HHsearch alignment for GI: 254780374 and conserved domain: PRK12697
>PRK12697 flgH flagellar basal body L-ring protein; Reviewed.
Probab=100.00 E-value=0 Score=446.96 Aligned_cols=211 Identities=27% Similarity=0.354 Sum_probs=176.6
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCEEEE
Q ss_conf 99999985433672002568753667777664444564455544444445576121577--5521123223676876999
Q gi|254780374|r 9 LCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS--HAALFKDSRALNVGDILTV 86 (238)
Q Consensus 9 l~~~~lL~GCas~~~~~~~~p~~tp~~~~~~~~~~~p~~~~~~~~~~~~~~~gSL~~~~--~~~lf~D~RA~~VGDIiTV 86 (238)
T Consensus 15 al~~l~LsGCa~~~~~p~-----------~~~----p~~~~~-~~~~~~~~~GSi~~~~~~~~~LF~D~RA~~VGDIiTV 78 (227)
T PRK12697 15 ALAALALAGCAQIPREPI-----------TQQ----PMTAQP-PMPPSMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTI 78 (227)
T ss_pred HHHHHHHHCCCCCCCCCC-----------CCC----CCCCCC-CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEE
T ss_conf 999999726567899998-----------889----878889-9987779997500587666600146654789996999
Q ss_pred EEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECEEEEEEEEEEEEEEECCCCC
Q ss_conf 99724101000012223456544555433345544556665546555554321100000001489999999999807972
Q gi|254780374|r 87 DIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGN 166 (238)
Q Consensus 87 ~i~E~~~a~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~G~~~~~~~l~~~isa~V~~VlpNGn 166 (238)
T Consensus 79 ~i~E~~~Asks~~t~~~r~~~~~~~~~~~~~l~~~---~~~~~~~~~~s~~f~G~G~~~~sn~ltgtItatV~~VLPNGN 155 (227)
T PRK12697 79 VIAENINATKSSGANTNRQGNTSFDVPTAGFLGGL---FNKANLSATGANKFAATGGASAANTFNGTITVTVTNVLPNGN 155 (227)
T ss_pred EEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCC
T ss_conf 99981311120356535567744367654333665---665543555564245643200111588999999999877993
Q ss_pred EEEEEEEEEEEECCEEEEEEEEEECHHHCCCCCEEEHHEEEEEEEEEECEEEECCCCCCCHHHHHHHHHCCC
Q ss_conf 899788779841887999999798477678997382420554399980203312334866689999985589
Q gi|254780374|r 167 LIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238 (238)
Q Consensus 167 L~I~G~k~i~vn~e~~~i~isGiVRp~DI~~~NtV~S~~iAda~I~y~g~G~~~d~~~~gwl~r~~~~i~Pl 238 (238)
T Consensus 156 LvI~GeK~v~vN~e~e~IrlsGvVRP~DI~~dNtV~S~~IAdArI~Y~G~G~l~d~q~~GWl~r~f~~i~PF 227 (227)
T PRK12697 156 LVVSGEKQMLINQGNEFVRFSGVVNPNTISGQNSVYSTQVADARIEYSAKGYINEAETMGWLQRFFLNIAPW 227 (227)
T ss_pred EEEEEEEEEEECCCEEEEEEEEEECHHHCCCCCEECCCEEEEEEEEECCCEEECCCCCCCHHHHHHHHHCCC
T ss_conf 999999999988987999999898778779998596005354799980202135222559999998864889