HHsearch alignment for GI: 254780374 and conserved domain: PRK12407
>PRK12407 flgH flagellar basal body L-ring protein; Reviewed.
Probab=100.00 E-value=0 Score=451.19 Aligned_cols=218 Identities=26% Similarity=0.352 Sum_probs=180.4
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC
Q ss_conf 117999999999985433672002568753667777664444564455544444445576121577-5521123223676
Q gi|254780374|r 2 YRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS-HAALFKDSRALNV 80 (238)
Q Consensus 2 ~r~~l~~l~~~~lL~GCas~~~~~~~~p~~tp~~~~~~~~~~~p~~~~~~~~~~~~~~~gSL~~~~-~~~lf~D~RA~~V 80 (238)
T Consensus 1 kr~-l~l~~~~l~LsGC~~~~~~~~~-----------~~~~~app~--~~~~p~~~~~~GSi~~~~~~~~lf~D~RA~~V 66 (220)
T PRK12407 1 KRF-LILTPMVLALCGCESPALLVQK-----------DDAEFAPPA--NLIQPATVTEGGGLFQPAYSWSLLQDRRAYRI 66 (220)
T ss_pred CCC-HHHHHHHHHHHCCCCCCCCCCC-----------CCCCCCCCC--CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
T ss_conf 915-7999999997365888877888-----------987878977--76778888999730007987755365544568
Q ss_pred CCEEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECEEEEEEEEEEEEEE
Q ss_conf 87699999724101000012223456544555433345544556665546555554321100000001489999999999
Q gi|254780374|r 81 GDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTA 160 (238)
Q Consensus 81 GDIiTV~i~E~~~a~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~G~~~~~~~l~~~isa~V~~ 160 (238)
T Consensus 67 GDIlTV~i~E~t~As~s~~t~~~r~~~~~~~~~~~~g~~~~---~--~~~~~~~~~~f~G~G~~~qs~~ltg~itvtV~~ 141 (220)
T PRK12407 67 GDILTVILDESTQSSKQAKTNFGKKNDMSLGVPEVLGKKLN---K--FGGSISGKRDFDGSATSAQQNMLRGSITVAVHQ 141 (220)
T ss_pred CCEEEEEEEECCHHHHHCCCCCCCCCCCCCCCCCHHCCCCC---C--CCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEE
T ss_conf 98699999871443320254424456645466202044443---3--555444564346730220132588899999999
Q ss_pred ECCCCCEEEEEEEEEEEECCEEEEEEEEEECHHHCCCCCEEEHHEEEEEEEEEECEEEECCCCCCCHHHHHHHH-HCCC
Q ss_conf 80797289978877984188799999979847767899738242055439998020331233486668999998-5589
Q gi|254780374|r 161 ILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIEN-LSPL 238 (238)
Q Consensus 161 VlpNGnL~I~G~k~i~vn~e~~~i~isGiVRp~DI~~~NtV~S~~iAda~I~y~g~G~~~d~~~~gwl~r~~~~-i~Pl 238 (238)
T Consensus 142 VlpNGNLvI~G~K~v~vN~e~e~irvsGiVRP~DI~~dNtV~S~~iAdArI~Y~G~G~l~d~~~~GWlsrff~~~~~p~ 220 (220)
T PRK12407 142 VLPNGVLVIRGEKWLTLNQGDEYMRVTGLVRADDVARDNSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFPI 220 (220)
T ss_pred ECCCCCEEEEEEEEEEECCCEEEEEEEEEECHHHCCCCCEECCCEEEEEEEEEEEEEEECCCCCCCHHHHHHCCCCCCC
T ss_conf 8789968999979999899879999999988788799985972132448999820151363425388899757675789