HHsearch alignment of GI: 254780375 and MMDB domain: 1lkv_X_1-65
>1lkv_X (X:1-65) Flagellar motor switch protein FLIG; chemotaxis, flagellar motion, structural protein; 2.80A {Thermotoga maritima}
Probab=96.96 E-value=0.0017 Score=41.06 Aligned_cols=61 Identities=15% Similarity=0.190 Sum_probs=55.2
Q ss_pred HHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC
Q ss_conf 9999951998999999963798999999972998999999962999999999999952711
Q gi|254780375|r 107 ILDIYKKMDSDSAALQLEQIDPDISSHILMRLSPRQSSLIMSKMNPKSATMITNVVANMLK 167 (175)
Q Consensus 107 lv~iy~~M~p~~AA~il~~m~~d~aa~iL~~m~~~~~a~IL~~M~p~~Aa~it~~la~~~~ 167 (175)
.-+....|+|+.-+.+|..=.+.+.|-||+.|+|+++++||..++++...++..-++++.+
T Consensus 4 ~~~~L~~~~~~~l~~~l~~EhPQ~iAliLs~L~p~~AA~VL~~lp~~~r~dv~~Ria~l~~ 64 (65)
T 1lkv_X 4 PFSFVRDTDPVQLVNFLQSEHPQTIAVVLSYLDPPVAAQILGALPEELQTEVLKRIALLER 64 (65)
T ss_dssp --------CCTHHHHHHHTSCHHHHHHHHTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCC
T ss_conf 4899873999999999982899999999971998999999997999999999998531234