HHsearch results for GI: 254780375 and protein with PDBid: 3hjl_A

>3hjl_A Flagellar motor switch protein FLIG; armadillo repeat motif, superhelix, conformational plasticit repeat, torque generation; 2.40A {Aquifex aeolicus}
Probab=97.39  E-value=0.0021  Score=39.58  Aligned_cols=68  Identities=22%  Similarity=0.288  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHH
Q ss_conf             99999999951998999999963798999999972998999999962999999999999952711214
Q gi|254780375|r  103 YNKNILDIYKKMDSDSAALQLEQIDPDISSHILMRLSPRQSSLIMSKMNPKSATMITNVVANMLKFKK  170 (175)
Q Consensus       103 ~~~~lv~iy~~M~p~~AA~il~~m~~d~aa~iL~~m~~~~~a~IL~~M~p~~Aa~it~~la~~~~~~~  170 (175)
                      ...+..+.++.|+|+.-+..|..=.+.+.+-||+.|+|++++.||+.++++...++..-|+++...+.
T Consensus       105 ~~~~~~~~L~~~~~~~La~~L~~EhPQtiAliLs~L~~~~AA~VL~~Lp~~~r~eVv~Ria~l~~v~~  172 (329)
T 3hjl_A          105 DAEKILKEIEKVDSRILASLLKNEHPQTIALFLSQLSPKKSAEIIQNLPEELKKEVVKRIATLENVNV  172 (329)
T ss_dssp             HHHHHHHHHHTSCHHHHHHHHTTSCHHHHHHHHTTSCHHHHHHHHHTSCHHHHHHHHHHHHHCSCCCH
T ss_pred             CCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH
T ss_conf             63457899874998999999874781599999993899999999986999889999999974479999