HHsearch alignment for GI: 254780377 and conserved domain: PRK12617
>PRK12617 flgA flagellar basal body P-ring biosynthesis protein FlgA; Reviewed.
Probab=100.00 E-value=4.5e-37 Score=224.03 Aligned_cols=144 Identities=24% Similarity=0.300 Sum_probs=135.0
Q ss_pred EEEEEHH----HHEEEEEECEEEEEEEEEEEEEEEECCCCCCCCHHHEEEEEEEHHHCCCCCCCCHHHHHCEEEECCCCC
Q ss_conf 1001021----020133102077886788877520048996618743799996820178421158677303012102270
Q gi|254780377|r 3 CVRFLLF----FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78 (152)
Q Consensus 3 ~~~f~~~----~sl~~~~~~~~~~~~~~~vvVa~r~I~~G~~I~~~Dl~~~~~~~~~~~~~~~~~~~~~iG~~a~r~i~~ 78 (152)
T Consensus 66 TV~VrC~~~~~W~iyVpv~V~----v~~~vvVaar~L~rG~~Ita~Dl~~~~~dl~~l~~g~~td~~~~iG~~~rr~l~a 141 (214)
T PRK12617 66 TVEVACPQPAGWRLFVPLKVR----RNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVLADPVAAVGKTARRILPA 141 (214)
T ss_pred EEEEECCCCCCEEEEEEEEEE----EEEEEEEECCCCCCCCCCCHHHCEEEEEEHHHCCCCCCCCHHHHCCHHEEECCCC
T ss_conf 899986999984999999999----9888999903139899958899389998254448763489889617433841589
Q ss_pred CCCCCHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEE
Q ss_conf 000156640232100379879999976978999999992448889779999889988899999729989999
Q gi|254780377|r 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 (152)
Q Consensus 79 G~~i~~~~l~~~~~V~~G~~V~i~~~~g~~~i~~~g~Al~~g~~Gd~IrV~N~~S~k~v~g~V~~~~~V~V~ 150 (152)
T Consensus 142 G~~l~~~~L~~p~lV~rG~~V~I~a~~~g~~V~~~G~Al~~G~~Gd~IrVrN~~S~rvV~g~V~~~G~V~V~ 213 (214)
T PRK12617 142 GSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRVVQGIVEASGTVVVS 213 (214)
T ss_pred CCCCCHHHCCCCCEECCCCEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEC
T ss_conf 896586764862138179989999956979999878980277889879999889997999999469689972