HHsearch alignment for GI: 254780374 and conserved domain: PRK12788
>PRK12788 flgH flagellar basal body L-ring protein; Reviewed.
Probab=100.00 E-value=0 Score=462.81 Aligned_cols=228 Identities=38% Similarity=0.624 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 99999999985433672002568753667777664444564455544444445576121577552112322367687699
Q gi|254780374|r 6 FIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKDSRALNVGDILT 85 (238)
Q Consensus 6 l~~l~~~~lL~GCas~~~~~~~~p~~tp~~~~~~~~~~~p~~~~~~~~~~~~~~~gSL~~~~~~~lf~D~RA~~VGDIiT 85 (238)
T Consensus 4 l~~~~a~l~LsGCa~~~~~~~~~P~~sPv~~~~~~~-~~~--~P~~p~~~~~~~~~Sl~~~~-~~LF~D~RA~~VGDIlT 79 (231)
T PRK12788 4 LVAILACLALAGCANNLADALQAPRMSPIGQGLRAD-ARA--IPVEPRMRTPVSRRSLWDER-TDLYRDPRASRTGDLLT 79 (231)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCC--CCCCCCCCCCCCCCCCHHCC-CCCCCCCCCCCCCCEEE
T ss_conf 999999999764038743367899878888876666-777--78887777777778411145-53336664233798499
Q ss_pred EEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECEEEEEEEEEEEEEEECCCC
Q ss_conf 99972410100001222345654455543334554455666554655555432110000000148999999999980797
Q gi|254780374|r 86 VDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENG 165 (238)
Q Consensus 86 V~i~E~~~a~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~G~~~~~~~l~~~isa~V~~VlpNG 165 (238)
T Consensus 80 V~i~e~~~As~~~~t~~sr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~G~G~~~rs~~lt~tIaa~V~~VLPNG 158 (231)
T PRK12788 80 VTISMNDKATLDNKTDRSRDSQTKFGLDYLAEFLPW-SDKGKLTANVSSQTSTKGTGKIDRTEEVKFSVAAIVVDVLPNG 158 (231)
T ss_pred EEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCC
T ss_conf 999872432220355414345635475101013665-6666533345566434564211002437899999999987899
Q ss_pred CEEEEEEEEEEEECCEEEEEEEEEECHHHCCCCCEEEHHEEEEEEEEEECEEEECCCCCCCHHHHHHHHHCCC
Q ss_conf 2899788779841887999999798477678997382420554399980203312334866689999985589
Q gi|254780374|r 166 NLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238 (238)
Q Consensus 166 nL~I~G~k~i~vn~e~~~i~isGiVRp~DI~~~NtV~S~~iAda~I~y~g~G~~~d~~~~gwl~r~~~~i~Pl 238 (238)
T Consensus 159 NLvI~G~k~v~vN~e~e~i~vsGiVRP~DI~~~Ntv~s~~iAdarI~Y~G~G~l~d~q~pgW~~r~~~~i~PF 231 (231)
T PRK12788 159 NLLISGSQEVRVNYEMRVLNVGGIVRPLDITRNNTIAYEKVAEARISYGGRGRLMEVQQPAWGHQVYDQVVPF 231 (231)
T ss_pred CEEEEEEEEEEECCCEEEEEEEEEECHHHCCCCCEECCCEEEEEEEEECCEEEECCCCCCCHHHHHHHHCCCC
T ss_conf 5899999999988986999999998879979997498212256899980203236222659999998760899