RPSBLAST alignment of GI: 254780371 and protein with PDBid: 1twi
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A* Length = 434
Score = 279 bits (713), Expect = 1e-75
Identities = 153/430 (35%), Positives = 232/430 (53%), Gaps = 16/430 (3%)
Query: 4 FKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFD------GMDTMVCY 57
+ +G + +LA TP Y S I+ NY + AF G + +V Y
Sbjct: 7 VEIKDGRFFIDGYDAIELAEKFGTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAY 66
Query: 58 ALKANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQS 117
A KAN+N A+ + LA LG G D+VS GEL A + VP+++IVF+G KT +EI + +++
Sbjct: 67 AYKANANLAITRLLAKLGCGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEA 126
Query: 118 GIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQ 177
I FNV+S SEL +N+ A LG+ A +AFR+NP++N TH KISTG K++KFG+ +
Sbjct: 127 NIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVES 186
Query: 178 IHSLYAYAST--LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHID 235
++ A + V + GV HIGSQ+ I F + + + D +L+ G I+ ++
Sbjct: 187 GIAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVN 246
Query: 236 VGGGLGIAYHSDHRPPSSSDYA-----SLIHQYFGNLQCKIILEPGRFLVADVGILVTKV 290
+GGGLGI Y+ D + P+ D A +++ +ILEPGR LVA G L+ KV
Sbjct: 247 LGGGLGIPYYKDKQIPTQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKV 306
Query: 291 ISIKKSADKTFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDF 350
IK++ +V++D MND MRP +Y+AYH I + I G +CE+ D
Sbjct: 307 HHIKETPVTKWVMIDAGMNDMMRPAMYEAYHHIINCKVKNEKEV---VSIAGGLCESSDV 363
Query: 351 IALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQEL 410
+R++ GD+L I GAYG + YN+R ++ + +IR R T+ +L
Sbjct: 364 FGRDRELDKVEVGDVLAIFDVGAYGISMANNYNARGRPRMVLTSKKGVFLIRERETYADL 423
Query: 411 IELDSIPAWL 420
I D +P L
Sbjct: 424 IAKDIVPPHL 433