HHsearch results for GI: 254780375 and protein with PDBid: 3hjl_A
>3hjl_A Flagellar motor switch protein FLIG; armadillo repeat motif, superhelix, conformational plasticit repeat, torque generation; 2.40A {Aquifex aeolicus}
Probab=97.39 E-value=0.0021 Score=39.58 Aligned_cols=68 Identities=22% Similarity=0.288 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999999951998999999963798999999972998999999962999999999999952711214
Q gi|254780375|r 103 YNKNILDIYKKMDSDSAALQLEQIDPDISSHILMRLSPRQSSLIMSKMNPKSATMITNVVANMLKFKK 170 (175)
Q Consensus 103 ~~~~lv~iy~~M~p~~AA~il~~m~~d~aa~iL~~m~~~~~a~IL~~M~p~~Aa~it~~la~~~~~~~ 170 (175)
...+..+.++.|+|+.-+..|..=.+.+.+-||+.|+|++++.||+.++++...++..-|+++...+.
T Consensus 105 ~~~~~~~~L~~~~~~~La~~L~~EhPQtiAliLs~L~~~~AA~VL~~Lp~~~r~eVv~Ria~l~~v~~ 172 (329)
T 3hjl_A 105 DAEKILKEIEKVDSRILASLLKNEHPQTIALFLSQLSPKKSAEIIQNLPEELKKEVVKRIATLENVNV 172 (329)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHTTSCHHHHHHHHTTSCHHHHHHHHHTSCHHHHHHHHHHHHHCSCCCH
T ss_pred CCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH
T ss_conf 63457899874998999999874781599999993899999999986999889999999974479999