HHsearch alignment for GI: 254780373 and conserved domain: PRK05696

>PRK05696 fliL flagellar basal body-associated protein FliL; Reviewed.
Probab=100.00  E-value=1e-37  Score=224.85  Aligned_cols=155  Identities=10%  Similarity=0.144  Sum_probs=108.8

Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
Q ss_conf             85435532346763205999999999999999999999970678765201245565310112233333344443333530
Q gi|254780373|r    2 SYDDTTSQYIRGNQHKLFVTWFVVYTFIGIFCGWLGGIVMLFLFAGQKEEKYQKFILNNFYDNSVRSVHTGDTISLKKLQ   81 (172)
Q Consensus         2 a~~~~~~~~~kG~~~kl~Iii~~vv~ll~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (172)
T Consensus         2 a~e~~e~e~~~k~KkKLiiii~~~vlll~ggggg-~~-~~lg~~~~~~~~~~~~~~~-------------~~~~~~~~~~   66 (168)
T PRK05696          2 ASEELEKDEAPKSKKKLIIIIVVGVLLALGGGGA-AW-FFMGSSDPAEAAAAEAAAA-------------AAAAPVPPAL   66 (168)
T ss_pred             CCHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHH-HH-HHHCCCCCCCCCCCCCCCC-------------CCCCCCCCCC
T ss_conf             0023113467888633204799999999999999-99-9955887544444444556-------------6778877752


Q ss_pred             EECC-CCEEEEECCCCC-EEEEEEEEEEECCCH----HHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf             2103-320242058983-389999998504402----4542189999999998418988950889999999999999854
Q gi|254780373|r   82 IFSL-QPIITNFDSSPK-DWLRLDIALICKDIP----DKVFLETLHQDIMAYIRTVSIKQITGAQGFRYFKEDIEERVKL  155 (172)
Q Consensus        82 ~~~l-~~fvvNL~~~~~-r~lk~~i~l~~~~~~----~e~~~p~Ird~il~~L~~~~~~dl~~~~Gk~~Lk~el~~~in~  155 (172)
T Consensus        67 y~~l~~~F~VNL~~~~~~ryLqv~i~L~~~d~~~~~~i~~~~P~IR~~ll~lls~~~~~~l~t~eGk~~Lr~e~~~~in~  146 (168)
T PRK05696         67 YVPMPRPFVFNVPGNGRDRLVQIKVQLMVRGSADEELAKKHIPLIENALLMTFSGADVDQLSTPAGKEELRQKALASVQE  146 (168)
T ss_pred             CCCCCCCEEEECCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf             13578663886168997469999999998887689999875588999999999628998960987899999999999999


Q ss_pred             -H----CCCCEEEEEEEEEEC
Q ss_conf             -2----356312576432201
Q gi|254780373|r  156 -R----SQGFVSSVIFRTFII  171 (172)
Q Consensus       156 -~----~~g~V~~V~Ft~fVv  171 (172)
T Consensus       147 ~l~~~~g~~~V~~VlFT~FVv  167 (168)
T PRK05696        147 TLQKVTGKPVVEKVLFTGFVM  167 (168)
T ss_pred             HHHHCCCCCCEEEEEECCCEE
T ss_conf             976313887512785302364