BLAST/PSIBLAST alignment of GI: 254780372 and GI: 86356318 at iteration 1
>gi|86356318|ref|YP_468210.1| flagellar biosynthesis protein FliP [Rhizobium etli CFN 42] Length = 245
>gi|86280420|gb|ABC89483.1| flagellar biosynthesis transmembrane protein [Rhizobium etli CFN 42] Length = 245
 Score =  326 bits (836), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 154/246 (62%), Positives = 200/246 (81%), Gaps = 3/246 (1%)

Query: 1   MIRY-CFFALFLVTPELVFAKSSLHDVMNIPADLSISTWIVRTFGIFTILSIAPILLIMV 59
           MIR+  F A  +  PEL  A+    D++N+P D S++ WI+RTFG+ T+LS+AP +LIMV
Sbjct: 1   MIRFIVFLAAMMAVPELAVAQQLPTDLLNVPVDGSVAAWIIRTFGLLTVLSVAPGILIMV 60

Query: 60  TCFPRFIIVFSILRTGMGMGSVPPNLVIISLALFMTFYVMSPTLDRSIEMGIQPLMNNQI 119
           T FPRF+I FSILR+GMG+ S P N++++SL+LFMTFYVMSPT D++ + G+QPL+ NQI
Sbjct: 61  TSFPRFVIAFSILRSGMGLSSTPSNMILLSLSLFMTFYVMSPTFDQAWQNGVQPLLANQI 120

Query: 120 TETTAIQRVAEPFWVFMRNNTREKDLSLFMDMAHSSHRNTDITKNDHIEYRILIPSFMIS 179
            ET A+QR+AEPF  FM  NTR+KDL+LF+D+A    R  +I   D I+YR+LIP+FMIS
Sbjct: 121 NETEAVQRIAEPFRTFMAANTRDKDLALFVDLAR--ERGQNIQTTDPIDYRVLIPAFMIS 178

Query: 180 ELRRSFEIGFLIILPFLIIDMIVATIVMAMGMMMLPPTSISLPFKVIFFVLIDGWSLLVE 239
           E+RR FEIGFL++LPFL+ID+IVATI MAMGMMMLPPTSISLPFK++FFVLIDGW+LLV 
Sbjct: 179 EIRRGFEIGFLVVLPFLVIDLIVATITMAMGMMMLPPTSISLPFKILFFVLIDGWNLLVG 238

Query: 240 NLVKSF 245
           +LV+SF
Sbjct: 239 SLVRSF 244