HHsearch alignment for GI: 254780374 and conserved domain: PRK12699

>PRK12699 flgH flagellar basal body L-ring protein; Reviewed.
Probab=100.00  E-value=0  Score=442.08  Aligned_cols=216  Identities=23%  Similarity=0.341  Sum_probs=180.8

Q ss_pred             HHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------CCCCCCCCCC
Q ss_conf             999999998543367200-2568753667777664444564455544444445576121577--------5521123223
Q gi|254780374|r    7 IVLCYSSLLFGCHSSISE-ITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDS--------HAALFKDSRA   77 (238)
Q Consensus         7 ~~l~~~~lL~GCas~~~~-~~~~p~~tp~~~~~~~~~~~p~~~~~~~~~~~~~~~gSL~~~~--------~~~lf~D~RA   77 (238)
T Consensus        22 ~~~~~~~~l~gC~~~~~~p~~~~p~------------~a~--p~~~~~~~p~~~~Gsiy~~~~~~~~~g~~~~LF~D~RA   87 (246)
T PRK12699         22 VLIVMLALVGGCSLPTPAPKVQQPM------------SAR--PPDLPLIPPSQGNGGIYQAAFDYQGRGRYHPLFEDRRA   87 (246)
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCC------------CCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             9999999860446899987678875------------468--99755568888888602255444466654567576755


Q ss_pred             CCCCCEEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECEEEEEEEEEEE
Q ss_conf             67687699999724101000012223456544555433345544556665546555554321100000001489999999
Q gi|254780374|r   78 LNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAI  157 (238)
Q Consensus        78 ~~VGDIiTV~i~E~~~a~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~G~~~~~~~l~~~isa~  157 (238)
T Consensus        88 ~~VGDIlTV~I~EstsAsk~a~t~~sr~~s~~~~~~~~~G~~~~~~~-~~~~~~~~ss~~f~G~G~~~~sn~ltgtItat  166 (246)
T PRK12699         88 RQIGDTIIVLLNEKTNASKKSGSNAQRNGDISLSVPSFLGLPFKSIF-QDLDLEASSSNKFDGKGESSSNNNFTGTITVT  166 (246)
T ss_pred             CCCCCEEEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf             54898599999973543221465536466635467421477643456-67675654454334642000103589999999


Q ss_pred             EEEECCCCCEEEEEEEEEEEECCEEEEEEEEEECHHHCCCCCEEEHHEEEEEEEEEECEEEECCCCCCCHHHHHHHHHCC
Q ss_conf             99980797289978877984188799999979847767899738242055439998020331233486668999998558
Q gi|254780374|r  158 VTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSP  237 (238)
Q Consensus       158 V~~VlpNGnL~I~G~k~i~vn~e~~~i~isGiVRp~DI~~~NtV~S~~iAda~I~y~g~G~~~d~~~~gwl~r~~~~i~P  237 (238)
T Consensus       167 Vv~VLpNGNLvI~GeK~v~vN~e~e~IrlsGiVRP~DI-~dNtV~St~IAdArI~Y~G~G~i~d~q~~GWl~R~f~~i~P  245 (246)
T PRK12699        167 VVDILPNGNLLVSGEKQIGINQGHEFIRLSGVINPINV-INNTVSSIQVADARIEYRGNGYLDEAQTMGWLSRFFLSISP  245 (246)
T ss_pred             EEEECCCCCEEEEEEEEEEECCCEEEEEEEEEECHHHC-CCCEECHHEEEEEEEEECCCEEECCCCCCCHHHHHHHHHCC
T ss_conf             99987899889998799998898799999999783436-78708300125489998231112522255999999876189


Q ss_pred             C
Q ss_conf             9
Q gi|254780374|r  238 L  238 (238)
Q Consensus       238 l  238 (238)
T Consensus       246 F  246 (246)
T PRK12699        246 F  246 (246)
T ss_pred             C
T ss_conf             9