HHsearch alignment for GI: 254780375 and conserved domain: PRK07194
>PRK07194 fliG flagellar motor switch protein G; Reviewed.
Probab=97.30 E-value=0.0013 Score=42.18 Aligned_cols=67 Identities=10% Similarity=0.153 Sum_probs=58.7
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHH
Q ss_conf 9999999951998999999963798999999972998999999962999999999999952711214
Q gi|254780375|r 104 NKNILDIYKKMDSDSAALQLEQIDPDISSHILMRLSPRQSSLIMSKMNPKSATMITNVVANMLKFKK 170 (175)
Q Consensus 104 ~~~lv~iy~~M~p~~AA~il~~m~~d~aa~iL~~m~~~~~a~IL~~M~p~~Aa~it~~la~~~~~~~ 170 (175)
T Consensus 105 ~~~~~~~L~~~dp~~La~~L~~EhPQtiAlILs~L~~~~AA~VL~~Lp~~~~~evi~Ria~l~~v~p 171 (334)
T PRK07194 105 IRHKMQRLQWVDPQQLARLIANEHLQMQAVFLAFLPPESAAAVLKYLPEDRQDDILYRIAQLDDVDR 171 (334)
T ss_pred CCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH
T ss_conf 4567899867999999999873485799999980899999999997899989999999974478999