HHsearch alignment for GI: 254780374 and conserved domain: PRK12699
>PRK12699 flgH flagellar basal body L-ring protein; Reviewed.
Probab=100.00 E-value=0 Score=442.08 Aligned_cols=216 Identities=23% Similarity=0.341 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------CCCCCCCCCC
Q ss_conf 999999998543367200-2568753667777664444564455544444445576121577--------5521123223
Q gi|254780374|r 7 IVLCYSSLLFGCHSSISE-ITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS--------HAALFKDSRA 77 (238)
Q Consensus 7 ~~l~~~~lL~GCas~~~~-~~~~p~~tp~~~~~~~~~~~p~~~~~~~~~~~~~~~gSL~~~~--------~~~lf~D~RA 77 (238)
T Consensus 22 ~~~~~~~~l~gC~~~~~~p~~~~p~------------~a~--p~~~~~~~p~~~~Gsiy~~~~~~~~~g~~~~LF~D~RA 87 (246)
T PRK12699 22 VLIVMLALVGGCSLPTPAPKVQQPM------------SAR--PPDLPLIPPSQGNGGIYQAAFDYQGRGRYHPLFEDRRA 87 (246)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCC------------CCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999860446899987678875------------468--99755568888888602255444466654567576755
Q ss_pred CCCCCEEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECEEEEEEEEEEE
Q ss_conf 67687699999724101000012223456544555433345544556665546555554321100000001489999999
Q gi|254780374|r 78 LNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI 157 (238)
Q Consensus 78 ~~VGDIiTV~i~E~~~a~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~G~~~~~~~l~~~isa~ 157 (238)
T Consensus 88 ~~VGDIlTV~I~EstsAsk~a~t~~sr~~s~~~~~~~~~G~~~~~~~-~~~~~~~~ss~~f~G~G~~~~sn~ltgtItat 166 (246)
T PRK12699 88 RQIGDTIIVLLNEKTNASKKSGSNAQRNGDISLSVPSFLGLPFKSIF-QDLDLEASSSNKFDGKGESSSNNNFTGTITVT 166 (246)
T ss_pred CCCCCEEEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf 54898599999973543221465536466635467421477643456-67675654454334642000103589999999
Q ss_pred EEEECCCCCEEEEEEEEEEEECCEEEEEEEEEECHHHCCCCCEEEHHEEEEEEEEEECEEEECCCCCCCHHHHHHHHHCC
Q ss_conf 99980797289978877984188799999979847767899738242055439998020331233486668999998558
Q gi|254780374|r 158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP 237 (238)
Q Consensus 158 V~~VlpNGnL~I~G~k~i~vn~e~~~i~isGiVRp~DI~~~NtV~S~~iAda~I~y~g~G~~~d~~~~gwl~r~~~~i~P 237 (238)
T Consensus 167 Vv~VLpNGNLvI~GeK~v~vN~e~e~IrlsGiVRP~DI-~dNtV~St~IAdArI~Y~G~G~i~d~q~~GWl~R~f~~i~P 245 (246)
T PRK12699 167 VVDILPNGNLLVSGEKQIGINQGHEFIRLSGVINPINV-INNTVSSIQVADARIEYRGNGYLDEAQTMGWLSRFFLSISP 245 (246)
T ss_pred EEEECCCCCEEEEEEEEEEECCCEEEEEEEEEECHHHC-CCCEECHHEEEEEEEEECCCEEECCCCCCCHHHHHHHHHCC
T ss_conf 99987899889998799998898799999999783436-78708300125489998231112522255999999876189
Q ss_pred C
Q ss_conf 9
Q gi|254780374|r 238 L 238 (238)
Q Consensus 238 l 238 (238)
T Consensus 246 F 246 (246)
T PRK12699 246 F 246 (246)
T ss_pred C
T ss_conf 9