RPSBLAST alignment of GI: 254780371 and protein with PDBid: 3gwq

>3gwq_A D-serine deaminase; YP_556991.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.00A {Burkholderia xenovorans LB400} Length = 426

 Score = 41.9 bits (97), Expect = 3e-04
 Identities = 45/348 (12%), Positives = 90/348 (25%), Gaps = 26/348 (7%)

Query: 25  VQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGS-GLDIVSE 83
           V  P        +E N              +    K      + +     G+ G+ + + 
Sbjct: 44  VSLPAAVLYADRVEHNLKWMQAFVAEYGVKLAPHGKTTMAPQLFRRQLETGAWGITLATA 103

Query: 84  GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFN---VESESELKTLNQRAVSL 140
            ++R A    V    +    VG+    +   L S         V+S   ++ L +   S+
Sbjct: 104 HQVRAAYHGGVSRVLMANQLVGRRNMMMVAELLSDPEFEFFCLVDSVEGVEQLGEFFKSV 163

Query: 141 GKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHI 200
            K+  +   +         +  +              + ++  Y  TL    +   +  +
Sbjct: 164 NKQLQVLLELGVPGGRTGVRDAA---------QRNAVLEAITRYPDTLKLAGVELYEGVL 214

Query: 201 GSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLI 260
             + +  E    A  + R+L +Q R           G G             +S+   + 
Sbjct: 215 KEEHEVREFLQSAVAVTRELVEQERFARAPAVL--SGAGSAWYDVVAEEFVKASETGKVE 272

Query: 261 HQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAY 320
                       L PG +L  DVGI       I         + +  +          + 
Sbjct: 273 VV----------LRPGCYLTHDVGIYRKAQTDIFARNPVAKKMGEGLLPALQLWAYVQSI 322

Query: 321 HEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYI 368
            E +  +   G R     D   P               +         
Sbjct: 323 PEPDRAIIGLGKR-DSAFDAGMPEPARHYRPGNEAPRDIAASEGWEIF 369