RPSBLAST alignment of GI: 254780371 and protein with PDBid: 2oo0

 Score =  270 bits (690), Expect = 5e-73
 Identities = 91/433 (21%), Positives = 166/433 (38%), Gaps = 35/433 (8%)

Query: 4   FKYFEGSLHAENVSLEKLAHVV----QTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59
             + +    A+++  +K+  V     +  FY      I K +L +  A   +     YA+
Sbjct: 21  CHFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPRVT--PFYAV 78

Query: 60  KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119
           K N ++A++KTLA  G+G D  S+ E++   +  VP ERI+++   K + +I  A  +G+
Sbjct: 79  KCNDSKAIVKTLAATGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGV 138

Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179
                +SE EL  + +             +    +   T    +  +   KFG  +    
Sbjct: 139 QMMTFDSEVELMKVAR----------AHPKAKLVLRIATDDSKAVCRLSVKFGATLRTSR 188

Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239
            L    +    + + GV  H+GS     E+F +A    R +       G ++  +D+GGG
Sbjct: 189 -LLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGG 247

Query: 240 LGIAYHSDHRPP--SSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIK--- 294
              +     +    +     +L   +  +   +II EPGR+ VA    L   +I+ K   
Sbjct: 248 FPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVL 307

Query: 295 -----------KSADKTFVILDVAMNDFMRPTLYDAYHEINYIVN-PAGDRLHIHADIVG 342
                       S       ++  +       LYD  H    +   P  D  +  + I G
Sbjct: 308 KEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPDEKYYSSSIWG 367

Query: 343 PICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV-NGSQFHII 401
           P C+  D I     +     GD +  E  GAY    + T+N         V +G  + ++
Sbjct: 368 PTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLM 427

Query: 402 RPRMTFQELIELD 414
           +         E++
Sbjct: 428 QQFQNPDFPPEVE 440