HHsearch alignment for GI: 254780376 and conserved domain: PRK12789
>PRK12789 flgI flagellar basal body P-ring protein; Reviewed.
Probab=100.00 E-value=0 Score=1010.57 Aligned_cols=367 Identities=54% Similarity=0.874 Sum_probs=354.7
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 67899999999997425700100100013640001430267878876388999887746899999999998297457321
Q gi|254780376|r 2 IFRIAFLIFSLIGLHEISAQVVSRIKDVVSLQSGRDNQLIGYGLVVGLQGTGDSLRSSPFTEQSMRSLLQNLGISTPGGR 81 (369)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~~~a~rikDi~~i~GvR~NqL~GyGLVVGL~GTGD~~~~~~~t~qsl~nml~~~Gv~~~~~~ 81 (369)
T Consensus 1 m~~~~~~~~~~~l~~~~~~~~a~RIkDi~~v~GvR~NqLiGYGLVVGL~GTGD~~~~~~fT~qsl~nmL~~~Gv~v~~~~ 80 (367)
T PRK12789 1 MIRRLLLAVLLALLAGPAAAAATRIKDIATLQGVRDNQLVGYGLVTGLQGTGDTLRNSQFTEQSLQSMLDRMGINVRDTR 80 (367)
T ss_pred CHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 90899999999998553066666564020040024435567789981388788877785289999999997696647888
Q ss_pred CCCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECCEEECCCCCCCCCCCCCCC
Q ss_conf 46553269999997178775687689999568884544477799952147786189998161683343245676520047
Q gi|254780376|r 82 LGSKNVAAVMVTANLPPFASPGSRIDVSINSLGDASSLRGGILVMTSLLGADGNIYAVAQGSVVVSGLFVKGQSSSFMEG 161 (369)
Q Consensus 82 ~~~kNvAaVmVtA~lPpfa~~G~~iDv~VSSiGdAkSL~GG~LL~TpL~g~dg~vyAvAQG~i~vgg~~~~g~~~~~~~n 161 (369)
T Consensus 81 ~~~kNvAAVmVTA~LPpfa~~G~~iDVtVSSiGDAkSL~GGtLL~TPL~g~DG~VYAvAQG~l~vgG~~~~g~g~~~~~n 160 (367)
T PRK12789 81 LRTRNVAAVMVTADLPPFIGPGSRIDVTVSSLGDATSLRGGTLLMTSLTGGDGQVYAVAQGALAVSGFSVQGQAESLTQG 160 (367)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECCEEEECCCCCCCCCCCCCC
T ss_conf 77642689999811787568998478999766566567896789852137998789995076887033234677653347
Q ss_pred CCCCEEEECCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEECCCCCCHHHH
Q ss_conf 65421741654887413543247764999950788789999999998752024565412451156368632887521213
Q gi|254780376|r 162 ISTGGKIVNGAIVERELPKKFKDSADLILQLRNPDFSTAIRIADQINSYSLNRFSRPIAEAYDSRTVKVSKPTNIDLTRL 241 (369)
Q Consensus 162 ~~t~GrIp~Ga~VErev~~~f~~~~~l~L~L~~pdfttA~~ia~aIN~~~~~~~g~~~A~a~d~~~I~v~~P~~~~~v~f 241 (369)
T Consensus 161 ~pT~GrIp~Ga~VEr~v~~~~~~~~~l~l~L~~pDFtTA~ria~aIN~~~~~~~g~~~A~a~d~~tV~v~~P~~~~~v~f 240 (367)
T PRK12789 161 VPTAGRIPNGALIEREVPGTLRDLPELVLELKNPDFKTATQISDAINAYSLGRYGRRVASERDQRTVVLSRPRQIGPTRF 240 (367)
T ss_pred CCCEEEECCCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHH
T ss_conf 86704844860899725777678872999945977799999999986551123685756746896379817999788999
Q ss_pred HHHHHCCCCCCCCCCEEEEECCCCEEEECCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEEECCCC
Q ss_conf 22322012687898359994476349945973998999841707999637766657765456873442366414560467
Q gi|254780376|r 242 MSEVEMLTVETDTPARVIINERTGTIVIGDNVRISKVVVSYGNLTVQITENEQVVQPNAFSSNGSTVTQNNTDLKVSDNK 321 (369)
Q Consensus 242 la~ie~l~V~~~~~akVVINerTGTIV~g~~V~I~pvaVsHGnLtI~I~~~~~vsqp~~~~~~g~t~~~~~t~i~v~e~~ 321 (369)
T Consensus 241 la~ie~l~V~p~~~ArVVINeRTGTIV~G~~VrIspvaVsHGnLtV~I~~~~~vsqP~pf-~~G~T~v~~~t~i~v~e~~ 319 (367)
T PRK12789 241 IAEIGDLTIEPDTPARVVIDQRTGTVVIGRNVQISTVAVTHGNLTVRVTEAPEVSQPAPF-SNGQTVVVPRTEIDANEEG 319 (367)
T ss_pred HHHHHCCCCCCCCCCEEEEECCCCEEEECCCEEEEEEEEEECCEEEEECCCCCCCCCCCC-CCCCEEECCCCEEEEECCC
T ss_conf 999756846789887799968853299689669978899508689998567534688866-8981362367445641277
Q ss_pred CEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEC
Q ss_conf 358973898899999999847998789999999998716856258969
Q gi|254780376|r 322 GSFSLIDAPDLNSLISGMNSIGLKTDGIISILQGIKAAGALQSEIIIQ 369 (369)
Q Consensus 322 ~~~~~~~~~tl~~lV~ALN~lG~tp~DlIsILqalk~aGAL~AELiI~ 369 (369)
T Consensus 320 ~~~~~~~g~tl~~lV~ALN~lGatp~DlIaILqalK~aGAL~AeLvIq 367 (367)
T PRK12789 320 GKLAILRGSDLQTLVRGLNQIGLKPSDIIAILQAIKTAGALQAELVVQ 367 (367)
T ss_pred CEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 346620799899999999866998799999999998768870799959