HHsearch alignment for GI: 254780376 and conserved domain: PRK05303
>PRK05303 flgI flagellar basal body P-ring protein; Provisional.
Probab=100.00 E-value=0 Score=980.45 Aligned_cols=361 Identities=51% Similarity=0.793 Sum_probs=340.6
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 67899999999997425700100100013640001430267878876388999887746899999999998297457321
Q gi|254780376|r 2 IFRIAFLIFSLIGLHEISAQVVSRIKDVVSLQSGRDNQLIGYGLVVGLQGTGDSLRSSPFTEQSMRSLLQNLGISTPGGR 81 (369)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~~~a~rikDi~~i~GvR~NqL~GyGLVVGL~GTGD~~~~~~~t~qsl~nml~~~Gv~~~~~~ 81 (369)
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~a~RIKDia~i~GvR~NqLiGYGLVVGL~GTGD~~~~~~fT~qsl~nmL~~~Gv~v~~-~ 82 (368)
T PRK05303 4 MLMLLLLLLLLLLLLLAAPAQAERIKDLASIQGVRDNQLIGYGLVVGLDGTGDQTTQTPFTTQSLANMLEQLGVNVPP-N 82 (368)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC-C
T ss_conf 899999999999998443566655542210410355354778899822877888777632799999999974987898-7
Q ss_pred CCCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECCEEECCCCCCC-CCCCCCC
Q ss_conf 465532699999971787756876899995688845444777999521477861899981616833432456-7652004
Q gi|254780376|r 82 LGSKNVAAVMVTANLPPFASPGSRIDVSINSLGDASSLRGGILVMTSLLGADGNIYAVAQGSVVVSGLFVKG-QSSSFME 160 (369)
Q Consensus 82 ~~~kNvAaVmVtA~lPpfa~~G~~iDv~VSSiGdAkSL~GG~LL~TpL~g~dg~vyAvAQG~i~vgg~~~~g-~~~~~~~ 160 (369)
T Consensus 83 ~~~kNvAAVmVTA~LPpFa~~G~~iDVtVSSiGDAkSL~GGtLL~TPL~gaDg~vYAvAQG~v~vgG~~a~g~~g~~~~~ 162 (368)
T PRK05303 83 PKLKNVAAVMVTATLPPFAKPGQRIDVTVSSIGDAKSLRGGTLLMTPLKGADGQVYAVAQGNLVVGGFGAEGADGSSVTV 162 (368)
T ss_pred CCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEECCEEECCCCCCCCCCCCEEE
T ss_conf 66551689999950588778997588999766676567897788602458998689994076676154234577752222
Q ss_pred CCCCCEEEECCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEECCCCC-CHH
Q ss_conf 7654217416548874135432477649999507887899999999987520245654124511563686328875-212
Q gi|254780376|r 161 GISTGGKIVNGAIVERELPKKFKDSADLILQLRNPDFSTAIRIADQINSYSLNRFSRPIAEAYDSRTVKVSKPTNI-DLT 239 (369)
Q Consensus 161 n~~t~GrIp~Ga~VErev~~~f~~~~~l~L~L~~pdfttA~~ia~aIN~~~~~~~g~~~A~a~d~~~I~v~~P~~~-~~v 239 (369)
T Consensus 163 n~pt~GrIp~GA~VErev~~~~~~~~~i~L~L~~pDFtTA~ri~~aIN~~----~g~~~A~a~D~~tV~v~~P~~~~~~v 238 (368)
T PRK05303 163 NVPTVGRIPNGAIVEREVPSDFGQGDSLTLNLRNPDFTTAQRIADAINRL----FGPGVATALDARTVQVRAPADPSQRV 238 (368)
T ss_pred CCCCEEEECCCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH----CCCCCEEEECCCEEEEECCCCCCCHH
T ss_conf 67543685287189972677767887499995686658999999999986----18896497379889996688877578
Q ss_pred HHHHHHHCCCCCC-CCCCEEEEECCCCEEEECCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEC
Q ss_conf 1322322012687-898359994476349945973998999841707999637766657765456873442366414560
Q gi|254780376|r 240 RLMSEVEMLTVET-DTPARVIINERTGTIVIGDNVRISKVVVSYGNLTVQITENEQVVQPNAFSSNGSTVTQNNTDLKVS 318 (369)
Q Consensus 240 ~fla~ie~l~V~~-~~~akVVINerTGTIV~g~~V~I~pvaVsHGnLtI~I~~~~~vsqp~~~~~~g~t~~~~~t~i~v~ 318 (369)
T Consensus 239 ~fla~ie~l~V~~~~~~arVVINeRTGTIV~g~~Vri~~vaVshGnLtv~I~~~~~vsQP~pf-~-G~t~v~~~t~i~v~ 316 (368)
T PRK05303 239 AFLARIENLEVEPGDAPAKVVINERTGTIVMGQDVRVSPVAVSHGNLTVTITEQPQVSQPNPF-G-GQTVVTPQTQIEVE 316 (368)
T ss_pred HHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCEEEEEEEEEECCEEEEECCCCCCCCCCCC-C-CCEEECCCCEEEEE
T ss_conf 999998577332587775699947854299679669967899608679998068632378887-8-85265368614774
Q ss_pred CCCCE-EEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEC
Q ss_conf 46735-8973898899999999847998789999999998716856258969
Q gi|254780376|r 319 DNKGS-FSLIDAPDLNSLISGMNSIGLKTDGIISILQGIKAAGALQSEIIIQ 369 (369)
Q Consensus 319 e~~~~-~~~~~~~tl~~lV~ALN~lG~tp~DlIsILqalk~aGAL~AELiI~ 369 (369)
T Consensus 317 e~~~~~~~~~~g~tl~~lV~aLN~lGatp~DlIaILqalk~aGAL~AeL~ii 368 (368)
T PRK05303 317 QEGGRLFVVPAGATLADLVRALNALGATPRDLIAILQALKAAGALHAELEVI 368 (368)
T ss_pred ECCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 0576069718999599999999866998799999999998768870789979