BLAST/PSIBLAST alignment of GI: 254780374 and GI: 116250486 at iteration 1
>gi|116250486|ref|YP_766324.1| flagellar basal body L-ring protein [Rhizobium leguminosarum bv. viciae 3841] Length = 238
>gi|115255134|emb|CAK06208.1| putative flagellar L-ring protein precursor (basal body L-ring protein) [Rhizobium leguminosarum bv. viciae 3841] Length = 238
 Score =  242 bits (618), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 126/224 (56%), Positives = 157/224 (70%), Gaps = 4/224 (1%)

Query: 17  GCHS--SISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAALFKD 74
           GC S  ++SEI   P MSP+GS L    + P + +  K   +  + YSLW DS AALFKD
Sbjct: 17  GCQSPTAVSEIGRAPAMSPIGSGL-AYGQTPQMALYPKQPRAVAQGYSLWSDSQAALFKD 75

Query: 75  SRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDG 134
           +RALNVGDILTVDI+I+D+A FDN+T RSR NS          +FG  TP+   +L Y  
Sbjct: 76  ARALNVGDILTVDIQINDKASFDNETNRSRTNSSGMNWDVNAQIFGW-TPESKTDLTYGS 134

Query: 135 GGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQD 194
             ++ GKG I R +KL LL+AA+VT ILENGNL+ISGSQEVR+N E+R LNV GIVRPQD
Sbjct: 135 DTSTDGKGKIERTDKLTLLVAAVVTGILENGNLVISGSQEVRLNQELRILNVAGIVRPQD 194

Query: 195 VDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
           V+A N +SYDKIAEARISYGG+GR  E+ +PP G Q ++  SPL
Sbjct: 195 VNADNQISYDKIAEARISYGGRGRLMEVQQPPRGQQAVDLFSPL 238