RPSBLAST alignment for GI: 254780372 and conserved domain: PRK12797

>gnl|CDD|183754 PRK12797, PRK12797, type III secretion system protein YscR; Provisional. Length = 213

 Score =  176 bits (450), Expect = 4e-45
 Identities = 79/199 (39%), Positives = 125/199 (62%), Gaps = 8/199 (4%)

Query: 49  LSIAPILLIMVTCFPRFIIVFSILRTGMGMGSVPPNLVIISLALFMTFYVMSPTLDRSIE 108
           LS+ P++ +M T F +  +V S+LR  +G+  VPPN+ +  LAL +T +VM+P      +
Sbjct: 17  LSLLPLIAVMGTSFLKISVVLSLLRNALGVQQVPPNMALYGLALILTLFVMAPVGLAIQD 76

Query: 109 MGIQPLMNNQITE--TTAIQRVAEPFWVFMRNNTREKDLSLFMDMAH---SSHRNTDITK 163
              QP ++ Q  +     +     P   F++ +T E++ + F+  A           + K
Sbjct: 77  RLQQPPLSLQDPDSVLQLLDAALAPLRDFLKKHTDERERTFFVRSAQRIWPEEAADSLKK 136

Query: 164 NDHIEYRILIPSFMISELRRSFEIGFLIILPFLIIDMIVATIVMAMGMMMLPPTSISLPF 223
           +D +   ILIP+F +SEL R+FEIGFL+ LPF++ID+I++ I++AMGMMM+ PT+ISLPF
Sbjct: 137 DDLL---ILIPAFTLSELTRAFEIGFLLYLPFIVIDLIISNILLAMGMMMVSPTTISLPF 193

Query: 224 KVIFFVLIDGWSLLVENLV 242
           K++ FVL+DGWS L+  LV
Sbjct: 194 KLLLFVLVDGWSRLLHGLV 212