HHsearch alignment of GI: 254780375 and MMDB domain: 1lkv_X_1-65

>1lkv_X (X:1-65) Flagellar motor switch protein FLIG; chemotaxis, flagellar motion, structural protein; 2.80A {Thermotoga maritima}
Probab=94.85  E-value=0.066  Score=31.03  Aligned_cols=48  Identities=15%  Similarity=0.334  Sum_probs=35.9

Q ss_pred             HHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHC
Q ss_conf             999999999519989999999637989999999729989999999629
Q gi|254780375|r  103 YNKNILDIYKKMDSDSAALQLEQIDPDISSHILMRLSPRQSSLIMSKM  150 (175)
Q Consensus       103 ~~~~lv~iy~~M~p~~AA~il~~m~~d~aa~iL~~m~~~~~a~IL~~M  150 (175)
                      .-+.++.+..+=.|.-.|-+|+.|+++.|+.||..++++...+|+..|
T Consensus        12 ~~~~l~~~l~~EhPQ~iAliLs~L~p~~AA~VL~~lp~~~r~dv~~Ri   59 (65)
T 1lkv_X           12 DPVQLVNFLQSEHPQTIAVVLSYLDPPVAAQILGALPEELQTEVLKRI   59 (65)
T ss_dssp             CCTHHHHHHHTSCHHHHHHHHTTSCHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             999999999828999999999719989999999979999999999985