BLAST/PSIBLAST alignment of GI: 254780373 and GI: 209547933 at iteration 1
>gi|209547933|ref|YP_002279850.1| flagellar basal body-associated protein FliL [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 168
>gi|209533689|gb|ACI53624.1| flagellar basal body-associated protein FliL [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 168
 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 92/168 (54%), Gaps = 5/168 (2%)

Query: 4   DDTTSQYIRGNQHKLFVTWFVVYTFIGIFCGWLGGIVMLFLFAGQKEEKYQKFILNNFYD 63
           D +  Q  + +   + +    V T +G   GW  G ++     G KE + Q         
Sbjct: 5   DASAGQPKKKSGTLMMIIGIAVLTLLGAGGGWAVGTIVAPNIKGAKEAE-QAKDAEAKKK 63

Query: 64  NSVRSVHTGDTISLKKLQIFSLQPIITNFDSSPKDWLRLDIALICKDIPDKVFLETLHQD 123
                 H    IS +   +  L+PI +N     ++W+RL++AL+    PD    E +HQD
Sbjct: 64  AEEGLAH----ISTEANNVVQLEPITSNLAYPSENWVRLEVALLFNGPPDVKVSEDIHQD 119

Query: 124 IMAYIRTVSIKQITGAQGFRYFKEDIEERVKLRSQGFVSSVIFRTFII 171
           I+AYIRTVS++QI G +GF+Y K+DI+ERV LRSQG VS V+FRTF+I
Sbjct: 120 ILAYIRTVSLQQIEGPRGFQYLKDDIQERVDLRSQGRVSKVMFRTFVI 167