RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780374|ref|YP_003064787.1| flagellar basal body L-ring
protein [Candidatus Liberibacter asiaticus str. psy62]
         (238 letters)



>gnl|CDD|178946 PRK00249, flgH, flagellar basal body L-ring protein; Reviewed.
          Length = 222

 Score =  218 bits (558), Expect = 1e-57
 Identities = 85/228 (37%), Positives = 121/228 (53%), Gaps = 14/228 (6%)

Query: 14  LLFGC--HSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKSYSLWRDSHAAL 71
           LL GC     +  + G P  +P+ +     N           + S  ++ SLW   +  L
Sbjct: 6   LLAGCASIPRLPLVGGAPAAAPVEAPTPLPNP--------APNGSIFQAGSLWNYGYQPL 57

Query: 72  FKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG-QQTPQMNGNL 130
           FKD RA NVGDILTV ++ +  A   N T RSR++S +    G  SLFG       N +L
Sbjct: 58  FKDRRARNVGDILTVVLQENTSASKSNSTNRSRDSSTN---FGLPSLFGYLNGLDANASL 114

Query: 131 NYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIV 190
                 +  GKGS SR+  L   I   VT +L NGNL+I G +EVRVN     L V+G+V
Sbjct: 115 ETSSDNSFKGKGSASRSNTLTGTITVTVTQVLPNGNLVIRGEKEVRVNQGTEFLRVSGVV 174

Query: 191 RPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
           RP+D+   N++S  +IA+ARISYGG+G  ++  +P    +  ++LSP 
Sbjct: 175 RPRDISGDNTISSTRIADARISYGGRGYISDAQQPGWLQRFFDSLSPF 222


>gnl|CDD|171723 PRK12788, flgH, flagellar basal body L-ring protein; Reviewed.
          Length = 234

 Score =  176 bits (447), Expect = 5e-45
 Identities = 92/231 (39%), Positives = 136/231 (58%), Gaps = 17/231 (7%)

Query: 14  LLFGCHSSISEITGIPQMSPMGSSLDENNR-MPFLGIDFKNSDSTKKSYSLWRDSHAALF 72
            L GC +++++    P+MSP+G  L  + R +P          +     SLW D    L+
Sbjct: 15  ALAGCANNLADALQAPRMSPIGQGLRADARAIPVE----PRMRTPVSRRSLW-DERTDLY 69

Query: 73  KDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLS-----GGFSLFGQQTPQMN 127
           +D RA   GD+LTV I ++D+A  DN+T RSR++     L        +S  G+ T  ++
Sbjct: 70  RDPRASRTGDLLTVTISMNDKATLDNKTDRSRDSQTKFGLDYLAEFLPWSDKGKLTANVS 129

Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
                    ++ G G I R E++   +AAIV  +L NGNL+ISGSQEVRVN E+R LNV 
Sbjct: 130 SQ------TSTKGTGKIDRTEEVKFSVAAIVVDVLPNGNLLISGSQEVRVNYEMRVLNVG 183

Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPIGHQLIENLSPL 238
           GIVRP D+  +N+++Y+K+AEARISYGG+GR  E+ +P  GHQ+ + + P 
Sbjct: 184 GIVRPLDITRNNTIAYEKVAEARISYGGRGRLMEVQQPAWGHQVYDQVVPF 234


>gnl|CDD|171670 PRK12696, flgH, flagellar basal body L-ring protein; Reviewed.
          Length = 236

 Score = 97.5 bits (243), Expect = 3e-21
 Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 29/250 (11%)

Query: 1   MYRYSFIVLCYSSLLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKKS 60
             R     L    LL GC ++  + +  P ++P  + ++        G  F +S++    
Sbjct: 2   RKRLLATSLAVL-LLAGCSAARQQPSPAPPVTPPPAYVEPEEPADNPGSLFSDSEAD--- 57

Query: 61  YSLWRDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFG 120
                     LF DSRA  VGDI+ V I  + +A     T   + ++    +S   + FG
Sbjct: 58  ---------LLFADSRARRVGDIVLVKIVENSKAKNKADTTADKKSTNEYGVS---AFFG 105

Query: 121 QQTPQMNGNLNYDGGGAS-------------SGKGSISRAEKLNLLIAAIVTAILENGNL 167
           Q +  +N      GGG               SG G   R   +   IAA V  +L  G +
Sbjct: 106 QDSVAINPFNPLMGGGVGTDPLLKTSSTSKFSGTGETKRESTVTATIAARVVRVLPGGLM 165

Query: 168 IISGSQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELLRPPI 227
            + G++E RVNDE + + V+G+VRP+D+   NSV   ++A+ARI Y GKG   +  RP  
Sbjct: 166 QVEGARETRVNDETQYIVVSGLVRPRDIGPDNSVMSTQLADARIEYYGKGVLADKQRPGW 225

Query: 228 GHQLIENLSP 237
             +L++N+ P
Sbjct: 226 FTRLMDNVWP 235


>gnl|CDD|183690 PRK12698, flgH, flagellar basal body L-ring protein; Reviewed.
          Length = 224

 Score = 86.3 bits (214), Expect = 6e-18
 Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 12/166 (7%)

Query: 62  SLWRDSHAA-LFKDSRALNVGDILTVDIRIDDQA--VFDNQTGRSRNNSLHRKLSGGFSL 118
           S+++DS A  L+ D +A  VGDI+TV ++   QA    +N+  +  + SL    +GG ++
Sbjct: 47  SIFQDSQANSLYSDIKAHKVGDIITVVLKESTQAKKSANNEIKKGSDLSLDPIYAGGGNV 106

Query: 119 FGQQTPQMNGN---LNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
                  + G    L Y     +  +    ++  L+  I+A V  +L NGNL+I G + +
Sbjct: 107 ------SIGGVPLDLGYKDSMNTKRESDADQSNSLSGSISANVMQVLPNGNLVIRGEKWI 160

Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTE 221
            +N+    + +TGIVR QD+   N++   ++A ARI Y G G   +
Sbjct: 161 SINNGDEFIRLTGIVRSQDITPDNTIDSTRVANARIQYSGTGTFAD 206


>gnl|CDD|183691 PRK12701, flgH, flagellar basal body L-ring protein; Reviewed.
          Length = 230

 Score = 81.0 bits (199), Expect = 3e-16
 Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 19/223 (8%)

Query: 1   MYRYSFIVLCYSS-LLFGCHSSISEITGIPQMSPMGSSLDENNRMPFLGIDFKNSDSTKK 59
           M R +  V C ++ LLFGC +      G           D  +  P   +     +  K 
Sbjct: 1   MNRLNIAVSCLATALLFGCEALHPPAPG-----------DNPDYAPTYPVTPDPKELRKV 49

Query: 60  SYSLWRDSHA-ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL 118
           S +++    A  LF+  RA + GDILTV + I+      N T   R N   +  +  F  
Sbjct: 50  SGAIYSSETALPLFETPRARHPGDILTVYL-IEKTDAQKNATTTQRKNDTTKITNKLF-- 106

Query: 119 FGQQTPQMNG---NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
            G+     +G   + + D     +G+G   +  KL   I+  V  +L NGN+++ G + V
Sbjct: 107 LGRPISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVVQGEKWV 166

Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGR 218
           R+N     + ++GIVRPQD+ A N+++ D+IA ARISYGG G+
Sbjct: 167 RINQGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQ 209


>gnl|CDD|183507 PRK12407, flgH, flagellar basal body L-ring protein; Reviewed.
          Length = 221

 Score = 78.4 bits (193), Expect = 1e-15
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 13/152 (8%)

Query: 70  ALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNG- 128
           +L +D RA  VGDILTV +    Q+    +T   + N +     G   + G++  ++ G 
Sbjct: 57  SLLQDRRAYRVGDILTVILDESTQSSKQAKTNFGKKNDVS---LGVPEVLGKKLDKLGGS 113

Query: 129 ---NLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLN 185
                ++DG   S+ +  + R       I   V  +L NG L+I G + + +N     + 
Sbjct: 114 ISGKRDFDGSATSAQQNML-RGS-----ITVAVHQVLPNGVLVIRGEKWLTLNQGDEYMR 167

Query: 186 VTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
           VTG+VR  D+   NSVS  +IA ARISY G+G
Sbjct: 168 VTGLVRADDIARDNSVSSQRIANARISYAGRG 199


>gnl|CDD|139164 PRK12700, flgH, flagellar basal body L-ring protein; Reviewed.
          Length = 230

 Score = 78.2 bits (192), Expect = 2e-15
 Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 15/159 (9%)

Query: 71  LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQ----- 125
           LF+D R  NVGDI+T+        V + +T  ++  + +    G  +L     P+     
Sbjct: 64  LFEDRRPRNVGDIVTI--------VLEEKTNAAKGVATNTSRDGSATLGVAAAPRFMDGV 115

Query: 126 MNGNLNYD--GGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRS 183
           +N  L+ D  GG  ++G G  S        I   V  +L NGNL I+G +++ +N     
Sbjct: 116 INDKLDTDISGGNTANGTGKSSANNTFTGTITTTVIGVLPNGNLQIAGEKQIAINRGSEY 175

Query: 184 LNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTEL 222
           +  +G+V P+ +   N+VS  ++A+ARI Y  KG   E+
Sbjct: 176 VRFSGVVDPRSITGSNTVSSTRVADARIEYRSKGVMDEV 214


>gnl|CDD|183689 PRK12697, flgH, flagellar basal body L-ring protein; Reviewed.
          Length = 226

 Score = 77.2 bits (190), Expect = 3e-15
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 71  LFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKL-SGGF--SLFGQQTPQMN 127
           LF+D R  NVGDILT+ I  +  A   +    +R  +    + + GF   LF +      
Sbjct: 62  LFEDQRPRNVGDILTIVIAENINATKSSGANTNRQGNTDFDVPTAGFLGGLFNK------ 115

Query: 128 GNLNYDGGGASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVT 187
            NL+  G    +  G  S A   N  I   VT +L NGNL++SG +++ +N     +  +
Sbjct: 116 ANLSAQGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFS 175

Query: 188 GIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTE 221
           G+V P  +   NSV   ++A+ARI Y  KG   E
Sbjct: 176 GVVNPNTISGANSVYSTQVADARIEYSAKGYINE 209


>gnl|CDD|105864 PRK12699, flgH, flagellar basal body L-ring protein; Reviewed.
          Length = 246

 Score = 61.1 bits (148), Expect = 2e-10
 Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)

Query: 65  RDSHAALFKDSRALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSL-----F 119
           R  +  LF+D RA  +GD + V        + + +T  S+ +  + + +G  SL      
Sbjct: 75  RGRYHPLFEDRRARQIGDTIIV--------LLNEKTNASKKSGSNAQRNGDISLSVPSFL 126

Query: 120 GQQTPQMNGNLNYDGGGASS----GKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEV 175
           G     +  +L  D   +SS    GKG  S        I   V  IL NGNL++SG +++
Sbjct: 127 GLPFKSIFQDL--DLEASSSNKFDGKGESSSNNNFTGTITVTVVDILPNGNLLVSGEKQI 184

Query: 176 RVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTE 221
            +N     + ++G++ P +V  +N+VS  ++A+ARI Y G G   E
Sbjct: 185 GINQGHEFIRLSGVINPINV-INNTVSSIQVADARIEYRGNGYLDE 229


>gnl|CDD|184074 PRK13477, PRK13477, bifunctional pantoate ligase/cytidylate kinase;
           Provisional.
          Length = 512

 Score = 33.7 bits (78), Expect = 0.039
 Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 37/117 (31%)

Query: 135 GGASSGKGSISR--AEKLNLL-----------------------IAAIVTAILENGNLII 169
           G A +GK +++R  A+KL LL                           +  +L +  + +
Sbjct: 291 GPAGAGKSTVTRAVAKKLGLLYLDTGAMYRAVTWLVLQEGIDPQDEEALAELLSDLKIEL 350

Query: 170 S----GSQEVRVN-----DEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKG 217
                  Q V +N     + IRS  VT  V    + A  +V    + + +   G KG
Sbjct: 351 KPSSGSPQRVWINGEDVTEAIRSPEVTSSVSA--IAAQPAVRQALVKQQQ-RIGEKG 404


>gnl|CDD|140318 PTZ00297, PTZ00297, pantothenate kinase; Provisional.
          Length = 1452

 Score = 28.3 bits (63), Expect = 1.9
 Identities = 7/41 (17%), Positives = 17/41 (41%), Gaps = 4/41 (9%)

Query: 4   YSFIVLCYSS----LLFGCHSSISEITGIPQMSPMGSSLDE 40
           +SF+ L   +    L +  +SSI  +        + +  ++
Sbjct: 367 FSFMSLVLCAAVWLLRWAQNSSIHPLLSERPFLTVEALKEK 407


>gnl|CDD|172418 PRK13898, PRK13898, type IV secretion system ATPase VirB4;
           Provisional.
          Length = 800

 Score = 27.8 bits (62), Expect = 2.8
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 4/33 (12%)

Query: 42  NRMPFLGIDFKNSDSTKKSYSLWRD--SHAALF 72
           N + FLGID    ++     ++W    SHAA+F
Sbjct: 565 NLVAFLGID--GPNTLAGRIAMWHGKGSHAAIF 595


>gnl|CDD|129567 TIGR00475, selB, selenocysteine-specific elongation factor SelB.
           In prokaryotes, the incorporation of selenocysteine as
           the 21st amino acid, encoded by TGA, requires several
           elements: SelC is the tRNA itself, SelD acts as a donor
           of reduced selenium, SelA modifies a serine residue on
           SelC into selenocysteine, and SelB is a
           selenocysteine-specific translation elongation factor.
           3-prime or 5-prime non-coding elements of mRNA have been
           found as probable structures for directing
           selenocysteine incorporation. This model describes the
           elongation factor SelB, a close homolog rf EF-Tu. It may
           function by replacing EF-Tu. A C-terminal domain not
           found in EF-Tu is in all SelB sequences in the seed
           alignment except that from Methanococcus jannaschii.
           This model does not find an equivalent protein for
           eukaryotes.
          Length = 581

 Score = 27.1 bits (60), Expect = 3.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 172 SQEVRVNDEIRSLNVTGIVRPQDVDAHNSVSYDKIAEARIS 212
           S EV+V D +R L +   VR + + A N       A  RI+
Sbjct: 200 SGEVKVGDNLRLLPINHEVRVKAIQAQNQDVEIAYAGQRIA 240


>gnl|CDD|179417 PRK02382, PRK02382, dihydroorotase; Provisional.
          Length = 443

 Score = 26.9 bits (60), Expect = 4.6
 Identities = 9/25 (36%), Positives = 11/25 (44%)

Query: 68 HAALFKDSRALNVGDILTVDIRIDD 92
            AL KD R      +   D+RID 
Sbjct: 2  RDALLKDGRVYYNNSLQPRDVRIDG 26


>gnl|CDD|178800 PRK00023, cmk, cytidylate kinase; Provisional.
          Length = 225

 Score = 26.6 bits (60), Expect = 5.7
 Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 2/20 (10%)

Query: 135 GGASSGKGSISR--AEKLNL 152
           G A SGKG++++  A+KL  
Sbjct: 11  GPAGSGKGTVAKILAKKLGF 30


>gnl|CDD|168377 PRK06072, PRK06072, enoyl-CoA hydratase; Provisional.
          Length = 248

 Score = 26.7 bits (59), Expect = 5.8
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 8/72 (11%)

Query: 143 SISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVDAH-NSV 201
           ++SR +KLN L        LE  N  IS  +++  + +IR + VTG  R   V A  +  
Sbjct: 14  TMSRPDKLNALN-------LEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEF 66

Query: 202 SYDKIAEARISY 213
           + D   + R ++
Sbjct: 67  APDFAIDLRETF 78


>gnl|CDD|181909 PRK09496, trkA, potassium transporter peripheral membrane
           component; Reviewed.
          Length = 453

 Score = 26.6 bits (60), Expect = 5.9
 Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 1/40 (2%)

Query: 143 SISRAEKLNLLIAAIVTAILENGNLII-SGSQEVRVNDEI 181
            +S   +    I   V AI   G LII  G   +   DE+
Sbjct: 169 PLSDLREHFPDIDVRVVAIFRGGRLIIPRGDTVIEAGDEV 208


>gnl|CDD|182032 PRK09695, PRK09695, glycolate transporter; Provisional.
          Length = 560

 Score = 26.6 bits (58), Expect = 6.0
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 7/69 (10%)

Query: 165 GNLIISGSQEVRVNDEIR-SLNVTGIVRPQDVDAHNSVSYDKIAEARISYGGKGRTTELL 223
           G+L  + +Q++ V+D +  + N +G V  +       +S   IA A  + G  GR +EL 
Sbjct: 476 GSLQSTTAQQINVSDTLLVAANTSGGVTGK------MISPQSIAVACAATGMVGRESELF 529

Query: 224 RPPIGHQLI 232
           R  + H LI
Sbjct: 530 RYTVKHSLI 538


>gnl|CDD|172734 PRK14246, PRK14246, phosphate ABC transporter ATP-binding protein;
           Provisional.
          Length = 257

 Score = 26.2 bits (57), Expect = 7.4
 Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 25/142 (17%)

Query: 77  ALNVGDILTVDIRIDDQAVFDNQTGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGG 136
           A +V +I  + + I+D+A+  + T +  NN          S+FG   P            
Sbjct: 7   AEDVFNISRLYLYINDKAILKDITIKIPNN----------SIFGIMGP------------ 44

Query: 137 ASSGKGSISRAEKLNLLIAAIVTAILENGNLIISGSQEVRVNDEIRSLNVTGIVRPQDVD 196
             SG G  +  + LN LI    + I  +G ++  G    ++ D I+     G+V  Q   
Sbjct: 45  --SGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQI-DAIKLRKEVGMVFQQPNP 101

Query: 197 AHNSVSYDKIAEARISYGGKGR 218
             +   YD IA    S+G K +
Sbjct: 102 FPHLSIYDNIAYPLKSHGIKEK 123


>gnl|CDD|162353 TIGR01426, MGT, glycosyltransferase, MGT family.  This model
           describes the MGT (macroside glycosyltransferase)
           subfamily of the UDP-glucuronosyltransferase family.
           Members include a number of glucosyl transferases for
           macrolide antibiotic inactivation, but also include
           transferases of glucose-related sugars for macrolide
           antibiotic production.
          Length = 392

 Score = 26.2 bits (58), Expect = 7.5
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 3/35 (8%)

Query: 192 PQDVDAHNSVSYDKI---AEARISYGGKGRTTELL 223
           P +V+    V   +I   A+A I++GG   T E L
Sbjct: 274 PPNVEVRQWVPQLEILKKADAFITHGGMNSTMEAL 308


>gnl|CDD|185135 PRK15213, PRK15213, fimbrial outer membrane usher protein PefC;
           Provisional.
          Length = 797

 Score = 25.9 bits (57), Expect = 9.8
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)

Query: 100 TGRSRNNSLHRKLSGGFSLFGQQTPQMNGNLNYDGGGASSGKGSIS 145
           T R R+      L+  +        Q NG L++ GGG +SG  S+S
Sbjct: 586 TNRDRDGGRSSSLNASYGF---DRAQTNGMLSHQGGGNTSGSVSVS 628


>gnl|CDD|179920 PRK05054, PRK05054, exoribonuclease II; Provisional.
          Length = 644

 Score = 26.0 bits (58), Expect = 10.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 64  WRDSHAALFKDS 75
           WR  HA +FKD 
Sbjct: 351 WRKQHALVFKDR 362


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.316    0.134    0.381 

Gapped
Lambda     K      H
   0.267   0.0696    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 3,823,968
Number of extensions: 237582
Number of successful extensions: 460
Number of sequences better than 10.0: 1
Number of HSP's gapped: 446
Number of HSP's successfully gapped: 26
Length of query: 238
Length of database: 5,994,473
Length adjustment: 91
Effective length of query: 147
Effective length of database: 4,028,145
Effective search space: 592137315
Effective search space used: 592137315
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (25.4 bits)