HHsearch alignment for GI: 254780377 and conserved domain: PRK12786
>PRK12786 flgA flagellar basal body P-ring biosynthesis protein FlgA; Reviewed.
Probab=100.00 E-value=2.3e-35 Score=214.62 Aligned_cols=148 Identities=27% Similarity=0.327 Sum_probs=138.7
Q ss_pred EEEEEHHH-------HEEEEEECEEEEEEEEEEEEEEEECCCCCCCCHHHEEEEEEEHHHCCCCCCCCHHHHHCEEEECC
Q ss_conf 10010210-------20133102077886788877520048996618743799996820178421158677303012102
Q gi|254780377|r 3 CVRFLLFF-------SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75 (152)
Q Consensus 3 ~~~f~~~~-------sl~~~~~~~~~~~~~~~vvVa~r~I~~G~~I~~~Dl~~~~~~~~~~~~~~~~~~~~~iG~~a~r~ 75 (152)
T Consensus 162 sgRf~a~~~va~~~g~~~~~lrvtG~a~~~v~VpVl~R~l~rGevI~~~Dv~~~r~~~~~~~~~~~~d~~~liG~~~Rr~ 241 (338)
T PRK12786 162 SGRFDATFEIAPAGGAAPVRLRVTGTAYETVEAPVLARAVGRGEVIKSSDVVWERRPKARVSGDDIASREDLVGMQARRA 241 (338)
T ss_pred CCCEEEEEEECCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCCCHHHEEEEEEEHHHCCCCCCCCCCCCCCEEEEEE
T ss_conf 88357899964689975246899889999897256735569988724688389980054468654568010421168652
Q ss_pred CCCCCCCCHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEE
Q ss_conf 270000156640232100379879999976978999999992448889779999889988899999729989999
Q gi|254780377|r 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 (152)
Q Consensus 76 i~~G~~i~~~~l~~~~~V~~G~~V~i~~~~g~~~i~~~g~Al~~g~~Gd~IrV~N~~S~k~v~g~V~~~~~V~V~ 150 (152)
T Consensus 242 l~aG~pir~~dl~~p~lV~RG~~Vtl~~~~~gl~lt~~G~Al~~G~~Gd~I~V~Nl~S~r~v~a~V~g~g~V~V~ 316 (338)
T PRK12786 242 LRAGQPLRGADLAKPDLVQRGQLVTLIYQTPGIYLTARGKALEDGAEGDVVRVLNLQSKRTVTGTVTGRGQVSVD 316 (338)
T ss_pred CCCCCCCCHHHCCCCCEEECCCEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEC
T ss_conf 369993046736887578469989999916978999998762577899979999889899899999728849987