HHSEARCH alignment of GI: 254780375 and SCOP domain: d1lkvx_

Alignment

Probab=97.21  E-value=0.00026  Score=43.74  Aligned_cols=51  Identities=16%  Similarity=0.333  Sum_probs=34.4

Q ss_pred             HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHH
Q ss_conf             999999519989999999637989999999729989999999629999999
Q gi|254780375|r  106 NILDIYKKMDSDSAALQLEQIDPDISSHILMRLSPRQSSLIMSKMNPKSAT  156 (175)
Q Consensus       106 ~lv~iy~~M~p~~AA~il~~m~~d~aa~iL~~m~~~~~a~IL~~M~p~~Aa  156 (175)
                      .+++..+...|+.+|.+|+.|+++.+++||..++++....|+..|++....
T Consensus         4 ~la~~l~~e~p~~~A~iL~~L~~d~aa~vL~~L~~~~~~~il~~l~~~~~~   54 (213)
T d1lkvx_           4 QLVNFLQSEHPQTIAVVLSYLDPPVAAQILGALPEELQTEVLKRIALLERT   54 (213)
T ss_dssp             HHHHHHHTSCHHHHHHHHTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
T ss_conf             999999806999999999729988999999969999999999960500233

SCOP domain information

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: FliG
family: FliG
domain: FliG
species: Thermotoga maritima [TaxId: 2336]