HHsearch results for GI: 254780377 and protein with PDBid: 3frn_A
>3frn_A Flagellar protein FLGA; structural genomics, periplasmic, PSI-2, protein structure initiative; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=9.3e-34 Score=204.52 Aligned_cols=133 Identities=21% Similarity=0.328 Sum_probs=128.3
Q ss_pred CEEEEEEEEEEEEEEEECCCCCCCCHHHEEEEEEEHHHCCCCCCCCHHHHHCEEEECCCCCCCCCCHHHCCCCCCCCCCC
Q ss_conf 20778867888775200489966187437999968201784211586773030121022700001566402321003798
Q gi|254780377|r 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA 97 (152)
Q Consensus 18 ~~~~~~~~~~vvVa~r~I~~G~~I~~~Dl~~~~~~~~~~~~~~~~~~~~~iG~~a~r~i~~G~~i~~~~l~~~~~V~~G~ 97 (152)
....+..+.+|+||+++|++|++|+++|+++++++.+.++.+++.+.++++|++++|+|.+|+||+.+||++|++|++||
T Consensus 135 ~~~~~r~~~~VvVa~r~I~~G~~It~~Dl~~~~~~~~~~~~~~~~~~~~viGk~a~r~i~~G~~i~~~~l~~~~~V~~G~ 214 (278)
T 3frn_A 135 LNMLLRKERNVVVLKRNINVGDVIKEEDVRLEKRNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADMVKDPPDVVKGQ 214 (278)
T ss_dssp EEEEEECEEEEEEESSCBCTTCBCCTTTEEEEEEEGGGCSSCBCSCHHHHTTCEESSCBCTTCBCBGGGEECCCSBCTTC
T ss_pred EEEEEEEEEEEEEECCCCCCCCEECHHHHCCEEEECCCCCCCCCCCHHHHCCEEECCCCCCCCCCCHHHCCCCCCCCCCC
T ss_conf 86578996579999444299999677770123753156897542797895892870356899946599836775147998
Q ss_pred EEEEEEECCCEEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEE
Q ss_conf 79999976978999999992448889779999889988899999729989999
Q gi|254780377|r 98 KVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150 (152)
Q Consensus 98 ~V~i~~~~g~~~i~~~g~Al~~g~~Gd~IrV~N~~S~k~v~g~V~~~~~V~V~ 150 (152)
.|.+.++.|+++|++.|+|+++|+.||.|+|+|++|||++.|+|.++|+|+|+
T Consensus 215 ~V~i~~~~g~i~i~~~g~Al~~G~~Gd~I~V~N~~S~k~i~g~V~~~g~V~Vi 267 (278)
T 3frn_A 215 VVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPVLRIL 267 (278)
T ss_dssp EEEEEC-------CEEEEESSCBCTTCEEEEEC--CCCEEEEEEETTTEEEEC
T ss_pred EEEEEEECCCEEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEE
T ss_conf 89999605759999978998788989889999889999899999569969999