HHsearch alignment of GI: 254780377 and MMDB domain: 1vli_A_301-385
>1vli_A (A:301-385) Spore coat polysaccharide biosynthesis protein SPSE; 2636322, structural genomics, JCSG, protein structure initiative, BSU37870, PSI; 2.38A {Bacillus subtilis}
Probab=97.97 E-value=7.4e-06 Score=51.40 Aligned_cols=60 Identities=13% Similarity=0.198 Sum_probs=47.5
Q ss_pred EEEEEEEECCCCCCCCHHHEEEEEEEHH---HCCCCCCCCHHHHH-CEEEECCCCCCCCCCHHHCCCC
Q ss_conf 8877520048996618743799996820---17842115867730-3012102270000156640232
Q gi|254780377|r 27 HAVVPSVVINAGEVLNESRLKEMQVTNS---NIRGNYAHSIKDVV-GLVTRRVLLPDHVIPLSVLHRP 90 (152)
Q Consensus 27 ~vvVa~r~I~~G~~I~~~Dl~~~~~~~~---~~~~~~~~~~~~~i-G~~a~r~i~~G~~i~~~~l~~~ 90 (152)
.-+|++++|++|++|+.+|+..++- .. .++.. ..++++ |+.++|++.+|++|..+|+...
T Consensus 16 rSiva~~di~kG~~lt~~~i~~kRP-g~~~~Gi~p~---~~~~vl~Gk~~~rdi~~g~~i~~~di~~~ 79 (85)
T 1vli_A 16 RGIFTTAPIQKGEAFSEDNIAVLRP-GQKPQGLHPR---FFELLTSGVRAVRDIPADTGIVWDDILLK 79 (85)
T ss_dssp CEEEESSCBCTTCBCCTTTEEEECC-TTSCCCBCGG---GHHHHHTTCBCSSCBCTTCBCCGGGTSCC
T ss_pred EEEEECCCCCCCCEECHHHEEEECC-CCCCCCCCHH---HHHHHHCCCEEECCCCCCCCCCHHHHCCC
T ss_conf 7999905208899955899578787-7888886989---99997679399160599897799990244