAVIQYHELILRYMPDDGTLNLGSGIPADSFSASS 168 Query: 247 DHRPPSSSDYA------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 D+ P + + I EPGR LV D G + KVIS K Sbjct: 169 DNPTPCPEVFFSSIYDTIKNCFGTVCDKWNYIFEPGRHLVEDFGYFIGKVISTKNRYGVK 228 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALP 360 ++ +N +D + + N D I G C D + + + Sbjct: 229 VAQTNIGINWIPSIRNWDHSFTLFHNHNHISDDKSDEYIIAGFNCFECDCLFPSVILPS- 287 Query: 361 RPGDLLY-IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHI--IRPRM 405 D L+ + GAY + +R L + +I I R Sbjct: 288 NLSDYLFSVRGCGAYDMQTGNQW-TRNLYAVYTITNDVVNISRIHRRE 334 >gi|330996866|ref|ZP_08320735.1| arginine 2-monooxygenase [Paraprevotella xylaniphila YIT 11841] gi|329572309|gb|EGG53968.1| arginine 2-monooxygenase [Paraprevotella xylaniphila YIT 11841] Length = 630 Score = 56.8 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 114/340 (33%), Gaps = 35/340 (10%) Query: 16 VSLEKLAHVV-----QTPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L +L + P ++ F A D + Y +K N Sbjct: 42 VDLRELMDELAIRDMSAPVLVRFPDILDNRIEKTSNCFEKAAKEYDYKGENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A + + K + I+LA Sbjct: 102 QIRPVVEEVISHGKKFNLGLEAGSKPELHAVIAVNTDSASPIICNGYKDHNYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +EL T+ + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKLNELNTIYEVAQKLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + + HIGSQI +I A + QL G++++ + Sbjct: 222 SELLEALDMLEAKGMKDCLKLIHFHIGSQITKIRRIQTALREASQFYIQLHHLGYDVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL--------------QCKIILEPGRFLV 280 D GGGLG+ Y S S I +Y + +I E GR L Sbjct: 282 DCGGGLGVDYDGTRSSNSESSVNYSIQEYVNDCIYTFVDAANKNNLPHPNLITESGRSLS 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 A +L+ +V+ + +Y+ + Sbjct: 342 AHHSVLIMQVLETASLPRMDENFEPSPEAHQLVKDMYEIW 381 >gi|332880970|ref|ZP_08448640.1| arginine 2-monooxygenase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681144|gb|EGJ54071.1| arginine 2-monooxygenase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 630 Score = 56.8 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 114/340 (33%), Gaps = 35/340 (10%) Query: 16 VSLEKLAHVV-----QTPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L +L + P ++ F A D + Y +K N Sbjct: 42 VDLRELMDELAIRDMSAPVLVRFPDILDNRIEKTSNCFEKAAKEYDYKGENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL +A + + K + I+LA Sbjct: 102 QIRPVVEEVISHGKKFNLGLEAGSKPELHAVIAVNTDSASPIICNGYKDHNYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +EL T+ + A L + I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKLNELNTIYEVAQKLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + + HIGSQI +I A + QL G++++ + Sbjct: 222 SELLEALDMLEAKGMKDCLKLIHFHIGSQITKIRRIQTALREASQFYIQLHHLGYDVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL--------------QCKIILEPGRFLV 280 D GGGLG+ Y S S I +Y + +I E GR L Sbjct: 282 DCGGGLGVDYDGTRSSNSESSVNYSIQEYVNDCIYTFVDAANKNNLPHPNLITESGRSLS 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 A +L+ +V+ + +Y+ + Sbjct: 342 AHHSVLIMQVLETASLPRMDENFEPSPEAHQLVKDMYEIW 381 >gi|315226159|ref|ZP_07867947.1| diaminopimelate decarboxylase [Parascardovia denticolens DSM 10105] gi|315120291|gb|EFT83423.1| diaminopimelate decarboxylase [Parascardovia denticolens DSM 10105] Length = 129 Score = 56.8 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLD 79 + +TP+ + T I + ++ + + + +ALKA +++ L G+D Sbjct: 22 ITRSFETPYIIFDFTGIRHAVQEYQHSICLLGNAKLNFALKACYEPDILRLLREEKLGVD 81 Query: 80 IVSEGELRRALAAPVP 95 + S E + A Sbjct: 82 VASSNEFKLAQKIGFD 97 >gi|134098677|ref|YP_001104338.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL 2338] gi|133911300|emb|CAM01413.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL 2338] Length = 212 Score = 56.8 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 64/212 (30%), Gaps = 11/212 (5%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 + + A G + YA +A + + +A G Sbjct: 1 MDPATVRARCRAYQAALPG--AEIAYAGRAFQCREMAALVAGEACRSTCARPGSSPPPWP 58 Query: 92 A--PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 + + SG +C + S + A Sbjct: 59 PAGRLDGSCCTATPNRTASCARRSPRASGAWCSTRSTRS-------TGWARRPPAAKTCC 111 Query: 150 VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIES 209 V P ++ +TH+ ++TG + KFG P+ + P +++ G+ HIGSQI + Sbjct: 112 VTPGVDGHTHRAVTTGVDDQKFGFPLGRAAEAVERVRRQPRLELVGLHCHIGSQITDVGV 171 Query: 210 FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 + A + L ++ GG Sbjct: 172 YEDAVRRLAAFMTEIALRHGTCLRQLNIGGGH 203 >gi|254230297|ref|ZP_04923686.1| carboxynorspermidine decarboxylase [Vibrio sp. Ex25] gi|151937194|gb|EDN56063.1| carboxynorspermidine decarboxylase [Vibrio sp. Ex25] Length = 295 Score = 56.8 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 69/226 (30%), Gaps = 8/226 (3%) Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 P Q L A + G+D + + + LL +++Q Sbjct: 49 YAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDAISEQFG 108 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGI 285 + + +GGG+ + + + ++ LEPG ++ Sbjct: 109 EYLDKLDWVSMGGGVFFTWPG----YDIEKLGLALKAFSEKHGVQMYLEPGEAIITKTTD 164 Query: 286 LVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 LV V+ I ++ KT ++ + +Y+ I A + I C Sbjct: 165 LVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILE----ASENGEHEYVIGSCSC 220 Query: 346 ETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEI 391 GD + G L+I + Y V+ +N + Sbjct: 221 LAGDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVY 266 >gi|149570734|ref|XP_001506306.1| PREDICTED: similar to arginine decarboxylase, partial [Ornithorhynchus anatinus] Length = 142 Score = 56.4 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 1/82 (1%) Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK 370 + P + + + GP C+ + IA ++ + GD L E Sbjct: 11 RRWHRSGVLRVPSPSVQEPHPGQPLYSSSLWGPACDGPEPIAEGLRLPDLQVGDWLTFEN 70 Query: 371 TGAYGAVQSGTYNSRLLIPEIM 392 GAY A + + S I+ Sbjct: 71 MGAYTAGPASPF-SAARPRRIV 91 >gi|220926980|ref|YP_002502282.1| alanine racemase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219951587|gb|ACL61979.1| alanine racemase domain protein [Methylobacterium nodulans ORS 2060] Length = 359 Score = 56.4 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 1/75 (1%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-G 77 E++A +P +E+N A D +K + + + + G+ G Sbjct: 6 EEVARTFGSPAVMIDLDQVERNIARLQAACDAAGLANRPHIKTHKSPVLARLQQEAGARG 65 Query: 78 LDIVSEGELRRALAA 92 L + GE A Sbjct: 66 LTCQTLGEAEVMAEA 80 >gi|325281202|ref|YP_004253744.1| Biosynthetic arginine decarboxylase [Odoribacter splanchnicus DSM 20712] gi|324313011|gb|ADY33564.1| Biosynthetic arginine decarboxylase [Odoribacter splanchnicus DSM 20712] Length = 629 Score = 56.4 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 92/252 (36%), Gaps = 21/252 (8%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 + L++L V+ P ++ SN F + Y +K N Sbjct: 42 IDLKELMEELQVRDVEAPVLLRFPDILDNRIEKISNCFQAAAREYGYSAKNFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + G GL+ S+ EL L+ + E ++ K I+LA Sbjct: 102 QMRPVVEEIVSHGNKFNIGLEAGSKPELHAVLSIDIDDEAMIICNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE ELKT+ + A + K I R+ + + + S G Sbjct: 162 KMGKRIFLVVEKLMELKTIARLAKKMNVKPNIGIRIKLASSGSGKWEESGGDVSKFGVNS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + HIGSQ+ I A K +L+ G+NI + Sbjct: 222 SELLDALDILEKNKMADSLQLIHFHIGSQVTNIRRIKTALKEASQFYVELKRMGYNINFV 281 Query: 235 DVGGGLGIAYHS 246 D+GGGLG+ Y Sbjct: 282 DIGGGLGVDYDG 293 >gi|54778600|gb|AAV39553.1| ornithine decarboxylase [Oryza sativa Japonica Group] Length = 457 Score = 56.4 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 2/113 (1%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F + + + + G YA+K N N A++ LA LG+G D S E+ Sbjct: 63 FNVIDLGEVARLFAAWWRGLRG--VRPYYAVKCNPNPALLGALAGLGAGFDCASRAEMEA 120 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 LA V A+R+V++ K ++ A G+ +SE E+ + + Sbjct: 121 VLALGVAADRVVYANPCKLEPHLEYAAGVGVDLTTFDSEEEVGKIKRCHPGCR 173 >gi|115446149|ref|NP_001046854.1| Os02g0482400 [Oryza sativa Japonica Group] gi|47848622|dbj|BAD22471.1| putative ornithine decarboxylase [Oryza sativa Japonica Group] gi|113536385|dbj|BAF08768.1| Os02g0482400 [Oryza sativa Japonica Group] Length = 457 Score = 56.4 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 2/113 (1%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F + + + + G YA+K N N A++ LA LG+G D S E+ Sbjct: 63 FNVIDLGEVARLFAAWWRGLRG--VRPYYAVKCNPNPALLGALAGLGAGFDCASRAEMEA 120 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 LA V A+R+V++ K ++ A G+ +SE E+ + + Sbjct: 121 VLALGVAADRVVYANPCKLEPHLEYAAGVGVDLTTFDSEEEVGKIKRCHPGCR 173 >gi|116071954|ref|ZP_01469222.1| arginine decarboxylase [Synechococcus sp. BL107] gi|116065577|gb|EAU71335.1| arginine decarboxylase [Synechococcus sp. BL107] Length = 646 Score = 56.4 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 87/254 (34%), Gaps = 21/254 (8%) Query: 14 ENVSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALK 60 ++ L L +++ P +E +AF+ Y +K Sbjct: 48 GSLDLHDLVQELRSRNLSLPLLIRFDDILEDRLERLHSAFERAIAQYGYKGRYQGVFPVK 107 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + V++ L G GL+ S+ EL AL+ + ++ K I+ A Sbjct: 108 CNQQRHVVEELVSCGKRWNFGLEAGSKAELLIALSLLDDPDALLICNGYKDRLYIETAIL 167 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E+ + + + +LG I R + S G K Sbjct: 168 ARRLGRRPVVVIEQPDEVDRIIEASRNLGAAPYIGIRAKLASRSTGRWGSSVGDKAKFGL 227 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + ++ + + HIGSQI+ I A + + +L G + Sbjct: 228 AIPDLLTTVERLREHGLLDDLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMG 287 Query: 233 HIDVGGGLGIAYHS 246 +DVGGGLGI Y Sbjct: 288 FLDVGGGLGIDYDG 301 >gi|168003930|ref|XP_001754665.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694286|gb|EDQ80635.1| predicted protein [Physcomitrella patens subsp. patens] Length = 668 Score = 56.4 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 107/303 (35%), Gaps = 32/303 (10%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LKANSNQAVIKTLAHLG---- 75 P ++ T +AFD Y+ +K N ++ +I+ + G Sbjct: 82 PLIIRFPDIVKNRMDTLQSAFDRGIARHRYSGRFQGVFPVKCNPDRYLIEEIVSHGRYIN 141 Query: 76 SGLDIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIY----CFNVESESE 129 GL+ S+ EL +AA A + + K ++ +++AL + +E E Sbjct: 142 FGLEAGSKPELLLVMAAMCRASNDAFLICNGYKDVEYVEMALVARTMGLNTMIVLEQLEE 201 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + L + I R H ++G+K + + Sbjct: 202 LDIVIKVSNQLQIRPVIGVRAKLSTKHAGHWGETSGEKGKFGLSTSEIVQVVKRLRKVDM 261 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI + + + +L G N+ ID+GGGLG+ Y H Sbjct: 262 SDCLQLLHFHIGSQIPSLSIVREGVSEAAHIFCELALMGANMNVIDIGGGLGVDYDGTHS 321 Query: 250 PPSSSDYASLIHQY--------------FGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 S + +Y Q + E GR LV+ +LV V S K Sbjct: 322 SSSDMSIGYNMEEYAETVVEAIKDATVQKNVKQPILCCESGRALVSHHSVLVFDVFSAHK 381 Query: 296 SAD 298 + Sbjct: 382 NGG 384 >gi|78185739|ref|YP_378173.1| arginine decarboxylase [Synechococcus sp. CC9902] gi|78170033|gb|ABB27130.1| arginine decarboxylase [Synechococcus sp. CC9902] Length = 642 Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 88/254 (34%), Gaps = 21/254 (8%) Query: 14 ENVSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALK 60 ++ L +L +++ P +E +AF+ Y +K Sbjct: 44 GSLDLHELVQELRSRNLSLPLLIRFDDILEDRLERLHSAFERAIAQYGYKGRYQGVFPVK 103 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + V++ L G GL+ S+ EL AL+ + ++ K I+ A Sbjct: 104 CNQQRHVVEELVSCGKRWNFGLEAGSKAELLIALSLLDDPDALLICNGYKDRLYIETAIL 163 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E+ + + + +LG I R + S G K Sbjct: 164 ARRLGRRPVVVIEQPDEVDRIIEASRNLGAAPYIGIRAKLASRSTGRWGSSVGDKAKFGL 223 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + ++ + + HIGSQI+ I A + + +L G + Sbjct: 224 AIPDLLTTVERLRDNGLLDDLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMG 283 Query: 233 HIDVGGGLGIAYHS 246 +DVGGGLGI Y Sbjct: 284 FLDVGGGLGIDYDG 297 >gi|316934654|ref|YP_004109636.1| alanine racemase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315602368|gb|ADU44903.1| alanine racemase domain protein [Rhodopseudomonas palustris DX-1] Length = 360 Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 1/77 (1%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GL 78 K+A V TP +E N D +K + + + K G+ G+ Sbjct: 8 KIAREVGTPALVIDMDRVEHNIARIQALCDAAGVANRPHIKTHKSPLLAKMQIDAGARGI 67 Query: 79 DIVSEGELRRALAAPVP 95 GE A + Sbjct: 68 TCQKLGEAEVMADAGID 84 >gi|296242242|ref|YP_003649729.1| Orn/DAP/Arg decarboxylase 2 [Thermosphaera aggregans DSM 11486] gi|296094826|gb|ADG90777.1| Orn/DAP/Arg decarboxylase 2 [Thermosphaera aggregans DSM 11486] Length = 588 Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 101/316 (31%), Gaps = 25/316 (7%) Query: 14 ENVSLEKLAHVVQ--TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANS 63 E++ + L T Y AI+ + + + +K N Sbjct: 42 ESIRIIDLMKKYGLET-AYIRFLPAIKSAMRRVFETYKTLSQVHGYTGKFQPVFPMKVNP 100 Query: 64 NQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 VI + G G + S GE++ R++ + + + L + Sbjct: 101 IPIVIDAIWKYGEEFNWGFNTGSIGEIKLLHKYLNKGSRLLIYDGVVSDNVLKLLMDFEK 160 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 +NV + E + + + +S + RV P S G + KFG+ I+ + Sbjct: 161 AGWNVIVDVESE-HDLQVLSKYANIHVGLRVKPFYKPGGKWSHSAGLEG-KFGLTINTLL 218 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 L L I + + L NI ID GGG Sbjct: 219 KLIKEYKWLNERAILIHVHGGSQIYELKHIAAIFEEAKTLLNDLRNIGFENISIIDTGGG 278 Query: 240 LGIAYHSDHR-PPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVI 291 + YH + P S +Y + ++ E GR++VA I+V KV+ Sbjct: 279 MAYPYHDSRKGTPESPNYTIVDYINLLIKKFKDAQPHPTLVFEGGRYIVASHRIVVAKVV 338 Query: 292 SIKKSADKTFVILDVA 307 ++ + + + Sbjct: 339 DVRPYSTEYKPFENGN 354 >gi|221105722|ref|XP_002170379.1| PREDICTED: similar to ornithine decarboxylase, partial [Hydra magnipapillata] Length = 127 Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 37/91 (40%) Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +K+N N VI LA LG D S+ E+ L V ERI+F+ K + A + Sbjct: 1 VKSNPNHVVIALLARLGVNFDCASKCEIETVLDMDVDPERIIFANPCKQESHVKYAREKN 60 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFR 149 + +SE EL + + I Sbjct: 61 VRKMTFDSEGELYKIKENFPGAELVIRIKVD 91 >gi|88799147|ref|ZP_01114727.1| arginine decarboxylase [Reinekea sp. MED297] gi|88778130|gb|EAR09325.1| arginine decarboxylase [Reinekea sp. MED297] Length = 635 Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 114/345 (33%), Gaps = 37/345 (10%) Query: 13 AENVSLEKLA-----HVVQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYAL 59 A L +A +Q P + + AF Y + Sbjct: 36 AGQTPLNDIAVAAKAKGLQLPLLVRFPHILHDRVARINEAFKAAIKIENYQNVYQPLYPI 95 Query: 60 KANSNQAVIKTLAH----LG---SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 K N + +++ + G GL+ S+ EL +A + K + I Sbjct: 96 KVNQQRRIVEEIIKGQRLAGTPRIGLEAGSKPELMAVMAEAARGATTIVCNGYKDEEYIR 155 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKED 169 LAL + +V E + + +++ ++ + R+ + K ++G ++ Sbjct: 156 LALSAEKLGHHVYLVVEKISEVEWILNIAEEMNVLPRIGVRARLSSVGKGKWENSGGEKS 215 Query: 170 KFGIPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 KFG+ +I ++ + + + H+GSQI I + +LR Sbjct: 216 KFGLTASEIITITEHLREHDRLDSFQLLHFHLGSQIANIRDIQLGLRECARFYVELRHLN 275 Query: 229 HNIQHIDVGGGL------------GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL-EP 275 I +DVGGGL +S ++ +A L +I+ E Sbjct: 276 VPIDIVDVGGGLGVDYEGTQSRESCSMNYSLQEYANNVVFAFRDACTQEELPHPMIVSES 335 Query: 276 GRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 GR + A +L+T V + + D +R Y Sbjct: 336 GRAVTAHHAVLITDVSEEETPDTRAPDQPDDEAPSLLRELWYCYQ 380 >gi|260435501|ref|ZP_05789471.1| arginine decarboxylase [Synechococcus sp. WH 8109] gi|260413375|gb|EEX06671.1| arginine decarboxylase [Synechococcus sp. WH 8109] Length = 646 Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 86/254 (33%), Gaps = 21/254 (8%) Query: 14 ENVSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALK 60 ++ L +L +++ P +E AF+ Y +K Sbjct: 48 GSLDLVELVSELKSRNLALPLLIRFDDILEDRLEQLHAAFERAIAQYSYPGRYQGVFPVK 107 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + V++ L G GL+ S+ EL AL+ E ++ K I+ A Sbjct: 108 CNQQRHVVEELVSCGKRWNFGLEAGSKAELLIALSLLDDPEALLICNGYKDRLYIETAIL 167 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E+ + + SLG I R + S G K Sbjct: 168 ARRLGRQPVVVIEQPDEVDRIIDASKSLGAAPYIGIRAKLSSRSTGRWGSSVGDKAKFGL 227 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + ++ + + HIGSQI+ I A + + +L G + Sbjct: 228 SIPELLATVERLRENNLLPDLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMG 287 Query: 233 HIDVGGGLGIAYHS 246 +DVGGGLGI Y Sbjct: 288 FLDVGGGLGIDYDG 301 >gi|307293936|ref|ZP_07573780.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1] gi|306880087|gb|EFN11304.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1] Length = 156 Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 273 LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI-------NY 325 E GR L A V +++ +K +TF +L + F P+ + H Sbjct: 9 FECGRILTAYHAAYVCEILDLKFVHGRTFALLRGGTHHFRLPSSWGHNHPFLILPRDAWP 68 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 P + I+ + G +C D +A N + R GDL GAYG Sbjct: 69 HPWPRPECRDINLTLAGELCTPKDVLARNVPVERARIGDLACFLMAGAYG 118 >gi|114319236|ref|YP_740919.1| arginine decarboxylase [Alkalilimnicola ehrlichii MLHE-1] gi|122312750|sp|Q0ACK8|SPEA_ALHEH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|114225630|gb|ABI55429.1| arginine decarboxylase [Alkalilimnicola ehrlichii MLHE-1] Length = 628 Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 114/338 (33%), Gaps = 34/338 (10%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 + L +A + P + + AF Y +K N Sbjct: 44 LDLAGIAAEARHQGLGLPVLVRFLDILHDRVDSLCQAFRQAMVEDGYRGGYRAVYPIKVN 103 Query: 63 SNQAVIKTLAHLG---SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 + V++ + G GL+ S+ EL L A P V K + + LAL+ Sbjct: 104 QQRRVVEEIIRHGNGRVGLEAGSKPELMAVL-ALTPPGGTVVCNGYKDREYVRLALRGRQ 162 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTH---KKISTGKKEDKFGIPIH 176 V E + + + + + + T K +TG ++ KFG+ Sbjct: 163 LGLQVHLVIEKASELELVLEEAAALGVTPSLGMRVRLATIGAGKWQNTGGEKSKFGLTAA 222 Query: 177 QIHSLYAYASTLPG-VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q ++ + + H+GSQI I + + +LR+ G ++ +D Sbjct: 223 QALAVVDRLRAAGCLDWLRLLHFHLGSQIPNIRDIRRGMREAARYYAELRALGAPVETVD 282 Query: 236 VGGGLGIAYHSDH------RPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVAD 282 VGGGLG+ Y + ++YA + II E GR + A Sbjct: 283 VGGGLGVDYEGSRSRSFCSMNYTVAEYAHNVVHALWQVCEDEGLPHPDIITESGRAMTAH 342 Query: 283 VGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 +L+T VI + ++ + L+ + Sbjct: 343 HAVLITDVIDGDRVPGGADLLAPADAAPRVLHELWTVW 380 >gi|162450725|ref|YP_001613092.1| arginine decarboxylase [Sorangium cellulosum 'So ce 56'] gi|161161307|emb|CAN92612.1| arginine decarboxylase [Sorangium cellulosum 'So ce 56'] Length = 647 Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 61/332 (18%), Positives = 113/332 (34%), Gaps = 31/332 (9%) Query: 17 SLEKLAHVVQ--TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQA 66 + A TP + + AF+ + +K N + Sbjct: 55 DVVDAAIEQGLRTPLLIRFQDLLHHRVRALNEAFNRAIAESKFRGTYRGVFPIKVNQLRE 114 Query: 67 VIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 V++ + G G+++ S+ E+ L+ E ++ K + I AL Sbjct: 115 VVEEILDAGKTYHYGVEVGSKPEVFAGLSVHTDPESLIVCNGYKDDNFIRTALIGRKLGK 174 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDIN---ANTHKKISTGKKEDKFGIPIHQIH 179 V +E + + + K+ + + + K ++G + KFG+ +I Sbjct: 175 KVILIAEKLSEVRMITRVAKEMNVEPMIGLRVRLLTEGAGKWKTSGGENAKFGLSTAEIL 234 Query: 180 SLYAYASTLPG-VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + + HIGSQ+ I +A + +LR G I++IDVGG Sbjct: 235 AAIRIMDEAGMSSSFKLLHFHIGSQVPDILIIKRAVREATRYYAKLRKMGQRIEYIDVGG 294 Query: 239 GLGIAYHSDH------RPPSSSDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGI 285 GL I Y S +YA I I+ E GR +VA + Sbjct: 295 GLAIDYDGSRSTFHSSMNYSVEEYARDIVHNIADICDEERVPHPNIVSESGRAIVAHHSV 354 Query: 286 LVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 LV + + + + + + ++ LY Sbjct: 355 LVVQAFGSIEKTPMSPIDIQTEEHKLIQNLLY 386 >gi|288928661|ref|ZP_06422507.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 317 str. F0108] gi|288329645|gb|EFC68230.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 317 str. F0108] Length = 630 Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 75/376 (19%), Positives = 123/376 (32%), Gaps = 44/376 (11%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 + L + V +P ++ F A + V Y +K N Sbjct: 42 IDLRDVMDELALRDVTSPVLLRFPDILDSRIEKTASCFRQAAEEYGYKGENFVIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 Q V++ + G GL+ S+ EL +A ++ ++ K I+LAL + Sbjct: 102 QMQPVVEEIISHGRKFNLGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQ 161 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPI 175 + E + KK + + I ++ + K +G KFG+ Sbjct: 162 KMGKRIFLVIEKLNELELIARAAKKLNVRPNLGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 ++ + + HIGSQI +I A + QL G+++ + Sbjct: 222 SELLQALELLDQKGLRDCLKLIHFHIGSQITKIRRIQTALREASQFYVQLHKMGYDVDFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL--------------QCKIILEPGRFLV 280 D GGGLG+ Y P S S I +Y + II E GR L Sbjct: 282 DCGGGLGVDYDGTRSPSSESSVNYSIQEYVNDCIYTFVDAANKNGIEHPNIITESGRSLT 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN--YIVNPAGDRLHIHA 338 A +LV V+ + + LYD + IN ++ D I Sbjct: 342 AHHSVLVIDVLETATLPEMKEEFEPSENEHQLVKDLYDIWDNINSRSMLEDWHDAEQIRE 401 Query: 339 DIVGPICETGDFIALN 354 E D A Sbjct: 402 -------EALDLFAHG 410 >gi|318040729|ref|ZP_07972685.1| arginine decarboxylase [Synechococcus sp. CB0101] Length = 645 Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 87/254 (34%), Gaps = 21/254 (8%) Query: 14 ENVSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LK 60 ++ L +L + P +E AF+ YA +K Sbjct: 47 GSLDLMELVQGLEGRNLGLPLLIRFDDILEDRLERLHAAFERAIAQYGYAGRYQGVFPVK 106 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + V++ L G GL+ S+ EL AL+ E ++ K I+ A Sbjct: 107 CNQQRHVVEELVSCGRRWHFGLEAGSKAELLIALSLIDDPEALLICNGYKDQRYIETAIL 166 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E++ + + +LG I R + S G K Sbjct: 167 ARRLGRQPVVVIEQADEVERIISASRALGAAPFIGVRAKLSSRSTGRWGSSVGDKAKFGL 226 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + ++ A + + H+GSQI+ I A + + +L G + Sbjct: 227 SIPDLLATVEALRQADLLGDLRLLHFHVGSQINDIAVLKDALQEAGQIYVELTKQGAPMG 286 Query: 233 HIDVGGGLGIAYHS 246 +DVGGGLGI Y Sbjct: 287 FLDVGGGLGIDYDG 300 >gi|168701034|ref|ZP_02733311.1| arginine decarboxylase [Gemmata obscuriglobus UQM 2246] Length = 645 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 69/310 (22%), Positives = 116/310 (37%), Gaps = 36/310 (11%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LKAN 62 + L+ L ++T P T ++ + AF+ YA +K N Sbjct: 53 IDLKDLVDQIRTRGIEPPLLLRFTDILQHRIGEIAGAFERSRKEYGYAGEYHCVYPIKVN 112 Query: 63 SNQAVIKTL----AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS- 117 + V++ + GL+ S+ EL LA + + K + I + + S Sbjct: 113 QQRHVVEEVLSFGKDYNFGLEAGSKPELLAVLALTNGVDTPIICNGFKDDEFIKMVVMSR 172 Query: 118 ---GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +EL+ + + LG + PI RV + + S G + KFG+ Sbjct: 173 KIGKNIIPVVEKFTELELIVKYMEELGVRQPIGVRVKLASRGSGRWRGSAGYRS-KFGLT 231 Query: 175 IHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 + ++ Y + + + H+GSQ+ I A + +L G +++ Sbjct: 232 LTEVLEAYEFLKSKGLGDCLQMTHFHMGSQVSDIRKVKDALSEAARIYVELCRLGAGLKY 291 Query: 234 IDVGGGLGIAYHSDH------RPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLV 280 IDVGGGLGI Y + +YA+ + II E GR LV Sbjct: 292 IDVGGGLGIDYDGSQTAFESSMNYTLQEYANDVVYRIKSVCDEAGVPHPAIISESGRALV 351 Query: 281 ADVGILVTKV 290 A +LV V Sbjct: 352 AYHSVLVFDV 361 >gi|317968210|ref|ZP_07969600.1| arginine decarboxylase [Synechococcus sp. CB0205] Length = 672 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 86/254 (33%), Gaps = 21/254 (8%) Query: 14 ENVSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LK 60 ++ L L + P +E AF+ YA +K Sbjct: 74 GSLDLLDLVQGLEGRSLGLPLLIRFDDILEDRLERLHGAFERAIAQYGYAGRYQGVFPVK 133 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + V++ L G GL+ S+ EL AL+ E ++ K I+ A Sbjct: 134 CNQQRHVVEELVSCGKRWHFGLEAGSKAELLIALSLVDDPEALLICNGYKDQRYIETAIL 193 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E++ + Q + LG I R + S G K Sbjct: 194 ARRLGRQPVVVIEQADEVERIIQASQELGAAPFIGIRAKLSSRSTGRWGSSVGAKAKFGL 253 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + ++ A + + H+GSQI+ I A + + +L G + Sbjct: 254 AIPELLATVEALKKANLLNDLKLLHFHVGSQINDIAVLKDALQEAGQIYVELTKLGAPMG 313 Query: 233 HIDVGGGLGIAYHS 246 +DVGGGLG+ Y Sbjct: 314 FLDVGGGLGVDYDG 327 >gi|25141367|ref|NP_740834.1| hypothetical protein F53F10.2 [Caenorhabditis elegans] gi|20198830|gb|AAM15576.1|U97191_3 Hypothetical protein F53F10.2b [Caenorhabditis elegans] Length = 263 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 6/135 (4%) Query: 22 AHVVQT--PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL-GSGL 78 A + PF+ AIE+ + YA+ N++ + + L++ Sbjct: 48 AARCGSYQPFFVMDVAAIERRLEALRVMLPRVRPN--YAVACNADPVLARVLSNNIDVNF 105 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 ++ + EL V R VF T I A+ +G F VESE ++ + + Sbjct: 106 EVSNTAELELVSM-NVEPSRAVFCSQLMTRKAIKNAVLAGCSTFVVESEKQVTDVMNASP 164 Query: 139 SLGKKAPIAFRVNPD 153 + + Sbjct: 165 EAEIILAVCLPYSTG 179 >gi|298715473|emb|CBJ34056.1| conserved unknown protein [Ectocarpus siliculosus] Length = 139 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 22/49 (44%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 V TP Y Y +++ N + V YA+K+ N+AV++ Sbjct: 89 AAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLF 137 >gi|260910993|ref|ZP_05917631.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 472 str. F0295] gi|260634900|gb|EEX52952.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 472 str. F0295] Length = 630 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 74/359 (20%), Positives = 121/359 (33%), Gaps = 39/359 (10%) Query: 28 PFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKANSNQAVIKTLAHLG---- 75 P ++ F A + D V Y +K N Q V++ + G Sbjct: 59 PVLLRFPDILDSRIEKTASCFRQASEKYDYKGENFVIYPIKVNQMQPVVEEIISHGRKFN 118 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL+ S+ EL +A ++ ++ K I+LAL + + E + Sbjct: 119 LGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFLVIEKLNELE 178 Query: 136 RAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 KK + + I ++ + K +G KFG+ ++ Sbjct: 179 LIARAAKKLNVRPNLGIRIKLASSGSGKWEESGGDASKFGLTSSELLQALELLDQKGLHD 238 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI +I A + QL + G+++ +D GGGLG+ Y P Sbjct: 239 CLKLIHFHIGSQITKIRRIQTALREASQFYVQLHNMGYDVDFVDCGGGLGVDYDGTRSPS 298 Query: 252 SSSDYASLIHQYFGNL--------------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 S S I +Y + II E GR L A +LV V+ Sbjct: 299 SESSVNYSIQEYVNDCIYTFVEAANKNGIDHPNIITESGRSLTAHHSVLVIDVLETASLP 358 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEIN--YIVNPAGDRLHIHADIVGPICETGDFIALN 354 + + LYD + IN ++ D I E+ D A Sbjct: 359 EMKEEFEPSENEHQLVKDLYDIWDNINSRSMLEDWHDAEQIRE-------ESLDLFAHG 410 >gi|33866889|ref|NP_898448.1| arginine decarboxylase [Synechococcus sp. WH 8102] gi|46397729|sp|Q7U3S0|SPEA_SYNPX RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|33639490|emb|CAE08874.1| arginine decarboxylase [Synechococcus sp. WH 8102] Length = 644 Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 85/254 (33%), Gaps = 21/254 (8%) Query: 14 ENVSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALK 60 ++ L +L + P +E AF+ Y +K Sbjct: 46 GSLDLVELVSELRGRNLGLPLLIRFDDILEDRLERLHAAFERAIAQYSYTGRYQGVFPVK 105 Query: 61 ANSNQAVIKTL----AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + V++ L GL+ S+ EL AL+ E ++ K I+ A Sbjct: 106 CNQQRHVVEELVICGKRWNFGLEAGSKAELLIALSLLDDPEALLICNGYKDRLYIETAIL 165 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E+ + + + SLG I R + S G K Sbjct: 166 ARRLGRQPVVVIEQPDEVDRIIEASKSLGAAPYIGVRAKLSSRSTGRWGSSVGDKAKFGL 225 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + ++ + + + HIGSQI+ I A + + +L G + Sbjct: 226 SIPELLATVERLRESNLLPDLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMG 285 Query: 233 HIDVGGGLGIAYHS 246 +DVGGGLGI Y Sbjct: 286 FLDVGGGLGIDYDG 299 >gi|123965287|ref|YP_001010368.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9515] gi|166220852|sp|A2BU00|SPEA_PROM5 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|123199653|gb|ABM71261.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str. MIT 9515] Length = 648 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 110/314 (35%), Gaps = 34/314 (10%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALKAN 62 + L KL + ++ TP ++ +NAF Y +K N Sbjct: 52 IDLFKLVNEIKSREINTPLILRFNDILKDRITELNNAFSQAIETYNYKNIFQGVFPIKCN 111 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL--- 115 + V++ + G GL++ S+ EL L+ + ++ K I++A+ Sbjct: 112 QQKNVLEKIIEYGDYWDFGLEVGSKSELLIGLSLLENKKSLLICNGYKDKKYIEIAILAR 171 Query: 116 -QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E E++ + + +L + R ++ S G Sbjct: 172 KLGKQPIIVIEQIDEVQRIIEAVKNLRSTPILGIRSKLSSKSSGRWGKSVGDNSKFGLSI 231 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + ++ ++ + HIGSQI I A + + +L G +++I Sbjct: 232 PEIMLTIKELKEASLINEMKLLHFHIGSQISDISVIKDALQEASQIFVELSKLGAPMKYI 291 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVA 281 DVGGGLGI + S +YA+ + II E GR +V+ Sbjct: 292 DVGGGLGIDFDGTKTSSNTSTNYSLQNYANDVVATIKDSCEVNNIQHPIIISESGRAIVS 351 Query: 282 DVGILVTKVISIKK 295 +L+ V+ Sbjct: 352 HCSVLIFDVLGTSH 365 >gi|189220118|ref|YP_001940758.1| arginine decarboxylase [Methylacidiphilum infernorum V4] gi|189186976|gb|ACD84161.1| Arginine decarboxylase [Methylacidiphilum infernorum V4] Length = 668 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 85/262 (32%), Gaps = 16/262 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGS--- 76 P + L + AF + +K N + VI+ + GS Sbjct: 68 PLLLRFQDLLRHRVLNLNQAFKEAIEEADYRGKYRAVFPIKVNQLREVIEEIVDAGSPFH 127 Query: 77 -GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL----QSGIYCFNVESESELK 131 GL+ S+ EL ALA +E ++ K +D +E EL Sbjct: 128 HGLEAGSKAELFAALAMLKDSEALLICNGFKDRLFVDSIFLGRKLGKKVIQVLEKVEELD 187 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + I R+ H S+G + + + Sbjct: 188 LVIDGLSRFKVDPIIGVRIQLASKGRGHWAYSSGDEAKFGLSTAELLQVIQRLKENHLSH 247 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI I + +A + +L G IQ+IDVGGGLG+ Y Sbjct: 248 CLQLIHFHIGSQIPDILTIKRAVREAARYYARLYQLGFPIQYIDVGGGLGVDYDGSRSTD 307 Query: 252 SSSDYASLIHQYFGNLQCKIIL 273 SS +Y+ + I Sbjct: 308 SSINYSLQEYARDIVYNIAEIC 329 >gi|332709030|ref|ZP_08429000.1| arginine decarboxylase [Lyngbya majuscula 3L] gi|332352219|gb|EGJ31789.1| arginine decarboxylase [Lyngbya majuscula 3L] Length = 715 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 120/342 (35%), Gaps = 35/342 (10%) Query: 14 ENVSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALK 60 ++ L +L + P + + + + F + +K Sbjct: 106 GSLDLLELVESLKQRNLGLPLLIHFSDILADQIAQLNACFAQAITRYKYPGRYQGVFPVK 165 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL--- 113 N ++ V++ + + G GL++ S+ EL ALA + + ++ K + ++ Sbjct: 166 CNQHRHVVEDVVYFGQPYQFGLEVGSKPELMIALATLLTPDSLIICNGYKDREYLETALL 225 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED-KFG 172 A + G V + E L + V ++ + + + KFG Sbjct: 226 ARRLGHNPIIVLEQLEEVQLIIEVAAELGGITPVLGVRAKLSTQSMGRWGNSVGDRAKFG 285 Query: 173 IPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 + I +I ++ + + HIGSQI I + A + + +L+ G N+ Sbjct: 286 LKIPEILQTIDQLREAGMLESLQLLHFHIGSQISAISAIKDAIREASQIYAELKGLGVNM 345 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY-------------FGNLQCKIILEPGRF 278 Q++DVGGGL + Y +S ++ + +I E GR Sbjct: 346 QYLDVGGGLAVDYDGSKTNFHASKNYNMQNYANDIVAAVKEACEEHQIPAPTLISESGRA 405 Query: 279 LVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + + +L+ V+S ++ + + +R Sbjct: 406 IASHQSVLIFDVLSTSDVESQSPPLATEQDHLIIRNLWETYC 447 >gi|87123488|ref|ZP_01079339.1| Arginine decarboxylase [Synechococcus sp. RS9917] gi|86169208|gb|EAQ70464.1| Arginine decarboxylase [Synechococcus sp. RS9917] Length = 650 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 99/255 (38%), Gaps = 23/255 (9%) Query: 14 ENVSLEKLA-----HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LK 60 ++ L L + P +E AF+ T YA +K Sbjct: 52 GSLDLIDLVAGLQDRNLGLPLLIRFDDILEDRLERLHGAFERAITRYGYAGRYQGVFPVK 111 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + V++ L G GL+ S+ EL AL+ + ++ K I+ A Sbjct: 112 CNQQRHVVEELVSCGKRWHFGLEAGSKAELLIALSLIDDPDALLICNGYKDQRYIETAIL 171 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E++ + + +LG I R + +T + S+ ++ KFG Sbjct: 172 ARRLGRRPVVVIEQADEVQRIIAASEALGAAPLIGIRARL-SSRSTGRWGSSVGEKAKFG 230 Query: 173 IPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 +P+ +I + ++ + H+GSQI+ I A + + +L + G + Sbjct: 231 LPVPEILATVEALREANLLEELRLLHFHVGSQINDIAVVKDALQEASRIYVELHALGAPM 290 Query: 232 QHIDVGGGLGIAYHS 246 ++DVGGGLGI Y Sbjct: 291 GYMDVGGGLGIDYDG 305 >gi|218198899|gb|EEC81326.1| hypothetical protein OsI_24498 [Oryza sativa Indica Group] Length = 424 Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 5/54 (9%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 P + Y I + FD + +A KA SN +++ + G Sbjct: 22 QRFGCPVWAYDADIISQRIAQLR-HFD----TIRFAQKACSNIHILRLMREQGV 70 >gi|226940370|ref|YP_002795444.1| arginine decarboxylase [Laribacter hongkongensis HLHK9] gi|226715297|gb|ACO74435.1| SpeA [Laribacter hongkongensis HLHK9] Length = 632 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 103/301 (34%), Gaps = 27/301 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAH---LGS 76 P +++ FD + Y +K N +AVIK + L Sbjct: 59 PLLVRFPDILQQRARRIIEGFDAAREAWEYPQGYTLLYPVKVNQQEAVIKAIIADTSLPI 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFS---GVGKTIDEIDLALQSGIYCFNVESESELKTL 133 GL+ S+ EL LA P +I + + +E E+E++ + Sbjct: 119 GLEAGSKPELMAVLALARPGCKITCNGYKDREFIRLALIGQKLGHEIFIVIEKEAEVQYV 178 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 A LG + RV + S G+K + + + Sbjct: 179 IDEARRLGIMPNVGLRVRLTSHVAGKWADSGGEKGKFGLSAAQLLSVSRQFIDAGMQDAV 238 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI I + F+ +L G + H+DVGGGLG+ Y H Sbjct: 239 RLLHFHMGSQITNISDYRAGFREALRYFGELCRLGLPLDHLDVGGGLGVDYDGTHSRNDS 298 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 + +YA G ++ E GR L A +L+ V ++K+ D T Sbjct: 299 SVNYTIGEYAETIVSMTREFCDEHGLTCPHVMSESGRALTAHHAVLIMNVTDVEKTNDAT 358 Query: 301 F 301 Sbjct: 359 P 359 >gi|87300759|ref|ZP_01083601.1| arginine decarboxylase [Synechococcus sp. WH 5701] gi|87284630|gb|EAQ76582.1| arginine decarboxylase [Synechococcus sp. WH 5701] Length = 653 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 89/255 (34%), Gaps = 22/255 (8%) Query: 14 ENV-SLEKLAHVVQ----T-PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------L 59 L +L +Q T P +E AF+ YA + Sbjct: 51 GGCLDLVELVQGLQGRDLTLPLLIRFDDILEDRLERLHAAFERAIAQYGYAGRYQGVFPV 110 Query: 60 KANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA- 114 K N + V++ L G GL+ S+ EL AL+ E ++ K I+ A Sbjct: 111 KCNQQRHVVEQLVESGRQWHFGLEAGSKAELLIALSLVDDPEALLICNGYKDQRYIETAI 170 Query: 115 ---LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF 171 +E E++ + + LG I R + S G++ Sbjct: 171 LARRLGRQPVVVIEQPDEVERIITASRELGAAPLIGVRAKLASRSTGRWGSSVGERAKFG 230 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 + ++ A ++ + H+GSQI+ I A + + QL G + Sbjct: 231 LSVPDLLATVEALRQADLLGELRLLHFHVGSQINDIAVLKDALQEAGQIYVQLAELGAPM 290 Query: 232 QHIDVGGGLGIAYHS 246 ++DVGGGLGI Y Sbjct: 291 GYLDVGGGLGIDYDG 305 >gi|16332143|ref|NP_442871.1| arginine decarboxylase [Synechocystis sp. PCC 6803] gi|15214309|sp|P74576|SPEA1_SYNY3 RecName: Full=Biosynthetic arginine decarboxylase 1; Short=ADC 1 gi|1653772|dbj|BAA18683.1| arginine decarboxylase [Synechocystis sp. PCC 6803] Length = 695 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 113/349 (32%), Gaps = 44/349 (12%) Query: 14 ENVSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVC--------YALK 60 + L +L + P + + + AF Y +K Sbjct: 82 GALDLYELVKGLRQRNIGLPLLLRFSDILADRINRLNAAFARGIARYRYPNTYRGVYPIK 141 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 N ++ ++++L G GL+ S+ EL ALA P E + + + Sbjct: 142 CNQHRHIVESLVRYGTPYNFGLEAGSKPELMIALAMLQPQENPEPDQQNQPLLICNGYKD 201 Query: 117 SGIYCFNVESESELKTL-------NQRAVSLGKKAPIAFRVNPDINA-----NTHKKIST 164 + + + A+++ + + + + A + + Sbjct: 202 REYIETALLARRLGHRPIIVVEQVAEVALAIEISSNLGIKPILGVRAKLSTQGMGRWGIS 261 Query: 165 GKKEDKFGIPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 KFG+ I ++ + + + + HIGSQI I +A + Q Sbjct: 262 TGDRAKFGLTIPEMLTAIEQLRRADMLDSLQLLHFHIGSQISSISVIKEAMTEASQIFVQ 321 Query: 224 LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG-------------NLQCK 270 L G N++++DVGGGLG+ Y +S ++ + Sbjct: 322 LAKLGANMRYLDVGGGLGVDYDGSKTNFYASKNYNIQNYVNDVISAVQDACVAAEVPCPV 381 Query: 271 IILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 +I E GR + + +L+ V++ + + +R + Sbjct: 382 LISESGRAIASHQSVLIFDVVATNDIN-PPLPKVKGKDHAILRNLMETW 429 >gi|288800991|ref|ZP_06406447.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 299 str. F0039] gi|288331925|gb|EFC70407.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 299 str. F0039] Length = 630 Score = 54.4 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 110/340 (32%), Gaps = 35/340 (10%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 + L+++ + V TP ++ F A D + Y +K N Sbjct: 42 IDLKEVMNELALRDVTTPVLLRFPDILDNRIEQTASCFQQAKKEYDYKAENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 Q V++ + G GL+ S+ EL +A ++ ++ K I+LAL + Sbjct: 102 QMQPVVEEIISHGRKFNLGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQ 161 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPI 175 + E + KK + + I ++ + K +G KFG+ Sbjct: 162 KMGKRIFIVIEKLNELEIIAKAAKKLNVKPNLGIRIKLASSGSGKWEESGGDASKFGLTS 221 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 ++ + + HIGSQI +I A + L G+N+ + Sbjct: 222 SELLEALRILDEKGLHNSLRLIHFHIGSQITKIRRIQTALREAAQFYINLHKMGYNVDFV 281 Query: 235 DVGGGLGIAYHS--------------DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLV 280 D GGGLG+ Y II E GR L Sbjct: 282 DCGGGLGVDYDGTRSPSSESSVNYTIQEYVNDCVYTFVDAANKNNIQHPNIITESGRSLA 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 A +LV V+ + + + LYD + Sbjct: 342 AHHSVLVIDVLETASLPRMSEEFEPTETDHQLVKDLYDIW 381 >gi|317504275|ref|ZP_07962265.1| arginine 2-monooxygenase [Prevotella salivae DSM 15606] gi|315664645|gb|EFV04322.1| arginine 2-monooxygenase [Prevotella salivae DSM 15606] Length = 630 Score = 54.1 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 105/340 (30%), Gaps = 35/340 (10%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L + V P ++ F A D + Y +K N Sbjct: 42 VDLRDVMDELALRDVTAPVLLRFPDILDNRIEKTFSCFQKAKREYDYKAENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 Q V++ + G GL+ S+ EL +A ++ ++ K I+LA+ + Sbjct: 102 QMQPVVEEIISHGQKFNLGLEAGSKPELHAVIAVQCKSDSLIICNGYKDESYIELAMLAQ 161 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPI 175 + E KK + + I ++ + K +G KFG+ Sbjct: 162 KMGKRIFIVVEKLNELDIIAHAAKKLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTS 221 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 ++ + + + HIGSQI +I A + L G NI + Sbjct: 222 SELLEALDKLDAMGMHDCLRLIHFHIGSQITKIRRIQTALREAAQFYVNLHKMGFNIDFV 281 Query: 235 DVGGGLGIAYHS--------------DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLV 280 D GGGLG+ Y II E GR L Sbjct: 282 DCGGGLGVDYDGTRSSSSESSVNYSIQEYVNDCVYMFVDAANKNDIQHPNIITESGRSLA 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 A +LV V+ + + + LYD + Sbjct: 342 AHHSVLVIDVLEAASLPEMNEDFEPKESDHQLVKDLYDIW 381 >gi|298242855|ref|ZP_06966662.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963] gi|297555909|gb|EFH89773.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963] Length = 370 Score = 54.1 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 1/70 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP +EKN ++++ + +K + + K G+ G+ Sbjct: 10 EVDTPALLVDLARLEKNIRRYADSAAKARVRLRPHIKTHKTLEIAKMQLQAGAGGITAAK 69 Query: 83 EGELRRALAA 92 GE A Sbjct: 70 LGEAEVFAEA 79 >gi|219114479|ref|XP_002176410.1| ornithine decarboxylase [Phaeodactylum tricornutum CCAP 1055/1] gi|217402656|gb|EEC42646.1| ornithine decarboxylase [Phaeodactylum tricornutum CCAP 1055/1] Length = 564 Score = 54.1 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 7/65 (10%) Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEK---TGAYGAVQSGTYN 383 + A + + + GP C+ D + + + L D L G G + +N Sbjct: 492 ADFAEETSVQLSTVWGPTCDGLDKVCTDIPLPLLHRDDWLVFPNIKSVG--GLCTA--FN 547 Query: 384 SRLLI 388 Sbjct: 548 GFDPP 552 >gi|15603247|ref|NP_246321.1| arginine decarboxylase [Pasteurella multocida subsp. multocida str. Pm70] gi|48474635|sp|Q9CL60|SPEA_PASMU RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|12721756|gb|AAK03466.1| SpeA [Pasteurella multocida subsp. multocida str. Pm70] Length = 644 Score = 54.1 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 122/337 (36%), Gaps = 33/337 (9%) Query: 16 VSLEKLAHVVQT------PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 VSL LA VQ P I+ + + AF + + Y +K Sbjct: 55 VSLAALAEKVQREQGAHLPTLFCFPQIIQHRLRSINQAFKRAREDFGYEGNYFLVYPIKV 114 Query: 62 NSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 N ++ ++++L G GL+ S+ EL LA + ++ K + + AL Sbjct: 115 NQHRRIVESLISSGQPLGLEAGSKAELMAVLAHAGITQTVIVCNGYKDREYVRFALMGEK 174 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIH 176 V E + Q + K + R+ + + K S+G ++ KFG+ Sbjct: 175 LGHKVYLVIEKLSEIQLVLEEAAKLNVKPRLGVRARLASQGSGKWQSSGGEKSKFGLSAS 234 Query: 177 QIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q+ SL + + + H+GSQ+ I + +L G NIQ D Sbjct: 235 QVLSLVQMLKEHECLDCLQLLHFHLGSQLGNIRDVATGVRESARFYVELHKLGVNIQCFD 294 Query: 236 VGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVAD 282 VGGGLG+ Y + ++YA + G II E GR + A Sbjct: 295 VGGGLGVDYEGNRTQSDCSVNYGLNEYADTVVWGIGQACREHGLPHPTIITESGRGVTAH 354 Query: 283 VGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 +LV+ VI +++ +T + Sbjct: 355 HAVLVSNVIGVERYKFETLAAPAKDAPSVLHSMWETW 391 >gi|226227457|ref|YP_002761563.1| biosynthetic arginine decarboxylase [Gemmatimonas aurantiaca T-27] gi|226090648|dbj|BAH39093.1| biosynthetic arginine decarboxylase [Gemmatimonas aurantiaca T-27] Length = 652 Score = 54.1 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 75/338 (22%), Positives = 118/338 (34%), Gaps = 34/338 (10%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 + L LA VQ P + + T S F Y +K N Sbjct: 57 LDLRDLAADLEGQGVQLPILLRFSDILRSRIETLSERFGAAIREFEYTGGYTTVYPIKVN 116 Query: 63 SNQAVIKTLAH----LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ-- 116 + V++ + G GL+ S+ EL+ L E ++ K + + LAL Sbjct: 117 QQRHVVEEIVRFGKTHGVGLECGSKPELQAVLGLSHSTEHLIVCNGYKDHEFMRLALMGQ 176 Query: 117 --SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E SEL L + A LG R+ S G+K Sbjct: 177 KLGHTVFIVLEQVSELDVLLEVADELGVTPTCGVRIKLASEGAGRWAQSGGEKSKFGLSS 236 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 I + + + + H+GSQI I + + +LR+ G +I H+ Sbjct: 237 AELIKLIDKLQAANRLDILKLIHFHLGSQITDIRFIKSGLQEVARFYLELRAVGVDITHV 296 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVA 281 DVGGGLGI Y + + +YA+ + II E GR L A Sbjct: 297 DVGGGLGIDYDGTNSTNNASVNYTLQEYANDVVYTIAEACREAELSMPHIISESGRALTA 356 Query: 282 DVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 +L+ KVI ++ A++ LD + + D Sbjct: 357 HHALLLIKVIDVESQAEQPIPALDDDDHSLLHEMYEDW 394 >gi|254526034|ref|ZP_05138086.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9202] gi|221537458|gb|EEE39911.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9202] Length = 648 Score = 54.1 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 107/314 (34%), Gaps = 34/314 (10%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAF----DGMDTMVCY----ALKAN 62 + L KL ++ TP ++ +AF Y +K N Sbjct: 52 IDLFKLVRELKSREINTPLIIRFNDILKDRINALHDAFLKAIKTYKYKNIYQGVFPVKCN 111 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + GS GL++ S+ EL LA ++ K I++A Sbjct: 112 QQKNVLEKIIEFGSPWNFGLEVGSKSELLIGLALLENQNSLLICNGYKDKKYIEIATLAR 171 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E + E+K + + L I R ++ S G Sbjct: 172 KLGKNPIIVIEQKDEVKRIIEAVQDLNASPLIGIRAKLSSKSSGRWSKSVGDNSKFGLSI 231 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + ++ ++ + HIGSQI I A + + +L G +++I Sbjct: 232 PEIMSTIKELKEANLINEMRLLHFHIGSQISDIAVIKDALQEASQIYVELCKLGAPMKYI 291 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVA 281 DVGGGLGI + S +YA+ + II E GR +++ Sbjct: 292 DVGGGLGIDFDGTKTSSNTSTNYSLQNYANDVIATIKDSCELNNIEHPTIISESGRAIIS 351 Query: 282 DVGILVTKVISIKK 295 +L+ V+ Sbjct: 352 HCSVLIFNVLGTSH 365 >gi|254432871|ref|ZP_05046574.1| arginine decarboxylase [Cyanobium sp. PCC 7001] gi|197627324|gb|EDY39883.1| arginine decarboxylase [Cyanobium sp. PCC 7001] Length = 655 Score = 54.1 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 90/254 (35%), Gaps = 21/254 (8%) Query: 14 ENVSLEKLAHVVQ----T-PFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALK 60 ++ L +L +Q T P +E AF+ Y +K Sbjct: 47 GSLDLVELVRELQGRDLTLPLLIRFDDILEDRLERLHAAFERAIAQYGYTGRYQGVFPVK 106 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + V++ L G GL+ S+ EL AL+ E ++ K I+ A Sbjct: 107 CNQQRHVVEQLVESGRRWHFGLEAGSKAELLIALSLVDDPEALLICNGYKDRRYIETAIL 166 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E++ + + LG I R + S G++ Sbjct: 167 ARRLGRQPVVVIEQADEVERIIHASRELGAAPLIGVRAKLSSRSTGRWGSSVGERAKFGL 226 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + ++ A ++ + HIGSQI+ I A + + +L G + Sbjct: 227 SVPDLLATVEALRQAGLLPELRLLHFHIGSQINDIAVLKDALQEAGQIYGELTRLGAPMG 286 Query: 233 HIDVGGGLGIAYHS 246 ++DVGGGLGI Y Sbjct: 287 YLDVGGGLGIDYDG 300 >gi|307151103|ref|YP_003886487.1| arginine decarboxylase [Cyanothece sp. PCC 7822] gi|306981331|gb|ADN13212.1| arginine decarboxylase [Cyanothece sp. PCC 7822] Length = 684 Score = 54.1 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 116/348 (33%), Gaps = 41/348 (11%) Query: 14 ENVSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALK 60 ++ L +L + P + + + F Y +K Sbjct: 76 GSLDLYELVESLRRRNIGLPLLIRFSDILADRIERLNACFAKAIARYNYPNVYRGVYPIK 135 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 N ++ ++++L G GL+ S+ EL ALA PAE + I + Sbjct: 136 CNQHRHIVESLVRYGKPFQFGLEAGSKPELMIALATLEPAENPQNNQSPLLICNGYKDRE 195 Query: 117 SGI-----YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA-----NTHKKISTGK 166 ++ ++ L + +++ + + A + ++ Sbjct: 196 YIETALLATRIGLKPIIVIEQLKEVDIAIEISRQFGIKPILGVRAKLSSKGIGRWGNSSG 255 Query: 167 KEDKFGIPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + KFG+ I +I ++ + + + H+GSQI I A + + +L Sbjct: 256 ERAKFGLTIPEILAVVHRLQASEMLDCLQLLHYHVGSQISSITVVKDAIREAAQIYGELV 315 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF-------------GNLQCKII 272 + G ++Q++DVGGGLG+ Y S ++ + +I Sbjct: 316 NLGASMQYLDVGGGLGVDYDGSKTNFYVSKNYNMQNYANDIVAEVQEACAERNIAAPVLI 375 Query: 273 LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 E GR + A +L+ V+ + + + +R Sbjct: 376 SESGRAITAHHSVLIFDVLGSSEVPRTPSLPGTEKEHLIVRNIRETYN 423 >gi|269837824|ref|YP_003320052.1| alanine racemase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269787087|gb|ACZ39230.1| alanine racemase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 370 Score = 54.1 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 1/66 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 V TP A+E+N + F + K + + + G+ G+ Sbjct: 14 DEVDTPALVIDADAMERNIARMAAFFAERPAKLRPHAKTHKSPIIAHKQLEAGAVGITCA 73 Query: 82 SEGELR 87 GE Sbjct: 74 KLGEAE 79 >gi|294675257|ref|YP_003575873.1| arginine 2-monooxygenase [Prevotella ruminicola 23] gi|294473439|gb|ADE82828.1| arginine 2-monooxygenase [Prevotella ruminicola 23] Length = 630 Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 72/345 (20%), Positives = 119/345 (34%), Gaps = 32/345 (9%) Query: 28 PFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKANSNQAVIKTLAHLG---- 75 P ++ F A + D V Y +K N Q V++ + G Sbjct: 59 PVLLRFPDILDNRIEKTWSCFKKASEEYDYKGENYVVYPIKVNQMQPVVEEIISHGRKFN 118 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL+ S+ EL +A ++ I+ K I+LAL + + E + Sbjct: 119 LGLEAGSKPELHAVIAMQCQSDSIIICNGYKDQSYIELALLAQKMGKQIFIVVEKMNELE 178 Query: 136 RAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 KK I + I ++ + K +G KFG+ ++ + Sbjct: 179 IIAREAKKMNIRPNIGIRIKLASSGSGKWEESGGDASKFGLTSAELLEALDFLEKKGLND 238 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI +I A + QL G+N+ +D GGGLG+ Y P Sbjct: 239 CLRLIHFHIGSQITKIRRIQTALREASQFYIQLHKMGYNVDFVDCGGGLGVDYDGTRSPS 298 Query: 252 SSSDYASLIHQYFGNL--------------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 S S I +Y + II E GR L A +LV V+ Sbjct: 299 SESSVNYSIQEYVNDCIYTFVEAANKNGLPHPNIITESGRSLAAHHSVLVIDVLETASLP 358 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHE--INYIVNPAGDRLHIHADI 340 + A + + LY+ + ++ D I ++ Sbjct: 359 EMPEEFEPDANSHQLVKDLYEIWDNLSPRNVLEDWHDAEQIREEV 403 >gi|270158389|ref|ZP_06187046.1| arginine decarboxylase [Legionella longbeachae D-4968] gi|289163366|ref|YP_003453504.1| biosynthetic arginine decarboxylase [Legionella longbeachae NSW150] gi|269990414|gb|EEZ96668.1| arginine decarboxylase [Legionella longbeachae D-4968] gi|288856539|emb|CBJ10334.1| putative biosynthetic arginine decarboxylase [Legionella longbeachae NSW150] Length = 632 Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 107/320 (33%), Gaps = 34/320 (10%) Query: 15 NVSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L+ + P S + AF + + Y +K Sbjct: 40 GVELQAIVDAASRAGLHLPLLIRSPDILHDRVHRIYEAFTQAKEENEYAGNYKLVYPIKV 99 Query: 62 NSNQAVIKTLAH---LGSGLDIVSEGELRRAL-AAPVPAERIVFSGVGKTIDEIDLALQS 117 N Q+V++ L GL+ S+ EL + E + K I AL + Sbjct: 100 NQEQSVVRELLKSPNHTIGLEAGSKPELMAVIGMLSNHQESTIVCNGYKDSYYIRTALIA 159 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIP 174 V E + + + I + I+ + K TG + KFG+ Sbjct: 160 QQMGHKVFIVIEKISELAIILKESARLNIKPTLGVRIRLISKSAGKWEHTGGVKSKFGLN 219 Query: 175 IHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 Q+ L A + + + H+GSQI I + + +LR I Sbjct: 220 AKQVLELIAQLKAHDMLDCLQLMHCHLGSQIANIHDIRHCMQEVSRYYVELRQLNAPIDT 279 Query: 234 IDVGGGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLV 280 IDVGGGL + Y H S +YA+ I Q + + II E GR L Sbjct: 280 IDVGGGLSVDYEGTHSNQGCSMNYSLHEYATHILLAIQYLCQEYNVPEPNIISESGRALT 339 Query: 281 ADVGILVTKVISIKKSADKT 300 A +L+ + I+ + Sbjct: 340 AHHAVLIADISDIEIIHKQP 359 >gi|16329179|ref|NP_439907.1| arginine decarboxylase [Synechocystis sp. PCC 6803] gi|15214305|sp|P72587|SPEA2_SYNY3 RecName: Full=Biosynthetic arginine decarboxylase 2; Short=ADC 2 gi|1651659|dbj|BAA16587.1| arginine decarboxylase [Synechocystis sp. PCC 6803] Length = 659 Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 113/350 (32%), Gaps = 44/350 (12%) Query: 14 ENVSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALK 60 ++ L +L + P + + ++ F Y +K Sbjct: 60 GSLDLLELVEALRQRKLGLPLLIRFSDILADRLERLNSCFAKAIARYNYPNTYQAVYPVK 119 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPA--------ERIVFSGVGKTI 108 N + +++ L G GL+ S+ EL ALA P + ++ K Sbjct: 120 CNQQRHLVEALVRFGQTSQCGLEAGSKPELMIALATLPPPLDRQDKHTKPLIICNGYKDQ 179 Query: 109 DEID------LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKI 162 D ++ I E E + +++ + R++ ++ Sbjct: 180 DYLETALLAKRLGHRPIIIIEQLRELEWVLHISQQLNIKPMLGVRARLSCQSLKSSEISS 239 Query: 163 STGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ 222 G + + ++ + + H+G+Q+ I +A + L Sbjct: 240 GNGDRAKLGLTMPDIVTVIHRLEENNCLDCLKMLHFHLGTQVSDIALIKEAMREASQLYV 299 Query: 223 QLRSNGHNIQHIDVGGGLGIAYH------SDHRPPSSSDYASLIHQYFGNLQ-------C 269 +L G +++++VGGGL + Y + + +YA+ I + Sbjct: 300 ELVKLGAKMRYLNVGGGLAVDYDGSKTNYPASKNYNMQNYANDIVAAIQDACELGQVSPP 359 Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 ++ E GR ++A +LV V+ ++ D + ++ Sbjct: 360 ILVSESGRAIMAHQSVLVFDVLGSNQTGFSEPHPPDENAHPLLKNLWECY 409 >gi|220936281|ref|YP_002515180.1| arginine decarboxylase [Thioalkalivibrio sp. HL-EbGR7] gi|219997591|gb|ACL74193.1| arginine decarboxylase [Thioalkalivibrio sp. HL-EbGR7] Length = 627 Score = 53.7 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 110/319 (34%), Gaps = 35/319 (10%) Query: 15 NVSLEKLAH------VVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALK 60 V L +LA P + AFD + Y +K Sbjct: 43 GVDLFELAQSLRESGQSSLPVLIRFQDILTDRVHRLRQAFDNARAETGFTGNYTAVYPIK 102 Query: 61 ANSNQAVIKTLAHLG---SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 N ++V++ + G GL+ S+ EL L A ++ K + + LAL Sbjct: 103 VNQQRSVVEQILEAGGDRVGLEAGSKPELMAVL-ALSRPGGVIVCNGYKDREYLRLALIG 161 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIP 174 + V E + + + + + + + K +TG ++ KFG+ Sbjct: 162 RLLGHRVYIVIEKPSELDGVMEAARDLGVRPMLGMRVRLASIGKGKWQNTGGEKAKFGLS 221 Query: 175 IHQIHSLYAYASTLPGVKISG-VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 Q L + + H+GSQI I +LR G +IQ Sbjct: 222 ASQSLKLLERLRDADMLDCMQLLHFHMGSQIANIRDIQAGMGEAGRFYAELRRLGADIQV 281 Query: 234 IDVGGGLGIAYHSDH------RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLV 280 +D GGGLG+ Y S +YA + + +I E GR L Sbjct: 282 VDAGGGLGVDYEGSRSRNDCSMNYSLQEYANNIVRGIMNTCREYDLPHPQIFTESGRALT 341 Query: 281 ADVGILVTKVISIKKSADK 299 A +LVT VI +++ ++ Sbjct: 342 AHHAVLVTNVIDTERAPEQ 360 >gi|300865387|ref|ZP_07110196.1| arginine decarboxylase [Oscillatoria sp. PCC 6506] gi|300336622|emb|CBN55346.1| arginine decarboxylase [Oscillatoria sp. PCC 6506] Length = 655 Score = 53.7 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 111/341 (32%), Gaps = 34/341 (9%) Query: 14 ENVSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALK 60 ++ L L + P + +E ++ F Y +K Sbjct: 66 GSLDLYDLVESLKQRSLGLPLLIRFSDILEDRIERLNSCFAKAIARYNYKNVYRGVFPVK 125 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL--- 113 N ++ +++ L G GL+ S+ EL ALA ++ K + ++ Sbjct: 126 CNQHRHLVEDLVRFGQPHYFGLEAGSKPELMIALATLKTPGAMLICNGYKDREYVETAIL 185 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 A + G V + E L A P+ ++ KFG+ Sbjct: 186 AQRLGQTSVIVLEQIEEVQLAIEAGKALGIKPVLGVRAKLSTKGIGHWGNSTGDRAKFGL 245 Query: 174 PIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 I +I + + + + HIGSQI I +A + + +L G N++ Sbjct: 246 TIPEIMRAVDELRSAEMLDCLQLLHFHIGSQISSISIIKEAIREASHIYVELAKLGANMK 305 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN-------------LQCKIILEPGRFL 279 ++DVGGGLG+ Y +S ++ + +I E GR + Sbjct: 306 YLDVGGGLGVDYDGSKTNFHASKNYNMQNYANDVVAGVKDACDERKLPVPILISESGRAI 365 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + +L+ V+ + + + R Sbjct: 366 ASHQSVLIFDVLGTSDVPREIVEPVGEDEHLIPRNLYEIYQ 406 >gi|242399214|ref|YP_002994638.1| putative amino acid racemase [Thermococcus sibiricus MM 739] gi|242265607|gb|ACS90289.1| putative amino acid racemase [Thermococcus sibiricus MM 739] Length = 375 Score = 53.7 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 23/294 (7%), Positives = 65/294 (22%), Gaps = 8/294 (2%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + TP +E N + + + +K + + V G+ G Sbjct: 4 IQELPTPLVVVDLDKLEFNIKEVAKEAKKHNKQLFPMVKTHKSVYVANLQKKAGAGGFLC 63 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 + E A + E ++ + + + V + + + Sbjct: 64 GTIDEAEALAEAGL-GETLMLAYPIMDKENFSRVARLIEDGLRVIFRIDSVDAAEFLDAE 122 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFG------IPIHQIHSLYAYASTLPGVKIS 194 KK + ++ + +K F + + Sbjct: 123 LKKRGLRAEFTIIVDTGGVRYGIEPEKVGNFAKRVKEYSNLEFVGITTHPGHVYNATNPK 182 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 V ++ ++ + + + D+ + + Sbjct: 183 EVKAIAEQATKGMKIALRSLRQWNMNPEIVGIGSTPTFRFDIEEEIYTHLFPGNYVYYDR 242 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 A + I + G + + DK + + Sbjct: 243 QQALIFGSANLERCALTIFVTVTSIAERCGKRFGLINAGSLYFDKRGHEILGSF 296 >gi|163803044|ref|ZP_02196930.1| carboxynorspermidine decarboxylase [Vibrio sp. AND4] gi|159173218|gb|EDP58047.1| carboxynorspermidine decarboxylase [Vibrio sp. AND4] Length = 121 Score = 53.7 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 22/65 (33%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP++ + + +N D + ALK S V + G Sbjct: 4 EQLKTPYFMINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGSTSSG 63 Query: 83 EGELR 87 E+R Sbjct: 64 PFEVR 68 >gi|157412394|ref|YP_001483260.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9215] gi|166979641|sp|A8G243|SPEA_PROM2 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|157386969|gb|ABV49674.1| Orn/DAP/Arg decarboxylase family 2 [Prochlorococcus marinus str. MIT 9215] Length = 648 Score = 53.7 bits (127), Expect = 7e-05, Method: Composition-based stats. Identities = 59/314 (18%), Positives = 106/314 (33%), Gaps = 34/314 (10%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAF----DGMDTMVCY----ALKAN 62 + L KL ++ TP ++ +AF Y +K N Sbjct: 52 IDLFKLVRELKSREINTPLIIRFNDILKDRINALHDAFLKAIKTYKYKNIYQGVFPVKCN 111 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + GS GL++ S+ EL LA ++ K I++A Sbjct: 112 QQKNVLEKIIEFGSPWNFGLEVGSKSELLIGLALLENQNSLLICNGYKDKKYIEIATLAR 171 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E + E+ + + L I R ++ S G Sbjct: 172 KLGKNPIIVIEQKDEVNRIIEAVQDLNASPLIGIRAKLSSKSSGRWSKSVGDNSKFGLSI 231 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + ++ ++ + HIGSQI I A + + +L G +++I Sbjct: 232 PEIMSTIKELKEANLINEMRLLHFHIGSQISDIAVIKDALQEASQIYVELFKLGAPMKYI 291 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVA 281 DVGGGLGI + S +YA+ + II E GR +++ Sbjct: 292 DVGGGLGIDFDGTKTSSNTSTNYSLQNYANDVIATIKDSCELNNIEHPTIISESGRAIIS 351 Query: 282 DVGILVTKVISIKK 295 +L+ V+ Sbjct: 352 HCSVLIFNVLGTSH 365 >gi|159902593|ref|YP_001549937.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9211] gi|159887769|gb|ABX07983.1| Orn/DAP/Arg decarboxylase family 2 [Prochlorococcus marinus str. MIT 9211] Length = 648 Score = 53.7 bits (127), Expect = 7e-05, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 89/254 (35%), Gaps = 21/254 (8%) Query: 14 ENVSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALK 60 +++ L L + ++P +E AF + + +K Sbjct: 50 DSLDLMVLVKELNSRNLKSPLLLRFDDILEDRIKKLHGAFKNAISHYEYEGEYKGVFPIK 109 Query: 61 ANSNQAVIKTL----AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 N + V++ + GL+ S+ EL AL+ E ++ K I+ ++ Sbjct: 110 CNQQRHVVEEIVTCSREWHFGLEAGSKAELLIALSLLDDPEALLICNGYKDKRYIETSIL 169 Query: 117 SGI----YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 + +E E+ + +G I R ++ S G+K Sbjct: 170 ARQLGRKPIVVIEQLDEVDRIINATKKIGSAPFIGIRAKLSSQSSGRWSNSIGEKSKFGL 229 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 ++ ++ + HIGSQI+ I A + + +L+ G + Sbjct: 230 SIPEISQAVQQLKDAGLLKELILLHFHIGSQINDIAVLKNALQEASHIYIELKRLGAPMG 289 Query: 233 HIDVGGGLGIAYHS 246 H+DVGGGLGI Y Sbjct: 290 HLDVGGGLGIDYDG 303 >gi|281422617|ref|ZP_06253616.1| arginine 2-monooxygenase [Prevotella copri DSM 18205] gi|281403287|gb|EFB33967.1| arginine 2-monooxygenase [Prevotella copri DSM 18205] Length = 630 Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 111/340 (32%), Gaps = 35/340 (10%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 + L + + P ++ F A + V Y +K N Sbjct: 42 IDLRDIMDELALRDINAPVLLRFPDILDNRIEKTASCFQKAKEEYGYKGENFVIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 Q V++ + G GL++ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMQPVVEEIISHGKKFNLGLEVGSKPELHAVIAVQAQSDSLIICNGYKDESYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +EL + + A L K I R+ + + S G Sbjct: 162 KMGKRIFIVVEKLNELDIIEKVAKKLNVKPNIGIRIKLASSGSGKWAESGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + HIGSQI +I A + L G+N+ + Sbjct: 222 AELLTALKKIDEMGFHDCLRLIHFHIGSQITKIRRIQTALREAAQFYISLHKMGYNVDFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL--------------QCKIILEPGRFLV 280 D GGGLG+ Y S S I +Y + +I E GR L Sbjct: 282 DCGGGLGVDYDGTRSSSSESSVNYSIQEYVNDCVYTFVDAASKNNIEHPNLITESGRSLS 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 A +LV V+ + + + LY+ + Sbjct: 342 AHHSVLVIDVLETASLPEMPEEFEAKETDHQLVKDLYEIW 381 >gi|113953852|ref|YP_731930.1| arginine decarboxylase [Synechococcus sp. CC9311] gi|113881203|gb|ABI46161.1| arginine decarboxylase [Synechococcus sp. CC9311] Length = 644 Score = 53.3 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 88/254 (34%), Gaps = 21/254 (8%) Query: 14 ENVSLEKLA-----HVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALK 60 ++ L +L + P +E AF+ + +K Sbjct: 46 GSLDLMELVAGLQDRSLGLPLLIRFDDILEDRLERLHAAFERAVTRYDYEGRYQGVFPVK 105 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + V++ L G GL+ S+ EL AL+ E ++ K I+ A Sbjct: 106 CNQQRHVVEELVTCGRRWHFGLEAGSKAELLIALSLMDDPEALLICNGYKDQRYIETAIL 165 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E++ + + LG I R + S G K Sbjct: 166 ARRLGRRPVVVIEQPDEVQRIIDASQELGAAPLIGIRARLSSRSTGRWGSSVGDKAKFGL 225 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 I ++ A ++ + H+GSQI+ I A + L +L + G + Sbjct: 226 PAPEIIGAVEALRDANLLSELRLLHFHVGSQINDIVVVKDALQEASRLYVELHALGAPMG 285 Query: 233 HIDVGGGLGIAYHS 246 ++DVGGGLGI Y Sbjct: 286 YLDVGGGLGIDYDG 299 >gi|260911530|ref|ZP_05918117.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 472 str. F0295] gi|260634364|gb|EEX52467.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 472 str. F0295] Length = 118 Score = 53.3 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 19/65 (29%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 V++P Y + +N ++ D + A KA + S Sbjct: 9 EEVRSPMYIVEEAKLRRNLQLIASVATRADVEIILAFKAFALWKTFPIFKEYIRSTTASS 68 Query: 83 EGELR 87 E + Sbjct: 69 LSEAK 73 >gi|113474916|ref|YP_720977.1| arginine decarboxylase [Trichodesmium erythraeum IMS101] gi|110165964|gb|ABG50504.1| arginine decarboxylase [Trichodesmium erythraeum IMS101] Length = 693 Score = 53.3 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 115/341 (33%), Gaps = 34/341 (9%) Query: 14 ENVSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALK 60 ++ L +L + P + +E + F Y +K Sbjct: 79 GSLDLYELVESIKQRNIGLPLIIRFSDILEDRIERLNACFSKAIARYKYKNIYRGVFPVK 138 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N N +++ + G GL+ S+ EL A+A + ++ K + I+ A Sbjct: 139 CNQNSHLVEEVVKFGKPHKFGLEAGSKPELLIAIATLNTTDGLIICNGYKDREYIETAIL 198 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 I +E E++ + + + L K + RV +TG + Sbjct: 199 AQRLGKIPIIVIEQVEEVQLVIEASRKLNIKPVVGIRVKLSTKGMGRWAGTTGDRAKFGL 258 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 I + ST + + HIGSQI I A + + +L G N++ Sbjct: 259 NIPEIIKVVNQLKSTGILDSLQLLHFHIGSQISSISVIKDAIREASQIYVELAQLGANMK 318 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL-------------QCKIILEPGRFL 279 ++DVGGGL + Y +S + + + +I E GR + Sbjct: 319 YLDVGGGLAVDYDGSKSNFYASKNYDMQNYANDIVAEVKEACEEKNILPPILISESGRAV 378 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + +LV V+ + + + ++ + ++ Sbjct: 379 ASHQSVLVFDVLGVSQIPKEEPPVIGKGEHLILQNLYETYQ 419 >gi|258647760|ref|ZP_05735229.1| arginine 2-monooxygenase [Prevotella tannerae ATCC 51259] gi|260852617|gb|EEX72486.1| arginine 2-monooxygenase [Prevotella tannerae ATCC 51259] Length = 630 Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 101/272 (37%), Gaps = 17/272 (6%) Query: 18 LEKLAHVVQT-PFYCYSTTAIEKNYLT----FSNAFDGMD----TMVCYALKANSNQAVI 68 +E+LA T P ++ F+NA + + Y +K N + V+ Sbjct: 48 VEELAKQDITAPMLLRFPDILDNRIEKTAQCFNNAAKEYNFQAEHFIIYPIKVNQMRPVV 107 Query: 69 KTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIY 120 + + G GL+ S+ EL +A + ++ + K + I+LA Sbjct: 108 EEIISHGKRYNLGLEAGSKPELHAVIATNMDSDSPIICNGHKDQNFIELALLAQKMGKRV 167 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 +E EL + + A LG + + R+ + + S G + + Sbjct: 168 FLVIEKLPELAIIARTAEKLGVRPNLGIRIKLASSGAGKWEESGGDASKFGLNSSELLKA 227 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 L + + HIGSQI +I A + QLRS G +IQ +D GGGL Sbjct: 228 LQLLNEMNMRDCLKLIHFHIGSQITKIRRISTALREAAQFYVQLRSLGFDIQFVDCGGGL 287 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKII 272 G+ Y S+S I +Y + + Sbjct: 288 GVDYDGTRSSNSASSVNYSIQEYVNDCVYTFV 319 >gi|83649041|ref|YP_437476.1| arginine decarboxylase [Hahella chejuensis KCTC 2396] gi|83637084|gb|ABC33051.1| arginine decarboxylase [Hahella chejuensis KCTC 2396] Length = 636 Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 68/314 (21%), Positives = 106/314 (33%), Gaps = 36/314 (11%) Query: 16 VSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LKAN 62 VSL+ LA V P + AF+ + Y+ +K N Sbjct: 44 VSLKGLAQQVRDANLGLPVLVRFADILHHRVNHLCEAFNRAAEQLAYSGRYTAVYPVKVN 103 Query: 63 SNQAVIKTL------AHLG-SGLDIVSEGELRRALAAPVPAERIVFS---GVGKTIDEID 112 + VI+ + A G GL+ S+ EL LA P IV + + Sbjct: 104 QQRRVIEEIVAAQPAAANGQIGLEAGSKPELIAVLAMSNPGATIVCNGYKDREFIRLALL 163 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 VE +EL + + + S+G I R + + + G+K Sbjct: 164 GQQMGYKVYIVVEKLNELTYVLEESRSMGVTPRIGVRARLASIGKGNWQNTGGEKSKFGL 223 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + L + + H+GSQI I + +LR G +++ Sbjct: 224 SSVQILQVLDTLKQANALESLQLLHFHLGSQIANIRDIQTGLRECARFYGELRRQGADVK 283 Query: 233 HIDVGGGLGIAYHSDH------RPPSSSDYASL-------IHQYFGNLQCKIILEPGRFL 279 +DVGGGLGI Y S +YA G +I E GR + Sbjct: 284 IVDVGGGLGIDYEGTRSRSACSVNYSVHEYAFHVLRTIKEECDREGIPHPNVITESGRAI 343 Query: 280 VADVGILVTKVISI 293 A +L+T VI Sbjct: 344 TAHHAVLITDVIDR 357 >gi|300718237|ref|YP_003743040.1| Biosynthetic arginine decarboxylase [Erwinia billingiae Eb661] gi|299064073|emb|CAX61193.1| Biosynthetic arginine decarboxylase [Erwinia billingiae Eb661] Length = 658 Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 70/362 (19%), Positives = 126/362 (34%), Gaps = 37/362 (10%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L KL + P ++ + + AF D + Y +K N Sbjct: 70 VDLAKLVKEREVEGQRLPALFCFPQILQHRLRSINAAFKRARESYGYRGDYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHKRVIESLINSGEPLGLEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKM 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E T + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVLEKMTEVKLVLEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L ++ + + H+GSQ+ I + +L G NIQ DV Sbjct: 250 VLKLVDIMREAGRMESLQLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIQCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQY-------FGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + +I E GR + A Sbjct: 310 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWAIGDACEEHNLPHPTVITESGRAVTAHH 369 Query: 284 GILVTKVISIKKSADKTFVILDVAM-----NDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +LV+ +I ++++ + + + + D Sbjct: 370 TVLVSNIIGVERNEFSEPQTPSADSPRPIVSMWDTWQEMHQPNNRRSLREWLHDSQMDLF 429 Query: 339 DI 340 DI Sbjct: 430 DI 431 >gi|242238002|ref|YP_002986183.1| arginine decarboxylase [Dickeya dadantii Ech703] gi|242130059|gb|ACS84361.1| arginine decarboxylase [Dickeya dadantii Ech703] Length = 657 Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 69/362 (19%), Positives = 122/362 (33%), Gaps = 37/362 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L +L Q P ++ + + AF + Y +K N Sbjct: 69 VDLAELVKERQQDNQRLPALFCFPQILQHRLRSINAAFRRARESFGYEGGYFLVYPIKVN 128 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI+ L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 129 QHRRVIEALVNSGEPLGLEAGSKAELMAVLAHAGMTRTVIVCNGYKDREYIRLALIGEKI 188 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E T + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 189 GHKVYLVIEKMTEIKLVLEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAAQ 248 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L + + + H+GSQ+ I + +L G NIQ DV Sbjct: 249 VLHLVELLRQANRLDSLQLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDV 308 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + + +I E GR + A Sbjct: 309 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGEACNEYDLPHPTVITESGRAVTAHH 368 Query: 284 GILVTKVIS-----IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +LV+ +I + + + + + + D Sbjct: 369 TVLVSNIIGVERNEFSEPEAPSEDAPRALESLWGTWQEVNQPGNRRSLREWLHDSQMDLY 428 Query: 339 DI 340 DI Sbjct: 429 DI 430 >gi|170078414|ref|YP_001735052.1| arginine decarboxylase [Synechococcus sp. PCC 7002] gi|169886083|gb|ACA99796.1| arginine decarboxylase [Synechococcus sp. PCC 7002] Length = 644 Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 92/273 (33%), Gaps = 24/273 (8%) Query: 16 VSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKAN 62 + L +L + PF + + F Y +K N Sbjct: 55 IDLFELVESLKQRNIGLPFLIRFPDILRDRIERLQDCFATAIARYDYPNHYRGVYPVKCN 114 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPA---ERIVFSGVGKTIDEIDL-- 113 + +++ L LG GL+ S+ EL A+A P ER++ K I+ Sbjct: 115 QQRHLVEDLVELGRTHHLGLEAGSKPELMIAIALLEPEADQERLLICNGYKDQHYIETAL 174 Query: 114 -ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 A Q G V + E L RA P+ + + + KFG Sbjct: 175 LATQLGHRALIVIEQPEELDLVIRASQSLGIRPMLGIRAKLASRGIGRWGGSSGDRAKFG 234 Query: 173 IPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 + I QI L + + + HIGSQ+ I A + + +L G + Sbjct: 235 LTIPQILRLVEKLQAEEMLDCLQLLHYHIGSQLSSISVVKSAIREASQIYVELVKLGAPM 294 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 +DVGGGL + Y SS ++ + Sbjct: 295 GFLDVGGGLAVDYSGSKNNFPSSKNYNMQNYAN 327 >gi|37527545|ref|NP_930889.1| arginine decarboxylase [Photorhabdus luminescens subsp. laumondii TTO1] gi|48474343|sp|Q7N121|SPEA_PHOLL RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|36786980|emb|CAE16054.1| biosynthetic arginine decarboxylase (ADC) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 634 Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 73/350 (20%), Positives = 129/350 (36%), Gaps = 35/350 (10%) Query: 16 VSLEKLAHVVQT-------PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALK 60 + L +L VQ P ++ + + AF D + Y +K Sbjct: 44 IDLAELVKRVQQEQKHLRLPALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIK 103 Query: 61 ANSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 N + VI++LA G GL+ S+ EL LA ++ K + I LAL Sbjct: 104 VNQQRRVIESLASSGEPLGLEAGSKAELMAVLAHAGMTRTVIVCNGYKDREYIRLALIGE 163 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPI 175 V E + + + ++ + R+ + + K ++G ++ KFG+ Sbjct: 164 KLGHKVYLVIEKMSEIAQVLEEAERLNVIPRLGVRARLASQGSGKWQASGGEKSKFGLAA 223 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 Q+ L + + + + H+GSQ+ I + +L G NIQ Sbjct: 224 TQVLQLVETLRAVDRLDSLQLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCF 283 Query: 235 DVGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVA 281 DVGGGLG+ Y ++YA+ + G +I E GR L A Sbjct: 284 DVGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACDEHGLPHPTVITESGRALTA 343 Query: 282 DVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 +LV+ VI ++ + T +L++ + E++ N Sbjct: 344 HHTVLVSNVIGVE-RNEFTQTTPPAEDASRPLTSLWETWQEMHSEGNRRS 392 >gi|218246486|ref|YP_002371857.1| arginine decarboxylase [Cyanothece sp. PCC 8801] gi|218166964|gb|ACK65701.1| arginine decarboxylase [Cyanothece sp. PCC 8801] Length = 681 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 109/327 (33%), Gaps = 35/327 (10%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTL----AHLG 75 P + + + +FD Y +K N ++ +++T+ Sbjct: 77 PLLIRFSDILADRLARLNASFDRAIARYNYPNKYQGVYPIKCNQHRHIVETIVNYSKSYQ 136 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI----YCFNVESESELK 131 GL+ S+ EL ALA P+ + + ++ Sbjct: 137 FGLEAGSKPELMIALATLDPSLIAPNYAPIIICNGYKDPAYIKTAILATQLGYKPIIVIE 196 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINA-----NTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 L + ++L + + + A + + ++ KFG+ I +I ++ Y Sbjct: 197 QLEELFLTLEISKQLGIEPSLGVRAKLSTKGSGRWGNSTGDRAKFGLTIPEILTVVEYLK 256 Query: 187 TLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + + + + HIGSQI I A + + QL N+Q++DVGGGLG+ Y Sbjct: 257 SEENLHYLQLLHFHIGSQIASISVIKDAIREASQIYIQLAKVNPNMQYLDVGGGLGVDYD 316 Query: 246 SDHRPPSSSDYASLIHQYF-------------GNLQCKIILEPGRFLVADVGILVTKVIS 292 +S ++ + +I E GR + A +L+ V++ Sbjct: 317 GSKTNFYASKNYNMQNYANDIVAEVKESCEAANIEAPILISESGRAIAAHHSVLIFDVLN 376 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDA 319 + N +R Sbjct: 377 TNDVCTTPPEFIAENDNLIIRNLWQTY 403 >gi|297193993|ref|ZP_06911391.1| lysine/ornithine decarboxylase [Streptomyces pristinaespiralis ATCC 25486] gi|297152049|gb|EFH31499.1| lysine/ornithine decarboxylase [Streptomyces pristinaespiralis ATCC 25486] Length = 319 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 2/156 (1%) Query: 51 MDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDE 110 + +A+KA V+ L G G ++ S GEL A AA +PA IV KT+ E Sbjct: 130 APVLHAFAVKAAPLVPVLALLHAEGIGAEVASPGELALARAAGLPAGSIVLDSPAKTVAE 189 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK 170 + AL G N ++ EL ++ + +P+ RVN + + +ST K Sbjct: 190 LREALDLG-IAVNADNWQELARIDDLVAAGPTASPLGLRVNAQVGGGSIGALSTATPTSK 248 Query: 171 FGIPIHQIHSLYAYAS-TLPGVKISGVDMHIGSQID 205 FG+ + + L ++ + H GSQ Sbjct: 249 FGVTLRDEGARDRVVRACLERPWLTRLHTHSGSQGM 284 >gi|83941445|ref|ZP_00953907.1| hypothetical protein EE36_04413 [Sulfitobacter sp. EE-36] gi|83847265|gb|EAP85140.1| hypothetical protein EE36_04413 [Sulfitobacter sp. EE-36] Length = 214 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 23/61 (37%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP+Y + ++ N + + ALK + +V +A G S E+ Sbjct: 3 TPYYLIDKSRLQANMEKIAWLREASGAKSLLALKCFATWSVFDFMAQYMDGSTSSSLYEV 62 Query: 87 R 87 + Sbjct: 63 K 63 >gi|299142275|ref|ZP_07035408.1| arginine 2-monooxygenase [Prevotella oris C735] gi|298576364|gb|EFI48237.1| arginine 2-monooxygenase [Prevotella oris C735] Length = 630 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 108/323 (33%), Gaps = 30/323 (9%) Query: 28 PFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKANSNQAVIKTLAHLG---- 75 P ++ F A + + Y +K N Q V++ + G Sbjct: 59 PVLLRFPDILDNRIEKTFSCFQKAKAEYNFKAENFIIYPIKVNQMQPVVEEIISHGQKFN 118 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL+ S+ EL +A ++ ++ K I+LAL + + E Sbjct: 119 LGLEAGSKPELHAVIAVQCKSDSLIICNGYKDESYIELALLAQKMGKRIFIVVEKLNELD 178 Query: 136 RAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 KK + + I ++ + K +G KFG+ ++ + Sbjct: 179 IIARAAKKLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSAELLQALEKLDAMGMHD 238 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI +I A + L G+NI +D GGGLG+ Y Sbjct: 239 CLRLIHFHIGSQITKIRRIQTALREAAQFYVNLHKMGYNIDFVDCGGGLGVDYDGTRSSS 298 Query: 252 SSSDYASLIHQYFGNL--------------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 S S I +Y + II E GR L A +LV V+ Sbjct: 299 SESSVNYSIQEYVNDCVYTFVDAADKNNIQHPNIITESGRSLAAHHSVLVIDVLEAASLP 358 Query: 298 DKTFVILDVAMNDFMRPTLYDAY 320 + + + LY+ + Sbjct: 359 EMNEAFEPKESDHQLVKDLYEIW 381 >gi|281424869|ref|ZP_06255782.1| arginine 2-monooxygenase [Prevotella oris F0302] gi|281400987|gb|EFB31818.1| arginine 2-monooxygenase [Prevotella oris F0302] Length = 630 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 108/323 (33%), Gaps = 30/323 (9%) Query: 28 PFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKANSNQAVIKTLAHLG---- 75 P ++ F A + + Y +K N Q V++ + G Sbjct: 59 PVLLRFPDILDNRIEKTFSCFQKAKAEYNFKAENFIIYPIKVNQMQPVVEEIISHGQKFN 118 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL+ S+ EL +A ++ ++ K I+LAL + + E Sbjct: 119 LGLEAGSKPELHAVIAVQCKSDSLIICNGYKDESYIELALLAQKMGKRIFIVVEKLNELD 178 Query: 136 RAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 KK + + I ++ + K +G KFG+ ++ + Sbjct: 179 IIARAAKKLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSAELLQALEKLDAMGMHD 238 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI +I A + L G+NI +D GGGLG+ Y Sbjct: 239 CLRLIHFHIGSQITKIRRIQTALREAAQFYVNLHKMGYNIDFVDCGGGLGVDYDGTRSSS 298 Query: 252 SSSDYASLIHQYFGNL--------------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 S S I +Y + II E GR L A +LV V+ Sbjct: 299 SESSVNYSIQEYVNDCVYTFVDAADKNDIQHPNIITESGRSLAAHHSVLVIDVLEAASLP 358 Query: 298 DKTFVILDVAMNDFMRPTLYDAY 320 + + + LY+ + Sbjct: 359 EMNEAFEPKESDHQLVKDLYEIW 381 >gi|167946258|ref|ZP_02533332.1| hypothetical protein Epers_06802 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 68 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 5/32 (15%), Positives = 12/32 (37%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTF 44 + V ++ L +P + S + +N Sbjct: 36 IDGVPIDDLIERFGSPLFVLSEQRLRENVRRL 67 >gi|301792365|ref|XP_002931149.1| PREDICTED: LOW QUALITY PROTEIN: ornithine decarboxylase-like [Ailuropoda melanoleuca] Length = 497 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 99/338 (29%), Gaps = 21/338 (6%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 F I K +L + A Y K N ++ +KTL LG+GLD S+ ++ Sbjct: 85 FNVADLGDILKTHLRWLEASPR--VTPFY-XKGNDSRTTVKTLPALGTGLDCASKIGVQL 141 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + VP ER +++ + +I A + I E EL + IA Sbjct: 142 VQSLGVPPERKIYANPRQQASQIKYAASNRIQMMTSGGELELMEVPGAHPKAKLVLRIA- 200 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 T + KFG +H L A + + GV +GS E Sbjct: 201 ---------TDDSKAVCGLSVKFGXTLHTSGLLLDRAGERG-IDVIGVSFPVGSGCTNPE 250 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL------IHQ 262 + A + ++ +D GGG + + + Q Sbjct: 251 TXCGATPAAPCVFGMGAEVAFSLXLLDAGGGFPGSGDGKLKFEEIASVTDPRTSPSGQTQ 310 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + +V + + ++ ++ L D H Sbjct: 311 EXDSQPVASAFTLTVNIVXLLRAQTRSDDEEEPREQTFPCYVNGGVDGCSHCILCDHAHX 370 Query: 323 INYIVNPAGDRLHIHADIV-GPICETGDFIALNRKIAL 359 ++ GP C + D + R + Sbjct: 371 EPLQQKRPKPGEKYYSTSAQGPTCASLDRVVERRDLPE 408 >gi|256784445|ref|ZP_05522876.1| lysine/ornithine decarboxylase [Streptomyces lividans TK24] Length = 158 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 8/132 (6%) Query: 265 GNLQCKIILEPGRFLVADVGILVTKVI--SIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 ++EPGR LVAD G + V+ + +++AD + Sbjct: 13 HGGHLDFVVEPGRHLVADHGAIRAHVVRLTERRAADGERQHWLYLSCGKFNGLYEMDALQ 72 Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNRKI----ALPRPGDLLYIEKTGAYGAVQ 378 + D + A + GP C++ D + + A GD +++ GAY Sbjct: 73 YRLVFPGHPDGPCVPAVVAGPTCDSDDAYSHEEGLVPVPAALASGDPVWVLSCGAYATSY 132 Query: 379 SGT-YNSR-LLI 388 + +N L Sbjct: 133 TTRGFNGFAPLP 144 >gi|269837390|ref|YP_003319618.1| alanine racemase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269786653|gb|ACZ38796.1| alanine racemase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 366 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 20/71 (28%), Gaps = 1/71 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 + TP + + +N + + LK + + + G+ G Sbjct: 5 DELDTPCLVVHESILRRNVEEMAAFAREHGVAMRPHLKTHKTAEITRMQREAGAIGFTCA 64 Query: 82 SEGELRRALAA 92 GE A Sbjct: 65 KLGEAEALADA 75 >gi|86148471|ref|ZP_01066761.1| carboxynorspermidine decarboxylase [Vibrio sp. MED222] gi|85833768|gb|EAQ51936.1| carboxynorspermidine decarboxylase [Vibrio sp. MED222] Length = 301 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 67/223 (30%), Gaps = 8/223 (3%) Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 P Q L A + ++ + + + LL +++Q Sbjct: 55 YAGQDLANPARQFSRLGVQADHIKPEIFDEINGVMFHMNCENKDVDAFIGLLDSISKQFG 114 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGI 285 + + + +GGG+ + + + ++ LEPG ++ Sbjct: 115 EHLDKLDWVSMGGGVFFTWSG----YDIEKLGLALKAFSEKHGVQMYLEPGEAIITKTTD 170 Query: 286 LVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 LV V+ I ++ KT ++ + +Y+ + I C Sbjct: 171 LVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHG----YVIGSCSC 226 Query: 346 ETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 GD + G L++ + Y V+ +N + Sbjct: 227 LAGDQFCEASFDEPLKIGQKLHLLDSAGYTMVKLNWFNGLKMP 269 >gi|317493783|ref|ZP_07952200.1| arginine decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918110|gb|EFV39452.1| arginine decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 658 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 67/310 (21%), Positives = 115/310 (37%), Gaps = 33/310 (10%) Query: 16 VSLEKLAHVVQ------TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L +L +Q P ++ + + AF + Y +K Sbjct: 69 VDLTQLVEKLQKESNQRLPALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKV 128 Query: 62 NSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 N ++ VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 129 NQHRRVIESLVNSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEK 188 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIH 176 V E + + + ++ + R+ + + K S+G ++ KFG+ Sbjct: 189 LGHKVYLVIEKMSEIKLVMEEAERLNVVPRLGVRARLSSQGSGKWQSSGGEKSKFGLAAT 248 Query: 177 QIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q+ L + + + H+GSQ+ I + +L G NIQ D Sbjct: 249 QVLQLVETLREAGRLDSLQLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFD 308 Query: 236 VGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVAD 282 VGGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 309 VGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAH 368 Query: 283 VGILVTKVIS 292 +LV+ VI Sbjct: 369 HTVLVSNVIG 378 >gi|254496840|ref|ZP_05109691.1| metal-activated pyridoxal enzyme [Legionella drancourtii LLAP12] gi|254353967|gb|EET12651.1| metal-activated pyridoxal enzyme [Legionella drancourtii LLAP12] Length = 375 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 88/336 (26%), Gaps = 10/336 (2%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 E + L+K+ + TP + N + K + + + Sbjct: 4 EAIGLKKI--ELDTPCLVLDKDILRSNLDVMRQHVITNKINLRPHCKTHKCSKLAQLQID 61 Query: 74 LGS-GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G+ G+ E + +P I V K +A V ++E Sbjct: 62 YGAIGVCAAKISEAEVLIQNRIPNVLITSPIVTKNKITRLMACIETAPATLVVVDNEENI 121 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 L + I V D+++ + + F + I + L Sbjct: 122 LALNHAGESCQKMIHVLV--DVDSGIGRTGVKPEHALNFAMKISALPWLKLMGIQCYAGN 179 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + + + + + A +L+ Q N + G + Sbjct: 180 LQHIASFNERRQKSLSTMQMASELVSCFKAQ-GLNCPILTGTGTGTYDIDIEATGVTEIQ 238 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 YA + +Y + + + F A + + + ++ Sbjct: 239 PGSYAVMDVEYAAIGAKESMKQFDVFKPAMTLLTTVISTHRAEHVTVDAGTKAIYVDQTY 298 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVG---PIC 345 +P + + I A + G P+C Sbjct: 299 KPRIISHQGLEYDWGGFGDEHGKITA-VAGTKLPLC 333 >gi|195996327|ref|XP_002108032.1| hypothetical protein TRIADDRAFT_52094 [Trichoplax adhaerens] gi|190588808|gb|EDV28830.1| hypothetical protein TRIADDRAFT_52094 [Trichoplax adhaerens] Length = 470 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 18/211 (8%), Positives = 50/211 (23%), Gaps = 6/211 (2%) Query: 184 YASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 P + + + + ++ + + + Sbjct: 213 QIFFSPLYTDYQHSGRLNANTLTPNKIWRNNRTTIYFKTKMERSSVEPSEVCSNISGALD 272 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + + + + R + + S + +K Sbjct: 273 KDFPIKDNIHILAEPDRYFAETAFTLVVCVIGKRKIYGIDQKISAHKKSRNEVCNKEIFN 332 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD-IVGPICETGDFIALNRKIALPR- 361 V + + + + Y +++ + GP D I + R Sbjct: 333 YYVNDGRYGSFSEFLMSYGCRYPKVNGKKSKKLYSTCLWGPTVSGSDCIFHECYLPEERD 392 Query: 362 --PGDLL--YIEKTGAYGAVQSGTYNSRLLI 388 D+L + + GAY +V + +N Sbjct: 393 CAIKDILWTILIEMGAYTSVLATNFNGFTRP 423 >gi|73950479|ref|XP_544447.2| PREDICTED: similar to Ornithine decarboxylase (ODC) [Canis familiaris] Length = 165 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 2/87 (2%) Query: 49 DGMDTMV--CYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGK 106 G V Y K NS+ V+ LA LG+G D S+ EL + I+++ K Sbjct: 16 PGAPPRVLPFYVEKCNSSAWVLHVLASLGTGFDCASQLELEQVRGLGAAPSHIIYANPCK 75 Query: 107 TIDEIDLALQSGIYCFNVESESELKTL 133 + I +G+ + ++E Sbjct: 76 PVSHIHTLPATGLVLWLWTQDNESILP 102 >gi|302387296|ref|YP_003823118.1| alanine racemase domain protein [Clostridium saccharolyticum WM1] gi|302197924|gb|ADL05495.1| alanine racemase domain protein [Clostridium saccharolyticum WM1] Length = 373 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 3/95 (3%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 ++TP EKN +A D + +K + + G+ G+ Sbjct: 8 IQQLETPCLVIDVDLAEKNIRRMQDAADKAGCRLRPHIKTHKMPLFAQMQEMAGASGITC 67 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL 115 E + A E I + I A+ Sbjct: 68 AKVSEAE--VMADGGMEDIFIAYPMIGRFRIRRAM 100 >gi|33239501|ref|NP_874443.1| arginine decarboxylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|48474804|sp|Q7VEG4|SPEA_PROMA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|33237026|gb|AAP99095.1| Arginine decarboxylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 648 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 60/331 (18%), Positives = 106/331 (32%), Gaps = 29/331 (8%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLG--- 75 TP +E AF+ D + +K N + V++ + +G Sbjct: 68 TPLLLRFDDILEDRLKKLHQAFENAINQYGYNNDYQGVFPIKCNQQRHVVEEIVTIGRKW 127 Query: 76 -SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIYCFNVESESEL 130 GL+ S+ EL ALA + + K I+ +E E+ Sbjct: 128 HFGLEAGSKAELLIALALVNDPKAFLICNGYKDNRYIETTILARQLGRQPIVVIEQSDEV 187 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + LG I R ++ S G+K + ++ + Sbjct: 188 GRIIKASQKLGAAPLIGIRAKLSNQSSGRWGNSVGEKSKFGLSIPEILKAVQELTAAGLL 247 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH-- 248 ++ + H+GSQI+ I A + + +L G + H+DVGGGLG+ Y Sbjct: 248 NELILLHFHVGSQINDIAILKNALQEASQIYVELNRLGAPMGHLDVGGGLGVDYDGSRTA 307 Query: 249 ----RPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 S +YA+ + K+I E GRFL + IL+ V+ Sbjct: 308 TSASTNYSLQNYANDVVATIQECCKAKKVKVPKLISESGRFLSSHFSILIFNVLGTSSVP 367 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 + + Sbjct: 368 TQIAIETSNECLSVKNLRETLMILHQICEEK 398 >gi|301062808|ref|ZP_07203406.1| arginine 2-monooxygenase [delta proteobacterium NaphS2] gi|300443070|gb|EFK07237.1| arginine 2-monooxygenase [delta proteobacterium NaphS2] Length = 639 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 106/326 (32%), Gaps = 33/326 (10%) Query: 7 FEGSLHAE--NVSLEKLAHV-VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMV 55 + + + V L + + P + +++F Sbjct: 44 QDKEISVDLMGV-LSGIIDRGYELPVLLRIENILRSQIKELNDSFAAAIQEYGYQGAYRA 102 Query: 56 CYALKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 Y +K N Q V++ +A GS GL+ S+ EL AL+ E + K + + Sbjct: 103 VYPIKVNQQQQVVEAIARFGSEYHHGLEAGSKAELIAALSFLDDPEACLICNGYKDREFV 162 Query: 112 DLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE--- 168 DL L + E+ + K I + I +T + Sbjct: 163 DLGLYACRMGLKCFFVVEIPGELDLILERSKALGIRPLIGVRIKVSTQGGGHWMESGGDR 222 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISG-VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 FG+ I Q+ ++ + + H+GSQI I A + L Sbjct: 223 SIFGLSITQVLTVVEKLKRCEMLDCFQLLHYHLGSQIPNIRDIRSAVMEACRVYAGLVDE 282 Query: 228 GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY-------------FGNLQCKIILE 274 G +++ D+GGGL + Y + +S L II E Sbjct: 283 GAPMRYFDLGGGLAVDYDGSNTNYVTSRNYGLNEYCSDIIESIMSILDEENIPHPTIITE 342 Query: 275 PGRFLVADVGILVTKVISIKKSADKT 300 GR +VA +L+ V+ ++ + Sbjct: 343 TGRAIVAYYSVLLFNVLDSRRFEGEP 368 >gi|238501228|ref|XP_002381848.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357] gi|220692085|gb|EED48432.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357] Length = 155 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 35/116 (30%), Gaps = 13/116 (11%) Query: 270 KIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY--------- 320 +++ EPGR+ KV++ +K + + + Sbjct: 18 QVMAEPGRYYARSFYTAACKVVARRKQIGQDKLSQSDMLYLNDGIYGCFMNAVAENEIYR 77 Query: 321 ---HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTG 372 + + + + GP C+ D IA + + GD + E G Sbjct: 78 PILFKQETTSSTEREAGEHRYSVWGPTCDGLDCIAKEATMGCEVKVGDWVKFENMG 133 >gi|284008358|emb|CBA74748.1| biosynthetic arginine decarboxylase [Arsenophonus nasoniae] Length = 635 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 71/363 (19%), Positives = 124/363 (34%), Gaps = 38/363 (10%) Query: 16 VSLEKLAHVVQ-------TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALK 60 + L L VQ P ++ + + AF+ D + Y +K Sbjct: 44 IDLAALVEQVQEEQQHLRLPALFCFPQILQHRLRSINAAFERARRDYGYQGDYFLVYPIK 103 Query: 61 ANSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 N + VI+TL G GL+ S+ EL LA + ++ K + I LAL Sbjct: 104 VNQQRRVIETLVRSGEPLGLEAGSKAELMAVLAHAGMTKSVIVCNGYKDREYIRLALIGE 163 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPI 175 V E T + K+ + R+ + + K ++G ++ KFG+ Sbjct: 164 KLGHKVYLVIEKMTEIDLVLDEAKRLDVIPRLGVRARLASQGSGKWQASGGEKSKFGLAA 223 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 Q+ L ++ ++ + + H+GSQ+ I + +L G I+ Sbjct: 224 AQVLQLVDTLRSVGRLESLQLLHFHLGSQMSNIRDIATGARESARFYVELHKLGVKIECF 283 Query: 235 DVGGGLGIAYHSDHRPPSS------SDYASLIHQY-------FGNLQCKIILEPGRFLVA 281 DVGGGLG+ Y ++YA+ + G +I E GR L A Sbjct: 284 DVGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWAIGEACDEHGLGHPTVITESGRALTA 343 Query: 282 DVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN----PAGDRLHIH 337 +LV+ VI ++++ + D Sbjct: 344 HHTVLVSNVIGVERNEFTKITPPPKDTELSLISLWETWNEMQQGNGRSLREWLHDSQLSL 403 Query: 338 ADI 340 D+ Sbjct: 404 YDV 406 >gi|325919711|ref|ZP_08181713.1| arginine decarboxylase [Xanthomonas gardneri ATCC 19865] gi|325549819|gb|EGD20671.1| arginine decarboxylase [Xanthomonas gardneri ATCC 19865] Length = 628 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 103/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAH---LGS 76 P + + AF Y +K N ++ V TLA G Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELKL 177 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 178 VLEEARALEVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADC 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 238 LQLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 297 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 298 CSINYGLHSYASNIVQPLANACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 358 RVPDAHDDEPAAIRHLREIH 377 >gi|32472684|ref|NP_865678.1| arginine decarboxylase [Rhodopirellula baltica SH 1] gi|48474355|sp|Q7UTS2|SPEA_RHOBA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|32443921|emb|CAD73363.1| arginine decarboxylase [Rhodopirellula baltica SH 1] Length = 668 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 106/323 (32%), Gaps = 35/323 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 + L++L + P + F + +K N Sbjct: 48 IDLKELVDRLGQRNLDLPILLRFNGILRDRLRELDRCFKNAIHDHKYQSRYRCVFPIKVN 107 Query: 63 SNQAVIKTL----AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + A LG G++ S+ EL A A A + K + I LA Sbjct: 108 QQREVVQQIVSEGARLGFGIEAGSKPEL-VAAVAMGDANVPIVCNGFKDEEFIRLALLAQ 166 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE SEL + A +G + I RV + + S G + Sbjct: 167 RLGRNVLPVVEKVSELDLILDVAKDIGVRPTIGMRVKLATRGSGRWQASGGYRSKFGLTV 226 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + L + G + + H+GSQI I A + L G ++++ Sbjct: 227 AELLAQLDRLIAMDMGDCLQLLHFHVGSQIGNIRQLKSAILEAARIYVDLVRRGAGMRYL 286 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVA 281 DVGGGLG+ Y + +YA+ + + ++I E GR + A Sbjct: 287 DVGGGLGVDYDGSRSDSESSMNYTMQEYANDVVYHTQTVCDEAGVPHPELISESGRAVAA 346 Query: 282 DVGILVTKVISIKKSADKTFVIL 304 +LV + + + Sbjct: 347 HHSVLVMETLGVTSQGVANLPCW 369 >gi|323343815|ref|ZP_08084042.1| arginine 2-monooxygenase [Prevotella oralis ATCC 33269] gi|323095634|gb|EFZ38208.1| arginine 2-monooxygenase [Prevotella oralis ATCC 33269] Length = 630 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 65/356 (18%), Positives = 116/356 (32%), Gaps = 35/356 (9%) Query: 16 VSLEKLAHVVQ----TP-FYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 + L ++ + TP ++ F A + + Y +K N Sbjct: 42 IDLREVMDELSLRDVTPPVLLRFPDILDNRIEKTSSCFQRAKEEYGFKGENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 Q V++ + G GL+ S+ EL +A ++ ++ K I+LA Sbjct: 102 QMQPVVEEIISHGRKFNLGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE +EL + + + L K + R+ + + + S G Sbjct: 162 KMGKRIFIVVEKLNELDIIAKASKKLNVKPNLGIRIKLASSGSGKWEDSGGDASKFGLTS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L+ + + HIGSQI +I A + L G+++ + Sbjct: 222 SELLEALHILDEKGLHDSLKLIHFHIGSQITKIRRIQTALREAAQFYTNLHKMGYDVDFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL--------------QCKIILEPGRFLV 280 D GGGLG+ Y S S I +Y + II E GR L Sbjct: 282 DCGGGLGVDYDGTRSSHSESSVNYSIQEYVNDCIYTFVDAADKNGISHPNIITESGRSLA 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI 336 A +LV V+ + + + LY+ + +N Sbjct: 342 AHHSVLVIDVLETASLPEMPEEFEAKETDHQLVKDLYEIWDNLNPRSMMEDWHDAE 397 >gi|166367422|ref|YP_001659695.1| arginine decarboxylase [Microcystis aeruginosa NIES-843] gi|166089795|dbj|BAG04503.1| arginine decarboxylase [Microcystis aeruginosa NIES-843] Length = 679 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 107/348 (30%), Gaps = 42/348 (12%) Query: 14 ENVSLEKLA-----HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALK 60 ++ L +L + P + +E + F Y +K Sbjct: 73 GSLDLYELVSAIKRRNIGLPLLIRFSDILEDRIERLNACFSRAIARYNYPNVYRGVYPIK 132 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPA-----ERIVFSGVGKTIDEI 111 N ++ ++++L G GL+ S+ EL ALA PA ++ + + Sbjct: 133 CNQHRHIVESLVRFGKPYQFGLEAGSKPELMIALATLEPALNGKNDKTQPLLICNGYKDK 192 Query: 112 DLALQ-------SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIST 164 + +E EL + + LG + R ST Sbjct: 193 EYIETALLTTRLGHRPLIVIEQLEELYLTLRVSRQLGIAPHLGVRAKLGTKGVGRWGCST 252 Query: 165 GKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL 224 G + + + + + HIGSQI I A + + +L Sbjct: 253 GDRAKFGLTVPEILTVVTELEQAGMLDCLQLLHYHIGSQISAISVIKDAIREASQIYVEL 312 Query: 225 RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF-------------GNLQCKI 271 G N+ ++DVGGGLG+ Y +S ++ + + Sbjct: 313 AKLGANMTYLDVGGGLGVDYDGSKTNFYASKNYNMQNYANDIVAEVKEACEDAQISPPIL 372 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 I E GR + + +LV ++ + + + +R Sbjct: 373 ISESGRAIASHQSVLVFDILGSSEVPQNPPDPCNGKEHLILRNLWETY 420 >gi|307105415|gb|EFN53664.1| hypothetical protein CHLNCDRAFT_25497 [Chlorella variabilis] Length = 701 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 104/294 (35%), Gaps = 31/294 (10%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALKANSNQAVIKTLAHLGS--- 76 P + + AF Y +KAN ++A+I+ + G+ Sbjct: 125 PLLYRFLPIVGHRINKLNAAFRAAIDRFEYQGAYQGVFPVKANHDRALIQAVVEYGAPHS 184 Query: 77 -GLDIVSEGELRRALA--APVPAERIVFSGVGKTIDEIDLALQS----GIYCFNVESESE 129 GL++ S+ EL ++ A P + K + ++L L +E SE Sbjct: 185 FGLEVGSKAELVMVMSQLAGRPPGTNLVCNGYKDAEYMELVLHCRELGMNAMVVMEQYSE 244 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + L A LG + I R N H ++G K + ++ Sbjct: 245 VDLLLGTARRLGVRPSIGIRAKLTTRHNGHWGSTSGDKAKFGLRAREIVAAVNKLGDEGM 304 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH- 248 + + H+GSQI I + + L +L G ++++ID GGGL + Y Sbjct: 305 LDCLHLLHFHVGSQITNIRMVKEVMREASFLYAELVQMGASMRYIDCGGGLAVDYDGSFT 364 Query: 249 -----RPPSSSDYASLIHQYFGNLQCK-------IILEPGRFLVADVGILVTKV 290 + YA+ + + + II E GR L + +LV V Sbjct: 365 DSSASMSYTLQHYANDVVSAVQEVCIQRGIPPPTIITESGRALASHHSVLVFDV 418 >gi|294624828|ref|ZP_06703487.1| arginine decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600861|gb|EFF44939.1| arginine decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 628 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 66/337 (19%), Positives = 110/337 (32%), Gaps = 34/337 (10%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 VSL ++ V+ P + + AF Y +K N Sbjct: 42 VSLPEVVDAARAAGVKLPLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVN 101 Query: 63 SNQAVIKTLAH---LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 ++ V TLA G GL+ S+ EL L A ++ K + I LAL Sbjct: 102 QHRGVAGTLASHHGEGFGLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRK 160 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIH 176 E + + + + + K ++G + KFG+ Sbjct: 161 LGLQTFIVIEKPSELTLVLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPR 220 Query: 177 QIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q+ L+ ++ + H+GSQI + + +L G I H+D Sbjct: 221 QVLDLWKTLRDTEYADSLNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVD 280 Query: 236 VGGGLGIAYHSDHRPPSS------SDYASLI-------HQYFGNLQCKIILEPGRFLVAD 282 VGGGLGI Y YAS I + G +I+ E GR + A Sbjct: 281 VGGGLGIDYEGTRSRSYCSINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAH 340 Query: 283 VGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 +L+ V ++++ + +R Sbjct: 341 HAVLIANVSEVEQAPEGRVPDAHDDEPAAIRHLREIH 377 >gi|159030382|emb|CAO91278.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 679 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 107/348 (30%), Gaps = 42/348 (12%) Query: 14 ENVSLEKLA-----HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALK 60 ++ L +L + P + +E + F Y +K Sbjct: 73 GSLDLYELVSAIKRRNIGLPLLIRFSDILEDRIERLNACFSRAIARYNYPNVYRGVYPIK 132 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPA-----ERIVFSGVGKTIDEI 111 N ++ ++++L G GL+ S+ EL ALA PA ++ + + Sbjct: 133 CNQHRHIVESLVRFGKPYQFGLEAGSKPELMIALATLEPALSGKNDKTQPLLICNGYKDK 192 Query: 112 DL-------ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIST 164 + +E EL + + LG + R ST Sbjct: 193 EYLETALLTTRLGHRPLIVIEQLEELYLTLRVSRQLGIAPHLGVRAKLGTKGVGRWGCST 252 Query: 165 GKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL 224 G + + + + + HIGSQI I A + + +L Sbjct: 253 GDRAKFGLTVPEILTVVTELEQAGMLDCLQLLHYHIGSQISAISVIKDAIREASQIYVEL 312 Query: 225 RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF-------------GNLQCKI 271 G N+ ++DVGGGLG+ Y +S ++ + + Sbjct: 313 AKLGANMTYLDVGGGLGVDYDGSKTNFYASKNYNMQNYANDIVAEVKEACEDAQISPPIL 372 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 I E GR + + +LV ++ + + + +R Sbjct: 373 ISESGRAIASHQSVLVFDILGSSEVPQNPPDPCNGKEHLILRNLWETY 420 >gi|89899781|ref|YP_522252.1| alanine racemase-like protein [Rhodoferax ferrireducens T118] gi|89344518|gb|ABD68721.1| alanine racemase-like [Rhodoferax ferrireducens T118] Length = 379 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 7/55 (12%), Positives = 19/55 (34%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 +++ ++TP +++N + + +K N V + L Sbjct: 3 KQVLEQLETPALILDEARMDRNIERMRSHLRRLGVSFRPHVKTNKCIDVARRLLE 57 >gi|254469935|ref|ZP_05083340.1| alanine racemase, N-terminal domain protein [Pseudovibrio sp. JE062] gi|211961770|gb|EEA96965.1| alanine racemase, N-terminal domain protein [Pseudovibrio sp. JE062] Length = 375 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 45/132 (34%), Gaps = 1/132 (0%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 +QTP A+ +N ++ F + + LK + V + L G+ + Sbjct: 3 EDLQTPCLLLDEAAMNRNIKGMADRFKQIGVPLRPHLKTAKSIDVARILQDHGADRWTVS 62 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 + E + + S V + ++ I ++G +E+ T G Sbjct: 63 TLKEAEYFSSFGLKDILYAVSIVPQKMERIMQLNRAGAQMSICLDSTEMATHLSTMTLDG 122 Query: 142 KKAPIAFRVNPD 153 K + V+ D Sbjct: 123 PKPRVYLEVDVD 134 >gi|213025495|ref|ZP_03339942.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 81 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 8/70 (11%) Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 MS Y E L+AEN L +L P + Y I + FD +V +A Sbjct: 19 MSLPHYHAETDLNAEN--LLRLPAEFGCPVWVYDAHIIRRQIAALQQ-FD----VVRFAQ 71 Query: 60 KANSNQAVIK 69 KA SN ++ Sbjct: 72 KACSNIHILP 81 >gi|149194437|ref|ZP_01871534.1| arginine decarboxylase [Caminibacter mediatlanticus TB-2] gi|149135612|gb|EDM24091.1| arginine decarboxylase [Caminibacter mediatlanticus TB-2] Length = 608 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 80/280 (28%), Gaps = 26/280 (9%) Query: 2 SAFKYFEGSL--HAENVS-LEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM-- 51 + F G L + N L + Q P I K + +AF+ Sbjct: 11 NNFFIENGKLKVNFGNQPALIDIIKEIEERGFQGPILLRFPHLIRKQINSLYSAFNKAIK 70 Query: 52 ------DTMVCYALKANSNQ----AVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 + LK N +IK GL+ S+ EL A + Sbjct: 71 EFNYKGKFHAVFPLKVNQFPTFVKPLIKIANKFNYGLEAGSKAEL-ILAMAYNNKNAPIT 129 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESEL-----KTLNQRAVSLGKKAPIAFRVNPDINA 156 K D I LA +G ++V E + I R+ + Sbjct: 130 INGFKDKDMIRLAFIAGFMGYDVTITIEGLNELNSIIEVSKEYEKIPVNIGIRIRLHTSG 189 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL 216 S G + I ++ K+ + HIGSQI+ I KA + Sbjct: 190 VGIWAKSGGIESKFGLSSTEIIEAIDILKKEKMLDKLKMIHFHIGSQINDISPLKKAIRE 249 Query: 217 LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 ++ LR G GG +S +Y Sbjct: 250 SGNIYADLRKMGAKNLSAINIGGGLAIEYSQWEEKRDKNY 289 >gi|91790642|ref|YP_551594.1| D-3-hydroxyaspartate aldolase [Polaromonas sp. JS666] gi|91699867|gb|ABE46696.1| D-3-hydroxyaspartate aldolase [Polaromonas sp. JS666] Length = 371 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 1/71 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 V TP A E+N ++A G + K++ + LG+ G+ Sbjct: 14 DAVDTPALVLDLDAFERNLHRMADALKGSQVRLRPHAKSHKCPEIALRQIALGAVGVCCQ 73 Query: 82 SEGELRRALAA 92 E +AA Sbjct: 74 KVSEAAVFVAA 84 >gi|91976729|ref|YP_569388.1| alanine racemase-like [Rhodopseudomonas palustris BisB5] gi|91683185|gb|ABE39487.1| alanine racemase-like [Rhodopseudomonas palustris BisB5] Length = 360 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 1/77 (1%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GL 78 ++A + TP +E+N D +K + + + + G+ G+ Sbjct: 8 RIARDIGTPALVIDMDRVERNIARVQALCDAAGVANRPHIKTHKSPLLAQMQIAAGARGI 67 Query: 79 DIVSEGELRRALAAPVP 95 GE A + Sbjct: 68 TCQKIGEAEVMADAGID 84 >gi|320451384|ref|YP_004203480.1| arginine decarboxylase [Thermus scotoductus SA-01] gi|320151553|gb|ADW22931.1| arginine decarboxylase [Thermus scotoductus SA-01] Length = 630 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 116/335 (34%), Gaps = 41/335 (12%) Query: 7 FEGSLHA-----EN--VSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGM--- 51 +G L E SL ++ + P +E + AF Sbjct: 30 RDGELEVTPLGPEGPSASLLEIVEALRDEGRPLPLVLRFPQILEARVRELNEAFRRAMEK 89 Query: 52 -----DTMVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFS 102 Y +K N + V++T+A G GL+ S+ EL LA + E ++ + Sbjct: 90 YGYHGGYRGVYPVKVNQRRLVLETVAKAGRPYHYGLEAGSKAELALILAQDLSPEALITT 149 Query: 103 GVGKTIDEIDLA----LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANT 158 K D I LA S +E +EL + + + LG + + R Sbjct: 150 NGFKDDDFIRLALTGKKLSRNVVITLEKFAELSRVIRISKELGVRPKLGIRYKLKAKGAG 209 Query: 159 HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLR 218 + S G+ I ++ + + HIGSQ+ I A + Sbjct: 210 QWEASGGENAKFGLTTPEIIRAVEILKEEGLLDALVMIHAHIGSQVTDIRKIKAAVREAA 269 Query: 219 DLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFG 265 QLR G +Q++++GGGL + Y + +YA + G Sbjct: 270 QTYVQLRKLGAPLQYLNLGGGLAVDYDGSKTNFYASANYTLPEYAEDLVYVTKEVVEAQG 329 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 ++ E GR + A +LV +VI + +T Sbjct: 330 EPHPTLVTESGRAVTAYHEVLVLEVIDVITPPGET 364 Score = 43.7 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 15/124 (12%) Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET---GDFIAL----NRK 356 + ++ + ++ + A +V C++ D + Sbjct: 461 CNFSIFQSLPDAWAIHQLFPIVPLSRLNEPPTRQATLVDISCDSDGKIDRFIDLHDVRQS 520 Query: 357 IA--LPRPGD--LLYIEKTGAYGAVQSGTYNSRLLIPE--IMVNGSQFHIIR--PRMTFQ 408 + RPG+ L + GAY V +N + E ++V+ F I R P T + Sbjct: 521 LPIHPIRPGEAYYLGVFLVGAYQDVLGSNHNLFGQVGEAHVVVDEEGFAIERFVPGETAE 580 Query: 409 ELIE 412 ++IE Sbjct: 581 DVIE 584 >gi|262201693|ref|YP_003272901.1| alanine racemase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262085040|gb|ACY21008.1| alanine racemase domain protein [Gordonia bronchialis DSM 43247] Length = 360 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 1/81 (1%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIVSEG 84 TPF +E N ++ +V K + + + G +GL + + G Sbjct: 6 GTPFLVVDDERLEANLARVADRARDAGVLVRPHAKTHKCVEIARRQIAHGAAGLTVATVG 65 Query: 85 ELRRALAAPVPAERIVFSGVG 105 E A E + + Sbjct: 66 EAEVFAAVDEVREIFIAYPLW 86 >gi|288925355|ref|ZP_06419289.1| arginine 2-monooxygenase [Prevotella buccae D17] gi|315606757|ref|ZP_07881767.1| arginine 2-monooxygenase [Prevotella buccae ATCC 33574] gi|288337826|gb|EFC76178.1| arginine 2-monooxygenase [Prevotella buccae D17] gi|315251612|gb|EFU31591.1| arginine 2-monooxygenase [Prevotella buccae ATCC 33574] Length = 630 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 110/323 (34%), Gaps = 30/323 (9%) Query: 28 PFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKANSNQAVIKTLAHLG---- 75 P ++ F A + + + Y +K N Q V++ + G Sbjct: 59 PVLLRFPDILDNRIEKTASCFQKAKEEYNYKGENFIIYPIKVNQMQPVVEEIISHGRKFN 118 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIYCFNVESESELK 131 GL+ S+ EL +A ++ ++ K I+LA VE +EL+ Sbjct: 119 LGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNELE 178 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + A L K + R+ + + + S G + +L+ Sbjct: 179 IIAKAAKKLNVKPNLGIRIKLASSGSGKWEDSGGDASKFGLNSSELLEALHMLDEKGLHD 238 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI +I A + L G+N+ +D GGGLG+ Y Sbjct: 239 SLRLIHFHIGSQITKIRRIQTALREAAQFYINLHKMGYNVDFVDCGGGLGVDYDGTRSSS 298 Query: 252 SSSDYASLIHQYFGNL--------------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 S S I +Y + II E GR L A +LV V+ Sbjct: 299 SESSVNYSIQEYVNDCIYTFVDAADKNDISHPNIITESGRSLAAHHSVLVIDVLETASLP 358 Query: 298 DKTFVILDVAMNDFMRPTLYDAY 320 + + + LYD + Sbjct: 359 EMPEEFEAKETDHQLVKDLYDIW 381 >gi|289768325|ref|ZP_06527703.1| lysine/ornithine decarboxylase [Streptomyces lividans TK24] gi|289698524|gb|EFD65953.1| lysine/ornithine decarboxylase [Streptomyces lividans TK24] Length = 233 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 13/209 (6%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 Y IE+ + T + G V +A+KA V+ LA G+G D S GE+ +AL Sbjct: 14 VYDLAGIERRHDTLRDELPG--VHVRFAMKACPVDEVLAALAGRGAGADAASPGEVEQAL 71 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A VPA R+ + K+ I A + G+ F +S ++ L A +A Sbjct: 72 RAGVPAGRVHYGNTVKSDRNIAEAHRLGVRTFATDSLQDVAALAVHAPGARVFCRVA--- 128 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 T + +KFG P + A V +G+ +H+GSQ E++ Sbjct: 129 -------TGGAGALWGLSNKFGCPPGDAVRVLVAARDAGLV-PAGLSVHVGSQQMTSEAW 180 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 H A L D+ + L +G + H+++GGG Sbjct: 181 HGAVDDLGDVLRALGRHGIRVDHVNLGGG 209 >gi|289666341|ref|ZP_06487922.1| arginine decarboxylase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 628 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 102/320 (31%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---GS 76 P + + AF Y +K N ++ V TLA G Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNL 177 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 178 VLEEARALDVQPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADS 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 238 LKLLHFHMGSQISNVRDIANGMREATRYFVELSRLGVKISHVDVGGGLGIDYEGTRSRSY 297 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 298 CSINYGLHSYASNIVQPLASACEEHGLPPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 358 RVPDAHADEPAAIRHLREIH 377 >gi|256784446|ref|ZP_05522877.1| lysine/ornithine decarboxylase [Streptomyces lividans TK24] Length = 245 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 13/209 (6%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 Y IE+ + T + G V +A+KA V+ LA G+G D S GE+ +AL Sbjct: 26 VYDLAGIERRHDTLRDELPG--VHVRFAMKACPVDEVLAALAGRGAGADAASPGEVEQAL 83 Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 A VPA R+ + K+ I A + G+ F +S ++ L A +A Sbjct: 84 RAGVPAGRVHYGNTVKSDRNIAEAHRLGVRTFATDSLQDVAALAVHAPGARVFCRVA--- 140 Query: 151 NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESF 210 T + +KFG P + A V +G+ +H+GSQ E++ Sbjct: 141 -------TGGAGALWGLSNKFGCPPGDAVRVLVAARDAGLV-PAGLSVHVGSQQMTSEAW 192 Query: 211 HKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 H A L D+ + L +G + H+++GGG Sbjct: 193 HGAVDDLGDVLRALGRHGIRVDHVNLGGG 221 >gi|257059529|ref|YP_003137417.1| arginine decarboxylase [Cyanothece sp. PCC 8802] gi|256589695|gb|ACV00582.1| arginine decarboxylase [Cyanothece sp. PCC 8802] Length = 681 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 111/327 (33%), Gaps = 35/327 (10%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTL----AHLG 75 P + + + +FD Y +K N ++ +++T+ Sbjct: 77 PLLIRFSDILADRLARLNASFDRAIARYNYPNKYQGVYPIKCNQHRHIVETIVNYSKSYQ 136 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI----YCFNVESESELK 131 GL+ S+ EL ALA P+ + + ++ Sbjct: 137 FGLEAGSKPELMIALATLDPSLIAPNYAPIIICNGYKDPAYIKTAILATQLGYKPIIVIE 196 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINA-----NTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 L + ++L + + + A + + ++ KFG+ I +I ++ Y Sbjct: 197 QLEELFLTLEISKQLGIEPSLGVRAKLSTKGSGRWGNSTGDRAKFGLTIPEILTVVEYLK 256 Query: 187 TLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 + + + + HIGSQI I A + + QL N+Q++DVGGGLG+ Y Sbjct: 257 SEENLHYLQLLHFHIGSQIASISVIKDAIREASQIYIQLAKVNPNMQYLDVGGGLGVDYD 316 Query: 246 SDHRPPSSSDYASLIHQYF-------------GNLQCKIILEPGRFLVADVGILVTKVIS 292 +S ++ + +I E GR + A +L+ V++ Sbjct: 317 GSKTNFYASKNYNMQNYANDIVAEVKESCEAANIEAPILISESGRAIAAHHSVLIFDVLN 376 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDA 319 +++ N +R Sbjct: 377 TNNVCTTPPQLVEEKENLIIRNLRQTY 403 >gi|325914460|ref|ZP_08176804.1| arginine decarboxylase [Xanthomonas vesicatoria ATCC 35937] gi|325539230|gb|EGD10882.1| arginine decarboxylase [Xanthomonas vesicatoria ATCC 35937] Length = 628 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 104/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---GS 76 P + + AF Y +K N ++ V TLA G Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELKL 177 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 178 VLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADS 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 238 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 297 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 298 CSINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 358 RVPDAHDDEPAAIRHLREIH 377 >gi|196018615|ref|XP_002118839.1| hypothetical protein TRIADDRAFT_9870 [Trichoplax adhaerens] gi|190578025|gb|EDV18675.1| hypothetical protein TRIADDRAFT_9870 [Trichoplax adhaerens] Length = 54 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 29/47 (61%) Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGV 104 A+K N++ +++TL +LG D S GE++ + A V +RI+++ Sbjct: 1 AMKCNNDPVLLRTLINLGVSFDCASLGEIQSIINAGVNPDRIIYANT 47 >gi|282881177|ref|ZP_06289864.1| arginine 2-monooxygenase [Prevotella timonensis CRIS 5C-B1] gi|281304981|gb|EFA97054.1| arginine 2-monooxygenase [Prevotella timonensis CRIS 5C-B1] Length = 630 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 67/377 (17%), Positives = 118/377 (31%), Gaps = 44/377 (11%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 + L + V P ++ ++ F+ + Y +K N Sbjct: 42 IDLRDVMDELALRDVSAPVLLRFPDILDNRIEKTASCFEQASKEYNYTGQNFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 Q V++ + G GL+ S+ EL +A ++ ++ K + I+LA Sbjct: 102 QMQPVVEEIISHGQKFNLGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQNYIELALLAQ 161 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E +EL + + A +G + I R+ + + S G Sbjct: 162 KMGKRIFIVIEKLNELDIIAKAAKKIGVRPNIGIRIKLASSGSGKWAESGGDASKFGLNS 221 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + +L + + HIGSQI +I A + L G+ + + Sbjct: 222 SELLLALKMLEEKGLKDCLHLIHFHIGSQITKIRRIQTALREAAQYYINLHKMGYPVDFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL--------------QCKIILEPGRFLV 280 D GGGLG+ Y S S I +Y + +I E GR L Sbjct: 282 DCGGGLGVDYDGTRSSNSESSVNYSIQEYVNDCIYTFVEASDKNEIPHPNLITESGRSLS 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH--EINYIVNPAGDRLHIHA 338 A +L+ V+ + + LYD + I+ D I Sbjct: 342 AHHSVLIIDVLETASLPQMPEEFEPEENDHQLVKDLYDIWDNLNSRNIMEDWHDAEQIRE 401 Query: 339 DIVGPICETGDFIALNR 355 E+ D Sbjct: 402 -------ESLDLFTHGI 411 >gi|160947191|ref|ZP_02094358.1| hypothetical protein PEPMIC_01124 [Parvimonas micra ATCC 33270] gi|158446325|gb|EDP23320.1| hypothetical protein PEPMIC_01124 [Parvimonas micra ATCC 33270] Length = 353 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 31 CYSTTAIEKNYLTFSNAFDGM-DTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 CY+ + + + + YA+K+NS++ ++KT+ G DI SE E Sbjct: 26 CYNLDLLNNIIRGLKEDIKAIKNVEILYAVKSNSDKEILKTIYENNIGFDIASEEEF 82 >gi|86750314|ref|YP_486810.1| alanine racemase-like [Rhodopseudomonas palustris HaA2] gi|86573342|gb|ABD07899.1| Alanine racemase-like [Rhodopseudomonas palustris HaA2] Length = 360 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 1/77 (1%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GL 78 K+A + TP +E+N D +K + + + + G+ G+ Sbjct: 8 KIARDIGTPALVIDMDRVERNIARVQGLCDAAGVANRPHIKTHKSPLLAQMQIKAGARGI 67 Query: 79 DIVSEGELRRALAAPVP 95 GE A + Sbjct: 68 TCQKLGEAEVMAEAGID 84 >gi|3914997|sp|Q43075|SPE1_PEA RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC gi|609220|emb|CAA85773.1| arginine decarboxylase [Pisum sativum] Length = 728 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 95/277 (34%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGS--- 76 P ++ + AFDG Y +K N ++ +++ + GS Sbjct: 121 PLVVRFPDVLKDRLESIHAAFDGAIQLQGYESHYQGVYPVKCNQDRYIVEDIVEFGSSFR 180 Query: 77 -GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL+ S+ EL A++ R F D ++L + + L+ + Sbjct: 181 FGLEAGSKPELLLAMSCLCKGNREAFLVCNGFKDSEYISLALIARKLALNTVIVLEQEEE 240 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGK-----KEDKFGIPIHQIHSLYAYASTLPG 190 + + + R + A K S + KFG+ QI + L Sbjct: 241 LDMVVEISNKLCIRPVIGVRAKLKTKHSGHFGATSGDKGKFGLTTIQILHVVKKLEQLDM 300 Query: 191 VK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + + HIGSQI E + + +L G ++ +D+GGGLGI Y Sbjct: 301 LDCLQLLHFHIGSQIPTTELLADGVREASQIYCELLRLGAQMKVLDIGGGLGIDYDGSKS 360 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S A + +Y + + R V I Sbjct: 361 GDSDESVAYGLEEYAAAVVHAVKYVCDRKNVKHPVIC 397 >gi|292487093|ref|YP_003529963.1| arginine decarboxylase [Erwinia amylovora CFBP1430] gi|292900523|ref|YP_003539892.1| biosynthetic arginine decarboxylase [Erwinia amylovora ATCC 49946] gi|291200371|emb|CBJ47499.1| biosynthetic arginine decarboxylase [Erwinia amylovora ATCC 49946] gi|291552510|emb|CBA19555.1| arginine decarboxylase [Erwinia amylovora CFBP1430] gi|312171197|emb|CBX79456.1| arginine decarboxylase [Erwinia amylovora ATCC BAA-2158] Length = 658 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 70/362 (19%), Positives = 127/362 (35%), Gaps = 37/362 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L KL + P ++ + + AF D + Y +K N Sbjct: 70 VDLAKLVKEREAEGQRLPALFCFPQILQHRLRSINAAFKRARGSYGYNGDYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHKRVIESLINSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKM 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E T + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVLEKMTEVKLVLEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L ++ + + H+GSQ+ I + +L G NIQ DV Sbjct: 250 VLQLVDIMRDAGRMESLQLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQY-------FGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + +I E GR + A Sbjct: 310 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWAIGAACDEHDLPHPTVITESGRAVTAHH 369 Query: 284 GILVTKVISIKKSADKTFV-----ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +LV+ +I ++++ ++ + + + D Sbjct: 370 TVLVSNIIGVERNEFSEPQPPVEDAPRPIVSMWDTWQEMHEPNNRRSLREWLHDSQMDLF 429 Query: 339 DI 340 DI Sbjct: 430 DI 431 >gi|289669332|ref|ZP_06490407.1| arginine decarboxylase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 628 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 102/320 (31%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---GS 76 P + + AF Y +K N ++ V TLA G Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNL 177 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 178 VLEEARALDVQPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADS 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 238 LKLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 297 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 298 CSINYGLHSYASNIVQPLASACEEHGLPPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 358 RVPDAHADEPAAIRHLREIH 377 >gi|156740573|ref|YP_001430702.1| alanine racemase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156231901|gb|ABU56684.1| alanine racemase domain protein [Roseiflexus castenholzii DSM 13941] Length = 349 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 1/72 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + TP +E N F D +K + + + G+ G+ Sbjct: 3 IDDLDTPAVVIDLDRLEANIARFQAHLDRHGIANRPHIKTHKIPQIAQMQIAAGAVGITC 62 Query: 81 VSEGELRRALAA 92 GE A Sbjct: 63 QKLGEAEVMADA 74 >gi|116074087|ref|ZP_01471349.1| arginine decarboxylase [Synechococcus sp. RS9916] gi|116069392|gb|EAU75144.1| arginine decarboxylase [Synechococcus sp. RS9916] Length = 659 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 100/255 (39%), Gaps = 23/255 (9%) Query: 14 ENVSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LK 60 ++ L +L +Q P +E + AF+ T Y+ +K Sbjct: 61 GSLDLVELVEGLQGRNLNLPLLIRFDDILEDRLESLHAAFERAITRYGYSGRYQGVFPVK 120 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + V++ L G GL+ S+ EL AL+ E ++ K I+ A Sbjct: 121 CNQQRHVVEELVSCGRRWHFGLEAGSKAELLIALSLIDDPEALLICNGYKDQRYIETAIL 180 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E E++ + + LG I R + +T + S+ ++ KFG Sbjct: 181 ARRLGRRPVVVIEQADEVQRIIDASKELGAAPLIGIRARL-SSRSTGRWGSSVGEKAKFG 239 Query: 173 IPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 +P+ +I S ++ + H+GSQI+ I A + + +L G + Sbjct: 240 LPVPEILSTVEALREAGLLEELRLLHFHVGSQINDIAVVKDALQEASRIYVELHKLGAPM 299 Query: 232 QHIDVGGGLGIAYHS 246 ++DVGGGLGI Y Sbjct: 300 GYLDVGGGLGIDYDG 314 >gi|310766494|gb|ADP11444.1| arginine decarboxylase [Erwinia sp. Ejp617] Length = 658 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 70/362 (19%), Positives = 127/362 (35%), Gaps = 37/362 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L KL + P ++ + + AF D + Y +K N Sbjct: 70 VDLAKLVKEREAEGQRLPALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHKRVIESLINSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKM 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E T + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVLEKMTEVKLVLEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L ++ + + H+GSQ+ I + +L G NIQ DV Sbjct: 250 VLKLVEIMRDAGRMESLQLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQY-------FGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + +I E GR + A Sbjct: 310 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWAIGAACDEHDLPHPTVITESGRAVTAHH 369 Query: 284 GILVTKVISIKKSADKTFV-----ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +LV+ +I ++++ ++ + + + D Sbjct: 370 TVLVSNIIGVERNEFSEPQPPVEDAPRPIVSMWDTWQEMHEPNNRRSLREWLHDSQMDLF 429 Query: 339 DI 340 DI Sbjct: 430 DI 431 >gi|300727492|ref|ZP_07060883.1| arginine 2-monooxygenase [Prevotella bryantii B14] gi|299775195|gb|EFI71796.1| arginine 2-monooxygenase [Prevotella bryantii B14] Length = 630 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 63/323 (19%), Positives = 111/323 (34%), Gaps = 30/323 (9%) Query: 28 PFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKANSNQAVIKTLAHLG---- 75 P ++ F+ A D + Y +K N Q V++ + G Sbjct: 59 PVLLRFPDILDNRIEKTASCFAKAKKEYDFKAENFIIYPIKVNQMQPVVEEIISHGRKFN 118 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL+ S+ EL +A ++ ++ K + I+LAL + + E + Sbjct: 119 LGLEAGSKPELHAVIAVQCQSDSLIICNGYKDENYIELALLAQKMGKRIFIVIEKLNELE 178 Query: 136 RAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + K+ + + I ++ + K +G KFG+ ++ Sbjct: 179 IIARIAKRLHVKPNIGIRIKLASSGSGKWAESGGDASKFGLTSSELLEALNMLDEKGLHD 238 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI +I A + L G+N+ +D GGGLG+ Y Sbjct: 239 CLRLIHFHIGSQITKIRRIQTALREASQYYINLHKMGYNVDFVDCGGGLGVDYDGTRSSN 298 Query: 252 SSSDYASLIHQYFGNL--------------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 S S I +Y + II E GR L A +LV V+ Sbjct: 299 SESSVNYSIQEYVNDCVYTFVDAANKNNIPHPNIITESGRSLAAHHSVLVIDVLETASLP 358 Query: 298 DKTFVILDVAMNDFMRPTLYDAY 320 + + + LY+ + Sbjct: 359 EMPEEFEAKDNDHQLVKDLYEIW 381 >gi|62202126|gb|AAH92747.1| Zgc:110131 [Danio rerio] gi|182891682|gb|AAI64997.1| Zgc:110131 protein [Danio rerio] Length = 198 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 58/159 (36%), Gaps = 10/159 (6%) Query: 10 SLHAENVSLEKLAHVV--------QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 L + +L + ++ F+ I + + N D + Y +K+ Sbjct: 13 ELLEGSAALRDVIDKHIYDQTFAQKSAFFAADLGVIVQQQARWRNKMDQI--RPFYTVKS 70 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NS+ V++ LA L +G ++ EL V ++ I+ G K + I A + I Sbjct: 71 NSSPVVVELLASLRTGFICSNKHELDLVKGFGVSSQDIILGGTCKQLSHIKYAAKHNIPL 130 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHK 160 ++E+E++ + + + ++ Sbjct: 131 LVCDNEAEMRKIARCHPKAKVLLLLTSESCCEVCLRMCW 169 >gi|327540610|gb|EGF27184.1| Arginine decarboxylase [Rhodopirellula baltica WH47] Length = 668 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 106/323 (32%), Gaps = 35/323 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 + L++L + P + F + +K N Sbjct: 48 IDLKELVDRLGQRNLDLPILLRFNGILRDRLRELDRCFKNAIHDHKYQSRYRCVFPIKVN 107 Query: 63 SNQAVIKTL----AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + A LG G++ S+ EL A A A + K + I LA Sbjct: 108 QQREVVQQIVSEGARLGFGIEAGSKPEL-VAAVAMGDANVPIVCNGFKDEEFIRLALLAQ 166 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 VE SEL + A +G + I RV + + S G + Sbjct: 167 RLGRNVLPVVEKVSELDLILDVAKDIGVRPTIGMRVKLATRGSGRWQASGGYRSKFGLTV 226 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + L + G + + H+GSQI I A + L G ++++ Sbjct: 227 AELLAQLDRLIAMDMGDCLQLLHFHVGSQIGNIRQLKSAILEAARIYVDLVRRGAGMRYL 286 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVA 281 DVGGGLG+ Y + +YA+ + + ++I E GR + A Sbjct: 287 DVGGGLGVDYDGSRSDSESSMNYTMQEYANDVVYHTQTVCDEAGVPHPELISESGRAVAA 346 Query: 282 DVGILVTKVISIKKSADKTFVIL 304 +LV + + + Sbjct: 347 HHSVLVMETLGVTSQGVANLPSW 369 >gi|317049417|ref|YP_004117065.1| arginine decarboxylase [Pantoea sp. At-9b] gi|316951034|gb|ADU70509.1| arginine decarboxylase [Pantoea sp. At-9b] Length = 658 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 129/362 (35%), Gaps = 37/362 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L KL + P ++ + + AF D + Y +K N Sbjct: 70 VDLAKLVKEREADGQRLPALFCFPQILQHRLRSINGAFKRARESYGYKGDYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHKRVIESLVNSGEPLGLEAGSKAELMAVLAHAGKTRTVIVCNGYKDREYIRLALIGEKL 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E T + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVIEKMTEVRMVLEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLAASQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L ++ + + H+GSQ+ I + +L G NI+ DV Sbjct: 250 VLQLVEIMRKAGRIESLQLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIKCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQY-------FGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWAIGDACDEHGLEHPTVITESGRAVTAHH 369 Query: 284 GILVTKVISIKKSADKTFVILDVA-----MNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +LV+ +I ++++ DV + + + + D Sbjct: 370 TVLVSNIIGVERNEFSNPEAPDVDAPRPIQSMWDTWQEMHEPNVRRSLREWLHDSQMDLF 429 Query: 339 DI 340 DI Sbjct: 430 DI 431 >gi|221236140|ref|YP_002518577.1| alanine racemase [Caulobacter crescentus NA1000] gi|220965313|gb|ACL96669.1| alanine racemase [Caulobacter crescentus NA1000] Length = 402 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 1/65 (1%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEG 84 QTP A+E+N D + K + + + + G+ GL + G Sbjct: 16 QTPLLVVDRAALERNLARMQALCDAAGVRLRAHGKTHKCSTLGRLIIERGAVGLCCQTVG 75 Query: 85 ELRRA 89 E Sbjct: 76 EAEAY 80 >gi|254442154|ref|ZP_05055630.1| arginine decarboxylase [Verrucomicrobiae bacterium DG1235] gi|198256462|gb|EDY80770.1| arginine decarboxylase [Verrucomicrobiae bacterium DG1235] Length = 656 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 103/317 (32%), Gaps = 34/317 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDG--------MDTMVCYALKAN 62 V ++ + T P + + AF + + +K N Sbjct: 47 VRVDDVIKEAATKGIKAPMVIRFQDLLRHRVERLNKAFAESIKEEEYPANYRGVFPIKVN 106 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS- 117 + VI+ + G GL+ S+ EL A+A + ++ K D I LAL Sbjct: 107 QLREVIEEIQDAGENHSYGLEAGSKPELLIAMAMHQNSNSLLVCNGYKDEDYIRLALNYR 166 Query: 118 ---GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 E SE++ + + + L + R +STG Sbjct: 167 KIGKKIIIVAEQLSEVELIIEMSRELEVDPLVGLRAKLGTRGEGKWAMSTGDNAKFGLSA 226 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + + + + HIGSQ+ I + A QL+ G + + Sbjct: 227 MEMLEAARMLEKAELSGSLRLLHFHIGSQVPNIITLKTAVVEATRYYCQLQKMGFPMGFL 286 Query: 235 DVGGGLGIAYHSDHRPPSS------SDYAS-------LIHQYFGNLQCKIILEPGRFLVA 281 DVGGGL I Y S +YA I +I E GR +VA Sbjct: 287 DVGGGLAIDYDGSRSNYESSTNYTLEEYARDVVYNVKQICVKMKVPCPDLITESGRAIVA 346 Query: 282 DVGILVTKVISIKKSAD 298 +L+T+V + Sbjct: 347 PHSVLITEVSGRISKNE 363 >gi|188534945|ref|YP_001908742.1| arginine decarboxylase [Erwinia tasmaniensis Et1/99] gi|188029987|emb|CAO97871.1| Biosynthetic arginine decarboxylase [Erwinia tasmaniensis Et1/99] Length = 658 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 70/362 (19%), Positives = 126/362 (34%), Gaps = 37/362 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L KL + P ++ + + AF D + Y +K N Sbjct: 70 VDLAKLVKEREAEGQRLPALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHKRVIESLINSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKM 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E T + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVLEKMTEVKLVLEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L ++ + + H+GSQ+ I + +L G NIQ DV Sbjct: 250 VLKLVEIMREAGRMESLQLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQY-------FGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + +I E GR + A Sbjct: 310 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWAIGAACDEHDLPHPTVITESGRAVTAHH 369 Query: 284 GILVTKVISIKKSADKTFV-----ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +LV+ +I ++++ ++ + + D Sbjct: 370 TVLVSNIIGVERNEFSEPQPPVEDAPRPIVSMWDTWQEMHEPSNRRSLREWLHDSQMDLF 429 Query: 339 DI 340 DI Sbjct: 430 DI 431 >gi|294496536|ref|YP_003543029.1| Orn/DAP/Arg decarboxylase 2 [Methanohalophilus mahii DSM 5219] gi|292667535|gb|ADE37384.1| Orn/DAP/Arg decarboxylase 2 [Methanohalophilus mahii DSM 5219] Length = 347 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 113/353 (32%), Gaps = 31/353 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS-NQAVIKTLAHLGSGLDIVSEGEL 86 P + S I + Y + D +V Y+ K N +V++ + + + + Sbjct: 6 PKFILSKKVIMQQYGLVEDIAD----IVSYSSKTNPKVTSVLEEMTNCLFSV------HM 55 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 L R VF G + + GI F +++E +L L + + Sbjct: 56 ENELKHIDDLSRTVFLAQGWSSAQAKDLYDRGIRNFILDNEHDLDVLLTTLKDTNHRVNL 115 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+ + ++ FG+P I+ P + G+ H +Q Sbjct: 116 MLRL------KLRENSIRTERYFVFGMPSATINRHIGELVDSPNIGKLGIHFHRKTQNVS 169 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 I +++GGGL Y + + + + Sbjct: 170 EWKLQ-----RDIEDVITPETLDAIDILNIGGGLPSVYANSNADVIGGIFKRITDFRKWL 224 Query: 267 LQCKI--ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + I ++EPGR++ A G LVT+V+++ + + + D + + Sbjct: 225 HERDISLMVEPGRYIAAPAGKLVTRVMAVYEDNVIVNASVYNSDMDAILVPV------KL 278 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGA 376 + N I G + D + P+ GD + GAY Sbjct: 279 RVENEVSSHEGEAYVIKGCTPCSMDLFRYRVYLENRPQIGDPITFINAGAYNF 331 >gi|207722228|ref|YP_002252664.1| siderophore synthesis decarboxylase (partial sequence c terminus) protein [Ralstonia solanacearum MolK2] gi|207728413|ref|YP_002256807.1| putative siderophore synthesis decarboxylase (partial sequence c terminus) protein [Ralstonia solanacearum MolK2] gi|206587404|emb|CAQ17986.1| putative siderophore synthesis decarboxylase (partial sequence c terminus) protein [Ralstonia solanacearum MolK2] gi|206591659|emb|CAQ57271.1| putative siderophore synthesis decarboxylase (partial sequence c terminus) protein [Ralstonia solanacearum MolK2] Length = 114 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 8/94 (8%) Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRL-------HIHADIVGPICETGDFIALNR 355 +L + F P + H + N + G +C D +A + Sbjct: 1 MLRGGTHHFRLPASWQHNHPFAIVPNAQWTYPFARPSVQAQAVTLCGELCTPKDVLARDV 60 Query: 356 KIALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLI 388 + GD + + GAYG S + S Sbjct: 61 VVDRLSVGDRIVFQLAGAYGWHISHHDFLSHPHP 94 >gi|294667461|ref|ZP_06732678.1| arginine decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602794|gb|EFF46228.1| arginine decarboxylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 628 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 103/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAH---LGS 76 P + + AF Y +K N ++ V TLA G Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTL 177 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 178 VLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADS 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 238 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 297 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 298 CSINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 358 RVPDAHDDEPAAIRHLREIH 377 >gi|223937508|ref|ZP_03629412.1| arginine decarboxylase [bacterium Ellin514] gi|223893859|gb|EEF60316.1| arginine decarboxylase [bacterium Ellin514] Length = 646 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 60/311 (19%), Positives = 108/311 (34%), Gaps = 34/311 (10%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALKAN 62 V + + ++ P + + + AF T Y +K N Sbjct: 50 VDITDVIEEAKGRGLKFPVLIRFQDILRNRVESINTAFRNSITEFNYQGSYRGVFPIKVN 109 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 + V++ + G GL++ S+ EL LA ++ K I +A+ Sbjct: 110 QLREVVEEILEAGKPFNFGLEVGSKPELFAGLALQNQIGSLIICNGYKDAGFIKMAILGQ 169 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPI 175 V E ++ +++ K+ + V + K +G + KFG+ Sbjct: 170 KLGKKVIMVVEKLEELRQIITISKQLGVEPSVGIRARLHSKGAGKWAESGGENAKFGLST 229 Query: 176 HQIHSLYAYASTLPGVKISG-VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 ++ + + + + HIGSQ+ I + KA + +L G NI+++ Sbjct: 230 SELLAATEMLKSEGLGQCFKLLHFHIGSQVPDILTVKKAVQEASRFYAKLFKMGFNIEYM 289 Query: 235 DVGGGLGIAYHS-------------DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVA 281 DVGGGLG+ Y Y + II E GR +VA Sbjct: 290 DVGGGLGVDYDGSRSAFDSSTNYTLQEYTNDIVYYVGDVCNAEKVPHPHIISESGRAIVA 349 Query: 282 DVGILVTKVIS 292 +LV +V Sbjct: 350 HHSMLVVEVFG 360 >gi|21110327|gb|AAM38760.1| biosynthetic arginine decarboxylase [Xanthomonas axonopodis pv. citri str. 306] Length = 645 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 103/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAH---LGS 76 P + + AF Y +K N ++ V TLA G Sbjct: 76 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 135 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 136 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTL 194 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 195 VLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADS 254 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 255 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 314 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 315 CSINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 374 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 375 RVPDAHDDEPAAIRHLREIH 394 >gi|77748748|ref|NP_644224.2| arginine decarboxylase [Xanthomonas axonopodis pv. citri str. 306] gi|48474491|sp|Q8PFQ5|SPEA_XANAC RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC Length = 628 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 103/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAH---LGS 76 P + + AF Y +K N ++ V TLA G Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTL 177 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 178 VLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADS 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 238 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 297 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 298 CSINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 358 RVPDAHDDEPAAIRHLREIH 377 >gi|197285941|ref|YP_002151813.1| arginine decarboxylase [Proteus mirabilis HI4320] gi|227356449|ref|ZP_03840837.1| biosynthetic arginine decarboxylase [Proteus mirabilis ATCC 29906] gi|226732569|sp|B4F1A4|SPEA_PROMH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|194683428|emb|CAR44185.1| biosynthetic arginine decarboxylase [Proteus mirabilis HI4320] gi|227163559|gb|EEI48480.1| biosynthetic arginine decarboxylase [Proteus mirabilis ATCC 29906] Length = 635 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 117/311 (37%), Gaps = 34/311 (10%) Query: 16 VSLEKLAHVVQ-------TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALK 60 + L +L VQ P ++ + + AF D + Y +K Sbjct: 44 LDLTELVKQVQEEHSHLRLPALFCFPQILQHRLRSINAAFHRARESYGYKGDYFLVYPIK 103 Query: 61 ANSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 N + VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 104 VNQQRRVIESLINAGEPLGLEAGSKAELMAVLAHANMTSSVIVCNGYKDREYIRLALTGE 163 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPI 175 V E + + + ++ + R+ + + K ++G ++ KFG+ Sbjct: 164 KLGHKVFLVIEKMSEIKMVLEEAERLEVIPRLGVRARLASQGSGKWQASGGEKSKFGLAA 223 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 Q+ L + + + H+GSQ+ I + +L G NIQ+ Sbjct: 224 TQVLQLIDTLRQAGRLDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQYF 283 Query: 235 DVGGGLGIAYHSDHRPPSS------SDYASLIHQYFGN-------LQCKIILEPGRFLVA 281 DVGGGLG+ Y ++YA+ + G+ +I E GR L A Sbjct: 284 DVGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWAIGDACDENELPHPTVITESGRALTA 343 Query: 282 DVGILVTKVIS 292 +L++ VI Sbjct: 344 HHTVLISNVIG 354 >gi|166713840|ref|ZP_02245047.1| arginine decarboxylase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 628 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 103/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAH---LGS 76 P + + AF Y +K N ++ V TLA G Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNL 177 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 178 VLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADS 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 238 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 297 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 298 CSINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 358 RVPDAHDDEPAAIRHLREIH 377 >gi|188574481|ref|YP_001911410.1| arginine decarboxylase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188518933|gb|ACD56878.1| biosynthetic arginine decarboxylase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 628 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 103/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---GS 76 P + + AF Y +K N ++ V TLA G Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNL 177 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 178 VLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADS 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 238 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 297 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 298 CSINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 358 RVPDAHADEPAAIRHLREIH 377 >gi|122878996|ref|YP_198859.6| arginine decarboxylase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 628 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 103/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---GS 76 P + + AF Y +K N ++ V TLA G Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNL 177 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 178 VLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADS 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 238 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 297 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 298 CSINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 358 RVPDAHADEPAAIRHLREIH 377 >gi|84621852|ref|YP_449224.1| arginine decarboxylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58424437|gb|AAW73474.1| biosynthetic arginine decarboxylase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84365792|dbj|BAE66950.1| biosynthetic arginine decarboxylase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 645 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 103/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---GS 76 P + + AF Y +K N ++ V TLA G Sbjct: 76 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 135 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 136 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNL 194 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 195 VLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADS 254 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 255 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 314 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 315 CSINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 374 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 375 RVPDAHADEPAAIRHLREIH 394 >gi|78778431|ref|YP_396543.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9312] gi|123554841|sp|Q31DD8|SPEA_PROM9 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|78711930|gb|ABB49107.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9312] Length = 648 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 106/314 (33%), Gaps = 34/314 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAF----DGMDTMVCY----ALKAN 62 + L KL +++ P ++ ++F Y +K N Sbjct: 52 IDLFKLVKELKSREINPPLIIRFNDILKDRINALHDSFFKAIKTYKYKNIYQGVFPVKCN 111 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + GS GL++ S+ EL LA ++ K I++A Sbjct: 112 QQKNVLEKIIEFGSQWNFGLEVGSKSELLIGLALLENQNSLLICNGYKDKKYIEIATLAR 171 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E E+K + Q L I R ++ S G Sbjct: 172 KLGKNPIIVIEQRDEVKRIIQAVQELNATPLIGIRAKLSSKSSGRWGKSIGDNSKFGLSI 231 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + ++ ++ + HIGSQI I A + + +L G +Q+I Sbjct: 232 PEIMLTIKELKEANLINEMKLLHFHIGSQISDIAVIKDALQEASQIYVELCKLGAPMQYI 291 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVA 281 DVGGGLGI + S +YA+ + II E GR +++ Sbjct: 292 DVGGGLGIDFDGTKTSSNTSTNYSLQNYANDVIATIKDSCELNNIKHPIIISESGRAIIS 351 Query: 282 DVGILVTKVISIKK 295 +L+ V+ Sbjct: 352 HCSVLIFNVLGTSH 365 >gi|123967583|ref|YP_001008441.1| arginine decarboxylase [Prochlorococcus marinus str. AS9601] gi|166220853|sp|A2BNH3|SPEA_PROMS RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|123197693|gb|ABM69334.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str. AS9601] Length = 648 Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 106/314 (33%), Gaps = 34/314 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAF----DGMDTMVCY----ALKAN 62 + L KL +++ P ++ ++F Y +K N Sbjct: 52 IDLFKLVKELKSREINPPLIIRFNDILKDRINALHDSFLKAIKTYKYKNIYQGVFPVKCN 111 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + GS GL++ S+ EL LA ++ K I++A Sbjct: 112 QQKNVLEKIIEFGSQWNFGLEVGSKSELLIGLALLENQNSLLICNGYKDKKYIEIATLAR 171 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E E+K + Q L I R ++ S G Sbjct: 172 KLGKNPIIVIEQRDEVKRIIQAVQELKATPLIGIRAKLSSKSSGRWGKSIGDNSKFGLSI 231 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + ++ ++ + HIGSQI I A + + +L G +Q+I Sbjct: 232 PEIMLTIKELKEANLINEMKLLHFHIGSQISDIAVIKDALQEASQIYVELCKLGAPMQYI 291 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVA 281 DVGGGLGI + S +YA+ + II E GR +++ Sbjct: 292 DVGGGLGIDFDGTKTSSNTSTNYSLQNYANDVIATIKDSCELNNIKHPTIISESGRAIIS 351 Query: 282 DVGILVTKVISIKK 295 +L+ V+ Sbjct: 352 HCSVLIFNVLGTSH 365 >gi|78049594|ref|YP_365769.1| arginine decarboxylase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038024|emb|CAJ25769.1| arginine decarboxylase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 645 Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 104/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLA---HLGS 76 P + + AF Y +K N ++ V TLA G Sbjct: 76 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLAGHHGEGF 135 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 136 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTL 194 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 195 VLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADS 254 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 255 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 314 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 315 CSINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 374 Query: 300 TFVILDVAMNDFMRPTLYDA 319 + +R Sbjct: 375 RVPVAHDDEPAAIRHLREIH 394 >gi|42521980|ref|NP_967360.1| arginine decarboxylase [Bdellovibrio bacteriovorus HD100] gi|39574510|emb|CAE78014.1| arginine decarboxylase [Bdellovibrio bacteriovorus HD100] Length = 662 Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 110/321 (34%), Gaps = 28/321 (8%) Query: 28 PFYCYSTTAIEKNYLT----FSNAFDGMDTMV----CYALKANSNQAVIKTLAHLG---- 75 P I+ F AF Y +K N + +++ L G Sbjct: 88 PIMIRFPEIIKSRVELLNGCFQKAFADHGYKGQYRGVYPIKVNQQRHLVQELVKYGKDYS 147 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS----GIYCFNVESESELK 131 GL+ S+ EL LA + ++ K + I+ A+ S V+ + ELK Sbjct: 148 MGLEAGSKPELLVVLALMNTPDALIICNGFKDWEYIETAILSQKLGRNTIIVVDRKEELK 207 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + A + I FR + S+G + + + + Sbjct: 208 MIVDVAKKFNARPKIGFRAKLNTQGAGKWVDSSGARSKFGLTSTEIVEGVEFLKNEGMLD 267 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQ+ QI+S + K +L G +++IDVGGGLG+ Y Sbjct: 268 CLELLHYHIGSQVPQIQSIKSSLKEGARFYTELYKMGAGLKYIDVGGGLGVDYDGSGHSD 327 Query: 252 SSSDYASLI------------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 SS +Y+ G I+ E GRFLVA +LV V+ + Sbjct: 328 SSVNYSEQEYANDIVSVLQTLCDEKGIPHPNIVTESGRFLVAHHSVLVFNVMGVNDLHRH 387 Query: 300 TFVILDVAMNDFMRPTLYDAY 320 + + + + Sbjct: 388 EPPRPATKTDHSIMQDMQYIF 408 >gi|266619447|ref|ZP_06112382.1| alanine racemase domain protein [Clostridium hathewayi DSM 13479] gi|288869010|gb|EFD01309.1| alanine racemase domain protein [Clostridium hathewayi DSM 13479] Length = 371 Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 3/78 (3%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SG 77 ++L ++TP E+N + D + +K + + G +G Sbjct: 3 KELLDQLETPCVVIDMAKAEENVIRMQAEADAAGCRLRPHIKTHKMPLFARMQLAHGAAG 62 Query: 78 LDI--VSEGELRRALAAP 93 + VSE E+ A Sbjct: 63 ITCAKVSEAEVMADGGAD 80 >gi|163797415|ref|ZP_02191367.1| alanine racemase-like protein [alpha proteobacterium BAL199] gi|159177334|gb|EDP61891.1| alanine racemase-like protein [alpha proteobacterium BAL199] Length = 378 Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 1/72 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 A + TP A E+N + V K + + AV + H G+ G Sbjct: 13 AAAIDTPALVIDLDAFERNLDRMAKFAHDTGIRVRPHAKTHKSPAVARAQMHRGAVGQCC 72 Query: 81 VSEGELRRALAA 92 GE + A Sbjct: 73 QKVGEAEVLVQA 84 >gi|327395094|dbj|BAK12516.1| biosynthetic arginine decarboxylase SpeA [Pantoea ananatis AJ13355] Length = 659 Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 68/340 (20%), Positives = 128/340 (37%), Gaps = 32/340 (9%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L KL + P ++ + + AF D + Y +K N Sbjct: 70 VDLAKLVKEREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYTGDYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHKRVIESLVNSGEPLGLEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKI 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E T + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVLEKMTEVRMVLEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L + + + H+GSQ+ I + +L G NI+ DV Sbjct: 250 VLKLVEIMREAGRIDSLQLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIKCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGAACDEHGLEHPTVITESGRAVTAHH 369 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +LV+ +I ++++ ++ ++++ + E+ Sbjct: 370 TVLVSNIIGVERNEFSKPEAPEIEDAPRPILSMWETWQEM 409 >gi|227820182|ref|YP_002824153.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234] gi|227339181|gb|ACP23400.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234] Length = 387 Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 8/80 (10%) Query: 15 NVSLEKL----AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 + L +QTP A+E+N + + K + + V++ Sbjct: 13 GYDVPALPGMSIDEIQTPCLILDLDALERNIRKMGDYAKAHNMRHRAHGKMHKSVDVLRL 72 Query: 71 LAHLG--SGLDI--VSEGEL 86 LG G+ VSE E+ Sbjct: 73 QQELGGAIGVCCQKVSEAEV 92 >gi|90418439|ref|ZP_01226351.1| putative alanine racemase [Aurantimonas manganoxydans SI85-9A1] gi|90338111|gb|EAS51762.1| putative alanine racemase [Aurantimonas manganoxydans SI85-9A1] Length = 368 Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 23/74 (31%), Gaps = 1/74 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 V TP A+E N + + K + + + A G+ G + Sbjct: 14 EEVDTPALLVDLDALEHNLDRMAAFAASAGIRLRPHAKTHKSPVIAHWQAQRGAVGQCVQ 73 Query: 82 SEGELRRALAAPVP 95 GE A VP Sbjct: 74 KVGEAEILAWAGVP 87 >gi|332995551|gb|AEF05606.1| arginine decarboxylase [Alteromonas sp. SN2] Length = 636 Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 69/344 (20%), Positives = 119/344 (34%), Gaps = 32/344 (9%) Query: 18 LEKLAHV-VQTPFYCYSTTAIEKNYLTFSNAFDGMD--------TMVCYALKANSNQAVI 68 +E++ VQ P + + + AF Y +K N + V+ Sbjct: 50 VEEIRKEGVQFPVVVRFHDILRSQVASLNKAFRSSIEEAEYKGLYQGVYPVKVNQMREVV 109 Query: 69 KTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIY 120 + + G+ GL+ S+ EL LA + + K + + LA Sbjct: 110 EEIVEAGAPFNYGLEAGSKAELLTVLAMNTNEDSLTILNGYKDDEFMRLALLGRKLGRKI 169 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 VE SEL L + + L I R + K S+G + KFG+ I +I Sbjct: 170 VVVVEKYSELLLLVKVSKELNIDPIIGVRAKMTVKGRG-KWESSGGERAKFGLTITEIIK 228 Query: 181 LYAYASTLPG-VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y + + HIGSQ+ I + +A + L G + ++DVGGG Sbjct: 229 TARYLEEQGMSHCLKLLHFHIGSQLTDIRAVKEAMTEGARIYADLHKMGFPLDYVDVGGG 288 Query: 240 LGIAYHSDH------RPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGIL 286 LGI Y + R S +Y + + + ++ E GR + A + Sbjct: 289 LGIDYDGSNSTNESSRNYSMQEYVADVVYGMKEMCDLEGVPHPNLVSESGRAITAHHSCV 348 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 VT+++ KS + + + + N Sbjct: 349 VTEIVGEIKSNAAQIDTSENENEHVFLKNMRELSDDFENQTNMH 392 >gi|297836704|ref|XP_002886234.1| hypothetical protein ARALYDRAFT_900320 [Arabidopsis lyrata subsp. lyrata] gi|297332074|gb|EFH62493.1| hypothetical protein ARALYDRAFT_900320 [Arabidopsis lyrata subsp. lyrata] Length = 702 Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 90/258 (34%), Gaps = 26/258 (10%) Query: 15 NVSLEKLAHVV--------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYA 58 ++ L K+ V Q P ++ +AFD G Y Sbjct: 74 DIDLMKVVKKVTDPSGLGLQLPLIVRFPDVLKNRLECLQSAFDYAIQSQGYGSHYQGVYP 133 Query: 59 LKANSNQAVIKTLAHLGS----GLDIVSEGE--LRRALAAPVPAERIVFSGVGKTIDEID 112 +K N ++ +I+ + GS GL+ S+ E L + E + K + I Sbjct: 134 VKCNQDRFIIEDIVEFGSSFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFKDSEYIS 193 Query: 113 LALQSG----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 LAL +E E EL + + + + I R + H ++G+K Sbjct: 194 LALFGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG 253 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 I + + + + + HIGSQI L +L G Sbjct: 254 KFGLTTIQIVRVVRKLSQVGMLECLQLLHFHIGSQIPSTALLSDGVAEAAQLYCELVRLG 313 Query: 229 HNIQHIDVGGGLGIAYHS 246 +++ ID+GGGLGI Y Sbjct: 314 AHMKVIDIGGGLGIDYDG 331 >gi|296164218|ref|ZP_06846812.1| orn/DAP/Arg decarboxylase 2 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900424|gb|EFG79836.1| orn/DAP/Arg decarboxylase 2 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 302 Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 9/137 (6%) Query: 273 LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 LEPGR L+ G V V K+ D + + + + Sbjct: 155 LEPGRALLDGAGFTVFPVQGFKRRGDYGIITVLGLSMSLSEQWKSSEFLPDPTLWPQEAS 214 Query: 333 RL-----HIHADIVGPICETGDFIALN-RKIAL-PRPGDLLYIEKTGAYGAVQS-GTYNS 384 + + G C D + K+ PR GDLL T Y ++ ++ Sbjct: 215 DELQPAGPVRCCVGGASCLDYDMLTWRKVKLPRQPRYGDLLIYPNTAGYQMDKNESEFHG 274 Query: 385 RLLIPEIMV-NGSQFHI 400 L P++ V + + Sbjct: 275 LPLPPKLEVTRDDEGRL 291 >gi|297567482|ref|YP_003686454.1| arginine decarboxylase [Meiothermus silvanus DSM 9946] gi|296851931|gb|ADH64946.1| arginine decarboxylase [Meiothermus silvanus DSM 9946] Length = 630 Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 107/300 (35%), Gaps = 29/300 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLG---- 75 P + + + AF + Y +K N + V++T+A G Sbjct: 63 PVLLRFPQILAARVVELNEAFRRAIQKYEYKAEYRGLYPVKVNQRRIVVETIAKAGRPYA 122 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ----SGIYCFNVESESELK 131 GL+ S+ EL LA + E I+ K D I LAL +E +EL Sbjct: 123 HGLEAGSKAELALILAQDLHPEAIIACNGFKDDDFIRLALMGKKLGKNVIITLEKFAELG 182 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + A LG + I R + + S G+ I ++ A Sbjct: 183 RVMRIAKELGVEPSIGIRYKLKAKGSGQWEESGGESAKFGLTTPEIIRAVDLLAKAGMLG 242 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 I+ + H+GSQ+ I +A + + QLR G ++++++GGGL + Y Sbjct: 243 TIAMLHSHVGSQVTDIRRIKQAVREIAQTYVQLRKLGAPVRYLNLGGGLAVDYDGSKTAF 302 Query: 252 SS-------------SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + + G ++ E GR + A +LV +V+ + Sbjct: 303 YASANYTLSEYAEDLVYVTKEVCDGHGEPHPILVTESGRAITAYHSVLVLEVVDTIRPPG 362 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 13/112 (11%) Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG---DFIAL----NRK 356 + ++ + + +N +R A +V C++ D Sbjct: 460 CNFSLFQSLPDSWAIKQMFPIVPLNRLDERPTREATLVDITCDSDGKFDRFIDLHDVRNT 519 Query: 357 IA--LPRPGD--LLYIEKTGAYGAVQSGTYNSRLLIPE--IMVNGSQFHIIR 402 + RPG+ L + TGAY V ++N I E + ++ + I R Sbjct: 520 LPVHELRPGERYYLGVFLTGAYQDVLGNSHNLFGRIGEAHVTIDEDGYDIER 571 >gi|71275894|ref|ZP_00652177.1| Arginine decarboxylase [Xylella fastidiosa Dixon] gi|170729357|ref|YP_001774790.1| arginine decarboxylase [Xylella fastidiosa M12] gi|226734336|sp|B0U1H6|SPEA_XYLFM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|71163271|gb|EAO12990.1| Arginine decarboxylase [Xylella fastidiosa Dixon] gi|167964150|gb|ACA11160.1| biosynthetic arginine decarboxylase [Xylella fastidiosa M12] Length = 628 Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 61/320 (19%), Positives = 102/320 (31%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---GS 76 P + AF Y +K N ++ V LA G Sbjct: 59 PLLLRFPDILRHRLGKLQAAFVQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL LA ++ K + I LAL E + + Sbjct: 119 GLEAGSKPELMAVLALSRQG-GLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRM 177 Query: 137 AVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + K + + + + K ++G + KFG+ Q+ ++ Sbjct: 178 VLEEAKTLGVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADC 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + K + +L G I H+DVGGGLGI Y Sbjct: 238 LNVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSD 297 Query: 253 SSDYASLIHQYFGNLQ-------------CKIILEPGRFLVADVGILVTKVISIKKSADK 299 S L +Q +I+ E GR + A +L+ V ++ + Sbjct: 298 CSINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 L +R Sbjct: 358 RVPGLCDDEPAVVRHMREIY 377 >gi|291618762|ref|YP_003521504.1| SpeA [Pantoea ananatis LMG 20103] gi|291153792|gb|ADD78376.1| SpeA [Pantoea ananatis LMG 20103] Length = 663 Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 68/340 (20%), Positives = 128/340 (37%), Gaps = 32/340 (9%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L KL + P ++ + + AF D + Y +K N Sbjct: 74 VDLAKLVKEREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYTGDYFLVYPIKVN 133 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 134 QHKRVIESLVNSGEPLGLEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKI 193 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E T + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 194 GHKVYLVLEKMTEVRMVLEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQ 253 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L + + + H+GSQ+ I + +L G NI+ DV Sbjct: 254 VLKLVEIMREAGRIDSLQLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIKCFDV 313 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 314 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGAACDEHGLEHPTVITESGRAVTAHH 373 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +LV+ +I ++++ ++ ++++ + E+ Sbjct: 374 TVLVSNIIGVERNEFSKPEAPEIEDAPRPILSMWETWQEM 413 >gi|291297208|ref|YP_003508606.1| arginine decarboxylase [Meiothermus ruber DSM 1279] gi|290472167|gb|ADD29586.1| arginine decarboxylase [Meiothermus ruber DSM 1279] Length = 647 Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 69/344 (20%), Positives = 119/344 (34%), Gaps = 41/344 (11%) Query: 7 FEGSLHA-----EN--VSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGMDTM 54 +G L E SL ++ + P +E + + AF Sbjct: 47 EDGELEVTPEGAEGPSASLFEIVQDLRDEGRPLPVMLRFPQILEARVVALNEAFRRAIKK 106 Query: 55 VCY--------ALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFS 102 Y +K N + V++T+A G GL+ S+ EL LA + E I+ Sbjct: 107 YHYNASYQGLFPVKVNQRRMVVETVARAGKPFAYGLEAGSKAELALILAQDLHPESIIAC 166 Query: 103 GVGKTIDEIDLALQSG----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANT 158 K D I LAL +E +EL + + A +G + I R + Sbjct: 167 NGFKDDDFIRLALMGKKLGRNVVVTLEKFAELGRVIRIAKEIGVEPQIGIRYKLKTKGSG 226 Query: 159 HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLR 218 + S G+ I ++ A I+ + HIGSQ+ I +A + + Sbjct: 227 AWEESGGEAAKFGFTTPEIIKAVDMLAEAGLLGTIAMLHSHIGSQVTDIRRIKQAVREIA 286 Query: 219 DLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-------------SDYASLIHQYFG 265 QLR G ++++++GGGL + Y + I G Sbjct: 287 QTYVQLRKLGAPVRYLNLGGGLAVDYDGSKTAFYASANYTLEEYAEDLVYVTKEICDGHG 346 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 ++ E GR + A +LV +VI + + + + Sbjct: 347 EPHPILVTESGRAVTAYHSVLVLEVIDTIRPPGEERLEQPKDAH 390 Score = 43.7 bits (101), Expect = 0.058, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 28/150 (18%) Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET---GDFIALNRK---- 356 + ++ + T + +R A +V C++ D Sbjct: 477 CNFSLFQSLPDTWAIKQMFPIVPLTRLNERPTREATLVDITCDSDGKIDRFIDTHDVRNT 536 Query: 357 IA--LPRPGD--LLYIEKTGAYGAVQSGTYNSRLLIPE--IMVN-----------GSQFH 399 + RPG+ L + TGAY V +N I E ++V+ G + Sbjct: 537 LPVHEIRPGEPYYLGVFLTGAYQDVLGMNHNLFGRIGEAHVVVDEHGYEIERFILGEKAR 596 Query: 400 IIRPRMTFQELIELDSIPAWLQKTPKQSSE 429 + +M +++ D + ++K + S + Sbjct: 597 RVIEKMGYED----DELAEAVEKLVRSSKK 622 >gi|15836749|ref|NP_297437.1| arginine decarboxylase [Xylella fastidiosa 9a5c] gi|48474999|sp|Q9PH02|SPEA_XYLFA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|9104933|gb|AAF82957.1|AE003868_3 biosynthetic arginine decarboxylase [Xylella fastidiosa 9a5c] Length = 628 Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 102/320 (31%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---GS 76 P + AF Y +K N ++ V LA G Sbjct: 59 PLLLRFPDILGHRLGKLQAAFAQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRM 177 Query: 137 AVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + K + + + + K ++G + KFG+ Q+ ++ Sbjct: 178 VLEEAKTLGVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADC 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + K + +L G I H+DVGGGLGI Y Sbjct: 238 LNVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSD 297 Query: 253 SSDYASLIHQYFGNLQ-------------CKIILEPGRFLVADVGILVTKVISIKKSADK 299 S L +Q +I+ E GR + A +L+ V ++ + Sbjct: 298 CSINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 + +R Sbjct: 358 RVPGVCDDEPAVVRHMREIY 377 >gi|163854345|ref|YP_001628643.1| putative amino acid aldolase or racemase [Bordetella petrii DSM 12804] gi|163258073|emb|CAP40372.1| putative amino acid aldolase or racemase [Bordetella petrii] Length = 379 Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 41/135 (30%), Gaps = 2/135 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP A E N D + KA+ + + LG+ G+ Sbjct: 24 RVDTPSLVLDLDAFESNLRQMQAWADRHGVALRPHAKAHKCPEIARRQLALGARGICCQK 83 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E +AA + + + + V LA + +V + + A Sbjct: 84 VSEALPFVAAGID-DVHISNEVVGAAKLALLAQLARAARVSVCVDDAGNLADISAAMARA 142 Query: 143 KAPIAFRVNPDINAN 157 +A + V D+ Sbjct: 143 QAQVEVLVELDVGQG 157 >gi|156046673|ref|XP_001589715.1| hypothetical protein SS1G_09437 [Sclerotinia sclerotiorum 1980] gi|154693832|gb|EDN93570.1| hypothetical protein SS1G_09437 [Sclerotinia sclerotiorum 1980 UF-70] Length = 135 Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 36/89 (40%) Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +K NS+ ++ L LG+G D S E+ L+ I F+ K + + A + G Sbjct: 3 VKCNSDTVLLNVLMQLGAGFDCASVEEMHTVLSLGTHPSSINFANPCKAPESLAFAYKVG 62 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIA 147 I ++ EL + + + I Sbjct: 63 IRKTTFDNLDELDNIKKYMPNAQLLLRIY 91 >gi|308188031|ref|YP_003932162.1| biosynthetic arginine decarboxylase [Pantoea vagans C9-1] gi|308058541|gb|ADO10713.1| biosynthetic arginine decarboxylase [Pantoea vagans C9-1] Length = 658 Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 68/347 (19%), Positives = 121/347 (34%), Gaps = 32/347 (9%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L +L + P ++ + + AF D + Y +K N Sbjct: 70 VDLARLVKEREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L H G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHKRVIESLIHSGEPLGLEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKM 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E T + + + + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVLEKMTEVRLVLEEAGRLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L + + + H+GSQ+ I + +L G NI+ DV Sbjct: 250 VLKLVEIMREAGRIDSLQLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIKCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQY-------FGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWAIGAACDEHGLDHPTVITESGRAVTAHH 369 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 +LV+ +I ++++ D + + Sbjct: 370 TVLVSNIIGVERNEFSEPETPDADAPRPILSMWETWQEMHEPDTRRS 416 >gi|28198049|ref|NP_778363.1| arginine decarboxylase [Xylella fastidiosa Temecula1] gi|182680677|ref|YP_001828837.1| arginine decarboxylase [Xylella fastidiosa M23] gi|48474405|sp|Q87F25|SPEA_XYLFT RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|226734335|sp|B2I6M1|SPEA_XYLF2 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|28056109|gb|AAO28012.1| biosynthetic arginine decarboxylase [Xylella fastidiosa Temecula1] gi|182630787|gb|ACB91563.1| arginine decarboxylase [Xylella fastidiosa M23] gi|307579138|gb|ADN63107.1| arginine decarboxylase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 628 Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 102/320 (31%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---GS 76 P + AF Y +K N ++ V LA G Sbjct: 59 PLLLRFPDILGHRLGKLQAAFAQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRM 177 Query: 137 AVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + K + + + + K ++G + KFG+ Q+ ++ Sbjct: 178 VLEEAKTLDVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADC 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + K + +L G I H+DVGGGLGI Y Sbjct: 238 LNVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSD 297 Query: 253 SSDYASLIHQYFGNLQ-------------CKIILEPGRFLVADVGILVTKVISIKKSADK 299 S L +Q +I+ E GR + A +L+ V ++ + Sbjct: 298 CSINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 + +R Sbjct: 358 RVPGVCDDEPAVVRHMREIY 377 >gi|71899268|ref|ZP_00681430.1| Arginine decarboxylase [Xylella fastidiosa Ann-1] gi|71731001|gb|EAO33070.1| Arginine decarboxylase [Xylella fastidiosa Ann-1] Length = 628 Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 102/320 (31%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---GS 76 P + AF Y +K N ++ V LA G Sbjct: 59 PLLLRFPDILGHRLGKLQAAFAQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRM 177 Query: 137 AVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + K + + + + K ++G + KFG+ Q+ ++ Sbjct: 178 VLEEAKTLDVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADC 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + K + +L G I H+DVGGGLGI Y Sbjct: 238 LNVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSD 297 Query: 253 SSDYASLIHQYFGNLQ-------------CKIILEPGRFLVADVGILVTKVISIKKSADK 299 S L +Q +I+ E GR + A +L+ V ++ + Sbjct: 298 CSINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 + +R Sbjct: 358 RVPGVCDDEPAVVRHMREIY 377 >gi|301119305|ref|XP_002907380.1| ornithine decarboxylase, putative [Phytophthora infestans T30-4] gi|262105892|gb|EEY63944.1| ornithine decarboxylase, putative [Phytophthora infestans T30-4] Length = 298 Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 13/33 (39%) Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVN 394 GD + GAY T+N L E+ V Sbjct: 250 VGDWIAFPSMGAYSFATGSTFNGFSLHGELRVK 282 >gi|22127189|ref|NP_670612.1| arginine decarboxylase [Yersinia pestis KIM 10] gi|45443251|ref|NP_994790.1| arginine decarboxylase [Yersinia pestis biovar Microtus str. 91001] gi|51597512|ref|YP_071703.1| arginine decarboxylase [Yersinia pseudotuberculosis IP 32953] gi|108806333|ref|YP_650249.1| arginine decarboxylase [Yersinia pestis Antiqua] gi|108813286|ref|YP_649053.1| arginine decarboxylase [Yersinia pestis Nepal516] gi|145597893|ref|YP_001161969.1| arginine decarboxylase [Yersinia pestis Pestoides F] gi|149367061|ref|ZP_01889094.1| biosynthetic arginine decarboxylase [Yersinia pestis CA88-4125] gi|153949410|ref|YP_001399827.1| arginine decarboxylase [Yersinia pseudotuberculosis IP 31758] gi|162420874|ref|YP_001607692.1| arginine decarboxylase [Yersinia pestis Angola] gi|165924887|ref|ZP_02220719.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165937215|ref|ZP_02225779.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Orientalis str. IP275] gi|166010228|ref|ZP_02231126.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166212645|ref|ZP_02238680.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua str. B42003004] gi|167399921|ref|ZP_02305439.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421979|ref|ZP_02313732.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426717|ref|ZP_02318470.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470378|ref|ZP_02335082.1| biosynthetic arginine decarboxylase [Yersinia pestis FV-1] gi|170023094|ref|YP_001719599.1| arginine decarboxylase [Yersinia pseudotuberculosis YPIII] gi|186896633|ref|YP_001873745.1| arginine decarboxylase [Yersinia pseudotuberculosis PB1/+] gi|218928102|ref|YP_002345977.1| arginine decarboxylase [Yersinia pestis CO92] gi|229837618|ref|ZP_04457780.1| arginine decarboxylase [Yersinia pestis Pestoides A] gi|229840845|ref|ZP_04461004.1| arginine decarboxylase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842595|ref|ZP_04462750.1| arginine decarboxylase [Yersinia pestis biovar Orientalis str. India 195] gi|229903746|ref|ZP_04518859.1| arginine decarboxylase [Yersinia pestis Nepal516] gi|270487526|ref|ZP_06204600.1| arginine 2-monooxygenase [Yersinia pestis KIM D27] gi|294502907|ref|YP_003566969.1| arginine decarboxylase [Yersinia pestis Z176003] gi|46397734|sp|Q8ZHG8|SPEA_YERPE RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|21960254|gb|AAM86863.1|AE013932_6 biosynthetic arginine decarboxylase [Yersinia pestis KIM 10] gi|45438119|gb|AAS63667.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Microtus str. 91001] gi|51590794|emb|CAH22440.1| Biosynthetic arginine decarboxylase [Yersinia pseudotuberculosis IP 32953] gi|108776934|gb|ABG19453.1| arginine decarboxylase [Yersinia pestis Nepal516] gi|108778246|gb|ABG12304.1| arginine decarboxylase [Yersinia pestis Antiqua] gi|115346713|emb|CAL19596.1| biosynthetic arginine decarboxylase [Yersinia pestis CO92] gi|145209589|gb|ABP38996.1| arginine decarboxylase [Yersinia pestis Pestoides F] gi|149290675|gb|EDM40751.1| biosynthetic arginine decarboxylase [Yersinia pestis CA88-4125] gi|152960905|gb|ABS48366.1| biosynthetic arginine decarboxylase [Yersinia pseudotuberculosis IP 31758] gi|162353689|gb|ABX87637.1| biosynthetic arginine decarboxylase [Yersinia pestis Angola] gi|165914689|gb|EDR33302.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Orientalis str. IP275] gi|165923087|gb|EDR40238.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990714|gb|EDR43015.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205937|gb|EDR50417.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960116|gb|EDR56137.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050629|gb|EDR62037.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054320|gb|EDR64139.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749628|gb|ACA67146.1| arginine decarboxylase [Yersinia pseudotuberculosis YPIII] gi|186699659|gb|ACC90288.1| arginine decarboxylase [Yersinia pseudotuberculosis PB1/+] gi|229679516|gb|EEO75619.1| arginine decarboxylase [Yersinia pestis Nepal516] gi|229690905|gb|EEO82959.1| arginine decarboxylase [Yersinia pestis biovar Orientalis str. India 195] gi|229697211|gb|EEO87258.1| arginine decarboxylase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704306|gb|EEO91317.1| arginine decarboxylase [Yersinia pestis Pestoides A] gi|262360942|gb|ACY57663.1| arginine decarboxylase [Yersinia pestis D106004] gi|262364882|gb|ACY61439.1| arginine decarboxylase [Yersinia pestis D182038] gi|270336030|gb|EFA46807.1| arginine 2-monooxygenase [Yersinia pestis KIM D27] gi|294353366|gb|ADE63707.1| arginine decarboxylase [Yersinia pestis Z176003] gi|320013991|gb|ADV97562.1| arginine decarboxylase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 659 Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 67/363 (18%), Positives = 126/363 (34%), Gaps = 38/363 (10%) Query: 16 VSLEKLAHVVQT------PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L +L +Q P ++ + + AF + Y +K Sbjct: 70 VDLAQLVKKMQLEQGQRLPALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKV 129 Query: 62 NSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 N ++ VI++L + G GL+ S+ E+ LA ++ K + I LAL Sbjct: 130 NQHRRVIESLVNSGEPLGLEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEK 189 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIH 176 V E + + + ++ + R+ + + K ++G ++ KFG+ Sbjct: 190 LGHKVYLVIEKMSEIKMVLEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSAT 249 Query: 177 QIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q+ L ++ + + H+GSQ+ I + +L G NIQ D Sbjct: 250 QVLQLVDMLREANSLESLQLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFD 309 Query: 236 VGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVAD 282 VGGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 VGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAH 369 Query: 283 VGILVTKVISIKKSADKTFV-----ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH 337 +LV+ VI ++++ + + + D Sbjct: 370 HTVLVSNVIGVERNEFCEPQPPEAGAPRALESLWDTWQEMQEPENRRSLREWLHDSQMDL 429 Query: 338 ADI 340 D+ Sbjct: 430 HDV 432 >gi|194476838|ref|YP_002049017.1| arginine decarboxylase [Paulinella chromatophora] gi|171191845|gb|ACB42807.1| arginine decarboxylase [Paulinella chromatophora] Length = 640 Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 70/342 (20%), Positives = 115/342 (33%), Gaps = 31/342 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LKANSNQAVIKTLAHLG---- 75 P + +E +N+F YA +K N + +++ L G Sbjct: 67 PLLIHFDDILEHRLNQLNNSFRKAIKKYDYAGCYQGVFPVKCNQQRHLLEHLVESGRSWN 126 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIYCFNVESESELK 131 GL++ S+ EL AL+ + ++ K I+ A +E EL Sbjct: 127 FGLEVGSKAELLIALSLLDNPKALLICNGYKDQRYIETAILARRLGRQPVIVIEQADELY 186 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + LG I R + T + S+ + KFG+ I +I + + Sbjct: 187 RIVAASRILGASPLIGIRAKLSTRS-TGRWGSSVGEMAKFGLAIPEIKTAVEKLREANLL 245 Query: 192 K-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH-- 248 + + HIGSQI I A + + QL G + ++DVGGGLGI Y Sbjct: 246 NSLCLLHFHIGSQISDIAVLKDALQEAGQIYVQLVQLGAPMGYLDVGGGLGIDYDGSRTA 305 Query: 249 ----RPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 S +YA+ + II E GR + + +L+ V+ + Sbjct: 306 TAASTNYSLQNYANDVVATVKECCLSHSIKLPTIITESGRAIASHCSVLIFNVLGVGSVP 365 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 I D A + D L D Sbjct: 366 AGIPAIADKEPLTVCNLRHTLANINCGNLQEMWNDALKFKED 407 >gi|149915930|ref|ZP_01904454.1| alanine racemase-like protein [Roseobacter sp. AzwK-3b] gi|149810253|gb|EDM70099.1| alanine racemase-like protein [Roseobacter sp. AzwK-3b] Length = 387 Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 29/94 (30%), Gaps = 10/94 (10%) Query: 1 MSAFKYFEGSLHAENVSLEKLA----HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVC 56 M+ L + L +QTP A+E+N + Sbjct: 1 MNDMSNI-HELEV-GFDIPALPGMDEADIQTPCLVLDLDALERNIRKMGDYAKAHGMRHR 58 Query: 57 YALKANSNQAVIKTLAHLG--SGLDI--VSEGEL 86 K + + V K LG G+ VSE E+ Sbjct: 59 VHGKMHKSVDVAKLQVELGGACGVCCQKVSEAEV 92 >gi|304396746|ref|ZP_07378626.1| arginine decarboxylase [Pantoea sp. aB] gi|304355542|gb|EFM19909.1| arginine decarboxylase [Pantoea sp. aB] Length = 658 Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 68/347 (19%), Positives = 122/347 (35%), Gaps = 32/347 (9%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L +L + P ++ + + AF D + Y +K N Sbjct: 70 VDLARLVKEREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L H G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHKRVIESLIHSGEPLGLEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKM 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E T + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVLEKMTEVRLVLEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L + + + H+GSQ+ I + +L G NI+ DV Sbjct: 250 VLKLVEIMREAGRIDSLQLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIKCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQY-------FGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWAIGAACDEHGLEHPTVITESGRAVTAHH 369 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 +LV+ +I ++++ D + + Sbjct: 370 TVLVSNIIGVERNEFSEPETPDADAPRPILSMWETWQEMHEPSTRRS 416 >gi|259909599|ref|YP_002649955.1| arginine decarboxylase [Erwinia pyrifoliae Ep1/96] gi|224965221|emb|CAX56753.1| Biosynthetic arginine decarboxylase [Erwinia pyrifoliae Ep1/96] Length = 658 Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 71/362 (19%), Positives = 127/362 (35%), Gaps = 37/362 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L KL + P ++ + + AF D + Y +K N Sbjct: 70 VDLAKLVKEREAEGQRLPALFCFPQILQHRLRSINAAFKRACESYGYNGDYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHKRVIESLINSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKM 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E T + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVLEKMTEVKLVLEEAERLNVIPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L V+ + + H+GSQ+ I + +L G NIQ DV Sbjct: 250 VLKLVEIMREAGRVESLQLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQY-------FGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + +I E GR + A Sbjct: 310 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWAIGAACDEHDLPHPTVITESGRAVTAHH 369 Query: 284 GILVTKVISIKKSADKTFV-----ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +LV+ +I ++++ ++ + + + D Sbjct: 370 TVLVSNIIGVERNEFSEPQPPVEDAPRPIVSMWDTWQEMHEPNNRRSLREWLHDSQMDLF 429 Query: 339 DI 340 DI Sbjct: 430 DI 431 >gi|218440951|ref|YP_002379280.1| arginine decarboxylase [Cyanothece sp. PCC 7424] gi|218173679|gb|ACK72412.1| arginine decarboxylase [Cyanothece sp. PCC 7424] Length = 679 Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 99/329 (30%), Gaps = 36/329 (10%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTLAHLG---- 75 P + + + F Y +K N ++ ++++L G Sbjct: 95 PLLIRFSDILADRIERLNACFAKAIARYNYPNVYRGVYPIKCNQHRHIVESLVRYGKPYH 154 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSG-----------VGKTIDEIDLALQSGIYCFNV 124 GL+ S+ EL ALA P + + + Sbjct: 155 FGLEAGSKPELMIALATLEPVANPQNNQFPLLICNGYKDQEYIETALLATRLGQRPIIVI 214 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 E E+ + + + K + R S G + + + Sbjct: 215 EQLEEVDLILKISRQFEIKPIVGVRAKLSSKGIGRWGNSAGDRAKFGLTIPEILTVVNRL 274 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 + + + HIGSQI I A + + +L G ++Q++DVGGGLG+ Y Sbjct: 275 EACQMLDCLQLLHFHIGSQISSISVIKDAIREAAQIYGELVKLGAHMQYLDVGGGLGVDY 334 Query: 245 HSDHRPPSSSDYASLIHQYF-------------GNLQCKIILEPGRFLVADVGILVTKVI 291 +S ++ + ++ E GR + A +L+ V+ Sbjct: 335 DGSKTNFYASKNYNMQNYANDIVAEVKEACEERNITAPVLVSESGRAIAAHHSVLIFDVL 394 Query: 292 SIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + + ++ + +R Sbjct: 395 GTNEVPRTPPIAVEEKEHLIIRNLRETYN 423 >gi|283479676|emb|CAY75592.1| arginine decarboxylase [Erwinia pyrifoliae DSM 12163] Length = 675 Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 71/362 (19%), Positives = 127/362 (35%), Gaps = 37/362 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L KL + P ++ + + AF D + Y +K N Sbjct: 87 VDLAKLVKEREAEGQRLPALFCFPQILQHRLRSINAAFKRACESYGYNGDYFLVYPIKVN 146 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 147 QHKRVIESLINSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKM 206 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E T + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 207 GHKVYLVLEKMTEVKLVLEEAERLNVIPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQ 266 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L V+ + + H+GSQ+ I + +L G NIQ DV Sbjct: 267 VLKLVEIMREAGRVESLQLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDV 326 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQY-------FGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + +I E GR + A Sbjct: 327 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWAIGAACDEHDLPHPTVITESGRAVTAHH 386 Query: 284 GILVTKVISIKKSADKTFV-----ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +LV+ +I ++++ ++ + + + D Sbjct: 387 TVLVSNIIGVERNEFSEPQPPVEDAPRPIVSMWDTWQEMHEPNNRRSLREWLHDSQMDLF 446 Query: 339 DI 340 DI Sbjct: 447 DI 448 >gi|67551182|gb|AAY68498.1| MccE [Escherichia coli] Length = 508 Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 90/290 (31%), Gaps = 20/290 (6%) Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAY 184 ++ E K LN+ I R++ + N + + + + Sbjct: 43 DNIDECKRLNELCKLHKLTCRIHLRLSHYYDDNLSRFGLSESEAINLLEML--------- 93 Query: 185 ASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 S + + G +H+GS + E KA +L + + + + Sbjct: 94 ISKSEYLILDGFHLHVGSNLPNAEKICKAVIQYHELILRYMPDDGTLNLGSGIPADSFSA 153 Query: 245 HSDHRPPSSSDYA------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 SD+ P + + I EPGR LV D G + KVIS K Sbjct: 154 SSDNPTPCPEVFFSSIYDTIKNCFGTVCDKWNYIFEPGRHLVEDFGYFIGKVISTKNRYG 213 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 ++ +N +D + + N D I G C D + + + Sbjct: 214 VKVAQTNIGINWIPSIRNWDHSFTLFHNHNHISDDKSDEYIIAGFNCFECDCLFPSVILP 273 Query: 359 LPRPGDLLY-IEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHI--IRPRM 405 D L+ + GAY + +R L + +I I R Sbjct: 274 S-NLSDYLFSVRGCGAYDMQTGNQW-TRNLYAVYTITNDVVNISRIHRRE 321 >gi|81299846|ref|YP_400054.1| arginine decarboxylase [Synechococcus elongatus PCC 7942] gi|81168727|gb|ABB57067.1| arginine decarboxylase [Synechococcus elongatus PCC 7942] Length = 647 Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 83/241 (34%), Gaps = 16/241 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LKANSNQAVIKTLAHLG---- 75 P +E + F YA +K N + +I++L + G Sbjct: 76 PLLIRFPDILEDRIERLNACFAKAIARYNYAGEYRGVFPVKCNQQRHLIESLVNYGRPFQ 135 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIYCFNVESESELK 131 GL+ S+ EL ALA ++ K D I+ A +E E+ Sbjct: 136 FGLEAGSKPELLIALAHLDTPGALLICNGYKDRDYIETAILGRRLGKTPILVIEQLEEVD 195 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + LG + + R + S G + + ++ + Sbjct: 196 VAIAASQRLGIEPILGVRAKLNARGMGRWGSSAGDRAKFGLTMPEIVAAVEKLQAANLLH 255 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI I A + + QL + G +++++DVGGGLG+ Y Sbjct: 256 CLQLLHFHIGSQISDISVLKDAIQEAAQIYVQLAALGADMRYLDVGGGLGVDYDGSKTNF 315 Query: 252 S 252 Sbjct: 316 H 316 >gi|71901303|ref|ZP_00683400.1| Orn/DAP/Arg decarboxylase 2 [Xylella fastidiosa Ann-1] gi|71728923|gb|EAO31057.1| Orn/DAP/Arg decarboxylase 2 [Xylella fastidiosa Ann-1] Length = 444 Score = 50.2 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 61/320 (19%), Positives = 102/320 (31%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---GS 76 P + AF Y +K N ++ V LA G Sbjct: 59 PLLLRFPDILRHRLGKLQAAFVQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL LA ++ K + I LAL E + + Sbjct: 119 GLEAGSKPELMAVLALSRQG-GLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRM 177 Query: 137 AVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + K + + + + K ++G + KFG+ Q+ ++ Sbjct: 178 VLEEAKTLGVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADC 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + K + +L G I H+DVGGGLGI Y Sbjct: 238 LNVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSD 297 Query: 253 SSDYASLIHQYFGNLQ-------------CKIILEPGRFLVADVGILVTKVISIKKSADK 299 S L +Q +I+ E GR + A +L+ V ++ + Sbjct: 298 CSINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 L +R Sbjct: 358 RVPGLCDDEPAVVRHMREIY 377 >gi|284041650|ref|YP_003391990.1| alanine racemase domain protein [Conexibacter woesei DSM 14684] gi|283945871|gb|ADB48615.1| alanine racemase domain protein [Conexibacter woesei DSM 14684] Length = 372 Score = 50.2 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 19/71 (26%), Gaps = 1/71 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIV 81 V TP + N + + K + V + G +GL + Sbjct: 4 DAVDTPALVVDRDVLRANVEAMAALARDAGVALRPHAKTHKLPQVARMQLDAGAAGLTVA 63 Query: 82 SEGELRRALAA 92 GE A Sbjct: 64 KLGEAEVFADA 74 >gi|126695386|ref|YP_001090272.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9301] gi|166220850|sp|A3PA96|SPEA_PROM0 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|126542429|gb|ABO16671.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str. MIT 9301] Length = 648 Score = 50.2 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 106/314 (33%), Gaps = 34/314 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAF----DGMDTMVCY----ALKAN 62 + L KL +++ P ++ ++F Y +K N Sbjct: 52 IDLFKLVKELKSREINPPLIIRFNDILKDRINALHDSFFKAIKTYKYKNIYQGVFPVKCN 111 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 + V++ + GS GL++ S+ EL LA ++ K I++A Sbjct: 112 QQKNVLEKIIDFGSQWNFGLEVGSKSELLIGLALLENHNSLLICNGYKDKKYIEIATLAR 171 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E E+K + Q L I R ++ S G Sbjct: 172 KLGKNPIIVIEQRDEVKRIIQAVQELNATPLIGIRAKLSSKSSGRWGKSIGDNSKFGLSI 231 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + ++ ++ + HIGSQI I A + + +L G +Q+I Sbjct: 232 PEIMLTIKELKEANLINEMKLLHFHIGSQISDIAVIKDALQEASQIYVELCKLGAPMQYI 291 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVA 281 DVGGGLGI + S +YA+ + II E GR +++ Sbjct: 292 DVGGGLGIDFDGTKTSSNTSTNYSLQNYANDVIATIKDSCELNNIKHPTIISESGRAIIS 351 Query: 282 DVGILVTKVISIKK 295 +L+ V+ Sbjct: 352 HCSVLIFNVLGTSH 365 >gi|157372207|ref|YP_001480196.1| arginine decarboxylase [Serratia proteamaculans 568] gi|157323971|gb|ABV43068.1| arginine decarboxylase [Serratia proteamaculans 568] Length = 658 Score = 50.2 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 66/309 (21%), Positives = 113/309 (36%), Gaps = 32/309 (10%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L L ++ P ++ + + AF + Y +K N Sbjct: 70 VDLADLVKQRQKDGLRLPALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHRRVIESLVNSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKL 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVIEKMSEINMVLEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L + + + H+GSQ+ I + +L G NIQ DV Sbjct: 250 VLKLVETLREAGRLDSLQLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAHH 369 Query: 284 GILVTKVIS 292 +LV+ VI Sbjct: 370 TVLVSNVIG 378 >gi|290476618|ref|YP_003469523.1| arginine decarboxylase, PLP-binding, biosynthetic [Xenorhabdus bovienii SS-2004] gi|289175956|emb|CBJ82759.1| arginine decarboxylase, PLP-binding, biosynthetic [Xenorhabdus bovienii SS-2004] Length = 634 Score = 50.2 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 70/315 (22%), Positives = 118/315 (37%), Gaps = 34/315 (10%) Query: 16 VSLEKLAHVVQ-------TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALK 60 V L +L VQ P ++ + + AF D + Y +K Sbjct: 44 VELTELVKKVQEEKKQLRLPSLFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIK 103 Query: 61 ANSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 N + VI++LA+ G GL+ S+ EL LA ++ K + I LAL Sbjct: 104 VNQQRRVIESLANAGEPIGLEAGSKAELMAVLAHAGMTRTVIVCNGYKDREYIRLALIGE 163 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPI 175 V E + + ++ + R+ + K S+G ++ KFG+ Sbjct: 164 KLGHKVYLVIEKMSEIAMVLEEAERLSVIPRLGVRARLASQGAGKWQSSGGEKSKFGLAA 223 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 Q+ L + + + + H+GSQ+ I + +L G NIQ Sbjct: 224 AQVLQLVETLRSAGKLNSLQLLHFHLGSQLANIRDVATGVRESARFYVELHKLGVNIQCF 283 Query: 235 DVGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVA 281 DVGGGLG+ Y ++YA+ + G +I E GR L A Sbjct: 284 DVGGGLGVDYEGTRSQSECSVNYGLNEYANNVIWGIGDACEEHGLPHPTVITESGRALTA 343 Query: 282 DVGILVTKVISIKKS 296 +L++ VI ++ + Sbjct: 344 HHTVLISNVIGVEHN 358 >gi|56750519|ref|YP_171220.1| arginine decarboxylase [Synechococcus elongatus PCC 6301] gi|56685478|dbj|BAD78700.1| arginine decarboxylase [Synechococcus elongatus PCC 6301] Length = 651 Score = 50.2 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 83/241 (34%), Gaps = 16/241 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LKANSNQAVIKTLAHLG---- 75 P +E + F YA +K N + +I++L + G Sbjct: 80 PLLIRFPDILEDRIERLNACFAKAIARYNYAGEYRGVFPVKCNQQRHLIESLVNYGRPFQ 139 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIYCFNVESESELK 131 GL+ S+ EL ALA ++ K D I+ A +E E+ Sbjct: 140 FGLEAGSKPELLIALAHLDTPGALLICNGYKDRDYIETAILGRRLGKTPILVIEQLEEVD 199 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + LG + + R + S G + + ++ + Sbjct: 200 VAIAASQRLGIEPILGVRAKLNARGMGRWGSSAGDRAKFGLTMPEIVAAVEELQAANLLH 259 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI I A + + QL + G +++++DVGGGLG+ Y Sbjct: 260 CLQLLHFHIGSQISDISVLKDAIQEAAQIYVQLAALGADMRYLDVGGGLGVDYDGSKTNF 319 Query: 252 S 252 Sbjct: 320 H 320 >gi|1620470|emb|CAA65422.1| arginine decarboxylase [Synechocystis sp. PCC 6803] Length = 302 Score = 50.2 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 17/100 (17%) Query: 14 ENVSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALK 60 ++ L +L + P + + ++ F Y +K Sbjct: 60 GSLDLLELVEALRQRKLGLPLLIRFSDILADRLERLNSCFAKAIARYNYPNTYQAVYPVK 119 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPA 96 N + +++ L G GL+ S+ EL ALA P Sbjct: 120 CNQQRHLVEALVRFGQTSQCGLEAGSKPELMIALATLPPP 159 >gi|332162797|ref|YP_004299374.1| arginine decarboxylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604363|emb|CBY25861.1| biosynthetic arginine decarboxylase [Yersinia enterocolitica subsp. palearctica Y11] gi|325667027|gb|ADZ43671.1| arginine decarboxylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860342|emb|CBX70654.1| biosynthetic arginine decarboxylase [Yersinia enterocolitica W22703] Length = 659 Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 117/310 (37%), Gaps = 33/310 (10%) Query: 16 VSLEKLAHVVQT------PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L +L +Q P ++ + + AF D + Y +K Sbjct: 70 VDLAELVKKMQLEQGQRLPALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKV 129 Query: 62 NSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 N ++ VI++L + G GL+ S+ E+ LA ++ K + I LAL Sbjct: 130 NQHRRVIESLVNSGEPLGLEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEK 189 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIH 176 V E + + + ++ + R+ + + K ++G ++ KFG+ Sbjct: 190 LGHKVYLVIEKMSEIKMVLEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSAT 249 Query: 177 QIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q+ L ++ + + H+GSQ+ I + +L G NIQ D Sbjct: 250 QVLQLVDMLRDANSLESLQLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFD 309 Query: 236 VGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVAD 282 VGGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 VGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAH 369 Query: 283 VGILVTKVIS 292 +LV+ VI Sbjct: 370 HTVLVSNVIG 379 >gi|34498331|ref|NP_902546.1| arginine decarboxylase [Chromobacterium violaceum ATCC 12472] gi|48474350|sp|Q7NU27|SPEA_CHRVO RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|34104185|gb|AAQ60544.1| arginine decarboxylase [Chromobacterium violaceum ATCC 12472] Length = 626 Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 66/315 (20%), Positives = 113/315 (35%), Gaps = 32/315 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 + L +L + P ++ AFD G Y +K N Sbjct: 42 IDLYRLVRDLGGKGLDLPLLVRFPDILQDRVTRLCGAFDKAIAEQGYGNRYTAIYPIKVN 101 Query: 63 SNQAVIKTL---AHLGSGLDIVSEGELRRALAAPVPAERIVFS---GVGKTIDEIDLALQ 116 +AV+K++ + GL+ S+ EL LA IV + + Sbjct: 102 QQEAVVKSIIATQDVSIGLEAGSKPELMAVLALAPKGCTIVCNGYKDREFIRLALIGERL 161 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 +E ESE+ + + + L + I RV A++ + G+K Sbjct: 162 GHQVFIVIEKESEVDLVIEESRKLEVRPNIGLRVRLSSLASSKWSDTGGEKGKFGLSAGQ 221 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 I + + G + + H+GSQI I + F+ +LR+ G + H+DV Sbjct: 222 LISATDKLIAAGLGDCVRLMHFHMGSQIANIADYRLGFREAIRYFAELRALGLPVDHVDV 281 Query: 237 GGGLGIAYHSDH------RPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADV 283 GGGLG+ Y H ++YA G +I+ E GR + A Sbjct: 282 GGGLGVDYDGTHSRNDSSINYDMAEYAHVIVSMLSEFCAENGIPHPRILSESGRAMTAHH 341 Query: 284 GILVTKVISIKKSAD 298 +L+ V +++ D Sbjct: 342 AVLLMNVTDVERLPD 356 >gi|325927339|ref|ZP_08188593.1| arginine decarboxylase [Xanthomonas perforans 91-118] gi|325542340|gb|EGD13828.1| arginine decarboxylase [Xanthomonas perforans 91-118] Length = 628 Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 103/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLA---HLGS 76 P + + AF Y +K N ++ V TLA G Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLAGHHGEGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTL 177 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 178 VLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADS 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 238 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 297 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 298 CSINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 358 RVPDAHDDEPAAIRHLREIH 377 >gi|123443613|ref|YP_001007585.1| arginine decarboxylase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090574|emb|CAL13443.1| biosynthetic arginine decarboxylase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 659 Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 117/310 (37%), Gaps = 33/310 (10%) Query: 16 VSLEKLAHVVQT------PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L +L +Q P ++ + + AF D + Y +K Sbjct: 70 VDLAELVKKMQLEQGQRLPALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKV 129 Query: 62 NSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 N ++ VI++L + G GL+ S+ E+ LA ++ K + I LAL Sbjct: 130 NQHRRVIESLVNSGEPLGLEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEK 189 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIH 176 V E + + + ++ + R+ + + K ++G ++ KFG+ Sbjct: 190 LGHKVYLVIEKMSEIKMVLEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSAT 249 Query: 177 QIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q+ L ++ + + H+GSQ+ I + +L G NIQ D Sbjct: 250 QVLQLVDMLRDANSLESLQLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFD 309 Query: 236 VGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVAD 282 VGGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 VGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAH 369 Query: 283 VGILVTKVIS 292 +LV+ VI Sbjct: 370 HTVLVSNVIG 379 >gi|322834222|ref|YP_004214249.1| arginine decarboxylase [Rahnella sp. Y9602] gi|321169423|gb|ADW75122.1| arginine decarboxylase [Rahnella sp. Y9602] Length = 660 Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 120/330 (36%), Gaps = 27/330 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLG--SG 77 P ++ + + AF D + Y +K N ++ VI++L G G Sbjct: 88 PALFCFPQILQHRLRSINAAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVESGEPLG 147 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 L+ S+ EL LA ++ K + I LAL V E T + Sbjct: 148 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMTEIKLV 207 Query: 138 VSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK-I 193 + ++ + R+ + + K S+G ++ KFG+ Q+ L ++ + Sbjct: 208 LEEAERLNVIPRLGVRARLSSQGSGKWQSSGGEKSKFGLAASQVLQLVEMLREAGRLESL 267 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + H+GSQ+ I + +L G NIQ DVGGGLG+ Y Sbjct: 268 QLLHFHLGSQLANIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 254 ------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 ++YA+ + G +I E GR + A +LV+ VI ++++ K Sbjct: 328 SVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAHHTVLVSNVIGVERNEFKE 387 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 V + + + + Sbjct: 388 PVAPEDDAPRALGSMWDTWNEMHDPENRRS 417 >gi|295688285|ref|YP_003591978.1| alanine racemase domain-containing protein [Caulobacter segnis ATCC 21756] gi|295430188|gb|ADG09360.1| alanine racemase domain protein [Caulobacter segnis ATCC 21756] Length = 401 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 1/65 (1%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEG 84 QTP A+E+N D + K + + + + G+ GL + G Sbjct: 11 QTPLLVVDRAALERNIDRMQALCDAAGVRLRAHGKTHKCSTLGRLIVARGAVGLCCQTVG 70 Query: 85 ELRRA 89 E Sbjct: 71 EAEAY 75 >gi|220909300|ref|YP_002484611.1| arginine decarboxylase [Cyanothece sp. PCC 7425] gi|219865911|gb|ACL46250.1| arginine decarboxylase [Cyanothece sp. PCC 7425] Length = 655 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 98/287 (34%), Gaps = 25/287 (8%) Query: 14 ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LK 60 ++ L +L + + P T +E + F YA +K Sbjct: 66 GSLDLFELVNALKLRNIGLPLLLRFTDILEDRIERLNACFAKAIARYNYAGNYRGVFPVK 125 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 N + +I+ L G GL+ S+ EL ALA ++ K + I+ A+ Sbjct: 126 CNQQRHLIEDLVRFGKPHQFGLEAGSKPELLIALATLNTPGALMICNGYKDREYIETAIL 185 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA-----NTHKKISTGKKEDKF 171 + E + + + + + + A + ++ KF Sbjct: 186 ARRLGQTCIIVLE--QIEEIPLVIAISRRLGIEPILGVRAKLSTKGIGRWGTSAGDRAKF 243 Query: 172 GIPIHQIHSLYAYASTLPG-VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 G+ + +I + + + + HIGSQI I A + + +L G Sbjct: 244 GLTVPEILTAVEELRSAGMLHCLQLLHFHIGSQISAIGVIKDALREASQIYVELVRLGAK 303 Query: 231 IQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGR 277 +Q++DVGGGLG+ Y +S S+ + + R Sbjct: 304 MQYLDVGGGLGVDYDGSKTNFHASKNYSMQNYANDVVAEIKEACAAR 350 >gi|167646643|ref|YP_001684306.1| alanine racemase domain-containing protein [Caulobacter sp. K31] gi|167349073|gb|ABZ71808.1| alanine racemase domain protein [Caulobacter sp. K31] Length = 383 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 1/62 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP A+E+N + + K + + + K G+ GL GE Sbjct: 22 TPVLVIDRPALERNIARMARFAADKGVKLRPHAKTHKSVDIAKLQVAAGAVGLCCAKIGE 81 Query: 86 LR 87 Sbjct: 82 AE 83 >gi|78355618|ref|YP_387067.1| arginine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218023|gb|ABB37372.1| arginine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 650 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 98/294 (33%), Gaps = 29/294 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGS--- 76 P +E +F + +K N Q VI+ +A GS Sbjct: 77 PVLLRIENILESRISLLHKSFRNAIESLGYQGGYRGVFPIKVNQQQQVIEKIATYGSMYH 136 Query: 77 -GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL++ S+ EL A++ E + K + IDL L + F E+ + Sbjct: 137 HGLEVGSKAELIAAISQAQDKEACIVCNGYKDEEFIDLGLHAVRMGFKCFFVLEMPRELE 196 Query: 136 RAVSLGKKAPIAFRVNPDI----NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + ++ + + + A H S G+ + + Sbjct: 197 LILRRSQQMGVRPLIGTRVKLASKAGGHWSDSGGELSTFGLTTAQIMDVVDRLQKEDMLD 256 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH--- 248 + H+GSQ+ I A + L S G + ++D+GGGL + Y H Sbjct: 257 CFRLLHYHLGSQVPNIRDIRSAVMEATRVYAGLVSEGAAMGYLDLGGGLAVDYDGSHTNF 316 Query: 249 ---RPPSSSDYASLIHQYFG-------NLQCKIILEPGRFLVADVGILVTKVIS 292 R + +Y + I + II E GR VA +L+ ++ Sbjct: 317 VSSRNYTQDEYCTDIVEAVMSILDETGVPHPHIITESGRATVAYYSMLLFNILD 370 >gi|283788540|ref|YP_003368405.1| biosynthetic arginine decarboxylase [Citrobacter rodentium ICC168] gi|282951994|emb|CBG91721.1| biosynthetic arginine decarboxylase [Citrobacter rodentium ICC168] Length = 658 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 123/347 (35%), Gaps = 32/347 (9%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L KL + P ++ + + AF D + Y +K N Sbjct: 70 VDLAKLVKAREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L H G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHRRVIESLIHSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKM 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVIEKMSEVAIVLEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAAQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L + I + H+GSQ+ I + +L G NIQ DV Sbjct: 250 VLQLVEILREHGRLDSIQLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQYFGN-------LQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ I G+ +I E GR + A Sbjct: 310 GGGLGVDYEGTRSKSDCSVNYGLNEYANNIIWAIGDACEENGLPHPTVITESGRAVTAHH 369 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 +LV+ +I ++++ V ++ + Sbjct: 370 TVLVSNIIGVERNEYTVPVAPAEDAPRALQSMWETWQEMHEPGTRRS 416 >gi|1590814|gb|AAB09723.1| arginine decarboxylase [Arabidopsis thaliana] Length = 702 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 88/258 (34%), Gaps = 26/258 (10%) Query: 15 NVSLEKLAHVV--------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYA 58 ++ L K+ V Q P ++ +AFD Y Sbjct: 75 DIDLMKVVKKVTDPSGLGLQLPLIVRFPDVLKNRLECLQSAFDYAIQSQGYDSHYQGVYP 134 Query: 59 LKANSNQAVIKTLAHLGSGL----DIVSEGE--LRRALAAPVPAERIVFSGVGKTIDEID 112 +K N ++ +I+ + GSG + S+ E L + E + K + I Sbjct: 135 VKCNQDRFIIEDIVEFGSGFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFKDSEYIS 194 Query: 113 LALQSG----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 LAL +E E EL + + + + I R + H ++G+K Sbjct: 195 LALFGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG 254 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 + + + + + + HIGSQI L +L G Sbjct: 255 KFGLTTVQILRVVRKLSQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLYCELVRLG 314 Query: 229 HNIQHIDVGGGLGIAYHS 246 +++ ID+GGGLGI Y Sbjct: 315 AHMKVIDIGGGLGIDYDG 332 >gi|15227223|ref|NP_179243.1| ADC1 (ARGININE DECARBOXYLASE 1); arginine decarboxylase [Arabidopsis thaliana] gi|12643847|sp|Q9SI64|SPE1_ARATH RecName: Full=Arginine decarboxylase 1; Short=ADC 1; Short=ADC-O; Short=ARGDC 1 gi|4589977|gb|AAD26494.1| arginine decarboxylase [Arabidopsis thaliana] gi|30794011|gb|AAP40453.1| putative arginine decarboxylase [Arabidopsis thaliana] gi|330251409|gb|AEC06503.1| arginine decarboxylase 1 [Arabidopsis thaliana] Length = 702 Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 88/258 (34%), Gaps = 26/258 (10%) Query: 15 NVSLEKLAHVV--------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYA 58 ++ L K+ V Q P ++ +AFD Y Sbjct: 75 DIDLMKVVKKVTDPSGLGLQLPLIVRFPDVLKNRLECLQSAFDYAIQSQGYDSHYQGVYP 134 Query: 59 LKANSNQAVIKTLAHLGSGL----DIVSEGE--LRRALAAPVPAERIVFSGVGKTIDEID 112 +K N ++ +I+ + GSG + S+ E L + E + K + I Sbjct: 135 VKCNQDRFIIEDIVEFGSGFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFKDSEYIS 194 Query: 113 LALQSG----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 LAL +E E EL + + + + I R + H ++G+K Sbjct: 195 LALFGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG 254 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 + + + + + + HIGSQI L +L G Sbjct: 255 KFGLTTVQILRVVRKLSQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLYCELVRLG 314 Query: 229 HNIQHIDVGGGLGIAYHS 246 +++ ID+GGGLGI Y Sbjct: 315 AHMKVIDIGGGLGIDYDG 332 >gi|307565693|ref|ZP_07628162.1| arginine 2-monooxygenase [Prevotella amnii CRIS 21A-A] gi|307345519|gb|EFN90887.1| arginine 2-monooxygenase [Prevotella amnii CRIS 21A-A] Length = 630 Score = 49.8 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 70/359 (19%), Positives = 121/359 (33%), Gaps = 37/359 (10%) Query: 16 VSLEKLAHVVQ----TP-FYCYSTTAIEKNYLTFSNAFDGMD--------TMVCYALKAN 62 + L + + TP ++ ++ FD + Y +K N Sbjct: 42 IDLRDIMDELALRDVTPPVLLRFPDILDNRIEKTASCFDQAKKEYNFNAENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 Q V++ + G GL+ S+ EL +A ++ ++ K I+LAL + Sbjct: 102 QMQPVVEEIITHGRKFNLGLEAGSKPELHAVIAVQCQSDALIICNGYKDQSYIELALLAQ 161 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPI 175 + E KK + + I ++ + K +G KFG+ Sbjct: 162 KMGKRIFIVVEKLNEIDLIAHAAKKLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTS 221 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 ++ + + + HIGSQI +I A LR G+N++ + Sbjct: 222 SELLNALELLDNKGLHDSLKLIHFHIGSQITKIRRIQTALNEAGQYYVNLRKMGYNVEFV 281 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL--------------QCKIILEPGRFLV 280 D GGGLG+ Y S S I +Y + II E GR L Sbjct: 282 DCGGGLGVDYDGTRSSSSESSVNYSIQEYVNDCVYTFVDVSDKNNIPHPNIITESGRSLA 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH--EINYIVNPAGDRLHIH 337 A ILV V+ + + + + LYD + + ++ D I Sbjct: 342 AHHSILVIDVLETASLPEMSDDFEAKETDHQLVRDLYDIWDNLDKRNMLEDWHDAEQIR 400 >gi|296169892|ref|ZP_06851504.1| diaminopimelate decarboxylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895448|gb|EFG75150.1| diaminopimelate decarboxylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 243 Score = 49.8 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 2/73 (2%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRAL 90 + NA G V Y ++ AV + G + + S+ EL AL Sbjct: 33 VIDEADFRDRARRWRNALRG--ARVVYFGRSPLTAAVARFAREEGLAIGVRSDRELAVAL 90 Query: 91 AAPVPAERIVFSG 103 AA RIV Sbjct: 91 AAGTDPARIVAHP 103 >gi|270263004|ref|ZP_06191274.1| biosynthetic arginine decarboxylase [Serratia odorifera 4Rx13] gi|270042692|gb|EFA15786.1| biosynthetic arginine decarboxylase [Serratia odorifera 4Rx13] Length = 658 Score = 49.8 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 124/362 (34%), Gaps = 37/362 (10%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L +L + P ++ + + AF + Y +K N Sbjct: 70 VDLAELVKERRKDGQRLPALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHRRVIESLVNSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKL 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVIEKMSEINMVLEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L + + + H+GSQ+ I + +L G NIQ DV Sbjct: 250 VLKLVETLREAGRLDSLQLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAHH 369 Query: 284 GILVTKVISIKKSADKTF-----VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +LV+ VI ++++ + + + + D Sbjct: 370 TVLVSNVIGVERNEFSDPLPPAEDAPRALESMWETWQEMNEPENRRSLREWLHDSQMDLH 429 Query: 339 DI 340 D+ Sbjct: 430 DV 431 >gi|282855759|ref|ZP_06265065.1| alanine racemase domain protein [Pyramidobacter piscolens W5455] gi|282586391|gb|EFB91653.1| alanine racemase domain protein [Pyramidobacter piscolens W5455] Length = 369 Score = 49.8 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 2/71 (2%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GL 78 K+A + TP + N + + K + AV + +G+ G+ Sbjct: 2 KIAA-LDTPSLLIDREIMRDNMRFMLDYAARHGAKLRPHTKTHKMPAVARLQVEMGARGI 60 Query: 79 DIVSEGELRRA 89 + GE Sbjct: 61 AVAKVGEAEAM 71 >gi|196005009|ref|XP_002112371.1| hypothetical protein TRIADDRAFT_56315 [Trichoplax adhaerens] gi|190584412|gb|EDV24481.1| hypothetical protein TRIADDRAFT_56315 [Trichoplax adhaerens] Length = 370 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 23/76 (30%), Gaps = 5/76 (6%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 S+ + TP ++ N + G++ + KA+ ++ Sbjct: 9 GCSIRDIL----TPALVVDLQKLDYNLKRLPESLKGININIRPHAKAHKCPSLAHFQIKH 64 Query: 75 GS-GLDIVSEGELRRA 89 GS G+ E Sbjct: 65 GSVGMCCQKLCEAESM 80 >gi|23397086|gb|AAN31828.1| putative arginine decarboxylase SPE2 [Arabidopsis thaliana] Length = 711 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 97/301 (32%), Gaps = 29/301 (9%) Query: 15 NVSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMV 55 ++ L K+ V Q P ++ +AFD Sbjct: 83 DIDLLKIVKKVTGPKSSGGLGLQLPLIVRFPDVLKNRLECLQSAFDYAIKSQGYDSHYQG 142 Query: 56 CYALKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVF-SGVGKTIDE 110 Y +K N ++ V++ + GS GL+ S+ E+ A++ F G E Sbjct: 143 VYPVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFKDAE 202 Query: 111 IDLALQSG-----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 G +E E EL + + + + + I R + H ++G Sbjct: 203 YISLALLGRKLALNTVIVLEQEEELDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGSTSG 262 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 +K + + + + + HIGSQI L +L Sbjct: 263 EKGKFGLTTTQIVRVVRKLRQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELV 322 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGI 285 G +++ ID+GGGLGI Y S A + +Y + + R V I Sbjct: 323 RLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYAEAFVASVRVVCDRSSVKHPVI 382 Query: 286 L 286 Sbjct: 383 C 383 >gi|239815227|ref|YP_002944137.1| alanine racemase domain protein [Variovorax paradoxus S110] gi|239801804|gb|ACS18871.1| alanine racemase domain protein [Variovorax paradoxus S110] Length = 381 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 1/70 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP A+ +N + + +K + + + + G+ G+ V+ GE Sbjct: 23 TPALLLDLGALTRNIERMAAFAKARGVGLRPHVKTHKSVEIARRQVAAGAIGVSCVTLGE 82 Query: 86 LRRALAAPVP 95 + A +P Sbjct: 83 AEVMVKAGIP 92 >gi|327194730|gb|EGE61574.1| metal-activated pyridoxal enzyme [Rhizobium etli CNPAF512] Length = 387 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 4/69 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLD 79 +QTP A+E+N + + K + + V++ LG G+ Sbjct: 24 VDEIQTPCLILDLDALERNIRKMGDYAKAHNMRHRAHGKMHKSVDVLRLQEKLGGAIGVC 83 Query: 80 I--VSEGEL 86 VSE E+ Sbjct: 84 CQKVSEAEV 92 >gi|194367540|ref|YP_002030150.1| arginine decarboxylase [Stenotrophomonas maltophilia R551-3] gi|194350344|gb|ACF53467.1| arginine decarboxylase [Stenotrophomonas maltophilia R551-3] Length = 629 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 104/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAH---LGS 76 P + + AF Y +K N + V TLA G Sbjct: 60 PLLVRFPDILGQRLGKLQAAFGQAQQDWEYSGGYTAVYPIKVNQTRGVAGTLASHHGEGF 119 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + + Sbjct: 120 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELKL 178 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + K + + K ++G + KFG+ Q+ L+ Sbjct: 179 VLEESKALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQLLDLWKSLRDTEYADC 238 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLG+ Y Sbjct: 239 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKITHVDVGGGLGVDYEGTRSRSF 298 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + FG +I+ E GR + A +L+ V ++++ + Sbjct: 299 CSINYGLHSYASNIVQPLANACEEFGLTPPRIVTECGRAMTAHHAVLIANVSEVEEAQEG 358 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 359 RVPDQHDDEPAAIRHLREIH 378 >gi|296104604|ref|YP_003614750.1| biosynthetic arginine decarboxylase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059063|gb|ADF63801.1| biosynthetic arginine decarboxylase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 632 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 77/365 (21%), Positives = 127/365 (34%), Gaps = 38/365 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L KL + P ++ + + AF D + Y +K N Sbjct: 44 VDLAKLVKAREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVN 103 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L H G GL+ S+ EL LA ++ K + I LAL Sbjct: 104 QHRRVIESLIHSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKM 163 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E T + ++ + R+ + + K S+G ++ KFG+ +Q Sbjct: 164 GHKVYLVIEKMTEIAIVLEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAANQ 223 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L + I + H+GSQ+ I + +L G NIQ DV Sbjct: 224 VLQLVEILRERGRLDSIQLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDV 283 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQY-------FGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ I G +I E GR + A Sbjct: 284 GGGLGVDYEGTRSQSDCSVNYGLNEYANNIIWAIGDACEEHGLPHPTVITESGRAVTAHH 343 Query: 284 GILVTKVISIKKSAD-----KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +LV+ +I +++S + + + D Sbjct: 344 TVLVSNIIGVERSEITEATPPQDDAPRSLQSMWETWQEMHEPGTRRSLREWLHDSQMDLH 403 Query: 339 DI-VG 342 DI VG Sbjct: 404 DIHVG 408 >gi|283779635|ref|YP_003370390.1| arginine decarboxylase [Pirellula staleyi DSM 6068] gi|283438088|gb|ADB16530.1| arginine decarboxylase [Pirellula staleyi DSM 6068] Length = 686 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 114/334 (34%), Gaps = 42/334 (12%) Query: 8 EGSLHAE-------NVSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM---- 51 +G L ++ ++ L +Q P ++ + F Sbjct: 79 KGHLTVHPTKDPNQSIDMKDLIDRLQLRGLDLPILLRFNGLLKDRLREIHDVFAQAIREH 138 Query: 52 ---DTMVC-YALKANSNQAVIKTL----AHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 +C Y +K N + V++ + G GL+ S+ E+ + A A + Sbjct: 139 DYKGRYICVYPIKVNQQRHVVEQVVQYGKQYGFGLEAGSKPEMLAVV-AMTDAVTPIICN 197 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA---NTHK 160 K + I++A+ + NV E T + +K + ++ I + + Sbjct: 198 GFKDAEFIEMAMLAQKIGRNVIPVVEKFTELDLILKYAEKVGVRPQIGMRIKLAARGSGR 257 Query: 161 KISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG-VDMHIGSQIDQIESFHKAFKLLRD 219 S+G KFG+ + +I + + H+GSQI I A Sbjct: 258 WQSSGGWRSKFGLTVGEILQAMEELKKRDMLDCFKLLHFHLGSQITNIRHVKGAMTEAAR 317 Query: 220 LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS------SDYASLIHQYFGN------- 266 L G ++++DVGGGLG+ Y S +YA+ + + Sbjct: 318 AYADLVKKGAGLEYLDVGGGLGVDYDGSQTNFESSVNYTLQEYANDVVHHLQTVLDESGV 377 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 II E GR + A L+ V+ + + Sbjct: 378 KHPHIISESGRAVAAYHACLIFGVLGVAGQGNGD 411 >gi|254513241|ref|ZP_05125306.1| threonine aldolase family protein [Rhodobacteraceae bacterium KLH11] gi|221532245|gb|EEE35241.1| threonine aldolase family protein [Rhodobacteraceae bacterium KLH11] Length = 382 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 49/182 (26%), Gaps = 4/182 (2%) Query: 15 NVSLEKLA---HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT- 70 N L + + TP ++N + LKA+ + + Sbjct: 14 NADLVDIPGGREELDTPCLLVDLPVFKQNIERAAQMVADTGKAFTPHLKAHKTPDIAEMQ 73 Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 A +G + S GE I + V AL + V ++ Sbjct: 74 CAASAAGFCVASIGEAEVFAKYGDTPLTITSATVTGRQMARIAALSKQVSELTVVVDTPP 133 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + I + +A T + + + G P + L YA L Sbjct: 134 NIRALANLDATVSVLIDIDMGRGRSACTEEAQAVHLAREIMGAPNLNLAGLQCYAGQLSH 193 Query: 191 VK 192 + Sbjct: 194 MN 195 >gi|302552096|ref|ZP_07304438.1| alanine racemase domain-containing protein [Streptomyces viridochromogenes DSM 40736] gi|302469714|gb|EFL32807.1| alanine racemase domain-containing protein [Streptomyces viridochromogenes DSM 40736] Length = 364 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 1/70 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +E N + A ++ KA+ + G+ GL + + GE Sbjct: 11 TPALVVDPDVLESNIERMAEASRAQGFVLRPHAKAHKCAQIGDLQLRAGARGLSVATIGE 70 Query: 86 LRRALAAPVP 95 V Sbjct: 71 AEAFARVGVD 80 >gi|148263056|ref|YP_001229762.1| arginine decarboxylase [Geobacter uraniireducens Rf4] gi|189046764|sp|A5GB52|SPEA_GEOUR RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|146396556|gb|ABQ25189.1| arginine decarboxylase [Geobacter uraniireducens Rf4] Length = 635 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 124/321 (38%), Gaps = 34/321 (10%) Query: 16 VSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 + L L ++ P ++ + + F Y +K N Sbjct: 43 IDLRALVDDLIKRKIKPPILLRFMDVLQGRIASINRVFKNAIQENNYPAKYQTFYPIKVN 102 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 + V++ +A+ G GL++ S+ EL ++ + K + I++ L + Sbjct: 103 QQRQVVEAIANFGKRYNIGLEVGSKPELVAGISFATGNNLPIICNGYKDTEYIEMVLSAT 162 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPI 175 +++ E ++ + L KK + ++ + + K ++G ++ KFG+ + Sbjct: 163 KIGYDITLVVEKLFELEKIIELVKKTGVQPKLGIRVKLSSKGIGKWATSGGEDAKFGLRM 222 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 +I + +K + + HIGSQI +I+ A + ++R G I+++ Sbjct: 223 SEIIAAIEMLEKHDLIKCVKLLHFHIGSQITKIDKIKTALIEGARIYAEMRKLGVGIEYL 282 Query: 235 DVGGGLGIAYH------SDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVA 281 D+GGGLG+ Y S +YA+ + N+ II E GR VA Sbjct: 283 DIGGGLGVDYDGSKSSNFSSVNYSIEEYANDVIYQIKNICEDAGVECPNIISESGRATVA 342 Query: 282 DVGILVTKVISIKKSADKTFV 302 +LVT V++ Sbjct: 343 HYSVLVTNVLNTNTQNIMPDF 363 >gi|84468436|dbj|BAE71301.1| putative arginine decarboxylase [Trifolium pratense] Length = 729 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 92/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + AFDG Y +K N ++ V++ + GSG Sbjct: 118 PLVVRFPDVLKNRLESIQGAFDGAIQLQGYESHYQGVYPVKCNQDRFVVEDIVEFGSGFR 177 Query: 79 ---DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 + S+ EL A++ R F D ++L + + L+ + Sbjct: 178 FGLEAGSKPELLLAMSCLCKGNREAFLICNGFKDSEYISLALVARKLALNTVIVLEQEEE 237 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKED-----KFGIPIHQIHSLYAYASTLPG 190 + + + R + A K S KFG+ QI + L Sbjct: 238 LDMVVEISNKLCIRPVIGVRAKLRTKHSGHFGSTSGDKGKFGLTTIQILRVVKKLEQLDM 297 Query: 191 VK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + + HIGSQI E + +L G ++ +D+GGGLGI Y Sbjct: 298 LDCLQLLHFHIGSQIPTTELLADGVGEAAQIYCELLRLGAQMRVLDIGGGLGIDYDGSKS 357 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S A I +Y + + R V I Sbjct: 358 GDSDISVAYGIEEYAAAVVHAVKYVCDRRNVNHPVIC 394 >gi|84468336|dbj|BAE71251.1| putative arginine decarboxylase [Trifolium pratense] Length = 729 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 92/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + AFDG Y +K N ++ V++ + GSG Sbjct: 118 PLVVRFPDVLKNRLESIQGAFDGAIQLQGYESHYQGVYPVKCNQDRFVVEDIVEFGSGFR 177 Query: 79 ---DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 + S+ EL A++ R F D ++L + + L+ + Sbjct: 178 FGLEAGSKPELLLAMSCLCKGNREAFLICNGFKDSEYISLALVARKLALNTVIVLEQEEE 237 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKED-----KFGIPIHQIHSLYAYASTLPG 190 + + + R + A K S KFG+ QI + L Sbjct: 238 LDMVVEISNKLCIRPVIGVRAKLRTKHSGHFGSTSGDKGKFGLTTIQILRVVKKLEQLDM 297 Query: 191 VK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + + HIGSQI E + +L G ++ +D+GGGLGI Y Sbjct: 298 LDCLQLLHFHIGSQIPTTELLADGVGEAAQIYCELLRLGAQMRVLDIGGGLGIDYDGSKS 357 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S A I +Y + + R V I Sbjct: 358 GDSDISVAYGIEEYAAAVVHAVKYVCDRRNVNHPVIC 394 >gi|227819408|ref|YP_002823379.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234] gi|227338407|gb|ACP22626.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234] Length = 352 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 3/72 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI--VSE 83 TP +N F D V +K + + + G+ G+ VSE Sbjct: 7 TPAVLVDLDIARRNVRAFQAYADRHGIRVRPHIKTHKLPQMAELQLEAGAVGITCQKVSE 66 Query: 84 GELRRALAAPVP 95 E +A + Sbjct: 67 AEAMVDGSARIK 78 >gi|189424734|ref|YP_001951911.1| arginine decarboxylase [Geobacter lovleyi SZ] gi|226732567|sp|B3EAF3|SPEA_GEOLS RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|189420993|gb|ACD95391.1| arginine decarboxylase [Geobacter lovleyi SZ] Length = 635 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 122/316 (38%), Gaps = 34/316 (10%) Query: 16 VSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 + L L ++ P ++ + + F Y +K N Sbjct: 43 IDLRALVDDLIKRKIKPPILLRFMDVLQGRIASINRVFRNAIAENDYPAKYQTFYPIKVN 102 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 + V++ +A G GL++ S+ EL +A + K + I+ L + Sbjct: 103 QQRQVVEAIASYGKRYNIGLEVGSKPELVAGIAISTGNGLPIICNGYKDAEYIETVLFAT 162 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPI 175 +N+ E ++ + L KK I + + + T K ++G ++ KFG+ + Sbjct: 163 RVGYNITIVVEKLFELEKIIELAKKTGIRPSLGIRVKLSSKGTGKWATSGGEDAKFGLRM 222 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 +I + + ++ + HIGSQ+ +I+ A + ++R G NIQ++ Sbjct: 223 SEIMAAIKMLQEADLLDCVNLLHSHIGSQVTKIDKIKTALIEAARIYSEMRKLGVNIQYL 282 Query: 235 DVGGGLGIAYH------SDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVA 281 D+GGGLG+ Y + +YA+ + N II E GR VA Sbjct: 283 DIGGGLGVDYDGSKSSYFSSVNYTVEEYANDVIYQIKNICDEAGVDCPNIISESGRATVA 342 Query: 282 DVGILVTKVISIKKSA 297 +LVT V++ Sbjct: 343 HYSVLVTNVLNTNTQN 358 >gi|170049411|ref|XP_001855912.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167871259|gb|EDS34642.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 69 Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 12/32 (37%) Query: 357 IALPRPGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + + D + E GAY + +N L Sbjct: 1 MPELQIDDWVVFENMGAYTIPVASPFNGFPLP 32 >gi|146312983|ref|YP_001178057.1| arginine decarboxylase [Enterobacter sp. 638] gi|145319859|gb|ABP62006.1| arginine decarboxylase [Enterobacter sp. 638] Length = 658 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 73/362 (20%), Positives = 124/362 (34%), Gaps = 37/362 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L KL + P ++ + + AF D + Y +K N Sbjct: 70 VDLAKLVKAREAQGQRLPALFCFPQILQHRLRSINQAFKRARESYGYKGDYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L H G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHRRVIESLIHSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKM 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVIEKMSEIAIVLEEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L + I + H+GSQ+ I + +L G NIQ DV Sbjct: 250 VLELVEILRECGRLDSIQLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQY-------FGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ I +I E GR + A Sbjct: 310 GGGLGVDYEGTRSQSDCSVNYGLNEYANNIIWAIGDACEENNLPHPTVITESGRAVTAHH 369 Query: 284 GILVTKVISIKKSAD-----KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +LV+ +I +++S + + + + D Sbjct: 370 TVLVSNIIGVERSENTEATPPQENAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLH 429 Query: 339 DI 340 DI Sbjct: 430 DI 431 >gi|224135745|ref|XP_002327293.1| predicted protein [Populus trichocarpa] gi|222835663|gb|EEE74098.1| predicted protein [Populus trichocarpa] Length = 63 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 1/44 (2%) Query: 343 PICETGDFIALNRKIALPRPGDLLYI-EKTGAYGAVQSGTYNSR 385 P C++ D + ++ + DL+ + GAY +N Sbjct: 5 PSCDSHDVSTSDEQMPELQVNDLIILYYYMGAYTTSAGTKFNGF 48 >gi|51891691|ref|YP_074382.1| putative alanine racemase [Symbiobacterium thermophilum IAM 14863] gi|51855380|dbj|BAD39538.1| putative alanine racemase [Symbiobacterium thermophilum IAM 14863] Length = 383 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 17/48 (35%), Gaps = 1/48 (2%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA-NSNQAVIKTLAHLGS 76 Y AI N T + A + + K N N VI +A G Sbjct: 31 YVLDLDAIRNNARTLAEAARREGIQLYFMSKQLNRNPQVIAAVAEAGI 78 >gi|15236176|ref|NP_195197.1| ADC2 (ARGININE DECARBOXYLASE 2); arginine decarboxylase [Arabidopsis thaliana] gi|42573175|ref|NP_974684.1| ADC2 (ARGININE DECARBOXYLASE 2); arginine decarboxylase [Arabidopsis thaliana] gi|12229960|sp|O23141|SPE2_ARATH RecName: Full=Arginine decarboxylase 2; Short=ADC 2; Short=ARGDC 2; AltName: Full=ADC-N gi|2271485|gb|AAB72179.1| arginine decarboxylase [Arabidopsis thaliana] gi|3096940|emb|CAA18850.1| arginine decarboxylase SPE2 [Arabidopsis thaliana] gi|7270422|emb|CAB80188.1| arginine decarboxylase SPE2 [Arabidopsis thaliana] gi|14517492|gb|AAK62636.1| AT4g34710/T4L20_290 [Arabidopsis thaliana] gi|20334764|gb|AAM16243.1| AT4g34710/T4L20_290 [Arabidopsis thaliana] gi|332661013|gb|AEE86413.1| arginine decarboxylase 2 [Arabidopsis thaliana] gi|332661014|gb|AEE86414.1| arginine decarboxylase 2 [Arabidopsis thaliana] Length = 711 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 98/301 (32%), Gaps = 29/301 (9%) Query: 15 NVSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMV 55 ++ L K+ V Q P ++ +AFD Sbjct: 83 DIDLLKIVKKVTGPKSSGGLGLQLPLIVRFPDVLKNRLECLQSAFDYAIKSQGYDSHYQG 142 Query: 56 CYALKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVF-SGVGKTIDE 110 Y +K N ++ V++ + GS GL+ S+ E+ A++ F G E Sbjct: 143 VYPVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFKDAE 202 Query: 111 IDLALQSG-----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 G +E E EL + + + + + I R + H ++G Sbjct: 203 YISLALLGRKLALNTVIVLEQEEELDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGSTSG 262 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 +K + + + + + HIGSQI L +L Sbjct: 263 EKGKFGLTTTQIVRVVRKLRQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELV 322 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGI 285 G +++ ID+GGGLGI Y S A + +Y + + + R V I Sbjct: 323 RLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYAEAVVASVRVVCDRSSVKHPVI 382 Query: 286 L 286 Sbjct: 383 C 383 >gi|293394544|ref|ZP_06638840.1| arginine 2-monooxygenase [Serratia odorifera DSM 4582] gi|291423009|gb|EFE96242.1| arginine 2-monooxygenase [Serratia odorifera DSM 4582] Length = 658 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 69/362 (19%), Positives = 124/362 (34%), Gaps = 37/362 (10%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L +L Q P ++ + + AF + Y +K N Sbjct: 70 VDLAELVKERQKEGQRLPALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVN 129 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L + G GL+ S+ EL LA ++ K + I LAL Sbjct: 130 QHRRVIESLVNSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKL 189 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQ 177 V E + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 190 GHKVYLVIEKMSEINLVLEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAVQ 249 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L + + + H+GSQ+ I + +L G NIQ DV Sbjct: 250 VLKLVETLREAGRLDSLQLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDV 309 Query: 237 GGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 GGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAHH 369 Query: 284 GILVTKVISIKKSADKTFV-----ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +LV+ VI ++++ + + + + D Sbjct: 370 TVLVSNVIGVERNEFGEPHPPAEDAPRALESMWETWLEMNEPENRRSLREWLHDSQMDLH 429 Query: 339 DI 340 D+ Sbjct: 430 DV 431 >gi|40645472|dbj|BAD06581.1| arginine decarboxylase [Nicotiana tabacum] Length = 733 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 85/277 (30%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + + FD Y +K N ++ V++ + GSG Sbjct: 117 PLVVRFPDILKNRLESLQSVFDYAVQSQGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 176 Query: 79 ---DIVSEGELRRALAAPVPAERI-VFSGVGKTIDEIDLA-----LQSGIYCFNVESESE 129 + S+ EL A++ + G E +E E E Sbjct: 177 FGLEAGSKPELLLAMSCLCKGSHEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 236 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 237 LDLVIDISKKMAVRPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQIVRVVKKLEESGM 296 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI + +L G +++ID GGGLGI Y Sbjct: 297 LDCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGAGMKYIDCGGGLGIDYDGTKS 356 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + +Y + + R V I Sbjct: 357 CDSDCSVGYGLQEYASTVVQAVRFVCDRKNVKHPVIC 393 >gi|3062801|dbj|BAA25685.1| arginine decarboxylase [Nicotiana sylvestris] Length = 621 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 85/277 (30%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + + FD Y +K N ++ V++ + GSG Sbjct: 117 PLVVRFPDILKNRLESLQSVFDYAVQSQGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 176 Query: 79 ---DIVSEGELRRALAAPVPAERI-VFSGVGKTIDEIDLA-----LQSGIYCFNVESESE 129 + S+ EL A++ + G E +E E E Sbjct: 177 FGLEAGSKPELLLAMSCLCKGSHEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 236 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 237 LDLVIDISKKMAVRPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQIVRVVKKLEESGM 296 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI + +L G +++ID GGGLGI Y Sbjct: 297 LDCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGAGMKYIDCGGGLGIDYDGTKS 356 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + +Y + + R V I Sbjct: 357 CDSDCSVGYGLQEYASTVVQAVRFVCDRKNVKHPVIC 393 >gi|282859014|ref|ZP_06268150.1| arginine 2-monooxygenase [Prevotella bivia JCVIHMP010] gi|282588182|gb|EFB93351.1| arginine 2-monooxygenase [Prevotella bivia JCVIHMP010] Length = 630 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 115/342 (33%), Gaps = 32/342 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMD--------TMVCYALKANSNQAVIKTLAHLG---- 75 P ++ ++ FD + Y +K N Q V++ + G Sbjct: 59 PVLLRFPDILDNRIEKTASCFDKAKKEYDFKAENFIIYPIKVNQMQPVVEEIITHGRKFN 118 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL+ S+ EL +A ++ ++ K I+LAL + + E + Sbjct: 119 LGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIE 178 Query: 136 RAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 KK + + I ++ + K +G KFG+ ++ + Sbjct: 179 VIARAAKKLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALELLDSKGLHD 238 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI +I A LR G+N++ +D GGGLG+ Y Sbjct: 239 SLKLIHFHIGSQITKIRRIQVALNEAGQYYVNLRKMGYNVEFVDCGGGLGVDYDGTRSSS 298 Query: 252 SSSDYASLIHQYFGNL--------------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 S S I +Y + II E GR L A +LV V+ Sbjct: 299 SESSVNYSIQEYVNDCVYTFVDAANKNDIPHPNIITESGRSLAAHHSVLVIDVLETASLP 358 Query: 298 DKTFVILDVAMNDFMRPTLYDAYH--EINYIVNPAGDRLHIH 337 + + + LY + + ++ D I Sbjct: 359 EMPEEFEAKETDHQLVRDLYHIWDNIDKRNMLEDWHDAEQIR 400 >gi|117924031|ref|YP_864648.1| arginine decarboxylase [Magnetococcus sp. MC-1] gi|117607787|gb|ABK43242.1| arginine decarboxylase [Magnetococcus sp. MC-1] Length = 644 Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 16/116 (13%) Query: 12 HAENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA-------- 58 H E++SL KL Q P ++ + AF + + YA Sbjct: 60 HIESISLPKLVDDVEAMGFQGPMLIRFGGILQDRITRLNRAFTESRSRLNYAGHYQGVYP 119 Query: 59 LKANSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 +K N ++ V+ + G GL++ S+ EL A + ++ K D I+ Sbjct: 120 VKVNQDRHVVSEVVASGTPMGLEVGSKPEL-VLAMAYMDRTPLIICNGYKDRDYIE 174 >gi|261878989|ref|ZP_06005416.1| arginine 2-monooxygenase [Prevotella bergensis DSM 17361] gi|270334374|gb|EFA45160.1| arginine 2-monooxygenase [Prevotella bergensis DSM 17361] Length = 630 Score = 49.1 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 113/324 (34%), Gaps = 30/324 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLG---- 75 P ++ ++ F D + Y +K N Q V++ + G Sbjct: 59 PVLLRFPDILDNRIEKTASCFIKAKEEYEFKADNFIIYPIKVNQMQPVVEEIITHGRKFN 118 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL+ S+ EL +A ++ ++ K D I+LAL + + E Sbjct: 119 LGLEAGSKPELHAVIAVQCQSDALIICNGYKDEDYIELALLAQKMGKRIFIVVEKLNELD 178 Query: 136 RAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + K+ ++ + I ++ + K +G KFG+ ++ + Sbjct: 179 TIAKVAKRLKVSPNLGVRIKLASSGSGKWEESGGDASKFGLTATELLQALRKLDAMGMHD 238 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI +I A + L G+++ +D GGGLG+ Y Sbjct: 239 SLRLIHFHIGSQITKIRRIQTALREAAQYYINLHKMGYHVDFVDCGGGLGVDYDGTRSAH 298 Query: 252 SSSDYASLIHQYFGNL--------------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 S S I +Y + II E GR L A +LV V+ Sbjct: 299 SESSVNYSIQEYVNDCVSTFVDAANKNNIPHPNIITESGRSLAAHHSVLVIDVLETTSLP 358 Query: 298 DKTFVILDVAMNDFMRPTLYDAYH 321 + + + + LY+ + Sbjct: 359 EMPEEFEAKSDDHPLVKELYNIWC 382 >gi|169628346|ref|YP_001701995.1| hypothetical protein MAB_1253c [Mycobacterium abscessus ATCC 19977] gi|169240313|emb|CAM61341.1| Conserved hypothetical protein (alanine racemase?) [Mycobacterium abscessus] Length = 360 Score = 49.1 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 1/69 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TPF +++N + G + K++ + + G+ GL + + GE Sbjct: 15 TPFLAVDLAVMDRNIERLAGRLRGTGIRLRPHAKSHKCIEIARRQIDSGAIGLTVATVGE 74 Query: 86 LRRALAAPV 94 A Sbjct: 75 AEVFAEAGF 83 >gi|238754597|ref|ZP_04615951.1| Biosynthetic arginine decarboxylase [Yersinia ruckeri ATCC 29473] gi|238707228|gb|EEP99591.1| Biosynthetic arginine decarboxylase [Yersinia ruckeri ATCC 29473] Length = 638 Score = 49.1 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 115/310 (37%), Gaps = 33/310 (10%) Query: 16 VSLEKLAHVVQ------TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L +L +Q P ++ + + AF + + Y +K Sbjct: 49 VDLAQLVKDMQEERGQRLPALFCFPQILQHRLRSINAAFKRAREEFGYQGNYFLVYPIKV 108 Query: 62 NSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 N ++ VI++L + G GL+ S+ E+ LA ++ K + I LAL Sbjct: 109 NQHRRVIESLVNSGEPLGLEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALTGEK 168 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIH 176 V E + + + + + R+ + + K ++G ++ KFG+ Sbjct: 169 LGHKVYLVIEKMSEIKMVLEEAARLDVVPRLGVRARLASQGSGKWQASGGEKSKFGLSAT 228 Query: 177 QIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q+ L + + + H+GSQ+ I + +L G NIQ D Sbjct: 229 QVLQLVEMLREADKLDSLQLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFD 288 Query: 236 VGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVAD 282 VGGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 289 VGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAH 348 Query: 283 VGILVTKVIS 292 +LV+ VI Sbjct: 349 HTVLVSNVIG 358 >gi|256830090|ref|YP_003158818.1| arginine decarboxylase [Desulfomicrobium baculatum DSM 4028] gi|256579266|gb|ACU90402.1| arginine decarboxylase [Desulfomicrobium baculatum DSM 4028] Length = 655 Score = 49.1 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 63/304 (20%), Positives = 102/304 (33%), Gaps = 29/304 (9%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGS- 76 P ++ ++F + Y +K N Q V++ ++ +G Sbjct: 63 GLPVLLRIENLLDAQISLLHDSFASAIKALQYSGEFRGVYPVKVNQQQQVLEEISKVGDR 122 Query: 77 ---GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE----SESE 129 G ++ S+ EL AL+ + + K D IDLAL + F SE Sbjct: 123 YNHGYEVGSKAELIAALSFLKNPKACLVCNGYKDRDYIDLALYACKMGFLCFLVLEMPSE 182 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + RA +LG K I R+ A H S G + L Sbjct: 183 LPLILDRAKALGIKPRIGVRIKVSTQAGGHWAESAGDLSIFGLSTAEVVDVLDLLRGQSM 242 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH- 248 + + H+GSQI I A + +L G + +D+GGGL + Y H Sbjct: 243 LDCVQLLHFHLGSQIPNIRDIRTAVHEATRMYAELAKEGCAMGFLDLGGGLAVDYDGSHT 302 Query: 249 ------------RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 + II E GR VA +L+ V+ + + Sbjct: 303 NYASSRNYSLEEYCTDIVESVMATVDEHDLPHPHIITESGRATVAYYSVLLFNVLDVSRL 362 Query: 297 ADKT 300 ++T Sbjct: 363 ENRT 366 >gi|288801683|ref|ZP_06407125.1| arginine 2-monooxygenase [Prevotella melaninogenica D18] gi|302344910|ref|YP_003813263.1| arginine 2-monooxygenase [Prevotella melaninogenica ATCC 25845] gi|288335725|gb|EFC74158.1| arginine 2-monooxygenase [Prevotella melaninogenica D18] gi|302149054|gb|ADK95316.1| arginine 2-monooxygenase [Prevotella melaninogenica ATCC 25845] Length = 630 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 107/340 (31%), Gaps = 35/340 (10%) Query: 16 VSLEKLAHVVQ----TP-FYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L + + TP ++ F A D + Y +K N Sbjct: 42 VDLRDVMDELALRDVTPPVLLRFPDILDNRIEKTSSCFEKARKEYDFKAENFIIYPIKVN 101 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 Q V++ + G GL+ S+ EL +A ++ ++ K I+LAL + Sbjct: 102 QMQPVVEEIISHGRKFNLGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQ 161 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPI 175 + E KK + + I ++ + K +G KFG+ Sbjct: 162 KMGKRIFIVVEKLNEIDLIARAAKKLNVKPNLGIRIKLASSGSGKWADSGGDASKFGLTS 221 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 ++ + + HIGSQI +I A LR G+N+ + Sbjct: 222 SELLQALETLDNKGLHDCLHLIHFHIGSQITKIRRIQTALNEAAQYYVNLRKMGYNVDFV 281 Query: 235 DVGGGLGIAYHS--------------DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLV 280 D GGGLG+ Y II E GR L Sbjct: 282 DCGGGLGVDYDGTRSASSESSVNYSIQEYVNDCVYTFVDAANKNDIPHPNIITESGRSLS 341 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 A +LV V+ + + + + LYD + Sbjct: 342 AHHSVLVIDVLETASLPEMSEDFEAKDTDHQLVKDLYDIW 381 >gi|254413160|ref|ZP_05026932.1| arginine decarboxylase [Microcoleus chthonoplastes PCC 7420] gi|196180324|gb|EDX75316.1| arginine decarboxylase [Microcoleus chthonoplastes PCC 7420] Length = 699 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 101/291 (34%), Gaps = 21/291 (7%) Query: 14 ENVSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALK 60 ++ L +L ++ P + + + F Y +K Sbjct: 76 GSLDLFELVEALKGRNLELPLLIRFSDILADRIERLNACFAKAIARYNYPGRYQGVYPVK 135 Query: 61 ANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL--- 113 N ++ +++ L +G GL+ S+ EL ALA ++ K + I+ Sbjct: 136 CNQHRHLVEELVQVGHPYQFGLEAGSKPELMIALATLKTDGALLICNGHKDREYIETALL 195 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 +++ G V + E L + PI + + + KFG+ Sbjct: 196 SMRLGQKPIIVIEQLEEVQLVIDISAKLGIEPIVGVRAKLSTKGSGRWGESTGDRAKFGL 255 Query: 174 PIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + +I S + + + HIGSQ I A + + +LR+ G N+ Sbjct: 256 TLPEILSGVNQLRDAGLLNALQLLHFHIGSQTSAISVIKDAIREASQIYVELRALGANMN 315 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADV 283 ++DVGGGL I Y +S ++ + + R + A V Sbjct: 316 YLDVGGGLAIDYDGSKTNFHASKNYNMQNYANDIVAEVKEACEARQIPAPV 366 >gi|297798446|ref|XP_002867107.1| hypothetical protein ARALYDRAFT_491183 [Arabidopsis lyrata subsp. lyrata] gi|297312943|gb|EFH43366.1| hypothetical protein ARALYDRAFT_491183 [Arabidopsis lyrata subsp. lyrata] Length = 707 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 99/301 (32%), Gaps = 29/301 (9%) Query: 15 NVSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMV 55 ++ L K+ V Q P ++ +AFD Sbjct: 80 DIDLLKIVKKVTDPKSSGGLGLQLPLIVRFPDVLKNRLECLQSAFDFAIKSQGYDSHYQG 139 Query: 56 CYALKANSNQAVIKTLAHLGS----GLDIVSEGE--LRRALAAPVPAERIVFSGVGKTID 109 Y +K N ++ V++ + GS GL+ S+ E L + + + K + Sbjct: 140 VYPVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFKDAE 199 Query: 110 EIDLALQSG----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 I LAL +E E EL + + + + I R + H ++G Sbjct: 200 YISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSG 259 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 +K + L + + + + HIGSQI L +L Sbjct: 260 EKGKFGLTTTQIVRVLRKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELV 319 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGI 285 G +++ ID+GGGLGI Y S A + +Y + + R V I Sbjct: 320 RLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYAEAVVASVRFVCDRRSVKHPVI 379 Query: 286 L 286 Sbjct: 380 C 380 >gi|3915016|sp|Q96412|SPE1_DIACA RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC gi|1575499|gb|AAB67887.1| arginine decarboxylase [Dianthus caryophyllus] Length = 725 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 95/288 (32%), Gaps = 18/288 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD G Y +K N ++ +++ + GSG Sbjct: 116 PVIIRFPDVLKHRLESLQSAFDFAVRTHGYGSHYQGVYPVKCNQDRYIVEDIVEFGSGFR 175 Query: 79 ---DIVSEGELRRALAAPVPAERI-VFSGVGKTIDEIDLALQSG-----IYCFNVESESE 129 + S+ EL A+++ + G E G +E E E Sbjct: 176 FGLEAGSKPELLMAMSSLCKGSPDSLLVCNGFKDAEYISLAIIGRKLGLNTVIVIEQEEE 235 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + +G + + R + H ++G+K + + + Sbjct: 236 VDMAIELSRKMGIRPVVGVRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLENFGM 295 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI + +L G +++ ID+GGGLGI Y Sbjct: 296 LDCLQLLHFHIGSQIPTTTLLSDGVAEASQVYCELTRLGAHMRVIDIGGGLGIDYDGSKS 355 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 S + +Y + ++ R V I V +I Sbjct: 356 GDSDLSVGYTLEEYASAVVGTVMSVCDRKGVKSPVICSESVRAIVSHH 403 >gi|312282713|dbj|BAJ34222.1| unnamed protein product [Thellungiella halophila] Length = 725 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 99/301 (32%), Gaps = 29/301 (9%) Query: 15 NVSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMV 55 ++ L K+ V Q P ++ +AFD Sbjct: 91 DIDLLKIVKKVTDPKSSGGLGLQLPLIVRFPDVLKNRLECLQSAFDFAIQSQGYDSHYQG 150 Query: 56 CYALKANSNQAVIKTLAHLGS----GLDIVSEGE--LRRALAAPVPAERIVFSGVGKTID 109 Y +K N ++ V++ + GS GL+ S+ E L + + + K + Sbjct: 151 VYPVKCNQDRFVVEDIVRFGSPFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFKDAE 210 Query: 110 EIDLALQSG----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 I LAL +E E EL + + + + I R + H ++G Sbjct: 211 YISLALLGRKLALNTLIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSG 270 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 +K + + + + + + HIGSQI L +L Sbjct: 271 EKGKFGLTTSQIVRVMRKLSQSGMLDCLQLLHFHIGSQIPSTPLLTDGVAEAAQLYCELV 330 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGI 285 G NI+ ID+GGGLGI Y S A + +Y + I R V I Sbjct: 331 RLGANIKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYAEAVVASIRFVCDRRSVKHPAI 390 Query: 286 L 286 Sbjct: 391 C 391 >gi|288550382|ref|ZP_05970216.2| arginine 2-monooxygenase [Enterobacter cancerogenus ATCC 35316] gi|288314992|gb|EFC53930.1| arginine 2-monooxygenase [Enterobacter cancerogenus ATCC 35316] Length = 637 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 73/348 (20%), Positives = 122/348 (35%), Gaps = 33/348 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLG--SG 77 P ++ + + AF D + Y +K N ++ VI++L H G G Sbjct: 66 PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 L+ S+ EL LA ++ K + I LAL V E T Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMTEIAIV 185 Query: 138 VSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK-I 193 + ++ + R+ + + K S+G ++ KFG+ +Q+ L + I Sbjct: 186 LEEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAANQVLQLVEILRERGRLDSI 245 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + H+GSQ+ I + +L G NIQ DVGGGLG+ Y Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305 Query: 254 ------SDYASLIHQY-------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-- 298 ++YA+ I G +I E GR + A +LV+ +I +++S Sbjct: 306 SVNYGLNEYANNIIWAIGDACEEHGLPHPTVITESGRAVTAHHTVLVSNIIGVERSEISE 365 Query: 299 ---KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI-VG 342 + + + D DI VG Sbjct: 366 ATPPQEDAPRSLQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHVG 413 >gi|327312900|ref|YP_004328337.1| arginine 2-monooxygenase [Prevotella denticola F0289] gi|326945361|gb|AEA21246.1| arginine 2-monooxygenase [Prevotella denticola F0289] Length = 630 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 106/323 (32%), Gaps = 30/323 (9%) Query: 28 PFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKANSNQAVIKTLAHLG---- 75 P ++ F A + Y +K N Q V++ + G Sbjct: 59 PVLLRFPDILDNRIEKTSSCFEKARKEYGFKAENFIIYPVKVNQMQPVVEEIISHGRKFN 118 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL+ S+ EL +A ++ ++ K I+LAL + + E Sbjct: 119 LGLEAGSKPELHAVIAVQCQSDSLIVCNGYKDQSYIELALLAQKMGKRIFIVVEKLNEID 178 Query: 136 RAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 KK + + I ++ + K +G KFG+ ++ Sbjct: 179 LIARAAKKLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALETLDEKGLHD 238 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI +I A LR G+ + +D GGGLG+ Y Sbjct: 239 CLHLIHFHIGSQITKIRRIQTALNEAAQYYVNLRRMGYGVDFVDCGGGLGVDYDGTRSSN 298 Query: 252 SSSDYASLIHQYFGNL--------------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 S S I +Y + II E GR L A +LV V+ Sbjct: 299 SESSVNYSIQEYVNDCVYTFVDAADKNGIPHPNIITESGRSLSAHHSVLVIDVLETASLP 358 Query: 298 DKTFVILDVAMNDFMRPTLYDAY 320 + + + + LYD + Sbjct: 359 EMSEEFEAKETDHQLVKDLYDIW 381 >gi|238752307|ref|ZP_04613786.1| Biosynthetic arginine decarboxylase [Yersinia rohdei ATCC 43380] gi|238709468|gb|EEQ01707.1| Biosynthetic arginine decarboxylase [Yersinia rohdei ATCC 43380] Length = 654 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 128/349 (36%), Gaps = 34/349 (9%) Query: 16 VSLEKLAHVVQT------PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L +L +Q P ++ + + AF D + Y +K Sbjct: 65 VDLAQLVKKMQLEQGQRLPALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKV 124 Query: 62 NSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 N ++ VI++L + G GL+ S+ E+ LA ++ K + I LAL Sbjct: 125 NQHRRVIESLVNSGEPLGLEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEK 184 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIH 176 V E + + + ++ + R+ + + K ++G ++ KFG+ Sbjct: 185 LGHKVYLVIEKMSEIKMVLEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSAT 244 Query: 177 QIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q+ L ++ + + H+GSQ+ I + +L G NIQ D Sbjct: 245 QVLQLVDMLREANSLESLQLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFD 304 Query: 236 VGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVAD 282 VGGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 305 VGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAH 364 Query: 283 VGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 +LV+ VI ++ + +L+D + E+ N Sbjct: 365 HTVLVSNVIGVE-RNEFNEPQPPATDAPRALESLWDTWLEMQEPENRRS 412 >gi|148657962|ref|YP_001278167.1| alanine racemase domain-containing protein [Roseiflexus sp. RS-1] gi|148570072|gb|ABQ92217.1| alanine racemase domain protein [Roseiflexus sp. RS-1] Length = 349 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 21/75 (28%), Gaps = 1/75 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + TP +E+N F +K + + + G+ G+ Sbjct: 3 IDDLDTPVAIIDLDRLERNIARFQTYLSQHGIANRPHIKTHKIPQIARMQMAAGAVGITC 62 Query: 81 VSEGELRRALAAPVP 95 GE A + Sbjct: 63 QKLGEAEVMADAGID 77 >gi|156362167|ref|XP_001625652.1| predicted protein [Nematostella vectensis] gi|156212495|gb|EDO33552.1| predicted protein [Nematostella vectensis] Length = 112 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 20/80 (25%), Gaps = 3/80 (3%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV---SE 83 TP E+N + KA+ A+ G+ SE Sbjct: 14 TPVLLVDLCRFERNIRKLMKTLENSGVRARPHAKAHKCPAIAHIQISHGANGVCCQKLSE 73 Query: 84 GELRRALAAPVPAERIVFSG 103 E + + I + Sbjct: 74 AESMLSSNPRIFPLNIHTAE 93 >gi|158422863|ref|YP_001524155.1| alanine racemase [Azorhizobium caulinodans ORS 571] gi|158329752|dbj|BAF87237.1| alanine racemase [Azorhizobium caulinodans ORS 571] Length = 381 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 2/74 (2%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-L 78 LA + TP + +N DG+ + LK + + + G+G Sbjct: 6 ALAD-LPTPCLILDEARMLRNIARLKTHLDGLGVALRPHLKTLKSVEAARRVLKDGNGPA 64 Query: 79 DIVSEGELRRALAA 92 + + E AA Sbjct: 65 TVSTLKEAEVFAAA 78 >gi|154251070|ref|YP_001411894.1| alanine racemase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154155020|gb|ABS62237.1| alanine racemase domain protein [Parvibaculum lavamentivorans DS-1] Length = 381 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 19/68 (27%), Gaps = 1/68 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 + TP A E+N + + + K + + K G+ G Sbjct: 20 AAIPTPALVLDLDAFERNVARMAEHCKVSNLSIRPHAKTHKCVTIAKAQIAAGAVGQCCA 79 Query: 82 SEGELRRA 89 GE Sbjct: 80 KLGEAEAM 87 >gi|260591838|ref|ZP_05857296.1| arginine 2-monooxygenase [Prevotella veroralis F0319] gi|260536122|gb|EEX18739.1| arginine 2-monooxygenase [Prevotella veroralis F0319] Length = 630 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 66/323 (20%), Positives = 108/323 (33%), Gaps = 30/323 (9%) Query: 28 PFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKANSNQAVIKTLAHLG---- 75 P ++ F A D + Y +K N Q V++ + G Sbjct: 59 PVLLRFPDILDNRIEKTSSCFEKAKKEYDFKAENFIIYPIKVNQMQPVVEEIISHGRKFN 118 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL+ S+ EL +A ++ ++ K I+LAL + + E Sbjct: 119 LGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNEID 178 Query: 136 RAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 KK + + I ++ + K +G KFG+ ++ Sbjct: 179 LIARAAKKLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALETLDAKGLHD 238 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI +I A LR G+N+ +D GGGLG+ Y Sbjct: 239 SLRLIHFHIGSQITKIRRIQTALNEAAQYYVNLRKMGYNVDFVDCGGGLGVDYDGTRSSS 298 Query: 252 SSSDYASLIHQYFGNL--------------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 S S I +Y + II E GR L A +LV V+ Sbjct: 299 SESSVNYSIQEYVNDCVYTFVDAANKSDIPHPNIITESGRSLSAHHSVLVIDVLETASLP 358 Query: 298 DKTFVILDVAMNDFMRPTLYDAY 320 + + + + LYD + Sbjct: 359 EMSEDFEAKETDHQLVKDLYDIW 381 >gi|226227945|ref|YP_002762051.1| hypothetical protein GAU_2539 [Gemmatimonas aurantiaca T-27] gi|226091136|dbj|BAH39581.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 397 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 24/84 (28%), Gaps = 1/84 (1%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 A +++ ++TP + N + + +K + + + Sbjct: 15 AGGIAVATYLEQLETPVPVVDLDRLAHNLDRMAAYVTLHGLKLRPHVKTHKSPRIAAEQL 74 Query: 73 HLGS-GLDIVSEGELRRALAAPVP 95 LG+ GL + E Sbjct: 75 RLGAVGLSCATLREAEVMSEVCDD 98 >gi|88810930|ref|ZP_01126186.1| Arginine decarboxylase [Nitrococcus mobilis Nb-231] gi|88791469|gb|EAR22580.1| Arginine decarboxylase [Nitrococcus mobilis Nb-231] Length = 639 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 109/317 (34%), Gaps = 32/317 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LKAN 62 V L +LAH ++ P + AF YA +K N Sbjct: 44 VDLYELAHEIRRAGLAWPVLVRFINILHDRVERLCRAFRQAMITHGYAGSYTAVYPIKVN 103 Query: 63 SNQAVIKTL---AHLGSGLDIVSEGELRRALAAPVPAERIVFS---GVGKTIDEIDLALQ 116 + V++ + A GL+ S+ EL A+A P RI+ + + Sbjct: 104 QQRRVVQEILAGADNHVGLECGSKPELMGAIAVAPPGGRIICNGYKDREYIRLALRSRQL 163 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 VE SEL+ + + LG + + RV + + G+K Sbjct: 164 GLDCWIVVEKCSELELIIAESRRLGVEPRLGLRVRLASIGEGKWQNTGGEKSKFGLSAAQ 223 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + + + + + H+GSQI I + + +L G I +DV Sbjct: 224 ALAVVERLRAVDRLASLQMLHFHLGSQIPNIADIQRGIREAARYYVELHRLGAPIGCVDV 283 Query: 237 GGGLGIAYHSDH------RPPSSSDYASLIHQ-------YFGNLQCKIILEPGRFLVADV 283 GGGLG+ Y + +YA I G I+ E GR + A Sbjct: 284 GGGLGVDYEGTRSRSFCSMNYTVEEYAHNIVHTLGELASAAGLDHPDIVTESGRAMTAHH 343 Query: 284 GILVTKVISIKKSADKT 300 +L+T V+ + + + T Sbjct: 344 AVLITDVVDVDRIPETT 360 >gi|321472267|gb|EFX83237.1| hypothetical protein DAPPUDRAFT_301907 [Daphnia pulex] Length = 1581 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 21/288 (7%), Positives = 47/288 (16%), Gaps = 8/288 (2%) Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 S+ IK G LD + + + + C Sbjct: 958 FSSVEEIKCPEQCGMHLDC---DHICNRICHMRSSHAKMPCTQPCRRFTCPEKHPCPKQC 1014 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 + + + + + + + K + + Sbjct: 1015 YEECGKCLVDVFPKVVTLPDCGHKVEIACSDNPETAFCPKPCDTRLDCGHQCTELCHKCH 1074 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 + + H + +H G G Sbjct: 1075 EDCDLCITKINRQLPCGHSQVAECSPVVEQAQVEKFLQECPHKCRANLPCEH-SCKGSCG 1133 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 ++ + I P V ++ Sbjct: 1134 QCFNGRLHKACEEKCGRTLVCGHNCGVNCAISCPPCKEVCQYRCRHSRCRKKCCEPCVDC 1193 Query: 302 VILDVAMNDFMRP----TLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 V + Y + H + G IC Sbjct: 1194 VEPCGWKCEHYSCSLKCFEYCNRPRCDEPCRKRLPCGHSCVGLCGEIC 1241 >gi|271502137|ref|YP_003335163.1| arginine decarboxylase [Dickeya dadantii Ech586] gi|270345692|gb|ACZ78457.1| arginine decarboxylase [Dickeya dadantii Ech586] Length = 658 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 115/308 (37%), Gaps = 35/308 (11%) Query: 20 KLAHVVQT--------PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANS 63 LA +V+T P ++ + + AF + Y +K N Sbjct: 71 DLAKLVKTRQQDNQRLPALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQ 130 Query: 64 NQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 ++ VI++L + G GL+ S+ EL L ++ K + I LAL Sbjct: 131 HRRVIESLINSGEPLGLEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLG 190 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQI 178 V E + + + ++ + R+ + + K S+G ++ KFG+ Q+ Sbjct: 191 HKVYLVIEKMSEIKLVLEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQV 250 Query: 179 HSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 L + + + H+GSQ+ I + +L G NIQ DVG Sbjct: 251 LQLVELLRNANRLDSLQLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVG 310 Query: 238 GGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADVG 284 GGLG+ Y ++YA+ + +G +I E GR + A Sbjct: 311 GGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEYGLPHPMVITESGRAVTAHHT 370 Query: 285 ILVTKVIS 292 +LV+ +I Sbjct: 371 VLVSNIIG 378 >gi|300722029|ref|YP_003711309.1| arginine decarboxylase, PLP-binding, biosynthetic [Xenorhabdus nematophila ATCC 19061] gi|297628526|emb|CBJ89096.1| arginine decarboxylase, PLP-binding, biosynthetic [Xenorhabdus nematophila ATCC 19061] Length = 634 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 71/311 (22%), Positives = 115/311 (36%), Gaps = 34/311 (10%) Query: 16 VSLEKLAHVVQ-------TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALK 60 V L L VQ P ++ + + AF D + Y +K Sbjct: 44 VELADLVKKVQEEKEHLRLPALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIK 103 Query: 61 ANSNQAVIKTL--AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 N + VI+TL A GL+ S+ EL LA ++ K + I LAL Sbjct: 104 VNQQRRVIETLANADEPVGLEAGSKAELMAVLAHAGMTGTVIVCNGYKDREYIRLALIGE 163 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPI 175 V E + + + K+ + R+ + + K ++G ++ KFG+ Sbjct: 164 KLGHKVYLVIEKMSEIELVLEEAKRLNVIPRLGVRARLASQGSGKWQASGGEKSKFGLAA 223 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 Q+ L ++ + + + H+GSQ+ I + +L G NIQ Sbjct: 224 SQVLQLIETLRSVGRLDSLQLLHFHLGSQLANIRDVATGVRESARFYVELSKLGVNIQCF 283 Query: 235 DVGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVA 281 DVGGGLG+ Y ++YA+ + G +I E GR L A Sbjct: 284 DVGGGLGVDYEGTRSQSECSVNYGLNEYANNVIWGIGDACEEHGLPHPTVITESGRALTA 343 Query: 282 DVGILVTKVIS 292 +LV+ VI Sbjct: 344 HHTVLVSNVIG 354 >gi|331694412|ref|YP_004330651.1| alanine racemase domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326949101|gb|AEA22798.1| alanine racemase domain protein [Pseudonocardia dioxanivorans CB1190] Length = 374 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 22/67 (32%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP+ + +N + + +K + + + + G+ GL + + E Sbjct: 26 TPYLAVDLDVLTRNLDRAAEHARAAGLRLRPHVKTHKSPEIARRQVEAGAVGLTVATVSE 85 Query: 86 LRRALAA 92 A Sbjct: 86 AEIFCRA 92 >gi|77164082|ref|YP_342607.1| arginine decarboxylase [Nitrosococcus oceani ATCC 19707] gi|254435104|ref|ZP_05048611.1| arginine decarboxylase [Nitrosococcus oceani AFC27] gi|76882396|gb|ABA57077.1| arginine decarboxylase [Nitrosococcus oceani ATCC 19707] gi|207088215|gb|EDZ65487.1| arginine decarboxylase [Nitrosococcus oceani AFC27] Length = 629 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 112/299 (37%), Gaps = 29/299 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVC--------YALKANSNQAVIKTLAH---LGS 76 P + + + AF T Y +K N + VI+ + Sbjct: 62 PVLVRFSGILHHRAKSLRTAFTKAMTATHYQGFFSAVYPIKVNQQRQVIQEILAADSEHL 121 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL +A P ++ +G K + I LAL + E + + Sbjct: 122 GLEAGSKPELLAVMALSRPGALVICNG-YKDREYIRLALMGRQLGLRIYLVVEKPSELEH 180 Query: 137 AVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG-VK 192 + + + + + + K +TG ++ KFG+ Q+ + + Sbjct: 181 IIHQAQALKVEPLLGVRVRLASIGKGKWQNTGGEKGKFGLSAEQVLMMIQRLRQIGMLHC 240 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH---- 248 ++ + H+GSQ+ I + + LR G ++ +DVGGGLG+ Y H Sbjct: 241 LTLLHFHMGSQLPNIADIQRGIREAGRYYATLRELGVPLRSVDVGGGLGVDYDGTHTRGL 300 Query: 249 --RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + +YA I + +II E GR +VA IL++ +I I+ + Sbjct: 301 CSTNYTLPEYAHKIVHGLWEICEAHQLPHPEIITEAGRAMVAHHAILISNIIDIQPAPG 359 >gi|238787356|ref|ZP_04631155.1| Biosynthetic arginine decarboxylase [Yersinia frederiksenii ATCC 33641] gi|238724618|gb|EEQ16259.1| Biosynthetic arginine decarboxylase [Yersinia frederiksenii ATCC 33641] Length = 659 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 117/310 (37%), Gaps = 33/310 (10%) Query: 16 VSLEKLAHVVQT------PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L +L +Q P ++ + + AF D + Y +K Sbjct: 70 VDLAQLVKRMQLEQGQRLPALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKV 129 Query: 62 NSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 N ++ VI++L + G GL+ S+ E+ LA ++ K + I LAL Sbjct: 130 NQHRRVIESLVNSGEPLGLEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEK 189 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIH 176 V E + + + ++ + R+ + + K ++G ++ KFG+ Sbjct: 190 LGHKVYLVIEKMSEIKMVLEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSAT 249 Query: 177 QIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q+ L ++ + + H+GSQ+ I + +L G NIQ D Sbjct: 250 QVLQLVDMLREANSLESLQLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFD 309 Query: 236 VGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVAD 282 VGGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 VGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAH 369 Query: 283 VGILVTKVIS 292 +LV+ VI Sbjct: 370 HTVLVSNVIG 379 >gi|251788148|ref|YP_003002869.1| arginine decarboxylase [Dickeya zeae Ech1591] gi|247536769|gb|ACT05390.1| arginine decarboxylase [Dickeya zeae Ech1591] Length = 658 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 115/308 (37%), Gaps = 35/308 (11%) Query: 20 KLAHVVQT--------PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANS 63 LA +V+T P ++ + + AF + Y +K N Sbjct: 71 DLAKLVKTRQQDNQRLPALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQ 130 Query: 64 NQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 ++ VI++L + G GL+ S+ EL L ++ K + I LAL Sbjct: 131 HRRVIESLINSGEPLGLEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLG 190 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQI 178 V E + + + ++ + R+ + + K S+G ++ KFG+ Q+ Sbjct: 191 HKVYLVIEKMSEIKLVLEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQV 250 Query: 179 HSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 L + + + H+GSQ+ I + +L G NIQ DVG Sbjct: 251 LQLVELLRNANRLDSLQLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVG 310 Query: 238 GGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADVG 284 GGLG+ Y ++YA+ + +G +I E GR + A Sbjct: 311 GGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEYGLPHPMVITESGRAVTAHHT 370 Query: 285 ILVTKVIS 292 +LV+ +I Sbjct: 371 VLVSNIIG 378 >gi|38037092|gb|AAR08423.1| arginine decarboxylase 2 [Pringlea antiscorbutica] Length = 711 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 99/301 (32%), Gaps = 29/301 (9%) Query: 15 NVSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMV 55 ++ L K+ V Q P ++ +AFD Sbjct: 89 DIDLLKIVKKVTDPKSSGGLGLQLPLIVRFPDVLKNRLECLQSAFDCAIQSLGYDSHYQG 148 Query: 56 CYALKANSNQAVIKTLAHLGS----GLDIVSEGE--LRRALAAPVPAERIVFSGVGKTID 109 + +K N ++ V++ + GS GL+ S+ E L + + + K + Sbjct: 149 VFPVKCNQDRFVVEDIVRFGSPFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFKDAE 208 Query: 110 EIDLALQSG----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 + LAL +E E EL + + + + I R + H ++G Sbjct: 209 YVSLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSG 268 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 +K + + + T + + HIGSQI L +L Sbjct: 269 EKGKFGLTTTQIVRVMGKLSQTGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELV 328 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGI 285 G +++ ID+GGGLGI Y S A + +Y + + R V I Sbjct: 329 RLGAHMKVIDIGGGLGIDYDGSKCGESDLSVAYTLEEYAEAVVASVRYVCDRRSVKHPVI 388 Query: 286 L 286 Sbjct: 389 C 389 >gi|317401723|gb|EFV82343.1| metal-activated pyridoxal enzyme [Achromobacter xylosoxidans C54] Length = 379 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 20/62 (32%), Gaps = 1/62 (1%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSE 83 V TP A E N D + + KA+ + + LG+ G+ Sbjct: 24 VDTPSLVLDLAAFEANLRAMQAWADRHEVALRPHAKAHKCPEIARRQLALGARGICCQKV 83 Query: 84 GE 85 E Sbjct: 84 SE 85 >gi|119963284|ref|YP_946033.1| alanine racemase N-terminal domain-containing protein [Arthrobacter aurescens TC1] gi|119950143|gb|ABM09054.1| putative alanine racemase, N-terminal domain protein [Arthrobacter aurescens TC1] Length = 366 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 24/68 (35%), Gaps = 1/68 (1%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLD 79 + V TP +++N + G + +K + + + G+ G+ Sbjct: 4 IPAEVITPAVLIDVDVLDRNIERMAGNMRGRGLQLRPHVKTHKTLEIARKQLAAGALGIT 63 Query: 80 IVSEGELR 87 + + GE Sbjct: 64 VATIGEAE 71 >gi|330953042|gb|EGH53302.1| arginine decarboxylase [Pseudomonas syringae Cit 7] Length = 637 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 114/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSKYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE++ + Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRMAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR G + +IDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA I E GR L A +LV +V ++K D+ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDEV 369 Query: 301 FVILD--VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I D +I + H +DI Sbjct: 370 PEIADKATLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIA 412 >gi|328950147|ref|YP_004367482.1| Biosynthetic arginine decarboxylase [Marinithermus hydrothermalis DSM 14884] gi|328450471|gb|AEB11372.1| Biosynthetic arginine decarboxylase [Marinithermus hydrothermalis DSM 14884] Length = 630 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 66/339 (19%), Positives = 122/339 (35%), Gaps = 34/339 (10%) Query: 15 NVSLEKLAHVV---QTPF--YCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKA 61 VSL ++ + PF +E + AF Y +K Sbjct: 45 GVSLLEVVRRLEDEGRPFPMILRFPQILEARVRELNEAFRAAIAKYGYQGAYQGVYPVKV 104 Query: 62 NSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 N + V++T+A G GL+ S+ EL LA + + +V K D + LAL Sbjct: 105 NQRRVVVETIARAGRPYAFGLEAGSKAELALILAQELAEDALVTCNGFKDEDFVRLALMG 164 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA---NTHKKISTGKKEDKFGIP 174 V E R + + + + + + + S+G + KFG+ Sbjct: 165 KKLGKRVVITLEKFAELARVLRVAHELGVRPLLGLRFKLRAKGSGQWASSGGEGAKFGLS 224 Query: 175 IHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 ++ + + + + HIGSQI I A + QLR G I++ Sbjct: 225 APEVLRAVEVLREVGMLDSLVMLHAHIGSQITDIRRIKAAVREAAQTYVQLRRLGAPIRY 284 Query: 234 IDVGGGLGIAYHSDHR------PPSSSDYASL-------IHQYFGNLQCKIILEPGRFLV 280 +++GGGL + Y ++ +YA + + ++ E GR L Sbjct: 285 LNLGGGLAVDYDGSKSAFYASANYTTWEYAEDLVYVTKEVADQHREVHPILVTESGRALT 344 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 A +LV +VI + + + V + + ++ + Sbjct: 345 AYHSVLVLQVIDVIRPPGEAAVEVPEDAHQLVKDLEEEY 383 Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 11/84 (13%) Query: 332 DRLHIHADIVGPICET---GDFIA--LNR----KIALPRPGD--LLYIEKTGAYGAVQSG 380 +R A IV C++ D + I RPG+ L + TGAY V Sbjct: 488 ERPTREATIVDISCDSDGKIDRFIDLKDVRHTLPIHDLRPGEPYYLGVFLTGAYQDVLGS 547 Query: 381 TYNSRLLIPEIMVNGSQFHIIRPR 404 T+N + E V + + R Sbjct: 548 THNLFGRVLEAHVRVEEHGFVVER 571 >gi|261823135|ref|YP_003261241.1| arginine decarboxylase [Pectobacterium wasabiae WPP163] gi|261607148|gb|ACX89634.1| arginine decarboxylase [Pectobacterium wasabiae WPP163] Length = 659 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 109/292 (37%), Gaps = 27/292 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLG--SG 77 P ++ + + AF + Y +K N ++ VI++LA+ G G Sbjct: 88 PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 L+ S+ EL L ++ K + I LAL V E + + Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRMV 207 Query: 138 VSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK-I 193 + ++ + R+ + + K S+G ++ KFG+ Q+ L + + Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAVQVLQLVEMLREAGKLDSL 267 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + H+GSQ+ I + +L G NIQ DVGGGLG+ Y Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 254 ------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGILVTKVIS 292 ++YA+ + G +I E GR + A +LV+ +I Sbjct: 328 SVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAHHTVLVSNIIG 379 >gi|319785767|ref|YP_004145242.1| arginine decarboxylase [Pseudoxanthomonas suwonensis 11-1] gi|317464279|gb|ADV26011.1| arginine decarboxylase [Pseudoxanthomonas suwonensis 11-1] Length = 629 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 103/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLA---HLGS 76 P + +AF Y +K N ++ V TLA G Sbjct: 59 PLLLRFPDILGDRLAQLQSAFALAMDDVGYAGGYTAVYPIKVNQHRGVAGTLAGHHGEGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A +V K + I LAL E + + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLVVCNGYKDREYIRLALIGRKLGLETFIVIEKPSELRL 177 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 178 VMEEARALGVQPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQLLDLWKNLRDSGMTDC 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 + + H+GSQI + + +L G I+++DVGGGLGI Y Sbjct: 238 LQLLHFHMGSQISNVRDIANGMREAVRYFSELSRLGAKIRYMDVGGGLGIDYEGTRSRSE 297 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YA+ I G +I+ E GR + A +LV I ++++ + Sbjct: 298 CSINYGLHQYAANIVQPLAEACAEQGLPAPRIVTECGRAMTAHHAVLVADTIEVEQAPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 358 RVPDAHDDEPAAIRHLRELH 377 >gi|146305762|ref|YP_001186227.1| arginine decarboxylase [Pseudomonas mendocina ymp] gi|145573963|gb|ABP83495.1| arginine decarboxylase [Pseudomonas mendocina ymp] Length = 637 Score = 48.3 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 108/298 (36%), Gaps = 27/298 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AVI+ + ++ Sbjct: 70 PLLVRFPDILQDRVRRLTGAFDASIARLDYQSRYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE++ + Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVRLV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L I RV A++ + G+K + + + + I Sbjct: 190 IEEAADLKVAPQIGLRVRLSSLASSKWADTGGEKSKFGLSAAQILQVVERFKAAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI I + K F+ +LR+ G + HIDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANIADYRKGFREAIRYYGELRAMGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 DYA I E GR + A +L+ +V +++ D Sbjct: 310 SINYDMQDYADAVVDMLKEFCDRQEIPHPHIFSESGRAMTAHHAVLLVQVTDVERHND 367 >gi|126331122|ref|XP_001371993.1| PREDICTED: similar to Fraser syndrome 1 [Monodelphis domestica] Length = 3967 Score = 48.3 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 31/267 (11%), Positives = 55/267 (20%), Gaps = 12/267 (4%) Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S E V I K + +L G C S + + Sbjct: 270 SSPCEFCICNRGQVT-CHIGECATVKCTQDEELIHLEGKCCPECVSRHQHCLYEEHIKDG 328 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + ++ +A + + + + +P Sbjct: 329 ERWNEGPCKMCECQDAQVICYQPSCLLCPVGTLAVEMMGQCCPACKPVPCHPDCLTCSES 388 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 D + Q R GGL +A + ++ S Sbjct: 389 PDHCDLCQDP-------GKKLQNGRCVYSCDPGFYQSGGLCLACQQECATCTNGFECSSC 441 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 + + + GR D + S T N F Sbjct: 442 QPSLLMKERQCVAACGRGFYQDHHQCLGCHKSCATCWGPTEKNCLSCKNQFQMLREGFCE 501 Query: 321 HEINYIVNPAGDRLHIHADIVGPICET 347 + D+ P CET Sbjct: 502 GGCIQELYKKSG----ICDVCDPSCET 524 >gi|301059307|ref|ZP_07200234.1| alanine racemase, N-terminal domain protein [delta proteobacterium NaphS2] gi|300446536|gb|EFK10374.1| alanine racemase, N-terminal domain protein [delta proteobacterium NaphS2] Length = 370 Score = 48.3 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 43/137 (31%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 +++ + TPF ++ N + V +K + + A+ + +G Sbjct: 8 ISNEIPTPFILVDEGIVKSNLRRIHDYAHRHGFSVRAHVKTHKSLALARMQMAMGDVSIA 67 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 V++ E + + + V +A +G + V +SE + Sbjct: 68 VAKAEEAQVMVGLGHVDITVAYPAVGKARAEKIARLAGTHKIGVAVDSEYVMKGLEDAAT 127 Query: 141 GKKAPIAFRVNPDINAN 157 I V D + Sbjct: 128 AYGVEIGISVMLDAGLH 144 >gi|90577958|ref|ZP_01233769.1| threonine aldolase, low-specificity [Vibrio angustum S14] gi|90441044|gb|EAS66224.1| threonine aldolase, low-specificity [Vibrio angustum S14] Length = 368 Score = 48.3 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 21/69 (30%), Gaps = 1/69 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + TP ++ N D + + KA+ + + K G+ G+ Sbjct: 3 IAQLPTPALIVDFDKMKNNIHEMQQRIDALQLNLRPHTKAHKSPTIAKMQIDAGAQGICT 62 Query: 81 VSEGELRRA 89 GE Sbjct: 63 AKLGEAEVM 71 >gi|40526|emb|CAA38538.1| diaminopimelate decarboxylase [Corynebacterium glutamicum] gi|433535|emb|CAA79711.1| diaminopimelate decarboxylase [Corynebacterium glutamicum] Length = 49 Score = 48.3 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 7/27 (25%), Positives = 10/27 (37%) Query: 7 FEGSLHAENVSLEKLAHVVQTPFYCYS 33 +G + V L LA TP + Sbjct: 23 EDGVVTVAGVPLPDLAEEYGTPLFVVD 49 >gi|149196616|ref|ZP_01873670.1| arginine decarboxylase [Lentisphaera araneosa HTCC2155] gi|149140296|gb|EDM28695.1| arginine decarboxylase [Lentisphaera araneosa HTCC2155] Length = 631 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 71/344 (20%), Positives = 114/344 (33%), Gaps = 33/344 (9%) Query: 28 PFYCYSTTAIEKNYL----TFSNAFDGMDTMVCY----ALKANSNQAVIKTLAHLGS--- 76 P + F NA M+ CY +K N + V++ + GS Sbjct: 57 PVVIRFHDVLRAQVRNLNLAFDNAIKEMEYQGCYRGVYPIKVNQMREVVEEIVDAGSEFD 116 Query: 77 -GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID----LALQSGIYCFNVESESELK 131 GL+ S+ E+ ALA E + K + + +E+ SEL Sbjct: 117 FGLEAGSKPEILAALAYNTNKESLTILNGYKDEEYMRLALLGVKMGRQCIVVIENFSELN 176 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 L + + + I R+ + K S+ + KFG+ I +I + Sbjct: 177 LLLKVSKQENIRPLIGLRLKLSSESRG-KWASSSGENAKFGLSILEIIKSLKVLEEENML 235 Query: 192 K-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH----- 245 + + H+GSQI I++ +A + ++ G NI+++D GGGL I Y Sbjct: 236 DCLKLLHFHMGSQIADIKTIKEAIIEGSRVYAKIAKMGFNIEYLDAGGGLAIDYDGSRSS 295 Query: 246 -SDHRPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVIS--IKK 295 R +YA I I+ E GR + A +VT VI K Sbjct: 296 KDSSRNYRLDEYAMDLVLSIKQICDDEEVAHPTIVTESGRAITAHHSCVVTNVIDIKKKH 355 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 D + IN I A+ Sbjct: 356 HEDFEIQVQSSDHYLLQNMRSTLEELSINNCQEMLNTAKQIKAE 399 >gi|268316970|ref|YP_003290689.1| arginine decarboxylase [Rhodothermus marinus DSM 4252] gi|262334504|gb|ACY48301.1| arginine decarboxylase [Rhodothermus marinus DSM 4252] Length = 653 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 59/334 (17%), Positives = 104/334 (31%), Gaps = 41/334 (12%) Query: 16 VSLEKLAHV------VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LKA 61 + L ++ P + + AF YA +K Sbjct: 54 IDLLEVIERLRAQHVHP-PVLLRFQDLLRTRVQQLNRAFRRAIAETGYANTYRGVYPIKV 112 Query: 62 NSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 N + V++ + G+ GL+ S+ EL L + ++ K + L L Sbjct: 113 NQLREVVEEILEAGAPFSFGLECGSKSELLATLPYLDRDDMLLICNGCKDRAMMQLILAG 172 Query: 118 GIYCFNVESESELK---------TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 V E ++ G A R+ S G+ Sbjct: 173 QRLGKKVIPVIERMAEFRLLLEALEDRSLPQAGVPAIFGVRLRLSATGAGLWSESGGETS 232 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 + L GV + + H+GSQI + +A + +LR G Sbjct: 233 KFGLSLSELLGLLDRIGDGHSGVSLQLLHFHMGSQIAHLAHIREAVTEAARIYARLRKRG 292 Query: 229 HNIQHIDVGGGLGIAYH------SDHRPPSSSDYAS-------LIHQYFGNLQCKIILEP 275 I ++D+GGGLG+ Y S +YA + + G +I E Sbjct: 293 LGITYLDIGGGLGVTYEAGNPDAPGSIDYSLGEYAHTVVATVQQVCEAEGVPPPVLISES 352 Query: 276 GRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 GR L A + VT+V+ + + + ++ Sbjct: 353 GRALTAYHSVFVTEVLDTRSRHYELPAWANGGIH 386 >gi|298488969|ref|ZP_07006992.1| Biosynthetic arginine decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156467|gb|EFH97564.1| Biosynthetic arginine decarboxylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 637 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 74/344 (21%), Positives = 118/344 (34%), Gaps = 31/344 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ----SGIYCFNVESESELKT 132 GL+ S+ EL L A P + K + I LAL +E ESE++ Sbjct: 130 GLEAGSKPELMAVL-ALAPKSGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVEL 188 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + + A L + RV A++ + G+K + + + Sbjct: 189 VIEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQG 248 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH---- 248 I + H+GSQI + + FK +LR G + +IDVGGGLG+ Y H Sbjct: 249 IRLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNA 308 Query: 249 --RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 DYA I E GR L A +LV +V ++K D+ Sbjct: 309 SSINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDE 368 Query: 300 TFVILD--VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I D +I + H +DI Sbjct: 369 VPEISDKESLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIA 412 >gi|326381918|ref|ZP_08203611.1| hypothetical protein SCNU_03202 [Gordonia neofelifaecis NRRL B-59395] gi|326199344|gb|EGD56525.1| hypothetical protein SCNU_03202 [Gordonia neofelifaecis NRRL B-59395] Length = 354 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 24/70 (34%), Gaps = 1/70 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TPF +++N ++ + + K + + + G+ GL + + GE Sbjct: 4 TPFLFVDVDRLDRNLTAMADWAERHGIRLRPHAKTHKCAEIARRQLEAGAVGLSVATIGE 63 Query: 86 LRRALAAPVP 95 V Sbjct: 64 AEIFAELGVD 73 >gi|284172920|ref|YP_003406301.1| alanine racemase [Haloterrigena turkmenica DSM 5511] gi|284017680|gb|ADB63628.1| alanine racemase domain protein [Haloterrigena turkmenica DSM 5511] Length = 371 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 2/76 (2%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL--GSGLD 79 ++TP A+E+N ++ D D + +K + N + + G G+ Sbjct: 9 VEDLETPALLVDIDAMERNIEEYAAVADENDVTLRSHIKTHKNAELAALEDEMTDGGGIC 68 Query: 80 IVSEGELRRALAAPVP 95 + GE+ + Sbjct: 69 CQTLGEVETMARNGID 84 >gi|270159139|ref|ZP_06187795.1| putative metal-activated pyridoxal enzyme [Legionella longbeachae D-4968] gi|289166027|ref|YP_003456165.1| alanine racemase [Legionella longbeachae NSW150] gi|269987478|gb|EEZ93733.1| putative metal-activated pyridoxal enzyme [Legionella longbeachae D-4968] gi|288859200|emb|CBJ13132.1| putative alanine racemase [Legionella longbeachae NSW150] Length = 374 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 32/337 (9%), Positives = 89/337 (26%), Gaps = 14/337 (4%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 + TP ++ N + + K + + G+ G+ + Sbjct: 12 ELDTPCLVIDKNILKTNLEKMKKHGIENEINIKPHCKTHKCSKLAGLQIEYGAIGVCVAK 71 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + +P I+ + T ++I + + + K G Sbjct: 72 ISEAEVLIKEEIP--NILITSPVITKNKISRLIACLEKAPSTMVVVDSKENILALNEAGA 129 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + V DI+ + + F + ++ L+ + + Sbjct: 130 RHNKRIHVLLDIDPGIGRTGIKPEHALNFARELQRLPWLHLMGVQCYAGNLQHIPSFNER 189 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGH--------NIQHIDVGGGLGIAYHSDHRPPSSS 254 + +++ A +++++L + + I+ I S Sbjct: 190 RERSLQTMQMASEVVKNLKRSGFNCPILTGTGTGTYDIDIEATEVTEIQPGSYTVMDVQY 249 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + + ++++ V + KS + + + + Sbjct: 250 TNIGSRNNDKQFDLFRPAMTLLTTVISNNRTEHVTVDAGTKSIYVDHLKPKIISHQGLTY 309 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADI---VGPICETG 348 E I +L ++ V P C+ Sbjct: 310 DWGGFGDEHGKISAKDCSKLPTLGEVIELVVPHCDPT 346 >gi|282857080|ref|ZP_06266327.1| metal-activated pyridoxal enzyme [Pyramidobacter piscolens W5455] gi|282585089|gb|EFB90410.1| metal-activated pyridoxal enzyme [Pyramidobacter piscolens W5455] Length = 369 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 19/73 (26%), Gaps = 1/73 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 + TP + N N + + K + A+ G G+ + Sbjct: 5 ELDTPALLVDREIMMDNIRAMQNRANRKGVALRPHTKTHKTPAIALIQRDCGCKGIAVAK 64 Query: 83 EGELRRALAAPVP 95 GE A Sbjct: 65 LGEAEVMADAGFD 77 >gi|260914641|ref|ZP_05921107.1| arginine 2-monooxygenase [Pasteurella dagmatis ATCC 43325] gi|260631240|gb|EEX49425.1| arginine 2-monooxygenase [Pasteurella dagmatis ATCC 43325] Length = 614 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 75/339 (22%), Positives = 126/339 (37%), Gaps = 37/339 (10%) Query: 16 VSLEKLAHV--------VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYAL 59 VSL KLA + T +C+ I+ + + AF + + Y + Sbjct: 25 VSLAKLAEKAQKEQGAHLPT-LFCF-PQIIQHRLCSINQAFQQARENFGYEGNYFLVYPI 82 Query: 60 KANSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 K N ++ VI++L + G GL+ S+ EL LA + ++ K + I AL Sbjct: 83 KVNQHRRVIESLINSGQTLGLEAGSKAELMAVLAHAGVTQTVIVCNGYKDREYIRFALMG 142 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIP 174 V E + Q + K + R+ + + K S+G ++ KFG+ Sbjct: 143 EKLGHKVYLVIEKLSEIQLVLEEAAKLNVKPRLGVRARLASQGSGKWQSSGGEKSKFGLS 202 Query: 175 IHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 Q+ SL + + + H+GSQ+ I + +L G NIQ Sbjct: 203 ASQVLSLVNMLKEHDCLDCLQLLHFHLGSQLGNIRDVATGVRESARFYVELHKLGVNIQC 262 Query: 234 IDVGGGLGIAYHSDHRPPSS------SDYASLIHQYFGN-------LQCKIILEPGRFLV 280 DVGGGLG+ Y + ++YA + G II E GR + Sbjct: 263 FDVGGGLGVDYEGNRTQSDCSVNYGLNEYADTVVWGIGQACRESGLPHPTIITESGRGVT 322 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 A +LV+ VI I++ + + + Sbjct: 323 AHHAVLVSNVIGIERYKPEPLSAPEKDAPSVLHSMWETW 361 >gi|153865083|ref|ZP_01997738.1| hypothetical protein BGS_0150 [Beggiatoa sp. SS] gi|152145421|gb|EDN72261.1| hypothetical protein BGS_0150 [Beggiatoa sp. SS] Length = 86 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 9/85 (10%) Query: 334 LHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY----GAVQS-GTYNSRLLI 388 + + GP+C ++ D++ I Y G + + + + Sbjct: 1 MENPITLGGPLCTRMQVSTTKGELPEANINDIISIY----YSCADGFSANLFYFLTAPMP 56 Query: 389 PEIMVNGSQFHIIRPRMTFQELIEL 413 E +V Q + R R T ++ + L Sbjct: 57 AEDIVQNGQHFVARRRGTKEDFLSL 81 >gi|304312431|ref|YP_003812029.1| Arginine decarboxylase [gamma proteobacterium HdN1] gi|301798164|emb|CBL46386.1| Arginine decarboxylase [gamma proteobacterium HdN1] Length = 633 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 63/311 (20%), Positives = 99/311 (31%), Gaps = 33/311 (10%) Query: 16 VSLEKLAHVVQT--PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQ 65 V + +A P + AF + Y +K N Q Sbjct: 45 VDVVDMAREKGLRLPLLIRFAGILSDRVRRLCKAFSESMADLDYNGSYTLVYPIKVNQQQ 104 Query: 66 AVIKTLA-------HLGSGLDIVSEGELRRALAAPVPAERIVFS---GVGKTIDEIDLAL 115 +V++ + +GL+ S+ EL LA IV + + Sbjct: 105 SVVQEIVNTKVDIPRCSAGLEAGSKPELMAVLAMAREGSTIVCNGYKDREYIRLALIGEK 164 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 VE SEL+ + + A + I R + + + + + G+K Sbjct: 165 TGRKVYIVVEKLSELQLILEEAEEMQVTPRIGLRTRLNSHGKGNWQNTGGEKSKFGLAAT 224 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 I L ++ + + H+GSQI I K +LR G +Q ID Sbjct: 225 QIIKVLAVLRASGKLDCLQLLHFHLGSQISNIRDIQAGMKEAARYFSELRLAGAGVQCID 284 Query: 236 VGGGLGIAYHSDH------RPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVAD 282 VGGGLG+ Y S +YA I E GR + A Sbjct: 285 VGGGLGVDYEGTRSRSNCSMNYSMEEYAYAIVQALRNTCDEHDLDMPDIFTESGRAVTAH 344 Query: 283 VGILVTKVISI 293 +LV+ VI Sbjct: 345 HAVLVSNVIGC 355 >gi|56708932|ref|YP_164977.1| threonine aldolase, low-specificity [Ruegeria pomeroyi DSS-3] gi|56680617|gb|AAV97282.1| threonine aldolase, low-specificity [Ruegeria pomeroyi DSS-3] Length = 387 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 4/69 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLD 79 A +QTP A+E+N + K + + V K LG G+ Sbjct: 24 AAEIQTPCLVLDLDALERNVKKMGDYAKAHGMRHRVHGKMHKSVDVAKLQERLGGAVGVC 83 Query: 80 I--VSEGEL 86 VSE E+ Sbjct: 84 CQKVSEAEV 92 >gi|307265382|ref|ZP_07546939.1| alanine racemase domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306919666|gb|EFN49883.1| alanine racemase domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 373 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 1/65 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 + TP + +E N ++ + +K + + A+ K + GS G + + Sbjct: 6 ELPTPSFLVDLDKLESNIKEMADTCRKNGKELWPMVKTHKSTAIAKMQQNYGSKGFLVGT 65 Query: 83 EGELR 87 E Sbjct: 66 IDEAE 70 >gi|325859676|ref|ZP_08172806.1| arginine 2-monooxygenase [Prevotella denticola CRIS 18C-A] gi|325482602|gb|EGC85605.1| arginine 2-monooxygenase [Prevotella denticola CRIS 18C-A] Length = 630 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 106/323 (32%), Gaps = 30/323 (9%) Query: 28 PFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKANSNQAVIKTLAHLG---- 75 P ++ F A + Y +K N Q V++ + G Sbjct: 59 PVLLRFPDILDNRIEKTSSCFEKARKEYGFKAENFIIYPIKVNQMQPVVEEIISHGRKFN 118 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL+ S+ EL +A ++ ++ K I+LAL + + E Sbjct: 119 LGLEAGSKPELHAVIAVQCQSDSLIVCNGYKDQSYIELALLAQKMGKRIFIVVEKLNEID 178 Query: 136 RAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 KK + + I ++ + K +G KFG+ ++ Sbjct: 179 LIARAAKKLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALETLDEKGLHD 238 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI +I A LR G+ + +D GGGLG+ Y Sbjct: 239 CLHLIHFHIGSQITKIRRIQTALNEAAQYYVNLRRMGYGVDFVDCGGGLGVDYDGTRSSN 298 Query: 252 SSSDYASLIHQYFGNL--------------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 S S I +Y + II E GR L A +LV V+ Sbjct: 299 SESSVNYSIQEYVNDCVYTFVDAADKNGIPHPNIITESGRSLSAHHSVLVIDVLETASLP 358 Query: 298 DKTFVILDVAMNDFMRPTLYDAY 320 + + + + LYD + Sbjct: 359 EMSEEFEAKETDHQLVKDLYDIW 381 >gi|256822352|ref|YP_003146315.1| arginine decarboxylase [Kangiella koreensis DSM 16069] gi|256795891|gb|ACV26547.1| arginine decarboxylase [Kangiella koreensis DSM 16069] Length = 644 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 69/353 (19%), Positives = 109/353 (30%), Gaps = 40/353 (11%) Query: 18 LEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSN 64 L ++ Q P + + AF+ +CY +K N Sbjct: 51 LSEICKELQKKGFQMPALLRFGDILHNRVNSLCEAFNQAIKEYEFQGRYTICYPIKVNQQ 110 Query: 65 QAVIKTL----------AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 + V++ + GL+ S+ EL LA + K + I A Sbjct: 111 RRVVEEIVQSQAAINNNNDKQIGLEAGSKPELMAVLALSEHTNSTIVCNGYKDREYIRTA 170 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKF 171 L V E T Q + + + + + K ++G KF Sbjct: 171 LIGTQLGHKVYIVVEKLTELQLVLEEAESMGVKPTIGVRARLASKGESKWQTSGGDHSKF 230 Query: 172 GIPIHQIHSLYAYASTLPGVKISG-VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 G+ QI L V I + H+GSQI I A K +L + G Sbjct: 231 GLSASQILRLVETLQASDQVDIFKLLHFHLGSQITSIRDIQNALKECARFYAELHALGVP 290 Query: 231 IQHIDVGGGLGIAYHSDHRPPSS------SDYASLIHQYFGN-------LQCKIILEPGR 277 ++ +DVGGGLG+ Y S+YA+ + F + II E GR Sbjct: 291 VETVDVGGGLGVDYEGTRSQSHCSINYSLSEYANNVVWAFYDVANENDLPHPNIITESGR 350 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA 330 L A +L+ VI + + +N N Sbjct: 351 ALTAHHAVLIANVIDSEAPEKVELEAPSEEAPLVLHNLWESYQEAMNTKDNRK 403 >gi|70922820|ref|XP_734515.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56507329|emb|CAH84777.1| hypothetical protein PC301232.00.0 [Plasmodium chabaudi chabaudi] Length = 194 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 28/95 (29%) Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 V + S + + +++ R +Y + D Sbjct: 100 VVSIHDNKYNYYSYYITDSIYGCFSGIIFDEYSRHPIYIINNNKMDSKQMILDSPLYLTK 159 Query: 340 IVGPICETGDFIALNRKIALPRPGDLLYIEKTGAY 374 I G C+ D I + + D + E +GAY Sbjct: 160 IYGQSCDGLDMITSSTYLPECNINDWIIYEYSGAY 194 >gi|289207388|ref|YP_003459454.1| arginine decarboxylase [Thioalkalivibrio sp. K90mix] gi|288943019|gb|ADC70718.1| arginine decarboxylase [Thioalkalivibrio sp. K90mix] Length = 634 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 106/326 (32%), Gaps = 42/326 (12%) Query: 15 NVSLEKLA-----HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKA 61 V L +LA V P ++ + AFD + Y +K Sbjct: 45 GVDLYELAGRLREEHVGPPVLVRFQDVLDGRVRRLARAFDAAARELEYEGAFTAIYPIKV 104 Query: 62 NSNQAVIKTLAHLGS-----------GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDE 110 N ++V+ + G GL+ S+ EL LA P + K + Sbjct: 105 NQQRSVVDQILAAGDQPDAEGLTPRVGLEAGSKPELMAVLAQSRPGA-AIICNGYKDREY 163 Query: 111 IDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKK 167 + LAL V E + + + + + + + + K +TG + Sbjct: 164 VRLALIGRQLGHRVYIVIEKPSELEEVIRQAEAMQVEPLLGLRVRLASIGKGKWQNTGGE 223 Query: 168 EDKFGIPIHQIHSLYAYASTLPG-VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 + KFG+ + + L ++ + H+GSQI I L Sbjct: 224 KAKFGLSAADVLGILGRLRGLGWLDRLQLLHFHMGSQIANIRDIQNGMGEAASYFAALTE 283 Query: 227 NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN-------------LQCKIIL 273 G ++ +DVGGGLGI Y S S+ ++ Sbjct: 284 AGAALRVVDVGGGLGIDYEGSRSRNECSINYSVEEYALNILRPLKRICEEQGLAMPEVFS 343 Query: 274 EPGRFLVADVGILVTKVISIKKSADK 299 E GR L A +L+T VI + + Sbjct: 344 ESGRALTAHHAVLITNVIDCEPAPGD 369 >gi|303238034|ref|ZP_07324577.1| arginine 2-monooxygenase [Prevotella disiens FB035-09AN] gi|302481824|gb|EFL44876.1| arginine 2-monooxygenase [Prevotella disiens FB035-09AN] Length = 630 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 66/323 (20%), Positives = 103/323 (31%), Gaps = 30/323 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLG---- 75 P ++ S+ F+ + + Y +K N Q V+ + G Sbjct: 59 PVLLRFPDILDNRIEMTSSCFEIAKKEYDYKGENFIIYPIKVNQMQPVVDEIISHGRKFN 118 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIYCFNVESESELK 131 GL+ S+ EL +A ++ + K I+LA VE +E+ Sbjct: 119 LGLEAGSKPELHAVIAVQCQSDSPIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNEID 178 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + A L K I R+ + S G + +L Sbjct: 179 IIAKAAKKLNVKPNIGIRIKLASTGSGKWSESGGDASKFGLTASELLQALDILDEKGLHD 238 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI +I A LR G+N+ +D GGGLGI Y Sbjct: 239 CLRLIHFHIGSQITKIRRIQTALTEAAQYYANLRKMGYNVDFVDCGGGLGIDYDGTRSSS 298 Query: 252 SSSDYASLIHQY--------------FGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 S S I +Y II E GR + A ILV V+ Sbjct: 299 SESSINYTIQEYVNDCVCTFVDASNKHNIPHPNIITESGRSVAAHHSILVIDVLETASLP 358 Query: 298 DKTFVILDVAMNDFMRPTLYDAY 320 + + + LY + Sbjct: 359 EMDEEFEAKETDHQLVRELYKIW 381 >gi|223558062|gb|ACM91067.1| arginine decarboxylase [uncultured bacterium 34R1] Length = 606 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 97/293 (33%), Gaps = 24/293 (8%) Query: 16 VSLEKL-----AHVVQTPFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKAN 62 V L + A + +P ++ F A + V Y +K N Sbjct: 12 VDLIDVMDELRARNITSPILLRFPDILDNRIEKISSCFKKAAKEYEYKAENFVIYPIKVN 71 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELR---RALAAPVPAERIVFSGVGKTIDEIDLA- 114 + V++ + G GL+ S+ EL A + A ++ K ++LA Sbjct: 72 QMRQVVEEIVGHGKKFNIGLEAGSKPELHAVLAINMADISANSLIICNGYKDKGYVELAL 131 Query: 115 ---LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF 171 VE +ELK + A LG + + R+ + + + S G + Sbjct: 132 LAQKMGRRIFLVVEKPNELKLIADVAKQLGIRPNVGVRIKLSSSGSGKWEESGGDRSKFG 191 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 +L + + HIGSQ+ +I A + QL G ++ Sbjct: 192 LNTSELFTALDFLKENKMMDCLKLIHFHIGSQVTKIRRIKNALREASQFYVQLTKMGFDL 251 Query: 232 QHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVG 284 +D+GGGLG+ Y S I +Y + + + + Sbjct: 252 DFVDIGGGLGVDYDGSRNSASGHSMNYTIQEYVNDAVYTFVDACEKNAIKHPN 304 >gi|85059996|ref|YP_455698.1| arginine decarboxylase [Sodalis glossinidius str. 'morsitans'] gi|84780516|dbj|BAE75293.1| biosynthetic arginine decarboxylase [Sodalis glossinidius str. 'morsitans'] Length = 640 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 66/362 (18%), Positives = 123/362 (33%), Gaps = 37/362 (10%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V L +L Q P ++ + + AF + Y +K N Sbjct: 52 VDLAELVKQRQADGQRLPALFCFPQILQHRLRSINAAFQRARDSFGYQGGYFLVYPIKVN 111 Query: 63 SNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 ++ VI++L + G GL+ S+ EL +A ++ K + I LAL Sbjct: 112 QHRRVIESLVNSGEPLGLEAGSKAELMAVIAHAGMTRTVIVCNGYKDREYIRLALIGEKI 171 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQ 177 V E + + ++ + R+ + + K S+G ++ KFG+ Q Sbjct: 172 GHKVYLVIEKLSEITLVLEEAERLNVVPRLGVRTRLASQGSGKWQSSGGEKSKFGLAAAQ 231 Query: 178 IHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L + + + H+GSQ+ I + +L G I+ DV Sbjct: 232 VLQLVDLLRAKGRLDSLQLLHFHLGSQLSNIRDIASGVRESARFYVELHKLGVRIECFDV 291 Query: 237 GGGLGIAYHSDHRP------PSSSDYASLIHQ-------YFGNLQCKIILEPGRFLVADV 283 GGGLG+ Y ++YA+ + +G +I E GR + A Sbjct: 292 GGGLGVDYEGTRSQSDGSANYGLNEYANNVIWGIGDACNEYGLPHPTVITESGRAVTAHH 351 Query: 284 GILVTKVISIKKSADKTFV-----ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +LV+ VI ++++ + + + D Sbjct: 352 TVLVSNVIGVERNEFSEPHPPEADAPRALESLWQTWQEMQEPRNRRSLREWLHDSQMDLH 411 Query: 339 DI 340 D+ Sbjct: 412 DV 413 >gi|299472468|emb|CBN77253.1| Ornithine decarboxylase [Ectocarpus siliculosus] Length = 320 Score = 47.9 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%) Query: 333 RLHIHADIVGPICETGDFIALNRKIA-LPRPG-DLLYIEKTG 372 R + + GP C+ D + ++ PG D L+ G Sbjct: 237 RNELPCTVWGPTCDGLDCVCRMTQLPDDMEPGRDWLFFPDVG 278 >gi|157164932|ref|YP_001467250.1| putative GlnD family protein [Campylobacter concisus 13826] gi|112801837|gb|EAT99181.1| metal-activated pyridoxal enzyme [Campylobacter concisus 13826] Length = 368 Score = 47.9 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 19/69 (27%), Gaps = 1/69 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + TP + KN D + + K + K G+ G+ + Sbjct: 3 IAEIDTPALLIDKDIVLKNLEKMQKYADKFNVSLRPHTKTHKMPYFAKLQVKCGAKGITV 62 Query: 81 VSEGELRRA 89 GE Sbjct: 63 AKVGEAEVM 71 >gi|223936213|ref|ZP_03628126.1| alanine racemase domain protein [bacterium Ellin514] gi|223895075|gb|EEF61523.1| alanine racemase domain protein [bacterium Ellin514] Length = 368 Score = 47.9 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 1/71 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 V TP A++ N + F + + K++ +++ G+ G+ Sbjct: 15 AEVDTPSLLLDADALQANIDRMAAFFVNRPSGLRPHFKSHKCTKIVRLQMQAGAVGITCA 74 Query: 82 SEGELRRALAA 92 GE A Sbjct: 75 KLGEAEVLADA 85 >gi|221133566|ref|ZP_03559871.1| arginine decarboxylase [Glaciecola sp. HTCC2999] Length = 644 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 105/299 (35%), Gaps = 29/299 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLG---- 75 P + + + AF+ Y +K N + V++ + G Sbjct: 68 PVVVRFHDVLRAQVVHLNKAFNKCIQEANYQGQYRGVYPVKVNQMREVVEEIVDAGKEYH 127 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL----QSGIYCFNVESESELK 131 GL+ S+ EL LA E + K + ++LA VE SE+ Sbjct: 128 YGLEAGSKAELITILAYNTTPEALTVLNGYKDEEFVNLAFLAQKLGRKVLIVVEKFSEIA 187 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 T+ + A LG+ I R + + S G + I++ A G Sbjct: 188 TIIKIANELGEMPMIGLRAKMSVKGRGKWEGSGGDRAKFGLTISEIINAGKTLADAGMGE 247 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH--- 248 + + HIGSQ+ I + +A + +LR G N++++D+GGGLGI Y Sbjct: 248 SLKLLHFHIGSQLTDIRAVKEAINEGALIYAELRHLGFNLEYVDIGGGLGIDYDGTKSTN 307 Query: 249 ---------RPPSSSDYASLIHQ-YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + Y ++ E GR + A ++T+++ + Sbjct: 308 DSSRNYSIEEYVADVVYGMQEVCDLEKVPHPTLVSESGRAITAHHSCVITEIMGEIRPD 366 >gi|167909410|ref|ZP_02496501.1| pyridoxal-dependent decarboxylase family protein [Burkholderia pseudomallei 112] Length = 212 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP Y + + Y A T + +LKANS+ + ++ G+++ S+GE Sbjct: 27 TPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQGE 83 Query: 86 L 86 L Sbjct: 84 L 84 >gi|302185179|ref|ZP_07261852.1| arginine decarboxylase [Pseudomonas syringae pv. syringae 642] Length = 637 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 114/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSKYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE++ + Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR G + +IDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA I E GR L A +LV +V ++K D+ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDEV 369 Query: 301 FVILD--VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I D +I + H +DI Sbjct: 370 PEIADKASLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIA 412 >gi|66047608|ref|YP_237449.1| arginine decarboxylase [Pseudomonas syringae pv. syringae B728a] gi|63258315|gb|AAY39411.1| Arginine decarboxylase [Pseudomonas syringae pv. syringae B728a] gi|330969417|gb|EGH69483.1| arginine decarboxylase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 637 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 114/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSKYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE++ + Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR G + +IDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA I E GR L A +LV +V ++K D+ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDEV 369 Query: 301 FVILD--VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I D +I + H +DI Sbjct: 370 PEIADKASLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIA 412 >gi|330873614|gb|EGH07763.1| arginine decarboxylase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 637 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 115/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE++ + Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR G + +IDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA I E GR L A +LV +V ++K D+ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDEV 369 Query: 301 FVI--LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I + +I + H +DI Sbjct: 370 PKIADKESLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIA 412 >gi|330867156|gb|EGH01865.1| arginine decarboxylase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330871044|gb|EGH05753.1| arginine decarboxylase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 637 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 115/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE++ + Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR G + +IDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA I E GR L A +LV +V ++K D+ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDEV 369 Query: 301 FVILD--VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I D +I + H +DI Sbjct: 370 PEISDKESLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIA 412 >gi|170047366|ref|XP_001851194.1| ornithine decarboxylase [Culex quinquefasciatus] gi|167869851|gb|EDS33234.1| ornithine decarboxylase [Culex quinquefasciatus] Length = 430 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 108/351 (30%), Gaps = 27/351 (7%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 + + K + + Y + +N + +I T A L G S+ E+ + Sbjct: 39 LHLTELDCVVKRHYDWLRNLPR--VRPYYTVGSNDDVRIIGTTALLDCGYVCSSKAEVLK 96 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 L V ++ VG + + A + + +SE EL+ ++Q Sbjct: 97 VLEFRVDPGVVLLERVGGNAELLRFARRKDVR-VVFDSEEELRMIHQYFPEAEVLIRFRL 155 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 ++ + G + + + G + GS Sbjct: 156 S-----------------EDVQPGCQADGEARDLLNLAKELNMDVIGWCFNAGSSCCDPA 198 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 F+ A R++T G N + I++G G+ + +S +L + Sbjct: 199 IFYTAISKGREITDHATIVGFNFKFINLGVGVCGQKDVQGQRYASYINRALEDYFPERRG 258 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN 328 I E G F A +T + + ++ + ++ + H + + + Sbjct: 259 WTIAAEVGSFHSAAAVTAITAIRGKRIFWNQRHPSRIDQVFYYVSGRVERTSHSLIHASD 318 Query: 329 PAGDRLHIHADIVGPIC-----ETG--DFIALNRKIALPRPGDLLYIEKTG 372 P + D G C E G + I + + D + E G Sbjct: 319 PVCPIVWKDRDECGVECRTTLYEAGSDECICKDLLLPELNENDFMVFESQG 369 >gi|71734047|ref|YP_276540.1| arginine decarboxylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257483361|ref|ZP_05637402.1| arginine decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627378|ref|ZP_06460332.1| arginine decarboxylase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647847|ref|ZP_06479190.1| arginine decarboxylase [Pseudomonas syringae pv. aesculi str. 2250] gi|71554600|gb|AAZ33811.1| arginine decarboxylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322720|gb|EFW78813.1| arginine decarboxylase [Pseudomonas syringae pv. glycinea str. B076] gi|320330495|gb|EFW86474.1| arginine decarboxylase [Pseudomonas syringae pv. glycinea str. race 4] gi|330987584|gb|EGH85687.1| arginine decarboxylase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012576|gb|EGH92632.1| arginine decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 637 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 115/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE++ + Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR G + +IDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA I E GR L A +LV +V ++K D+ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDEV 369 Query: 301 FVILD--VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I D +I + H +DI Sbjct: 370 PEISDKESLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIA 412 >gi|28871957|ref|NP_794576.1| biosynthetic arginine decarboxylase [Pseudomonas syringae pv. tomato str. DC3000] gi|213968024|ref|ZP_03396170.1| biosynthetic arginine decarboxylase [Pseudomonas syringae pv. tomato T1] gi|301383659|ref|ZP_07232077.1| arginine decarboxylase [Pseudomonas syringae pv. tomato Max13] gi|302063182|ref|ZP_07254723.1| arginine decarboxylase [Pseudomonas syringae pv. tomato K40] gi|302131262|ref|ZP_07257252.1| arginine decarboxylase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|46397730|sp|Q87VU3|SPEA_PSESM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|28855210|gb|AAO58271.1| biosynthetic arginine decarboxylase [Pseudomonas syringae pv. tomato str. DC3000] gi|213927367|gb|EEB60916.1| biosynthetic arginine decarboxylase [Pseudomonas syringae pv. tomato T1] gi|331014720|gb|EGH94776.1| arginine decarboxylase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 637 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 115/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE++ + Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR G + +IDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA I E GR L A +LV +V ++K D+ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDEV 369 Query: 301 FVI--LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I + +I + H +DI Sbjct: 370 PKIADKESLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIA 412 >gi|330887965|gb|EGH20626.1| arginine decarboxylase [Pseudomonas syringae pv. mori str. 301020] Length = 637 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 115/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE++ + Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR G + +IDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA I E GR L A +LV +V ++K D+ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDEV 369 Query: 301 FVILD--VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I D +I + H +DI Sbjct: 370 PEISDKESLPETVQWLGDLLGPTDIEMVTETYWRATHYMSDIA 412 >gi|238759316|ref|ZP_04620482.1| Biosynthetic arginine decarboxylase [Yersinia aldovae ATCC 35236] gi|238702477|gb|EEP95028.1| Biosynthetic arginine decarboxylase [Yersinia aldovae ATCC 35236] Length = 659 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 67/363 (18%), Positives = 122/363 (33%), Gaps = 38/363 (10%) Query: 16 VSLEKLAH----VVQT--PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L +L P ++ + + AF D + Y +K Sbjct: 70 VDLAQLVKGMQLEQGQRLPALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKV 129 Query: 62 NSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 N ++ VI++L + G GL+ S+ E+ LA ++ K + I LAL Sbjct: 130 NQHRRVIESLVNSGEPLGLEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEK 189 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIH 176 V E + + + ++ + R+ + + K ++G ++ KFG+ Sbjct: 190 LGHKVYLVIEKMSEIKMVLEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSAT 249 Query: 177 QIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q+ L ++ + + H+GSQ+ I + +L G NIQ D Sbjct: 250 QVLQLVDMLRKANSLESLQLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFD 309 Query: 236 VGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVAD 282 VGGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 VGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAH 369 Query: 283 VGILVTKVIS-----IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH 337 +LV+ VI + + + + D Sbjct: 370 HTVLVSNVIGVERNEFSEPQAPEEDAPRALESLWDTWQEMQEPENRRSLREWLHDSQMDL 429 Query: 338 ADI 340 D+ Sbjct: 430 HDV 432 >gi|330938314|gb|EGH41959.1| arginine decarboxylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 637 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 115/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE++ + Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR G + +IDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA I E GR L A +LV +V ++K D+ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDEV 369 Query: 301 FVILD--VAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I D +I + H +DI Sbjct: 370 PEIADKASLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIA 412 >gi|325268245|ref|ZP_08134878.1| arginine 2-monooxygenase [Prevotella multiformis DSM 16608] gi|324989387|gb|EGC21337.1| arginine 2-monooxygenase [Prevotella multiformis DSM 16608] Length = 671 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 106/323 (32%), Gaps = 30/323 (9%) Query: 28 PFYCYSTTAIEKNYLT----FSNAFDGMDTM----VCYALKANSNQAVIKTLAHLG---- 75 P ++ F A + Y +K N Q V++ + G Sbjct: 100 PVLLRFPDILDNRIEKTSSCFEKARKEYGFKAENFIIYPIKVNQMQPVVEEIISHGRKFN 159 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL+ S+ EL +A ++ ++ K I+LAL + + E Sbjct: 160 LGLEAGSKPELHAVIAVQCQSDSLIVCNGYKDQSYIELALLAQKMGKRIFIVVEKLNEID 219 Query: 136 RAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 KK + + I ++ + K +G KFG+ ++ Sbjct: 220 LIARAAKKLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALETLDGKGLHD 279 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI +I A LR G+ + +D GGGLG+ Y Sbjct: 280 CLHLIHFHIGSQITKIRRIQTALNEAAQYYVNLRRMGYGVDFVDCGGGLGVDYDGTRSSN 339 Query: 252 SSSDYASLIHQYFGNL--------------QCKIILEPGRFLVADVGILVTKVISIKKSA 297 S S I +Y + II E GR L A +LV V+ Sbjct: 340 SESSVNYSIQEYVNDCVYTFVDAADKNGIPHPNIITESGRSLSAHHSVLVIDVLETASLP 399 Query: 298 DKTFVILDVAMNDFMRPTLYDAY 320 + + + + LYD + Sbjct: 400 EMSEEFEAKETDHQLVKDLYDIW 422 >gi|296532599|ref|ZP_06895304.1| alanine racemase domain protein [Roseomonas cervicalis ATCC 49957] gi|296267090|gb|EFH13010.1| alanine racemase domain protein [Roseomonas cervicalis ATCC 49957] Length = 352 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 2/77 (2%) Query: 20 KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GL 78 LA ++TP +E N D + +K + A+ + LG+ G+ Sbjct: 2 DLAS-LETPVPVIDLDVVEANLARMQAYCDSHGIALRPHIKTHKLPALARRQVELGARGI 60 Query: 79 DIVSEGELRRALAAPVP 95 GE + A + Sbjct: 61 TCQKLGEAEVMVEAGID 77 >gi|330959984|gb|EGH60244.1| arginine decarboxylase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 637 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 116/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLDYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE++ + Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR G + +IDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA G I E GR L A +LV +V ++K D+ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDEV 369 Query: 301 FVI--LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I + +I + H +DI Sbjct: 370 PEIADKESLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIA 412 >gi|253690067|ref|YP_003019257.1| arginine decarboxylase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756645|gb|ACT14721.1| arginine decarboxylase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 660 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 101/292 (34%), Gaps = 27/292 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLG--SG 77 P ++ + + AF + Y +K N ++ VI++LA+ G G Sbjct: 88 PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID----LALQSGIYCFNVESESELKTL 133 L+ S+ EL L ++ K + I +E SE++ + Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRLV 207 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + R + + S G+K I + + + Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQVLQLVEMLREAGKLDSL 267 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + H+GSQ+ I + +L G NIQ DVGGGLG+ Y Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 254 ------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGILVTKVIS 292 ++YA+ + G +I E GR + A +LV+ +I Sbjct: 328 SVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAHHTVLVSNIIG 379 >gi|237798392|ref|ZP_04586853.1| arginine decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021244|gb|EGI01301.1| arginine decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 637 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 116/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE++ + Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR G + +IDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA G I E GR L A +LV +V ++K D+ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDEV 369 Query: 301 FVI--LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I + +I + H +DI Sbjct: 370 PEIADKESLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIA 412 >gi|256824351|ref|YP_003148311.1| amino acid aldolase or racemase [Kytococcus sedentarius DSM 20547] gi|256687744|gb|ACV05546.1| predicted amino acid aldolase or racemase [Kytococcus sedentarius DSM 20547] Length = 371 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 20/69 (28%), Gaps = 1/69 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TPF ++ N + + K + + G+ GL + + GE Sbjct: 11 TPFAVVDRDRLQANIDRVARLAADRGQALRPHAKTHKCPQIAALQLEAGASGLTVATLGE 70 Query: 86 LRRALAAPV 94 A Sbjct: 71 AEVFADAGC 79 >gi|78222124|ref|YP_383871.1| arginine decarboxylase [Geobacter metallireducens GS-15] gi|123572446|sp|Q39X78|SPEA_GEOMG RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|78193379|gb|ABB31146.1| arginine decarboxylase [Geobacter metallireducens GS-15] Length = 635 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 101/252 (40%), Gaps = 21/252 (8%) Query: 16 VSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 + L L ++ P ++ + AF Y +K N Sbjct: 43 IDLRALVDDLIKRKIKPPILLRFMDVLQGRIAAINRAFKYAIDENDYPSTYQTFYPIKVN 102 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 + V++ +A G G+++ S+ EL ++ + K + I+ L + Sbjct: 103 QQRQVVEAIAKFGKRYNIGIEVGSKPELVIGISFATGNGIPIICNGYKDKEYIETVLYAT 162 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPI 175 +++ E ++ ++L KK I ++ + + T K ++G ++ KFG+ + Sbjct: 163 KIGYDITIVVEKMFELEKIIALSKKTGIKPKLGIRVKLSSKGTGKWATSGGEDAKFGLRM 222 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 +I + + + + HIGSQI +I+ A + ++R G I+++ Sbjct: 223 SEIIAAIGLLEQNELLDSVKLIHFHIGSQITKIDKIKSALIEGTRVYAEMRKLGVGIEYV 282 Query: 235 DVGGGLGIAYHS 246 D+GGGLG+ Y Sbjct: 283 DIGGGLGVDYDG 294 >gi|209885817|ref|YP_002289674.1| metal-activated pyridoxal enzyme [Oligotropha carboxidovorans OM5] gi|209874013|gb|ACI93809.1| metal-activated pyridoxal enzyme [Oligotropha carboxidovorans OM5] Length = 366 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 6/69 (8%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFS---NAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-L 78 V+TP A++ N + +AF + KA+ + + G+ + Sbjct: 14 AQVETPALIVDLDAMQANIKALATRVSAFPSVRATPH--AKAHKCLEIARLQMAAGASRI 71 Query: 79 DIVSEGELR 87 + E+ Sbjct: 72 CCQNVAEVE 80 >gi|77456855|ref|YP_346360.1| arginine decarboxylase [Pseudomonas fluorescens Pf0-1] gi|77380858|gb|ABA72371.1| biosynthetic arginine decarboxylase [Pseudomonas fluorescens Pf0-1] Length = 637 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 115/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD Y +K N +AVI+ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIERLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE+ + Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVGLV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A SL K + RV A++ + G+K + + + + I Sbjct: 190 IEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR+ G + HIDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA I E GR L A +LV +V ++K D Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQALPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDDV 369 Query: 301 FV--ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + +I + H +D+ Sbjct: 370 PQIENKEALPETVQWLVDLLGPTDIEMVTETYWRATHYMSDVA 412 >gi|15600032|ref|NP_253526.1| arginine decarboxylase [Pseudomonas aeruginosa PAO1] gi|107103938|ref|ZP_01367856.1| hypothetical protein PaerPA_01005009 [Pseudomonas aeruginosa PACS2] gi|116052987|ref|YP_793305.1| arginine decarboxylase [Pseudomonas aeruginosa UCBPP-PA14] gi|218893933|ref|YP_002442802.1| arginine decarboxylase [Pseudomonas aeruginosa LESB58] gi|254244263|ref|ZP_04937585.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa 2192] gi|296391671|ref|ZP_06881146.1| arginine decarboxylase [Pseudomonas aeruginosa PAb1] gi|313109829|ref|ZP_07795764.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa 39016] gi|48474962|sp|Q9HUX1|SPEA_PSEAE RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|9951109|gb|AAG08224.1|AE004897_2 biosynthetic arginine decarboxylase [Pseudomonas aeruginosa PAO1] gi|115588208|gb|ABJ14223.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa UCBPP-PA14] gi|126197641|gb|EAZ61704.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa 2192] gi|218774161|emb|CAW29978.1| arginine decarboxylase (ADC) [Pseudomonas aeruginosa LESB58] gi|310882266|gb|EFQ40860.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa 39016] Length = 636 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 114/318 (35%), Gaps = 36/318 (11%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALK 60 G L +SL P ++ + AFD Y +K Sbjct: 60 GQLREAGLSL---------PLLVRFPDILQDRVRKLTGAFDANIERLEYQSRYTALYPIK 110 Query: 61 ANSNQAVIK-TLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 N +AV++ +A GL+ S+ EL LA IV +G + Sbjct: 111 VNQQEAVVENIIATENVSIGLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIKLALMGQ 170 Query: 118 ---GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E ESE++ + + A ++G + + RV A++ + G+K Sbjct: 171 KLGHNVFIVIEKESEVQLVIEEAANVGVQPQVGLRVRLSSLASSKWADTGGEKAKFGLSA 230 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + + + + H+GSQI + + FK +LR+ G + HI Sbjct: 231 AQLLSVVERFRQAGLDQGVRLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHI 290 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVA 281 DVGGGLG+ Y H DYA G I E GR L A Sbjct: 291 DVGGGLGVDYDGTHSRNASSINYDIDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRALTA 350 Query: 282 DVGILVTKVISIKKSADK 299 +L+T+V +++ D Sbjct: 351 HHAVLITQVTDVERHNDD 368 >gi|292493374|ref|YP_003528813.1| arginine decarboxylase [Nitrosococcus halophilus Nc4] gi|291581969|gb|ADE16426.1| arginine decarboxylase [Nitrosococcus halophilus Nc4] Length = 629 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 110/299 (36%), Gaps = 29/299 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVC--------YALKANSNQAVIKTLAH---LGS 76 P + + + AF Y +K N + V+K + Sbjct: 62 PVLVRFSGILHHRAKSLQTAFTEAMAATHYQGSFNAVYPIKVNQQRQVVKEILAADPEHM 121 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL +A P ++ +G K + I LAL + E + + Sbjct: 122 GLEAGSKPELLAVMALSRPGAPVICNG-YKDREYIRLALMGRQLGLRIYLVVEKPSELEH 180 Query: 137 AVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + + + K +TG ++ KFG+ Q+ ++ + + Sbjct: 181 IIREARALKVKPLLGVRVRLASIGKGKWQNTGGEKGKFGLSSAQVLTMLQRLRQMEMIDC 240 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQ+ I + + LR G ++ +DVGGGLG+ Y H Sbjct: 241 LTLLHFHMGSQLPNIADIQRGIREAGRYYATLRELGVPLRSVDVGGGLGVDYDGTHTRGF 300 Query: 253 S------SDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 S+YA I +II E GR + A +L++ +I + + Sbjct: 301 CSTNYTLSEYAHKIVHGLWEICDAHQLPHPEIITEAGRAMTAHHAVLISNIIDTQPAPG 359 >gi|255020460|ref|ZP_05292525.1| alanine racemase [Acidithiobacillus caldus ATCC 51756] gi|254970070|gb|EET27567.1| alanine racemase [Acidithiobacillus caldus ATCC 51756] Length = 365 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 84/348 (24%), Gaps = 26/348 (7%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN---QAVI-KTLAHLGS-GLDIVSEGE 85 C S +A+ N G + A+KAN+ AV LA G G + S E Sbjct: 8 CISASALAHNVAVARARMPG--AKLMAAVKANAYGHGLAVCAPELARAGVEGFAVASMEE 65 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 + + + +G + A + I + Q A ++ Sbjct: 66 AEQLYDLALGPSACLLAGPFAPGEIPLAAARGHILV--------IHRAAQLAWLQEQRWN 117 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + ++ F A P + + S Sbjct: 118 RPLSIWIKFDSG--------MHRLGFAPSALGPVFEALAAVQSPLRILGLMSHLARSDTP 169 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + R Q + G + + + + G Sbjct: 170 NDPHNTRQIREFRAAIGQWGERTLGEHSLANSGAVLALGEARFPWMRPGLMLYGLSPFPG 229 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + L P A + + + D + Sbjct: 230 QTGRDLGLRPVLSWQAQIIATRRLAPGEWLGYGAAYQAPHEQRVGVVACGYGDGFDRHLG 289 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGA 373 P + G + + D + ++ + + + GD + + GA Sbjct: 290 QGAPVWIGSQRSQTL-GRV--SMDLLFVDLQDSDAQEGDWVTLMGVGA 334 >gi|238795139|ref|ZP_04638729.1| Biosynthetic arginine decarboxylase [Yersinia intermedia ATCC 29909] gi|238725538|gb|EEQ17102.1| Biosynthetic arginine decarboxylase [Yersinia intermedia ATCC 29909] Length = 654 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 69/349 (19%), Positives = 126/349 (36%), Gaps = 34/349 (9%) Query: 16 VSLEKLAH----VVQT--PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L +L P ++ + + AF D + Y +K Sbjct: 65 VDLAQLVKGMQLEQGQRLPALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKV 124 Query: 62 NSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 N ++ VI++L + G GL+ S+ E+ LA ++ K + I LAL Sbjct: 125 NQHRRVIESLVNSGEPLGLEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEK 184 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIH 176 V E + + + ++ + R+ + + K ++G ++ KFG+ Sbjct: 185 LGHKVYLVIEKMSEIKMVLEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSAT 244 Query: 177 QIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q+ L ++ + + H+GSQ+ I + +L G NIQ D Sbjct: 245 QVLQLVDMLRDANSLESLQLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFD 304 Query: 236 VGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVAD 282 VGGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 305 VGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAH 364 Query: 283 VGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 +LV+ VI ++ + +L+D + E+ N Sbjct: 365 HTVLVSNVIGVE-RNEFNEPQPPATDAPRALESLWDTWLEMQEPENRRS 412 >gi|50122838|ref|YP_052005.1| arginine decarboxylase [Pectobacterium atrosepticum SCRI1043] gi|49613364|emb|CAG76815.1| biosynthetic arginine decarboxylase [Pectobacterium atrosepticum SCRI1043] Length = 659 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 101/292 (34%), Gaps = 27/292 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLG--SG 77 P ++ + + AF + Y +K N ++ VI++LA+ G G Sbjct: 88 PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID----LALQSGIYCFNVESESELKTL 133 L+ S+ EL L ++ K + I +E SE++ + Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRLV 207 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + R + + S G+K I + + + Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQVLQLVEMLREAGKLESL 267 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + H+GSQ+ I + +L G NIQ DVGGGLG+ Y Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 254 ------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGILVTKVIS 292 ++YA+ + G +I E GR + A +LV+ +I Sbjct: 328 SVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAHHTVLVSNIIG 379 >gi|254238439|ref|ZP_04931762.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa C3719] gi|126170370|gb|EAZ55881.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa C3719] Length = 636 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 114/318 (35%), Gaps = 36/318 (11%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALK 60 G L +SL P ++ + AFD Y +K Sbjct: 60 GQLREAGLSL---------PLLVRFPDILQDRVRKLTGAFDANIERLEYQNRYTALYPIK 110 Query: 61 ANSNQAVIK-TLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 N +AV++ +A GL+ S+ EL LA IV +G + Sbjct: 111 VNQQEAVVENIIATENVSIGLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIKLALMGQ 170 Query: 118 ---GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E ESE++ + + A ++G + + RV A++ + G+K Sbjct: 171 KLGHNVFIVIEKESEVQLVIEEAANVGVQPQVGLRVRLSSLASSKWADTGGEKAKFGLSA 230 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + + + + H+GSQI + + FK +LR+ G + HI Sbjct: 231 AQLLSVVERFRQAGLDQGVRLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHI 290 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVA 281 DVGGGLG+ Y H DYA G I E GR L A Sbjct: 291 DVGGGLGVDYDGTHSRNASSINYDIDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRALTA 350 Query: 282 DVGILVTKVISIKKSADK 299 +L+T+V +++ D Sbjct: 351 HHAVLITQVTDVERHNDD 368 >gi|118581018|ref|YP_902268.1| arginine decarboxylase [Pelobacter propionicus DSM 2379] gi|166979640|sp|A1AS90|SPEA_PELPD RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|118503728|gb|ABL00211.1| arginine decarboxylase [Pelobacter propionicus DSM 2379] Length = 635 Score = 47.5 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 124/315 (39%), Gaps = 30/315 (9%) Query: 18 LEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVI 68 ++ L ++ P +E + + F Y +K N + V+ Sbjct: 49 VDDLIKRKIKPPILLRFMNILEGRIASINRVFRNAIQTNNYPAQYQTFYPIKVNQQRQVV 108 Query: 69 KTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV 124 + +A+ G GL++ S+ EL A++ + K + I+ L + +N+ Sbjct: 109 EAIANFGKKYNIGLEVGSKPELVAAISISTNNSLPIICNGYKDTEFIETVLYATKIGYNI 168 Query: 125 ESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIHSL 181 E ++ + L +K I ++ + + T K ++G ++ KFG+ I +I + Sbjct: 169 TIVIEKLFELEKVIELSRKTGITPKLGIRVKLSSKGTGKWATSGGEDAKFGLRISEIITA 228 Query: 182 YAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + + + HIGSQ+ +I+ A + +++ G N+++ID+GGGL Sbjct: 229 IDLLKQYNLIDSVKLLHSHIGSQVTKIDKIKNALIEGARIYVEMKKLGVNLEYIDIGGGL 288 Query: 241 GIAYH------SDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGILV 287 G+ Y S +YA+ + N II E GR VA ++V Sbjct: 289 GVDYDGSKSSYFSSVNYSVEEYANDVIYQIKNICDEAGVDCPNIISESGRATVAHYSVMV 348 Query: 288 TKVISIKKSADKTFV 302 T +++ Sbjct: 349 TNILNTNTQNQMPDF 363 >gi|227326184|ref|ZP_03830208.1| arginine decarboxylase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 660 Score = 47.5 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 109/292 (37%), Gaps = 27/292 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLG--SG 77 P ++ + + AF + Y +K N ++ VI++LA+ G G Sbjct: 88 PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 L+ S+ EL L ++ K + I LAL V E + + Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRLV 207 Query: 138 VSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK-I 193 + ++ + R+ + + K S+G ++ KFG+ Q+ L + + Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQVLQLVEMLREAGRLDSL 267 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + H+GSQ+ I + +L G NIQ DVGGGLG+ Y Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 254 ------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGILVTKVIS 292 ++YA+ + G +I E GR + A +LV+ +I Sbjct: 328 SVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAHHTVLVSNIIG 379 >gi|114762422|ref|ZP_01441880.1| threonine aldolase, low-specificity [Pelagibaca bermudensis HTCC2601] gi|114545040|gb|EAU48044.1| threonine aldolase, low-specificity [Roseovarius sp. HTCC2601] Length = 387 Score = 47.5 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLD 79 A +QTP A+E+N + K + + V+K LG +G+ Sbjct: 24 AADIQTPALVLDLDALERNVKKMGDYAKAHGMRHRAHGKMHKSVDVLKLQMELGGAAGVC 83 Query: 80 I--VSEGEL 86 VSE E+ Sbjct: 84 CQKVSEAEV 92 >gi|70734181|ref|YP_257821.1| arginine decarboxylase [Pseudomonas fluorescens Pf-5] gi|68348480|gb|AAY96086.1| biosynthetic arginine decarboxylase [Pseudomonas fluorescens Pf-5] Length = 637 Score = 47.5 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 73/343 (21%), Positives = 116/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD Y +K N +AVI+ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIGRLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE+ + Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVGLV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A SL K + RV A++ + G+K + + + + I Sbjct: 190 IEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR+ G + HIDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA I E GR L A +LV +V ++K D Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDDV 369 Query: 301 FVILDVA--MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I + +I + H +D+ Sbjct: 370 PQIDNKQELPETVQWLVDLLGPTDIEMVTETYWRATHYMSDVA 412 >gi|91790640|ref|YP_551592.1| alanine racemase-like protein [Polaromonas sp. JS666] gi|91699865|gb|ABE46694.1| alanine racemase-like protein [Polaromonas sp. JS666] Length = 380 Score = 47.5 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 20/64 (31%), Gaps = 1/64 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP T +++N +K N V + L G+ G+ + + E Sbjct: 11 TPALLLDTARMDRNIERMRGRMTRHGVHFRPHVKTNKCMDVTQRLLDAGARGITVSTLRE 70 Query: 86 LRRA 89 Sbjct: 71 AEYF 74 >gi|146281364|ref|YP_001171517.1| arginine decarboxylase [Pseudomonas stutzeri A1501] gi|145569569|gb|ABP78675.1| biosynthetic arginine decarboxylase [Pseudomonas stutzeri A1501] Length = 637 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 110/305 (36%), Gaps = 27/305 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPGILQDRVRRLTGAFDANIERMEYAGKYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE+ + Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHKVFIVIEKESEVGLV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + RV A++ + G++ + + + + I Sbjct: 190 IEEANELKLTPQVGLRVRLSSLASSKWADTGGERSKFGLSAAQLLSVIERFRAAEMDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + + F+ +LR+ + +IDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYRQGFREAIRYYAELRALNLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 +YA + G I E GR + A +LV +V +++ D+ Sbjct: 310 SINYDIDEYAGTVVGMLKEFCEAQGLPHPNIFSESGRAMTAHHAVLVMQVTDVERHNDEV 369 Query: 301 FVILD 305 I + Sbjct: 370 PQIDN 374 >gi|94313121|ref|YP_586330.1| amino acid processing enzyme (aldolase or racemase) [Cupriavidus metallidurans CH34] gi|93356973|gb|ABF11061.1| amino acid processing enzyme (aldolase or racemase) [Cupriavidus metallidurans CH34] Length = 382 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 18/65 (27%), Gaps = 1/65 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDI 80 + TP +N A D + KA+ V + +A G+ Sbjct: 17 VDAIDTPSLVVDLDVFARNISRMQAAADAAGVKLRPHAKAHKCPDVSVAQIAQGAVGICC 76 Query: 81 VSEGE 85 E Sbjct: 77 QKVSE 81 >gi|7230375|gb|AAF42972.1|AF127241_1 arginine decarboxylase 2 [Nicotiana tabacum] Length = 721 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 95/277 (34%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGS--- 76 P ++ + +AFD G Y +K N ++ V++ + GS Sbjct: 113 PLVVRFPDVLKNRLESLQSAFDLAVHSQGYGAHYQGVYPVKCNQDRFVVEDIVKFGSPFR 172 Query: 77 -GLDIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 GL+ S+ EL A++ E ++ K + I LAL + N E E E Sbjct: 173 FGLEAGSKPELLLAMSCLCKGSAEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 232 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 233 LDLVIDISHKMAVRPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQIVRVVKKLEESGM 292 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI + +L G ++ ID+GGGLGI Y Sbjct: 293 LDCLQLLHFHIGSQIPSTGLLADGVGEAAQIYCELVRLGAGMKFIDIGGGLGIDYDGTKS 352 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S I +Y + + R V I Sbjct: 353 CDSDVSVGYGIQEYASAVVQAVQYVCDRKGVKHPVIC 389 >gi|307132688|ref|YP_003884704.1| biosynthetic arginine decarboxylase, PLP-binding protein [Dickeya dadantii 3937] gi|306530217|gb|ADN00148.1| biosynthetic arginine decarboxylase, PLP-binding protein [Dickeya dadantii 3937] Length = 658 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 114/308 (37%), Gaps = 35/308 (11%) Query: 20 KLAHVVQT--------PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANS 63 LA +V+T P ++ + + AF + Y +K N Sbjct: 71 DLAKLVKTRQQNNQRLPALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQ 130 Query: 64 NQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 ++ VI++L + G GL+ S+ EL L ++ K + I LAL Sbjct: 131 HRRVIESLINSGEPLGLEAGSKAELMAVLGHAGMTRSVIVCNGYKDREYIRLALIGEKLG 190 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQI 178 V E + + ++ + R+ + + K S+G ++ KFG+ Q+ Sbjct: 191 HKVYLVIEKMSEINMVLEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQV 250 Query: 179 HSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 L + + + H+GSQ+ I + +L G NIQ DVG Sbjct: 251 LQLVELLRKANRLDSLQLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVG 310 Query: 238 GGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADVG 284 GGLG+ Y ++YA+ + +G +I E GR + A Sbjct: 311 GGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEYGLPHPTVITESGRAVTAHHT 370 Query: 285 ILVTKVIS 292 +LV+ +I Sbjct: 371 VLVSNIIG 378 >gi|300113294|ref|YP_003759869.1| arginine decarboxylase [Nitrosococcus watsonii C-113] gi|299539231|gb|ADJ27548.1| arginine decarboxylase [Nitrosococcus watsonii C-113] Length = 629 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 105/298 (35%), Gaps = 27/298 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVC--------YALKANSNQAVIKTLAHLG---S 76 P + + + AF T Y +K N + VI+ + Sbjct: 62 PVLVRFSGILHHRAQSLRAAFTEAMTATHYQGSFSAVYPIKVNQQRQVIQEILAADSDRL 121 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG---IYCFNVESESELKTL 133 GL+ S+ EL +A P ++ +G + VE SEL+ + Sbjct: 122 GLEAGSKPELLAVMALSRPGALVICNGYKDREYIRLALMGRQLGLRIYLVVEKPSELEHI 181 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 ++A +L + + RV + + G+K + + + Sbjct: 182 IRQAQALKVEPLLGVRVRLASIGKGKWQNTGGEKGKFGLSAEQVLMMIQRLRQIGMIHCL 241 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + + H+GSQ+ I + + LR G ++ +DVGGGLG+ Y H Sbjct: 242 TLLHFHMGSQLPNIADIQRGIREAGRYYATLRELGVPLRSVDVGGGLGVDYDGTHTRGLC 301 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + +YA + +II E GR +VA IL++ +I I+ + Sbjct: 302 STNYTLPEYAHKIVHGLWETCETHQLPHPEIITEAGRAMVAHHAILISNIIDIQPAPG 359 >gi|253988569|ref|YP_003039925.1| arginine decarboxylase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780019|emb|CAQ83180.1| biosynthetic arginine decarboxylase [Photorhabdus asymbiotica] Length = 634 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 74/350 (21%), Positives = 129/350 (36%), Gaps = 35/350 (10%) Query: 16 VSLEKLAHVVQ-------TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALK 60 + L L VQ P ++ + + AF D + Y +K Sbjct: 44 IDLAGLVKRVQEEQKHLRLPALFCFPQILQHRLRSINAAFRRARESYGYKGDYFLVYPIK 103 Query: 61 ANSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 N + VI++LA G GL+ S+ EL LA ++ K + I LAL Sbjct: 104 VNQQRRVIESLASSGEPLGLEAGSKAELMAVLAHAGMTRTVIVCNGYKDREYIRLALIGE 163 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPI 175 V E + + + ++ + R+ + + K ++G ++ KFG+ Sbjct: 164 KLGHKVYLVIEKMSEIAQVLEEAERLNVIPRLGVRARLASQGSGKWQASGGEKSKFGLAA 223 Query: 176 HQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 Q+ L + + + + H+GSQ+ I + +L G NIQ Sbjct: 224 TQVLQLVETLREVGRLDSLQLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCF 283 Query: 235 DVGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVA 281 DVGGGLG+ Y ++YA+ + G +I E GR L A Sbjct: 284 DVGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACDEHGLPHPTVITESGRALTA 343 Query: 282 DVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 +LV+ VI ++ + T V +L++ + E++ N Sbjct: 344 HHTVLVSNVIGVE-RNEFTQTTPPVEDASRPLASLWETWQEMHSEGNRRS 392 >gi|218883962|ref|YP_002428344.1| Orn/DAP/Arg decarboxylase 2 [Desulfurococcus kamchatkensis 1221n] gi|218765578|gb|ACL10977.1| Orn/DAP/Arg decarboxylase 2 [Desulfurococcus kamchatkensis 1221n] Length = 592 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 98/318 (30%), Gaps = 33/318 (10%) Query: 7 FEGSLHA----ENVSLEKLAHVVQTPF---YCYSTTAIEKNYLTFSNAFDGMDTMVC--- 56 EG L + + ++ L F Y IE+ T AF + V Sbjct: 35 EEGYLVISLGEQKIRVKNLLEKHG--FDVAYIRVLPLIERAIRTVYEAFTEL-AKVHGFK 91 Query: 57 ------YALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGK 106 + +K N + VI + G G + S GEL RI+ Sbjct: 92 GSLQPVFPMKVNPIEVVIDAIWRYGEKYKWGFNTGSLGELELLSKYLEKGGRILIYDGVV 151 Query: 107 TIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK 166 + + + ++ + V + E + + +S + I R+ P S G Sbjct: 152 SDSVMKILVRFKENGWRVIIDVESE-HDLDILSKYPEFEIGLRIKPLFRPGGKWAHSAGL 210 Query: 167 KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 + + Y ++ + ++ TQ Sbjct: 211 EGKFGLTVNTLVKLREEYKWIEERGRLLHIHPGSQIYKWSDM-EAFINEVYNIFTQLQSH 269 Query: 227 NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN--------LQCKIILEPGRF 278 +I+ +D+GGGL Y S LI + ++ E GR+ Sbjct: 270 GFPSIEIVDLGGGLAYPYLDTRDGTIESPDYGLIEYFNHILKIFSRLEKHPTLVYEGGRY 329 Query: 279 LVADVGILVTKVISIKKS 296 +V+ ILV KV+ I+ Sbjct: 330 IVSAHRILVAKVVDIRPY 347 >gi|2183223|gb|AAB60880.1| arginine decarboxylase [Dianthus caryophyllus] Length = 725 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 82/237 (34%), Gaps = 18/237 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD G Y +K N ++ +++ + GSG Sbjct: 116 PVIIRFPDVLKHRLESLQSAFDFAVRTHGYGSHYQGVYPVKCNQDRYIVEDIVEFGSGFR 175 Query: 79 ---DIVSEGELRRALAAPVPAERI-VFSGVGKTIDEIDLALQSG-----IYCFNVESESE 129 + S+ EL A+++ + G E G +E E E Sbjct: 176 FGLEAGSKPELLMAMSSLCKGSPDSLLVCNGFKDAEYISLAIIGRKLGLNTVIVIEQEEE 235 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + +G + + R + H ++G+K + + S Sbjct: 236 VDMAIELSRKMGIRPVVGVRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLESFGM 295 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + + HIGSQI + +L G +++ ID+GGGLGI Y Sbjct: 296 LDCLQLLHFHIGSQIPTTALLSDGVAEASQVYCELTRLGAHMRVIDIGGGLGIDYDG 352 >gi|239834177|ref|ZP_04682505.1| alanine racemase domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239822240|gb|EEQ93809.1| alanine racemase domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 354 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 20/69 (28%), Gaps = 1/69 (1%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIVSE 83 V TP ++ N D + + +K + K G +G+ Sbjct: 10 VDTPAILIDIDRVKANIARVQAHADAIGVKLRPHIKTHKLPFFAKMQVEAGAAGITCQKL 69 Query: 84 GELRRALAA 92 GE A Sbjct: 70 GEAEVMADA 78 >gi|238798629|ref|ZP_04642104.1| Biosynthetic arginine decarboxylase [Yersinia mollaretii ATCC 43969] gi|238717515|gb|EEQ09356.1| Biosynthetic arginine decarboxylase [Yersinia mollaretii ATCC 43969] Length = 659 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 113/310 (36%), Gaps = 33/310 (10%) Query: 16 VSLEKLAH----VVQT--PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L +L P ++ + + AF D + Y +K Sbjct: 70 VDLAQLVKGMQLEQGQRLPALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKV 129 Query: 62 NSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 N ++ VI++L G GL+ S+ E+ LA ++ K + I LAL Sbjct: 130 NQHRRVIESLVSSGEPLGLEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEK 189 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIH 176 V E + + + ++ + R+ + + K ++G ++ KFG+ Sbjct: 190 LGHKVYLVIEKMSEIKMVLEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSAT 249 Query: 177 QIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q+ L + + + H+GSQ+ I + +L G NIQ D Sbjct: 250 QVLQLVDMLREANSLDSLQLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFD 309 Query: 236 VGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVAD 282 VGGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 VGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAH 369 Query: 283 VGILVTKVIS 292 +LV+ VI Sbjct: 370 HTVLVSNVIG 379 >gi|238785650|ref|ZP_04629627.1| Biosynthetic arginine decarboxylase [Yersinia bercovieri ATCC 43970] gi|238713429|gb|EEQ05464.1| Biosynthetic arginine decarboxylase [Yersinia bercovieri ATCC 43970] Length = 659 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 114/310 (36%), Gaps = 33/310 (10%) Query: 16 VSLEKLAH----VVQT--PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L +L P ++ + + AF D + Y +K Sbjct: 70 VDLAQLVKGMQLEQGQRLPALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKV 129 Query: 62 NSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 N ++ VI++L G GL+ S+ E+ LA ++ K + I LAL Sbjct: 130 NQHRRVIESLVSSGEPLGLEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEK 189 Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIH 176 V E + + + ++ + R+ + + K ++G ++ KFG+ Sbjct: 190 LGHKVYLVIEKMSEIKMVLEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSAT 249 Query: 177 QIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 Q+ L ++ + + H+GSQ+ I + +L G NIQ D Sbjct: 250 QVLQLVDMLREANSLESLQLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFD 309 Query: 236 VGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLVAD 282 VGGGLG+ Y ++YA+ + G +I E GR + A Sbjct: 310 VGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAH 369 Query: 283 VGILVTKVIS 292 +LV+ VI Sbjct: 370 HTVLVSNVIG 379 >gi|238763248|ref|ZP_04624213.1| Biosynthetic arginine decarboxylase [Yersinia kristensenii ATCC 33638] gi|238698521|gb|EEP91273.1| Biosynthetic arginine decarboxylase [Yersinia kristensenii ATCC 33638] Length = 581 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 111/292 (38%), Gaps = 27/292 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLG--SG 77 P ++ + + AF D + Y +K N ++ VI++L + G G Sbjct: 10 PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 69 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 L+ S+ E+ LA ++ K + I LAL V E + + Sbjct: 70 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 129 Query: 138 VSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK-I 193 + ++ + R+ + + K ++G ++ KFG+ Q+ L ++ + Sbjct: 130 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLREANSLESL 189 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + H+GSQ+ I + +L G NIQ DVGGGLG+ Y Sbjct: 190 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 249 Query: 254 ------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGILVTKVIS 292 ++YA+ + G +I E GR + A +LV+ VI Sbjct: 250 SVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAHHTVLVSNVIG 301 >gi|171317786|ref|ZP_02906967.1| alanine racemase domain protein [Burkholderia ambifaria MEX-5] gi|171097070|gb|EDT41925.1| alanine racemase domain protein [Burkholderia ambifaria MEX-5] Length = 376 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + N D + +K Q V+ G+ G+ + + E Sbjct: 8 TPAALIDVDRMRNNIARMQAHLDALGVKFRPHVKTTKCQHVVDAQIAAGAQGITVSTLKE 67 Query: 86 LRRALAA 92 + AA Sbjct: 68 AEQFFAA 74 >gi|328675673|gb|AEB28348.1| Biosynthetic arginine decarboxylase [Francisella cf. novicida 3523] Length = 550 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 65/450 (14%), Positives = 124/450 (27%), Gaps = 78/450 (17%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGSG-- 77 P Y ++ N+F+ + Y +K N Q ++K + Sbjct: 53 PLVLYFEHILKNQIDKLYNSFEKAISNLGYTGKYSLAYPIKVNPEQKIVKAIYDYHQHNQ 112 Query: 78 ----LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 ++ ++ EL L+ ++I+ G Q Sbjct: 113 ISLDYEVGTKSELLAVLSTATKTQKIIC--NGFKDLSFYKIAQLAAKIGYKIIIVIENIS 170 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVK 192 + + + + I +K FG+ + QI+ + T K Sbjct: 171 EINIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQK---FGLSLSQINECINFLKTNQLQEK 227 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP-P 251 + + HIGSQ+ + + L + +L+S+ +++ID GGGL + Y RP Sbjct: 228 LVLLHSHIGSQLKSTDKVVANIQRLIKIYSELKSDFIKLKYIDFGGGLAVNYDKYDRPSY 287 Query: 252 SSSDYA-------SLIHQYFGNLQCKIILEPGRFLVA----------------------- 281 YA +Y+ II E GR + A Sbjct: 288 DFDSYAETIVKNCKYYAEYYNCDMPNIITESGRAITAESSLLITKPLIKEHESDVESEIL 347 Query: 282 DVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI----------NYIVNPAG 331 D L +V + + N Sbjct: 348 DQQWLDGEVSLSELQNYLPQNQKNTQQAWLNFSIFQSLPDHWGIDQKFPILPLEFFNNCV 407 Query: 332 DRLHIHADIVGPICETGDFIA------LNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSR 385 DI + D +IA + + GAY + S +N Sbjct: 408 TSEIKLYDI------SCDVDGVVKSTSEYIEIATDNI-EYIVFMCVGAYQGMLSTKHNML 460 Query: 386 LLIPEIMV---NGSQFHI-IRPRMTFQELI 411 I + + + + ++ + L+ Sbjct: 461 GNISAVNIYIDENRKVKVSVKAAENYYSLL 490 >gi|327479540|gb|AEA82850.1| arginine decarboxylase [Pseudomonas stutzeri DSM 4166] Length = 637 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 107/298 (35%), Gaps = 27/298 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPGILQDRVRRLTGAFDANIERMEYAGKYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE+ + Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHKVFIVIEKESEVGLV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L + RV A++ + G++ + + + + I Sbjct: 190 IEEANELKLTPQVGLRVRLSSLASSKWADTGGERSKFGLSAAQLLSVIERFRAAEMDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + + F+ +LR+ + +IDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYRQGFREAIRYYAELRALNLPVDYIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 +YA + G I E GR + A +LV +V +++ D Sbjct: 310 SINYDIDEYAGTVVGMLKEFCEAQGLPHPNIFSESGRAMTAHHAVLVMQVTDVERHND 367 >gi|325001747|ref|ZP_08122859.1| metal-activated pyridoxal enzyme [Pseudonocardia sp. P1] Length = 336 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 3/67 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIVSEGE 85 TP +A+E N + G +KA+ + + G +G + E Sbjct: 8 TPALVVDASALEANLADMAAVLPGPRLRPH--VKAHKTTELSRRQLAHGHAGFTCATVRE 65 Query: 86 LRRALAA 92 + AA Sbjct: 66 VEGMAAA 72 >gi|302753366|ref|XP_002960107.1| hypothetical protein SELMODRAFT_70229 [Selaginella moellendorffii] gi|300171046|gb|EFJ37646.1| hypothetical protein SELMODRAFT_70229 [Selaginella moellendorffii] Length = 613 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 78/237 (32%), Gaps = 18/237 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALKANSNQAVIKTLAHLG---- 75 P + +AF G + Y +K N ++ +++ + G Sbjct: 62 PLIIRFPELLGARLRELQSAFQGAIHALGYNNRFQGVFPVKCNPDKLLVEEIVAAGKPFA 121 Query: 76 SGLDIVSEGELRRALAAPV--PAERIVFSGVGKTIDEIDLA----LQSGIYCFNVESESE 129 GL+ S+ EL ++A + + K + + LA +E E Sbjct: 122 FGLEAGSKPELLLTMSAMCKAHPDAFLICNGYKDAEYVQLALLARSLGMDCIIVLEQLDE 181 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + + LG + I R H + G+ + Sbjct: 182 VDLVIEMSQRLGIEPAIGVRSKLHTKHGGHWGETCGEGGKFGLSAPEIVEVARRLRRQGM 241 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + V H+GSQI + + L +L G ++ +D+GGGLGI Y Sbjct: 242 LDCLELVHFHVGSQIPCLSVVKDSVSEAAFLYCELALMGAGMRILDIGGGLGIDYDG 298 >gi|302804314|ref|XP_002983909.1| hypothetical protein SELMODRAFT_41652 [Selaginella moellendorffii] gi|300148261|gb|EFJ14921.1| hypothetical protein SELMODRAFT_41652 [Selaginella moellendorffii] Length = 613 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 78/237 (32%), Gaps = 18/237 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALKANSNQAVIKTLAHLG---- 75 P + +AF G + Y +K N ++ +++ + G Sbjct: 62 PLIIRFPELLGARLRELQSAFQGAIHALGYNNRFQGVFPVKCNPDKLLVEEIVAAGKPFA 121 Query: 76 SGLDIVSEGELRRALAAPV--PAERIVFSGVGKTIDEIDLA----LQSGIYCFNVESESE 129 GL+ S+ EL ++A + + K + + LA +E E Sbjct: 122 FGLEAGSKPELLLTMSAMCKAHPDAFLICNGYKDAEYVQLALLARSLGMDCIIVLEQLDE 181 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + + LG + I R H + G+ + Sbjct: 182 VDLVIEMSQRLGIEPAIGVRSKLHTKHGGHWGETCGEGGKFGLSAPEIVEVARRLRRQGM 241 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + V H+GSQI + + L +L G ++ +D+GGGLGI Y Sbjct: 242 LDCLELVHFHVGSQIPCLSVVKDSVSEAAFLYCELALMGAGMRILDIGGGLGIDYDG 298 >gi|291557577|emb|CBL34694.1| alanine racemase [Eubacterium siraeum V10Sc8a] Length = 379 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 50/396 (12%), Positives = 99/396 (25%), Gaps = 56/396 (14%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANS----NQAVIKTLAHLGSGLDIVSEGELR 87 A+E NY G D + +KAN+ ++AV L LG VS Sbjct: 12 IDLDALEHNYNEIKKLAKGKD--ILAVVKANAYGHDDKAVCLKLQELGVKYYGVS----- 64 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 +++ +G ++ + + Sbjct: 65 ----------------NLWEGEKLRQHGITGTILTFGYTDEDYFDELLEYGITQTAGSVQ 108 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + A + + G+ I S L + + Sbjct: 109 YAKQLSDYAVSKGVKLPVHIKVNTGMTRVGIDSQQEMLDILAMPGLDCKAAYTHFAAADS 168 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 R + ++ I GI YH D L Y Sbjct: 169 LDPSDVEYTDRQQEKLMKIAKDKGLFIHSQNSGGIIYHGDFGGDIVRAGVILYGHYPNYP 228 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 V V + + + + + + M + P Y + ++ Sbjct: 229 LEVPFDMKSVMTVKSVVSQLKTIPAGTQISYGRTYTAEKEMTVAVIPIGYADGYFRDFSS 288 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNR-KIALPRPGDLLYIE----------------K 370 + ++VG +C D ++ + + GD++Y+ Sbjct: 289 KGKMLINGVLCNVVGRVC--MDQTIVDVSNVPDIKTGDIVYVYSDKCRETSVDYNASLID 346 Query: 371 TGAY---GAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 T Y AV L IP +++ + + Sbjct: 347 TIGYELTCAVA-------LRIPRVIIENGRIKEVVR 375 >gi|227115165|ref|ZP_03828821.1| arginine decarboxylase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 660 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 109/292 (37%), Gaps = 27/292 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLG--SG 77 P ++ + + AF + Y +K N ++ VI++LA+ G G Sbjct: 88 PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147 Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 L+ S+ EL L ++ K + I LAL V E + + Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRLV 207 Query: 138 VSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK-I 193 + ++ + R+ + + K S+G ++ KFG+ Q+ L + + Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAVQVLQLVEMLREAGKLDSL 267 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + H+GSQ+ I + +L G NIQ DVGGGLG+ Y Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327 Query: 254 ------SDYASLIHQ-------YFGNLQCKIILEPGRFLVADVGILVTKVIS 292 ++YA+ + G +I E GR + A +LV+ +I Sbjct: 328 SVNYGLNEYANNVIWGIGDACNEHGLPHPTVITESGRAVTAHHTVLVSNIIG 379 >gi|221633166|ref|YP_002522391.1| Alanine racemase, N-terminal domain family [Thermomicrobium roseum DSM 5159] gi|221156807|gb|ACM05934.1| Alanine racemase, N-terminal domain family [Thermomicrobium roseum DSM 5159] Length = 370 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 8/56 (14%), Positives = 15/56 (26%), Gaps = 1/56 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIV 81 TP +E+N + + LK + + + G G Sbjct: 12 TPCLVVDLDRLERNLAEMAEYARTHGLALRPHLKTHKTAEIARMQQAHGVVGFTCA 67 >gi|220904174|ref|YP_002479486.1| arginine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868473|gb|ACL48808.1| arginine decarboxylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 638 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 109/317 (34%), Gaps = 34/317 (10%) Query: 16 VSLEKLA-----HVVQTPFYCYSTTAIEKNY----LTFSNAFDGMDTMVCY----ALKAN 62 VS+ ++ P ++ +F A + Y +K N Sbjct: 49 VSIPEIISGLRDRGYDMPVLLRVENILDSRIANIHESFRKAIKNLGYTGAYRGVFPIKVN 108 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID----LA 114 Q V++ +A G+ GL++ S+ EL A++ E + K + +D Sbjct: 109 QQQQVVEKIAQFGAQYHHGLEVGSKAELIAAVSLMQDREACIVCNGYKDEEFMDLGLQAL 168 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 F +E SEL L +R+ +LG + I R + A H S G++ P Sbjct: 169 RMGFNVFFVLEMPSELNVLLERSKALGVRPNIGVRAKLAVKAGGHWTDSGGERSTFGLSP 228 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + S + H+GSQ+ I L L G + ++ Sbjct: 229 AQVVDVVDTLKSHDMLDCFKLLHYHLGSQVSNIRDIRTGVMEGARLYVGLIQEGAPMGYL 288 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYF-------------GNLQCKIILEPGRFLVA 281 D+GGGL + Y H SS +L II E GR VA Sbjct: 289 DLGGGLAVDYDGSHTNFISSRNYNLDEYCTDVVETIMSILDEENVPHPHIITESGRATVA 348 Query: 282 DVGILVTKVISIKKSAD 298 +L+ V+ + + Sbjct: 349 YYSVLLFNVLDVSMIEE 365 >gi|284929128|ref|YP_003421650.1| arginine decarboxylase [cyanobacterium UCYN-A] gi|284809587|gb|ADB95292.1| arginine decarboxylase [cyanobacterium UCYN-A] Length = 534 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 93/253 (36%), Gaps = 16/253 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALKANSNQAVIKTLAHLG---- 75 P + IE +N F Y +K N + +++++ + G Sbjct: 61 PLLVHFPDIIEDRIEQLNNCFAKAMVRYSYDGSYQGVFPIKVNQQRHIVESIVNYGYKHK 120 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE--LKTL 133 GL++ S+ EL ALA + ++ K ++ A+ + +N+ E + Sbjct: 121 YGLEVGSKPELLIALAQLKNSNSLLICNGYKDKKYVETAVIAYHLGYNILIVVEQLSEIY 180 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKED-KFGIPIHQIHSLYAYASTLPG-V 191 V L + ++A + + + KFG+ + +I Sbjct: 181 LVADVVLEHGIKPNLGIRAKLSAKGDSRWADSAGDRAKFGLSVTEIICALDQLRKSEMLT 240 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 K+ + HIGSQI I + A + L G +++ DVGGGLGI Y + Sbjct: 241 KLKLLHFHIGSQISAIATIKDALSEASQIYVNLCQLGAPMEYFDVGGGLGIDYDGSNTNF 300 Query: 252 SSSDYASLIHQYF 264 +S S+ + Sbjct: 301 PASKNYSMQNYAN 313 >gi|33340511|gb|AAQ14851.1|AF321137_1 arginine decarboxylase [Nicotiana tabacum] Length = 721 Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 86/241 (35%), Gaps = 18/241 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGS--- 76 P ++ + +AFD G Y +K N ++ V++ + GS Sbjct: 113 PLVVRFPDVLKNRLESLQSAFDLAVHSQGYGAHYQGVYPVKCNQDRFVVEDIVKFGSPFR 172 Query: 77 -GLDIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 GL+ S+ EL A++ E ++ K + I LAL + N E E E Sbjct: 173 FGLEAGSKPELLLAMSCLCKGSAEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 232 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 233 LDLVIDISHKMAVRPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQIVRVVKKLEESGM 292 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI + +L G ++ ID+GGGLGI Y Sbjct: 293 LDCLQLLHFHIGSQIPSTGLLADGVGEAAQIYCELVRLGAGMKFIDIGGGLGIDYDGTKS 352 Query: 250 P 250 Sbjct: 353 C 353 >gi|194014407|ref|ZP_03053024.1| putative alanine racemase [Bacillus pumilus ATCC 7061] gi|194013433|gb|EDW22998.1| putative alanine racemase [Bacillus pumilus ATCC 7061] Length = 369 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 1/68 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 + TP + +N D + K + ++ K +G+ GL + Sbjct: 5 DELDTPALLIDKQVMMENLAAMQQYADRQQVKLRPHTKTHKTPSLAKVQEEMGASGLTVA 64 Query: 82 SEGELRRA 89 GE Sbjct: 65 KVGEAEVM 72 >gi|312958754|ref|ZP_07773274.1| arginine decarboxylase [Pseudomonas fluorescens WH6] gi|311287297|gb|EFQ65858.1| arginine decarboxylase [Pseudomonas fluorescens WH6] Length = 637 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 115/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD Y +K N +AVI+ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIERLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE+ + Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVGLV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A SL K + RV A++ + G+K + + + + I Sbjct: 190 IEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR+ G + HIDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-- 298 DYA I E GR L A +LV +V ++K D Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPNIFSESGRSLTAHHAMLVVQVTDVEKHNDEI 369 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + +I + H +D+ Sbjct: 370 PKIENKESLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDVA 412 >gi|207093374|ref|ZP_03241161.1| carboxynorspermidine decarboxylase [Helicobacter pylori HPKX_438_AG0C1] Length = 159 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 18/62 (29%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGE 85 TP Y + +EKN V ALK + L +G E Sbjct: 8 PTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYE 67 Query: 86 LR 87 + Sbjct: 68 AK 69 >gi|330501723|ref|YP_004378592.1| arginine decarboxylase [Pseudomonas mendocina NK-01] gi|328916010|gb|AEB56841.1| arginine decarboxylase [Pseudomonas mendocina NK-01] Length = 637 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 108/306 (35%), Gaps = 27/306 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD Y +K N +AVI+ + ++ Sbjct: 70 PLLVRFPDILQDRVRRLTGAFDASIERLEYQSRYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE+ + Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L I RV A++ + G+K + + + + I Sbjct: 190 IEEAAELKVAPQIGLRVRLSSLASSKWADTGGEKSKFGLSAAQILSVVERFRAAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI I + K F+ +LR+ G + HIDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANIADYRKGFREAIRYYGELRAMGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA I E GR + A +L+ +V +++ DK Sbjct: 310 SINYDMRDYADAVVDMLKEFCDRQEIPHPHIFSESGRAMTAHHAVLLVQVTDVERHNDKV 369 Query: 301 FVILDV 306 I Sbjct: 370 PEIEPG 375 >gi|148545856|ref|YP_001265958.1| arginine decarboxylase [Pseudomonas putida F1] gi|148509914|gb|ABQ76774.1| arginine decarboxylase [Pseudomonas putida F1] Length = 637 Score = 47.1 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 115/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE+ + Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L K + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVQRFRDAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR+ G + HIDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-- 298 DYA G I E GR L A +LV +V ++K D Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHNDDV 369 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 T + +I + H D+ Sbjct: 370 PTIDNKEALPETVQWLVDLLGPTDIEMVTETYWRATHYMGDVA 412 >gi|167750416|ref|ZP_02422543.1| hypothetical protein EUBSIR_01390 [Eubacterium siraeum DSM 15702] gi|167656567|gb|EDS00697.1| hypothetical protein EUBSIR_01390 [Eubacterium siraeum DSM 15702] Length = 379 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 50/396 (12%), Positives = 99/396 (25%), Gaps = 56/396 (14%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANS----NQAVIKTLAHLGSGLDIVSEGELR 87 A+E NY G D + +KAN+ ++AV L LG VS Sbjct: 12 IDLDALEHNYNEIKKLAKGKD--ILAVVKANAYGHDDKAVCLKLQELGVKYYGVS----- 64 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 +++ +G ++ + + Sbjct: 65 ----------------NLWEGEKLRCHGITGTILTFGYTDEDYFDELLEYGITQTAGSVQ 108 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + A + + G+ I S L + + Sbjct: 109 YAKQLSDYAVSKGVKLPVHIKVNTGMTRVGIDSQQEMLDILAMPGLDCKAAYTHFAAADS 168 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 R + ++ I GI YH D L Y Sbjct: 169 LDPSDVEYTDRQQEKLMKIAKDKGLLIHSQNSGGIIYHGDFGGDIVRAGVILYGHYPNYP 228 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 V V + + + + + + M + P Y + ++ Sbjct: 229 LEVPFDMKSVMTVKSVVSQLKTIPAGTQISYGRTYTAEKEMTVAVIPIGYADGYFRDFSS 288 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNR-KIALPRPGDLLYIE----------------K 370 + ++VG +C D ++ + + GD++Y+ Sbjct: 289 KGKMLINGVLCNVVGRVC--MDQTIVDVSNVPDIKTGDIVYVYSDKCRETSVDYNASLID 346 Query: 371 TGAY---GAVQSGTYNSRLLIPEIMVNGSQFHIIRP 403 T Y AV L IP +++ + + Sbjct: 347 TIGYELTCAVA-------LRIPRVIIENGRIKEVVR 375 >gi|187736146|ref|YP_001878258.1| arginine decarboxylase [Akkermansia muciniphila ATCC BAA-835] gi|187426198|gb|ACD05477.1| arginine decarboxylase [Akkermansia muciniphila ATCC BAA-835] Length = 645 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 54/157 (34%), Gaps = 17/157 (10%) Query: 15 NVSLEKLAH---VVQT--PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 +VSL L T P + +++F Y +K Sbjct: 55 DVSLCDLLEGLKERGTTVPVLFRFRDLLRSRIAELNDSFRKAIKEAGYQGKYQGVYPIKV 114 Query: 62 NSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 N + V++ +A G+ GL+ S+ EL A+A + K + IDLAL + Sbjct: 115 NQQRQVVEEIAEFGTKYDYGLEAGSKPELIAAMAHMHNPNAYLICNGYKDDEFIDLALTA 174 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI 154 N+ E+ + + ++ I + + Sbjct: 175 QKMGLNIFIVLEMPSELDVILERARRMDIRPNLGVRV 211 >gi|116754830|ref|YP_843948.1| arginine decarboxylase [Methanosaeta thermophila PT] gi|116666281|gb|ABK15308.1| arginine decarboxylase [Methanosaeta thermophila PT] Length = 643 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 88/251 (35%), Gaps = 21/251 (8%) Query: 16 VSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 V + + ++T P IE AF G + +K N Sbjct: 41 VDVMDVIRRLETSGENLPVLLRFPQIIEHRIWEIYRAFTGSISEFGYQGKYQPVFPMKVN 100 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID---LAL 115 + VI+ + + G GL+I ++ EL AL +P + ++ K D + + Sbjct: 101 QRKEVIEYILNYGREINIGLEIGTKAELLAALTLDLPEDSLLICNGYKDDDFLRLALMFS 160 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 V+ E+ + + A S+ + + RV + S G+ I Sbjct: 161 DKHKIIIVVDLFEEIFDILRLARSMEVRPLLGMRVKLFSKGSGRWAESGGESAKFGLSTI 220 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 + L ++ + HIGSQI I A + ++R I++ + Sbjct: 221 ECLELLKILEENGLLDRLRMIHFHIGSQITDIHRIKHAMNEAARIYAKVR-KVAEIEYFN 279 Query: 236 VGGGLGIAYHS 246 VGGGL + Y Sbjct: 280 VGGGLSVDYDG 290 >gi|150389494|ref|YP_001319543.1| alanine racemase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149949356|gb|ABR47884.1| alanine racemase domain protein [Alkaliphilus metalliredigens QYMF] Length = 367 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 1/72 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + TP +EKN + +K + ++ ++K G+ G+ Sbjct: 3 IKDLDTPCLVVDLDQLEKNIEEMGVLAKDHGVALWPMVKTHKSEYIVKKQLENGAEGVLA 62 Query: 81 VSEGELRRALAA 92 GE + + A Sbjct: 63 AKLGEAEKMVEA 74 >gi|226942857|ref|YP_002797930.1| arginine decarboxylase [Azotobacter vinelandii DJ] gi|226717784|gb|ACO76955.1| arginine decarboxylase [Azotobacter vinelandii DJ] Length = 636 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 121/319 (37%), Gaps = 38/319 (11%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALK 60 G L +SL P ++ ++AFD Y +K Sbjct: 59 GQLREAGLSL---------PLLVRFPDILQDRVRQLTSAFDANIARLGYQSGYTALYPIK 109 Query: 61 ANSNQAVIKTL---AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 N +AV++++ A++ GL+ S+ EL L A P + K + I LAL Sbjct: 110 VNQQEAVVESIIATANVSIGLEAGSKPELLAVL-ALAPKGGTIVCNGYKDREFIRLALIG 168 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINAN---THKKISTGKKEDKFGIP 174 +V E ++ Q + + + ++ + + + K TG ++ KFG+ Sbjct: 169 QKLGHSVFIVVEKESEVQLIIEEAAELRVVPQLGLRVRLSSLTSSKWADTGGEKAKFGLS 228 Query: 175 IHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 Q+ + + + + H+GSQI + + FK +LR+ G + H Sbjct: 229 AAQLLRVAERLRDAGLEQGVRLLHFHMGSQIANLADYQGGFKEAIRYYAELRALGLPLDH 288 Query: 234 IDVGGGLGIAYHSDH------RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLV 280 +DVGGGLG+ Y H DYA G I E GR L Sbjct: 289 VDVGGGLGVDYDGTHSRNPSSINYDMDDYAATVVGMLQEFCDAQGLPHPHIFSESGRALS 348 Query: 281 ADVGILVTKVISIKKSADK 299 A +LV +V +++ D+ Sbjct: 349 AHHAMLVVQVTDVERHNDQ 367 >gi|325276668|ref|ZP_08142397.1| arginine decarboxylase [Pseudomonas sp. TJI-51] gi|324098195|gb|EGB96312.1| arginine decarboxylase [Pseudomonas sp. TJI-51] Length = 604 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 116/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 37 PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 96 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE+ + Sbjct: 97 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 156 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L K + RV A++ + G+K + + + I Sbjct: 157 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVQRFRDAGLDQGI 216 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR+ G + HIDVGGGLG+ Y H Sbjct: 217 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 276 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK- 299 DYA G I E GR L A +LV +V ++K D+ Sbjct: 277 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHNDQV 336 Query: 300 -TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 T + +I + H D+ Sbjct: 337 PTIENKEALPETVQWLVDLLGPTDIEMVTETYWRATHYMGDVA 379 >gi|217979517|ref|YP_002363664.1| alanine racemase domain protein [Methylocella silvestris BL2] gi|217504893|gb|ACK52302.1| alanine racemase domain protein [Methylocella silvestris BL2] Length = 383 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 9/71 (12%), Positives = 20/71 (28%), Gaps = 1/71 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 + TP + N D + K++ + + + G+ G+ Sbjct: 24 KRLNTPSLILDLDVFDANVARMQAICDANGVNLRPHAKSHKSSRIAQAQREAGAIGVCCA 83 Query: 82 SEGELRRALAA 92 + E A Sbjct: 84 TINEAEAMAVA 94 >gi|294055064|ref|YP_003548722.1| arginine decarboxylase [Coraliomargarita akajimensis DSM 45221] gi|293614397|gb|ADE54552.1| arginine decarboxylase [Coraliomargarita akajimensis DSM 45221] Length = 641 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 101/288 (35%), Gaps = 29/288 (10%) Query: 35 TAIEKNY----LTFSNAFDGMDTMVCY----ALKANSNQAVIKTLAHLG----SGLDIVS 82 + F+ A G Y +K N + V++ + G GL+ S Sbjct: 74 DMLRTRVVQLNELFAEAIAGEGYQGQYRGVFPIKVNQLREVVEEIREAGKPYHYGLECGS 133 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI----YCFNVESESELKTLNQRAV 138 + EL ALA + ++ K + I +AL VE SE+ + Q + Sbjct: 134 KPELMIALAMHKDPKALIICNGYKDDEFIRMALYGRRLGKEIYLVVEQLSEVPRIIQISK 193 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 LG I FR+ + S+G+ + + + + Sbjct: 194 KLGIDPLIGFRIKLSTSGEGKWASSSGEDAKFGLTSPEIVDAARRLKRAGLEHCLKLIHF 253 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS-SSDYA 257 H+GSQ+ I++ KA +L G ++ +DVGGGLGI Y S +Y Sbjct: 254 HVGSQVPNIQTIKKAVVEATRFYCELSKMGFDMSLLDVGGGLGIDYDGSRSNYESSMNYT 313 Query: 258 SLIHQYFGNLQCKIIL------------EPGRFLVADVGILVTKVISI 293 + K I E GR +VA ILVT+V Sbjct: 314 LREYTRDVVYNIKSICEDAGVPVPDIVSESGRAIVAPHSILVTEVCDR 361 >gi|167031628|ref|YP_001666859.1| arginine decarboxylase [Pseudomonas putida GB-1] gi|166858116|gb|ABY96523.1| arginine decarboxylase [Pseudomonas putida GB-1] Length = 637 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 115/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE+ + Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L K + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVQRFRDAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR+ G + HIDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-- 298 DYA G I E GR L A +LV +V ++K D Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHNDDV 369 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 T + +I + H D+ Sbjct: 370 PTIENKEALPETVQWLVDLLGPTDIEMVTETYWRATHYMGDVA 412 >gi|26987305|ref|NP_742730.1| arginine decarboxylase [Pseudomonas putida KT2440] gi|46397731|sp|Q88QC7|SPEA_PSEPK RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|24981952|gb|AAN66194.1|AE016247_4 biosynthetic arginine decarboxylase [Pseudomonas putida KT2440] gi|313496941|gb|ADR58307.1| SpeA [Pseudomonas putida BIRD-1] Length = 637 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 115/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE+ + Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L K + RV A++ + G+K + + + I Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVQRFRDAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR+ G + HIDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-- 298 DYA G I E GR L A +LV +V ++K D Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHNDDV 369 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 T + +I + H D+ Sbjct: 370 PTIENKEALPETVQWLVDLLGPTDIEMVTETYWRATHYMGDVA 412 >gi|302339741|ref|YP_003804947.1| arginine decarboxylase [Spirochaeta smaragdinae DSM 11293] gi|301636926|gb|ADK82353.1| arginine decarboxylase [Spirochaeta smaragdinae DSM 11293] Length = 639 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 85/257 (33%), Gaps = 21/257 (8%) Query: 16 VSLEKL-----AHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 VSL + A P + + T + +F + +K N Sbjct: 50 VSLLDIIDGIEARGYGLPVLLRFPDILGERIRTLNESFAKTMKQYEYRGAYRGVFPIKVN 109 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 Q VI+ + G GL+ S+ EL AL E + K + +DLAL Sbjct: 110 QQQQVIEEVVRFGGAYHHGLEAGSKPELLIALGMVRDPETPIICNGYKDEEFVDLALYGV 169 Query: 119 IYCFN----VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E E+ T+ +R+ LG + + RV S G Sbjct: 170 KMGLQVILVIEQPGEISTIIRRSKKLGIEPTLGLRVKLSSTVGGKWAESAGDHSVFGLTA 229 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + ++ + + + H+GSQI I A L G + ++ Sbjct: 230 GQLVDAIEELSRADMLGTLRLLHYHLGSQIPNIRDIRSAVHEASRYYTALVHEGAPMGYL 289 Query: 235 DVGGGLGIAYHSDHRPP 251 D+GGGLG+ Y Sbjct: 290 DIGGGLGVDYDGSRTTF 306 >gi|253699938|ref|YP_003021127.1| arginine decarboxylase [Geobacter sp. M21] gi|259511346|sp|C6E3V4|SPEA_GEOSM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|251774788|gb|ACT17369.1| arginine decarboxylase [Geobacter sp. M21] Length = 635 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 63/305 (20%), Positives = 120/305 (39%), Gaps = 30/305 (9%) Query: 16 VSLEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQA 66 V ++ L ++ P +E + S F Y +K N + Sbjct: 47 VLVDDLIKRKIKPPILLRFMNILEGRIASISRVFKNAISDNNYPAKYQTFYPIKVNQQRQ 106 Query: 67 VIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 V++ +A+ G GL++ S+ EL A++ + K + I+ L + + Sbjct: 107 VVEAIANFGKKYNIGLEVGSKPELVAAISMSTGNNLPILCNGYKDTEFIETVLFATRVGY 166 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIH 179 ++ E ++ V + K+ I ++ + + K ++G + KFG+ I ++ Sbjct: 167 DITIVVEKLFELEKIVEVSKRTGIVPKLGIRVKLSSKGIGKWSTSGGDDAKFGLRISELI 226 Query: 180 SLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + + + + H+GSQI +I+ A + ++R G N++ +D+GG Sbjct: 227 AAIEMLKQNDMLDSVKLLHFHVGSQITKIDKIKNALIEGTRIYAEMRKLGVNLEFLDIGG 286 Query: 239 GLGIAYH------SDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGI 285 GLG+ Y S +YA+ + N II E GR VA + Sbjct: 287 GLGVDYDGSKSSYFSSVNYSLEEYANDVIYQVKNICDDAGVPCPNIISESGRATVAHYSV 346 Query: 286 LVTKV 290 LVT V Sbjct: 347 LVTDV 351 >gi|254517892|ref|ZP_05129948.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226911641|gb|EEH96842.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 387 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 23/82 (28%), Gaps = 10/82 (12%) Query: 10 SLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA-NSNQAVI 68 LH E V + Y + +N + D + + K N + Sbjct: 19 KLHKEGVIIPD--------TYVIDLDTLIENAKKLKDEADKYGIKLYFMTKQIGRNPLIC 70 Query: 69 KTLAHLG-SGLDIVSEGELRRA 89 K LG G +V E Sbjct: 71 KEFMKLGYDGAVVVDFKEAEVM 92 >gi|241864906|gb|ACS68536.1| low-specificity threonine aldolase [uncultured bacterium FLS18] Length = 407 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 5/80 (6%) Query: 13 AENVSLEK-LA-HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 A+ + L + LA + TP ++ N ++ G + + K + + K Sbjct: 34 ADAIPLARPLAIDELSTPALLIDLDRMDGNLRKMADHARGKNVGLRPHTKTHKCPIIAKM 93 Query: 71 LAHLGS-GLDI--VSEGELR 87 LG+ G+ VSE E+ Sbjct: 94 QIDLGAVGVCAAKVSEAEVM 113 >gi|229588174|ref|YP_002870293.1| arginine decarboxylase [Pseudomonas fluorescens SBW25] gi|229360040|emb|CAY46894.1| biosynthetic arginine decarboxylase [Pseudomonas fluorescens SBW25] Length = 637 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 116/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD Y +K N +AVI+ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIERLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE++ + Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A SL K + RV A++ + G+K + + + + I Sbjct: 190 IEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR+ G + HIDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-- 298 DYA I E GR L A +LV +V ++K D Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPNIFSESGRSLTAHHAMLVVQVTDVEKHNDEI 369 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + +I + H +D+ Sbjct: 370 PVIENKESLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDVA 412 >gi|170723759|ref|YP_001751447.1| arginine decarboxylase [Pseudomonas putida W619] gi|169761762|gb|ACA75078.1| arginine decarboxylase [Pseudomonas putida W619] Length = 637 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 73/343 (21%), Positives = 115/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE+ + Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L K + RV A++ + G+K I + + I Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLISVVQRFRDAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR+ G + HIDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD-- 298 DYA G I E GR L A +LV +V ++K D Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHNDDV 369 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 T + +I + H D+ Sbjct: 370 PTIENKESLPETVQWLADLLGPTDIEMVTETYWRATHYMGDVA 412 >gi|83950233|ref|ZP_00958966.1| threonine aldolase, low-specificity [Roseovarius nubinhibens ISM] gi|83838132|gb|EAP77428.1| threonine aldolase, low-specificity [Roseovarius nubinhibens ISM] Length = 387 Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V K LG G+ Sbjct: 25 ADIQTPCLVLDLDALERNIKKMGDYAKSHGMRHRVHGKMHKSVDVAKLQHELGGAVGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|292622393|ref|XP_700533.4| PREDICTED: platelet endothelial aggregation receptor 1 [Danio rerio] Length = 1020 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 21/267 (7%), Positives = 45/267 (16%) Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 E R E + V + ++ + + + + + Sbjct: 91 CCPGFYESRNKCVPRCTKECVHGRCVAPDRCQCEMGWRGDDCSSSCDGQHWGPGCRRLCE 150 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 N A + K+ + V Sbjct: 151 CQNGGECDVLTGNCQCPAGYTGQHCHDPCPVKWFGQGCRQECQCGTGGICNQTTGECVCK 210 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + ES + + Q G ++ PP Sbjct: 211 QGFTGTLCEESCPRPKRCAARCPCQNGGICQGNGVCLCPPGWMGPVCTERCPPGRFGINC 270 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 N + A + + + N ++ Sbjct: 271 SKDCLCHNGGHCDQEKGQCQCDAGYTGERCNEECPVGTYGEDCKGVCDCANGARCYNIHG 330 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPIC 345 P D + G C Sbjct: 331 GCLCEPGFKGPRCDHRMCPEAVFGMHC 357 >gi|293361185|ref|XP_001078620.2| PREDICTED: MEGF11 protein [Rattus norvegicus] Length = 1319 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 27/264 (10%), Positives = 45/264 (17%), Gaps = 10/264 (3%) Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E G + G +C N N + Sbjct: 226 ECMHGRCVSPDTCHCEPGWGGPDCSSGCDSEHWGPHCSNRCQCQNGALCNPITGACVCAP 285 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV-DMHIGSQ 203 + A G + A G + + + Sbjct: 286 GFRGWRCEEFCAPGT---------HGKGCQLLCQCHHGASCDPRTGECLCAPGYTGVYCE 336 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 H A LR Q + H G A + PP + Sbjct: 337 ELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCP 396 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + + A + + N A Sbjct: 397 CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGTFGFRCSQRCDCHNGGQCSPATGACECE 456 Query: 324 NYIVNPAGDRLHIHADIVGPICET 347 P+ + GP C + Sbjct: 457 PGYKGPSCQERLCPEGLHGPGCTS 480 >gi|197119288|ref|YP_002139715.1| arginine decarboxylase [Geobacter bemidjiensis Bem] gi|226732566|sp|B5EIW4|SPEA_GEOBB RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|197088648|gb|ACH39919.1| biosynthetic arginine decarboxylase [Geobacter bemidjiensis Bem] Length = 635 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 63/305 (20%), Positives = 120/305 (39%), Gaps = 30/305 (9%) Query: 16 VSLEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQA 66 V ++ L ++ P +E + S F Y +K N + Sbjct: 47 VLVDDLIKRKIKPPILLRFMNILEGRIASISRVFKNAISDNNYPAKYQTFYPIKVNQQRQ 106 Query: 67 VIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 V++ +A+ G GL++ S+ EL A++ + K + I+ L + + Sbjct: 107 VVEAIANFGKKYNIGLEVGSKPELVAAISMSTGNNLPILCNGYKDTEFIETVLFATRVGY 166 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIH 179 ++ E ++ V + K+ I ++ + + K ++G + KFG+ I ++ Sbjct: 167 DITIVVEKLFELEKIVEVSKRTGIVPKLGIRVKLSSKGIGKWSTSGGDDAKFGLRISELI 226 Query: 180 SLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + + + + H+GSQI +I+ A + ++R G N++ +D+GG Sbjct: 227 AAIDMLKQNDMLDSVKLLHFHVGSQITKIDKIKNALIEGTRIYAEMRKLGVNLEFLDIGG 286 Query: 239 GLGIAYH------SDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGI 285 GLG+ Y S +YA+ + N II E GR VA + Sbjct: 287 GLGVDYDGSKSSYFSSVNYSLEEYANDVIYQVKNICDDAGVPCPNIISESGRATVAHYSV 346 Query: 286 LVTKV 290 LVT V Sbjct: 347 LVTDV 351 >gi|104783785|ref|YP_610283.1| arginine decarboxylase [Pseudomonas entomophila L48] gi|95112772|emb|CAK17500.1| arginine decarboxylase, PLP-binding, biosynthetic [Pseudomonas entomophila L48] Length = 637 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 107/301 (35%), Gaps = 27/301 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD + Y +K N +AV++ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE+ + Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A L K + RV A++ + G+K I + + I Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLISVVQRFRDAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR+ G + HIDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA G I E GR L A +LV +V ++ D+ Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVESHNDEM 369 Query: 301 F 301 Sbjct: 370 P 370 >gi|306845963|ref|ZP_07478530.1| metal-activated pyridoxal protein [Brucella sp. BO1] gi|306273598|gb|EFM55443.1| metal-activated pyridoxal protein [Brucella sp. BO1] Length = 355 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 35/135 (25%), Gaps = 2/135 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP + N D + +K + + G+ G+ Sbjct: 10 EVDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQK 69 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 GE A + + + + L +V ++E + + Sbjct: 70 LGEAEVMADAGLT-DIFLPYNILGQEKLDRLHALHRRITISVTVDNETSLAGLAQHFMNE 128 Query: 143 KAPIAFRVNPDINAN 157 K P+ V D Sbjct: 129 KRPLKVLVECDTGMG 143 >gi|328957818|ref|YP_004375204.1| hypothetical protein CAR_c15290 [Carnobacterium sp. 17-4] gi|328674142|gb|AEB30188.1| conserved hypothetical protein [Carnobacterium sp. 17-4] Length = 385 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 41/127 (32%), Gaps = 1/127 (0%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA-NSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y I +N D + + LK N + K L LG +V + + Sbjct: 31 YVLDLDIIRENAKKLIETAKKNDIELFFMLKQIGRNPTIAKMLVELGIKNAVVVDFREAK 90 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V V + + G V S +L+ +N A +G K I Sbjct: 91 IMMENNIPLGNVGHLVQIPQMLLKDIMMYGSKYLTVYSLEKLQAINGLAKEIGIKQKILL 150 Query: 149 RVNPDIN 155 RV D + Sbjct: 151 RVVSDED 157 >gi|7230371|gb|AAF42970.1|AF127239_1 arginine decarboxylase 1 [Nicotiana tabacum] gi|7230373|gb|AAF42971.1|AF127240_1 arginine decarboxylase 1 [Nicotiana tabacum] Length = 720 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 94/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGS--- 76 P ++ + +AFD G Y +K N ++ V++ + GS Sbjct: 112 PLVVRFPDVLKNRLESLQSAFDLAVHSQGYGAHYQGVYPVKCNQDRFVVEDIVKFGSSFR 171 Query: 77 -GLDIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 GL+ S+ EL A++ E ++ K + I LAL + N E E E Sbjct: 172 FGLEAGSKPELLLAMSCLCRGSAEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 231 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 232 LDLVIDISRKMAVRPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQIVRVVKKLEESGM 291 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI + +L G ++ ID GGGLGI Y Sbjct: 292 LDCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELIRLGAGMKFIDTGGGLGIDYDGTKS 351 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S I +Y + + R V I Sbjct: 352 CDSDVSVGYGIQEYASTVVQAVQYVCDRKGVKHPVIC 388 >gi|222054775|ref|YP_002537137.1| arginine decarboxylase [Geobacter sp. FRC-32] gi|254772919|sp|B9M6H6|SPEA_GEOSF RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|221564064|gb|ACM20036.1| arginine decarboxylase [Geobacter sp. FRC-32] Length = 635 Score = 46.7 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 65/305 (21%), Positives = 121/305 (39%), Gaps = 30/305 (9%) Query: 16 VSLEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQA 66 V ++ L ++ P ++ + + AF + +K N + Sbjct: 47 VLVDDLIKRKIKPPILLRFMDVLQGRIASINRAFKSAISENDYPAKYQTFFPIKVNQQRQ 106 Query: 67 VIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 V++ +A G GL++ S+ EL ++ + K + I+ L + + Sbjct: 107 VVEAIASYGKRYNIGLEVGSKPELVAGISISSGNNLPIICNGYKDSEYIETVLYATAIGY 166 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIH 179 ++ E ++ + L KK I R+ + + T K ++G ++ KFG+ + +I Sbjct: 167 DITLVIEKLFELEKVIELVKKTGIQPRLGIRVKLSSKGTGKWATSGGEDAKFGLRMSEII 226 Query: 180 SLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + ++ + HIGSQI +I+ A + +LR G I+ +D+GG Sbjct: 227 AAIDLLEENGLLDRVKLIHFHIGSQITKIDKIKTALIEGARVYTELRKMGMGIEFVDIGG 286 Query: 239 GLGIAYH------SDHRPPSSSDYASLIHQYFGNL-------QCKIILEPGRFLVADVGI 285 GLG+ Y S +YA+ + N+ II E GR VA + Sbjct: 287 GLGVDYDGSKSSYFSSVNYSVEEYANDVIYQIKNICDDAGVECPNIISESGRATVAHYSV 346 Query: 286 LVTKV 290 LVT V Sbjct: 347 LVTNV 351 >gi|304317133|ref|YP_003852278.1| alanine racemase domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778635|gb|ADL69194.1| alanine racemase domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 393 Score = 46.4 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 90/367 (24%), Gaps = 33/367 (8%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLGS-GLDIVSEGELR 87 Y +I +N A + + ++ Y K N V K + G V E + Sbjct: 31 YVLDLDSIYENAKLLKEAANKNNIILYYMTKQFGRNPIVAKIIEEAGIEKAVAVDIDEAK 90 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + + V ++I +L+ S + L+ A LG + I Sbjct: 91 ILYKNGLK-IGHIGHLVQIPKNDIMASLKMHPDVITCFSYDKAAELSDIAEKLGIRQNIL 149 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 RV D + GI + + + + L + I G+ D Sbjct: 150 LRVIDDKD--------DIYPGQYGGIKLKDLRKIASNILRLKNIDIVGITSFPCFLYDYN 201 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 KA L + ++ G + S + Sbjct: 202 SRKIKATHNAETLLRAKNILSEMGINVLQVNGPSVTCCSSMPILKKYGITHGEPGHALTG 261 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 I + V I + + I+ I+ Sbjct: 262 TTPIHAYNNN---QPEKPALVYVSEISHISGNKAYCFGGGFYARSKMKHALVSGNIDDIL 318 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIA--LPRPGDLLYIEKTGAYGAVQSGT-YNS 384 D + A E+ D+ + GD + + + Sbjct: 319 EKRYDVEELPA-------ESIDYYGT-ILLNGGKVNVGDTVI--------YSFRTQIFIT 362 Query: 385 RLLIPEI 391 R + + Sbjct: 363 RAKVAIV 369 >gi|163795243|ref|ZP_02189211.1| urocanate hydratase [alpha proteobacterium BAL199] gi|159179641|gb|EDP64170.1| urocanate hydratase [alpha proteobacterium BAL199] Length = 378 Score = 46.4 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 1/70 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 + TP A E+N + V K + + AV + G+ G Sbjct: 14 DAIDTPALVIDLDAFERNLDRMAAFSHDTGIRVRPHAKTHKSPAVARQQMQRGAVGQCCQ 73 Query: 82 SEGELRRALA 91 GE + Sbjct: 74 KVGEAEVLVH 83 >gi|153011211|ref|YP_001372425.1| alanine racemase domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151563099|gb|ABS16596.1| alanine racemase domain protein [Ochrobactrum anthropi ATCC 49188] Length = 354 Score = 46.4 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 1/72 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 H V TP ++ N D + + +K + K G+ G+ Sbjct: 7 VHEVDTPAILIDIDRVKANIAKAQAHADAVGVKLRPHIKTHKLPLFAKMQVEAGATGITC 66 Query: 81 VSEGELRRALAA 92 GE A Sbjct: 67 QKLGEAEVMADA 78 >gi|94265402|ref|ZP_01289155.1| Arginine decarboxylase [delta proteobacterium MLMS-1] gi|93454104|gb|EAT04436.1| Arginine decarboxylase [delta proteobacterium MLMS-1] Length = 642 Score = 46.4 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 83/246 (33%), Gaps = 26/246 (10%) Query: 28 PFYCYSTTAIEKNYLT-------------FSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 P + + N F G+ Y +K N + V++ + Sbjct: 65 PMLIRFQDLLRNRVERINRAFAEAIAEAEYQNRFSGV-----YPVKVNQLREVVEEVIEA 119 Query: 75 G----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIYCFNVES 126 G GL++ S+ EL ALA ++ K D I +A VE Sbjct: 120 GRPFHHGLEVGSKPELHAALALHEDPRSLIVCNGYKDRDYIRMALLGRKLDKKVILVVER 179 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E++ + + I FRV + S G+ + + + + Sbjct: 180 VEEVERIIAEVDKMQVVPLIGFRVRLMSGGKGKWEKSGGENAKFGLSSMDIMRASHLLKE 239 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + V HIGSQ+ + KA + +L GH ++++DVGGGLG+ Y Sbjct: 240 AGLAANLKLVHFHIGSQVPDALTIKKAVREGAMFYAKLAKMGHGLEYLDVGGGLGVDYDG 299 Query: 247 DHRPPS 252 Sbjct: 300 SRTTFH 305 >gi|94269477|ref|ZP_01291472.1| Arginine decarboxylase [delta proteobacterium MLMS-1] gi|93451200|gb|EAT02109.1| Arginine decarboxylase [delta proteobacterium MLMS-1] Length = 642 Score = 46.4 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 83/246 (33%), Gaps = 26/246 (10%) Query: 28 PFYCYSTTAIEKNYLT-------------FSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 P + + N F G+ Y +K N + V++ + Sbjct: 65 PMLIRFQDLLRNRVERINRAFAEAIAEAEYQNRFSGV-----YPVKVNQLREVVEEVIEA 119 Query: 75 G----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIYCFNVES 126 G GL++ S+ EL ALA ++ K D I +A VE Sbjct: 120 GRPFHHGLEVGSKPELHAALALHEDPRSLIVCNGYKDRDYIRMALLGRKLDKKVILVVER 179 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 E++ + + I FRV + S G+ + + + + Sbjct: 180 VEEVERIIAEVDKMQVVPLIGFRVRLMSGGKGKWEKSGGENAKFGLSSMDIMRASHLLKE 239 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + V HIGSQ+ + KA + +L GH ++++DVGGGLG+ Y Sbjct: 240 AGLAANLKLVHFHIGSQVPDALTIKKAVREGAMFYAKLAKMGHGLEYLDVGGGLGVDYDG 299 Query: 247 DHRPPS 252 Sbjct: 300 SRTTFH 305 >gi|330807331|ref|YP_004351793.1| arginine decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375439|gb|AEA66789.1| Arginine decarboxylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 637 Score = 46.4 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 116/343 (33%), Gaps = 29/343 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTL---AHLGS 76 P ++ + AFD Y +K N +AVI+ + ++ Sbjct: 70 PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS---GIYCFNVESESELKTL 133 GL+ S+ EL LA IV +G + +E ESE+ + Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVGLV 189 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + A +L K + RV A++ + G+K + + + + I Sbjct: 190 IEEAATLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH----- 248 + H+GSQI + + FK +LR+ G + HIDVGGGLG+ Y H Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309 Query: 249 -RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 DYA I E GR L A +LV +V ++K D Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPNIFSESGRSLTAHHAMLVVQVTDVEKHNDDV 369 Query: 301 FVILDVA--MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 I + +I + H +D+ Sbjct: 370 PAIDNKQELPETVQWLVDLLGPTDIEMVTETYWRATHYMSDVA 412 >gi|319794305|ref|YP_004155945.1| alanine racemase domain protein [Variovorax paradoxus EPS] gi|315596768|gb|ADU37834.1| alanine racemase domain protein [Variovorax paradoxus EPS] Length = 380 Score = 46.4 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 1/64 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP A+ +N + + +K + + + + G+ G+ V+ GE Sbjct: 23 TPALLIDLPAMTRNIERMAAFAKARGIGLRPHVKTHKSIEIARRQVAAGAIGVSCVTVGE 82 Query: 86 LRRA 89 Sbjct: 83 AEIM 86 >gi|83772085|dbj|BAE62215.1| unnamed protein product [Aspergillus oryzae] Length = 128 Score = 46.4 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 7/47 (14%) Query: 340 IVGPICETGDFIALNRKIA-LPRPGDLLYIEKTGAYGAVQSGTYNSR 385 I GP C+ D++ + + D L + GA +N Sbjct: 3 IWGPTCDGCDYVVRGATLRCEAKVRDWLVYKNMGA------TRFNGF 43 >gi|306841724|ref|ZP_07474411.1| metal-activated pyridoxal protein [Brucella sp. BO2] gi|306288254|gb|EFM59638.1| metal-activated pyridoxal protein [Brucella sp. BO2] Length = 355 Score = 46.4 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 18/70 (25%), Gaps = 1/70 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP + N D + +K + + G+ G+ Sbjct: 10 EVDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQK 69 Query: 83 EGELRRALAA 92 GE A Sbjct: 70 LGEAEVMADA 79 >gi|322420301|ref|YP_004199524.1| arginine decarboxylase [Geobacter sp. M18] gi|320126688|gb|ADW14248.1| arginine decarboxylase [Geobacter sp. M18] Length = 635 Score = 46.4 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 64/305 (20%), Positives = 122/305 (40%), Gaps = 30/305 (9%) Query: 16 VSLEKLAH-VVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQA 66 V ++ L ++ P +E + S F Y +K N + Sbjct: 47 VLVDDLIKRKIKPPILLRFMNILEGRIASISRVFKNAIHDNNYPAKYQTFYPIKVNQQRQ 106 Query: 67 VIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 V++ +A+ G GL++ S+ EL A++ + + K + I+ L + + Sbjct: 107 VVEAIANFGKKYNIGLEVGSKPELVAAISMVTGSNIPIICNGYKDTEFIETVLFATRVGY 166 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQIH 179 ++ E ++ V + K+ I ++ + + K ++G ++ KFG+ I +I Sbjct: 167 DITIVVEKLFELEKIVEVSKRTGIVPKLGVRVKLSSKGIGKWSTSGGEDAKFGLRISEII 226 Query: 180 SLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + + + + H+GSQI +I+ A + ++R G N++ +D+GG Sbjct: 227 AAIGMLKENDMLDCVKLLHFHVGSQITKIDKIKNALIEGTRIYAEMRKLGVNLEFLDIGG 286 Query: 239 GLGIAYH------SDHRPPSSSDYASLIHQYFGN-------LQCKIILEPGRFLVADVGI 285 GLG+ Y S +YA+ + N II E GR VA + Sbjct: 287 GLGVDYDGSKSSYFSSVNYSLDEYANDVIYQVKNICDDAGVPCPNIISESGRATVAHYSV 346 Query: 286 LVTKV 290 LVT V Sbjct: 347 LVTDV 351 >gi|254705776|ref|ZP_05167604.1| metal-activated pyridoxal protein [Brucella pinnipedialis M163/99/10] gi|261313198|ref|ZP_05952395.1| alanine racemase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261302224|gb|EEY05721.1| alanine racemase domain-containing protein [Brucella pinnipedialis M163/99/10] Length = 355 Score = 46.4 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 18/70 (25%), Gaps = 1/70 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP + N D + +K + + G+ G+ Sbjct: 10 EVDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQK 69 Query: 83 EGELRRALAA 92 GE A Sbjct: 70 LGEAEVMADA 79 >gi|254699959|ref|ZP_05161787.1| metal-activated pyridoxal protein [Brucella suis bv. 5 str. 513] gi|261750439|ref|ZP_05994148.1| alanine racemase domain-containing protein [Brucella suis bv. 5 str. 513] gi|261740192|gb|EEY28118.1| alanine racemase domain-containing protein [Brucella suis bv. 5 str. 513] Length = 355 Score = 46.4 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 18/70 (25%), Gaps = 1/70 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP + N D + +K + + G+ G+ Sbjct: 10 EVDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQK 69 Query: 83 EGELRRALAA 92 GE A Sbjct: 70 LGEAEVMADA 79 >gi|161620802|ref|YP_001594688.1| alanine racemase [Brucella canis ATCC 23365] gi|161337613|gb|ABX63917.1| Alanine racemase [Brucella canis ATCC 23365] Length = 355 Score = 46.4 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 18/70 (25%), Gaps = 1/70 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP + N D + +K + + G+ G+ Sbjct: 10 EVDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQK 69 Query: 83 EGELRRALAA 92 GE A Sbjct: 70 LGEAEVMADA 79 >gi|23500480|ref|NP_699920.1| amino acid processing-like protein [Brucella suis 1330] gi|148557939|ref|YP_001257694.1| amino acid processing-like protein [Brucella ovis ATCC 25840] gi|163844874|ref|YP_001622529.1| hypothetical protein BSUIS_B0735 [Brucella suis ATCC 23445] gi|254703081|ref|ZP_05164909.1| metal-activated pyridoxal protein [Brucella suis bv. 3 str. 686] gi|254711007|ref|ZP_05172818.1| metal-activated pyridoxal protein [Brucella pinnipedialis B2/94] gi|256015507|ref|YP_003105516.1| amino acid processing enzyme-related protein [Brucella microti CCM 4915] gi|256029389|ref|ZP_05443003.1| metal-activated pyridoxal protein [Brucella pinnipedialis M292/94/1] gi|256043620|ref|ZP_05446547.1| metal-activated pyridoxal protein [Brucella melitensis bv. 1 str. Rev.1] gi|256059078|ref|ZP_05449287.1| metal-activated pyridoxal protein [Brucella neotomae 5K33] gi|256111342|ref|ZP_05452368.1| metal-activated pyridoxal protein [Brucella melitensis bv. 3 str. Ether] gi|256157582|ref|ZP_05455500.1| metal-activated pyridoxal protein [Brucella ceti M490/95/1] gi|256253443|ref|ZP_05458979.1| metal-activated pyridoxal protein [Brucella ceti B1/94] gi|260167522|ref|ZP_05754333.1| metal-activated pyridoxal protein [Brucella sp. F5/99] gi|260564811|ref|ZP_05835296.1| alanine racemase domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|260567990|ref|ZP_05838459.1| alanine racemase domain-containing protein [Brucella suis bv. 4 str. 40] gi|261220568|ref|ZP_05934849.1| alanine racemase domain-containing protein [Brucella ceti B1/94] gi|261318591|ref|ZP_05957788.1| alanine racemase domain-containing protein [Brucella pinnipedialis B2/94] gi|261323024|ref|ZP_05962221.1| alanine racemase domain-containing protein [Brucella neotomae 5K33] gi|261753697|ref|ZP_05997406.1| alanine racemase domain-containing protein [Brucella suis bv. 3 str. 686] gi|261756939|ref|ZP_06000648.1| alanine racemase domain-containing protein [Brucella sp. F5/99] gi|265986391|ref|ZP_06098948.1| alanine racemase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|265990040|ref|ZP_06102597.1| alanine racemase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265992849|ref|ZP_06105406.1| alanine racemase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|265996085|ref|ZP_06108642.1| alanine racemase domain-containing protein [Brucella ceti M490/95/1] gi|294853480|ref|ZP_06794152.1| metal-activated pyridoxal protein [Brucella sp. NVSL 07-0026] gi|23464109|gb|AAN33925.1| amino acid processing enzyme-related protein [Brucella suis 1330] gi|148369224|gb|ABQ62096.1| amino acid processing enzyme-related protein [Brucella ovis ATCC 25840] gi|163675597|gb|ABY39707.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|255998167|gb|ACU49854.1| amino acid processing enzyme-related protein [Brucella microti CCM 4915] gi|260152454|gb|EEW87547.1| alanine racemase domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|260154655|gb|EEW89736.1| alanine racemase domain-containing protein [Brucella suis bv. 4 str. 40] gi|260919152|gb|EEX85805.1| alanine racemase domain-containing protein [Brucella ceti B1/94] gi|261297814|gb|EEY01311.1| alanine racemase domain-containing protein [Brucella pinnipedialis B2/94] gi|261299004|gb|EEY02501.1| alanine racemase domain-containing protein [Brucella neotomae 5K33] gi|261736923|gb|EEY24919.1| alanine racemase domain-containing protein [Brucella sp. F5/99] gi|261743450|gb|EEY31376.1| alanine racemase domain-containing protein [Brucella suis bv. 3 str. 686] gi|262550382|gb|EEZ06543.1| alanine racemase domain-containing protein [Brucella ceti M490/95/1] gi|262763719|gb|EEZ09751.1| alanine racemase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263000709|gb|EEZ13399.1| alanine racemase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|264658588|gb|EEZ28849.1| alanine racemase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|294819135|gb|EFG36135.1| metal-activated pyridoxal protein [Brucella sp. NVSL 07-0026] Length = 355 Score = 46.4 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 18/70 (25%), Gaps = 1/70 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP + N D + +K + + G+ G+ Sbjct: 10 EVDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQK 69 Query: 83 EGELRRALAA 92 GE A Sbjct: 70 LGEAEVMADA 79 >gi|17988891|ref|NP_541524.1| metal-activated pyridoxal protein [Brucella melitensis bv. 1 str. 16M] gi|225629220|ref|ZP_03787253.1| metal-activated pyridoxal protein [Brucella ceti str. Cudo] gi|17984718|gb|AAL53788.1| metal-activated pyridoxal enzyme [Brucella melitensis bv. 1 str. 16M] gi|225615716|gb|EEH12765.1| metal-activated pyridoxal protein [Brucella ceti str. Cudo] Length = 360 Score = 46.4 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 18/70 (25%), Gaps = 1/70 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP + N D + +K + + G+ G+ Sbjct: 15 EVDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQK 74 Query: 83 EGELRRALAA 92 GE A Sbjct: 75 LGEAEVMADA 84 >gi|87311059|ref|ZP_01093183.1| hypothetical protein DSM3645_18606 [Blastopirellula marina DSM 3645] gi|87286150|gb|EAQ78060.1| hypothetical protein DSM3645_18606 [Blastopirellula marina DSM 3645] Length = 371 Score = 46.4 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 1/69 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDI 80 A ++ TP +EKN + D V K + ++ + G SGL + Sbjct: 10 AELISTPAMVIDLPIVEKNLQKLHSYADQHGLHVRPHTKTHKSRYFARMQLKQGSSGLTV 69 Query: 81 VSEGELRRA 89 GE Sbjct: 70 AKVGEAEVM 78 >gi|239624944|ref|ZP_04667975.1| D-threonine aldolase [Clostridiales bacterium 1_7_47_FAA] gi|239521330|gb|EEQ61196.1| D-threonine aldolase [Clostridiales bacterium 1_7_47FAA] Length = 374 Score = 46.4 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 28/333 (8%), Positives = 69/333 (20%), Gaps = 15/333 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 V TP Y I++N + G + +K + +++ G Sbjct: 11 KEVITPALVYYLDIIKENIKKAVD-LAGGPGYLWPHVKTHKMAQMVRLQMEAGITRFKCA 69 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 + E A A A ++ + + V + +Q Sbjct: 70 TIAEAEMA--AGCGAGHVLVAYPLVGPNISRFIQLM-QAYPKVCFWTVGDNEDQIRALGQ 126 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + R N ++ N + +D + L + Sbjct: 127 LCSEAGLRANVLVDVNLGMDRTGVPVKDTEAFFMDCALMDGVSMMGLHCYDGHRTEHDFT 186 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNG----------HNIQHIDVGGGLGIAYHSDHRPP 251 + + ++ K + + + G + Sbjct: 187 QRKKEADTSAAQIKTICSHLCEKGYSCKTLVLGGSPSMPCYVDFPRTGYEVYLSPGTYFV 246 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + Y ++ + L I + T ++ + Sbjct: 247 NDYGYTMKYPDLVFTPGAAVMTRVISCPLKGHFTLDLGYKGIASDPEGTRGVIAGMEHVR 306 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 + + V P Sbjct: 307 ELFQSEEHWAFCMEPGYEDQCPRVGDELFVVPT 339 >gi|86139515|ref|ZP_01058083.1| threonine aldolase, low-specificity [Roseobacter sp. MED193] gi|85823698|gb|EAQ43905.1| threonine aldolase, low-specificity [Roseobacter sp. MED193] Length = 388 Score = 46.4 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 4/69 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLD 79 A +QTP A+E+N + K + + V+K +G G+ Sbjct: 24 AADIQTPALVLDLDALERNIKKMGDYAKAHGMRHRAHGKMHKSVDVLKLQMEIGGAIGVC 83 Query: 80 I--VSEGEL 86 VSE E+ Sbjct: 84 CQKVSEAEV 92 >gi|158422357|ref|YP_001523649.1| putative amino acid aldolase [Azorhizobium caulinodans ORS 571] gi|158329246|dbj|BAF86731.1| putative amino acid aldolase [Azorhizobium caulinodans ORS 571] Length = 369 Score = 46.4 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 21/71 (29%), Gaps = 1/71 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 V TP A E N T + + K + + + + G+ G + Sbjct: 14 DEVDTPALILDLDAFEANLDTMAALLKPTGAKLRAHAKTHKSAVIARLQMQRGAVGQCVQ 73 Query: 82 SEGELRRALAA 92 GE A Sbjct: 74 KVGEAEALAQA 84 >gi|308048328|ref|YP_003911894.1| arginine decarboxylase [Ferrimonas balearica DSM 9799] gi|307630518|gb|ADN74820.1| arginine decarboxylase [Ferrimonas balearica DSM 9799] Length = 633 Score = 46.4 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 96/298 (32%), Gaps = 28/298 (9%) Query: 28 PFYCYSTTAIEKNYL----TFSNAFDGMDTM----VCYALKANSNQAVIKTLAHLG---S 76 P + F NA Y +K N ++V+ L G Sbjct: 61 PLLVRFPEILHSQVQGLCGAFRNAISDYGYKGDYLAVYPIKVNQQRSVVTELIAGGREQL 120 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE----SESELKT 132 GL+ S+GEL LA A ++ K + + LAL + V SEL Sbjct: 121 GLEAGSKGELMAVLAMAQDAASVIVCNGYKDREYVRLALIGQKMGYEVYLVIEKMSELDL 180 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + + LG + R + S G+K + + + Sbjct: 181 VLEEGRKLGVIPRLGVRARLASQGKGKWQSSGGEKSKFGLSAAQILKLVERLRAEGQLDC 240 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL------------ 240 + + H+GSQ+ I K +LR G + +DVGGGL Sbjct: 241 LQLLHFHLGSQMSNIRDIQKGLTECGRFYMELRKIGAPVAIVDVGGGLGVDYEGTRSQSS 300 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGN-LQCKIILEPGRFLVADVGILVTKVISIKKSA 297 +S ++ YA ++I E GR + A +L+ VI ++ Sbjct: 301 CSVNYSLQEYANNVVYAIGDVCRQYQLPHPRLISESGRAMTAHHAVLIADVIGVEAYQ 358 >gi|332798070|ref|YP_004459569.1| alanine racemase domain-containing protein [Tepidanaerobacter sp. Re1] gi|332695805|gb|AEE90262.1| alanine racemase domain protein [Tepidanaerobacter sp. Re1] Length = 371 Score = 46.4 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 1/71 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIV 81 +QTP +E N D D + +K + + ++K G +G Sbjct: 4 KELQTPAILVDLDILENNIKKAQALCDAHDKELWPMIKTHKSTEIVKMQQEAGAAGFLCG 63 Query: 82 SEGELRRALAA 92 + E A Sbjct: 64 TLDECEGLAKA 74 >gi|52840262|ref|YP_094061.1| arginine decarboxylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627373|gb|AAU26114.1| biosynthetic arginine decarboxylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 630 Score = 46.4 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 60/316 (18%), Positives = 103/316 (32%), Gaps = 33/316 (10%) Query: 15 NVSLEKL---AHVVQT--PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYA--------LKA 61 V L+ + A P + + AF CYA +K Sbjct: 40 GVELQTIVDAADRAGLHLPLLIRCSDILHDRVHRIYQAFTQAREDTCYAGNYQLVYPIKV 99 Query: 62 NSNQAVIKTLAH---LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 N Q+V++ L GL+ S+ EL + + + K I A Sbjct: 100 NQEQSVVRELLKSPDNQIGLEAGSKPELMAVIGMLGDHQSTIVCNGYKDTSYIRTALIAQ 159 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E +SEL + + + L K + R+ + + + G K Sbjct: 160 QMGHKVFIVIEKKSELDIILKESARLQIKPTLGVRIRLVSKSAGKWENTGGVKSKFGLNA 219 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + + + + H+GSQI I + + +LR I I Sbjct: 220 KQVLELILQLKANDMLDCLQLMHCHLGSQIANIHDIRHCMQEVARYYIELRQLNAPIGTI 279 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVA 281 DVGGGL + Y S +YA+ I +L +I E GR L A Sbjct: 280 DVGGGLSVDYEGTRSNKGCSMNYSLVEYATHIMLALKHLCQEAEISEPDLISESGRALTA 339 Query: 282 DVGILVTKVISIKKSA 297 +L++ + ++ Sbjct: 340 HHAVLISNITDVEIIN 355 >gi|254458054|ref|ZP_05071481.1| arginine decarboxylase [Campylobacterales bacterium GD 1] gi|207085447|gb|EDZ62732.1| arginine decarboxylase [Campylobacterales bacterium GD 1] Length = 609 Score = 46.4 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 109/325 (33%), Gaps = 36/325 (11%) Query: 2 SAFKYFEGS--LHAENVS-LEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM-- 51 + F G L+ +++ L + ++T P I+K T + FD Sbjct: 12 NNFLIENGQIKLNYKSMPALLSIIEEIRTNDVKGPILLRFPHLIKKQITTLYSYFDKAIR 71 Query: 52 ------DTMVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVF 101 + + LK N +K +A G GL+ S+ EL A++ I Sbjct: 72 YNNYQGNFHAVFPLKVNQYPHAVKAIAEQGREFGYGLEAGSKAELILAMSQTTHGAPITV 131 Query: 102 S---GVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANT 158 + A +E EL+T+ + A K P +A T Sbjct: 132 NGFKDKEMMTLGFIAAQSGHNITLTIEGLGELETIIEVANECNLKVPNIGIRVRLHSAGT 191 Query: 159 HKKISTGKKEDKFGIPIHQIHSLYAYASTLPG-VKISGVDMHIGSQIDQIESFHKAFKLL 217 +G + KFG+ +I + + HIGSQ++ I +A + Sbjct: 192 GIWAKSGGMDAKFGLTSTEIIEAITLLRNENMLDNFTMIHFHIGSQMEDIAPLKRALREA 251 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI------------HQYFG 265 ++ +L+ G N + GG + H S +Y+ Sbjct: 252 GNIYAELKKMGANSLNSINIGGGLAVEYDQHTHSKSRNYSVDEFSSSVVFLIGEIMNAKN 311 Query: 266 NLQCKIILEPGRFLVADVGILVTKV 290 I E GRF+VA +L+T V Sbjct: 312 VSHPDIYTESGRFIVASHAVLITPV 336 >gi|152988604|ref|YP_001350880.1| arginine decarboxylase [Pseudomonas aeruginosa PA7] gi|150963762|gb|ABR85787.1| arginine decarboxylase [Pseudomonas aeruginosa PA7] Length = 636 Score = 46.4 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 114/318 (35%), Gaps = 36/318 (11%) Query: 9 GSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALK 60 G L +SL P ++ + AFD Y +K Sbjct: 60 GQLREAGLSL---------PLLVRFPDILQDRVRKLTGAFDANIQRLEYQSRYTALYPIK 110 Query: 61 ANSNQAVIK-TLAHLG--SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 N +AV++ +A GL+ S+ EL LA IV +G + Sbjct: 111 VNQQEAVVENIIATENVSIGLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQ 170 Query: 118 ---GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E ESE++ + + A ++G + + RV A++ + G+K Sbjct: 171 KLGHNVFIVIEKESEVQLVIEEAATVGVQPQVGLRVRLSSLASSKWADTGGEKAKFGLSA 230 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + + + + H+GSQI + + FK +LR+ G + HI Sbjct: 231 AQLLSVVERFRKAGLDQGVRLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHI 290 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVA 281 DVGGGLG+ Y H DYA G I E GR L A Sbjct: 291 DVGGGLGVDYDGTHSRNASSINYDIDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRALTA 350 Query: 282 DVGILVTKVISIKKSADK 299 +L+T+V +++ D Sbjct: 351 HHAVLITQVTDVERHIDD 368 >gi|89055095|ref|YP_510546.1| D-3-hydroxyaspartate aldolase [Jannaschia sp. CCS1] gi|88864644|gb|ABD55521.1| D-3-hydroxyaspartate aldolase [Jannaschia sp. CCS1] Length = 387 Score = 46.4 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 27/86 (31%), Gaps = 9/86 (10%) Query: 9 GSLHAENVSLEKLA----HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 L + L +QTP A+E+N + K + + Sbjct: 8 DELEV-GYDVPALPGMDEADIQTPCLVLDLDALERNIKKMGDYAREHGMRHRVHGKMHKS 66 Query: 65 QAVIKTLAHLG--SGLDI--VSEGEL 86 V K LG G+ VSE E+ Sbjct: 67 VDVAKLQEELGGACGVCCQKVSEAEV 92 >gi|54295989|ref|YP_122358.1| arginine decarboxylase [Legionella pneumophila str. Paris] gi|53749774|emb|CAH11154.1| hypothetical protein lpp0006 [Legionella pneumophila str. Paris] Length = 630 Score = 46.4 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 103/316 (32%), Gaps = 33/316 (10%) Query: 15 NVSLEKL---AHVVQT--PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L+ + A P + + AF + + Y +K Sbjct: 40 GVELQTIVDAADRAGLHLPLLIRCSDILHDRVHRIYQAFTQAREDTYYAGNYQLVYPIKV 99 Query: 62 NSNQAVIKTLAH---LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 N Q+V++ L GL+ S+ EL + + + K I A Sbjct: 100 NQEQSVVRELLKSPDNQIGLEAGSKPELMAVIGMLGDHQSTIVCNGYKDTSYIRTALIAQ 159 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E +SEL + + + L K + R+ + + + G K Sbjct: 160 QMGHKVFIVIEKKSELDIILKESARLQIKPTLGVRIRLVSKSAGKWENTGGVKSKFGLNA 219 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + + + + H+GSQI I + + +LR I I Sbjct: 220 KQVLELILQLKANDMLDCLQLMHCHLGSQIANIHDIRHCMQEVARYYIELRQLNAPISTI 279 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVA 281 DVGGGL + Y S +YA+ I +L +I E GR L A Sbjct: 280 DVGGGLSVDYEGTRSNKGCSMNYSLVEYATHIMLALKHLCQEAEIPEPDLISESGRALTA 339 Query: 282 DVGILVTKVISIKKSA 297 +LV+ + ++ Sbjct: 340 HHAVLVSNITDVEIIN 355 >gi|163790693|ref|ZP_02185120.1| predicted amino acid racemase [Carnobacterium sp. AT7] gi|159873994|gb|EDP68071.1| predicted amino acid racemase [Carnobacterium sp. AT7] Length = 385 Score = 46.0 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 27/97 (27%), Gaps = 1/97 (1%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA-NSNQAVIKTLAHLGSGLDIVSEGELRR 88 Y I +N D + + LK N A+ K L LG +V + + Sbjct: 31 YVLDLDIIRENAKKLIETAKKNDIELFFMLKQIGRNPAIAKMLVELGMKNAVVVDFREAK 90 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE 125 + V V + + G V Sbjct: 91 IMMENNIPLGNVGHLVQIPQMLLKDIMIYGSKYLTVY 127 >gi|114332153|ref|YP_748375.1| arginine decarboxylase [Nitrosomonas eutropha C91] gi|114309167|gb|ABI60410.1| arginine decarboxylase [Nitrosomonas eutropha C91] Length = 652 Score = 46.0 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 68/341 (19%), Positives = 113/341 (33%), Gaps = 35/341 (10%) Query: 1 MSAFKYF---EGSLHAENVSLEKLAHVVQT--PFYCYSTTAIEKNYLTFSNAFDGM---- 51 M LH + + + + A P I + F Sbjct: 35 MGHVSVRPIEGQDLHIDIIDVIQSARSEGASLPMLIRFQDVISSRVRRLNQTFRKAIHES 94 Query: 52 ----DTMVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSG 103 Y +K N Q V+ + G GL+ S+ EL L ++ +G Sbjct: 95 GYEGTYRSIYPIKVNQLQEVVAEVLEAGQEFNIGLECGSKAELLAMLPLVADETLLLCNG 154 Query: 104 VGKTIDEIDLALQS---GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHK 160 V + +E SE + L A + K + R+ + + Sbjct: 155 VKDRTMLTLMLNAQQIGQQVMPIIEKYSEFEQLMNLAEARQMKPRLGVRLKLNTKGSGRW 214 Query: 161 KISTGKKEDKFGIPIHQIHSLYAYASTLPG-VKISGVDMHIGSQIDQIESFHKAFKLLRD 219 S G KFG+ I ++ L ++ + H+GSQI I+ A + + Sbjct: 215 FESGGANS-KFGLTISELVQLIRTLENREMAGQLELLHFHLGSQIADIQVLRSAIREIMQ 273 Query: 220 LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS------SDYAS-------LIHQYFGN 266 + L G I+++DVGGGLG+ Y D+ P S +YA+ I Sbjct: 274 VYADLMLRGMQIKYLDVGGGLGVNYGGDYDNPESSINYGLREYANVVVYTVKEICDQRQV 333 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVA 307 +++ E GR L A +LV V+ + K Sbjct: 334 PMPQLLSESGRALTAHHSVLVVPVLGVHKPDSPYMAESPAE 374 >gi|225164353|ref|ZP_03726618.1| arginine decarboxylase [Opitutaceae bacterium TAV2] gi|224801033|gb|EEG19364.1| arginine decarboxylase [Opitutaceae bacterium TAV2] Length = 664 Score = 46.0 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 99/293 (33%), Gaps = 29/293 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTL----AHLG 75 P + + F D + +K N + V+ + G Sbjct: 67 PMVIRFQDLLRHRVEQINRCFRDAIKEEGYKGDYRGVFPIKVNQLREVVDEIVDAGKDYG 126 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIYCFNVESESELK 131 GL+ S+ EL ALA +R++ K +D I LA VE SE+ Sbjct: 127 YGLEAGSKPELMIALAMHEGKDRLIICNGYKDLDYIRLALIGRKIGKKIIIVVEQLSEVD 186 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + A +G K I FR S+G + + Sbjct: 187 DIIAVAAEIGVKPMIGFRAKLQTRGEGKWSSSSGDNAKFGLNTAEILFACDKLRKAKLTT 246 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH--- 248 + V HIGSQ+ I + A QL G + ++DVGGGLGI Y Sbjct: 247 ALRLVHFHIGSQVPNILTIKNAVIEASRFYCQLHKMGFPMGYLDVGGGLGIDYDGSRTNY 306 Query: 249 ---RPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVI 291 + ++YA + ++ +I E GR +VA +LV +V Sbjct: 307 ESSMNYTMAEYARDVVANVRDICDTAGVPLPDLISESGRAVVAPHSMLVVEVF 359 >gi|307608756|emb|CBW98138.1| hypothetical protein LPW_00051 [Legionella pneumophila 130b] Length = 630 Score = 46.0 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 103/316 (32%), Gaps = 33/316 (10%) Query: 15 NVSLEKL---AHVVQT--PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L+ + A P + + AF + + Y +K Sbjct: 40 GVELQTIVDAADRAGLHLPLLIRCSDILHDRVHRIYQAFTQAREDTYYAGNYQLVYPIKV 99 Query: 62 NSNQAVIKTLAH---LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 N Q+V++ L GL+ S+ EL + + + K I A Sbjct: 100 NQEQSVVRELLKSPDNQIGLEAGSKPELMAVIGMLGDHQSTIVCNGYKDTSYIRTALIAQ 159 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E +SEL + + + L K + R+ + + + G K Sbjct: 160 QMGHKVFIVIEKKSELDIILKESARLQIKPTLGVRIRLVSKSAGKWENTGGVKSKFGLNA 219 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + + + + H+GSQI I + + +LR I I Sbjct: 220 KQVLELILQLKANDMLDCLQLMHCHLGSQIANIHDIRHCMQEVARYYIELRQLNAPIGTI 279 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVA 281 DVGGGL + Y S +YA+ I +L II E GR L A Sbjct: 280 DVGGGLSVDYEGTRSNKGCSMNYSLVEYATHIMLALKHLCQEAEISEPDIISESGRALTA 339 Query: 282 DVGILVTKVISIKKSA 297 +L++ + ++ Sbjct: 340 HHAVLISNITDVEIIN 355 >gi|1022896|gb|AAA91036.1| WI-1 adhesin [Ajellomyces dermatitidis] Length = 1146 Score = 46.0 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 15/272 (5%), Positives = 40/272 (14%), Gaps = 10/272 (3%) Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLAL--QSGIYCFNVESESELKTLNQRAVSLG 141 EL S D + + + + ++ Sbjct: 508 WELWDKWCKDPYNCEWDSSHEKYDWKLWDKWCKDFYNCEWDSSHEKYDWELWDKWCKDSY 567 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 F D + + + + Sbjct: 568 NCDWDKFHEKYDWELWDKWCKDSYNCDWDKFHEKYDWDLWNKWCKDSYNCDWDKFHEKYD 627 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRS-----NGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 ++ ++ + + + Y Sbjct: 628 WELWDKWCKDSYNCDWDKFHEKYDWELWDKWCKDFYNCEWDSSHEKYDWELWDKWCKDPY 687 Query: 257 ASLIHQYFGNLQCKIIL-EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 ++ F D K + + + + Sbjct: 688 NCEWDSSHEKYDWELWDKWCKDFYNCDWDKFHEKYDWVLWNKWCKDPYNCEWDSSHEKYD 747 Query: 316 LYDAYHEINYIVNPAGDRLHIHAD--IVGPIC 345 N D+ H D + C Sbjct: 748 WELWDKWCKDPYNCDWDKFHEKYDWDLWNKWC 779 Score = 42.5 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 17/262 (6%), Positives = 33/262 (12%), Gaps = 3/262 (1%) Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + G D ++ L T N Sbjct: 350 YDKDPYKCDWDLWNQLCSGNGHHFYDCDWDVSYPGYDSHLWDLLCTNNPYNCEWDSSHEK 409 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 D +K+ + Y Sbjct: 410 YDWELWDKWCKDPYNCDWDSSHEKYDWDLWNKWCKDPYNCEWDSSHEKYDWELWDKWCKD 469 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + + + + + Y Sbjct: 470 PYNCDWDSSHEKYDWDLWNKWCKDPYNCEWDSSHEKYDWELWDKWCKDPYNCEWDSSHEK 529 Query: 267 LQCKIIL-EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 K+ F + K + Sbjct: 530 YDWKLWDKWCKDFYNCEWDSSHEKYDWELWDKWCKDSYNCDWDKFHEKYDWELWDKWCKD 589 Query: 326 IVNPAGDRLHIHAD--IVGPIC 345 N D+ H D + C Sbjct: 590 SYNCDWDKFHEKYDWDLWNKWC 611 Score = 39.8 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 14/246 (5%), Positives = 42/246 (17%), Gaps = 1/246 (0%) Query: 101 FSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHK 160 + + + +N + + N + Sbjct: 246 WCKDPYNCEWNSFHEKYDWELWNKWCKDSYNCEWDSSHEKYDWELWNKWCKDPYNCDWDS 305 Query: 161 KISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL 220 Y K + + + + L L Sbjct: 306 SHEKFDWGLWSHWCNDYDKYPYNCEWDSSHKKYDLTLWNRWCSSYDKDPYKCDWDLWNQL 365 Query: 221 TQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ-CKIILEPGRFL 279 + ++ G + + + + + Sbjct: 366 CSGNGHHFYDCDWDVSYPGYDSHLWDLLCTNNPYNCEWDSSHEKYDWELWDKWCKDPYNC 425 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 D K + + ++ L+D + + Y + D Sbjct: 426 DWDSSHEKYDWDLWNKWCKDPYNCEWDSSHEKYDWELWDKWCKDPYNCDWDSSHEKYDWD 485 Query: 340 IVGPIC 345 + C Sbjct: 486 LWNKWC 491 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 15/229 (6%), Positives = 39/229 (17%), Gaps = 9/229 (3%) Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + S + + + F Y Sbjct: 124 WPTSHVSYSWYLHDYLCGNGHHPYDCELDSSHEDYSWPLWFKWCSGHGRHFYDCKWDNDH 183 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ--LRSNGHNIQHIDVGGGLGIAYHSDH 248 K + ++ + + + + + Sbjct: 184 EKYDWPLWQYWCGSHDKDPYNCDWDKFHEKYDWELWNKWCKDPYNCEWDSSHEKYDWELW 243 Query: 249 RPPSSSDYASLIHQYF---GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILD 305 Y + + + D K + Sbjct: 244 NKWCKDPYNCEWNSFHEKYDWELWNKWCKDSYNCEWDSSHEKYDWELWNKWCKDPYNCDW 303 Query: 306 VAMNDFMRPTLYDAYHEIN--YIVNPAGDRLHIHADI--VGPICETGDF 350 + ++ L+ + Y N D H D+ C + D Sbjct: 304 DSSHEKFDWGLWSHWCNDYDKYPYNCEWDSSHKKYDLTLWNRWCSSYDK 352 >gi|6715490|gb|AAF26434.1| arginine decarboxylase [Brassica juncea] Length = 692 Score = 46.0 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 87/261 (33%), Gaps = 29/261 (11%) Query: 15 NVSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMV 55 ++ L K+ V Q P ++ +AFD G Sbjct: 72 DIDLLKVVKKVTDPKPLGGLGLQLPVIVRFPDVLKNRLECLQSAFDLAVQSQGYGSHYQG 131 Query: 56 CYALKANSNQAVIKTLAHLGSGL----DIVSEGELRRALAAPVPAERIVF-SGVGKTIDE 110 Y +K N ++ +++ + GSG + S+ E+ A++ R F G E Sbjct: 132 VYPVKCNQDRFIVEDIVKFGSGFRFGLEAGSKPEILLAMSCLSKGNREAFLVCNGFKDVE 191 Query: 111 IDLALQSG-----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 G +E E EL + + + + I R + H ++G Sbjct: 192 YISLALLGRKLALNTVIVLEQEEELDLVIDLSRKMNVRPVIGLRAKLRTKHSGHFGSTSG 251 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 +K + + + + + HIGSQI L +L Sbjct: 252 EKGKFGLTTGQIVRVVRRLRESCMLDCLQLLHFHIGSQIPSTALLSDGVGEAAQLYCELV 311 Query: 226 SNGHNIQHIDVGGGLGIAYHS 246 G +++ IDVGGGLGI Y Sbjct: 312 RLGADMKVIDVGGGLGIDYDG 332 >gi|254502163|ref|ZP_05114314.1| Alanine racemase, N-terminal domain family [Labrenzia alexandrii DFL-11] gi|222438234|gb|EEE44913.1| Alanine racemase, N-terminal domain family [Labrenzia alexandrii DFL-11] Length = 387 Score = 46.0 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V K LG G+ Sbjct: 25 KDIQTPCLVLDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVAKLQERLGGAVGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|110635638|ref|YP_675846.1| alanine racemase-like [Mesorhizobium sp. BNC1] gi|110286622|gb|ABG64681.1| alanine racemase-like protein [Chelativorans sp. BNC1] Length = 388 Score = 46.0 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 8/80 (10%) Query: 15 NVSLEKL---AHV-VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 + L A +QTP A+E+N + K + + V+K Sbjct: 14 GYDVPALPGMAEADIQTPCLILDLDALERNIKKMGDYARAHGMRHRAHGKMHKSVDVLKL 73 Query: 71 LAHLG--SGLDI--VSEGEL 86 LG G+ VSE E+ Sbjct: 74 QMELGGAIGVCCQKVSEAEV 93 >gi|239996379|ref|ZP_04716903.1| arginine decarboxylase [Alteromonas macleodii ATCC 27126] Length = 636 Score = 46.0 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 68/315 (21%), Positives = 112/315 (35%), Gaps = 32/315 (10%) Query: 18 LEKLAHV-VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVI 68 +E + VQ P + + AF Y +K N + V+ Sbjct: 50 IEDIRKEGVQFPVVVRFHDILRSQVAGLNKAFRSSIEEAEYQGQYQGVYPVKVNQMREVV 109 Query: 69 KTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIY 120 + + G GL+ S+ EL LA E + K + + LA Sbjct: 110 EEIVDAGKPFNYGLEAGSKAELLTVLAMNTNEESLTILNGYKDDEVMRLALLGRKLGRRV 169 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 VE +EL L + A L I R + K S+G + KFG+ I +I + Sbjct: 170 VVVVEKYTELLLLVKIAKELDIDPIIGVRSKMTVKGRG-KWESSGGERAKFGLTITEIIN 228 Query: 181 LYAYASTLPG-VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y + + HIGSQ+ I + +A + L G + ++DVGGG Sbjct: 229 AARYLEEQGMAHCLKLLHFHIGSQLTDIRAVKEAVTEGARIYADLHKMGFELDYVDVGGG 288 Query: 240 LGIAYHSDH------RPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGIL 286 LGI Y + R S +Y + + + ++ E GR + A + Sbjct: 289 LGIDYDGSNSTNESSRNYSMQEYVADVVYGMKEMCDLEGVPHPHLVSESGRAITAHHSCV 348 Query: 287 VTKVISIKKSADKTF 301 +T+++ KS Sbjct: 349 ITEIVGEIKSNASQM 363 >gi|172062516|ref|YP_001810167.1| alanine racemase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171995033|gb|ACB65951.1| alanine racemase domain protein [Burkholderia ambifaria MC40-6] Length = 376 Score = 46.0 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + N D + +K Q V+ G+ G+ + + E Sbjct: 8 TPAALIDVDRMRNNIARMQAHLDALGVKFRPHVKTTKCQQVVDAQIAAGAQGITVSTLKE 67 Query: 86 LRRALAA 92 + AA Sbjct: 68 AEQFFAA 74 >gi|115360046|ref|YP_777184.1| alanine racemase domain-containing protein [Burkholderia ambifaria AMMD] gi|115285334|gb|ABI90850.1| alanine racemase domain protein [Burkholderia ambifaria AMMD] Length = 376 Score = 46.0 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + N D + +K Q V+ G+ G+ + + E Sbjct: 8 TPAALIDVDRMRNNIARMQAHLDALGVKFRPHVKTTKCQQVVDAQIAAGAQGITVSTLKE 67 Query: 86 LRRALAA 92 + AA Sbjct: 68 AEQFFAA 74 >gi|148358145|ref|YP_001249352.1| biosynthetic arginine decarboxylase [Legionella pneumophila str. Corby] gi|296105503|ref|YP_003617203.1| arginine decarboxylase [Legionella pneumophila 2300/99 Alcoy] gi|148279918|gb|ABQ54006.1| biosynthetic arginine decarboxylase [Legionella pneumophila str. Corby] gi|295647404|gb|ADG23251.1| arginine decarboxylase [Legionella pneumophila 2300/99 Alcoy] Length = 630 Score = 46.0 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 103/316 (32%), Gaps = 33/316 (10%) Query: 15 NVSLEKL---AHVVQT--PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L+ + A P + + AF + + Y +K Sbjct: 40 GVELQTIVDAADRAGLHLPLLIRCSDILHDRVHRIYQAFTQAREDTYYAGNYQLVYPIKV 99 Query: 62 NSNQAVIKTLAH---LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 N Q+V++ L GL+ S+ EL + + + K I A Sbjct: 100 NQEQSVVRELLKSPDNQIGLEAGSKPELMAVIGMLGDHQSTIVCNGYKDTSYIRTALIAQ 159 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E +SEL + + + L K + R+ + + + G K Sbjct: 160 QMGHKVFIVIEKKSELDIILKESARLQIKPTLGVRIRLVSKSAGKWENTGGVKSKFGLNA 219 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + + + + H+GSQI I + + +LR I I Sbjct: 220 KQVLELILQLKANDMLDCLQLMHCHLGSQIANIHDIRHCMQEVARYYIELRQLNAPIGTI 279 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVA 281 DVGGGL + Y S +YA+ I +L +I E GR L A Sbjct: 280 DVGGGLSVDYEGTRSNKGCSMNYSLVEYATHIMLALKHLCQEAEIPEPDLISESGRALTA 339 Query: 282 DVGILVTKVISIKKSA 297 +L++ + ++ Sbjct: 340 HHAVLISNITDVEIIN 355 >gi|54292970|ref|YP_125385.1| arginine decarboxylase [Legionella pneumophila str. Lens] gi|53752802|emb|CAH14236.1| hypothetical protein lpl0006 [Legionella pneumophila str. Lens] Length = 630 Score = 46.0 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 103/316 (32%), Gaps = 33/316 (10%) Query: 15 NVSLEKL---AHVVQT--PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKA 61 V L+ + A P + + AF + + Y +K Sbjct: 40 GVELQTIVDAADRAGLHLPLLIRCSDILHDRVHRIYQAFTQAREDTYYAGNYQLVYPIKV 99 Query: 62 NSNQAVIKTLAH---LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA---- 114 N Q+V++ L GL+ S+ EL + + + K I A Sbjct: 100 NQEQSVVRELLKSPDNQIGLEAGSKPELMAVIGMLGDHQSTIVCNGYKDTSYIRTALIAQ 159 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 +E +SEL + + + L K + R+ + + + G K Sbjct: 160 QMGHKVFIVIEKKSELDIILKESARLQIKPTLGVRIRLVSKSAGKWENTGGVKSKFGLNA 219 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + + + + H+GSQI I + + +LR I I Sbjct: 220 KQVLELILQLKANDMLDCLQLMHCHLGSQIANIHDIRHCMQEVARYYIELRQLNAPIGTI 279 Query: 235 DVGGGLGIAYHSDH------RPPSSSDYASLIHQYFGNLQC-------KIILEPGRFLVA 281 DVGGGL + Y S +YA+ I +L +I E GR L A Sbjct: 280 DVGGGLSVDYEGTRSNKGCSMNYSLVEYATHIMLALKHLCQEAEISEPDLISESGRALTA 339 Query: 282 DVGILVTKVISIKKSA 297 +L++ + ++ Sbjct: 340 HHAVLISNITDVEIIN 355 >gi|21325381|dbj|BAC00003.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] Length = 380 Score = 46.0 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 20/69 (28%), Gaps = 1/69 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + N + + + +K + + + G+ G+ + GE Sbjct: 42 TPAVLIDRERLTANISRMAAHAGAHEIALRPHVKTHKIIEIAQMQVDAGARGITCATIGE 101 Query: 86 LRRALAAPV 94 A Sbjct: 102 AEIFAGAGF 110 >gi|19553808|ref|NP_601810.1| hypothetical protein NCgl2520 [Corynebacterium glutamicum ATCC 13032] gi|62391448|ref|YP_226850.1| hypothetical protein cg2890 [Corynebacterium glutamicum ATCC 13032] gi|41326789|emb|CAF21271.1| PUTATIVE AMINO ACID PROCESSING ENZYME [Corynebacterium glutamicum ATCC 13032] Length = 343 Score = 46.0 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 20/69 (28%), Gaps = 1/69 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + N + + + +K + + + G+ G+ + GE Sbjct: 5 TPAVLIDRERLTANISRMAAHAGAHEIALRPHVKTHKIIEIAQMQVDAGARGITCATIGE 64 Query: 86 LRRALAAPV 94 A Sbjct: 65 AEIFAGAGF 73 >gi|309812008|ref|ZP_07705774.1| alanine racemase, N-terminal domain protein [Dermacoccus sp. Ellin185] gi|308434066|gb|EFP57932.1| alanine racemase, N-terminal domain protein [Dermacoccus sp. Ellin185] Length = 200 Score = 46.0 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 1/70 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIVSEGE 85 TP +E+N ++ + +K + + G+ + + GE Sbjct: 4 TPRLVADLDVLERNIDAMASLGRDAGVALRPHVKTHKMPEIATMQRDAATHGITVATIGE 63 Query: 86 LRRALAAPVP 95 + A Sbjct: 64 AEVFVDAGFD 73 >gi|256828939|ref|YP_003157667.1| alanine racemase domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256578115|gb|ACU89251.1| alanine racemase domain protein [Desulfomicrobium baculatum DSM 4028] Length = 382 Score = 46.0 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 18/60 (30%), Gaps = 1/60 (1%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 + S LA TP +E+N + + LK + V + L Sbjct: 1 MNDHSTPILASQ-GTPCLLVDEERMERNIARLRDRLRAAEVAFRPHLKTAKSWEVSRLLM 59 >gi|311032754|ref|ZP_07710844.1| alanine racemase domain protein [Bacillus sp. m3-13] Length = 390 Score = 46.0 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 19/67 (28%), Gaps = 1/67 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 TP + KN S+ + +K + + + K G+ G+ Sbjct: 7 EFDTPTLILDGQILLKNIRKMSDFAKENKVNLRPHIKTHKSVEIAKLQLEHGAIGITTAK 66 Query: 83 EGELRRA 89 E Sbjct: 67 LEEAEVM 73 >gi|288960554|ref|YP_003450894.1| alanine racemase domain-containing protein [Azospirillum sp. B510] gi|288912862|dbj|BAI74350.1| alanine racemase domain-containing protein [Azospirillum sp. B510] Length = 352 Score = 46.0 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 19/74 (25%), Gaps = 1/74 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + TP +E N D + +K + + LG+ G+ Sbjct: 3 VDELDTPVPVIDLDRVEHNLTKMQAYCDRHGLALRPHIKTHKLPQFARRQIELGAVGITC 62 Query: 81 VSEGELRRALAAPV 94 E A Sbjct: 63 QKISEAMVMADAGC 76 >gi|254460291|ref|ZP_05073707.1| threonine aldolase [Rhodobacterales bacterium HTCC2083] gi|206676880|gb|EDZ41367.1| threonine aldolase [Rhodobacteraceae bacterium HTCC2083] Length = 386 Score = 46.0 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 4/69 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLD 79 A +QTP A+E+N + K + + V K LG G+ Sbjct: 23 AADIQTPALVLDLDALERNIKKMGDYAKSHGMRHRVHGKMHKSVDVAKLQESLGGACGVC 82 Query: 80 I--VSEGEL 86 VSE E+ Sbjct: 83 CQKVSEAEV 91 >gi|163803506|ref|ZP_02197376.1| carboxynorspermidine decarboxylase [Vibrio sp. AND4] gi|159172682|gb|EDP57533.1| carboxynorspermidine decarboxylase [Vibrio sp. AND4] Length = 149 Score = 46.0 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 18/61 (29%) Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLL 387 A + I C GD + G L+I + Y V+ +N + Sbjct: 57 REASENGKYEYVIGSCSCLAGDQFCVTNFEQPIEIGQRLHILDSAGYTMVKLNWFNGLRM 116 Query: 388 I 388 Sbjct: 117 P 117 >gi|46371995|gb|AAP36992.2| arginine decarboxylase [Cucumis sativus] Length = 717 Score = 46.0 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 23/104 (22%) Query: 16 VSLEKLAHV-----------VQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVC 56 + L K+ +Q P ++ + +AFD G Sbjct: 98 IDLLKIVKKASDPICSGGLGLQLPLIVRFPDVLKNRLESLQSAFDYAIQSQGYGSHYQGV 157 Query: 57 YALKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPA 96 Y +K N ++ V++ + GS GL+ S+ EL A++ Sbjct: 158 YPVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPELLLAMSCLCKG 201 >gi|254423696|ref|ZP_05037414.1| arginine decarboxylase [Synechococcus sp. PCC 7335] gi|196191185|gb|EDX86149.1| arginine decarboxylase [Synechococcus sp. PCC 7335] Length = 681 Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 96/256 (37%), Gaps = 25/256 (9%) Query: 14 ENVSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALK 60 ++ L++L Q P + +E + F Y +K Sbjct: 86 GSLDLKQLIEGLKQRDFQLPVLIRFSEILEDRLERINACFAKAIARYSYEGVYQGVFPVK 145 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 N + +++ L G GL+ ++ EL ALA+ ++ K I+ A+ Sbjct: 146 CNQQRHIVEDLVRFGKAFQFGLEAGTKPELMIALASLNTPGALIICNGYKDESYIETAML 205 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA-----NTHKKISTGKKEDKF 171 E + + AV++ + + N + A + + ++ KF Sbjct: 206 GQRLGQKPIIVLE--QVEEVAVAIATAKRLGIQPNLGVRAKLAAKGSGRWGTSAGDRAKF 263 Query: 172 GIPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 G+ I +I ++ + + + HIGSQ++ I A + + +L S G Sbjct: 264 GLTIPEIITVVEKLKAADMLDSLQLLHFHIGSQVNAISVIKDAMREACQIYVELVSLGAP 323 Query: 231 IQHIDVGGGLGIAYHS 246 + ++DVGGGLG+ Y Sbjct: 324 MGYLDVGGGLGVDYDG 339 >gi|39997632|ref|NP_953583.1| arginine decarboxylase [Geobacter sulfurreducens PCA] gi|123459994|sp|A0A4W3|SPEA_GEOSL RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|39984524|gb|AAR35910.1| biosynthetic arginine decarboxylase [Geobacter sulfurreducens PCA] gi|298506571|gb|ADI85294.1| biosynthetic arginine decarboxylase [Geobacter sulfurreducens KN400] Length = 635 Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 101/252 (40%), Gaps = 21/252 (8%) Query: 16 VSLEKLAH-----VVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 + L L ++ P ++ + + F Y +K N Sbjct: 43 IDLRALVDDLIKRKIKPPILLRFMDVLQGRIASINRVFKNAIDENDYPATYQTFYPIKVN 102 Query: 63 SNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 + V++ +A G GL++ S+ EL ++ + K + I+ L + Sbjct: 103 QQRQVVEAIAKFGKRYNIGLEVGSKPELVIGISFATGNGIPIICNGYKDTEYIETVLYAT 162 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPI 175 +++ E ++ ++L KK I ++ + + T K ++G ++ KFG+ + Sbjct: 163 KIGYDITIVVEKMFELEKIIALSKKTGIKPKLGIRVKLSSKGTGKWATSGGEDAKFGLRM 222 Query: 176 HQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 +I + ++ + HIGSQI +I+ A + ++R G I+++ Sbjct: 223 SEIIAAIGLLEQNDLLDRVKLLHFHIGSQITKIDKIKSALIEGTRIYAEMRKLGVGIRYV 282 Query: 235 DVGGGLGIAYHS 246 D+GGGLG+ Y Sbjct: 283 DIGGGLGVDYDG 294 >gi|257460796|ref|ZP_05625897.1| GlnD family protein [Campylobacter gracilis RM3268] gi|257442127|gb|EEV17269.1| GlnD family protein [Campylobacter gracilis RM3268] Length = 368 Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 5/75 (6%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 +S+ + TP + +N + D + K + K LG Sbjct: 1 MSVSDI----DTPALLIDREIVLRNLQKMQSYADAAGVSLRPHTKTHKMPYFAKLQKSLG 56 Query: 76 -SGLDIVSEGELRRA 89 +G+ + GE Sbjct: 57 AAGITVAKTGEAEIM 71 >gi|298244439|ref|ZP_06968245.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963] gi|297551920|gb|EFH85785.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963] Length = 370 Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 70/217 (32%), Gaps = 6/217 (2%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 + TP T +E+N F V LK + + + L G+ G + Sbjct: 11 DELDTPSMIVDLTLMEENIDRLMQRFREKKIHVRPHLKTVKSPELARRLLAAGAVGGCVA 70 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E + A + ++ + ++ + + ++ + Q + Sbjct: 71 KVSEAE--VMAQEGIDDLLITTEIVGKPKLSRLVTLIQHHPRIKVVIDSFIGAQELNTAL 128 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 +A + V D+N ++ KE G HI Sbjct: 129 HEAQLEIDVLIDLNVGQNRCGVLPGKEALTLAHYCSKLPHLHLVGVQGY---EGHLQHIH 185 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 S ++ + H+A +LL + QLR G I+ + GG Sbjct: 186 SPEERTQRCHQAMRLLTETAAQLRFEGFPIEVVTTGG 222 >gi|260430565|ref|ZP_05784538.1| metal-activated pyridoxal enzyme [Citreicella sp. SE45] gi|260418594|gb|EEX11851.1| metal-activated pyridoxal enzyme [Citreicella sp. SE45] Length = 387 Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V K LG G+ Sbjct: 25 ADIQTPCLVLDLDALERNIRKMGDYARAHGMRHRVHGKMHKSVDVAKLQMRLGGAIGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|294102773|ref|YP_003554631.1| alanine racemase domain protein [Aminobacterium colombiense DSM 12261] gi|293617753|gb|ADE57907.1| alanine racemase domain protein [Aminobacterium colombiense DSM 12261] Length = 377 Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 21/75 (28%), Gaps = 5/75 (6%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 + L TP +E+N + +K + + K Sbjct: 8 SFRGCEITDL----DTPSLLVDLDVMERNISWMQQKAQRAGVNLRPHIKTHRTPDIAKKQ 63 Query: 72 AHLGS-GLDIVSEGE 85 G+ G+ + GE Sbjct: 64 LAAGAKGITVAKLGE 78 >gi|170697287|ref|ZP_02888381.1| alanine racemase domain protein [Burkholderia ambifaria IOP40-10] gi|170137907|gb|EDT06141.1| alanine racemase domain protein [Burkholderia ambifaria IOP40-10] Length = 376 Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + N D + +K Q V+ G+ G+ + + E Sbjct: 8 TPAALIDVDRMRNNIARMQAHLDALGVRFRPHVKTTKCQHVVDAQIAGGAQGITVSTLKE 67 Query: 86 LRRALAA 92 + AA Sbjct: 68 AEQFFAA 74 >gi|218886631|ref|YP_002435952.1| arginine decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757585|gb|ACL08484.1| arginine decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 645 Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 94/257 (36%), Gaps = 21/257 (8%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 VS+ ++ P ++ + +F + + +K N Sbjct: 56 VSIPEIIRGMRERGYDMPVLLRIENILDSQITSLHQSFRKAIGSLGYKGEYRGIFPIKVN 115 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID---LAL 115 Q V++ +A GS GL++ S+ EL A++ E + K + ID A+ Sbjct: 116 QQQQVVEKIAQFGSRYHHGLEVGSKAELIAAVSQLRDHEACLVCNGYKDEEFIDLGLHAV 175 Query: 116 QSGIYCFNVESE-SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 + G CF V SEL + +R+ LG + I R + A H S G++ Sbjct: 176 RMGYKCFFVLEMASELPLILERSKCLGVRPLIGVRAKLSVKAGGHWTDSGGERSTFGLTT 235 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + + H+GSQ+ I A + L + G + ++ Sbjct: 236 AQIVDVVDQLKDHDMLDCFQLLHYHLGSQVPNIRDIRAAVMEACRIYGGLVAEGAAMGYL 295 Query: 235 DVGGGLGIAYHSDHRPP 251 D+GGGL + Y H Sbjct: 296 DLGGGLAVDYDGSHTNY 312 >gi|326201060|ref|ZP_08190932.1| arginine decarboxylase [Clostridium papyrosolvens DSM 2782] gi|325988628|gb|EGD49452.1| arginine decarboxylase [Clostridium papyrosolvens DSM 2782] Length = 639 Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 87/242 (35%), Gaps = 16/242 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTLAHLG---- 75 P ++ +N+F+ + Y +K N Q V++ + G Sbjct: 67 PVLLRFENLLDSQISFLNNSFNEAMHKLNYKGAYRGVYPIKVNQQQQVVEEVTRFGQRYH 126 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID----LALQSGIYCFNVESESELK 131 GL++ S+ EL AL+ E + K + ID F +E EL Sbjct: 127 HGLEVGSKAELVAALSVMKDKEACLICNGYKDEEFIDLGLYSVKMGFKCFFVIEIPGELD 186 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + +R+ +LG K I R+ A H S G + I + Sbjct: 187 IVLERSRALGIKPNIGIRIKLSAKAGGHWTESGGDRSIFGLNMSQVISMVDRLKEEGMLD 246 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + H+GSQI I A + +L G + ++D+GGGL + Y + Sbjct: 247 SLKLLHYHLGSQIPNIRDIRSAVLEAARVYAELVKEGAPMGYLDLGGGLAVDYDGSNTNY 306 Query: 252 SS 253 ++ Sbjct: 307 TN 308 >gi|218671111|ref|ZP_03520782.1| probable ornithine decarboxylase protein [Rhizobium etli GR56] Length = 210 Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 13/216 (6%) Query: 69 KTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 K LA LGS D S E+ AL A A RI F K ++ A G+ F V+S Sbjct: 1 KLLAGLGSNFDCASVAEIEMALEAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHE 60 Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 E++ +++ A + T + + KFG + YA L Sbjct: 61 EVEKISRAAPGARVFCRVL----------TDGEGAEWPLSRKFGCVPQMAVDVLVYAHQL 110 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 GV H+GSQ+ +++++ A + + L G ++Q +++GGG Y D Sbjct: 111 GLQS-YGVSFHVGSQMTKVDAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDV 169 Query: 249 RPPSSS--DYASLIHQYFGNLQCKIILEPGRFLVAD 282 + + +FGN + I+EPGR +V + Sbjct: 170 PSAEAYGKSIYQALRTHFGNQIPQTIIEPGRGMVGN 205 >gi|224825180|ref|ZP_03698286.1| arginine decarboxylase [Lutiella nitroferrum 2002] gi|224602851|gb|EEG09028.1| arginine decarboxylase [Lutiella nitroferrum 2002] Length = 629 Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 72/346 (20%), Positives = 124/346 (35%), Gaps = 34/346 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTL---AHLGS 76 P ++ AFD V Y +K N +AVIK++ + + Sbjct: 60 PLLVRFPDILQDRVTRLCGAFDKAIADVGYGSQYTALYPIKVNQQEAVIKSIIATSSVSI 119 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY-----CFNVESESELK 131 GL+ S+ EL LA + + G + G +E E E+ Sbjct: 120 GLEAGSKPELMAVLALA--PKGCTITCNGYKDRDFVRLALIGQKLGHRVFIVIEKEVEVD 177 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + A LG + + RV + ++ TG ++ KFG+ Q+ + Sbjct: 178 LVIEEAQKLGVRPLVGVRVRLSSLNSDNQWADTGGEKGKFGLSASQLIDVAGKMDAAGMA 237 Query: 192 K-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH-- 248 + + H+GSQI I + F+ +LR G I H+DVGGGLG+ Y H Sbjct: 238 DCVRLLHFHMGSQIANIADYRLGFREAIRYFGELRDLGLPIDHVDVGGGLGVDYDGTHSR 297 Query: 249 ----RPPSSSDYAS-------LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 +YA G +I+ E GR + A +L+ V +++ Sbjct: 298 NASSINYDMEEYAHVIVSMLAEFCDENGLPHPRIMSESGRAMTAHHAVLIMNVTDVERLP 357 Query: 298 DKTFVILDVAMNDFMRPTLYD--AYHEINYIVNPAGDRLHIHADIV 341 + + D+ M LY+ + + H A++ Sbjct: 358 ESVPELDDLDMLAQPVRKLYELTHLTDAEMVTETYHRASHYVAEVA 403 >gi|12229969|sp|O82475|SPE1_BRAJU RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC gi|3342902|gb|AAC62017.1| arginine decarboxylase [Brassica juncea] Length = 702 Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 83/244 (34%), Gaps = 20/244 (8%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLA 72 LA P ++ + +AF+ Y +K N ++ +I+ + Sbjct: 96 LALQF--PLIVRFPDVLKNRLESLQSAFEFAIQTQGYESRYQGVYPVKCNQDRFIIEDIV 153 Query: 73 HLGS----GLDIVSEGE--LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV-- 124 GS GL+ S+ E L + E + K + + LAL N Sbjct: 154 EFGSSFRFGLEAGSKPEILLAMSCLCKGSPEAFLVCNGFKDAEYVSLALLGRKLQLNTVI 213 Query: 125 --ESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 E E EL + + + + I R + H ++G+K + I + Sbjct: 214 VLEQEEELDLVIALSKKVNVRPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTVQIIRVVR 273 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 + + HIGSQI L +L G ++ ID+GGGLGI Sbjct: 274 KLRDVGMLDCLQLLHFHIGSQIPSTALLSDGVSEAAQLYCELVRLGARMEVIDIGGGLGI 333 Query: 243 AYHS 246 Y Sbjct: 334 DYDG 337 >gi|299533035|ref|ZP_07046422.1| alanine racemase-like protein [Comamonas testosteroni S44] gi|298719259|gb|EFI60229.1| alanine racemase-like protein [Comamonas testosteroni S44] Length = 394 Score = 45.6 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 3/67 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI- 80 + TP A+++N + + K + + + L H G+ Sbjct: 16 VKRIDTPALVIDLDAMDRNIERMARFAQQHGVLWRPHAKLHKSAHIAHLLEHAGACGHCV 75 Query: 81 --VSEGE 85 VSE E Sbjct: 76 QKVSEAE 82 >gi|264680409|ref|YP_003280319.1| alanine racemase [Comamonas testosteroni CNB-2] gi|262210925|gb|ACY35023.1| alanine racemase-like protein [Comamonas testosteroni CNB-2] Length = 394 Score = 45.6 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 3/67 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI- 80 + TP A+++N + + K + + + L H G+ Sbjct: 16 VKRIDTPALVIDLDAMDRNIERMARFAQQHGVLWRPHAKLHKSAHIAHLLEHAGACGHCV 75 Query: 81 --VSEGE 85 VSE E Sbjct: 76 QKVSEAE 82 >gi|221064978|ref|ZP_03541083.1| alanine racemase domain protein [Comamonas testosteroni KF-1] gi|220710001|gb|EED65369.1| alanine racemase domain protein [Comamonas testosteroni KF-1] Length = 394 Score = 45.6 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 3/67 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI- 80 + TP A+++N + + K + + + L H G+ Sbjct: 16 VKRIDTPALVIDLDAMDRNIERMARFAQQHGVLWRPHAKLHKSAHIAHLLEHAGACGHCV 75 Query: 81 --VSEGE 85 VSE E Sbjct: 76 QKVSEAE 82 >gi|126444781|ref|YP_001061081.1| Orn/DAP/Arg decarboxylase family protein [Burkholderia pseudomallei 668] gi|126224272|gb|ABN87777.1| Orn/DAP/Arg decarboxylase family 2 [Burkholderia pseudomallei 668] Length = 38 Score = 45.6 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 357 IALPRPGDLLYIEKTGAYGAVQSGT-YNSRLLIPEIMV 393 +A RPGDLL + ++GAYG S + S+ E++V Sbjct: 1 MATARPGDLLVVFQSGAYGLTASPNGFLSQPAAREVIV 38 >gi|163869624|gb|ABY47890.1| arginine decarboxylase [Oryza sativa Japonica Group] Length = 702 Score = 45.6 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 97/275 (35%), Gaps = 19/275 (6%) Query: 31 CYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLG----SGL 78 + + AFD G Y +K N ++ V++ + G GL Sbjct: 114 VRFPDVLRHRVEALNAAFDYAVRSTGYGGRYQGVYPVKCNQDRHVVEDIVEFGEPFRFGL 173 Query: 79 DIVSEGEL---RRALAAPVPAERIVFSGVGKTIDEID---LALQSGIYCFNVESESELKT 132 + S+ EL LAA + ++ K + + +A G+ V + E Sbjct: 174 EAGSKPELLLAMSCLAARGNPDALLICNGYKDDEYVSLALIARTMGLNTVIVLEQEEELD 233 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + A P+ + ST ++ KFG+ QI S+ A TL + Sbjct: 234 IMVDASRRLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNAAQILSVVAKLKTLGMLD 293 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI + +L G ++ IDVGGGLGI Y H Sbjct: 294 CLQLLHFHIGSQIPTTALLGDGVGEAAQIYCELARLGAAMRVIDVGGGLGIDYDGSHSAQ 353 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 + A + +Y + + R VA I Sbjct: 354 TDMSVAYSLEEYAAAVVAAVGRVCDRKGVAHPIIC 388 >gi|225427782|ref|XP_002269030.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 720 Score = 45.6 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 103/310 (33%), Gaps = 29/310 (9%) Query: 6 YFEGSLHAENVSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFD----- 49 Y + +L + + L K+ V Q P ++ + +AFD Sbjct: 84 YGKNTLPHQEIDLMKIVKKVSDPKSAGGLGLQLPLIVRLPDVLQNRLESLQSAFDFAIQS 143 Query: 50 ---GMDTMVCYALKANSNQAVIKTLAHLGS----GLDIVSEGE--LRRALAAPVPAERIV 100 + +K N ++ +++ + GS GL+ S+ E L + E ++ Sbjct: 144 QGYESHYQGVFPVKCNQDRFIVEDVVKFGSAFRFGLEAGSKPELLLAMSCLCKGNPEALL 203 Query: 101 FSGVGKTIDEIDLALQSG----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA 156 K D I LAL + +E E EL + + L I R Sbjct: 204 VCNGFKDADYIALALVARKLALNTVIVLEQEEELDLVINLSQKLSVHPVIGVRAKLRTKH 263 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL 216 H ++G+K I + + + + HIGSQI + Sbjct: 264 AGHFGSTSGEKGKFGLTTIQILRVVRKLEQAGMLDSLQLLHFHIGSQIPSTDLLADGVSE 323 Query: 217 LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPG 276 + +L G +++ ID+GGGLGI Y S + +Y + + Sbjct: 324 AAQIYCELVRLGAHMRVIDIGGGLGIDYDGSKSSESDISVGYGLEEYAMAVVRAVQHVCD 383 Query: 277 RFLVADVGIL 286 R V I Sbjct: 384 RKSVKHPVIC 393 >gi|317455890|gb|ADV29037.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 45.6 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 94/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 + S+ EL A+++ E ++ K + I LAL + N E E E Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + ++ + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVWKLKESGM 245 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI + + +L G + ID+GGGLGI Y Sbjct: 246 LDCLQLLHFHIGSQIPSTQLLADGVGEAAQVYSELVRLGAGMNFIDIGGGLGIDYDGTKS 305 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + Y + + R V I Sbjct: 306 SDSDVSVGYGLQDYASTVVQAVRFVCDRKNVKHPVIC 342 >gi|170747958|ref|YP_001754218.1| alanine racemase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170654480|gb|ACB23535.1| alanine racemase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 373 Score = 45.6 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 21/68 (30%), Gaps = 4/68 (5%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN--SNQAVIKTLAHLGSGLD 79 V TP A+E+N K + S+ V++ G+ Sbjct: 13 VEEVDTPCLLVDLDALERNVDKLGRFMKAHGLRHRAHAKTHKSSDITVLQIERGGACGVC 72 Query: 80 I--VSEGE 85 VSE E Sbjct: 73 CQKVSEAE 80 >gi|332716644|ref|YP_004444110.1| alanine racemase [Agrobacterium sp. H13-3] gi|325063329|gb|ADY67019.1| alanine racemase [Agrobacterium sp. H13-3] Length = 362 Score = 45.2 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 24/83 (28%), Gaps = 5/83 (6%) Query: 14 ENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 E L+ + TP + N + DG +K + A+ K Sbjct: 8 EGTPLDAI----STPMPVIDEDRLAANIARAQSYLDGHGMAFRPHIKTHKIPAIAKQQLQ 63 Query: 74 LGS-GLDIVSEGELRRALAAPVP 95 G+ G++ E A Sbjct: 64 AGAIGINCQKVSEAEVFADAGFD 86 >gi|302406558|ref|XP_003001115.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261360373|gb|EEY22801.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 392 Score = 45.2 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 21/75 (28%), Gaps = 6/75 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M + S+ L TP S +E+N + D + +K Sbjct: 1 MDY-SLQNHDSYIGQ-SVTDL----PTPALVISKRIVERNIAQLNRDVDAVGVAFRPHVK 54 Query: 61 ANSNQAVIKTLAHLG 75 + + + G Sbjct: 55 TLKCLEITRMMLRHG 69 >gi|6715492|gb|AAF26435.1| arginine decarboxylase [Brassica juncea] Length = 680 Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 23/110 (20%) Query: 15 NVSLEKLAHVV----QT-------PFYCYSTTAIEKNYLTFSNAFD--------GMDTMV 55 ++ L KL V QT P ++ +AFD Sbjct: 73 DIDLLKLVKKVTDPKQTGGLGLHLPVIVRFPDVLKNRLECLQSAFDFAVQSQGYESHYQG 132 Query: 56 CYALKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVF 101 Y +K N ++ V++ + GS GL+ S+ E+ A++ F Sbjct: 133 VYPVKCNQDRFVVEDIVRFGSQFRFGLEAGSKPEILLAMSCLCKGNNEAF 182 >gi|75343523|sp|O82872|DTA_ARTSP RecName: Full=D-threonine aldolase gi|3299792|dbj|BAA31547.1| metal-activated pyridoxal enzyme [Arthrobacter sp.] Length = 379 Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 18/64 (28%), Gaps = 1/64 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 V TP E N D D + KA+ + LG+ G+ Sbjct: 22 ARVDTPSLVLDLAPFEANLRAMQAWADRHDVALRPHAKAHKCPEIALRQLALGARGICCQ 81 Query: 82 SEGE 85 E Sbjct: 82 KVSE 85 >gi|254720286|ref|ZP_05182097.1| metal-activated pyridoxal protein [Brucella sp. 83/13] gi|265985304|ref|ZP_06098039.1| alanine racemase domain-containing protein [Brucella sp. 83/13] gi|306839821|ref|ZP_07472620.1| metal-activated pyridoxal protein [Brucella sp. NF 2653] gi|264663896|gb|EEZ34157.1| alanine racemase domain-containing protein [Brucella sp. 83/13] gi|306405097|gb|EFM61377.1| metal-activated pyridoxal protein [Brucella sp. NF 2653] Length = 355 Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 19/70 (27%), Gaps = 1/70 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP + N D + +K + + + G+ G+ Sbjct: 10 EVDTPAILVDVDRVVANIEKAQARADAAGVKLRPHIKTHKSPFFARMQVKAGAVGITCQK 69 Query: 83 EGELRRALAA 92 GE A Sbjct: 70 LGEAEVMADA 79 >gi|73973286|ref|XP_852691.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Canis familiaris] Length = 194 Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRR 88 FY I K +L A + YA K N N+ ++KTLA +G+ D ++ +++ Sbjct: 42 FYVTDPRDILKKHLRCLKALPRLIA--FYAAKCNDNRTMVKTLAAIGTVFDFANKTKMQL 99 Query: 89 ALAAPVPAERIV 100 A+ E + Sbjct: 100 QQASFGAEELYI 111 >gi|126277452|ref|XP_001375969.1| PREDICTED: similar to mKIAA1781 protein [Monodelphis domestica] Length = 1236 Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 24/273 (8%), Positives = 44/273 (16%), Gaps = 4/273 (1%) Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ-SGIYCFNVESESELKTLNQRA 137 E E + V + N+ Sbjct: 195 CCPGYYENGDVCIPLCTEECVHGHCVSPDTCHCEPGWGGIDCSSGCDSDHWGPHCSNRCQ 254 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG---VKIS 194 G + + + G + A+ P + Sbjct: 255 CQNGALCNPITGACVCADGYRGWRCEEFCEPGTHGKGCQLPCQCHNGATCDPRTGECHCA 314 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + H A LR Q + H G + PP + Sbjct: 315 PGYTGVYCEEQCPPGSHGAHCDLRCPCQNGGTCHHITGECACPPGWTGGVCAQPCPPGTF 374 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + + A + + N Sbjct: 375 GINCSQNCPCHHGGQCDHVTGRCHCAAGYMGDRCQEECPIGTFGFQCSQRCDCHNGAQCS 434 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 A P + GP C Sbjct: 435 PATGACVCDPGYKGPRCQERLCPEGLHGPQCTN 467 >gi|220928548|ref|YP_002505457.1| arginine decarboxylase [Clostridium cellulolyticum H10] gi|219998876|gb|ACL75477.1| arginine decarboxylase [Clostridium cellulolyticum H10] Length = 639 Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 88/242 (36%), Gaps = 16/242 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANSNQAVIKTLAHLG---- 75 P ++ +N+F+ + Y +K N Q V++ + G Sbjct: 67 PVLLRFENLLDSQISFLNNSFNEAMHKLNYKGAYRGVYPIKVNQQQQVVEEVTRFGQRYH 126 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID----LALQSGIYCFNVESESELK 131 GL++ S+ EL AL+ E + K + +D F +E EL Sbjct: 127 HGLEVGSKAELVAALSVMKDKEACLICNGYKDEEFVDLGLYSVKMGFKCFFVIEIPGELD 186 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + +R+ +LG K I R+ A H S G + I + + Sbjct: 187 IVLERSRALGVKPNIGIRIKLSAKAGGHWTESGGDRSIFGLNMSQVISMVDRLKAEGMLD 246 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + H+GSQI I A + +L G + ++D+GGGL + Y + Sbjct: 247 SLKLLHYHLGSQIPNIRDIRSAVLEAARVYAELVKEGAPMGYLDLGGGLAVDYDGSNTNY 306 Query: 252 SS 253 ++ Sbjct: 307 TN 308 >gi|254472752|ref|ZP_05086151.1| alanine racemase domain protein [Pseudovibrio sp. JE062] gi|211958216|gb|EEA93417.1| alanine racemase domain protein [Pseudovibrio sp. JE062] Length = 383 Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 22/79 (27%), Gaps = 8/79 (10%) Query: 15 NVSLEKL----AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 + L VQTP A + N + K + + + K Sbjct: 11 GYDIPALPGMKIEDVQTPALIVDLDAFDHNLFKMRDEIARYGVRHRAHCKMHKSAEIAKL 70 Query: 71 LAHLG--SGLDI--VSEGE 85 G G+ VSE E Sbjct: 71 QMEQGHACGVCCQKVSEAE 89 >gi|291220866|ref|XP_002730436.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 357 Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 2/70 (2%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAVIKTLAHLGS-GLD 79 + TP +E+N + + K++ A+ + G+ G+ Sbjct: 23 VEDIDTPALVVDLDKMERNMDKMTEFMKEFPSCKLRPHAKSHKCPAIARMQIQRGAVGVC 82 Query: 80 IVSEGELRRA 89 + E Sbjct: 83 VQKVTEAEAM 92 >gi|293602765|ref|ZP_06685205.1| threonine aldolase [Achromobacter piechaudii ATCC 43553] gi|292818781|gb|EFF77822.1| threonine aldolase [Achromobacter piechaudii ATCC 43553] Length = 379 Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 20/62 (32%), Gaps = 1/62 (1%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSE 83 V TP T E N D + + KA+ + + LG+ G+ Sbjct: 24 VDTPSLVLDLTPFEANLRAMQAWADRHEVALRPHAKAHKCPEIARRQLALGARGICCQKV 83 Query: 84 GE 85 E Sbjct: 84 SE 85 >gi|312883710|ref|ZP_07743433.1| alanine racemase domain-containing protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309368627|gb|EFP96156.1| alanine racemase domain-containing protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 368 Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 1/67 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 + TP + +N T + + M+ KA+ + + + G+ G+ + Sbjct: 5 QLDTPALLVDLDKMNQNIETMQQRINDLGLMLRPHTKAHKSPIIAQRQIDAGAKGICVAK 64 Query: 83 EGELRRA 89 GE Sbjct: 65 LGEAEVM 71 >gi|94985871|ref|YP_605235.1| arginine decarboxylase [Deinococcus geothermalis DSM 11300] gi|94556152|gb|ABF46066.1| arginine decarboxylase [Deinococcus geothermalis DSM 11300] Length = 706 Score = 45.2 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 24/141 (17%) Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET---GDFIALNRK 356 I + ++ + ++ +R IV C++ + R Sbjct: 526 DKYICNFSLFQSLPDNWAIQALFPIVPLDRLNERPTRQGTIVDITCDSDGKIEKFIDLRD 585 Query: 357 ----IALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE--IMVN-GSQFHI---IR- 402 + L PGD L + GAY V +N + E + V G +FHI +R Sbjct: 586 VKATLPLHEPGDRPYYLGVFLMGAYQDVLGSAHNLFGKVNEAHVTVRPGGKFHIDLFVRG 645 Query: 403 ---PR--MT--FQELIELDSI 416 R + ++E++ DSI Sbjct: 646 QKARRMIESMGYEEIMLRDSI 666 >gi|304392911|ref|ZP_07374842.1| alanine racemase domain-containing protein [Ahrensia sp. R2A130] gi|303294909|gb|EFL89278.1| alanine racemase domain-containing protein [Ahrensia sp. R2A130] Length = 387 Score = 45.2 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 8/76 (10%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + + +A TP A+E+N + K + + V K L Sbjct: 21 GMDEKDIA----TPCLVLDLDALERNVKKMGDYAKAHGMRHRSHGKMHKSVDVQKLQEEL 76 Query: 75 G--SGLDI--VSEGEL 86 G G+ VSE E+ Sbjct: 77 GGSCGVCCQKVSEAEV 92 >gi|239614906|gb|EEQ91893.1| adhesin WI-1 [Ajellomyces dermatitidis ER-3] Length = 1171 Score = 45.2 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 12/248 (4%), Positives = 36/248 (14%), Gaps = 8/248 (3%) Query: 106 KTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 + + + + + ++ + D Sbjct: 557 WELWNKWCKDPYNCEWDSSHEKYDWELWDKWCKDPYNCEWDSSHEKYDWELWDKWCKDFY 616 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 E + + ++ ++ Sbjct: 617 NCEWDSSHEKYDWELWDKWCKDSYNCDWDKFHEKYDWELWDKWCKDSYNCDWDKFHEKYD 676 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA------SLIHQYFGNLQCKIILEPGRFL 279 + N D +H + + + F Sbjct: 677 WDLWNKWCKDSYNCDWDKFHEKYDWELWDKWCKDSYNCDWDKFHEKYDWKLWDKWCKDFY 736 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 + K + + N D+ H D Sbjct: 737 NCEWDSSHEKYDWELWDKWCKDPYNCEWDSSHEKYDWELWDKWCKDFYNCDWDKFHEKYD 796 Query: 340 --IVGPIC 345 + C Sbjct: 797 WDLWNKWC 804 Score = 44.8 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 11/248 (4%), Positives = 36/248 (14%), Gaps = 8/248 (3%) Query: 106 KTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 + + + + + ++ + D + Sbjct: 437 WDLWNKWCKDPYNCDWDSSHEKYDWELWDKWCKDPYNCDWDSSHEKYDWDLWNKWCKDPY 496 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 E + + L + ++ ++ Sbjct: 497 NCEWDSSHEKYDWELWDKWCKDLYNCEWDSSHEKYDWKLWDKWCKDSYNCDWDKFHEKYD 556 Query: 226 S-----NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL-EPGRFL 279 + + + Y ++ F Sbjct: 557 WELWNKWCKDPYNCEWDSSHEKYDWELWDKWCKDPYNCEWDSSHEKYDWELWDKWCKDFY 616 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 + K + N D+ H D Sbjct: 617 NCEWDSSHEKYDWELWDKWCKDSYNCDWDKFHEKYDWELWDKWCKDSYNCDWDKFHEKYD 676 Query: 340 --IVGPIC 345 + C Sbjct: 677 WDLWNKWC 684 Score = 43.7 bits (101), Expect = 0.054, Method: Composition-based stats. Identities = 17/275 (6%), Positives = 43/275 (15%), Gaps = 13/275 (4%) Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLA-LQSGIYCFNVESESELKTLNQRAVSLGK 142 G R + + + + + + N+ Sbjct: 170 GHGRHFYDCKWDNDHEKYDWPLWQYWCGSHDKDPYNCEWDSSHEKYDWELWNKWCKDPYN 229 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 + D E + + + Sbjct: 230 CEWDSSHEKYDWELWNKWCKDPYNCEWDSSHEKYDWELWNKWCKDSYNCEWDSSHEKYDW 289 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + ++ N D + H S + + + Sbjct: 290 GLWNKWCKDFYNCEWDSSHEKYDWGLWNKWCKDPYNCDWDSSHEKFDWGLWSHWCNDYDK 349 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM---------- 312 Y N + + + ++ K D + + F Sbjct: 350 YPYNCEWDSSHKEYDLTLWNLWCSSYDKDPYKCDWDLWNQLCSGNGHHFYDCDWDVSYPG 409 Query: 313 --RPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 Y D+ C Sbjct: 410 YDSHLWDLLCTNNPYNCEWDSSHEKYDWDLWNKWC 444 Score = 37.5 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 21/262 (8%), Positives = 44/262 (16%), Gaps = 10/262 (3%) Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 EL S + + + C S + Sbjct: 241 WELWNKWCKDPYNCEWDSSHEKYDWELWNKWCKDSYNCEWDSSHEKYDWGLWNKWCKDFY 300 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + + K + + K S Sbjct: 301 NCEWDSSHEKYDWGLWNKWCKDPYNCDWDSSHEKFDWGLWSHWCNDYDKYPYNCEWDSSH 360 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + + + D Q G D P + + Sbjct: 361 KEYDLTLWNLWCSSYDKDPYKCDWDLWNQLCSGNGHHFYDCDWDVSYPGYDSHLWDLLCT 420 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 C+ D K + + ++ L+D + + Sbjct: 421 NNPYNCEW----------DSSHEKYDWDLWNKWCKDPYNCDWDSSHEKYDWELWDKWCKD 470 Query: 324 NYIVNPAGDRLHIHADIVGPIC 345 Y + D+ C Sbjct: 471 PYNCDWDSSHEKYDWDLWNKWC 492 >gi|158145259|gb|ABW21861.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 45.2 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 94/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 + S+ EL A+++ E ++ K + I LAL + N E E E Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLKESGM 245 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI E + +L G ++ ID+GGGLGI Y Sbjct: 246 FDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYDGTKS 305 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + Y + + R V I Sbjct: 306 SDSDVSVGYGLQDYASTVVQAVRFVCDRKNVKHPVIC 342 >gi|225389333|ref|ZP_03759057.1| hypothetical protein CLOSTASPAR_03080 [Clostridium asparagiforme DSM 15981] gi|225044601|gb|EEG54847.1| hypothetical protein CLOSTASPAR_03080 [Clostridium asparagiforme DSM 15981] Length = 115 Score = 45.2 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 19/70 (27%), Gaps = 1/70 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 + TP + N D + K + + LG+ G+ + Sbjct: 5 ELDTPALIIDREIMMDNLRFMQEYADRRHVALRPHTKTHKMPRLALIQEELGARGVTVAK 64 Query: 83 EGELRRALAA 92 GE A Sbjct: 65 VGEAEVMAEA 74 >gi|157691761|ref|YP_001486223.1| alanine racemase [Bacillus pumilus SAFR-032] gi|157680519|gb|ABV61663.1| possible alanine racemase [Bacillus pumilus SAFR-032] Length = 368 Score = 45.2 bits (105), Expect = 0.023, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 1/68 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 + TP + +N + D + K + + K +G+ GL + Sbjct: 4 DELDTPALLIDKQVMMENLIAMQQYADRQQVKLRPHTKTHKTPGLAKMQEEMGASGLTVA 63 Query: 82 SEGELRRA 89 GE Sbjct: 64 KVGEAEVM 71 >gi|260576176|ref|ZP_05844169.1| alanine racemase domain protein [Rhodobacter sp. SW2] gi|259021656|gb|EEW24959.1| alanine racemase domain protein [Rhodobacter sp. SW2] Length = 372 Score = 45.2 bits (105), Expect = 0.023, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 3/66 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDI- 80 VQTP A+E N + + D + K + + + + G G+ Sbjct: 19 AEVQTPSLILDLDALEANIASMQSQADAAGVRLRVHGKMHKSAEIAQMQIAAGACGICCQ 78 Query: 81 -VSEGE 85 VSE E Sbjct: 79 KVSEAE 84 >gi|115466192|ref|NP_001056695.1| Os06g0131300 [Oryza sativa Japonica Group] gi|12229999|sp|Q9SNN0|SPE1_ORYSJ RecName: Full=Arginine decarboxylase 1; Short=ARGDC1; Short=OsADC1 gi|6006369|dbj|BAA84799.1| arginine decarboxylase [Oryza sativa Japonica Group] gi|47716667|gb|AAT37534.1| arginine decarboxylase [Oryza sativa] gi|113594735|dbj|BAF18609.1| Os06g0131300 [Oryza sativa Japonica Group] gi|125553918|gb|EAY99523.1| hypothetical protein OsI_21492 [Oryza sativa Indica Group] Length = 702 Score = 45.2 bits (105), Expect = 0.023, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 97/275 (35%), Gaps = 19/275 (6%) Query: 31 CYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLG----SGL 78 + + AFD G Y +K N ++ V++ + G GL Sbjct: 114 VRFPDVLRHRVEALNAAFDYAVRSTGYGGRYQGVYPVKCNQDRHVVEDIVEFGEPFRFGL 173 Query: 79 DIVSEGEL---RRALAAPVPAERIVFSGVGKTIDEID---LALQSGIYCFNVESESELKT 132 + S+ EL LAA + ++ K + + +A G+ V + E Sbjct: 174 EAGSKPELLLAMSCLAARGNPDALLICNGYKDDEYVSLALIARTMGLNTVIVLEQEEELD 233 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + A P+ + ST ++ KFG+ QI S+ A TL + Sbjct: 234 IVVDASRRLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNAAQILSVVAKLKTLGMLD 293 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI + +L G ++ IDVGGGLGI Y H Sbjct: 294 CLQLLHFHIGSQIPTTALLGDGVGEAAQIYCELARLGAAMRVIDVGGGLGIDYDGSHSAQ 353 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 + A + +Y + + R VA I Sbjct: 354 TDMSVAYSLEEYAAAVVAAVGRVCDRKGVAHPIIC 388 >gi|118590603|ref|ZP_01548004.1| threonine aldolase, low-specificity [Stappia aggregata IAM 12614] gi|118436579|gb|EAV43219.1| threonine aldolase, low-specificity [Stappia aggregata IAM 12614] Length = 387 Score = 44.8 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V K LG G+ Sbjct: 25 ADIQTPCLVLDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVAKLQERLGGAVGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|332143282|ref|YP_004429020.1| arginine decarboxylase [Alteromonas macleodii str. 'Deep ecotype'] gi|327553304|gb|AEB00023.1| arginine decarboxylase [Alteromonas macleodii str. 'Deep ecotype'] Length = 639 Score = 44.8 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 68/311 (21%), Positives = 114/311 (36%), Gaps = 32/311 (10%) Query: 18 LEKLAHV-VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVI 68 +E + VQ P + + AF Y +K N + V+ Sbjct: 53 IEDIRKEGVQFPVVVRFHDILRSQVAGLNKAFRHAIEEAEYQGQYQGVYPVKVNQMREVV 112 Query: 69 KTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIY 120 + + G GL+ S+ EL LA E + K + + LA Sbjct: 113 EEIVDAGKPYNYGLEAGSKAELLTVLAMNTNEESLTILNGYKDDEVMRLALLGRKLGRRV 172 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 VE +EL L + A LG + I R + K S+G + KFG+ I +I + Sbjct: 173 VVVVEKFTELLLLVKTAKELGIEPIIGVRSKMTVKGRG-KWESSGGERAKFGLTITEIIN 231 Query: 181 LYAYASTLPG-VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 Y + + HIGSQ+ I + +A + L G + ++DVGGG Sbjct: 232 AARYLEEQGMAHCLKLLHFHIGSQLTDIRAVKEAVTEGARIYADLHKMGFALDYVDVGGG 291 Query: 240 LGIAYHSDH------RPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGIL 286 LGI Y + R S +Y + + + ++ E GR + A + Sbjct: 292 LGIDYDGSNSTNESSRNYSMQEYVADVVYGMKEMCDLEGVPHPHLVSESGRAITAHHSCV 351 Query: 287 VTKVISIKKSA 297 +T+++ K+ Sbjct: 352 ITEIVGEIKTN 362 >gi|103488650|ref|YP_618211.1| threonine aldolase family protein [Sphingopyxis alaskensis RB2256] gi|98978727|gb|ABF54878.1| threonine aldolase family protein [Sphingopyxis alaskensis RB2256] Length = 381 Score = 44.8 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 20/62 (32%), Gaps = 1/62 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP A+++N + + K + + + + G+ G+ GE Sbjct: 23 TPVLILDREALDRNIARMAALTKAAGVALRPHAKTHKSVDIARRQLDAGAVGVCCAKIGE 82 Query: 86 LR 87 Sbjct: 83 AE 84 >gi|326317869|ref|YP_004235541.1| alanine racemase domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374705|gb|ADX46974.1| alanine racemase domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 377 Score = 44.8 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 1/70 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 + TP T +E+N + M K V++ G+ G+ + + Sbjct: 6 ELGTPSALIDTQRMERNIRRMQDRMQAMGVRFRPHAKTTKCLPVVQAQIAAGAQGITVST 65 Query: 83 EGELRRALAA 92 E + A Sbjct: 66 LKEAEQFFEA 75 >gi|170745477|ref|YP_001766934.1| alanine racemase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170659078|gb|ACB28132.1| alanine racemase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 392 Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E N + K + + ++K LG G+ Sbjct: 30 DEIQTPCLILDLDALEGNIRKMGDYARAHGMRHRAHGKMHKSVDILKLQQSLGGACGVCC 89 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 90 QKVSEAEV 97 >gi|260814894|ref|XP_002602148.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae] gi|229287455|gb|EEN58160.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae] Length = 215 Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 15/213 (7%), Positives = 34/213 (15%) Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 + + + + + I H Sbjct: 1 IFTCIYWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWG 60 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 IH + + L +H I + + + H Sbjct: 61 IFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWG 120 Query: 234 IDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISI 293 I + S D L++ Y+ + Sbjct: 121 IFTCIHWWWWIFTCLHWCSRGDLHMLLNIYWCWGIFTCVHWCWGIFTCIHWWWWIFTCLH 180 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 T V + + + Sbjct: 181 WCWGIFTCVHWCWGIFTCIHWWWWIFTCLHWCW 213 Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 9/212 (4%), Positives = 32/212 (15%), Gaps = 2/212 (0%) Query: 93 PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 + +F+ + + + T + Sbjct: 4 CIYWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWC--WGI 61 Query: 153 DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK 212 + I T + + + Sbjct: 62 FTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGI 121 Query: 213 AFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKII 272 + + + + + + + + IH ++ C Sbjct: 122 FTCIHWWWWIFTCLHWCSRGDLHMLLNIYWCWGIFTCVHWCWGIFTCIHWWWWIFTCLHW 181 Query: 273 LEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 V + T + Sbjct: 182 CWGIFTCVHWCWGIFTCIHWWWWIFTCLHWCW 213 Score = 37.5 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 15/202 (7%), Positives = 35/202 (17%), Gaps = 4/202 (1%) Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + I H IH + + L Sbjct: 4 CIYWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFT 63 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +H I + H G I + + Sbjct: 64 CIHWWWWIFTCLHWCWGIFTCIHWW----WWIFTCLHWCWGIFTCIHWWWWIFTCLHWCW 119 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 ++ + R + + + + + ++ L Sbjct: 120 GIFTCIHWWWWIFTCLHWCSRGDLHMLLNIYWCWGIFTCVHWCWGIFTCIHWWWWIFTCL 179 Query: 317 YDAYHEINYIVNPAGDRLHIHA 338 + + + G IH Sbjct: 180 HWCWGIFTCVHWCWGIFTCIHW 201 >gi|158145229|gb|ABW21846.1| putative arginine decarboxylase [Solanum chilense] gi|158145237|gb|ABW21850.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N + V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDLFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|15982891|gb|AAL09792.1| AT4g34710/T4L20_290 [Arabidopsis thaliana] Length = 711 Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 97/301 (32%), Gaps = 29/301 (9%) Query: 15 NVSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMV 55 ++ L K+ V Q P ++ +AFD Sbjct: 83 DIDLLKIVKKVTGPKSSGGLGLQLPLIVRFPDVLKNRLECLQSAFDYAIKSQGYDSHYQG 142 Query: 56 CYALKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVF-SGVGKTIDE 110 Y +K ++ V++ + GS GL+ S+ E+ A++ F G E Sbjct: 143 VYPVKCXQDRFVVEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFKDAE 202 Query: 111 IDLALQSG-----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTG 165 G +E E EL + + + + + I R + H ++G Sbjct: 203 YISLALLGRKLALNTVIVLEQEEELDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGSTSG 262 Query: 166 KKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 +K + + + + + HIGSQI L +L Sbjct: 263 EKGKFGLTTTQIVRVVRKLRQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELV 322 Query: 226 SNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGI 285 G +++ ID+GGGLGI Y S A + +Y + + + R V I Sbjct: 323 RLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYAEAVVASVRVVCDRSSVKHPVI 382 Query: 286 L 286 Sbjct: 383 C 383 >gi|319761308|ref|YP_004125245.1| alanine racemase domain protein [Alicycliphilus denitrificans BC] gi|330823182|ref|YP_004386485.1| alanine racemase domain-containing protein [Alicycliphilus denitrificans K601] gi|317115869|gb|ADU98357.1| alanine racemase domain protein [Alicycliphilus denitrificans BC] gi|329308554|gb|AEB82969.1| alanine racemase domain protein [Alicycliphilus denitrificans K601] Length = 387 Score = 44.8 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 3/67 (4%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 A + TP A+E+N + K + + A+ L G+ V Sbjct: 14 ADQIDTPAAVIDLDAMERNIQRMAAFARQNQVRWRPHAKMHKSAAIALLLEQAGACGHCV 73 Query: 82 ---SEGE 85 SE E Sbjct: 74 QKTSEAE 80 >gi|317127511|ref|YP_004093793.1| alanine racemase domain protein [Bacillus cellulosilyticus DSM 2522] gi|315472459|gb|ADU29062.1| alanine racemase domain protein [Bacillus cellulosilyticus DSM 2522] Length = 367 Score = 44.8 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 2/66 (3%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 ++TP + KN + K + + + K G+ G+ + Sbjct: 5 EEIETPALILDEKKLNKNIDRMMKV-SEHGVTIRPHFKTHKSVWIAKRQIEKGASGITVA 63 Query: 82 SEGELR 87 + E Sbjct: 64 TASEAE 69 >gi|146275923|ref|YP_001166083.1| alanine racemase domain-containing protein [Novosphingobium aromaticivorans DSM 12444] gi|145322614|gb|ABP64557.1| alanine racemase domain protein [Novosphingobium aromaticivorans DSM 12444] Length = 393 Score = 44.8 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 5/78 (6%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 V L L +TP +++N + G+ + LK + V + + Sbjct: 17 VRLGDL----ETPCLVLDADRMDRNIARLRDRIAGLGVTLRPHLKTAKSVEVARRVMATS 72 Query: 76 SG-LDIVSEGELRRALAA 92 G + + E A Sbjct: 73 EGPATVSTLKEAEFFADA 90 >gi|163760387|ref|ZP_02167469.1| alanine racemase-like protein [Hoeflea phototrophica DFL-43] gi|162282338|gb|EDQ32627.1| alanine racemase-like protein [Hoeflea phototrophica DFL-43] Length = 387 Score = 44.8 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 24/66 (36%), Gaps = 4/66 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI- 80 +QTP A+E+N + M K + + V K LG G+ Sbjct: 26 EIQTPCLVLDLDALERNIIKMGEQAKSMGVRHRVHGKMHKSVDVAKLQERLGGAVGVCCQ 85 Query: 81 -VSEGE 85 VSE E Sbjct: 86 KVSEAE 91 >gi|126668086|ref|ZP_01739049.1| putative D-b-hydroxy-aspartate aldolase [Marinobacter sp. ELB17] gi|126627477|gb|EAZ98111.1| putative D-b-hydroxy-aspartate aldolase [Marinobacter sp. ELB17] Length = 387 Score = 44.8 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 21/71 (29%), Gaps = 2/71 (2%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDIV 81 +QTP A+E+N + K + + V + LG G+ Sbjct: 26 EIQTPCLILDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVARLQEDLGGAIGVCCQ 85 Query: 82 SEGELRRALAA 92 E A Sbjct: 86 KPSEAEVFARA 96 >gi|324503634|gb|ADY41575.1| Ornithine decarboxylase [Ascaris suum] Length = 344 Score = 44.8 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 67/209 (32%), Gaps = 25/209 (11%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 K+ G+ IG+ + + A L S GH++ +D+GGG + Sbjct: 53 KVVGISFSIGAGACSLGIYAYAIAQACRLFGVAASLGHDLCVLDIGGGFPCGSPTRGPSF 112 Query: 252 SSSDYA-----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA--------- 297 S +II EPGR+ A V L+T +I + Sbjct: 113 SQVAATISASLDEYFPESSFGHVRIIAEPGRYFAASVFSLITNIIDKRAVDASVVTNDVF 172 Query: 298 --------DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG- 348 +T + + + V+ + +A I+GP + Sbjct: 173 DSGTAGFVYQTNEGFFGSFGCRLTAFCEPKCRPLVECVHDVSADNYTYATILGPT-LSNN 231 Query: 349 -DFIALNRKIALPRPGDLLYIEKTGAYGA 376 D + ++ + G+ L + GAY Sbjct: 232 VDIVQPVARLPQMQIGEWLLWDDMGAYSM 260 >gi|158145207|gb|ABW21835.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 44.8 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 94/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 + S+ EL A+++ E +V K + I LAL + N E E E Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLVVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLKESGM 245 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI E + +L G ++ ID+GGGLGI Y Sbjct: 246 LDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYDGTKS 305 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + Y + + R V I Sbjct: 306 SDSDVSVGYGLQDYASTVVQAVRFVCDRKNVKHPVIC 342 >gi|159043441|ref|YP_001532235.1| alanine racemase domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911201|gb|ABV92634.1| alanine racemase domain protein [Dinoroseobacter shibae DFL 12] Length = 387 Score = 44.8 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 4/67 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + N M K + + V K LG G+ Sbjct: 25 ADIQTPCLVVDLDALERNVVKMGNFAKEMGVRHRVHGKMHKSVDVAKLQMELGGACGVCC 84 Query: 81 --VSEGE 85 VSE E Sbjct: 85 QKVSEAE 91 >gi|119487158|ref|XP_001262434.1| hypothetical protein NFIA_029690 [Neosartorya fischeri NRRL 181] gi|119410591|gb|EAW20537.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] Length = 394 Score = 44.8 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 8/89 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F + L TP S +E+N + +K Sbjct: 1 MD-FSLENHKSFI-GLPATDL----PTPALVLSKPILERNIKQLLQDVKDLGISFRPHVK 54 Query: 61 ANSNQAVIKTLAHLGSG--LDIVSEGELR 87 + V + + G+ + + E+R Sbjct: 55 TLKSIEVTRMMLDNGTHRRIVASTLCEIR 83 >gi|126733774|ref|ZP_01749521.1| threonine aldolase [Roseobacter sp. CCS2] gi|126716640|gb|EBA13504.1| threonine aldolase [Roseobacter sp. CCS2] Length = 387 Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 10/94 (10%) Query: 1 MSAFKYFEGSLHAENVSLEKLA----HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVC 56 M+ + L + L +QTP A+E+N + Sbjct: 1 MNDMSNLKN-LEV-GYDVPALPGMDEADIQTPCLVLDLDALERNIKKMGDFAKSHGMRHR 58 Query: 57 YALKANSNQAVIKTLAHLG--SGLDI--VSEGEL 86 K + + V LG G+ VSE E+ Sbjct: 59 VHGKMHKSVDVALLQEKLGGSVGVCCQKVSEAEV 92 >gi|317455968|gb|ADV29076.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 94/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 + S+ EL A+++ E ++ K + I LAL + N E E E Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSECLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLKESGM 245 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI + + +L G ++ ID+GGGLGI Y Sbjct: 246 LDCLQLLHFHIGSQIPSTDLLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYDGTKS 305 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + Y + + R V I Sbjct: 306 SDSDVSVGYGLQDYASTVVQAVRFVCDRKNVKHPVIC 342 >gi|317051330|ref|YP_004112446.1| arginine decarboxylase [Desulfurispirillum indicum S5] gi|316946414|gb|ADU65890.1| arginine decarboxylase [Desulfurispirillum indicum S5] Length = 624 Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 18/235 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMD--------TMVCYALKANSNQAVIKTLAHLG--- 75 TPF I + F AF + +K N N+ I+ L H G Sbjct: 57 TPFIIRFPFLIGEQIKKFYRAFQHAKEEFNYKGEHKAVFPIKVNQNRHFIERLLHYGKDF 116 Query: 76 -SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIYCFNVESESEL 130 GL+ S+ EL L + +P ++ K + +DLA C +ES EL Sbjct: 117 SYGLEAGSKAELFAVLISDIPENALITCNGFKDREFLDLAVIGKQLGKDICVIIESVEEL 176 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP- 189 L I FR+ + + K + + KFG+ +I Sbjct: 177 VGLIDIYRRAETIPDIGFRIKL-SSRGSGKWEKSSGEGAKFGLSSTEILLAIDLLKEHDL 235 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAY 244 +++ + HIGSQI + + +A + + ++ G NI+++++GGG+G+ Y Sbjct: 236 LDRVNLLHFHIGSQITNVRTMKRAIREAGVIFAEVAKLGLNIKYLNIGGGIGVDY 290 >gi|332308197|ref|YP_004436048.1| arginine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175526|gb|AEE24780.1| arginine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 640 Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 101/299 (33%), Gaps = 29/299 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGS--- 76 P + + F M Y +K N + V++ + G+ Sbjct: 64 PVVVRFHDILRSQVACLNQTFIDTIEEAQYQGKYMGVYPVKVNQMREVVEEIVDAGAPFN 123 Query: 77 -GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIYCFNVESESELK 131 GL+ S+ EL +A + + K + + LA +E SEL Sbjct: 124 YGLEAGSKAELITVMAYNTNIDSLTILNGYKDAEFMRLALLGRKLGRKMIVVIEKYSELG 183 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 L A L I FR + + S G + I + S G Sbjct: 184 LLVDAAKQLNVMPIIGFRSKMTVKGRGKWESSGGDRAKFGLTTSEMICAARYLESQGMGE 243 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH--- 248 + + HIGSQ+ I + +A + ++ G ++++DVGGGLGI Y Sbjct: 244 CLKLLHFHIGSQLTDIRAVKEAISEGGRIYAEMHRMGFKLEYVDVGGGLGIDYDGSQSTN 303 Query: 249 ---RPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 R + +Y + G ++ E GR + A +V +V+ ++ Sbjct: 304 DSSRNYTMEEYVADVVYGMREVCDLEGVPHPTLVSESGRAITAHHSCVVAQVVGEIRAN 362 Score = 40.6 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 15/130 (11%), Positives = 42/130 (32%), Gaps = 18/130 (13%) Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET---GDFIALNR-- 355 + + ++ T + ++ ++ +V C++ D ++ Sbjct: 460 QYLCNFSVFQSAADTWAIDQVLPVVPIARMNEKPTVNCSLVDITCDSDGKLDQFVVDHGI 519 Query: 356 ----KIALPRPGD--LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ-------FHIIR 402 + + G+ L + TGAY V +N + E+ + G + Sbjct: 520 SDVLPMPPLKKGEDYYLGLFLTGAYQDVMGDMHNLFGRLNEVHIFGDDDDPEDFYIEEMV 579 Query: 403 PRMTFQELIE 412 + Q+++ Sbjct: 580 KGSSVQDVLS 589 >gi|144899973|emb|CAM76837.1| ornithine decarboxylase [Magnetospirillum gryphiswaldense MSR-1] Length = 306 Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats. Identities = 60/225 (26%), Positives = 88/225 (39%), Gaps = 17/225 (7%) Query: 70 TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE 129 L LGS D+ S GE+ L A+ I F K +I A G+ + +SE+E Sbjct: 1 MLVGLGSSFDVASRGEVDLCLENGARADNISFGNTIKKQSDIAYAYSKGVRLYAFDSEAE 60 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L+ L + A I + KFG I L A L Sbjct: 61 LEKLAESAPGSRVFCRILMTCDGA----------EWPLSRKFGCEIEMAKDLLVKARELG 110 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + GV H+GSQ + + A L L G +++ +++GGG Y +D Sbjct: 111 -MDPYGVSFHVGSQQTDLNQWDIAVGKAAMLFTALNEAGIDLKMMNLGGGFPAKYRTD-- 167 Query: 250 PPSSSDYASLIHQYFGNLQ----CKIILEPGRFLVADVGILVTKV 290 P+ YA + N +I+EPGR LV D G+L +V Sbjct: 168 IPAVERYADAVMHAMTNHFGNALPAMIIEPGRSLVGDAGVLEAEV 212 >gi|261190778|ref|XP_002621798.1| adhesin WI-1 [Ajellomyces dermatitidis SLH14081] gi|239591221|gb|EEQ73802.1| adhesin WI-1 [Ajellomyces dermatitidis SLH14081] Length = 699 Score = 44.4 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 23/261 (8%), Positives = 45/261 (17%), Gaps = 11/261 (4%) Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + + D K K P Sbjct: 344 WNKWCNKDPYNCDWDPSHEKYDWDLWNKWCKDPYNCDWDPYHEKYDWDLWNKWCNKDPYN 403 Query: 148 FRVNPDINANTHKKISTGKKE-DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 +P + K+ + + + D + Sbjct: 404 CDWDPSHEKYDLSLWNKWCKDPYNCDWDPYHEKYDWDLWNKWCNKDPYNCDWDPSHEKYD 463 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 E ++K + + ++ P + D+ +Y + Sbjct: 464 WELWNKWCNKDPYNCDWDPYHEKYD--------WDLWNKWCNKDPYNCDWDPSHEKYDWD 515 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 L K + D K +K D Sbjct: 516 LWNKWCNKDPYNCDWDPYHEKYDWDLWNKWCNKDPYNCDWDPYHEKYDWDLWNKWCNKDP 575 Query: 327 VNPAGDRLHIHAD--IVGPIC 345 N D H D + C Sbjct: 576 YNCDWDPSHEKYDWDLWSKWC 596 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 15/249 (6%), Positives = 41/249 (16%), Gaps = 6/249 (2%) Query: 103 GVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKI 162 + + D + S + + + Sbjct: 273 NHWCSSYDKDPYKCDWGLWNGLCSGNGKHFYDCDWDDSHPGYDPHLWDILCTKDPYNCDW 332 Query: 163 STGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQ 222 ++ + + + P + D+ D + D Sbjct: 333 DPSHEKYDWELWNKWCNKDPYNCDWDPSHEKYDWDLWNKWCKDPYNCDWDPYHEKYDWDL 392 Query: 223 QLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVAD 282 + + + D S Y Y + + + Sbjct: 393 WNKWCNKDPYNCDWDPSHEKYDLSLWNKWCKDPYNCDWDPYHEKYDWDLWNKWCNKDPYN 452 Query: 283 VGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN------PAGDRLHI 336 + + +K + YD + Sbjct: 453 CDWDPSHEKYDWELWNKWCNKDPYNCDWDPYHEKYDWDLWNKWCNKDPYNCDWDPSHEKY 512 Query: 337 HADIVGPIC 345 D+ C Sbjct: 513 DWDLWNKWC 521 Score = 41.0 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 20/250 (8%), Positives = 48/250 (19%), Gaps = 4/250 (1%) Query: 100 VFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTH 159 + + D + +N + + + + D Sbjct: 322 LCTKDPYNCDWDPSHEKYDWELWNKWCNKDPYNCDWDPSHEKYDWDLWNKWCKDPYNCDW 381 Query: 160 KKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD 219 D + ++ + + +S + + + Sbjct: 382 DPYHEKYDWDLWNKWCNKDPYNCDWDPSHEKYDLSLWNKWCKDPYNCDWDPYHEKYDWDL 441 Query: 220 LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP--PSSSDYASLIHQYFGNLQCKIILEPGR 277 + + +N + P + D+ +Y +L K + Sbjct: 442 WNKWCNKDPYNCDWDPSHEKYDWELWNKWCNKDPYNCDWDPYHEKYDWDLWNKWCNKDPY 501 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIH 337 D K +K D N D H Sbjct: 502 NCDWDPSHEKYDWDLWNKWCNKDPYNCDWDPYHEKYDWDLWNKWCNKDPYNCDWDPYHEK 561 Query: 338 AD--IVGPIC 345 D + C Sbjct: 562 YDWDLWNKWC 571 >gi|52081132|ref|YP_079923.1| putative alanine racemase [Bacillus licheniformis ATCC 14580] gi|52786510|ref|YP_092339.1| hypothetical protein BLi02775 [Bacillus licheniformis ATCC 14580] gi|319644904|ref|ZP_07999137.1| hypothetical protein HMPREF1012_00170 [Bacillus sp. BT1B_CT2] gi|52004343|gb|AAU24285.1| putative alanine racemase [Bacillus licheniformis ATCC 14580] gi|52349012|gb|AAU41646.1| putative protein [Bacillus licheniformis ATCC 14580] gi|317392713|gb|EFV73507.1| hypothetical protein HMPREF1012_00170 [Bacillus sp. BT1B_CT2] Length = 368 Score = 44.4 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 1/67 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 + TP + N N + + K + + K +G+ G+ + Sbjct: 5 QLDTPALLIDKDVMLSNMKDMQNYANEQKVSLRPHTKTHKMPKLAKLQEEMGAVGIAVAK 64 Query: 83 EGELRRA 89 GE Sbjct: 65 VGEAEVM 71 >gi|254492362|ref|ZP_05105534.1| arginine decarboxylase [Methylophaga thiooxidans DMS010] gi|224462254|gb|EEF78531.1| arginine decarboxylase [Methylophaga thiooxydans DMS010] Length = 648 Score = 44.4 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 75/222 (33%), Gaps = 16/222 (7%) Query: 34 TTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGS----GLDIV 81 +++ + AF + +K N VI+ +A GS GL+ Sbjct: 82 ENLLDQRITQLNEAFAKAINEAGYNNHYRGVFPIKVNQQCHVIEEIADYGSRYHHGLEAG 141 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE----SELKTLNQRA 137 S+ EL AL E ++ K + I+L L + N EL + +R+ Sbjct: 142 SKAELIIALTQLKDPESLIICNGYKDEEFIELGLYARQMGINCFFVLETAMELDIILERS 201 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 +LG I R+ H +G + + + + + Sbjct: 202 RALGIDPLIGVRIRLASMVEGHWNEDSGDRSIFGLSTNALLGVIEKLKQADMLHCLQLLH 261 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 H+GSQI I + L G + +ID+GGG Sbjct: 262 SHLGSQIPNIRNIRSGVMEACRFYAGLIEEGAPMGYIDIGGG 303 >gi|158145247|gb|ABW21855.1| putative arginine decarboxylase [Solanum chilense] gi|158145261|gb|ABW21862.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 44.4 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 94/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 + S+ EL A+++ E ++ K + I LAL + N E E E Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGVLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLKESGM 245 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI E + +L G ++ ID+GGGLGI Y Sbjct: 246 LDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYDGTKS 305 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + Y + + R V I Sbjct: 306 SDSDVSVGYGLQDYASTVVQAVRFVCDRKNVKHPVIC 342 >gi|254467580|ref|ZP_05080989.1| threonine aldolase, low-specificity [Rhodobacterales bacterium Y4I] gi|206684328|gb|EDZ44812.1| threonine aldolase, low-specificity [Rhodobacterales bacterium Y4I] Length = 387 Score = 44.4 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V K LG G+ Sbjct: 25 ADIQTPALVLDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVAKLQEELGGAVGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|99082541|ref|YP_614695.1| D-3-hydroxyaspartate aldolase [Ruegeria sp. TM1040] gi|99038821|gb|ABF65433.1| D-3-hydroxyaspartate aldolase [Ruegeria sp. TM1040] Length = 387 Score = 44.4 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V K LG G+ Sbjct: 25 ADIQTPCLVLDLDALERNIKKMGDYARAHGMRHRVHGKMHKSVDVAKLQERLGGAIGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|213410262|ref|XP_002175901.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] gi|212003948|gb|EEB09608.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] Length = 408 Score = 44.4 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 7/68 (10%), Positives = 21/68 (30%), Gaps = 4/68 (5%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 +S+ ++ TP + ++ N + + + +K + + Sbjct: 25 GISIYEI----PTPAFVVDQKVVKNNCDEMLKSIEATGALFRPHVKTHKCIEAMDLQLQG 80 Query: 75 GSGLDIVS 82 +VS Sbjct: 81 RVNAVVVS 88 >gi|61967666|gb|AAX56855.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 44.4 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 94/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 + S+ EL A+++ E ++ K + I LAL + N E E E Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLKESGM 245 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI E + +L G ++ ID+GGGLGI Y Sbjct: 246 LDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYDGTKS 305 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + Y + + R V I Sbjct: 306 SDSDVSVGYGLQDYASTVVQAVRFVCNRKNVKHPVIC 342 >gi|61967668|gb|AAX56856.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 44.4 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 94/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDCAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 + S+ EL A+++ E ++ K + I LAL + N E E E Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLKESGM 245 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI E + +L G ++ ID+GGGLGI Y Sbjct: 246 LDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYDGTKS 305 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + Y + + R V I Sbjct: 306 SDSDVSVGYGLQDYASTVVQAVRFVCNRKNVKHPVIC 342 >gi|225686513|ref|YP_002734485.1| alanine racemase domain-containing protein [Brucella melitensis ATCC 23457] gi|256262349|ref|ZP_05464881.1| alanine racemase domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|225642618|gb|ACO02531.1| alanine racemase domain protein [Brucella melitensis ATCC 23457] gi|263092078|gb|EEZ16375.1| alanine racemase domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|326410894|gb|ADZ67958.1| alanine racemase domain-containing protein [Brucella melitensis M28] gi|326554185|gb|ADZ88824.1| alanine racemase domain-containing protein [Brucella melitensis M5-90] Length = 355 Score = 44.4 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 18/70 (25%), Gaps = 1/70 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP + N D + +K + + G+ G+ Sbjct: 10 EVDTPAILVDVDRVVANIEKAQVHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQK 69 Query: 83 EGELRRALAA 92 GE A Sbjct: 70 LGEAEVMADA 79 >gi|19115909|ref|NP_594997.1| alanine racemase (predicted) [Schizosaccharomyces pombe 972h-] gi|74625830|sp|Q9US35|DSD1_SCHPO RecName: Full=D-serine dehydratase; AltName: Full=D-serine deaminase; Short=DSD gi|6594265|emb|CAB63542.1| alanine racemase (predicted) [Schizosaccharomyces pombe] Length = 415 Score = 44.4 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 20/64 (31%), Gaps = 5/64 (7%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG---L 78 V TP + EKN + + +K + TL LG G Sbjct: 30 IQQVPTPGFVIDEAIFEKNCNRMLDRASDIGVTFRAHVKTHKTIE--GTLLQLGDGRTKA 87 Query: 79 DIVS 82 +VS Sbjct: 88 VVVS 91 >gi|302030074|gb|ADK91572.1| arginine decarboxylase [Solanum lycopersicum] Length = 502 Score = 44.4 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD----GMDTMVCY----ALKANSNQAVIKTLAHLGS--- 76 P ++ T +AFD V Y +K N ++ V++ + GS Sbjct: 2 PLVVRFPDVLKNRLETLQSAFDMAINSQGYEVHYQGVYPVKCNQDRFVVEDIVKFGSPYR 61 Query: 77 -GLDIVSEGELRRALAAPVPAE 97 GL+ S+ EL A+ Sbjct: 62 FGLEAGSKSELLLAMNCLSKGS 83 >gi|221325938|gb|ACM16848.1| arginine decarboxylase [Solanum peruvianum] Length = 222 Score = 44.4 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLKSLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|158145245|gb|ABW21854.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 44.4 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 94/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 + S+ EL A+++ E ++ K + I LAL + N E E E Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLKESGM 245 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI E + +L G ++ ID+GGGLGI Y Sbjct: 246 LDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYDGTKS 305 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + Y + + R V I Sbjct: 306 SDSDVSVGYGLQDYASTVVQAVRFVCDRKNVKHPVIC 342 >gi|158145231|gb|ABW21847.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 44.4 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 94/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 + S+ EL A+++ E ++ K + I LAL + N E E E Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLKESGM 245 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI E + +L G ++ ID+GGGLGI Y Sbjct: 246 LDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYDGTKS 305 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + Y + + R V I Sbjct: 306 SDSDVSVGYGLQDYASTVVQAVRFVCDRKNVKHPVIC 342 >gi|158145225|gb|ABW21844.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 44.4 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 94/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 + S+ EL A+++ E ++ K + I LAL + N E E E Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLKESGM 245 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI E + +L G ++ ID+GGGLGI Y Sbjct: 246 LDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYDGTKS 305 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + Y + + R V I Sbjct: 306 SDSDVSVGYGLQDYASTVVQAVRFVCDRKNVKHPVIC 342 >gi|61967684|gb|AAX56864.1| putative arginine decarboxylase [Solanum chilense] gi|61967688|gb|AAX56866.1| putative arginine decarboxylase [Solanum chilense] gi|61967692|gb|AAX56868.1| putative arginine decarboxylase [Solanum chilense] gi|61967696|gb|AAX56870.1| putative arginine decarboxylase [Solanum chilense] gi|61967698|gb|AAX56871.1| putative arginine decarboxylase [Solanum chilense] gi|158145195|gb|ABW21829.1| putative arginine decarboxylase [Solanum chilense] gi|158145197|gb|ABW21830.1| putative arginine decarboxylase [Solanum chilense] gi|158145201|gb|ABW21832.1| putative arginine decarboxylase [Solanum chilense] gi|158145205|gb|ABW21834.1| putative arginine decarboxylase [Solanum chilense] gi|158145213|gb|ABW21838.1| putative arginine decarboxylase [Solanum chilense] gi|158145217|gb|ABW21840.1| putative arginine decarboxylase [Solanum chilense] gi|158145223|gb|ABW21843.1| putative arginine decarboxylase [Solanum chilense] gi|158145235|gb|ABW21849.1| putative arginine decarboxylase [Solanum chilense] gi|158145239|gb|ABW21851.1| putative arginine decarboxylase [Solanum chilense] gi|158145249|gb|ABW21856.1| putative arginine decarboxylase [Solanum chilense] gi|158145255|gb|ABW21859.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 44.4 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 94/277 (33%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 + S+ EL A+++ E ++ K + I LAL + N E E E Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLKESGM 245 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI E + +L G ++ ID+GGGLGI Y Sbjct: 246 LDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYDGTKS 305 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + Y + + R V I Sbjct: 306 SDSDVSVGYGLQDYASTVVQAVRFVCDRKNVKHPVIC 342 >gi|317455852|gb|ADV29018.1| arginine decarboxylase [Solanum habrochaites] gi|317455862|gb|ADV29023.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 44.4 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 95/277 (34%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 + S+ EL A+++ E ++ K ++ I LAL + N E E E Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDVEYISLALVARKLQLNTVIVLEQEEE 185 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLKESGM 245 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI E + +L G ++ ID+GGGLGI Y Sbjct: 246 LDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYDGTKS 305 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + Y + + R V I Sbjct: 306 SDSDVSVGYGLQDYASTVVQAVRFVCDRKNVKHPVIC 342 >gi|90421986|ref|YP_530356.1| alanine racemase-like [Rhodopseudomonas palustris BisB18] gi|90104000|gb|ABD86037.1| alanine racemase-like [Rhodopseudomonas palustris BisB18] Length = 393 Score = 44.4 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 19/66 (28%), Gaps = 4/66 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 L++LA TP + N T + + LK V + Sbjct: 17 RLQELA----TPCLLLDEARLRGNVATMKRHLEMLGVGFRPHLKTAKCLEVARIAMTHPG 72 Query: 77 GLDIVS 82 G VS Sbjct: 73 GPATVS 78 >gi|242094536|ref|XP_002437758.1| hypothetical protein SORBIDRAFT_10g002070 [Sorghum bicolor] gi|241915981|gb|EER89125.1| hypothetical protein SORBIDRAFT_10g002070 [Sorghum bicolor] Length = 701 Score = 44.4 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 87/247 (35%), Gaps = 19/247 (7%) Query: 31 CYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGS----GL 78 + T + AF G Y +K N ++ V++ + G+ GL Sbjct: 112 VRFPDVLRHRVETLNAAFGYAVRSTGYGSRYQGVYPVKCNQDRYVVEDIVEFGAPFGFGL 171 Query: 79 DIVSEGEL---RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESELK 131 + S+ EL LAA + ++ K + LAL + N E E EL Sbjct: 172 EAGSKPELLLAMSCLAARGNPDALLICNGYKDDGYVSLALMARSMGLNTVIVLEQEEELD 231 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + + LG + + R H ++G+K + + + Sbjct: 232 IVVEASRRLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNAAQILSVVTKLKAIAMLD 291 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI + +L G +++ IDVGGGLGI Y H Sbjct: 292 CLQLLHFHIGSQIPTTALLSDGVGEAAQIYCELARLGADMRVIDVGGGLGIDYDGTHSAQ 351 Query: 252 SSSDYAS 258 + A Sbjct: 352 TDMSVAY 358 >gi|317456028|gb|ADV29106.1| arginine decarboxylase [Solanum arcanum] gi|317456030|gb|ADV29107.1| arginine decarboxylase [Solanum arcanum] gi|317456032|gb|ADV29108.1| arginine decarboxylase [Solanum arcanum] gi|317456034|gb|ADV29109.1| arginine decarboxylase [Solanum arcanum] gi|317456036|gb|ADV29110.1| arginine decarboxylase [Solanum arcanum] gi|317456038|gb|ADV29111.1| arginine decarboxylase [Solanum arcanum] gi|317456040|gb|ADV29112.1| arginine decarboxylase [Solanum arcanum] gi|317456042|gb|ADV29113.1| arginine decarboxylase [Solanum arcanum] gi|317456044|gb|ADV29114.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|317456006|gb|ADV29095.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|317455998|gb|ADV29091.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|317455990|gb|ADV29087.1| arginine decarboxylase [Solanum arcanum] gi|317455994|gb|ADV29089.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|317455930|gb|ADV29057.1| arginine decarboxylase [Solanum habrochaites] gi|317455932|gb|ADV29058.1| arginine decarboxylase [Solanum habrochaites] gi|317455934|gb|ADV29059.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|317455900|gb|ADV29042.1| arginine decarboxylase [Solanum habrochaites] gi|317455902|gb|ADV29043.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|317455898|gb|ADV29041.1| arginine decarboxylase [Solanum habrochaites] gi|317455910|gb|ADV29047.1| arginine decarboxylase [Solanum habrochaites] gi|317455914|gb|ADV29049.1| arginine decarboxylase [Solanum habrochaites] gi|317455926|gb|ADV29055.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|317455880|gb|ADV29032.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|289674140|ref|ZP_06495030.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2 [Pseudomonas syringae pv. syringae FF5] Length = 103 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 2/87 (2%) Query: 273 LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY--IVNPA 330 EPGRF+ A G +V+ K S + F++ + F P H + + + Sbjct: 15 FEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQSHDHPVIHLPTAPQS 74 Query: 331 GDRLHIHADIVGPICETGDFIALNRKI 357 D IVG +C D ++ + + Sbjct: 75 TDSSEQAYTIVGQLCTPKDVLSRRQLL 101 >gi|221326500|gb|ACM17129.1| arginine decarboxylase [Solanum pennellii] gi|221326502|gb|ACM17130.1| arginine decarboxylase [Solanum pennellii] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326494|gb|ACM17126.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326486|gb|ACM17122.1| arginine decarboxylase [Solanum peruvianum] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326482|gb|ACM17120.1| arginine decarboxylase [Solanum peruvianum] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326444|gb|ACM17101.1| arginine decarboxylase [Solanum lycopersicoides] gi|221326446|gb|ACM17102.1| arginine decarboxylase [Solanum lycopersicoides] gi|221326460|gb|ACM17109.1| arginine decarboxylase [Solanum lycopersicoides] gi|221326462|gb|ACM17110.1| arginine decarboxylase [Solanum lycopersicoides] gi|221326468|gb|ACM17113.1| arginine decarboxylase [Solanum lycopersicoides] gi|221326470|gb|ACM17114.1| arginine decarboxylase [Solanum lycopersicoides] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326406|gb|ACM17082.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326370|gb|ACM17064.1| arginine decarboxylase [Solanum chmielewskii] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326330|gb|ACM17044.1| arginine decarboxylase [Solanum huaylasense] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326302|gb|ACM17030.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDFAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326292|gb|ACM17025.1| arginine decarboxylase [Solanum arcanum] gi|221326294|gb|ACM17026.1| arginine decarboxylase [Solanum arcanum] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326286|gb|ACM17022.1| arginine decarboxylase [Solanum pennellii] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVKSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326260|gb|ACM17009.1| arginine decarboxylase [Solanum arcanum] gi|221326262|gb|ACM17010.1| arginine decarboxylase [Solanum arcanum] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326234|gb|ACM16996.1| arginine decarboxylase [Solanum pennellii] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYVVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326228|gb|ACM16993.1| arginine decarboxylase [Solanum habrochaites] gi|221326230|gb|ACM16994.1| arginine decarboxylase [Solanum habrochaites] gi|221326400|gb|ACM17079.1| arginine decarboxylase [Solanum habrochaites] gi|221326402|gb|ACM17080.1| arginine decarboxylase [Solanum habrochaites] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326214|gb|ACM16986.1| arginine decarboxylase [Solanum corneliomuelleri] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326200|gb|ACM16979.1| arginine decarboxylase [Solanum arcanum] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326176|gb|ACM16967.1| arginine decarboxylase [Solanum lycopersicum] gi|221326178|gb|ACM16968.1| arginine decarboxylase [Solanum lycopersicum] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326170|gb|ACM16964.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326240|gb|ACM16999.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326242|gb|ACM17000.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326248|gb|ACM17003.1| arginine decarboxylase [Solanum huaylasense] gi|221326250|gb|ACM17004.1| arginine decarboxylase [Solanum huaylasense] gi|221326282|gb|ACM17020.1| arginine decarboxylase [Solanum huaylasense] gi|221326332|gb|ACM17045.1| arginine decarboxylase [Solanum huaylasense] gi|221326384|gb|ACM17071.1| arginine decarboxylase [Solanum peruvianum] gi|221326386|gb|ACM17072.1| arginine decarboxylase [Solanum peruvianum] gi|221326414|gb|ACM17086.1| arginine decarboxylase [Solanum peruvianum] gi|221326484|gb|ACM17121.1| arginine decarboxylase [Solanum peruvianum] gi|221326496|gb|ACM17127.1| arginine decarboxylase [Solanum peruvianum] gi|221326498|gb|ACM17128.1| arginine decarboxylase [Solanum peruvianum] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326146|gb|ACM16952.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221326024|gb|ACM16891.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326026|gb|ACM16892.1| arginine decarboxylase [Solanum pimpinellifolium] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221325954|gb|ACM16856.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221325950|gb|ACM16854.1| arginine decarboxylase [Solanum peruvianum] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDCAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221325934|gb|ACM16846.1| arginine decarboxylase [Solanum chilense] gi|221325936|gb|ACM16847.1| arginine decarboxylase [Solanum peruvianum] gi|221325940|gb|ACM16849.1| arginine decarboxylase [Solanum peruvianum] gi|221325942|gb|ACM16850.1| arginine decarboxylase [Solanum peruvianum] gi|221325944|gb|ACM16851.1| arginine decarboxylase [Solanum peruvianum] gi|221325946|gb|ACM16852.1| arginine decarboxylase [Solanum peruvianum] gi|221325948|gb|ACM16853.1| arginine decarboxylase [Solanum peruvianum] gi|221325952|gb|ACM16855.1| arginine decarboxylase [Solanum chilense] gi|221325958|gb|ACM16858.1| arginine decarboxylase [Solanum chilense] gi|221325966|gb|ACM16862.1| arginine decarboxylase [Solanum chilense] gi|221325968|gb|ACM16863.1| arginine decarboxylase [Solanum chilense] gi|221325972|gb|ACM16865.1| arginine decarboxylase [Solanum peruvianum] gi|221325974|gb|ACM16866.1| arginine decarboxylase [Solanum peruvianum] gi|221325976|gb|ACM16867.1| arginine decarboxylase [Solanum neorickii] gi|221325978|gb|ACM16868.1| arginine decarboxylase [Solanum neorickii] gi|221325980|gb|ACM16869.1| arginine decarboxylase [Solanum neorickii] gi|221325982|gb|ACM16870.1| arginine decarboxylase [Solanum neorickii] gi|221325984|gb|ACM16871.1| arginine decarboxylase [Solanum habrochaites] gi|221325986|gb|ACM16872.1| arginine decarboxylase [Solanum habrochaites] gi|221325988|gb|ACM16873.1| arginine decarboxylase [Solanum habrochaites] gi|221325990|gb|ACM16874.1| arginine decarboxylase [Solanum habrochaites] gi|221325992|gb|ACM16875.1| arginine decarboxylase [Solanum habrochaites] gi|221325994|gb|ACM16876.1| arginine decarboxylase [Solanum habrochaites] gi|221325996|gb|ACM16877.1| arginine decarboxylase [Solanum habrochaites] gi|221325998|gb|ACM16878.1| arginine decarboxylase [Solanum habrochaites] gi|221326000|gb|ACM16879.1| arginine decarboxylase [Solanum habrochaites] gi|221326002|gb|ACM16880.1| arginine decarboxylase [Solanum habrochaites] gi|221326004|gb|ACM16881.1| arginine decarboxylase [Solanum habrochaites] gi|221326006|gb|ACM16882.1| arginine decarboxylase [Solanum habrochaites] gi|221326008|gb|ACM16883.1| arginine decarboxylase [Solanum pennellii] gi|221326010|gb|ACM16884.1| arginine decarboxylase [Solanum pennellii] gi|221326016|gb|ACM16887.1| arginine decarboxylase [Solanum habrochaites] gi|221326018|gb|ACM16888.1| arginine decarboxylase [Solanum habrochaites] gi|221326028|gb|ACM16893.1| arginine decarboxylase [Solanum arcanum] gi|221326030|gb|ACM16894.1| arginine decarboxylase [Solanum arcanum] gi|221326032|gb|ACM16895.1| arginine decarboxylase [Solanum arcanum] gi|221326034|gb|ACM16896.1| arginine decarboxylase [Solanum arcanum] gi|221326044|gb|ACM16901.1| arginine decarboxylase [Solanum lycopersicum] gi|221326046|gb|ACM16902.1| arginine decarboxylase [Solanum lycopersicum] gi|221326050|gb|ACM16904.1| arginine decarboxylase [Solanum lycopersicum] gi|221326068|gb|ACM16913.1| arginine decarboxylase [Solanum habrochaites] gi|221326070|gb|ACM16914.1| arginine decarboxylase [Solanum habrochaites] gi|221326072|gb|ACM16915.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326074|gb|ACM16916.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326076|gb|ACM16917.1| arginine decarboxylase [Solanum neorickii] gi|221326078|gb|ACM16918.1| arginine decarboxylase [Solanum neorickii] gi|221326080|gb|ACM16919.1| arginine decarboxylase [Solanum neorickii] gi|221326082|gb|ACM16920.1| arginine decarboxylase [Solanum neorickii] gi|221326084|gb|ACM16921.1| arginine decarboxylase [Solanum neorickii] gi|221326086|gb|ACM16922.1| arginine decarboxylase [Solanum neorickii] gi|221326088|gb|ACM16923.1| arginine decarboxylase [Solanum neorickii] gi|221326090|gb|ACM16924.1| arginine decarboxylase [Solanum neorickii] gi|221326136|gb|ACM16947.1| arginine decarboxylase [Solanum arcanum] gi|221326138|gb|ACM16948.1| arginine decarboxylase [Solanum arcanum] gi|221326152|gb|ACM16955.1| arginine decarboxylase [Solanum habrochaites] gi|221326154|gb|ACM16956.1| arginine decarboxylase [Solanum habrochaites] gi|221326160|gb|ACM16959.1| arginine decarboxylase [Solanum pennellii] gi|221326162|gb|ACM16960.1| arginine decarboxylase [Solanum pennellii] gi|221326164|gb|ACM16961.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326166|gb|ACM16962.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326168|gb|ACM16963.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326172|gb|ACM16965.1| arginine decarboxylase [Solanum chmielewskii] gi|221326174|gb|ACM16966.1| arginine decarboxylase [Solanum chmielewskii] gi|221326180|gb|ACM16969.1| arginine decarboxylase [Solanum neorickii] gi|221326182|gb|ACM16970.1| arginine decarboxylase [Solanum neorickii] gi|221326184|gb|ACM16971.1| arginine decarboxylase [Solanum chmielewskii] gi|221326186|gb|ACM16972.1| arginine decarboxylase [Solanum chmielewskii] gi|221326196|gb|ACM16977.1| arginine decarboxylase [Solanum huaylasense x Solanum peruvianum] gi|221326198|gb|ACM16978.1| arginine decarboxylase [Solanum huaylasense x Solanum peruvianum] gi|221326202|gb|ACM16980.1| arginine decarboxylase [Solanum arcanum] gi|221326204|gb|ACM16981.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326206|gb|ACM16982.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326212|gb|ACM16985.1| arginine decarboxylase [Solanum corneliomuelleri] gi|221326220|gb|ACM16989.1| arginine decarboxylase [Solanum arcanum] gi|221326222|gb|ACM16990.1| arginine decarboxylase [Solanum arcanum] gi|221326232|gb|ACM16995.1| arginine decarboxylase [Solanum pennellii] gi|221326236|gb|ACM16997.1| arginine decarboxylase [Solanum pennellii] gi|221326238|gb|ACM16998.1| arginine decarboxylase [Solanum pennellii] gi|221326252|gb|ACM17005.1| arginine decarboxylase [Solanum arcanum x Solanum peruvianum] gi|221326254|gb|ACM17006.1| arginine decarboxylase [Solanum arcanum x Solanum peruvianum] gi|221326256|gb|ACM17007.1| arginine decarboxylase [Solanum habrochaites] gi|221326258|gb|ACM17008.1| arginine decarboxylase [Solanum habrochaites] gi|221326268|gb|ACM17013.1| arginine decarboxylase [Solanum arcanum] gi|221326270|gb|ACM17014.1| arginine decarboxylase [Solanum arcanum] gi|221326272|gb|ACM17015.1| arginine decarboxylase [Solanum habrochaites] gi|221326274|gb|ACM17016.1| arginine decarboxylase [Solanum habrochaites] gi|221326276|gb|ACM17017.1| arginine decarboxylase [Solanum neorickii] gi|221326278|gb|ACM17018.1| arginine decarboxylase [Solanum neorickii] gi|221326280|gb|ACM17019.1| arginine decarboxylase [Solanum huaylasense] gi|221326284|gb|ACM17021.1| arginine decarboxylase [Solanum pennellii] gi|221326288|gb|ACM17023.1| arginine decarboxylase [Solanum habrochaites] gi|221326290|gb|ACM17024.1| arginine decarboxylase [Solanum habrochaites] gi|221326296|gb|ACM17027.1| arginine decarboxylase [Solanum chilense] gi|221326298|gb|ACM17028.1| arginine decarboxylase [Solanum chilense] gi|221326308|gb|ACM17033.1| arginine decarboxylase [Solanum chmielewskii] gi|221326310|gb|ACM17034.1| arginine decarboxylase [Solanum chmielewskii] gi|221326312|gb|ACM17035.1| arginine decarboxylase [Solanum chmielewskii] gi|221326314|gb|ACM17036.1| arginine decarboxylase [Solanum chmielewskii] gi|221326316|gb|ACM17037.1| arginine decarboxylase [Solanum neorickii] gi|221326318|gb|ACM17038.1| arginine decarboxylase [Solanum neorickii] gi|221326324|gb|ACM17041.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326326|gb|ACM17042.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326328|gb|ACM17043.1| arginine decarboxylase [Solanum huaylasense] gi|221326334|gb|ACM17046.1| arginine decarboxylase [Solanum huaylasense] gi|221326336|gb|ACM17047.1| arginine decarboxylase [Solanum arcanum] gi|221326338|gb|ACM17048.1| arginine decarboxylase [Solanum arcanum] gi|221326340|gb|ACM17049.1| arginine decarboxylase [Solanum pennellii] gi|221326342|gb|ACM17050.1| arginine decarboxylase [Solanum pennellii] gi|221326344|gb|ACM17051.1| arginine decarboxylase [Solanum peruvianum] gi|221326346|gb|ACM17052.1| arginine decarboxylase [Solanum peruvianum] gi|221326348|gb|ACM17053.1| arginine decarboxylase [Solanum chmielewskii] gi|221326350|gb|ACM17054.1| arginine decarboxylase [Solanum chmielewskii] gi|221326352|gb|ACM17055.1| arginine decarboxylase [Solanum chmielewskii] gi|221326354|gb|ACM17056.1| arginine decarboxylase [Solanum chmielewskii] gi|221326356|gb|ACM17057.1| arginine decarboxylase [Solanum chmielewskii] gi|221326358|gb|ACM17058.1| arginine decarboxylase [Solanum chmielewskii] gi|221326360|gb|ACM17059.1| arginine decarboxylase [Solanum neorickii] gi|221326362|gb|ACM17060.1| arginine decarboxylase [Solanum neorickii] gi|221326364|gb|ACM17061.1| arginine decarboxylase [Solanum chmielewskii] gi|221326366|gb|ACM17062.1| arginine decarboxylase [Solanum chmielewskii] gi|221326368|gb|ACM17063.1| arginine decarboxylase [Solanum chmielewskii] gi|221326372|gb|ACM17065.1| arginine decarboxylase [Solanum chmielewskii] gi|221326374|gb|ACM17066.1| arginine decarboxylase [Solanum chmielewskii] gi|221326376|gb|ACM17067.1| arginine decarboxylase [Solanum chilense] gi|221326382|gb|ACM17070.1| arginine decarboxylase [Solanum chilense] gi|221326408|gb|ACM17083.1| arginine decarboxylase [Solanum peruvianum] gi|221326410|gb|ACM17084.1| arginine decarboxylase [Solanum peruvianum] gi|221326412|gb|ACM17085.1| arginine decarboxylase [Solanum peruvianum] gi|221326416|gb|ACM17087.1| arginine decarboxylase [Solanum pennellii] gi|221326418|gb|ACM17088.1| arginine decarboxylase [Solanum pennellii] gi|221326420|gb|ACM17089.1| arginine decarboxylase [Solanum pennellii] gi|221326422|gb|ACM17090.1| arginine decarboxylase [Solanum pennellii] gi|221326426|gb|ACM17092.1| arginine decarboxylase [Solanum chilense] gi|221326430|gb|ACM17094.1| arginine decarboxylase [Solanum chilense] gi|221326434|gb|ACM17096.1| arginine decarboxylase [Solanum chilense] gi|221326438|gb|ACM17098.1| arginine decarboxylase [Solanum chilense] gi|221326450|gb|ACM17104.1| arginine decarboxylase [Solanum chilense] gi|221326456|gb|ACM17107.1| arginine decarboxylase [Solanum chilense] gi|221326458|gb|ACM17108.1| arginine decarboxylase [Solanum chilense] gi|221326466|gb|ACM17112.1| arginine decarboxylase [Solanum chilense] gi|221326476|gb|ACM17117.1| arginine decarboxylase [Solanum chilense] gi|221326478|gb|ACM17118.1| arginine decarboxylase [Solanum chilense] gi|221326480|gb|ACM17119.1| arginine decarboxylase [Solanum peruvianum] gi|221326490|gb|ACM17124.1| arginine decarboxylase [Solanum chilense] gi|221326492|gb|ACM17125.1| arginine decarboxylase [Solanum chilense] gi|221326504|gb|ACM17131.1| arginine decarboxylase [Solanum peruvianum] gi|221326506|gb|ACM17132.1| arginine decarboxylase [Solanum peruvianum] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221325932|gb|ACM16845.1| arginine decarboxylase [Solanum chilense] gi|221325956|gb|ACM16857.1| arginine decarboxylase [Solanum chilense] gi|221325960|gb|ACM16859.1| arginine decarboxylase [Solanum chilense] gi|221325962|gb|ACM16860.1| arginine decarboxylase [Solanum chilense] gi|221325964|gb|ACM16861.1| arginine decarboxylase [Solanum chilense] gi|221326140|gb|ACM16949.1| arginine decarboxylase [Solanum chilense] gi|221326142|gb|ACM16950.1| arginine decarboxylase [Solanum chilense] gi|221326144|gb|ACM16951.1| arginine decarboxylase [Solanum chilense] gi|221326244|gb|ACM17001.1| arginine decarboxylase [Solanum chilense] gi|221326246|gb|ACM17002.1| arginine decarboxylase [Solanum chilense] gi|221326300|gb|ACM17029.1| arginine decarboxylase [Solanum chilense] gi|221326378|gb|ACM17068.1| arginine decarboxylase [Solanum chilense] gi|221326380|gb|ACM17069.1| arginine decarboxylase [Solanum chilense] gi|221326404|gb|ACM17081.1| arginine decarboxylase [Solanum chilense] gi|221326424|gb|ACM17091.1| arginine decarboxylase [Solanum chilense] gi|221326428|gb|ACM17093.1| arginine decarboxylase [Solanum chilense] gi|221326432|gb|ACM17095.1| arginine decarboxylase [Solanum chilense] gi|221326436|gb|ACM17097.1| arginine decarboxylase [Solanum chilense] gi|221326440|gb|ACM17099.1| arginine decarboxylase [Solanum chilense] gi|221326442|gb|ACM17100.1| arginine decarboxylase [Solanum chilense] gi|221326448|gb|ACM17103.1| arginine decarboxylase [Solanum chilense] gi|221326464|gb|ACM17111.1| arginine decarboxylase [Solanum chilense] gi|221326472|gb|ACM17115.1| arginine decarboxylase [Solanum chilense] gi|221326474|gb|ACM17116.1| arginine decarboxylase [Solanum chilense] gi|221326488|gb|ACM17123.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|158145227|gb|ABW21845.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSERYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|158145209|gb|ABW21836.1| putative arginine decarboxylase [Solanum chilense] gi|158145215|gb|ABW21839.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|158145199|gb|ABW21831.1| putative arginine decarboxylase [Solanum chilense] gi|158145203|gb|ABW21833.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|158145189|gb|ABW21826.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|158145177|gb|ABW21820.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|158145173|gb|ABW21818.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|158145127|gb|ABW21795.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145129|gb|ABW21796.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145131|gb|ABW21797.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145133|gb|ABW21798.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145135|gb|ABW21799.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145139|gb|ABW21801.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145141|gb|ABW21802.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145143|gb|ABW21803.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145145|gb|ABW21804.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145147|gb|ABW21805.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145149|gb|ABW21806.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145151|gb|ABW21807.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145159|gb|ABW21811.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145163|gb|ABW21813.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145167|gb|ABW21815.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|73808422|gb|AAZ85211.1| arginine decarboxylase [Solanum chmielewskii] gi|73808424|gb|AAZ85212.1| arginine decarboxylase [Solanum chmielewskii] gi|73808426|gb|AAZ85213.1| arginine decarboxylase [Solanum chmielewskii] gi|73808428|gb|AAZ85214.1| arginine decarboxylase [Solanum chmielewskii] gi|73808430|gb|AAZ85215.1| arginine decarboxylase [Solanum chmielewskii] gi|73808432|gb|AAZ85216.1| arginine decarboxylase [Solanum chmielewskii] gi|73808434|gb|AAZ85217.1| arginine decarboxylase [Solanum chmielewskii] gi|73808436|gb|AAZ85218.1| arginine decarboxylase [Solanum chmielewskii] gi|73808438|gb|AAZ85219.1| arginine decarboxylase [Solanum chmielewskii] gi|73808440|gb|AAZ85220.1| arginine decarboxylase [Solanum chmielewskii] gi|317455976|gb|ADV29080.1| arginine decarboxylase [Solanum arcanum] gi|317455986|gb|ADV29085.1| arginine decarboxylase [Solanum arcanum] gi|317455988|gb|ADV29086.1| arginine decarboxylase [Solanum arcanum] gi|317455992|gb|ADV29088.1| arginine decarboxylase [Solanum arcanum] gi|317455996|gb|ADV29090.1| arginine decarboxylase [Solanum arcanum] gi|317456000|gb|ADV29092.1| arginine decarboxylase [Solanum arcanum] gi|317456002|gb|ADV29093.1| arginine decarboxylase [Solanum arcanum] gi|317456004|gb|ADV29094.1| arginine decarboxylase [Solanum arcanum] gi|317456008|gb|ADV29096.1| arginine decarboxylase [Solanum arcanum] gi|317456010|gb|ADV29097.1| arginine decarboxylase [Solanum arcanum] gi|317456012|gb|ADV29098.1| arginine decarboxylase [Solanum arcanum] gi|317456014|gb|ADV29099.1| arginine decarboxylase [Solanum arcanum] gi|317456016|gb|ADV29100.1| arginine decarboxylase [Solanum arcanum] gi|317456018|gb|ADV29101.1| arginine decarboxylase [Solanum arcanum] gi|317456020|gb|ADV29102.1| arginine decarboxylase [Solanum arcanum] gi|317456024|gb|ADV29104.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|73808420|gb|AAZ85210.1| arginine decarboxylase [Solanum ochranthum] Length = 444 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|61967704|gb|AAX56874.1| putative arginine decarboxylase [Solanum habrochaites] gi|61967706|gb|AAX56875.1| putative arginine decarboxylase [Solanum habrochaites] gi|61967710|gb|AAX56877.1| putative arginine decarboxylase [Solanum habrochaites] gi|61967714|gb|AAX56879.1| putative arginine decarboxylase [Solanum habrochaites] gi|61967718|gb|AAX56881.1| putative arginine decarboxylase [Solanum habrochaites] gi|317455848|gb|ADV29016.1| arginine decarboxylase [Solanum habrochaites] gi|317455850|gb|ADV29017.1| arginine decarboxylase [Solanum habrochaites] gi|317455854|gb|ADV29019.1| arginine decarboxylase [Solanum habrochaites] gi|317455856|gb|ADV29020.1| arginine decarboxylase [Solanum habrochaites] gi|317455858|gb|ADV29021.1| arginine decarboxylase [Solanum habrochaites] gi|317455860|gb|ADV29022.1| arginine decarboxylase [Solanum habrochaites] gi|317455864|gb|ADV29024.1| arginine decarboxylase [Solanum habrochaites] gi|317455866|gb|ADV29025.1| arginine decarboxylase [Solanum habrochaites] gi|317455868|gb|ADV29026.1| arginine decarboxylase [Solanum habrochaites] gi|317455870|gb|ADV29027.1| arginine decarboxylase [Solanum habrochaites] gi|317455872|gb|ADV29028.1| arginine decarboxylase [Solanum habrochaites] gi|317455874|gb|ADV29029.1| arginine decarboxylase [Solanum habrochaites] gi|317455882|gb|ADV29033.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|61967670|gb|AAX56857.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145137|gb|ABW21800.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145153|gb|ABW21808.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145155|gb|ABW21809.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145157|gb|ABW21810.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145165|gb|ABW21814.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145169|gb|ABW21816.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145181|gb|ABW21822.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145221|gb|ABW21842.1| putative arginine decarboxylase [Solanum chilense] gi|317455978|gb|ADV29081.1| arginine decarboxylase [Solanum arcanum] gi|317455982|gb|ADV29083.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|61967672|gb|AAX56858.1| putative arginine decarboxylase [Solanum peruvianum] gi|61967676|gb|AAX56860.1| putative arginine decarboxylase [Solanum peruvianum] gi|61967680|gb|AAX56862.1| putative arginine decarboxylase [Solanum peruvianum] gi|61967686|gb|AAX56865.1| putative arginine decarboxylase [Solanum chilense] gi|61967690|gb|AAX56867.1| putative arginine decarboxylase [Solanum chilense] gi|61967694|gb|AAX56869.1| putative arginine decarboxylase [Solanum chilense] gi|61967700|gb|AAX56872.1| putative arginine decarboxylase [Solanum chilense] gi|61967702|gb|AAX56873.1| putative arginine decarboxylase [Solanum chilense] gi|158145171|gb|ABW21817.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145179|gb|ABW21821.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145185|gb|ABW21824.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145193|gb|ABW21828.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145211|gb|ABW21837.1| putative arginine decarboxylase [Solanum chilense] gi|158145219|gb|ABW21841.1| putative arginine decarboxylase [Solanum chilense] gi|158145233|gb|ABW21848.1| putative arginine decarboxylase [Solanum chilense] gi|158145241|gb|ABW21852.1| putative arginine decarboxylase [Solanum chilense] gi|158145251|gb|ABW21857.1| putative arginine decarboxylase [Solanum chilense] gi|158145253|gb|ABW21858.1| putative arginine decarboxylase [Solanum chilense] gi|158145257|gb|ABW21860.1| putative arginine decarboxylase [Solanum chilense] gi|317455952|gb|ADV29068.1| arginine decarboxylase [Solanum arcanum] gi|317455954|gb|ADV29069.1| arginine decarboxylase [Solanum arcanum] gi|317455956|gb|ADV29070.1| arginine decarboxylase [Solanum arcanum] gi|317455958|gb|ADV29071.1| arginine decarboxylase [Solanum arcanum] gi|317455960|gb|ADV29072.1| arginine decarboxylase [Solanum arcanum] gi|317455962|gb|ADV29073.1| arginine decarboxylase [Solanum arcanum] gi|317455964|gb|ADV29074.1| arginine decarboxylase [Solanum arcanum] gi|317455966|gb|ADV29075.1| arginine decarboxylase [Solanum arcanum] gi|317455970|gb|ADV29077.1| arginine decarboxylase [Solanum arcanum] gi|317455972|gb|ADV29078.1| arginine decarboxylase [Solanum arcanum] gi|317455974|gb|ADV29079.1| arginine decarboxylase [Solanum arcanum] gi|317455980|gb|ADV29082.1| arginine decarboxylase [Solanum arcanum] gi|317455984|gb|ADV29084.1| arginine decarboxylase [Solanum arcanum] gi|317456022|gb|ADV29103.1| arginine decarboxylase [Solanum arcanum] gi|317456026|gb|ADV29105.1| arginine decarboxylase [Solanum arcanum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|61967708|gb|AAX56876.1| putative arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|61967712|gb|AAX56878.1| putative arginine decarboxylase [Solanum habrochaites] gi|317455876|gb|ADV29030.1| arginine decarboxylase [Solanum habrochaites] gi|317455892|gb|ADV29038.1| arginine decarboxylase [Solanum habrochaites] gi|317455894|gb|ADV29039.1| arginine decarboxylase [Solanum habrochaites] gi|317455896|gb|ADV29040.1| arginine decarboxylase [Solanum habrochaites] gi|317455904|gb|ADV29044.1| arginine decarboxylase [Solanum habrochaites] gi|317455906|gb|ADV29045.1| arginine decarboxylase [Solanum habrochaites] gi|317455908|gb|ADV29046.1| arginine decarboxylase [Solanum habrochaites] gi|317455912|gb|ADV29048.1| arginine decarboxylase [Solanum habrochaites] gi|317455916|gb|ADV29050.1| arginine decarboxylase [Solanum habrochaites] gi|317455918|gb|ADV29051.1| arginine decarboxylase [Solanum habrochaites] gi|317455920|gb|ADV29052.1| arginine decarboxylase [Solanum habrochaites] gi|317455922|gb|ADV29053.1| arginine decarboxylase [Solanum habrochaites] gi|317455924|gb|ADV29054.1| arginine decarboxylase [Solanum habrochaites] gi|317455928|gb|ADV29056.1| arginine decarboxylase [Solanum habrochaites] gi|317455936|gb|ADV29060.1| arginine decarboxylase [Solanum habrochaites] gi|317455938|gb|ADV29061.1| arginine decarboxylase [Solanum habrochaites] gi|317455940|gb|ADV29062.1| arginine decarboxylase [Solanum habrochaites] gi|317455942|gb|ADV29063.1| arginine decarboxylase [Solanum habrochaites] gi|317455944|gb|ADV29064.1| arginine decarboxylase [Solanum habrochaites] gi|317455946|gb|ADV29065.1| arginine decarboxylase [Solanum habrochaites] gi|317455948|gb|ADV29066.1| arginine decarboxylase [Solanum habrochaites] gi|317455950|gb|ADV29067.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|61967716|gb|AAX56880.1| putative arginine decarboxylase [Solanum habrochaites] gi|317455878|gb|ADV29031.1| arginine decarboxylase [Solanum habrochaites] gi|317455884|gb|ADV29034.1| arginine decarboxylase [Solanum habrochaites] gi|317455886|gb|ADV29035.1| arginine decarboxylase [Solanum habrochaites] gi|317455888|gb|ADV29036.1| arginine decarboxylase [Solanum habrochaites] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|61967682|gb|AAX56863.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|61967674|gb|AAX56859.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEEYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|61967664|gb|AAX56854.1| putative arginine decarboxylase [Solanum peruvianum] gi|61967678|gb|AAX56861.1| putative arginine decarboxylase [Solanum peruvianum] gi|73808452|gb|AAZ85226.1| arginine decarboxylase [Solanum pimpinellifolium] gi|158145161|gb|ABW21812.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145175|gb|ABW21819.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145183|gb|ABW21823.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145187|gb|ABW21825.1| putative arginine decarboxylase [Solanum peruvianum] gi|158145191|gb|ABW21827.1| putative arginine decarboxylase [Solanum peruvianum] Length = 448 Score = 44.4 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|315425297|dbj|BAJ46964.1| alanine racemase domain protein [Candidatus Caldiarchaeum subterraneum] Length = 360 Score = 44.4 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 23/70 (32%), Gaps = 1/70 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +++N ++ + + +K + + G+ G+ + GE Sbjct: 8 TPALIVDVKVLKRNITEMADFARSLGKKLRPHVKTHKTPEIAWMQMEAGADGICVQKLGE 67 Query: 86 LRRALAAPVP 95 A + Sbjct: 68 AEVMAEAGLD 77 >gi|126465116|ref|YP_001040225.1| arginine decarboxylase [Staphylothermus marinus F1] gi|126013939|gb|ABN69317.1| arginine decarboxylase [Staphylothermus marinus F1] Length = 589 Score = 44.4 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 93/272 (34%), Gaps = 19/272 (6%) Query: 41 YLTFSNAFDGMDTM----VCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAA 92 Y F AF Y LK+NS V+ T+ G G + + E++ Sbjct: 70 YEAFMEAFRKFGYKGAFKPVYPLKSNSTPIVVDTIWRYGIKYSWGFNAGTYPEVKLISKY 129 Query: 93 PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 R++ K +DL + + ++ + + + +V Sbjct: 130 INEKPRLLVVDGIKDNKLLDLLSKMCDSWEIIVDIESMRDADLLSKYQDLNIGLRVKV-- 187 Query: 153 DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK 212 + ++ + + KFG+ I+ + + +P + D+ Sbjct: 188 -TSKSSGLWSHSSGLDSKFGLLINTLDEMVEKHPWVPNRTVLLHVHAGSQITDKNRLEDI 246 Query: 213 AFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF-------- 264 + + +++ NI++ID GGGL Y S++Y+ + Sbjct: 247 IRETIILYNNLVKTGFKNIRYIDFGGGLAYPYIEASNHVFSANYSLNEYAEILVKELVKS 306 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 I+ E GR++VA I VTK+I + Sbjct: 307 AENTPDIVFEGGRYIVAPHRITVTKIIDTRPY 338 >gi|87122819|ref|ZP_01078691.1| putative threonine aldolase [Marinomonas sp. MED121] gi|86161925|gb|EAQ63218.1| putative threonine aldolase [Marinomonas sp. MED121] Length = 382 Score = 44.4 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 8/76 (10%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + + + QTP A+EKN T M K + + + L Sbjct: 18 GMDVADI----QTPCLVVDLDALEKNIKTMGQYAKDMGVRHRVHGKMHKSVDIALLQEQL 73 Query: 75 G--SGLDI--VSEGEL 86 G G+ VSE E+ Sbjct: 74 GDSCGVCCQKVSEAEV 89 >gi|37222548|gb|AAO49839.1| ornithine decarboxylase [Vitis vinifera] Length = 276 Score = 44.4 bits (103), Expect = 0.040, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 101/284 (35%), Gaps = 20/284 (7%) Query: 63 SNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCF 122 + + LA LGS D S E+ L V ++RI+F+ K I A G+ Sbjct: 1 PDPTFLAALAALGSSFDCASRTEIETVLGLGVSSDRIIFANPCKAESHIKYAASVGVNLT 60 Query: 123 NVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLY 182 +S E++ + + + RV P ++ + + + + + Sbjct: 61 TFDSRDEIEKIRKYHPK----CALLIRVKPPDDSGARCPLESKY------GALPEEVTPL 110 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ-LRSNGHNIQHIDVGGGLG 241 A+ + +SGV HIGS +++ A R + R + +++GGG Sbjct: 111 LQAAQDARLTVSGVSFHIGSGATLAQAYRGAIAEARAVFDTASRLGLPRMHVLNIGGGFT 170 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 H D + SL + II EPGR+ LVT +I + ++ Sbjct: 171 XGPHFDDATXAIKS--SLQAYFPNEHGLTIIAEPGRYFAESAFTLVTNIIGKRVRSELRE 228 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 ++ + + L D + + ++ P C Sbjct: 229 YWINDGIYGSLNCILNDHATVTAKPLACTSNSVN-------PTC 265 >gi|260429750|ref|ZP_05783726.1| metal-activated pyridoxal enzyme [Citreicella sp. SE45] gi|260419233|gb|EEX12487.1| metal-activated pyridoxal enzyme [Citreicella sp. SE45] Length = 387 Score = 44.0 bits (102), Expect = 0.040, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V K LG G+ Sbjct: 25 ADIQTPCLVLDLDALERNIKVMGDYAKAHGMRHRVHGKMHKSVDVAKLQEKLGGAVGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|315426064|dbj|BAJ47711.1| alanine racemase domain protein [Candidatus Caldiarchaeum subterraneum] Length = 366 Score = 44.0 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 23/70 (32%), Gaps = 1/70 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +++N ++ + + +K + + G+ G+ + GE Sbjct: 14 TPALIVDVKVLKRNITEMADFARSLGKKLRPHVKTHKTPEIAWMQMEAGADGICVQKLGE 73 Query: 86 LRRALAAPVP 95 A + Sbjct: 74 AEVMAEAGLD 83 >gi|194206546|ref|XP_001917984.1| PREDICTED: similar to Multiple epidermal growth factor-like domains 11 precursor (Multiple EGF-like-domains 11) [Equus caballus] Length = 1044 Score = 44.0 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 26/274 (9%), Positives = 43/274 (15%), Gaps = 6/274 (2%) Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 E E + V + G C + Sbjct: 88 CCPGYYENGDFCIPLCTEECVHGRCVSPDTCHCEPGWG-GPDCSSGCDSDHWGPHCSNRC 146 Query: 139 SLGK---KAPIAFRVNPDINANTHKKISTGKKE-DKFGIPIHQIHSLYAYASTLPGVKIS 194 PI + G + A G + Sbjct: 147 QCQNGALCNPITGACVCAAGFRGWRCEELCAPGTHGKGCQLPCQCHHGAGCDPRTGECLC 206 Query: 195 GV-DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + + H A LR Q + H G A + PP + Sbjct: 207 APGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGT 266 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + A + + N Sbjct: 267 FGQNCSQDCPCHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGTFGFQCSQRCDCHNGGQC 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 P + GP C + Sbjct: 327 SPTTGVCECEPGYKGPRCQERLCPEGLHGPGCTS 360 >gi|38037070|gb|AAR08422.1| arginine decarboxylase 1 [Pringlea antiscorbutica] Length = 735 Score = 44.0 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 12/81 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGS--- 76 P ++ + +AFD Y +K N ++ +I+ + GS Sbjct: 128 PLIVRFPDVLKNRLESLQSAFDFAIQTQGYDSHYQGVYPVKCNQDRFIIEDIVEFGSSFR 187 Query: 77 -GLDIVSEGELRRALAAPVPA 96 GL+ S+ E+ A++ Sbjct: 188 FGLEAGSKPEILLAMSCLCKG 208 >gi|317012807|gb|ADU83415.1| arginine decarboxylase [Helicobacter pylori Lithuania75] Length = 615 Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 89/281 (31%), Gaps = 27/281 (9%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLNYGLEAGSKSEL-IIAMSYTNPKAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA-----VSLGKKAPIAFRVNPDINA 156 K + I+L + + E + + P +A Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNDFVACPKIGIRIRLHSA 193 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFK 215 T +G KFG+ ++ + HIGSQI I KA + Sbjct: 194 GTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKALR 253 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +L +LR G + GG ++ H+ +Y Sbjct: 254 EAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|72383214|ref|YP_292569.1| arginine decarboxylase [Prochlorococcus marinus str. NATL2A] gi|72003064|gb|AAZ58866.1| arginine decarboxylase [Prochlorococcus marinus str. NATL2A] Length = 647 Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 91/253 (35%), Gaps = 21/253 (8%) Query: 17 SLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANS 63 L +L +++ P +E AF+ + +K N Sbjct: 52 DLMELLDELESRKLKFPLLIRFDDILEDCLKNLHKAFEKAINDYQYQGKYQGVFPIKCNQ 111 Query: 64 NQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----L 115 + V++ L GS GL+ S+ EL AL+ + ++ K I+ A Sbjct: 112 QRHVVEELITCGSKWNFGLEAGSKPELLIALSILEDPKALLICNGYKDQRYIETAILARQ 171 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 +E ++++ + + + LG I R ++ S G K Sbjct: 172 LGRQPIVVIEQANDVELIIKSSNLLGASPLIGIRAKLSSQSSGRWSSSIGDKSKFGLSIP 231 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 + ++ ++ + H+GSQI+ I A + + +L + G + ++D Sbjct: 232 EILKAIKRLKEANLLNELKLLHFHLGSQINDIGVLKDALQEAGQIYAELINLGAPMGYLD 291 Query: 236 VGGGLGIAYHSDH 248 VGGGLGI Y Sbjct: 292 VGGGLGIDYDGSQ 304 >gi|307637695|gb|ADN80145.1| Arginine decarboxylase [Helicobacter pylori 908] gi|325996297|gb|ADZ51702.1| Arginine decarboxylase [Helicobacter pylori 2018] gi|325997886|gb|ADZ50094.1| Arginine decarboxylase [Helicobacter pylori 2017] Length = 615 Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 88/281 (31%), Gaps = 27/281 (9%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA-VIKTL---AHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + V+ + L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLNYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA-----VSLGKKAPIAFRVNPDINA 156 K + I+L + + E + + P +A Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNDFVACPKIGIRIRLHSA 193 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFK 215 T +G KFG+ ++ + HIGSQI I KA + Sbjct: 194 GTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKALR 253 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +L +LR G + GG ++ H+ +Y Sbjct: 254 EAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|308183138|ref|YP_003927265.1| arginine decarboxylase [Helicobacter pylori PeCan4] gi|308065323|gb|ADO07215.1| arginine decarboxylase [Helicobacter pylori PeCan4] Length = 615 Score = 44.0 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 93/281 (33%), Gaps = 27/281 (9%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPKAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI-----NA 156 K + I+L + + E + +++ K+ I +A Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVTKQNDFVACPKIGIRIRLHSA 193 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFK 215 T +G KFG+ ++ + HIGSQI I KA + Sbjct: 194 GTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKALR 253 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +L +LR G + GG ++ H+ +Y Sbjct: 254 EAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDVDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|254779590|ref|YP_003057696.1| arginine decarboxylase [Helicobacter pylori B38] gi|254001502|emb|CAX29520.1| Biosynthetic arginine decarboxylase(ADC) [Helicobacter pylori B38] Length = 615 Score = 44.0 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 93/281 (33%), Gaps = 27/281 (9%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPKAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI-----NA 156 K + I+L + + E + +++ K+ I +A Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVTKQNDFVACPKIGIRIRLHSA 193 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFK 215 T +G KFG+ ++ + HIGSQI I KA + Sbjct: 194 GTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKALR 253 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +L +LR G + GG ++ H+ +Y Sbjct: 254 EAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|149909881|ref|ZP_01898531.1| metal-activated pyridoxal enzyme [Moritella sp. PE36] gi|149807046|gb|EDM67004.1| metal-activated pyridoxal enzyme [Moritella sp. PE36] Length = 363 Score = 44.0 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 17/71 (23%), Gaps = 1/71 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIVS 82 + TP + N T V K + + + G G+ I Sbjct: 8 ELDTPCLVIDKRKLMHNIETMQKFAAAKSKHVRPHAKTHKCVEICQLQLDAGSIGISITK 67 Query: 83 EGELRRALAAP 93 E A Sbjct: 68 PSEAYELAKAH 78 >gi|153831634|ref|ZP_01984301.1| metal-activated pyridoxal enzyme [Vibrio harveyi HY01] gi|148872144|gb|EDL70961.1| metal-activated pyridoxal enzyme [Vibrio harveyi HY01] Length = 368 Score = 44.0 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 1/69 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + ++TP ++ N + + + KA+ A+ + G+ G+ + Sbjct: 3 INQLETPSLFVDIDKMKTNIKAMQQRINDLGLTLRPHTKAHKIPAIAQMQLDAGAQGICV 62 Query: 81 VSEGELRRA 89 GE Sbjct: 63 AKLGEAEVM 71 >gi|307947153|ref|ZP_07662488.1| alanine racemase domain protein [Roseibium sp. TrichSKD4] gi|307770817|gb|EFO30043.1| alanine racemase domain protein [Roseibium sp. TrichSKD4] Length = 355 Score = 44.0 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 1/75 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 +QTP ++ N FD + +K + A+ + G+ G++ Sbjct: 7 IDQLQTPVAIIDEDVMDANIKVVQRYFDEIGRSFRPHIKTHKIPALARKQVEAGAIGINC 66 Query: 81 VSEGELRRALAAPVP 95 E A Sbjct: 67 QKISEAEVFANAGFN 81 >gi|157119736|ref|XP_001659481.1| laminin A chain, putative [Aedes aegypti] gi|108875197|gb|EAT39422.1| laminin A chain, putative [Aedes aegypti] Length = 3701 Score = 44.0 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 15/276 (5%), Positives = 38/276 (13%), Gaps = 3/276 (1%) Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 G + + E+ + GV + + + Sbjct: 342 HGHSNECIYSEEIDEKQLSLDIHGNYEGGGVCQNCQHNTEGINCNKCKNTFYRPYGKRWD 401 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 N + + + Sbjct: 402 EVDVCQPCNCDHFYSTGNCEEETGRCECRPEFNPPNCDSCSYGHFGYPNCRPCECNLNGT 461 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G + + + + G + Sbjct: 462 IGYHCEAINGECPCKPNFGGAHCKQCANGYYDFPECEPCGCNEIGSVSDVCDFGSGQCQC 521 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + H + D + +V + Sbjct: 522 KPNFAGQHCEKCKNGFYNYPSCT-YCNCDSRGTLDEVCDKG-NGQCLCREGYGGPRCDQC 579 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPI-CETG 348 Y Y + + D+ G C Sbjct: 580 IPGYYNYPDCVPCNCSGAGSVSTVCDVTGKCSCLPN 615 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 18/267 (6%), Positives = 48/267 (17%), Gaps = 5/267 (1%) Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK--TLNQRAVS 139 S ++ + + + +E ++ Sbjct: 268 SIKDISIGGRCMCNGHANTCNVHKDHRLTTRILACQCQHNTCGIQCAECCPGFEQKKWRQ 327 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 P + S E + + IH G++ + Sbjct: 328 NTNARPFQCEPCNCHGHSNECIYSEEIDEKQLSLDIHGN-YEGGGVCQNCQHNTEGINCN 386 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 + ++ + G + S Y Sbjct: 387 KCKNTFYRPYGKRWDEVDVCQPCNCDHFYSTGNCEEETGRCECRPEFNPPNCDSCSYGHF 446 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + +C + G + A P + Sbjct: 447 GYPNCRPCECNLNGTIGYHC--EAINGECPCKPNFGGAHCKQCANGYYDFPECEPCGCNE 504 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICE 346 ++ + + + + G CE Sbjct: 505 IGSVSDVCDFGSGQCQCKPNFAGQHCE 531 >gi|302755028|ref|XP_002960938.1| hypothetical protein SELMODRAFT_402429 [Selaginella moellendorffii] gi|300171877|gb|EFJ38477.1| hypothetical protein SELMODRAFT_402429 [Selaginella moellendorffii] Length = 2174 Score = 44.0 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 34/302 (11%), Positives = 59/302 (19%), Gaps = 22/302 (7%) Query: 60 KANSNQAVIKTLAHLGSGLD--IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 K NS Q + K G D VS EL L A + + A Sbjct: 1636 KCNSRQHMCKE-KCQLPGCDNICVSPSELDHKLHACHEKMCPTPCCMPACHRKCATADHF 1694 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 ++ E + Q A + + K + K +F Sbjct: 1695 HSMKSGIQHFCESEHPCQEACQSPGICDV-------VTEVVKKTKTFVGKRSQFEYEHVS 1747 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQ-----IESFHKAFKLLRDLTQQLRSNGHNIQ 232 + +P + H+ Sbjct: 1748 EQNGVRKGCCVPVPAFNNTHSGPHVHTTNPSAIHFCPVRCQGCGYFCNLAIGHRGLHDTT 1807 Query: 233 HIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL---EPGRFLVADVGILVTK 289 H ++ + + Y+ V + V Sbjct: 1808 HGNMTDKFFASETEEVDILD-RKYSWGESGAAEMCMMHCKARGRGHVHLAVCERNKSVFG 1866 Query: 290 VISIKKSADKTFVILDVA---MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 V D N + AY + +P D + C Sbjct: 1867 VCKAISIPDGARHETKKYGPDFNVAKDELTHAAYWKNMRFKDPCSDEDQRLFALCAHSCA 1926 Query: 347 TG 348 + Sbjct: 1927 SS 1928 >gi|303283402|ref|XP_003060992.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457343|gb|EEH54642.1| predicted protein [Micromonas pusilla CCMP1545] Length = 512 Score = 44.0 bits (102), Expect = 0.046, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 10/96 (10%) Query: 7 FEGSLHAENVSLE-------KLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 +G+ E+V +E +L V TP A+ +N + ++ L Sbjct: 6 RDGA-WFEDVDVETSFRLPPELEKRVLTPALVVDLDAVRRNVKAVVDVIGDVE-RYRPHL 63 Query: 60 KANSNQAVIKTLAHLGSG-LDIVSEGELRRALAAPV 94 K ++ V + L G + + EL + Sbjct: 64 KTTKSRLVWRELLRAGINKFKVATTRELATLVETYH 99 >gi|221326216|gb|ACM16987.1| arginine decarboxylase [Solanum neorickii] gi|221326218|gb|ACM16988.1| arginine decarboxylase [Solanum neorickii] Length = 222 Score = 44.0 bits (102), Expect = 0.046, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYVAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|303328270|ref|ZP_07358708.1| arginine 2-monooxygenase [Desulfovibrio sp. 3_1_syn3] gi|302861600|gb|EFL84536.1| arginine 2-monooxygenase [Desulfovibrio sp. 3_1_syn3] Length = 638 Score = 44.0 bits (102), Expect = 0.047, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 105/311 (33%), Gaps = 34/311 (10%) Query: 16 VSLEKLA-----HVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 + L ++ P ++ + +F + + +K N Sbjct: 49 IPLPEIIAGLHERGYDMPVLLRVENILDSRITSIHESFRKAIKTLNYTGEYRGVFPIKVN 108 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID----LA 114 Q V++ +A G+ GL++ S+ EL A++ E + K + ID Sbjct: 109 QQQQVVEKIAQFGAHYHHGLEVGSKAELIAAVSLMRDTEACIVCNGYKDAEFIDLGLQAL 168 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 F +E EL L +RA LG + I R + A H S G++ P Sbjct: 169 RLGFNVFFVLEMPGELDVLLERAKVLGVRPNIGVRAKLAVKAGGHWTDSGGERSTFGLSP 228 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + + + H+GSQ+ I L L G + ++ Sbjct: 229 AQIVDVVDTLKAHDMLDCFRLLHYHLGSQVSNIRDIRTGVMEGARLYVGLVQEGAPMGYL 288 Query: 235 DVGGGLGIAYHSDH-RPPSSSDYASLIHQY------------FGNLQCKIILEPGRFLVA 281 D+GGGL + Y H SS +Y + II E GR VA Sbjct: 289 DLGGGLAVDYDGSHTNYISSRNYNLDEYCADVVEAIMSILDEQQVPHPHIITESGRATVA 348 Query: 282 DVGILVTKVIS 292 +L+ ++ Sbjct: 349 YYSVLLFNILD 359 >gi|56377971|dbj|BAD74163.1| arginine decarboxylase [Malus x domestica] Length = 728 Score = 44.0 bits (102), Expect = 0.049, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 23/105 (21%) Query: 16 VSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVC 56 + L K+ V Q P ++ + AFD G Sbjct: 89 IDLLKIVKKVSDSKPECGLGLQLPLIVRLPDVLKDRLESLQGAFDLAIRSHDYGSHYQGV 148 Query: 57 YALKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAE 97 Y +K N ++ V++ + GS GL+ S+ EL A++ Sbjct: 149 YPVKCNQDRFVVEDIVKFGSPFRFGLEAGSKPELLLAMSCLCKGH 193 >gi|218296254|ref|ZP_03497010.1| arginine decarboxylase [Thermus aquaticus Y51MC23] gi|218243326|gb|EED09856.1| arginine decarboxylase [Thermus aquaticus Y51MC23] Length = 630 Score = 44.0 bits (102), Expect = 0.050, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 89/257 (34%), Gaps = 21/257 (8%) Query: 17 SLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANS 63 SL ++ + P +E + AF Y +K N Sbjct: 47 SLLEIVEALRDEGRPLPLVLRFPQILEARVRELNEAFLRAMEKYAYRGGYRGVYPVKVNQ 106 Query: 64 NQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG- 118 + V++T+A G GL+ S+ EL LA + E ++ + K D I LAL Sbjct: 107 RRLVLETVARAGRPYHYGLEAGSKPELALILAQDLSKEALITTNGFKDDDFIRLALMGKK 166 Query: 119 ---IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 +E +EL + + + +G + + R + S G+ Sbjct: 167 LGRNVVITLEKFAELPRVLRLSREVGVRPSLGIRYKLKAKGAGQWEASGGENAKFGLTTP 226 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 + ++ + + HIGSQ+ I A + QLR +++++ Sbjct: 227 EIVKAVEILKEEGLLDTLVMLHAHIGSQVTDIRRIKAAVREAAQTYVQLRKLSAPLRYLN 286 Query: 236 VGGGLGIAYHSDHRPPS 252 +GGGL + Y Sbjct: 287 LGGGLAVDYDGSKTNFY 303 >gi|259417981|ref|ZP_05741900.1| metal-activated pyridoxal enzyme [Silicibacter sp. TrichCH4B] gi|259346887|gb|EEW58701.1| metal-activated pyridoxal enzyme [Silicibacter sp. TrichCH4B] Length = 387 Score = 44.0 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V K LG G+ Sbjct: 25 ADIQTPCLVLDLDALERNIKKMGDYARAHGMRHRVHGKMHKSVDVAKLQESLGGAVGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|221326156|gb|ACM16957.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326158|gb|ACM16958.1| arginine decarboxylase [Solanum pimpinellifolium] Length = 222 Score = 44.0 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + G+G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSVGYEAHYQGVYPVKCNQDRFVVEDIVKFGTGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|221325924|gb|ACM16841.1| arginine decarboxylase [Solanum lycopersicum] gi|221325926|gb|ACM16842.1| arginine decarboxylase [Solanum lycopersicum] gi|221325928|gb|ACM16843.1| arginine decarboxylase [Solanum lycopersicum] gi|221325930|gb|ACM16844.1| arginine decarboxylase [Solanum lycopersicum] gi|221326012|gb|ACM16885.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326014|gb|ACM16886.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326036|gb|ACM16897.1| arginine decarboxylase [Solanum lycopersicum x Solanum pimpinellifolium] gi|221326038|gb|ACM16898.1| arginine decarboxylase [Solanum lycopersicum x Solanum pimpinellifolium] gi|221326040|gb|ACM16899.1| arginine decarboxylase [Solanum lycopersicum] gi|221326042|gb|ACM16900.1| arginine decarboxylase [Solanum lycopersicum] gi|221326048|gb|ACM16903.1| arginine decarboxylase [Solanum lycopersicum] gi|221326052|gb|ACM16905.1| arginine decarboxylase [Solanum lycopersicum] gi|221326054|gb|ACM16906.1| arginine decarboxylase [Solanum lycopersicum] gi|221326056|gb|ACM16907.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326058|gb|ACM16908.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326060|gb|ACM16909.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326062|gb|ACM16910.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326064|gb|ACM16911.1| arginine decarboxylase [Solanum lycopersicum] gi|221326066|gb|ACM16912.1| arginine decarboxylase [Solanum lycopersicum] gi|221326092|gb|ACM16925.1| arginine decarboxylase [Solanum lycopersicum] gi|221326094|gb|ACM16926.1| arginine decarboxylase [Solanum lycopersicum] gi|221326096|gb|ACM16927.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326098|gb|ACM16928.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326100|gb|ACM16929.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326102|gb|ACM16930.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326104|gb|ACM16931.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326106|gb|ACM16932.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326108|gb|ACM16933.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326110|gb|ACM16934.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326112|gb|ACM16935.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326114|gb|ACM16936.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326116|gb|ACM16937.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326118|gb|ACM16938.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326120|gb|ACM16939.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326122|gb|ACM16940.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326124|gb|ACM16941.1| arginine decarboxylase [Solanum galapagense] gi|221326126|gb|ACM16942.1| arginine decarboxylase [Solanum galapagense] gi|221326128|gb|ACM16943.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326130|gb|ACM16944.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326132|gb|ACM16945.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326134|gb|ACM16946.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326148|gb|ACM16953.1| arginine decarboxylase [Solanum galapagense] gi|221326150|gb|ACM16954.1| arginine decarboxylase [Solanum galapagense] gi|221326188|gb|ACM16973.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326190|gb|ACM16974.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326192|gb|ACM16975.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326194|gb|ACM16976.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326208|gb|ACM16983.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326210|gb|ACM16984.1| arginine decarboxylase [Solanum cheesmaniae] gi|221326224|gb|ACM16991.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326226|gb|ACM16992.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326264|gb|ACM17011.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326266|gb|ACM17012.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326304|gb|ACM17031.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326306|gb|ACM17032.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326320|gb|ACM17039.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326322|gb|ACM17040.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326388|gb|ACM17073.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326390|gb|ACM17074.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326392|gb|ACM17075.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326394|gb|ACM17076.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326396|gb|ACM17077.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326398|gb|ACM17078.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326452|gb|ACM17105.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326454|gb|ACM17106.1| arginine decarboxylase [Solanum pimpinellifolium] Length = 222 Score = 44.0 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + G+G Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGTGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|73808446|gb|AAZ85223.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808448|gb|AAZ85224.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808450|gb|AAZ85225.1| arginine decarboxylase [Solanum pimpinellifolium] Length = 448 Score = 44.0 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + G+G Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGTGFR 125 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|59668404|emb|CAI39242.1| arginine decarboxylase [Solanum lycopersicum] Length = 707 Score = 44.0 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + G+G Sbjct: 109 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGTGFR 168 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 169 FGLEAGSKPELLLAMSSLCKGS 190 >gi|6174840|dbj|BAA86032.1| low-specificity D-threonine aldolase [Achromobacter xylosoxidans subsp. xylosoxidans] Length = 377 Score = 44.0 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 27/114 (23%), Gaps = 4/114 (3%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 V TP A E N D + + KA+ + LG+ G+ Sbjct: 22 ARVDTPSLVLDLPAFEANLRAMQAWADRHEVALRPHAKAHKCPEIALRQLALGARGICCQ 81 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 E A + PA S + + + Sbjct: 82 KVSE---ACPSWPPASATSTSATKWSARPSWRCWANWRAPPRSACAWTTPKTWR 132 >gi|116691668|ref|YP_837201.1| alanine racemase domain-containing protein [Burkholderia cenocepacia HI2424] gi|116649668|gb|ABK10308.1| alanine racemase domain protein [Burkholderia cenocepacia HI2424] Length = 375 Score = 43.7 bits (101), Expect = 0.053, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +++N D + +K + V+ G+ G+ + + E Sbjct: 8 TPAALIDIDRMQRNIARMQTHLDALGVRFRPHVKTTKCRHVVDAQIAAGAQGITVSTLKE 67 Query: 86 LRRAL 90 + Sbjct: 68 AEQFF 72 >gi|53803634|ref|YP_114478.1| arginine decarboxylase [Methylococcus capsulatus str. Bath] gi|53757395|gb|AAU91686.1| arginine decarboxylase [Methylococcus capsulatus str. Bath] Length = 625 Score = 43.7 bits (101), Expect = 0.054, Method: Composition-based stats. Identities = 70/308 (22%), Positives = 106/308 (34%), Gaps = 29/308 (9%) Query: 14 ENVSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVC--------YALK 60 VS+ +A V P + ++AF Y +K Sbjct: 44 GGVSIAAIARGVRAEGLSLPVLMRFPHILHDRVRLLTSAFGKARAAYHYGAGYTPVYPIK 103 Query: 61 ANSNQAVIK-TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS-- 117 N + VI+ L G GL+ S+ EL LA I + + L Sbjct: 104 VNQQRNVIENILRAGGVGLEAGSKSELLAILALAESGTIICNGYKDRAYIRLALIGSRLG 163 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 VE SEL+ + + +LG + R+ + + S G+K Sbjct: 164 LRVFIVVEKLSELELVVSESEALGIAPQLGVRIRLSSISAGKWQNSGGEKSKFGLHAGEI 223 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + L + + H+GSQ+ I A + +LR G + H+DVG Sbjct: 224 LKFLKRLERAGGLGWVRLMHFHMGSQVANINDVKTALREASRYYAELRRLGAPVDHVDVG 283 Query: 238 GGLGIAYHSDH------RPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVG 284 GGLGI Y H S +YA I + F L +I E GR + A Sbjct: 284 GGLGIDYEGTHSVSDCSINYSVDEYAHSIVRAFSELCAEQGLPQPDLITEAGRAMSAHHA 343 Query: 285 ILVTKVIS 292 +LVT V+ Sbjct: 344 VLVTNVVD 351 >gi|254488689|ref|ZP_05101894.1| metal-activated pyridoxal enzyme [Roseobacter sp. GAI101] gi|214045558|gb|EEB86196.1| metal-activated pyridoxal enzyme [Roseobacter sp. GAI101] Length = 351 Score = 43.7 bits (101), Expect = 0.057, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 3/67 (4%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI-- 80 + TP E N F D D + +K + + K G+ G+ Sbjct: 5 ELDTPAVLIDLDIAEANIDRFQAHCDAHDLNLRPHIKTHKLPMLAKRQVQAGAIGITCQK 64 Query: 81 VSEGELR 87 VSE E Sbjct: 65 VSEAEAM 71 >gi|218261897|ref|ZP_03476576.1| hypothetical protein PRABACTJOHN_02247 [Parabacteroides johnsonii DSM 18315] gi|218223711|gb|EEC96361.1| hypothetical protein PRABACTJOHN_02247 [Parabacteroides johnsonii DSM 18315] Length = 181 Score = 43.7 bits (101), Expect = 0.058, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 30/119 (25%), Gaps = 1/119 (0%) Query: 34 TTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAP 93 + +N + + + A KA + + S+ E R A Sbjct: 3 EKLLRRNLSLIKSVKEKAGVNIILAFKAFAMWKAFPIVREYIPYSTASSKFEARLAFEEM 62 Query: 94 VPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 +S D ++ S FN ++ E +A + Sbjct: 63 GSRAH-TYSPAYTEADFPEILRYSSHVTFNSLTQFERFYPMVKADGNRVSCGLRINPEY 120 >gi|152992949|ref|YP_001358670.1| arginine decarboxylase [Sulfurovum sp. NBC37-1] gi|151424810|dbj|BAF72313.1| arginine decarboxylase [Sulfurovum sp. NBC37-1] Length = 626 Score = 43.7 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 12/104 (11%) Query: 320 YHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL----PRPGD---LLYIEKTG 372 H ++ A I C++ + NR++ L G L TG Sbjct: 462 QHFPVMPLDRLNTTPTNPASIWDITCDSDGEMGFNRELPLYLHDIDVGKEEYFLAFFLTG 521 Query: 373 AYGAVQSGTYNSRLLIPEIMVN---GSQFHI--IRPRMTFQELI 411 AY V +N E ++N +HI + +++ Sbjct: 522 AYQEVLGMQHNLFTHPTECVINFNEDGGYHIDELIEAQNLMDVL 565 >gi|150376682|ref|YP_001313278.1| alanine racemase domain-containing protein [Sinorhizobium medicae WSM419] gi|150031229|gb|ABR63345.1| alanine racemase domain protein [Sinorhizobium medicae WSM419] Length = 352 Score = 43.7 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 3/72 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI--VSE 83 TP +N L F D V +K + + + G+ G+ V+E Sbjct: 7 TPAVLVDLDIARRNILAFQAYADRHGIRVRPHIKTHKLPQLAELQLDSGAIGITCQKVTE 66 Query: 84 GELRRALAAPVP 95 E +A + Sbjct: 67 AEAMVDGSARIK 78 >gi|62319461|dbj|BAD94828.1| diaminopimelate decarboxylase - like protein [Arabidopsis thaliana] Length = 43 Score = 43.7 bits (101), Expect = 0.060, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 1/34 (2%) Query: 376 AVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQ 408 + TYN ++ PE V IR TF Sbjct: 1 MSMASTYNLKMRPPEYWVEEDGSITKIRHAETFD 34 >gi|254510187|ref|ZP_05122254.1| threonine aldolase, low-specificity [Rhodobacteraceae bacterium KLH11] gi|254512679|ref|ZP_05124745.1| threonine aldolase, low-specificity [Rhodobacteraceae bacterium KLH11] gi|221532678|gb|EEE35673.1| threonine aldolase, low-specificity [Rhodobacteraceae bacterium KLH11] gi|221533898|gb|EEE36886.1| threonine aldolase, low-specificity [Rhodobacteraceae bacterium KLH11] Length = 387 Score = 43.7 bits (101), Expect = 0.061, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + + K + + V K LG G+ Sbjct: 25 ADIQTPCLVLDLDALERNIVKMGDYAKAHGMRHRVHGKMHKSVDVAKLQEKLGGAIGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|84514523|ref|ZP_01001887.1| threonine aldolase, low-specificity [Loktanella vestfoldensis SKA53] gi|84511574|gb|EAQ08027.1| threonine aldolase, low-specificity [Loktanella vestfoldensis SKA53] Length = 387 Score = 43.7 bits (101), Expect = 0.061, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 10/94 (10%) Query: 1 MSAFKYFEGSLHAENVSLEKLA----HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVC 56 M+ L + L +QTP A+E+N + Sbjct: 1 MNDMSSLNN-LDV-GYDIPALPGMDEADIQTPCLVLDLDALERNIKKMGDFAKSHGMRHR 58 Query: 57 YALKANSNQAVIKTLAHLG--SGLDI--VSEGEL 86 K + + V LG G+ VSE E+ Sbjct: 59 VHGKMHKSVDVALLQEKLGGSVGVCCQKVSEAEV 92 >gi|148360017|ref|YP_001251224.1| metal-activated pyridoxal enzyme [Legionella pneumophila str. Corby] gi|296108162|ref|YP_003619863.1| metal-activated pyridoxal enzyme [Legionella pneumophila 2300/99 Alcoy] gi|148281790|gb|ABQ55878.1| metal-activated pyridoxal enzyme [Legionella pneumophila str. Corby] gi|295650064|gb|ADG25911.1| metal-activated pyridoxal enzyme [Legionella pneumophila 2300/99 Alcoy] Length = 397 Score = 43.7 bits (101), Expect = 0.062, Method: Composition-based stats. Identities = 7/63 (11%), Positives = 16/63 (25%), Gaps = 1/63 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 + TP ++ N + K + + + G+ G+ Sbjct: 33 ELDTPCLVIDYEKLKHNLEIMQQHGFTWGIGIRPHCKTHKCTQIARLQLEYGAIGISAAK 92 Query: 83 EGE 85 E Sbjct: 93 LSE 95 >gi|1711492|sp|P49726|SPE1_SOLLC RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC gi|295350|gb|AAA61347.1| arginine decarboxylase [Solanum lycopersicum] Length = 502 Score = 43.7 bits (101), Expect = 0.062, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGS--- 76 P ++ T +AFD Y +K N ++ V++ + GS Sbjct: 2 PLVVRFPDVLKNRLETLQSAFDMAINSQGYEAHYQGVYPVKCNQDRFVVEDIVKFGSPYR 61 Query: 77 -GLDIVSEGELRRALAAPVPAE 97 GL+ S+ EL A+ Sbjct: 62 FGLEAGSKPELLLAMNCLSKGS 83 >gi|126733049|ref|ZP_01748806.1| alanine racemase-like protein [Sagittula stellata E-37] gi|126706495|gb|EBA05575.1| alanine racemase-like protein [Sagittula stellata E-37] Length = 387 Score = 43.7 bits (101), Expect = 0.063, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 VQTP A+E+N + K + + V +G G+ Sbjct: 25 AQVQTPCLVLDLDALERNVRKMGDYAAAHGMRHRVHGKMHKSVDVALLQIEMGGACGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|118361887|ref|XP_001014171.1| hypothetical protein TTHERM_00223420 [Tetrahymena thermophila] gi|89295938|gb|EAR93926.1| hypothetical protein TTHERM_00223420 [Tetrahymena thermophila SB210] Length = 1376 Score = 43.7 bits (101), Expect = 0.063, Method: Composition-based stats. Identities = 24/260 (9%), Positives = 51/260 (19%), Gaps = 10/260 (3%) Query: 91 AAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRV 150 + V + + + + C + K+ + K + Sbjct: 636 CSQTKPSGTYCIPVTQNGNNFEFCQKCDPNCLECNPPGDQKSCISCDIRNQNKYYYKNQC 695 Query: 151 NPDINANTHKKISTGKKEDKFGIPIH-----QIHSLYAYASTLPGVKISGVDMHIGSQID 205 A+T + S + + Sbjct: 696 INSQPASTFCDEKFQCFDCDQNCVSCSNNSKNCQSCKSNIYFYENKCLESPLSGTYCTGY 755 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 S A Q+ + +Y Sbjct: 756 SNCSKCDAQCKT-CEQTSNNCTSCQDQYYLYKNSCQSQKPQGVFCELNQNYYVCSACANL 814 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 N Q + EP + + K +K D + + + + Sbjct: 815 NCQECLKAEPSKCISCPQNYYFYKDDCFQKQIDSKYCEDNKCYDCDPSCSS----CNEPS 870 Query: 326 IVNPAGDRLHIHADIVGPIC 345 N + ++ IVG IC Sbjct: 871 NNNCTYCKSLLNRSIVGNIC 890 >gi|291237608|ref|XP_002738726.1| PREDICTED: neurogenic locus notch homolog protein 2-like, partial [Saccoglossus kowalevskii] Length = 1207 Score = 43.7 bits (101), Expect = 0.065, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 53/279 (18%), Gaps = 11/279 (3%) Query: 78 LDIVSEG-ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 D + + G + E+ Sbjct: 708 CDCPGGYTGIHCEVEINECTSLPCQHGGTCQDEINAYVCTCPPSWMGPNCNIEVNECASN 767 Query: 137 AVSLGKKAPIAFRVNPDINANTHK-KISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 G + I A+ + ++ P + ++ ++G Sbjct: 768 PCQNGGQCNDFIGYYTCICASGFQGINCQINIDECASFPCLNSGTCVDGVNSYACFCVAG 827 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG---------GGLGIAYHS 246 D I + + + Q + + Sbjct: 828 YDGVICQNDIDECASNPCVNEATCVDQLNGYDCQCPPGFTGPRCDQDFDECASQPCQNGA 887 Query: 247 DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 ++ S + + G I E F G ++ A + Sbjct: 888 LCFNLVNAALCSCLAGFTGTFCETNINECLIFHQCQNGATCVDGVNTYSCACQPGWEGTF 947 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 + + G ++ VGP C Sbjct: 948 CEMNVNECQSAPCQNGGTCADVINGFTCTCPSNFVGPTC 986 >gi|237807154|ref|YP_002891594.1| arginine decarboxylase [Tolumonas auensis DSM 9187] gi|259511348|sp|C4L9A9|SPEA_TOLAT RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|237499415|gb|ACQ92008.1| arginine decarboxylase [Tolumonas auensis DSM 9187] Length = 635 Score = 43.7 bits (101), Expect = 0.065, Method: Composition-based stats. Identities = 61/313 (19%), Positives = 102/313 (32%), Gaps = 35/313 (11%) Query: 16 VSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 ++L + TP I+ AF+ Y +K N Sbjct: 44 IALVDIIEQLRKQGYATPVLLRFPDIIKTRINALFGAFEQAIQSYGYKGRYQCVYPIKVN 103 Query: 63 SNQAVIKTLAHL-----GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL---- 113 VI+++ GL+ S+ EL L+ ++ K + + Sbjct: 104 QQNQVIESVTRAFADKPALGLEAGSKPELLAVLSHHHDLGSVIVCNGYKDREYVRHALLG 163 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 +L VE SEL+ + A L I R + + S G+K Sbjct: 164 SLLGHHVYIVVEKPSELELILDEAARLNITPRIGVRARLASQGSGKWQASGGEKSKFGLN 223 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 + + + V H+GSQI I + +LR G NI+ Sbjct: 224 AAQILRLVERLREADKLDCLQLVHFHLGSQIANIRDIQGGIRECGRFYAELRHLGANIEV 283 Query: 234 IDVGGGLGIAYHSDHRPPSS------SDYASLIHQ-------YFGNLQCKIILEPGRFLV 280 +DVGGGLG+ Y +YA+ + F II E GR + Sbjct: 284 VDVGGGLGVDYEGSRSQSHCSANYNLREYANNVVWGIGDVCAEFDLPHPMIISESGRAIT 343 Query: 281 ADVGILVTKVISI 293 A +L++ ++ + Sbjct: 344 AHHAVLISNIVGM 356 >gi|212704456|ref|ZP_03312584.1| hypothetical protein DESPIG_02512 [Desulfovibrio piger ATCC 29098] gi|212672177|gb|EEB32660.1| hypothetical protein DESPIG_02512 [Desulfovibrio piger ATCC 29098] Length = 644 Score = 43.7 bits (101), Expect = 0.065, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 106/311 (34%), Gaps = 34/311 (10%) Query: 16 VSLEKLA-----HVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 +S+ ++ P ++ + +F + +K N Sbjct: 55 ISIPEIISGLRERGYDMPVLLRVENILDSRIASLHESFRKAIKNLNYQGQYRGVFPIKVN 114 Query: 63 SNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 Q V++ +A GS GL++ S+ EL A++ E + K + IDL LQ+ Sbjct: 115 QQQQVVEKIAQFGSRYHHGLEVGSKAELIAAVSLMRDTEACIVCNGYKDEEFIDLGLQAQ 174 Query: 119 IYCFNVESESELKTLNQ----RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 FN+ E+ + R+ LG + I R + A+ H S G++ P Sbjct: 175 RLGFNLFFVLEMPSELDVLLSRSRELGIRPNIGVRAKLSVKASGHWTDSGGERSTFGLSP 234 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + + + H+GSQ+ I L L G + ++ Sbjct: 235 AQIVDVVDKLKACDMLDCFRLLHYHLGSQVSNIRDIRTGVMEGARLYVGLVQEGAPMGYL 294 Query: 235 DVGGGLGIAYHSDHRPP-------------SSSDYASLIHQYFGNLQCKIILEPGRFLVA 281 D+GGGL + Y H + I II E GR VA Sbjct: 295 DLGGGLAVDYDGSHTNYISSRNYNLDEYSADIVEAIMSILDEQQVPHPHIITESGRATVA 354 Query: 282 DVGILVTKVIS 292 +L+ V+ Sbjct: 355 YYSVLLFNVLD 365 >gi|152981283|ref|YP_001351715.1| low-specificity D-threonine aldolase [Janthinobacterium sp. Marseille] gi|151281360|gb|ABR89770.1| low-specificity D-threonine aldolase [Janthinobacterium sp. Marseille] Length = 379 Score = 43.7 bits (101), Expect = 0.065, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 22/67 (32%), Gaps = 3/67 (4%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI- 80 V TP A E N V KA+ + A+ G+ G+ Sbjct: 22 DHVDTPALLVDLDAFEDNLARVHTRVLQAGLKVRSHGKAHKSPAIAHRQLAAGATGICCQ 81 Query: 81 -VSEGEL 86 VSE E+ Sbjct: 82 KVSEAEI 88 >gi|210135195|ref|YP_002301634.1| arginine decarboxylase [Helicobacter pylori P12] gi|210133163|gb|ACJ08154.1| arginine decarboxylase [Helicobacter pylori P12] Length = 615 Score = 43.7 bits (101), Expect = 0.066, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 91/282 (32%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPKAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 A T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 AGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKYHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|126656774|ref|ZP_01727988.1| arginine decarboxylase [Cyanothece sp. CCY0110] gi|126621994|gb|EAZ92702.1| arginine decarboxylase [Cyanothece sp. CCY0110] Length = 664 Score = 43.7 bits (101), Expect = 0.066, Method: Composition-based stats. Identities = 62/311 (19%), Positives = 113/311 (36%), Gaps = 29/311 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCY--------ALKANSNQAVIKTLAHLG---- 75 P + IE ++ F T Y +K N + +++ + + G Sbjct: 95 PLLIHFPDIIEDRIEELNSCFAHAITRYNYEGSYQGVFPIKVNQQRHIVQAIVNCGNNHK 154 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL++ S+ EL ALA + ++ K I+ AL + + E + + Sbjct: 155 YGLEVGSKPELLIALAQLKESNALLICNGYKDQKYIETALLARRLGYQTIVVVEQLSEIK 214 Query: 136 RAVSLGKKAPIA--FRVNPDINANTHKKISTGKKED-KFGIPIHQIHSLYAYASTLPGVK 192 A+ K I + +++ + + KFG+ I +I ++ Sbjct: 215 LAIDTAKTQGIRPVLGIRAKLSSKGDSRWGNSAGDKAKFGLTISEIMEAIEQLKAAEMLE 274 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI I + +A + L G ++++ DVGGGLGI Y H Sbjct: 275 SLQLLHFHIGSQISSIATIKEALTEASQIYVNLSQLGASMKYFDVGGGLGIDYDGSHSHF 334 Query: 252 S------SSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSAD 298 +YA+ + II E GR + + +L+T V+ + K Sbjct: 335 PASKNYSMQNYANDVVAAIKIACETQKLKVPIIISESGRAIASHQSVLLTNVLGVDKIPT 394 Query: 299 KTFVILDVAMN 309 I + Sbjct: 395 FPIDIEKDKCH 405 >gi|332827252|gb|EGK00022.1| hypothetical protein HMPREF9455_03611 [Dysgonomonas gadei ATCC BAA-286] Length = 367 Score = 43.3 bits (100), Expect = 0.068, Method: Composition-based stats. Identities = 26/246 (10%), Positives = 58/246 (23%), Gaps = 6/246 (2%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + +P I++N G + + +K N + V + G Sbjct: 10 IEQIDSPALVVYPERIQENIDLAIQIARGTN-KLRPHVKTNKMREVCAIMLKSGITKYKC 68 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 + E + ++ E + L + + + L Sbjct: 69 ATIAEAEMLA-LVNAPDVLLAYQPVGPKIERLIELIKAYPDTRFSCLVDNEENAKAISDL 127 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 ++ I + D+N + +K I + ++ I D I Sbjct: 128 CRENNITLNIFIDLNIGMDRTGIKPEKAIDLVQAIIDLPRIHIAGLHGYDGHIHDEDTEI 187 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + I A + + I H ++ S + Sbjct: 188 RCKKSDIS---FALAEKAYKEIKPLLPHPIALVMGGTPTFPIHIHRENCECSPGTFVFWD 244 Query: 261 HQYFGN 266 Y Sbjct: 245 WGYKHM 250 >gi|325182550|emb|CCA17005.1| unnamed protein product [Albugo laibachii Nc14] Length = 412 Score = 43.3 bits (100), Expect = 0.068, Method: Composition-based stats. Identities = 28/250 (11%), Positives = 65/250 (26%), Gaps = 13/250 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVC--YALKANSNQAVIKTLAHLG--SGL 78 ++TP A+EKN + + V KA+ A+ + GL Sbjct: 36 RQIETPCLLVDLRALEKNVRFLPESLQRIGAQVHIRPHAKAHKCAAIGRLQIQESQAVGL 95 Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 E + ++ S I + + + + Q+A Sbjct: 96 CCQKVCEAEAMFKGGIK--DLLLSNEIIGIAQYERVAALAAQGAKMTLVFDNMLAIQQAQ 153 Query: 139 SLGKKAPIAFRVNPDINAN-------THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + K + ++N T +++ K + + Sbjct: 154 QVAMKLQVDLHALVEVNVGQDRCGVDTFEQVLDLALCIKDASNLTFDGLQCYHGGAQHIR 213 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 K + I ++ + + + G ++ G+ Sbjct: 214 KYTEKRQVIAKVCEKARTARDFLAEKGLECKTITGGGTGTYLLEASSGVFTEIQPGSYIF 273 Query: 252 SSSDYASLIH 261 + +DYA + Sbjct: 274 NDADYARNWN 283 >gi|109900172|ref|YP_663427.1| arginine decarboxylase [Pseudoalteromonas atlantica T6c] gi|109702453|gb|ABG42373.1| arginine decarboxylase [Pseudoalteromonas atlantica T6c] Length = 642 Score = 43.3 bits (100), Expect = 0.068, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 100/299 (33%), Gaps = 29/299 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGS--- 76 P + + F M Y +K N + V++ + G+ Sbjct: 66 PVVVRFHDILRSQVACLNQTFINTIEEAQYQGKYMGVYPVKVNQMREVVEEIVDAGAPFN 125 Query: 77 -GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIYCFNVESESELK 131 GL+ S+ EL +A + + K + + LA +E SEL Sbjct: 126 YGLEAGSKAELITVMAYNTNIDSLTILNGYKDAEFMRLALLGRKLGRKMIVVIEKYSELS 185 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 L A L I R + + S G + I + S G Sbjct: 186 LLVNAAKQLDVMPIIGLRSKMTVKGRGKWESSGGDRAKFGLTTSEMICAARYLESEGMGE 245 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH------ 245 + + HIGSQ+ I + +A + +L G ++++DVGGGLGI Y Sbjct: 246 CLKLLHFHIGSQLTDIRAVKEAISEGGRIYAELHRMGFKLEYVDVGGGLGIDYDGSKSTN 305 Query: 246 SDHRPPSSSDY-------ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 R + +Y + G ++ E GR + A +V +V+ ++ Sbjct: 306 DSSRNYTMEEYVADVVYGMREVCDLEGVPHPTLVSESGRAITAHHSCVVAQVVGEIRAN 364 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 15/134 (11%), Positives = 41/134 (30%), Gaps = 26/134 (19%) Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET------------- 347 + + ++ T + ++ ++ +V C++ Sbjct: 462 QYLCNFSVFQSAADTWAIDQVLPVVPIARMNEKPTVNCSLVDITCDSDGKLDQFVVEHGI 521 Query: 348 GDFIALNRKIALPRPGD--LLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQ-------F 398 D + + + G+ L + TGAY V +N + E+ + G Sbjct: 522 SDVL----PMPPLKKGEEYYLGLFLTGAYQDVMGDMHNLFGRLNEVHIFGDDDDPEDFYI 577 Query: 399 HIIRPRMTFQELIE 412 + + Q+++ Sbjct: 578 EEMVKGSSVQDVLS 591 >gi|224080476|ref|XP_002306141.1| predicted protein [Populus trichocarpa] gi|222849105|gb|EEE86652.1| predicted protein [Populus trichocarpa] Length = 730 Score = 43.3 bits (100), Expect = 0.070, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 98/300 (32%), Gaps = 29/300 (9%) Query: 16 VSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVC 56 + L K+ V Q P ++ + +AFD Sbjct: 98 IDLLKIVKKVSDPKWVGGLGLQLPVIVRLPDVLKNRLESLQSAFDFAIQSQVYEAHYQGV 157 Query: 57 YALKANSNQAVIKTLAHLGS----GLDIVSEGE--LRRALAAPVPAERIVFSGVGKTIDE 110 Y +K N ++ V++ + GS GL+ S+ E L + E ++ K + Sbjct: 158 YPVKCNQDRFVVEDIVRFGSPFRFGLEAGSKPELLLAMSCLCKGNPEALLICNGFKDGEY 217 Query: 111 IDLALQSG----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK 166 I LAL + +E E E+ + + + + + + R + H ++G+ Sbjct: 218 ISLALIARKLALNTVIVLEQEEEIDLVIELSKKMSVRPVVGVRAKLRTKHSGHFGSTSGE 277 Query: 167 KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 K + + + HIGSQI + +L Sbjct: 278 KGKFGLTTTQILRVVKKLEQAGMLDCFQLLHFHIGSQIPSTSLLADGVSEAAQIYCELVR 337 Query: 227 NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 G +Q ID+GGGLGI Y S A + +Y + + R V I Sbjct: 338 LGARMQVIDIGGGLGIDYDGSKSGNSDLSVAYGLEEYALAVVQAVKFVCDRKNVKHPVIC 397 >gi|168704306|ref|ZP_02736583.1| D-threonine aldolase, metal-activated pyridoxal enzyme [Gemmata obscuriglobus UQM 2246] Length = 373 Score = 43.3 bits (100), Expect = 0.072, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 21/70 (30%), Gaps = 2/70 (2%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 +P + I++N G + +K + ++K L G + E Sbjct: 15 SPALVFFPALIKQNINRVVE-MAGGPARLRPHVKTHKTVEIVKLLLEAGVTKHKCATIAE 73 Query: 86 LRRALAAPVP 95 A P Sbjct: 74 AEMLAHAGAP 83 >gi|317014418|gb|ADU81854.1| arginine decarboxylase [Helicobacter pylori Gambia94/24] Length = 615 Score = 43.3 bits (100), Expect = 0.072, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 87/281 (30%), Gaps = 27/281 (9%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFD---- 49 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSLAIK 74 Query: 50 ----GMDTMVCYALKANSNQA-VIKTL---AHLGSGLDIVSEGELRRALAAPVPAERIVF 101 + LK N + V+ + L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLNYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA-----VSLGKKAPIAFRVNPDINA 156 K + I+L + + E + + P +A Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNDFVACPKIGIRIRLHSA 193 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFK 215 T +G KFG+ ++ + HIGSQI I KA + Sbjct: 194 GTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKALR 253 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +L +LR G + GG ++ H+ +Y Sbjct: 254 EAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLKQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|307306768|ref|ZP_07586509.1| alanine racemase domain protein [Sinorhizobium meliloti BL225C] gi|306902059|gb|EFN32657.1| alanine racemase domain protein [Sinorhizobium meliloti BL225C] Length = 352 Score = 43.3 bits (100), Expect = 0.072, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 3/72 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI--VSE 83 TP +N L F D V +K + + + G+ G+ V+E Sbjct: 7 TPAVLVDLDIARRNVLAFQAYADRHGIRVRPHIKTHKLPQMAELQLDAGAIGITCQKVTE 66 Query: 84 GELRRALAAPVP 95 E A + Sbjct: 67 AEAMVDGGARIK 78 >gi|183178878|gb|ACC43927.1| arginine decarboxylase [Malus hupehensis] Length = 728 Score = 43.3 bits (100), Expect = 0.072, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 98/300 (32%), Gaps = 29/300 (9%) Query: 16 VSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVC 56 + L K+ V Q P ++ + AFD G Sbjct: 89 IDLLKIVKKVSDSKPECGLGLQLPLIVRLPDVLKDRLESLQGAFDLAIRSHDYGSHYQGV 148 Query: 57 YALKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 Y +K N ++ V++ + GS GL+ S+ EL A++ D Sbjct: 149 YPVKCNQDRFVVEDIVKFGSPFRFGLEAGSKPELLLAMSCLCKGNPDALLICNGFKDLEY 208 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK-----K 167 ++L + + L+ + + + + R + A K S + Sbjct: 209 ISLALFARKLALNTVIVLEQEEELDLVVDFSQKLGVRPVIGVRAKLKTKHSGHYGSTSGE 268 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISG-VDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 + KFG+ QI + L + + HIGSQI + +L Sbjct: 269 KGKFGLTTTQILRVVKKLDKLGMLDCFQLLHFHIGSQIPSTALLADGVSEASQIYCELVR 328 Query: 227 NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 G +++ ID+GGGLGI Y S + + +Y + + R V I Sbjct: 329 LGAHMKVIDIGGGLGIDYDGSKSSDSEISVSYGLEEYPSAVVRTVRNVCERRSVKHPVIC 388 >gi|15612027|ref|NP_223679.1| arginine decarboxylase [Helicobacter pylori J99] gi|4155545|gb|AAD06541.1| arginine decarboxylase [Helicobacter pylori J99] Length = 615 Score = 43.3 bits (100), Expect = 0.072, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 87/281 (30%), Gaps = 27/281 (9%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFD---- 49 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVHDKGYRGPLLVRFPHLVQKQIKSLFDAFSLAIK 74 Query: 50 ----GMDTMVCYALKANSNQA-VIKTL---AHLGSGLDIVSEGELRRALAAPVPAERIVF 101 + LK N + V+ + L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLNYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA-----VSLGKKAPIAFRVNPDINA 156 K + I+L + + E + + P +A Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNDFVACPKIGIRIRLHSA 193 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFK 215 T +G KFG+ ++ + HIGSQI I KA + Sbjct: 194 GTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKALR 253 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +L +LR G + GG ++ H+ +Y Sbjct: 254 EAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.9 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNWSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|16264461|ref|NP_437253.1| putative amino acid processing enzyme, low specificity D-threonine aldolase protein [Sinorhizobium meliloti 1021] gi|15140598|emb|CAC49113.1| amino acid aldolase or racemase [Sinorhizobium meliloti 1021] Length = 352 Score = 43.3 bits (100), Expect = 0.072, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 3/72 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI--VSE 83 TP +N L F D V +K + + + G+ G+ V+E Sbjct: 7 TPAVLVDLDIARRNVLAFQAYADRHGIRVRPHIKTHKLPQMAELQLDAGAIGITCQKVTE 66 Query: 84 GELRRALAAPVP 95 E A + Sbjct: 67 AEAMVDGGARIK 78 >gi|313674835|ref|YP_004052831.1| alanine racemase domain protein [Marivirga tractuosa DSM 4126] gi|312941533|gb|ADR20723.1| alanine racemase domain protein [Marivirga tractuosa DSM 4126] Length = 365 Score = 43.3 bits (100), Expect = 0.074, Method: Composition-based stats. Identities = 39/342 (11%), Positives = 73/342 (21%), Gaps = 11/342 (3%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P +KN + + + + K + + V LG VS E+ Sbjct: 6 PTLLLDEKKCKKNIEKMISRANQFNCSLRPHFKTHQSIVVANWFRELGITQCAVSSLEMA 65 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + + V + L I E + L + Sbjct: 66 KYFFNAGWTDITVAFPLNILEHTSVNDLAGKIKLNLCVESLETVKV--LNDFLEHPVGVF 123 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 +++ + + + E G +I Sbjct: 124 LKIDAGYHRTGLDAENFAEIEAILKALESNHLITIKGFLQHAGHTYQAKGKQEIDEIHAY 183 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 S Q N + + RP + Y + + Sbjct: 184 TSKQMINLKEHFNQQYPDLMISNGDTPTCSVSDDFEHLDEMRPGNFVFYDIMQAEIGSCQ 243 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + + +VA ++ I N + N I Sbjct: 244 YEDVAVAMTCPVVAKHADRNEVIVYGGAVHFSKDRIEKDGKNIYGLIADKKENGWGNPIA 303 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 +L E G + + GDLLYI Sbjct: 304 GWFVKKLSQ---------EHGTIHVPDEAFDQIKIGDLLYIL 336 >gi|17547428|ref|NP_520830.1| hypothetical protein RSc2709 [Ralstonia solanacearum GMI1000] gi|17429731|emb|CAD16416.1| putative ipr001608 alanine racemase, n-terminal protein [Ralstonia solanacearum GMI1000] Length = 376 Score = 43.3 bits (100), Expect = 0.075, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + +N D + +K + V++ G+ G+ + + E Sbjct: 8 TPAALIDVARMTRNIERMQQRLDALGVRFRPHVKTTKCEPVVRAQLAAGAQGITVSTLKE 67 Query: 86 LRRALAA 92 + +A Sbjct: 68 AEQFFSA 74 >gi|208434905|ref|YP_002266571.1| arginine decarboxylase [Helicobacter pylori G27] gi|208432834|gb|ACI27705.1| arginine decarboxylase [Helicobacter pylori G27] Length = 615 Score = 43.3 bits (100), Expect = 0.077, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 88/281 (31%), Gaps = 27/281 (9%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFD---- 49 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSLAIK 74 Query: 50 ----GMDTMVCYALKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 + LK N + +++ L GL+ S+ EL + + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPKAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA-----VSLGKKAPIAFRVNPDINA 156 K + I+L + + E + + P +A Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNDFVACPKIGIRIRLHSA 193 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFK 215 T +G KFG+ ++ + HIGSQI I KA + Sbjct: 194 GTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKALR 253 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +L +LR G + GG ++ H+ +Y Sbjct: 254 EAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|108563397|ref|YP_627713.1| arginine decarboxylase [Helicobacter pylori HPAG1] gi|107837170|gb|ABF85039.1| arginine decarboxylase [Helicobacter pylori HPAG1] Length = 615 Score = 43.3 bits (100), Expect = 0.077, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 89/281 (31%), Gaps = 27/281 (9%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPKAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA-----VSLGKKAPIAFRVNPDINA 156 K + I+L + + E + + P +A Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNDFVACPKIGIRIRLHSA 193 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFK 215 T +G KFG+ ++ + HIGSQI I KA + Sbjct: 194 GTGVWAKSGGINSKFGLSSTEVLEAIRLLEENDLLEHFHMIHFHIGSQISDISPLKKALR 253 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +L +LR G + GG ++ H+ +Y Sbjct: 254 EAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|309779212|ref|ZP_07673975.1| alanine racemase, N- domain protein [Ralstonia sp. 5_7_47FAA] gi|308922016|gb|EFP67650.1| alanine racemase, N- domain protein [Ralstonia sp. 5_7_47FAA] Length = 382 Score = 43.3 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 1/72 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + TP ++ N + + + +K V++ G+ G+ + Sbjct: 8 IDTIDTPAALIDLPRMQHNIARMQHRMNALGVKFRPHVKTTKCLDVVRAQVAAGAQGITV 67 Query: 81 VSEGELRRALAA 92 + E AA Sbjct: 68 STLKEAEAFFAA 79 >gi|308184772|ref|YP_003928905.1| arginine decarboxylase [Helicobacter pylori SJM180] gi|308060692|gb|ADO02588.1| arginine decarboxylase [Helicobacter pylori SJM180] Length = 615 Score = 43.3 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 87/281 (30%), Gaps = 27/281 (9%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFD---- 49 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSLAIK 74 Query: 50 ----GMDTMVCYALKANSNQA-VIKTL---AHLGSGLDIVSEGELRRALAAPVPAERIVF 101 + LK N + V+ + L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA-----VSLGKKAPIAFRVNPDINA 156 K + I+L + + E + + P +A Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNDFVACPKIGIRIRLHSA 193 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFK 215 T +G KFG+ ++ + HIGSQI I KA + Sbjct: 194 GTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKALR 253 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +L +LR G + GG ++ H+ +Y Sbjct: 254 EAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDVDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|254454116|ref|ZP_05067553.1| threonine aldolase, low-specificity [Octadecabacter antarcticus 238] gi|198268522|gb|EDY92792.1| threonine aldolase, low-specificity [Octadecabacter antarcticus 238] Length = 387 Score = 43.3 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 8/76 (10%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + + QTP A+E+N + K + + V+K + Sbjct: 21 GMDETDI----QTPCLILDLDALERNVKKMGDYAKAHGMRHRAHGKMHKSVDVLKLQQDM 76 Query: 75 GS--GLDI--VSEGEL 86 G+ G+ VSE E+ Sbjct: 77 GAAIGVCCQKVSEAEV 92 >gi|302880538|ref|XP_003039212.1| hypothetical protein NECHADRAFT_56564 [Nectria haematococca mpVI 77-13-4] gi|256720014|gb|EEU33499.1| hypothetical protein NECHADRAFT_56564 [Nectria haematococca mpVI 77-13-4] Length = 386 Score = 43.3 bits (100), Expect = 0.080, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 19/75 (25%), Gaps = 6/75 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M A + TP + ++KN + + +K Sbjct: 1 MDY-SLENQKAFIGKP-----ASELPTPAFVVRLPVLQKNIKNLHRNVENLGISFRPHVK 54 Query: 61 ANSNQAVIKTLAHLG 75 + V + + G Sbjct: 55 TLKSIEVTRLMLGEG 69 >gi|296536540|ref|ZP_06898627.1| threonine aldolase [Roseomonas cervicalis ATCC 49957] gi|296263136|gb|EFH09674.1| threonine aldolase [Roseomonas cervicalis ATCC 49957] Length = 368 Score = 43.3 bits (100), Expect = 0.080, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 20/74 (27%), Gaps = 1/74 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIV 81 V TP A E N + + K + + V ++ + G + Sbjct: 14 EEVDTPALILDLDAFEANLDAMAAFLAPTGAKLRAHAKTHKSPVVALQQMRRGAVGQCVQ 73 Query: 82 SEGELRRALAAPVP 95 E VP Sbjct: 74 KVAEAEALAWGGVP 87 >gi|256848377|ref|ZP_05553820.1| alanine racemase [Lactobacillus coleohominis 101-4-CHN] gi|256714975|gb|EEU29953.1| alanine racemase [Lactobacillus coleohominis 101-4-CHN] Length = 378 Score = 43.3 bits (100), Expect = 0.082, Method: Composition-based stats. Identities = 34/320 (10%), Positives = 72/320 (22%), Gaps = 22/320 (6%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKA----NSNQAVIKTLAHLG-SGLDIVSEGE 85 A+ N A + + +KA N V L+ G +G + E Sbjct: 12 VVDLGALRHNIRAQKAALP-AGSHIFGVVKADAYGNGMTQVAHVLSEEGVAGFCVALLDE 70 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 A + +V + + +V+ E + + Q + Sbjct: 71 GFTLRNAGLQETILVLGITPVQYAPLAAENGISLTVGSVDWLKEYQQVAQTNHV-RQPLK 129 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 + ++ + + ++ K+ + Sbjct: 130 VHLGLDTGMGRIGFQDVTEFKQALQLVQTPEFEFE-------------GIFTHFATVDSA 176 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 F + + + + GL + + Sbjct: 177 DKTYFEHQLTKWKQFLAVVDHRPRYVHMANSATGLWHQQDIESNTVRMGISLYGCNPSGR 236 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 LQ L+P L+ + S T+ P Y + Sbjct: 237 ELQPSFELQPVTSLITHATFVKKLHRGESVSYGATYTAQQ-DEWVATLPVGYADGYRREL 295 Query: 326 IVNPAGDRLHIHADIVGPIC 345 + DI+G IC Sbjct: 296 TGYHVLVNGQV-CDILGRIC 314 >gi|158145243|gb|ABW21853.1| putative arginine decarboxylase [Solanum chilense] Length = 448 Score = 43.3 bits (100), Expect = 0.082, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 95/277 (34%), Gaps = 18/277 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGS--- 76 P ++ + +AFD Y +K N ++ V++ + GS Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSDFR 125 Query: 77 -GLDIVSEGELRRALAAPVPA--ERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESE 129 GL+ S+ EL A+++ E ++ K + I LAL + N E E E Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + + + I R + H ++G+K + + + Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLKESGM 245 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI E + +L G ++ ID+GGGLGI Y Sbjct: 246 LDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYDGTKS 305 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 S + Y + + R V I Sbjct: 306 SDSDVSVGYGLQDYASTVVQAVRFVCDRKNVKHPVIC 342 >gi|163797790|ref|ZP_02191736.1| alanine racemase-like protein [alpha proteobacterium BAL199] gi|159176912|gb|EDP61478.1| alanine racemase-like protein [alpha proteobacterium BAL199] Length = 379 Score = 43.3 bits (100), Expect = 0.083, Method: Composition-based stats. Identities = 26/239 (10%), Positives = 59/239 (24%), Gaps = 2/239 (0%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI 80 L + TP +E N + + K + V++ G + Sbjct: 2 LIRDLPTPHLVLDRRKLEHNLARMRGRASELGVRLRPHGKTAKSAEVVRRAVGDGPVMVT 61 Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 VS LR A R + + + A N+ ++ + V Sbjct: 62 VST--LREAGYFAENGIRDIVHANCIAPNRLPEAAALLRDGVNLAITTDSPAVAAEIVRA 119 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 G++ + F V +++ H+ + + L + Sbjct: 120 GREFGVRFAVMIEVDVGEHRGGVAAESDALLATARTLHDGGMEVRGVLAHAGHTYGCTDA 179 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 + E+ ++ + G L + + Y + Sbjct: 180 AAVAVIAEAERAGAVRAAQRVREAGIPCREVSVGSTPGALFAKHLNGVTEFRPGVYMFM 238 >gi|83816534|ref|YP_446532.1| metal-activated pyridoxal enzyme [Salinibacter ruber DSM 13855] gi|83757928|gb|ABC46041.1| metal-activated pyridoxal enzyme [Salinibacter ruber DSM 13855] Length = 388 Score = 43.3 bits (100), Expect = 0.083, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + +++N D D + +K + + A+ + G+ GL + + E Sbjct: 8 TPALLIEQSRLQENLAAMQATADANDVTLRPHVKTHKSVAIAEQQQQRGAEGLTVATVHE 67 Query: 86 LRRALAAPVP 95 +AA Sbjct: 68 AETFVAAGFD 77 >gi|317405225|gb|EFV85564.1| pyridoxal phosphate binding aldolase [Achromobacter xylosoxidans C54] Length = 382 Score = 43.3 bits (100), Expect = 0.084, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 1/71 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIV 81 + TP T + +N + G + LK + V + + G + Sbjct: 9 DTLDTPCLLLDETRMTRNIERLNRLMAGHGVQLRPHLKTPKSIEVARRVMARPEGPAAVS 68 Query: 82 SEGELRRALAA 92 + E + AA Sbjct: 69 TLQEAEQFAAA 79 >gi|170745253|ref|YP_001766710.1| alanine racemase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170658854|gb|ACB27908.1| alanine racemase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 393 Score = 43.3 bits (100), Expect = 0.084, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 18/57 (31%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 QTP + N D + + LK + V + +G +VS Sbjct: 23 QTPCLLLDEARLRANLAGMRAHLDRLGVTLRPHLKTAKSIDVARLAMAGPAGPAMVS 79 >gi|257453160|ref|ZP_05618459.1| Serine racemase [Fusobacterium sp. 3_1_5R] gi|317059695|ref|ZP_07924180.1| serine racemase [Fusobacterium sp. 3_1_5R] gi|313685371|gb|EFS22206.1| serine racemase [Fusobacterium sp. 3_1_5R] Length = 369 Score = 43.3 bits (100), Expect = 0.085, Method: Composition-based stats. Identities = 35/347 (10%), Positives = 88/347 (25%), Gaps = 21/347 (6%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 ++TP + ++ N + + + +K + ++ +++ G+ G Sbjct: 4 EDLKTPTILLNIGVLKDNIHRYQKLCNQYGKELWPMIKTHKSKGILEIQIEEGASGALCG 63 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 + E V + K + + L S Y E ++ + Sbjct: 64 TLEEAEMCQKMGVKKIMYAYPVSTKENIQRVIELASKSYFIIRLDNEEG---AKKINEMA 120 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 K + +++ H+ + F + Q +L + + Sbjct: 121 IKEDVIINYTIIVDSGLHRFGVSVDNILGFAEKLKQFQNLKFVGISSHPGHVYSSTCSKD 180 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + K + + ++ + + H + +Y L Sbjct: 181 IEKYVEDECDTLHK-AKSILEEAGYSIKYVTTGSTPTFDEAVKHPEINVYHPGNYVFLDS 239 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + K E V I + A + LD + Y Sbjct: 240 IQLSIGKAKK--ENCALTVYSSIISHPQEDLFICDAGAKCLGLDQGAHGNNSIIGYGTII 297 Query: 322 EINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368 + +V + + G + GD + I Sbjct: 298 DHPELVIVSLSEEVGKIKVTGQT--------------DLKVGDKIEI 330 >gi|221326020|gb|ACM16889.1| arginine decarboxylase [Solanum pimpinellifolium] gi|221326022|gb|ACM16890.1| arginine decarboxylase [Solanum pimpinellifolium] Length = 222 Score = 43.3 bits (100), Expect = 0.086, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGS--- 76 P ++ + +AFD Y +K N ++ V++ + GS Sbjct: 45 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGLR 104 Query: 77 -GLDIVSEGELRRALAAPVPAE 97 GL+ S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|73808442|gb|AAZ85221.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808444|gb|AAZ85222.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808454|gb|AAZ85227.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808456|gb|AAZ85228.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808458|gb|AAZ85229.1| arginine decarboxylase [Solanum pimpinellifolium] gi|73808460|gb|AAZ85230.1| arginine decarboxylase [Solanum pimpinellifolium] Length = 448 Score = 43.3 bits (100), Expect = 0.086, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGS--- 76 P ++ + +AFD Y +K N ++ V++ + GS Sbjct: 66 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGLR 125 Query: 77 -GLDIVSEGELRRALAAPVPAE 97 GL+ S+ EL A+++ Sbjct: 126 FGLEAGSKPELLLAMSSLCKGS 147 >gi|255656805|ref|ZP_05402214.1| putative amino acid racemase [Clostridium difficile QCD-23m63] gi|296452364|ref|ZP_06894066.1| serine racemase [Clostridium difficile NAP08] gi|296877713|ref|ZP_06901741.1| serine racemase [Clostridium difficile NAP07] gi|296258793|gb|EFH05686.1| serine racemase [Clostridium difficile NAP08] gi|296431335|gb|EFH17154.1| serine racemase [Clostridium difficile NAP07] Length = 370 Score = 43.3 bits (100), Expect = 0.087, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP + +EKN + + LK + + + + + G+ G + + Sbjct: 5 EVSTPNFLLDLDQLEKNIDKIQQICTNNNKQLWPMLKTHKSTYIARLQKNAGASGFLVGT 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 E + A + + +G+ + + S I E Sbjct: 65 LDEGEALIKAGFEDIMLAYPYMGEVNINRIVTMASKINLICATDNIECAK 114 >gi|296124022|ref|YP_003631800.1| arginine decarboxylase [Planctomyces limnophilus DSM 3776] gi|296016362|gb|ADG69601.1| arginine decarboxylase [Planctomyces limnophilus DSM 3776] Length = 636 Score = 43.3 bits (100), Expect = 0.087, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 80/258 (31%), Gaps = 22/258 (8%) Query: 16 VSLEKLA------HVVQTPFYCYSTTAIEKNYLTFS----NAFDGMDTM----VCYALKA 61 + L +L + TP + + A + + +K Sbjct: 45 LDLFELVNSLRDERKLHTPLLLRFPQILTNQLKKLATSYIQAIEEYGYQGRHFPVFPMKV 104 Query: 62 NSNQAVIKTL----AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLAL-- 115 N + V++ A GL+ S+ EL LA ++ K I LA+ Sbjct: 105 NPRREVVEEFLKDSARFNVGLECGSKPELYAGLAQVQHPNSLLICNGFKDDSFIRLAMLG 164 Query: 116 --QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 +E SEL T A G I R + S G Sbjct: 165 VEAGKNVVIVIEKLSELITTLNLADETGVMPMIGLRSKLYSRGSGKWASSGGDSAKFGLT 224 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 + + + + HIGSQI +I+ A K + +LR G I Sbjct: 225 TSELLDCVRLLKDRGRLSSLKLLHSHIGSQITEIKRVKMAMKEAARVYAKLRQLGTPIDT 284 Query: 234 IDVGGGLGIAYHSDHRPP 251 +D+GGGLG+ Y Sbjct: 285 MDIGGGLGVDYDGSKTRF 302 >gi|257484843|ref|ZP_05638884.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 221 Score = 43.3 bits (100), Expect = 0.088, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 28/76 (36%), Gaps = 1/76 (1%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 +S+ L + TP +++N + + + + +K + VI+ G Sbjct: 1 MSMSALLSSLDTPVALLDVPRMQRNIQRMQHRINELGVRLRPHVKTSKCLPVIQAQIAAG 60 Query: 76 S-GLDIVSEGELRRAL 90 + G+ + + E Sbjct: 61 ASGVTVSTLKEAEHCF 76 >gi|254249069|ref|ZP_04942389.1| Alanine racemase [Burkholderia cenocepacia PC184] gi|124875570|gb|EAY65560.1| Alanine racemase [Burkholderia cenocepacia PC184] Length = 376 Score = 43.3 bits (100), Expect = 0.088, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +++N D + +K + V+ G+ G+ + + E Sbjct: 8 TPAALIDVARMQRNIARMQTHLDALGVRFRPHVKTTKCRQVVDVQIAAGAQGITVSTLKE 67 Query: 86 LRRAL 90 + Sbjct: 68 AEQFF 72 >gi|124024772|ref|YP_001013888.1| arginine decarboxylase [Prochlorococcus marinus str. NATL1A] gi|123959840|gb|ABM74623.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str. NATL1A] Length = 647 Score = 42.9 bits (99), Expect = 0.090, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 90/253 (35%), Gaps = 21/253 (8%) Query: 17 SLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANS 63 L +L +++ P +E AF+ + +K N Sbjct: 52 DLIELLDELESRKLKFPLLIRFDDILEDCLKNLHKAFEKAINDYQYEGKYQGVFPIKCNQ 111 Query: 64 NQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----L 115 + V++ L GS GL+ S+ EL L+ + ++ K I+ A Sbjct: 112 QRHVVEELITCGSKWNFGLEAGSKPELLIGLSILENPKALLICNGYKDQRYIETAILARQ 171 Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 +E ++++ + + + LG I R ++ S G K Sbjct: 172 LGRQPIVVIEQANDVELIIKSSDLLGASPLIGIRAKLSSQSSGRWSSSIGDKSKFGLSIP 231 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 + ++ ++ + H+GSQI+ I A + + +L + G + ++D Sbjct: 232 EILKTIKRLKEANLLNELKLLHFHLGSQINDIGVLKDALQEAGQIYAELINLGAPMGYLD 291 Query: 236 VGGGLGIAYHSDH 248 VGGGLGI Y Sbjct: 292 VGGGLGIDYDGSQ 304 >gi|299065741|emb|CBJ36917.1| conserved protein of unknown function, Alanine racemase domain protein [Ralstonia solanacearum CMR15] Length = 376 Score = 42.9 bits (99), Expect = 0.092, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + +N D + +K + V++ G+ G+ + + E Sbjct: 8 TPAALIDVARMTRNIERMQQRLDALGVRFRPHVKTTKCEPVVRAQLAAGAQGITVSTLKE 67 Query: 86 LRRALAA 92 + AA Sbjct: 68 AEQFFAA 74 >gi|254441228|ref|ZP_05054721.1| hypothetical protein OA307_643 [Octadecabacter antarcticus 307] gi|198251306|gb|EDY75621.1| hypothetical protein OA307_643 [Octadecabacter antarcticus 307] Length = 69 Score = 42.9 bits (99), Expect = 0.092, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 5/69 (7%) Query: 329 PAGDRLHIHADIVGPICETGDFIALNRKIALP---RPGDLLYIEKTGAYGAVQSG-TYNS 384 D P C++ D + + + LP + GD + A+ + S +N Sbjct: 1 MHDDDPVAPCVFAAPPCDSADVLYEKQPMLLPVTLKAGDGIVNRNCDAHTSSYSSVGFNG 60 Query: 385 RLLIPEIMV 393 +++V Sbjct: 61 FP-PLDVLV 68 >gi|52842730|ref|YP_096529.1| metal-activated pyridoxal enzyme [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629841|gb|AAU28582.1| metal-activated pyridoxal enzyme [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 384 Score = 42.9 bits (99), Expect = 0.092, Method: Composition-based stats. Identities = 43/374 (11%), Positives = 93/374 (24%), Gaps = 36/374 (9%) Query: 1 MSA-FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59 M+ Y + L K+ + TP ++ N + Sbjct: 1 MNFVMNYLMKEKYIG---LHKI--ELNTPCLVIDYEKLKYNLKVMQQHGFEWGIGIRPHC 55 Query: 60 KANSNQAVIKTLAHLGS-GLDIV--SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 K + + + G+ G+ SE E+ + K + Sbjct: 56 KTHKCTQIARLQLEYGAIGISAAKLSEAEVLVSKQITNVLITSPIVSEAKYSRLFNCLKS 115 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 + V+ + ++ LN+ SL + + ++ I + Sbjct: 116 APDLMLVVDGKDNIRMLNELGKSLNQPVYVLLDIDSGIGRTGINPEVALEYGHFINS--- 172 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L I H+ + E + +++ ++ ++S ++ Sbjct: 173 --------MNWLKLKGIQCYAGHLQHIQNYEERKAFSLRIMDMASRIVKSFRDANLPCEI 224 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILE----PGRFLVADVGILVTKVIS 292 G G S +++ I + L+T VIS Sbjct: 225 LTGTGTGTFDIDVEASEVTEIQPGSYAVMDVEYGSIGSKNNPSSFQPFKNSMTLLTSVIS 284 Query: 293 IKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + T ++ + H H CE G Sbjct: 285 SNRKEHATVDAGTKSIYVDPHHKPHIISHPGLVYDWGGFGDEHGKVF----SCEGGSHF- 339 Query: 353 LNRKIALPRPGDLL 366 + GD+L Sbjct: 340 -------LQNGDVL 346 >gi|330869029|gb|EGH03738.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 378 Score = 42.9 bits (99), Expect = 0.094, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 25/73 (34%), Gaps = 1/73 (1%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-G 77 L + TP +++N + + + + +K + VI+ G+ G Sbjct: 2 SALLSSLDTPVALLDVPRMQRNIQRMQHRMNELGVRLRPHVKTSKCLPVIQAQIAAGASG 61 Query: 78 LDIVSEGELRRAL 90 + + + E Sbjct: 62 VTVSTLKEAEHCF 74 >gi|86604858|ref|YP_473621.1| arginine decarboxylase [Synechococcus sp. JA-3-3Ab] gi|86553400|gb|ABC98358.1| arginine decarboxylase [Synechococcus sp. JA-3-3Ab] Length = 641 Score = 42.9 bits (99), Expect = 0.094, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 83/256 (32%), Gaps = 21/256 (8%) Query: 14 ENVSL----EKLAHV-VQTPFYCYSTTAIEKNYLT----FSNAFDGMDT----MVCYALK 60 + L L +Q P + F A + Y +K Sbjct: 48 GGIDLYHLVTDLVARGLQLPLLIRFPEIVADRMRRICESFQQAIERFGYPNVYRGVYPVK 107 Query: 61 ANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA-- 114 N + +++ + G GL+ S+ EL ALA ++ K D ++ A Sbjct: 108 VNQQRHLVEEVVKHGRAYHFGLEAGSKPELLIALALLDTPGALLICNGYKDRDFMETALL 167 Query: 115 --LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFG 172 +E EL+ + Q A LG + R + S G + Sbjct: 168 AQRLGRTPIIVLERLQELELVLQAAEHLGIDPLLGVRAKLSAQGSGRWGTSAGDRGKFGL 227 Query: 173 IPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQ 232 + + + + HIGSQI + +A + + +L G + Sbjct: 228 TATEMLQVVERLREVGKLHCLRLLHYHIGSQISMVSVHGRAVREASQIYIELVKLGAPMG 287 Query: 233 HIDVGGGLGIAYHSDH 248 ++DVGGGLG+ Y Sbjct: 288 YLDVGGGLGVDYDGSQ 303 >gi|298487772|ref|ZP_07005813.1| alanine racemase, N-terminal domain family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157864|gb|EFH98943.1| alanine racemase, N-terminal domain family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 378 Score = 42.9 bits (99), Expect = 0.096, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 25/73 (34%), Gaps = 1/73 (1%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-G 77 L + TP +++N + + + + +K + VI+ G+ G Sbjct: 2 SALLSSLDTPVALLDVPRMQRNIQRMQHRMNELGVRLRPHVKTSKCLPVIQAQIAAGASG 61 Query: 78 LDIVSEGELRRAL 90 + + + E Sbjct: 62 VTVSTLKEAEHCF 74 >gi|289646519|ref|ZP_06477862.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 378 Score = 42.9 bits (99), Expect = 0.096, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 25/73 (34%), Gaps = 1/73 (1%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-G 77 L + TP +++N + + + + +K + VI+ G+ G Sbjct: 2 SALLSSLDTPVALLDVPRMQRNIQRMQHRMNELGVRLRPHVKTSKCLPVIQAQIAAGASG 61 Query: 78 LDIVSEGELRRAL 90 + + + E Sbjct: 62 VTVSTLKEAEHCF 74 >gi|307942316|ref|ZP_07657667.1| alanine racemase [Roseibium sp. TrichSKD4] gi|307774602|gb|EFO33812.1| alanine racemase [Roseibium sp. TrichSKD4] Length = 382 Score = 42.9 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 23/60 (38%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP + +N ++ D + + LK + V + L G+G VS Sbjct: 9 KNLQTPALILDEAKMMRNIRRLASQVDSLGVSLRPHLKTVKSIEVARRLLTDGTGPATVS 68 >gi|295680721|ref|YP_003609295.1| alanine racemase domain protein [Burkholderia sp. CCGE1002] gi|295440616|gb|ADG19784.1| alanine racemase domain protein [Burkholderia sp. CCGE1002] Length = 376 Score = 42.9 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 18/65 (27%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIVSEGE 85 TP + N D + +K + V+ G G+ + + E Sbjct: 8 TPAALIDVARMRHNIDNMQARLDKLGARFRPHVKTTKCKQVVDAQVAAGACGITVSTLKE 67 Query: 86 LRRAL 90 + Sbjct: 68 AEQFF 72 >gi|302767296|ref|XP_002967068.1| hypothetical protein SELMODRAFT_408444 [Selaginella moellendorffii] gi|300165059|gb|EFJ31667.1| hypothetical protein SELMODRAFT_408444 [Selaginella moellendorffii] Length = 2121 Score = 42.9 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 28/237 (11%), Positives = 54/237 (22%), Gaps = 20/237 (8%) Query: 60 KANSNQAVIKTLAHLGSGLD--IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117 K NS Q + K G D VS EL L A + + A Sbjct: 1556 KCNSRQHMCKE-KCQLPGCDNICVSPSELDHKLHACHEKMCPTPCCMPGCHRKCATADHF 1614 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 ++ E + Q A + + K + K +F Sbjct: 1615 HSMKSGIQHFCESEHPCQEACQSPGICDV-------VTEVVKKTKTFVGKRSQFEYEHVS 1667 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + +P + + H + ++ Sbjct: 1668 EQNGVRKGCCVPVPAFNNTHAGPHIHTTNPSAIHFCPVRCQG----------CGYFCNLA 1717 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 G + + H + +AS + + E G + + + Sbjct: 1718 IGHRGLHDTTHGNMTDKFFASETEEVDILDRKYSWGESGAAEMCMMHCKARGRGHVH 1774 >gi|188586547|ref|YP_001918092.1| alanine racemase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351234|gb|ACB85504.1| alanine racemase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 362 Score = 42.9 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 7/78 (8%) Query: 13 AENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 + LE L TP + +E N ++ F + +K + N + Sbjct: 6 VSGLKLENL----PTPALLLDMSNLEYNINLLADFFRDKPCDIRPHMKGHKNLTIAHMQI 61 Query: 73 HLGS-GLDIV--SEGELR 87 G+ G+ SE E+ Sbjct: 62 DRGAIGVTCAKTSEAEVM 79 >gi|317486181|ref|ZP_07945020.1| arginine decarboxylase [Bilophila wadsworthia 3_1_6] gi|316922572|gb|EFV43819.1| arginine decarboxylase [Bilophila wadsworthia 3_1_6] Length = 640 Score = 42.9 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 80/243 (32%), Gaps = 16/243 (6%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGS 76 P ++ +F + + +K N Q ++ +A GS Sbjct: 64 YDMPVLLRIENILDSQITLLHESFRKAIASLGYKGEYRGVFPIKVNQQQHTVEKIAQFGS 123 Query: 77 ----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 GL++ S+ EL A++ E + K + IDL L + F E+ Sbjct: 124 RFHHGLEVGSKAELISAISQLKDPEACLICNGYKDEEFIDLGLSAVRMGFKCIFVMEMPG 183 Query: 133 LNQRAVSLGKKAPIAFRVNPDINA---NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + + + + + + FG+ Q+ + Sbjct: 184 ELELILERSAALGVRPLLGVRVKLITKGSGHWAGSCGERSAFGLTTAQVVDIVDTLKQHD 243 Query: 190 GVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 + + + H+GSQ+ I A + L G + ++D+GGGL + Y H Sbjct: 244 MLDCLQLLHYHLGSQVPNIRDIRTAVMESTRVYAGLVQEGAKMGYLDLGGGLAVDYDGSH 303 Query: 249 RPP 251 Sbjct: 304 TNY 306 >gi|297526616|ref|YP_003668640.1| Orn/DAP/Arg decarboxylase 2 [Staphylothermus hellenicus DSM 12710] gi|297255532|gb|ADI31741.1| Orn/DAP/Arg decarboxylase 2 [Staphylothermus hellenicus DSM 12710] Length = 589 Score = 42.9 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 100/273 (36%), Gaps = 21/273 (7%) Query: 41 YLTFSNAFDGMDT----MVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAA 92 Y F AF Y LK+NS V+ T+ G G + + E++ Sbjct: 70 YEAFMEAFRKFGYEGEFKPVYPLKSNSTTIVVDTIWQYGVKYNWGFNAGTYPEIKLLSKY 129 Query: 93 PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 R++ K +DL ++ + ++ + + + +V Sbjct: 130 TNKKPRLLVVDGIKDNKILDLLVKMNDNWEIIVDIESMRDADLLSKYRDLNIGLRIKV-- 187 Query: 153 DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK 212 ++ ++ + + KFG+ I+ + + +PG + + +H GSQI Sbjct: 188 -VSKSSGLWSHSSGLDSKFGLLINTLDEIIKEHPWIPGRTV-LLHVHAGSQITDKNKLEN 245 Query: 213 AFKLLRDLTQQLRSN-GHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF------- 264 + L L + NI++ID GGGL Y SS+Y+ + Sbjct: 246 IIRETITLYNSLVNTGFKNIRYIDFGGGLAYPYVEASDHMFSSNYSLNEYAEILVKEVVE 305 Query: 265 -GNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 I+ E GR++VA I VTK+I + Sbjct: 306 SAENIPGIVFEGGRYIVAPHRITVTKIIDTRPY 338 >gi|332285912|ref|YP_004417823.1| alanine racemase-like protein [Pusillimonas sp. T7-7] gi|330429865|gb|AEC21199.1| alanine racemase-like protein [Pusillimonas sp. T7-7] Length = 388 Score = 42.9 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 1/132 (0%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 + ++TP + +E+N + D ++ LK N + V + + + + + + Sbjct: 14 NELETPALVLDSVIMEQNIKRLRDRLSRFDVVLRPHLKTNKSADVSRRIGGPETPITVST 73 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT-LNQRAVSLG 141 E L + +Q G V +E L Q Sbjct: 74 LKEAEYFLEHGWHDILYAVGIAKNKFAHVVRLMQKGARLTVVLDNTESARALAQFCREQT 133 Query: 142 KKAPIAFRVNPD 153 P+ ++ D Sbjct: 134 LTIPVLIEIDTD 145 >gi|46111149|ref|XP_382632.1| hypothetical protein FG02456.1 [Gibberella zeae PH-1] Length = 585 Score = 42.9 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 25/89 (28%), Gaps = 8/89 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M + L TP + ++KN T + + +K Sbjct: 1 MDY-SLENHKYFIGK-PISDL----PTPALVVNLPVLKKNIDTLHQDVERLGIGFRPHVK 54 Query: 61 ANSNQAVIKTLAHLG--SGLDIVSEGELR 87 + + + G G+ + E++ Sbjct: 55 TLKTLELTRMMIAEGKYKGMIASTIPEIK 83 >gi|300310473|ref|YP_003774565.1| amino acid aldolase or racemase [Herbaspirillum seropedicae SmR1] gi|300073258|gb|ADJ62657.1| amino acid aldolase or racemase protein [Herbaspirillum seropedicae SmR1] Length = 376 Score = 42.9 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 1/68 (1%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEG 84 TP +++N D + +K V++ G+ G+ + + Sbjct: 7 PTPAALIDVARMQRNITRMQQRMDALGVRFRPHVKTTKCNEVVQAQLQAGASGITVSTLK 66 Query: 85 ELRRALAA 92 E + AA Sbjct: 67 EAEQFFAA 74 >gi|321466807|gb|EFX77800.1| hypothetical protein DAPPUDRAFT_213228 [Daphnia pulex] Length = 1583 Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 23/293 (7%), Positives = 46/293 (15%), Gaps = 13/293 (4%) Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 +KAN G + ++ E + Sbjct: 946 IKANKVSHFPP---EGGCFVKCLTPMPCGHTCPKICHVEDREHRRQKCHEACLRSCSVGH 1002 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQI 178 + + + D + T Sbjct: 1003 PCPKRCYQDCNPCLTKIPKILIPCNHTQITECYKDPE---KEYCFTKPCVKIMSCGHQCK 1059 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQI--DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 S L ++ + + H + Q +H Sbjct: 1060 RKCRETCSPLVCQELVRTSKLSPCGHPVMKTCNDHHSCNTFLQECPQKCHANLPCEH-SC 1118 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKS 296 G G ++ + I P V ++ Sbjct: 1119 KGSCGQCFNGRLHKACEEKCGRTLVCGHNCGVNCAISCPPCKEVCQYRCRHSRCRKKCCE 1178 Query: 297 ADKTFVILDVAMNDFMRP----TLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 V + Y + H + G IC Sbjct: 1179 PCVDCVEPCGWKCEHYSCSLKCFEYCNRPRCDEPCRKRLPCGHSCVGLCGEIC 1231 >gi|206562454|ref|YP_002233217.1| putative alanine racemase [Burkholderia cenocepacia J2315] gi|198038494|emb|CAR54452.1| putative alanine racemase [Burkholderia cenocepacia J2315] Length = 376 Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +++N D + +K + V+ G+ G+ + + E Sbjct: 8 TPAALIDVGRMQRNIARMQTHLDALGVRFRPHVKTTKCRHVVDAQIAAGAQGITVSTLKE 67 Query: 86 LRRAL 90 + Sbjct: 68 AEQFF 72 >gi|46199579|ref|YP_005246.1| arginine decarboxylase [Thermus thermophilus HB27] gi|46197205|gb|AAS81619.1| arginine decarboxylase [Thermus thermophilus HB27] Length = 630 Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 90/257 (35%), Gaps = 21/257 (8%) Query: 17 SLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANS 63 SL ++ + P +E + AF Y +K N Sbjct: 47 SLLEIVEALRDEGRPLPLVLRFPQILEARVRALNEAFLEAMAKYGYQGTYRGVYPVKVNQ 106 Query: 64 NQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ--- 116 + V++T+A G GL+ S+ EL LA + E ++ + K D + LAL Sbjct: 107 RRLVLETVARAGRPYHLGLEAGSKPELALILAQDLSEEALITTNGFKDDDFVRLALMGRK 166 Query: 117 -SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 +E +EL + + + LG K + R + S G+ Sbjct: 167 LGRNVVITLEKFAELFRVLRLSKELGVKPLLGIRYKLKAKGAGQWEASGGENAKFGLTTP 226 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 + ++ + + HIGSQ+ I A + QLR G +++++ Sbjct: 227 EIVRAVEVLQEEGLLDALVMLHAHIGSQVTDIRRIKAAVREAAQTYVQLRKLGAPLRYLN 286 Query: 236 VGGGLGIAYHSDHRPPS 252 +GGGL + Y Sbjct: 287 LGGGLAVDYDGSKTNFY 303 >gi|294508466|ref|YP_003572524.1| Alanine racemase [Salinibacter ruber M8] gi|294344794|emb|CBH25572.1| Alanine racemase [Salinibacter ruber M8] Length = 388 Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 1/70 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP ++ N + D + +K + + A+ + G+ GL + + E Sbjct: 8 TPALLIEQARLQANLAAMQATANANDVTLRPHVKTHKSVAIAEQQQQRGATGLTVATVHE 67 Query: 86 LRRALAAPVP 95 +AA Sbjct: 68 AEAFVAAGFD 77 >gi|257871037|ref|ZP_05650690.1| amino acid racemase [Enterococcus gallinarum EG2] gi|257805201|gb|EEV34023.1| amino acid racemase [Enterococcus gallinarum EG2] Length = 384 Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 36/127 (28%), Gaps = 1/127 (0%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLGSGLDIVSEGELRR 88 Y AIE N + + + K N V + + G +V + + Sbjct: 31 YVLDLDAIENNTRLLVESATKNQIELFFMTKQFGRNPYVAQKIHEAGIKKVVVVDYKEAL 90 Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + V V + + G V S + + A LG + I Sbjct: 91 VMMKQGLPLGNVGHLVQIPKHLLKKIMDYGTDYITVFSTEMINNIATVARELGIQQKILL 150 Query: 149 RVNPDIN 155 +V + Sbjct: 151 KVIEPGD 157 >gi|325971327|ref|YP_004247518.1| arginine decarboxylase [Spirochaeta sp. Buddy] gi|324026565|gb|ADY13324.1| arginine decarboxylase [Spirochaeta sp. Buddy] Length = 637 Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 78/235 (33%), Gaps = 16/235 (6%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLG---- 75 P + ++ + +F Y +K N Q V++ + G Sbjct: 61 PVLLRFSNILDDRIQHINESFLNAIKDAGYQGTYRGVYPIKVNQQQQVVEEICKYGQQYH 120 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID----LALQSGIYCFNVESESELK 131 GL+ S+ EL ALA E V K + ID VE E+ Sbjct: 121 HGLETGSKAELIIALAHIDDPEAYVICNGYKDEEYIDLALKGLQLGIQTVLVVEMPGEVG 180 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + QR+ +LG K I R+ P A+ H S G + + + Sbjct: 181 IILQRSRALGIKPNIGLRMKPSTMASGHWTDSGGDRSVFGLNTTQVVQVVDRLRKENMLD 240 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 + + H+GSQI I L G + +D+GGGL I Y Sbjct: 241 CLKLLHYHLGSQIPNIHDIRVGATEAARFYAGLVHEGAAMGLLDMGGGLAIDYDG 295 >gi|110347166|ref|YP_665984.1| D-3-hydroxyaspartate aldolase [Mesorhizobium sp. BNC1] gi|110283277|gb|ABG61337.1| D-3-hydroxyaspartate aldolase [Chelativorans sp. BNC1] Length = 387 Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 4/67 (5%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI- 80 +QTP A+E+N + K + + V K LG G+ Sbjct: 26 QIQTPCLILDLDALERNIRKMGDYAKANGMRHRSHGKMHKSVDVQKLQERLGGSVGVCCQ 85 Query: 81 -VSEGEL 86 VSE E+ Sbjct: 86 KVSEAEV 92 >gi|319647068|ref|ZP_08001294.1| hypothetical protein HMPREF1012_02332 [Bacillus sp. BT1B_CT2] gi|317390892|gb|EFV71693.1| hypothetical protein HMPREF1012_02332 [Bacillus sp. BT1B_CT2] Length = 383 Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLGSGLDIV 81 Y ++KN S D + + K N V + +A G G + Sbjct: 31 YVLDLDTVKKNAKVLSEKARKQDIELFFMTKQFGRNPLVAQAIAESGIGKAVA 83 >gi|52079158|ref|YP_077949.1| putative alanine racemase [Bacillus licheniformis ATCC 14580] gi|52784525|ref|YP_090354.1| hypothetical protein BLi00725 [Bacillus licheniformis ATCC 14580] gi|52002369|gb|AAU22311.1| putative alanine racemase [Bacillus licheniformis ATCC 14580] gi|52347027|gb|AAU39661.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580] Length = 383 Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLGSGLDIV 81 Y ++KN S D + + K N V + +A G G + Sbjct: 31 YVLDLDTVKKNAKVLSEKARKQDIELFFMTKQFGRNPLVAQAIAESGIGKAVA 83 >gi|221195320|ref|ZP_03568376.1| alanine racemase domain protein [Atopobium rimae ATCC 49626] gi|221185223|gb|EEE17614.1| alanine racemase domain protein [Atopobium rimae ATCC 49626] Length = 386 Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 94/343 (27%), Gaps = 27/343 (7%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLG-SGLDIVSEGELR 87 Y ++ +N + + + + LK N + +TL LG +G V E Sbjct: 31 YIVDLDSLIENAQKLKKKANEKNIQLYFMLKQLGRNPLIAQTLDELGYAGAVCVDYREAT 90 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 V V + V + I+ L V S E K + + A LG I Sbjct: 91 TLGENGVR-LGHVGNLVQIPLQSIERILTYRPEIVTVFSREEAKRIGEVAERLGFVQSIM 149 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 +V + G + ++ + + GV I+GV Sbjct: 150 LKVLDTEDVQ--------YSGQSGGFYVDELEQVEQEIAKTSGVHIAGVCSFPCFLFSDQ 201 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + + + + + L + S + L + Sbjct: 202 TNRIETLHNVSTVQKACEYLHSVGY-----DNLQVNLPSQSCTALVDRVSQLQGTHMEPG 256 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 P D+ + V + S + N + + ++ + Sbjct: 257 HGLTGTTPYHAAGNDMDEKTSYVYVSEISHNL-------GSNSYCYGGGFYRRGHLHRAL 309 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKI-ALPRPGDLLYIE 369 + ++ P E+ D+ ++ GD + + Sbjct: 310 VGKREDSAKTCEVNAPTPESIDY---YFELSQNATVGDTVLMC 349 >gi|217032299|ref|ZP_03437796.1| hypothetical protein HPB128_142g47 [Helicobacter pylori B128] gi|298735968|ref|YP_003728493.1| arginine decarboxylase [Helicobacter pylori B8] gi|216946065|gb|EEC24678.1| hypothetical protein HPB128_142g47 [Helicobacter pylori B128] gi|298355157|emb|CBI66029.1| arginine decarboxylase [Helicobacter pylori B8] Length = 615 Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 88/281 (31%), Gaps = 27/281 (9%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLNYGLEAGSKSEL-IIAMSYTNPKAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA-----VSLGKKAPIAFRVNPDINA 156 K + I+L + + E + + P + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNDFVACPKIGIRIRLHST 193 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFK 215 T +G KFG+ ++ + HIGSQI I KA + Sbjct: 194 GTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKALR 253 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +L +LR G + GG ++ H+ +Y Sbjct: 254 EAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|196004634|ref|XP_002112184.1| hypothetical protein TRIADDRAFT_55971 [Trichoplax adhaerens] gi|190586083|gb|EDV26151.1| hypothetical protein TRIADDRAFT_55971 [Trichoplax adhaerens] Length = 2647 Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 23/284 (8%), Positives = 40/284 (14%), Gaps = 19/284 (6%) Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL--- 133 G+ V EL + A + S + E Sbjct: 972 GVKYVDSNELCKPSCAKRKSCSSCLSDQSCGWCYNLNRCYDRHTRASTFRFGECSDWQIG 1031 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + + D + + A G I Sbjct: 1032 AASTCRNCSQHTLCRNCITDRTCGWCATSANPYNGKCLKGDANSSFQQSCNAIMPTGTNI 1091 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + + + HK + + G + Sbjct: 1092 TWHYQSCPIINECQLNLHKCHQNATCSDTSNGYECKCNRGFIGDGFQCHETCYEECINGE 1151 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 D+ + R Sbjct: 1152 CPQKPPFKCQCKKGWTGPTCNIDCGCNKRSTCNKGV-----GICDQCEANTAGPKCEHCR 1206 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIV-----------GPICE 346 Y V +IV G CE Sbjct: 1207 IGFYGNPENGGSCVPCQCHGHSQTCNIVTGHCHCDNSTTGKHCE 1250 >gi|254513257|ref|ZP_05125322.1| metal-activated pyridoxal enzyme [Rhodobacteraceae bacterium KLH11] gi|221532261|gb|EEE35257.1| metal-activated pyridoxal enzyme [Rhodobacteraceae bacterium KLH11] Length = 351 Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 20/64 (31%), Gaps = 3/64 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI--VSE 83 TP E N F + V +K + + + G+ G+ VSE Sbjct: 8 TPAVLVDLDIAEANIDRFQGHCAKHELAVRPHIKTHKLPKLARRQLEAGAIGITCQKVSE 67 Query: 84 GELR 87 E Sbjct: 68 AEAM 71 >gi|320323989|gb|EFW80073.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. glycinea str. B076] Length = 378 Score = 42.5 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 25/73 (34%), Gaps = 1/73 (1%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-G 77 L + TP +++N + + + + +K + VI+ G+ G Sbjct: 2 SALLSSLDTPVALLDVPRMQRNIQRMQHRINELGVRLRPHVKTSKCLPVIQAQIAAGASG 61 Query: 78 LDIVSEGELRRAL 90 + + + E Sbjct: 62 VTVSTLKEAEHCF 74 >gi|71735273|ref|YP_275478.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555826|gb|AAZ35037.1| Alanine racemase, N-terminal domain family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 377 Score = 42.5 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 25/73 (34%), Gaps = 1/73 (1%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-G 77 L + TP +++N + + + + +K + VI+ G+ G Sbjct: 2 SALLSSLDTPVALLDVPRMQRNIQRMQHRINELGVRLRPHVKTSKCLPVIQAQIAAGASG 61 Query: 78 LDIVSEGELRRAL 90 + + + E Sbjct: 62 VTVSTLKEAEHCF 74 >gi|126700435|ref|YP_001089332.1| putative amino acid racemase [Clostridium difficile 630] gi|115251872|emb|CAJ69707.1| putative amino acid racemase [Clostridium difficile] Length = 370 Score = 42.5 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP + +EKN + + LK + + + + + G+ G + + Sbjct: 5 EVATPNFLLDLDQLEKNIDKIQQICTNNNKQLWPMLKTHKSTYIARLQKNAGASGFLVGT 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 E + A + + +G+ + + S I E Sbjct: 65 LDEGEALIKAGFEDIMLAYPYMGEVNINRIVTMASKINLICATDNIECAK 114 >gi|254976416|ref|ZP_05272888.1| putative amino acid racemase [Clostridium difficile QCD-66c26] gi|255093801|ref|ZP_05323279.1| putative amino acid racemase [Clostridium difficile CIP 107932] gi|255315553|ref|ZP_05357136.1| putative amino acid racemase [Clostridium difficile QCD-76w55] gi|255518216|ref|ZP_05385892.1| putative amino acid racemase [Clostridium difficile QCD-97b34] gi|255651332|ref|ZP_05398234.1| putative amino acid racemase [Clostridium difficile QCD-37x79] gi|260684394|ref|YP_003215679.1| putative amino acid racemase [Clostridium difficile CD196] gi|260688053|ref|YP_003219187.1| putative amino acid racemase [Clostridium difficile R20291] gi|306521163|ref|ZP_07407510.1| putative amino acid racemase [Clostridium difficile QCD-32g58] gi|260210557|emb|CBA65100.1| putative amino acid racemase [Clostridium difficile CD196] gi|260214070|emb|CBE06245.1| putative amino acid racemase [Clostridium difficile R20291] Length = 370 Score = 42.5 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP + +EKN + + LK + + + + + G+ G + + Sbjct: 5 EVATPNFLLDLDQLEKNIDKIQQICTNNNKQLWPMLKTHKSTYIARLQKNAGASGFLVGT 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 E + A + + +G+ + + S I E Sbjct: 65 LDEGEALIKAGFEDIMLAYPYMGEVNINRIVTMASKINLICATDNIECAK 114 >gi|330819823|ref|YP_004348685.1| hypothetical protein bgla_2g07000 [Burkholderia gladioli BSR3] gi|327371818|gb|AEA63173.1| hypothetical protein bgla_2g07000 [Burkholderia gladioli BSR3] Length = 376 Score = 42.5 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 10/75 (13%), Positives = 25/75 (33%), Gaps = 1/75 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + TP +++N D + +K + V++ G+ G+ + Sbjct: 3 IDTLPTPSALIDVPRMQRNIERMQQRLDALGVRFRPHVKTTKCEPVVRAQLAAGARGITV 62 Query: 81 VSEGELRRALAAPVP 95 + E + A + Sbjct: 63 STLKEAEQFFAQGID 77 >gi|156977941|ref|YP_001448847.1| arginine decarboxylase [Vibrio harveyi ATCC BAA-1116] gi|156529535|gb|ABU74620.1| hypothetical protein VIBHAR_06737 [Vibrio harveyi ATCC BAA-1116] Length = 640 Score = 42.5 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 110/345 (31%), Gaps = 37/345 (10%) Query: 12 HAENVSLEKL-----AHVVQTPFYCYSTTAIEKN----YLTFSNAFDG----MDTMVCYA 58 HA + + A + P + + F+ A + ++ Y Sbjct: 44 HAHQIPFSAIVNELEAKQLNLPVLVRFPQIVHQRVHGICQAFNQAIEEYQYPNKYLLVYP 103 Query: 59 LKANSNQAVIKT-------LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 +K N + V+ L + GL+ S+ EL LA ++ K + + Sbjct: 104 IKVNQQREVVDEILASQAQLENKQLGLEAGSKPELLAVLALAQQGSSVIVCNGYKDREYV 163 Query: 112 D----LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK 167 +E SEL + + A SLG + R+ + S G+K Sbjct: 164 RLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVTPRLGLRIRLASQGAGKWQASGGEK 223 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 + + + V H+GSQ+ I +LR+ Sbjct: 224 SKFGLSASQVLSVIDRLKCEDQLDTMQLVHFHLGSQMANIRDVRNGVNESARFYCELRAM 283 Query: 228 GHNIQHIDVGGGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILE 274 G NI + DVGGGL + Y ++YA I Q + II E Sbjct: 284 GANIDYFDVGGGLAVDYDGTRSQSSNSMNYGLAEYARNIVNTVGDVCQQYEQPMPVIISE 343 Query: 275 PGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 GR L A +L++ VI + + V ++ + Sbjct: 344 SGRSLAAHHAVLISNVIGTETYQPEEVFEPAVDAPFLLQNMWRNW 388 >gi|293349285|ref|XP_002727112.1| PREDICTED: MEGF11 protein-like [Rattus norvegicus] Length = 948 Score = 42.5 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 27/276 (9%), Positives = 49/276 (17%), Gaps = 5/276 (1%) Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 DI++ + R + A R + + + Sbjct: 54 CADILNWFKCTRHRISYKTAYRRGLRTMYRRRSQCCPGYYENGDFCIRCDSEHWGPHCSN 113 Query: 137 AVSLGK---KAPIAFRVNPDINANTHKKISTGKKE-DKFGIPIHQIHSLYAYASTLPGVK 192 PI + G + A G Sbjct: 114 RCQCQNGALCNPITGACVCAPGFRGWRCEEFCAPGTHGKGCQLLCQCHHGASCDPRTGEC 173 Query: 193 ISGV-DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + + H A LR Q + H G A + PP Sbjct: 174 LCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPP 233 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + + + A + + N Sbjct: 234 GTFGQNCSQDCPCHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGTFGFRCSQRCDCHNGG 293 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 A P+ + GP C + Sbjct: 294 QCSPATGACECEPGYKGPSCQERLCPEGLHGPGCTS 329 >gi|261251833|ref|ZP_05944407.1| biosynthetic arginine decarboxylase [Vibrio orientalis CIP 102891] gi|260938706|gb|EEX94694.1| biosynthetic arginine decarboxylase [Vibrio orientalis CIP 102891] Length = 636 Score = 42.5 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 116/344 (33%), Gaps = 37/344 (10%) Query: 13 AENVSLEKLA-----HVVQTPFYCYSTTAIEKN----YLTFSNAFD----GMDTMVCYAL 59 A V L + + P + + F+ A + + ++ Y + Sbjct: 41 AHQVPLSNIVSKLEQKQLNLPVLVRFPQILHQRVHGICQAFNQAIEEYQYQNNYLLVYPI 100 Query: 60 KANSNQAVIKTLAH-------LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 K N + V+ + GL+ S+ EL LA A ++ K + + Sbjct: 101 KVNQQKEVVDEILESQAQLETKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYVR 160 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKED 169 LAL V E + + K + R+ I + K S+G ++ Sbjct: 161 LALIGEKLGHKVFIVLEKLSELDLVLKEAKSLGVKPRLGIRIRLASQGAGKWQSSGGEKS 220 Query: 170 KFGIPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 KFG+ Q+ ++ + + V H+GSQ+ I +LR G Sbjct: 221 KFGLSASQVLTVIERLKQEEQLDAMQLVHFHLGSQMANIRDIRNGVNESARFYCELREMG 280 Query: 229 HNIQHIDVGGGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILEP 275 +I++ D+GGGL + Y +YA I Q + II E Sbjct: 281 ADIKYFDIGGGLAVDYDGTRSQSSNSMNYGLIEYARNIVSTVGDVCQQYEQPVPVIISES 340 Query: 276 GRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 GR L A +L+T VI + + V ++ + Sbjct: 341 GRSLTAHHAVLITNVIGTEAYHPEAVVEPSAEDPTLLQNMWRNW 384 >gi|87311553|ref|ZP_01093671.1| arginine decarboxylase [Blastopirellula marina DSM 3645] gi|87285675|gb|EAQ77591.1| arginine decarboxylase [Blastopirellula marina DSM 3645] Length = 637 Score = 42.5 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 58/330 (17%), Positives = 114/330 (34%), Gaps = 43/330 (13%) Query: 3 AFKYF-EGSLHAE-------NVSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFD 49 F G L +V LE + + + P + +E + FD Sbjct: 27 FFSVKENGKLAVHPNRDPEVSVELESIVNRLEQRGLDLPILIRFSGILETRLQEIRDVFD 86 Query: 50 --------GMDTMVCYALKANSNQAVIKTL----AHLGSGLDIVSEGELRRALAAPVPAE 97 Y +K N + V++ + G GL+ S+ EL A+ A + Sbjct: 87 VAIREYGYQNKYACVYPIKVNQQRQVVEEVLQYGRQHGFGLEAGSKPEL-LAVIALTDND 145 Query: 98 RIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI--- 154 + K + I++A+ + N+ E + + + K + ++ + Sbjct: 146 TPIICNGFKDAEYIEIAMHALKLGRNIIPVVEKYSELELILEYSAKIGVRPQIGMRVKLA 205 Query: 155 NANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG-VDMHIGSQIDQIESFHKA 213 + K ++G KFG+ + ++ + + H GSQ+ I A Sbjct: 206 SRGAGKWSASGGYRSKFGLTVTEVLKGLEELKSRGMEDCFKLLHYHQGSQVSNIRHVKSA 265 Query: 214 FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH------RPPSSSDYASLIHQYFGNL 267 + L G + ++DVGGGLG+ Y + +YA + + + Sbjct: 266 LVESARIYVDLVRRGAGLCYLDVGGGLGVDYDGSQTDFESSMNYTIEEYARDVVSHVQGI 325 Query: 268 Q-------CKIILEPGRFLVADVGILVTKV 290 ++ E GR +VA +L+ +V Sbjct: 326 CDAAGVAHPHLLSESGRAIVAFHSMLIFEV 355 >gi|326491615|dbj|BAJ94285.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326527709|dbj|BAK08129.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 711 Score = 42.5 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 86/247 (34%), Gaps = 19/247 (7%) Query: 31 CYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGS----GL 78 + T + AFD Y +K N ++ V++ + G+ GL Sbjct: 118 VRFPDVLRHRVETLNAAFDYAVRSTGYAGRYQGVYPVKCNQDRYVVEDIVEFGAPFGFGL 177 Query: 79 DIVSEGEL---RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNV----ESESELK 131 + S+ EL L A + ++ K ++ + LAL + N E E EL Sbjct: 178 EAGSKPELLLTMSCLVARGSPDALLICNGYKDLEYVSLALIARTMGLNTVIVLEQEEELD 237 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + + L + + R H ++G+K + + + Sbjct: 238 IVVEASRRLNIRPVVGMRAKLRTKHAGHFGATSGEKGKFGLNAAQILSVVAKLKALGMLD 297 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + HIGSQI + +L G ++ IDVGGGLGI Y H Sbjct: 298 CLQLLHFHIGSQIPTTALLADGVGEAAQIYCELARLGAAMRVIDVGGGLGIDYDGTHSAE 357 Query: 252 SSSDYAS 258 + A Sbjct: 358 TDMSVAY 364 >gi|268315648|ref|YP_003289367.1| alanine racemase domain-containing protein [Rhodothermus marinus DSM 4252] gi|262333182|gb|ACY46979.1| alanine racemase domain protein [Rhodothermus marinus DSM 4252] Length = 396 Score = 42.5 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 21/72 (29%), Gaps = 1/72 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + TP + N + K + + + LG+ G+ + Sbjct: 4 IEALPTPAALIDRQRLLGNLREMQQRATQEGVALRPHAKTHKTPELARLQQELGATGITV 63 Query: 81 VSEGELRRALAA 92 + E +AA Sbjct: 64 ATVDEAEAFVAA 75 >gi|168704641|ref|ZP_02736918.1| alanine racemase domain protein [Gemmata obscuriglobus UQM 2246] Length = 366 Score = 42.5 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 20/79 (25%), Gaps = 5/79 (6%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + L TP ++ N A G V K+ + + +A Sbjct: 12 GSDVADL----DTPQLLVDLDVVDGNVRRMFAAARGRGVRVRVHFKSLKCTGLARHVAAA 67 Query: 75 G-SGLDIVSEGELRRALAA 92 G G E A Sbjct: 68 GPDGFAAAKLNEAEALADA 86 >gi|117620250|ref|YP_856149.1| arginine decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166200063|sp|A0KIP8|SPEA_AERHH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|117561657|gb|ABK38605.1| arginine decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 633 Score = 42.5 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 72/216 (33%), Gaps = 17/216 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---- 74 TP ++ NAF D + Y +K N + VI+T++ Sbjct: 60 TPVLLRFPDILKSRVDALFNAFGQAIEKSGYEGDYLCVYPIKVNQQRRVIETISQSYSDK 119 Query: 75 -GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 GL+ S+ EL L+ ++ K + I AL + V E + Sbjct: 120 PRLGLEAGSKPELLAVLSHHHEQGSVIVCNGYKDREYIRHALLGNLMGHKVYIVVEKPSE 179 Query: 134 NQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL-P 189 + + + I + + + S+G KFG+ QI +L L Sbjct: 180 LEMVLDESARLNIKPNIGVRAKLASTGSGMWESSGGSMSKFGLSASQILALIERLRGLGK 239 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + + H+GSQI I + +LR Sbjct: 240 LDCLQLLHFHLGSQIANIRDIQGGIRECGRFYAELR 275 >gi|15645050|ref|NP_207220.1| arginine decarboxylase [Helicobacter pylori 26695] gi|2313524|gb|AAD07486.1| arginine decarboxylase (speA) [Helicobacter pylori 26695] Length = 615 Score = 42.5 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 90/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLNYGLEAGSKSEL-IIAMSYTNPKAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|188527815|ref|YP_001910502.1| arginine decarboxylase [Helicobacter pylori Shi470] gi|188144055|gb|ACD48472.1| arginine decarboxylase [Helicobacter pylori Shi470] Length = 615 Score = 42.5 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 89/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA-VIKTL---AHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + V+ + L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLNYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDVDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|299135496|ref|ZP_07028685.1| alanine racemase domain protein [Afipia sp. 1NLS2] gi|298589751|gb|EFI49957.1| alanine racemase domain protein [Afipia sp. 1NLS2] Length = 366 Score = 42.1 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 18/56 (32%), Gaps = 1/56 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTF-SNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 V+TP A+E N + V KA+ + + + G+ Sbjct: 13 IAQVETPALIVDLDAMEANIKALAARVAAYPSVRVTPHAKAHKSVEIARRQMAAGA 68 >gi|307320836|ref|ZP_07600246.1| alanine racemase domain protein [Sinorhizobium meliloti AK83] gi|306893546|gb|EFN24322.1| alanine racemase domain protein [Sinorhizobium meliloti AK83] Length = 352 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 3/72 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI--VSE 83 TP +N + F D V +K + + + G+ G+ V+E Sbjct: 7 TPAVLVDLDIARRNVVAFQAYADRHGIRVRPHIKTHKLPQMAELQLDTGAIGITCQKVTE 66 Query: 84 GELRRALAAPVP 95 E +A + Sbjct: 67 AEAMVDGSARIK 78 >gi|241766468|ref|ZP_04764338.1| alanine racemase domain-containing protein [Acidovorax delafieldii 2AN] gi|241363320|gb|EER58850.1| alanine racemase domain-containing protein [Acidovorax delafieldii 2AN] Length = 85 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 1/62 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP A+E+N ++ K + + + L G+ G + E Sbjct: 21 TPSLVVDLDAMERNIQRMADFARKHRVRWRPHAKMHKSAEIALLLQQAGATGACVQKVAE 80 Query: 86 LR 87 Sbjct: 81 AE 82 >gi|311107165|ref|YP_003980018.1| alanine racemase [Achromobacter xylosoxidans A8] gi|310761854|gb|ADP17303.1| alanine racemase, N-terminal domain protein 1 [Achromobacter xylosoxidans A8] Length = 385 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 1/71 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIV 81 + TP T + +N + G + LK + V + L G + Sbjct: 11 DTLDTPCLLLDETRMARNIERLNALMAGHGVQLRPHLKTPKSIDVARRLMSSPQGPAAVS 70 Query: 82 SEGELRRALAA 92 + E + AA Sbjct: 71 TLQEAEQFAAA 81 >gi|90410123|ref|ZP_01218140.1| biosynthetic arginine decarboxylase [Photobacterium profundum 3TCK] gi|90329476|gb|EAS45733.1| biosynthetic arginine decarboxylase [Photobacterium profundum 3TCK] Length = 640 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 108/341 (31%), Gaps = 37/341 (10%) Query: 16 VSLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKAN 62 + L KLA + P ++ + +AF+ + Y +K N Sbjct: 44 IDLSKLADELIAAGASLPVLVRFPDILQNRVDSLCSAFNQSIESYDYQNSYLAVYPIKVN 103 Query: 63 SNQAVIKTL-------AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID--- 112 QAV+ + GL+ S+ EL LA A ++ K + I Sbjct: 104 QQQAVVSEILKSQYAKQQRQLGLEAGSKPELMAVLAMAQEASSVIVCNGYKDREYIRLAL 163 Query: 113 -LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF 171 +E SEL + + A LG + R + S G+K Sbjct: 164 IGEKLGHEVYIVLEKMSELNIILEEAKQLGVTPRLGLRARLASQGKGKWQSSGGEKSKFG 223 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 + + + + H+GSQ+ I + +L+ G I Sbjct: 224 LCASQVLTVIDLLRERDMLGCLQLLHFHLGSQLANIRDVRNGVGEAGRIYAELKKMGVGI 283 Query: 232 QHIDVGGGLGIAYHSDH------RPPSSSDYASL-------IHQYFGNLQCKIILEPGRF 278 +DVGGGL I Y + S+YA+ + + +II E GR Sbjct: 284 TTVDVGGGLAIDYEGTRSQSSCSMNYNLSEYANNVVYTLGDVCIEYDIAMPRIISESGRN 343 Query: 279 LVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 L A +L+T VI ++ + + Sbjct: 344 LTAHHAVLITDVIGVEGYKAEDISAPADDAPQILHNMWRSW 384 >gi|332673834|gb|AEE70651.1| arginine 2-monooxygenase [Helicobacter pylori 83] Length = 615 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 90/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPKAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 >gi|330986553|gb|EGH84656.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 378 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 25/73 (34%), Gaps = 1/73 (1%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-G 77 L + TP +++N + + + + +K + VI+ G+ G Sbjct: 2 SALLSSLDTPVALLDVPRMQRNIQRMQHRMNELGVRLRPHVKTSKCLPVIQAQIAAGASG 61 Query: 78 LDIVSEGELRRAL 90 + + + E Sbjct: 62 VAVSTLKEAEHCF 74 >gi|147782234|emb|CAN65288.1| hypothetical protein VITISV_008959 [Vitis vinifera] Length = 613 Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 94/283 (33%), Gaps = 21/283 (7%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGS--- 76 P ++ + +AFD + +K N ++ +++ + GS Sbjct: 21 PLIVRLPDVLQNRLESLQSAFDFAIQSQGYESHYQGVFPVKCNQDRFIVEDVVKFGSAFR 80 Query: 77 -GLDIVSEGE--LRRALAAPVPAERIVFSGVGKTIDEIDLALQSG----IYCFNVESESE 129 GL+ S+ E L + E ++ K D I LAL + +E E E Sbjct: 81 FGLEAGSKPELLLAMSCLCKGNPEALLVCNGFKDADYIALALVARKLALNTVIVLEQEEE 140 Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 L + + L I R H ++G+K + + Sbjct: 141 LDLVINLSQKLSVHPVIGVRAKLRTKHAGHFGSTSGEKGKFGLTTXQILRVVRKLEQAGM 200 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + + HIGSQI + + +L G +++ ID+GGGLGI Y Sbjct: 201 LDSLQLLHFHIGSQIPSTDLLADGVSEAAQIYCELVRLGAHMRVIDIGGGLGIDYDGSKS 260 Query: 250 PPSSSDYAS---LIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 S I E GR LV+ IL+ + Sbjct: 261 SESDISVGYGLEEYAMAVSVKHPVICSESGRALVSHHSILIFE 303 >gi|221325970|gb|ACM16864.1| arginine decarboxylase [Solanum chilense] Length = 222 Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGSGL- 78 P ++ + +AFD Y +K N ++ V++ + GSG Sbjct: 45 PIVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104 Query: 79 ---DIVSEGELRRALAAPVPAE 97 + S+ EL A+++ Sbjct: 105 FGLEAGSKPELLLAMSSLCKGS 126 >gi|330828933|ref|YP_004391885.1| Biosynthetic arginine decarboxylase [Aeromonas veronii B565] gi|328804069|gb|AEB49268.1| Biosynthetic arginine decarboxylase [Aeromonas veronii B565] Length = 624 Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 72/216 (33%), Gaps = 17/216 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---- 74 TP ++ NAF D + Y +K N + VI+T++ Sbjct: 51 TPVLLRFPDILKSRVDALFNAFGQAIEKSGYEGDYLCVYPIKVNQQRRVIETISQSYSDK 110 Query: 75 -GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 GL+ S+ EL L+ ++ K + I AL + V E + Sbjct: 111 PRLGLEAGSKPELLAVLSHHHEQGSVIVCNGYKDREYIRHALLGNLMGHKVYIVVEKPSE 170 Query: 134 NQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL-P 189 + + + I + + + S+G KFG+ QI +L L Sbjct: 171 LEMVLDESARLNIKPNIGVRAKLASTGSGMWESSGGSMSKFGLSASQILALIERLRGLGK 230 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + + H+GSQI I + +LR Sbjct: 231 LDCLQLLHFHLGSQIANIRDIQGGIRECGRFYAELR 266 >gi|242046596|ref|XP_002400274.1| ornithine decarboxylase, putative [Ixodes scapularis] gi|215497604|gb|EEC07098.1| ornithine decarboxylase, putative [Ixodes scapularis] Length = 159 Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 1/87 (1%) Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLH-IHADIVGPICETGDFIALNRKIALPR 361 ++ + N+ + LY Y + P DR + + G C D + + Sbjct: 19 FINESNNNCVCANLYQFLDIQLYPLKPPFDRPRNVLTSLWGATCNPIDRMEERTLMFDVS 78 Query: 362 PGDLLYIEKTGAYGAVQSGTYNSRLLI 388 + L+++ GAY + +N Sbjct: 79 VDEWLFMDNMGAYSLIGVTGFNGFGFP 105 >gi|238759234|ref|ZP_04620401.1| hypothetical protein yaldo0001_7810 [Yersinia aldovae ATCC 35236] gi|238702521|gb|EEP95071.1| hypothetical protein yaldo0001_7810 [Yersinia aldovae ATCC 35236] Length = 387 Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 20/74 (27%), Gaps = 2/74 (2%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLGS-GLDIVSEGELR 87 Y ++ N + K N + K L G G+ V E R Sbjct: 31 YVIDVDQVKDNARLLLETAARYGITLYLMSKQFGRNPQLCKILLECGYKGIVAVDYKEAR 90 Query: 88 RALAAPVPAERIVF 101 + +P I Sbjct: 91 QLYRHHLPVAHIGH 104 >gi|33340101|gb|AAQ14538.1|AF306451_1 arginine decarboxylase [Pinus sylvestris] Length = 551 Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLG---- 75 P ++ + +AFD Y +K N ++ V++ + G Sbjct: 56 PLIIRFPDVLKHRLESLQSAFDSAMRMQSYESYFQGVYPVKCNQDRYVVENIVEFGKPYA 115 Query: 76 SGLDIVSEGELRRALAAPVPAE 97 GL+ S+ EL A+A+ A Sbjct: 116 FGLEAGSKPELLLAMASMCKAS 137 >gi|295699224|ref|YP_003607117.1| alanine racemase domain protein [Burkholderia sp. CCGE1002] gi|295438437|gb|ADG17606.1| alanine racemase domain protein [Burkholderia sp. CCGE1002] Length = 382 Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 1/74 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 ++TP ++KN + + +K V++ G+ G+ + Sbjct: 4 EQIETPAALIDVARMQKNIARMQGRMNELGVAFRPHVKTTKCIDVVRAQIAAGARGITVS 63 Query: 82 SEGELRRALAAPVP 95 + E AA V Sbjct: 64 TLKEAEAFFAAGVD 77 >gi|323496406|ref|ZP_08101464.1| arginine decarboxylase [Vibrio sinaloensis DSM 21326] gi|323318683|gb|EGA71636.1| arginine decarboxylase [Vibrio sinaloensis DSM 21326] Length = 636 Score = 42.1 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 68/344 (19%), Positives = 120/344 (34%), Gaps = 37/344 (10%) Query: 13 AENVSLEKLA-----HVVQTPFYCYSTTAIEKN----YLTFSNAFDG----MDTMVCYAL 59 A V L + + P + + F+ A + + ++ Y + Sbjct: 41 AHQVPLSNIVSKLEQKQLNLPVLVRFPQILHQRVHGICQAFNQAIEEYQYSNNYLLVYPI 100 Query: 60 KANSNQAVIKTLAH-------LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 K N + V+ + GL+ S+ EL LA A ++ K + + Sbjct: 101 KVNQQKEVVDEILESQAQLETKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYVR 160 Query: 113 LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKED 169 LAL V E + + K + R+ I + K S+G ++ Sbjct: 161 LALIGEKLGHKVFIVLEKLSELDLVLKEAKSLGVKPRLGIRIRLASQGAGKWQSSGGEKS 220 Query: 170 KFGIPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 KFG+ Q+ ++ + + V H+GSQ+ I +LR+ G Sbjct: 221 KFGLAASQVLTVIERLKQEEQLDAMQLVHFHLGSQMANIRDIRNGVNESARFYCELRAMG 280 Query: 229 HNIQHIDVGGGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILEP 275 I++ D+GGGL + Y +YA I Q +G Q II E Sbjct: 281 AGIKYFDIGGGLAVDYDGTRSQSSNSMNYGLIEYARNIVSTVGDVCQQYGQPQPVIISES 340 Query: 276 GRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 GR L A +L+T VI + ++ + D ++ + Sbjct: 341 GRSLTAHHAVLITNVIGTEAYHPESVIAPDADDPTLLQNMWRNW 384 >gi|269961366|ref|ZP_06175731.1| biosynthetic arginine decarboxylase [Vibrio harveyi 1DA3] gi|269833917|gb|EEZ88011.1| biosynthetic arginine decarboxylase [Vibrio harveyi 1DA3] Length = 640 Score = 42.1 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 62/335 (18%), Positives = 108/335 (32%), Gaps = 33/335 (9%) Query: 18 LEKL-AHVVQTPFYCYSTTAIEKN----YLTFSNAFDG----MDTMVCYALKANSNQAVI 68 + +L A + P + + F+ A + ++ Y +K N + V+ Sbjct: 54 VNELEAKQLNLPVLVRFPQIVHQRVHGICQAFNQAIEEYQYPNKYLLVYPIKVNQQREVV 113 Query: 69 KT-------LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID----LALQS 117 L + GL+ S+ EL LA ++ K + + Sbjct: 114 DEILASQAQLENKQLGLEAGSKPELLAVLALAQQGSSVIVCNGYKDREYVRLALIGEKLG 173 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 +E SEL + + A SLG + R+ + S G+K Sbjct: 174 HKVFIVLEKLSELDLVLEEAKSLGVTPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQV 233 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + + V H+GSQ+ I +LR+ G NI + DVG Sbjct: 234 LSVIERLKREDKLDTMQLVHFHLGSQMANIRDVRNGVNESARFYCELRAMGANIDYFDVG 293 Query: 238 GGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVG 284 GGL + Y ++YA I Q + II E GR L A Sbjct: 294 GGLAVDYDGTRSQSSNSMNYGLAEYARNIVNTVGDVCQQYEQPMPVIISESGRSLTAHHA 353 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 +L++ VI + + ++ + Sbjct: 354 VLISNVIGTETYQPEEVFEPAADAPFLLQNMWRNW 388 >gi|238504745|ref|XP_002383603.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] gi|317155184|ref|XP_001824975.2| metal-activated pyridoxal enzyme [Aspergillus oryzae RIB40] gi|220689717|gb|EED46067.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] Length = 367 Score = 42.1 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 1/70 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +E N ++ + LK + + + LA G+ G + E Sbjct: 15 TPSMIVDLDLMEANIKKLFDSLLPTGLNIRPHLKTTKSAILAQKLAAAGAKGCCVAKVSE 74 Query: 86 LRRALAAPVP 95 AA Sbjct: 75 AEAITAAGFD 84 >gi|159474868|ref|XP_001695545.1| hypothetical protein CHLREDRAFT_175110 [Chlamydomonas reinhardtii] gi|158275556|gb|EDP01332.1| predicted protein [Chlamydomonas reinhardtii] Length = 390 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 18/68 (26%), Gaps = 3/68 (4%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSNQAVIKTLAHLGS--GLDIV 81 V TP A ++N G V KA+ V + L G+ Sbjct: 44 VDTPALILDLDAFDRNCEKLKGVMAGFPGVAVRPHAKAHKCAEVARRQLQLLGAKGVCCQ 103 Query: 82 SEGELRRA 89 E Sbjct: 104 KVIEAEAM 111 >gi|320162128|ref|YP_004175353.1| hypothetical protein ANT_27270 [Anaerolinea thermophila UNI-1] gi|319995982|dbj|BAJ64753.1| hypothetical protein ANT_27270 [Anaerolinea thermophila UNI-1] Length = 370 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 6/63 (9%), Positives = 16/63 (25%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 P + +N + K + + + + G VS ++ Sbjct: 10 PTLLLDEQIVRRNIRAMAQKVAASGVHFRPHFKTHQSCQIGEWFREEGVSAITVSSVDMA 69 Query: 88 RAL 90 + Sbjct: 70 KYF 72 >gi|125624499|ref|YP_001032982.1| alanine racemase [Lactococcus lactis subsp. cremoris MG1363] gi|20137246|sp|Q9RLU5|ALR_LACLM RecName: Full=Alanine racemase gi|16974088|emb|CAB56755.2| alanine racemase [Lactococcus lactis subsp. cremoris MG1363] gi|124493307|emb|CAL98277.1| Alr protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071289|gb|ADJ60689.1| alanine racemase [Lactococcus lactis subsp. cremoris NZ9000] Length = 367 Score = 42.1 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 5/59 (8%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKA----NSNQAVIKTLAHLGSGLDIVSEGE 85 AI N F + + A+KA + + V K ++ L G + + E Sbjct: 12 IVDLKAIRNNIEKFKKHI-NPNAEIWPAVKADAYGHGSIEVSKAVSDLVGGFCVSNLDE 69 >gi|159044653|ref|YP_001533447.1| hypothetical protein Dshi_2109 [Dinoroseobacter shibae DFL 12] gi|157912413|gb|ABV93846.1| hypothetical protein Dshi_2109 [Dinoroseobacter shibae DFL 12] Length = 383 Score = 42.1 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 18/57 (31%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 TP + +N + + + LK + + + G+G VS Sbjct: 13 PTPCLLVDEARMTRNIERLAQHAAALGLSLRPHLKTTKSIEAARRVLPGGNGPATVS 69 >gi|330972501|gb|EGH72567.1| alanine racemase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 378 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + ++ N + + + +K + VI+ G+ G+ + + E Sbjct: 10 TPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTLKE 69 Query: 86 LRRAL 90 Sbjct: 70 AEHCF 74 >gi|330953813|gb|EGH54073.1| alanine racemase [Pseudomonas syringae Cit 7] Length = 378 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + ++ N + + + +K + VI+ G+ G+ + + E Sbjct: 10 TPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTLKE 69 Query: 86 LRRAL 90 Sbjct: 70 AEHCF 74 >gi|330899492|gb|EGH30911.1| alanine racemase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330940623|gb|EGH43657.1| alanine racemase [Pseudomonas syringae pv. pisi str. 1704B] gi|330976056|gb|EGH76122.1| alanine racemase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 378 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + ++ N + + + +K + VI+ G+ G+ + + E Sbjct: 10 TPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTLKE 69 Query: 86 LRRAL 90 Sbjct: 70 AEHCF 74 >gi|302188653|ref|ZP_07265326.1| alanine racemase, N-terminal [Pseudomonas syringae pv. syringae 642] Length = 378 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + ++ N + + + +K + VI+ G+ G+ + + E Sbjct: 10 TPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTLKE 69 Query: 86 LRRAL 90 Sbjct: 70 AEHCF 74 >gi|289678897|ref|ZP_06499787.1| alanine racemase, N-terminal [Pseudomonas syringae pv. syringae FF5] Length = 337 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + ++ N + + + +K + VI+ G+ G+ + + E Sbjct: 13 TPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTLKE 72 Query: 86 LRRAL 90 Sbjct: 73 AEHCF 77 >gi|66046627|ref|YP_236468.1| alanine racemase, N-terminal [Pseudomonas syringae pv. syringae B728a] gi|63257334|gb|AAY38430.1| Alanine racemase, N-terminal [Pseudomonas syringae pv. syringae B728a] Length = 378 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + ++ N + + + +K + VI+ G+ G+ + + E Sbjct: 10 TPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTLKE 69 Query: 86 LRRAL 90 Sbjct: 70 AEHCF 74 >gi|170692411|ref|ZP_02883574.1| alanine racemase domain protein [Burkholderia graminis C4D1M] gi|170142841|gb|EDT11006.1| alanine racemase domain protein [Burkholderia graminis C4D1M] Length = 380 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +EKN + + +K + V + G+ G+ + + E Sbjct: 8 TPAAIVDVRKMEKNIAAMQERMNALGVKFRPHVKTSKCVEVAQAQIAAGARGITVSTLKE 67 Query: 86 LRRALAA 92 AA Sbjct: 68 AESFFAA 74 >gi|119386626|ref|YP_917681.1| alanine racemase domain-containing protein [Paracoccus denitrificans PD1222] gi|119377221|gb|ABL71985.1| D-3-hydroxyaspartate aldolase [Paracoccus denitrificans PD1222] Length = 387 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 4/66 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI- 80 +QTP A+E+N + K + + V K LG G+ Sbjct: 26 EIQTPCLILDLDALERNIRKMGDYAKAHGMRHRSHGKMHKSVDVQKLQESLGGSVGVCCQ 85 Query: 81 -VSEGE 85 VSE E Sbjct: 86 KVSEAE 91 >gi|170736332|ref|YP_001777592.1| alanine racemase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169818520|gb|ACA93102.1| alanine racemase domain protein [Burkholderia cenocepacia MC0-3] Length = 376 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 21/65 (32%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +++N D + +K Q V+ G+ G+ + + E Sbjct: 8 TPAALIDVAHMQRNIARMQTHLDALGVRFRPHVKTTKCQQVVDAQIAAGAQGITVSTLKE 67 Query: 86 LRRAL 90 + Sbjct: 68 AEQFF 72 >gi|91789931|ref|YP_550883.1| putative threonine aldolase [Polaromonas sp. JS666] gi|91699156|gb|ABE45985.1| putative threonine aldolase [Polaromonas sp. JS666] Length = 400 Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 5/78 (6%) Query: 17 SLEKL----AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLA 72 L L V TP A+++N + K + + ++ K Sbjct: 14 RLSDLIGKPVTEVDTPALVIDLDAMKRNLGRMAEFAKKHSIRWRPHAKMHKSASLAKLQI 73 Query: 73 HLGS-GLDIVSEGELRRA 89 G+ G+ + E Sbjct: 74 KAGAVGVCVQKTAEAEAM 91 >gi|330508848|ref|YP_004385276.1| arginine decarboxylase [Methanosaeta concilii GP-6] gi|328929656|gb|AEB69458.1| arginine decarboxylase [Methanosaeta concilii GP-6] Length = 652 Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 23/262 (8%) Query: 8 EGSLHAENVSLEKLAHVVQT------PFYCYSTTAIEKNYLTFSNAFDGM--------DT 53 +L+ ++V + L ++ P +E + AF G Sbjct: 34 NKNLY-QSVDIMDLIEEIEKSRDLEFPVLLRFPQMLEDRIDEITGAFMGAIEEFNYSGTY 92 Query: 54 MVCYALKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTID 109 + +K N + VI+ + G+ G+++ ++ EL AL+ +P + K D Sbjct: 93 QPIFPMKVNQRKEVIEYIIKYGAKHKIGMEVGTKAELLAALSLGLPRYAPLICNGYKDED 152 Query: 110 EID---LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK 166 + V+ E+ + + A ++G + RV + S G+ Sbjct: 153 YLRLALSIHNLNNIIIVVDLFEEIYDILKYADAMGVVPRVGMRVKLFARGSGRWVESGGE 212 Query: 167 KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 + + + + HIGSQI I + A + + R Sbjct: 213 SAKFGLSTSEALELMRILEERGLTSSLKMLHFHIGSQITDIRTVKNAMNEAARVYAKAR- 271 Query: 227 NGHNIQHIDVGGGLGIAYHSDH 248 +I++++VGGGL + Y+ + Sbjct: 272 KMADIEYLNVGGGLSVDYNGSN 293 >gi|110680093|ref|YP_683100.1| threonine aldolase [Roseobacter denitrificans OCh 114] gi|109456209|gb|ABG32414.1| threonine aldolase [Roseobacter denitrificans OCh 114] Length = 387 Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V LG G+ Sbjct: 25 ADIQTPCLVLDLDALERNIKKMGDFAKAHGMRHRVHGKMHKSVDVALLQEELGGSVGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|227536022|ref|ZP_03966071.1| alanine racemase domain protein [Sphingobacterium spiritivorum ATCC 33300] gi|227244135|gb|EEI94150.1| alanine racemase domain protein [Sphingobacterium spiritivorum ATCC 33300] Length = 372 Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 6/78 (7%) Query: 16 VSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG 75 ++ + LA TPF + I +N A +G + + +K + +++ G Sbjct: 8 INPKTLAD---TPFLALYSDRISQNIKQLIAAVNGDVSKLRPHVKTHKLGEILELFKVYG 64 Query: 76 SG---LDIVSEGELRRAL 90 VSE EL Sbjct: 65 INKVKCATVSEAELCAMH 82 >gi|163731488|ref|ZP_02138935.1| threonine aldolase [Roseobacter litoralis Och 149] gi|161394942|gb|EDQ19264.1| threonine aldolase [Roseobacter litoralis Och 149] Length = 387 Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V LG G+ Sbjct: 25 ADIQTPCLVLDLDALERNIKKMGDFAKSHGMRHRVHGKMHKSVDVALLQEELGGSVGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|238764828|ref|ZP_04625769.1| hypothetical protein ykris0001_31020 [Yersinia kristensenii ATCC 33638] gi|238696935|gb|EEP89711.1| hypothetical protein ykris0001_31020 [Yersinia kristensenii ATCC 33638] Length = 392 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 38/128 (29%), Gaps = 3/128 (2%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLG-SGLDIVSEGELR 87 Y +++N + K N + K L G G+ V E R Sbjct: 31 YVIDVDQVKQNARLLLETATRHGITLYLMSKQFGRNPLLCKILLECGYHGIVAVDFKEAR 90 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + +P + V +D + V S ++ + + AV + + Sbjct: 91 QLYQHNLPVAH-IGHLVQIPSGMVDEVVSHHPEVITVYSVAKAREIAAAAVRQNTEQALL 149 Query: 148 FRVNPDIN 155 +V + Sbjct: 150 LKVWHHAD 157 >gi|55981609|ref|YP_144906.1| arginine decarboxylase [Thermus thermophilus HB8] gi|55773022|dbj|BAD71463.1| arginine decarboxylase [Thermus thermophilus HB8] Length = 628 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 90/257 (35%), Gaps = 21/257 (8%) Query: 17 SLEKLAHVV-----QTPFYCYSTTAIEKNYLTFSNAFDGMDTMV--------CYALKANS 63 SL ++ + P +E + AF Y +K N Sbjct: 45 SLLEIVEALRDEGRPLPLVLRFPQILEARVRDLNEAFLEAMAKYGYQGTYRGVYPVKVNQ 104 Query: 64 NQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ--- 116 + V++T+A G GL+ S+ EL LA + E ++ + K D + LAL Sbjct: 105 RRLVLETVARAGRPYHLGLEAGSKPELALILAQDLSEEALITTNGFKDDDFVRLALMGRK 164 Query: 117 -SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 +E +EL + + + LG K + R + S G+ Sbjct: 165 LGRNVVITLEKFAELFRVLRLSKELGVKPLLGIRYKLKAKGAGQWEASGGENAKFGLTTP 224 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 + ++ + + HIGSQ+ I A + QLR G +++++ Sbjct: 225 EIVRAVEVLQEEGLLDALVMLHAHIGSQVTDIRRIKAAVREAAQTYVQLRKLGAPLRYLN 284 Query: 236 VGGGLGIAYHSDHRPPS 252 +GGGL + Y Sbjct: 285 LGGGLAVDYDGSKTNFY 301 >gi|23495371|dbj|BAC20179.1| D-b-hydroxy-aspartate aldolase [Paracoccus denitrificans] Length = 387 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 4/66 (6%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI- 80 +QTP A+E+N + K + + V K LG G+ Sbjct: 26 EIQTPCLILDLDALERNIRKMGDYAKAHGMRHRSHGKMHKSVDVQKLQESLGGSVGVCCQ 85 Query: 81 -VSEGE 85 VSE E Sbjct: 86 KVSEAE 91 >gi|126740880|ref|ZP_01756564.1| threonine aldolase, low-specificity [Roseobacter sp. SK209-2-6] gi|126717980|gb|EBA14698.1| threonine aldolase, low-specificity [Roseobacter sp. SK209-2-6] Length = 387 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V K LG G+ Sbjct: 25 ADIQTPALVLDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVAKLQETLGGAVGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|54295359|ref|YP_127774.1| hypothetical protein lpl2444 [Legionella pneumophila str. Lens] gi|53755191|emb|CAH16684.1| hypothetical protein lpl2444 [Legionella pneumophila str. Lens] Length = 376 Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 7/62 (11%), Positives = 15/62 (24%), Gaps = 1/62 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP ++ N + K + + + G+ G+ E Sbjct: 15 TPCLVIDYEKLKYNLKMMQQHGFKWGIGIRPHCKTHKCTQIARLQLEYGAIGISAAKLSE 74 Query: 86 LR 87 Sbjct: 75 AE 76 >gi|302390371|ref|YP_003826192.1| alanine racemase domain protein [Thermosediminibacter oceani DSM 16646] gi|302200999|gb|ADL08569.1| alanine racemase domain protein [Thermosediminibacter oceani DSM 16646] Length = 372 Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 9/64 (14%), Positives = 22/64 (34%), Gaps = 1/64 (1%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEG 84 TP + +E+N ++ + +K + + + G+ G + + Sbjct: 7 PTPVFLVDLDVLEQNIKETADIVKTYGKRLWPMVKTHKSTEIAAMQKAAGAEGFLVGTLL 66 Query: 85 ELRR 88 E R Sbjct: 67 EAER 70 >gi|307611384|emb|CBX01048.1| hypothetical protein LPW_27491 [Legionella pneumophila 130b] Length = 376 Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 7/62 (11%), Positives = 15/62 (24%), Gaps = 1/62 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP ++ N + K + + + G+ G+ E Sbjct: 15 TPCLVIDYEKLKYNLKMMQQHGFKWGIGIRPHCKTHKCTQIARLQLEYGAIGISAAKLSE 74 Query: 86 LR 87 Sbjct: 75 AE 76 >gi|119715651|ref|YP_922616.1| alanine racemase domain-containing protein [Nocardioides sp. JS614] gi|119536312|gb|ABL80929.1| alanine racemase domain protein [Nocardioides sp. JS614] Length = 386 Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 1/64 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +E+N + ++ + K++ + + G+ GL + + GE Sbjct: 33 TPSILVDLDQVERNIASMASLAKRRGMTLRPHAKSHKSTFIADLQLDAGATGLCLATAGE 92 Query: 86 LRRA 89 Sbjct: 93 AEVM 96 >gi|163747972|ref|ZP_02155301.1| hypothetical protein OIHEL45_19411 [Oceanibulbus indolifex HEL-45] gi|161378769|gb|EDQ03209.1| hypothetical protein OIHEL45_19411 [Oceanibulbus indolifex HEL-45] Length = 173 Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 1/69 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGE 85 TP +E+N ++ D + + LK + V + LA G + + + E Sbjct: 11 TPALLLDEARMERNISRLASHADALGVALRPHLKTAKSIDVARRLAGGTPGPITVSTLAE 70 Query: 86 LRRALAAPV 94 AA Sbjct: 71 AEVFFAAGH 79 >gi|317050118|ref|YP_004117766.1| alanine racemase domain-containing protein [Pantoea sp. At-9b] gi|316951735|gb|ADU71210.1| alanine racemase domain protein [Pantoea sp. At-9b] Length = 381 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 2/66 (3%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLD 79 +A + TPF +++N D + +K + + + + LG+ G+ Sbjct: 15 IADRL-TPFLEIDAARLQRNLQQMQQKADAAGVALRPHIKTHKSVWIAQQQRALGARGVT 73 Query: 80 IVSEGE 85 + E Sbjct: 74 VSKPSE 79 >gi|188993450|ref|YP_001905460.1| arginine decarboxylase [Xanthomonas campestris pv. campestris str. B100] gi|167735210|emb|CAP53422.1| Arginine decarboxylase [Xanthomonas campestris pv. campestris] Length = 675 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 103/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAH---LGS 76 P + + AF Y +K N ++ V TLA G Sbjct: 106 PLLVRFPDILGQRLGKLQAAFAQAQADWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 165 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 166 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNL 224 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 225 VLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKSLRDTEYADS 284 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 285 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 344 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 345 CSINYGLHSYASNIVQPLASACEEHGLPPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 404 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 405 RVPDAHDDEPAAIRHLREIH 424 >gi|21115130|gb|AAM43099.1| biosynthetic arginine decarboxylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575582|gb|AAY50992.1| biosynthetic arginine decarboxylase [Xanthomonas campestris pv. campestris str. 8004] Length = 675 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 103/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAH---LGS 76 P + + AF Y +K N ++ V TLA G Sbjct: 106 PLLVRFPDILGQRLGKLQAAFAQAQADWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 165 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 166 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNL 224 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 225 VLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKSLRDTEYADS 284 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 285 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 344 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 345 CSINYGLHSYASNIVQPLASACEEHGLPPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 404 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 405 RVPDAHDDEPAAIRHLREIH 424 >gi|159185965|ref|NP_356693.2| hypothetical protein Atu3948 [Agrobacterium tumefaciens str. C58] gi|159141099|gb|AAK89478.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 381 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 1/70 (1%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVS 82 + TP + +N D ++ + LK + K + G+G + + Sbjct: 9 KISTPSLIVDEARMLRNISRLQRHLDSLNVSIRPHLKTVKSVDAAKRILSSGNGPATVST 68 Query: 83 EGELRRALAA 92 E +A Sbjct: 69 LKEAEVFASA 78 >gi|54298526|ref|YP_124895.1| hypothetical protein lpp2590 [Legionella pneumophila str. Paris] gi|53752311|emb|CAH13743.1| hypothetical protein lpp2590 [Legionella pneumophila str. Paris] Length = 376 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 7/62 (11%), Positives = 15/62 (24%), Gaps = 1/62 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP ++ N + K + + + G+ G+ E Sbjct: 15 TPCLVIDYEKLKYNLKMMQEHGFKWGIGIRPHCKTHKCTQIARLQLEYGAIGISAAKLSE 74 Query: 86 LR 87 Sbjct: 75 AE 76 >gi|77747964|ref|NP_639208.2| arginine decarboxylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761320|ref|YP_245012.2| arginine decarboxylase [Xanthomonas campestris pv. campestris str. 8004] gi|48474871|sp|Q8P448|SPEA_XANCP RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC Length = 628 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 103/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAH---LGS 76 P + + AF Y +K N ++ V TLA G Sbjct: 59 PLLVRFPDILGQRLGKLQAAFAQAQADWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + Sbjct: 119 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNL 177 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + + + + K ++G + KFG+ Q+ L+ Sbjct: 178 VLEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKSLRDTEYADS 237 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLGI Y Sbjct: 238 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSY 297 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 298 CSINYGLHSYASNIVQPLASACEEHGLPPPRIVTECGRAMTAHHAVLIANVSEVEQAPEG 357 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 358 RVPDAHDDEPAAIRHLREIH 377 >gi|323528944|ref|YP_004231096.1| alanine racemase domain-containing protein [Burkholderia sp. CCGE1001] gi|323385946|gb|ADX58036.1| alanine racemase domain protein [Burkholderia sp. CCGE1001] Length = 376 Score = 41.7 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 8/65 (12%), Positives = 22/65 (33%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +++N + + +K + V++ G+ G+ + + E Sbjct: 8 TPAALIDVERMQRNIARMQQRMNALGVKFRPHVKTTKCEQVVRAQMDAGASGITVSTLKE 67 Query: 86 LRRAL 90 + Sbjct: 68 AEQFF 72 >gi|317178664|dbj|BAJ56452.1| arginine decarboxylase [Helicobacter pylori F30] Length = 615 Score = 41.7 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 89/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLNYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|308063817|gb|ADO05704.1| arginine decarboxylase [Helicobacter pylori Sat464] Length = 615 Score = 41.7 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 89/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLNYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDVDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|308062311|gb|ADO04199.1| arginine decarboxylase [Helicobacter pylori Cuz20] Length = 615 Score = 41.7 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 89/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLNYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDVDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|261839769|gb|ACX99534.1| arginine decarboxylase [Helicobacter pylori 52] Length = 615 Score = 41.7 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 89/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLNYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|254440988|ref|ZP_05054481.1| Alanine racemase, N-terminal domain family [Octadecabacter antarcticus 307] gi|198251066|gb|EDY75381.1| Alanine racemase, N-terminal domain family [Octadecabacter antarcticus 307] Length = 394 Score = 41.7 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 37/137 (27%), Gaps = 4/137 (2%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V LG G+ Sbjct: 31 ADIQTPCLVLDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVAMLQEKLGGAVGVCC 90 Query: 81 --VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 VSE E+ + K + V+ + L+ AV Sbjct: 91 QKVSEAEVFARGGIKDVMVSNQVTAPAKIDRLARMPKLGARVLCCVDDPENVANLSAAAV 150 Query: 139 SLGKKAPIAFRVNPDIN 155 G + ++ Sbjct: 151 KHGTQIECIVEIDCGAG 167 >gi|255949208|ref|XP_002565371.1| Pc22g14470 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592388|emb|CAP98735.1| Pc22g14470 [Penicillium chrysogenum Wisconsin 54-1255] Length = 217 Score = 41.7 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 3/69 (4%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCY-ALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 F+ T I + Y NA + Y K + +++ LA + D S ++ Sbjct: 51 FFVAGTEKIVQQYQRQRNALP--NIHPFYGHGKCPPDPKLLQLLADMDVSFDCASLAKIE 108 Query: 88 RALAAPVPA 96 + Sbjct: 109 QLKNPSWAG 117 >gi|145299665|ref|YP_001142506.1| arginine decarboxylase [Aeromonas salmonicida subsp. salmonicida A449] gi|166200064|sp|A4SPD6|SPEA_AERS4 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|142852437|gb|ABO90758.1| biosynthetic arginine decarboxylase [Aeromonas salmonicida subsp. salmonicida A449] Length = 633 Score = 41.7 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 73/216 (33%), Gaps = 17/216 (7%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHL---- 74 TP ++ NAF D + Y +K N VI+T++ Sbjct: 60 TPVLLRFPDILKSRVDALFNAFGQAIEKSGYEGDYLCVYPIKVNQQSRVIETISQSYSDK 119 Query: 75 -GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 GL+ S+ EL L+ ++ K + I AL + V E + Sbjct: 120 PRLGLEAGSKPELLAVLSHHHEQGSVIVCNGYKDREYIRHALLGNLMGHKVYIVVEKPSE 179 Query: 134 NQRAVSLGKKAPIAFRVNPD---INANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + + + I + + + S+G KFG+ QI +L +L Sbjct: 180 LEMVLDESARLNIKPNIGVRAKLASTGSGMWESSGGSMSKFGLSASQILALVERLRSLDK 239 Query: 191 VK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR 225 + + + H+GSQI I + +LR Sbjct: 240 LDCLQLLHFHLGSQIANIRDIQGGIRECGRFYSELR 275 >gi|217034353|ref|ZP_03439769.1| hypothetical protein HP9810_491g46 [Helicobacter pylori 98-10] gi|216943238|gb|EEC22705.1| hypothetical protein HP9810_491g46 [Helicobacter pylori 98-10] Length = 615 Score = 41.3 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 106/337 (31%), Gaps = 41/337 (12%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKII-- 272 + +L +LR G + GG ++ H+ +Y + I Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNYTLEEFSADVVFLLREIVK 312 Query: 273 ----------LEPGRFLVADVGILVTKVISIKKSADK 299 +E GR++ A+ +LVT V+ + Sbjct: 313 NKQEIEPDIFIESGRYISANHAVLVTPVLELFSHEYN 349 Score = 37.1 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDHWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|2347054|emb|CAA65585.1| arginine decarboxylase [Vitis vinifera] Length = 630 Score = 41.3 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 98/300 (32%), Gaps = 29/300 (9%) Query: 16 VSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVC 56 + L K+ V Q P ++ + +AFD Sbjct: 4 IDLMKIVKKVSDPKSAGGLGLQLPLIVRLPDVLQNRLESLQSAFDFAIQSQGYESHYQGV 63 Query: 57 YALKANSNQAVIKTLAHLGS----GLDIVSEGE--LRRALAAPVPAERIVFSGVGKTIDE 110 + +K N ++ +++ + GS GL+ S+ E L + E ++ K D Sbjct: 64 FPVKCNQDRFIVEDVVKFGSAFRFGLEAGSKPELLLAMSCLCKGNPEALLVCNGFKDADY 123 Query: 111 IDLALQSG----IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK 166 I LAL + +E E EL + + L + I R H ++G+ Sbjct: 124 IALALVARKLALNTVIVLEQEEELDLVINLSQKLSVRPVIGVRAKLRTKHAGHFGSTSGE 183 Query: 167 KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 K + + + + HIGSQI + + +L Sbjct: 184 KGKFGLTTTQILRVVRKLEQAGMLDSLQLLHFHIGSQIPSTDLLADGVSEAAQIYCELVR 243 Query: 227 NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGIL 286 G +++ ID+GGGLGI Y S + +Y + + R V I Sbjct: 244 LGAHMRVIDIGGGLGIDYDGSKSSESDISVGYGLEEYAMAVVRAVQHVCDRKSVKHPVIC 303 >gi|319792881|ref|YP_004154521.1| alanine racemase domain protein [Variovorax paradoxus EPS] gi|315595344|gb|ADU36410.1| alanine racemase domain protein [Variovorax paradoxus EPS] Length = 379 Score = 41.3 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 8/73 (10%), Positives = 22/73 (30%), Gaps = 1/73 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 + TP ++ N + + +K + + + G+ G+ + Sbjct: 7 ATIDTPAAIVERPRMQHNIARMQARMNALGVRFRPHVKTSKCIDIARAQRDAGAQGITVS 66 Query: 82 SEGELRRALAAPV 94 + E + A Sbjct: 67 TLKEAEQFFVAGF 79 >gi|290962430|ref|YP_003493612.1| amino acid racemase [Streptomyces scabiei 87.22] gi|260651956|emb|CBG75086.1| putative amino acid racemase [Streptomyces scabiei 87.22] Length = 368 Score = 41.3 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 1/80 (1%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 +L+ L + TP ++ N + D + V +K + + + G+ Sbjct: 7 ALDALVERIDTPAPIVLVDVMQGNIDRIQSFADQRNLKVRPHIKTHKCVEIGRRQIAAGA 66 Query: 77 -GLDIVSEGELRRALAAPVP 95 G+ + GE AA Sbjct: 67 VGVTAGNVGEAEVFAAAGFD 86 >gi|311245321|ref|XP_003121782.1| PREDICTED: multiple epidermal growth factor-like domains protein 11-like, partial [Sus scrofa] Length = 884 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 28/251 (11%), Positives = 48/251 (19%), Gaps = 10/251 (3%) Query: 98 RIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA- 156 + G +C N N + A ++ A Sbjct: 28 CCPGYYENGDFCIRCDSDHWGPHCSNRCQCQNGALCNPITGACVCAAGFRGWRCEELCAP 87 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL 216 TH K + + + G A + + H A Sbjct: 88 GTHGKGCQLQCQCRHGASCDPRTGECLCAPG---------YTGVYCEELCPPGSHGAHCE 138 Query: 217 LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPG 276 LR Q + H G A + PP + + + Sbjct: 139 LRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQ 198 Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI 336 +A + + N A P Sbjct: 199 CHCMAGYMGDRCQEECPFGTFGFQCSQRCDCHNGGQCSPTTGACECEPGYKGPRCQERLC 258 Query: 337 HADIVGPICET 347 + GP C + Sbjct: 259 PEGLHGPGCTS 269 >gi|317182285|dbj|BAJ60069.1| arginine decarboxylase [Helicobacter pylori F57] Length = 615 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 89/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|317180168|dbj|BAJ57954.1| arginine decarboxylase [Helicobacter pylori F32] Length = 615 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 89/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 >gi|317177783|dbj|BAJ55572.1| arginine decarboxylase [Helicobacter pylori F16] Length = 615 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 89/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|317009644|gb|ADU80224.1| arginine decarboxylase [Helicobacter pylori India7] Length = 615 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 89/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|261838368|gb|ACX98134.1| arginine decarboxylase [Helicobacter pylori 51] Length = 615 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 89/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPTAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.1 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDHWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|171913043|ref|ZP_02928513.1| arginine decarboxylase [Verrucomicrobium spinosum DSM 4136] Length = 642 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 102/298 (34%), Gaps = 29/298 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMD--------TMVCYALKANSNQAVIKTLAHLG---- 75 P + + +F+ Y +K N Q VI+ + G Sbjct: 65 PVLIRFGDLLRWRIEELNESFNNAIREANYKGVYRGVYPIKVNQQQEVIEEVTRYGRKYH 124 Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GL+ S+ EL ALA E + K + IDLAL++ V E+ + Sbjct: 125 YGLEAGSKPELIAALAYMQDPEAYIVCNGYKDEEFIDLALRAQKMGLQVILVLEMPSELD 184 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDK---FGIPIHQIHSLYAYASTLPGVK 192 + + I ++ I +T + FG+ I Q+ + Sbjct: 185 LILERSRLLGITPQLGVRIRLSTESAGHWSESGGDQSVFGLNISQVMRTVDVLREKGMLD 244 Query: 193 -ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS-DHRP 250 + + H GSQI I + A + L G + +D+GGGL I+Y Sbjct: 245 CLQMLHYHQGSQIPSIRAIRNAAVEAARVYVGLVQEGAKMGILDLGGGLAISYDGLKSNE 304 Query: 251 PSSSDYASLIHQYFG------------NLQCKIILEPGRFLVADVGILVTKVISIKKS 296 SS+DY + II E GR +VA +LV V+ I + Sbjct: 305 TSSADYGMKEYCADVIEAISEVTDEAGIPHPNIISESGRAIVAYYSVLVINVLDINRY 362 >gi|320100688|ref|YP_004176280.1| arginine decarboxylase [Desulfurococcus mucosus DSM 2162] gi|319753040|gb|ADV64798.1| arginine decarboxylase [Desulfurococcus mucosus DSM 2162] Length = 601 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 95/314 (30%), Gaps = 37/314 (11%) Query: 12 HAEN--VSLEKLAHVVQTPFYCYSTTAIE------KNYLTFSNAFD--------GMDTMV 55 V ++ + + I K F Sbjct: 51 SIGGSSVRIKDVMEKYG-----FDVAYIRVLPLIGKAMRLVYETFTELARIHGFKGGLQP 105 Query: 56 CYALKANSNQAVIKTL----AHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 + +K N VI + G G + S GEL RI+ + + Sbjct: 106 VFPMKVNPIDIVIDAIWRYGEKYGWGFNTGSIGELELLSKYAGKGPRILVYDGVLSDNVA 165 Query: 112 DLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF 171 + + V + E + + +S + + R+ P S G + KF Sbjct: 166 RILEGFREKGWRVVVDVESE-HDLDILSKHPELEVGLRIKPLFKPGGKWAHSAGLEG-KF 223 Query: 172 GIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 G+ ++ + L + + + +H GSQI + + ++ QL +NG + Sbjct: 224 GLTVNTLVKLREEYKWIE-ERARLLHVHAGSQIYKWSDVEAFINEVYNIYVQLTANGFSR 282 Query: 232 QHIDVGGGLGIAYH-----SDHRPPSSSDYASLIHQYFGN----LQCKIILEPGRFLVAD 282 + GG + P + H ++ E GR++VA Sbjct: 283 LELVDPGGGLAYPYLDTRSGSIESPDYTVVDYFNHMLRVFSRLDKHPVLVYEGGRYIVAA 342 Query: 283 VGILVTKVISIKKS 296 I+V KV+ ++ Sbjct: 343 HRIVVAKVVDVRPY 356 >gi|326318901|ref|YP_004236573.1| alanine racemase domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375737|gb|ADX48006.1| alanine racemase domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 393 Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 20/62 (32%), Gaps = 3/62 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI---VSE 83 TP A+E+N ++ K + + L G+G VSE Sbjct: 24 TPVAVVDLDAMERNIQRMADFARKHQVRWRPHAKMHKCAELALRLQQAGAGGACVQKVSE 83 Query: 84 GE 85 E Sbjct: 84 AE 85 >gi|71280182|ref|YP_271526.1| putative threonine aldolase [Colwellia psychrerythraea 34H] gi|71145922|gb|AAZ26395.1| putative threonine aldolase [Colwellia psychrerythraea 34H] Length = 382 Score = 41.3 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 26/86 (30%), Gaps = 9/86 (10%) Query: 9 GSLHAENVSLEKLA----HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 L + L +QTP A+E+N M K + + Sbjct: 5 NDLEV-GYDVPALPGMDEADIQTPCLIVDLDALERNITKMGQFAKEMGVRHRVHGKMHKS 63 Query: 65 QAVIKTLAHLG--SGLDI--VSEGEL 86 + LG G+ VSE E+ Sbjct: 64 VDIAFLQEKLGDSCGVCCQKVSEAEV 89 >gi|254521053|ref|ZP_05133108.1| arginine decarboxylase [Stenotrophomonas sp. SKA14] gi|219718644|gb|EED37169.1| arginine decarboxylase [Stenotrophomonas sp. SKA14] Length = 629 Score = 41.3 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 105/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAH---LGS 76 P + + AF Y +K N ++ V TLA G Sbjct: 60 PLLVRFPDILGQRLGKLQAAFAQAQQDWDYTGGYTAVYPIKVNQHRGVAGTLASHHGEGF 119 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + + Sbjct: 120 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELKL 178 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + K + + K ++G + KFG+ Q+ L+ Sbjct: 179 VLEESKALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQLLDLWKSLRDTEYADC 238 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 +S + H+GSQI + + +L G I H+DVGGGLG+ Y Sbjct: 239 LSLLHFHMGSQISNVRDIANGMREATRYFVELSQLGAKITHVDVGGGLGVDYEGTRSRSF 298 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + YAS I + G +I+ E GR + A +L+ V ++++ + Sbjct: 299 CSINYGLNSYASNIVQPLANACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAQEG 358 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 359 RVPDQHDDEPAAIRHLREIH 378 >gi|323492818|ref|ZP_08097960.1| arginine decarboxylase [Vibrio brasiliensis LMG 20546] gi|323312889|gb|EGA66011.1| arginine decarboxylase [Vibrio brasiliensis LMG 20546] Length = 636 Score = 41.3 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 64/344 (18%), Positives = 110/344 (31%), Gaps = 37/344 (10%) Query: 13 AENVSLEKLA-----HVVQTPFYCYSTTAIEKN----YLTFSNAFD----GMDTMVCYAL 59 A + L + + P + + F+ A + + ++ Y + Sbjct: 41 AHQIPLSNIVSQLEQKQLNLPVLVRFPQILHQRVHGICQAFNQAIEENQYQNNYLLVYPI 100 Query: 60 KANSNQAVIKTLAH-------LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID 112 K N + V+ + GL+ S+ EL LA A ++ K + I Sbjct: 101 KVNQQKEVVDEILESQAQLETKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYIR 160 Query: 113 ----LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 +E SEL + + A SLG K + R+ + S G+K Sbjct: 161 LALIGEKLGHKVFIVLEKLSELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKS 220 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 + + + V H+GSQ+ I +LR+ G Sbjct: 221 KFGLAASQVLTVIERLKQEQQLDAMQLVHFHLGSQMANIRDIRNGVNESARFYCELRAMG 280 Query: 229 HNIQHIDVGGGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILEP 275 +I + D+GGGL + Y +YA I Q + II E Sbjct: 281 ADITYFDIGGGLAVDYDGTRSQSSNSMNYGLIEYARNIVSTVGDVCQQYEQPVPVIISES 340 Query: 276 GRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 GR L A +L+T VI + + V + ++ Sbjct: 341 GRSLTAHHAVLITNVIGTEAYHPEQVVAPNAEDPTLLQNMWRSW 384 >gi|163803240|ref|ZP_02197121.1| arginine decarboxylase [Vibrio sp. AND4] gi|159172995|gb|EDP57831.1| arginine decarboxylase [Vibrio sp. AND4] Length = 636 Score = 41.3 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 109/347 (31%), Gaps = 37/347 (10%) Query: 12 HAENVSLEKL-----AHVVQTPFYCYSTTAIEKN----YLTFSNAFDG----MDTMVCYA 58 H + + A + P + + F+ A + ++ Y Sbjct: 40 HMHQIPFSAIVDQLEAKQLNLPVLVRFPQIVHQRVHGICQAFNQAIEEYQYPNKYLLVYP 99 Query: 59 LKANSNQAVIKT-------LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 +K N + V+ L + GL+ S+ EL LA ++ K + + Sbjct: 100 IKVNQQREVVDEILASQAQLENKQLGLEAGSKPELLAVLALAQQGSSVIVCNGYKDREYV 159 Query: 112 D----LALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKK 167 +E SEL + + A SLG + R+ + S G+K Sbjct: 160 RLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVTPRLGLRIRLASQGAGKWQASGGEK 219 Query: 168 EDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSN 227 + + + V H+GSQ+ I +LR+ Sbjct: 220 SKFGLSASQVLSVIGRLKREDQLGTMQLVHFHLGSQMANIRDVRNGVNESARFYCELRAM 279 Query: 228 GHNIQHIDVGGGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILE 274 G NI + DVGGGL + Y ++YA I Q + II E Sbjct: 280 GANIDYFDVGGGLAVDYDGTRSQSSNSMNYGLAEYARNIVNTVGDVCQQYEQPMPVIISE 339 Query: 275 PGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 GR L A +L++ VI + + ++ + + Sbjct: 340 SGRSLTAHHAVLISNVIGNETYQPEEVFEPAADAPFLLQNMWRNWQN 386 >gi|116511664|ref|YP_808880.1| alanine racemase [Lactococcus lactis subsp. cremoris SK11] gi|123125695|sp|Q030B4|ALR_LACLS RecName: Full=Alanine racemase gi|116107318|gb|ABJ72458.1| alanine racemase [Lactococcus lactis subsp. cremoris SK11] Length = 367 Score = 41.3 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 5/59 (8%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKA----NSNQAVIKTLAHLGSGLDIVSEGE 85 AI N F + + A+KA + + V K ++ L G + + E Sbjct: 12 IVDLKAIRNNIEKFKKHI-NPNAEIWPAVKADAYGHGSVEVSKAVSDLVGGFCVSNLDE 69 >gi|195976673|dbj|BAG68575.1| arginine decarboxylase [Prunus persica] Length = 725 Score = 41.3 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 23/104 (22%) Query: 16 VSLEKLAHVV-----------QTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVC 56 + L K+ V Q P ++ + AFD G Sbjct: 89 IDLLKIVKKVSDPKPDCGLGLQLPLIVRLPDVLKNRLESLQGAFDLAIQSHDYGSHYQGV 148 Query: 57 YALKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPA 96 + +K N ++ V++ + GS GL+ S+ EL A++ Sbjct: 149 FPVKCNQDRFVVEDIVRFGSPFRFGLEAGSKPELLLAMSCLCKG 192 >gi|331015908|gb|EGH95964.1| hypothetical protein PLA106_07905 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 378 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 23/65 (35%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +++N + + + +K + + VI+ G+ G+ + + E Sbjct: 10 TPVALLDMPRMQRNIQRMQQRMNELGVRLRPHVKTSKSLPVIQAQMAAGARGVTVSTLKE 69 Query: 86 LRRAL 90 Sbjct: 70 AEHCF 74 >gi|213968918|ref|ZP_03397058.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|213926217|gb|EEB59772.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 378 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 23/65 (35%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +++N + + + +K + + VI+ G+ G+ + + E Sbjct: 10 TPVALLDMPRMQRNIQRMQQRMNELGVRLRPHVKTSKSLPVIQAQMAAGARGVTVSTLKE 69 Query: 86 LRRAL 90 Sbjct: 70 AEHCF 74 >gi|153952578|ref|YP_001398308.1| arginine decarboxylase [Campylobacter jejuni subsp. doylei 269.97] gi|152940024|gb|ABS44765.1| arginine decarboxylase [Campylobacter jejuni subsp. doylei 269.97] Length = 610 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 83/278 (29%), Gaps = 24/278 (8%) Query: 3 AFKYFEGSLHAE---NVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--- 51 F G + ++ + + P I+K F+ Sbjct: 12 NFIIKNGKVCINHEKKPAIVDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKAKKE 71 Query: 52 -----DTMVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFS 102 Y LK N +K L LG GL+ S+ EL A+A I + Sbjct: 72 FGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVN 131 Query: 103 ---GVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTH 159 A +E +EL+ + A K P +A Sbjct: 132 GFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVG 191 Query: 160 KKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLR 218 +G KFG+ ++ ++ + + H+GSQI +I KA Sbjct: 192 IWAKSGGINSKFGLTSTELIEAVNLLKENKFLEQFTMIHFHLGSQITEIHPLKKALNEAG 251 Query: 219 DLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 ++ +LR G GG +S + + +Y Sbjct: 252 NIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKNRNY 289 >gi|28870797|ref|NP_793416.1| hypothetical protein PSPTO_3640 [Pseudomonas syringae pv. tomato str. DC3000] gi|28854046|gb|AAO57111.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 378 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 23/65 (35%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +++N + + + +K + + VI+ G+ G+ + + E Sbjct: 10 TPVALLDMPRMQRNIQRMQQRMNELGVRLRPHVKTSKSLPVIQAQMAAGARGVTVSTLKE 69 Query: 86 LRRAL 90 Sbjct: 70 AEHCF 74 >gi|317011227|gb|ADU84974.1| arginine decarboxylase [Helicobacter pylori SouthAfrica7] Length = 615 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 89/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFD---- 49 + FK +G + +N +L ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPALLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSLAIK 74 Query: 50 ----GMDTMVCYALKANSNQA-VIKTL---AHLGSGLDIVSEGELRRALAAPVPAERIVF 101 + LK N + V+ + L GL+ S+ EL + + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLNYGLEAGSKSEL-IIAMSYTNPKAPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.1 bits (84), Expect = 4.9, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 27/97 (27%), Gaps = 12/97 (12%) Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNR----KIALPRPGD---LLYIEKTGAYG 375 +N ++ A + C++ IA + + + L GAY Sbjct: 465 PVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQ 524 Query: 376 AVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 V +N E + + + I T Sbjct: 525 EVLGMKHNLFTHPTELSVVFDEKGDYEVEDICEAQTI 561 >gi|255101991|ref|ZP_05330968.1| putative amino acid racemase [Clostridium difficile QCD-63q42] gi|255307859|ref|ZP_05352030.1| putative amino acid racemase [Clostridium difficile ATCC 43255] Length = 370 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 1/110 (0%) Query: 24 VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVS 82 V TP + +EKN + + LK + + + + + G+ G + Sbjct: 5 EVATPNFLLDLDQLEKNIDKIQQICTNNNKQLWPMLKTHKSTYIARLQKNAGASGFLAGT 64 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 E + A + + +G+ + + S I E Sbjct: 65 LDEGEALIKAGFEDIMLAYPYMGEVNINRIVTMASKINLICATDNIECAK 114 >gi|2558608|emb|CAA74609.1| ornithine decarboxylase [Plasmodium falciparum] Length = 253 Score = 41.3 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 13/185 (7%) Query: 59 LKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQ 116 +K N+++ VIK L L D S GE+ + + +RI+F+ K+I+ + A + Sbjct: 6 VKCNNDEVVIKFLHGLNCNFDCASIGEISKVIKLLPNLSRDRIIFANTIKSINSLIYARK 65 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 I ++ LK + + I K+G + Sbjct: 66 ENINLCTFDNLDVLKKIYKYHPKCSLILRINVDFKN----------YKSYMSSKYGANEY 115 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + + YA + I GV H+GS + F A KL RD+ + G N I++ Sbjct: 116 EWEEMLLYAKKH-NLNIVGVSFHVGSNTKNLFDFCLAIKLCRDVFDMSSNMGFNFYIINL 174 Query: 237 GGGLG 241 GGG Sbjct: 175 GGGYP 179 >gi|163740918|ref|ZP_02148311.1| hypothetical protein RG210_13796 [Phaeobacter gallaeciensis 2.10] gi|161385909|gb|EDQ10285.1| hypothetical protein RG210_13796 [Phaeobacter gallaeciensis 2.10] Length = 382 Score = 41.3 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 24/60 (40%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 +QTP T + +N + DG+ + LK + + + L GSG VS Sbjct: 9 KNLQTPALVLDETKMMRNIQRLAKQVDGLGVSLRPHLKTVKSTEISRRLLTDGSGPATVS 68 >gi|37523639|ref|NP_927016.1| arginine decarboxylase [Gloeobacter violaceus PCC 7421] gi|48474347|sp|Q7NE10|SPEA_GLOVI RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|35214644|dbj|BAC92011.1| arginine decarboxylase [Gloeobacter violaceus PCC 7421] Length = 644 Score = 41.3 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 103/324 (31%), Gaps = 31/324 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAF---------DGMDTMVCYALKANSNQAVIKTLAHLG--- 75 P + + + F G+ Y +K N + V++ + G Sbjct: 60 PMLIRFSDILADRIARLNACFVEAIREYDYPGI-YKGVYPVKVNQQRHVVEEVVEFGRPF 118 Query: 76 -SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA----LQSGIYCFNVESESEL 130 GL+ S+ EL ALA ++ K + I+ A +E EL Sbjct: 119 QYGLEAGSKPELLIALATLKTPGALIICNGYKDSEYIETALLAQRLGHTPFVVIERFHEL 178 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 L + A LG + I R STG + + + + Sbjct: 179 TLLIEAAQKLGIRPLIGVRAKLTARGIGRWGDSTGDRAKFGLSAGEIMEVVAQLKAADLL 238 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH-- 248 + + HIGSQI I A + + +L G +Q+ DVGGGL I Y Sbjct: 239 SSLQLLHFHIGSQISAINVIKTALREASCVYVELAQMGAPMQYCDVGGGLAIDYDGSKTN 298 Query: 249 ----RPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIKKSA 297 + + +YA + F + ++ E GR + + +LV V+ + Sbjct: 299 FRASKNYNMQEYAYDVVAAFQDACRTKNVPVPTLVSESGRAITSHQSVLVFDVMGVSHLQ 358 Query: 298 DKTFVILDVAMNDFMRPTLYDAYH 321 + +R Sbjct: 359 FGEPEPPARNEHSIIRNLYETYTQ 382 >gi|3915009|sp|Q39827|SPE1_SOYBN RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC gi|1163181|gb|AAD09204.1| arginine decarboxylase [Glycine max] Length = 692 Score = 41.3 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 23/104 (22%) Query: 16 VSLEKLAHV-----------VQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVC 56 + L K+ +Q P ++ + +AFD Sbjct: 90 IDLLKIVKKASDPKSLGGLSLQLPLIARFPDVLKNRLESLQSAFDYAIQSGGYESHYQGV 149 Query: 57 YALKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPA 96 Y +K N ++ V++ + GS GL+ S+ EL A++ Sbjct: 150 YPVKCNQDRFVVEDIVKFGSPFRFGLEAGSKPELLLAMSCLCKG 193 >gi|239834636|ref|ZP_04682964.1| Serine racemase [Ochrobactrum intermedium LMG 3301] gi|239822699|gb|EEQ94268.1| Serine racemase [Ochrobactrum intermedium LMG 3301] Length = 418 Score = 41.3 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 3/62 (4%) Query: 26 QTPFYC-YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSE 83 QTP Y + +N D + +K + + + LG+ G+ Sbjct: 53 QTP-YVEIDEDRLIRNLKEMQQKADKAGVRLRPHIKTHKSLMIANRQLQLGAIGVTASKP 111 Query: 84 GE 85 E Sbjct: 112 DE 113 >gi|238788038|ref|ZP_04631834.1| hypothetical protein yfred0001_15280 [Yersinia frederiksenii ATCC 33641] gi|238723986|gb|EEQ15630.1| hypothetical protein yfred0001_15280 [Yersinia frederiksenii ATCC 33641] Length = 391 Score = 41.3 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 24/90 (26%), Gaps = 2/90 (2%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLGS-GLDIVSEGELR 87 Y +++N + K N + + L G G+ V E R Sbjct: 31 YVIDVDQVKQNARLLLATAARYGITLYLMSKQFGRNPQLCRLLLECGYQGIVAVDFKEAR 90 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQS 117 + +P + + ++ Sbjct: 91 QLYRHNLPVAHVGHLVQIPSAMVDEVVAHH 120 >gi|160935372|ref|ZP_02082754.1| hypothetical protein CLOBOL_00267 [Clostridium bolteae ATCC BAA-613] gi|158441730|gb|EDP19430.1| hypothetical protein CLOBOL_00267 [Clostridium bolteae ATCC BAA-613] Length = 371 Score = 41.0 bits (94), Expect = 0.34, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 2/63 (3%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP Y IE+N + + + +K++ + +++ +G + E Sbjct: 16 TPCLIYYKDIIEQNIKEMISVAGNAN-RLWPHVKSHKMKKLVELQIKMGITRFKCATIAE 74 Query: 86 LRR 88 + Sbjct: 75 AQM 77 >gi|255543883|ref|XP_002513004.1| arginine decarboxylase, putative [Ricinus communis] gi|223548015|gb|EEF49507.1| arginine decarboxylase, putative [Ricinus communis] Length = 724 Score = 41.0 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 92/291 (31%), Gaps = 29/291 (9%) Query: 16 VSLEKLAHVVQTP-----------FYCYSTTAIEKNYLTFSNAFD--------GMDTMVC 56 + L K+ V P ++ + +AF+ Sbjct: 92 IDLMKIVKKVSDPKSLGGLGLQLPLIVRLPDILKNRLESLQSAFNFAIQSQGYDSHYQGV 151 Query: 57 YALKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAE------RIVFSGVGK 106 Y +K N ++ V++ + GS GL+ S+ EL A++ F Sbjct: 152 YPVKCNQDRFVVEDIVRFGSPFRFGLEAGSKPELLLAMSCLCKGSPDALLVCNGFKDGEY 211 Query: 107 TIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK 166 + + +E E EL + + + + I R + H ++G+ Sbjct: 212 ISLALLARKLALNTVIVLEQEEELDLVIGLSKKMSVRPVIGVRAKLRTRHSGHFGSTSGE 271 Query: 167 KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRS 226 K I + + + + HIGSQI + +L Sbjct: 272 KGKFGLTTIQILRVVKKLEEAGMLDCLQLLHFHIGSQIPSTSLLADGVGEAAQIYCELVR 331 Query: 227 NGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGR 277 G N+Q ID+GGGLGI Y S A + +Y + + R Sbjct: 332 LGANMQVIDIGGGLGIDYDGSKSGNSDLSVAYGLEEYALAVVQAVKFVCDR 382 >gi|91778101|ref|YP_553309.1| metal-activated pyridoxal protein [Burkholderia xenovorans LB400] gi|91690761|gb|ABE33959.1| Metal-activated pyridoxal enzyme [Burkholderia xenovorans LB400] Length = 379 Score = 41.0 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 1/71 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 ++TP ++KN + + +K V++ G+ G+ + Sbjct: 4 DQIETPAALIDIARMQKNIARMQGHMNTLGVAFRPHVKTTKCIDVVRAQIAAGARGITVS 63 Query: 82 SEGELRRALAA 92 + E AA Sbjct: 64 TLKEAEAFFAA 74 >gi|326406390|gb|ADZ63461.1| alanine racemase [Lactococcus lactis subsp. lactis CV56] Length = 367 Score = 41.0 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 5/59 (8%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKA----NSNQAVIKTLAHLGSGLDIVSEGE 85 AI N F + + A+KA + + V K ++ L G + + E Sbjct: 12 IVDLKAIRNNIEKFKKHI-HPNAEIWPAVKADAYGHGSVEVSKAVSDLVGGFCVSNLDE 69 >gi|15672826|ref|NP_267000.1| alanine racemase [Lactococcus lactis subsp. lactis Il1403] gi|281491333|ref|YP_003353313.1| alanine racemase [Lactococcus lactis subsp. lactis KF147] gi|20137230|sp|Q9CH94|ALR_LACLA RecName: Full=Alanine racemase gi|12723770|gb|AAK04942.1|AE006318_5 alanine racemase [Lactococcus lactis subsp. lactis Il1403] gi|281375074|gb|ADA64592.1| Alanine racemase [Lactococcus lactis subsp. lactis KF147] Length = 367 Score = 41.0 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 5/59 (8%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKA----NSNQAVIKTLAHLGSGLDIVSEGE 85 AI N F + + A+KA + + V K ++ L G + + E Sbjct: 12 IVDLKAIRNNIEKFKKHI-HPNAEIWPAVKADAYGHGSVEVSKAVSDLVGGFCVSNLDE 69 >gi|152981391|ref|YP_001352131.1| low-specificity D-threonine aldolase [Janthinobacterium sp. Marseille] gi|151281468|gb|ABR89878.1| low-specificity D-threonine aldolase [Janthinobacterium sp. Marseille] Length = 380 Score = 41.0 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 20/64 (31%), Gaps = 1/64 (1%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSE 83 V TP A + N + + KA+ + A+ LG+ G+ Sbjct: 22 VSTPALVLDLDAFDANTQRMAELARRHGVALRPHAKAHKSTAIALRQLELGAVGVCCQKM 81 Query: 84 GELR 87 E Sbjct: 82 SEAY 85 >gi|109947192|ref|YP_664420.1| arginine decarboxylase [Helicobacter acinonychis str. Sheeba] gi|109714413|emb|CAJ99421.1| arginine decarboxylase [Helicobacter acinonychis str. Sheeba] Length = 615 Score = 41.0 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 90/281 (32%), Gaps = 27/281 (9%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFD---- 49 + FK +G + +N +L ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPALLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSLAIK 74 Query: 50 ----GMDTMVCYALKANSNQA-VIKTL---AHLGSGLDIVSEGELRRALAAPVPAERIVF 101 + LK N + V+ + L GL+ S+ EL + + + Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLNYGLEAGSKSEL-IIAMSYTNPKTPIT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI-----NA 156 K + I+L + + E + +++ K+ I + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLICPKIGIRIRLHST 193 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFK 215 +G KFG+ ++ + HIGSQI I KA + Sbjct: 194 GIGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKALR 253 Query: 216 LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 +L +LR G + GG ++ H+ +Y Sbjct: 254 EAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.1 bits (84), Expect = 4.9, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 27/97 (27%), Gaps = 12/97 (12%) Query: 323 INYIVNPAGDRLHIHADIVGPICETGDFIALNR----KIALPRPGD---LLYIEKTGAYG 375 +N ++ A + C++ IA + + + L GAY Sbjct: 465 PVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQ 524 Query: 376 AVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 V +N E + + + I T Sbjct: 525 EVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|119716914|ref|YP_923879.1| alanine racemase domain-containing protein [Nocardioides sp. JS614] gi|119537575|gb|ABL82192.1| alanine racemase domain protein [Nocardioides sp. JS614] Length = 360 Score = 41.0 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP+ + N + + K + + + + G+ GL + + GE Sbjct: 10 TPYLRVDVARLRANIERTTRWAAAGGVSLRPHAKTHKSPDIARLQLAAGAIGLTVATIGE 69 Query: 86 LRRALAA 92 + Sbjct: 70 AEVFVEH 76 >gi|301061165|ref|ZP_07201954.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300444707|gb|EFK08683.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 365 Score = 41.0 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 7/141 (4%) Query: 12 HAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVC-YALKANSNQAVIKT 70 H N L +LA TPFY Y+ + + + +A D + + Y L N +QAV++ Sbjct: 10 HFRNEELVELAEAH-TPFYVYNEETLNEIFFDL-SAMDALSGLFYPYHL--NFHQAVLQK 65 Query: 71 LAHLGSGLDIVSEGELRRALAAPV--PAERIVFSGVGKTIDEIDLALQSGIYCFNVESES 128 L + S E P RI F K E + A G++ ++ Sbjct: 66 AFDLDAYFRCNSLLEADHLRDHFPKLPPSRIFFLSDHKHKRECEDAAHQGLHVAVRADKN 125 Query: 129 ELKTLNQRAVSLGKKAPIAFR 149 + + + Sbjct: 126 TMNACLEAFQDKSIFLCLDMG 146 >gi|315586925|gb|ADU41306.1| arginine 2-monooxygenase [Helicobacter pylori 35A] Length = 615 Score = 41.0 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 89/282 (31%), Gaps = 29/282 (10%) Query: 2 SAFKYFEGSLHA---ENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 + FK +G + +N SL ++ + P ++K + +AF Sbjct: 15 NEFKIEKGLVKVCHGKNPSLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSSAIK 74 Query: 54 MVCYA--------LKANSNQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y+ LK N + +++ L GL+ S+ EL + V Sbjct: 75 EYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPTAPVT 133 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ------RAVSLGKKAPIAFRVNPDIN 155 K + I+L + + E + + I R+ + Sbjct: 134 VNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQNEFLACPKIGIRIRL-HS 192 Query: 156 ANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAF 214 T +G KFG+ ++ + HIGSQI I KA Sbjct: 193 TGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKAL 252 Query: 215 KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 + +L +LR G + GG ++ H+ +Y Sbjct: 253 REAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKHHQDKNY 294 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|187779310|ref|ZP_02995783.1| hypothetical protein CLOSPO_02906 [Clostridium sporogenes ATCC 15579] gi|187772935|gb|EDU36737.1| hypothetical protein CLOSPO_02906 [Clostridium sporogenes ATCC 15579] Length = 386 Score = 41.0 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 12/47 (25%), Gaps = 1/47 (2%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLG 75 Y I N D + + K N V L LG Sbjct: 31 YIIDLDNIVDNARKIKEEADKYGIELYFMTKQFGRNPIVCHELMKLG 77 >gi|120612870|ref|YP_972548.1| putative threonine aldolase [Acidovorax citrulli AAC00-1] gi|120591334|gb|ABM34774.1| putative threonine aldolase [Acidovorax citrulli AAC00-1] Length = 392 Score = 41.0 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 19/62 (30%), Gaps = 3/62 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI---VSE 83 TP A+E+N + K + + L G+G VSE Sbjct: 24 TPAAVVDLDAMERNIQRMAEFARKHQVRWRPHAKMHKCAELALRLQQAGAGGACVQKVSE 83 Query: 84 GE 85 E Sbjct: 84 AE 85 >gi|67541953|ref|XP_664744.1| hypothetical protein AN7140.2 [Aspergillus nidulans FGSC A4] gi|40742202|gb|EAA61392.1| hypothetical protein AN7140.2 [Aspergillus nidulans FGSC A4] gi|259483529|tpe|CBF78993.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 414 Score = 41.0 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 6/75 (8%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + +L TP S IE+N + + +K + V + + Sbjct: 9 GKPVTEL----PTPALVLSKPTIERNIKQLLQDVERLGIAFRPHVKTLKSLEVTRMMLGN 64 Query: 75 GSG--LDIVSEGELR 87 G + + E+ Sbjct: 65 GQHRRIVASTLPEIE 79 >gi|301612125|ref|XP_002935580.1| PREDICTED: NFX1-type zinc finger-containing protein 1-like, partial [Xenopus (Silurana) tropicalis] Length = 1940 Score = 41.0 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 17/231 (7%), Positives = 43/231 (18%), Gaps = 6/231 (2%) Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179 E + L ++ + + + + Sbjct: 1343 CHPYDPEHKEYQCNKPCQKILCEEGHRCKKTCFKPCGPCMELVPKNMPLCGHVQMVPCSI 1402 Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 + + +P K G + H + +L + D+ G Sbjct: 1403 PVRTFCCEIPCTKFLSCGHQCGKLCGEECEDHCIQDVEAELKCGHIQKIKCWKKRDIEFG 1462 Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 + + S + + + R + I + Sbjct: 1463 MPVQCRKPCHATLSCGHKCPGNCHSCTQ--GRFHVTCRHPCKRLLICSHPCQEPCTNECP 1520 Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC-ETGD 349 + + + H G +C E D Sbjct: 1521 PCNRVCRNRCIHSQCKKKCGERCTPCMEPCDWKCEHYT---CGKLCSEPCD 1568 >gi|167534547|ref|XP_001748949.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772629|gb|EDQ86279.1| predicted protein [Monosiga brevicollis MX1] Length = 498 Score = 41.0 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 18/60 (30%), Gaps = 1/60 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDT-MVCYALKANSNQAVIKTLAHLGSGLDIV 81 + TP TA+E+N T G + K + ++ G+ Sbjct: 101 AEIDTPALLVDMTALERNLGTMRKVMAGFPHMRLRPHAKTHKTPYLVDLQLQNGAAAVCC 160 >gi|134292751|ref|YP_001116487.1| alanine racemase domain-containing protein [Burkholderia vietnamiensis G4] gi|134135908|gb|ABO57022.1| alanine racemase domain protein [Burkholderia vietnamiensis G4] Length = 376 Score = 41.0 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 18/65 (27%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + N D +K Q V+ G+ G+ + + E Sbjct: 8 TPAALIDVDRMHANIARLHAHLDAFGVAFRPHVKTTKCQQVVDAQIAAGARGITVSTLKE 67 Query: 86 LRRAL 90 + Sbjct: 68 AEQFF 72 >gi|317034639|ref|XP_001400774.2| hypothetical protein ANI_1_238124 [Aspergillus niger CBS 513.88] Length = 416 Score = 41.0 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 24/89 (26%), Gaps = 8/89 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F + L TP S +EKN + +K Sbjct: 1 MD-FSLQSHASFI-GRPASDL----PTPSLILSKPVLEKNINRLQQDVQELGLSFRPHVK 54 Query: 61 ANSNQAVIKTLAHLGS--GLDIVSEGELR 87 + + + G GL + ELR Sbjct: 55 TLKTLEITRLMLANGLHRGLIASTLSELR 83 >gi|300703088|ref|YP_003744690.1| hypothetical protein RCFBP_10743 [Ralstonia solanacearum CFBP2957] gi|299070751|emb|CBJ42046.1| conserved protein of unknown function, Alanine racemase domain protein [Ralstonia solanacearum CFBP2957] Length = 376 Score = 41.0 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + N D + +K + V++ G+ G+ + + E Sbjct: 8 TPAALIDVARMTGNIARMQQRLDALGVRFRPHVKTTKCEPVVRAQLDAGAQGITVSTLKE 67 Query: 86 LRRALAA 92 + AA Sbjct: 68 AEQFFAA 74 >gi|207721615|ref|YP_002252054.1| alanine racemase [Ralstonia solanacearum MolK2] gi|206586776|emb|CAQ17361.1| ipr001608 alanine racemase, n-terminal protein [Ralstonia solanacearum MolK2] Length = 376 Score = 41.0 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + N D + +K + V++ G+ G+ + + E Sbjct: 8 TPAALIDVARMTGNIARMQQRLDALGVRFRPHVKTTKCEPVVRAQLDAGAQGITVSTLKE 67 Query: 86 LRRALAA 92 + AA Sbjct: 68 AEQFFAA 74 >gi|134081446|emb|CAK41927.1| unnamed protein product [Aspergillus niger] Length = 424 Score = 41.0 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 24/89 (26%), Gaps = 8/89 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F + L TP S +EKN + +K Sbjct: 1 MD-FSLQSHASFI-GRPASDL----PTPSLILSKPVLEKNINRLQQDVQELGLSFRPHVK 54 Query: 61 ANSNQAVIKTLAHLGS--GLDIVSEGELR 87 + + + G GL + ELR Sbjct: 55 TLKTLEITRLMLANGLHRGLIASTLSELR 83 >gi|303327206|ref|ZP_07357648.1| putative alanine racemase, N- domain protein [Desulfovibrio sp. 3_1_syn3] gi|302863194|gb|EFL86126.1| putative alanine racemase, N- domain protein [Desulfovibrio sp. 3_1_syn3] Length = 193 Score = 41.0 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 5/45 (11%), Positives = 11/45 (24%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 TP + +N + + K + V + Sbjct: 2 PTPSLLLDEARLRRNIARLDERLRALGVALRPHCKTCKSMDVARL 46 >gi|257452886|ref|ZP_05618185.1| alanine racemase, biosynthetic [Fusobacterium sp. 3_1_5R] gi|257466749|ref|ZP_05631060.1| alanine racemase, biosynthetic [Fusobacterium gonidiaformans ATCC 25563] gi|315917898|ref|ZP_07914138.1| alanine racemase [Fusobacterium gonidiaformans ATCC 25563] gi|317059428|ref|ZP_07923913.1| alanine racemase [Fusobacterium sp. 3_1_5R] gi|313685104|gb|EFS21939.1| alanine racemase [Fusobacterium sp. 3_1_5R] gi|313691773|gb|EFS28608.1| alanine racemase [Fusobacterium gonidiaformans ATCC 25563] Length = 354 Score = 41.0 bits (94), Expect = 0.43, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 24/74 (32%), Gaps = 7/74 (9%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN----QAVIKTLAHLGSG-LDIVSEGEL 86 T + N +G +KAN+ V K LA G + S E Sbjct: 7 IDTENLRHNIREIQKRAEGFGVWGV--IKANAYGLGVLPVAKILAEEGIHYFAVASLEEA 64 Query: 87 RRALAAPVPAERIV 100 + A + E ++ Sbjct: 65 KEVRNANITGEILI 78 >gi|198283310|ref|YP_002219631.1| arginine decarboxylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667242|ref|YP_002425898.1| arginine decarboxylase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247831|gb|ACH83424.1| arginine decarboxylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519455|gb|ACK80041.1| arginine decarboxylase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 637 Score = 41.0 bits (94), Expect = 0.43, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 98/307 (31%), Gaps = 27/307 (8%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGS- 76 P + AF Y +K N + V++ + G+ Sbjct: 58 GLPCLLRFPQILGDRVARLHGAFGDAIRALDYKGSFTPVYPIKVNQQRRVVEEILRAGAG 117 Query: 77 --GLDIVSEGELRRALAAPVPAERIVFS---GVGKTIDEIDLALQSGIYCFNVESESELK 131 GL+ S+ EL + I+ + + VE SEL Sbjct: 118 SVGLEAGSKPELLAVIGLMPVGGTIICNGYKDKEYIRLALTGEKLGMQVYLVVEKPSELP 177 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + A LG K I R + + + G+K + ++ + Sbjct: 178 LILNEASRLGVKPRIGVRARLASAGSGKWQNTGGEKSKFGLSTADILELVHRLRAENALD 237 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + + H+GSQI I+ + L +LR G ++ +DVGGGLG+ Y H Sbjct: 238 SLQLLHFHLGSQIPNIQFIRGGMRECARLYAELRRLGAALEVVDVGGGLGVDYEGTHSRA 297 Query: 252 SSSDYASLIHQYFGN-------------LQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 S + + +II E GR L A ILV V ++ +A Sbjct: 298 YCSTNYHVSDYAHAIVATLADVSRQEGLPEPRIISESGRALTAHHAILVANVSDVEMAAG 357 Query: 299 KTFVILD 305 + Sbjct: 358 EHPPSTP 364 >gi|326434921|gb|EGD80491.1| tenascin C [Salpingoeca sp. ATCC 50818] Length = 8565 Score = 40.6 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 14/266 (5%), Positives = 38/266 (14%), Gaps = 2/266 (0%) Query: 77 GLDIVSEGEL-RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 GLD GE G + ++ Sbjct: 2241 GLDCSGHGECNAATTECVCSPGWAGIGCHIPDCPGTPDCNGRGFCNATAPGQPTCQSCED 2300 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + P +++ K + + + Sbjct: 2301 GWMGPACEQPCVHGHQEPMDSGYCKCDPGWSGRGCDAMCSGHGVIVDGKCDCYTTEVGNS 2360 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH-NIQHIDVGGGLGIAYHSDHRPPSSS 254 + + + I + + + Sbjct: 2361 WRGELCDRPGCPGENGNCNGHGECNGATGECVCDGAWRGIACEEPVCPGNPPCNNQGTCD 2420 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 L A+ + T + + Sbjct: 2421 PLTQQCQCNSNFTGPDCSLPCVHGAFANQTAGCVCEDCYTGISCDTVCGDHGDCVNGVCQ 2480 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADI 340 +D + P + Sbjct: 2481 CDFDLGYSGPGCEIPGCPGSSSTVQV 2506 >gi|301167358|emb|CBW26940.1| putative arginine decarboxylase [Bacteriovorax marinus SJ] Length = 635 Score = 40.6 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 117/342 (34%), Gaps = 33/342 (9%) Query: 7 FEGSLHAENVSLEKLAHV-VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCY 57 G +V ++++ V+ P + + F Y Sbjct: 41 KSGEFDIASV-IKEMKEQGVKFPAVIRFHDILRSRVRLINKVFRETIEEYDYEGRYYGVY 99 Query: 58 ALKANSNQAVIKTLAHLGS----GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 +K N + V++ + G GL+ S+ EL L A +++ + G D+ Sbjct: 100 PIKVNQMREVVEEIIDAGLKYDYGLEAGSKPELLAVL-AMNDSKKALTILNGYKDDDYMK 158 Query: 114 ALQSGI-----YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 G +E SE+K + + + +G + I R + S+G++ Sbjct: 159 LALLGREVGRKIIIVIEKFSEIKKIIRLSKEVGVEPLIGLRGKMSVPGCGRWSGSSGERA 218 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 + ++ + + G I HIGSQI +I SF +A + +L G Sbjct: 219 KFGLSVSEMLQAVELFRANGLGDCIKLFHFHIGSQIPEIRSFKEAISEGGRIYAKLVQAG 278 Query: 229 HNIQHIDVGGGLGIAYH------SDHRPPSSSDYA-------SLIHQYFGNLQCKIILEP 275 +++ D+GGGLG+ Y S S+Y I G I+ E Sbjct: 279 VPLEYFDIGGGLGVDYDGTRTINDSSTNYSLSEYVADVIYSLKQICDLEGVTHPNIVTES 338 Query: 276 GRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 GR + A +VT VI + + F+ Sbjct: 339 GRAVTAHHSCVVTNVIGKIDATSDFNTKKVTGEHIFVSNMRE 380 Score = 37.9 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 10/77 (12%) Query: 331 GDRLHIHADIVGPICET---GDFIALN------RKIALPRPGDL-LYIEKTGAYGAVQSG 380 ++ ++ I C++ D + D L I TGAY V Sbjct: 487 HEKPTVNCSIADITCDSDGKIDKFIDETGHRTTFPVHELGEEDYYLGIFLTGAYQDVMGD 546 Query: 381 TYNSRLLIPEIMVNGSQ 397 +N + E+ V + Sbjct: 547 MHNLFGRLNEVHVFKDE 563 >gi|237799332|ref|ZP_04587793.1| hypothetical protein POR16_10901 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022188|gb|EGI02245.1| hypothetical protein POR16_10901 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 381 Score = 40.6 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 23/65 (35%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +++N + + + +K + + VI+ G+ G+ + + E Sbjct: 13 TPVALLDVPRMQRNIQRMQQRMNELGVRLRPHVKTSKSLPVIQAQIAAGASGVTVSTLKE 72 Query: 86 LRRAL 90 Sbjct: 73 AAHCF 77 >gi|312961902|ref|ZP_07776399.1| alanine racemase [Pseudomonas fluorescens WH6] gi|311283712|gb|EFQ62296.1| alanine racemase [Pseudomonas fluorescens WH6] Length = 378 Score = 40.6 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP +++N + + + +K + VI G+ G+ + + E Sbjct: 10 TPAALIDIPRMQRNIQRMQQRLNDLGVRLRPHIKTSKCLPVIHAQIAAGASGVTVSTLKE 69 Query: 86 LRRALAA 92 + AA Sbjct: 70 AQHCFAA 76 >gi|167038850|ref|YP_001661835.1| amino acid racemase-like protein [Thermoanaerobacter sp. X514] gi|300913565|ref|ZP_07130882.1| alanine racemase domain protein [Thermoanaerobacter sp. X561] gi|307723420|ref|YP_003903171.1| alanine racemase domain-containing protein [Thermoanaerobacter sp. X513] gi|166853090|gb|ABY91499.1| amino acid racemase-like protein [Thermoanaerobacter sp. X514] gi|300890250|gb|EFK85395.1| alanine racemase domain protein [Thermoanaerobacter sp. X561] gi|307580481|gb|ADN53880.1| alanine racemase domain protein [Thermoanaerobacter sp. X513] Length = 398 Score = 40.6 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 1/48 (2%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLGS 76 Y +I +N D + + Y K N + K + G Sbjct: 31 YVLDVDSIYENARLIKETADKYNISLYYMTKQFGRNPIISKIIEKAGI 78 >gi|255539084|ref|XP_002510607.1| ornithine decarboxylase, putative [Ricinus communis] gi|223551308|gb|EEF52794.1| ornithine decarboxylase, putative [Ricinus communis] Length = 78 Score = 40.6 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 17/35 (48%) Query: 53 TMVCYALKANSNQAVIKTLAHLGSGLDIVSEGELR 87 YA+K N + TLA LGS D S +L+ Sbjct: 11 VRPLYAVKCNPEPTPVGTLATLGSNFDCASRADLK 45 >gi|220923057|ref|YP_002498359.1| alanine racemase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219947664|gb|ACL58056.1| alanine racemase domain protein [Methylobacterium nodulans ORS 2060] Length = 393 Score = 40.6 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 7/48 (14%), Positives = 12/48 (25%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 +QTP + N + LK + V + Sbjct: 20 DALQTPCLLLDEVRLRANVERMRAHLTRLGVAFRPHLKTAKSLDVARI 67 >gi|46117817|ref|XP_384835.1| hypothetical protein FG04659.1 [Gibberella zeae PH-1] Length = 366 Score = 40.6 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 24/81 (29%), Gaps = 5/81 (6%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 SL+ L TP +E N + + LK + + K L Sbjct: 7 GDSLDDL----DTPSMIVDLDVMEANIKKLMDRLLPTGRNIRPHLKTTKSAIIAKKLVAA 62 Query: 75 GS-GLDIVSEGELRRALAAPV 94 G+ G + E AA Sbjct: 63 GAKGGCVAKLSEAEAITAAGF 83 >gi|33591667|ref|NP_879311.1| low-specificity D-threonine aldolase [Bordetella pertussis Tohama I] gi|33571310|emb|CAE44783.1| low-specificity D-threonine aldolase [Bordetella pertussis Tohama I] gi|332381101|gb|AEE65948.1| low-specificity D-threonine aldolase [Bordetella pertussis CS] Length = 379 Score = 40.6 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 1/62 (1%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSE 83 V TP A E+N + + + + KA+ V LG+ G+ Sbjct: 22 VDTPSLALDLAAFERNLRVMQDWAERLGVALRPHAKAHKCPEVALRQLALGARGICCQKV 81 Query: 84 GE 85 E Sbjct: 82 SE 83 >gi|310815136|ref|YP_003963100.1| alanine racemase domain protein [Ketogulonicigenium vulgare Y25] gi|308753871|gb|ADO41800.1| alanine racemase domain protein [Ketogulonicigenium vulgare Y25] Length = 373 Score = 40.6 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 18/73 (24%), Gaps = 2/73 (2%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLD 79 A +V TP + N M + K + + + G G+ Sbjct: 19 AAMVDTPALVIDLDVFDANIARMKAYAAQMGVALRPHAKTHKSADIALLQMQQGGAVGVC 78 Query: 80 IVSEGELRRALAA 92 E A Sbjct: 79 CQKVSEAVALADA 91 >gi|225012399|ref|ZP_03702835.1| alanine racemase [Flavobacteria bacterium MS024-2A] gi|225003376|gb|EEG41350.1| alanine racemase [Flavobacteria bacterium MS024-2A] Length = 362 Score = 40.6 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 84/342 (24%), Gaps = 23/342 (6%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKAN----SNQAVIKTLAHLGSGLDIVSEGELR 87 S + I+ NY + T + +KAN S+ L LG V+ E Sbjct: 6 LSLSNIDHNYNCIREQINAT-TQIIGVVKANAYGSSSIHFASRLVELGVDYLAVAYTE-- 62 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 E G I + Q +++ E N+ + KK + Sbjct: 63 ---------EGQQLRSQGVKIPIMVFYPQLDALDTLLDACLEPCLYNETILEGFKKILLE 113 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 +++ + + + + L V Sbjct: 114 KKISH-YPVHIKYNTGLNRLGFTPDQSDWVLEQMKNNCFQLESVYSHLAASEAKRPSALC 172 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 +S + F++L+ + + ++ G H + + Sbjct: 173 KSQIELFEILKIKHSSVSNQPPKFHLLNSSGVFNYPEHQYDMVRCGIALHGFANHPDWDA 232 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 K I + + + + + + V Sbjct: 233 HLKPICVLESSITQIHQVKKGNFVGYDHGWQAPQNTQIATLPLGHADGIGRHFGHHKGSV 292 Query: 328 NPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIE 369 G + IVG +C D + ++ GD + Sbjct: 293 MINGKKAP----IVGNVC--MDLLMVDVTSIDCEEGDKVKFF 328 >gi|149178497|ref|ZP_01857086.1| alanine racemase-like protein [Planctomyces maris DSM 8797] gi|148842710|gb|EDL57084.1| alanine racemase-like protein [Planctomyces maris DSM 8797] Length = 366 Score = 40.6 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 65/222 (29%), Gaps = 5/222 (2%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEGEL 86 TP C +E N S+ K + A+ LA +G+G V+ ++ Sbjct: 15 TPILCIDLDIMEANIQKMSDYILSRGKTWRPHEKCHKTPAIA--LAQMGAGAIGVTCAKV 72 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A + + + S + + + A + Sbjct: 73 SEAEVMAAAGVKDILIANMIVGKTKWERVVSLCRHARPIIACDHYAQIEPLAKMCADAGV 132 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 R+ P++N ++ S ++ A + G + I Q ++ Sbjct: 133 VCRMMPEVNIGLNRVGSRPGQDTLDLAMAIDKLEGVELAGIMGY---EGHLLQIQDQAEK 189 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 E +A + L + + G + + GG S+ Sbjct: 190 EEKIIEAMRTLVGCKTTIEAKGIPCEIVSAGGTGSYQITSNC 231 >gi|297172025|gb|ADI23009.1| predicted amino acid aldolase or racemase [uncultured Planctomycetales bacterium HF0500_40D21] gi|297183364|gb|ADI19499.1| predicted amino acid aldolase or racemase [uncultured Planctomycetales bacterium HF0500_40D21] Length = 367 Score = 40.6 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 20/64 (31%), Gaps = 3/64 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI--VSE 83 TP C +E N ++ K + + G+ G+ VSE Sbjct: 16 TPSLCIDLDVMEANISRMASFMAERGKQWRPHEKCHKTPEIAHRQRAAGAIGVTCAKVSE 75 Query: 84 GELR 87 E+ Sbjct: 76 AEVM 79 >gi|119900432|ref|XP_606509.3| PREDICTED: proprotein convertase subtilisin/kexin type 5 [Bos taurus] Length = 1884 Score = 40.6 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 17/249 (6%), Positives = 47/249 (18%), Gaps = 3/249 (1%) Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S E+ +R +F + E S + Sbjct: 1261 DCASCSEVNLCQKCQTRPDRPLFL--HQGRCSTRCPEGFYADNDTCEHCSSSCRTCEGNA 1318 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + ++ + T + + P ++ + + Sbjct: 1319 TNCQSCERGLVLDQGVCRETCPERHVAMEGVCKRCPEMCQDCIHEKTCKECMPEFF-LHK 1377 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 Q + + L +G D+ + + + Sbjct: 1378 DACHQSCPSHFYADGRHCVSCHEDCLECSGPWADDCDLCAEASLVLYDGQCLDECPEGTY 1437 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 L + C+ A ++ D Sbjct: 1438 LEKETKVCKDCQKSCRTCSSSGACTTCQEGLRVNNHGGCVPHTECAAREYWDKEAQACEA 1497 Query: 319 AYHEINYIV 327 + + + Sbjct: 1498 CHAKCLHCT 1506 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 18/270 (6%), Positives = 47/270 (17%), Gaps = 6/270 (2%) Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L E K + + ++ + E +N + Sbjct: 1423 LYDGQCLDECPEGTYLEKETKVCKDCQKSCRTCSSSGACTTCQEGLRVNNHGGCVPHTEC 1482 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 A D A + L + + + Sbjct: 1483 AAREYW-DKEAQACEACHAKCLHCTGPSEFQCQTCLRDSLLLNTTCMQDCPEGYYADEDS 1541 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + + ++ +G + S Sbjct: 1542 HRCAPCHSSCRTCEGRHSMQCLSCQPGWFQLGQECLTQCREGYYAE-----NSTGQCRRC 1596 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + CK P + S + + + + + Sbjct: 1597 HRSCKACQGPQPTDCLSCDPFFFLLRSKGQCHRTCPEHYYMEPSTQTCERCHPTCDKCKG 1656 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNR 355 + G +C + + R Sbjct: 1657 KGALNCLSCVWSYHLAGGLCTSDCLVGEYR 1686 >gi|297477896|ref|XP_002689712.1| PREDICTED: proprotein convertase subtilisin/kexin type 5 [Bos taurus] gi|296484742|gb|DAA26857.1| proprotein convertase subtilisin/kexin type 5 [Bos taurus] Length = 1686 Score = 40.6 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 17/249 (6%), Positives = 47/249 (18%), Gaps = 3/249 (1%) Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 D S E+ +R +F + E S + Sbjct: 1063 DCASCSEVNLCQKCQTRPDRPLFL--HQGRCSTRCPEGFYADNDTCEHCSSSCRTCEGNA 1120 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + ++ + T + + P ++ + + Sbjct: 1121 TNCQSCERGLVLDQGVCRETCPERHVAMEGVCKRCPEMCQDCIHEKTCKECMPEFF-LHK 1179 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 Q + + L +G D+ + + + Sbjct: 1180 DACHQSCPSHFYADGRHCVSCHEDCLECSGPWADDCDLCAEASLVLYDGQCLDECPEGTY 1239 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 L + C+ A ++ D Sbjct: 1240 LEKETKVCKDCQKSCRTCSSSGACTTCQEGLRVNNHGGCVPHTECAAREYWDKEAQACEA 1299 Query: 319 AYHEINYIV 327 + + + Sbjct: 1300 CHAKCLHCT 1308 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 18/270 (6%), Positives = 47/270 (17%), Gaps = 6/270 (2%) Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L E K + + ++ + E +N + Sbjct: 1225 LYDGQCLDECPEGTYLEKETKVCKDCQKSCRTCSSSGACTTCQEGLRVNNHGGCVPHTEC 1284 Query: 146 IAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 A D A + L + + + Sbjct: 1285 AAREYW-DKEAQACEACHAKCLHCTGPSEFQCQTCLRDSLLLNTTCMQDCPEGYYADEDS 1343 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 + + + ++ +G + S Sbjct: 1344 HRCAPCHSSCRTCEGRHSMQCLSCQPGWFQLGQECLTQCREGYYAE-----NSTGQCRRC 1398 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY 325 + CK P + S + + + + + Sbjct: 1399 HRSCKACQGPQPTDCLSCDPFFFLLRSKGQCHRTCPEHYYMEPSTQTCERCHPTCDKCKG 1458 Query: 326 IVNPAGDRLHIHADIVGPICETGDFIALNR 355 + G +C + + R Sbjct: 1459 KGALNCLSCVWSYHLAGGLCTSDCLVGEYR 1488 >gi|190576182|ref|YP_001974027.1| arginine decarboxylase [Stenotrophomonas maltophilia K279a] gi|190014104|emb|CAQ47743.1| putative biosynthetic arginine decarboxylase [Stenotrophomonas maltophilia K279a] Length = 629 Score = 40.6 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 104/320 (32%), Gaps = 29/320 (9%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAH---LGS 76 P + + AF Y +K N + V TLA G Sbjct: 60 PLLVRFPDILGQRLGKLQAAFAQAQQDWEYSGGYTAVYPIKVNQTRGVAGTLASHHGEGF 119 Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GL+ S+ EL L A ++ K + I LAL E + + Sbjct: 120 GLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELKL 178 Query: 137 AVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK- 192 + K + + K ++G + KFG+ Q+ L+ Sbjct: 179 VLEESKALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQLLDLWKSLRDTEYADC 238 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + H+GSQI + + +L G I H+DVGGGLG+ Y Sbjct: 239 LNLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKITHVDVGGGLGVDYEGTRSRSF 298 Query: 253 S------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299 YAS I + FG +I+ E GR + A +L+ V ++++ + Sbjct: 299 CSINYGLHSYASNIVQPLANACEEFGLTPPRIVTECGRAMTAHHAVLIANVSEVEEAQEG 358 Query: 300 TFVILDVAMNDFMRPTLYDA 319 +R Sbjct: 359 RVPDQHDDEPAAIRHLREIH 378 >gi|159122207|gb|EDP47329.1| conserved hypothetical protein [Aspergillus fumigatus A1163] Length = 394 Score = 40.6 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 8/89 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F L TP S +E+N ++ +K Sbjct: 1 MD-FSLQNHRSFI-GRPATDL----PTPAVVLSKPILERNIKQLLQDVKDLEISFRPHVK 54 Query: 61 ANSNQAVIKTLAHLGSG--LDIVSEGELR 87 + V + + G+ + + E+R Sbjct: 55 TLKSIEVTRMMLGNGTHRRIVASTLCEIR 83 >gi|146323639|ref|XP_001481544.1| conserved hypothetical protein [Aspergillus fumigatus Af293] gi|129555319|gb|EBA27190.1| conserved hypothetical protein [Aspergillus fumigatus Af293] Length = 394 Score = 40.6 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 8/89 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M F L TP S +E+N ++ +K Sbjct: 1 MD-FSLQNHRSFI-GRPATDL----PTPAVVLSKPILERNIKQLLQDVKDLEISFRPHVK 54 Query: 61 ANSNQAVIKTLAHLGSG--LDIVSEGELR 87 + V + + G+ + + E+R Sbjct: 55 TLKSIEVTRMMLGNGTHRRIVASTLCEIR 83 >gi|223984016|ref|ZP_03634173.1| hypothetical protein HOLDEFILI_01463 [Holdemania filiformis DSM 12042] gi|223964001|gb|EEF68356.1| hypothetical protein HOLDEFILI_01463 [Holdemania filiformis DSM 12042] Length = 389 Score = 40.6 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 17/53 (32%), Gaps = 1/53 (1%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLGSGLDIV 81 Y I +N N + + + LK N V + L LG + Sbjct: 31 YLLDLDTITENGKRMLNVARQNEVKLFFMLKQLGRNPVVARRLMELGFAGCVA 83 >gi|300787914|ref|YP_003768205.1| D-amino acid deaminase [Amycolatopsis mediterranei U32] gi|299797428|gb|ADJ47803.1| D-amino acid deaminase [Amycolatopsis mediterranei U32] Length = 432 Score = 40.6 bits (93), Expect = 0.55, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 20/64 (31%), Gaps = 1/64 (1%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGEL 86 PF A+E N T + ++ K + G+ G+ + G L Sbjct: 53 PFVVLDEEALEHNLRTMAAWCAARGVVLAPHGKTTMAPQLFARQIEHGAWGVTCANAGHL 112 Query: 87 RRAL 90 R Sbjct: 113 RIYR 116 >gi|330948109|gb|EGH48369.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 51 Score = 40.6 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 7/55 (12%) Query: 353 LNRKIALPRPGDLLYIEKTGAYGA--VQSGTYNSRLLIPEIMVNGSQFHIIRPRM 405 + + GDLL + GAYG + + + V + R R Sbjct: 2 RRQPLKGVNIGDLLVLPLAGAYGYNISHA-DFLCHPRPSQHFVRNGE----RVRQ 51 >gi|290978854|ref|XP_002672150.1| predicted protein [Naegleria gruberi] gi|284085724|gb|EFC39406.1| predicted protein [Naegleria gruberi] Length = 5468 Score = 40.6 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 24/286 (8%), Positives = 51/286 (17%), Gaps = 12/286 (4%) Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S G ++ + I+ S + E ++ Sbjct: 2646 CTSRGNCSDFNICECKSDFYGPVCEFYDCNGIEHLNSSVCSTHGKCTSYEKCECDEGYFG 2705 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 + +N+ + + S Sbjct: 2706 NDCQFF-TCNYVNHTESNSCSARGECSSYNNCTCFTNYWGVDCQLTSCGNVQSNETTVCS 2764 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNG--HNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 Q + + N H + G G Y + Sbjct: 2765 SRGQCIDFNNCSCDEGYYGPTCEFYTCNNVEHLNNSVCSGRGKCSEYSNCTCDTGYYGVN 2824 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + + GR + A + T + N+ + Sbjct: 2825 CEFYTCLEGNNTDPSVCSGRGVCASYNNCSCRPHYFGNDCALTTCGNVRSNNNSVCSRRG 2884 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPG 363 N G C+ D ++R + G Sbjct: 2885 QCIDYNNCSCVD---------TYYGSTCQEYDCFGVSRNVKSVCSG 2921 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/273 (5%), Positives = 41/273 (15%), Gaps = 20/273 (7%) Query: 80 IVSEGELRRALAAPVPAE-----RIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 S GE + + + + G + Sbjct: 2295 CSSRGECSSFNNCSCRDNYFGDTCELTTCGTVNSNNPYVCSGKGKCIDYNTCVCKYGYFG 2354 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTG-KKEDKFGIPIHQIHSLYAYASTLPGVKI 193 +E+ + ++ Sbjct: 2355 DICEHYSCFNITEGEPLVCSGRGNCTNFGDCKCRENYMDLACDVTSCHGVLSNDTNVCSG 2414 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 G S + + + ++ H + Sbjct: 2415 KGQCADFDSCACDEGYYGDNCEYFNCNGIEHLNSSVCSTHGKCTSYEKCECDEGYFGNDC 2474 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + + C E + + Sbjct: 2475 QFFTCNSVNHTESTVCSSRGECSSYNNCSCRDNYFGSTCELTTCGSVQSNNSKVCTSRGN 2534 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + ++ +D GP+CE Sbjct: 2535 CSDFNICEC--------------KSDFYGPVCE 2553 >gi|255953449|ref|XP_002567477.1| Pc21g04310 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589188|emb|CAP95328.1| Pc21g04310 [Penicillium chrysogenum Wisconsin 54-1255] Length = 410 Score = 40.6 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 13/103 (12%), Positives = 29/103 (28%), Gaps = 8/103 (7%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M + + + + +L TP S +E+N + +K Sbjct: 1 MDH-SLQDHASYI-GRPVSEL----PTPALILSKPVLERNTQILLEDVKQLGIEFRPHIK 54 Query: 61 ANSNQAVIKTLAHLGSG--LDIVSEGELRRALAAPVPAERIVF 101 V + + G + + E+R +L + Sbjct: 55 TLKCTEVTRMMLGDGLHRRIVASTLAEIRGSLDLVKEGKIDEC 97 >gi|33599435|ref|NP_886995.1| putative metal-activated pyridoxal enzyme [Bordetella bronchiseptica RB50] gi|33567031|emb|CAE30944.1| putative metal-activated pyridoxal enzyme [Bordetella bronchiseptica RB50] Length = 381 Score = 40.6 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 16/196 (8%), Positives = 50/196 (25%), Gaps = 2/196 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 + TP ++ N + +G+ + +K + V G+ G+ + Sbjct: 10 DTLDTPAAIVDVARMQHNIARMQDRMNGLGVSLRPHVKTSKCTPVALAQLAAGARGVTVS 69 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT-LNQRAVSL 140 + E + AA + + + G + +E + + Sbjct: 70 TLKEAEQFFAAGIADILYAVGMAEHRLPAALALRRRGCDLKIITDNAESARTIADFGRAH 129 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 + + ++ D + + K + + + + Sbjct: 130 DEVFEVWIEIDTDGHRSGIKPEEAALLAVGAALHEGGMRLGGVMTHAGSSYDLDTPEALA 189 Query: 201 GSQIDQIESFHKAFKL 216 + +A + Sbjct: 190 AMAEQERAGCVRAAER 205 >gi|227818936|ref|YP_002822907.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234] gi|227337935|gb|ACP22154.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234] Length = 392 Score = 40.6 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 5/77 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SLE L +TP +++N + D M + LK + V + + Sbjct: 17 SLEDL----ETPCLVLHADRMDRNVQRLRSRLDAMGVSLRPHLKTAKSIEVARRVMSSPE 72 Query: 77 G-LDIVSEGELRRALAA 92 G + + E + AA Sbjct: 73 GPATVSTLKEAEQFAAA 89 >gi|149189534|ref|ZP_01867818.1| hypothetical protein VSAK1_00892 [Vibrio shilonii AK1] gi|148836691|gb|EDL53644.1| hypothetical protein VSAK1_00892 [Vibrio shilonii AK1] Length = 379 Score = 40.6 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 37/128 (28%), Gaps = 2/128 (1%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLG-SGLDIVSEGELR 87 Y N + + K N + + L LG G+ V E R Sbjct: 31 YVIDVEQFTANAKVIRQRASDLGLKLYGMTKQFGRNPYLAQLLLELGYDGIVAVDFKEAR 90 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A V + + T + + V S + + ++ A G+ P+ Sbjct: 91 ALHLAGVKVQHVGHLVQPPTAMVEQIVAEMKPEVMTVYSLDKARQISDAACKCGRVQPVL 150 Query: 148 FRVNPDIN 155 + D + Sbjct: 151 VKFYGDED 158 >gi|126737976|ref|ZP_01753706.1| hypothetical protein RSK20926_20082 [Roseobacter sp. SK209-2-6] gi|126721369|gb|EBA18073.1| hypothetical protein RSK20926_20082 [Roseobacter sp. SK209-2-6] Length = 382 Score = 40.6 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 22/71 (30%), Gaps = 1/71 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIV 81 + TP + +N + + LK + + + + G+G + Sbjct: 9 EHLPTPSLVVDEAKMRRNIKRQEKRVQALGVTLRPHLKTVKSVDIARQMLTGGTGPATVS 68 Query: 82 SEGELRRALAA 92 + E AA Sbjct: 69 TLEEAEIFAAA 79 >gi|163858331|ref|YP_001632629.1| hypothetical protein Bpet4013 [Bordetella petrii DSM 12804] gi|163262059|emb|CAP44361.1| conserved hypothetical protein [Bordetella petrii] Length = 379 Score = 40.2 bits (92), Expect = 0.59, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 5/77 (6%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 SL+ L TP ++ N + + + +K + V + G+ Sbjct: 7 SLQDL----DTPAAIIDVARMQANIDRMQQRMNTLGVALRPHVKTSKCTPVAQAQLAAGA 62 Query: 77 -GLDIVSEGELRRALAA 92 G+ + + E + A Sbjct: 63 RGITVSTLKEAEQFFEA 79 >gi|85706729|ref|ZP_01037821.1| threonine aldolase, low-specificity [Roseovarius sp. 217] gi|85668787|gb|EAQ23656.1| threonine aldolase, low-specificity [Roseovarius sp. 217] Length = 387 Score = 40.2 bits (92), Expect = 0.59, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 8/76 (10%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 + + QTP A+E+N + K + + V L Sbjct: 21 GMDESDI----QTPCLVLDLDALERNIKKMGDWARDHGMRHRVHGKMHKSVDVALLQESL 76 Query: 75 G--SGLDI--VSEGEL 86 G G+ VSE E+ Sbjct: 77 GGACGVCCQKVSEAEV 92 >gi|301112995|ref|XP_002998268.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262112562|gb|EEY70614.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 678 Score = 40.2 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 20/68 (29%), Gaps = 3/68 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMD-TMVCYALKANSNQAV--IKTLAHLGSGLDIVSE 83 TP A+E N + + KA+ + A+ ++ GL Sbjct: 51 TPCLLVDLDALEINLKRLPESLKASPKIAIRPHAKAHKSSALGQLQLQLSHAVGLCCQKV 110 Query: 84 GELRRALA 91 GE Sbjct: 111 GEAEAMFH 118 >gi|222109718|ref|YP_002551982.1| alanine racemase domain-containing protein [Acidovorax ebreus TPSY] gi|221729162|gb|ACM31982.1| alanine racemase domain protein [Acidovorax ebreus TPSY] Length = 393 Score = 40.2 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 19/62 (30%), Gaps = 3/62 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDI---VSE 83 TP A+E+N + K + + + L G+ VSE Sbjct: 25 TPALVVDLDAMERNIQRMAEFAHKHQVRWRPHAKMHKSAEIALQLEKAGARGHCVQKVSE 84 Query: 84 GE 85 E Sbjct: 85 AE 86 >gi|15891036|ref|NP_356708.1| hypothetical protein Atu3927 [Agrobacterium tumefaciens str. C58] gi|15159365|gb|AAK89493.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 362 Score = 40.2 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 3/63 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI--VSE 83 TP + N L + D +K + A+ K G+ G++ VSE Sbjct: 17 TPMPVIDEDRLAANILRAQSYLDAHGKTFRPHIKTHKIPAIAKQQLQAGAIGINCQKVSE 76 Query: 84 GEL 86 E+ Sbjct: 77 AEV 79 >gi|260061620|ref|YP_003194700.1| D-threonine aldolase, metal-activated pyridoxal enzyme [Robiginitalea biformata HTCC2501] gi|88785752|gb|EAR16921.1| D-threonine aldolase, metal-activated pyridoxal enzyme [Robiginitalea biformata HTCC2501] Length = 377 Score = 40.2 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 21/69 (30%), Gaps = 6/69 (8%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLD-- 79 A V +P I +N G + +K + +I+ G G+D Sbjct: 19 AREVPSPALLVYPERIRRNIDAMIR-IAGSPDRLRPHIKTHKTAEIIQM--QRGRGIDRF 75 Query: 80 -IVSEGELR 87 + E Sbjct: 76 KCATIAEAE 84 >gi|296222256|ref|XP_002757120.1| PREDICTED: laminin subunit alpha-1 [Callithrix jacchus] Length = 3161 Score = 40.2 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 60/309 (19%), Gaps = 23/309 (7%) Query: 61 ANSNQAVIKTLAHLGSGLDIVSEG--ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG 118 AN N A I LD+ S +L A ++G G Sbjct: 758 ANYNSAKIALYRLESVSLDVASPNAIDLAVAAEVEHCECPQGYTGTSCESCLSGYYRVDG 817 Query: 119 IYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHK-KISTGKKEDKFGIPIHQ 177 I + E G A D + Sbjct: 818 ILFGGICQPCECHHHAAECDVHGVCIACAHNTTGDHCERCLPGFYGEPSRGTPGDCQPCA 877 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 A + P ++ D + Q S + + G + D Sbjct: 878 CPLTMATNNFSPTCHLNDGDEVVCDQCAPGYSGAWCERCADGYYGNPTAPGKSCVPCDCS 937 Query: 238 GGLGIAYHSDHR--------PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTK 289 G + ++D A G + + R + Sbjct: 938 GNVDPKEAGHCDSVTGECLKCLGNTDGAHCERCADGFFGDAVTAKNCRACECHEKGSHSA 997 Query: 290 VISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD---------- 339 V ++ + D Y + D Sbjct: 998 VCHLETGLCDCKPNVTGQQCDQCLRGYYGLDSGHGCQPCNCSTAGSVSDDCTDEGQCHCI 1057 Query: 340 --IVGPICE 346 + G C+ Sbjct: 1058 PGVAGKRCD 1066 >gi|149920522|ref|ZP_01908990.1| arginine decarboxylase [Plesiocystis pacifica SIR-1] gi|149818703|gb|EDM78148.1| arginine decarboxylase [Plesiocystis pacifica SIR-1] Length = 676 Score = 40.2 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 14/93 (15%) Query: 330 AGDRLHIHADIVGPICET-GDF--IALN----RKIAL---PRPGD---LLYIEKTGAYGA 376 G +A+IV C++ G A + + L P D L TGAY Sbjct: 522 HGSAPAYNAEIVDITCDSDGCVRTFAHPDDNLKSLPLHAPPARNDEPYFLGFFMTGAYQD 581 Query: 377 VQSGTYNSRLLIPEIMVNG-SQFHIIRPRMTFQ 408 + +N E++V G + +I + + Sbjct: 582 SLANAHNLFGRCHEVIVRGPEEDGVILGAQSIE 614 >gi|55251259|emb|CAH69088.1| jagged2 [Danio rerio] Length = 1216 Score = 40.2 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 15/259 (5%), Positives = 38/259 (14%), Gaps = 16/259 (6%) Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + G ++ A+ + + + Sbjct: 209 YFGHYRCDPSGNIVCLDGWMGEDCRTAICKQGCNLIHGGCAVPGEC-KCNYGWQGQFCDE 267 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 P T E +G + + Sbjct: 268 CLPYPGCLHGTCVMPWQCTCEKNWGG-----LLCDKDLNYCGTHHPCVNGGTCMNSEPDE 322 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + + + + G + + P + + Sbjct: 323 YNCACPEGYSGKNCEIAEHACVSNPCANGGTCHEVPTGFECHCPPGWEGPTCAKDMDECA 382 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + + V + K+ + Sbjct: 383 SSPCAQGGTCIDLENGFECVCPPQWVGKTCQIDLNGCHGQCQNGATCKELVHGGYHCQC- 441 Query: 328 NPAGDRLHIHADIVGPICE 346 A VG CE Sbjct: 442 ---------PAGFVGLHCE 451 >gi|145296605|ref|YP_001139426.1| hypothetical protein cgR_2513 [Corynebacterium glutamicum R] gi|140846525|dbj|BAF55524.1| hypothetical protein [Corynebacterium glutamicum R] Length = 380 Score = 40.2 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 19/69 (27%), Gaps = 1/69 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + N + + +K + + + G+ G+ + GE Sbjct: 42 TPAVLIDRERLTANIFKMAAHAAANGIALRPHVKTHKIIEIAQMQVDAGARGITCATVGE 101 Query: 86 LRRALAAPV 94 A Sbjct: 102 AEIFAGAGF 110 >gi|83747285|ref|ZP_00944327.1| Alanine racemase [Ralstonia solanacearum UW551] gi|207744276|ref|YP_002260668.1| ipr001608 alanine racemase, n-terminal protein [Ralstonia solanacearum IPO1609] gi|83726109|gb|EAP73245.1| Alanine racemase [Ralstonia solanacearum UW551] gi|206595681|emb|CAQ62608.1| ipr001608 alanine racemase, n-terminal protein [Ralstonia solanacearum IPO1609] Length = 376 Score = 40.2 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + N D + +K + V++ G+ G+ + + E Sbjct: 8 TPAALIDVARMTGNIARMQQRLDALGVRFRPHVKTTKCEPVVRAQLAAGAQGITVSTLKE 67 Query: 86 LRRALAA 92 + AA Sbjct: 68 AEQFFAA 74 >gi|313673051|ref|YP_004051162.1| arginine decarboxylase [Calditerrivibrio nitroreducens DSM 19672] gi|312939807|gb|ADR18999.1| arginine decarboxylase [Calditerrivibrio nitroreducens DSM 19672] Length = 615 Score = 40.2 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 97/302 (32%), Gaps = 29/302 (9%) Query: 18 LEKLAHV-VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVI 68 ++ + + P I++ AF + LK N + Sbjct: 35 VKDIRDEGYKGPLLIRFPHLIKEQIDLLFKAFKKSMKEYGYQGGFNALFPLKVNQFPNFV 94 Query: 69 KTLAHL--GS--GLDIVSEGELRRALAAPVPAERIVFS---GVGKTIDEIDLALQSGIYC 121 L + G GL+ S+ EL A+A P I+ + A Sbjct: 95 IPLMEMTKGIPYGLEAGSKPELIIAMAYNNPGSPIMVNGFKDKEMISLGFIAAKMGHDIT 154 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 +E +EL+T+ A +GK P ++ +G KFG+ ++ Sbjct: 155 LTIEGLNELETILTVAKEMGKPYPKIGLRIRLHSSGIGIWAKSGGINSKFGLTSSELIEA 214 Query: 182 YAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 ++ + + HIGSQI +I KA + ++ +L G + GG Sbjct: 215 MNMLKNSNMLEYFTMIHFHIGSQISEISPLKKALREAGNIHAELYKMGAHNLKSIDLGGG 274 Query: 241 GIAYHSDHRPPSSSDYA------------SLIHQYFGNLQCKIILEPGRFLVADVGILVT 288 ++ H S Y I I LE GRF+ A +LV Sbjct: 275 LAVEYAQHDGLSQRHYTLEEYASDVVFLLKTIAHNKHVPDPDIYLEAGRFVAAKHAVLVA 334 Query: 289 KV 290 V Sbjct: 335 PV 336 >gi|281211349|gb|EFA85514.1| hypothetical protein PPL_01471 [Polysphondylium pallidum PN500] Length = 277 Score = 40.2 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 4/52 (7%), Positives = 14/52 (26%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAH 73 + +P + +N + + + +K + + K Sbjct: 6 IKQLPSPSVVVDEEIVRRNCKKMIDRSKQLGVAIRPHMKTHKTIEIGKFQVE 57 >gi|254508082|ref|ZP_05120209.1| arginine decarboxylase [Vibrio parahaemolyticus 16] gi|219549049|gb|EED26047.1| arginine decarboxylase [Vibrio parahaemolyticus 16] Length = 636 Score = 40.2 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 64/321 (19%), Positives = 110/321 (34%), Gaps = 37/321 (11%) Query: 14 ENVSLEKLA-----HVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALK 60 + L + + P + + +AF+ + ++ Y +K Sbjct: 42 HQIPLSNIVSKLEEQQLNLPVLVRFPQILHQRVHGICDAFNQAIDEYQYTNNYLLVYPIK 101 Query: 61 ANSNQAVIKTLAH-------LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDL 113 N + V+ + GL+ S+ EL LA A ++ K + + L Sbjct: 102 VNQQKEVVDEILESQAQLETKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYVRL 161 Query: 114 ALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDK 170 AL V E + + K + R+ I + K S+G ++ K Sbjct: 162 ALIGEKLGHKVFIVLEKLSELDLVLKEAKSLGVKPRMGIRIRLASQGAGKWQSSGGEKSK 221 Query: 171 FGIPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGH 229 FG+ Q+ ++ + + V H+GSQ+ I +LR G Sbjct: 222 FGLAASQVLTVIDRLREEDQLDALQLVHFHLGSQMANIRDIRNGVNESARFYCELRGMGA 281 Query: 230 NIQHIDVGGGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILEPG 276 +IQ D+GGGL + Y +YA I Q + + II E G Sbjct: 282 DIQFFDIGGGLAVDYDGTRSQSSNSMNYGLIEYARNIVSTVGDVCQQYEQPEPVIISESG 341 Query: 277 RFLVADVGILVTKVISIKKSA 297 R L A +L+T VI + Sbjct: 342 RSLTAHHAVLITNVIGTEAYH 362 >gi|209519839|ref|ZP_03268623.1| alanine racemase domain protein [Burkholderia sp. H160] gi|209499715|gb|EDZ99786.1| alanine racemase domain protein [Burkholderia sp. H160] Length = 378 Score = 40.2 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 24/74 (32%), Gaps = 1/74 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 ++TP ++ N + + +K V++ G+ G+ + Sbjct: 4 EQIETPAALIDVARMQINIARMQGRMNALGVAFRPHVKTTKCIEVVRAQIAAGARGITVS 63 Query: 82 SEGELRRALAAPVP 95 + E AA + Sbjct: 64 TLKEAEAFFAAGID 77 >gi|320328125|gb|EFW84130.1| alanine racemase domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 378 Score = 40.2 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 1/73 (1%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT-LAHLGSG 77 L + TP +++N + + + + +K + VI+ +A SG Sbjct: 2 SALLSSLDTPVALLDVPRMQRNIQRMQHRINELGVRLRPHVKTSKCLPVIQAQIAADASG 61 Query: 78 LDIVSEGELRRAL 90 + + + E Sbjct: 62 VTVSTLKEAEHCF 74 >gi|121610311|ref|YP_998118.1| alanine racemase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121554951|gb|ABM59100.1| D-3-hydroxyaspartate aldolase [Verminephrobacter eiseniae EF01-2] Length = 372 Score = 40.2 bits (92), Expect = 0.65, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 21/72 (29%), Gaps = 1/72 (1%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 + + TP A E+N + D + K + A+ +G+ Sbjct: 7 RIGDAVTEIDTPALIVDLDAFERNMKKMAAFADLAGIRLRPHAKTHRCAAIALKQIQMGA 66 Query: 77 -GLDIVSEGELR 87 G GE Sbjct: 67 VGQCCQKVGEAE 78 >gi|169608606|ref|XP_001797722.1| hypothetical protein SNOG_07385 [Phaeosphaeria nodorum SN15] gi|160701681|gb|EAT84851.2| hypothetical protein SNOG_07385 [Phaeosphaeria nodorum SN15] Length = 708 Score = 40.2 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 7/77 (9%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 SL+ L TP +E N + LK + + + L Sbjct: 346 GDSLDSL----DTPSMIVDLDLMEANIKKLMERLLPTGVNIRPHLKTTKSALLAQRLVDA 401 Query: 75 GSGLDIV---SEGELRR 88 G+ V SE E+ Sbjct: 402 GAKGGCVAKLSEAEVMC 418 >gi|15799278|gb|AAL08215.1|AF229450_1 jagged2 [Danio rerio] Length = 1216 Score = 40.2 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 15/259 (5%), Positives = 38/259 (14%), Gaps = 16/259 (6%) Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + G ++ A+ + + + Sbjct: 209 YFGHYRCDPSGNIVCLDGWMGEDCRTAICKQGCNLIHGGCAVPGEC-KCNYGWQGQFCDE 267 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 P T E +G + + Sbjct: 268 CLPYPGCLHGTCVMPWQCTCEKNWGG-----LLCDKDLNYCGTHHPCVNGGTCMNSEPDE 322 Query: 208 ESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNL 267 + + + + G + + P + + Sbjct: 323 YNCACPEGYSGKNCEIAEHACVSNPCANGGTCHEVPTGFECHCPPGWEGPTCAKDMDECA 382 Query: 268 QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIV 327 + + V + K+ + Sbjct: 383 SSPCAQGGTCIDLENGFECVCPPQWVGKTCQIDLNGCHGQCQNGATCKELVHGGYHCQC- 441 Query: 328 NPAGDRLHIHADIVGPICE 346 A VG CE Sbjct: 442 ---------PAGFVGLHCE 451 >gi|255021517|ref|ZP_05293561.1| Biosynthetic arginine decarboxylase [Acidithiobacillus caldus ATCC 51756] gi|209574084|gb|ACI62980.1| arginine decarboxylase SpeA [Acidithiobacillus caldus] gi|254969045|gb|EET26563.1| Biosynthetic arginine decarboxylase [Acidithiobacillus caldus ATCC 51756] Length = 629 Score = 40.2 bits (92), Expect = 0.68, Method: Composition-based stats. Identities = 76/339 (22%), Positives = 125/339 (36%), Gaps = 38/339 (11%) Query: 13 AENVSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAFDG--------MDTMVCYAL 59 A V L + + P + + + +AF Y + Sbjct: 41 ARGVRLSDVVAALGEQGLALPCLLRFPQILAQRVQSLQSAFAAAMAAWNYPAPYTAVYPI 100 Query: 60 KANSNQAVIKTLAHLGS---GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQ 116 K N ++ V++++ G GL+ S+ EL LA E+ G E Sbjct: 101 KVNQHRRVVESILQAGDGGVGLEAGSKPELLTVLALS--PEKATIVCNGYKDAEYIRLAL 158 Query: 117 SGIY-----CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF 171 G VE SEL + A L + I R +A K +TG ++ KF Sbjct: 159 MGERLGRRVFLVVEKSSELPLILGIARELQVQPRIGVRARLA-SAGAGKWQNTGGEKSKF 217 Query: 172 GIPIHQIHSLYAYASTLPG-VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 G+ H+I L + + H+GSQI I+ + L Q+LR G + Sbjct: 218 GLSSHEILQLLEDLRAADALQNLQLLHFHLGSQIPNIQHIQGGMRECARLYQELRHQGAD 277 Query: 231 IQHIDVGGGLGIAYHSDHRPPSS------SDYASLI-------HQYFGNLQCKIILEPGR 277 I+ +DVGGGLG+ Y H SDYA + Q +I+ E GR Sbjct: 278 IRVVDVGGGLGVDYEGTHSRAYCSVNYRVSDYAQSVVGILAELCQREHLPYPEIVSESGR 337 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 L A +L++ +I ++++ + +L+ + Sbjct: 338 ALTAHHAVLISNIIDVERAPGEQRPVLEGSSPALGAWQR 376 >gi|285017180|ref|YP_003374891.1| arginine decarboxylase [Xanthomonas albilineans GPE PC73] gi|283472398|emb|CBA14903.1| probable arginine decarboxylase protein [Xanthomonas albilineans] Length = 629 Score = 40.2 bits (92), Expect = 0.68, Method: Composition-based stats. Identities = 64/333 (19%), Positives = 107/333 (32%), Gaps = 31/333 (9%) Query: 17 SLEKLAHVVQT--PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQA 66 + A P + + AF Y +K N ++ Sbjct: 47 DVVDAARAAGAKLPMLVRFPDILGERLGKLQAAFAQAQADWDYVGGYTAVYPIKVNQHRG 106 Query: 67 VIKTLAH---LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN 123 V TLA G GL+ S+ EL L A ++ K + I LAL Sbjct: 107 VAGTLASHQGEGFGLEAGSKPELMAVL-ALSRPGGLIVCNGYKDREYIRLALIGRKLGLQ 165 Query: 124 VESESELKTLNQRAVSLGKKAPIAFR---VNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 E + + + + + + K ++G + KFG+ Q+ Sbjct: 166 TFIVIEKPSELKLVLDEARVLDVRPGLGVRMRLASLGAGKWQNSGGDKAKFGLAPRQLLD 225 Query: 181 LYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239 L+ ++ + H+GSQI + + +L G I H+DVGGG Sbjct: 226 LWKTLRDTEYADALNLLHFHMGSQISNVRDIANGMREATRYFVELSKLGAKISHVDVGGG 285 Query: 240 LGIAYHSDHRPPSS------SDYASLI-------HQYFGNLQCKIILEPGRFLVADVGIL 286 LGI Y YAS I + G +I+ E GR + A +L Sbjct: 286 LGIDYEGTRSRSECSINYGLHAYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVL 345 Query: 287 VTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 V V ++++ + + +R Sbjct: 346 VANVSEVEQAPEGRVPDVHDDEPAAIRHMREIH 378 >gi|149201464|ref|ZP_01878439.1| alanine racemase-like protein [Roseovarius sp. TM1035] gi|149145797|gb|EDM33823.1| alanine racemase-like protein [Roseovarius sp. TM1035] Length = 387 Score = 40.2 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V LG G+ Sbjct: 25 ADIQTPCLVLDLDALERNIKKMGDWARDHGMRHRVHGKMHKSVDVALLQESLGGACGVCC 84 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 85 QKVSEAEV 92 >gi|254373953|ref|ZP_04989435.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|151571673|gb|EDN37327.1| conserved hypothetical protein [Francisella novicida GA99-3548] Length = 520 Score = 40.2 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 97/300 (32%), Gaps = 37/300 (12%) Query: 13 AENVSLEKLAHV-------VQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCY 57 EN+ + H P Y ++ N+F+ + Y Sbjct: 3 IENIPIVDFLHQANFQGATY--PLVLYFEHILKNKIDKLYNSFEKAISNLGYTGKYSLAY 60 Query: 58 ALKANSNQAVIKTLAHLGSG------LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEI 111 +K N Q +IK + ++ ++ EL L+ ++I+ G Sbjct: 61 PIKVNPEQKIIKAIYDYHQHNQVSLDYEVGTKSELLAVLSTAAKTQKIIC--NGFKDLSF 118 Query: 112 DLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKF 171 Q + + + + I +K F Sbjct: 119 YKIAQLAAKIGYKIIIVIENISEINIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQK---F 175 Query: 172 GIPIHQIHSLYAYAS-TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN 230 G+ + QI+ + K+ + HIGSQ+ + + L + +L+S+ N Sbjct: 176 GLSLSQINECINFLKTNQLQQKLLLLHSHIGSQLKSTDKVVANIQRLMRIYSELKSDFVN 235 Query: 231 IQHIDVGGGLGIAYHSDHRP-PSSSDYA-------SLIHQYFGNLQCKIILEPGRFLVAD 282 +++ID GGGL + Y RP YA +Y+ I+ E GR + A+ Sbjct: 236 LEYIDFGGGLAVNYDEYDRPSYDFDSYAKTIIKNCKYYAEYYNCDMPSIVTESGRAITAE 295 >gi|291402817|ref|XP_002717822.1| PREDICTED: MEGF11 protein-like [Oryctolagus cuniculus] Length = 1044 Score = 40.2 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 27/274 (9%), Positives = 45/274 (16%), Gaps = 6/274 (2%) Query: 79 DIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV 138 E E + V + G C + + Sbjct: 88 CCPGYYENGDFCIPLCTEECVHGRCVSPDTCHCEPGWG-GPDCSSGCDSDHWGSHCSNRC 146 Query: 139 SLGK---KAPIAFRVNPDINANTHKKISTGKKE-DKFGIPIHQIHSLYAYASTLPGVKIS 194 PI + G + A G + Sbjct: 147 QCQNGALCNPITGACVCAAGFRGWRCEELCAPGTHGKGCQLPCQCRNGASCDPRTGECLC 206 Query: 195 GV-DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + + H A LR Q + H G A + PP + Sbjct: 207 APGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGT 266 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMR 313 + + A + + N Sbjct: 267 FGQNCSQDCPCHHGGQCDHVTGQCHCTAGYMGDRCQEECPLGTFGFQCSQRCECHNGGQC 326 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 A P + GP C + Sbjct: 327 SPTTGACECEPGYKGPRCRERLCPEGLHGPGCAS 360 >gi|255530336|ref|YP_003090708.1| alanine racemase domain-containing protein [Pedobacter heparinus DSM 2366] gi|255343320|gb|ACU02646.1| alanine racemase domain protein [Pedobacter heparinus DSM 2366] Length = 375 Score = 40.2 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 18/70 (25%), Gaps = 2/70 (2%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIV 81 + TP ++ N + + +K + + V + L G Sbjct: 17 DQLDTPALVVYLDRVKTNIQHAIDIIAD-PARLRPHVKTHKTKEVSRLLMDAGVNKFKCA 75 Query: 82 SEGELRRALA 91 + E Sbjct: 76 TIAEAEMLGM 85 >gi|257469535|ref|ZP_05633627.1| Serine racemase [Fusobacterium ulcerans ATCC 49185] gi|317063779|ref|ZP_07928264.1| serine racemase [Fusobacterium ulcerans ATCC 49185] gi|313689455|gb|EFS26290.1| serine racemase [Fusobacterium ulcerans ATCC 49185] Length = 369 Score = 39.8 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 1/69 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 ++TP + A+E N T+ D + +K + + ++K G+ G Sbjct: 4 ENLKTPAILLNFDALENNIKTYQKMCDDNGKELWPMIKTHKSMELLKLQIEAGATGALCG 63 Query: 82 SEGELRRAL 90 + E Sbjct: 64 TLDEAEACC 72 >gi|47228040|emb|CAF97669.1| unnamed protein product [Tetraodon nigroviridis] Length = 621 Score = 39.8 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 5/45 (11%), Positives = 16/45 (35%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 +P +++N S ++ M + +K + + + Sbjct: 224 SPALVVDLDKVKRNVQKISEHYEKMGVQLRPHMKTHKTLECAEIM 268 >gi|307298343|ref|ZP_07578147.1| alanine racemase domain protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306916429|gb|EFN46812.1| alanine racemase domain protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 410 Score = 39.8 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 1/47 (2%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLGS 76 +E+N + +A G + + K N + +TL ++G Sbjct: 33 VVDLDMVEENAVKILDAAAGRGIHLYFMTKQFGRNPEICRTLNNVGI 79 >gi|291236805|ref|XP_002738328.1| PREDICTED: neurogenic locus notch homolog protein 2-like [Saccoglossus kowalevskii] Length = 1950 Score = 39.8 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 18/279 (6%), Positives = 50/279 (17%), Gaps = 10/279 (3%) Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G D E + + + Y E + + Sbjct: 1233 GYHCDCADGYEGDNCDSDTDE------CQSDPCHNGGTCIDEVNGYQCECADGWEGENCD 1286 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 D + G + + I + S + +++ Sbjct: 1287 YDTDECQSDPCHNGGTCIDEVNGYQCNCADGWEGNNCDSDIDECQSDPCHNGGTCIDEVN 1346 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G + + + + + + + + Sbjct: 1347 GYHCDCEDGWEGDDCDSGYYCSSNPCPNGASCRDITLGYECICLSGYTGSNCETDIDECQ 1406 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + D + I ++ Sbjct: 1407 SDPCHNGGACIDEVNGYHCDCADGWEGDHCDSDIDECQSDPCHNGGTCIDEMDGYHCDCA 1466 Query: 315 TLYDAYHEINYIVNPAGDRLHIHAD----IVGPICETGD 349 Y+ + + I + H + G C+ D Sbjct: 1467 DGYEGDNCNSDIDECQSNPCHNGGTCIDEVNGYHCDCAD 1505 >gi|207092618|ref|ZP_03240405.1| arginine decarboxylase [Helicobacter pylori HPKX_438_AG0C1] Length = 593 Score = 39.8 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 79/263 (30%), Gaps = 24/263 (9%) Query: 17 SLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANS 63 SL ++ + P ++K + +AF + LK N Sbjct: 11 SLLEIVQSVRDKGYRGPLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQ 70 Query: 64 NQA----VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119 + +++ L GL+ S+ EL + + + K + I+L + Sbjct: 71 MPSFVFPLVQGAKGLDYGLEAGSKSEL-IIAMSYTNPKAPITVNGFKDKEMIELGFIAKS 129 Query: 120 YCFNVESESELKTLNQRA-----VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 + E + + P + T +G KFG+ Sbjct: 130 MQHEITLTIEGLNELKTIIAVAKQNDFVACPKIGIRIRLHSTGTGVWAKSGGINSKFGLS 189 Query: 175 IHQIHSLYAYASTLP-GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 ++ + HIGSQI I KA + +L +LR G + Sbjct: 190 STEVLEAMRLLEENDLLEHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLN 249 Query: 234 IDVGGGLGIAYHSDHRPPSSSDY 256 GG ++ H+ +Y Sbjct: 250 SVNIGGGLAVEYTQHKHHQDKNY 272 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 422 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 481 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 482 HDIDIDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 539 >gi|307167492|gb|EFN61065.1| Laminin subunit alpha [Camponotus floridanus] Length = 3660 Score = 39.8 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 17/214 (7%), Positives = 37/214 (17%), Gaps = 3/214 (1%) Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 +T K T + + FG + L Sbjct: 292 CRCQHNTCGPQCATCCKGFEQKKWQQSTASKKFTCEPCNCFGHSDECSYDPEMDEKHLSL 351 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + Q + + + + R N + Y + + Sbjct: 352 DIHGNYEGGGICQNCKHNTEGINCNRCKPRFYRPRDKPLNATDVCQPCDCDYFYSTGNCA 411 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK---SADKTFVILDVA 307 S+ N G + Sbjct: 412 DSTGKCECRKEYAPPNCDSCNYGYFGYPTCRPCECHLQGTDGYHCEATDGYCPCRFNYAG 471 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIV 341 + Y + + V ++ D+V Sbjct: 472 HYCNLCAEGYYKFPDCLPCVCNLLGAMNGVCDVV 505 >gi|288941546|ref|YP_003443786.1| alanine racemase [Allochromatium vinosum DSM 180] gi|288896918|gb|ADC62754.1| alanine racemase [Allochromatium vinosum DSM 180] Length = 367 Score = 39.8 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 6/58 (10%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANS----NQAVIKTLAHLGSGLDIVSEGE 85 AI NY + + +KAN+ AV +TLA G + E Sbjct: 12 IHLDAIRHNYRRAKSLAPRSRALAV--VKANAYGHGAIAVARTLADEADGFAVACVEE 67 >gi|19703887|ref|NP_603449.1| Serine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714049|gb|AAL94748.1| Serine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 369 Score = 39.8 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 17/210 (8%), Positives = 58/210 (27%), Gaps = 4/210 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 ++TP + A++ N + + +K + + +++ G+ G+ Sbjct: 4 KELKTPTILLNIEALKNNIKKYQKLCTEYKKELWPMIKTHKSMEIVEMQIKEGATGVLCG 63 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 + E+ + + + + + + E + + Sbjct: 64 TLDEVEACCQIGIKKIMYAYPVASEENIKRIIEISKKTEFIIRLDSLE---AAIKINKMA 120 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + N +++ H+ + K F + ++ L + + Sbjct: 121 ETENVIINYNIIVDSGLHRFGVSLKNLLTFAEELKKLKYLKLKGISSHPGHVYSSTCEAD 180 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNI 231 Q + K L ++ + Sbjct: 181 IQQYVLNECETLRKAKEILEKEGYYLEYIT 210 >gi|291405391|ref|XP_002718933.1| PREDICTED: scavenger receptor class F, member 1 isoform 2 [Oryctolagus cuniculus] Length = 825 Score = 39.8 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 26/291 (8%), Positives = 48/291 (16%), Gaps = 17/291 (5%) Query: 77 GLDIVSEGELRRALAAPVPA-----ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G D EGE+ + G+ E + + Sbjct: 58 GPDACREGEVCVKPGLCRCPPGFFGAQCSSRCPGQYWGPDCRESCPCHPHGQCEPATGVC 117 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + P + + T + Q + A G Sbjct: 118 QCQADRWGARCEFPCTCGAHGHCDPATGECRCDPGWWSSTCRRPCQCNLAAARCEPATGA 177 Query: 192 KISGVDM--HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + H S A + R + Q + G A Sbjct: 178 CLCESGWWGHRCSFRCACHDSPCAQETGRCTCRPGWWGPECRQRCECVRGRCSAVSGRCT 237 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 P + + S + + Sbjct: 238 CPPGFR---GVRCELPCPSGSYGAQCRDSC--GHCKQNKPCSPDTGSCESCEPGWNGTQC 292 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP--ICETGDFIALNRKIA 358 P G G C+ G ++ + Sbjct: 293 RQPCPPGTFGEGCRQQCPRCRGGEACQPDS--GHCAHCDPG-WLGPRCEDP 340 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 21/276 (7%), Positives = 48/276 (17%), Gaps = 7/276 (2%) Query: 70 TLAHLGSGLDI-VSEGELRRAL-AAPVPAERIVFSGVGKTIDEIDLALQ----SGIYCFN 123 L G + + S EL+ E + G Sbjct: 21 LLDPGGQHVCVGSSPSELQCCPGWRQKDHECTIPICEGPDACREGEVCVKPGLCRCPPGF 80 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS-LY 182 ++ + Q +++ A + + + P Sbjct: 81 FGAQCSSRCPGQYWGPDCRESCPCHPHGQCEPATGVCQCQADRWGARCEFPCTCGAHGHC 140 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ + + + GH Sbjct: 141 DPATGECRCDPGWWSSTCRRPCQCNLAAARCEPATGACLCESGWWGHRCSFRCACHDSPC 200 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 A + + Q ++ + GR V + + Sbjct: 201 AQETGRCTCRPGWWGPECRQRCECVRGRCSAVSGRCTCPPGFRGVRCELPCPSGSYGAQC 260 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +P D + G + Sbjct: 261 RDSCGHCKQNKPCSPDTGSCESCEPGWNGTQCRQPC 296 >gi|228065909|gb|ACP56699.1| arginine decarboxylase [Lithospermum erythrorhizon] Length = 708 Score = 39.8 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 12/82 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGS--- 76 P ++ + AFD G Y +K N ++ +++ + GS Sbjct: 102 PMIVRFPDVLKNRLESLQFAFDSAILAQGYGGHYQGVYPVKCNQDRYIVEDIVQFGSSFR 161 Query: 77 -GLDIVSEGELRRALAAPVPAE 97 GL+ S+ EL A++ Sbjct: 162 FGLEAGSKPELLLAMSCLCKGS 183 >gi|149634120|ref|XP_001506672.1| PREDICTED: similar to laminin beta 2-like chain [Ornithorhynchus anatinus] Length = 1850 Score = 39.8 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 22/280 (7%), Positives = 45/280 (16%), Gaps = 14/280 (5%) Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G G SE F + L++ + Sbjct: 827 GFGPTGCSE------CRCSPEGATSRFCDPVSGQCQCRLSIMGRQCDRCQPGQWGFPQCR 880 Query: 135 QRAVS-LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 + ++ D T + + +G P+ Sbjct: 881 PCQCNGHAEECHPHTGACQDCRDATAGRHCERCLDGYYGDPVLGSGQQCRPCPCPGYPGS 940 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 ++ R + GG ++ S Sbjct: 941 RHYHGSSCQADGHTGQIVCLCAPGYAGSRCDRCSAGYFGRPVEEGGDCRPCQCNNNIDPS 1000 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLV-----ADVGILVTKVISIKKSADKTFVILDVAM 308 A P + + + Sbjct: 1001 DPAACEPRSGQCQRCLHNTQGPRCAHCRPGYYGNALQRSCRRCTCNLQGTVPTRCPLSGP 1060 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI-CET 347 R T + + N + + G CE Sbjct: 1061 CYCDRITGHCSCRPHVLGRNCDRCAPNF-WNFGGTHGCEP 1099 >gi|254255433|ref|ZP_04948749.1| hypothetical protein BDAG_04773 [Burkholderia dolosa AUO158] gi|124901170|gb|EAY71920.1| hypothetical protein BDAG_04773 [Burkholderia dolosa AUO158] Length = 398 Score = 39.8 bits (91), Expect = 0.85, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 19/65 (29%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + +N + + +K V+ G+ G+ + + E Sbjct: 30 TPAALIDVARMNRNIERMQQRMNALGVRFRPHVKTTKCTQVVDAQMKAGARGITVSTLKE 89 Query: 86 LRRAL 90 R Sbjct: 90 AERFF 94 >gi|291405389|ref|XP_002718932.1| PREDICTED: scavenger receptor class F, member 1 isoform 1 [Oryctolagus cuniculus] Length = 739 Score = 39.8 bits (91), Expect = 0.85, Method: Composition-based stats. Identities = 20/276 (7%), Positives = 49/276 (17%), Gaps = 7/276 (2%) Query: 70 TLAHLGSGLDI-VSEGELRRAL-AAPVPAERIVFSG----VGKTIDEIDLALQSGIYCFN 123 L G + + S EL+ E + + + Sbjct: 21 LLDPGGQHVCVGSSPSELQCCPGWRQKDHECTIPICEGPDACREGEVCVKPGLCRCPPGF 80 Query: 124 VESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS-LY 182 ++ + Q +++ A + + + P Sbjct: 81 FGAQCSSRCPGQYWGPDCRESCPCHPHGQCEPATGVCQCQADRWGARCEFPCTCGAHGHC 140 Query: 183 AYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGI 242 A+ + + + GH Sbjct: 141 DPATGECRCDPGWWSSTCRRPCQCNLAAARCEPATGACLCESGWWGHRCSFRCACHDSPC 200 Query: 243 AYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFV 302 A + + Q ++ + GR V + + Sbjct: 201 AQETGRCTCRPGWWGPECRQRCECVRGRCSAVSGRCTCPPGFRGVRCELPCPSGSYGAQC 260 Query: 303 ILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 +P D + G + Sbjct: 261 RDSCGHCKQNKPCSPDTGSCESCEPGWNGTQCRQPC 296 Score = 38.3 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 23/268 (8%), Positives = 41/268 (15%), Gaps = 12/268 (4%) Query: 77 GLDIVSEGELRRALAAPVPA-----ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 G D EGE+ + G+ E + + Sbjct: 58 GPDACREGEVCVKPGLCRCPPGFFGAQCSSRCPGQYWGPDCRESCPCHPHGQCEPATGVC 117 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + P + + T + Q + A G Sbjct: 118 QCQADRWGARCEFPCTCGAHGHCDPATGECRCDPGWWSSTCRRPCQCNLAAARCEPATGA 177 Query: 192 KISGVDM--HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 + H S A + R + Q + G A Sbjct: 178 CLCESGWWGHRCSFRCACHDSPCAQETGRCTCRPGWWGPECRQRCECVRGRCSAVSGRCT 237 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 P + + S + + Sbjct: 238 CPPGFR---GVRCELPCPSGSYGAQCRDSC--GHCKQNKPCSPDTGSCESCEPGWNGTQC 292 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIH 337 P G Sbjct: 293 RQPCPPGTFGEGCRQQCPRCRGGEACQP 320 >gi|13476878|ref|NP_108447.1| metal-activated pyridoxal enzyme [Mesorhizobium loti MAFF303099] gi|14027639|dbj|BAB53908.1| metal-activated pyridoxal enzyme [Mesorhizobium loti MAFF303099] Length = 352 Score = 39.8 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 17/67 (25%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP E N D + +K + K G+ G+ GE Sbjct: 9 TPSILIDAARAEANIARAQAHADKNGLKLRPHIKTHKLPYWAKKQVAAGAVGITCQKIGE 68 Query: 86 LRRALAA 92 A Sbjct: 69 AEVMTDA 75 >gi|315929199|gb|EFV08421.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 311 Score = 39.8 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 34/120 (28%), Gaps = 20/120 (16%) Query: 3 AFKYFEGSLHAE---NVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--- 51 F G + ++ + + P I+K F+ Sbjct: 12 NFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKE 71 Query: 52 -----DTMVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFS 102 Y LK N +K L LG GL+ S+ EL A+A I + Sbjct: 72 FGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVN 131 >gi|290981548|ref|XP_002673492.1| predicted protein [Naegleria gruberi] gi|284087076|gb|EFC40748.1| predicted protein [Naegleria gruberi] Length = 2634 Score = 39.8 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 27/312 (8%), Positives = 59/312 (18%), Gaps = 21/312 (6%) Query: 45 SNAFDGMDTMVCYAL-KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSG 103 F G + + Y K N+ +V G S E V+ Sbjct: 904 KEGFLGNNCELYYCYGKVNNETSVC------GGNGKCSSLNTCECRDGYIGD-ECSVYKC 956 Query: 104 VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKIS 163 ++ + G + ++ +N + Sbjct: 957 FETFSNDSTVCSSFGKCSGIDTCICNAEHFGEKC---------ELTWCHGKASNDSSVCN 1007 Query: 164 TGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQ 223 + F I + D + S S + L Sbjct: 1008 GKGICNSFDTCICDQDYFGETCQDFKCGTLLKNDSMVCSGSGSCSSPNNCTCLDGYFGTH 1067 Query: 224 LRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADV 283 + ++ + P+ H +E V Sbjct: 1068 CELFECQGKLLNDSNVCSGN--GTCQSPNKCQCKEGFHGNECESFDCFGIEKSFKTVCSS 1125 Query: 284 GILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 A + + + P + G Sbjct: 1126 AGSCISPEHCVCRAGFYGADCSKYECYGLLFNNSNVCSGNGKCLEPESCQCKEGY--YGN 1183 Query: 344 ICETGDFIALNR 355 +C++ D + + Sbjct: 1184 VCDSFDCFGIEK 1195 >gi|148926933|ref|ZP_01810610.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp. jejuni CG8486] gi|157415035|ref|YP_001482291.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81116] gi|145845017|gb|EDK22114.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp. jejuni CG8486] gi|157385999|gb|ABV52314.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81116] gi|307747674|gb|ADN90944.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni M1] gi|315931179|gb|EFV10151.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 327] Length = 610 Score = 39.8 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 34/120 (28%), Gaps = 20/120 (16%) Query: 3 AFKYFEGSLHAE---NVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--- 51 F G + ++ + + P I+K F+ Sbjct: 12 NFIIKNGKVCINHEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKE 71 Query: 52 -----DTMVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFS 102 Y LK N +K L LG GL+ S+ EL A+A I + Sbjct: 72 FGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVN 131 >gi|57237609|ref|YP_178857.1| arginine decarboxylase [Campylobacter jejuni RM1221] gi|57166413|gb|AAW35192.1| arginine decarboxylase [Campylobacter jejuni RM1221] Length = 611 Score = 39.8 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 34/120 (28%), Gaps = 20/120 (16%) Query: 3 AFKYFEGSLHAE---NVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--- 51 F G + ++ + + P I+K F+ Sbjct: 13 NFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKE 72 Query: 52 -----DTMVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFS 102 Y LK N +K L LG GL+ S+ EL A+A I + Sbjct: 73 FGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVN 132 >gi|218562392|ref|YP_002344171.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|112360098|emb|CAL34892.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926010|gb|ADC28362.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni IA3902] Length = 611 Score = 39.8 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 34/120 (28%), Gaps = 20/120 (16%) Query: 3 AFKYFEGSLHAE---NVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--- 51 F G + ++ + + P I+K F+ Sbjct: 13 NFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKE 72 Query: 52 -----DTMVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFS 102 Y LK N +K L LG GL+ S+ EL A+A I + Sbjct: 73 FGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVN 132 >gi|86152170|ref|ZP_01070382.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 260.94] gi|86153261|ref|ZP_01071465.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613374|ref|YP_001000453.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|167005396|ref|ZP_02271154.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|283957254|ref|ZP_06374715.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 1336] gi|315124287|ref|YP_004066291.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840955|gb|EAQ58205.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 260.94] gi|85842987|gb|EAQ60198.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249384|gb|EAQ72344.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176] gi|283791266|gb|EFC30074.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 1336] gi|315018009|gb|ADT66102.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 610 Score = 39.8 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 34/120 (28%), Gaps = 20/120 (16%) Query: 3 AFKYFEGSLHAE---NVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--- 51 F G + ++ + + P I+K F+ Sbjct: 12 NFIIKNGKVCINHEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKE 71 Query: 52 -----DTMVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFS 102 Y LK N +K L LG GL+ S+ EL A+A I + Sbjct: 72 FGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVN 131 >gi|86150176|ref|ZP_01068403.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597564|ref|ZP_01100798.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 84-25] gi|85839292|gb|EAQ56554.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190156|gb|EAQ94131.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 84-25] gi|315058218|gb|ADT72547.1| Arginine decarboxylase [Campylobacter jejuni subsp. jejuni S3] gi|315928309|gb|EFV07625.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 610 Score = 39.8 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 34/120 (28%), Gaps = 20/120 (16%) Query: 3 AFKYFEGSLHAE---NVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--- 51 F G + ++ + + P I+K F+ Sbjct: 12 NFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKE 71 Query: 52 -----DTMVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFS 102 Y LK N +K L LG GL+ S+ EL A+A I + Sbjct: 72 FGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVN 131 >gi|284036152|ref|YP_003386082.1| alanine racemase domain protein [Spirosoma linguale DSM 74] gi|283815445|gb|ADB37283.1| alanine racemase domain protein [Spirosoma linguale DSM 74] Length = 371 Score = 39.8 bits (91), Expect = 0.93, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 3/73 (4%) Query: 17 SLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 S+ +A + TP + +N + + D +D + +K + ++ + L G Sbjct: 8 SIADIA-RLDTPALVIYPERVRQNIASLVRSIDSVD-RLRPHVKTSKSREASQLLMDAGI 65 Query: 77 -GLDIVSEGELRR 88 L + E Sbjct: 66 RKLKCATIAEAEM 78 >gi|332160780|ref|YP_004297357.1| hypothetical protein YE105_C1158 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604662|emb|CBY26160.1| protein containing an Alanine Racemase Domain [Yersinia enterocolitica subsp. palearctica Y11] gi|325665010|gb|ADZ41654.1| hypothetical protein YE105_C1158 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860399|emb|CBX70708.1| uncharacterized protein yhfX [Yersinia enterocolitica W22703] Length = 391 Score = 39.8 bits (91), Expect = 0.94, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 22/74 (29%), Gaps = 2/74 (2%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLGS-GLDIVSEGELR 87 Y +++N + K N + K L G G+ V E+R Sbjct: 31 YVIDVDQVKQNARLLLETATRYGITLYLMSKQFGRNPLLCKLLLECGYQGIVAVDFKEVR 90 Query: 88 RALAAPVPAERIVF 101 + +P + Sbjct: 91 QLYQYNLPVAHVGH 104 >gi|134804|sp|P22220|SPE1_AVESA RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC gi|16120|emb|CAA40137.1| arginine decarboxylase [Avena sativa] Length = 607 Score = 39.8 bits (91), Expect = 0.94, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 30/104 (28%), Gaps = 10/104 (9%) Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG---DFIALNR 355 + + + + V+ ++ A +V C++ D + Sbjct: 430 YNYHMNLSVFSLMPDYWGIQHLFPM-MPVSRLDEKPTHKATLVDVTCDSDGKVDKFIRDT 488 Query: 356 KIALPRPGD------LLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 + P D + + TGAY S +N + V Sbjct: 489 ETMPLHPLDPKLGGYYVAVLLTGAYQEALSNKHNLFGGPSLVRV 532 >gi|297572374|gb|ADI46542.1| integrin beta 1 [Capsaspora owczarzaki] Length = 1064 Score = 39.8 bits (91), Expect = 0.98, Method: Composition-based stats. Identities = 26/314 (8%), Positives = 49/314 (15%), Gaps = 28/314 (8%) Query: 62 NSNQAVIK-TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 S V + GSG+D + G + P + + Sbjct: 575 CSCPTVAPGCMKPSGSGVDCENHGSCKCNQCTCRPGYTGTYCDTPVLPCPNSCSGHGNCT 634 Query: 121 CFNVESESELK--------TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK------ 166 + E G R + + Sbjct: 635 AGSCVCEPGWTGSSCSCSTVCPDNCSGHGTCQCGVCRCQAGYSGLNCACNNNCPSRGGLT 694 Query: 167 ---------KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 + + S P + + Sbjct: 695 CSGHGQCNNCDGTCTCDVGYQSKPDCSCSDAPCPNGCSGHGTCTCGVCTCSGLYTGADCS 754 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGR 277 ++ N + + P + G G Sbjct: 755 CWNVGCNSASNCNSALGHGSCNCSQCVCTGNYTPETECLCDRTEHCAGWDGTSECSGHGT 814 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY---IVNPAGDRL 334 V+D + + + N Sbjct: 815 -CVSDATQCHQCKCDADAQGSPLYSGASCNCSLVECGGETINGFKCNQAAGNGECICGTC 873 Query: 335 HIHADIVGPICETG 348 H + GP CE G Sbjct: 874 HCKNNFTGPSCECG 887 >gi|145492282|ref|XP_001432139.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124399248|emb|CAK64742.1| unnamed protein product [Paramecium tetraurelia] Length = 2448 Score = 39.8 bits (91), Expect = 0.98, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 61/288 (21%), Gaps = 18/288 (6%) Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 NSNQ + T S EL + P + + L Sbjct: 895 CNSNQKLWHTT----ICSACDSPQELVQNNCEPKCGDTQLTLYEECEDGNNILDDLCYNC 950 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 F + +T + + + + Sbjct: 951 QFQCPKHCLTCNSATTLPCPDICGDGIIS-----GNEECEDGNTIQYDGCYNCQYQCQPA 1005 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 + S V + + + + + T+Q G Sbjct: 1006 CTKCILG-KCYECSTVGWYTDTSTTNWQCKEQCGDDILTGTEQCEDLNT-----SDTDGC 1059 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 + + SS DY + + L R + D I+ + D Sbjct: 1060 HNCRYFCRKGCSSCDYTTGTCLSCEQPGYEPYLYYCRNICGDGLIVNGLYGFFPEYCDDG 1119 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 N + P +VG ICE+G Sbjct: 1120 NTNYSDYCNSSCQDCATGYKRSNVKKCEPICGDNLK---VVGEICESG 1164 >gi|71065945|ref|YP_264672.1| D-3-hydroxyaspartate aldolase [Psychrobacter arcticus 273-4] gi|71038930|gb|AAZ19238.1| D-3-hydroxyaspartate aldolase [Psychrobacter arcticus 273-4] Length = 383 Score = 39.4 bits (90), Expect = 0.98, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + + K + + V LG G+ Sbjct: 21 ADIQTPCLILDLDALERNVKKMGDYAKAHNMRHRSHGKMHKSVDVQNLQEELGGAIGVCC 80 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 81 QKVSEAEV 88 >gi|290979746|ref|XP_002672594.1| B-lectin domain-containing protein [Naegleria gruberi] gi|284086172|gb|EFC39850.1| B-lectin domain-containing protein [Naegleria gruberi] Length = 2047 Score = 39.4 bits (90), Expect = 0.99, Method: Composition-based stats. Identities = 14/267 (5%), Positives = 40/267 (14%), Gaps = 6/267 (2%) Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 S G Sbjct: 529 CSSHGSCDSPNNCTCKPGYYGNRCEFHNCYGTLFNSSGVCSTHGQCLSPNNCFCEAGFYG 588 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 F V+ + + + G + + + ++ + + Sbjct: 589 PECAEYDCFGVHKNSS---NVCFQHGACLSPNNCSCQEGYFSFDCSNHRCYGYLFNDTTN 645 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 + + + Q S+ + ++ + Sbjct: 646 VCNGHGSCPYPNNCTCQSGYYGYQCESHECFGKLFNISTVCSTHGQCLSPNNCFCEAGYY 705 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + + L S ++ T+ Sbjct: 706 GPECAEYDCFGVHKNSSNVCFQHGTCLSPNNCSCQEGYYGFDCSNHNCFGILFNDTMNVC 765 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICE 346 + V + G CE Sbjct: 766 NGHGSCFVPDNCTCHPGYY---GKTCE 789 >gi|315636923|ref|ZP_07892147.1| arginine 2-monooxygenase [Arcobacter butzleri JV22] gi|315478753|gb|EFU69462.1| arginine 2-monooxygenase [Arcobacter butzleri JV22] Length = 603 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 13/108 (12%), Positives = 29/108 (26%), Gaps = 11/108 (10%) Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICET-GDF---IALNRKIALPRPG--DL-LYI 368 + + A + C++ G+ + + D L Sbjct: 452 WGINQEFPIMPITHLDKKPTRSASLWDITCDSDGEIPFDMKKPLYLHDVNLNKEDYFLGF 511 Query: 369 EKTGAYGAVQSGTYNSRLLIPE--IMVNGSQFHI--IRPRMTFQELIE 412 GAY +N E ++ + H+ I +++E Sbjct: 512 FNVGAYQDTLGMKHNLFSHPTEVNVVFKDGEVHLEKILESQKIIDILE 559 >gi|157737210|ref|YP_001489893.1| arginine decarboxylase [Arcobacter butzleri RM4018] gi|157699064|gb|ABV67224.1| arginine decarboxylase [Arcobacter butzleri RM4018] Length = 603 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 13/108 (12%), Positives = 29/108 (26%), Gaps = 11/108 (10%) Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPICET-GDF---IALNRKIALPRPG--DL-LYI 368 + + A + C++ G+ + + D L Sbjct: 452 WGINQEFPIMPITHLDKKPTRSASLWDITCDSDGEIPFDMKKPLYLHDVNLNKEDYFLGF 511 Query: 369 EKTGAYGAVQSGTYNSRLLIPE--IMVNGSQFHI--IRPRMTFQELIE 412 GAY +N E ++ + H+ I +++E Sbjct: 512 FNVGAYQDTLGMKHNLFSHPTEVNVVFKDGEVHLEKILESQKIIDILE 559 >gi|260464358|ref|ZP_05812549.1| alanine racemase domain protein [Mesorhizobium opportunistum WSM2075] gi|259029828|gb|EEW31113.1| alanine racemase domain protein [Mesorhizobium opportunistum WSM2075] Length = 352 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 17/67 (25%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP E N D + +K + K G+ G+ GE Sbjct: 9 TPSILIDAARAEANIARAQAHADKNGLKLRPHIKTHKLPYWAKKQVAAGAVGITCQKIGE 68 Query: 86 LRRALAA 92 A Sbjct: 69 AEVMAEA 75 >gi|291236574|ref|XP_002738214.1| PREDICTED: zinc finger protein 347-like [Saccoglossus kowalevskii] Length = 1148 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 24/275 (8%), Positives = 53/275 (19%), Gaps = 3/275 (1%) Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK- 131 G G D S E+ + + V+ + LK Sbjct: 603 QCGKGFDCRSNLEMHYRFHTGEKQFKCEICDKAYFTKSHLKSHIVVHQEGFVDVKKNLKS 662 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 K + + N + ++H + Sbjct: 663 KCEHCDYRCRDKGSLNRHMKKHTNTVDLPLKCEVCNKGFVIQSDLKVHMRFHTGEKPFQC 722 Query: 192 KISGVDMHIGSQIDQIESFHKAFK--LLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 ++ S + + H K + ++ R H +H+ GG Sbjct: 723 ELCEKRYFTRSHLSEHMRIHTGEKPYMCEKCSKTFRLKNHLREHMISHGGQRAHQCDQCG 782 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + +H + E L + Sbjct: 783 KGFTRALGLTVHMRTHTGEKPYQCELCGRCFTTSSHLRSHERMHAGIKRTARKENGTKHM 842 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPI 344 Y ++ + ++ G Sbjct: 843 CGQCGKAYYTVSDLTIHMRVHTGERPYQCELCGRT 877 >gi|284046325|ref|YP_003396665.1| alanine racemase domain protein [Conexibacter woesei DSM 14684] gi|283950546|gb|ADB53290.1| alanine racemase domain protein [Conexibacter woesei DSM 14684] Length = 386 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 1/76 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDI 80 ++TP A+E+N + LK + AV + G +G Sbjct: 6 VAELETPAVVVDLGALERNVARAGAYAREHGLALWPHLKTHKTVAVAERQRAAGVAGFTA 65 Query: 81 VSEGELRRALAAPVPA 96 E R A + Sbjct: 66 AKTTEAERFAAHGLGP 81 >gi|254448149|ref|ZP_05061612.1| alanine racemase [gamma proteobacterium HTCC5015] gi|198262275|gb|EDY86557.1| alanine racemase [gamma proteobacterium HTCC5015] Length = 323 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 29/291 (9%), Positives = 66/291 (22%), Gaps = 10/291 (3%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKA----NSNQAVIKTLAHLGSGLDIVSEGELR 87 AI N A V A+KA + V+ L + S E Sbjct: 9 IDLEAIRHNVKVAKRAAPQS--RVLAAVKADAYGHGLTRVLSAF-EEVDALAVASVEE-A 64 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL-KTLNQRAVSLGKKAPI 146 AL A + +V G+ + + F+ + + + + L + Sbjct: 65 VALRAVSDKDIVVLQGIRQPEHLALCTKHALQPVFHQSQQLDWLSRWSSQDSMLSVWLKV 124 Query: 147 AFRVNP-DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQID 205 ++ + + ++ + + + + + + D Sbjct: 125 DSGMHRLGFDLDAVERAFVRLSDHAAVNRVACMTHMACADDRSDDYTLQQLKAFERVTAD 184 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 A Q + + G I + + + Sbjct: 185 LSAPRSAANSACVLGWPQAHYDWVRPGIMLYGASPFIGDTAQDWGLQPAMRLTAPIVAIK 244 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 + + + GR V + + V T Sbjct: 245 HCRKGDAVGYGRSWVCPKPMTLGVVAIGYGDGYPRHANNQTPAWVKGHTTH 295 >gi|93005807|ref|YP_580244.1| alanine racemase-like [Psychrobacter cryohalolentis K5] gi|92393485|gb|ABE74760.1| D-3-hydroxyaspartate aldolase [Psychrobacter cryohalolentis K5] Length = 384 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 4/68 (5%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + + K + + V LG G+ Sbjct: 22 ADIQTPCLILDLDALERNVKKMGDYAKAHNMRHRSHGKMHKSVDVQNLQEELGGAIGVCC 81 Query: 81 --VSEGEL 86 VSE E+ Sbjct: 82 QKVSEAEV 89 >gi|298292611|ref|YP_003694550.1| alanine racemase domain protein [Starkeya novella DSM 506] gi|296929122|gb|ADH89931.1| alanine racemase domain protein [Starkeya novella DSM 506] Length = 391 Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 20/67 (29%), Gaps = 2/67 (2%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDI 80 +QTP A+E+N + K + + V K LG G+ Sbjct: 29 ADIQTPCLILDLDALERNIRKMGDYAKAHGMRHRSHGKMHKSVDVQKLQEALGGSVGVCC 88 Query: 81 VSEGELR 87 E Sbjct: 89 QKVAEAE 95 >gi|147676557|ref|YP_001210772.1| aspartate alpha-decarboxylase [Pelotomaculum thermopropionicum SI] gi|189029318|sp|A5D5T6|PAND_PELTS RecName: Full=Aspartate 1-decarboxylase; AltName: Full=Aspartate alpha-decarboxylase; Contains: RecName: Full=Aspartate 1-decarboxylase beta chain; Contains: RecName: Full=Aspartate 1-decarboxylase alpha chain; Flags: Precursor gi|146272654|dbj|BAF58403.1| aspartate 1-decarboxylase [Pelotomaculum thermopropionicum SI] Length = 132 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 26/97 (26%) Query: 320 YHEINYIVNPAGDRLHIHADIVGP-----ICETGDFIALNRKIALPRPGDLL-----YIE 369 +E +VN I GP IC G A R L +PGDL+ I Sbjct: 40 PNEKVQVVNNNNGARFETYVIKGPRGSGVICLNG---AAAR---LVQPGDLVIIISYAIM 93 Query: 370 KTGAYGAVQSGTYNSRLLIPEIMVNG-SQFHIIRPRM 405 G ++ TY +MV+G ++ +R Sbjct: 94 DAG-----EARTY----RPAVVMVDGRNKIVEVRQGE 121 >gi|124003885|ref|ZP_01688733.1| conserved hypothetical protein [Microscilla marina ATCC 23134] gi|123990940|gb|EAY30407.1| conserved hypothetical protein [Microscilla marina ATCC 23134] Length = 372 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 14/55 (25%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 P +N N + K + + AV K G VS Sbjct: 7 PTLLIDEAKCRRNIDMMVNKAKKHGIRLRPHFKTHQSVAVGKWCQEAGIEAITVS 61 >gi|320166340|gb|EFW43239.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864] Length = 1035 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 26/314 (8%), Positives = 49/314 (15%), Gaps = 28/314 (8%) Query: 62 NSNQAVIK-TLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 S V + GSG+D + G + P + + Sbjct: 530 CSCPTVAPGCMKPSGSGVDCENHGSCKCNQCTCRPGYTGTYCDTPVLPCPNSCSGHGNCT 589 Query: 121 CFNVESESELK--------TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGK------ 166 + E G R + + Sbjct: 590 AGSCVCEPGWTGSSCSCSTVCPDNCSGHGTCQCGVCRCQAGYSGLNCACNNNCPSRGGLT 649 Query: 167 ---------KEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 + + S P + + Sbjct: 650 CSGHGQCNNCDGTCTCDVGYQSKPDCSCSDAPCPNGCSGHGTCTCGVCTCSGLYTGADCS 709 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGR 277 ++ N + + P + G G Sbjct: 710 CWNVGCNSASNCNSALGHGSCNCSQCVCTGNYTPETECLCDRTEHCAGWDGTSECSGHGT 769 Query: 278 FLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINY---IVNPAGDRL 334 V+D + + + N Sbjct: 770 -CVSDATQCHQCKCDADAQGSPLYSGASCNCSLVECGGETINGFKCNQAAGNGECICGTC 828 Query: 335 HIHADIVGPICETG 348 H + GP CE G Sbjct: 829 HCKNNFTGPSCECG 842 >gi|283954332|ref|ZP_06371853.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp. jejuni 414] gi|283794131|gb|EFC32879.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp. jejuni 414] Length = 610 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 80/278 (28%), Gaps = 24/278 (8%) Query: 3 AFKYFEGSLHAE---NVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--- 51 F G + ++ + + P I+K F+ Sbjct: 12 NFIIKNGKVCINHEKKPAIIDIVKELRDDGYKGPLLLRFPHFIQKQIENIYGNFNKARKE 71 Query: 52 -----DTMVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFS 102 Y LK N +K L LG GL+ S+ EL A+A I + Sbjct: 72 FGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVN 131 Query: 103 GVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKI 162 G + + + + L L ++ + + ++ Sbjct: 132 GFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVG 191 Query: 163 STGKKEDKFGIPIHQIHSLYAYASTLPGVKI----SGVDMHIGSQIDQIESFHKAFKLLR 218 K + L + L K+ + + H+GSQI +I KA Sbjct: 192 IWAKSGGIYSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAG 251 Query: 219 DLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 ++ +LR G GG +S + + +Y Sbjct: 252 NIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKNRNY 289 >gi|33591729|ref|NP_879373.1| putative metal-activated pyridoxal enzyme [Bordetella pertussis Tohama I] gi|33571372|emb|CAE44851.1| putative metal-activated pyridoxal enzyme [Bordetella pertussis Tohama I] gi|332381147|gb|AEE65994.1| putative metal-activated pyridoxal enzyme [Bordetella pertussis CS] Length = 381 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 1/71 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIV 81 + TP ++ N + +G+ + +K + V + LA G+ + Sbjct: 10 DTLDTPAAIVDVARMQHNIARMQDRMNGLGVSLRPHVKTSKCTPVALAQLAAGAHGVTVS 69 Query: 82 SEGELRRALAA 92 + E + AA Sbjct: 70 TLKEAEQFFAA 80 >gi|317127074|ref|YP_004093356.1| alanine racemase [Bacillus cellulosilyticus DSM 2522] gi|315472022|gb|ADU28625.1| alanine racemase [Bacillus cellulosilyticus DSM 2522] Length = 381 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 33/127 (25%), Gaps = 6/127 (4%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKAN----SNQAVIKTLAHLGS-GLDIVSEGEL 86 AI +N N + A+KAN S+ V + G+ L + E Sbjct: 15 VDLNAIRENVKNLKNHLPSH-VHIMAAVKANGYGHSSVPVAEAALQAGATYLGVALLDEA 73 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 + A +V V + + F E E + + + Sbjct: 74 IELRENGIKAPILVLGYVSPKYVNVAAEYDIRLTVFQSEWVEEAAKVLEADNKGKIACHV 133 Query: 147 AFRVNPD 153 Sbjct: 134 KIDTGMG 140 >gi|242309691|ref|ZP_04808846.1| arginine decarboxylase [Helicobacter pullorum MIT 98-5489] gi|239523692|gb|EEQ63558.1| arginine decarboxylase [Helicobacter pullorum MIT 98-5489] Length = 617 Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 78/280 (27%), Gaps = 26/280 (9%) Query: 2 SAFKYFEGSL---HAENVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGMDT 53 F +G + +L + + P I+K + F+ Sbjct: 12 DDFIIEDGKVKVNFCNKPALIDIVKQVREEGYRGPLLVRFPHLIKKQVEKIFSHFENSIK 71 Query: 54 MVCY--------ALKANSNQ-AVIKTLAH---LGSGLDIVSEGELRRALAAPVPAERIVF 101 Y +K N ++ + GL+ S+ EL A + Sbjct: 72 EYHYKGKFKAVFPIKVNHFPNFILPLMEQTQNRCYGLEAGSKSEL-IIAMAYTNENAPIT 130 Query: 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAV-----SLGKKAPIAFRVNPDINA 156 K + I L + ++ E + + I R+ Sbjct: 131 VNGFKDKEMISLGFIAAKMGHDITLTIEGLNELETIIEVSKSMGKPYPNIGLRIRLHSTG 190 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL 216 S G + ++Y K + + HIGSQI I KA + Sbjct: 191 VGIWAKSGGINSKFGLTATELVEAIYLLKKNKLLDKFTMIHFHIGSQISDIAPLKKALRE 250 Query: 217 LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 ++ +LR G + GG ++ H + +Y Sbjct: 251 AGNIYAELRKMGAKNLNNVNIGGGLAVEYTQHEAHQNRNY 290 >gi|73971032|ref|XP_531893.2| PREDICTED: similar to MEGF10 protein [Canis familiaris] Length = 1548 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 20/279 (7%), Positives = 46/279 (16%), Gaps = 22/279 (7%) Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A E+ ++ + + + + + Sbjct: 487 YRTAYRHGEKTMYRRKSQCCPGFYESREMCVPHCADKCVHGRCIAPNTCQCEPGWGGTNC 546 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA---YASTLPGVKISGVDMHIGSQID 205 D + S + ++ A G + Q Sbjct: 547 SSACDGDHWGPHCSSRCQCKNGALCNPITGACHCAAGFRGWRCEDRCEQGTYGNDCHQRC 606 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 Q ++ + + G + + G G + R P + Sbjct: 607 QCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQC--EQRCPCQNGGICHHVTGEC 664 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN- 324 + + + + T + T E Sbjct: 665 SCPSGWLGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATGQCHCSPGYTGERCQDECPV 724 Query: 325 --------YIVNPAGDRLHIHAD--------IVGPICET 347 H G CE Sbjct: 725 GTYGVRCAETCQCVNGGKCYHVSGSCLCEAGFAGEHCEA 763 >gi|187477177|ref|YP_785201.1| pyridoxal phosphate binding aldolase [Bordetella avium 197N] gi|115421763|emb|CAJ48274.1| putative pyridoxal phosphate binding aldolase [Bordetella avium 197N] Length = 382 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 18/67 (26%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGE 85 TP +E N + + LK + V + G + + E Sbjct: 14 TPCLLLDEARMEANIEYMKARMRRLGVTLRPHLKTPKSVEVARRAMQTPQGPAAVSTLQE 73 Query: 86 LRRALAA 92 + A Sbjct: 74 AEQFARA 80 >gi|6646840|emb|CAB64599.1| arginine decarboxylase 1 [Datura stramonium] Length = 724 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 12/79 (15%) Query: 31 CYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKANSNQAVIKTLAHLGS----GL 78 ++ + +AFD Y +K N ++ V++ + GS GL Sbjct: 120 VRFPDVLKNRLESLQSAFDMAVHSQGYEAHYQGVYPVKCNQDRFVVEDIVKFGSPYRFGL 179 Query: 79 DIVSEGELRRALAAPVPAE 97 + S+ EL A++ Sbjct: 180 EAGSKPELLLAMSCLSKGS 198 >gi|305677836|pdb|3NZP|A Chain A, Crystal Structure Of The Biosynthetic Arginine Decarboxylase Spea From Campylobacter Jejuni, Northeast Structural Genomics Consortium Target Br53 gi|305677837|pdb|3NZP|B Chain B, Crystal Structure Of The Biosynthetic Arginine Decarboxylase Spea From Campylobacter Jejuni, Northeast Structural Genomics Consortium Target Br53 Length = 619 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 33/120 (27%), Gaps = 20/120 (16%) Query: 3 AFKYFEGSLHAE---NVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDGM--- 51 F G + ++ + + P I+K F+ Sbjct: 13 NFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKE 72 Query: 52 -----DTMVCYALKANSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFS 102 Y LK N +K L LG GL+ S+ EL A A I + Sbjct: 73 FGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAXAYNNEGAPITVN 132 >gi|316969899|gb|EFV53928.1| putative calcium binding EGF domain protein [Trichinella spiralis] Length = 1378 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 22/291 (7%), Positives = 48/291 (16%), Gaps = 19/291 (6%) Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC-----FNVESE 127 G+ D VS L + +R G G + Sbjct: 762 KNGATCDAVSGRCLCASGWRGWHCDRPCPDGFYGKQCAQICDCGFGSQEGNGALSRCDHV 821 Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187 + + P + T + + G + G+ + Sbjct: 822 TGECLCPSGWTGPDCRTPCPPNRWGNGCTETCQCENGGSCDPLTGLCSCPPGWIGKACDQ 881 Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHN-------------IQHI 234 + G++ + + + + Sbjct: 882 ECPAGLHGINCAQHCHCLNNATCDSRTGKCLCSPGWMGAACEFRCPFGYFGPSCNGVCQC 941 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 G P + G A + + Sbjct: 942 QAGAACDHVTGECRCLPGWTGERCDKKCPDGKYGINCSEVCQCEHGASCHHITGHCLCTP 1001 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 + + R + + A GP C Sbjct: 1002 GWRGRRCHRPC-IKGYYGRNCAQRCNCPKQNNCDHITGQCSCPAGYTGPTC 1051 >gi|301613211|ref|XP_002936099.1| PREDICTED: endothelial cells scavenger receptor-like [Xenopus (Silurana) tropicalis] Length = 857 Score = 39.4 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 10/241 (4%), Positives = 26/241 (10%), Gaps = 2/241 (0%) Query: 109 DEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKE 168 + + E+ + + Sbjct: 21 CCPGWKQEGRACTVDTCKTDEVCIRPGVCRCKPGYFGASCNSRCPDQYWGSDCKQSCSCF 80 Query: 169 DKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 P + G+ H + Sbjct: 81 PNGKCDPVSGQCTCYSNRWGPNCQHPCHCSQHGACNPLTGVCHCENGWWTPYCNKQCHCN 140 Query: 229 HNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVT 288 G I + + Sbjct: 141 LQTSRCSQATGQCIC--DTGWWGQKCSVKCNCNNSPCLQINGRCKCQEGWWGVSCEYQCD 198 Query: 289 KVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 + + + N + V +C + Sbjct: 199 CLHGKCSPLNGKCDCHVGYQGASCADPCTPGTYGTNCKNRCGHCKQGQICSPVDGLCLSC 258 Query: 349 D 349 D Sbjct: 259 D 259 >gi|196232223|ref|ZP_03131077.1| alanine racemase domain protein [Chthoniobacter flavus Ellin428] gi|196223591|gb|EDY18107.1| alanine racemase domain protein [Chthoniobacter flavus Ellin428] Length = 366 Score = 39.4 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 20/74 (27%), Gaps = 2/74 (2%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIV 81 V +P +E N G + +K + +++ LG Sbjct: 10 AEVASPALLIFEERVESNLRRMIE-IAGDPARLRPHVKTHKLGPLVERQLALGINKFKCA 68 Query: 82 SEGELRRALAAPVP 95 + E A P Sbjct: 69 TIAEAEMCAQADAP 82 >gi|290993126|ref|XP_002679184.1| predicted protein [Naegleria gruberi] gi|284092800|gb|EFC46440.1| predicted protein [Naegleria gruberi] Length = 437 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 5/44 (11%), Positives = 11/44 (25%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 TP + E+N + +K + + Sbjct: 66 TPCFVVDLERFERNCQNMIKKASDCGISLRPHVKTHKTLEGARL 109 >gi|118104337|ref|XP_424719.2| PREDICTED: similar to MEGF10 protein (KIAA1780) [Gallus gallus] Length = 1278 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 14/276 (5%), Positives = 42/276 (15%), Gaps = 19/276 (6%) Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA----VSLGKKA 144 ++ ++ + + + S + +R Sbjct: 282 NCSSACDSDHWGPHCSSRCQCKNGALCNPITGACHCASGFKGWRCEERCDQGTYGNDCHQ 341 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + + T + F + + G+ H+ + Sbjct: 342 KCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEERCPCQNGGICHHVTGEC 401 Query: 205 DQIESFHKA-------------FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 + G D P Sbjct: 402 ACPPGWMGMVCGQPCPEGRYGNNCSQECQCHNGGICDSATGQCHCSPGYTGERCQDECPV 461 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + N + + + + Sbjct: 462 GTYGVRCAETCQCMNGGKCYHISGACLCEPGYTGEHCETRLCPEGVYGLKCDKKCPCHLH 521 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHAD--IVGPIC 345 + + E + +G + G C Sbjct: 522 NTWSCHPMSGECSCKPGWSGLYCNETCSPGFYGKSC 557 Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 22/262 (8%), Positives = 45/262 (17%), Gaps = 1/262 (0%) Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 EL + ++ + Q + Sbjct: 674 ELPCQDGTYGMDCAERCDCSHADGCHPTTGYCRCLPGWSGIHCDSVCAEGQWGPNCSLSC 733 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + + + + I + + V SG HI Sbjct: 734 YCKNGASCSPDDGICECAPGYRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCHHITGLC 793 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 D + F A + + N I G S P Sbjct: 794 DCLPGFTGALCNEVCPSGRFGKNCIGICTCTNNGTCNPIDRSCQCYPGWIGSDCSQPCPP 853 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + I A + + + + + Sbjct: 854 SHWGPNCIHTCNCHNGAYCSAYDGECKCTPGWTGL-YCTQRCPLGFYGKDCALICQCRNG 912 Query: 325 YIVNPAGDRLHIHADIVGPICE 346 + + +G CE Sbjct: 913 ADCDHISGQCTCRTGFMGKHCE 934 >gi|229591485|ref|YP_002873604.1| putative metal-activated pyridoxal enzyme [Pseudomonas fluorescens SBW25] gi|229363351|emb|CAY50481.1| putative metal-activated pyridoxal enzyme [Pseudomonas fluorescens SBW25] Length = 378 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 23/70 (32%), Gaps = 1/70 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + TP ++ N + + + +K + VI+ G+ G+ + Sbjct: 5 IAALDTPAALIDIPRMQHNIQRMQQRMNTLGVRLRPHIKTSKCLPVIQAQLAAGASGVTV 64 Query: 81 VSEGELRRAL 90 + E + Sbjct: 65 STLKEAQHCF 74 >gi|116627695|ref|YP_820314.1| cation transport ATPase [Streptococcus thermophilus LMD-9] gi|116100972|gb|ABJ66118.1| Cation transport ATPase [Streptococcus thermophilus LMD-9] Length = 732 Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 19/270 (7%), Positives = 69/270 (25%), Gaps = 15/270 (5%) Query: 101 FSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHK 160 S + ++ + V+ + E ++ +++ Sbjct: 1 MSNKTHLSNYEEMMSEHHHNHEMVDMKHENHEMHNMHNMDNMHDMDNMHNMHNMDNMHDM 60 Query: 161 KISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL 220 + + +H + + + ++ L+ + Sbjct: 61 HDMDNMHDMDNMHDMDNMHDMDNMHDMMNHGGHMMHMGDMSKKLKVAIILMIPLLLISPI 120 Query: 221 TQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS--SSDYASLIHQYFGNLQCKIILEPGRF 278 + + + G I ++S + S + I + Sbjct: 121 AGFTILKFPGSEILQLILGTIIFFYSGTPFFRGAKGELKSRKPAMMMLITMGISVAYAYS 180 Query: 279 LVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHA 338 + A + L + T +++ + + + A + + + + H+ + Sbjct: 181 VYATIMSLYGHMGMNFWFELATLIVIMLIGHLIEMKAIMGAGDALKDLASLVPKKAHLKS 240 Query: 339 DIVGPICETGDFIALNRKIALPRPGDLLYI 368 + +++ + GDLL + Sbjct: 241 -------------GKDVELSELKVGDLLLV 257 >gi|123443312|ref|YP_001007286.1| hypothetical protein YE3103 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090273|emb|CAL13139.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 391 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 21/74 (28%), Gaps = 2/74 (2%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLGS-GLDIVSEGELR 87 Y +++N + K N + K L G G+ V E R Sbjct: 31 YVIDVDQVKQNARLLLETATRYGITLYLMSKQFGRNPLLCKLLLECGYQGIVAVDFKEAR 90 Query: 88 RALAAPVPAERIVF 101 + +P + Sbjct: 91 QLYQYNLPVAHVGH 104 >gi|238795513|ref|ZP_04639028.1| hypothetical protein ymoll0001_11030 [Yersinia mollaretii ATCC 43969] gi|238720632|gb|EEQ12433.1| hypothetical protein ymoll0001_11030 [Yersinia mollaretii ATCC 43969] Length = 378 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 20/74 (27%), Gaps = 2/74 (2%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLGS-GLDIVSEGELR 87 Y + +N + K N + K L G G+ V E R Sbjct: 18 YVIDVDQVRQNASLLLETAIRHGMTLYLMSKQFGRNPQLCKLLLECGYQGIVAVDYKEAR 77 Query: 88 RALAAPVPAERIVF 101 + +P + Sbjct: 78 QLYQHNLPVAHVGH 91 >gi|308178610|ref|YP_003918016.1| alanine racemase-like protein [Arthrobacter arilaitensis Re117] gi|307746073|emb|CBT77045.1| alanine racemase-like protein [Arthrobacter arilaitensis Re117] Length = 366 Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 1/60 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG-SGLDIVSEGE 85 TP +EKN ++ + K + Q + + + G +GL + + GE Sbjct: 10 TPQILVDVAKLEKNIDRVAHRVASQGLKLRPHAKTHKMQEIAERQMNAGAAGLTVATVGE 69 >gi|118786046|ref|XP_315098.3| AGAP004993-PA [Anopheles gambiae str. PEST] gi|116127696|gb|EAA10481.4| AGAP004993-PA [Anopheles gambiae str. PEST] Length = 3704 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 16/268 (5%), Positives = 49/268 (18%), Gaps = 6/268 (2%) Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK--TLNQRAVS 139 S ++ V + + +E ++ Sbjct: 265 SIKDISIGGRCVCNG-HANTCNVLDPRSPRRILACQCQHNTCGVQCAECCPGFQQKKWRQ 323 Query: 140 LGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 P + S E + IH G++ + Sbjct: 324 NTNARPFQCEPCNCHGHSDECIYSEEIDEKGLSLDIHGN-YEGGGVCQNCQHNTKGINCN 382 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 + + G + + Y Sbjct: 383 QCEDKFYRPYGRFWNETDVCQPCDCDHFYSTGNCEEETGRCECRAEFEPPLCDACSYGHF 442 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + +C + G + + + P + Sbjct: 443 GYPNCRQCECNLNGTIGYYC--EAVNGTCPCKHNFDGPHCKQCAKEYYGFPDCDPCDCNM 500 Query: 320 YHEINYIVNPAGDRLHIHADIVGPICET 347 + ++ + + + + G +C++ Sbjct: 501 HGSVDSVCDEGSGQCQCRPNFAGRLCDS 528 >gi|171909953|ref|ZP_02925423.1| D-threonine aldolase, metal-activated pyridoxal enzyme [Verrucomicrobium spinosum DSM 4136] Length = 371 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 21/72 (29%), Gaps = 2/72 (2%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + +P IE+N A G + +K + VIK LG Sbjct: 13 IDEIPSPSLLVYPDRIEENLRRMI-AMVGDVQRLRPHMKTHKMPDVIKLHLALGITKFKC 71 Query: 81 VSEGELRRALAA 92 + E A Sbjct: 72 ATIAEAEMTAEA 83 >gi|238783581|ref|ZP_04627602.1| hypothetical protein yberc0001_13640 [Yersinia bercovieri ATCC 43970] gi|238715459|gb|EEQ07450.1| hypothetical protein yberc0001_13640 [Yersinia bercovieri ATCC 43970] Length = 391 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 20/74 (27%), Gaps = 2/74 (2%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLGS-GLDIVSEGELR 87 Y + KN + K N + K L G G+ V E R Sbjct: 31 YVIDVDQVRKNAGLLLETAARHGMTLYLMSKQFGRNPMLCKLLLECGYQGIVAVDFKEAR 90 Query: 88 RALAAPVPAERIVF 101 + +P + Sbjct: 91 QLYQHNLPVAHVGH 104 >gi|257462583|ref|ZP_05626993.1| alanine racemase, biosynthetic [Fusobacterium sp. D12] gi|317060235|ref|ZP_07924720.1| alanine racemase [Fusobacterium sp. D12] gi|313685911|gb|EFS22746.1| alanine racemase [Fusobacterium sp. D12] Length = 354 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 24/74 (32%), Gaps = 7/74 (9%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN----QAVIKTLAHLGSG-LDIVSEGEL 86 T + N VC +KAN+ V K L G + S E Sbjct: 7 IDTEHLRHNIREIQK--RAEGLEVCGVIKANAYGLGVLPVTKILEEEGIHFFAVASLEEA 64 Query: 87 RRALAAPVPAERIV 100 + +A + E ++ Sbjct: 65 KEVRSAGIAGEILI 78 >gi|148273757|ref|YP_001223318.1| putative alanine racemase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831687|emb|CAN02656.1| putative alanine racemase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 566 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 10/66 (15%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKA----NSNQAVIKTLAHLG----SGLDIVS 82 AI N T + TMV A+KA + V + G + LD+ S Sbjct: 19 VVDLDAIRHNVRTLAALAAPARTMV--AVKADAYGHGALQVARAALEAGAESLAVLDVAS 76 Query: 83 EGELRR 88 ELRR Sbjct: 77 AVELRR 82 >gi|148672310|gb|EDL04257.1| NEL-like 2 (chicken) [Mus musculus] Length = 798 Score = 39.0 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 19/251 (7%), Positives = 41/251 (16%) Query: 97 ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA 156 E ++ K ++ +Q K+ + Sbjct: 286 ESESWTDGCKNCTCLNGTIQCETLVCPAPDCPPKSAPAYVDGKCCKECKSTCQFQGRSYF 345 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL 216 + P + S +A Sbjct: 346 EGERNTVYSSSGMCVLYECKDQTMKLVENIGCPPLDCPESHQIALSHSCCKVCKDRAVCS 405 Query: 217 LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPG 276 R + + ID + ++ I + Sbjct: 406 CRAWFSGSPKDNAYCEDIDECAEGRHYCRENTMCVNTPGSFMCICKTGYIRIDDYSCTEH 465 Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI 336 + + + V + + N A + Sbjct: 466 DECLTNQHNCDENALCFNTVGGHNCVCKPGYTGNGTTCKAFCKDGCRNGGACIAANVCAC 525 Query: 337 HADIVGPICET 347 GP CET Sbjct: 526 PQGFTGPSCET 536 >gi|260797818|ref|XP_002593898.1| hypothetical protein BRAFLDRAFT_98194 [Branchiostoma floridae] gi|229279129|gb|EEN49909.1| hypothetical protein BRAFLDRAFT_98194 [Branchiostoma floridae] Length = 2375 Score = 39.0 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 23/269 (8%), Positives = 40/269 (14%), Gaps = 12/269 (4%) Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 G L YC + + Sbjct: 1612 ELCPMQCDNGYIYEACGPVCQETCRALGDTPPWYCERSTCVEGCFCPEGYVDDVYECEED 1671 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQ 206 F+ + D + Sbjct: 1672 EFKCESGACIKNVYRCDGITDCRDLSDEHECPPPACEDNEFTCKNGRCIPDGFVCDGDHD 1731 Query: 207 IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGN 266 + + + I + H D S F Sbjct: 1732 CGFDDNSDEEQCAFNCDTPHEFYCQSGICLPLTHRCDGHDDCGDMSDEYGCICTIHQFTC 1791 Query: 267 LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYI 326 + IL + + K D T + A Sbjct: 1792 FSGECILRSQVYCAFSH-------CYLDKLCDGTPDCPRGEDEGKNCENMTTAIPMTTVS 1844 Query: 327 VNPAGDRLHIHADIVGPICETGDFIALNR 355 V +CETGD + ++ Sbjct: 1845 VTLPTTCAPEEF-----VCETGDCLPADK 1868 >gi|307727882|ref|YP_003911095.1| alanine racemase domain-containing protein [Burkholderia sp. CCGE1003] gi|307588407|gb|ADN61804.1| alanine racemase domain protein [Burkholderia sp. CCGE1003] Length = 376 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + +N + + +K + V++ G+ G+ + + E Sbjct: 8 TPAALIDVARMNRNIERMQQRMNTLGVSFRPHVKTTKCEQVVRAQLAAGARGITVSTLKE 67 Query: 86 LRRALAA 92 + AA Sbjct: 68 AEQFFAA 74 >gi|255322191|ref|ZP_05363337.1| arginine decarboxylase [Campylobacter showae RM3277] gi|255300564|gb|EET79835.1| arginine decarboxylase [Campylobacter showae RM3277] Length = 611 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 80/279 (28%), Gaps = 24/279 (8%) Query: 2 SAFKYFEGSLHAE---NVSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDT 53 + F G + ++ + +++ P I K +F+ Sbjct: 12 NNFIVENGKICVNTGSKPAIIDIVKSIRSEGYRGPLLLRFPHLIHKQISQIYKSFESAKN 71 Query: 54 MV--------CYALKANSNQAVIKTL----AHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y LK N +K L G GL+ S+ EL +A I Sbjct: 72 EFGYKGSFNAVYPLKVNQYPGFVKNLVRHGQKYGYGLEAGSKAELLLVMAYNNEGAPITV 131 Query: 102 SG----VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINAN 157 +G I I + I + K I R+ + + Sbjct: 132 NGFKDKEMINIGFIAAEMGHNITLTIEGLNELEAIIAIAKERFTPKPNIGLRIRLHSSGS 191 Query: 158 THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 S G I ++ + + + HIGSQI +I KA Sbjct: 192 GIWAKSGGINSKFGLTATELIEAVNLLKEANLLDRFNMIHFHIGSQITEIHPLKKALIEA 251 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 ++ +LR G GG +S + SS +Y Sbjct: 252 GNIYAELRKMGAKNLKAINLGGGLAIEYSQFKENSSRNY 290 >gi|310796099|gb|EFQ31560.1| alanine racemase domain-containing protein [Glomerella graminicola M1.001] Length = 401 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 10/75 (13%), Positives = 22/75 (29%), Gaps = 6/75 (8%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 M + +L+ + +P S I+KN + + +K Sbjct: 1 MDY-SLQNHKSLIGSKALD-----LPSPSLVLSLPVIKKNIEKLHQDVEKAGVTLRPHVK 54 Query: 61 ANSNQAVIKTLAHLG 75 + V + + G Sbjct: 55 TLKSLEVTRLMLGNG 69 >gi|163747567|ref|ZP_02154916.1| hypothetical protein OIHEL45_16471 [Oceanibulbus indolifex HEL-45] gi|161379164|gb|EDQ03584.1| hypothetical protein OIHEL45_16471 [Oceanibulbus indolifex HEL-45] Length = 370 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 7/45 (15%), Positives = 17/45 (37%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 TP +++N ++ + + + LK + V + L Sbjct: 9 TPALLLDEARMQRNIARLADHAEKLGVTLRPHLKTAKSVDVARQL 53 >gi|187931379|ref|YP_001891363.1| putative arginine decarboxylase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712288|gb|ACD30585.1| putative arginine decarboxylase [Francisella tularensis subsp. mediasiatica FSC147] Length = 469 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 84/276 (30%), Gaps = 24/276 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGSGLD 79 P Y ++ +F + Y +K N Q +IK + Sbjct: 52 PLVLYFEHILKNQLDKLYTSFGKAIDDFSYTGKYSLAYPIKVNPEQKIIKAIYDYHQHNQ 111 Query: 80 IVSEGEL----RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 + + E+ A+ G Q Sbjct: 112 VSLDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEI 171 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKIS 194 + + + + I +K FG+ + QI+ + K+ Sbjct: 172 NIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQK---FGLSLSQINKCINFLKTNQLQQKLL 228 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP-PSS 253 + HIGSQ+ + + L + +L+S+ N+++ID GGGL + Y RP Sbjct: 229 LLHSHIGSQLKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGGLAVNYDEYDRPSYDF 288 Query: 254 SDYA-------SLIHQYFGNLQCKIILEPGRFLVAD 282 YA +Y+ I+ E GR + A+ Sbjct: 289 DSYAKNIIKNCKYYAEYYNCDMPSIVTESGRAITAE 324 >gi|255946227|ref|XP_002563881.1| Pc20g14030 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588616|emb|CAP86732.1| Pc20g14030 [Penicillium chrysogenum Wisconsin 54-1255] Length = 367 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 20/75 (26%), Gaps = 1/75 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 + TP +E N + + LK + + + G+ G + Sbjct: 10 VDTLDTPSMIADLDLVEANIKKLMDKLLPTGLDIRPHLKTTKSAILADKMVKAGAKGGCV 69 Query: 81 VSEGELRRALAAPVP 95 E AA Sbjct: 70 AKVSEAEVIAAAGFD 84 >gi|311103295|ref|YP_003976148.1| metal-activated pyridoxal enzyme [Achromobacter xylosoxidans A8] gi|310757984|gb|ADP13433.1| metal-activated pyridoxal enzyme [Achromobacter xylosoxidans A8] Length = 379 Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 20/62 (32%), Gaps = 1/62 (1%) Query: 25 VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSE 83 V TP TA E N D + + KA+ + LG+ G+ Sbjct: 24 VDTPSLALDLTAFEANLRAMQAWADRHEVALRPHAKAHKCPQIALRQLALGARGICCQKV 83 Query: 84 GE 85 E Sbjct: 84 SE 85 >gi|329895587|ref|ZP_08271083.1| Biosynthetic arginine decarboxylase [gamma proteobacterium IMCC3088] gi|328922266|gb|EGG29616.1| Biosynthetic arginine decarboxylase [gamma proteobacterium IMCC3088] Length = 679 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 98/292 (33%), Gaps = 29/292 (9%) Query: 34 TTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGS----GLDIV 81 ++ + AF + + +K N V++ +A G+ GL+ Sbjct: 113 ENLLDHRISAINEAFANAIASAGYNNEYRGVFPIKVNQQCHVVEEIADYGARYHHGLEAG 172 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL----KTLNQRA 137 S+ EL AL ++ K + I+L L + N E + +R+ Sbjct: 173 SKAELIIALTQLKDRHSLIICNGYKDQEFIELGLYARKMGINCFFVLETLGELDIIIERS 232 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 +LG + I R+ H +G + + + + + + Sbjct: 233 EALGIEPAIGARIRLSSMVEGHWNEDSGDRSIFGLSTDSLLCVVDKLRAHNMLHCMQMLH 292 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS-SDY 256 H+GSQI I + L + G + +ID+GGGL + Y + +Y Sbjct: 293 CHLGSQIPNIRNIRSGVLEACRYYTGLVAEGAAMGYIDLGGGLAVDYEGRRTNETHSMNY 352 Query: 257 ASLIHQYFGN------------LQCKIILEPGRFLVADVGILVTKVISIKKS 296 + +I E GR LVA +L+ ++ ++ Sbjct: 353 GLNEYCANIIETLQESLDSEDVPHPVVITESGRALVAYSSMLLFNILDVRDH 404 >gi|160899796|ref|YP_001565378.1| alanine racemase domain-containing protein [Delftia acidovorans SPH-1] gi|160365380|gb|ABX36993.1| alanine racemase domain protein [Delftia acidovorans SPH-1] Length = 380 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 20/64 (31%), Gaps = 1/64 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 V TP T + N T + D + KA+ + LG+ G+ Sbjct: 23 DRVDTPSLALDLTVFDANLRTMQDWADRHGVALRPHAKAHKCPQIALRQLALGARGICCQ 82 Query: 82 SEGE 85 E Sbjct: 83 KVSE 86 >gi|198431367|ref|XP_002126899.1| PREDICTED: similar to alpha 3,4,5-laminin [Ciona intestinalis] Length = 3766 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 57/233 (24%), Gaps = 8/233 (3%) Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 + + T+ +R K I R + +A+T + + K + Sbjct: 248 HLMAISEQDPTVTRRYYYSIKDISIGGRCVCNGHADTCLPDKNDQYKLKCECRHNTCGDS 307 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 K + + + + H + R + GG Sbjct: 308 CERCCEGYVQKAWRAAVPESTNQCEACNCHGHSSECQYDEDVARRRLSIDLAGNYEGGGV 367 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEP------GRFLVADVGILVTKVISIKK 295 + + + + + ++ + I + V + + Sbjct: 368 CLNCLHNTAGINCEQCASGYWRPSSVDPRSIDGCRPCDCDSTYTVGSCEPNTGRCYCKVQ 427 Query: 296 SADKTFVILDVAMNDF--MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 A DF RP +N + P GD + G C+ Sbjct: 428 YAGDRCDRCAPGYYDFPECRPCDCYYNGTLNDVCLPLGDACPCKYNFAGKYCD 480 >gi|308736974|ref|NP_001184180.1| vitellogenin receptor [Bombyx mori] gi|302138009|gb|ADK94452.1| vitellogenin receptor [Bombyx mori] Length = 1809 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 27/226 (11%), Positives = 46/226 (20%), Gaps = 7/226 (3%) Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHS 180 E E + + + D + T + K D Sbjct: 23 MQVYEKECLGEDVFPCMSGGCIQQSQYCDGKVDCDDGTDENYCLDHKPDAQFCNETHQFM 82 Query: 181 LYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGL 240 +P I D+ D++ + G Sbjct: 83 CRDSKKCIPNHWICNNDIDCDDGSDELNCTLVPVATGKCKGFLCGDGKCISSLWLCDGSY 142 Query: 241 GIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKT 300 SD P + ++ L H C+ L R + Sbjct: 143 DCKDKSDENSPENCRHSLLSHSMLSGSDCQEWLGGRRQYKCTDSSFCLPSEMMCDGMQDC 202 Query: 301 FVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 D T+ + + + DR GP CE Sbjct: 203 KDGSDERPFCANWHTMCANHTCLGDKASCVPDR-------AGPTCE 241 >gi|194291538|ref|YP_002007445.1| alanine racemase [Cupriavidus taiwanensis LMG 19424] gi|193225442|emb|CAQ71388.1| Alanine racemase [Cupriavidus taiwanensis LMG 19424] Length = 384 Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 1/67 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 V TP A + N D + KA+ + A+ + G+ G+ Sbjct: 23 VEDVGTPALLVDLDAFDHNVAGMQALADAAAVALRPHAKAHKSVAIAQRQIAAGAVGVCC 82 Query: 81 VSEGELR 87 E Sbjct: 83 QKLSEAY 89 >gi|261855604|ref|YP_003262887.1| alanine racemase [Halothiobacillus neapolitanus c2] gi|261836073|gb|ACX95840.1| alanine racemase [Halothiobacillus neapolitanus c2] Length = 378 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 19/65 (29%), Gaps = 6/65 (9%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKA----NSNQAVIKTLAHLGSGLDIVSEGELR 87 A+ N G + A+KA + V + L G + + GE Sbjct: 25 IDLAALRHNAAVARQVAKGR--KLLAAVKADAYGHGMATVARALRDRVDGFMVATLGEGE 82 Query: 88 RALAA 92 A Sbjct: 83 ALRLA 87 >gi|148907442|gb|ABR16854.1| unknown [Picea sitchensis] Length = 43 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 1/38 (2%) Query: 376 AVQSGTYNSRLLIPEIMV-NGSQFHIIRPRMTFQELIE 412 + YN + PE V + IR F++ + Sbjct: 1 MSMASCYNLKSRPPEYWVADDGSVKKIRHVEMFEDHLR 38 >gi|254227886|ref|ZP_04921316.1| arginine decarboxylase [Vibrio sp. Ex25] gi|262396126|ref|YP_003287979.1| biosynthetic arginine decarboxylase [Vibrio sp. Ex25] gi|151939382|gb|EDN58210.1| arginine decarboxylase [Vibrio sp. Ex25] gi|262339720|gb|ACY53514.1| biosynthetic arginine decarboxylase [Vibrio sp. Ex25] Length = 640 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 110/335 (32%), Gaps = 33/335 (9%) Query: 18 LEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVI 68 + +L A + P + + +AF+ ++ Y +K N + V+ Sbjct: 54 VNELEAKQLNLPVLVRFPQIVHQRVHGICHAFNQAIEEYQYPNKYLLVYPIKVNQQREVV 113 Query: 69 KTLAH-------LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID----LALQS 117 + GL+ S+ EL LA ++ K + + Sbjct: 114 DEILASQAQLETKQLGLEAGSKPELLAVLALAQQGSSVIVCNGYKDREYVRLALIGEKLG 173 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 +E SEL + + A SLG K + R+ + S G+K Sbjct: 174 HKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQV 233 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + + V H+GSQ+ I +LR+ G NI++ DVG Sbjct: 234 LSVIERLKREGSLDAMQLVHFHLGSQMANIRDVRNGVNESARFYCELRALGANIEYFDVG 293 Query: 238 GGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVG 284 GGL + Y ++YA I Q + II E GR L A Sbjct: 294 GGLAVDYDGTRSQSSNSMNYGLAEYARNIVNTVGDVCQQYEQPMPVIISESGRSLTAHHA 353 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 +L++ VI + + L ++ + Sbjct: 354 VLISNVIGTETYQPEEVYELGADAPLLLQNMWRNW 388 >gi|320528222|ref|ZP_08029386.1| hypothetical protein HMPREF9430_01511 [Solobacterium moorei F0204] gi|320131395|gb|EFW23961.1| hypothetical protein HMPREF9430_01511 [Solobacterium moorei F0204] Length = 385 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 41/128 (32%), Gaps = 3/128 (2%) Query: 30 YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKA-NSNQAVIKTLAHLGS-GLDIVSEGELR 87 Y +N + + + Y LK N + K L +G G +V E Sbjct: 31 YVVDVDQFLENAKAILQKANEQNIELYYMLKQIGRNPYLAKELEKIGYKGAVVVDFKEAE 90 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + + V ++ + G V S +L +N+ A +G + Sbjct: 91 VMMKNQLHIAHA-GHLVQIPSMMVNRLVAYGCDYVTVYSYEKLVEVNEAAKKIGMIQKVC 149 Query: 148 FRVNPDIN 155 RV + + Sbjct: 150 VRVIGEND 157 >gi|296327458|ref|ZP_06870004.1| serine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155284|gb|EFG96055.1| serine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 369 Score = 38.6 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 24/70 (34%), Gaps = 1/70 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 ++TP + A++ N + + +K + + +++ G+ G Sbjct: 4 KELKTPTILLNIEALKNNIKKYQKLCTEYKKELWPMIKTHKSMEIVEMQIKEGATGALCG 63 Query: 82 SEGELRRALA 91 + E+ Sbjct: 64 TLDEVEACCQ 73 >gi|332245559|ref|XP_003271926.1| PREDICTED: hypothetical protein LOC100602315 [Nomascus leucogenys] Length = 261 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 24/258 (9%), Positives = 53/258 (20%), Gaps = 6/258 (2%) Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S GE + + V+ + K+ + G V S + + + Sbjct: 2 SRGEGWDPPDSDPDPDPAVWVTLDKSPFWAWVFASWGPSFPAVILYSPICVYIYTHICIH 61 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 I I +T+ I I HI Sbjct: 62 TYTHICIHTYTHICIHTYTHICIHTYTHICIHTYTHICIYTYTYMYTHMYIHIYTYTHIC 121 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + + + + HI + H H Sbjct: 122 IYTYIHIHIYVYTHIHTYVYTHIHIYTYMYIHI------YVYTHIHIYTYMCIHIYVYTH 175 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 + I V + T + + + ++ + +Y + Sbjct: 176 IHIYVYTHIHIYTYTHICTYICVYTYICVYTYTHIYVYTRIHIYMCIHVHIHTYVYVYIY 235 Query: 322 EINYIVNPAGDRLHIHAD 339 + + A Sbjct: 236 VCVCVCEEDTEGDKKTAS 253 >gi|321460304|gb|EFX71347.1| hypothetical protein DAPPUDRAFT_129702 [Daphnia pulex] Length = 914 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 20/273 (7%), Positives = 37/273 (13%), Gaps = 15/273 (5%) Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G S+ A+ + V K Sbjct: 358 EGGCMNKCSSKMPCGHICPKMCHADDRDHALVKCQELCTRFCPVGHPC---------PKK 408 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 K+ D+ +T + KK +P Sbjct: 409 CFAVCNPCVKRMIPECGHEVDLPCSTEPTRALCKKMCASELP-CGHLCKKKCCEPCNQAD 467 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 I + + + ++ G H Sbjct: 468 CVEPLTTIKVNLCGHHVTLSCKD-----FHEATLDCEHLCKGTCGECFNGRVHRACDEKC 522 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 K + Sbjct: 523 GRSLVCGHICNVNCGISCPPCGLKCQYSCSHSKCGHKCCEPCTPCKEKCPWSCQHKTCTK 582 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 + + H A + G IC Sbjct: 583 KCGDPCNRSRCDEPCKKTLPCGHFCAGLCGEIC 615 >gi|223040993|ref|ZP_03611253.1| arginine decarboxylase [Campylobacter rectus RM3267] gi|222877749|gb|EEF12870.1| arginine decarboxylase [Campylobacter rectus RM3267] Length = 611 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 80/279 (28%), Gaps = 24/279 (8%) Query: 2 SAFKYFEGSLHAE---NVSLEKLAHVVQT-----PFYCYSTTAIEKNYLTFSNAFDGMDT 53 + F G + ++ + +++ P I K +F+ Sbjct: 12 NNFIVENGKICVNTGSKPAIIDIVKSIRSEGYRGPLLLRFPHLIHKQISQIYKSFESAKN 71 Query: 54 MV--------CYALKANSNQAVIKTL----AHLGSGLDIVSEGELRRALAAPVPAERIVF 101 Y LK N +K L G GL+ S+ EL +A I Sbjct: 72 EFGYKGSFNAVYPLKVNQYPGFVKNLVRHGQKYGYGLEAGSKAELLLVMAYNNEGAPITV 131 Query: 102 SG----VGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINAN 157 +G I I + I + K I R+ + + Sbjct: 132 NGFKDKEMINIGFIAAEMGHNITLTIEGLNELEAIIAIAKERFAPKPNIGLRIRLHSSGS 191 Query: 158 THKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLL 217 S G I ++ + + + HIGSQI +I KA Sbjct: 192 GVWAKSGGINSKFGLTATELIEAVNLLKEANLLDRFNMIHFHIGSQITEIHPLKKALIEA 251 Query: 218 RDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 ++ +LR G GG +S + SS +Y Sbjct: 252 GNIYAELRKMGAKNLKAINLGGGLAIEYSQFKENSSRNY 290 >gi|209574004|gb|ACI62940.1| arginine decarboxylase SpeA [Acidithiobacillus thiooxidans] Length = 634 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 101/315 (32%), Gaps = 32/315 (10%) Query: 16 VSLEKLAHVVQ-----TPFYCYSTTAIEKNYLTFSNAFD--------GMDTMVCYALKAN 62 + L +A + P + AF D Y +K N Sbjct: 49 IGLADVASELGEHSLGLPCLLRFPQILGHRVEKLRGAFTTAMQDTRYQGDYTPVYPIKVN 108 Query: 63 SNQAVIKTLAHLGS---GLDIVSEGELRRALAAPVPAERIVFS---GVGKTIDEIDLALQ 116 + V++ + GS GL+ S+ EL L ++ + + Sbjct: 109 QQRRVVEEILRAGSGNVGLEAGSKPELLAVLGLMPVGGTVICNGYKDREYIRLALSGEKL 168 Query: 117 SGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH 176 VE SEL + + +G + I R + + G+K H Sbjct: 169 GLRVYLVVEKISELPLILSESRDIGVQPRIGVRARLASAGAGKWQNTGGEKSKFGLSTAH 228 Query: 177 QIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV 236 + L + + H+GSQI I+ + L +LR G ++ +DV Sbjct: 229 ILDLLEHLRRENALQSLQLLHFHLGSQIPNIQFIKGGMRECARLYAELRRLGAALEVVDV 288 Query: 237 GGGLGIAYHSDHRPPSSSDYASLIHQYF-------------GNLQCKIILEPGRFLVADV 283 GGGLG+ Y H S + + ++ E GR L A Sbjct: 289 GGGLGVDYEGTHSRAYCSTNYHVSDYAHAIVSALAEVSRQENLPEPHVVSESGRALTAHH 348 Query: 284 GILVTKVISIKKSAD 298 IL+T V ++ +A Sbjct: 349 AILLTNVTDVEMAAG 363 >gi|126337493|ref|XP_001376533.1| PREDICTED: similar to pol polyprotein [Monodelphis domestica] Length = 788 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 20/276 (7%), Positives = 36/276 (13%), Gaps = 11/276 (3%) Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E + E G G C + + K + + + Sbjct: 384 ECHEWVCEAYDGETCAGHGKCDCGKCKCDEGWYGEACQYPTNCNLTKKKSNQMCKNSQDT 443 Query: 145 PI----AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 N+ K + Sbjct: 444 ICSNAGICHCGRCKCDNSEGNGLVYGKFCECDDRECIDDETEEMCGGHGKCYCGNCYCEA 503 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 G D+ E G + D + Sbjct: 504 GWHGDKCEFQCDITPWESKRRCTSPDGKICSNRGTCVCGECSCHDVDPTGDWGDIHGDTC 563 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM-------NDFMR 313 N + F + + K Sbjct: 564 ECDERNCRSVYDRYSDDFCSGHGQCNCGRCDCKVGWSGKKCEHPLSCPLSAEDSIKKCQG 623 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + G CE D Sbjct: 624 SANLPCSGRGKCECGQCTCYPPGDSRVYGKTCECDD 659 >gi|224093686|ref|XP_002194312.1| PREDICTED: nel-like 2 [Taeniopygia guttata] Length = 1178 Score = 38.6 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 21/230 (9%), Positives = 44/230 (19%), Gaps = 1/230 (0%) Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 E +T + + + + + Q Sbjct: 688 CCKECQSVCVFEGRTYFEGQRETVYSSSGDCVLFECKDHKMQRIPKDICPALNCPES-QQ 746 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 I ++ G + +A RD + LR + + ID Sbjct: 747 IPLSHSCCKVCKGHDFCTEGHNCMEHSVCRNLEDRAVCSCRDGFRALREDNAYCEDIDEC 806 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + ++ + + V + + Sbjct: 807 AEGRHYCRENTMCVNTPGSFMCVCKTGYIRIDDYSCTEHDECVTNQHNCDENALCFNTVG 866 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 V + + N A + GP CET Sbjct: 867 GHNCVCKPGYTGNGTICKAFCKDGCRNGGACIASNVCACPQGFTGPSCET 916 >gi|73662116|ref|YP_300897.1| alanine racemase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123643046|sp|Q49Z24|ALR_STAS1 RecName: Full=Alanine racemase gi|72494631|dbj|BAE17952.1| alanine racemase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 382 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 39/348 (11%), Positives = 85/348 (24%), Gaps = 31/348 (8%) Query: 30 YC-YSTTAIEKNYLTFSNAFDGMDTMVCYALKANS----NQAVIKTLAHLGS-GLDIVSE 83 Y AI N+ F + V +KAN + V + L G+ + + Sbjct: 10 YVNVDLNAIVANFQVFQKL--HPNKTVMPVVKANGYGLGSIKVARQLMDNGAEFFAVATL 67 Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 E + A+ +V + + + I + E + Sbjct: 68 DEAIELRMHGIDAKILVLGVIPTEHINKAIQHRVAITVPSKSWLVEAVKEIPESNEKDLW 127 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + + K ++ L S L + Sbjct: 128 IHVKLDTGMG------------RLGMKTAEEYKEVIELINGHSHLIFEGVFTHFACADEP 175 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 D + F+ + + + G L + Sbjct: 176 GDSMNRQQTMFEEIVGQADKPDYIHSQ----NSAGALMKDTQFCNAVRVGISLYGYYPSA 231 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + K+ L+P ++++ S + + + D Y + Sbjct: 232 YVKSNVKVHLKPSAQWISEIVQTKLLHAGESVSYGSVYTADEKTKIGVIPVGYADGYPRM 291 Query: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA-LPRPGDLLYIEK 370 + + +++G +C I KI + GD + I Sbjct: 292 MKGFSVNVNGKQ--CEVIGKVCMDQTII----KIPDEIQVGDKVIIMD 333 >gi|330999385|ref|ZP_08323102.1| hypothetical protein HMPREF9439_00724 [Parasutterella excrementihominis YIT 11859] gi|329575243|gb|EGG56794.1| hypothetical protein HMPREF9439_00724 [Parasutterella excrementihominis YIT 11859] Length = 381 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 14/48 (29%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT 70 VQTP +N + ++ + LK +T Sbjct: 4 KTVQTPALLLDLDKFTRNCNWMKEKAERLNVALRPHLKTGKCIEFART 51 >gi|159109356|ref|XP_001704943.1| High cysteine protein [Giardia lamblia ATCC 50803] gi|157433019|gb|EDO77269.1| High cysteine protein [Giardia lamblia ATCC 50803] Length = 533 Score = 38.6 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 20/263 (7%), Positives = 51/263 (19%), Gaps = 6/263 (2%) Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E + A + R V ++ + G++ + S Sbjct: 48 EGKNLCHAELIQTRFSTHLVYCSMGGECVETGHGLFECSCRSGFSGPFCEAFTCKSDSVC 107 Query: 145 PIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQI 204 + D + +T++ + P + G + + Sbjct: 108 HGRGQCILD-DDHTYRGHCNCFHGYSGRDCYYDTCGRENITRNNPYLCFGGGECTVLPGT 166 Query: 205 DQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 + + + + + D G + +A Sbjct: 167 PPRLGQIFGCRCRPGFSGEACDSFICAGNRDCANGGTCNTDTGICTCPHLSFAGSDCGIA 226 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + ++ + N E Sbjct: 227 NCGYWGGTEDSLCSGNGQCIGMLGYRCLCNDGYTGEDCSSPLCTNGGECMNNGTCISEGE 286 Query: 325 YIVNPAGDRLHIHADIVGPICET 347 A + GP+CE+ Sbjct: 287 EAGMCACPGAYS-----GPLCES 304 >gi|320583961|gb|EFW98174.1| amino acid aldolase, putative [Pichia angusta DL-1] Length = 414 Score = 38.3 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 6/63 (9%) Query: 15 NVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 VS+E L TP + ++N + +K + T L Sbjct: 22 GVSIESL----PTPAFVVDRATFQRNSDKMLENAHNLGADFRAHVKTHKTLE--GTALQL 75 Query: 75 GSG 77 G+G Sbjct: 76 GTG 78 >gi|56707576|ref|YP_169472.1| putative arginine decarboxylase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670047|ref|YP_666604.1| putative arginine decarboxylase [Francisella tularensis subsp. tularensis FSC198] gi|224456646|ref|ZP_03665119.1| putative arginine decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370096|ref|ZP_04986102.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874397|ref|ZP_05247107.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604068|emb|CAG45065.1| putative arginine decarboxylase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320380|emb|CAL08448.1| putative arginine decarboxylase [Francisella tularensis subsp. tularensis FSC198] gi|151568340|gb|EDN33994.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254840396|gb|EET18832.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282158733|gb|ADA78124.1| putative arginine decarboxylase [Francisella tularensis subsp. tularensis NE061598] Length = 469 Score = 38.3 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 84/276 (30%), Gaps = 24/276 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGSGLD 79 P Y ++ +F + Y +K N Q +IK + Sbjct: 52 PLVLYFEHILKNQLDKLYTSFGKAIDDFSYTCKYSLAYPIKVNPEQKIIKAIYDYHQHNQ 111 Query: 80 IVSEGEL----RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 + + E+ A+ G Q Sbjct: 112 VSLDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEI 171 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKIS 194 + + + + I +K FG+ + QI+ + K+ Sbjct: 172 NIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQK---FGLSLSQINECINFLKTNQLQQKLL 228 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP-PSS 253 + HIGSQI + + L + +L+S+ N+++ID GGGL + Y RP Sbjct: 229 LLHSHIGSQIKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGGLAVNYDEYDRPSYDF 288 Query: 254 SDYA-------SLIHQYFGNLQCKIILEPGRFLVAD 282 YA +Y+ I+ E GR + A+ Sbjct: 289 DSYAKNIIKNCKYYAEYYNCDMPSIVTESGRAITAE 324 >gi|296158028|ref|ZP_06840861.1| alanine racemase domain protein [Burkholderia sp. Ch1-1] gi|295891796|gb|EFG71581.1| alanine racemase domain protein [Burkholderia sp. Ch1-1] Length = 379 Score = 38.3 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 19/60 (31%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 ++TP ++KN + + +K V++ G+ VS Sbjct: 4 DQIETPAALIDIARMQKNIARMQGHMNALGVAFRPHVKTTKCIDVVRAQIAAGARGITVS 63 >gi|167381823|ref|XP_001735869.1| protein serine/threonine kinase [Entamoeba dispar SAW760] gi|165901968|gb|EDR27922.1| protein serine/threonine kinase, putative [Entamoeba dispar SAW760] Length = 1695 Score = 38.3 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 17/210 (8%), Positives = 36/210 (17%), Gaps = 6/210 (2%) Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + N + K + K Y G + Sbjct: 22 YDECPYCLWGLCYSCTHGCNYGSWKDNTFCSYCYKCKRGCEACDEEYHCTKCNSGYWLRK 81 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + + + + N G D + Sbjct: 82 YSFEVSLCEKCPTGCFECSSPTQCSSCSKGYYLDNGMCYQCPIGCSSCSGPDSCITCERN 141 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 Y +++ + + V + N+ R Sbjct: 142 YGIVVYSGYSWCSPCTTIRCSSCQVGTYLSNGLCSACP------NECMTCNTFNECTRCK 195 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 + + DI G IC Sbjct: 196 DGYYLENGKCLHCANKLKGCTSCDITGSIC 225 >gi|332799962|ref|YP_004461461.1| alanine racemase domain-containing protein [Tepidanaerobacter sp. Re1] gi|332697697|gb|AEE92154.1| alanine racemase domain protein [Tepidanaerobacter sp. Re1] Length = 386 Score = 38.3 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 19/68 (27%), Gaps = 11/68 (16%) Query: 18 LEKLAHVV--------QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVI 68 L +A T Y + KN A D + + K N + Sbjct: 13 LIDIAAKFHKAGLIEPNT--YVIDLDVVSKNAELIFEAGKKFDIDLYFMTKQFGRNPVIA 70 Query: 69 KTLAHLGS 76 K + + G Sbjct: 71 KAIMNAGI 78 >gi|212702875|ref|ZP_03311003.1| hypothetical protein DESPIG_00908 [Desulfovibrio piger ATCC 29098] gi|212673737|gb|EEB34220.1| hypothetical protein DESPIG_00908 [Desulfovibrio piger ATCC 29098] Length = 371 Score = 38.3 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 8/64 (12%), Positives = 17/64 (26%), Gaps = 1/64 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSG-LDIVSEGE 85 TP ++ N + + LK N + + +G + + E Sbjct: 9 TPCLLLEDEKLQANMDRLARRLHERGVSLRPHLKTCKNIEIARRCMESPTGPATVSTLAE 68 Query: 86 LRRA 89 Sbjct: 69 AEYF 72 >gi|124265522|ref|YP_001019526.1| low-specificity D-threonine aldolase [Methylibium petroleiphilum PM1] gi|124258297|gb|ABM93291.1| low-specificity D-threonine aldolase [Methylibium petroleiphilum PM1] Length = 372 Score = 38.3 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 20/65 (30%), Gaps = 1/65 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDI 80 + +P A E+N + K + A+ + +A G+ + Sbjct: 12 VDAIDSPALVVEIDAFERNLAAMDAFARSHGVRLRPHAKTHKCSAIALHQVARGAVGVCV 71 Query: 81 VSEGE 85 GE Sbjct: 72 QKVGE 76 >gi|224060905|ref|XP_002194215.1| PREDICTED: similar to multiple EGF-like-domains 6 [Taeniopygia guttata] Length = 1575 Score = 38.3 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 18/276 (6%), Positives = 37/276 (13%), Gaps = 3/276 (1%) Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG--IYCFNVESESELKTLNQRA 137 S R P C + Sbjct: 1151 CQSGWRGRHCDKPCPPGRYGAGCAQRCRCPATRPCHHLTGACRCPPGLTGHGCHKTCPVG 1210 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV- 196 + + + + + ++ K Sbjct: 1211 TYGQDCQGVCQCSAENQECHPVTGHCSCSPGYHGAHCHLRCPEGTYGSNCQNPCKCMNGG 1270 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDY 256 S + + G PP + Sbjct: 1271 HCDPASGTCDCAPGFIGANCSKTCPESWYGKDCAHLCACGKGQCDPRTGECSCPPGHTGP 1330 Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTL 316 A G L + ++ + + Sbjct: 1331 ACQQVCPQGQYGPNCHLRCTCQNGGICDHVDGNCTCGLGWTGRSCEEAECLPGKYGAGCS 1390 Query: 317 YDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 D + N + G CE G + Sbjct: 1391 LDCSCQHNGTCDRFTGCCRCPEGFYGHSCEHGCPLG 1426 >gi|259417560|ref|ZP_05741479.1| alanine racemase domain protein [Silicibacter sp. TrichCH4B] gi|259346466|gb|EEW58280.1| alanine racemase domain protein [Silicibacter sp. TrichCH4B] Length = 351 Score = 38.3 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 18/64 (28%), Gaps = 1/64 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP E N F + D + +K + + + G+ G+ E Sbjct: 7 TPAVLVDLNIAEANVRAFQDYCDSHGLQLRPHIKTHKLPRLAEYQIEQGAIGITCQKITE 66 Query: 86 LRRA 89 Sbjct: 67 AEAM 70 >gi|259047269|ref|ZP_05737670.1| alanine racemase [Granulicatella adiacens ATCC 49175] gi|259036045|gb|EEW37300.1| alanine racemase [Granulicatella adiacens ATCC 49175] Length = 371 Score = 38.3 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 8/68 (11%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYA-LKANS----NQAVIKTLAHLGS-GLDIVSEG 84 + I++N + + YA +KAN+ V K G G + + Sbjct: 12 VVDLSIIKQNISKLKSKL--NPSKQVYAVVKANAYGHGMIPVAKAALEAGVQGFCVANVD 69 Query: 85 ELRRALAA 92 E A Sbjct: 70 EALALREA 77 >gi|302141705|emb|CBI18908.3| unnamed protein product [Vitis vinifera] Length = 230 Score = 38.3 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 7/49 (14%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS 76 PFY + +S A YA+KA V T + LG Sbjct: 47 PFYVLDLGVVVSLMEKWSRALPL--VRPFYAVKA-----VFDTASRLGL 88 >gi|330960246|gb|EGH60506.1| hypothetical protein PMA4326_16961 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 367 Score = 38.3 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 7/61 (11%), Positives = 21/61 (34%), Gaps = 1/61 (1%) Query: 31 CYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGELRRA 89 +++N + + + +K + + VI+ G+ G+ + + E Sbjct: 3 LLDVPRMQRNIRRMQQRMNELGVRLRPHVKTSKSLPVIQAQIAAGATGVTVSTLKEAEHC 62 Query: 90 L 90 Sbjct: 63 F 63 >gi|291542251|emb|CBL15361.1| alanine racemase [Ruminococcus bromii L2-63] Length = 392 Score = 38.3 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 98/349 (28%), Gaps = 21/349 (6%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKA----NSNQAVIKTLAHLGSGLDIVSEGELR 87 S AIE NY N DT VC +KA + + + LG+ VS Sbjct: 11 ISLNAIEHNYNVIRNKVAD-DTKVCCVIKADGYGHGAVELSQIYEKLGADFFAVS----- 64 Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 + + + + ++ + +++ + + Sbjct: 65 -NIDEGIEIRKSGSKLPIVILGYTPVSEAENLAEYDISQAVFSLEYAKELSEKCVEEDCI 123 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 +++ +++ + ++ + I + A LP +++ G+ H + Sbjct: 124 CKMHIKVDSGMSRIGFMCQEFPRDEYSIEE----ICEACCLPNLEVEGLFTHFCVSDEDA 179 Query: 208 ESFHKAFKLLRDLTQQL---RSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYF 264 E K + + G +I + I + + L Sbjct: 180 EGREFTNKQYENFIHVRDSLKKRGVDISVVHCSNSGAIEDYPETCCDMVRAGIILYGLAP 239 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 + + + V V +V + D M P Y Sbjct: 240 SSKLADRLDLVPAMTLKTVVAFVKEVQKGATISYGRTFTADRKMKIATVPIGYADGFIRQ 299 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNR-KIALPRPGDLLYIEKTG 372 + A IVG IC D L+ I + GD + + TG Sbjct: 300 NAKDGYMMVNGKKAKIVGRIC--MDQTMLDVTDIEDVKTGDEVVVFGTG 346 >gi|293606155|ref|ZP_06688519.1| alanine racemase domain protein [Achromobacter piechaudii ATCC 43553] gi|292815415|gb|EFF74532.1| alanine racemase domain protein [Achromobacter piechaudii ATCC 43553] Length = 384 Score = 38.3 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 16/56 (28%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 TP + + +N + LK + V + + G VS Sbjct: 15 TPCLLLDESRMMRNIQRLGALMAKHGVQLRPHLKTPKSVEVARRVMSSPQGPAAVS 70 >gi|115901570|ref|XP_783551.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115959369|ref|XP_001179820.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 10045 Score = 38.3 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 27/280 (9%), Positives = 44/280 (15%), Gaps = 16/280 (5%) Query: 99 IVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANT 158 +G SE T P A T Sbjct: 3409 PCTTGHYCPGQTTSPLPCEAGTYTTETHRSECDTCPAGFFCTTGYEPEECPHGFYCPAGT 3468 Query: 159 HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLR 218 + + S M + Sbjct: 3469 GYDWQPCPTGSFSNMAGLANETQCTLCSPGKFCSELNATMVTADCEAGYFCTEGSDTATP 3528 Query: 219 DLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRF 278 ++T + + G + + + + Sbjct: 3529 EVTFKGVAGVCPEGSYCPEGSDTPTPCPRGTFGNVTKLTNSSECTQCLYSQYCEVVGLTA 3588 Query: 279 LVADVGILVTKVISIKKSADKTFVILDVAM---NDFMRPTLYDAYHEINYIVNPAGDRLH 335 D + K + T + T Y E N G Sbjct: 3589 PTGDCYAGFYCLRGAKDPNNPTVDSTGGPCPVGHYCPNGTSYPLDCEAGTYNNQTGQSEC 3648 Query: 336 IHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYG 375 G CE+GD + TG Y Sbjct: 3649 DPCP-AGYYCESGDVHYSDTPCP------------TGHYC 3675 >gi|254501148|ref|ZP_05113299.1| Alanine racemase, N-terminal domain family [Labrenzia alexandrii DFL-11] gi|222437219|gb|EEE43898.1| Alanine racemase, N-terminal domain family [Labrenzia alexandrii DFL-11] Length = 351 Score = 38.3 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 19/68 (27%), Gaps = 1/68 (1%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIV 81 +QTP E N + + +K + + K + G+ G+ Sbjct: 4 EDIQTPAVLVDLDIAEANIEAYQAYCTKHGLALRPHIKTHKLPFLAKRQLNAGAIGITCQ 63 Query: 82 SEGELRRA 89 E Sbjct: 64 KISEAEAM 71 >gi|319784209|ref|YP_004143685.1| alanine racemase domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170097|gb|ADV13635.1| alanine racemase domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 353 Score = 38.3 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 18/67 (26%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP T E N D + +K + K G+ G+ GE Sbjct: 10 TPSILIDATRAEANIARAQAHADKNGLKLRPHIKTHKLPYWAKKQVAAGAVGITCQKIGE 69 Query: 86 LRRALAA 92 A Sbjct: 70 AEVMADA 76 >gi|52081594|ref|YP_080385.1| putative alanine racemase [Bacillus licheniformis ATCC 14580] gi|52786974|ref|YP_092803.1| YncD [Bacillus licheniformis ATCC 14580] gi|319647506|ref|ZP_08001726.1| alanine racemase [Bacillus sp. BT1B_CT2] gi|52004805|gb|AAU24747.1| putative alanine racemase [Bacillus licheniformis ATCC 14580] gi|52349476|gb|AAU42110.1| YncD [Bacillus licheniformis ATCC 14580] gi|317390354|gb|EFV71161.1| alanine racemase [Bacillus sp. BT1B_CT2] Length = 393 Score = 38.3 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 9/131 (6%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANS----NQAVIKTLAHLGSG-LDIVSEGEL 86 + AI+KN F + + +KAN+ + V + G+ L + S E Sbjct: 12 VNLDAIKKNLRAFRRHIPK-KSKIMAVVKANAYGHGSVEVARHALEHGASELAVASVEEA 70 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A + A +V + + A + F V+ E N+ + + Sbjct: 71 VVLRKAGIKAPILVLGFTPLSCVKEAAAWNISLSAFQVDWIKE---ANEILENEADPNRL 127 Query: 147 AFRVNPDINAN 157 A +N D Sbjct: 128 AVHINVDTGMG 138 >gi|121603426|ref|YP_980755.1| putative threonine aldolase [Polaromonas naphthalenivorans CJ2] gi|120592395|gb|ABM35834.1| putative threonine aldolase [Polaromonas naphthalenivorans CJ2] Length = 396 Score = 38.3 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 26/90 (28%), Gaps = 7/90 (7%) Query: 1 MSAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALK 60 MS L + + TP A+++N + ++ K Sbjct: 1 MSNLPARLSELI--GKPVHDI----DTPALVIDMDALKRNLVRMADFAKKHHVRWRPHAK 54 Query: 61 ANSNQAVIKTLAHLG-SGLDIVSEGELRRA 89 + + + K G +G+ + E Sbjct: 55 LHKSTVLAKMQIKAGAAGVCVQKTAEAEVM 84 >gi|221127025|ref|XP_002157825.1| PREDICTED: similar to EGF-like protein [Hydra magnipapillata] Length = 1049 Score = 38.3 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 24/272 (8%), Positives = 56/272 (20%), Gaps = 13/272 (4%) Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 S +L+R + S V + ++ +G E ++ + Sbjct: 301 HFQNTSTEDLKRGGIRTITPRHHDNSSVDFVENGNEVTENNGRNQVINPIEHDITIHSNN 360 Query: 137 AVSLGKKAPIAFRVNP--DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + D++ +I +G +E + + L Sbjct: 361 NDLEIPGKEVNLDSQNISDLDGRDWNEIVSGIREASPEYNRQNDDTNFDTDIMLTHHIKK 420 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 G+ S + + + + H+ + G P Sbjct: 421 GLHSLHPSGSFHVHTAPDHLNIHVHEYDSEIDHCHHSPCENGGQCTSTLTGYSCSCPERY 480 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + + + N+F Sbjct: 481 TGVTCKEHLGYCDPDPCQNSGKCLDLEYGFKCSCPPGYHGEKCQEFSHCYSSPCNNFGAC 540 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + + D GP CE Sbjct: 541 IDVNHDFQCIC-----------PHDYFGPTCE 561 >gi|118095990|ref|XP_413915.2| PREDICTED: similar to mKIAA1781 protein [Gallus gallus] Length = 1100 Score = 38.3 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 25/277 (9%), Positives = 42/277 (15%), Gaps = 7/277 (2%) Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S G P P + + + + Sbjct: 477 DGFCLCSPGWQGDYCDQPCPDGTYGLNCSERCDCNHADGCDPVTGYCCCLAGWTGIHCDN 536 Query: 136 RAVSLGKKAPIAFRV------NPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + T + I + + Sbjct: 537 MCTQGRWGPNCSISCSCENGGSCAPEDGTCDCAPGYRGPLCQRICPPGFYGHHCSQPCPQ 596 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 V SG H+ D + F A + + N + G S Sbjct: 597 CVHSSGPCHHVSGHCDCLPGFFGALCNQVCPSGKYGKNCAELCQCTENGTCNPIDGSCQC 656 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 P G A + A Sbjct: 657 FPGWIGKDCSQTCPPGFWGTDCFHSCNCHNGAMCSPYDGECRCTHGWTGLYCTQRCPAAF 716 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + G G CE Sbjct: 717 YGKNCANVCQCQNGADCDHITGQCTCRTG-FTGKQCE 752 Score = 36.7 bits (83), Expect = 8.1, Method: Composition-based stats. Identities = 22/250 (8%), Positives = 42/250 (16%), Gaps = 20/250 (8%) Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S ++ + + + + + Sbjct: 98 GTDCSSG----------CDSDHWGPHCSNRCQCQNEALCNPITGACVCADGYQGWRCEEL 147 Query: 137 A----VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 G + + T + F S A + Sbjct: 148 CEPGSYGKGCQFQCQCHNGATCDHETGECHCAPGYTGVFCEERCPSGSHGAQCELRCPCQ 207 Query: 193 ISGVDMHIGSQIDQIESFHKAFKL------LRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 GV HI + + + HN H D G I Sbjct: 208 NGGVCHHITGECSCPAGWTGLVCAQPCPPGTFGINCSQVCPCHNGGHCDPVTGKCICTPG 267 Query: 247 DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 + + +C + V + I Sbjct: 268 YVGDRCQEECPIGTFGFQCTQRCDCQNGAKCYHVNGACMCDPGFKGIHCQERMCPEGFYG 327 Query: 307 AMNDFMRPTL 316 + P Sbjct: 328 LKCNKRCPCN 337 >gi|253688636|ref|YP_003017826.1| alanine racemase domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755214|gb|ACT13290.1| alanine racemase domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 380 Score = 38.3 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 39/137 (28%), Gaps = 2/137 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIK-TLAHLGSGLDIVSEGE 85 TPF ++N + + + V LK + + L S + + E Sbjct: 12 TPFLLIDEFRFQRNIDRLYQRTEALGSRVRPHLKTLRSIEAGRYLLKDANSPATVSTLAE 71 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESE-LKTLNQRAVSLGKKA 144 A + I +++G+ + +E + + A + Sbjct: 72 AEAFAKAGYTNLLYAVGIAPHKLPRIANLIRNGVNIHILLDSAEQAQAVVDFARANSVTF 131 Query: 145 PIAFRVNPDINANTHKK 161 + ++ D + Sbjct: 132 SVFIEIDCDGHRGGIPP 148 >gi|157372239|ref|YP_001480228.1| alanine racemase domain-containing protein [Serratia proteamaculans 568] gi|157324003|gb|ABV43100.1| alanine racemase domain protein [Serratia proteamaculans 568] Length = 388 Score = 38.3 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 6/48 (12%), Positives = 13/48 (27%), Gaps = 1/48 (2%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN-SNQAVIKTLAHLG 75 Y + +N + + + K N + + L G Sbjct: 30 CYVIDVDLVLENARLLQECAEKLGLSLYLMSKQFGRNPLLCQLLLKQG 77 >gi|224085966|ref|XP_002307757.1| predicted protein [Populus trichocarpa] gi|222857206|gb|EEE94753.1| predicted protein [Populus trichocarpa] Length = 202 Score = 38.3 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 8/106 (7%) Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 + +I EPGRF L T +I + D ++ + M LYD Sbjct: 97 QAYFPNEPGLTVISEPGRFFAESAFTLATNIIGKRVRGDLREYWINDGIYGSMNCILYDH 156 Query: 320 YHEINYIVNPAGDRLHIHA--------DIVGPICETGDFIALNRKI 357 + + ++ + GP C+ D + ++ Sbjct: 157 ATITCTPLACNSNHANLTCKGLRAYSSTVFGPTCDALDTVLTGHQL 202 >gi|149922547|ref|ZP_01910977.1| diaminopimelate decarboxylase [Plesiocystis pacifica SIR-1] gi|149816574|gb|EDM76069.1| diaminopimelate decarboxylase [Plesiocystis pacifica SIR-1] Length = 814 Score = 37.9 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 6/111 (5%) Query: 32 YSTTAIEKNYLTFSNAFDGM----DTMVCYALKAN--SNQAVIKTLAHLGSGLDIVSEGE 85 A + A A KAN S + A G+G+++ S E Sbjct: 93 LDVDAALERERVLVEALQRSVGELPLRNMAAFKANHSSLLQFARVQADAGAGVEVASLPE 152 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 L AL V +VF E+ +A+ G+ F + ++L + Sbjct: 153 LYTALCVGVRPGAVVFGNTNLNARELLIAMHLGVTAFCFDHPAKLARVLDC 203 >gi|121592921|ref|YP_984817.1| alanine racemase domain-containing protein [Acidovorax sp. JS42] gi|120605001|gb|ABM40741.1| alanine racemase domain protein [Acidovorax sp. JS42] Length = 393 Score = 37.9 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 3/62 (4%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV---IKTLAHLGSGLDIVSE 83 TP A+E+N + K + + + ++ G + VSE Sbjct: 25 TPALVVDLDAMERNIQRMAEFAHKHQVRWRPHAKMHKSAEIALQLEWSGARGHCVQKVSE 84 Query: 84 GE 85 E Sbjct: 85 AE 86 >gi|328470011|gb|EGF40922.1| arginine decarboxylase [Vibrio parahaemolyticus 10329] Length = 636 Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 111/335 (33%), Gaps = 33/335 (9%) Query: 18 LEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVI 68 + +L A + P + + +AF+ ++ Y +K N + V+ Sbjct: 50 VNELEAQQLNLPVLVRFPQIVHQRVHGICHAFNQAIEEYQYPNKYLLVYPIKVNQQREVV 109 Query: 69 KTLAH-------LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID----LALQS 117 + GL+ S+ EL LA ++ K + + Sbjct: 110 DEILASQAQLETKQLGLEAGSKPELLAVLALAQQGSSVIVCNGYKDREYVRLALIGEKLG 169 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 +E SEL + + A SLG K + R+ + S G+K Sbjct: 170 HKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQV 229 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + + V H+GSQ+ I +LR+ G NI++ DVG Sbjct: 230 LSVIERLKREGSLDAMQLVHFHLGSQMANIRDVRNGVNESARFYCELRALGANIEYFDVG 289 Query: 238 GGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVG 284 GGL + Y ++YA I Q + II E GR L A Sbjct: 290 GGLAVDYDGTRSQSSNSMNYGLAEYARNIVNTVGDVCQQYEQPMPVIISESGRSLTAHHA 349 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 +L++ VI + + L V ++ + Sbjct: 350 VLISNVIGTETYQPEEVHELGVDAPLLLQNMWRNW 384 >gi|308095303|ref|ZP_05904841.2| arginine 2-monooxygenase [Vibrio parahaemolyticus Peru-466] gi|308085161|gb|EFO34856.1| arginine 2-monooxygenase [Vibrio parahaemolyticus Peru-466] Length = 636 Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 111/335 (33%), Gaps = 33/335 (9%) Query: 18 LEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVI 68 + +L A + P + + +AF+ ++ Y +K N + V+ Sbjct: 50 VNELEAQQLNLPVLVRFPQIVHQRVHGICHAFNQAIEEYQYPNKYLLVYPIKVNQQREVV 109 Query: 69 KTLAH-------LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID----LALQS 117 + GL+ S+ EL LA ++ K + + Sbjct: 110 DEILASQAQLETKQLGLEAGSKPELLAVLALAQQGSSVIVCNGYKDREYVRLALIGEKLG 169 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 +E SEL + + A SLG K + R+ + S G+K Sbjct: 170 HKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQV 229 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + + V H+GSQ+ I +LR+ G NI++ DVG Sbjct: 230 LSVIERLKREGSLDAMQLVHFHLGSQMANIRDVRNGVNESARFYCELRALGANIEYFDVG 289 Query: 238 GGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVG 284 GGL + Y ++YA I Q + II E GR L A Sbjct: 290 GGLAVDYDGTRSQSSNSMNYGLAEYARNIVNTVGDVCQQYEQPMPVIISESGRSLTAHHA 349 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 +L++ VI + + L V ++ + Sbjct: 350 VLISNVIGTETYQPEEVHELGVDAPLLLQNMWRNW 384 >gi|28900025|ref|NP_799680.1| arginine decarboxylase [Vibrio parahaemolyticus RIMD 2210633] gi|153837551|ref|ZP_01990218.1| arginine decarboxylase [Vibrio parahaemolyticus AQ3810] gi|260365955|ref|ZP_05778442.1| arginine 2-monooxygenase [Vibrio parahaemolyticus K5030] gi|260899760|ref|ZP_05908155.1| arginine 2-monooxygenase [Vibrio parahaemolyticus AQ4037] gi|308094977|ref|ZP_05892959.2| arginine 2-monooxygenase [Vibrio parahaemolyticus AN-5034] gi|48474828|sp|Q87JS8|SPEA_VIBPA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC gi|28808308|dbj|BAC61513.1| biosynthetic arginine decarboxylase [Vibrio parahaemolyticus RIMD 2210633] gi|149749147|gb|EDM59952.1| arginine decarboxylase [Vibrio parahaemolyticus AQ3810] gi|308092545|gb|EFO42240.1| arginine 2-monooxygenase [Vibrio parahaemolyticus AN-5034] gi|308110386|gb|EFO47926.1| arginine 2-monooxygenase [Vibrio parahaemolyticus AQ4037] gi|308112871|gb|EFO50411.1| arginine 2-monooxygenase [Vibrio parahaemolyticus K5030] Length = 640 Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 111/335 (33%), Gaps = 33/335 (9%) Query: 18 LEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVI 68 + +L A + P + + +AF+ ++ Y +K N + V+ Sbjct: 54 VNELEAQQLNLPVLVRFPQIVHQRVHGICHAFNQAIEEYQYPNKYLLVYPIKVNQQREVV 113 Query: 69 KTLAH-------LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEID----LALQS 117 + GL+ S+ EL LA ++ K + + Sbjct: 114 DEILASQAQLETKQLGLEAGSKPELLAVLALAQQGSSVIVCNGYKDREYVRLALIGEKLG 173 Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 +E SEL + + A SLG K + R+ + S G+K Sbjct: 174 HKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQV 233 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 + + + V H+GSQ+ I +LR+ G NI++ DVG Sbjct: 234 LSVIERLKREGSLDAMQLVHFHLGSQMANIRDVRNGVNESARFYCELRALGANIEYFDVG 293 Query: 238 GGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVG 284 GGL + Y ++YA I Q + II E GR L A Sbjct: 294 GGLAVDYDGTRSQSSNSMNYGLAEYARNIVNTVGDVCQQYEQPMPVIISESGRSLTAHHA 353 Query: 285 ILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA 319 +L++ VI + + L V ++ + Sbjct: 354 VLISNVIGTETYQPEEVHELGVDAPLLLQNMWRNW 388 >gi|242016322|ref|XP_002428778.1| Fibrillin-2 precursor, putative [Pediculus humanus corporis] gi|212513463|gb|EEB16040.1| Fibrillin-2 precursor, putative [Pediculus humanus corporis] Length = 2816 Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 24/279 (8%), Positives = 49/279 (17%), Gaps = 6/279 (2%) Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 V + + T + G Y + +L N Sbjct: 1797 FQCVCLQGYQLTPFRDNCVDIDECQRHPNTCNNGTCMNSVGSYSCHCYLGFKLSPNNDCI 1856 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + N + + G Sbjct: 1857 DIDECRTMPFLCRNGRCRNTIGSFTCDCVDGYTMTSDEMNCRDVDECTEHPNPCQHPGKC 1916 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 ++ + + N + G + P + Sbjct: 1917 QNLMGSYTCLCPTGYKSINNNTACVDIDECVENEGTCEDGTCINTDGSFRCDCPDGFIVS 1976 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 S + + + R + + V S K + Sbjct: 1977 SNGMKCIDIRKDFCYDQFYRGICDTPRMEFISVKECCCSMGKAWGKNCEQCPPEGSDAFN 2036 Query: 318 DAYHEINYIVNPAGDRLHIHA--DIVGPICETGDFIALN 354 + + GD D+ CE GD I + Sbjct: 2037 KLCPQGPGRGDTGGDINECEFMPDV----CENGDCINTD 2071 >gi|147899258|ref|NP_001082958.1| hypothetical protein LOC571260 [Danio rerio] gi|141795657|gb|AAI39638.1| Zgc:162816 protein [Danio rerio] Length = 341 Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 4/45 (8%), Positives = 12/45 (26%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 TP +++N + + +K + + Sbjct: 12 TPALVVDLDKVKRNAEGMKERCQKLQVQLRPHMKTHKTLECADIM 56 >gi|157115796|ref|XP_001652701.1| attractin [Aedes aegypti] gi|108876769|gb|EAT40994.1| attractin [Aedes aegypti] Length = 1211 Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 19/257 (7%), Positives = 39/257 (15%), Gaps = 10/257 (3%) Query: 93 PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 + + + + Y + KT + +L + Sbjct: 669 CPENDEQICTQLHGCHACTAYTFCHWDYERSKCFYVGNKTSDIMNEALPCPPACSVLTTC 728 Query: 153 DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK 212 ++ G SQ Sbjct: 729 GNCTLEECIWCQNEQRCVDKNAYTASFPYGQCREWTTGSNKCRAASSGKSQCG--FYKTC 786 Query: 213 AFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKII 272 A + GG A+ P + + Sbjct: 787 AQCRDDPACGWCDDGSMTGLGKCLPGGDSGAHEEMECPAARWHFTHCPSCQCNGHSTCPD 846 Query: 273 LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 + + D + + Y + G Sbjct: 847 SKTCKQPCKDPMMGSNCEKCKPGYWGNPVNGGTCQKCECNGQAQYCHSETGKCFCSTKG- 905 Query: 333 RLHIHADIVGPICETGD 349 + G CE D Sbjct: 906 -------LAGDHCEKCD 915 >gi|169617796|ref|XP_001802312.1| hypothetical protein SNOG_12079 [Phaeosphaeria nodorum SN15] gi|160703488|gb|EAT80491.2| hypothetical protein SNOG_12079 [Phaeosphaeria nodorum SN15] Length = 415 Score = 37.9 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 22/68 (32%), Gaps = 2/68 (2%) Query: 23 HVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKT-LAHLG-SGLDI 80 + TP + I+KN + +K++ ++ + + G + + Sbjct: 28 EDLPTPAIVLDKSKIKKNCAAMLQVCQQLGVGFRAHVKSHKTLSLSRLQVGETGPANFIV 87 Query: 81 VSEGELRR 88 + E Sbjct: 88 STVIEAEN 95 >gi|86610204|ref|YP_478966.1| arginine decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558746|gb|ABD03703.1| arginine decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 640 Score = 37.9 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 84/255 (32%), Gaps = 21/255 (8%) Query: 15 NVSLEKL-----AHVVQTPFYCYSTTAIEKN----YLTFSNAFDGMDT----MVCYALKA 61 + L L A +Q P + +F A Y +K Sbjct: 49 GIDLYHLVMDLVARGLQLPLLIRFPEIVADRMRQICESFQQAIQRFGYPNVYRGVYPVKV 108 Query: 62 NSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA--- 114 N + +++ + G GL+ S+ EL ALA ++ K D ++ A Sbjct: 109 NQQRHLVEEVVKHGRAYHFGLEAGSKPELLIALALLDTPGALLICNGYKDRDFMETALLA 168 Query: 115 -LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI 173 +E EL+ + Q A LG + R + S G + Sbjct: 169 QRLGRTPIIVLERLQELELVLQAADQLGIDPILGVRAKLSAQGSGRWGTSAGDRAKFGLT 228 Query: 174 PIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQH 233 + + + + HIGSQI + +A + + +L G + + Sbjct: 229 ATEILQVVERLREAGKLHCLRLLHYHIGSQISMVSVHGRAVREASQIYIELVKLGAPMGY 288 Query: 234 IDVGGGLGIAYHSDH 248 +D+GGGLG+ Y Sbjct: 289 LDIGGGLGVDYDGSQ 303 >gi|112419424|gb|AAI22307.1| LOC571260 protein [Danio rerio] Length = 402 Score = 37.9 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 4/45 (8%), Positives = 12/45 (26%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTL 71 TP +++N + + +K + + Sbjct: 42 TPALVVDLDKVKRNAEGMKERCQKLQVQLRPHMKTHKTLECADIM 86 >gi|62261120|gb|AAX77961.1| unknown protein [synthetic construct] Length = 504 Score = 37.9 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 84/276 (30%), Gaps = 24/276 (8%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVIKTLAHLGSGLD 79 P Y ++ +F + Y +K N Q +IK + Sbjct: 78 PLVLYFEHILKNQLDKLYTSFGKAIDDFSYTCKYSLAYPIKVNPEQKIIKAIYDYHQHNQ 137 Query: 80 IVSEGEL----RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 + + E+ A+ G Q Sbjct: 138 VSLDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEI 197 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS-TLPGVKIS 194 + + + + I +K FG+ + QI+ + K+ Sbjct: 198 NIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQK---FGLSLSQINECINFLKTNQLQQKLL 254 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP-PSS 253 + HIGSQI + + L + +L+S+ N+++ID GGGL + Y RP Sbjct: 255 LLHSHIGSQIKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGGLAVNYDEYDRPSYDF 314 Query: 254 SDYA-------SLIHQYFGNLQCKIILEPGRFLVAD 282 YA +Y+ I+ E GR + A+ Sbjct: 315 DSYAKNIIKNCKYYAEYYNCDMPSIVTESGRAITAE 350 >gi|189501781|ref|YP_001957498.1| hypothetical protein Aasi_0340 [Candidatus Amoebophilus asiaticus 5a2] gi|189497222|gb|ACE05769.1| hypothetical protein Aasi_0340 [Candidatus Amoebophilus asiaticus 5a2] Length = 2413 Score = 37.9 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 62/233 (26%), Gaps = 11/233 (4%) Query: 55 VCYALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLA 114 + +A K N V+K L G+G+ ++ E A V + Sbjct: 1900 LHWACK-NGYLEVVKYLLEKGAGIHAKNKNEETPFHWACNKGHLEVV----------EYL 1948 Query: 115 LQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIP 174 L+ G E + DI+A + ++ K G Sbjct: 1949 LEKGADIHAKNKNEETPFHWAFENDYVEVVKYLLEKGADIHAKNKNEETSLHWACKNGHL 2008 Query: 175 IHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI 234 + + A K +H + +E K D+ + ++ ++ Sbjct: 2009 EVVKYLIKKGADIHAKNKNEETSLHWACKNGHLEVVKYLIKKGADIHAKNKNEETSLHWA 2068 Query: 235 DVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILV 287 G L + + + LE ++L+ + Sbjct: 2069 CKNGHLEVVKYLIKKGADIHAKNKNEETSLHWACKNGHLEVVKYLIKKGADIH 2121 >gi|239610223|gb|EEQ87210.1| NF-X1 finger transcription factor [Ajellomyces dermatitidis ER-3] Length = 1166 Score = 37.9 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 21/276 (7%), Positives = 54/276 (19%), Gaps = 9/276 (3%) Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS-GIYCFNVESESELKTLNQRAVSLG 141 E R+ + T+ + + + + + Sbjct: 202 IYECPICTNELGRKTRVWSCSLCWTVFHLSCIKKWSNNEGSVMARPRQQQDHEDGQDHPR 261 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + DI +T+ + + + P+ + + + Sbjct: 262 QWRCPGCNLPHDILPSTYNCWCEKEMDPR---PLPGLPPHSCGQTCSRARRGCPHPCDSV 318 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + S + D G P Sbjct: 319 CHSGPCPPCAAMGPTQFCFCGRHESTKKCVDT-DYENGWSCREPCGELLPCLQHKCPRPC 377 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA-- 319 C+ I++ + ++ +K + T +D Sbjct: 378 HEGLCGACEEIVDARCYCGKSETRIMCSNRDEEKQSRLTHGKGTSEERVEEWVGCFDCKE 437 Query: 320 -YHEINYIVNPAGDRLHIHADIVGPICETG-DFIAL 353 + D+ P C + D I Sbjct: 438 ICDRDYDCGVHRCQKRCHPQDVAVPHCPSSPDVITK 473 >gi|261192707|ref|XP_002622760.1| NF-X1 finger transcription factor [Ajellomyces dermatitidis SLH14081] gi|239589242|gb|EEQ71885.1| NF-X1 finger transcription factor [Ajellomyces dermatitidis SLH14081] Length = 1166 Score = 37.9 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 21/276 (7%), Positives = 54/276 (19%), Gaps = 9/276 (3%) Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS-GIYCFNVESESELKTLNQRAVSLG 141 E R+ + T+ + + + + + Sbjct: 202 IYECPICTNELGRKTRVWSCSLCWTVFHLSCIKKWSNNEGSVMARPRQQQDHEDGQDHPR 261 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + + DI +T+ + + + P+ + + + Sbjct: 262 QWRCPGCNLPHDILPSTYNCWCEKEMDPR---PLPGLPPHSCGQTCSRARRGCPHPCDSV 318 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + S + D G P Sbjct: 319 CHSGPCPPCAAMGPTQFCFCGRHESTKKCVDT-DYENGWSCREPCGELLPCLQHKCPRPC 377 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDA-- 319 C+ I++ + ++ +K + T +D Sbjct: 378 HEGLCGACEEIVDARCYCGKSETRIMCSNRDEEKQSRLTHGKGTSEERVEEWVGCFDCKE 437 Query: 320 -YHEINYIVNPAGDRLHIHADIVGPICETG-DFIAL 353 + D+ P C + D I Sbjct: 438 ICDRDYDCGVHRCQKRCHPQDVAVPHCPSSPDVITK 473 >gi|88601228|gb|ABD46612.1| diaminopimelate decarboxylase-like protein [Trimastix pyriformis] Length = 125 Score = 37.9 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 3/96 (3%) Query: 257 ASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA--DKTFVILDVAMNDFMRP 314 A + + +EPG FL+A+ L+T V I + FV L+ + +RP Sbjct: 31 AFVEFYRNYGRMLHLEIEPGTFLLANSASLITSVRDIVSTGSTGYNFVKLNAGYPEIIRP 90 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350 +LY A H + I + R+ +VG CE+GD Sbjct: 91 SLYGAQHPLVTIPSKPNPRV-CSYVVVGHTCESGDL 125 >gi|313246976|emb|CBY35819.1| unnamed protein product [Oikopleura dioica] Length = 1701 Score = 37.9 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 29/270 (10%), Positives = 54/270 (20%), Gaps = 10/270 (3%) Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGV-GKTIDEIDLALQSGIYCFNVESESELKTL 133 G G E P ++ G ID +G C ++ + Sbjct: 138 GDGFTCKDINECETGEHNCTPLGGKCWNKPGGYGCMCIDGFKGNGWKCEDINECEKEGVC 197 Query: 134 NQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 ++RA + + + K + G+ + K Sbjct: 198 HERAECFNEPGSFRCKCGAGYRGDGVKLCVDLDE-CAAGMHKCDSAATCKNYVGTHRCKC 256 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSS 253 + +GS T + N +V GG Sbjct: 257 AKGYKDLGSGFRGECQDIDECAFNNQCTGKANINCI-----NVPGGYRCKCKDGMIGDLR 311 Query: 254 SDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF-- 311 G +C L + + + N Sbjct: 312 RGCKDQDECVAGTHECSPYAICTNTLGSHKCACRAGFKGDGLACEDINECATGNHNCNAK 371 Query: 312 -MRPTLYDAYHEINYIVNPAGDRLHIHADI 340 R E +G+ D+ Sbjct: 372 GSRCINIPGSFECQCAPGYSGNPKTGCYDV 401 >gi|307129851|ref|YP_003881867.1| metal-activated pyridoxal enzyme [Dickeya dadantii 3937] gi|306527380|gb|ADM97310.1| metal-activated pyridoxal enzyme [Dickeya dadantii 3937] Length = 381 Score = 37.9 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 18/57 (31%) Query: 26 QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 TP + N + + + LK + V + L G+G VS Sbjct: 11 PTPSLVLDEKIMLANIARLRDRPELAGIALRPHLKTAKSVDVARRLLTNGTGPATVS 67 >gi|302135381|gb|ADK94033.1| vitellogenin receptor [Spodoptera litura] Length = 1789 Score = 37.9 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 22/270 (8%), Positives = 51/270 (18%), Gaps = 6/270 (2%) Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G +S + F K E + + + + N Sbjct: 46 MGGGCISVSQYCDGKLDCDDGSDENFCIEHKPFQEFCNEIHQYMCRDSTKCVPLSWLCNN 105 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 P +N N+ K + + Sbjct: 106 EPDCDDGSDEFNCTALPAVNVNSTCKGFQCGDGKCISFLWVCDGVYDCEDKSDEYAEELC 165 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + I + + D + + + GL P + Sbjct: 166 SHVSRPHAIVDGSYCQELH-TMDDRNYKCLDASFCLPSSMMCDGLQDCRDGSDEGPFCKN 224 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 + ++ + + + V + + Sbjct: 225 WNTMCDNFKCMGNDTMCSPESFGASCLCLPSHFMRQYDYITKQCQDVNECLMEHPPCSHK 284 Query: 316 LYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 +A +P R D+ G +C Sbjct: 285 CINADGHYICECDPGYKR-----DVYGYLC 309 >gi|163716977|gb|ABY40628.1| alpha 3,4,5-laminin [Ciona savignyi] Length = 3777 Score = 37.9 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 54/233 (23%), Gaps = 8/233 (3%) Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 + + T+ +R K I R + +A+T + + + K + Sbjct: 251 HLMAVSEQDPTVTRRYYYSIKDISIGGRCVCNGHADTCSPDPSDQYKLKCECRHNTCGDS 310 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG-- 239 K + + + + H R + GG Sbjct: 311 CERCCEGFVQKAWRAAVPESTNQCEACNCHGHTTECEYDEDVARRRLSLDLAGNYEGGGV 370 Query: 240 ---LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEP-GRFLVADVGILVTKVISIKK 295 + +S Y + + + + V + + Sbjct: 371 CLNCQHHTAGINCEQCASGYWRPSNVDPRDPNGCRPCDCDSTYTVGSCEPNTGRCYCKVQ 430 Query: 296 SADKTFVILDVAMNDF--MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 A DF R +N + P GD + G C+ Sbjct: 431 YAGDRCDSCAPGYYDFPECRACDCYYNGTLNDVCLPVGDACPCKYNFAGKYCD 483 >gi|194752203|ref|XP_001958412.1| GF10909 [Drosophila ananassae] gi|190625694|gb|EDV41218.1| GF10909 [Drosophila ananassae] Length = 3720 Score = 37.9 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 21/235 (8%), Positives = 48/235 (20%), Gaps = 11/235 (4%) Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 + + T+ +R K I R + +A+T Sbjct: 245 HLMSVARQDPTVTRRYFYSIKDISIGGRCMCNGHADTCDVKDPKSPVRILACRCQHHTCG 304 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDV---GG 238 PG + + ++ E + + + I GG Sbjct: 305 IQCNECCPGFEQKKWRQNTNARPFNCEPCNCHGHSNECKYDEEVNRKGLSLDIHGRYEGG 364 Query: 239 GLGIAYHSD----HRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK 294 G+ + + Y +++ + F T Sbjct: 365 GVCRNCQHNTVGINCNKCMPKYYRPKGKHWNETDVCSPCQCDHFYSTGHCEEETGNCECL 424 Query: 295 KSADKTFVILDVAMNDFMRPTLYDAYH----EINYIVNPAGDRLHIHADIVGPIC 345 + + + +G + + GP C Sbjct: 425 AAFQPPNCDSCAYGYYGYPNCRECECNLNGTNGYHCEAESGQQCPCKINFAGPYC 479 >gi|158299350|ref|XP_319454.4| AGAP010265-PA [Anopheles gambiae str. PEST] gi|157014322|gb|EAA14361.4| AGAP010265-PA [Anopheles gambiae str. PEST] Length = 660 Score = 37.9 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 20/269 (7%), Positives = 44/269 (16%), Gaps = 9/269 (3%) Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 + I E G + +E + L + Sbjct: 191 CANLCRKRDDQFGHYTCSPIGERVSQCTPGCLHGHCNKPNECICQSGWKGPLCDECEPYP 250 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIE 208 + I F + + +G ++ + Sbjct: 251 GCLHGTCKKPWECICKEGWGGLFCNQDLNYCTNHKPCLNGGTCFNTGQGLYTCQCRPGYK 310 Query: 209 SFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQ 268 + +D + + + Sbjct: 311 GTECELSITSCSDHPCLHGATCTSTVDGETSMDADGRKYQCHCAKGWMGRHCEREAITCA 370 Query: 269 CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM--------NDFMRPTLYDAY 320 K + V + + + N + Sbjct: 371 EKPCHQGTCVDVTPSSSSSSSTSANFRCDCPPGYSGTACEIKSGECYSNYCANGGTWIGM 430 Query: 321 HEINYIVNPAGDRLHIHAD-IVGPICETG 348 GDR + D VG +C G Sbjct: 431 LMCLCPDGFVGDRCEENVDDCVGNLCLNG 459 >gi|56404659|sp|Q9AVB0|LECB_PHYAM RecName: Full=Lectin-B; AltName: Full=PL-B; Flags: Precursor gi|13537555|dbj|BAB40792.1| mitogen PL-B [Phytolacca americana] Length = 361 Score = 37.9 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 17/245 (6%), Positives = 34/245 (13%), Gaps = 3/245 (1%) Query: 101 FSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHK 160 GV Q + + + + + Sbjct: 65 HCGVSVQHCGDGCQSQCVTNWRCGKDFDDRTCPKKLLCCSKDGWCGNTDAHCGEGCQSQC 124 Query: 161 KISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDL 220 + + FG + G Q + + Sbjct: 125 EQYNWRCGVDFGNRTCPNDLCCSVGGWCGTTDD---HCGEGCQSQCEQYNWHCGVDFGNR 181 Query: 221 TQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLV 280 T + G +L C G Sbjct: 182 TCPNDLCCSEWGWCGITEGYCGEGCQSQCNHQRCGKDFAGRTCLNDLCCSEWGWCGSSEA 241 Query: 281 ADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI 340 + + + F + D D Sbjct: 242 HCGQGCQSNCDYNRCGRNFGFRTCPNELCCSSGGWCGSNDAHCGKGCQSQCDYWRCGVDF 301 Query: 341 VGPIC 345 G +C Sbjct: 302 SGRVC 306 >gi|220927953|ref|YP_002504862.1| xylose isomerase [Clostridium cellulolyticum H10] gi|219998281|gb|ACL74882.1| Xylose isomerase domain protein TIM barrel [Clostridium cellulolyticum H10] Length = 266 Score = 37.9 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 26/90 (28%), Gaps = 15/90 (16%) Query: 14 ENVSLEKLAHVVQTPFYC------------YSTTAIEKNYLTFSNAFDGMDTMVCYALKA 61 E + LA + TP Y + KN + A + ++ Sbjct: 87 EGIDYINLAEKLGTP-YIRVLGDAQPQPSDIDIDFVVKNLKNLAAAAKEKGVKLL--VET 143 Query: 62 NSNQAVIKTLAHLGSGLDIVSEGELRRALA 91 N A K + L +D S G L Sbjct: 144 NGVFADSKVMKSLLDKVDSDSVGVLWDIHH 173 >gi|238921883|ref|YP_002935397.1| Glycoside Hydrolase Family 13 candidate a-glycosidase (amylase-related) [Eubacterium eligens ATCC 27750] gi|238873555|gb|ACR73263.1| Glycoside Hydrolase Family 13 candidate a-glycosidase (amylase-related) [Eubacterium eligens ATCC 27750] Length = 1390 Score = 37.9 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 19/265 (7%), Positives = 48/265 (18%), Gaps = 7/265 (2%) Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 +RA+ AE + + +++ + + E+ + G Sbjct: 895 KRAVCTECNAEYGTLNPANHSGEQVWVQTEKTHQKKYDCCGEEVTNIADHIWENGHCTVC 954 Query: 147 AFRVNPDINANTH-----KKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + T I + + A+T + I Sbjct: 955 GYDCIHTGGKATCTQKAVCNICHSEYGEINADNHTGTEKWTQTATTHEKRYDCCGKVTIE 1014 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + + + + + + G + + + Sbjct: 1015 QENHKWKDGVCETCGYVCVHSGGEATCTKGAVCETCGKEYTDKDMANHSGNQVWVQTEKT 1074 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 C + V + G + K N Sbjct: 1075 HQKKYDCCGAEVTNIANHVWENGHCTVCGYDCIHTGGKATCTQKAVCNICHSEYGEINAD 1134 Query: 322 EINYIVNPAGDRL--HIHADIVGPI 344 D G + Sbjct: 1135 NHTGTEKWTQTATTHEKKYDCCGKV 1159 >gi|221109020|ref|XP_002169454.1| PREDICTED: similar to NFX1-type zinc finger-containing protein 1 [Hydra magnipapillata] Length = 1756 Score = 37.9 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 17/251 (6%), Positives = 45/251 (17%), Gaps = 12/251 (4%) Query: 97 ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA 156 + ++ L L + L + P + + + Sbjct: 1036 DCQERCLKQMCKNKEHLCLHKCHFGIECNPCDNLVEKKFELCGHISQVPCSVSTSEAVCQ 1095 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL 216 T K+ + + + + +K V +Q + +K + Sbjct: 1096 ETCSKLISCGHQCSNKCGEKCLDKINCTVLVSKVLKCGHVQSVFCNQDPDVAQCNKTCEA 1155 Query: 217 LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPG 276 + H P C Sbjct: 1156 ELACGHTCSGTCFQCFEGTYHMKCTMTCKKFHTCPHECKVRCGQTCVPCEQPCLF----- 1210 Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPA--GDRL 334 + + + ++ Y+ + + Sbjct: 1211 -----RCSHRICPNKCFETCEKCLEPCKNRCLHKKCTKLCYEECNIDPCNKRCSLLQKCR 1265 Query: 335 HIHADIVGPIC 345 H + G C Sbjct: 1266 HQCYGLCGETC 1276 >gi|159901911|gb|ABX10644.1| alanine racemase [uncultured planctomycete 3FN] Length = 363 Score = 37.9 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 39/132 (29%), Gaps = 4/132 (3%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP C ++ N T ++ K + A+ +K +A G+ E Sbjct: 12 TPALCIDLNQLDANIKTMADFIISRGKQWRPHEKCHKTPAIALKQIAAGAIGVTCAKVSE 71 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 AA + + + +V + + ++ ++ Sbjct: 72 AEVMAAA---GIHDILIANMIVGTPKWERVAALCRTTDVIIACDHFAQVEPLAAICRRNG 128 Query: 146 IAFRVNPDINAN 157 + RV +++ Sbjct: 129 VTCRVIVEVDIG 140 >gi|189528962|ref|XP_001344375.2| PREDICTED: endothelial cells scavenger receptor-like [Danio rerio] Length = 891 Score = 37.9 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 20/262 (7%), Positives = 45/262 (17%), Gaps = 9/262 (3%) Query: 73 HLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT 132 G S+ + + + + + Sbjct: 150 EEGWWTSTCSKACQCHLATSTCDQATGRCICNEGYWGQKCSLPCNCYVSPCQQRTGTCQC 209 Query: 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--------QIHSLYAY 184 L+ + I N D + T + ++ F +S Sbjct: 210 LHGWWGPSCDRRCICNLNNADCDVQTGGCLCYPGYKEPFCNEPCDSGKYGRGCKNSCGRC 269 Query: 185 ASTLPGVKISGVDMHIGS-QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA 243 P K+ G+ Q++ + N+ D G + Sbjct: 270 EGGRPCSKLDGLCDACEPGWNGTRCDQRCPAGYYGHRCQEICPHCRNMDPCDPETGACLQ 329 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 + P + G G + + Sbjct: 330 CNPGWTGPRCDKPCTDGRYGDGCRFLCKTCNHGHCDHVTGRCICLPGFQGESCNSTCPFN 389 Query: 304 LDVAMNDFMRPTLYDAYHEINY 325 L + Sbjct: 390 LYGFNCSSTCDCGTGIHIAFIC 411 >gi|157115798|ref|XP_001652702.1| attractin [Aedes aegypti] gi|108876770|gb|EAT40995.1| attractin [Aedes aegypti] Length = 1207 Score = 37.5 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 19/257 (7%), Positives = 39/257 (15%), Gaps = 10/257 (3%) Query: 93 PVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNP 152 + + + + Y + KT + +L + Sbjct: 669 CPENDEQICTQLHGCHACTAYTFCHWDYERSKCFYVGNKTSDIMNEALPCPPACSVLTTC 728 Query: 153 DINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHK 212 ++ G SQ Sbjct: 729 GNCTLEECIWCQNEQRCVDKNAYTASFPYGQCREWTTGSNKCRAASSGKSQCG--FYKTC 786 Query: 213 AFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKII 272 A + GG A+ P + + Sbjct: 787 AQCRDDPACGWCDDGSMTGLGKCLPGGDSGAHEEMECPAARWHFTHCPSCQCNGHSTCPD 846 Query: 273 LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 + + D + + Y + G Sbjct: 847 SKTCKQPCKDPMMGSNCEKCKPGYWGNPVNGGTCQKCECNGQAQYCHSETGKCFCSTKG- 905 Query: 333 RLHIHADIVGPICETGD 349 + G CE D Sbjct: 906 -------LAGDHCEKCD 915 >gi|163929821|dbj|BAF95910.1| chicken D-serine dehydratase [Gallus gallus] Length = 376 Score = 37.5 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 3/80 (3%) Query: 18 LEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS- 76 L L + TP T +N + + +K + LA G+ Sbjct: 3 LGALLDTLPTPALTIDRTTARRNAERMRERCRALGVRLRPHVKTHKTLE-GGLLATGGTR 61 Query: 77 -GLDIVSEGELRRALAAPVP 95 G+ + + E R Sbjct: 62 RGIAVSTLAEARFFADGGFD 81 >gi|308470090|ref|XP_003097280.1| hypothetical protein CRE_20481 [Caenorhabditis remanei] gi|308240370|gb|EFO84322.1| hypothetical protein CRE_20481 [Caenorhabditis remanei] Length = 634 Score = 37.5 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 20/182 (10%), Positives = 41/182 (22%), Gaps = 11/182 (6%) Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 K + S N + G I + Sbjct: 287 KPHFRHAFTIMTCFEFGSNRVLKIRNPWGHN--GEYTFNGKWTTPDGSWEIYKNDTENCG 344 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL-----DV 306 S + + R+ I + I + + + Sbjct: 345 YWEMIGSFWIDFDELFTYFFDVSISRYRDCWSEIRLNMAIGGLYDDSQKMIKISVSEECD 404 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLL 366 ++P + + ++ + D V +CE D I+ + + PGD Sbjct: 405 VCVSAVKPKYHKQRYHTWISIHRSDPSNPEKIDQV-MLCEPIDRISEDVHLP---PGDYF 460 Query: 367 YI 368 I Sbjct: 461 MI 462 >gi|209546068|ref|YP_002277958.1| alanine racemase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538925|gb|ACI58858.1| alanine racemase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 366 Score = 37.5 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 4/71 (5%) Query: 19 EKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKAN--SNQAVIKTLA-HLG 75 +++A + TP + N + D +K + AV + A G Sbjct: 14 DRIAD-LSTPRPVIDEDRLAANIARVQSYMDEHGLNFRPHIKTHKIPALAVAQIAAGAKG 72 Query: 76 SGLDIVSEGEL 86 VSE E+ Sbjct: 73 INCQKVSEAEV 83 >gi|308188666|ref|YP_003932797.1| hypothetical protein Pvag_3206 [Pantoea vagans C9-1] gi|308059176|gb|ADO11348.1| Uncharacterized protein [Pantoea vagans C9-1] Length = 393 Score = 37.5 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 20/61 (32%), Gaps = 3/61 (4%) Query: 27 TPFYC-YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEG 84 TP Y +E+N + +K + + + + G+ G+ + Sbjct: 32 TP-YIEVDAERLEQNLQHMQRKASATGVALRPHIKTHKSVWIAQRQLEYGAQGVTVSKPS 90 Query: 85 E 85 E Sbjct: 91 E 91 >gi|298710901|emb|CBJ26410.1| conserved unknown protein [Ectocarpus siliculosus] Length = 899 Score = 37.5 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 19/254 (7%), Positives = 40/254 (15%), Gaps = 13/254 (5%) Query: 99 IVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANT 158 + G G Y + + + + Sbjct: 166 CGYDGGDCCRCTCRDYNSWGYYTNCGYYGYDCMDPDAPSSCSTDSPT--PSPAAGTDWPE 223 Query: 159 HKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL-- 216 + + + + S + + Sbjct: 224 CEGYIYMIGDGSCDYYNNNEECDWDGGDCCSCTCEGSSYYSCSSYSMDCQDPNANCTTPS 283 Query: 217 ----LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKII 272 + + +N + D GG AY Y + Sbjct: 284 PTPYCPWASDGYCDSYYNTEDCDWDGGDCCAYGCSSTTCLDPIYGCDSITTYYGDNDVST 343 Query: 273 LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGD 332 +L + V+ A N D + Sbjct: 344 STFSTYLTSSDADSVSSGCFDGDWAVSDGKCDSGNNNAACDYDGGDCCEC-----DCYDY 398 Query: 333 RLHIHADIVGPICE 346 +VG C Sbjct: 399 GEVYECGVVGYYCL 412 >gi|145549039|ref|XP_001460199.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124428028|emb|CAK92802.1| unnamed protein product [Paramecium tetraurelia] Length = 1639 Score = 37.5 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 19/273 (6%), Positives = 49/273 (17%), Gaps = 11/273 (4%) Query: 79 DIVS-EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D +S + + E F+ V + + + + N Sbjct: 78 DCLSCKNSMFLFGNECKCGEHQFFNYVNYQCEGLKNKIFQIDCHPTCSKCNGSLNSNCVK 137 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + + + + + + I+ + + Sbjct: 138 CNQEQYTLLQSNICICKDG-----YYRSIDNNCYQCDINCKTCSGPTNNDCLSCYNNKSG 192 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + N + A D Sbjct: 193 SSCDCPYGYYQPQLVPNTSFCFKCHPTCQTCSNSGEFNCLTCYAFATLQPDSNMCLCDLG 252 Query: 258 SLIHQYFGNLQ-----CKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 + + ++ + I +P VA S Sbjct: 253 FVWNGNSCSICDTACGNRCIFDPNNCCVAPCVQCFNPNCSTCDGTQACTSCQQGKTGANC 312 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 + + + +VG IC Sbjct: 313 NLSCDPNCKGCDRTDKTLCTSCNSPFVVVGGIC 345 >gi|325849932|ref|ZP_08170971.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325479956|gb|EGC83039.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 246 Score = 37.5 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 12/229 (5%) Query: 129 ELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIH--QIHSLYAYAS 186 E L++ KK +NPD+ +THK I T + KFG+ I + Sbjct: 19 EYYLLDKILKEKKKKTSCLLSINPDVKTDTHKFIQTSNADSKFGLNIRDENTEKIIEKII 78 Query: 187 TLPGVKISGVDMHIGSQIDQ-IESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH 245 P + + G HIGSQ+ +A + H+++GGG G + Sbjct: 79 ENPNINLLGFHAHIGSQVKNLEFFKEEAKIMADFTKNIQDKFKKCFSHLNLGGGFGTREN 138 Query: 246 SDHRPPSSSDYASLIHQYFGNLQ-------CKIILEPGRFLVADVGILVTKVISIK-KSA 297 + + + + +L + +EPGR L++ VG ++ +V S K Sbjct: 139 LEDEDLDLEKFLKGLIVFMEDLFEKNKLSITNLSIEPGRSLISKVGSILYRVGSTKVTME 198 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + +D M+D +RP+LY A + + N + + + G +CE Sbjct: 199 GYPLIFVDGGMSDNIRPSLYGARY-SAILANKLDNEKNQTYRVGGKLCE 246 >gi|297380210|gb|ADI35097.1| arginine decarboxylase [Helicobacter pylori v225d] Length = 615 Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 12/118 (10%) Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR----KI 357 +L+ + + + +N ++ A + C++ IA + + Sbjct: 444 YLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAFDSTKPLFL 503 Query: 358 ALPRPGD---LLYIEKTGAYGAVQSGTYNSRLLIPE---IMVNGSQFHI--IRPRMTF 407 + L GAY V +N E + + + I T Sbjct: 504 HDIDVDEEEYFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKGDYEVEDICEAQTI 561 >gi|324519102|gb|ADY47287.1| Granulin [Ascaris suum] Length = 335 Score = 37.5 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 25/300 (8%), Positives = 51/300 (17%), Gaps = 21/300 (7%) Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G+G G A + + Sbjct: 32 GNGATCCLIGRGAYGCCPLPNAVCCEDHLHCCPYKTTCDVEAQRCISSDGFHYEMRRKQQ 91 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + R D A + + L+ Sbjct: 92 ALEIFVDYVLCPDRRTKCDDGATCCELSQGRYGCCPLPSAVCCSDHLHCCPKGTECDVQH 151 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHI--DVGGGLGIAYHSDHRPPS 252 G + I A K+ + + GG Sbjct: 152 GQCRTLDGGIMPWWRKQSAMKVSHKASVRSEPASTICTDGAKCPAGGQCCEGEDGSSSCC 211 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKV--------------ISIKKSAD 298 + + G+ D ++++K+ Sbjct: 212 PFRDGACCEGAQFCCPRGYQCDDGQCFHEDDDMVISKLAVETSPTSEDTDDESVTCPDGS 271 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIA 358 + ++ ++ V C GD A NRK+ Sbjct: 272 TCPATNKCCRSTDDDGNVFYRCCPLSKGVCCNNSCCPRGYR-----CVEGDKCASNRKLP 326 >gi|295695164|ref|YP_003588402.1| alanine racemase domain protein [Bacillus tusciae DSM 2912] gi|295410766|gb|ADG05258.1| alanine racemase domain protein [Bacillus tusciae DSM 2912] Length = 389 Score = 37.5 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 24/74 (32%), Gaps = 1/74 (1%) Query: 22 AHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDI 80 A +TP +++N + + +KA+ + + G+ G+ + Sbjct: 12 AEWFETPAVVVHRPTLDRNIARMAALAADAKVALRPHVKAHKTVEIARRQRMAGTQGITV 71 Query: 81 VSEGELRRALAAPV 94 GE A Sbjct: 72 AKLGEAEVFAEAGF 85 >gi|194880923|ref|XP_001974602.1| GG21836 [Drosophila erecta] gi|190657789|gb|EDV55002.1| GG21836 [Drosophila erecta] Length = 650 Score = 37.5 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 10/270 (3%), Positives = 39/270 (14%) Query: 67 VIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVES 126 +++ + L+ S + + G + + Sbjct: 147 ILREVEKALIKLNAASISLANCIAQSQPQPLPPQNTTAGGPGWNTTQFPNTNTTPNFTLT 206 Query: 127 ESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAS 186 + + + + +G Q ++ Sbjct: 207 TIYPNLNTTTEGPWLGNTTTQGPWWGNNSTQGPWWGNNSTQGPWWGNTTTQGPWWGNNST 266 Query: 187 TLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 P + + + + G + G + Sbjct: 267 QGPWWGNNSTEGPWWGNNSTEGPWLGNTTTQGPWWGNTTTQGPWWGNNSTQGPWWGNNST 326 Query: 247 DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 + ++ + + Sbjct: 327 EGPWWGNNSTEGPWWGNNSTEGPWWGNNSTEGPWWGNTTTQGPWWGNTTTQGPWWGNTTT 386 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHI 336 + T + P Sbjct: 387 QGPWWGNTTTQGPWWGNTTTQGPWWGNTTT 416 >gi|269965523|ref|ZP_06179641.1| biosynthetic arginine decarboxylase [Vibrio alginolyticus 40B] gi|269829886|gb|EEZ84117.1| biosynthetic arginine decarboxylase [Vibrio alginolyticus 40B] Length = 640 Score = 37.5 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 110/312 (35%), Gaps = 33/312 (10%) Query: 18 LEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVI 68 + +L A + P + + +AF+ ++ Y +K N + V+ Sbjct: 54 VNELEAKQLNLPVLVRFPQIVHQRVHGICHAFNQAIEEYQYPNKYLLVYPIKVNQQREVV 113 Query: 69 KTLAH-------LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + GL+ S+ EL LA ++ K + + LAL Sbjct: 114 DEILASQAQLETKQLGLEAGSKPELLAVLALAQQGSSVIVCNGYKDREYVRLALIGEKLG 173 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQI 178 V E + + K + R+ I + K ++G ++ KFG+ Q+ Sbjct: 174 HKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQV 233 Query: 179 HSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 S+ + + V H+GSQ+ I +LR+ G NI++ DVG Sbjct: 234 LSVIERLKREGNLDAMQLVHFHLGSQMANIRDVRNGVNESARFYCELRALGANIEYFDVG 293 Query: 238 GGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVG 284 GGL + Y ++YA I + II E GR L A Sbjct: 294 GGLAVDYDGTRSQSSNSMNYGLAEYARNIVNTVGDVCLQYEQPMPVIISESGRSLTAHHA 353 Query: 285 ILVTKVISIKKS 296 +L++ VI + Sbjct: 354 VLISNVIGTESY 365 >gi|91228096|ref|ZP_01262138.1| arginine decarboxylase [Vibrio alginolyticus 12G01] gi|91188214|gb|EAS74514.1| arginine decarboxylase [Vibrio alginolyticus 12G01] Length = 640 Score = 37.5 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 110/312 (35%), Gaps = 33/312 (10%) Query: 18 LEKL-AHVVQTPFYCYSTTAIEKNYLTFSNAFDGM--------DTMVCYALKANSNQAVI 68 + +L A + P + + +AF+ ++ Y +K N + V+ Sbjct: 54 VNELEAKQLNLPVLVRFPQIVHQRVHGICHAFNQAIEEYQYPNKYLLVYPIKVNQQREVV 113 Query: 69 KTLAH-------LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 + GL+ S+ EL LA ++ K + + LAL Sbjct: 114 DEILASQAQLETKQLGLEAGSKPELLAVLALAQQGSSVIVCNGYKDREYVRLALIGEKLG 173 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDI---NANTHKKISTGKKEDKFGIPIHQI 178 V E + + K + R+ I + K ++G ++ KFG+ Q+ Sbjct: 174 HKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQV 233 Query: 179 HSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 S+ + + V H+GSQ+ I +LR+ G NI++ DVG Sbjct: 234 LSVIERLKREGNLDAMQLVHFHLGSQMANIRDVRNGVNESARFYCELRALGANIEYFDVG 293 Query: 238 GGLGIAYHSDH------RPPSSSDYASLI-------HQYFGNLQCKIILEPGRFLVADVG 284 GGL + Y ++YA I + II E GR L A Sbjct: 294 GGLAVDYDGTRSQSSNSMNYGLAEYARNIVNTVGDVCLQYEQPMPVIISESGRSLTAHHA 353 Query: 285 ILVTKVISIKKS 296 +L++ VI + Sbjct: 354 VLISNVIGTESY 365 >gi|291239496|ref|XP_002739660.1| PREDICTED: EGF-like domain-containing protein-like [Saccoglossus kowalevskii] Length = 2641 Score = 37.5 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 18/272 (6%), Positives = 46/272 (16%), Gaps = 12/272 (4%) Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D +S L + ++ C Sbjct: 312 CDCISGYGLAADGTSCTDDNECNMFINECAHFCVNTMGSYHCSCLMGYKIDIDGKTCIDV 371 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + ++ +F + + + G + Sbjct: 372 DECAWS---SCQHVCTNTPGSYVCSCYPGYSMEFDG--YTCSDINECLTNNGGCDQLCEN 426 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 + + Q G I +D + Sbjct: 427 TDGSYNCHCEPGMEATDANTCIDVDECAVDQPCNQVCINTVGSYICMCNDGYHIIDTQCV 486 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 + N C+ + + + + +D Sbjct: 487 DIDECLTSNGGCEYTCQNTQG----SFECSCNIGFVLDPNGADCNDIDECTVGSAGCEHQ 542 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 E ++ + D+ G C D Sbjct: 543 CDNTEGSFTCTCNTGYIL---DVNGNTCSDID 571 >gi|170040925|ref|XP_001848232.1| malate dehydrogenase [Culex quinquefasciatus] gi|167864532|gb|EDS27915.1| malate dehydrogenase [Culex quinquefasciatus] Length = 637 Score = 37.5 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 28/286 (9%), Positives = 55/286 (19%), Gaps = 16/286 (5%) Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G L S EL A R + + K + E + S L Sbjct: 182 GCRLSCASMEELHAHFKAVHAPTRTPSADIKKGLQECSQCYKLIRSKNTHRPRSLRCKLC 241 Query: 135 QRAVSLGKKAPIAFRVNPDINA-NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKI 193 S A + ++ K + + + +L + + LP + Sbjct: 242 GEMFSKWYGATLHYKNKHRPGKRPEPKICCGCHERFQTTPELKIHANLTHFPNRLPHDEK 301 Query: 194 SGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG-----GLGIAYHSDH 248 I + + + + + L Sbjct: 302 RPFVCEICYKNYPDHTGLHQHQRRLAKDSKPHQCTQCERSFHFLNALRDHELMHKQEKTL 361 Query: 249 RPPSSSDYASLIH----QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVIL 304 P H + + + + Sbjct: 362 PCPKCPALFITQHSLRKHIARHEMPPTKFQCATCAKCFKSQKSLREHGYVAHTGERPHKC 421 Query: 305 DVAMNDFMRPTLYDAYHEINY------IVNPAGDRLHIHADIVGPI 344 F R Y A+ + G+R + G Sbjct: 422 AHCEASFARYDCYRAHVRGMHQEQQQDQQQQQGERDVHECRVCGKT 467 >gi|238024453|ref|YP_002908685.1| hypothetical protein bglu_2g10490 [Burkholderia glumae BGR1] gi|237879118|gb|ACR31450.1| Hypothetical protein bglu_2g10490 [Burkholderia glumae BGR1] Length = 376 Score = 37.5 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 8/65 (12%), Positives = 20/65 (30%), Gaps = 1/65 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TP + +N + + +K + V+ G+ G+ + + E Sbjct: 8 TPAALIDVARMNRNIERMQQRMNALGVNFRPHIKTSKCAPVVTAQLEAGARGITVSTLKE 67 Query: 86 LRRAL 90 + Sbjct: 68 AEQFF 72 >gi|183227667|dbj|BAG24498.1| D-threo-3-hydroxyaspartate dehydratase [Delftia sp. HT23] Length = 380 Score = 37.5 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP +++N D + +K + + V A SG+ + + E Sbjct: 10 TPAAVIDLDRMQRNIARMQQRMDAQGVRLRPHVKTSKSVPVAAAQRAAGASGITVSTLKE 69 Query: 86 LRRALAA 92 + AA Sbjct: 70 AEQFFAA 76 >gi|145248876|ref|XP_001400777.1| hypothetical protein ANI_1_1146124 [Aspergillus niger CBS 513.88] gi|134081450|emb|CAK46463.1| unnamed protein product [Aspergillus niger] Length = 455 Score = 37.5 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 16/47 (34%) Query: 28 PFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHL 74 P I+++ + +A +D +K + V + A Sbjct: 29 PAVVLDVAIIKRHCASMLDAVKALDVGFRAHVKTHKTPQVARLQAGE 75 >gi|160896420|ref|YP_001562002.1| alanine racemase domain-containing protein [Delftia acidovorans SPH-1] gi|160362004|gb|ABX33617.1| alanine racemase domain protein [Delftia acidovorans SPH-1] Length = 380 Score = 37.5 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 1/67 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV-IKTLAHLGSGLDIVSEGE 85 TP +++N D + +K + + V A SG+ + + E Sbjct: 10 TPAAVIDLDRMQRNIARMQQRMDAQGVRLRPHVKTSKSVPVAAAQRAAGASGITVSTLKE 69 Query: 86 LRRALAA 92 + AA Sbjct: 70 AEQFFAA 76 >gi|115644466|ref|XP_783502.2| PREDICTED: similar to NFX1-type zinc finger-containing protein 1 [Strongylocentrotus purpuratus] gi|115930077|ref|XP_001178906.1| PREDICTED: similar to NFX1-type zinc finger-containing protein 1 [Strongylocentrotus purpuratus] Length = 1715 Score = 37.5 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 16/263 (6%), Positives = 39/263 (14%), Gaps = 17/263 (6%) Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 G + L + + K ++ + E L + Sbjct: 1109 GHMHALLCSESIDNFRCNTITRKNRSCGHEIMEKCCHNSKCSELVEKTLLCGHKFEMKCS 1168 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 + V T K+ + + Sbjct: 1169 TEVETVVCEAKCGKQLPCDHTCKQRCGVDCTENCTEMITRE-------DWPCGHKVTVKC 1221 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 D+ ++ + A + + + + Sbjct: 1222 CDESDACYIACEEILMCGHKCKGTCGKCSQGRYHHPCIETCKKKLVCGHECALNCGAPCL 1281 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 +C S + Sbjct: 1282 SCEKKCPRRCRHS---------QCKHPCSEPCDVCTKRCNWKCKHYECKTLCCEPCDRPP 1332 Query: 324 NYIVNPAGDRLHIHAD-IVGPIC 345 P + + G IC Sbjct: 1333 CNKPCPKKRKCGHPCIGLCGEIC 1355 >gi|292618089|ref|XP_001922524.2| PREDICTED: wu:fc33e05 [Danio rerio] Length = 1120 Score = 37.5 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 15/274 (5%), Positives = 34/274 (12%), Gaps = 17/274 (6%) Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S + + + + Sbjct: 129 GADCSSA----------CDRDHWGPHCSSRCQCKNEALCNPITGACICAPGYHGWRCEDL 178 Query: 137 AVSLGKKAPIA--FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + Sbjct: 179 CDHSTYGNNCQQKCLCQNNATCHHITGECVCSPGYTGAFCEDLCPPGKHGQQCEERCPCQ 238 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + + R + Q G + + SS Sbjct: 239 NGGVCHHVTGECSCPAGWMGMVCGQPCPTGRFGKNCSQECQCHNGGICSPSTGQCVCSSG 298 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 I V + + + D Sbjct: 299 YTGERCQDQCQVGTYGIGCSQACRCVNGAQCYHVSGACLCEQGYTGESCEERICPDGQYG 358 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 D N + + C++G Sbjct: 359 LKCDRKCPCNTNNTRSCHPMSGECS-----CQSG 387 >gi|322382485|ref|ZP_08056373.1| alanine racemase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153547|gb|EFX45943.1| alanine racemase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 395 Score = 37.1 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 43/348 (12%), Positives = 90/348 (25%), Gaps = 23/348 (6%) Query: 28 PFYC-YSTTAIEKNYLTFSNAFDGMDTMVCYALKA----NSNQAVIKTLAHLGS-GLDIV 81 P + S A+ N F A + +KA + ++ + G+ L + Sbjct: 7 PTWVEVSLDALSGNLQAFRQALPDS-IRIMAVVKADAYGHGAASIAREAIASGADHLAVA 65 Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 E + A + A +V L + E+ + Sbjct: 66 FLDEALQLREAGISAPILVLGYTAPDG----LEMALKNNITLTVFNEEMLRGMELLQGQA 121 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 + RV+ +++ H+ ++E L A + Sbjct: 122 EALDKRLRVHVKVDSGMHRIGLYKEEEAV--------SYLKQIARMPHICLEGLFTHYAC 173 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 + ++ + +++ G +I +I G + + ++ Sbjct: 174 ADEADKAYTRLQYEKFSRVVHEVKRLGIDIPYIHAGNSAAAIDTPELVYNMARLGIAMYG 233 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISI-KKSADKTFVILDVAMNDFMRPTLYDAY 320 Y I++ + ++ K +S + T P Y Sbjct: 234 LYPSEKVDHTIIKLEPVMSLKTRMIHDKWLSEGSGISYGTIYHTKGEERIGTLPIGYADG 293 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK-IALPRPGDLLY 367 IVG IC D LN + GD + Sbjct: 294 FSRMLSTKANALIRGKRVPIVGRIC--MDQCMLNITGVPEAEAGDEVV 339 >gi|302836975|ref|XP_002950047.1| hypothetical protein VOLCADRAFT_90489 [Volvox carteri f. nagariensis] gi|300264520|gb|EFJ48715.1| hypothetical protein VOLCADRAFT_90489 [Volvox carteri f. nagariensis] Length = 419 Score = 37.1 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 13/45 (28%), Gaps = 2/45 (4%) Query: 21 LAHVVQTPFYCYSTTAIEKNYLTFSNAFDG-MDTMVCYALKANSN 64 LA V TP +E+N + KA+ Sbjct: 28 LAD-VDTPALLVDLDVVERNCEKLRRTMAAYPGVAIRPHAKAHKC 71 >gi|291225862|ref|XP_002732917.1| PREDICTED: zonadhesin-like, partial [Saccoglossus kowalevskii] Length = 8884 Score = 37.1 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 27/283 (9%), Positives = 49/283 (17%), Gaps = 11/283 (3%) Query: 80 IVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVS 139 V E V + +T ++ + VS Sbjct: 838 CVPPSECTCTYMGKVYSATQQIERSCQTCTCNGGQWDCLGEMCEQKTICPGNKVYSEFVS 897 Query: 140 LGKKAPIAFRVNPDINANTHK-KISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 D A+T + + Sbjct: 898 PCPLTCENVDNYQDCGASTFPGCTCPEDTALDMQTDSCVKPDQCPCRHNGKRYEAGAIID 957 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYAS 258 + I+ Q + + + D G H S D A Sbjct: 958 KDCNVCQSIQCEEGYVYEACGPMCQPTCDDIDEELPDACSGCLEGCHCPTGTVSQGD-AC 1016 Query: 259 LIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 + G + A+ + + Sbjct: 1017 IPVDQCPCKHNGASYPEGTVIHANCMNCTCNNGRFDCMGESCHEKTCLPGEFTCGNGRCI 1076 Query: 319 AYHEINYIVNPAGDRLHIHADIVGPICE-------TGDFIALN 354 + N D + CE +GD +A N Sbjct: 1077 PGRWVCDGGNDCHDGSDETECV--HTCEENQFTCTSGDCVAQN 1117 >gi|146298434|ref|YP_001193025.1| alanine racemase domain-containing protein [Flavobacterium johnsoniae UW101] gi|146152852|gb|ABQ03706.1| alanine racemase domain protein [Flavobacterium johnsoniae UW101] Length = 371 Score = 37.1 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 15/145 (10%), Positives = 41/145 (28%), Gaps = 2/145 (1%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSEGE 85 TPF I N + G + +K + +++ + + E Sbjct: 16 TPFLAVYEDRIRFNLERLIRSVSGDTQKLRPHIKTHKIGEILELFKIYNIKKIKCATIAE 75 Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 A + + ++ E ++L + + + K+ Sbjct: 76 AELAAIHEI-PDVLLAYQPVGIKKERWISLLQKYPDTYFSTIVDNLESAKALNETAKENN 134 Query: 146 IAFRVNPDINANTHKKISTGKKEDK 170 + V D+N ++ + ++ Sbjct: 135 LKLNVYLDLNTGMNRTGFSISQDWT 159 >gi|115728495|ref|XP_795915.2| PREDICTED: similar to NFX1-type zinc finger-containing protein 1 [Strongylocentrotus purpuratus] gi|115936340|ref|XP_001177457.1| PREDICTED: similar to NFX1-type zinc finger-containing protein 1 [Strongylocentrotus purpuratus] Length = 2956 Score = 37.1 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 16/274 (5%), Positives = 42/274 (15%), Gaps = 19/274 (6%) Query: 88 RALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIA 147 A E I K T + + + Sbjct: 2322 CQAACHKDPEDIRCKENVKKTLPCGHTHTLLCSASIDNVRCNTIT-RKSRLCGHEIIEKC 2380 Query: 148 FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQI 207 + + + + + LP I + + Sbjct: 2381 CHNSKCSEVVEKTLPCGHNLKMICSTEVETVVCKARCSKELPCGHICKERCGVDCTENCT 2440 Query: 208 ES-----FHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 E + ++ + + + I + G + Sbjct: 2441 EMITRDDWPCGHEVTVKCCDESDACYIACEEILICGHKCKGTCGKCSQGRYHHPCIETCK 2500 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + L+ G ++ + + Sbjct: 2501 KKLVCGHECALKCGAPCLS--CKMKCLRRCRHSQCKHPCSEPCDVCTKRCNWKCEHHECK 2558 Query: 323 INYIVNPAGDRLHIHAD-----------IVGPIC 345 + + G IC Sbjct: 2559 TLCCEPCDRPPCNKPCSKKRKCGHPCIGLCGEIC 2592 >gi|307170677|gb|EFN62845.1| Putative protein tag-53 [Camponotus floridanus] Length = 1152 Score = 37.1 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 21/270 (7%), Positives = 43/270 (15%), Gaps = 8/270 (2%) Query: 81 VSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSL 140 S E R + + S + T + Sbjct: 593 SSGTECHRLHTCHACVTNSRCYWSWSNGPDRCKLQRENSMMSPNGSYTSAVTSSSTTDMC 652 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 A I + + + T + + Sbjct: 653 RYNACIEYTTCRNCTEGDCIWCQNEARCVDKNAYPASFPYGQCREWTTIEARCRPTETG- 711 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + A + + + GG + Sbjct: 712 --KDWCNFYSSCAACRSDPGCGWCDDGSGTGKGVCLPGGASGPSSKSLETCPFEHWYFTK 769 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 L + G L K + + + Sbjct: 770 CPTCQCNGHSKCLPNSSVCIQPCGNLTYGPHCDKCISG-----YYGSPLNGATCQPCSCN 824 Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDF 350 ++ + G I+G CE D Sbjct: 825 NQGTQCTSETGKCFCTTKGIIGDHCERCDV 854 >gi|283797687|ref|ZP_06346840.1| alanine racemase [Clostridium sp. M62/1] gi|291074583|gb|EFE11947.1| alanine racemase [Clostridium sp. M62/1] Length = 422 Score = 37.1 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 16/49 (32%), Gaps = 5/49 (10%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANS----NQAVIKTLAHLGS 76 I N+ + G + A+KAN+ + L G+ Sbjct: 14 IDLDTIRSNFAALRS-MAGPGIKIMPAVKANAYGHGIVESCRALEQAGA 61 >gi|327280230|ref|XP_003224855.1| PREDICTED: protein eyes shut homolog [Anolis carolinensis] Length = 3275 Score = 37.1 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 25/264 (9%), Positives = 59/264 (22%), Gaps = 6/264 (2%) Query: 86 LRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAP 145 L P G T ++ ++ + C + + ++ + Sbjct: 985 LHGGSCFNHPGGYQCVCAPGFTGNQCEVDID---ECTSAPCLNNGSCVDDISFYKCYCRS 1041 Query: 146 IAFRVNPDINANTH---KKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 +N +INA+ + G H + + + V G Sbjct: 1042 GFLGINCEINADECSSAPCHHGRCIDLVDGYQCHCEAGWTSSRCEIDIHECESVPCLNGG 1101 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQ 262 + + + L + + + L P + Y Sbjct: 1102 SCQDLVNAFECICLSGYTGEFCEVDIDVCVEPLLNSSLCFNGGKCVDGPGRTFYCRCPDG 1161 Query: 263 YFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHE 322 + G+ I E + + + + + + + Sbjct: 1162 FSGHFCEIDINECSSSPCLHDSVCEDLINGYFCRCQRGWEGFYCEDDINECASNPCIHGI 1221 Query: 323 INYIVNPAGDRLHIHADIVGPICE 346 G + VG CE Sbjct: 1222 CTQKEPGLGYTCYCDPGFVGQSCE 1245 >gi|194674113|ref|XP_873582.3| PREDICTED: multiple epidermal growth factor-like domains 6-like [Bos taurus] gi|297484172|ref|XP_002694223.1| PREDICTED: multiple epidermal growth factor-like domains 6-like [Bos taurus] gi|296479127|gb|DAA21242.1| multiple epidermal growth factor-like domains 6-like [Bos taurus] Length = 1517 Score = 37.1 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 24/283 (8%), Positives = 41/283 (14%), Gaps = 17/283 (6%) Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D VS A R + + S T Sbjct: 876 GCDAVSG---LCVCEAGYVGPRCEQRCPQGYFGPGCGRQCQCEHGAACDHVSGACTCPAG 932 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + + + + G + + + G Sbjct: 933 WRGTFCERACPAGFFGVDCGHACDCSAGVPCDPVSGSCLCPSGRQGPRCAQTCPAHMFGH 992 Query: 197 DMHIGSQIDQIESFHKAFKLLRDLTQQ-------------LRSNGHNIQHIDVGGGLGIA 243 + S R + + GG Sbjct: 993 NCSQACSCFNGASCDPVHGQCRCGPGWTGPTCLQACPEGLYGEDCQHSCLCQNGGSCDPV 1052 Query: 244 YHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVI 303 P + A G + G + Sbjct: 1053 SGHCTCPEGWAGLACEKECLPGVFEVGCPHSCGCLNGGLCDPHTVHCLCPAGWTGDKCQS 1112 Query: 304 LDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + G+ H GP CE Sbjct: 1113 SCPPSWFGEACAQRCQCPPGAACHHVTGEC-HCPPGFTGPSCE 1154 >gi|326926867|ref|XP_003209618.1| PREDICTED: multiple epidermal growth factor-like domains protein 11-like [Meleagris gallopavo] Length = 1077 Score = 37.1 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 22/250 (8%), Positives = 43/250 (17%), Gaps = 20/250 (8%) Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 G D S ++ + + + + + Sbjct: 160 GTDCSSG----------CDSDHWGPHCSNRCQCQNEALCNPITGACVCADGYQGWRCEEL 209 Query: 137 A----VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 G + + T + F + S A + Sbjct: 210 CEPGSYGKGCQFQCQCHNGATCDHETGECHCAPGYTGVFCEELCPPGSHGAQCELRCPCQ 269 Query: 193 ISGVDMHIGSQIDQIESFHKAFKL------LRDLTQQLRSNGHNIQHIDVGGGLGIAYHS 246 GV HI + + + HN H D G I Sbjct: 270 NGGVCHHITGECSCPAGWTGLVCAQPCPPGTFGINCSQDCPCHNRGHCDPVTGKCICTPG 329 Query: 247 DHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 + + +C + V + I Sbjct: 330 YIGDRCQEECPIGTFGFQCTQRCDCQNGAKCYHVNGACMCDPGFKGIHCQERMCPEGFYG 389 Query: 307 AMNDFMRPTL 316 + P Sbjct: 390 LKCNKRCPCN 399 Score = 36.7 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 24/277 (8%), Positives = 42/277 (15%), Gaps = 7/277 (2%) Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S G P P + + + + Sbjct: 539 DGFCLCSPGWQGDYCDQPCPDGTYGLNCSERCDCNHADGCDPVTGYCCCLAGWTGIHCDN 598 Query: 136 RAVSLGKKAPIAFRVNPDINA------NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 + + + T + I + + Sbjct: 599 MCTQGRWGPNCSISCSCENGGSCSPEDGTCDCAPGYRGPLCQRICPPGFYGHHCSQPCPQ 658 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 V SG H+ D + F + + N + G S Sbjct: 659 CVHSSGPCHHVSGHCDCLPGFFGTLCNQVCPSGKYGKNCAELCQCTENGTCNPIDGSCQC 718 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 P G A + A Sbjct: 719 FPGWIGKDCSQTCPPGFWGTDCFHSCNCHNGAMCSPYDGECRCTHGWTGLYCTQRCPAAF 778 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + G G CE Sbjct: 779 YGKNCANVCQCQNGADCDHVTGQCTCRTG-FTGKQCE 814 >gi|149236886|ref|XP_001524320.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146451855|gb|EDK46111.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 1082 Score = 37.1 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 58/210 (27%), Gaps = 22/210 (10%) Query: 29 FYC--YSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS---- 82 Y +E++ V YA K SN ++IK L G + + Sbjct: 863 LYIQQMDVAEVERHCR------------VYYAKKQISNISIIKELTKRDQGFEASAKIEK 910 Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSG----IYCFNVESESELKTLNQRAV 138 EL + P+E+I+ T+ ++ + ++ E K + Sbjct: 911 AIELINNIQQANPSEKIIIFSQFTTLFDLMKLVLDHLKILHLRYDGSMTVEAKNNVIKQF 970 Query: 139 SLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDM 198 + + T + D F P + ++ ++ + Sbjct: 971 YQSNCNVLLLSLRAGNVGLTLTCANHVIIMDPFWNPFVEEQAMDRAHRIGQEKEVHVHRV 1030 Query: 199 HIGSQIDQIESFHKAFKLLRDLTQQLRSNG 228 I + ++ + K + Sbjct: 1031 LITNTVESRIMELQERKKELIGDALNENEM 1060 >gi|114601457|ref|XP_517907.2| PREDICTED: multiple EGF-like-domains 10 isoform 4 [Pan troglodytes] gi|114601459|ref|XP_001158953.1| PREDICTED: multiple EGF-like-domains 10 isoform 3 [Pan troglodytes] Length = 1140 Score = 37.1 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 19/279 (6%), Positives = 44/279 (15%), Gaps = 22/279 (7%) Query: 89 ALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAF 148 A E+ ++ + + + + + Sbjct: 76 YRTAYRHGEKTMYRRKSQCCPGFYESGEMCVPHCADKCVHGRCIAPNTCQCEPGWGGTNC 135 Query: 149 RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYA---YASTLPGVKISGVDMHIGSQID 205 D + S + ++ A G + Q Sbjct: 136 SSACDGDHWGPHCTSRCQCKNGALCNPITGACHCAAGFRGWRCEDRCEQGTYGNDCHQRC 195 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFG 265 Q ++ + + + G G + R P + Sbjct: 196 QCQNGATCDHVTGGCRCPPGYTRAFCEDLCPPGKHGPQC--EQRCPCQNGGVCHHVTGEC 253 Query: 266 NLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN- 324 + + + + T + T E Sbjct: 254 SCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATGQCHCSPGYTGERCQDECPV 313 Query: 325 --------YIVNPAGDRLHIHAD--------IVGPICET 347 H G CE Sbjct: 314 GTYGVLCAETCQCVNGGKCYHVSGACLCEAGFAGEHCEA 352 >gi|312081500|ref|XP_003143054.1| multiple epidermal growth factor-like domains 6 [Loa loa] gi|307761784|gb|EFO21018.1| multiple epidermal growth factor-like domains 6 [Loa loa] Length = 956 Score = 37.1 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 19/284 (6%), Positives = 47/284 (16%), Gaps = 10/284 (3%) Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 G + + L + + + K I G C V Sbjct: 614 YGVLCEKMCPTGLYGPNCQHECSCKNNGTCNSKDGSCICPPGYYGAACSEVCPSHRFGLN 673 Query: 134 NQRAVSLGKKAPIA-----FRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTL 188 + A + + Sbjct: 674 CMQRCDCHNGADCDPSNGSCKCLTGWSGQKCDIPCPEGYFGINCSERCNCDQGVQCDPID 733 Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 ++ E + + + + + G + Sbjct: 734 GECTCPTGHHGKNCELRCEEGYFGDRCKGICICRNNATCDPTNGACNCKPGWRGQHCDRP 793 Query: 249 RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P + + V + + + + + Sbjct: 794 CPDGRYGDGCKKVCDCSSFDDTEMA----LFVLKCHPVTGECLCKEGWTGSNCRTPCPSN 849 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIA 352 + + G+ A +GP CE G+ Sbjct: 850 SWGIGCKEECQCMNGGICDRFTGNCD-CPAGFMGPHCEEGESFI 892 >gi|301780748|ref|XP_002925791.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5-like [Ailuropoda melanoleuca] Length = 3514 Score = 37.1 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 22/317 (6%), Positives = 46/317 (14%), Gaps = 24/317 (7%) Query: 39 KNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLG--SGLDIVSEGELRRALAAPVPA 96 + + F G CY + + S + + G D S + P Sbjct: 389 ERCDACAEGFAGFPR--CYPVPSFSPNGTGEQVLPAGQIVNCDC-SAAGTQGNACRKDPR 445 Query: 97 ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA 156 G +L + + Sbjct: 446 LGRCVCKPGFQGTHCELCAPGFYGPGCQPCQCSSPGVADGDCDRDSGQCTCREGFEGATC 505 Query: 157 NTH-KKISTGKKEDKFGIPI--HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKA 213 + G + G +A Sbjct: 506 DHCAPGYFHFPLCQLCGCSPAGTLPEGCDEAGRCSCRPEFDGPHCDRCRPGHHGYPNCRA 565 Query: 214 FKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIIL 273 + + GG + Sbjct: 566 C---------TCDPRGTLDQLCGAGGTCHCRPGYTGAACQE---CSPGFHGFPDCAPCHC 613 Query: 274 EPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDR 333 L A + + +F + + + Sbjct: 614 STEGSLHASCDPRSGQCSCRPRVTGLRCDTCVPGAYNFPSCEAGSCHPAGLAPADHSLPE 673 Query: 334 LHIHAD----IVGPICE 346 + GP C+ Sbjct: 674 AQAPCTCRAHVEGPSCD 690 >gi|53850108|emb|CAH59726.1| soxG [Pseudaminobacter salicylatoxidans] Length = 310 Score = 37.1 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 5/36 (13%) Query: 349 DFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNS 384 D + + + + R GD L I GA + S Sbjct: 80 DMLTPDCNVTILRRGDKLVIFDVGA-----GSNFLS 110 >gi|176838325|dbj|BAB47410.2| MEGF11 protein [Homo sapiens] Length = 974 Score = 37.1 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 28/263 (10%), Positives = 46/263 (17%), Gaps = 10/263 (3%) Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E G + G +C N N + A Sbjct: 36 ECVHGRCVSPDTCHCEPGWGGPDCSSGCDSDHWGPHCSNRCQCQNGALCNPITGACVCAA 95 Query: 145 PIAFRVNPDINA-NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 ++ A TH K + + G A G + Sbjct: 96 GFRGWRCEELCAPGTHGKGCQLPCQCRHGASCDPRAGECLCAP--------GYTGVYCEE 147 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + S +L + + G A + PP + Sbjct: 148 LCPPGSHGAHCELRCPCQNGGTCHHITGECAC-PPGWTGAVCAQPCPPGTFGQNCSQDCP 206 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + + A + S N A Sbjct: 207 CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQRCDCHNGGQCSPTTGACECE 266 Query: 324 NYIVNPAGDRLHIHADIVGPICE 346 P + GP C Sbjct: 267 PGYKGPRCQERLCPEGLHGPGCT 289 >gi|119598162|gb|EAW77756.1| MEGF11 protein, isoform CRA_c [Homo sapiens] gi|119598163|gb|EAW77757.1| MEGF11 protein, isoform CRA_c [Homo sapiens] Length = 969 Score = 37.1 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 28/263 (10%), Positives = 46/263 (17%), Gaps = 10/263 (3%) Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E G + G +C N N + A Sbjct: 31 ECVHGRCVSPDTCHCEPGWGGPDCSSGCDSDHWGPHCSNRCQCQNGALCNPITGACVCAA 90 Query: 145 PIAFRVNPDINA-NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 ++ A TH K + + G A G + Sbjct: 91 GFRGWRCEELCAPGTHGKGCQLPCQCRHGASCDPRAGECLCAP--------GYTGVYCEE 142 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + S +L + + G A + PP + Sbjct: 143 LCPPGSHGAHCELRCPCQNGGTCHHITGECAC-PPGWTGAVCAQPCPPGTFGQNCSQDCP 201 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + + A + S N A Sbjct: 202 CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQRCDCHNGGQCSPTTGACECE 261 Query: 324 NYIVNPAGDRLHIHADIVGPICE 346 P + GP C Sbjct: 262 PGYKGPRCQERLCPEGLHGPGCT 284 >gi|295115115|emb|CBL35962.1| Alanine racemase [butyrate-producing bacterium SM4/1] Length = 155 Score = 37.1 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 11/31 (35%), Gaps = 1/31 (3%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKAN 62 I N+ + G + A+KAN Sbjct: 14 IDLDTIRSNFAALRS-MAGPGIKIMPAVKAN 43 >gi|118376506|ref|XP_001021435.1| La domain containing protein [Tetrahymena thermophila] gi|89303202|gb|EAS01190.1| La domain containing protein [Tetrahymena thermophila SB210] Length = 2252 Score = 36.7 bits (83), Expect = 6.4, Method: Composition-based stats. Identities = 30/292 (10%), Positives = 59/292 (20%), Gaps = 12/292 (4%) Query: 64 NQAVIKTLAHLGSGLDIVS--EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYC 121 NQ + ++ + E + + + + D S Sbjct: 1535 NQFISNLMSCSLCHFSCATCDGFEAHNCITCLSSRKYNSVTSTCECKDGTYEDDASQNCF 1594 Query: 122 FNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 S + + ++ FR + +K F Sbjct: 1595 KCHYSCFKCNGPFESDCIECPQSSTTFRCTCAPGYFDVTQQQICQKW--FASNCQSCQVT 1652 Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 + I Q + H K + T+ + Sbjct: 1653 MNRVLSSINTCICSSGYFDDGFNFQCQKCHYTCKKCINGTKSGCIECPDNSFRYSSYKTL 1712 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPG--------RFLVADVGILVTKVISI 293 +S + Y I+ G V + IS Sbjct: 1713 TVDNSFECLCNERYYDDGINPVCQKCHYSCKNCIGPKNTDCIQCDQVIVYQRMFIANISS 1772 Query: 294 KKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 S+ +D +D ++ I D+VG C Sbjct: 1773 PISSTGICQCVDGYFDDLTNILCQKCPYQCKTCDIQKCLTCDITRDLVGMTC 1824 >gi|224536585|ref|ZP_03677124.1| hypothetical protein BACCELL_01460 [Bacteroides cellulosilyticus DSM 14838] gi|224521841|gb|EEF90946.1| hypothetical protein BACCELL_01460 [Bacteroides cellulosilyticus DSM 14838] Length = 310 Score = 36.7 bits (83), Expect = 6.4, Method: Composition-based stats. Identities = 17/211 (8%), Positives = 41/211 (19%), Gaps = 4/211 (1%) Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + I + A + E+ F + K V Sbjct: 1 MIKNLFCFLICIWQCLHVPAQFPETDFQLSVENPFFSDKKWGGAADPVMVWNEHYKEWFV 60 Query: 197 DMHIGSQIDQIESFHKAF--KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + + ++ + + + + P Sbjct: 61 YYTQRRAYYDGQGVEWMHGSSIGIASSKDGKEWKYRGTCVGDENLTNKKHTQTWWAPEVI 120 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD--KTFVILDVAMNDFM 312 L+H + + + + + + I Sbjct: 121 VQDGLMHMFVTFVPGVYQDWNAKRFIKHFTSKEGMRWKYQSTLSLSTEHCIDAGVCKVRD 180 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGP 343 + L+ + A H D+VGP Sbjct: 181 KWLLWYKDEANDNHTWFAESTDLYHWDVVGP 211 >gi|1079423|pir||JP0076 nel protein - chicken Length = 835 Score = 36.7 bits (83), Expect = 6.4, Method: Composition-based stats. Identities = 21/230 (9%), Positives = 44/230 (19%), Gaps = 1/230 (0%) Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 E +T + + + + + Q Sbjct: 326 CCKECQSVCIFEGRTYFEGQRETVYSSSGDCVLFECKDHKMQRIPKDSCATLNCPES-QQ 384 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 I ++ G + +A RD + LR + + +D Sbjct: 385 IPLSHSCCKICKGHDFCTEGHNCMEHSVCRNLDDRAVCSCRDGFRALREDNAYCEDVDEC 444 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + ++ I + V + + Sbjct: 445 AEGQHYCRENTMCVNTPGSFMCICKTGYIRIDDYSCTEHDECVTNQHNCDENALCFNTVG 504 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 V + + N A + GP CET Sbjct: 505 GHNCVCKLGYTGNGTVCKAFCKDGCRNGGACIASNVCACPQGFTGPSCET 554 >gi|302558711|ref|ZP_07311053.1| amino acid aldolase [Streptomyces griseoflavus Tu4000] gi|302476329|gb|EFL39422.1| amino acid aldolase [Streptomyces griseoflavus Tu4000] Length = 421 Score = 36.7 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 20/72 (27%), Gaps = 8/72 (11%) Query: 13 AENVSLEKLAHV--------VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSN 64 AE +++ +LA TP S +E N K + Sbjct: 25 AEGLTVGELAAQRRNLFTDGFTTPVLALSAERLEHNLRLMETYAARHGLAFAPHGKTSMA 84 Query: 65 QAVIKTLAHLGS 76 + + G+ Sbjct: 85 PQLFRRQIEHGA 96 >gi|221042626|dbj|BAH12990.1| unnamed protein product [Homo sapiens] Length = 815 Score = 36.7 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 25/251 (9%), Positives = 49/251 (19%) Query: 97 ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINA 156 E ++ + + + V + Sbjct: 303 ETLICPNPDCPLKSALAYVDGKCCKECKSICQFQGRTYFEGERNTVYSSPGVCVLYECKD 362 Query: 157 NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKL 216 T K + + HQI ++ G + +A Sbjct: 363 QTMKLVESSGCPALDCPESHQITLSHSCCKVCKGYDFCSERHNCMENSICRNLNDRAVCS 422 Query: 217 LRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPG 276 RD + LR + + ID D ++ I + Sbjct: 423 CRDGFRALREDNAYCEDIDECAEGRHYCREDTMCVNTPGSFMCICKTGYIRIDDYSCTEH 482 Query: 277 RFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHI 336 + + + V + + N A + Sbjct: 483 DECITNQHNCDENALCFNTVGGHNCVCKPGYTGNGTTCKAFCKDGCRNGGACIAANVCAC 542 Query: 337 HADIVGPICET 347 GP CET Sbjct: 543 PQGFTGPSCET 553 >gi|326911451|ref|XP_003202072.1| PREDICTED: protein NEL-like [Meleagris gallopavo] Length = 786 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 22/230 (9%), Positives = 44/230 (19%), Gaps = 1/230 (0%) Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 E +T + + + + + Q Sbjct: 296 CCKECQSVCIFEGRTYFEGQRETVYSSSGDCVLFECKDHKMQRIPKDSCATLNCPES-QQ 354 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 I ++ G + +A RD + LR + + ID Sbjct: 355 IPLSHSCCKICKGHDFCTEGHNCMEHSVCRNLDDRAVCSCRDGFRALREDNAYCEDIDEC 414 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + ++ I + V + + Sbjct: 415 AEGQHYCRENTMCVNTPGSFMCICKTGYIRIDDYSCTEHDECVTNQHNCDENALCFNTVG 474 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 V + + N A + GP CET Sbjct: 475 GHNCVCKLGYTGNGTVCKAFCKDGCRNGGACIASNVCACPQGFTGPSCET 524 >gi|221041854|dbj|BAH12604.1| unnamed protein product [Homo sapiens] Length = 577 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 17/166 (10%), Positives = 34/166 (20%) Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 ++ G + +A RD + LR + + ID Sbjct: 388 HSCCKVCKGYDFCSERHNCMENSICRNLNDRAVCSCRDGFRALREDNAYCEDIDECAEGR 447 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + ++ I + + + + Sbjct: 448 HYCRENTMCVNTPGSFMCICKTGYIRIDDYSCTEHDECITNQHNCDENALCFNTVGGHNC 507 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 V + + N A + GP CET Sbjct: 508 VCKPGYTGNGTTCKAFCKDGCRNGGACIAANVCACPQGFTGPSCET 553 >gi|195113625|ref|XP_002001368.1| GI10751 [Drosophila mojavensis] gi|193917962|gb|EDW16829.1| GI10751 [Drosophila mojavensis] Length = 1384 Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 27/272 (9%), Positives = 47/272 (17%), Gaps = 16/272 (5%) Query: 80 IVSEGELRRALAAPVP--AERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 + S E + A + A + + Sbjct: 832 VQSICEQLHSCRACMSNAACKWDAEQNRCRSHISASGAPYNRSTHDDNLCRPTCASQTNC 891 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + I + + +G T P +S Sbjct: 892 HNCTEDECIWCQNEQR-----CVDRNAYTASFPYGQCREWTTFTSKC-RTAPITALSAGS 945 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 S L + + V GG Y + + Sbjct: 946 TTALSSAQCGYYNSCQQCLDDPACGWCDNGSNTGLGKCVVGGALSPYDQTECALNHWFFT 1005 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 S E +++ I + + Y Sbjct: 1006 SCPRCNCNGHSSCNDQEHCEQPCSNLTIGAHCEKCRTGYWGNAINGGECQRCECNNQGDY 1065 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 N G IVG CE D Sbjct: 1066 CHPDTGKCYCNTKG--------IVGDHCEKCD 1089 >gi|290981792|ref|XP_002673615.1| Zinc-finger domain-containing protein [Naegleria gruberi] gi|284087200|gb|EFC40871.1| Zinc-finger domain-containing protein [Naegleria gruberi] Length = 1991 Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 25/319 (7%), Positives = 50/319 (15%), Gaps = 10/319 (3%) Query: 29 FYCYSTTAIEKNYLTFSNAFDGMDT--MV--CYALKANSNQAVIKTLAHLGSGLDIVSEG 84 Y + +N + F + + L + + + S D V Sbjct: 1470 LYIIGNHDLLRNNEDWRKVFARLKHSDRILDHLPL-SCPTHSEERECIREPSDFDGV-IW 1527 Query: 85 ELRRALAAPVPAERIVFSGVGKT---IDEIDLALQSGIYCFNVESESE-LKTLNQRAVSL 140 + + S E G + E + Sbjct: 1528 GGCKKPCTYRYPCGHICSLPCHHDSLHKERKCEKICGEKYEDCGHRCEDKCHHGKSCPKC 1587 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 K F + +T + + G+ G + Sbjct: 1588 KTKVDYKFVACGHVTKVACHLKNTTQLCKSTCNKLLGCGHNCRGQCGQCGLTGCGPCIAT 1647 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 + + R G G S + Sbjct: 1648 VKDYCETCKKPYERRCSEPRICTNRCTVKLSCGHACSGKCGECSTSGTHKVCGFKCERKL 1707 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320 P I K + + Sbjct: 1708 ICGHICKAKHTCSNPCPKCEEICKFKCFHNIQCKLACHEMCHKCKEPCPIQCPHRKCTNL 1767 Query: 321 HEINYIVNPAGDRLHIHAD 339 V P ++ Sbjct: 1768 CHELCNVEPCNEKCPNICS 1786 >gi|73964553|ref|XP_548004.2| PREDICTED: similar to Jagged-2 precursor (Jagged2) (HJ2) [Canis familiaris] Length = 1098 Score = 36.7 bits (83), Expect = 7.4, Method: Composition-based stats. Identities = 18/273 (6%), Positives = 43/273 (15%), Gaps = 11/273 (4%) Query: 84 GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143 + + + D + ++ + + + K Sbjct: 92 AHMELQIRVRCDDNYYSATCNKFCRPRNDFFGHYTCDQYGNKACMDGW-MGKECKEAVCK 150 Query: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 K + + + + + ++ Sbjct: 151 QGCNLLHGGCSVPGECKCSYGWQGRFCDECVPYPGCVHGSCVDPWQCNCETNWGGLLCNK 210 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 H H + G + + + Q Sbjct: 211 DLNYCGTHHPCTNGATCINAEPDQYHCVCPDGYSGKNCERVEHACASNPCAAGGTCVDQV 270 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 G G G K + ++ + Y Sbjct: 271 DGFECICPKQWVGTTCQLGKGPEGHWCAWTTPMNVKGSLCVNAFTGKNLIGGYYCLCIPG 330 Query: 324 NYIVNPA----------GDRLHIHADIVGPICE 346 VN G + G CE Sbjct: 331 WKGVNCHIIQYGGELMTGYQCVCPWGFGGRHCE 363 >gi|229167180|ref|ZP_04294921.1| Alanine racemase [Bacillus cereus AH621] gi|228616218|gb|EEK73302.1| Alanine racemase [Bacillus cereus AH621] Length = 398 Score = 36.7 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 40/345 (11%), Positives = 89/345 (25%), Gaps = 28/345 (8%) Query: 32 YSTTAIEKNYLTFSNAFDGMDTMVCYALKANS----NQAVIKTLAHLG-SGLDIVSEGEL 86 A+++N+ + A T + +KAN+ + K + G S L + E Sbjct: 13 VDLNALQRNFQQYKQAIP-FGTAIMTVVKANAYGHGAVPIAKAVTEAGTSHLAVAFVDEG 71 Query: 87 RRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPI 146 A + ++F + V + +L + + A + K A I Sbjct: 72 IELREAGITVPILIFGYTPYEAIVDAITYD---LSMTVYTIEDLHAIEEVASQMEKNAYI 128 Query: 147 AFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS-GVDMHIGSQID 205 +++ ++ + G+ ++++ +++ + Sbjct: 129 HIKIDTGMS--------------RLGLQLNEVTLFLQTLKCTKYIQVEGMYTHFACADER 174 Query: 206 QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG-LGIAYHSDHRPPSSSDYASLIHQYF 264 ++ + + I I I A Sbjct: 175 DKMYTLMQQEVFQKAVSKAEELQIVIPWIHANNSAATIDMRETKGNMVRLGIALYGLYPS 234 Query: 265 GNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEIN 324 ++ + I + + KV P Y Sbjct: 235 ADVNQEAISLQPILIFKSKVAHIKKVKKGNGVGYGATYTATGEEWIATIPVGYADGVSRQ 294 Query: 325 YIVNPAGDRLHIHADIVGPICETGDFIALNR-KIALPRPGDLLYI 368 + I+G IC D + L+ KI GD + Sbjct: 295 LSNKGFVLIKGMKVPIIGRIC--MDQLMLDVTKIMPIHVGDEVVF 337 >gi|156540962|ref|XP_001601161.1| PREDICTED: similar to nuclear transcription factor, x-box binding 1 (nfx1) [Nasonia vitripennis] Length = 1323 Score = 36.7 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 16/230 (6%), Positives = 37/230 (16%) Query: 116 QSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPI 175 + + + E + + + G A+ + K+ G Sbjct: 816 HTCQANCHKDDCPECELITKVKCRCGYMDKEIPCRELTTKADDARCEKKCTKKRSCGKHK 875 Query: 176 HQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235 P + + G + + Sbjct: 876 CNQKCCIDIEHICPLPCSKTLSCGRHKCEQTCHRGRCQNCWRSSFDELYCECGAAVIYPP 935 Query: 236 VGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKK 295 V G ++H + C + L V Sbjct: 936 VACGTRRPACDKPCSREHPCSHEVLHNCHSDPTCPPCTVLTQKWCYGEHELRKAVPCYVN 995 Query: 296 SADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 + + ++ G IC Sbjct: 996 DVSCGLPCNKPISCGRHKCIQMCHSGPCEKPGQVCTQPCTVPRELCGHIC 1045 >gi|332020655|gb|EGI61061.1| Protein crumbs [Acromyrmex echinatior] Length = 2020 Score = 36.7 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 26/263 (9%), Positives = 45/263 (17%), Gaps = 1/263 (0%) Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + G + + + ++E L + Sbjct: 1702 INECVTLSPCKHEGVCVNLPGSFRCECPDQFTGELCESFRLITCKNEPCKSGATTSCLDE 1761 Query: 143 KAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGS 202 P A + + + + P Sbjct: 1762 PNPKTGNNFTCNCAPGYDGPTCDTPYCFHTKCQNGGRCEFLIPYKAPKCICPVGYTGTYC 1821 Query: 203 QIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG-GLGIAYHSDHRPPSSSDYASLIH 261 +I+ + + +G N D G G S H Sbjct: 1822 EINIDDCAVDSEGNGPCQNDGKCYDGVNKYVCDCQGTGYSGINCSIDVNECQDLEIDCGH 1881 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYH 321 NL + T D Y + Sbjct: 1882 GKCENLPGIYQCICDDGYCGYNCGMANPCQDDFCHNGGTCECGDDGEYICRCTPNYTGRN 1941 Query: 322 EINYIVNPAGDRLHIHADIVGPI 344 N + IVGPI Sbjct: 1942 CTELEYNYLSGQALDIVVIVGPI 1964 >gi|193787892|dbj|BAG53095.1| unnamed protein product [Homo sapiens] Length = 724 Score = 36.7 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 17/166 (10%), Positives = 34/166 (20%) Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 ++ G + +A RD + LR + + ID Sbjct: 389 HSCCKVCKGYDFCSERHNCMENSICRNLNDRAVCSCRDGFRALREDNAYCEDIDECAEGR 448 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + ++ I + + + + Sbjct: 449 HYCRENTMCVNTPGSFMCICKTGYIRIDDYSCTEHDECITNQHNCDENALCFSTVGGHNC 508 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 V + + N A + GP CET Sbjct: 509 VCKPGYTGNGTTCKAFCKDGCRNGGACIAANVCACPQGFTGPSCET 554 >gi|327267933|ref|XP_003218753.1| PREDICTED: integrin beta-like protein 1-like [Anolis carolinensis] Length = 548 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 21/283 (7%), Positives = 42/283 (14%), Gaps = 11/283 (3%) Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKT----LNQRAVSL 140 E + E G G C ++ + + + + + + Sbjct: 144 ECHEWVCETYDGETCAGHGTCDCGKCRCEQGWHGDACQFPKTCNLTRRKSNEMCKNSQDI 203 Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200 N K + + Sbjct: 204 ICSNAGTCHCGRCKCDNLEGNGLIHGKYCECDDRECIDEETGEMCTGHGKCYCGNCYCEA 263 Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260 G D+ E G + + D + Sbjct: 264 GWHGDKCELQCDIAPWEIKKRCTSPDGKICSNRGTCICGECMCHDVDPTGDWGDIHGDTC 323 Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN-------DFMR 313 N + F + + K Sbjct: 324 ECDERNCKALYDRYSDDFCSGHGQCNCGRCDCKSRWTGKKCEHPLSCSMSAEESIRKCQG 383 Query: 314 PTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRK 356 + + I G ICE D + Sbjct: 384 TSQLPCSGRGKCECGQCTCFPLGESKIYGKICECDDRQCEDID 426 >gi|12657593|dbj|BAB21565.1| laminin [Bombyx mori] Length = 1069 Score = 36.7 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 22/276 (7%), Positives = 49/276 (17%), Gaps = 18/276 (6%) Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 D S G L A + G+ + + C + + + Sbjct: 118 CDCSSIGSLDNFCDATSGQCKCRAHTYGRACNLCQPGYFNFPNCQQCDCNGHAFECDDKT 177 Query: 138 VSLGKKAPIAFRVNPDINANTHKKIST--GKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + D T + + + G I Sbjct: 178 GACKEC--------KDYTEGTRCERCVEGYYGDPRLGFDIPCRPCPCPGIKGDTNKNSHA 229 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSD 255 + + + + + +P + Sbjct: 230 DRCILDPETKDVVCDCSEGYAGPLCDVCADNYYGDPLRGTCEKCECNENIDITKPGNCDP 289 Query: 256 YASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT 315 Y Q N + + + + ++ Sbjct: 290 YTGKCLQCLYNTAGEHCDVCEEGYYGNALDKACYKCNCSVLGTNFTIGNCDSITG----- 344 Query: 316 LYDAYHEINYIVNPAGDRLHIHADI-VGPICETGDF 350 N + H I VG C+ D Sbjct: 345 --QCPCHKNVMGINCDQCTENHWRIAVGTGCDPCDC 378 >gi|156543784|ref|XP_001606322.1| PREDICTED: similar to IP15264p [Nasonia vitripennis] Length = 1041 Score = 36.7 bits (83), Expect = 8.1, Method: Composition-based stats. Identities = 18/279 (6%), Positives = 41/279 (14%), Gaps = 11/279 (3%) Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK----- 131 G S G D ++ + E + Sbjct: 513 GKCTCSPGFTGELCQNRCEKGFYGKDCSQVCECHDDNSIDCDPITGRCLCKPEWRGVRCE 572 Query: 132 -TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 + N +ANT + + Sbjct: 573 TKCPAGMYGDDCLNECNCKNNSSCDANTGNCVCARGWQGSDCSQPCSKGWYGVGCKEKCP 632 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + G + R ++ D G + + Sbjct: 633 EQNHGNMTCDHVTGQYVCRPGYLGMTCEHPCPPNRFGQDCVERCDCKNGAECHHVTGMCQ 692 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVT---KVISIKKSADKTFVILDVA 307 + + + + + I Sbjct: 693 CLPGWQGKHCQSRCPEGTYGVNCTQHCKCLNGGKCRANDGLCRCAPGWTGTRCTEICPEG 752 Query: 308 MNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + ++ G GP C+ Sbjct: 753 YYGDHCMEACECKNDFFSCHAAKGCVCKHGYT--GPNCD 789 >gi|307178220|gb|EFN67005.1| Protein crumbs [Camponotus floridanus] Length = 2199 Score = 36.3 bits (82), Expect = 8.3, Method: Composition-based stats. Identities = 31/296 (10%), Positives = 62/296 (20%), Gaps = 22/296 (7%) Query: 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGK 142 E + G + + E+E V + Sbjct: 1881 INECVTLSPCQHDGICVNLPGHFRCECPDQFTGNLCESFRLITCENEPCKNGATCVDIPN 1940 Query: 143 K---APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMH 199 P + +K+ + G ++ + G +++ Sbjct: 1941 TKTGDNFTCNCMPGYDGPICDTPYCIRKKCQNGGRCDFLYLQTPKCTCSLGYSGMYCEIN 2000 Query: 200 IGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASL 259 I +E + + G + Sbjct: 2001 IDDCAPDVEGNVPCKNDGKCYDEVNSFTCDCQDTGYTGP---HCSIDVDECQNPQIDCGH 2057 Query: 260 IHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY-- 317 + I +PG + + +V T + + Y Sbjct: 2058 GKCENLPGTYRCICDPG-YCGYNNCDMVDPCQDDYCQNGGTCKCAPDGRYECHCTSEYTG 2116 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPI--CETGDFIALNRKIALPRPGDLLYIEKT 371 E + N G ++ A IVGPI C + L G L+ Sbjct: 2117 QNCTEKATVANNLGSQVLGIAVIVGPIVGC-----------LLLIAIGSLVAFFMM 2161 >gi|260793418|ref|XP_002591709.1| hypothetical protein BRAFLDRAFT_223397 [Branchiostoma floridae] gi|229276918|gb|EEN47720.1| hypothetical protein BRAFLDRAFT_223397 [Branchiostoma floridae] Length = 564 Score = 36.3 bits (82), Expect = 8.3, Method: Composition-based stats. Identities = 19/268 (7%), Positives = 39/268 (14%), Gaps = 9/268 (3%) Query: 71 LAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESEL 130 + G S G ++ T + + S Sbjct: 218 VNKYGGYRCTCSPG---------WTGQKCQQDINECTRNPCQHGSCMNKDGNYKCTCSPG 268 Query: 131 KTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPG 190 T + + + +N + K + Sbjct: 269 WTGQNCQQDINECIKYPCQHGHCVNQDGGYKCTCPPGWTGQNCQHDVNECTRNPCQHGHC 328 Query: 191 VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 V G S ++ Q + G + Sbjct: 329 VNKHGSYKCTCSPGWTGQNCQYDVNECTRNPCQHGHCVNKHGSYKCTCSPGWTGQNCQYD 388 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 + H + N+ S + D Sbjct: 389 INECTRKPCQHGHCVNIDGGYKCTCSPGWTGQNCQHDINECSKNPCQHGRCMNKDGGYKC 448 Query: 311 FMRPTLYDAYHEINYIVNPAGDRLHIHA 338 P + H Sbjct: 449 ACSPGWTGQNCNKDIDECSRNLCQHGRC 476 >gi|227111908|ref|ZP_03825564.1| hypothetical protein PcarbP_03027 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 380 Score = 36.3 bits (82), Expect = 8.4, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 16/58 (27%), Gaps = 5/58 (8%) Query: 27 TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSEG 84 TPF +N + + + + LK + + L D S Sbjct: 12 TPFLLIDEFRFRRNIDRLYQRTEKLGSQIRPHLKTLRSIEAGRYLLK-----DAASPA 64 >gi|260826578|ref|XP_002608242.1| hypothetical protein BRAFLDRAFT_125057 [Branchiostoma floridae] gi|229293593|gb|EEN64252.1| hypothetical protein BRAFLDRAFT_125057 [Branchiostoma floridae] Length = 5576 Score = 36.3 bits (82), Expect = 8.4, Method: Composition-based stats. Identities = 20/276 (7%), Positives = 52/276 (18%), Gaps = 10/276 (3%) Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G G +VS ++ + + + + D L C + + Sbjct: 5101 GEGYVLVSSEDICGCVTQSCQCRKDTCAQQPECDDNKHLITTETDCCPHYNCTCDTCPPR 5160 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + D T H + P S Sbjct: 5161 PVVDCNYAEGYVLVSSQDDCGCVTESCECREDSCSPEPECPDNKHVVTMETGCCPHYNCS 5220 Query: 195 GVDM------HIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 ++ + + + Sbjct: 5221 CNTCPPSPTPGSDCPYGEMPGYVIHETVDDCGCVNSSCTCDRSRCPAPPTCDDNKNLVAL 5280 Query: 249 RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTK----VISIKKSADKTFVIL 304 P +Y + + I E ++ D V + + + Sbjct: 5281 YTPCCQNYTCECKECPVDDTSCGIGETQTTVIDDCCRHTNCTPEPVCVYQNTTHQPGTSW 5340 Query: 305 DVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADI 340 A ++ +R + + ++ Sbjct: 5341 TDANDNCIRCQCLEEIDPATGFHRVSCSDESSQCEV 5376 >gi|227548088|ref|ZP_03978137.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079814|gb|EEI17777.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length = 229 Score = 36.3 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 58/188 (30%), Gaps = 3/188 (1%) Query: 189 PGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDH 248 + + + ++ + + + + Sbjct: 11 HTPEFIDIGGGVPMSYLDDAEQWADYQAAIAAQRAGYAAPFTWRSDPLATTYPYYQRPTR 70 Query: 249 RPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM 308 P + + + ++ LEPGR L+ G+++ +V +K +D ++ + M Sbjct: 71 GPWLDEVLSGGVAEALTARGLRLHLEPGRSLLDGCGVILAQVAFVKTRSDG-LPLVGLHM 129 Query: 309 NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNR--KIALPRPGDLL 366 N T D Y +V I A +VG C + I R GD++ Sbjct: 130 NRTQCRTTSDDYLVDPILVKRTPASEEIEAFLVGAYCIEDEVILRRRIRFPQGVSAGDII 189 Query: 367 YIEKTGAY 374 I T Y Sbjct: 190 AIPNTAGY 197 >gi|196007574|ref|XP_002113653.1| hypothetical protein TRIADDRAFT_57301 [Trichoplax adhaerens] gi|190584057|gb|EDV24127.1| hypothetical protein TRIADDRAFT_57301 [Trichoplax adhaerens] Length = 1710 Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 24/260 (9%), Positives = 52/260 (20%), Gaps = 10/260 (3%) Query: 92 APVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVN 151 P+ ID+ IY ++ + + L + Sbjct: 154 CQCPSNHTGSYCETFDIDDCKSNPCKHIYAKCIDKINNYQCLCPSDWTGKHCDQDLNSCR 213 Query: 152 PDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFH 211 N + G ++ + + + + + + Sbjct: 214 SSPCKNGGSCTNVGIEQYQCTCSANWTGENCEKDMNSCRLSPCFNEGSCQNDGPDLYKCQ 273 Query: 212 KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKI 271 Q + + + G + P S + Sbjct: 274 CLQGYEGQRCQNDINECVSNPCGNNGTCIDRINDFHCICPVSWTGKTCSDDMNPCRSFPC 333 Query: 272 ILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAG 331 A + T +N+ +R IN + + Sbjct: 334 ENN------AKCTNTQVNTYKCQCPKGLTGSRCRGDINECLRHPCMHNGTCINRFGSYSC 387 Query: 332 DRLHIHADIVGPICETGDFI 351 + I G CE D I Sbjct: 388 NC---PVGITGSHCEE-DII 403 >gi|126540836|emb|CAM46910.1| novel protein similar to vertebrate laminin EGF-like (Domains III and V) family [Danio rerio] gi|126541087|emb|CAM46853.1| novel protein similar to vertebrate laminin EGF-like (Domains III and V) family [Danio rerio] Length = 1084 Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 19/274 (6%), Positives = 40/274 (14%), Gaps = 17/274 (6%) Query: 77 GLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQR 136 GLD S E + + + Sbjct: 125 GLDCSSGCESGY----------WGPHCSNRCQCKNGALCNPITGACVCTDGYQGWRCEDL 174 Query: 137 AVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGV 196 + A H + + PI + Sbjct: 175 CEPGYYGKGCQLQCQCLNGATCHHETGECICAPGYMGPICGERCPSGSHGPQCEQRCPCQ 234 Query: 197 DMHIGSQID--QIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + I + + + + G + + + Sbjct: 235 NGGTCHHITGECSCPAGWTGSVCAQPCPFGKYGINCSKECSCRNGGLCDHITGQCQCMAG 294 Query: 255 DYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRP 314 + + + K D + Sbjct: 295 YSGHRCQEECPVGTYGPQCTLHCDCQNGAKCYHINGACLCDTGFKGHHCQDRFCPPGLYG 354 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETG 348 + D Y N + L C G Sbjct: 355 LICDKYCPCNSTNTISCHPLTGECS-----CTAG 383 >gi|322801882|gb|EFZ22454.1| hypothetical protein SINV_16468 [Solenopsis invicta] Length = 1180 Score = 36.3 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 17/251 (6%), Positives = 42/251 (16%), Gaps = 8/251 (3%) Query: 100 VFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTH 159 + + +G ++ + + + + + + + Sbjct: 640 HTCHACSSNSRCIWSWSNGPDRCKPHVLNDTIQAQRLTMDTCRSPCVEYTSCRNCTESDC 699 Query: 160 KKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRD 219 K T + + + A Sbjct: 700 IWCQNQAKCVDKNAYPASFPYGQCREWTTIDSRCRATETG---REWCSFYSSCATCRSDP 756 Query: 220 LTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFL 279 + + GG S + L Sbjct: 757 GCGWCDDGSGTGKGSCMPGGARGPSSRSSNMCSLELWYFTRCPTCQCNGHSKCLPNSSVC 816 Query: 280 VADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD 339 + G L K + + ++ + G Sbjct: 817 IQPCGNLTYGPHCDKCIPG-----YYGSPLNGATCQPCSCNNQGTQCTSETGKCFCTTKG 871 Query: 340 IVGPICETGDF 350 I+G CE D Sbjct: 872 IIGDHCERCDV 882 >gi|301605595|ref|XP_002932430.1| PREDICTED: fibrillin-2-like [Xenopus (Silurana) tropicalis] Length = 2509 Score = 36.3 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 19/240 (7%), Positives = 51/240 (21%), Gaps = 2/240 (0%) Query: 75 GSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLN 134 G G++ E + + + + + G C +V+ S Sbjct: 826 GDGVECWDINECQDNNTICGNFSDCINTQGSYSCTCKEGFRGDGFNCKDVDECSASGVCG 885 Query: 135 QRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKIS 194 + + + N + H + + Sbjct: 886 ENSRCENSFGSFSCWCNSGFTMTNGSCADINECSPPHPCNEHANCNNTKGSFLCKCKSGF 945 Query: 195 GVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSS 254 + +++ L ++ S G + PS Sbjct: 946 SGNGTTCEDVNECGFEPPVCPLNSQCINEVGSFYCECWEGYEKNGSLCLDIDECLHPSMC 1005 Query: 255 DYASLIHQYFGNLQCKII--LEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 + S+ G+ C + D+ + I+ + + + Sbjct: 1006 HHHSVCINSPGSYDCICVEGFTGNGSFCEDINECEQENITHRCHNGSQCINTMGSFICQC 1065 >gi|73996720|ref|XP_864061.1| PREDICTED: similar to Protein kinase C-binding protein NELL2 precursor (NEL-like protein 2) (Nel-related protein 2) isoform 3 [Canis familiaris] Length = 608 Score = 36.3 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 17/166 (10%), Positives = 34/166 (20%) Query: 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLG 241 ++ G + +A RD + LR + + ID Sbjct: 389 HSCCKVCKGYDFCSERHNCMENSVCRNLNDRAVCSCRDGFRALREDNAYCEDIDECAEGR 448 Query: 242 IAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301 + ++ I + + + + Sbjct: 449 HYCRENTMCVNTPGSFMCICKTGYIRIDDYSCTEHDECITNQHNCDENALCFNTVGGHNC 508 Query: 302 VILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 V + + N A + GP CET Sbjct: 509 VCKPGYTGNGTTCKAFCKDGCRNGGACIAANVCACPQGFTGPSCET 554 >gi|260814799|ref|XP_002602101.1| hypothetical protein BRAFLDRAFT_195524 [Branchiostoma floridae] gi|229287407|gb|EEN58113.1| hypothetical protein BRAFLDRAFT_195524 [Branchiostoma floridae] Length = 341 Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 21/283 (7%), Positives = 47/283 (16%), Gaps = 12/283 (4%) Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVE----SESELK 131 +G + S + + C V + E Sbjct: 59 AGCECPSGWKGEHCELRCPDGTYGKGCVHKCDCENPATCHHVTGQCICVGRTGANCEEPC 118 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + V+ D + + L T Sbjct: 119 PWGKYGPGCERSCECRSNVSCDAMTGRWAACDRWAGCECPSGWKGEHCELRCPDGTYGKG 178 Query: 192 KISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR-- 249 + D + + ++ G + + Sbjct: 179 CVHKCDCENPATCHHVTGQCICVGRTGANCEEPCPWGKYGPGCERSCECRNNNGARCHGL 238 Query: 250 ---PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDV 306 + + H + V +T V + Sbjct: 239 NGACKCTPGWQGGEHCEHRCPDGSYGKGCVYKCDCENTATCHHVTGQCICEGRTGVNCEE 298 Query: 307 AMNDFMRPTLYDAYHEINYIVNPAGDRLHIHAD---IVGPICE 346 + E V+ H + + G CE Sbjct: 299 PCPYGKYGPGCERSCECRSNVSCDVMTGRCHCEQAGLAGEFCE 341 >gi|195153014|ref|XP_002017427.1| GL22298 [Drosophila persimilis] gi|194112484|gb|EDW34527.1| GL22298 [Drosophila persimilis] Length = 1070 Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 22/225 (9%), Positives = 44/225 (19%), Gaps = 3/225 (1%) Query: 130 LKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLP 189 ++ A IA R D +++ ++ KF Sbjct: 191 PNYCEEKQFQCASGACIAIRFVCDGDSDCPDHSDERLEQCKFRESTCNADQFRCGNGNCI 250 Query: 190 GVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR 249 K + S + G SD + Sbjct: 251 PQKWVCDHEADCTDGSDELSLLCISMCQPYEVMCKNMEQCIPRGWLCDGDFDCRDMSDEQ 310 Query: 250 PPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMN 309 + + Q I L D + +D+ + Sbjct: 311 DCTRKTCSPEQFQCKSGEGVCIPLSWMCDQNKDCDDAAMSQCNATCRSDEFTCASGDCIQ 370 Query: 310 DFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALN 354 + + + +N C+ GD I+ Sbjct: 371 SRWKCDGDHDCVDGSDELNCPAKGKCQEEAF---TCDNGDCISKR 412 >gi|71896973|ref|NP_001025911.1| protein NEL precursor [Gallus gallus] gi|2494288|sp|Q90827|NEL_CHICK RecName: Full=Protein NEL; AltName: Full=93 kDa protein; Flags: Precursor gi|1483184|dbj|BAA13167.1| Mr 93 K protein [Gallus gallus] Length = 816 Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 21/230 (9%), Positives = 44/230 (19%), Gaps = 1/230 (0%) Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177 E +T + + + + + Q Sbjct: 326 CCKECQSVCIFEGRTYFEGQRETVYSSSGDCVLFECKDHKMQRIPKDSCATLNCPES-QQ 384 Query: 178 IHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVG 237 I ++ G + +A RD + LR + + +D Sbjct: 385 IPLSHSCCKICKGHDFCTEGHNCMEHSVCRNLDDRAVCSCRDGFRALREDNAYCEDVDEC 444 Query: 238 GGLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSA 297 + ++ I + V + + Sbjct: 445 AEGQHYCRENTMCVNTPGSFMCICKTGYIRIDDYSCTEHDECVTNQHNCDENALCFNTVG 504 Query: 298 DKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICET 347 V + + N A + GP CET Sbjct: 505 GHNCVCKLGYTGNGTVCKAFCKDGCRNGGACIASNVCACPQGFTGPSCET 554 >gi|114650539|ref|XP_001149913.1| PREDICTED: integrin, beta-like 1 (with EGF-like repeat domains) isoform 1 [Pan troglodytes] Length = 445 Score = 36.3 bits (82), Expect = 9.4, Method: Composition-based stats. Identities = 21/275 (7%), Positives = 31/275 (11%), Gaps = 8/275 (2%) Query: 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLG 141 S E R AP D E G Sbjct: 43 SRAESERRCRAPGQPPGAALCHGRGRCDCGVCICHVTEPGMFFGPLCECHEWV-CETYDG 101 Query: 142 KKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIG 201 N+ K + G Sbjct: 102 SICAGTCHCGRCKCDNSDGSGLVYGKFCECDDRECIDDETEEICGGHGKCYCGNCYCKAG 161 Query: 202 SQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIH 261 D+ E G + D + Sbjct: 162 WHGDKCEFQCDITPWESKRRCTSPDGKICSNRGTCVCGECTCHDVDPTGDWGDIHGDTCE 221 Query: 262 QYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAM-------NDFMRP 314 + + F + K Sbjct: 222 CDERDCRAVYDRYSDDFCSGHGQCNCGRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQGS 281 Query: 315 TLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + + G CE D Sbjct: 282 SDLPCSGRGKCECGKCTCYPPGDRRVYGKTCECDD 316 >gi|291229616|ref|XP_002734770.1| PREDICTED: fibrillin 1-like [Saccoglossus kowalevskii] Length = 2737 Score = 36.3 bits (82), Expect = 9.4, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 62/291 (21%), Gaps = 8/291 (2%) Query: 61 ANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIY 120 N++ ++ + G + V G + + + +G Y Sbjct: 1515 CNAHAHCVRNI---LGGYECVCNGGFTGDGTTCTDIDDCASDTTNGCHADAICSNVNGGY 1571 Query: 121 CFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGI--PIHQI 178 + E T N + D N + T KFG ++ Sbjct: 1572 QCECK---EGFTGNGWHCEDLNECADTSLGGCDANEICVNEYGTYSCTCKFGYEADLNTG 1628 Query: 179 HSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGG 238 + + PG + + K +T H Sbjct: 1629 ACVDIDECSNPGNNVCDSLADCYNTPGSYYCQCKDGTDGNGITCTAIDECKLGTHDCDTN 1688 Query: 239 GLGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSAD 298 + + Y S +C + A Sbjct: 1689 SMCVDLDFGFSCECLPGYISGGDTCNDFDECSDAAFNDCHVNAACANEDGSYTCTCLPGY 1748 Query: 299 KTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 + A + +AY E V +VG CE D Sbjct: 1749 DGNGFICHAPDVCENVDCGEAYCEPVDGVATCVCAKGYDYILVGQTCEAFD 1799 >gi|326672866|ref|XP_002664168.2| PREDICTED: fibrillin-2 [Danio rerio] Length = 2493 Score = 36.3 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 23/260 (8%), Positives = 48/260 (18%), Gaps = 4/260 (1%) Query: 75 GSGLDIVSEGELRRALAAPVPA---ERIVFSGVGKTIDEIDLALQSGIYCFNVESESELK 131 GSG D E P + ++ +G C +++ Sbjct: 737 GSGFDCQDVDECNANSTLPHNCSLLSTCHNTEGSYICKCMEGYWGNGFTCSDLDECFPPS 796 Query: 132 TLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGV 191 + + ++ ++ + S Sbjct: 797 ICGNNMTCQNFPGTFTCTCTLGLVYDLGTCVTEKDCKNATNACNIYAECKNVHGSNYCSC 856 Query: 192 KISGVDMHIGSQIDQIESFHKAF-KLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRP 250 + S A L + + +Q G + Sbjct: 857 MKGFHGNGRDCKDLDECSQIGACPNLSNCFNTEGSFHCDCLQGYQYNGTHCDDINECSVG 916 Query: 251 PSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMND 310 S S + G C + + + + + V Sbjct: 917 NFSCPVNSTCYNEVGGYNCSCNNGFIYSYNSVCLDVDECATGKAQCPNASNCHNTVGSYY 976 Query: 311 FMRPTLYDAYHEINYIVNPA 330 Y I VN Sbjct: 977 CECWDGYIGNQTICEDVNEC 996 >gi|195053748|ref|XP_001993788.1| GH21670 [Drosophila grimshawi] gi|193895658|gb|EDV94524.1| GH21670 [Drosophila grimshawi] Length = 1384 Score = 36.3 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 26/272 (9%), Positives = 47/272 (17%), Gaps = 16/272 (5%) Query: 80 IVSEGELRRALAAPV--PAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 + S E + + A + P + + Sbjct: 833 VQSICEQQHSCQACMSNPHCKWDVEPNRCRSHISASGAPFNRTSHDDSLCRPNCASQTNC 892 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVD 197 + + I + + +G + + P IS Sbjct: 893 HNCTEDECIWCQNEQR-----CVDRNAYTASFPYGQCREWTTFISKC-RSAPANSISAGG 946 Query: 198 MHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYA 257 S L + + V GG Y + Sbjct: 947 TTALSSAQCGYYNSCQQCLDDPACGWCDNGSNTGLGKCVVGGALSPYDQSECALKHWFFT 1006 Query: 258 SLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLY 317 S + ++ I + + Y Sbjct: 1007 SCPRCNCNGHSYCNDQQHCEQPCNNLTIGAHCEKCRTGYWGNAINGGECQRCECNNQGDY 1066 Query: 318 DAYHEINYIVNPAGDRLHIHADIVGPICETGD 349 N G IVG CE D Sbjct: 1067 CHPDTGKCYCNTKG--------IVGDHCEKCD 1090 >gi|190610000|tpe|CAL69036.1| TPA: SCO-spondin protein [Ciona savignyi] Length = 3867 Score = 36.3 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 19/269 (7%), Positives = 48/269 (17%), Gaps = 3/269 (1%) Query: 76 SGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQ 135 G + S E + + + + E Sbjct: 3546 DGFYVSSMNESDDIESRACFGKNCSIVTSSWGVWGAWSSCNVHCGAGMQMKTRECYATGN 3605 Query: 136 RAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG 195 + + + + I A Sbjct: 3606 TTHLQERTNCEGEDCRSNCSCMIGQIICESASCQPPQALCRWSDWTAWTACNSSCQVCQC 3665 Query: 196 VDMHIGSQIDQIESFHKAFKLLRDLT---QQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 ++ + + K + QLR + + Sbjct: 3666 INGDTVCRDVCWSPWSKWSQCSATCGTNLHQLRMKTCISVDECGPNVIITERRMCYDVID 3725 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 + + + + R ++ + + K + + + Sbjct: 3726 MPCLPEVTTEAPPPSCNDTVCKEVRCRSGEMAVQMDGECCAKCYPYIEPKLDGCQLKKEL 3785 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIV 341 R D Y VN + H +V Sbjct: 3786 RNFSLDGCRSHEYDVNYCDGKCHSSVHVV 3814 >gi|194332619|ref|NP_001123798.1| hypothetical protein LOC100170549 [Xenopus (Silurana) tropicalis] gi|189441913|gb|AAI67592.1| LOC100170549 protein [Xenopus (Silurana) tropicalis] Length = 1853 Score = 36.3 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 18/274 (6%), Positives = 45/274 (16%), Gaps = 19/274 (6%) Query: 74 LGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTL 133 G G S+ + + + Sbjct: 877 YGFGPYGCSK------CDCHPQGSTSRLCNPFTGQCPCQSNVAGRQCDQCLPGQWGYPHC 930 Query: 134 NQRAVSLGKKAPIAF-RVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK 192 + + +T + + +G PI Sbjct: 931 RPCVCNGHSDECDSKTGACIRCRDSTTGRHCEKCLDGYYGDPILGSGQQCRPCPCPGYPG 990 Query: 193 ISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPS 252 T+ R + + + GG ++ Sbjct: 991 SRNYHGSSCYADKDSHQIVCLCAPGYTGTRCDRCSPGYFGNPEQEGGECRPCQCNNNIDP 1050 Query: 253 SSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFM 312 + + K + + + T + Sbjct: 1051 TDP---ESCDSHSGMCMKCLYNTDGAHCEECKAGFYGSAMQRNCRRCTCNEQGTLQSHCT 1107 Query: 313 RPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 R Y + A+++G C+ Sbjct: 1108 RDVCYCDRVTGHCPCR---------ANVLGKSCD 1132 >gi|126320688|ref|XP_001370414.1| PREDICTED: similar to MEGF10 protein (KIAA1780) [Monodelphis domestica] Length = 1112 Score = 36.3 bits (82), Expect = 9.9, Method: Composition-based stats. Identities = 21/275 (7%), Positives = 43/275 (15%), Gaps = 8/275 (2%) Query: 78 LDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRA 137 + A + + + + Sbjct: 493 CTCAPGWRGEKCEFACQDG-TYGLNCMERCDCSHADGCHPTTGYCRCLPGWSGIHCDSVC 551 Query: 138 VSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISG-- 195 V + A+ + F Q + K Sbjct: 552 VEGHWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRICSPGFYGHRCSQKCPQCV 611 Query: 196 ----VDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPP 251 HI D + F A + + N I G S P Sbjct: 612 HSSGPCHHITGLCDCLPGFTGALCNEVCPSGRFGKNCGGICTCTNNGTCNPIDRSCQCYP 671 Query: 252 SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDF 311 + I A + + + + Sbjct: 672 GWIGSDCSQPCPPAHWGPNCIHTCNCHNGAYCSAYDGECKCTPGWTGL-YCTQRCPLGFY 730 Query: 312 MRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICE 346 + + + + +G CE Sbjct: 731 GKDCALICQCQNGADCDHISGQCTCRTGFMGKHCE 765 >gi|119598160|gb|EAW77754.1| MEGF11 protein, isoform CRA_a [Homo sapiens] Length = 849 Score = 36.3 bits (82), Expect = 9.9, Method: Composition-based stats. Identities = 28/263 (10%), Positives = 46/263 (17%), Gaps = 10/263 (3%) Query: 85 ELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKA 144 E G + G +C N N + A Sbjct: 31 ECVHGRCVSPDTCHCEPGWGGPDCSSGCDSDHWGPHCSNRCQCQNGALCNPITGACVCAA 90 Query: 145 PIAFRVNPDINA-NTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203 ++ A TH K + + G A G + Sbjct: 91 GFRGWRCEELCAPGTHGKGCQLPCQCRHGASCDPRAGECLCAP--------GYTGVYCEE 142 Query: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263 + S +L + + G A + PP + Sbjct: 143 LCPPGSHGAHCELRCPCQNGGTCHHITGECAC-PPGWTGAVCAQPCPPGTFGQNCSQDCP 201 Query: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323 + + A + S N A Sbjct: 202 CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQRCDCHNGGQCSPTTGACECE 261 Query: 324 NYIVNPAGDRLHIHADIVGPICE 346 P + GP C Sbjct: 262 PGYKGPRCQERLCPEGLHGPGCT 284 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.313 0.121 0.353 Lambda K H 0.267 0.0374 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,300,189,110 Number of Sequences: 14124377 Number of extensions: 220287574 Number of successful extensions: 465339 Number of sequences better than 10.0: 5961 Number of HSP's better than 10.0 without gapping: 4814 Number of HSP's successfully gapped in prelim test: 1147 Number of HSP's that attempted gapping in prelim test: 450476 Number of HSP's gapped (non-prelim): 6783 length of query: 431 length of database: 4,842,793,630 effective HSP length: 142 effective length of query: 289 effective length of database: 2,837,132,096 effective search space: 819931175744 effective search space used: 819931175744 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 82 (36.3 bits)