BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780377|ref|YP_003064790.1| flagellar basal body P-ring
biosynthesis protein FlgA [Candidatus Liberibacter asiaticus str.
psy62]
(152 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|148360444|ref|YP_001251651.1| flagella basal body P-ring formation protein FlgA [Legionella
pneumophila str. Corby]
gi|296106491|ref|YP_003618191.1| flagella basal body P-ring formation protein FlgA [Legionella
pneumophila 2300/99 Alcoy]
gi|148282217|gb|ABQ56305.1| flagella basal body P-ring formation protein FlgA [Legionella
pneumophila str. Corby]
gi|295648392|gb|ADG24239.1| flagella basal body P-ring formation protein FlgA [Legionella
pneumophila 2300/99 Alcoy]
gi|307609702|emb|CBW99212.1| hypothetical protein LPW_09931 [Legionella pneumophila 130b]
Length = 233
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C+ ++LY+ ++F S +V + G ++ S + + ++ ++ Y
Sbjct: 87 IKCLEENNHWTLYIPVKITIFKS----VLVAKRALLKGTKISNSDIYQTELDVQKLKQGY 142
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
K+++GLV + + P+ + + ++ +G +V II N+T+S GIA+ +
Sbjct: 143 FTDSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGIAMDEG 202
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
++GD + VKN+ + ++ V TV+V+
Sbjct: 203 ALGDSVKVKNLSSKRIIEAQVTGKKTVKVI 232
>gi|52841143|ref|YP_094942.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|54296929|ref|YP_123298.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
pneumophila str. Paris]
gi|52628254|gb|AAU26995.1| flagella basal body P-ring formation protein FlgA [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|53750714|emb|CAH12121.1| hypothetical protein lpp0970 [Legionella pneumophila str. Paris]
Length = 233
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C+ ++LY+ ++F S +V + G ++ S + + ++ ++ Y
Sbjct: 87 IKCLEENNHWTLYIPVKITIFKS----VLVAKRALLKGTKISNSDIYQTELDVQKLKQGY 142
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
K+++GLV + + P+ + + ++ +G +V II N+T+S GIA+ +
Sbjct: 143 FTDSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGIAMDEG 202
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
++GD + VKN+ + ++ V TV+V
Sbjct: 203 ALGDSVKVKNLSSKRIIEAQVTGKKTVKV 231
>gi|54293884|ref|YP_126299.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
pneumophila str. Lens]
gi|53753716|emb|CAH15174.1| hypothetical protein lpl0940 [Legionella pneumophila str. Lens]
Length = 233
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C+ ++LY+ ++F S +V + G ++ S + + ++ ++ Y
Sbjct: 87 IKCLEENNHWTLYIPVKITIFKS----VLVAKRALLKGTKISNSDIYQTELDVQKLKQGY 142
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
K+++GLV + + P+ + + ++ +G +V II N+T+S G+A+ +
Sbjct: 143 FTDSKELIGLVCKHDITPNSPLNPFNIELAKLVHKGEQVSIIAAHDNLTVSMDGVAMDEG 202
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
++GD + VKN+ + ++ V TV+V
Sbjct: 203 ALGDSVKVKNLSSKRIIEAQVTGKKTVKV 231
>gi|146281765|ref|YP_001171918.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
stutzeri A1501]
gi|145569970|gb|ABP79076.1| flagella basal body P-ring formation protein FlgA [Pseudomonas
stutzeri A1501]
Length = 250
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 62/149 (41%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + +V + + L+E+ + + SN+ Y
Sbjct: 102 TVRVSCTGSSPWSVFVPAQVRLYRQVIVANRSLLRDSRLSEADVSLAERDVSNLTQGYLT 161
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ +V+G R + PD VI + + V+ +G +V I G + + G A++D +
Sbjct: 162 RMDEVLGNKLTRPVQPDQVIAPNQMELAEVVRKGDQVVITARSGAINVRMPGEAMADGAP 221
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G I VKN +G +V V+ G V V +
Sbjct: 222 GKQIPVKNQRSGRVVKARVIGPGHVEVAM 250
>gi|167034950|ref|YP_001670181.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
putida GB-1]
gi|166861438|gb|ABY99845.1| flagella basal body P-ring formation protein FlgA [Pseudomonas
putida GB-1]
Length = 250
Score = 126 bits (318), Expect = 6e-28, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 58/149 (38%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR + + VV + + + E + + + +
Sbjct: 102 TVRVRCDGAAPWTVFVPATVRLFRDVVVVTRPLKRDNTVGEGDVALRERDVGTLGQGFLT 161
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ VG+ R + D V+ L + V+ +G +V II G++++ G ALS +
Sbjct: 162 ELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSKGGL 221
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I V+N+++ +V V G V V +
Sbjct: 222 SEQIRVRNLNSKRVVKARVTGPGQVEVSM 250
>gi|148546700|ref|YP_001266802.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
putida F1]
gi|148510758|gb|ABQ77618.1| SAF domain protein [Pseudomonas putida F1]
Length = 250
Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 58/149 (38%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR + + VV + + + E + + + +
Sbjct: 102 TVRIRCNGAAPWTVFVPATVRLFRDVVVVTRPLKRDNTVGEGDVALRERDVGTLGQGFLT 161
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ VG+ R + D V+ L + V+ +G +V II G++++ G ALS +
Sbjct: 162 ELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSKGGL 221
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I V+N+++ +V V G V V +
Sbjct: 222 SEQIRVRNLNSKRVVKARVTGPGQVEVSM 250
>gi|292490649|ref|YP_003526088.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus
halophilus Nc4]
gi|291579244|gb|ADE13701.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus
halophilus Nc4]
Length = 221
Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ +++ G VV + + G L+ + + + +R Y V G
Sbjct: 84 WTVYLSVKVAVY----GKVVVATHPLVPGSPLSLADIHLERRNLEQLRQGYLRDPAQVAG 139
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R L VI VL P ++ RG +V +I + + G AL DA G+ I V+
Sbjct: 140 KRLKRPLGLGAVITPEVLEIPKLVRRGQQVILIAKVPGLQVHMKGQALEDAGAGEHIRVR 199
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N + +V G+V G V+V +
Sbjct: 200 NNSSQRIVEGTVTADGIVQVQM 221
>gi|77166141|ref|YP_344666.1| flageller protein FlgA [Nitrosococcus oceani ATCC 19707]
gi|254435735|ref|ZP_05049242.1| SAF domain family [Nitrosococcus oceani AFC27]
gi|76884455|gb|ABA59136.1| flagellar protein FlgA [Nitrosococcus oceani ATCC 19707]
gi|207088846|gb|EDZ66118.1| SAF domain family [Nitrosococcus oceani AFC27]
Length = 235
Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ +++ G +V + I++G L+ L+ + S +R Y + VG
Sbjct: 98 WTVYLSVKMAVY----GKVLVATHSISSGFPLSLVDLRLERRDLSELRQGYLNEPAQAVG 153
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + +I +L P +I RG +V ++ T + ++ G AL DA G+ I V+
Sbjct: 154 KRLKRPVGLGAIITPGMLEIPKLIRRGQQVILMATAPGLQVNMKGQALEDAGAGEHIRVR 213
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N + +V G+V G V+V +
Sbjct: 214 NTSSRRIVEGTVTAAGLVQVQM 235
>gi|313497755|gb|ADR59121.1| FlgA [Pseudomonas putida BIRD-1]
Length = 240
Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 58/149 (38%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR + + VV + + + E + + + +
Sbjct: 92 TVRIRCNGAAPWTVFVPATVRLFRDVVVVTRPLKRDNTVGEGDVALRERDVGTLGQGFLT 151
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ VG+ R + D V+ L + V+ +G +V II G++++ G ALS +
Sbjct: 152 ELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSKGGL 211
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I V+N+++ +V V G V V +
Sbjct: 212 SEQIRVRNLNSKRVVKARVTGPGQVEVSM 240
>gi|170722898|ref|YP_001750586.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
putida W619]
gi|169760901|gb|ACA74217.1| flagella basal body P-ring formation protein FlgA [Pseudomonas
putida W619]
Length = 250
Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 57/149 (38%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR + + VV + + ++ E + + + +
Sbjct: 102 TVRVRCNGAAPWTVFVPATVRLFRDVVVVTRPLKRQNIVAEGDVALRERDVGTLTQGFLT 161
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ VG+ R + D V+ L + VI +G V II G++ + G ALS
Sbjct: 162 DLDQAVGMKMLRPTVIDQVLTPQHLEQAEVIRKGDHVVIIARSGSLAVRMPGEALSKGGQ 221
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+ I V+N+++ +V V G V V +
Sbjct: 222 GEQIRVRNLNSQRVVKARVTAPGQVEVAM 250
>gi|327480014|gb|AEA83324.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
stutzeri DSM 4166]
Length = 215
Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 61/149 (40%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + +V + + VL+++ + + S + Y
Sbjct: 67 TVRVSCEGSSPWSVFVPAQVRLYREVIVANRSLLRDTVLSQADVSLAERDVSALNQGYLT 126
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ + +G R + PD VI + L V+ +G +V I G++++ G A++D +
Sbjct: 127 RMDEALGNKLTRPVQPDQVITPNQLEMAKVVRKGDQVVITAKTGSISVRMPGEAMADGAP 186
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G I VKN +G + V G V V +
Sbjct: 187 GKQIPVKNQRSGRTIKARVTGPGRVEVAM 215
>gi|325274808|ref|ZP_08140835.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
sp. TJI-51]
gi|324100053|gb|EGB97872.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
sp. TJI-51]
Length = 240
Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 59/149 (39%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR + + VV + + V+ E + + + +
Sbjct: 92 TVRVRCNGAAPWTVFVPATVRLFRDVVVVTRPLKRDNVVGEGDVALRERDVGTLGQGFLS 151
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ VG+ R + D V+ L + V+ +G +V I+ G++++ G ALS +
Sbjct: 152 ELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIVARSGSLSVRMPGEALSKGGL 211
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I V+N+++ +V V G V V +
Sbjct: 212 SEQIRVRNLNSKRVVKARVTGPGQVEVSM 240
>gi|126668330|ref|ZP_01739289.1| flagellar basal body P-ring biosynthesis protein [Marinobacter sp.
ELB17]
gi|126627247|gb|EAZ97885.1| flagellar basal body P-ring biosynthesis protein [Marinobacter sp.
ELB17]
Length = 263
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +Y+ + + G A+V S + GE L + V + R + ++G
Sbjct: 126 WRMYLSATV----DIHGPALVASRPLARGERLRADMVSLQTVVVNASRRGTIAEAQSIIG 181
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ RR + +I +L P + RG V I + G+ T+S+ G AL++A+IG+ + V+
Sbjct: 182 MEVRRPINSGSLITPDLLAAPDAVERGDHVMITASSGSFTVSSRGKALANAAIGEQVLVE 241
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N+ + + G V G V++ +
Sbjct: 242 NLQSSRTIKGRVTAPGQVQIPM 263
>gi|146307875|ref|YP_001188340.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
mendocina ymp]
gi|145576076|gb|ABP85608.1| SAF domain protein [Pseudomonas mendocina ymp]
Length = 252
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 55/149 (36%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
R S + V + + V+ S L ++ + Y
Sbjct: 104 TTRVRCNGSAPWTVFVPAEVRLYRQVAVLTRPLKRLSVVKASDLSMVERDVGQLAQGYLT 163
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+G R L D +I + L VI RG +V I + G + + G AL+D +
Sbjct: 164 DPTQAIGKKLTRQLNSDQIITPAHLQVAEVIRRGDQVVISASGGTVNVRMPGEALTDGAP 223
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G I V+N+ + ++ VV G V V +
Sbjct: 224 GQQINVRNLRSQRVIRARVVGPGQVEVAM 252
>gi|104782850|ref|YP_609348.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
entomophila L48]
gi|95111837|emb|CAK16561.1| flagella basal body P-ring formation protein FlgA [Pseudomonas
entomophila L48]
Length = 249
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 60/149 (40%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
V+ + ++ VV + + V+++ + + + Y
Sbjct: 101 TVKVRCDGTAPWTVFVPTQVRLLREVVVMTRPLKRESVIDQGDVALRERDVGTLTQGYLT 160
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
++ VG+ R + D V+ + + VI +G +V I+ G++++ G AL +
Sbjct: 161 QLEQAVGMKLVRPTVLDQVLTQQHMEQADVIRKGDQVVIVARSGSLSVRMPGEALDKGGM 220
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
I V+N+++ +V V G V V +
Sbjct: 221 EAQIRVRNLNSKRVVKARVTGPGQVEVAM 249
>gi|218778845|ref|YP_002430163.1| flagella basal body P-ring formation protein FlgA
[Desulfatibacillum alkenivorans AK-01]
gi|218760229|gb|ACL02695.1| Flagella basal body P-ring formation protein FlgA
[Desulfatibacillum alkenivorans AK-01]
Length = 324
Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 58/144 (40%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ ++ + + VV + ++ +VL + S + K+
Sbjct: 180 SVDGNMERRVSIAAWVDYEAPVVVATRKLDRMDVLTAGDVTVEMRNLSRLPDGVVTDPKE 239
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
V G+ R+ + + +L +P ++ RG V I+ G ++I+ G+A +GD I
Sbjct: 240 VRGMRLRQDMDAGEHMLSRMLEKPPLVERGEDVTIMAENGVLSITAIGLAKESGGLGDAI 299
Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150
V+N + +++ V V V
Sbjct: 300 EVENKMSEKIITCRVTGPAQVEVR 323
>gi|121997325|ref|YP_001002112.1| SAF domain-containing protein [Halorhodospira halophila SL1]
gi|121588730|gb|ABM61310.1| SAF domain [Halorhodospira halophila SL1]
Length = 262
Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++YV +L VV + + G+ ++ L+ IRG + ++G
Sbjct: 124 WTVYVRMETTL----KTEMVVATRNLRRGQRVSAGDLRTATRDARRIRGEFYRDPAPLIG 179
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN-MTISTAGIALSDASIGDVIAV 128
RR L I + + P ++ R +V I G + IS+ G AL G+ I V
Sbjct: 180 QAVRRSLREGAAITGNHVQPPRLVERNDRVTITAGNGGAIQISSRGRALEHGQEGERIRV 239
Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
+N+D+G + VV G VRV
Sbjct: 240 ENLDSGREIQARVVGEGQVRV 260
>gi|26991083|ref|NP_746508.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
putida KT2440]
gi|24986118|gb|AAN69972.1|AE016635_8 flagella basal body P-ring formation protein FlgA [Pseudomonas
putida KT2440]
Length = 225
Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 58/149 (38%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR + + VV + + + E + + + +
Sbjct: 77 TVRIRCNGAAPWTVFVPATVRLFRDVVVVTRPLKRDNTVGEGDVALRERDVGTLGQGFLT 136
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ VG+ R + D V+ L + V+ +G +V II G++++ G ALS +
Sbjct: 137 ELDQAVGMKMLRPTVIDQVLTPQHLEQAEVVRKGDQVVIIARSGSLSVRMPGEALSKGGL 196
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I V+N+++ +V V G V V +
Sbjct: 197 SEQIRVRNLNSKRVVKARVTGPGQVEVSM 225
>gi|300113144|ref|YP_003759719.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus
watsonii C-113]
gi|299539081|gb|ADJ27398.1| flagella basal body P-ring formation protein FlgA [Nitrosococcus
watsonii C-113]
Length = 235
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ +++ G +V + I++G LN + ++ + S +R Y + VG
Sbjct: 98 WTVYLSVKMAVY----GKVLVATHSISSGFPLNLADMRLERRDLSELRQGYLNEPAQAVG 153
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + +I +L P +I RG +V ++ + ++ G AL DA G+ I V+
Sbjct: 154 KRLKRPVGLGAIITPGMLETPKLIRRGQQVILMAKVPGLRVNMKGQALEDAGAGEHIRVR 213
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N + +V G+V G V+V +
Sbjct: 214 NTSSQRIVEGTVTAAGLVQVQM 235
>gi|288940403|ref|YP_003442643.1| flagella basal body P-ring formation protein FlgA [Allochromatium
vinosum DSM 180]
gi|288895775|gb|ADC61611.1| flagella basal body P-ring formation protein FlgA [Allochromatium
vinosum DSM 180]
Length = 245
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ +SL+V + VV I+ +V+ ++ + S + Y D
Sbjct: 105 PVSWSLFVPARI----ERHLPVVVLERPISRQQVIGPDDIRIERQAVSTLTNGYFTEASD 160
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
VVGL +RR L+P V+ + + + ++ RG +V + + + + G AL + G+ I
Sbjct: 161 VVGLASRRRLMPGQVLTSAHVTQRRIVERGQEVTLFSARPGLVVRMKGTALENGVEGERI 220
Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151
V+N + +V G V +G VRV +
Sbjct: 221 RVRNTSSKRIVEGYVEPSGAVRVAL 245
>gi|311694437|gb|ADP97310.1| flagella basal body P-ring formation protein FlgA [marine bacterium
HP15]
Length = 222
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 66/149 (44%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
++ + + S+ G A+V + + GE + E L + V ++ R
Sbjct: 74 SLQVACEGTRPWRMFVTASVSIHGPALVAARPLTRGERITEGLLAKQSVEINSSRRGVIT 133
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
K +G+ RR + ++ +L P + RG V I G ++ + G AL+ AS+
Sbjct: 134 DSKQAIGMEVRRAVNAGSLVTPDMLSAPNAVERGDHVIITAKTGGFSVRSRGKALASASV 193
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+ + V+N+ + + SVV G V + +
Sbjct: 194 GEQVLVENLRSSRTIRASVVAPGHVEIPM 222
>gi|70731829|ref|YP_261571.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
fluorescens Pf-5]
gi|68346128|gb|AAY93734.1| flagellar basal-body P-ring formation protein FlgA, putative
[Pseudomonas fluorescens Pf-5]
Length = 253
Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++++V + LF V + + ++ + + S Y S+ +G
Sbjct: 116 WTVFVPAQVKLF----REVVTTARPLKRAGIIEPEDVVLRERDISQNNQGYLTSVDQAIG 171
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R ++ D ++ L+ L + V+ +G +V I G + + G ALS+ + + I VK
Sbjct: 172 QKLVRPMVADQLVTLAHLEQAEVVRKGDQVVISARSGTLNVRMPGEALSNGGMSEQIRVK 231
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N+++ ++ + G V V +
Sbjct: 232 NLNSQRVIKARITAPGQVEVAM 253
>gi|296135677|ref|YP_003642919.1| flagella basal body P-ring formation protein FlgA [Thiomonas
intermedia K12]
gi|295795799|gb|ADG30589.1| flagella basal body P-ring formation protein FlgA [Thiomonas
intermedia K12]
Length = 242
Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+SLY+ VV + + AG VL + L ++ + + + +VG
Sbjct: 104 WSLYLPVRV----DRPQGVVVVARALQAGHVLTAADLTTVERDAARLPPGAVTDAQALVG 159
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
V R + + S+L P ++ G V +I + + G A++D +G + V+
Sbjct: 160 QVLRYSVAAGQPLVQSMLTGPQLVHYGQSVSLIAQGMGVRLVALGQAMADGRVGQSVLVR 219
Query: 130 NIDTGVMVSGSVVDTGTVRVVVK 152
N+ +G +VSG V G V V ++
Sbjct: 220 NVQSGRVVSGIVDTQGQVVVPLQ 242
>gi|330502728|ref|YP_004379597.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
mendocina NK-01]
gi|328917014|gb|AEB57845.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
mendocina NK-01]
Length = 234
Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 56/149 (37%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
R S + VV + + V+ S L M+ + N+
Sbjct: 86 TTRVRCDGSAPWTVFVPAEIRLYRPVVVLTRPLKRMSVVKASDLSMMERDVGPLGQNFLT 145
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+G R L D V+ S L VI RG +V I + + G AL+D +
Sbjct: 146 DPTQAIGKKLTRQLGGDQVLAPSHLQIAEVIRRGDQVVISARGTTVNVRMPGEALTDGAP 205
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+ I V+N+ + +V VV G V V +
Sbjct: 206 GEQINVRNLRSQRVVRARVVGPGQVEVAM 234
>gi|74101654|gb|AAZ99744.1| FlgAL [Aeromonas hydrophila]
Length = 270
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 59/138 (42%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ +++ V + I G+ + L E + S ++ + S + +VG +
Sbjct: 132 AWQLRARVEVTLMLPVWVTAQEIQKGQTIRTGDLVEKSLDISRLQRGFVPSSESLVGSKS 191
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
R L +I L + + I G V I + +T G AL++ +IGD I V+NI
Sbjct: 192 NRNLRMGQLIGELDLQKAWAIREGEGVLIRAGLDGFSATTRGKALANGAIGDGIKVRNIS 251
Query: 133 TGVMVSGSVVDTGTVRVV 150
+G + V++ G V
Sbjct: 252 SGKEIQAWVIEKGEVETR 269
>gi|220934388|ref|YP_002513287.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Thioalkalivibrio sp. HL-EbGR7]
gi|219995698|gb|ACL72300.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Thioalkalivibrio sp. HL-EbGR7]
Length = 262
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C+ + +SLYV ++ G VV + G L L+ + + G Y
Sbjct: 117 IRCL-GPVTWSLYVPVHVAVH----GEVVVLGHPLPRGMQLEAQHLRLERHDVGALPGGY 171
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ ++ +V RR L V+ ++ P ++ RG +V ++ + + G AL+D
Sbjct: 172 LNDLELARDMVLRRALPAGTVLTPQMVEPPRLVRRGQRVTLLAEGSAVNVRVEGEALADG 231
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
S G+ + V+N+ + +V G V+ G V V +
Sbjct: 232 SRGERVQVRNLSSRRVVEGVVLSHGVVGVRM 262
>gi|145297451|ref|YP_001140292.1| lateral flagellar basal body P-ring biosynthesis protein, LfgA
[Aeromonas salmonicida subsp. salmonicida A449]
gi|142850223|gb|ABO88544.1| lateral flagellar basal body P-ring biosynthesis protein, LfgA
[Aeromonas salmonicida subsp. salmonicida A449]
Length = 226
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 59/138 (42%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ +++ V + I G+ + L E + S ++ + S + +VG +
Sbjct: 88 AWQLRARVEVTLMLPVWVTAQEIQKGQAIRAGDLVEKSLDISRLQRGFVPSSESLVGSKS 147
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
R L +I L + + + G V I + +T G AL++ +IGD I V+NI
Sbjct: 148 TRNLRMGQLIGELDLQKAWAVREGEGVLIRAGLDGFSATTRGKALANGAIGDGIKVRNIS 207
Query: 133 TGVMVSGSVVDTGTVRVV 150
+G + V+D G V
Sbjct: 208 SGKEIQAWVIDKGEVETR 225
>gi|289208108|ref|YP_003460174.1| flagella basal body P-ring formation protein FlgA [Thioalkalivibrio
sp. K90mix]
gi|288943739|gb|ADC71438.1| flagella basal body P-ring formation protein FlgA [Thioalkalivibrio
sp. K90mix]
Length = 244
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ +S+YV +V S + + L+ ++ S G+Y S +
Sbjct: 104 PVSWSIYVPVTV----ERYAEVLVASRTLRRQHTILPGDLRTKRIQTSRHAGSYFESKNE 159
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
+VGL TRR + ++ + + V+SRG +V I+ G++ I G AL + +GD I
Sbjct: 160 LVGLQTRRNIRSGQILGQQHVTQREVVSRGQRVTILAENGSVVIRMQGEALENGILGDRI 219
Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151
VKN +G +V G V+++G VRV
Sbjct: 220 RVKNSSSGRVVEGEVLESGHVRVAP 244
>gi|145597813|ref|YP_001161889.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis Pestoides F]
gi|145209509|gb|ABP38916.1| flagella basal body P-ring formation protein [Yersinia pestis
Pestoides F]
Length = 305
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 62/132 (46%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
++ + V + G + ++ + + ++G Y +++GL +R +
Sbjct: 169 TVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRRIRQ 228
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ S L +P +++R V ++ Q + GIA + G++I VKN+ +G +V+
Sbjct: 229 LQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVT 288
Query: 139 GSVVDTGTVRVV 150
+V +G VR++
Sbjct: 289 ATVDGSGRVRML 300
>gi|108809059|ref|YP_652975.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis Antiqua]
gi|108810744|ref|YP_646511.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis Nepal516]
gi|167398491|ref|ZP_02304015.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|21960413|gb|AAM87006.1|AE013948_14 putative flagellar protein [Yersinia pestis KIM 10]
gi|45437658|gb|AAS63208.1| putative flagellar protein [Yersinia pestis biovar Microtus str.
91001]
gi|108774392|gb|ABG16911.1| flagella basal body P-ring formation protein [Yersinia pestis
Nepal516]
gi|108780972|gb|ABG15030.1| putative flagella basal body P-ring formation protein [Yersinia
pestis Antiqua]
gi|167050995|gb|EDR62403.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Antiqua str. UG05-0454]
Length = 305
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 62/132 (46%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
++ + V + G + ++ + + ++G Y +++GL +R +
Sbjct: 169 TVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRRIRQ 228
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ S L +P +++R V ++ Q + GIA + G++I VKN+ +G +V+
Sbjct: 229 LQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVT 288
Query: 139 GSVVDTGTVRVV 150
+V +G VR++
Sbjct: 289 ATVDGSGRVRML 300
>gi|163750576|ref|ZP_02157814.1| flagellar basal body P-ring biosynthesis protein [Shewanella
benthica KT99]
gi|161329731|gb|EDQ00720.1| flagellar basal body P-ring biosynthesis protein [Shewanella
benthica KT99]
Length = 234
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ + + +++ ++ VV + G+++ + + V + +RG
Sbjct: 92 NSPQLQYPWQIFISVRV----DILYPVVVARATLGPGDLITKGDIVIKYVEQTLLRGRQF 147
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
++ +VVG +R + P+ I + L + +G V II N I T G AL D +
Sbjct: 148 SNLDEVVGTRAKRRIAPNQPIFSNNL---CFVCKGDSVSIIARTENFQIKTVGEALQDGN 204
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+GD I +KN + V+ V+D G V V +
Sbjct: 205 LGDRIRIKNTYSNKRVNARVIDVGKVEVRM 234
>gi|312962594|ref|ZP_07777084.1| flagellar basal-body P-ring formation protein FlgA [Pseudomonas
fluorescens WH6]
gi|311283174|gb|EFQ61765.1| flagellar basal-body P-ring formation protein FlgA [Pseudomonas
fluorescens WH6]
Length = 254
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 60/149 (40%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR + + VV + + ++ + + S I Y
Sbjct: 106 TVRVRCDGASPWTVFVPAQVKLYRDVVVVARPLKRTSIIGFEDVVLRERDISQINQGYLT 165
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ +G R ++ D VI L L + VI +G +V I + G + + G ALS+ +
Sbjct: 166 SLDQALGQKLTRPVVTDQVITLVHLEQAEVIRKGDQVVISASSGTLNVKMPGEALSNGGM 225
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ V G V V +
Sbjct: 226 SEQIRVKNLNSNRVIKARVTAPGQVEVAL 254
>gi|294339847|emb|CAZ88210.1| putative Flagella basal body P-ring formation protein flgA
[Thiomonas sp. 3As]
Length = 244
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+SLY+ VV + + AG VL + L ++ + + + +VG
Sbjct: 106 WSLYLPVRV----DRPQGVVVVARALQAGHVLTAADLTMVERDATRLPPGAVTDAQALVG 161
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
V R + + S+L P ++ G V +I + + G A++D +G + V+
Sbjct: 162 QVLRYSVAAGQPLAQSMLTGPQLVHYGQSVSLIAQGMGVRLVALGQAMADGRVGQSVLVR 221
Query: 130 NIDTGVMVSGSVVDTGTVRVVVK 152
N+ +G +VSG V G V V ++
Sbjct: 222 NVQSGRVVSGIVDAQGQVVVPLQ 244
>gi|192358836|ref|YP_001982407.1| putative flagella basal body P-ring formation protein FlgA
[Cellvibrio japonicus Ueda107]
gi|190685001|gb|ACE82679.1| putative flagella basal body P-ring formation protein FlgA
[Cellvibrio japonicus Ueda107]
Length = 256
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++L++ + S+F S+ V + GE ++ S ++ + S +R +Y K+++G
Sbjct: 120 WTLHIPAQVSVFRSI----PVAMRDLARGEQISASDIQWETINISLLRQSYLLETKEIIG 175
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
L +R + + L P VI RG V + + G + +S +G AL+D +G I V+
Sbjct: 176 LEVKRNIGLGSPFLSASLDAPKVIYRGETVDLESSVGGINVSASGTALADGRLGQKIRVR 235
Query: 130 NIDTGVMVSGSVVDTGTVR 148
N + +V+G+VV +G V
Sbjct: 236 NNQSDRVVTGTVVASGKVS 254
>gi|254780377|ref|YP_003064790.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040054|gb|ACT56850.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus
Liberibacter asiaticus str. psy62]
Length = 152
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY
Sbjct: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA
Sbjct: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK
Sbjct: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
>gi|153950687|ref|YP_001399630.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pseudotuberculosis IP 31758]
gi|152962182|gb|ABS49643.1| flagella basal body P-ring formation protein FlgA [Yersinia
pseudotuberculosis IP 31758]
Length = 272
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 62/132 (46%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
++ + V + G + ++ + + ++G Y +++GL +R +
Sbjct: 136 TVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRRIRQ 195
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ S L +P +++R V ++ Q + GIA + G++I VKN+ +G +V+
Sbjct: 196 LQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVT 255
Query: 139 GSVVDTGTVRVV 150
+V +G VR++
Sbjct: 256 ATVDGSGRVRML 267
>gi|150260253|ref|ZP_01916981.1| lateral flagellar P-ring addition protein [Yersinia pestis
CA88-4125]
gi|162419782|ref|YP_001604851.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis Angola]
gi|165925092|ref|ZP_02220924.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165939099|ref|ZP_02227651.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. IP275]
gi|166008979|ref|ZP_02229877.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166211927|ref|ZP_02237962.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167418801|ref|ZP_02310554.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167425137|ref|ZP_02316890.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|167466345|ref|ZP_02331049.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis FV-1]
gi|229837404|ref|ZP_04457567.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
Pestoides A]
gi|229840617|ref|ZP_04460776.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229842832|ref|ZP_04462984.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
biovar Orientalis str. India 195]
gi|229900941|ref|ZP_04516065.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
Nepal516]
gi|294502784|ref|YP_003566846.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
Z176003]
gi|149289661|gb|EDM39738.1| lateral flagellar P-ring addition protein [Yersinia pestis
CA88-4125]
gi|162352597|gb|ABX86545.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
Angola]
gi|165913055|gb|EDR31680.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. IP275]
gi|165923292|gb|EDR40443.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165992318|gb|EDR44619.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166206673|gb|EDR51153.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166962795|gb|EDR58816.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167055900|gb|EDR65681.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|229682280|gb|EEO78372.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
Nepal516]
gi|229690099|gb|EEO82156.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
biovar Orientalis str. India 195]
gi|229696983|gb|EEO87030.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229705527|gb|EEO91537.1| flagellar basal-body P-ring formation protein flgA [Yersinia pestis
Pestoides A]
gi|262360816|gb|ACY57537.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
D106004]
gi|262364761|gb|ACY61318.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
D182038]
gi|294353243|gb|ADE63584.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
Z176003]
gi|320016715|gb|ADW00287.1| Flagellar basal-body P-ring formation proteinflgA [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 282
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 62/132 (46%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
++ + V + G + ++ + + ++G Y +++GL +R +
Sbjct: 146 TVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRRIRQ 205
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ S L +P +++R V ++ Q + GIA + G++I VKN+ +G +V+
Sbjct: 206 LQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVT 265
Query: 139 GSVVDTGTVRVV 150
+V +G VR++
Sbjct: 266 ATVDGSGRVRML 277
>gi|152985501|ref|YP_001347163.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
aeruginosa PA7]
gi|150960659|gb|ABR82684.1| hypothetical protein PSPA7_1780 [Pseudomonas aeruginosa PA7]
Length = 232
Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++++ + LF VV + VL+++ + ++ + Y VVG
Sbjct: 95 WTIFMPAQVKLF----RQVVVAVQPLKREHVLDDADIALVERDVGLLTQGYLTDPARVVG 150
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
RR ++ D V+ + L + + +G +V I+ + + G AL+D + G I V+
Sbjct: 151 QKLRRPVINDQVLAPAFLEQAEAVRKGDQVVILARTATINVKMPGEALADGAPGQQIRVR 210
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N+ + ++ V++ GTV V +
Sbjct: 211 NLRSQRVIKARVLEPGTVEVNM 232
>gi|170022967|ref|YP_001719472.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pseudotuberculosis YPIII]
gi|186896775|ref|YP_001873887.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pseudotuberculosis PB1/+]
gi|51590923|emb|CAH22579.1| Putative flagella basal body P-ring formation protein [Yersinia
pseudotuberculosis IP 32953]
gi|169749501|gb|ACA67019.1| flagella basal body P-ring formation protein FlgA [Yersinia
pseudotuberculosis YPIII]
gi|186699801|gb|ACC90430.1| flagella basal body P-ring formation protein FlgA [Yersinia
pseudotuberculosis PB1/+]
Length = 272
Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 62/132 (46%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
++ + V + G + ++ + + ++G Y +++GL +R +
Sbjct: 136 TVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRRIRQ 195
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ S L +P +++R V ++ Q + GIA + G++I VKN+ +G +V+
Sbjct: 196 LQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVT 255
Query: 139 GSVVDTGTVRVV 150
+V +G VR++
Sbjct: 256 ATVDGSGRVRML 267
>gi|49082058|gb|AAT50429.1| PA3350 [synthetic construct]
Length = 233
Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 60/149 (40%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + VV + VL ++ + ++ + Y
Sbjct: 84 TVRISCEGSAPWTIFMPAQVKLFRQVVVAVQPLKRAHVLEDADIALVERDVGLLTQGYLT 143
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
VVG RR ++ D V+ L + + +G +V I+ + + G ALSD +
Sbjct: 144 DPARVVGQKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAP 203
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G I V+N+ + ++ V++ GTV V +
Sbjct: 204 GQQIRVRNLRSQRIIKARVIEPGTVEVNM 232
>gi|15598546|ref|NP_252040.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
aeruginosa PAO1]
gi|218890454|ref|YP_002439318.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
aeruginosa LESB58]
gi|254236312|ref|ZP_04929635.1| hypothetical protein PACG_02283 [Pseudomonas aeruginosa C3719]
gi|254242037|ref|ZP_04935359.1| hypothetical protein PA2G_02763 [Pseudomonas aeruginosa 2192]
gi|9949483|gb|AAG06738.1|AE004757_7 hypothetical protein PA3350 [Pseudomonas aeruginosa PAO1]
gi|126168243|gb|EAZ53754.1| hypothetical protein PACG_02283 [Pseudomonas aeruginosa C3719]
gi|126195415|gb|EAZ59478.1| hypothetical protein PA2G_02763 [Pseudomonas aeruginosa 2192]
gi|218770677|emb|CAW26442.1| putative flagella basal body P-ring formation protein [Pseudomonas
aeruginosa LESB58]
Length = 232
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 60/149 (40%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + VV + VL ++ + ++ + Y
Sbjct: 84 TVRISCEGSAPWTIFMPAQVKLFRQVVVAVQPLKRAHVLEDADIALVERDVGLLTQGYLT 143
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
VVG RR ++ D V+ L + + +G +V I+ + + G ALSD +
Sbjct: 144 DPARVVGQKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAP 203
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G I V+N+ + ++ V++ GTV V +
Sbjct: 204 GQQIRVRNLRSQRIIKARVIEPGTVEVNM 232
>gi|108807169|ref|YP_651085.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis Antiqua]
gi|108812487|ref|YP_648254.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis Nepal516]
gi|145598614|ref|YP_001162690.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis Pestoides F]
gi|108776135|gb|ABG18654.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
Nepal516]
gi|108779082|gb|ABG13140.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
Antiqua]
gi|145210310|gb|ABP39717.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
Pestoides F]
Length = 251
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ V G V + AGE ++ ++ Q + G V++
Sbjct: 115 LRRFIQTQVQVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQ 174
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R +++ G V ++ +++ G A+++ + + I V+ + +
Sbjct: 175 RQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPS 233
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG+V D GT+R+++
Sbjct: 234 GQIVSGTVADDGTIRIML 251
>gi|186895110|ref|YP_001872222.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pseudotuberculosis PB1/+]
gi|186698136|gb|ACC88765.1| flagella basal body P-ring formation protein FlgA [Yersinia
pseudotuberculosis PB1/+]
Length = 259
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ V G V + AGE ++ ++ Q + G V++
Sbjct: 123 LRRFIQTQVQVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQ 182
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R +++ G V ++ +++ G A+++ + + I V+ + +
Sbjct: 183 RQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPS 241
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG+V D GT+R+++
Sbjct: 242 GQIVSGTVADDGTIRIML 259
>gi|107102882|ref|ZP_01366800.1| hypothetical protein PaerPA_01003950 [Pseudomonas aeruginosa PACS2]
Length = 232
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++++ + LF VV + VL ++ + ++ + Y VVG
Sbjct: 95 WTIFMPAQVKLF----RQVVVAVQPLKRAHVLEDADIALVERDVGLLTQGYLTDPARVVG 150
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
RR ++ D V+ L + + +G +V I+ + + G ALSD + G I V+
Sbjct: 151 QKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQIRVR 210
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N+ + ++ V++ GTV V +
Sbjct: 211 NLRSQRIIKARVIEPGTVEVNM 232
>gi|254497119|ref|ZP_05109939.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
drancourtii LLAP12]
gi|254353657|gb|EET12372.1| flagellar basal body P-ring biosynthesis protein FlgA [Legionella
drancourtii LLAP12]
Length = 246
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+SLYV + ++ + + GE ++ + + ++ ++ Y I ++VG
Sbjct: 109 WSLYVPIRVT----ILKTVYIARRALMKGEHISGHDMYQAEIDVHKLKNGYFEDIDELVG 164
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
V ++ + + + P V+ +G KV I+ N+T+S GIA++D ++G+ I VK
Sbjct: 165 RVCKQNIAINSPFNPHNIELPKVVRKGEKVAIVTNNNNLTVSMDGIAINDGAMGETIKVK 224
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N+ + ++ V V VV
Sbjct: 225 NLVSKRIIEAQVAGKKRVTVV 245
>gi|294140178|ref|YP_003556156.1| flagellar basal-body P-ring formation protein FlgA [Shewanella
violacea DSS12]
gi|293326647|dbj|BAJ01378.1| flagellar basal-body P-ring formation protein FlgA, putative
[Shewanella violacea DSS12]
Length = 234
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ + +++ ++ VV + G+++ + + V + +RG
Sbjct: 92 KSPQLDYPWQIFISVRV----DILYPVVVARQTLGPGDLIAKGDIVIKYVEQTLLRGQQF 147
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+++ +VVG +R + I + L + +G V I N I T G AL D +
Sbjct: 148 NNLAEVVGTRVKRRTPANQPIFSNNL---CFVCKGDSVSIFARTDNFEIKTVGEALQDGN 204
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+GD I +KN + V V+D G V V +
Sbjct: 205 LGDRIRIKNTYSHKTVDARVIDVGKVEVRM 234
>gi|308273545|emb|CBX30147.1| hypothetical protein N47_D29560 [uncultured Desulfobacterium sp.]
Length = 251
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 57/134 (42%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
S + V V S +N G+V+ + + S + + + +G + +
Sbjct: 116 VKLSGWVDVFDSVVCASHNLNRGDVITAGDIHLERKNISRLNSDTLKDVDQAIGFMAKHD 175
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
+ + + +L + ++++G V I+ G++ I+ G L +GD I V+N +
Sbjct: 176 IKDNDCLKEWMLKKTPLVNKGDMVTILAEHGSIRITAPGRILEKGYMGDYIKVQNTMSKK 235
Query: 136 MVSGSVVDTGTVRV 149
V +V+ TV V
Sbjct: 236 SVYAKIVNDSTVVV 249
>gi|22126394|ref|NP_669817.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis KIM 10]
gi|45441413|ref|NP_992952.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis biovar Microtus str. 91001]
gi|162419453|ref|YP_001606469.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis Angola]
gi|165926043|ref|ZP_02221875.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165938691|ref|ZP_02227246.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. IP275]
gi|166010841|ref|ZP_02231739.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166210809|ref|ZP_02236844.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167401018|ref|ZP_02306521.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167420243|ref|ZP_02311996.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167425844|ref|ZP_02317597.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|167469716|ref|ZP_02334420.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
FV-1]
gi|270486649|ref|ZP_06203723.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
KIM D27]
gi|294504034|ref|YP_003568096.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis
Z176003]
gi|21959381|gb|AAM86068.1|AE013854_4 putative flagella basal body P-ring formation protein [Yersinia
pestis KIM 10]
gi|45436274|gb|AAS61829.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Microtus str. 91001]
gi|162352268|gb|ABX86216.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
Angola]
gi|165913305|gb|EDR31927.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. IP275]
gi|165922247|gb|EDR39424.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165990185|gb|EDR42486.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166207989|gb|EDR52469.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166961938|gb|EDR57959.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167049407|gb|EDR60815.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167055243|gb|EDR65040.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|262361780|gb|ACY58501.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis
D106004]
gi|262366084|gb|ACY62641.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis
D182038]
gi|270335153|gb|EFA45930.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
KIM D27]
gi|294354493|gb|ADE64834.1| flagellar basal body P-ring biosynthesis protein [Yersinia pestis
Z176003]
Length = 254
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ V G V + AGE ++ ++ Q + G V++
Sbjct: 118 LRRFIQTQVQVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQ 177
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R +++ G V ++ +++ G A+++ + + I V+ + +
Sbjct: 178 RQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPS 236
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG+V D GT+R+++
Sbjct: 237 GQIVSGTVADDGTIRIML 254
>gi|327478805|gb|AEA82115.1| SAF domain-containing protein [Pseudomonas stutzeri DSM 4166]
Length = 267
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 64/131 (48%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ SV AV +I G+ L L+ + + Y H +++V G+ +R +
Sbjct: 134 VTSQPSVWLPAVHAQGIIERGQTLGRDDLRLEPINIGKAQRGYFHRLEEVQGMAAKRRIR 193
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ S+L +P + RG V+I+ + + ST G AL+D G+VI V+N+ +G ++
Sbjct: 194 AGQTLTPSLLAQPLAVRRGQPVKIVASHDGIEASTNGEALADGQPGEVIRVRNVRSGKVI 253
Query: 138 SGSVVDTGTVR 148
VV+ G V
Sbjct: 254 DAKVVEEGVVT 264
>gi|254785365|ref|YP_003072794.1| flagella basal body P-ring formation protein FlgA [Teredinibacter
turnerae T7901]
gi|237683904|gb|ACR11168.1| flagella basal body P-ring formation protein FlgA [Teredinibacter
turnerae T7901]
Length = 228
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 62/147 (42%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
V+ + + V+ + I G + + ++ S++ G Y
Sbjct: 79 SVKTRCTGTARWTIYVPVQVETFEEVVIAAGAIGRGAQITAGDVVTQRMNTSHLTGGYLR 138
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
VVGL RR+L P +I L+ + P V+ +G V + + + T AL++ +
Sbjct: 139 DPARVVGLEARRMLRPGEIIKLNQVKAPDVVKKGQTVVLEARSSALRVVTEATALTNGGV 198
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G+ I V+N + +V V GTVRV
Sbjct: 199 GEQIKVRNNRSQRIVDAQVTGPGTVRV 225
>gi|255609741|ref|XP_002539089.1| Flagella basal body P-ring formation protein flgA precursor,
putative [Ricinus communis]
gi|223508772|gb|EEF23295.1| Flagella basal body P-ring formation protein flgA precursor,
putative [Ricinus communis]
Length = 163
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
R +S+YV + V G+AVV + I G+ + + L+ + +
Sbjct: 22 RAPSSWSIYVPVMI----RVSGNAVVATHPIARGQAITQDDLELQTRDLTQYPNGTFSNP 77
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
+ ++G + V+ L VI +G +V ++ +S+ G A+ +A+ G
Sbjct: 78 EQIIGRTATLNIPAGEVLRPEQLKAALVIRQGQQVTLVAQGAGFKVSSEGTAMGNAATGQ 137
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
V+AVK +G ++ G G V V
Sbjct: 138 VVAVK-TRSGQIIKGIAKGDGVVEV 161
>gi|330501133|ref|YP_004378002.1| SAF domain-containing protein [Pseudomonas mendocina NK-01]
gi|328915419|gb|AEB56250.1| SAF domain-containing protein [Pseudomonas mendocina NK-01]
Length = 234
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ASV V + VI G+ ++ +L+ +V + +S +VVG +R
Sbjct: 97 SVTALVQASVFLPVVHAARVIERGQTISAEQLQLQEVNIGKAPRGFYNSFDEVVGQGAKR 156
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ +I ++L P +I RG +V I+ +Q ++ S G AL++ GDVI V+N+ +
Sbjct: 157 RVRAGQLIAPNLLTAPLLIRRGQQVTIVASQDGISASATGEALANGREGDVIRVRNLGSQ 216
Query: 135 VMVSGSVVDTGTVR 148
++ VV+ G V
Sbjct: 217 KVIEAQVVEDGVVT 230
>gi|323495383|ref|ZP_08100460.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
brasiliensis LMG 20546]
gi|323310306|gb|EGA63493.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
brasiliensis LMG 20546]
Length = 248
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + G VV + ++ G++++ + V R SI V+G
Sbjct: 114 WRVYVPVRLT----RTGPQVVLTSALSRGQLISGQDVTISMVDLQRFRRQGFSSIDAVIG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ L ++ + V+ R V I + MTI+T G+AL+D S G+ I VK
Sbjct: 170 AKAKKNLRAGEILEDRDI---CVVCRNETVTIKAVKSGMTITTKGVALTDGSHGEQIRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N + ++ G V V V+
Sbjct: 227 NSKSNRIIEGRVTGISEVTVI 247
>gi|260774932|ref|ZP_05883833.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
coralliilyticus ATCC BAA-450]
gi|260609187|gb|EEX35345.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
coralliilyticus ATCC BAA-450]
Length = 248
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ LYV + G V ++ G++++ + V R +I V+G
Sbjct: 114 WKLYVPVRLT----RSGPQVTLVGPLSRGQIISRQDVTINMVDLQRFRRQGFSNIDAVIG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
T++ L VI + + V+ R V I + MTI+T G AL+D S G+ I VK
Sbjct: 170 AKTKKNLRAGEVIESNDI---CVVCRNETVTIKAVKSGMTITTKGTALTDGSHGEQIRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N + ++ G V V V+
Sbjct: 227 NTKSNRIIEGRVTGISEVTVI 247
>gi|170725949|ref|YP_001759975.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
woodyi ATCC 51908]
gi|169811296|gb|ACA85880.1| flagella basal body P-ring formation protein FlgA [Shewanella
woodyi ATCC 51908]
Length = 235
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
D + + +++ ++ VV + G++L+ + V +N+RG
Sbjct: 93 DSPQLDYPWQIFLSVRV----DILYPVVVARETLGPGDLLSNDDVIIEYVDRTNLRGQQF 148
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
IK VVG +R + P+ I S L + +G V I N+ I T G AL D +
Sbjct: 149 DDIKQVVGTRVKRRIPPNQPIFSSNL---CFVCKGDTVSIYARSANVVIKTVGEALRDGN 205
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+GD I +KN + + +V G V V +
Sbjct: 206 LGDRIRIKNTHSNKSLHATVTGVGEVEVRM 235
>gi|116051365|ref|YP_789802.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
aeruginosa UCBPP-PA14]
gi|296388142|ref|ZP_06877617.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
aeruginosa PAb1]
gi|313108700|ref|ZP_07794696.1| putative flagella basal body P-ring formation protein [Pseudomonas
aeruginosa 39016]
gi|115586586|gb|ABJ12601.1| putative flagella basal body P-ring formation protein [Pseudomonas
aeruginosa UCBPP-PA14]
gi|310881198|gb|EFQ39792.1| putative flagella basal body P-ring formation protein [Pseudomonas
aeruginosa 39016]
Length = 232
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++++ + LF VV + VL ++ + ++ + Y VVG
Sbjct: 95 WTIFMPAQVKLF----RQVVVAVQPLKRAHVLEDADIALVERDVGLLTQGYLTDPARVVG 150
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
RR ++ D V+ L + + +G +V I+ + + G ALSD + G I V+
Sbjct: 151 QKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQIRVR 210
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N+ + ++ V++ GTV V +
Sbjct: 211 NLRSQRVIKARVIEPGTVEVNM 232
>gi|83312593|ref|YP_422857.1| flagellar basal body P-ring biosynthesis protein FlgA
[Magnetospirillum magneticum AMB-1]
gi|82947434|dbj|BAE52298.1| Flagellar basal body P-ring biosynthesis protein [Magnetospirillum
magneticum AMB-1]
Length = 324
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ VRF + S+Y + + A +G G+V+ E ++ + V +R +
Sbjct: 176 NSVRFKVMGSVYASARIPVLAHAMG----------RGDVIREDDIQWVDVREEVVRRDII 225
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+ + +VG R L + + + +P V+++ + V I+L MT++ G A+ D S
Sbjct: 226 SNARMLVGQEPRYQLRAGVPVRTNEVQKPVVVAKNSSVTIMLRSKFMTLTAQGRAIEDGS 285
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+GDVI V N+ + V + G V V+
Sbjct: 286 VGDVIRVTNVQSKQTVDAKIEGPGQVSVMP 315
>gi|51596007|ref|YP_070198.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pseudotuberculosis IP 32953]
gi|51589289|emb|CAH20910.1| flagella basal body P-ring formation protein FlgA [Yersinia
pseudotuberculosis IP 32953]
Length = 232
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ V G V + AGE ++ ++ Q + G V++
Sbjct: 96 LRRFIQTQVQVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQ 155
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R +++ G V ++ +++ G A+++ + + I V+ + +
Sbjct: 156 RQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPS 214
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG+V D GT+R+++
Sbjct: 215 GQIVSGTVADDGTIRIML 232
>gi|212634342|ref|YP_002310867.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
piezotolerans WP3]
gi|212555826|gb|ACJ28280.1| Flagellar basal-body P-ring formation protein FlgA [Shewanella
piezotolerans WP3]
Length = 237
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
D + +++ ++ VV + G++L+ S ++ V + +RG
Sbjct: 95 DSPDLSYPWQIFLSVRV----DILYPVVVAKSTLGPGDLLSSSDVEIDYVEQTTLRGQQF 150
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+ VVG +R + P I + L ++ +G V I N I T G AL D +
Sbjct: 151 DQVDQVVGARLKRRVAPQQPIFNNHL---CIVCKGDTVSIFARSENFEIKTVGEALHDGN 207
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+GD I +KN + ++ V G V V +
Sbjct: 208 LGDKIRIKNTHSQKTLNAKVTAVGQVEVRM 237
>gi|255021350|ref|ZP_05293398.1| Flagellar basal-body P-ring formation protein flgA
[Acidithiobacillus caldus ATCC 51756]
gi|254969213|gb|EET26727.1| Flagellar basal-body P-ring formation protein flgA
[Acidithiobacillus caldus ATCC 51756]
Length = 226
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ +++YV + VV + + AG VL L M +++ G S+ +
Sbjct: 86 PVPWTVYVPVRIVQSQKI----VVAAHSLTAGTVLTAGDLALMPGNAASLAGTPLSSLSE 141
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
G R + I S+L P + G V ++ + I+T A+ + G I
Sbjct: 142 ATGRTLRFGTVAGQPITQSMLAAPIWVHGGNNVTLVAEGDGVRITTLAQAIENGHPGQSI 201
Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
V+N+ +G +V G+V TVRV
Sbjct: 202 LVRNLQSGRVVRGTVTAVATVRV 224
>gi|229592136|ref|YP_002874255.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
fluorescens SBW25]
gi|229364002|emb|CAY51553.1| putative flagella basal body P-ring formation protein [Pseudomonas
fluorescens SBW25]
Length = 236
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++++V + LF VV + + ++ + + S I Y S+ VG
Sbjct: 99 WTVFVPAQVKLF----RDVVVVARPMKRTGIIGFEDVVLRERDISMISQGYLTSLDQAVG 154
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R ++ D VI L L + VI +G +V I + G + + G ALS+ + + I VK
Sbjct: 155 QKLTRPVVTDQVITLVHLEQAEVIRKGDQVVISASSGGLNVKMPGEALSNGGMSEQIRVK 214
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N+++ ++ V G V V +
Sbjct: 215 NLNSNRVIKARVTAPGQVEVAL 236
>gi|170024651|ref|YP_001721156.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pseudotuberculosis YPIII]
gi|169751185|gb|ACA68703.1| flagella basal body P-ring formation protein FlgA [Yersinia
pseudotuberculosis YPIII]
Length = 269
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ V G V + AGE ++ ++ Q + G V++
Sbjct: 133 LRRFIQTQVQVSGRYAVAVRRLVAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQ 192
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R +++ G V ++ +++ G A+++ + + I V+ + +
Sbjct: 193 RQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPS 251
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG+V D GT+R+++
Sbjct: 252 GQIVSGTVADDGTIRIML 269
>gi|149366255|ref|ZP_01888290.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
CA88-4125]
gi|218928918|ref|YP_002346793.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis CO92]
gi|229896238|ref|ZP_04511408.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
Pestoides A]
gi|229897173|ref|ZP_04512329.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229897899|ref|ZP_04513050.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. India 195]
gi|229902869|ref|ZP_04517986.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
Nepal516]
gi|115347529|emb|CAL20438.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
CO92]
gi|149292668|gb|EDM42742.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
CA88-4125]
gi|229680316|gb|EEO76415.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
Nepal516]
gi|229688940|gb|EEO81005.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. India 195]
gi|229693510|gb|EEO83559.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229701161|gb|EEO89190.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
Pestoides A]
gi|320015471|gb|ADV99042.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 232
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ V G V + AGE ++ ++ Q + G V++
Sbjct: 96 LRRFIQTQVQVSGRYAVAVRRLAAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQ 155
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R +++ G V ++ +++ G A+++ + + I V+ + +
Sbjct: 156 RQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPS 214
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG+V D GT+R+++
Sbjct: 215 GQIVSGTVADDGTIRIML 232
>gi|157147106|ref|YP_001454425.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter
koseri ATCC BAA-895]
gi|157084311|gb|ABV13989.1| hypothetical protein CKO_02883 [Citrobacter koseri ATCC BAA-895]
Length = 263
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 1 MDCVRFLLF------FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS 54
++ +RF + + + V V V+ + G+VL+ S + ++ S
Sbjct: 107 LNRLRFDVRCEGPQGWDVAVTVKP----DVYLPVVIAKNSLERGQVLSASDVSIKKLNIS 162
Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
+ RGNY + +GL +R + I L+ L P ++ RG +V +I QG + T G
Sbjct: 163 STRGNYLTDPDEAIGLTVKRRIRELQPITLTQLESPVLVERGQRVLMIAEQGGVEARTMG 222
Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
A+ G++I VKN + +VS V D G V++V
Sbjct: 223 EAMKKGRKGEMIKVKNESSERVVSAIVADAGVVKMV 258
>gi|224370759|ref|YP_002604923.1| FlgA [Desulfobacterium autotrophicum HRM2]
gi|223693476|gb|ACN16759.1| FlgA [Desulfobacterium autotrophicum HRM2]
Length = 310
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 63/134 (47%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
+ + + V + ++ GE+L L ++ S I NY + +VG+ ++
Sbjct: 175 VSMTGYVDLYDRVVCATRNLSRGEILAPKDLCLKRINVSKIPDNYLTRLDSLVGMRLKQS 234
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
L + +++ +I+RG V ++ +GNM I G+A + +GD I V N+ T
Sbjct: 235 LASNGFFRENMVEDSPLINRGDNVVLVARKGNMRIVATGVADQEGRLGDQIQVNNLTTNR 294
Query: 136 MVSGSVVDTGTVRV 149
+VSG + TV V
Sbjct: 295 VVSGRISGPKTVDV 308
>gi|90021861|ref|YP_527688.1| flagellar basal body P-ring biosynthesis protein-like protein
[Saccharophagus degradans 2-40]
gi|89951461|gb|ABD81476.1| Flageller protein FlgA [Saccharophagus degradans 2-40]
Length = 243
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+S+YV +++ + VV S + G ++E+ L + + + + ++G
Sbjct: 106 WSIYVPVDIEVYSEI----VVASRTLRRGATISEADLNVQVINIARYGSGHVQDAQRIIG 161
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R + I LS + V+S+G V I + + ++ G AL + +G I V+
Sbjct: 162 QELTRSVNAGEAIKLSHVRPAQVVSKGDTVVIEVRGNMIAVAVNGEALENGHVGKQIRVR 221
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + +V G V G V +
Sbjct: 222 NNQSKRVVDGVVSGPGRVSI 241
>gi|157959906|ref|YP_001499940.1| SAF domain-containing protein [Shewanella pealeana ATCC 700345]
gi|157844906|gb|ABV85405.1| SAF domain protein [Shewanella pealeana ATCC 700345]
Length = 254
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+SLYV + + A V + ++ GE ++ + ++ +V N + +VG
Sbjct: 117 WSLYVRATVEVRAK----VPVANRLLRRGEHISLADIEWQEVNLDASDRNLVGQLDQIVG 172
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R L I L P ++ G +V I + G AL G I V+
Sbjct: 173 RQVVRKLRRHQAIKSQQLDDPQWVNIGDRVIIEARSNGFYANMPGEALEGGGQGQAIRVR 232
Query: 130 NIDTGVMVSGSVVDTGTV 147
N+ +G ++S + G V
Sbjct: 233 NLSSGKVISAYPIAKGRV 250
>gi|126175152|ref|YP_001051301.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
baltica OS155]
gi|125998357|gb|ABN62432.1| SAF domain [Shewanella baltica OS155]
Length = 235
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ + +Y+ ++ VV + + GE+++ S+++ + +++RG
Sbjct: 93 NTQELAYPWQIYISVRV----DILFPVVVTTETLAPGELISPSQVEIRYIEQNSLRGAEF 148
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+ G+ +R + D+ I + L + + V I + + + TAG AL D +
Sbjct: 149 DDPSKLAGVRVKRRVSKDYPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGN 205
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
GD I VKN + + V G V V +
Sbjct: 206 KGDRIRVKNSSSNKELDAIVTGIGEVEVRM 235
>gi|23015789|ref|ZP_00055556.1| COG1261: Flagellar basal body P-ring biosynthesis protein
[Magnetospirillum magnetotacticum MS-1]
Length = 324
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ VRF + S+Y + + A +G GEV+ E+ ++ ++V +R +
Sbjct: 176 NSVRFKVMGSVYASARIPVLAHAMG----------RGEVIAEADIQWVEVREEVVRRDIV 225
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+ + ++G R L + + + +P + + + V I+L MT++ G A+ D S
Sbjct: 226 SNPRMLIGQEPRYQLRAGVPVRTNEVQKPLAVGKNSSVTIVLRSKFMTLTAQGRAMEDGS 285
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+GDVI V N+ + V + G V V+
Sbjct: 286 VGDVIRVTNVQSKQTVDARIEGPGQVSVMS 315
>gi|258622484|ref|ZP_05717506.1| Flagellar protein flgA precursor [Vibrio mimicus VM573]
gi|262173350|ref|ZP_06041027.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
MB-451]
gi|258585184|gb|EEW09911.1| Flagellar protein flgA precursor [Vibrio mimicus VM573]
gi|261890708|gb|EEY36695.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
MB-451]
Length = 265
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ + + VV + E + S LK + T + + ++ + + V+GL T R
Sbjct: 130 RINVTIKSVLTLPVVVAKTTLRRDETIQASDLKIEKRTLTR-QEDFYTNTQQVIGLETTR 188
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ ++ ++L ++ +G +V II ++ T +T GIAL G I V+N +G
Sbjct: 189 RIRSGQIVSPNILRSSPLVEKGNEVMIIASKDGFTATTKGIALEQGGKGQQIEVQNSASG 248
Query: 135 VMVSGSVVDTGTV 147
++ V D V
Sbjct: 249 KVIRAVVTDLNQV 261
>gi|157373211|ref|YP_001471811.1| SAF domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157315585|gb|ABV34683.1| SAF domain [Shewanella sediminis HAW-EB3]
Length = 248
Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 4/142 (2%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+SL+V + V V + + GE + ++ + + D++
Sbjct: 110 AWSLFVRAKV----KVTARLPVANRAMKRGEFIGAQDIEWHPIVLGASDRDLLTKTDDII 165
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G R L I L L+ P ++ G +V I + AG AL G+ I V
Sbjct: 166 GRQVNRKLRRHRAIQLHHLNAPQWVNIGDRVIIEARSQGFYANMAGEALESGGEGEAIRV 225
Query: 129 KNIDTGVMVSGSVVDTGTVRVV 150
KN+ +G +++ G V V
Sbjct: 226 KNLSSGKVITAFPTAKGRVTTV 247
>gi|161484755|ref|NP_670755.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis KIM 10]
gi|161511337|ref|NP_994331.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis biovar Microtus str. 91001]
gi|161760560|ref|YP_071832.2| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pseudotuberculosis IP 32953]
gi|218927908|ref|YP_002345783.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pestis CO92]
gi|270487677|ref|ZP_06204751.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
KIM D27]
gi|115346519|emb|CAL19395.1| putative flagella basal body P-ring formation protein [Yersinia
pestis CO92]
gi|270336181|gb|EFA46958.1| flagella basal body P-ring formation protein FlgA [Yersinia pestis
KIM D27]
Length = 237
Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 62/132 (46%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
++ + V + G + ++ + + ++G Y +++GL +R +
Sbjct: 101 TVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNITGVQGGYITDPDEILGLTIKRRIRQ 160
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ S L +P +++R V ++ Q + GIA + G++I VKN+ +G +V+
Sbjct: 161 LQAVIPSQLEQPVLVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVT 220
Query: 139 GSVVDTGTVRVV 150
+V +G VR++
Sbjct: 221 ATVDGSGRVRML 232
>gi|238752870|ref|ZP_04614335.1| Flagella basal body P-ring formation protein FlgA [Yersinia rohdei
ATCC 43380]
gi|238708909|gb|EEQ01162.1| Flagella basal body P-ring formation protein FlgA [Yersinia rohdei
ATCC 43380]
Length = 215
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 64/135 (47%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
++ + V + G+V+ S ++ + S +G+Y + ++VG +R
Sbjct: 76 VAVTVKPDIYLPVWVAKNTLERGKVVAPSDIELKKKNISAAQGSYITNPDEIVGFTVKRR 135
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
+ ++ + L +P +++RG V +I Q + G AL + G++I VKN+ +
Sbjct: 136 IRNLQIVTSAQLEQPVLVTRGQHVVMIAEQDGIEARMLGEALKNGRKGELIKVKNLSSKR 195
Query: 136 MVSGSVVDTGTVRVV 150
+S V D G VR++
Sbjct: 196 TISAIVEDIGKVRML 210
>gi|289679038|ref|ZP_06499928.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. syringae FF5]
gi|302185595|ref|ZP_07262268.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. syringae 642]
gi|330899392|gb|EGH30811.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. japonica str. M301072PT]
gi|330943194|gb|EGH45603.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330953710|gb|EGH53970.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae Cit 7]
Length = 222
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 62/149 (41%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + + V + ++ E + + S++ +
Sbjct: 74 TVRVRCEGSSPWTVFVPAQVLLYRNVVTVMRPLKRDAIVTEEDVAMRERDVSSLGQGFLA 133
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ VG R ++ D VI L +P ++ +G +V II G++ + G A+SD
Sbjct: 134 SLDQAVGQKVVRQMVIDQVITPVALEQPQMVHKGDQVVIIARSGSLAVRMPGEAMSDGGF 193
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ SV G V V +
Sbjct: 194 NEQIRVKNLNSQRVIKASVTGPGQVEVAM 222
>gi|28869130|ref|NP_791749.1| flagellar protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213967591|ref|ZP_03395739.1| flagellar protein [Pseudomonas syringae pv. tomato T1]
gi|301385704|ref|ZP_07234122.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. tomato Max13]
gi|302062727|ref|ZP_07254268.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. tomato K40]
gi|302134843|ref|ZP_07260833.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|28852370|gb|AAO55444.1| flagellar protein, putative [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213927892|gb|EEB61439.1| flagellar protein [Pseudomonas syringae pv. tomato T1]
gi|331019680|gb|EGH99736.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. lachrymans str. M302278PT]
Length = 248
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 62/149 (41%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + + V + ++ E + + S++ +
Sbjct: 100 TVRVRCEGSSPWTVFVPAQVQLFRNVVTVMRPLKRDAIVTEEDIAMRERDVSSLGQGFLA 159
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ VG R ++ D VI L +P +I +G +V II G++ + G A+SD
Sbjct: 160 SLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGF 219
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ +V G V V +
Sbjct: 220 NEQIRVKNLNSQRVIKANVTGPGQVEVAM 248
>gi|77460475|ref|YP_349982.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
fluorescens Pf0-1]
gi|77384478|gb|ABA75991.1| putative flagella basal body P-ring formation protein [Pseudomonas
fluorescens Pf0-1]
Length = 232
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++++V + LF V + + ++ + + S I + S+ + +G
Sbjct: 95 WTVFVPAQVRLF----REIVTTTRPLKRAGIIEPQDVTLRERDVSTINQGFLTSVDEAIG 150
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R + D VI L L + V+ +G +V I G + + G AL++ + + I VK
Sbjct: 151 QKLTRPTVADQVITLVHLEQAEVVRKGDQVVITARSGTLAVRMPGEALANGGLKEQIRVK 210
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N+++ ++ VV G V V +
Sbjct: 211 NLNSQRVIKAQVVAPGQVEVAM 232
>gi|89092130|ref|ZP_01165085.1| flagellar basal body P-ring biosynthesis protein [Oceanospirillum
sp. MED92]
gi|89083865|gb|EAR63082.1| flagellar basal body P-ring biosynthesis protein [Oceanospirillum
sp. MED92]
Length = 231
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 4/140 (2%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+ L++ + + V + VL L + + +R Y S +++
Sbjct: 94 LWQLFIAAEIKQY----QFVVTAKNSLPRRTVLQAKDLVLEERDTTTLRSAYFLSTSEII 149
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G ++R + VI S++ P +++G V I +G++ I TA AL + IG I V
Sbjct: 150 GWSSKRSISTGAVITASMVKAPIAVTKGNAVIIEAKRGSVKIRTAATALENGEIGQQIKV 209
Query: 129 KNIDTGVMVSGSVVDTGTVR 148
+N +G +V VV G VR
Sbjct: 210 RNDRSGNIVKAVVVAPGLVR 229
>gi|261856134|ref|YP_003263417.1| flagella basal body P-ring formation protein FlgA [Halothiobacillus
neapolitanus c2]
gi|261836603|gb|ACX96370.1| flagella basal body P-ring formation protein FlgA [Halothiobacillus
neapolitanus c2]
Length = 255
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + + +A+ + + G ++ L V + Y S + +G
Sbjct: 119 WRIYVPARIQT----MVNAISLARPLAPGTRISAEDLTTTPVNANQQVNAYLTSPDEAIG 174
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ R + ++ L VI RG V +I GN+++ST G+A +DA +G I VK
Sbjct: 175 QIVTRPMQAGQILTQQDLGIAKVIHRGDHVTVIAGTGNVSVSTEGVAQADAGVGQRIMVK 234
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N +G +V G V D TV +
Sbjct: 235 NSRSGQLVEGFVRDANTVVI 254
>gi|331006029|ref|ZP_08329371.1| Flagellar basal-body P-ring formation protein flgA [gamma
proteobacterium IMCC1989]
gi|330420158|gb|EGG94482.1| Flagellar basal-body P-ring formation protein flgA [gamma
proteobacterium IMCC1989]
Length = 241
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 63/145 (43%), Gaps = 4/145 (2%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+++Y L S+ +V + + G ++ ++ + +R Y
Sbjct: 101 PFPWAIYTKHLV----SIKKSVLVINKNLPKGHIVTDTDINYSTKNIRTLRNGYISDKSF 156
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
V+G +R + I L +I +G KV I G++T+ T+G AL + G+ I
Sbjct: 157 VLGSQLKRPVREGQPIYSHQLEPIELIKKGDKVNISAKVGSLTVVTSGTALDNGRKGEQI 216
Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151
VKN+ + ++ ++ +V V++
Sbjct: 217 DVKNLRSSRIIRTKIIGASSVEVIL 241
>gi|330972404|gb|EGH72470.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. aceris str. M302273PT]
Length = 222
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 62/149 (41%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + + V + ++ E + + S++ +
Sbjct: 74 TVRVRCEGSSPWTVFVPAQVLLYRNVVTVMRPLKRDAIVTEEDVAMRERDVSSLGQGFLA 133
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ VG R ++ D VI L +P +I +G +V II G++ + G A+SD
Sbjct: 134 SLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGF 193
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ SV G V V +
Sbjct: 194 NEQIRVKNLNSQRVIKASVTGPGQVEVAM 222
>gi|66046716|ref|YP_236557.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. syringae B728a]
gi|63257423|gb|AAY38519.1| Flageller protein FlgA [Pseudomonas syringae pv. syringae B728a]
Length = 252
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 62/149 (41%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + + V + ++ E + + S++ +
Sbjct: 104 TVRVRCEGSSPWTVFVPAQVLLYRNVVTVMRPLKRDAIVTEEDVAMRERDVSSLGQGFLA 163
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ VG R ++ D VI L +P +I +G +V II G++ + G A+SD
Sbjct: 164 SLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGF 223
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ SV G V V +
Sbjct: 224 NEQIRVKNLNSQRVIKASVTGPGQVEVAM 252
>gi|153947896|ref|YP_001401294.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
pseudotuberculosis IP 31758]
gi|152959391|gb|ABS46852.1| flagella basal body P-ring formation protein FlgA [Yersinia
pseudotuberculosis IP 31758]
Length = 232
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ V G V + AGE ++ ++ Q + G V++
Sbjct: 96 LRRFIQTQVQVSGRYAVAVRRLVAGEKISAQDIQMKQGRLDTLPPGALLDAHFAQGAVSQ 155
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R +++ G V ++ +++ G A+++ + + I V+ + +
Sbjct: 156 RQINAGQPLTRNMLRRLWLVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPS 214
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG+V D GT+R+++
Sbjct: 215 GQIVSGTVADDGTIRIML 232
>gi|304409984|ref|ZP_07391603.1| flagella basal body P-ring formation protein FlgA [Shewanella
baltica OS183]
gi|307302303|ref|ZP_07582061.1| flagella basal body P-ring formation protein FlgA [Shewanella
baltica BA175]
gi|304351393|gb|EFM15792.1| flagella basal body P-ring formation protein FlgA [Shewanella
baltica OS183]
gi|306914341|gb|EFN44762.1| flagella basal body P-ring formation protein FlgA [Shewanella
baltica BA175]
Length = 235
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
D + +Y+ ++ VV + + GE+++ S+++ + +++RG
Sbjct: 93 DTQELAYPWQIYISVRV----DILFPVVVTTETLAPGELISPSQVEIRYIEQNSLRGAEF 148
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+ G+ +R + D+ I + L + + V I + + + TAG AL D +
Sbjct: 149 DDPSKLAGVRVKRRVSKDYPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGN 205
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
GD I VKN + + V G V V +
Sbjct: 206 KGDRIRVKNSSSNKELDAIVTGIGEVEVRM 235
>gi|153001478|ref|YP_001367159.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
baltica OS185]
gi|151366096|gb|ABS09096.1| SAF domain protein [Shewanella baltica OS185]
Length = 235
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
D + +Y+ ++ VV + + GE+++ S+++ + +++RG
Sbjct: 93 DTQELAYPWQIYISVRV----DILFPVVVTTETLAPGELISPSQVEIRYIEQNSLRGAEF 148
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+ G+ +R + D+ I + L + + V I + + + TAG AL D +
Sbjct: 149 DDPSKLAGVRVKRRVSKDNPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGN 205
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
GD I VKN + + V G V V +
Sbjct: 206 KGDRIRVKNSSSNKELDAIVTGIGEVEVRM 235
>gi|127512273|ref|YP_001093470.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
loihica PV-4]
gi|126637568|gb|ABO23211.1| SAF domain protein [Shewanella loihica PV-4]
Length = 235
Score = 116 bits (292), Expect = 6e-25, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 7/149 (4%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
+ +Y+ V+ VV + + G+++ +++ V S +RG
Sbjct: 94 SPDLDYPWQIYISVRV----EVLFPVVVANQTLGPGDLIESDQIRLDYVEQSQLRGQQFD 149
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
V G +R + + + S L + +G V I N I T G AL D ++
Sbjct: 150 DPVAVTGTRVKRRIPANQPLFASNL---CFVCKGDIVAIYARADNFVIKTNGEALKDGNL 206
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
GD I V+N + V V G V V +
Sbjct: 207 GDKIQVRNSRSNKTVDAHVTGIGEVEVRM 235
>gi|94267695|ref|ZP_01290964.1| Flageller protein FlgA [delta proteobacterium MLMS-1]
gi|93451897|gb|EAT02628.1| Flageller protein FlgA [delta proteobacterium MLMS-1]
Length = 242
Score = 116 bits (292), Expect = 6e-25, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 69/148 (46%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
V L+ + +G VV + IN GE++ L + SN+ GN+
Sbjct: 95 VTLLVNGRDQAEVRLNADLQRMGEVVVSARRINRGELIGSDDLMVQRRNISNLDGNFVSD 154
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
++ VG R + P V+ S L +P ++ RG +VRII QG + +S G + G
Sbjct: 155 PREAVGKQLRTTIQPGAVLHQSRLEKPPLVRRGDRVRIIAHQGRVRVSAPGEVRDLGAEG 214
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+++ V+N+ + + V+D TV ++
Sbjct: 215 ELVRVRNLMSRQEIQARVIDGSTVETIL 242
>gi|157376222|ref|YP_001474822.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
sediminis HAW-EB3]
gi|157318596|gb|ABV37694.1| SAF domain protein [Shewanella sediminis HAW-EB3]
Length = 259
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ + + +++ V+ VV + ++++ + V +++RG
Sbjct: 117 NSPQLQYPWQIFLSVRV----DVLYPVVVSRETLGPDDLISSGDVAIQYVEQTSLRGQQF 172
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
I+DVVG +R + P+ I ++ L + +G V I N I T G AL D +
Sbjct: 173 DKIEDVVGTRVKRRIPPNQPIFINNL---CFVCKGDTVSIFARSKNFEIKTVGEALRDGN 229
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+GD I +KN + + V G V V +
Sbjct: 230 LGDRIRIKNSYSNKSLDAKVTGVGEVEVRM 259
>gi|325982376|ref|YP_004294778.1| flagella basal body P-ring formation protein FlgA [Nitrosomonas sp.
AL212]
gi|325531895|gb|ADZ26616.1| flagella basal body P-ring formation protein FlgA [Nitrosomonas sp.
AL212]
Length = 249
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 5/149 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C + +++YV + + V+ + + + I G+++ + + +
Sbjct: 104 VRCNSGIATWTIYVQAEIN----VMSNVLHTARPIATGQIITNEDIAPQNTNLTQLPEGI 159
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+VG V L + +L PYVI RG V +++ I + G AL+DA
Sbjct: 160 LTDASLIVGKVAATNLPAGQPLRPQMLRAPYVILRGQTVSLVVQGRGFNIQSEGQALADA 219
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ G VI V+N +G +VSG V +
Sbjct: 220 ADGQVIQVRN-KSGRIVSGLARPNSIVEI 247
>gi|238764388|ref|ZP_04625338.1| Flagella basal body P-ring formation protein flgA [Yersinia
kristensenii ATCC 33638]
gi|238697414|gb|EEP90181.1| Flagella basal body P-ring formation protein flgA [Yersinia
kristensenii ATCC 33638]
Length = 233
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ V G V + + AG + ++ Q + G V+
Sbjct: 97 LRRFIQTQVQVSGQYAVAARQLTAGAKITPQDIEMKQGRLDTLPPGALLEPSFAQGAVSL 156
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R +V+ G V+++ ++ +G A+++A++ D + V+ + +
Sbjct: 157 RQINAGQPLTRNMLRRLWVVKAGQYVQVLAQGDGFNVNGSGKAMNNAAVQDNVRVR-MAS 215
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG+V D G +++++
Sbjct: 216 GQIVSGTVSDDGIIKIIL 233
>gi|238762363|ref|ZP_04623334.1| Flagella basal body P-ring formation protein FlgA [Yersinia
kristensenii ATCC 33638]
gi|238699348|gb|EEP92094.1| Flagella basal body P-ring formation protein FlgA [Yersinia
kristensenii ATCC 33638]
Length = 249
Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 63/135 (46%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
++ + V + G+++ ++ + S +G Y + ++VGL +R
Sbjct: 110 VSVTVKPDIYLPVWVAKSTLERGKLVAPDDIELKKKNISTAQGGYITNPDEIVGLTVKRR 169
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
+ V+ S L +P +++RG +V +I Q + G AL + G++I VKN+ +
Sbjct: 170 IRGLQVVTPSQLEQPVLVTRGQQVLMIAEQEGIEARMLGEALKNGRKGELIKVKNLSSKR 229
Query: 136 MVSGSVVDTGTVRVV 150
V+ V D VR++
Sbjct: 230 TVTAIVDDIARVRML 244
>gi|23092309|gb|AAN08634.1| FlgA [Aeromonas hydrophila]
Length = 339
Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ LY+ S+ V S + G++L+E L + IRG+Y ++G
Sbjct: 205 WDLYLPVRV----SIQKPYVTVSAPVAKGDILSEGMLTLAYQDQTLIRGDYLSDPTPLIG 260
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ ++R L P I L+ + V+ +G +V + +M I T AL D S GD+I +
Sbjct: 261 VRSKRELKPGQPIRLTQV---CVVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLV 317
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
NI +G V G V G V V
Sbjct: 318 NIRSGKTVQGKVSAVGAVVV 337
>gi|217972592|ref|YP_002357343.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
baltica OS223]
gi|217497727|gb|ACK45920.1| flagella basal body P-ring formation protein FlgA [Shewanella
baltica OS223]
Length = 235
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
D + +Y+ ++ VV + + GE+++ S+++ + +++RG
Sbjct: 93 DTQELAYPWQIYISVRV----DILFPVVVTTETLAPGELISPSQVEIRYIEQNSLRGAEF 148
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+ G+ +R + D+ I + L + + V I + + + TAG AL D +
Sbjct: 149 DDPGKLAGVRVKRRVSKDNPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGN 205
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
GD I VKN + + V G V V +
Sbjct: 206 KGDRIRVKNSSSNKELDAIVTGIGEVEVRM 235
>gi|149374965|ref|ZP_01892738.1| flagellar basal body P-ring biosynthesis protein [Marinobacter
algicola DG893]
gi|149360854|gb|EDM49305.1| flagellar basal body P-ring biosynthesis protein [Marinobacter
algicola DG893]
Length = 234
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 66/137 (48%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ G A+V + + GE L ++ ++ V ++IR +I+ +VG+ RR
Sbjct: 98 RMFLPVSVTITGDAMVAARPLGRGERLTKAAIRSDNVVVNSIRRGAITNIEQLVGMEMRR 157
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ V ++ P I RG V I GN ++++ G AL+ SIG+ + V+N+ +
Sbjct: 158 GVNTGTVFTPDLVLAPAAIERGDHVIISARSGNFSVNSRGKALASGSIGEQVLVENLSSS 217
Query: 135 VMVSGSVVDTGTVRVVV 151
V V G V + +
Sbjct: 218 RTVRARVTAPGHVEIPM 234
>gi|298529925|ref|ZP_07017327.1| flagella basal body P-ring formation protein FlgA
[Desulfonatronospira thiodismutans ASO3-1]
gi|298509299|gb|EFI33203.1| flagella basal body P-ring formation protein FlgA
[Desulfonatronospira thiodismutans ASO3-1]
Length = 327
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 5/152 (3%)
Query: 2 DCVRFLLF---FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
+ +RF++ + ++F V +N G+V+ ++ + + IR
Sbjct: 178 NSLRFVVRDGHGEVVRRHTGNVFVDVWVTVACAERPLNRGDVIEPGDVRFEEKNLAYIRR 237
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
R + I L ++SRGAKV ++ ++T+ G L
Sbjct: 238 EVWDGESGP--WRIRSSIGQGQPIYKRHLEPVPMVSRGAKVDMVYEGNHLTLVVPGEVLE 295
Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
D GD I V+N+ + V +V +G V
Sbjct: 296 DGQRGDRIMVRNMQSEKEVRATVESSGRVTTR 327
>gi|94263286|ref|ZP_01287102.1| Flageller protein FlgA [delta proteobacterium MLMS-1]
gi|93456369|gb|EAT06493.1| Flageller protein FlgA [delta proteobacterium MLMS-1]
Length = 242
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 67/148 (45%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
V L+ + +G VV + IN GE++ L + SN+ N+
Sbjct: 95 VTLLVNGRDQAEVRLNADLQRMGEVVVSARRINRGELIGSDDLMVQRRNISNLDSNFVSD 154
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
++ VG R + P V+ S L P ++ RG +VRII QG + +S G + G
Sbjct: 155 PREAVGKQLRTTIQPGAVLHQSRLENPPLVRRGDRVRIIAHQGRVRVSAPGEVRDIGAEG 214
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+++ V+N+ + + V+D TV ++
Sbjct: 215 ELVRVRNLMSRQEIQARVIDGSTVETIL 242
>gi|254491860|ref|ZP_05105039.1| hypothetical protein MDMS009_2195 [Methylophaga thiooxidans DMS010]
gi|224463338|gb|EEF79608.1| hypothetical protein MDMS009_2195 [Methylophaga thiooxydans DMS010]
Length = 232
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++YV V+ VV + + A E L+++ + + +R Y S V+G
Sbjct: 95 WTVYVPVKV----KVLQPVVVAARSLVANETLSKADITLEMMDIGELRQGYIQSTDKVIG 150
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ L +P L + VI RG ++ ++ + G+M + G A+ DAS+G+ + VK
Sbjct: 151 QQLKYPLSMGMALPPRGLKQEKVIRRGEQIILVASAGSMEVRMNGTAMGDASVGEKVKVK 210
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N + +V G V G V+V +
Sbjct: 211 NSSSKRVVEGIVHAPGVVKVTM 232
>gi|212637781|ref|YP_002314306.1| flageller protein FlgA [Shewanella piezotolerans WP3]
gi|212559265|gb|ACJ31719.1| Flageller protein FlgA [Shewanella piezotolerans WP3]
Length = 248
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++LYV + + A V + ++ GE ++ + ++ QV S + ++ ++G
Sbjct: 111 WNLYVRASVQVSA----RLPVANRILKRGEHISAADIEWQQVKLSVSDRDLVTELEQIIG 166
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R L VI L +P ++ G KV I + +G AL G I V+
Sbjct: 167 QQVVRKLRRHRVIKAQQLGKPQWVNIGDKVIIEARSNGFYANMSGEALEAGGEGKAIRVR 226
Query: 130 NIDTGVMVSGSVVDTGTV 147
N+ +G ++S + G V
Sbjct: 227 NLSSGKIISAYPIAKGRV 244
>gi|160876209|ref|YP_001555525.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
baltica OS195]
gi|160861731|gb|ABX50265.1| flagella basal body P-ring formation protein FlgA [Shewanella
baltica OS195]
gi|315268399|gb|ADT95252.1| flagella basal body P-ring formation protein FlgA [Shewanella
baltica OS678]
Length = 235
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 7/146 (4%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
+ +Y+ ++ VV + + GE+++ S+++ + +++RG
Sbjct: 97 LAYPWQIYISVRV----DILFPVVVTTETLAPGELISPSQVEIRYIEQNSLRGAEFDDPS 152
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
+ G+ +R + D+ I + L + + V I + + + TAG AL D + GD
Sbjct: 153 KLAGVRVKRRVSKDYPILSNNL---CFVCKNDSVSIYVRSNSFELKTAGEALQDGNKGDR 209
Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
I VKN + + V G V V +
Sbjct: 210 IRVKNSSSNKELDAIVTGIGEVEVRM 235
>gi|258625238|ref|ZP_05720150.1| Flagellar protein flgA precursor [Vibrio mimicus VM603]
gi|258582485|gb|EEW07322.1| Flagellar protein flgA precursor [Vibrio mimicus VM603]
Length = 265
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ + + VV + E + ES LK + T + + ++ + + V+GL T R
Sbjct: 130 RINVTIKSVLTLPVVVAKTTLRRDETIQESNLKIEKRTLTR-QEDFYTNTQQVIGLETTR 188
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ ++ ++L ++ +G +V II ++ T +T GIAL G I V+N +G
Sbjct: 189 RIRSGQIVNPNILRSSPLVEKGNEVMIIASKDGFTATTKGIALEQGGKGQQIEVQNSASG 248
Query: 135 VMVSGSVVDTGTV 147
++ V D V
Sbjct: 249 KVIRAVVTDLNQV 261
>gi|318604248|emb|CBY25746.1| flagellar basal-body P-ring formation protein FlgA [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 234
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 61/135 (45%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
++ + V + G+++ ++ + S +G Y ++VG +R
Sbjct: 95 VAVTVKPDIYLPVWVAKNTLERGKLVAPDDIELKKKNISTAQGGYITDPDEIVGFTVKRR 154
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
+ V+ S L +P +++RG +V +I Q + G AL + G++I VKNI +
Sbjct: 155 IRNLQVVIPSQLEQPVLVTRGQQVLMIAEQDGIEARMFGEALKNGRKGELIKVKNISSKR 214
Query: 136 MVSGSVVDTGTVRVV 150
V+ V D VR++
Sbjct: 215 TVTAMVDDVAKVRML 229
>gi|330875965|gb|EGH10114.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. morsprunorum str. M302280PT]
Length = 248
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 63/149 (42%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + + V + +++E + + S++ +
Sbjct: 100 TVRVRCEGSSPWTVFVPAQVRLFRNVVTVMRPLKRDAIVSEEDVALRERDVSSLGQGFLA 159
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ VG R ++ D VI L +P +I +G +V II G++ + G A+SD
Sbjct: 160 SLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGF 219
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ +V G V V +
Sbjct: 220 NEQIRVKNLNSQRVIKANVTGPGQVEVAM 248
>gi|308050378|ref|YP_003913944.1| flagella basal body P-ring formation protein FlgA [Ferrimonas
balearica DSM 9799]
gi|307632568|gb|ADN76870.1| flagella basal body P-ring formation protein FlgA [Ferrimonas
balearica DSM 9799]
Length = 234
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 7/142 (4%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+SLYV VV + +NA +L L+ + +RG +VG
Sbjct: 100 WSLYVPVQTRF----EYPVVVATTTLNADAILEPQHLRVEYRDANTLRGKTVSDPSQLVG 155
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R + + + + ++ G V I G + I T+G A ++GD I V+
Sbjct: 156 ARLVRRIGNGQPVSSNNI---CLVCSGDLVTIYARTGGIEIKTSGEARGSGALGDTIRVQ 212
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N + ++ VV G V V +
Sbjct: 213 NSRSQRIIDARVVGIGEVEVRM 234
>gi|298487866|ref|ZP_07005906.1| Flagellar basal-body P-ring formation protein flgA [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298157591|gb|EFH98671.1| Flagellar basal-body P-ring formation protein flgA [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 252
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 62/149 (41%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + + V + ++ E + + S++ +
Sbjct: 104 TVRVRCEGSSPWTVFVPAQVLLYRNVVTVMRPLKRDAIVTEEDVALRERDVSSLGQGFLA 163
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ VG R ++ D V+ L +P +I +G +V II G++ + G A+SD
Sbjct: 164 SLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGF 223
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ +V G V V +
Sbjct: 224 NEQIRVKNLNSQRVIKANVTGPGQVEVAM 252
>gi|330811241|ref|YP_004355703.1| flagella basal body P-ring formation protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327379349|gb|AEA70699.1| Putative flagella basal body P-ring formation protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 254
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++++V + LF V + + ++ + + S I + S+ +G
Sbjct: 117 WTVFVPAQVRLF----REIVTTTRPLKRAGIVEPQDVMLRERDISQITQGFLTSVDQAIG 172
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R ++ D V+ L L + V+ +G +V I G++ + G ALS+ + + I VK
Sbjct: 173 QKLVRPMVADQVVTLVHLEQAEVVRKGDQVVITARTGSLAVRMPGEALSNGGMREQIRVK 232
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N+++ ++ V+ G V V +
Sbjct: 233 NLNSQRVIKAQVMAPGQVEVAM 254
>gi|289627754|ref|ZP_06460708.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. aesculi str. NCPPB3681]
gi|289647434|ref|ZP_06478777.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. aesculi str. 2250]
gi|330866413|gb|EGH01122.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. aesculi str. 0893_23]
Length = 222
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 62/149 (41%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + + V + ++ E + + S++ +
Sbjct: 74 TVRVRCEGSSPWTVFVPAQVLLYRNVVTVMRPLKRDAIVTEEDVALRERDVSSLGQGFLA 133
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ VG R ++ D V+ L +P +I +G +V II G++ + G A+SD
Sbjct: 134 SLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGF 193
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ +V G V V +
Sbjct: 194 NEQIRVKNLNSQRVIKANVTGPGQVEVAM 222
>gi|254230144|ref|ZP_04923539.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio
sp. Ex25]
gi|151937337|gb|EDN56200.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio
sp. Ex25]
Length = 262
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S+ +V + + GE+++ S + + R + + VVG
Sbjct: 128 WKVYVPVRISVSV----PMIVATRTLGRGEIVSASDVTTSMIELQRFRKDGFSNYDQVVG 183
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + V+ + + V+ R KV I MTI+T G AL D + GD + VK
Sbjct: 184 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIKAVNSGMTITTQGTALQDGAAGDQVRVK 240
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V + V
Sbjct: 241 NDKSQRIIEGIVTGIAEITV 260
>gi|257484959|ref|ZP_05639000.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. tabaci ATCC 11528]
gi|331011033|gb|EGH91089.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 222
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 62/149 (41%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + + V + ++ E + + S++ +
Sbjct: 74 TVRVRCEGSSPWTVFVPAQVLLYRNVVTVMRPLKRDAIVTEQDVALRERDVSSLGQGFLA 133
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ VG R ++ D V+ L +P +I +G +V II G++ + G A+SD
Sbjct: 134 SLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVIIIARSGSLAVRMPGEAMSDGGF 193
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ +V G V V +
Sbjct: 194 NEQIRVKNLNSQRVIKANVTGPGQVEVAM 222
>gi|237799198|ref|ZP_04587659.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|237806217|ref|ZP_04592921.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331022053|gb|EGI02110.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331027330|gb|EGI07385.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 252
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 61/149 (40%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + + V + ++ E + + S++ +
Sbjct: 104 TVRVRCEGSSPWTVFVPAQVQLFRNVVTVMRPLKRDAIVTEQDVAMRERDVSSLGQGFLA 163
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ VG R ++ D V+ L +P +I +G +V II G + + G A+SD
Sbjct: 164 SLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARTGTLAVRMPGEAMSDGGF 223
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ SV G V V +
Sbjct: 224 NEQIRVKNLNSQRVIKASVTGPGQVEVAM 252
>gi|113969600|ref|YP_733393.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
sp. MR-4]
gi|113884284|gb|ABI38336.1| flagellar basal-body P-ring formation protein FlgA, putative
[Shewanella sp. MR-4]
Length = 235
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
D + +++ ++ VV S + GE++N S+++ V +++RG
Sbjct: 93 DTPDLAYPWQIFMSVRV----DILFPVVVASETLAPGELINPSQVEIRYVDQNSLRGMQF 148
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+ G+ +R + I + L + + V I + N + T G AL D +
Sbjct: 149 SDTNQISGVRVKRRVAKHFPIFANNL---CFVCKNDSVSIYVRSSNFVLKTVGEALQDGN 205
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
IGD I VKN + + V G V V +
Sbjct: 206 IGDQIRVKNSSSNKELDAIVTAIGEVEVRM 235
>gi|238788311|ref|ZP_04632105.1| Flagella basal body P-ring formation protein flgA [Yersinia
frederiksenii ATCC 33641]
gi|238723557|gb|EEQ15203.1| Flagella basal body P-ring formation protein flgA [Yersinia
frederiksenii ATCC 33641]
Length = 226
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
V GH V + + +G + ++ Q + G V+ R +
Sbjct: 93 FIQTQVQVSGHYAVAARRLPSGAKITPEDIEMKQGRLDTLPPGALLEPHFAQGAVSLRQI 152
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ ++L R +VI G V+++ +++ G A+++ ++ D + V+ + +G +
Sbjct: 153 NAGQPLTRNMLRRLWVIKAGQDVQVLAQGEGFNVNSNGKAMNNGAVQDNVRVR-MASGQI 211
Query: 137 VSGSVVDTGTVRVVV 151
VSG+V + GT+R+++
Sbjct: 212 VSGTVAEDGTIRIML 226
>gi|295678062|ref|YP_003606586.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
CCGE1002]
gi|295437905|gb|ADG17075.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
CCGE1002]
Length = 493
Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + SL A + + + GEVL + L + + + VG
Sbjct: 357 WTIYLQARISLHA----TYYLAARAMAPGEVLTAADLVAREGDLTGLPQAIVTDPSQAVG 412
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
V+ + + +L + G VR++ +IS+ G A+++AS G + VK
Sbjct: 413 SVSLVRISGGMPLRRDMLKSASAVVFGQTVRVVAAGDGFSISSEGSAMNNASPGQQVRVK 472
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
G ++SG V D GTV + +
Sbjct: 473 -TANGQIISGIVKDGGTVEIQM 493
>gi|330892071|gb|EGH24732.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. mori str. 301020]
gi|330986458|gb|EGH84561.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. lachrymans str. M301315]
Length = 222
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 62/149 (41%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + + V + ++ E + + S++ +
Sbjct: 74 TVRVRCEGSSPWTVFVPAQVLLYRNVVTVMRPLKRDAIVTEQDVALRERDVSSLGQGFLA 133
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ VG R ++ D V+ L +P +I +G +V II G++ + G A+SD
Sbjct: 134 SLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGF 193
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ +V G V V +
Sbjct: 194 NEQIRVKNLNSQRVIKANVTGPGQVEVAM 222
>gi|114046832|ref|YP_737382.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
sp. MR-7]
gi|113888274|gb|ABI42325.1| flagellar basal-body P-ring formation protein FlgA, putative
[Shewanella sp. MR-7]
Length = 235
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
D + +++ ++ VV S + GE++N S+++ V +++RG
Sbjct: 93 DTPDLAYPWQIFMSVRV----DILFPVVVASETLAPGELINPSQVEIRYVDQNSLRGMQF 148
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+ G+ +R + I + L + + V I + N + T G AL D +
Sbjct: 149 SDTNQISGVRVKRRVAKHFPIFANNL---CFVCKNDSVSIYVRSSNFVLKTVGEALQDGN 205
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
IGD I VKN + + V G V V +
Sbjct: 206 IGDQIRVKNSSSNKELDAIVTAIGEVEVRM 235
>gi|317492432|ref|ZP_07950861.1| flagella basal body P-ring formation protein FlgA
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919771|gb|EFV41101.1| flagella basal body P-ring formation protein FlgA
[Enterobacteriaceae bacterium 9_2_54FAA]
Length = 226
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ V G V S ++ G+ ++ + MQ + I + V R L
Sbjct: 94 LQVEVQVTGGYPVASAPLSRGQHISAADFNIMQGRLDRLPTGSIMEISQLDNAVLTRDLA 153
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ S++ R ++I G V+I+ +++ G AL++A+I D + V+ + +G ++
Sbjct: 154 AGQSVTSSMMRRTWIIKAGQSVQILAQGDGFNVTSEGKALNNAAIADNVRVR-LASGQII 212
Query: 138 SGSVVDTGTVRVVV 151
SG + GT+ +++
Sbjct: 213 SGKATEQGTIELLM 226
>gi|297580849|ref|ZP_06942774.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297534675|gb|EFH73511.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 255
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + + + + ++ G++++ + V R + ++V+G
Sbjct: 121 WRVYVPVRLT----ITIPLITAATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 176
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ + VI + + ++ R V I + M+I+T G A+SD +G+ I VK
Sbjct: 177 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 233
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ V G V V
Sbjct: 234 NDKSNRIIDAQVSGVGEVTV 253
>gi|156973578|ref|YP_001444485.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
harveyi ATCC BAA-1116]
gi|156525172|gb|ABU70258.1| hypothetical protein VIBHAR_01281 [Vibrio harveyi ATCC BAA-1116]
Length = 248
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S +V + + GE+++ S + + R + + V+G
Sbjct: 114 WKVYVPVRISASV----PMIVSTRQLGRGEIISASDVTTSMIELQRFRKDGFTTYDQVIG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + V+ + + V+ R KV I +G MTI+T G AL D S GD + VK
Sbjct: 170 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIQAVKGGMTITTQGTALQDGSAGDQVRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V + +
Sbjct: 227 NDKSQRIIEGIVTGIAEITI 246
>gi|238799103|ref|ZP_04642559.1| Flagella basal body P-ring formation protein flgA [Yersinia
mollaretii ATCC 43969]
gi|238717050|gb|EEQ08910.1| Flagella basal body P-ring formation protein flgA [Yersinia
mollaretii ATCC 43969]
Length = 234
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V V G V S + AG + ++ Q + + G V+
Sbjct: 98 VRRFIQTQVQVSGRYAVASRQLAAGAKITAQDVEMKQGRLDTLPPGALLEPQFAQGSVSL 157
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R ++I G V+++ +++ G A+++A+I D + V+ + +
Sbjct: 158 RQINAGQPLTRNMLRRLWIIKSGQDVQVLAQGDGFNVNSNGKAMNNAAIQDSVRVR-MPS 216
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG V D GT+R+++
Sbjct: 217 GQIVSGVVADDGTIRIML 234
>gi|24374764|ref|NP_718807.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
oneidensis MR-1]
gi|24349430|gb|AAN56251.1|AE015762_8 flagellar basal-body P-ring formation protein FlgA, putative
[Shewanella oneidensis MR-1]
Length = 235
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 66/150 (44%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ + +++ ++ VV + + GE+++ ++++ V +++RG
Sbjct: 93 NTPDLAYPWQIFISVRV----DILFPVVVATEPLAPGELISPTQVEIRYVDQNSLRGMQF 148
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
I + G+ +R + ++ I + L + + V I + N + T G AL D +
Sbjct: 149 SDINQLSGVRVKRRVAKNNPIFANNL---CFVCKNDAVSIYVRSSNFVLKTVGEALQDGN 205
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
IGD I VKN + + +V G V V +
Sbjct: 206 IGDQIRVKNSSSNKELDATVTAIGEVEVRM 235
>gi|320325083|gb|EFW81152.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. glycinea str. B076]
gi|320329342|gb|EFW85335.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330880507|gb|EGH14656.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 222
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 62/149 (41%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + + V + ++ E + + S++ +
Sbjct: 74 TVRVRCEGSSPWTVFVPAQVLLYRNVVTVIRPLKRDAIVTEQDVALRERDVSSLGQGFLA 133
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ VG R ++ D V+ L +P +I +G +V II G++ + G A+SD
Sbjct: 134 SLDQAVGQKVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGF 193
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ +V G V V +
Sbjct: 194 NEQIRVKNLNSQRVIKANVTGPGQVEVAM 222
>gi|332162905|ref|YP_004299482.1| flagella basal body P-ring formation protein FlgA [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325667135|gb|ADZ43779.1| Flagella basal body P-ring formation protein FlgA [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330863355|emb|CBX73478.1| hypothetical protein YEW_ES20730 [Yersinia enterocolitica W22703]
Length = 234
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 61/135 (45%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
++ + V + G+++ ++ + S +G Y ++VG +R
Sbjct: 95 VAVTVKPDIYLPVWVAKNTLERGKLVVPDDIELKKKNISTAQGGYITDPDEIVGFTVKRR 154
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
+ V+ S L +P +++RG +V +I Q + G AL + G++I VKNI +
Sbjct: 155 IRNLQVVIPSQLEQPVLVTRGQQVLMIAEQDGIEARMFGEALKNGRKGELIKVKNISSKR 214
Query: 136 MVSGSVVDTGTVRVV 150
V+ V D VR++
Sbjct: 215 TVTAMVDDVAKVRML 229
>gi|187478181|ref|YP_786205.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
avium 197N]
gi|115422767|emb|CAJ49295.1| flagella basal body P-ring formation protein [Bordetella avium
197N]
Length = 249
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 5/142 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++YV + + V G V S I AG+ + L + N+ + +VG
Sbjct: 113 WTVYVQASLN----VPGIYYVASRQIPAGQAITSEDLDSREGDLMNLPPGAMTDARSIVG 168
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ R + I S L ISRG VRII +S+ G AL D + G I V+
Sbjct: 169 MQARHRINIGQPIRGSALRDAASISRGQNVRIIARGNGFVVSSEGQALEDGAPGATIQVR 228
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
+G +VSG + G V + +
Sbjct: 229 -TQSGQVVSGVLQPGGQVELQL 249
>gi|71735190|ref|YP_275572.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|71555743|gb|AAZ34954.1| flagellar basal-body P-ring formation protein FlgA, putative
[Pseudomonas syringae pv. phaseolicola 1448A]
Length = 252
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 62/149 (41%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + + V + ++ E + + S++ +
Sbjct: 104 TVRVRCEGSSPWTVFVPAQVLLYRNVVTVIRPLKRDAIVTEQDVALRERDVSSLGQGFLA 163
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ VG R ++ D V+ L +P +I +G +V II G++ + G A+SD
Sbjct: 164 SLDQAVGQTVVRQMVIDQVVTPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGGF 223
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ +V G V V +
Sbjct: 224 NEQIRVKNLNSQRVIKANVTGPGQVEVAM 252
>gi|145298485|ref|YP_001141326.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas
salmonicida subsp. salmonicida A449]
gi|142851257|gb|ABO89578.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 339
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ LY+ S+ V + + G++L+ES L + IRG+Y ++G
Sbjct: 205 WDLYLPVRV----SIQKPYVTVATPVAKGDILSESVLTLAYQDQTQIRGDYLSDQAPLIG 260
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ ++R L P I LS + V+ +G +V + +M I T AL D S GD+I++
Sbjct: 261 VRSKRELKPGQPIRLSQV---CVVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMISLV 317
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
NI +G V G V G+V V
Sbjct: 318 NIRSGKTVQGKVSAVGSVVV 337
>gi|163784419|ref|ZP_02179303.1| flagella basal body P-ring formation protein [Hydrogenivirga sp.
128-5-R1-1]
gi|159880310|gb|EDP73930.1| flagella basal body P-ring formation protein [Hydrogenivirga sp.
128-5-R1-1]
Length = 317
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 2/146 (1%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
F +F + Y + S+ AVV I G +++ +K +V N Y +I
Sbjct: 171 FDIFINHY-KTSASVRYFKTTKAVVAKRYIPKGSIISYDDVKIDKVKAKN-DERYFTNIN 228
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
++G R + I L L + Y + R V ++ + I G AL + +GD+
Sbjct: 229 KLIGKKLRFAVKKGQPITLKYLEKEYYVFRNTNVEVLYEKNGFRIRLLGRALENGELGDL 288
Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
I V+N +G ++ V+ V+ +
Sbjct: 289 IRVRNTSSGKVILCKVIGKNKVKFIS 314
>gi|209522282|ref|ZP_03270910.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
H160]
gi|209497276|gb|EDZ97503.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
H160]
Length = 342
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + S+ A + + + GEVL + L + + VG
Sbjct: 206 WTIYLQARISVHA----TYYLAARAMAPGEVLTAADLVARDGDLTGLPQAIVTDPSQAVG 261
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
V+ L + +L ++ G VR++ +IS+ G A+++AS G + VK
Sbjct: 262 SVSLVRLAGGMPLRRDMLKSAAAVAFGQTVRVVAAGDGFSISSEGSAMNNASPGQQVRVK 321
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
G +VSG V D GTV + +
Sbjct: 322 -TANGQIVSGIVKDGGTVEIQM 342
>gi|117919766|ref|YP_868958.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
sp. ANA-3]
gi|117612098|gb|ABK47552.1| flagellar basal-body P-ring formation protein FlgA, putative
[Shewanella sp. ANA-3]
Length = 235
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 63/150 (42%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
D + +++ ++ VV S + GE+++ ++++ + +++RG
Sbjct: 93 DTPDLAYPWQIFMSVRV----DILFPVVVASETLAPGELISPTQVEIRYIDQNSLRGMQF 148
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+ G+ +R + + I + L + + V I + N + T G AL D +
Sbjct: 149 SDTSQLSGVRVKRRVAKNFPIFANNL---CFVCKNDSVSIYVRSSNFVLKTVGEALQDGN 205
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
IGD I VKN + + V G V V +
Sbjct: 206 IGDQIRVKNSSSNKELDAIVTAIGEVEVRM 235
>gi|153834451|ref|ZP_01987118.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi
HY01]
gi|148869147|gb|EDL68179.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi
HY01]
Length = 243
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S +V + + GE+++ S + + R + + V+G
Sbjct: 109 WKVYVPVRISASV----PMIVSTRQLGRGEIISASDVTTSMIELQRFRKDGFTTYDQVIG 164
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + V+ + + V+ R KV I +G MTI+T G AL D S GD + VK
Sbjct: 165 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIQAVKGGMTITTQGTALQDGSAGDQVRVK 221
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V + +
Sbjct: 222 NDKSQRIIEGIVTGIAEITI 241
>gi|14581460|gb|AAK31635.1| FlgA [Pseudomonas aeruginosa]
Length = 188
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 60/149 (40%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + VV + VL ++ + ++ + Y
Sbjct: 40 TVRISCEGSAPWTIFMPAQVKLFRQVVVAVQPLKRAHVLEDADIALVERDVGLLTQGYLT 99
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
VVG RR ++ D V+ L + + +G +V I+ + + G ALSD +
Sbjct: 100 DPARVVGQKLRRPVVNDQVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAP 159
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G I V+N+ + ++ V++ GTV V +
Sbjct: 160 GQQIRVRNLRSQRIIKARVIEPGTVEVNM 188
>gi|269965640|ref|ZP_06179753.1| flagellar basal body P-ring biosynthesis protein [Vibrio
alginolyticus 40B]
gi|269829708|gb|EEZ83944.1| flagellar basal body P-ring biosynthesis protein [Vibrio
alginolyticus 40B]
Length = 265
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ +S+ +V + + EV+ +K T S + ++ + VGL T R
Sbjct: 130 RINVTIKSSLTLPVLVATTTVGRNEVVTAKHIKLETRTISR-QDDFYTRPEQAVGLETSR 188
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L V+ S L P +I +G +V +I ++ + ST G+AL D + G I V+N +G
Sbjct: 189 RLRAGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQQIDVENPSSG 248
Query: 135 VMVSGSVVDTGTV 147
++ V V
Sbjct: 249 KVIRAVVTGLNQV 261
>gi|119477961|ref|ZP_01618061.1| flagellar basal body P-ring biosynthesis protein [marine gamma
proteobacterium HTCC2143]
gi|119448874|gb|EAW30116.1| flagellar basal body P-ring biosynthesis protein [marine gamma
proteobacterium HTCC2143]
Length = 237
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+SLY+ +L+ V + I G ++ L+ ++ S + G Y S
Sbjct: 97 KYLWSLYIPVDVNLY----KPVVTAIIPIAKGSIVTRESLEMREMNISKLTGTYFVSSDA 152
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
V+G+ +R L + + + L +P +I RG V + GN+ + GIAL++ G I
Sbjct: 153 VIGMQAKRPLRANAPVIATHLQQPLLIKRGESVVMTARSGNLVVKIPGIALTNGHRGQQI 212
Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151
+++N + +V G V G V +V+
Sbjct: 213 SIRNSQSKRIVEGKVSAQGQVMIVM 237
>gi|126176160|ref|YP_001052309.1| SAF domain-containing protein [Shewanella baltica OS155]
gi|125999365|gb|ABN63440.1| SAF domain [Shewanella baltica OS155]
Length = 245
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+SLYV + +L A + V + + E++ L+ + + + K ++G
Sbjct: 108 WSLYVRAKVALSAYI----PVANKTLVRDEIVTSENLQWKMLPLTASDQDIITDDKHILG 163
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R + + I S L+ P ++S G +V I GIA+ +GD I V+
Sbjct: 164 QAVARKIRKNKPIRASNLNAPELVSIGDEVIIEAASSTFYAHMTGIAMDAGKLGDAIRVR 223
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N +G +++ + G V
Sbjct: 224 NSSSGRIITAYPIAKGRVETR 244
>gi|153213632|ref|ZP_01948905.1| flagellar protein, putative [Vibrio cholerae 1587]
gi|124115831|gb|EAY34651.1| flagellar protein, putative [Vibrio cholerae 1587]
Length = 255
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + + + + ++ G++++ + V R + ++V+G
Sbjct: 121 WRIYVPVRLT----ITIPLITAATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 176
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ + VI + + ++ R V I + M+I+T G A+SD +G+ I VK
Sbjct: 177 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 233
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ V G V V
Sbjct: 234 NDKSNRIIDAQVSGVGEVTV 253
>gi|229522152|ref|ZP_04411569.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
TM 11079-80]
gi|229524198|ref|ZP_04413603.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
bv. albensis VL426]
gi|229337779|gb|EEO02796.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
bv. albensis VL426]
gi|229341077|gb|EEO06082.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
TM 11079-80]
Length = 255
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + + + + ++ G++++ + V R + ++V+G
Sbjct: 121 WRVYVPVRLT----ITIPLITAATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 176
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ + VI + + ++ R V I + M+I+T G A+SD +G+ I VK
Sbjct: 177 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 233
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ V G V V
Sbjct: 234 NDKSNRIIDAQVSGVGEVTV 253
>gi|262394945|ref|YP_003286799.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
Ex25]
gi|262338539|gb|ACY52334.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
Ex25]
Length = 248
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S+ +V + + GE+++ S + + R + + VVG
Sbjct: 114 WKVYVPVRISVSV----PMIVATRTLGRGEIVSASDVTTSMIELQRFRKDGFSNYDQVVG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + V+ + + V+ R KV I MTI+T G AL D + GD + VK
Sbjct: 170 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIKAVNSGMTITTQGTALQDGAAGDQVRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V + V
Sbjct: 227 NDKSQRIIEGIVTGIAEITV 246
>gi|254227979|ref|ZP_04921409.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio
sp. Ex25]
gi|262396039|ref|YP_003287892.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
Ex25]
gi|151939475|gb|EDN58303.1| flagella basal body P-ring formation protein FlgA, putative [Vibrio
sp. Ex25]
gi|262339633|gb|ACY53427.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
Ex25]
Length = 265
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ +S+ +V + + EV+ +K T S + ++ +GL T R
Sbjct: 130 RINVTIKSSLTLPVLVATTTVGRNEVVTAKHVKLETRTISR-QDDFYTRPGQAIGLETSR 188
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L V+ S L P +I +G +V +I ++ + ST G+AL D + G I V+N+ +G
Sbjct: 189 RLRAGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQQIEVENLSSG 248
Query: 135 VMVSGSVVDTGTV 147
++ V V
Sbjct: 249 KVIRAVVTGLNQV 261
>gi|33573139|emb|CAE36786.1| flagella basal body P-ring formation protein [Bordetella
parapertussis]
Length = 291
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 6/151 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ CV +++Y + SV G V + I G+ + + L +
Sbjct: 147 LRCVA-PRTWTVYAQATV----SVPGQYYVAARQIAPGKTIEAADLTTRDGDLVALPPGV 201
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
++G+ + I + L +SRG VRI +S+ G AL +A
Sbjct: 202 ITDAAAILGMRPAHRIAAGQPIKGAGLRSAESVSRGQSVRITARGNGFVVSSEGQALDNA 261
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ V+ +G +VSG V G V + +
Sbjct: 262 PPSATVQVR-TASGQVVSGIVQAAGLVEIQL 291
>gi|253998492|ref|YP_003050555.1| flagella basal body P-ring formation protein FlgA [Methylovorus sp.
SIP3-4]
gi|313200567|ref|YP_004039225.1| flagella basal body p-ring formation protein flga [Methylovorus sp.
MP688]
gi|253985171|gb|ACT50028.1| flagella basal body P-ring formation protein FlgA [Methylovorus sp.
SIP3-4]
gi|312439883|gb|ADQ83989.1| flagella basal body P-ring formation protein FlgA [Methylovorus sp.
MP688]
Length = 242
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+++Y+ + + V+G +V + + G V++ L + + +
Sbjct: 103 APAWTIYMQATVN----VVGQYLVAAAPLAQGRVVDSGDLLFESGDLAQLPPGIFTDPEQ 158
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
+G + + V+ +L V+ +G V +I +IS G AL++A+ G ++
Sbjct: 159 AIGRIVNISMNAGTVLRQEMLKASPVVQQGQTVTLITRGKGFSISAEGHALNNATDGQLV 218
Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
VK + G +VSG + G + V
Sbjct: 219 RVK-VANGQVVSGIARNGGKIEV 240
>gi|15642202|ref|NP_231834.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
cholerae O1 biovar El Tor str. N16961]
gi|121586266|ref|ZP_01676056.1| flagellar protein, putative [Vibrio cholerae 2740-80]
gi|121726549|ref|ZP_01679798.1| flagellar protein, putative [Vibrio cholerae V52]
gi|147674697|ref|YP_001217720.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
cholerae O395]
gi|153817121|ref|ZP_01969788.1| flagellar protein, putative [Vibrio cholerae NCTC 8457]
gi|153820832|ref|ZP_01973499.1| flagellar protein, putative [Vibrio cholerae B33]
gi|153825364|ref|ZP_01978031.1| flagellar protein, putative [Vibrio cholerae MZO-2]
gi|153829335|ref|ZP_01982002.1| putative flagellar protein [Vibrio cholerae 623-39]
gi|183179559|ref|ZP_02957770.1| flagellar protein, putative [Vibrio cholerae MZO-3]
gi|227082327|ref|YP_002810878.1| flagellar protein, putative [Vibrio cholerae M66-2]
gi|229507720|ref|ZP_04397225.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
BX 330286]
gi|229512085|ref|ZP_04401564.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
B33]
gi|229513847|ref|ZP_04403309.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
TMA 21]
gi|229519220|ref|ZP_04408663.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
RC9]
gi|229528792|ref|ZP_04418182.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
12129(1)]
gi|229607224|ref|YP_002877872.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
cholerae MJ-1236]
gi|254225797|ref|ZP_04919402.1| flagellar protein, putative [Vibrio cholerae V51]
gi|254286488|ref|ZP_04961445.1| flagellar protein, putative [Vibrio cholerae AM-19226]
gi|254849332|ref|ZP_05238682.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
cholerae MO10]
gi|298500419|ref|ZP_07010224.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
cholerae MAK 757]
gi|9656759|gb|AAF95348.1| flagellar protein, putative [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121549532|gb|EAX59558.1| flagellar protein, putative [Vibrio cholerae 2740-80]
gi|121631002|gb|EAX63381.1| flagellar protein, putative [Vibrio cholerae V52]
gi|125621703|gb|EAZ50032.1| flagellar protein, putative [Vibrio cholerae V51]
gi|126512389|gb|EAZ74983.1| flagellar protein, putative [Vibrio cholerae NCTC 8457]
gi|126521624|gb|EAZ78847.1| flagellar protein, putative [Vibrio cholerae B33]
gi|146316580|gb|ABQ21119.1| putative flagellar protein [Vibrio cholerae O395]
gi|148875176|gb|EDL73311.1| putative flagellar protein [Vibrio cholerae 623-39]
gi|149741048|gb|EDM55117.1| flagellar protein, putative [Vibrio cholerae MZO-2]
gi|150423437|gb|EDN15381.1| flagellar protein, putative [Vibrio cholerae AM-19226]
gi|183012970|gb|EDT88270.1| flagellar protein, putative [Vibrio cholerae MZO-3]
gi|227010215|gb|ACP06427.1| flagellar protein, putative [Vibrio cholerae M66-2]
gi|227014099|gb|ACP10309.1| flagellar protein, putative [Vibrio cholerae O395]
gi|229332566|gb|EEN98052.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
12129(1)]
gi|229343909|gb|EEO08884.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
RC9]
gi|229349028|gb|EEO13985.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
TMA 21]
gi|229352050|gb|EEO16991.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
B33]
gi|229355225|gb|EEO20146.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
BX 330286]
gi|229369879|gb|ACQ60302.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
MJ-1236]
gi|254845037|gb|EET23451.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
cholerae MO10]
gi|297541112|gb|EFH77166.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
cholerae MAK 757]
Length = 255
Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + + + + ++ G++++ + V R + ++V+G
Sbjct: 121 WRVYVPVRLT----ITIPLITAATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 176
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ + VI + + ++ R V I + M+I+T G A+SD +G+ I VK
Sbjct: 177 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 233
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ V G V V
Sbjct: 234 NDKSNRIIDAQVSGVGEVTV 253
>gi|254516984|ref|ZP_05129042.1| SAF domain protein [gamma proteobacterium NOR5-3]
gi|219674489|gb|EED30857.1| SAF domain protein [gamma proteobacterium NOR5-3]
Length = 252
Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ ++LY+ + S + V + G +L L+ + ++ + +
Sbjct: 113 SVPWTLYLRAEVSASLEL----PVLVNALPRGTILAPGDLEMVTRRITSQANDIIVDPQM 168
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
G+ +R L + + P ++SRG V +I + + G A+ + GD +
Sbjct: 169 AAGMELKRPLAAGSTLRHGHVDLPELVSRGQMVTLIAGGAGVEVRMQGKAMGSGAEGDRL 228
Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
V N+ +G V G V+ G++R+
Sbjct: 229 LVTNLASGRRVEGLVLSDGSIRI 251
>gi|238758114|ref|ZP_04619294.1| Flagella basal body P-ring formation protein flgA [Yersinia aldovae
ATCC 35236]
gi|238703652|gb|EEP96189.1| Flagella basal body P-ring formation protein flgA [Yersinia aldovae
ATCC 35236]
Length = 226
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
V G V + + AGE ++ ++ Q + G V+ R +
Sbjct: 93 FIQTQVQVSGRYAVATRRLAAGEKISMPDIEMKQGRLDTLPPGALLDTHFAQGAVSLRQI 152
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ ++L R +VI G V+I+ I++ G A+++A++ D + V+ + +G +
Sbjct: 153 NAGQPLTRNMLRRLWVIKAGQDVQILAQGEGFNINSTGKAMNNAAVQDSVRVR-MASGQI 211
Query: 137 VSGSVVDTGTVRVVV 151
VSG+V D GT+++++
Sbjct: 212 VSGTVADNGTIQIML 226
>gi|153839087|ref|ZP_01991754.1| flagellar basal body P-ring biosynthesis protein [Vibrio
parahaemolyticus AQ3810]
gi|149747425|gb|EDM58385.1| flagellar basal body P-ring biosynthesis protein [Vibrio
parahaemolyticus AQ3810]
Length = 248
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S +V + + GE+++ S + + R + S + VVG
Sbjct: 114 WKVYVPVRVSSSV----PMIVATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + V+ + + V+ R KV I + MTI+T G AL D + GD + VK
Sbjct: 170 AKLKRSVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V D + +
Sbjct: 227 NDKSQRIIEGIVTDIAEITI 246
>gi|269961593|ref|ZP_06175955.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833634|gb|EEZ87731.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 248
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S +V + + GE+++ S + + R + ++ V+G
Sbjct: 114 WKVYVPVRISASV----PMIVSTRQLGRGEIISASDVTTSMIELQRFRKDGFSNMDQVIG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + V+ + + V+ R KV I + MTI+T G AL D S GD + VK
Sbjct: 170 SKLKRNVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGSAGDQVRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V + +
Sbjct: 227 NDKSQRIIEGIVTGIAEITI 246
>gi|28897546|ref|NP_797151.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
parahaemolyticus RIMD 2210633]
gi|308094616|ref|ZP_05890645.2| flagella basal body P-ring formation protein FlgA [Vibrio
parahaemolyticus AN-5034]
gi|308125762|ref|ZP_05777207.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
parahaemolyticus K5030]
gi|308126465|ref|ZP_05910342.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
parahaemolyticus AQ4037]
gi|5361002|gb|AAD42909.1|U12817_3 polar flagellar FlgA homolog [Vibrio parahaemolyticus]
gi|28805758|dbj|BAC59035.1| polar flagellar FlgA [Vibrio parahaemolyticus RIMD 2210633]
gi|308090165|gb|EFO39860.1| flagella basal body P-ring formation protein FlgA [Vibrio
parahaemolyticus AN-5034]
gi|308106761|gb|EFO44301.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
parahaemolyticus AQ4037]
gi|308115098|gb|EFO52638.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
parahaemolyticus K5030]
Length = 248
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S +V + + GE+++ S + + R + S + VVG
Sbjct: 114 WKVYVPVRVSSSV----PMIVATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + V+ + + V+ R KV I + MTI+T G AL D + GD + VK
Sbjct: 170 AKLKRSVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V D + V
Sbjct: 227 NDKSQRIIEGIVTDIAEITV 246
>gi|292489137|ref|YP_003532024.1| flagella basal body P-ring formation protein FlgA [Erwinia
amylovora CFBP1430]
gi|292900256|ref|YP_003539625.1| flagella basal body P-ring formation protein [Erwinia amylovora
ATCC 49946]
gi|291200104|emb|CBJ47230.1| flagella basal body P-ring formation protein [Erwinia amylovora
ATCC 49946]
gi|291554571|emb|CBA22188.1| Flagella basal body P-ring formation protein flgA precursor
[Erwinia amylovora CFBP1430]
gi|312173295|emb|CBX81550.1| Flagella basal body P-ring formation protein flgA precursor
[Erwinia amylovora ATCC BAA-2158]
Length = 234
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 1/148 (0%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
R ++ + S G V + AG V+ ++ + + I
Sbjct: 87 RSVIAQCGARRHYLQIQISAHGSWWVAKKNLPAGSVIRADDIETHAGSLDHQPAGILFDI 146
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
+VG T R L I + L + +++ G V I+ I + G AL++AS+ D
Sbjct: 147 NQIVGQTTTRALNAGSPIVQNQLRQQWLLHAGQMVDIVTHGEGFRIRSQGKALANASVDD 206
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
+ V+ + TG +SG V G V ++++
Sbjct: 207 TLKVQ-MRTGRTISGKVAHDGQVEILLQ 233
>gi|222053733|ref|YP_002536095.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
FRC-32]
gi|221563022|gb|ACM18994.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
FRC-32]
Length = 226
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 63/142 (44%)
Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
+ + + + VV + GEV++ + + + S ++G + + +V
Sbjct: 83 VDGRVERNVPVKVEVEAMAEMVVAVRPLERGEVIDAADVAVQKRGLSRLQGRFVRDVDEV 142
Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
VG R + ++ I L R +I G V I+ ++ I+ AG A + + GD +
Sbjct: 143 VGKRVRTAIRGNNPIRPDFLERVPLIKSGQLVTIVAENESLRITAAGKARNSGAEGDTVM 202
Query: 128 VKNIDTGVMVSGSVVDTGTVRV 149
V+N+ + + V+D TV+V
Sbjct: 203 VRNLASQKELPARVIDAETVKV 224
>gi|120598226|ref|YP_962800.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
sp. W3-18-1]
gi|146293696|ref|YP_001184120.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
putrefaciens CN-32]
gi|120558319|gb|ABM24246.1| SAF domain [Shewanella sp. W3-18-1]
gi|145565386|gb|ABP76321.1| SAF domain [Shewanella putrefaciens CN-32]
gi|319427095|gb|ADV55169.1| flagella basal body P-ring formation protein FlgA [Shewanella
putrefaciens 200]
Length = 235
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 63/149 (42%), Gaps = 7/149 (4%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
+ +++ ++ VV + ++ G+ +N S+++ + +++RG
Sbjct: 94 TPELAYPWQIFISVRV----DILFPVVVTTEILAPGDRINASQIEVRYIEQNSLRGQQFD 149
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ G +R + + I + L + + + I + + + TAG AL D +I
Sbjct: 150 DPSQLEGTRVKRRIAKESPIFANNL---CFVCKNDAISIYVRSPSFMLKTAGEALQDGNI 206
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+ I VKN + + V+ G V V +
Sbjct: 207 GEQIRVKNSSSNKQLDAIVIGIGEVEVRM 235
>gi|238785501|ref|ZP_04629484.1| Flagella basal body P-ring formation protein flgA [Yersinia
bercovieri ATCC 43970]
gi|238713603|gb|EEQ05632.1| Flagella basal body P-ring formation protein flgA [Yersinia
bercovieri ATCC 43970]
Length = 234
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V V G VV + + AG + ++ Q + G V+
Sbjct: 98 VRRFIQTQVQVSGRYVVATRQLAAGAKITAQDVEMKQGRLDTLPPGALLEPHFAQGAVSL 157
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R ++I G V+++ +++ G A+++A+I D + V+ + +
Sbjct: 158 RQINAGQPLTRNMLRRLWIIKSGQDVQVLAQGEGFNVNSYGKAMNNAAIQDNLRVR-MAS 216
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG V + GT+R+++
Sbjct: 217 GQIVSGVVGEDGTIRIML 234
>gi|114320051|ref|YP_741734.1| flageller protein FlgA [Alkalilimnicola ehrlichii MLHE-1]
gi|114226445|gb|ABI56244.1| flagellar protein FlgA [Alkalilimnicola ehrlichii MLHE-1]
Length = 238
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 4/140 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++YV + +V + + GE L + + +++ Y + ++G
Sbjct: 101 WTVYVSARVDTQV----EVLVAARPLRRGERLRADSVTTERRQLASLHRPYETEAEHLIG 156
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
RR L +I + L P ++ RG V + G + ++ G AL +GD++ V+
Sbjct: 157 KELRRSLRRGDLIAGNALAAPQLVQRGRSVTLRAGGGRVQVTGQGKALESGVLGDIVRVE 216
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+G +V G V V V
Sbjct: 217 AGSSGRVVEGRVAGESLVEV 236
>gi|54307266|ref|YP_128286.1| hypothetical protein PBPRA0029 [Photobacterium profundum SS9]
gi|46911686|emb|CAG18484.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 253
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 58/136 (42%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
Y + ++ VV + +N + + L + + +R Y S + + GL +
Sbjct: 115 YWKARAKAEVAIYRQLVVAKMTLNRHQEITPLMLSMKRSNVAYLRHGYFTSKQALTGLTS 174
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
RR ++ +I ++ +P ++ R V I G M + G+AL GD I V+N+
Sbjct: 175 RRKIVAGKIISPRMVEQPKLVQRNDGVLIEAKFGKMNATMKGVALESGVKGDSIRVRNLS 234
Query: 133 TGVMVSGSVVDTGTVR 148
+ + +V VR
Sbjct: 235 SQKEIYAIIVGPQKVR 250
>gi|120554102|ref|YP_958453.1| SAF domain-containing protein [Marinobacter aquaeolei VT8]
gi|120323951|gb|ABM18266.1| SAF domain [Marinobacter aquaeolei VT8]
Length = 235
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + + G A++ + + GE L + V + R + V G
Sbjct: 98 WRMYVTTSVEVH----GPALIAARPLARGERLTPDLVTVNSVQINASRRGVLTRKESVSG 153
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ RR + V+ +L P I RG V I G+ ++S+ G AL+ A +G+ + V+
Sbjct: 154 MMMRRPVNAGTVMTPDLLEAPNAIERGDHVIITARSGSFSVSSRGKALASAGVGEQVLVE 213
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N+ + V V G V + +
Sbjct: 214 NLRSSRTVKARAVGPGRVEIPM 235
>gi|291085839|ref|ZP_06354200.2| putative flagellar protein [Citrobacter youngae ATCC 29220]
gi|291070006|gb|EFE08115.1| putative flagellar protein [Citrobacter youngae ATCC 29220]
Length = 260
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
S ++ V V+P +I V+ L+ + SN R ++ +
Sbjct: 114 SCPGSNGWQFNVAVRPDVSIPVVMPKSLIARDTVITADDLQLKKFNISNQREGLMTNMDE 173
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
+GL ++R L P I S L P ++ R V I+ +T S G+AL + G+VI
Sbjct: 174 AIGLTSKRALQPGKPITRSELVLPVLVKRDQPVMIVSHMAGITASMPGVALKNGRKGEVI 233
Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151
++N + ++SG V DTG V +
Sbjct: 234 KIRNSSSQRIISGVVDDTGVVTTLA 258
>gi|172061976|ref|YP_001809628.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
ambifaria MC40-6]
gi|171994493|gb|ACB65412.1| flagella basal body P-ring formation protein FlgA [Burkholderia
ambifaria MC40-6]
Length = 418
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + VG
Sbjct: 282 WTVYLQAKVAVQA----TYYVAARQIAPGEPLTAADLVARDGDLTVLPLAVITDPAQAVG 337
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G AL++A+ G I V+
Sbjct: 338 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSIRVR 397
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 398 -MAAGQIVTAIVKDAGTVEI 416
>gi|330447899|ref|ZP_08311547.1| flagella basal body P-ring formation protein FlgA [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328492090|dbj|GAA06044.1| flagella basal body P-ring formation protein FlgA [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 312
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+++ + +V IN E++ L + + S VG T R
Sbjct: 177 QFNATIYVEITLPVLVAKTQINRNEMITSDMLSHQSIRLKS-PKAIVTSTDQTVGSYTSR 235
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ +I ++L +P++I++G +V I+ +G ST GIAL + + I +KN ++
Sbjct: 236 RVRQGQLITENLLKKPFLINKGDEVLIVAKRGEFEASTKGIALEHGKLNEQIKIKNKNSH 295
Query: 135 VMVSGSVVDTGTVRVV 150
++SG + G V +
Sbjct: 296 KVISGIIFAQGKVETI 311
>gi|83858807|ref|ZP_00952329.1| hypothetical protein OA2633_04871 [Oceanicaulis alexandrii
HTCC2633]
gi|83853630|gb|EAP91482.1| hypothetical protein OA2633_04871 [Oceanicaulis alexandrii
HTCC2633]
Length = 315
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 55/136 (40%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
S A + V + I G+ + + + +++ + +RG + +VG+ RR
Sbjct: 169 PLTVSGRAQRVADVPVLNRTIARGDTITAADVDWVRLPENQVRGEIILAETGLVGMTARR 228
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L D + + P V+ RG V ++ G +T+S AL + G I N+ +
Sbjct: 229 ALTADRPVRSYDVEPPVVVERGELVSLVYQVGPLTLSAQARALENGGEGQFIRFVNLQSN 288
Query: 135 VMVSGSVVDTGTVRVV 150
V V G V+
Sbjct: 289 RTVEAWVEGPGRASVL 304
>gi|91224203|ref|ZP_01259466.1| flagellar basal body P-ring biosynthesis protein A [Vibrio
alginolyticus 12G01]
gi|91191114|gb|EAS77380.1| flagellar basal body P-ring biosynthesis protein A [Vibrio
alginolyticus 12G01]
Length = 236
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ +S+ +V + + EV+ +K T S + ++ + VGL T R
Sbjct: 101 RINVTIKSSLTLPVLVATTTVGRNEVVTAKHIKLETRTISR-QDDFYTRPEQAVGLETSR 159
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L V+ S L P +I +G +V +I ++ + ST G+AL D + G I V+N +G
Sbjct: 160 RLRAGQVVNPSNLSAPPLIEKGNEVIVIASKNGFSASTKGVALEDGAKGQQIDVENPSSG 219
Query: 135 VMVSGSVVDTGTV 147
++ V V
Sbjct: 220 KVIRAVVTGLNQV 232
>gi|308050028|ref|YP_003913594.1| flagella basal body P-ring formation protein FlgA [Ferrimonas
balearica DSM 9799]
gi|307632218|gb|ADN76520.1| flagella basal body P-ring formation protein FlgA [Ferrimonas
balearica DSM 9799]
Length = 252
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 4/141 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ Y+ + S A + V + G + S L + ++ + +VG
Sbjct: 115 WRYYIRARVSAVAEL----PVARHRLGRGHTIQASDLTLAKRELGVTSQDWVFARDALVG 170
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
RR + D I S + P +S G +V I G + G+AL S G + V+
Sbjct: 171 QSVRRAIRADKPIRHSQVTAPNWVSLGQEVLIEAAGGGFSAVMKGVALDAGSEGQPVRVR 230
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N+ +G +++ V G V+
Sbjct: 231 NLSSGQVITAYPVAPGKVQTR 251
>gi|157961165|ref|YP_001501199.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
pealeana ATCC 700345]
gi|157846165|gb|ABV86664.1| SAF domain protein [Shewanella pealeana ATCC 700345]
Length = 257
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ + +++ ++ VV + G++L ++ + SN+RG
Sbjct: 115 NSPDLSYPWQIFLSVRV----DILYPIVVAKSTMGPGDLLARGDIEIEYIEQSNLRGQQF 170
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
I VVG +R + P I + L ++ +G V I N I T G AL D +
Sbjct: 171 EEISQVVGARLKRRVAPGQPIFANQL---CIVCKGDSVSIYARSENFEIKTVGEALHDGN 227
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+GD I +KN + + V G V V +
Sbjct: 228 VGDKIRIKNSHSHKKLDARVTGVGQVEVRM 257
>gi|307823527|ref|ZP_07653756.1| flagella basal body P-ring formation protein FlgA [Methylobacter
tundripaludum SV96]
gi|307735512|gb|EFO06360.1| flagella basal body P-ring formation protein FlgA [Methylobacter
tundripaludum SV96]
Length = 232
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+S++ + + VV S I GE++ L + S +R ++ ++ V
Sbjct: 95 WSIFTSVIIKTYQM----VVVLSQPIRRGEIITRQHLAIEKREVSKLREDFVIQMEQVEN 150
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R L ++ L + P +I RG KV I T+ + +I G+A+ D + G +I+VK
Sbjct: 151 KQVTRQLDAGTILSLRNIAEPKLIKRGDKVVISTTKSDFSIKMNGVAMMDGTKGQLISVK 210
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N ++G +++ +V++ G V V
Sbjct: 211 NQNSGRIINATVIEPGLVSV 230
>gi|304412512|ref|ZP_07394118.1| flagella basal body P-ring formation protein FlgA [Shewanella
baltica OS183]
gi|307307171|ref|ZP_07586909.1| flagella basal body P-ring formation protein FlgA [Shewanella
baltica BA175]
gi|304349154|gb|EFM13566.1| flagella basal body P-ring formation protein FlgA [Shewanella
baltica OS183]
gi|306910410|gb|EFN40841.1| flagella basal body P-ring formation protein FlgA [Shewanella
baltica BA175]
Length = 245
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+SLYV + +L A + V + + E++ L+ + + + K ++G
Sbjct: 108 WSLYVRAKVALSAYI----PVANKTLVRDEIVTSENLQWKMLPLTASDQDIITDDKHILG 163
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R + + I S L+ P ++S G +V I GIA+ GD I V+
Sbjct: 164 QAVARKIRKNKPIRASNLNAPELVSIGDEVIIEAASSTFYAHMTGIAMDAGKQGDAIRVR 223
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N +G +++ + G V
Sbjct: 224 NSSSGRIITAYPIAKGRVETR 244
>gi|88811797|ref|ZP_01127051.1| Flageller protein FlgA [Nitrococcus mobilis Nb-231]
gi|88791188|gb|EAR22301.1| Flageller protein FlgA [Nitrococcus mobilis Nb-231]
Length = 244
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ LYV + ++ + + G L+ ++ + +++ G + ++G
Sbjct: 107 WRLYVPVRITQHV----EVLIAARPLPRGIALSADAIRHGRRDPTDLSGAWYTEPSQLLG 162
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
L TRR + V+ +L +I RG ++ + T G+MT++ G AL D GD++ V+
Sbjct: 163 LETRRAIRAGEVLSPQLLSSARLIRRGQELVLFATSGSMTVTVKGKALEDGVEGDIVRVR 222
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N+ + +V G VV T V+V +
Sbjct: 223 NLSSNRVVEGRVVGTDKVQVSL 244
>gi|315127359|ref|YP_004069362.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring
[Pseudoalteromonas sp. SM9913]
gi|315015873|gb|ADT69211.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring
[Pseudoalteromonas sp. SM9913]
Length = 213
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++ YV + VV + + GEV+ S L IR Y ++G
Sbjct: 79 WAQYVHVRIT----ESAPVVVATTNLARGEVITPSHLSIDMRPAHFIRAQYLEDPTALIG 134
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++R + + L+ + ++ +G V I + + T GIAL D ++G+ + V+
Sbjct: 135 SRSKRNIREGMPVLLNQI---CMVCKGDSVTIYANIKGLRVKTTGIALEDGTLGEQVRVE 191
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N TG +++ V +V+V
Sbjct: 192 NKKTGKVLNARVDGVESVQV 211
>gi|307731367|ref|YP_003908591.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
CCGE1003]
gi|307585902|gb|ADN59300.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
CCGE1003]
Length = 543
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + SL A + + ++AGEVL + L + + + VG
Sbjct: 407 WTIYLQARISLHA----TYYLAARAMSAGEVLTAADLVAREGDLTGLPQAIVTDPSQAVG 462
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+T + P + +L +S G V+++ IS+ G A+++AS G + VK
Sbjct: 463 SLTLTRVSPGMPLRRDMLRSASAVSIGQTVKVVAAGDGFAISSEGSAMNNASPGQQVRVK 522
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
G ++SG V D TV + +
Sbjct: 523 -TANGQIISGIVKDGSTVEIQL 543
>gi|330961187|gb|EGH61447.1| flagellar basal body P-ring biosynthesis protein FlgA [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 192
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 61/149 (40%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR S + + V + ++ E + + S++ +
Sbjct: 44 TVRVRCEGSSPWTVFVPAQVQLFRNVVTVVRPLKRDAIVTEEDVAMRERDVSSLGQGFLA 103
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S+ VG R ++ D VI L +P +I +G +V II G + + G A+SD
Sbjct: 104 SLDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARTGTLAVRMPGEAMSDGGF 163
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I VKN+++ ++ +V G V V +
Sbjct: 164 NEQIRVKNLNSQRVIKANVTGPGQVEVAM 192
>gi|254508440|ref|ZP_05120560.1| flagellar basal body P-ring biosynthesis protein [Vibrio
parahaemolyticus 16]
gi|219548650|gb|EED25655.1| flagellar basal body P-ring biosynthesis protein [Vibrio
parahaemolyticus 16]
Length = 248
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + G V + ++ G+++ + + V R ++ V+G
Sbjct: 114 WRVYVPVRLT----RTGPQVTLTTPLSRGQIIASTDVTISMVDLQRYRRQGFSTLDAVIG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
T++ L VI + + V+ R V I + M I+T G+AL+D S G+ I VK
Sbjct: 170 AKTKKNLRSGEVIEENDI---CVVCRNETVTIKAVKSGMVITTKGVALTDGSHGEQIRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N + ++ G V V VV
Sbjct: 227 NSKSNRIIEGRVTGISEVTVV 247
>gi|186477693|ref|YP_001859163.1| flagella basal body P-ring formation protein FlgA [Burkholderia
phymatum STM815]
gi|184194152|gb|ACC72117.1| flagella basal body P-ring formation protein FlgA [Burkholderia
phymatum STM815]
Length = 424
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 5/142 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++LY+ + S+ A V + I GE+L+ S L + + VVG
Sbjct: 288 WTLYLQAKVSIHA----TYFVAARSIAPGELLSSSDLVARDGDLTVLPQAVITDASQVVG 343
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
V + P + +L +S G V+++ IS G A+++AS G + V+
Sbjct: 344 SVALMRVSPGLPLRRDMLKSAEAVSIGQSVKVVAQGPGFAISAEGSAMNNASPGQPVKVR 403
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
G ++ G V D GTV + +
Sbjct: 404 -TANGQIIQGVVKDAGTVEIQL 424
>gi|119899031|ref|YP_934244.1| chaperon for flagellar basal body P-ring formation [Azoarcus sp.
BH72]
gi|119671444|emb|CAL95357.1| chaperon for flagellar basal body P-ring formation [Azoarcus sp.
BH72]
Length = 256
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ ++ Y+ + SV+G +V + + AG+++ + L + + N +
Sbjct: 117 PVEWTAYLQARV----SVLGEYLVTAQPLRAGQIIGPADLVRRDGDLATLPDNTLTDVAQ 172
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
G TR + + +L P + +G V+++ +S+ G+AL++ + GD +
Sbjct: 173 ASGQYTRFAIAQGSPLRADMLRIPPAVRQGQTVQVVTVGSGFRVSSEGVALNNGAPGDPV 232
Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVV 151
V+ + G +V+G+ G V V
Sbjct: 233 RVR-LGGGQVVTGAARAGGVVEVTP 256
>gi|94987184|ref|YP_595117.1| hypothetical protein LI0742 [Lawsonia intracellularis PHE/MN1-00]
gi|94731433|emb|CAJ54796.1| hypothetical protein LI0742 [Lawsonia intracellularis PHE/MN1-00]
Length = 327
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 59/144 (40%), Gaps = 2/144 (1%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ ++ ++ SV +N G+ +N + + + +R +
Sbjct: 186 DIDGTVLRQYTGTVLLSVWQPVPSVGKPLNRGDYVNPEDVTWINKNIAFLRDDIWDGKGG 245
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
+R + I S L V+ +G +++ +G++ +S AL + + G I
Sbjct: 246 P--WQIKRSIGIGQPIYQSDLEPLAVVRKGDIIKLNYNKGSIRLSVNVEALENGTHGSFI 303
Query: 127 AVKNIDTGVMVSGSVVDTGTVRVV 150
V+N+ + +V +VVD+ TV +
Sbjct: 304 QVRNLQSKKIVHATVVDSNTVEIR 327
>gi|167623355|ref|YP_001673649.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
halifaxensis HAW-EB4]
gi|167353377|gb|ABZ75990.1| SAF domain protein [Shewanella halifaxensis HAW-EB4]
Length = 257
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ + ++V ++ VV + G++L+ ++ + + +RG+
Sbjct: 115 NSPDLSYPWQMFVSVRV----DILYPVVVAKSTMGPGDLLSRGDIELEYIEQTTLRGHQF 170
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
I +VVG +R + P I + L ++ +G V I N I T G AL DA+
Sbjct: 171 EEISEVVGARLKRRVAPGQPIFANQL---CIVCKGDSVSIYARSENFEIKTVGEALHDAN 227
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+GD + +KN + + V G V V +
Sbjct: 228 VGDKVRIKNSHSHKNLDARVTGVGQVEVRM 257
>gi|156976137|ref|YP_001447043.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
harveyi ATCC BAA-1116]
gi|156527731|gb|ABU72816.1| hypothetical protein VIBHAR_04908 [Vibrio harveyi ATCC BAA-1116]
Length = 265
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ ++V +V + I E ++ S LK T S + ++ +GL T R
Sbjct: 130 RINVTIKSAVTLPVLVATSTIGRNESISASNLKTETRTISR-QDDFFTKANQAIGLETTR 188
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ +I + L P +I +G +V II ++ + ST G+AL G I V+NI +G
Sbjct: 189 RIRAGQIIDPTNLSSPPLIEKGNEVIIIASKDGFSASTKGVALEQGKKGQQIEVENISSG 248
Query: 135 VMVSGSVVDTGTV 147
++ V V
Sbjct: 249 KVIRAVVTGLNQV 261
>gi|88799014|ref|ZP_01114595.1| flagellar basal body P-ring biosynthesis protein [Reinekea sp.
MED297]
gi|88778241|gb|EAR09435.1| flagellar basal body P-ring biosynthesis protein [Reinekea sp.
MED297]
Length = 268
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 4/140 (2%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+ Y+ +F V+ + ++ + +L+ + ++R Y +
Sbjct: 127 AWQAYLPIAVQIF----KPVVIAARPLDRNNNVAVGQLRLQRRDIGDLRQGYFLEAAKIE 182
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G RR + VI ++ P +I+RG V +I +G +T++T G AL D ++G+ I V
Sbjct: 183 GYALRRTVKAGQVITPYMVEAPSLIARGDWVTVISGRGALTVTTTGEALKDGALGEQIPV 242
Query: 129 KNIDTGVMVSGSVVDTGTVR 148
+N+ + V V+ G V
Sbjct: 243 RNLSSDETVRAWVIRKGVVS 262
>gi|269960112|ref|ZP_06174488.1| Flagellar protein flgA precursor [Vibrio harveyi 1DA3]
gi|269835083|gb|EEZ89166.1| Flagellar protein flgA precursor [Vibrio harveyi 1DA3]
Length = 265
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ ++V +V + I+ + L+ S LK T S + ++ +GL T R
Sbjct: 130 RINVTIKSAVTLPVLVATSTIDRNDTLSASNLKSETRTISR-QDDFYTKANQAIGLETTR 188
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ +I + L P +I +G +V II ++G + ST G+AL G I V+N +G
Sbjct: 189 RIRAGQIIDPTNLSSPPLIEKGNEVIIIASKGGFSASTKGVALEQGKKGQQIEVENTSSG 248
Query: 135 VMVSGSVVDTGTV 147
++ V V
Sbjct: 249 KVIRAVVTGLNQV 261
>gi|297182935|gb|ADI19084.1| flagellar basal body p-ring biosynthesis protein [uncultured delta
proteobacterium HF0070_15B21]
Length = 357
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 67/146 (45%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ F + + + V+ I A V+ E+ + +++ + Y
Sbjct: 211 LEFSVDGKPMRKVPVRTYIKLYKDVVIAKDTIKADHVIGEADILKVRRNVDRMPSKYVTD 270
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+D++G V R + P+ VI + + V+ G ++ I+ N+ ++ G++L ++G
Sbjct: 271 AQDILGKVASRAINPNEVIRETTVAAQPVVKSGDRLMIVFETQNLRLTAPGMSLQKGALG 330
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
D I V+N+ + ++V +V D V+V
Sbjct: 331 DRIQVRNLQSKILVYATVRDKNHVQV 356
>gi|209884525|ref|YP_002288382.1| flageller protein FlgA [Oligotropha carboxidovorans OM5]
gi|209872721|gb|ACI92517.1| flageller protein FlgA [Oligotropha carboxidovorans OM5]
Length = 351
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 65/157 (41%), Gaps = 8/157 (5%)
Query: 2 DCVRFLLFFSLY-------VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS 54
RF + F + + FA A V I E++ S L + +
Sbjct: 169 RSRRFDVLFDIASDTSSTPAKLRFTGFAVETVQAAVLMRPIGRNEIIKASDLNVERRPKA 228
Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
+ G+ ++ +G+ TRR + + S L + +++R + ++ + +++ G
Sbjct: 229 EVGGDAIP-LEQAIGMQTRRAMRIGDALRSSDLAKADLVTRDQTISLVYETPGLYLTSRG 287
Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
AL + GD ++V N+ + V G VV G V ++
Sbjct: 288 KALEAGTKGDTVSVLNLQSKRTVQGIVVGPGQVAIIA 324
>gi|330830309|ref|YP_004393261.1| flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas
veronii B565]
gi|328805445|gb|AEB50644.1| Flagellar basal body P-ring biosynthesis protein FlgA [Aeromonas
veronii B565]
Length = 227
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +Y+ S+ V + I G++L+ES+L + IRG+Y +VG
Sbjct: 93 WDVYLPVRV----SIQKPYVTVANPIAKGDLLSESQLALAYQDQTLIRGDYLADTAPLVG 148
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ ++R L P I LS + V+ +G +V + N I T AL D S G++I +
Sbjct: 149 VRSKRELKPGQPIRLSQV---CVVCKGDQVTLTAENSNFQIKTMARALQDGSFGEIIKLV 205
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
NI +G V G V G V V
Sbjct: 206 NIRSGKTVEGKVSAVGAVSV 225
>gi|262276423|ref|ZP_06054232.1| flagellar basal-body P-ring formation protein FlgA [Grimontia
hollisae CIP 101886]
gi|262220231|gb|EEY71547.1| flagellar basal-body P-ring formation protein FlgA [Grimontia
hollisae CIP 101886]
Length = 232
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV L + VV ++ G + + L V RG ++G
Sbjct: 98 WQVYVPVQIRL----LTPVVVAKRPLDRGVTIAKEDLIIQLVDARFQRGQTYTDNATLLG 153
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+RV+ I + + ++ R +V I + I G ALSD ++G+ I V+
Sbjct: 154 SRVKRVVGIGEPISGNDI---CMVCRNDEVIITAAGNGLNIIAKGTALSDGALGEQIKVR 210
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + +V G++ G V V
Sbjct: 211 NTKSNRIVDGTITAVGQVIV 230
>gi|325291938|ref|YP_004277802.1| flagellar basal body P-ring biosynthesis protein FlgA
[Agrobacterium sp. H13-3]
gi|325059791|gb|ADY63482.1| flagellar basal body P-ring biosynthesis protein FlgA
[Agrobacterium sp. H13-3]
Length = 162
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
VR L + + ++ FA A+VP+ I GE + ++K ++VTN NI YA
Sbjct: 15 VRMCLASAFSLGAMAPAFAQAP-TALVPTRTIYPGETITPEQVKPVEVTNPNISAGYASD 73
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
I +V G+++++ LLP IP++ L P ++ RG V+++ GNMT+ +G +SD S+G
Sbjct: 74 ISEVEGMISKQTLLPGRTIPIAALREPSLVVRGTSVKLVFHIGNMTLMASGTPMSDGSLG 133
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
+V+ V+NID+GVMVSG+V+ GT++V+ K
Sbjct: 134 EVVRVRNIDSGVMVSGTVMKDGTIQVMAK 162
>gi|219681696|ref|YP_002468082.1| flagella basal-body P-ring formation protein FlgA precursor
[Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
gi|219682251|ref|YP_002468635.1| flagella basal-body P-ring formation protein FlgA precursor
[Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|219621984|gb|ACL30140.1| flagella basal-body P-ring formation protein FlgA precursor
[Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|219624539|gb|ACL30694.1| flagella basal-body P-ring formation protein FlgA precursor
[Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
gi|311087230|gb|ADP67310.1| flagella basal-body P-ring formation protein FlgA precursor
[Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)]
gi|311087749|gb|ADP67828.1| flagella basal-body P-ring formation protein FlgA precursor
[Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)]
Length = 226
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ G +V + I G + ES LK + + N KDVV ++ R
Sbjct: 94 LTVEVQSEGEYIVANRKIPRGTRIKESDLKILIGRLDVLPNNTYRKKKDVVNRISLRDFF 153
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I + +++ +V +I+ N +S+ +LS+ + I VK ++G ++
Sbjct: 154 PLQPITSFMTRPFWLVKVNQQVTVIINGNNFKMSSKAKSLSNGAQNQNIRVK-TNSGKII 212
Query: 138 SGSVVDTGTVRVVV 151
+G + + G V V
Sbjct: 213 NGIINENGEVIVSP 226
>gi|114570498|ref|YP_757178.1| flagellar basal body P-ring biosynthesis protein FlgA [Maricaulis
maris MCS10]
gi|114340960|gb|ABI66240.1| flagellar protein FlgA [Maricaulis maris MCS10]
Length = 314
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 57/135 (42%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ A V + + +G+ + S + + + +R + + ++G+ TRR
Sbjct: 172 PVRVTGRAYATVELPVLARPVASGQEITASDITWISHRSDRLRPDAILDPEALIGMETRR 231
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L P+ + L RP ++ RG V ++ + ++ A+ DA+ G+V N+ +
Sbjct: 232 ALRPNEPLRGYDLQRPLMVERGDLVVLMFEVPGIQLTVRARAMEDAADGEVARFINLQSN 291
Query: 135 VMVSGSVVDTGTVRV 149
V V G RV
Sbjct: 292 RTVEALVDGPGRARV 306
>gi|21108208|gb|AAM36850.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 312
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 59/148 (39%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I AGE ++ + + + + I G
Sbjct: 163 NTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGIGAGETISLADISIEKRDAARIVGAVL 222
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RR+L ++ + L ++ RG V ++ G + + G ALSDA
Sbjct: 223 ADPVAAVGKTARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMTGRALSDAG 282
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 283 ENERVSVENSSSRRVVQGIVEASGTVVV 310
>gi|39998141|ref|NP_954092.1| flagella basal body P-ring formation protein flgA [Geobacter
sulfurreducens PCA]
gi|39985087|gb|AAR36442.1| flagella basal body P-ring formation protein flgA, putative
[Geobacter sulfurreducens PCA]
gi|298507078|gb|ADI85801.1| flagellar basal body P-ring formation protein FlgA [Geobacter
sulfurreducens KN400]
Length = 248
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 62/132 (46%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ + AVV + + G+++ + + S++ G SI +VVG + +
Sbjct: 115 VTVDVEALADAVVAAHPLARGDIITSDDVTVQKRDISSVNGRVYRSIDEVVGKRVKNAVR 174
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ + + + + ++ G V II + ++ G A + + GD+I V+N+ + +
Sbjct: 175 ANTPLSGASIEKVPLVKSGQLVTIIAESPALRLTATGKARGNGAEGDIIKVQNMGSLKEI 234
Query: 138 SGSVVDTGTVRV 149
V+D GTV+V
Sbjct: 235 PARVIDVGTVQV 246
>gi|119775456|ref|YP_928196.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
amazonensis SB2B]
gi|119767956|gb|ABM00527.1| flagellar basal-body P-ring formation protein FlgA, putative
[Shewanella amazonensis SB2B]
Length = 235
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 7/149 (4%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
+ +Y+ A V+ VV + G++L+ ++ V + +RG
Sbjct: 94 SPDLDYPWQMYLSVR----AEVLFPVVVAKRPLGNGDLLDAESIEVRYVDKTLLRGQQFS 149
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
++ + G +R + D I L + +G V I + I T G AL+D +
Sbjct: 150 HLQPLYGSRVKRRIPQDAPIFADNL---CFVCKGDAVTIYAKSASFEIKTQGEALADGNE 206
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
GD I +KNI++ ++ +V+ G V V +
Sbjct: 207 GDRIRIKNINSDRVLEATVIGVGEVEVKM 235
>gi|15616942|ref|NP_240155.1| flagella basal-body P-ring formation protein FlgA precursor
[Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
gi|11386803|sp|P57418|FLGA_BUCAI RecName: Full=Flagella basal body P-ring formation protein flgA;
Flags: Precursor
gi|25323453|pir||A84969 hypothetical protein flgA [imported] - Buchnera sp. (strain APS)
gi|10039007|dbj|BAB13041.1| flagella basal body P-ring formation protein flgA precursor
[Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
Length = 226
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ G +V + I G + ES LK + + N KDVV ++ R
Sbjct: 94 LTVEVQSEGEYIVANRKIPRGTRIKESDLKILIGRLDVLPNNTYRKKKDVVNRISLREFF 153
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I + +++ +V +I+ N +S+ +LS+ + I VK ++G ++
Sbjct: 154 PLQPITSFMTRPFWLVKVNQQVTVIINGNNFKMSSKAKSLSNGAQNQNIRVK-TNSGKII 212
Query: 138 SGSVVDTGTVRVVV 151
+G + + G V V
Sbjct: 213 NGIINENGEVIVSP 226
>gi|188534174|ref|YP_001907971.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring
[Erwinia tasmaniensis Et1/99]
gi|188029216|emb|CAO97088.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring
[Erwinia tasmaniensis Et1/99]
Length = 222
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ V G VV + I+ GE ++ S ++ Q + + +G VT R +
Sbjct: 90 IQVQVQVTGSYVVATRQISQGEAISASDVRMEQGRLDTLPARTLMQPGEAIGAVTLRDIT 149
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L ++ + + + G V + + +IS+ G A+++A+ + V+ +++G +V
Sbjct: 150 PGQPMTLMMMRQAWRVKAGQTVIVYASGDGFSISSEGKAMNNAAALQSVRVR-MNSGQIV 208
Query: 138 SGSVVDTGTVRVVV 151
G V G V + +
Sbjct: 209 MGQVGSDGNVLISL 222
>gi|270262405|ref|ZP_06190676.1| SAF domain-containing protein [Serratia odorifera 4Rx13]
gi|270043089|gb|EFA16182.1| SAF domain-containing protein [Serratia odorifera 4Rx13]
Length = 217
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
VIG+ +V + I+AG L + +K + + +G V+ R +
Sbjct: 84 FIQTQVQVIGNYLVSARNISAGSRLTAADVKLKSGRLDTLAPRTLTNADKAIGAVSLRNI 143
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P + ++L R +VI G V++ IS AG A+++A+ D + V+ + +G +
Sbjct: 144 SPGQPLTFAMLRRAWVIKAGQPVQVTAQGTGFNISGAGKAMNNAAAEDSVRVR-MASGQI 202
Query: 137 VSGSVVDTGTVRVVV 151
VSG D GT+R+ +
Sbjct: 203 VSGIADDDGTIRIAL 217
>gi|1272364|gb|AAA97472.1| LfgA [Vibrio parahaemolyticus]
Length = 235
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ +SV VV + + EV+ ++LK T S ++ K +GL T R
Sbjct: 100 RINVTIKSSVTLPVVVAATTVGRSEVVTANQLKLETRTISR-SDDFYTDPKHAIGLETTR 158
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G
Sbjct: 159 RLRAGQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSG 218
Query: 135 VMVSGSVVDTGTV 147
++ V V
Sbjct: 219 RVIRAVVTGRNQV 231
>gi|150395486|ref|YP_001325953.1| flagellar basal body P-ring biosynthesis protein FlgA
[Sinorhizobium medicae WSM419]
gi|150027001|gb|ABR59118.1| SAF domain protein [Sinorhizobium medicae WSM419]
Length = 169
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 63/152 (41%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGH-AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
VR +L ++ L A AV+P I GE L+ S L+ + VTN ++R Y
Sbjct: 18 RPVRAVLLAAVASCMLPPASALAEKPTAVIPKQTIYPGETLDASMLEVVDVTNPDLRDGY 77
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
S+ +V G+VT+R LLP VI S L Y + RG+ VRI+ + G +TI+ AG L D
Sbjct: 78 VRSLDEVDGMVTKRTLLPGRVILASALREQYAVERGSTVRIVFSNGGLTITAAGSPLQDG 137
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
+IG++I V+NIDTGV+VSG+V+ T+ VV K
Sbjct: 138 AIGELIRVRNIDTGVIVSGTVMADSTIHVVAK 169
>gi|254251187|ref|ZP_04944505.1| Flagellar basal body P-ring biosynthesis protein [Burkholderia
dolosa AUO158]
gi|124893796|gb|EAY67676.1| Flagellar basal body P-ring biosynthesis protein [Burkholderia
dolosa AUO158]
Length = 370
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L+ + L + + VG
Sbjct: 234 WTVYLQAKVAVQA----TYYVAARQIAPGEPLSAADLVARDGDLTTLPVAVITDPAQAVG 289
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G AL++A+ G + V+
Sbjct: 290 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGAGFTISAEGSALANAAPGQSVRVR 349
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 350 -MSAGQIVTAIVKDAGTVEI 368
>gi|260365768|ref|ZP_05778264.1| flagellar basal body P-ring biosynthesis protein [Vibrio
parahaemolyticus K5030]
gi|260880690|ref|ZP_05893045.1| flagellar basal body P-ring biosynthesis protein [Vibrio
parahaemolyticus AN-5034]
gi|260897704|ref|ZP_05906200.1| flagellar basal body P-ring biosynthesis protein [Vibrio
parahaemolyticus Peru-466]
gi|308086270|gb|EFO35965.1| flagellar basal body P-ring biosynthesis protein [Vibrio
parahaemolyticus Peru-466]
gi|308092470|gb|EFO42165.1| flagellar basal body P-ring biosynthesis protein [Vibrio
parahaemolyticus AN-5034]
gi|308115034|gb|EFO52574.1| flagellar basal body P-ring biosynthesis protein [Vibrio
parahaemolyticus K5030]
Length = 265
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ +SV VV + + EV+ + LK T S ++ + K +GL T R
Sbjct: 130 RINVTIKSSVTLPVVVAATTVGRSEVVTANHLKLETRTISR-SDDFYTAPKHAIGLETTR 188
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G
Sbjct: 189 RLRAGQVVDPTSLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSG 248
Query: 135 VMVSGSVVDTGTV 147
++ V V
Sbjct: 249 RVIRAVVTGRNQV 261
>gi|33592475|ref|NP_880119.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
pertussis Tohama I]
gi|33572121|emb|CAE41663.1| flagella basal body P-ring formation protein [Bordetella pertussis
Tohama I]
gi|332381892|gb|AEE66739.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
pertussis CS]
Length = 236
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 6/151 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ CV +++Y + SV G V + I G+ + + L +
Sbjct: 92 LRCVA-PRTWTVYAQATV----SVPGQYYVAARQIAPGKTIEAADLTTRDGDLVALPPGV 146
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
++G+ + I + L +SRG VRI +S+ G AL +A
Sbjct: 147 ITDAAAILGMRPAHRIAAGQPIKGAGLRSAESVSRGQSVRITARGNGFVVSSEGQALDNA 206
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G + V+ +G +VSG V G V + +
Sbjct: 207 PPGATVQVR-TASGQVVSGIVQAAGLVEIQL 236
>gi|33601537|ref|NP_889097.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
bronchiseptica RB50]
gi|33575973|emb|CAE33052.1| flagella basal body P-ring formation protein [Bordetella
bronchiseptica RB50]
Length = 236
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 6/151 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ CV +++Y + SV G V + I G+ + + L +
Sbjct: 92 LRCVA-PRTWTVYAQATV----SVPGQYYVAARQIAPGKTIEAADLTTRDGDLVALPPGV 146
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
++G+ + I + L +SRG VRI +S+ G AL +A
Sbjct: 147 ITDAAAILGMRPAHRIAAGQPIKGAGLRSAESVSRGQSVRITARGNGFVVSSEGQALDNA 206
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G + V+ +G +VSG V G V + +
Sbjct: 207 PPGATVQVR-TASGQVVSGIVQAAGLVEIQL 236
>gi|308095530|ref|ZP_05906616.2| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
parahaemolyticus Peru-466]
gi|308086102|gb|EFO35797.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
parahaemolyticus Peru-466]
Length = 216
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S +V + + GE+++ S + + R + S + VVG
Sbjct: 82 WKVYVPVRVSSSV----PMIVATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVG 137
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + V+ + + V+ R KV I + MTI+T G AL D + GD + VK
Sbjct: 138 AKLKRSVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVK 194
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V D + V
Sbjct: 195 NDKSQRIIEGIVTDIAEITV 214
>gi|91225867|ref|ZP_01260836.1| flagellar basal body P-ring biosynthesis protein A [Vibrio
alginolyticus 12G01]
gi|91189517|gb|EAS75793.1| flagellar basal body P-ring biosynthesis protein A [Vibrio
alginolyticus 12G01]
Length = 248
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S+ +V + + GE+++ S + + R + S VVG
Sbjct: 114 WKVYVPVRISVSV----PMIVATRTLGRGEIVSASDVTTSMIELQRFRKDGFSSYDQVVG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + V+ + + V+ R KV I MTI+T G AL D S GD + VK
Sbjct: 170 AKLKRNVRLGDVVERNDV---CVVCRNEKVIIKAVNSGMTITTQGTALQDGSAGDQVRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V D + V
Sbjct: 227 NDKSQRIIEGIVTDIAEITV 246
>gi|310764864|gb|ADP09814.1| Flagella basal body P-ring formation protein FlgA [Erwinia sp.
Ejp617]
Length = 234
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 1/148 (0%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
R ++ + S G V + AG +L ++ + + I
Sbjct: 87 RSVIAQCGARRHYLQIQISAHGSWWVAKKNLPAGSILRAEDIESHTGSLDHQPAGILFDI 146
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
+VG T R L I + L + +++ G V II I + G AL++AS+ D
Sbjct: 147 NQIVGQTTTRALNVGSPIVQNQLRQQWLLHAGQMVDIITQGDGFRIRSQGKALANASVDD 206
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
++ V+ TG +SG V G V ++++
Sbjct: 207 MLKVQ-TRTGRTISGKVAHDGQVEILLQ 233
>gi|2275162|gb|AAB81414.1| FlgA [Sinorhizobium meliloti]
Length = 168
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 63/148 (42%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Query: 7 LLFFSLYVLSLDSLFASVIGH--AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
+ F+ L S A++ AV+P I GE L+ S L+ + VTN ++R Y HSI
Sbjct: 21 AVLFAAMASCLLSPAAALAEPPTAVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVHSI 80
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
+V G+VT+R LLP VI S L Y + RG+ VR++ G +TI+ AG L DA++GD
Sbjct: 81 DEVDGMVTKRTLLPGRVILASALREQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVGD 140
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
+I V+N+DTGV+VSG+V+ T+ VV K
Sbjct: 141 LIRVRNVDTGVIVSGTVMADSTIHVVAK 168
>gi|2494515|sp|Q56892|FLGA_YEREN RecName: Full=Flagella basal body P-ring formation protein flgA;
Flags: Precursor
gi|793897|emb|CAA88191.1| flgA [Yersinia enterocolitica]
Length = 224
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V V GH V + + AGE + +K Q + G V+
Sbjct: 88 VRRFIQTQVQVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQGAVSL 147
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R ++I G V+++ +++ G A+++A+I D + V+ + +
Sbjct: 148 RQINAGQPLTRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MAS 206
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG+V D GTV +++
Sbjct: 207 GQIVSGTVADDGTVHILL 224
>gi|221199735|ref|ZP_03572778.1| flageller protein FlgA [Burkholderia multivorans CGD2M]
gi|221208660|ref|ZP_03581660.1| flageller protein FlgA [Burkholderia multivorans CGD2]
gi|221171471|gb|EEE03918.1| flageller protein FlgA [Burkholderia multivorans CGD2]
gi|221179974|gb|EEE12378.1| flageller protein FlgA [Burkholderia multivorans CGD2M]
Length = 388
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L+ + L + + +G
Sbjct: 252 WTVYLQAKVTVHA----TYYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 307
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G AL++A+ G + V+
Sbjct: 308 ATALARIAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 367
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 368 -MAAGQIVTAIVKDAGTVEI 386
>gi|170694388|ref|ZP_02885542.1| flagella basal body P-ring formation protein FlgA [Burkholderia
graminis C4D1M]
gi|170140811|gb|EDT08985.1| flagella basal body P-ring formation protein FlgA [Burkholderia
graminis C4D1M]
Length = 532
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + SL A + S ++AGEVL + L + + + +G
Sbjct: 396 WTIYLQARVSLHA----TYYLASRAMSAGEVLTAADLVAREGDLTGLPQAIVTDPSQALG 451
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
VT + + +L +S G VR++ IS G A+++AS G + VK
Sbjct: 452 SVTLTRVSAGMPLRRDMLKSASAVSIGQTVRVVAAGDGFAISAEGSAMNNASPGQQVRVK 511
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
G ++SG V D TV + +
Sbjct: 512 -TANGQVISGIVKDGSTVEIQL 532
>gi|56460258|ref|YP_155539.1| flagellar basal body P-ring biosynthesis protein FlgA [Idiomarina
loihiensis L2TR]
gi|56179268|gb|AAV81990.1| Flagellar basal body P-ring biosynthesis protein [Idiomarina
loihiensis L2TR]
Length = 240
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 62/151 (41%), Gaps = 8/151 (5%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
++CV + YV + + V + + G++++ES L +V + +R N
Sbjct: 98 IECV-GKTNWRTYVPVRIYRY----KNVVTAASPMAPGQMISESDLVFSEVDLNRVRSNV 152
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ +VG ++ + I S ++ G V I+ + I+ AG AL+D
Sbjct: 153 FTDMTALVGARIKKRIAAGQAISASDT---CLVCEGQSVTIVAQDKTLRITAAGRALADG 209
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+ + V+N + + V V V +
Sbjct: 210 LKGESVVVENARSNKSIQAVVTGLNEVTVNL 240
>gi|253996323|ref|YP_003048387.1| flagella basal body P-ring formation protein FlgA [Methylotenera
mobilis JLW8]
gi|253983002|gb|ACT47860.1| flagella basal body P-ring formation protein FlgA [Methylotenera
mobilis JLW8]
Length = 265
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 5/142 (3%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+++Y + ++ A +V +V + G V+ L + + +
Sbjct: 128 AWTIYAQATVNVVA----QYLVAAVPLAQGRVVTADDLLFQSGDLTQLPAGIFTDLAQAQ 183
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G + + V+ +L V+ +G V + + +S G A++ A+ G V+ V
Sbjct: 184 GRIVNISMTAGTVLRQEMLKVSPVVQQGQTVMVTSSGKGFRVSAEGKAMTKANEGQVVQV 243
Query: 129 KNIDTGVMVSGSVVDTGTVRVV 150
K + +G +VSG G V VV
Sbjct: 244 K-VASGQVVSGIARQGGQVEVV 264
>gi|261253620|ref|ZP_05946193.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
orientalis CIP 102891]
gi|260937011|gb|EEX93000.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
orientalis CIP 102891]
Length = 248
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV G V + I+ G++++E + V R SI V+G
Sbjct: 114 WRVYVPVRLI----RTGPQVTLTSPISRGQLISEYDVTISMVDLQRFRRQGFTSIDAVIG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ L VI + V+ R V I + MTI+T G+AL+D S G+ I VK
Sbjct: 170 AKAKKNLRAGEVIEDRDI---CVVCRNETVTIKAVKSGMTITTKGVALTDGSHGEQIRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N + ++ G V V V+
Sbjct: 227 NSKSNRIIEGRVSGISEVTVI 247
>gi|161526190|ref|YP_001581202.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
multivorans ATCC 17616]
gi|189349094|ref|YP_001944722.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
multivorans ATCC 17616]
gi|160343619|gb|ABX16705.1| flagella basal body P-ring formation protein FlgA [Burkholderia
multivorans ATCC 17616]
gi|189333116|dbj|BAG42186.1| flagella basal body P-ring formation protein [Burkholderia
multivorans ATCC 17616]
Length = 388
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L+ + L + + +G
Sbjct: 252 WTVYLQAKVTVHA----TYYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 307
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G AL++A+ G + V+
Sbjct: 308 ATALARIAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 367
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 368 -MAAGQIVTAIVKDAGTVEI 386
>gi|123442788|ref|YP_001006765.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122089749|emb|CAL12602.1| flagella basal body P-ring formation protein FlgA [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 200
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V V GH V + + AG + ++ Q + G V+
Sbjct: 64 VRRFIQTQVQVSGHYAVAARQLAAGAKMTLQDIEMKQGRLDTLPPGALLEPNFAQGAVSL 123
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R ++I G V+++ +++ G A+++A+I D + V+ + +
Sbjct: 124 RPINAGQPLTRNMLRRLWIIKAGQDVQVLAQGEGFNVNSNGKAMNNAAIQDNVRVR-MAS 182
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG+V D GTV +++
Sbjct: 183 GQIVSGTVADDGTVHILL 200
>gi|77968586|gb|ABB09966.1| Flagellar protein FlgA [Burkholderia sp. 383]
Length = 421
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L+ + L + + +G
Sbjct: 285 WTVYLQAKVTVQA----TYYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 340
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G AL++A+ G + V+
Sbjct: 341 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 400
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 401 -MAAGQIVTAIVKDAGTVEI 419
>gi|332533181|ref|ZP_08409050.1| flagellar basal-body P-ring formation protein FlgA
[Pseudoalteromonas haloplanktis ANT/505]
gi|332037463|gb|EGI73917.1| flagellar basal-body P-ring formation protein FlgA
[Pseudoalteromonas haloplanktis ANT/505]
Length = 235
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + VV + + GEV+ +S L +R Y ++G ++R +
Sbjct: 105 VHVRVVEMAPVVVATANLTRGEVITKSHLSIEMKPTHFVRIQYLDDPTMLIGSRSKRNIR 164
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ L+ + ++ +G V I + I T GIAL D ++G+ I +KN +G ++
Sbjct: 165 SGMPVLLNQI---CMVCKGDSVNIYANLRGLRIKTTGIALEDGTLGEQIQIKNKKSGKVL 221
Query: 138 SGSVVDTGTVRV 149
+ V +V+V
Sbjct: 222 NARVDGVESVQV 233
>gi|332161318|ref|YP_004297895.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325665548|gb|ADZ42192.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 226
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V V GH V + + AGE + +K Q + G V+
Sbjct: 90 VRRFIQTQVQVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQGAVSL 149
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R ++I G V+++ +++ G A+++A+I D + V+ + +
Sbjct: 150 RQINAGQPLTRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MAS 208
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG+V D GTV +++
Sbjct: 209 GQIVSGTVADDGTVHILL 226
>gi|163803165|ref|ZP_02197048.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
AND4]
gi|159173065|gb|EDP57898.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
AND4]
Length = 228
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ ++V +V + I EV++ S LK T S + ++ + V+GL T R
Sbjct: 93 RINVTIKSAVTLPVLVATSTIGRNEVISASNLKTETRTISR-QNDFFTQMNQVIGLETTR 151
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ I + L P +I +G +V II ++ + ST G+AL G I V+N +G
Sbjct: 152 RIRAGQTIAPTNLSSPPLIEKGNEVLIIASKEGFSASTKGVALEQGKKGQQIEVENTRSG 211
Query: 135 VMVSGSVVDTGTV 147
++ V V
Sbjct: 212 KVIRAIVTGVNQV 224
>gi|328543155|ref|YP_004303264.1| flagellar protein FlgA [polymorphum gilvum SL003B-26A1]
gi|326412901|gb|ADZ69964.1| flagellar protein FlgA [Polymorphum gilvum SL003B-26A1]
Length = 322
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 61/133 (45%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
S A + + I G +L L +++ + S ++VGL R L
Sbjct: 175 TLSGVAREMVDVIALLQPIGRGSILKPEDLTVIRLPRQRVPSRAVTSPDEIVGLAARTTL 234
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P + + RP +++RG KV ++ M ++ G A+S + GD I V N+ + +
Sbjct: 235 RPGQPLSRTDFERPLIVARGEKVTLLYEMSGMKLTARGQAMSAGAEGDEIDVMNLQSRRI 294
Query: 137 VSGSVVDTGTVRV 149
++G+VV G +RV
Sbjct: 295 ITGTVVARGQIRV 307
>gi|269965430|ref|ZP_06179549.1| flagellar basal body P-ring biosynthesis protein [Vibrio
alginolyticus 40B]
gi|269829909|gb|EEZ84139.1| flagellar basal body P-ring biosynthesis protein [Vibrio
alginolyticus 40B]
Length = 266
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S+ +V + + GE+++ S + + R + S VVG
Sbjct: 128 WKVYVPVRISVSV----PMIVATRTLGRGEIVSASDVTTSMIELQRFRKDGFSSYDQVVG 183
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + V+ + + V+ R KV I MTI+T G AL D S GD + VK
Sbjct: 184 AKLKRNVRLGDVVERNDV---CVVCRNEKVIIKAVNSGMTITTQGTALQDGSAGDQVRVK 240
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ V D + V
Sbjct: 241 NDKSQRIIEXIVTDIAEITV 260
>gi|257471390|ref|ZP_05635389.1| flagella basal-body P-ring formation protein FlgA precursor
[Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)]
gi|311086073|gb|ADP66155.1| flagella basal-body P-ring formation protein FlgA precursor
[Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)]
Length = 229
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ G +V + I G + ES LK + + N KDVV ++ R
Sbjct: 97 LTVEVQSEGEYIVANRKIPRGTRIKESDLKILIGRLDVLPNNTYRKKKDVVNRISLRDFF 156
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I + +++ +V +I+ N +S+ +LS+ + I VK ++G ++
Sbjct: 157 PLQPITSFMTRPFWLVKVNQQVTVIINGNNFKMSSKAKSLSNGAQNQNIRVK-TNSGKII 215
Query: 138 SGSVVDTGTVRVVV 151
+G + + G V V
Sbjct: 216 NGIINENGEVIVSP 229
>gi|91785638|ref|YP_560844.1| putative flagella basal body P-ring formation protein [Burkholderia
xenovorans LB400]
gi|91689592|gb|ABE32792.1| putative flagella basal body P-ring formation protein [Burkholderia
xenovorans LB400]
Length = 502
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + SL A + + + GEVL + L + + VG
Sbjct: 366 WTIYLQARISLRA----TYYLAARAMAPGEVLTAADLVARDGDLTGLPQAIVTDPSQAVG 421
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
VT + + +L +S G VR++ IS G A+++AS G + VK
Sbjct: 422 SVTLTRVAGGMPLRRDMLKSASAVSIGQTVRVVAAGQGFAISAEGSAMNNASPGQQVRVK 481
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
G ++SG V D TV + +
Sbjct: 482 -TANGQIISGIVKDGSTVEIQL 502
>gi|221215567|ref|ZP_03588530.1| flageller protein FlgA [Burkholderia multivorans CGD1]
gi|221164555|gb|EED97038.1| flageller protein FlgA [Burkholderia multivorans CGD1]
Length = 388
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L+ + L + + +G
Sbjct: 252 WTVYLQAKVTVHA----TYYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 307
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G AL++A+ G + V+
Sbjct: 308 ATALARIAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 367
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 368 -MAAGQIVTAIVKDAGTVEI 386
>gi|238755328|ref|ZP_04616671.1| Flagella basal body P-ring formation protein flgA [Yersinia ruckeri
ATCC 29473]
gi|238706464|gb|EEP98838.1| Flagella basal body P-ring formation protein flgA [Yersinia ruckeri
ATCC 29473]
gi|253317691|gb|ACT22780.1| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia
ruckeri]
Length = 219
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
V G +V + + AGE L E + + + + G + R +
Sbjct: 86 FLQTQVQVSGKYLVATRQLAAGEKLTEKEMTYKEGRLDTLPPGALLDARFAKGTLALRHI 145
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ ++L R +V+ G V+++ +++ G A+++A++ D + V+ + +G +
Sbjct: 146 NAGQPLTRTMLRRSWVVKAGQAVQVVAEGEGFNVNSEGKAMNNAALQDNVRVR-MVSGQI 204
Query: 137 VSGSVVDTGTVRVVV 151
VSG+V D G +R+++
Sbjct: 205 VSGTVGDDGVIRIML 219
>gi|238793994|ref|ZP_04637612.1| Flagella basal body P-ring formation protein flgA [Yersinia
intermedia ATCC 29909]
gi|238726626|gb|EEQ18162.1| Flagella basal body P-ring formation protein flgA [Yersinia
intermedia ATCC 29909]
Length = 226
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V V GH V + GE + S ++ Q + G V+
Sbjct: 90 VRRFIQTQVQVSGHYAVAGRQLAVGEKIAASDIQMKQGRLDTLPPGALLEPHFAQGAVSL 149
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R +VI G +V+++ +++ G A+++A+I D + V+ + +
Sbjct: 150 RRINAGQPLTRNMLRRLWVIKAGQEVQVLAQGEGFNVNSNGKAMNNAAIQDNVRVR-MAS 208
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG+V + GT+R+++
Sbjct: 209 GQIVSGTVGEDGTIRIML 226
>gi|146305246|ref|YP_001185711.1| SAF domain-containing protein [Pseudomonas mendocina ymp]
gi|145573447|gb|ABP82979.1| SAF domain protein [Pseudomonas mendocina ymp]
Length = 281
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+ ASV AV + VI G+ + +++ +V + S+ +VVG +R +
Sbjct: 149 VQASVFVAAVHAARVIERGQTIAAEQVQLQEVNVGRSSRGFYSSLDEVVGQGAKRRIRAG 208
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
+I S+L P ++ RG +V I+ Q ++ S G AL + G+VI V+N+ + ++
Sbjct: 209 ALIAPSLLSAPLLVRRGQQVTIVANQDGISASATGEALGNGREGEVIRVRNLGSQKVIEA 268
Query: 140 SVVDTGTVR 148
VV+ G V
Sbjct: 269 QVVEEGVVT 277
>gi|302392938|ref|YP_003828758.1| flagella basal body P-ring formation protein FlgA [Acetohalobium
arabaticum DSM 5501]
gi|302205015|gb|ADL13693.1| flagella basal body P-ring formation protein FlgA [Acetohalobium
arabaticum DSM 5501]
Length = 328
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 61/148 (41%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
V + L + +V I + L E++ K + +
Sbjct: 181 VNIYVDGKLAKKKYIQAQVTAYQRVLVAQESIKRRQSLAENQFKWEKRPLVKLHSQPFTD 240
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ + R + ++ +++ P ++ R +V+II G + +STAG+AL + G
Sbjct: 241 VDSIQNYRLERSINTGQILTRNLIEIPPLVKRRDRVKIIAVVGRVRVSTAGVALESGTEG 300
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ I V+NI + + V+ TV+V++
Sbjct: 301 EHIKVRNIKSNREIMAKVIGKKTVKVIL 328
>gi|218887605|ref|YP_002436926.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218758559|gb|ACL09458.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 346
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 5/152 (3%)
Query: 2 DCVRFLL---FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
+ +RF + S+ S F V + +N +VL ++ ++ + +R
Sbjct: 197 NTLRFAVREVDGSIVRKFTGSAFVDVWADVPCAAQPVNKDDVLTPEKITRVRKNLAYLRE 256
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
+ R + D VI S L + RG+ V ++ G++ + G A++
Sbjct: 257 PAWDGLGGP--WRLTRPVGADQVIYQSDLSGVPTVRRGSVVTVLYDSGSVRLQVQGEAMA 314
Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
D +G+ I V+N+ + + +V D GTV V
Sbjct: 315 DGGLGETIPVRNMQSKRQIYAAVKDGGTVVVR 346
>gi|161702954|ref|YP_370610.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
sp. 383]
Length = 320
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L+ + L + + +G
Sbjct: 184 WTVYLQAKVTVQA----TYYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 239
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G AL++A+ G + V+
Sbjct: 240 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 299
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 300 -MAAGQIVTAIVKDAGTVEI 318
>gi|153831669|ref|ZP_01984336.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi
HY01]
gi|148872179|gb|EDL70996.1| flagellar basal body P-ring biosynthesis protein [Vibrio harveyi
HY01]
Length = 265
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ ++V ++ + I E ++ S LK T S + ++ +GL T R
Sbjct: 130 RINVTIKSAVTLPVLIATSTIGRNESISASNLKTETRTISR-QDDFFTKANQAIGLETTR 188
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ +I + L P +I +G +V II ++ + ST G+AL G I V+N +G
Sbjct: 189 RIRAGQIIDPTNLSSPPLIEKGNEVIIIASKDGFSASTKGVALEQGKKGQQIEVENTSSG 248
Query: 135 VMVSGSVVDTGTV 147
++ V V
Sbjct: 249 KVIRAVVTGLNQV 261
>gi|82702447|ref|YP_412013.1| flageller protein FlgA [Nitrosospira multiformis ATCC 25196]
gi|82410512|gb|ABB74621.1| flagellar protein FlgA [Nitrosospira multiformis ATCC 25196]
Length = 248
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+++YV + V+ +V + + G+V++ S L + + + +
Sbjct: 111 SWTIYVRATV----KVVAEYLVSTRPLRQGQVIDASDLTSRKGDLTQLPPGIVTDWNQAI 166
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G L + +L + + V+++ + ++S G AL+ A+ G + V
Sbjct: 167 GRTLGGNLPFGSPLRQDMLRAQTAVIQNQTVKLVSSGRGFSVSAEGKALTHATEGQPVTV 226
Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
+ +G +VSG V V
Sbjct: 227 R-SASGAVVSGIARAGAIVEV 246
>gi|330818589|ref|YP_004362294.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
gladioli BSR3]
gi|327370982|gb|AEA62338.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
gladioli BSR3]
Length = 539
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++LY+ S SV G V + ++ GEVL + L + + VG
Sbjct: 403 WTLYLQSKI----SVQGTYYVAARALSPGEVLTAADLVAHDGDLTQLPLAIITDPGQAVG 458
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + + +L ++ G VR++ TIS+ G +++A G + V+
Sbjct: 459 GTSLVRVAAGLPLRQDMLRSAASVTIGQTVRVVAAGKGFTISSEGSVMNNAGPGQQVRVR 518
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D+GTV +
Sbjct: 519 -LAAGQIVTAVVKDSGTVEI 537
>gi|311992321|gb|ADQ26734.1| chaperone for P-ring biosynthesis protein [Aeromonas hydrophila]
Length = 284
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ LY+ S+ V S + G++L+E L + + IRG+Y ++G
Sbjct: 150 WDLYLPVRV----SIQKPYVTVSTPVAKGDILSEGVLTQAYQDQTLIRGDYLSDTTALIG 205
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ ++R L P I LS + V+ +G +V + +M I T AL D S GD+I +
Sbjct: 206 VRSKRELKPGQPIRLSQV---CVVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLV 262
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
NI +G V G V G+V V
Sbjct: 263 NIRSGKTVQGKVNAVGSVVV 282
>gi|330445342|ref|ZP_08308994.1| flagella basal body P-ring formation protein FlgA [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328489533|dbj|GAA03491.1| flagella basal body P-ring formation protein FlgA [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 235
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ LYV L VV +V + G VL +L + + RG+ ++++G
Sbjct: 101 WQLYVPVNVQL----TLPKVVAAVALGRGMVLTPDKLSVQMIESRFQRGSSFDDPREIIG 156
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + ++ + ++ R V I G + I T G ALSD +IGD I V+
Sbjct: 157 SKVKRSVKAGEMVQARDI---CLVCRNDSVIIRAGTGGLNIVTKGKALSDGAIGDEIRVQ 213
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + M+ + G V V
Sbjct: 214 NTKSRRMIDAIITAVGEVTV 233
>gi|307945667|ref|ZP_07661003.1| flagella basal body P-ring formation protein FlgA [Roseibium sp.
TrichSKD4]
gi|307771540|gb|EFO30765.1| flagella basal body P-ring formation protein FlgA [Roseibium sp.
TrichSKD4]
Length = 326
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 1/145 (0%)
Query: 4 VRFLLFFSLYVL-SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VRF S A + + +G+VL + ++ + + N
Sbjct: 165 VRFSFAGEFGRQNVSLSGHAQEMLEVTTLLQPLRSGQVLRLEDMTTTRLPRTKVPANAVT 224
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
K + GL R L + + + +P +ISRG KV I G M ++T G A+ D ++
Sbjct: 225 DPKQIAGLAARTGLRANMPLVRNDFAKPVLISRGEKVSITYMVGGMKLTTRGRAMDDGAL 284
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTV 147
GD I +KN+D+G +V V G V
Sbjct: 285 GDPIDIKNLDSGRIVPAMVRSRGQV 309
>gi|259908816|ref|YP_002649172.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring
[Erwinia pyrifoliae Ep1/96]
gi|224964438|emb|CAX55947.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring
[Erwinia pyrifoliae Ep1/96]
Length = 222
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ V G ++ + ++ GEV++ S ++ + D G + R +
Sbjct: 90 IQVQLQVTGSYLIATRQLSQGEVISASDVRIEHGRLDTLPARTLLRADDATGAIALRAIT 149
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ + ++ +P+ + G V + + TI++ G A+++A+ + V+ +++G +V
Sbjct: 150 AGQPVTMMMMRQPWRVKAGQTVTVYASGEGFTINSEGKAMNNAAAMQSVRVR-MNSGQIV 208
Query: 138 SGSVVDTGTVRVVV 151
+G + G + + +
Sbjct: 209 TGKIDADGNILISL 222
>gi|283478798|emb|CAY74714.1| Flagella basal body P-ring formation protein flgA precursor
[Erwinia pyrifoliae DSM 12163]
Length = 223
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ V G ++ + ++ GEV++ S ++ + D G + R +
Sbjct: 91 IQVQLQVTGSYLIATRQLSQGEVISASDVRIEHGRLDTLPARTLLRADDATGAIALRAIT 150
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ + ++ +P+ + G V + + TI++ G A+++A+ + V+ +++G +V
Sbjct: 151 AGQPVTMMMMRQPWRVKAGQTVTVYASGEGFTINSEGKAMNNAAAMQSVRVR-MNSGQIV 209
Query: 138 SGSVVDTGTVRVVV 151
+G + G + + +
Sbjct: 210 TGKIDADGNILISL 223
>gi|187925765|ref|YP_001897407.1| flagella basal body P-ring formation protein FlgA [Burkholderia
phytofirmans PsJN]
gi|187716959|gb|ACD18183.1| flagella basal body P-ring formation protein FlgA [Burkholderia
phytofirmans PsJN]
Length = 504
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + SL A + + + GEVL + L + + VG
Sbjct: 368 WTIYLQARISLHA----TYYLAARAMAPGEVLTAADLVARDGDLTGLPQAIVTDPSQAVG 423
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
VT + + +L +S G VR++ IS G A+++AS G + VK
Sbjct: 424 SVTLTRVAGGMPLRRDMLKSASAVSIGQTVRVVAAGEGFAISAEGSAMNNASPGQQVRVK 483
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
G ++SG V D TV + +
Sbjct: 484 -TANGQIISGIVKDGSTVEIQL 504
>gi|15964416|ref|NP_384769.1| flagellar basal body P-ring biosynthesis protein FlgA
[Sinorhizobium meliloti 1021]
gi|17380481|sp|Q52947|FLGA_RHIME RecName: Full=Flagellar protein flgA; Flags: Precursor
gi|15073593|emb|CAC45235.1| Flagellar precursor transmembrane protein [Sinorhizobium meliloti
1021]
Length = 168
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 62/148 (41%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 7 LLFFSLYVLSLDSLFASVIGH--AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
+ F+ L S A++ AV+P I GE L+ S L+ + VTN ++R Y SI
Sbjct: 21 AVLFAAMASCLLSPAAALAEPPTAVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVRSI 80
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
+V G+VT+R LLP VI S L Y + RG+ VR++ G +TI+ AG L DA++GD
Sbjct: 81 DEVDGMVTKRTLLPGRVILASALREQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVGD 140
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
+I V+N+DTGV+VSG+V+ T+ VV K
Sbjct: 141 LIRVRNVDTGVIVSGTVMADSTIHVVAK 168
>gi|149908763|ref|ZP_01897424.1| flagellar basal body P-ring biosynthesis protein [Moritella sp.
PE36]
gi|149808305|gb|EDM68244.1| flagellar basal body P-ring biosynthesis protein [Moritella sp.
PE36]
Length = 269
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 55/134 (41%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ IN ++L + ++ + S + S + +V +R +
Sbjct: 135 RAHAKVKIGLEVWHAKTDINPNQILKKQNIQLQRGVISRHTQRFITSSQQLVNQRAKRRI 194
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+I S L + ++ R +V I G+ +S G AL + +GD I +KN+ +G
Sbjct: 195 RSGKIILPSQLQQRLLVERNDEVIIRAGSGSFVVSMKGKALQNGQLGDKIYIKNLSSGKK 254
Query: 137 VSGSVVDTGTVRVV 150
+ ++ +G V +
Sbjct: 255 IQAKIIASGVVETL 268
>gi|117619788|ref|YP_857349.1| flagella basal body P-ring formation protein FlgA [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117561195|gb|ABK38143.1| flagella basal body P-ring formation protein FlgA [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 285
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ LY+ S+ V S + G++L+E L + + +RG+Y ++G
Sbjct: 151 WDLYLPVRV----SIQKPYVTVSTPVAKGDILSEGVLTQAYQDQTLMRGDYLSDTTALIG 206
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ ++R L P I LS + V+ +G +V + +M I T AL D S GD+I +
Sbjct: 207 VRSKRELKPGQPIRLSQV---CVVCKGDQVTLSAENSSMQIKTMARALQDGSFGDMIRLV 263
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
NI +G V G V G+V V
Sbjct: 264 NIRSGKTVQGKVNAVGSVVV 283
>gi|88704310|ref|ZP_01102024.1| flagella basal body P-ring formation protein FlgA [Congregibacter
litoralis KT71]
gi|88701361|gb|EAQ98466.1| flagella basal body P-ring formation protein FlgA [Congregibacter
litoralis KT71]
Length = 252
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ ++LY+ + S + V + G +L L+ + + +
Sbjct: 113 SVPWTLYLRAEVSASLDL----PVLKKALPRGSILGADDLEIVTRRVTAQVADVILEPAA 168
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
G+ +R L + + P ++SRG V +I G + + G A+ + GD +
Sbjct: 169 AEGMELKRPLPAGSTLRHGHVDLPELVSRGQMVTLIAGGGGVEVRMQGKAMGSGAQGDRL 228
Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
V N+ +G V G ++ G++R+
Sbjct: 229 LVTNLTSGRRVEGLILPDGSIRI 251
>gi|300716214|ref|YP_003741017.1| flagellar biosynthesis, assembly of basal-body periplasmic P ring
[Erwinia billingiae Eb661]
gi|299062050|emb|CAX59166.1| Flagellar biosynthesis, assembly of basal-body periplasmic P ring
[Erwinia billingiae Eb661]
Length = 222
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ V G +V + + G L +K + + S ++V V R ++
Sbjct: 90 IQVQVQVTGDYLVAARQVIRGGTLTADDVKIQRGRLDTLPARTVMSAEEVTDAVALRDII 149
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + ++ +P+ + G V + G +IS+ G A+++A+ ++ V+ + +G +V
Sbjct: 150 PGQPLTQMMVRQPWRVKAGQNVTVTANGGGFSISSEGRAMNNATTAQLVRVR-MSSGQIV 208
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 209 SGKVGADGIILITL 222
>gi|163802609|ref|ZP_02196501.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. AND4]
gi|159173692|gb|EDP58511.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp. AND4]
Length = 216
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S +V + + GE+++ S + + R + + + VVG
Sbjct: 82 WKVYVPVRISASV----PMIVSTRQLGRGEIISTSDVTTSMIELQRFRKDGFTTYEQVVG 137
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + V+ + + V+ R KV I +G MTI+T G AL D + GD + VK
Sbjct: 138 AKLKRNVRLGDVVERNDV---CVVCRNEKVTIQAVKGGMTITTQGTALQDGATGDQVRVK 194
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V + + +
Sbjct: 195 NDKSQRIIEGIVTNIAEITI 214
>gi|261821149|ref|YP_003259255.1| flagellar basal body P-ring biosynthesis protein FlgA
[Pectobacterium wasabiae WPP163]
gi|261605162|gb|ACX87648.1| flagella basal body P-ring formation protein FlgA [Pectobacterium
wasabiae WPP163]
Length = 222
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
V G+ V S IN G L E+ + + + +++ G V R L
Sbjct: 89 FIQTEVQVTGNYVTSSRPINRGTTLTENDIGLTKGRLDLLPLRPILTLQGAQGAVLLRDL 148
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P VI S++ R +V+ G V+II TI+ G A+++A+ G + V+ G +
Sbjct: 149 TPGQVITASMIRRAWVVKAGQSVQIIAQGEGFTINGEGKAMNNAAAGQAVRVR-TANGQI 207
Query: 137 VSGSVVDTGTVRV 149
+SG + G + +
Sbjct: 208 ISGITNEDGIILI 220
>gi|260772269|ref|ZP_05881185.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
metschnikovii CIP 69.14]
gi|260611408|gb|EEX36611.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
metschnikovii CIP 69.14]
Length = 255
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV ++ V ++ G+ + ++ + V R S V+G
Sbjct: 121 WRIYVPVRLTM----TVPMVTALNALSRGQTITQNDITLSMVDLLRFRRQGFSSQDMVIG 176
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
T+R L VI + + V+ R V I M I+T G ALSD ++G+ I VK
Sbjct: 177 AKTKRNLQLGDVINRNDI---CVVCRNESVLIRAISNGMNITTRGTALSDGNLGEQIKVK 233
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ V G V V
Sbjct: 234 NDRSNRIIDAQVSGMGEVTV 253
>gi|149911708|ref|ZP_01900316.1| flagella basal body P ring formation protein FlgA [Moritella sp.
PE36]
gi|149805238|gb|EDM65255.1| flagella basal body P ring formation protein FlgA [Moritella sp.
PE36]
Length = 233
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
VR + + + VV + ++ G +L ++ K + +R Y
Sbjct: 88 TVRIRCDSTDNWQLHVPVKIIRLVPVVVSNRPLSKGSLLTKNNTKIEYMNRVLLRSGYIS 147
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ V +R L +I + ++ +G V + + GN+T+ T G+AL++ +
Sbjct: 148 DLTFVNRARLKRQLSSGQMISTRDI---CLVCKGENVTLTSSVGNLTVKTDGMALANGIL 204
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G+ I V+N + +VSG V G +++
Sbjct: 205 GEKIKVRNSKSKRIVSGIVQAAGIIQI 231
>gi|146341905|ref|YP_001206953.1| flagellar basal body P-ring biosynthesis protein FlgA
[Bradyrhizobium sp. ORS278]
gi|146194711|emb|CAL78736.1| putative flagellar protein FlgA [Bradyrhizobium sp. ORS278]
Length = 351
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 2 DCVRFLLFFSLYVLS----LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57
RF + F L + A AVV + I+ EV+ L+ + +
Sbjct: 167 RSGRFDIVFELGTAGSTKLRYTGTAIETVEAVVLTRNIDRNEVIRAGDLQTERRPKVELG 226
Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
G S + VG+ RR + + + L +P ++ R V +I + ++T G AL
Sbjct: 227 GAEPASRELAVGMQMRRPVRAGQALKATDLAKPDLVQRDQTVTLIYQTAGIYLTTRGKAL 286
Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ GDV++V N+ + ++G V+ G V +
Sbjct: 287 ESGTEGDVVSVLNLQSKRTITGRVIGRGQVSI 318
>gi|318605238|emb|CBY26736.1| flagellar basal-body P-ring formation protein FlgA [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 226
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V V GH V + + AGE + +K Q + G V+
Sbjct: 90 VRRFIQTQVQVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQGAVSL 149
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R ++I G V+++ +++ G A+++A+I D + V+ + +
Sbjct: 150 RQINAGQPLTRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MAS 208
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +V+G+V D GTV +++
Sbjct: 209 GQIVNGTVADDGTVHILL 226
>gi|77359715|ref|YP_339290.1| flagellar biosynthesis; assembly of basal-body periplasmic P-ring
[Pseudoalteromonas haloplanktis TAC125]
gi|76874626|emb|CAI85847.1| putative flagellar biosynthesis; assembly of basal-body periplasmic
P-ring [Pseudoalteromonas haloplanktis TAC125]
Length = 235
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + VV +V + GEV+ + L + IR Y + ++G ++R +
Sbjct: 105 VHVRVTETAPVVVANVNLARGEVITAAHLSIEMRSTHFIRVQYLDNPALLIGSRSKRNIR 164
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ LS + ++ +G V I + + T GIAL D S+G+ + VKN TG ++
Sbjct: 165 SGMPLLLSQI---CMVCKGDAVNINANIKGLKVKTTGIALEDGSLGEQVKVKNKKTGKVL 221
Query: 138 SGSVVDTGTVRV 149
+ V +V+V
Sbjct: 222 NARVDGVESVQV 233
>gi|259907630|ref|YP_002647986.1| Flagella basal body P-ring formation protein FlgA [Erwinia
pyrifoliae Ep1/96]
gi|224963252|emb|CAX54736.1| Flagella basal body P-ring formation protein FlgA [Erwinia
pyrifoliae Ep1/96]
gi|283477472|emb|CAY73388.1| Flagella basal body P-ring formation protein flgA precursor
[Erwinia pyrifoliae DSM 12163]
Length = 234
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 1/148 (0%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
R ++ + S G V + G V+ ++ + + I
Sbjct: 87 RSVIAQCGARRHYLQIQISAHGSWWVAKKNLPVGSVIRAEDIESHTGSLDHQPAGILFDI 146
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
+VG T R L I + L + +++ G V II I + G AL++AS+ D
Sbjct: 147 NQIVGQTTTRALNVGSPIVQNQLRQQWLLHAGQMVDIITQGDGFRIRSQGKALANASVDD 206
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
++ V+ TG +SG V G V ++++
Sbjct: 207 MLKVQ-TRTGRTISGKVAHDGQVEILLQ 233
>gi|296157460|ref|ZP_06840295.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
Ch1-1]
gi|295892232|gb|EFG72015.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
Ch1-1]
Length = 504
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + SL A + + + GEVL + L + + VG
Sbjct: 368 WTIYLQARISLRA----TYYLAARAMAPGEVLTAADLVARDGDLTGLPQAIVTDPSQAVG 423
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
VT + + +L +S G VR++ IS G A+++AS G + VK
Sbjct: 424 SVTLTRVAGGMPLRRDMLKSASAVSIGQTVRVVAAGEGFAISAEGSAMNNASPGQQVRVK 483
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
G ++SG V D TV + +
Sbjct: 484 -TANGQIISGIVKDGSTVEIQL 504
>gi|327393467|dbj|BAK10889.1| flagella basal body P-ring formation protein FlgA precursor
[Pantoea ananatis AJ13355]
Length = 219
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ V G +V + +I G + + + N+ + + V V R +
Sbjct: 87 IQVQVQVTGDYLVATKLIARGSTVTKEDFRIENGRLDNLPPRTLFTDESVADSVVLRDIQ 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + S+L +P+ + G V ++ + S G AL++ +I + V+ + G +V
Sbjct: 147 PGQPVSQSMLRQPWRVKAGQDVMVVASGDGFDASGEGKALNNGTISQWVRVR-MGNGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V D G + + +
Sbjct: 206 SGRVSDDGKILITL 219
>gi|312172056|emb|CBX80313.1| Flagella basal body P-ring formation protein flgA precursor
[Erwinia amylovora ATCC BAA-2158]
Length = 222
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ V G +V + ++ GE ++ S ++ + + D G + R ++
Sbjct: 90 IQVQLQVTGSYLVANRQLSQGEAISASDVRIEHGRLDALPARTLLNSDDATGAIVLRAIM 149
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + + ++ +P+ + G V + + TI + G A+++A+ + V+ +++G +V
Sbjct: 150 PGQPVTMMMIRQPWRVKAGQAVTVYASGEGFTIHSEGKAMNNAAAMQSVRVR-MNSGQIV 208
Query: 138 SGSVVDTGTVRVVV 151
+G + G + + +
Sbjct: 209 TGKIDADGNILISL 222
>gi|310767286|gb|ADP12236.1| Flagellar biosynthesis; assembly of basal-body periplasmic P ring
[Erwinia sp. Ejp617]
Length = 222
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ V G +V + ++ GEV++ S ++ + + G + R +
Sbjct: 90 IQVQLQVTGSYLVATRQLSQGEVISASDVRIEHGRLDTLPARTLLRADNATGAIALRAIT 149
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ + ++ +P+ + G V + + TI++ G A+++A+ + V+ +++G +V
Sbjct: 150 AGQPVTMMMMRQPWRVKAGQTVTVYASGEGFTINSEGKAMNNAAAMQSVRVR-MNSGQIV 208
Query: 138 SGSVVDTGTVRVVV 151
+G + G + + +
Sbjct: 209 NGKIDADGNILISL 222
>gi|83594176|ref|YP_427928.1| flagellar basal body P-ring biosynthesis protein FlgA
[Rhodospirillum rubrum ATCC 11170]
gi|83577090|gb|ABC23641.1| Flageller protein FlgA [Rhodospirillum rubrum ATCC 11170]
Length = 360
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 50/137 (36%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
S V S + E++ + ++ + + D+VG+ R
Sbjct: 213 RVRISGRLYETREIPVLSRRVGRDEIIGPRDVSFLRERLDRLPPDAITDAADLVGMAPRV 272
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ + + + RP ++ +GA V + L + +S G AL + GD + V N +
Sbjct: 273 AVRDGQPLRRADVVRPTLLKKGALVTMELRMPGIAVSAQGRALDSGAEGDTVRVINTASN 332
Query: 135 VMVSGSVVDTGTVRVVV 151
+ +V V V
Sbjct: 333 QTILATVSGGNRVIVQA 349
>gi|323527717|ref|YP_004229870.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
CCGE1001]
gi|323384719|gb|ADX56810.1| flagella basal body P-ring formation protein FlgA [Burkholderia sp.
CCGE1001]
Length = 527
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 5/142 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + SL A + ++ GEVL + L + + VG
Sbjct: 391 WTIYLQARVSLHA----TYYLAGRAMSVGEVLTAADLVARDGDLTGLPQAIVTDPAQAVG 446
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
VT + + +L +S G VR++ IS+ G A+++AS G + VK
Sbjct: 447 SVTLTRVSAGMPLRRDMLKSASAVSIGQTVRVVAAGDGFAISSEGSAMNNASPGQQVRVK 506
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
G ++SG V D TV + +
Sbjct: 507 -TANGQIISGIVKDGATVEIQL 527
>gi|258621043|ref|ZP_05716077.1| flagellar protein, putative [Vibrio mimicus VM573]
gi|258625271|ref|ZP_05720179.1| flagellar protein, putative [Vibrio mimicus VM603]
gi|258582444|gb|EEW07285.1| flagellar protein, putative [Vibrio mimicus VM603]
gi|258586431|gb|EEW11146.1| flagellar protein, putative [Vibrio mimicus VM573]
Length = 255
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + + + + ++ G++++ + V R + + V+G
Sbjct: 121 WRIYVPVRLT----ITIPLITAAAPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPETVIG 176
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ + VI S + ++ R V I + M+I+T G A+SD +G+ I VK
Sbjct: 177 AKIKKNVRVGDVIEQSDV---CIVCRNESVVIKAVRSGMSITTKGTAMSDGVLGEQIKVK 233
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ V G V V
Sbjct: 234 NDKSNRIIDAQVSGVGEVTV 253
>gi|253688976|ref|YP_003018166.1| flagella basal body P-ring formation protein FlgA [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251755554|gb|ACT13630.1| flagella basal body P-ring formation protein FlgA [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 222
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
V G+ V S IN G L E + + + +++ G V R L
Sbjct: 89 FIQTEVQVTGNYVTSSRPINRGTTLTEKDMSLTKGRLDLLPLRPILTLQGAQGAVLLRDL 148
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P VI S++ R +V+ G V+II TI+ G A+++A++G + V+ G +
Sbjct: 149 TPGQVITASMIRRAWVVKAGQSVQIIAQGEGFTINGEGKAMNNAAVGQAVRVR-TANGQI 207
Query: 137 VSGSVVDTGTVRV 149
+SG G + +
Sbjct: 208 ISGITNKDGIILI 220
>gi|328473460|gb|EGF44308.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
parahaemolyticus 10329]
Length = 198
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S +V + + GE+++ S + + R + S + VVG
Sbjct: 64 WKVYVPVRVSSSV----PMIVATRQLGRGEIISASDVTTSMIELQRFRKDGFSSFEQVVG 119
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + V+ + + V+ R KV I + MTI+T G AL D + GD + VK
Sbjct: 120 AKLKRSVRLGDVVERNDV---CVVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVK 176
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V D + +
Sbjct: 177 NDKSQRIIEGIVTDIAEITI 196
>gi|149188060|ref|ZP_01866355.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii
AK1]
gi|148838048|gb|EDL54990.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii
AK1]
Length = 248
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ LYV S+ V + ++ G +++ + V + R VVG
Sbjct: 114 WRLYVPVRM----SISLPLVTATRPLSRGNIVSSDDVTMSMVDKNRFRRQGFTEFDQVVG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ + VI + + V+ R KV I +G MTIST G AL+D + GD + VK
Sbjct: 170 AKLKKNMNMGDVIERNDV---CVVCRNEKVVIRAVKGEMTISTKGTALTDGANGDQVRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V + V
Sbjct: 227 NDKSQRIIEGIVTGVAEITV 246
>gi|115283110|gb|ABI88627.1| flagellar protein FlgA [Burkholderia ambifaria AMMD]
Length = 436
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + VG
Sbjct: 300 WTVYLQAKVAVQA----TYYVAARQIAPGEPLTVADLVARDGDLTVLPLAVITDPAQAVG 355
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G AL++A+ G I V+
Sbjct: 356 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSIRVR 415
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 416 -MAAGQIVTAIVKDAGTVEI 434
>gi|154253002|ref|YP_001413826.1| flagellar basal body P-ring biosynthesis protein FlgA [Parvibaculum
lavamentivorans DS-1]
gi|154156952|gb|ABS64169.1| SAF domain protein [Parvibaculum lavamentivorans DS-1]
Length = 326
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 59/135 (43%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ A + V + G+++ + +++ + + N SI +VG+ R
Sbjct: 176 RVTGRAYPVLDVPVLVRDMQPGDIVRHQDIDWVRMPANRVSQNMIASIDHLVGMSPRHPA 235
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ LS + P V+ + A+V + G +T++ G AL ++GD++ V NI +
Sbjct: 236 RAGEPLRLSDMQPPLVVEKNAQVDMTFVSGALTLTARGRALQSGAVGDIVNVLNIRSNRT 295
Query: 137 VSGSVVDTGTVRVVV 151
V G V +R+
Sbjct: 296 VQGIVTGPNLIRIDA 310
>gi|95929875|ref|ZP_01312616.1| Flageller protein FlgA [Desulfuromonas acetoxidans DSM 684]
gi|95134171|gb|EAT15829.1| Flageller protein FlgA [Desulfuromonas acetoxidans DSM 684]
Length = 243
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 1/147 (0%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
V + + V VV + G +++ + + + S IR
Sbjct: 96 TVVYRVDGRTVKSVTVRGKLLVKADVVVAQQSLKRGTIISAEDVSLVHLDVSRIREPIF- 154
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+K+VVG + R + + + P ++ +G+ V+++ + M ++ GIAL D S
Sbjct: 155 DLKNVVGKLVARNVRAGQPVEFKSVETPPLVHKGSFVKLVARRSGMMLTAIGIALEDGSK 214
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G+VI V+N + +V VV V V
Sbjct: 215 GEVIRVQNNRSKKVVMAQVVGPDLVEV 241
>gi|292487935|ref|YP_003530810.1| flagella basal body P-ring formation protein FlgA [Erwinia
amylovora CFBP1430]
gi|292899154|ref|YP_003538523.1| flagella basal body P-ring formation protein [Erwinia amylovora
ATCC 49946]
gi|291199002|emb|CBJ46113.1| flagella basal body P-ring formation protein [Erwinia amylovora
ATCC 49946]
gi|291553357|emb|CBA20402.1| Flagella basal body P-ring formation protein flgA precursor
[Erwinia amylovora CFBP1430]
Length = 222
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ V G +V + ++ GE ++ S ++ + + D G + R ++
Sbjct: 90 IQVQLQVTGSYLVANRQLSQGEAISASDVRIEHGRLDALPARTLLNSDDATGAIVLRAIM 149
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + + ++ +P+ + G V + + TI + G A+++A+ + V+ +++G +V
Sbjct: 150 PGQPVTMMMMRQPWRVKAGQAVTVYASGEGFTIHSEGKAMNNAAAMQSVRVR-MNSGQIV 208
Query: 138 SGSVVDTGTVRVVV 151
+G + G + + +
Sbjct: 209 TGKIDADGNILISL 222
>gi|120597301|ref|YP_961875.1| SAF domain-containing protein [Shewanella sp. W3-18-1]
gi|146294554|ref|YP_001184978.1| SAF domain-containing protein [Shewanella putrefaciens CN-32]
gi|120557394|gb|ABM23321.1| SAF domain [Shewanella sp. W3-18-1]
gi|145566244|gb|ABP77179.1| SAF domain [Shewanella putrefaciens CN-32]
Length = 245
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+SLYV + L A + V S + EV+ L+ + + + K ++
Sbjct: 108 WSLYVRAKVDLSAYI----PVTSKTLERDEVVTAENLQWKMLPLTASDQDIITDEKHILD 163
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R + + I + L P+++S G +V I + G+A+ GD I V+
Sbjct: 164 QAVARKIRKNKPIRTNNLSAPWLVSIGEEVIIEAASATFYANMLGVAMDAGKQGDAIRVR 223
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N +G +++ V G V+
Sbjct: 224 NTSSGKIITAYPVAKGRVQTR 244
>gi|68164554|gb|AAY87283.1| predicted flagellar basal body P-ring biosynthesis protein
[uncultured bacterium BAC17H8]
Length = 276
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
V + ++ +++ L + V+ N G + DV G + L +
Sbjct: 151 EVVALARSVSRNDMIAREDLIMVPVSARNAFGAFF-DPADVAGRRLKMGLSARKPLMARH 209
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
L+ Y++ G +V I + G ++I+ G AL + I + I V+N +G + +
Sbjct: 210 LYPDYLVEEGNEVLITSSSGGISINMVGYALENGQISEWIGVENASSGKTIRAKITGEKK 269
Query: 147 VRVVVK 152
V V+ K
Sbjct: 270 VTVIAK 275
>gi|261339372|ref|ZP_05967230.1| flagella basal body P-ring formation protein FlgA [Enterobacter
cancerogenus ATCC 35316]
gi|288318173|gb|EFC57111.1| flagella basal body P-ring formation protein FlgA [Enterobacter
cancerogenus ATCC 35316]
Length = 219
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV + I G L S + + + I V+ R +
Sbjct: 87 LQVAVQATGNYVVAAQPIVRGSQLQASSVTLKRGRLDQLPPRTMLDINQAQDAVSLRDVA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I LS++ + + + G +V ++ +I + G AL++A++ V+ + +G +V
Sbjct: 147 PGQPIQLSMIRQAWRVKAGQQVMVVANGDGFSIKSEGKALNNAAVAQNARVR-MSSGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 206 SGTVGSDGNILINL 219
>gi|121534937|ref|ZP_01666756.1| SAF domain [Thermosinus carboxydivorans Nor1]
gi|121306536|gb|EAX47459.1| SAF domain [Thermosinus carboxydivorans Nor1]
Length = 245
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 68/149 (45%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
V + L + L + +V + I A E+L L+ + + Y
Sbjct: 93 TVNVQVDGRLVAAATVKLDIKLYREILVAARPIAAWEILTADSLQRERRDVGKLASGYIT 152
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ V+GL RR L P VI SVL +P +I RG + II G + + AG AL D +
Sbjct: 153 DEQKVLGLAARRSLTPGAVITDSVLAKPVLIRRGQLIAIIARSGGIEVVAAGQALQDGAE 212
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G VI V+NI + ++S V+D + V+
Sbjct: 213 GQVIRVQNIQSKKILSAQVLDNASALVLT 241
>gi|88858149|ref|ZP_01132791.1| putative flagellar biosynthesis; assembly of basal-body periplasmic
P-ring [Pseudoalteromonas tunicata D2]
gi|88819766|gb|EAR29579.1| putative flagellar biosynthesis; assembly of basal-body periplasmic
P-ring [Pseudoalteromonas tunicata D2]
Length = 235
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + + V+ I G+++ + +R IK ++G R +
Sbjct: 105 VQVRTTELAEIVITQNPIAKGQLITAQDIVTEMRPTHLVRNQNIDDIKMLIGSRATRSIR 164
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ I L+ + +I +G KV I Q N+ I T G AL + +G+ I+V+N +G +
Sbjct: 165 AGNPINLNQI---CMICKGDKVTIYAKQPNLVIKTNGEALENGLLGENISVQNSKSGKKI 221
Query: 138 SGSVVDTGTVRVVV 151
V++T V V +
Sbjct: 222 QAQVMNTNDVIVNL 235
>gi|28900118|ref|NP_799773.1| flagellar basal body P-ring biosynthesis protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|28808401|dbj|BAC61606.1| LfgA [Vibrio parahaemolyticus RIMD 2210633]
Length = 235
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ +SV VV + + EV+ + LK T S ++ + K +GL T R
Sbjct: 100 RINVTIKSSVTLPVVVAATTVGRSEVVTANHLKLETRTISR-SDDFYTAPKHAIGLETTR 158
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G
Sbjct: 159 RLRAGQVVDPTSLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSG 218
Query: 135 VMVSGSVVDTGTV 147
++ V V
Sbjct: 219 RVIRAVVTGRNQV 231
>gi|297570290|ref|YP_003691634.1| flagella basal body P-ring formation protein FlgA [Desulfurivibrio
alkaliphilus AHT2]
gi|296926205|gb|ADH87015.1| flagella basal body P-ring formation protein FlgA [Desulfurivibrio
alkaliphilus AHT2]
Length = 247
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 64/145 (44%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
V L+ + +G V+ + IN GEV++ L + + G+ +
Sbjct: 100 VTLLVNGKAEARVRLNANLQRMGQVVMTARRINRGEVISRDDLVVHRRDIGMLDGSIIND 159
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
V G+ R L ++ ++L +P ++ RG +V I + G + ++ G + G
Sbjct: 160 PALVAGMQLRTTLQAGAIVYQNLLEKPPLVRRGDRVTIRASTGRVLVNAPGEVREIGAEG 219
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVR 148
D++ V+N+ + + VV++G V
Sbjct: 220 DLVRVRNLMSRREIMARVVNSGLVE 244
>gi|291617016|ref|YP_003519758.1| FlgA [Pantoea ananatis LMG 20103]
gi|291152046|gb|ADD76630.1| FlgA [Pantoea ananatis LMG 20103]
Length = 219
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ V G +V + +I G +++ + N+ + + V V R +
Sbjct: 87 IQVQVQVTGDYLVATKLIARGSTVSKEDFRIENGRLDNLPPRTLFTDESVADSVVLRDIQ 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + S+L +P+ + G V ++ + S G AL++ +I + V+ + G +V
Sbjct: 147 PGQPVSQSMLRQPWRVKAGQDVMVVASGDGFDASGEGKALNNGTISQWVRVR-MGNGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V D G + + +
Sbjct: 206 SGRVSDDGKILITL 219
>gi|237653587|ref|YP_002889901.1| flagella basal body P-ring formation protein FlgA [Thauera sp.
MZ1T]
gi|237624834|gb|ACR01524.1| flagella basal body P-ring formation protein FlgA [Thauera sp.
MZ1T]
Length = 242
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ ++ Y+ + ++ A ++ + + AG+VL + L + + + + N
Sbjct: 103 PVTWTAYLQARVAVVA----DYLIAARPLRAGQVLGPADLGQRRGDLTALPDNLLTDPTQ 158
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
G TR + + +L P+ + +G V ++ +++ G A+++A+ G+ +
Sbjct: 159 ASGHHTRIAVAAGSPLRGDMLRVPHAVRQGQTVSVLGVGAGFRVASEGRAMNNAAPGEKV 218
Query: 127 AVKNIDTGVMVSGSVVDTGTV 147
V+ + G +V+G+ G V
Sbjct: 219 RVR-LADGQVVTGTAQAGGAV 238
>gi|308126103|ref|ZP_05907780.2| flagella basal body P-ring formation protein FlgA [Vibrio
parahaemolyticus AQ4037]
gi|308109249|gb|EFO46789.1| flagella basal body P-ring formation protein FlgA [Vibrio
parahaemolyticus AQ4037]
Length = 181
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ +SV VV + + EV+ + LK T S ++ K +GL T R
Sbjct: 46 RINVTIKSSVTLPVVVAATTVGRSEVVTANHLKLETRTISR-SDDFYTDPKHAIGLETTR 104
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G
Sbjct: 105 RLRAGQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSG 164
Query: 135 VMVSGSVVDTGTV 147
++ V V
Sbjct: 165 RVIRAVVTGRNQV 177
>gi|331671800|ref|ZP_08372596.1| SAF domain protein [Escherichia coli TA280]
gi|331070789|gb|EGI42148.1| SAF domain protein [Escherichia coli TA280]
Length = 252
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 61/151 (40%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
++ + F + ++ V+ V+ V+ L + ++ S R N
Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSVVARDTPLTANDVELKPYNVSAQRRNV 159
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
D +G ++ L P I L P ++ R V I+ +T S G+AL +
Sbjct: 160 LMDPDDAIGFSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQSAGITASMPGVALKNG 219
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+++ V+N + ++S V ++G V V
Sbjct: 220 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 250
>gi|328470097|gb|EGF41008.1| flagellar basal body P-ring biosynthesis protein [Vibrio
parahaemolyticus 10329]
Length = 181
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ +SV VV + + EV+ + LK T S ++ K +GL T R
Sbjct: 46 RINVTIKSSVTLPVVVAATTVGRSEVVTANHLKLETRTISR-SDDFYTDPKHAIGLETTR 104
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G
Sbjct: 105 RLRAGQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAKGQQIEVENLSSG 164
Query: 135 VMVSGSVVDTGTV 147
++ V V
Sbjct: 165 RVIRAVVTGRNQV 177
>gi|302343758|ref|YP_003808287.1| flagella basal body P-ring formation protein FlgA [Desulfarculus
baarsii DSM 2075]
gi|301640371|gb|ADK85693.1| flagella basal body P-ring formation protein FlgA [Desulfarculus
baarsii DSM 2075]
Length = 321
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 54/146 (36%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
V ++ + V V S + +++ ++ ++ + +
Sbjct: 174 VEVVVDGQKVKQARIVGDIDVYAPVAVASRSLARRQIIGPDDVELARINLAEAPRDVVTE 233
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
V+G+ TR + + + + +I RG V I+ M IST G A G
Sbjct: 234 PDQVIGMRTRGAVGMGQPLDMRWVEPAPLIQRGEIVNILAKAPGMRISTKGRAEETGFRG 293
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
VI + N+ T V+G V G V V
Sbjct: 294 KVIRLTNLATKRTVNGRVNAPGEVIV 319
>gi|262166287|ref|ZP_06034024.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
VM223]
gi|262170819|ref|ZP_06038497.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
MB-451]
gi|261891895|gb|EEY37881.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
MB-451]
gi|262026003|gb|EEY44671.1| flagellar basal-body P-ring formation protein FlgA [Vibrio mimicus
VM223]
Length = 247
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + + + + ++ G++++ + V R + + V+G
Sbjct: 113 WRIYVPVRLT----ITIPLITAAAPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPETVIG 168
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ + VI S + ++ R V I + M+I+T G A+SD +G+ I VK
Sbjct: 169 AKIKKNVRVGDVIEQSDV---CIVCRNESVVIKAVRSGMSITTKGTAMSDGVLGEQIKVK 225
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ V G V V
Sbjct: 226 NDKSNRIIDAQVSGVGEVTV 245
>gi|78485818|ref|YP_391743.1| flageller protein FlgA [Thiomicrospira crunogena XCL-2]
gi|78364104|gb|ABB42069.1| Flageller basal body P-ring formation protein FlgA [Thiomicrospira
crunogena XCL-2]
Length = 245
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 4/140 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV +L VV + I V+++ +K++ V + + +G
Sbjct: 109 WKVYVTALVEGDV----PVVVTTKAILKQAVIHKEDVKQILVPYQKSKTGALIDVDSAIG 164
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ +R L P+ ++ + L PY++ V II GN+ + + G AL D + V+
Sbjct: 165 MRAKRGLSPNSILTVRQLQPPYLVLEDNNVTIITYIGNIKVKSLGKALEDGVKNQQVPVE 224
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N+ + ++ G V+ TV V
Sbjct: 225 NLSSKKIIKGIVIAPNTVLV 244
>gi|71906387|ref|YP_283974.1| flagellar basal body P-ring biosynthesis protein FlgA
[Dechloromonas aromatica RCB]
gi|71846008|gb|AAZ45504.1| flagellar protein FlgA [Dechloromonas aromatica RCB]
Length = 225
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
L + +V G+ V + + AG+++ + M S + VG R
Sbjct: 90 SVLVPVQIAVTGNYVTTTRPLAAGQLVQPGDIATMSGDLSQLPTGIVTDPTSAVGKTLRN 149
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L + L VI +G VR+I +S+ G A+++A+ G V V+ + +G
Sbjct: 150 SLGAGQPLRSDQLLPTLVIRQGQSVRVISQGAGFAVSSEGKAINNAAEGQVAQVR-MPSG 208
Query: 135 VMVSGSVVDTGTVRV 149
+SG G+V V
Sbjct: 209 QTLSGIAKADGSVEV 223
>gi|37525837|ref|NP_929181.1| flagella basal body P-ring formation protein FlgA precursor
[Photorhabdus luminescens subsp. laumondii TTO1]
gi|36785266|emb|CAE14207.1| Flagella basal body P-ring formation protein FlgA precursor
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 219
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ SV G+ +V I+ +VL++ + + + + + ++ + R +
Sbjct: 86 FIQVAVSVTGNYLVTRRAISRNDVLSDKDFQVRRGLLERLPHDLVINKNEIKNSIAIRNI 145
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
I ++L RP+V+ G V +I+ I G A+++A+I D + V+ I++G +
Sbjct: 146 PAGQAITHNMLRRPWVVRSGQSVAVIIQGNGFQIRNEGKAINNAAISDKVRVR-INSGHV 204
Query: 137 VSGSVVDTGTVRVVV 151
++G ++ G V++++
Sbjct: 205 ITGQALENGNVKIML 219
>gi|300936121|ref|ZP_07151060.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 21-1]
gi|300458699|gb|EFK22192.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 21-1]
Length = 252
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 59/151 (39%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
++ + F + ++ V+ V+ ++ L + ++ S
Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQHREV 159
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
D +G ++ L P I L P ++ R V I+ ++ S G+AL +
Sbjct: 160 LMEPNDAIGFSSKHALQPGRPITKEELISPVLVERDQPVMIVYQSAGISASMPGVALKNG 219
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+++ V+N + ++S V ++G V V
Sbjct: 220 RKGEMVKVRNASSQRVISARVAESGVVTTVS 250
>gi|153837099|ref|ZP_01989766.1| flagella basal body P-ring formation protein FlgA [Vibrio
parahaemolyticus AQ3810]
gi|149749687|gb|EDM60432.1| flagella basal body P-ring formation protein FlgA [Vibrio
parahaemolyticus AQ3810]
Length = 179
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ +SV VV + + EV+ + LK T S ++ K +GL T R
Sbjct: 44 RINVTIKSSVTLPVVVATTTVGRSEVVTANHLKLETRTISR-SDDFYTDPKHAIGLETTR 102
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L V+ + L P +I +G ++ II ++ + ST G+AL D + G I V+N+ +G
Sbjct: 103 RLRAGQVVDPTNLSAPALIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSG 162
Query: 135 VMVSGSVVDTGTV 147
++ V V
Sbjct: 163 RVIRAVVTGRNQV 175
>gi|157371211|ref|YP_001479200.1| SAF domain-containing protein [Serratia proteamaculans 568]
gi|157322975|gb|ABV42072.1| SAF domain protein [Serratia proteamaculans 568]
Length = 217
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
V G +V + I+AG L + +K + +G V+ R +
Sbjct: 84 FIQTQVQVTGKYLVSARGISAGSKLTAADIKLKTGRLDTLPPRTLTEAGKALGAVSLRNI 143
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P + L++L R + + G V++ IS +G A+++A+ D + V+ + +G +
Sbjct: 144 SPGQPLNLAMLRRAWAVKAGQAVQVTAQGDGFNISGSGKAMNNAATEDSVRVR-MASGQI 202
Query: 137 VSGSVVDTGTVRVVV 151
V+G V D G +R+ +
Sbjct: 203 VNGIVGDDGAIRITL 217
>gi|293395579|ref|ZP_06639862.1| flagella basal body P-ring formation protein FlgA [Serratia
odorifera DSM 4582]
gi|291421898|gb|EFE95144.1| flagella basal body P-ring formation protein FlgA [Serratia
odorifera DSM 4582]
Length = 217
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
S V+G +V + I+AG +L + + + + +G V+ R
Sbjct: 82 RSFIQTQVQVVGRYLVSARSISAGSILTAADVTLKTGRLDTLPPRMLVDSRRALGAVSLR 141
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L P + LS+L R +VI G V++ +IS AG A+++A+ D + V+ + +G
Sbjct: 142 NLGPGQPLTLSMLRRAWVIKAGQPVQVTAQGEGFSISGAGKAMNNAAADDRVRVR-MSSG 200
Query: 135 VMVSGSVVDTGTVRVVV 151
+VSG D G +RV +
Sbjct: 201 QIVSGIAGDDGAIRVTL 217
>gi|262404546|ref|ZP_06081101.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
RC586]
gi|262349578|gb|EEY98716.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
RC586]
Length = 255
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + + + + ++ G++++ + V R + V+G
Sbjct: 121 WRIYVPVRLT----ITIPLLTAANPLSRGQMISIQDVTISMVDLLRFRRQGFSTPDTVIG 176
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ + VI S + ++ R V I + M+I+T G A+SD IG+ I VK
Sbjct: 177 AKIKKNVRVGDVIEQSDV---CIVCRNESVVIKAGRSGMSITTKGTAMSDGVIGEQIKVK 233
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ V G V V
Sbjct: 234 NDKSNRIIDAQVSGVGEVTV 253
>gi|238919255|ref|YP_002932770.1| flagella basal body P-ring formation protein FlgA, [Edwardsiella
ictaluri 93-146]
gi|238868824|gb|ACR68535.1| flagella basal body P-ring formation protein FlgA, putative
[Edwardsiella ictaluri 93-146]
Length = 223
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
V G V + G+ L ++L+ + ++ I + G T R +
Sbjct: 95 VQVTGSYPVAIHALPRGQNLTAAQLRLTRGRLDSLPPGTILDIARLSGATTLRSIGAGQP 154
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
I ++L R +VI G +V+I+ +S+ G A+++A++ DV+ V+ +G ++SG
Sbjct: 155 IAATMLRRTWVIRAGQQVQILAQGDGFNVSSEGRAMNNAALADVVQVR-TASGQVISGKA 213
Query: 142 VDTGTVRVVV 151
GT+ +V+
Sbjct: 214 SGPGTLTLVL 223
>gi|21113068|gb|AAM41243.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66573877|gb|AAY49287.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 281
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I +GE ++ + + + + I G
Sbjct: 132 NTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGITSGETISLADISIEKRDAARIVGAVL 191
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RR+L ++ + L P ++ RG V ++ G + + +G ALSDA
Sbjct: 192 ADPATAVGKTARRILPAGTLLSANDLVTPRLVRRGDTVPLVSRNGGLEVRMSGRALSDAG 251
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 252 ENERVSVENSSSRRVVQGIVEASGTVVV 279
>gi|307311558|ref|ZP_07591199.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium
meliloti BL225C]
gi|307318913|ref|ZP_07598344.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium
meliloti AK83]
gi|306895327|gb|EFN26082.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium
meliloti AK83]
gi|306899575|gb|EFN30204.1| flagella basal body P-ring formation protein FlgA [Sinorhizobium
meliloti BL225C]
Length = 157
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 62/148 (41%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Query: 7 LLFFSLYVLSLDSLFASVIGH--AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
+ F+ L S A++ AV+P I GE L+ S L+ + VTN ++R Y SI
Sbjct: 10 AVLFAAMASCLLSPAAALAEPPTAVIPKQTIYPGEKLDASMLEVVDVTNPDLRDGYVRSI 69
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
+V G+VT+R LLP VI S L Y + RG+ VR++ G +TI+ AG L DA++GD
Sbjct: 70 DEVDGMVTKRTLLPGRVILASALREQYAVERGSTVRLVFNNGGLTITAAGSPLQDAAVGD 129
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
+I V+N+DTGV+VSG+V+ T+ VV K
Sbjct: 130 LIRVRNVDTGVIVSGTVMADSTIHVVAK 157
>gi|46578929|ref|YP_009737.1| FlgA family protein [Desulfovibrio vulgaris str. Hildenborough]
gi|46448341|gb|AAS94996.1| FlgA family protein [Desulfovibrio vulgaris str. Hildenborough]
Length = 310
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 5/151 (3%)
Query: 3 CVRFLLF---FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
+RF + ++ + F V + +N G+ L ++ M+ +++R
Sbjct: 162 SLRFAVLEMDGAVVRRFTGTAFLDVWLTVPCAAQPLNRGDRLEVEKVTWMRKNIAHLRAA 221
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
+R + V+ + ++RG V ++ + ++ G AL+D
Sbjct: 222 PWDGRGGP--WQLQRPVGAGQVVYQDDVAPNPAVTRGGIVTLVYESPALRLAVQGEALAD 279
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
G+ I V+N+ + V +V D TV V
Sbjct: 280 GMPGETIQVRNLQSRKQVYATVRDGSTVVVR 310
>gi|170682474|ref|YP_001742369.1| lateral flagellar P-ring addition protein LfgA [Escherichia coli
SMS-3-5]
gi|170520192|gb|ACB18370.1| lateral flagellar P-ring addition protein LfgA [Escherichia coli
SMS-3-5]
Length = 245
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 64/151 (42%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
++ + F + ++ V+ V+ ++ L + ++ S R +
Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRDV 152
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ D +GL ++ L P I L P ++ R V I+ +T S G+AL +
Sbjct: 153 LMELDDAIGLSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQSAGITASMPGVALKNG 212
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+++ V+N+ + ++S V ++G V V
Sbjct: 213 RKGEMVKVRNVSSQRVISARVAESGVVTTVS 243
>gi|297183132|gb|ADI19275.1| flagellar basal body p-ring biosynthesis protein [uncultured delta
proteobacterium HF0200_39L23]
Length = 227
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 66/146 (45%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ F + + + ++ I ++ E+ + +++ + Y
Sbjct: 81 IEFSVDGKSIRKVPVRTYIKLYKDVLIAKDTIKEDHIIREADILKVRRNVDRMPSAYVTD 140
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+D++G + R + P+ VI + + VI G ++ I+ N+ ++ GI+L ++G
Sbjct: 141 EEDILGKIASRAINPNEVIQETNVSAVPVIKSGDRLMIVFETQNLRLTAPGISLQKGALG 200
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
D I V+N+ + ++V ++ D V+V
Sbjct: 201 DRIRVRNLQSKILVYATIEDRNHVQV 226
>gi|257140552|ref|ZP_05588814.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
thailandensis E264]
gi|284159417|ref|YP_440797.3| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
thailandensis E264]
gi|83652486|gb|ABC36549.1| FlgA family protein [Burkholderia thailandensis E264]
Length = 538
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 402 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTMLPLAVITDAQQAVG 457
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIST G L++A+ G + V+
Sbjct: 458 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGHGFTISTEGSVLNNAAPGQQVRVR 517
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 518 -MAAGQIVTAIVKDAATVEI 536
>gi|264676566|ref|YP_003276472.1| flagellar protein FlgA [Comamonas testosteroni CNB-2]
gi|299531290|ref|ZP_07044700.1| SAF domain-containing protein [Comamonas testosteroni S44]
gi|262207078|gb|ACY31176.1| flagellar protein FlgA [Comamonas testosteroni CNB-2]
gi|298720697|gb|EFI61644.1| SAF domain-containing protein [Comamonas testosteroni S44]
Length = 252
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ CV+ + +++++ + G A V I AG+ L+ +V +
Sbjct: 108 LRCVQGSVPWNVFLPITVRAY----GPAWVAQGNIPAGKTLSAEDAAPAEVDWAEDSAPV 163
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ +D +G+V R L + +++ P + + G+ V++++ G +++ +G A++ A
Sbjct: 164 FANAQDFIGMVAARPLTSGQALRQNMVRPPALFTAGSPVQVMVNGGGFSVAGSGKAMTAA 223
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G + V+ +D G +V+G+V +G V V
Sbjct: 224 GEGQQVRVR-MDNGRLVTGTVNASGVVLV 251
>gi|163758016|ref|ZP_02165104.1| flagellar basal body P-ring biosynthesis protein A [Hoeflea
phototrophica DFL-43]
gi|162284305|gb|EDQ34588.1| flagellar basal body P-ring biosynthesis protein A [Hoeflea
phototrophica DFL-43]
Length = 160
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 77/127 (60%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
G AVVP I GE L+ ++E+ VTN N+RG Y + V+G VT R LLP IP
Sbjct: 34 GTAVVPERTIYPGEELSAELVREVTVTNPNLRGGYVTTTTGVLGKVTTRTLLPGRTIPAG 93
Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
VL + + RG V ++ + +TI+ AG L + ++GD I V+NI++GV VSG+V+ G
Sbjct: 94 VLRDAWAVERGTTVELVFSGKGLTITAAGTPLQNGAVGDFIRVRNIESGVTVSGTVMADG 153
Query: 146 TVRVVVK 152
T++V K
Sbjct: 154 TIQVAPK 160
>gi|269138578|ref|YP_003295278.1| flagellar basal body P-ring biosynthesis protein [Edwardsiella
tarda EIB202]
gi|267984238|gb|ACY84067.1| flagellar basal body P-ring biosynthesis protein [Edwardsiella
tarda EIB202]
Length = 249
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
V G V ++ G+ L ++L+ + ++ I + G R +
Sbjct: 121 VQVTGSYPVAIHALSRGQNLTPAQLRLTRGRLDSLPPGTILDIARLSGATMLRSIGAGQP 180
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
I ++L R +VI G +V+I+ +S+ G A+++A++ DV+ + +G ++SG
Sbjct: 181 IAATMLRRTWVIRAGQQVQILAQGDGFNVSSEGRAMNNAALADVVRAR-TASGQVISGKA 239
Query: 142 VDTGTVRVVV 151
GT+ +V+
Sbjct: 240 SGPGTLTLVL 249
>gi|120603470|ref|YP_967870.1| FlgA family protein [Desulfovibrio vulgaris DP4]
gi|120563699|gb|ABM29443.1| FlgA family protein [Desulfovibrio vulgaris DP4]
gi|311232787|gb|ADP85641.1| flagellar basal body P-ring formation protein FlgA [Desulfovibrio
vulgaris RCH1]
Length = 324
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 5/151 (3%)
Query: 3 CVRFLLF---FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
+RF + ++ + F V + +N G+ L ++ M+ +++R
Sbjct: 176 SLRFAVLEMDGAVVRRFTGTAFLDVWLTVPCAAQPLNRGDRLEVEKVTWMRKNIAHLRAA 235
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
+R + V+ + ++RG V ++ + ++ G AL+D
Sbjct: 236 PWDGRGGP--WQLQRPVGAGQVVYQDDVAPNPAVTRGGIVTLVYESPALRLAVQGEALAD 293
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
G+ I V+N+ + V +V D TV V
Sbjct: 294 GMPGETIQVRNLQSRKQVYATVRDGSTVVVR 324
>gi|90410999|ref|ZP_01219013.1| flagellar basal body P-ring biosynthesis protein [Photobacterium
profundum 3TCK]
gi|90328212|gb|EAS44523.1| flagellar basal body P-ring biosynthesis protein [Photobacterium
profundum 3TCK]
Length = 235
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV L VV + + G VLN S L V + RG +++G
Sbjct: 101 WQVYVPVRIQLLLPR----VVAATPLARGLVLNASHLSVKLVESRFQRGIVFEHPTEIIG 156
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + + + + ++ R V I G + + T G ALSD ++G+ I V+
Sbjct: 157 SKVKRTIKMGEAVQGNDI---CLVCRNDAVIIKAGNGGLNVITNGTALSDGALGEQIRVQ 213
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V G V V
Sbjct: 214 NTKSKRIIDGIVSAVGEVTV 233
>gi|293604999|ref|ZP_06687395.1| flagella basal body P-ring formation protein FlgA [Achromobacter
piechaudii ATCC 43553]
gi|292816604|gb|EFF75689.1| flagella basal body P-ring formation protein FlgA [Achromobacter
piechaudii ATCC 43553]
Length = 238
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++ YV + SV G+ V S +I+AG+ L L ++ + VVG
Sbjct: 102 WTTYVQATV----SVPGYYYVASRMISAGQALTPDDLAPRDGDLVSLPPGAITDPQAVVG 157
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + + S L + RGA VRI +S+ G AL +A+ G V+ V+
Sbjct: 158 MSAAFRINAGQPVRSSSLRNAQSVMRGANVRINARGNGFVVSSEGQALDNAAPGAVVQVR 217
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
+G +VSG V + G V + +
Sbjct: 218 -TASGQVVSGVVRNAGLVEIQL 238
>gi|316932822|ref|YP_004107804.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas
palustris DX-1]
gi|315600536|gb|ADU43071.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas
palustris DX-1]
Length = 343
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 8/158 (5%)
Query: 1 MDCVRFLLF-----FSLYVLSLDSLFASVIGHAV--VPSVVINAGEVLNESRLKEMQVTN 53
+ RF + S L + I V V + + EV+ S + +
Sbjct: 174 LRSGRFDVSYEIAGGSGAAPERLRLTGTAIETVVATVLTRPVQRNEVIKTSDIATERRPK 233
Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
S + + A +G+ R+ L ++ + L +P +++R V +I + ++
Sbjct: 234 SEVASDAASR-DGAIGMQARQPLRSGQILRNADLAKPDLVTRDQSVTLIYRTAGIYLTAR 292
Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G AL + GDV+ V N+ + ++G+V+ G V +
Sbjct: 293 GKALETGAEGDVVNVLNLQSKRTIAGTVIGRGQVSITA 330
>gi|167585189|ref|ZP_02377577.1| flagella basal body P-ring formation protein FlgA [Burkholderia
ubonensis Bu]
Length = 184
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A + I GEVL + L + + VG
Sbjct: 48 WTVYLQAKVTVQA----TYYAAARQIAPGEVLTAADLVARDGDLTLLPLAVITDPSQAVG 103
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G AL++A+ G + V+
Sbjct: 104 STALARVAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR 163
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 164 -MAAGQIVTAIVKDAGTVEI 182
>gi|162389965|ref|YP_774961.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
ambifaria AMMD]
Length = 315
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + VG
Sbjct: 179 WTVYLQAKVAVQA----TYYVAARQIAPGEPLTVADLVARDGDLTVLPLAVITDPAQAVG 234
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G AL++A+ G I V+
Sbjct: 235 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSIRVR 294
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 295 -MAAGQIVTAIVKDAGTVEI 313
>gi|50120635|ref|YP_049802.1| flagellar basal body P-ring biosynthesis protein FlgA
[Pectobacterium atrosepticum SCRI1043]
gi|49611161|emb|CAG74607.1| flagella basal body P-ring formation protein [Pectobacterium
atrosepticum SCRI1043]
Length = 222
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
V G+ V+ S IN G L E + + + +++ G V R L
Sbjct: 89 FIQTEVQVTGNYVISSRPINRGTALTEKDISLTKGRLDLLPLRPILTLQGAQGAVILRDL 148
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P VI S++ R +++ G V+II TI+ G A+++A+ G + V+ G +
Sbjct: 149 TPGQVITTSMIRRAWIVKAGQSVQIIAQGEGFTINGEGKAMNNAAAGQAVRVR-TANGQI 207
Query: 137 VSGSVVDTGTVRV 149
+SG + G + +
Sbjct: 208 ISGITNEDGIILI 220
>gi|78221653|ref|YP_383400.1| flageller protein FlgA [Geobacter metallireducens GS-15]
gi|78192908|gb|ABB30675.1| flagellar protein FlgA [Geobacter metallireducens GS-15]
Length = 236
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 59/132 (44%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ +G VV + G+V+ + + + S + G S +V+G R +
Sbjct: 103 VPVEVEALGDTVVVLRALERGDVIGAADVTVQRRDLSTLTGRVYRSADEVIGKRARMPVR 162
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ + L + ++ G V I++ M ++ G A + + GD++ V+N+ + V
Sbjct: 163 ANMPLRGDQLEKVPLVKSGQLVTILVENQAMRLTATGKARGNGAEGDIVMVQNLGSLKEV 222
Query: 138 SGSVVDTGTVRV 149
V+D GTV+V
Sbjct: 223 PARVIDAGTVQV 234
>gi|227820859|ref|YP_002824829.1| flagellar basal body P-ring biosynthesis protein FlgA
[Sinorhizobium fredii NGR234]
gi|227339858|gb|ACP24076.1| SAF domain protein [Sinorhizobium fredii NGR234]
Length = 169
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/126 (44%), Positives = 81/126 (64%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
AV+P +I GE + S L+ + VTN ++ Y S+++V G VT+R LLP VI S
Sbjct: 44 TAVIPKQIIYPGETIEASMLEVVDVTNPDLADGYIGSLEEVEGKVTKRTLLPGRVILASA 103
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
L Y + RG+ VR+I G +TI+ AG L DA++G++I +NID+GV+VSG+V+ GT
Sbjct: 104 LRDRYAVERGSTVRLIFNNGGLTITAAGSPLEDAAVGELIRARNIDSGVIVSGTVMADGT 163
Query: 147 VRVVVK 152
V VV K
Sbjct: 164 VHVVAK 169
>gi|90577340|ref|ZP_01233151.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum
S14]
gi|90440426|gb|EAS65606.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum
S14]
Length = 247
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
+L +++ + +V +I+ E++ L + N + V+GL
Sbjct: 108 TLNWRLNATVYVQLTLPVMVARTLIHRDELITRGMLDSQMLQL-KAPKNIITDAEQVIGL 166
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
R + +I ++L +P++I++G +V I+ +G ST GIAL + + I V+N
Sbjct: 167 HAIRRIRQGQLITENLLKKPFLINKGDQVLIVAKKGKFEASTKGIALEHGKMHEQIRVEN 226
Query: 131 IDTGVMVSGSVVDTGTVRVV 150
T ++ V G V V
Sbjct: 227 TATQKVIHARVFAQGKVETV 246
>gi|323498426|ref|ZP_08103422.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
sinaloensis DSM 21326]
gi|323316499|gb|EGA69514.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
sinaloensis DSM 21326]
Length = 248
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + G V ++ G++++ + V R +I V+G
Sbjct: 114 WRVYVPVRLT----RTGPQVTLIAPLSRGQIISARDVTISMVDLQRYRRQGFSTIDAVIG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
T++ L +I + + V+ R V I + M I+T G+A++D S G+ I VK
Sbjct: 170 AKTKKNLRSGEIIEENDI---CVVCRNETVTIKAVKSGMVITTKGVAMTDGSHGEQIRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N + ++ G V V VV
Sbjct: 227 NSKSNRIIEGRVTGISEVTVV 247
>gi|304558587|gb|ADM41251.1| Flagellar basal-body P-ring formation protein FlgA [Edwardsiella
tarda FL6-60]
Length = 224
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
V G V ++ G+ L ++L+ + ++ I + G R +
Sbjct: 96 VQVTGSYPVAIHALSRGQNLTPAQLRLTRGRLDSLPPGTILDIARLSGATMLRSIGAGQP 155
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
I ++L R +VI G +V+I+ +S+ G A+++A++ DV+ + +G ++SG
Sbjct: 156 IAATMLRRTWVIRAGQQVQILAQGDGFNVSSEGRAMNNAALADVVRAR-TASGQVISGKA 214
Query: 142 VDTGTVRVVV 151
GT+ +V+
Sbjct: 215 SGPGTLTLVL 224
>gi|254504988|ref|ZP_05117139.1| SAF domain family [Labrenzia alexandrii DFL-11]
gi|222441059|gb|EEE47738.1| SAF domain family [Labrenzia alexandrii DFL-11]
Length = 326
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 5/147 (3%)
Query: 5 RFLLFFSLYV-----LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
F +F ++ V + A + +V + G+++ + L +++ +
Sbjct: 162 HFTVFATIAVEHGTRPLTVTGTAVEMIDVLVLGQPLKRGDIVQDGDLTTIRLPRLKVNTA 221
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
++VG R L P + P ++ RG KV + G M +++ AL++
Sbjct: 222 ALEDGTNIVGKAARVNLRPSQPLSHKDFEYPVLVERGDKVTVTYNVGAMNLTSRAKALTN 281
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ GDVI V N+ + +V +V G
Sbjct: 282 GAKGDVIDVMNLQSRRVVPATVTSRGQ 308
>gi|99082799|ref|YP_614953.1| flagellar basal body P-ring biosynthesis protein FlgA [Ruegeria sp.
TM1040]
gi|99039079|gb|ABF65691.1| Flagella basal body P-ring formation protein flgA precursor
[Ruegeria sp. TM1040]
Length = 138
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 4/132 (3%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
S + +VP I A EV+ L V S +++G R L
Sbjct: 10 ILFAQSALADILVPVRTIRAKEVITADDLVFKNVE----SPGALSSPNEIIGQEARIALY 65
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
I + P ++ R V++I G + I+T G +L + G++I V N+ + V
Sbjct: 66 ASRPIHAGDIGPPALVDRNDLVKLIFRHGGLEITTEGRSLGRGAKGELIRVMNLSSRTTV 125
Query: 138 SGSVVDTGTVRV 149
+G + G + V
Sbjct: 126 TGRIRADGNIEV 137
>gi|285018214|ref|YP_003375925.1| flagellar basal body p-ring biosynthesis protein [Xanthomonas
albilineans GPE PC73]
gi|283473432|emb|CBA15937.1| probable flagellar basal body p-ring biosynthesis protein
[Xanthomonas albilineans]
Length = 255
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 61/147 (41%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
V + + +V + + AGE + + + + + I G
Sbjct: 107 TVEVSCPRDAGWRLFVPVKVRRMQQVLVLARGLTAGETIGAADIVPEKRDAARIVGAVMT 166
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
VG + RR L ++ L L P ++ RG V ++ +G + + AG A+SDA
Sbjct: 167 DPAVAVGKLVRRTLPAGTLLSLGDLVSPRLVRRGDNVALVARKGGLEVRMAGRAMSDAGE 226
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ + V+N+ + +V G+V G V V
Sbjct: 227 NERVTVENLSSRRIVQGTVSQNGDVLV 253
>gi|242238965|ref|YP_002987146.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii
Ech703]
gi|242131022|gb|ACS85324.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii
Ech703]
Length = 234
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
VI VV + I + + + + + + +G VT R+L
Sbjct: 101 FLQADVQVIAPYVVAAKTIPTRHQIQADDIAVTRGRIDLLTTAPITTPAEAIGNVTTRML 160
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
I +L + I G V+++++ +I++ G AL +A++ D + V+ +D+G +
Sbjct: 161 GAGQAISAKMLRSAWAIKMGEPVQVVVSGTGFSINSEGKALENAAVNDKVRVR-MDSGQI 219
Query: 137 VSGSVVDTGTVRVV 150
+SG + G VR++
Sbjct: 220 ISGIAAEKGLVRII 233
>gi|227112517|ref|ZP_03826173.1| flagellar basal body P-ring biosynthesis protein FlgA
[Pectobacterium carotovorum subsp. brasiliensis PBR1692]
Length = 222
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
V G+ V + +IN G L E ++ + + ++ G V R L
Sbjct: 89 FIQTEVQVTGNYVTSARLINRGTTLTEKDIRLTKGRLDLLPLRPILTLPGAQGAVLLRDL 148
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P VI S++ R +V+ G V+II TI+ G A+++A+ G + V+ G +
Sbjct: 149 TPGQVITASMIRRAWVVKAGQSVQIIAQGEGFTINGEGKAMNNAAAGQAVRVR-TANGQI 207
Query: 137 VSGSVVDTGTVRV 149
VSG + G + +
Sbjct: 208 VSGITNEDGIILI 220
>gi|218703521|ref|YP_002411040.1| lateral flagellar P-ring addition FlgA-like protein [Escherichia
coli UMN026]
gi|293403351|ref|ZP_06647442.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|298378963|ref|ZP_06988844.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|300900365|ref|ZP_07118540.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 198-1]
gi|218430618|emb|CAR11484.1| Lateral flagellar P-ring addition protein (FlgA-like) [Escherichia
coli UMN026]
gi|291429204|gb|EFF02224.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|298280076|gb|EFI21580.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|300356121|gb|EFJ71991.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 198-1]
Length = 245
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 56/134 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ V+ V+ ++ L + ++ S R N D +G ++ L
Sbjct: 110 VAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRNVLMDPDDAIGFSSKHALQ 169
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I L P ++ R V I+ +T S G+AL + G+++ V+N + ++
Sbjct: 170 PGRPITKEELVSPVLVERDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVI 229
Query: 138 SGSVVDTGTVRVVV 151
S V ++G V V
Sbjct: 230 SAMVAESGVVTTVS 243
>gi|78047591|ref|YP_363766.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|78036021|emb|CAJ23712.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 252
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 61/148 (41%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I+AGE ++ + + + + I G
Sbjct: 103 NTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVL 162
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RRVL ++ + L ++ RG V ++ G + + +G ALSDA
Sbjct: 163 ADPVAAVGKTARRVLPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAG 222
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 223 ENERVSVENSSSRRVVQGIVEASGTVVV 250
>gi|330860611|emb|CBX70908.1| flagella basal body P-ring formation protein flgA [Yersinia
enterocolitica W22703]
Length = 161
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V V GH V + + AGE + +K Q + G V+
Sbjct: 25 VRRFIQTQVQVSGHYAVAARQLAAGEKMTLQDIKMKQGRLDTLPPGALLEPNFAQGAVSL 84
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R ++I G V+++ +++ G A+++A+I D + V+ + +
Sbjct: 85 RQINAGQPLTRNMLRRLWIIKAGQDVQVLALGEGFNVNSNGKAMNNAAIQDNVRVR-MAS 143
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG+V D GTV +++
Sbjct: 144 GQIVSGTVADDGTVHILL 161
>gi|238751758|ref|ZP_04613246.1| Flagella basal body P-ring formation protein flgA [Yersinia rohdei
ATCC 43380]
gi|238710029|gb|EEQ02259.1| Flagella basal body P-ring formation protein flgA [Yersinia rohdei
ATCC 43380]
Length = 224
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ V G+ V + + +G + + Q + G V+
Sbjct: 88 LRRFIQTQVQVSGYYAVAARQLASGAKITPQDIVMKQGRLDTLPPGALLEPNFAQGAVSL 147
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++L R +VI G V+++ +++ G A+++A+I D + V+ + +
Sbjct: 148 RQINAGQPLTRNMLRRQWVIKAGQDVQVLAQGEGFNVNSNGKAMNNAAIQDNVRVR-MAS 206
Query: 134 GVMVSGSVVDTGTVRVVV 151
G +VSG++ + G +R+++
Sbjct: 207 GQIVSGTLAEDGIIRIIL 224
>gi|161610400|ref|NP_883779.2| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
parapertussis 12822]
Length = 236
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 6/151 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ CV +++Y + SV G V + I G+ + + L +
Sbjct: 92 LRCVA-PRTWTVYAQATV----SVPGQYYVAARQIAPGKTIEAADLTTRDGDLVALPPGV 146
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
++G+ + I + L +SRG VRI +S+ G AL +A
Sbjct: 147 ITDAAAILGMRPAHRIAAGQPIKGAGLRSAESVSRGQSVRITARGNGFVVSSEGQALDNA 206
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ V+ +G +VSG V G V + +
Sbjct: 207 PPSATVQVR-TASGQVVSGIVQAAGLVEIQL 236
>gi|90579902|ref|ZP_01235710.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum
S14]
gi|90438787|gb|EAS63970.1| flagellar basal body P-ring biosynthesis protein [Vibrio angustum
S14]
Length = 235
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ LYV L VV SV + G V+ +L V + RGN +++G
Sbjct: 101 WQLYVPVNVQL----TLPKVVASVALGRGMVITRDKLSVQMVESRFQRGNSFEDPNEIIG 156
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + +I + ++ R V I G + I T G ALSD +IG+ I V+
Sbjct: 157 SKVKRSVKLGEMIQARDI---CLVCRNDTVIIRAGTGGLNIVTEGKALSDGAIGEEIRVQ 213
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + M+ + G V V
Sbjct: 214 NKTSRRMIDAIITAVGEVTV 233
>gi|260767775|ref|ZP_05876710.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
furnissii CIP 102972]
gi|260617284|gb|EEX42468.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
furnissii CIP 102972]
gi|315179393|gb|ADT86307.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
furnissii NCTC 11218]
Length = 218
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV +L V I G+++ + + V R S VVG
Sbjct: 84 WKVYVPVRLTL----TVPMVTALTPITRGQIITANDVTISMVDLLRFRRQGFSSQDLVVG 139
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
T++ L VI + + V+ R V I M+I+T G ALSD ++GD I VK
Sbjct: 140 AKTKKNLKLGDVIEQNDV---CVVCRNESVMIRAISAGMSITTKGTALSDGTLGDQIKVK 196
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V G V V
Sbjct: 197 NDKSNRIIDGKVSGIGEVTV 216
>gi|163794153|ref|ZP_02188126.1| flagellar biosynthesis protein R [alpha proteobacterium BAL199]
gi|159180767|gb|EDP65286.1| flagellar biosynthesis protein R [alpha proteobacterium BAL199]
Length = 324
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Query: 2 DCVRFLLFFSL----YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57
RF S+ + S + V GEV++E+ ++ ++V +
Sbjct: 164 RSNRFDATISVPGSQATPVVVSGRVEPMLSVPVLRNHAMPGEVISENDIQWLRVESRRAS 223
Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
N ++D++G RR + I L+ + +VI +G V I+L G MT++ A
Sbjct: 224 MNSVTRLEDLLGRTPRRPIAAGQPIRLTDVRPNFVIDKGDMVTIVLNSGTMTLTARAEAT 283
Query: 118 SDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
++GD+I V+N + M+ V GTV +
Sbjct: 284 QKGAVGDIIKVRNNHSRRMLEARVTGAGTVSI 315
>gi|254295810|ref|ZP_04963267.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 406e]
gi|157806317|gb|EDO83487.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 406e]
Length = 495
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 359 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 414
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 415 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 474
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 475 -MAAGQIVTAIVKDAATVEI 493
>gi|283784081|ref|YP_003363946.1| lateral flagellar P-ring addition protein [Citrobacter rodentium
ICC168]
gi|282947535|emb|CBG87087.1| lateral flagellar P-ring addition protein [Citrobacter rodentium
ICC168]
Length = 256
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 59/133 (44%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
++ V V+P +I V+ + + S R + + +G+ ++R
Sbjct: 118 VNVAVRPDVYVPVVMPKSLIARDTVITADDVLLKRYNVSGQRSGLLMDLNEAIGMTSKRP 177
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
L P + + L P ++ R V I+ G +T + G+AL + G+VI ++N +
Sbjct: 178 LQPGKPLNRAQLVAPVLVKRDQPVMIVSRLGGITAAMPGVALKNGRKGEVIKIRNAASQR 237
Query: 136 MVSGSVVDTGTVR 148
++SG V D G V
Sbjct: 238 IISGVVDDAGVVS 250
>gi|238028853|ref|YP_002913084.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
glumae BGR1]
gi|237878047|gb|ACR30380.1| Flagellar basal body P-ring formation protein FlgA [Burkholderia
glumae BGR1]
Length = 510
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++LY+ S V G+ V + + G+VL + L + + + VG
Sbjct: 374 WTLYLQSKI----EVQGNYYVAAHALAPGDVLTAADLVAHEGDLTMLPLAVITDPAQAVG 429
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + + +L ++ G VR++ +IS+ G +++A G + V+
Sbjct: 430 GTSLVRVAAGLPLRQDMLRSASSVTIGQTVRVVAAGQGFSISSEGSVMNNAGPGQQVRVR 489
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV V
Sbjct: 490 -LAAGQIVTAVVKDGNTVEV 508
>gi|253702431|ref|YP_003023620.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
M21]
gi|251777281|gb|ACT19862.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
M21]
Length = 246
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ + VV + + GEVL+ S L + S RG Y D VGL + L
Sbjct: 112 TVQVEVEALADMVVAARTLERGEVLSASDLAVAKRDLSLARGGYLKEPDDAVGLRVKTTL 171
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ + L + V+ G V I+ + ++ +G A + GDVI V+N+ +
Sbjct: 172 RANTPVRKDNLEKVPVVKSGQMVTILAENDVVRVTASGRAKGAGAPGDVITVQNLSSQKD 231
Query: 137 VSGSVVDTGTVRV 149
++ VVD TV+V
Sbjct: 232 IAARVVDAATVKV 244
>gi|118588712|ref|ZP_01546120.1| Flageller protein FlgA [Stappia aggregata IAM 12614]
gi|118438698|gb|EAV45331.1| Flageller protein FlgA [Stappia aggregata IAM 12614]
Length = 331
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 5 RFLLFFSLYV-----LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
RF + ++ V + + A+ + +V + G+++ E L ++ + +
Sbjct: 167 RFTIQATVAVEVGTEPLILTGVATEMVDVLVLVQPVRRGDIVREEDLNIIREARTKVPAG 226
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
++D+VG R L + + + + RP +I RG K+ + M +++ A+
Sbjct: 227 ALTEVEDIVGKQARTTLRANAPLSRNDVQRPILIERGEKITVTYVMPGMKLTSRAQAMDS 286
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ GDVI V N+ + +V ++ G VRV
Sbjct: 287 GAKGDVIDVMNLQSRRIVPATITSRGQVRV 316
>gi|315125980|ref|YP_004067983.1| flagellar basal body P-ring biosynthesis protein [Pseudoalteromonas
sp. SM9913]
gi|315014494|gb|ADT67832.1| flagellar basal body P-ring biosynthesis protein [Pseudoalteromonas
sp. SM9913]
Length = 253
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 60/138 (43%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
S S SV + V +N G+VLN+ L+ V R I +VG
Sbjct: 113 SPAWRFRASAKVSVWINLVAAKHTLNRGKVLNKQDLEYKSVDLGKHRHQGETGIDQLVGF 172
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
+R + VI L + Y+I++ + + +T + + IAL D +G+VI VKN
Sbjct: 173 TVKREIDKGTVISNRYLEKQYLINKNEHISLQITTATFSANVKAIALEDGQLGEVINVKN 232
Query: 131 IDTGVMVSGSVVDTGTVR 148
+ + +V G V+ G
Sbjct: 233 LSSKKVVQGRVIAQGVAE 250
>gi|296102912|ref|YP_003613058.1| flagella basal body P-ring formation protein FlgA [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057371|gb|ADF62109.1| flagella basal body P-ring formation protein FlgA [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 218
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV +V I G +L+ S + + + I V+ R +
Sbjct: 86 LQVAVQATGNYVVAAVPIARGSMLHASSVTLKRGRLDQLPPRTMLDINQAQDAVSLRDVA 145
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I LS+L + + + G +V ++ I++ G AL++A++ V+ + +G +V
Sbjct: 146 PGQPIQLSMLRQAWRVKAGQQVMVVANGDGFQINSEGKALNNAAVAQNARVR-MSSGQVV 204
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 205 SGTVDSDGNILINL 218
>gi|121607565|ref|YP_995372.1| SAF domain-containing protein [Verminephrobacter eiseniae EF01-2]
gi|121552205|gb|ABM56354.1| SAF domain [Verminephrobacter eiseniae EF01-2]
Length = 281
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ CV + +++++ + F G A V + + G +L E +V +
Sbjct: 136 LRCVAGVSAWNVFLPIAIAAF----GPAWVLTRNVAPGALLTAEDATEAEVDWAAEPAPV 191
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ G V R L V+ +++ P++ GA+V++ + + AG ALS
Sbjct: 192 LANPALWQGQVAARPLRAGQVLRQTMVRAPWLFPAGAQVKVQVLGPGYAVVAAGQALSAG 251
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTV 147
+ G ++ V+ +D G +VSG V GT+
Sbjct: 252 ATGQMVRVR-MDNGRIVSGMVNAAGTI 277
>gi|300722686|ref|YP_003711976.1| flagellar basal-body periplasmic P ring assembly protein
[Xenorhabdus nematophila ATCC 19061]
gi|297629193|emb|CBJ89789.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring
[Xenorhabdus nematophila ATCC 19061]
Length = 223
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ +VIG +V I+ VL E + + + + + K + + R +
Sbjct: 90 FIQAYVNVIGPYLVSKRTIHRSAVLTEKDFQIKTGSLDKLPNDIIRNRKAIQNGIAIRNI 149
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
I +++ RP+ I G V + + + + G A+++A+ D I V+ +++G +
Sbjct: 150 PAGQSITRNMIRRPWAIKAGQNVVVTVDGHHFQVRYEGKAINNAASFDNIRVR-LNSGQV 208
Query: 137 VSGSVVDTGTVRVVV 151
++G + G+V++++
Sbjct: 209 ITGEAQENGSVKMML 223
>gi|304438316|ref|ZP_07398257.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304368682|gb|EFM22366.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 254
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 62/148 (41%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ + L + +V H +V I E + + + +
Sbjct: 107 ITVYVDGVLQRRAACYYQVTVYDHVLVAMTDIRMDEAITPANAHVEESAVDTLPETTVTD 166
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ G V R + VI ++L P V++ G+ V ++ G +TI G+AL IG
Sbjct: 167 FDRLAGRVAGRYIRKGTVITPTLLAMPRVLTAGSPVTLVAENGGITIRAEGVALEAGRIG 226
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
VI V+N +G ++ G VVD TV+++
Sbjct: 227 YVIRVRNARSGKIMRGRVVDEKTVQIIA 254
>gi|89075488|ref|ZP_01161899.1| flagellar basal body P-ring biosynthesis protein [Photobacterium
sp. SKA34]
gi|89048760|gb|EAR54331.1| flagellar basal body P-ring biosynthesis protein [Photobacterium
sp. SKA34]
Length = 235
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+ LYV L VV SV + G V+ +L V + RGN +++
Sbjct: 100 SWQLYVPVNVQL----TLPKVVASVALGRGMVITRDKLSVQMVESRFQRGNSFEDPNEII 155
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G +R + +I + ++ R V I G + I T G ALSD +IG+ I V
Sbjct: 156 GSKVKRSVKLGEMIQARDI---CLVCRNDTVIIRAGTGGLNIVTEGKALSDGAIGEEIRV 212
Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
+N + M+ + G V V
Sbjct: 213 QNRTSRRMIDAIITAVGEVTV 233
>gi|85712248|ref|ZP_01043299.1| Flagellar basal body P-ring biosynthesis protein [Idiomarina
baltica OS145]
gi|85693875|gb|EAQ31822.1| Flagellar basal body P-ring biosynthesis protein [Idiomarina
baltica OS145]
Length = 233
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 3/149 (2%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
V + + + + G ++ S L +++V S +R N
Sbjct: 88 TVEIKCQSQPAWRTYVPVRIYRYKTVWAAATPMQPGHLIAASDLTQVEVDVSQVRANLFE 147
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ ++G T+R + I ++ G +V I+ + I+ G AL+D
Sbjct: 148 DNQLLIGSRTKRRVAAGKAIEARDT---CLVCEGEQVTIVAKSKALKITATGEALADGLQ 204
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+ +AVKN+ + + V V V +
Sbjct: 205 GESVAVKNVRSNKSLEAIVTGLNEVTVNL 233
>gi|291326358|ref|ZP_06124207.2| flagella basal body P-ring formation protein FlgA [Providencia
rettgeri DSM 1131]
gi|291314705|gb|EFE55158.1| flagella basal body P-ring formation protein FlgA [Providencia
rettgeri DSM 1131]
Length = 212
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +V G V + IN GE + + + + + + G V R +
Sbjct: 78 FIQLTVNVTGQYYVATRNINRGEPIQFVDIGTKKGLLHKLPAGASTDKIALRGAVALRNI 137
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
S+ +P+ I G V + + N ++ G A+++A+ G V+ ++ G +
Sbjct: 138 PAGQTFTKSMTRQPWAIKAGQTVFVFASGDNFSVKYEGRAINNATAGQNTRVRLLN-GQV 196
Query: 137 VSGSVVDTGTVRVVVK 152
V+G ++ G+V+V +K
Sbjct: 197 VNGEALENGSVQVALK 212
>gi|183598613|ref|ZP_02960106.1| hypothetical protein PROSTU_02013 [Providencia stuartii ATCC 25827]
gi|188020792|gb|EDU58832.1| hypothetical protein PROSTU_02013 [Providencia stuartii ATCC 25827]
Length = 218
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +V G V + I GE + + + + A + G + R +
Sbjct: 84 FIQLTVNVTGQYYVATRNIARGEKIEFVDIGTQKGLLHKLPTGAATDKVAIRGSIALRDI 143
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ S++ RP+ + G V + N ++ G A+++A+ G+ V+ + G +
Sbjct: 144 NAGQTLTQSMMRRPWAVKAGQNVYVFANGHNFSVKYEGRAINNAATGENTRVR-LINGQV 202
Query: 137 VSGSVVDTGTVRVVVK 152
V+G ++ G+VRV +K
Sbjct: 203 VNGEALENGSVRVALK 218
>gi|295096229|emb|CBK85319.1| flagella basal body P-ring formation protein FlgA [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 224
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV +V I G +L + + + I V+ R +
Sbjct: 92 LQVAVQATGNYVVAAVPIPRGSLLQPDSVTLKRGRLDQLPPRTMLDINQAQEAVSLRDVA 151
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I LS+L + + + G +V ++ +I++ G AL++A++ V+ + +G +V
Sbjct: 152 PGQAIQLSMLRQAWRVKAGQQVMVVANGEGFSINSEGKALNNAAVAQNARVR-MSSGQVV 210
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 211 SGTVGPDGNILINL 224
>gi|254261371|ref|ZP_04952425.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 1710a]
gi|76579771|gb|ABA49246.1| flagella basal body P-ring formation protein FlgA, putative
[Burkholderia pseudomallei 1710b]
gi|254220060|gb|EET09444.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 1710a]
Length = 509
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 373 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 429 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507
>gi|238927616|ref|ZP_04659376.1| SAF domain protein [Selenomonas flueggei ATCC 43531]
gi|238884541|gb|EEQ48179.1| SAF domain protein [Selenomonas flueggei ATCC 43531]
Length = 254
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 60/144 (41%)
Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
+ L + +V +V I E + + + + + +
Sbjct: 111 VDGVLQRRASCYYQVTVYDRVLVAMTDIRMDEAITPANAHIEESSVDTLPETTVTDFSRL 170
Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
G V R + VI +L P V+S G+ V ++ G +TI G+AL IG VI
Sbjct: 171 AGRVAGRYIRKGMVIAPPLLAMPRVVSAGSPVELVAESGGITIRAEGVALEAGRIGYVIR 230
Query: 128 VKNIDTGVMVSGSVVDTGTVRVVV 151
V+N +G ++ G V+D TV+++
Sbjct: 231 VRNASSGKLMRGRVIDEKTVQIIA 254
>gi|323975934|gb|EGB71028.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
TW10509]
Length = 252
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 58/134 (43%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ V+ V+ ++ L + ++ S R + + + +GL ++ L
Sbjct: 117 VAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRDVLMDLNEAIGLSSKHALQ 176
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L P +I R V I+ +T S G+AL + G+++ V+N + ++
Sbjct: 177 PGRPLTKEELVSPVLIERDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVI 236
Query: 138 SGSVVDTGTVRVVV 151
S V ++G V V
Sbjct: 237 SAIVAESGVVTTVS 250
>gi|227328334|ref|ZP_03832358.1| flagellar basal body P-ring biosynthesis protein FlgA
[Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 222
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
V G+ V + +IN G L E ++ + + ++ G V R L
Sbjct: 89 FIQTEVQVTGNYVTSARLINRGTTLTEKDIRLTKGRLDLLPLRPILTLPGAQGAVLLRDL 148
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P VI S++ R +V+ G V+II T++ G A+++A+ G + V+ + G +
Sbjct: 149 TPGQVITASMIRRAWVVKAGQSVQIIAQGEGFTVNGEGKAMNNAAAGQAVRVR-MANGQI 207
Query: 137 VSGSVVDTGTVRV 149
VSG + G + +
Sbjct: 208 VSGITNEDGIILI 220
>gi|209547929|ref|YP_002279846.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209533685|gb|ACI53620.1| flagella basal body P-ring formation protein FlgA [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 160
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 58/141 (41%), Positives = 94/141 (66%), Gaps = 3/141 (2%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
+++ + +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A +I V GLV
Sbjct: 23 IFLPADVDAG---MGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLSGDFAKTISQVEGLV 79
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
++R LLP I +S L PY ++RG+ +R++ + G MTIS AG L D + G +I +N+
Sbjct: 80 SKRTLLPGRTISVSGLREPYTVTRGSSIRLVFSLGAMTISAAGSPLEDGATGQLIRARNM 139
Query: 132 DTGVMVSGSVVDTGTVRVVVK 152
D+GV+VSG+V+ GTV V K
Sbjct: 140 DSGVIVSGTVLADGTVHVRAK 160
>gi|27363711|ref|NP_759239.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
vulnificus CMCP6]
gi|27359827|gb|AAO08766.1| Flagellar basal-body P-ring formation protein flgA [Vibrio
vulnificus CMCP6]
Length = 248
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S+ S+ V + ++ GE+++ S + + R I VVG
Sbjct: 114 WQIYVPVRLSIAVSL----VTANRSLSRGEIISFSDVSTNLIELQRFRKEGYSDINQVVG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+RVL P V+ + V+ R KV I T+ MTI+T G +L D + G+ + VK
Sbjct: 170 AKVKRVLRPGDVVERGDI---CVVCRNEKVVIKATKDGMTITTQGTSLQDGATGEQVRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V V V
Sbjct: 227 NDKSQRIIEGIVTGIAEVTV 246
>gi|37679141|ref|NP_933750.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
vulnificus YJ016]
gi|320157115|ref|YP_004189494.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
vulnificus MO6-24/O]
gi|37197883|dbj|BAC93721.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
vulnificus YJ016]
gi|319932427|gb|ADV87291.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
vulnificus MO6-24/O]
Length = 248
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S+ S+ V + ++ GE+++ S + + R I VVG
Sbjct: 114 WQIYVPVRLSIAVSL----VTANRSLSRGEIISFSDVSTNLIELQRFRKEGYSDINQVVG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+RVL P V+ + V+ R KV I T+ MTI+T G +L D + G+ + VK
Sbjct: 170 AKVKRVLRPGDVVERGDI---CVVCRNEKVVIKATKDGMTITTQGTSLQDGATGEQVRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V V V
Sbjct: 227 NDKSQRIIEGIVTGIAEVTV 246
>gi|253990131|ref|YP_003041487.1| flagella basal body p-ring formation protein flga [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|211639032|emb|CAR67646.1| flagella basal body p-ring formation protein flga [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253781581|emb|CAQ84744.1| flagella basal body p-ring formation protein flga [Photorhabdus
asymbiotica]
Length = 219
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ SV G+ +V ++ +VL+E ++ + + + ++ V R +
Sbjct: 86 FIQVAVSVTGNYLVTRRALSRNDVLSEKDVQVRSGLLEKLPHDLIFNKNEIKNGVAVRNI 145
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
V+ ++L RP+ + G V +I+ I G A+++A+ D + V+ +++G++
Sbjct: 146 PAGQVLTRTMLRRPWAVRSGQNVVVIVQGDGFQIRNEGKAINNAATSDKVRVR-MNSGLV 204
Query: 137 VSGSVVDTGTVRVVV 151
++G ++ G+V++++
Sbjct: 205 ITGQALENGSVKIML 219
>gi|238782788|ref|ZP_04626817.1| Flagellar basal body P-ring biosynthesis protein [Yersinia
bercovieri ATCC 43970]
gi|238716211|gb|EEQ08194.1| Flagellar basal body P-ring biosynthesis protein [Yersinia
bercovieri ATCC 43970]
Length = 236
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ G PS + G + L+ + + + + + ++GL T R +
Sbjct: 101 FIQIAVYAQGTWWTPSHPLKPGVTIQPEDLESRTGSLARLPEGVVFNKEHIIGLTTTRSI 160
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ + L +P VI G +V +I T I + G AL +A++G + + TG +
Sbjct: 161 NRGQPVLQNQLRQPRVIMTGQEVEMIATGPGFRIRSRGKALDNAALGGTLRII-TKTGQI 219
Query: 137 VSGSVVDTGTVRVVVK 152
++G+V G V + +K
Sbjct: 220 MTGTVTAEGKVNIDLK 235
>gi|217424999|ref|ZP_03456495.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 576]
gi|254196807|ref|ZP_04903231.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei S13]
gi|169653550|gb|EDS86243.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei S13]
gi|217392019|gb|EEC32045.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 576]
Length = 509
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 373 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 429 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507
>gi|126453246|ref|YP_001064560.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei 1106a]
gi|242316721|ref|ZP_04815737.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 1106b]
gi|126226888|gb|ABN90428.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 1106a]
gi|242139960|gb|EES26362.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 1106b]
Length = 507
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 371 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 426
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 427 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 486
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 487 -MAAGQIVTAIVKDAATVEI 505
>gi|146311242|ref|YP_001176316.1| flagellar basal body P-ring biosynthesis protein FlgA [Enterobacter
sp. 638]
gi|145318118|gb|ABP60265.1| SAF domain [Enterobacter sp. 638]
Length = 219
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ G+ VV + I G VL + ++ + + I V+ R L
Sbjct: 86 FLQVNVQATGNYVVAAQPIARGSVLQTTSVELKRGRLDQLPPRTMLDINQAQDSVSLRDL 145
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P I LS+L + + + G +V +I ++++ G AL++A++ V+ + +G +
Sbjct: 146 APGQAIQLSMLRQAWRVKAGQRVMVIANGDGFSVNSEGQALNNAAVAQNARVR-MSSGQV 204
Query: 137 VSGSVVDTGTVRVVV 151
VSG+V G + + +
Sbjct: 205 VSGTVGSDGIILINL 219
>gi|237810457|ref|YP_002894908.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei MSHR346]
gi|237503791|gb|ACQ96109.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei MSHR346]
Length = 509
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 373 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 429 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507
>gi|221069326|ref|ZP_03545431.1| flagella basal body P-ring formation protein FlgA [Comamonas
testosteroni KF-1]
gi|220714349|gb|EED69717.1| flagella basal body P-ring formation protein FlgA [Comamonas
testosteroni KF-1]
Length = 252
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ CV+ + +++++ + + G A V I AG+ L+ +V +
Sbjct: 108 LRCVQGSVPWNVFLPIIVRAY----GPAWVAQGNIPAGKTLSAEDAVPAEVDWAEDSAAV 163
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ +D +G+V R L + +++ P + + G+ V++++ G +++ +G A++ A
Sbjct: 164 FANAEDFIGMVAARPLTSGQALRQNMVRPPALFTAGSPVQVMVNGGGFSVAGSGKAMAAA 223
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G + V+ +D G +V+G+V +G V V
Sbjct: 224 GEGQQVRVR-MDNGRLVTGTVNASGVVLV 251
>gi|331645414|ref|ZP_08346518.1| SAF domain protein [Escherichia coli M605]
gi|331045576|gb|EGI17702.1| SAF domain protein [Escherichia coli M605]
Length = 252
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 59/151 (39%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
++ + F + ++ V+ V+ ++ L + ++ S R
Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRREV 159
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
D +G ++ L P I L ++ R V I+ +T S G+AL +
Sbjct: 160 LMEPNDAIGFSSKHALQPGRPITKEELISAVLVERDQPVMIVYQSAGITASMPGVALKNG 219
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+++ V+N + ++S V ++G V V
Sbjct: 220 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 250
>gi|311280021|ref|YP_003942252.1| flagella basal body P-ring formation protein FlgA [Enterobacter
cloacae SCF1]
gi|308749216|gb|ADO48968.1| flagella basal body P-ring formation protein FlgA [Enterobacter
cloacae SCF1]
Length = 219
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G VV + I G L + + + G V+ R L
Sbjct: 87 LQVVVEATGDYVVAAQAIARGATLQAESVTLKRGRLDQLPPKTMLDPAQAQGAVSLRDLA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + LS+L + + + G +V++I + ++++ G AL++A++ V+ + +G +V
Sbjct: 147 PGQPVQLSMLRQSWRVKAGQRVQVIASGDGFSVNSQGQALNNAAVAQNARVR-MPSGQIV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 206 SGMVNADGNILINL 219
>gi|54308091|ref|YP_129111.1| flagellar basal body P-ring biosynthesis protein FlgA
[Photobacterium profundum SS9]
gi|46912517|emb|CAG19309.1| putative FlgA [Photobacterium profundum SS9]
Length = 235
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV L VV + + G VLN S L V + RG +++G
Sbjct: 101 WQVYVPVRVQLLLPR----VVAATPLARGLVLNASHLSVKLVESRFQRGIVFEQPAEIIG 156
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + + + + ++ R V I G + I T G ALSD ++G+ I V+
Sbjct: 157 SKVKRTVNIGEAVQGNDI---CLVCRNDAVMIKAGNGGLNIITNGTALSDGALGEQIRVQ 213
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V G V V
Sbjct: 214 NTKSKRIIDGIVSAVGEVTV 233
>gi|218708798|ref|YP_002416419.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
splendidus LGP32]
gi|218321817|emb|CAV17785.1| Flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
splendidus LGP32]
Length = 248
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S+ V + + GE++ + + ++ + R + + V+G
Sbjct: 114 WRVYVPVRLSMSV----PLVTTTRSLARGEIVGQYDVTTAMISLNKFRRQGFTTPQQVIG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ L P V+ + V+ R KV I +G MTI+T G AL+D S+GD + VK
Sbjct: 170 AKVKKNLRPGDVVERGDI---CVVCRNEKVIIQAVKGGMTITTKGTALTDGSMGDQVRVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V V V
Sbjct: 227 NDKSQRIIEGIVTSMSEVTV 246
>gi|126440298|ref|YP_001057318.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei 668]
gi|126219791|gb|ABN83297.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 668]
Length = 509
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 373 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 429 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507
>gi|134297202|ref|YP_001120937.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
vietnamiensis G4]
gi|134140359|gb|ABO56102.1| SAF domain protein [Burkholderia vietnamiensis G4]
Length = 443
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + +G
Sbjct: 307 WTVYLQAKVTVQA----TYYVAARQIAPGEPLTAADLIARNGDLTVLPLAVITDPAQAIG 362
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + + +L +S G VR++ TIS G AL++A+ G + V+
Sbjct: 363 ATSLARIAAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGNALANAAPGQSVRVR 422
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 423 -MAAGQIVTAIVKDAGTVEI 441
>gi|261341498|ref|ZP_05969356.1| putative flagellar protein [Enterobacter cancerogenus ATCC 35316]
gi|288316294|gb|EFC55232.1| putative flagellar protein [Enterobacter cancerogenus ATCC 35316]
Length = 261
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
Query: 1 MDCVRFLLF------FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS 54
+ +RF + + + V + ++ + G V+ S + + S
Sbjct: 105 LRRLRFDVRCDAASGWDIAVTVKP----DIYLQVLMAKNTLERGHVMTASDITRRKFNIS 160
Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
N+R Y DVVGL +R + + LS L P ++ RG +V +I Q + T G
Sbjct: 161 NLRSGYITRPDDVVGLTLKRRIRELQPLSLSQLDSPVMVERGQRVLMIADQDGVEARTMG 220
Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
IA G++I VKN + V+ V+D G VR
Sbjct: 221 IASKKGRKGEMIKVKNESSEREVTAMVIDMGVVR 254
>gi|206558964|ref|YP_002229724.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
cenocepacia J2315]
gi|198035001|emb|CAR50873.1| putative flagellar basal body P-ring formation protein FlgA
[Burkholderia cenocepacia J2315]
Length = 403
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L+ + L + + +G
Sbjct: 267 WTVYLQAKVAVQA----TYYVAARQIAPGEPLSAADLVARDGDLTVLPLAVITDPAQAIG 322
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G L++A+ G + V+
Sbjct: 323 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVR 382
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 383 -MAAGQIVTAIVKDAGTVEI 401
>gi|294625269|ref|ZP_06703908.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292600443|gb|EFF44541.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
Length = 268
Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I+AGE ++ + + + + I G
Sbjct: 119 NTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVL 178
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA
Sbjct: 179 ADPVAAVGKTARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAG 238
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 239 ENERVSVENSSSRRVVQGIVEASGTVVV 266
>gi|319790433|ref|YP_004152066.1| flagella basal body P-ring formation protein FlgA [Thermovibrio
ammonificans HB-1]
gi|317114935|gb|ADU97425.1| flagella basal body P-ring formation protein FlgA [Thermovibrio
ammonificans HB-1]
Length = 321
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
+ L+ + + + VV +V+I G + + +K V + N HS+
Sbjct: 175 QVLVNGKVVKKVWIPVRIDRLEKVVVAAVLIPKGTKITPTMVKLASVPSRKAY-NAFHSV 233
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
K+VVG + R +L +I ++L +++ R V+++ G + I G+AL + G
Sbjct: 234 KEVVGSIARTDILSGKIIRPTMLKPNFLVKRNMPVKVVYNSGPIHIELLGVALDNGVKGH 293
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVR 148
+I VKNI TG ++ VV G V
Sbjct: 294 IIRVKNISTGKVLRCRVVGEGLVE 317
>gi|170742324|ref|YP_001770979.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
sp. 4-46]
gi|168196598|gb|ACA18545.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
sp. 4-46]
Length = 347
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 54/136 (39%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
S + V + + GE + + + + +VG V +
Sbjct: 195 ASLRVSGQVIEMVEVAVLARPLARGETVGPQDVTLERRPRDAAPPDGVADAASLVGQVAQ 254
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R L P + + L RP ++ RG V I+ ++++ G+A +G ++V N +
Sbjct: 255 RALAPGQPLRSADLARPDLVQRGEAVTILYEGPGVSLALGGLAREGGPLGATVSVVNPVS 314
Query: 134 GVMVSGSVVDTGTVRV 149
++ G+VV G V V
Sbjct: 315 KKVLQGTVVGPGRVSV 330
>gi|94500235|ref|ZP_01306768.1| Flagellar basal body P-ring biosynthesis protein [Oceanobacter sp.
RED65]
gi|94427534|gb|EAT12511.1| Flagellar basal body P-ring biosynthesis protein [Oceanobacter sp.
RED65]
Length = 248
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 61/132 (46%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ ++ VV + + L L +++R Y ++V+G ++R L
Sbjct: 115 VPVELNIKAPVVVLNQPVPKDIELQARHLDLEIHNLADLRSGYFLKKENVIGKQSKRGLA 174
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
V+ ++ ++ +G +V I ++G M++ G AL+D G I VKN+ + ++
Sbjct: 175 GQTVLNGRLVLPALLVKKGDRVIISASKGPMSVKMPGEALNDGREGRQIRVKNLRSERII 234
Query: 138 SGSVVDTGTVRV 149
+V ++G V V
Sbjct: 235 RATVEESGVVSV 246
>gi|167617580|ref|ZP_02386211.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
thailandensis Bt4]
Length = 212
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 76 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTMLPLAVITDAQQAVG 131
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIST G L++A+ G + V+
Sbjct: 132 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGHGFTISTEGSVLNNAAPGQQVRVR 191
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 192 -MAAGQIVTAIVKDAATVEI 210
>gi|59712487|ref|YP_205263.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
fischeri ES114]
gi|59480588|gb|AAW86375.1| flagellar P-ring chaperone FlgA [Vibrio fischeri ES114]
Length = 255
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV ++ V ++ G ++ S L V + + ++ D+VG
Sbjct: 121 WKVYVPVKT----ELMMPLVTAISSLSRGHTISSSDLTLTMVNSRTYQRGGYINVDDLVG 176
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + + + + ++ R V I +G ++I T G AL D ++GD + VK
Sbjct: 177 ARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVK 233
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N + +V+G V G + +
Sbjct: 234 NDKSNRIVNGIVTSVGEISIR 254
>gi|170734378|ref|YP_001766325.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
cenocepacia MC0-3]
gi|169817620|gb|ACA92203.1| flagella basal body P-ring formation protein FlgA [Burkholderia
cenocepacia MC0-3]
Length = 408
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L+ + L + + +G
Sbjct: 272 WTVYLQAKVAVQA----TYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIG 327
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G L++A+ G + V+
Sbjct: 328 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVR 387
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 388 -MAAGQIVTAIVKDAGTVEI 406
>gi|294664586|ref|ZP_06729927.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292605643|gb|EFF48953.1| flagellar basal body P-ring biosynthesis protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 268
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I+AGE ++ + + + + I G
Sbjct: 119 NTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVL 178
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA
Sbjct: 179 ADPVAAVGKAARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAG 238
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 239 ENERVSVENSSSRRVVQGIVEASGTVVV 266
>gi|218672800|ref|ZP_03522469.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
etli GR56]
Length = 163
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 59/144 (40%), Positives = 95/144 (65%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
++ + + + +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A SI V
Sbjct: 20 MIAVAGIVMPAGATPGMGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVE 79
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
GLV++R LLP I +S L PY ++RG+ +R++ + G MTIS AG L D + G +I
Sbjct: 80 GLVSKRTLLPGRTIAVSGLREPYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQLIRA 139
Query: 129 KNIDTGVMVSGSVVDTGTVRVVVK 152
+N+D+GV+VSG+V+ GTV V K
Sbjct: 140 RNMDSGVIVSGTVLADGTVHVRAK 163
>gi|307131613|ref|YP_003883629.1| flagellar basal-body P-ring formation protein flgA [Dickeya
dadantii 3937]
gi|306529142|gb|ADM99072.1| Flagellar basal-body P-ring formation protein flgA [Dickeya
dadantii 3937]
Length = 228
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ V G+ VV + I G L ++ ++ + + ++ G V R +
Sbjct: 95 FVQVEVQVTGNYVVAAAPIGRGAELTSGDIRTIRGRIDQLPPRALFTPEEAQGAVALRDI 154
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P + ++ +P+VI G V+I+ ++ + G A+++A+ G + +G +
Sbjct: 155 APGQALTQVMIRKPWVIRAGQNVQILAQGDGFSVRSEGKAMNNAASGQSARAR-TASGQV 213
Query: 137 VSGSVVDTGTVRV 149
VSG D G + +
Sbjct: 214 VSGIATDDGIILI 226
>gi|134283631|ref|ZP_01770330.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 305]
gi|134245040|gb|EBA45135.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 305]
Length = 509
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + + A V + I GE L + L + + + VG
Sbjct: 373 WTIYLQAKLVVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 428
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 429 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 488
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 489 -MAAGQIVTAIVKDAATVEI 507
>gi|148976388|ref|ZP_01813094.1| flagellar basal body P-ring biosynthesis protein A [Vibrionales
bacterium SWAT-3]
gi|145964211|gb|EDK29467.1| flagellar basal body P-ring biosynthesis protein A [Vibrionales
bacterium SWAT-3]
Length = 234
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S+ V + + GE++ + + ++ + R + + V+G
Sbjct: 100 WRVYVPVRLSMSV----PLVTTTRALARGEIIGQYDVTTAMISLNKFRRQGFTAPEQVIG 155
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ L P V+ + V+ R KV I +G MTI+T G AL+D S+GD + VK
Sbjct: 156 AKVKKNLRPGDVVERGDI---CVVCRNEKVIIQAVKGGMTITTKGTALTDGSMGDQVRVK 212
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V + V V
Sbjct: 213 NDKSQRIIEGIVTNMSEVTV 232
>gi|297538892|ref|YP_003674661.1| flagella basal body P-ring formation protein FlgA [Methylotenera
sp. 301]
gi|297258239|gb|ADI30084.1| flagella basal body P-ring formation protein FlgA [Methylotenera
sp. 301]
Length = 251
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++YV + + VI +V + + G+ + E + + + +G
Sbjct: 115 WTIYVQATVN----VIAQYLVAASPLAQGQTVTEQDMMFESGDLTQLPAGVFTEQSQAIG 170
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ V+ +L V+ G V + ++S G++++ A+ G V+ VK
Sbjct: 171 RTVNISMNAGAVLRQELLKVAPVVQLGQTVMVTSKGNGFSVSAEGLSMAKANEGQVVQVK 230
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ +G +V+G + G V V
Sbjct: 231 -VASGQIVTGIARNGGQVEV 249
>gi|163744350|ref|ZP_02151710.1| Flageller protein FlgA [Oceanibulbus indolifex HEL-45]
gi|161381168|gb|EDQ05577.1| Flageller protein FlgA [Oceanibulbus indolifex HEL-45]
Length = 219
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 60/133 (45%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
FA V VP + +++ E L M++ I ++V+G RRVL
Sbjct: 85 RIGGFALVTMPVPVPVTRLLPDDIIMEDDLAIMRLPVGRIGAYVITDAEEVIGKQVRRVL 144
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P I + P VI+RG +V I + G + +S+ G AL DA G I + N+ +
Sbjct: 145 TPGRPIQTQSIIHPLVINRGERVDIYFSDGLLALSSPGRALDDAHEGQEIRIVNLVSNKT 204
Query: 137 VSGSVVDTGTVRV 149
V+G GTV +
Sbjct: 205 VTGIATGEGTVEI 217
>gi|190890364|ref|YP_001976906.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
gi|190695643|gb|ACE89728.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
Length = 160
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 60/142 (42%), Positives = 92/142 (64%), Gaps = 1/142 (0%)
Query: 12 LYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
+ A +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A SI V GL
Sbjct: 19 AVAGIMVPAGADAGMGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVEGL 78
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
V++R LLP I +S L PY ++RG+ +R++ + G MTIS AG L D + G +I +N
Sbjct: 79 VSKRTLLPGRTIAVSGLREPYTVTRGSSIRLVFSLGPMTISAAGTPLEDGATGQLIRARN 138
Query: 131 IDTGVMVSGSVVDTGTVRVVVK 152
+D+GV+VSG+V+ GTV V K
Sbjct: 139 MDSGVIVSGTVLADGTVHVRAK 160
>gi|24459271|gb|AAL86624.1| FlgA [Vibrio fischeri ES114]
Length = 248
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV ++ V ++ G ++ S L V + + ++ D+VG
Sbjct: 114 WKVYVPVKT----ELMMPLVTAISSLSRGHTISSSDLTLTMVNSRTYQRGGYINVDDLVG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + + + + ++ R V I +G ++I T G AL D ++GD + VK
Sbjct: 170 ARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVK 226
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N + +V+G V G + +
Sbjct: 227 NDKSNRIVNGIVTSVGEISIR 247
>gi|86146161|ref|ZP_01064487.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp.
MED222]
gi|85836108|gb|EAQ54240.1| flagellar basal body P-ring biosynthesis protein [Vibrio sp.
MED222]
Length = 234
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S+ V + + GE++ + + ++ + R + + V+G
Sbjct: 100 WRVYVPVRLSMSV----PLVTTTRSLARGEIVGQYDVTTAMISLNKFRRQGFTTPQQVIG 155
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ L P V+ + V+ R KV I +G MTI+T G AL+D S+GD + VK
Sbjct: 156 AKVKKNLRPGDVVERGDI---CVVCRNEKVIIQAVKGGMTITTKGTALTDGSMGDQVRVK 212
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V V V
Sbjct: 213 NDKSQRIIEGIVTSMSEVTV 232
>gi|330826751|ref|YP_004390054.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus
denitrificans K601]
gi|329312123|gb|AEB86538.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus
denitrificans K601]
Length = 248
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 5/148 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C+ +++++ F G A V + + +GEVL+E+ E +V +
Sbjct: 103 LRCMDGPTRWNVFLPITVKAF----GPAWVLAGNVASGEVLSEADAVEAEVDWAAEPAAI 158
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ + VGL+ R L + +++ P + G+ VR+++ ++++G A+S
Sbjct: 159 VANPQAWVGLIATRPLAAGQALRQNMVRAPDLFKAGSPVRVVVQGPGYAVTSSGQAMSAG 218
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
+ G + V+ + G +V+G V++ GTV
Sbjct: 219 AQGQNVRVR-MANGRIVAGIVLEDGTVE 245
>gi|323191534|gb|EFZ76795.1| lateral flagellar P-ring addition protein [Escherichia coli
RN587/1]
Length = 245
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 61/151 (40%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
++ + F + ++ V+ V+ ++ L E+ ++ S R
Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTENDVELKPYNVSAQRREV 152
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
D +G ++ L P I L P ++ R V I+ +T S G+AL +
Sbjct: 153 LMEPNDAIGFSSKHALQPGRPITKEELISPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+++ V+N + ++S V ++G V V
Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243
>gi|15606189|ref|NP_213566.1| flagellar protein FlgA [Aquifex aeolicus VF5]
gi|6225340|sp|O67005|FLGA_AQUAE RecName: Full=Flagella basal body P-ring formation protein flgA;
Flags: Precursor
gi|2983376|gb|AAC06962.1| flagellar protein FlgA [Aquifex aeolicus VF5]
Length = 223
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ R L + +L +V I GE LN S ++E ++ N+
Sbjct: 77 NSPRGFLHLKNTKVGTIALELEWKCRVLVAKRDIYPGERLNFSNVEEREIYLERCPQNF- 135
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
++ V V + + ++ S L + +++ RG V + GN+ I AL +
Sbjct: 136 --KENFVNFVALKEIKKGTIVRRSYLKKEFLVKRGEIVNAVYENGNVVIRFRTKALENGY 193
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
G+VI V + + ++ G ++ GTV+++
Sbjct: 194 YGEVIRVLSPFSRKVIRGKIIGEGTVKIL 222
>gi|225850284|ref|YP_002730518.1| putative flagellar protein FlgA [Persephonella marina EX-H1]
gi|225645553|gb|ACO03739.1| putative flagellar protein FlgA [Persephonella marina EX-H1]
Length = 312
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
S+ + + I GE++ E ++ ++ + IKD+VG + +
Sbjct: 176 RISVKYRKLRRVIAAKRYIKKGEIITEEDIRFIKTDKN--VRKPFTDIKDIVGSTAKIDI 233
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ VI ++ Y + R V++I ++ ++ I G+AL + +GD+I VKNI +G +
Sbjct: 234 SENDVITERMVIPDYKVKRKDYVKVIYSRNSIRIEIQGVALENGKLGDLIKVKNISSGKV 293
Query: 137 VSGSVVDTGTV 147
+ V+ TV
Sbjct: 294 LICKVIGKDTV 304
>gi|91792658|ref|YP_562309.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
denitrificans OS217]
gi|91714660|gb|ABE54586.1| Flageller protein FlgA [Shewanella denitrificans OS217]
Length = 235
Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 7/144 (4%)
Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
+ +Y+ ++ VV V++ G ++ L V ++RG + I+ +
Sbjct: 99 YLWQVYISVRV----EILYPVVVADNVLSPGALITRDSLNIAFVDQYSLRGQFFTEIEQI 154
Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
+G +R + D I L + +G V I N+ I T+G AL+D + GD I
Sbjct: 155 IGSRVKRRVAKDAPILSGNL---CFVCKGDPVSIFARTENIVIKTSGEALNDGNEGDTIR 211
Query: 128 VKNIDTGVMVSGSVVDTGTVRVVV 151
VKN + + V G V V +
Sbjct: 212 VKNSISNRELDAQVTGIGEVEVKM 235
>gi|299131786|ref|ZP_07024981.1| flagella basal body P-ring formation protein FlgA [Afipia sp.
1NLS2]
gi|298591923|gb|EFI52123.1| flagella basal body P-ring formation protein FlgA [Afipia sp.
1NLS2]
Length = 343
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 8/157 (5%)
Query: 2 DCVRFLLFFSLY-------VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS 54
RF + F + + A A V + +++ S + + S
Sbjct: 166 RSGRFDVLFDIASDTSSSPAKLRFTGTAVETVQAAVLMRPMERNDIIKASDVSIERRPKS 225
Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
+ + S+ +G+ RR + + L + +++R + +I + ++ G
Sbjct: 226 EVGSDGV-SLDRAIGMQMRRAMRAGQALRTLDLAKADLVTRDQGITLIYEAPGIYLTGRG 284
Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
AL + GD + V N+ + V G VV G V ++
Sbjct: 285 KALEAGTKGDTVNVLNLQSKRTVQGIVVGPGQVAIIA 321
>gi|261344146|ref|ZP_05971790.1| flagella basal body P-ring formation protein FlgA [Providencia
rustigianii DSM 4541]
gi|282567739|gb|EFB73274.1| flagella basal body P-ring formation protein FlgA [Providencia
rustigianii DSM 4541]
Length = 222
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
L +V G V + IN GE + + + + A + G + R +
Sbjct: 89 IQLVVNVTGQYYVATRNINRGETIEFVDIGTKKGLIHQLPSGAATEKIALRGTIALRNIT 148
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ S++ RP+ I G V + T N ++ G A+++A IG+ I V+ + G +V
Sbjct: 149 AGQTLTNSMVRRPWAIKSGQTVHVFATGNNFSVKYEGRAINNAVIGENIRVR-LINGQVV 207
Query: 138 SGSVVDTGTVRVVV 151
+G + G+V+V +
Sbjct: 208 NGEAQENGSVQVAL 221
>gi|326794324|ref|YP_004312144.1| flagella basal body P-ring formation protein FlgA [Marinomonas
mediterranea MMB-1]
gi|326545088|gb|ADZ90308.1| flagella basal body P-ring formation protein FlgA [Marinomonas
mediterranea MMB-1]
Length = 231
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 63/134 (47%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
S + S++ + SV I+ G V+ + +V + IRG+ + GLV R
Sbjct: 96 SFVPVSQSILIDGIKTSVPISRGSVITPTNTTTGKVDITTIRGHLYTAKTPPYGLVASRN 155
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
+ + I + +P ++ +GA+V I G +++ G AL D + G I VKN +G
Sbjct: 156 IRINTFITDKITKQPILVKKGARVLITARSGRISVKMNGTALEDGAKGQQIRVKNASSGR 215
Query: 136 MVSGSVVDTGTVRV 149
+V G VV V V
Sbjct: 216 IVYGKVVSDSEVLV 229
>gi|167843903|ref|ZP_02469411.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei B7210]
Length = 222
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 86 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 141
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 142 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 201
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 202 -MAAGQIVTAIVKDAATVEI 220
>gi|306813308|ref|ZP_07447501.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
NC101]
gi|305854071|gb|EFM54510.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
NC101]
Length = 245
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 55/134 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ V+ V+ ++ L + ++ S R D +G ++ L
Sbjct: 110 VAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRREVLMEPNDAIGFSSKHALQ 169
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I L P ++ R V I+ +T S G+AL + G+++ V+N + ++
Sbjct: 170 PGRPITKEELISPVLVERDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVI 229
Query: 138 SGSVVDTGTVRVVV 151
S V ++G V V
Sbjct: 230 SAMVAESGVVTTVS 243
>gi|152995098|ref|YP_001339933.1| flagellar basal body P-ring biosynthesis protein-like protein
[Marinomonas sp. MWYL1]
gi|150836022|gb|ABR69998.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Marinomonas sp. MWYL1]
Length = 230
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 61/134 (45%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
S + S++ A+ IN G+ +++S +V S++RG+ GL+ R
Sbjct: 95 SYVPVTQSIMIPAIKTITPINRGQAISKSNTDVGEVDISSLRGHVYTKKNPPYGLIASRN 154
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
L + I + ++P ++ +G V I + G + + G+AL + G I VKN +
Sbjct: 155 LRINTFITDDLTNQPTLVKKGDSVLITASSGTIIVRMNGVALENGIKGQQIRVKNTSSER 214
Query: 136 MVSGSVVDTGTVRV 149
++ VV V V
Sbjct: 215 IIYAKVVTDSEVLV 228
>gi|167900902|ref|ZP_02488107.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei NCTC 13177]
Length = 224
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 88 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 143
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 144 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 203
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 204 -MAAGQIVTAIVKDAATVEI 222
>gi|167736698|ref|ZP_02409472.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei 14]
Length = 221
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 85 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 140
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 141 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 200
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 201 -MAAGQIVTAIVKDAATVEI 219
>gi|261211328|ref|ZP_05925616.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
RC341]
gi|260839283|gb|EEX65909.1| flagellar basal-body P-ring formation protein FlgA [Vibrio sp.
RC341]
Length = 218
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 59/140 (42%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + + + + ++ G++++ + V R + + V+G
Sbjct: 84 WRVYVPVRLT----ITIPLITAANPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPESVIG 139
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ + VI + ++ R V I + M+I+T G A+SD +G+ I VK
Sbjct: 140 AKIKKNIRIGDVIDQKDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGILGEQIKVK 196
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ V G V V
Sbjct: 197 NDKSNRIIDAQVSGVGEVTV 216
>gi|71280005|ref|YP_268215.1| putative flagellar basal-body P-ring formation protein FlgA
[Colwellia psychrerythraea 34H]
gi|71145745|gb|AAZ26218.1| putative flagellar basal-body P-ring formation protein FlgA
[Colwellia psychrerythraea 34H]
Length = 230
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ + +Y+ + + ++ I+ G+ L+ES ++ + + IRGN
Sbjct: 93 SIKWKIYLSAKV----EITKAVLIAKNTISKGDKLDESNVELAFIAINKIRGNKLTDTNI 148
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
V G ++ + I + +I +G V II++ N +I T G+ALS +I + I
Sbjct: 149 VFGAKAKKRIAKGRAISKRSI---CLICKGDVVTIIVSSDNFSIKTQGVALSSGNINEQI 205
Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
VKN + +++ V V +
Sbjct: 206 RVKNTRSKKVITPRVKGINQVII 228
>gi|222084866|ref|YP_002543395.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
gi|221722314|gb|ACM25470.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
Length = 166
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/150 (39%), Positives = 100/150 (66%), Gaps = 3/150 (2%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
V F FS + + +G AVVP+ VI G+++ +L+E+ VTN N+ G+YA
Sbjct: 20 SVMFAPAFSAGATG---VDGTGMGTAVVPTEVIYPGDIIGSGQLEEVDVTNPNLSGDYAR 76
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+I+DV G V++R LLP I +S L +P+ ++RG+ R++++ G+MTI+ AG L D ++
Sbjct: 77 TIRDVTGRVSKRTLLPGRTISISALRQPFAVTRGSNARLVMSMGSMTITAAGTPLDDGAV 136
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
GD + +N+D+G++V+G+V++ GT+RVV K
Sbjct: 137 GDSVRARNLDSGIIVNGTVLENGTIRVVSK 166
>gi|170703816|ref|ZP_02894518.1| flagella basal body P-ring formation protein FlgA [Burkholderia
ambifaria IOP40-10]
gi|170131278|gb|EDS99903.1| flagella basal body P-ring formation protein FlgA [Burkholderia
ambifaria IOP40-10]
Length = 145
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + VG
Sbjct: 9 WTVYLQAKVAVQA----TYYVAARQIAPGEPLTAADLVARDGDLTVLPLAVITDPAQAVG 64
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G AL++A+ G I V+
Sbjct: 65 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSIRVR 124
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 125 -MAAGQIVTAIVKDAGTVEI 143
>gi|319764535|ref|YP_004128472.1| flagella basal body p-ring formation protein flga [Alicycliphilus
denitrificans BC]
gi|317119096|gb|ADV01585.1| flagella basal body P-ring formation protein FlgA [Alicycliphilus
denitrificans BC]
Length = 248
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 5/148 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C+ +++++ F G A V + + +GEVL+E+ E +V +
Sbjct: 103 LRCMDGPTRWNVFLPISVKAF----GPAWVLAGNVASGEVLSEADAVEAEVDWAAEPAAI 158
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ + VGL+ R L + +++ P + G+ VR+++ ++++G A+S
Sbjct: 159 VANPQAWVGLIATRPLAAGQALRQNMVRAPDLFKAGSPVRVVVQGPGYAVTSSGQAMSAG 218
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
+ G + V+ + G +V+G V++ GTV
Sbjct: 219 AQGQNVRVR-MANGRIVAGIVLEDGTVE 245
>gi|89072320|ref|ZP_01158899.1| LfgA [Photobacterium sp. SKA34]
gi|89051852|gb|EAR57304.1| LfgA [Photobacterium sp. SKA34]
Length = 270
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C + + L +++ + +V +I+ E++ L ++ +
Sbjct: 125 ITCESSTVNWRL----NATVYVQLTLPVMVARTLIHRDEIITRDMLDSKKLQL-KAPKSI 179
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
++ V+GL T R + +I ++L +P++I++G +V I+ +G ST G+AL
Sbjct: 180 ITNVDQVIGLHTNRRIRQGQLITENLLKKPFLINKGDQVLIVAKKGKFEASTKGVALDHG 239
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
+ + I V+N ++ V G V +
Sbjct: 240 KMKEQIKVENTANQKVIHARVFAQGKVETI 269
>gi|301646809|ref|ZP_07246661.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 146-1]
gi|331640709|ref|ZP_08341856.1| SAF domain protein [Escherichia coli H736]
gi|301075002|gb|EFK89808.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 146-1]
gi|331040083|gb|EGI12291.1| SAF domain protein [Escherichia coli H736]
Length = 252
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 61/151 (40%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
++ + F + ++ V+ V+ ++ L + ++ S R
Sbjct: 100 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNVSAQRREV 159
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ D +G ++ L P I L P ++ R V I+ +T S G+AL +
Sbjct: 160 LMELDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 219
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+++ V+N + ++S V ++G V V
Sbjct: 220 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 250
>gi|105894146|gb|ABF77311.1| Flagellar protein FlgA [Burkholderia cenocepacia AU 1054]
gi|116649133|gb|ABK09774.1| flagellar protein FlgA [Burkholderia cenocepacia HI2424]
Length = 405
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L+ + L + + +G
Sbjct: 269 WTVYLQAKVAVQA----TYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIG 324
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G L++A+ G + V+
Sbjct: 325 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVR 384
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 385 -MAAGQIVTAIVKDAGTVEI 403
>gi|212709488|ref|ZP_03317616.1| hypothetical protein PROVALCAL_00530 [Providencia alcalifaciens DSM
30120]
gi|212687826|gb|EEB47354.1| hypothetical protein PROVALCAL_00530 [Providencia alcalifaciens DSM
30120]
Length = 223
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
L +V G V + I GE + + + + + + G + R +
Sbjct: 90 LQLTVNVTGQYYVATRNIQRGETIEFVDIGTKKGLIHQLPSGASTDKMALRGTLALRNIT 149
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
S++ RP+ I G V + T N ++ G A+++A IG+ I V+ + G +V
Sbjct: 150 AGQTFTNSMVRRPWAIKAGQTVYVFATGDNFSVKYEGRAINNAVIGENIRVR-LINGQVV 208
Query: 138 SGSVVDTGTVRVVV 151
+G + G+V V +
Sbjct: 209 NGEAQENGSVHVAL 222
>gi|167822313|ref|ZP_02453784.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei 9]
Length = 218
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 82 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 137
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 138 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 197
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 198 -MAAGQIVTAIVKDAATVEI 216
>gi|255747098|ref|ZP_05421043.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholera
CIRS 101]
gi|262161358|ref|ZP_06030468.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
INDRE 91/1]
gi|262167771|ref|ZP_06035473.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
RC27]
gi|262191695|ref|ZP_06049871.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
CT 5369-93]
gi|255735500|gb|EET90900.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholera
CIRS 101]
gi|262023836|gb|EEY42535.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
RC27]
gi|262028669|gb|EEY47323.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
INDRE 91/1]
gi|262032434|gb|EEY50996.1| flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
CT 5369-93]
gi|327484722|gb|AEA79129.1| Flagellar basal-body P-ring formation protein FlgA [Vibrio cholerae
LMA3894-4]
Length = 201
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + + + + ++ G++++ + V R + ++V+G
Sbjct: 67 WRVYVPVRLT----ITIPLITAATPLSRGQMISAQDVTLSMVDLLRFRRQGFSTPENVIG 122
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ + VI + + ++ R V I + M+I+T G A+SD +G+ I VK
Sbjct: 123 AKIKKNIRVGDVIEQNDV---CIVCRNESVVIRAGKSGMSITTKGTAMSDGVVGEQIKVK 179
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ V G V V
Sbjct: 180 NDKSNRIIDAQVSGVGEVTV 199
>gi|84624083|ref|YP_451455.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|84368023|dbj|BAE69181.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 214
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I+AGE ++ + + + + I G
Sbjct: 65 NTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVL 124
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA
Sbjct: 125 ADPVAAVGKTARRILPAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAG 184
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 185 ENERVSVENSSSRRVVQGIVEASGTVVV 212
>gi|148266115|ref|YP_001232821.1| SAF domain-containing protein [Geobacter uraniireducens Rf4]
gi|146399615|gb|ABQ28248.1| SAF domain protein [Geobacter uraniireducens Rf4]
Length = 238
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 59/132 (44%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + VV + GEV+ + + + ++G + ++ VG R +
Sbjct: 105 VKVEVEALADVVVAVRPLERGEVIGNGDIAVQKRDLAKMQGKTCRTAEEAVGKRVRTAIR 164
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
++ I L + ++ G V I++ + I+ AG A + + GD + V+N+ + V
Sbjct: 165 GNNPIRADYLEKISLVKSGQLVTIVVENDALRITAAGRARNSGAEGDTVMVQNLASQKEV 224
Query: 138 SGSVVDTGTVRV 149
+ VVD TV+V
Sbjct: 225 AARVVDATTVKV 236
>gi|167579483|ref|ZP_02372357.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
thailandensis TXDOH]
Length = 209
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 73 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTMLPLAVITDAQQAVG 128
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIST G L++A+ G + V+
Sbjct: 129 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGHGFTISTEGSVLNNAAPGQQVRVR 188
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 189 -MAAGQIVTAIVKDAATVEI 207
>gi|304310781|ref|YP_003810379.1| Flageller protein FlgA [gamma proteobacterium HdN1]
gi|301796514|emb|CBL44722.1| Flageller protein FlgA [gamma proteobacterium HdN1]
Length = 227
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+S + + + +AV+ + I+ G++++ ++ + + + I D G
Sbjct: 90 WSFMMAATLRTY----QNAVIAKIPISRGQIIDTQAVELRETEITPSASGFYTRISDTKG 145
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
L+ +R + + V+ ++L P VI RG V I +I TAG+AL+ +IG+++ VK
Sbjct: 146 LLAKRSIAANQVLTHTMLKNPDVIQRGQAVIIEAGNTQFSIRTAGVALASGAIGEIVRVK 205
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N +G V G+++ T+ +
Sbjct: 206 NSTSGRTVEGTIISDNTINI 225
>gi|259417444|ref|ZP_05741363.1| flagella basal body P-ring formation protein FlgA [Silicibacter sp.
TrichCH4B]
gi|259346350|gb|EEW58164.1| flagella basal body P-ring formation protein FlgA [Silicibacter sp.
TrichCH4B]
Length = 138
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 4/132 (3%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
S + +VP I A E++ L V S +++G R L
Sbjct: 10 ILFAQSALADILVPVRTIRAKEIIAAEDLVFKNVEA----PGALSSPNEIIGQEARVALY 65
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
I + P ++ R V++I G + IST G +L + G++I V N+ + V
Sbjct: 66 ASRPIHAGDIGPPALVDRNDLVKLIFRHGGLEISTEGRSLGRGAEGELIRVMNLSSRTTV 125
Query: 138 SGSVVDTGTVRV 149
+G + G + V
Sbjct: 126 TGRIRADGNIEV 137
>gi|257095363|ref|YP_003169004.1| flagella basal body P-ring formation protein FlgA [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047887|gb|ACV37075.1| flagella basal body P-ring formation protein FlgA [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 234
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 63/149 (42%), Gaps = 6/149 (4%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C+ +++YV + V G ++ + + AG+++ +S + +
Sbjct: 90 IRCL-GPTPWTVYVP----VQVRVAGTYLLTARQLTAGQIVADSDVLMQGGDLGALPAGV 144
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
G R + + +L P+ + +G V+++ T T+S G AL++A
Sbjct: 145 LTDPAQARGKTVRSSVAAGQPLRGDLLIAPWSVQQGQSVKLVSTGTGFTVSNEGKALNNA 204
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
S G V V+ +G +VSG G V V
Sbjct: 205 SEGQVAQVR-TASGQVVSGVARGLGIVEV 232
>gi|119503639|ref|ZP_01625722.1| flagellar protein [marine gamma proteobacterium HTCC2080]
gi|119460701|gb|EAW41793.1| flagellar protein [marine gamma proteobacterium HTCC2080]
Length = 234
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 4/140 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++LYV + V + + G+++ + + + + G I ++G
Sbjct: 98 WTLYVRGEVAANQV----VPVLTAALRRGDLIGNNDIILKKRRITQENGGIVTEIDGLIG 153
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ RR L P + + + L P ++ RG V I+ + +S G AL+ + GD + V
Sbjct: 154 MEARRNLDPGNPLRFNDLVAPILVERGQTVNIVSGGSGLRVSMQGKALAKGAAGDRVLVA 213
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N+ +G V G + G+V +
Sbjct: 214 NLTSGTRVEGIIATDGSVII 233
>gi|84388085|ref|ZP_00990981.1| flagellar basal body P-ring biosynthesis protein [Vibrio splendidus
12B01]
gi|84377152|gb|EAP94022.1| flagellar basal body P-ring biosynthesis protein [Vibrio splendidus
12B01]
Length = 234
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV S+ V + + GE++ + + ++ + R + + V+G
Sbjct: 100 WRVYVPVRLSMSV----PLVTTTRSLARGEIVGQYDVTTAMISLNKFRRQGFTAPQQVIG 155
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++ L P V+ + V+ R KV I +G MTI+T G AL+D S+GD + VK
Sbjct: 156 AKVKKNLRPGDVVERGDI---CVVCRNEKVIIQAVKGGMTITTKGTALTDGSMGDQVRVK 212
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ G V V V
Sbjct: 213 NDKSQRIIEGIVTSMSEVTV 232
>gi|260767919|ref|ZP_05876853.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
furnissii CIP 102972]
gi|260615949|gb|EEX41134.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
furnissii CIP 102972]
Length = 233
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 5/147 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C + + ++ AS+ VV + G L S L T + + ++
Sbjct: 88 VRCEEGDTAWRM----NVTIKASLTLPVVVTQTALARGGRLEPSMLALEDRTLTR-QDDF 142
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
I + GL R L ++ +++ +P ++ +G +V II + + ST G+AL D
Sbjct: 143 FTRIDEASGLEVNRRLRAGQILDPTLVSKPPLVIKGNQVVIIAAKDGVNASTKGVALEDG 202
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTV 147
GD I V+N + +V V V
Sbjct: 203 GRGDQIEVQNSASQSVVHAVVTGLNQV 229
>gi|222147572|ref|YP_002548529.1| flagellar protein FLGA precursor [Agrobacterium vitis S4]
gi|221734560|gb|ACM35523.1| flagellar protein FLGA precursor [Agrobacterium vitis S4]
Length = 159
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/145 (41%), Positives = 97/145 (66%)
Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
+ + V + A+ +A+VP+ I GE ++ ++L +QVTN N+ G +A + DV
Sbjct: 15 VAVMVLVAFAAAPSAARDRYAIVPTDTIYPGEAISSNKLDRVQVTNPNLAGGFASDMADV 74
Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
VG+++ + LLP IPL+ L RPY + RG+++R+I GN+TIS +G + DA+IGDVI
Sbjct: 75 VGMLSTKTLLPGRTIPLATLKRPYAVIRGSQLRLIFNIGNLTISASGSPMDDANIGDVIR 134
Query: 128 VKNIDTGVMVSGSVVDTGTVRVVVK 152
V+N+D+G +VSG+V+ GTV+V+ K
Sbjct: 135 VRNLDSGQIVSGTVMGDGTVQVMAK 159
>gi|171322729|ref|ZP_02911475.1| flagella basal body P-ring formation protein FlgA [Burkholderia
ambifaria MEX-5]
gi|171091921|gb|EDT37390.1| flagella basal body P-ring formation protein FlgA [Burkholderia
ambifaria MEX-5]
Length = 188
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + VG
Sbjct: 52 WTVYLQAKVAVQA----TYYVAARQIAPGEPLTAADLVARDGDLTVLPLAVITDPAQAVG 107
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G AL+ A+ G + V+
Sbjct: 108 ATALARISAGLPLRQDLLKSAASVSAGQTVRVVAAGPGFTISAEGSALATAAPGQSVRVR 167
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 168 -MAAGQIVTAIVKDAGTVEI 186
>gi|241763673|ref|ZP_04761723.1| flagella basal body P-ring formation protein FlgA [Acidovorax
delafieldii 2AN]
gi|241367148|gb|EER61514.1| flagella basal body P-ring formation protein FlgA [Acidovorax
delafieldii 2AN]
Length = 200
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ CV +S+++ F G A V + + +G L + E +V +
Sbjct: 55 LRCVEGATAWSVFLPVTIKAF----GPAWVLNNNVASGVALTAADATEAEVDWAAEAAPV 110
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ VG V R L+ + S++ P V GA+VR++ ++++G ALS+
Sbjct: 111 LANPDQWVGQVASRQLMAGQAVRQSMVRAPAVFRAGAQVRVVTQGPGYMVTSSGQALSNG 170
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ G I ++ +D G +SG V + GTV V +
Sbjct: 171 ATGQTIRIR-MDNGRTISGIVNEDGTVAVTL 200
>gi|91794999|ref|YP_564650.1| flageller protein FlgA [Shewanella denitrificans OS217]
gi|91717001|gb|ABE56927.1| Flageller protein FlgA [Shewanella denitrificans OS217]
Length = 222
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 4/140 (2%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+SLYV ++ + V V + + E ++ + L +T + D+V
Sbjct: 84 SWSLYVRAIVT----VTARLPVVNRTLMRSETVSATDLNWRTLTLKPADKDILSREVDIV 139
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G R L + +I S L P ++ G V I G+A+ G+ I V
Sbjct: 140 GQQVVRKLRKNSIIKASYLDAPVLVKLGEPVIIEANSQGFHAKMTGVAMDSGKQGEPIRV 199
Query: 129 KNIDTGVMVSGSVVDTGTVR 148
KN +G +++ + G V+
Sbjct: 200 KNSRSGKVITAYPISKGRVQ 219
>gi|293408363|ref|ZP_06652202.1| conserved hypothetical protein [Escherichia coli B354]
gi|291471541|gb|EFF14024.1| conserved hypothetical protein [Escherichia coli B354]
Length = 245
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 58/134 (43%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ V+ V+ ++ L + ++ S R + + D +GL ++ L
Sbjct: 110 VAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNISAQRRDVLMELDDAIGLSSKHALQ 169
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I L P ++ R V I+ +T S G+AL + G+++ V+N + ++
Sbjct: 170 PGRPITKEELVSPVLVERDQPVMIVYQNAGITASMPGVALKNGRKGEMVKVRNASSQRVI 229
Query: 138 SGSVVDTGTVRVVV 151
S V ++G V V
Sbjct: 230 SAMVEESGVVTTVS 243
>gi|317406205|gb|EFV86454.1| flagella basal body P-ring formation protein [Achromobacter
xylosoxidans C54]
Length = 249
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
++ YV + SV GH V S +I AG+ L + L + + + VV
Sbjct: 112 AWTTYVQATV----SVPGHYYVASRMIAAGQALTPADLAPRDGDLVALPPGVITNPQTVV 167
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G+ + + + L + RG+ VRI +S+ G AL +A+ G + V
Sbjct: 168 GMTAAYRINAGQPVKGAALRNAQSVVRGSNVRINARGKGFVVSSEGQALDNAAPGATVQV 227
Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
+ +G +VSG V + G V + +
Sbjct: 228 R-TASGQVVSGVVRNAGLVEIQL 249
>gi|84514783|ref|ZP_01002146.1| flagellar basal-body P-ring formation protein FlgA [Loktanella
vestfoldensis SKA53]
gi|84510942|gb|EAQ07396.1| flagellar basal-body P-ring formation protein FlgA [Loktanella
vestfoldensis SKA53]
Length = 237
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 7 LLFFSLYVLSLDSLFASVI--------GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
+ +S+ + + + AV + +G+ + L+ + ++
Sbjct: 82 PVEWSIALRAQVQGALPQVPKVTEGQVTQAVFLRRPLRSGDRIQLDDLEIRPIDPLSVNN 141
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
Y I+DVVG V + L P + L R + I+ V + + G + I + GIAL
Sbjct: 142 VYIT-IEDVVGRVLSQSLTPRVPVSPRHLQRDWAINADDIVTLQIVNGGIEIESPGIALE 200
Query: 119 DASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
IGD I ++N+ +G V G + V+V+ K
Sbjct: 201 PGQIGDNIRLRNLSSGSEVIGRISQERKVQVISK 234
>gi|167917159|ref|ZP_02504250.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei BCC215]
Length = 232
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 96 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 151
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 152 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 211
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 212 -MAAGQIVTAIVKDAATVEI 230
>gi|167892405|ref|ZP_02479807.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei 7894]
Length = 220
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 84 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 139
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 140 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 199
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 200 -MAAGQIVTAIVKDAATVEI 218
>gi|288962679|ref|YP_003452973.1| FlgA protein [Azospirillum sp. B510]
gi|288914945|dbj|BAI76429.1| FlgA protein [Azospirillum sp. B510]
Length = 246
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
S A V VP I GEV+ + L +++ + S + +VG R
Sbjct: 100 HSVDLSGRAEVEVTMPVPVRRIRPGEVIEAADLTTIRLPLERAGAGFITSAEALVGQSPR 159
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + ++ + + P V+ R V ++ G + ++ G AL + +GD + V NI +
Sbjct: 160 RQISAGRMVQVGSVGAPIVVQRNRPVTLVYEDGALMLAARGRALQEGGVGDTVRVMNIAS 219
Query: 134 GVMVSGSVVDTGTVRV 149
+V+G+V TV V
Sbjct: 220 STIVTGTVTGAETVSV 235
>gi|52427983|gb|AAU48576.1| flagella basal body P-ring formation protein FlgA [Burkholderia
mallei ATCC 23344]
Length = 251
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 115 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 170
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 171 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 230
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 231 -MAAGQIVTAIVKDAATVEI 249
>gi|251789164|ref|YP_003003885.1| flagellar basal body P-ring biosynthesis protein FlgA [Dickeya zeae
Ech1591]
gi|247537785|gb|ACT06406.1| flagella basal body P-ring formation protein FlgA [Dickeya zeae
Ech1591]
Length = 222
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ V G VV + ++ G L ++ ++ + + ++ G + R +
Sbjct: 89 FIQVEVQVTGSYVVAAAPVSRGSELAAGDIRTVRGRIDQLPPRALFTPEEAQGAIALRDI 148
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P I ++ +P+VI G V+I+ ++ + G A+++A+ G + +G +
Sbjct: 149 APGQAITQVMIRKPWVIRAGQNVQILAQGEGFSVRSEGKAMNNAASGQPARAR-TASGQV 207
Query: 137 VSGSVVDTGTVRV 149
VSG G + +
Sbjct: 208 VSGIASGDGIILI 220
>gi|120613055|ref|YP_972733.1| SAF domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120591519|gb|ABM34959.1| SAF domain protein [Acidovorax citrulli AAC00-1]
Length = 259
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ CV +++++ + G A V + + +G VL E+ + +V +
Sbjct: 114 LRCVEGATAWNVFLPVTVKAY----GPAWVLTGNVASGAVLTEADATQAEVDWAAETTAI 169
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ ++ VG V R L+ + ++ P G+ VR++ ++++AG A++
Sbjct: 170 VANPENWVGQVASRPLMAGQALRQHMVKAPMAFRAGSPVRVVAQGRGYSVTSAGQAVTAG 229
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
SIG+ + V+ +D G +++G V + GTV V +
Sbjct: 230 SIGETVRVR-MDNGRIIAGIVSNDGTVEVGL 259
>gi|220903672|ref|YP_002478984.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219867971|gb|ACL48306.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 416
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 5/149 (3%)
Query: 4 VRFLL---FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+RF + ++ + S+ + +N G+ L+ + M+V +R
Sbjct: 269 LRFAVQEADGTVLRRVAGTATLSLWLTVPTAAQSMNKGDALSAQSVTFMRVNAGQLRDLP 328
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
R + I S L ++ RG V +I ++GN+ I+T AL+D
Sbjct: 329 WDGRGGP--WQLVRAINAGDPILQSDLASQLMVKRGDVVSLIFSRGNLRITTQAQALADG 386
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G I V+N+ T V G V + TV +
Sbjct: 387 EPGATIPVRNLQTKKQVFGIVKNGNTVEI 415
>gi|209964691|ref|YP_002297606.1| flagellar basal body P-ring biosynthesis protein FlgA
[Rhodospirillum centenum SW]
gi|209958157|gb|ACI98793.1| flagella basal body P-ring formation protein FlgA, putative
[Rhodospirillum centenum SW]
Length = 326
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 65/138 (47%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V A + + + + +GEV+ + + ++V + + ++++VGL R
Sbjct: 175 VRQTIGARAQDMVEVPILNRRLGSGEVIGDQDIAWIKVPRERVSADVVTDLENLVGLAAR 234
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R L + + + P V++RGA V ++L MT++ G AL+D +G+ + + N +
Sbjct: 235 RTLAANQPVRGRDVRTPVVVARGALVTLLLQTPAMTLTAQGKALADGGLGESVRIVNTTS 294
Query: 134 GVMVSGSVVDTGTVRVVV 151
+V +V V V+
Sbjct: 295 NRVVDATVAGPDLVTVLP 312
>gi|307136854|ref|ZP_07496210.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
H736]
gi|315616831|gb|EFU97448.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
3431]
Length = 245
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 56/134 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ V+ V+ ++ L + ++ S R + D +G ++ L
Sbjct: 110 VAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNVSAQRREVLMELDDAIGFSSKHALQ 169
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I L P ++ R V I+ +T S G+AL + G+++ V+N + ++
Sbjct: 170 PGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVI 229
Query: 138 SGSVVDTGTVRVVV 151
S V ++G V V
Sbjct: 230 SAMVAESGVVTTVS 243
>gi|167813796|ref|ZP_02445476.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei 91]
Length = 211
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 75 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 130
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 131 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 190
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 191 -MAAGQIVTAIVKDAATVEI 209
>gi|162210065|ref|YP_331875.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei 1710b]
Length = 254
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 118 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 173
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 174 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 233
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 234 -MAAGQIVTAIVKDAATVEI 252
>gi|77747859|ref|NP_637319.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|77761201|ref|YP_243307.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
campestris pv. campestris str. 8004]
gi|188991646|ref|YP_001903656.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
campestris pv. campestris str. B100]
gi|167733406|emb|CAP51607.1| Flagella basal body P-ring formation protein flgA precursor
[Xanthomonas campestris pv. campestris]
Length = 214
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I +GE ++ + + + + I G
Sbjct: 65 NTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGITSGETISLADISIEKRDAARIVGAVL 124
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RR+L ++ + L P ++ RG V ++ G + + +G ALSDA
Sbjct: 125 ADPATAVGKTARRILPAGTLLSANDLVTPRLVRRGDTVPLVSRNGGLEVRMSGRALSDAG 184
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 185 ENERVSVENSSSRRVVQGIVEASGTVVV 212
>gi|271500062|ref|YP_003333087.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii
Ech586]
gi|270343617|gb|ACZ76382.1| flagella basal body P-ring formation protein FlgA [Dickeya dadantii
Ech586]
Length = 222
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ V G+ V + I+ G L ++ ++ + + + +DV G V R +
Sbjct: 89 FVQVEVQVTGNYVAAAAPISRGTELASGDIRMVRGRIDQLPPHALFTQEDVQGAVALRDI 148
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P I ++ +P+VI G V+I+ ++ + G A+++A+ G + +G +
Sbjct: 149 APGQAITQVMIRKPWVIRAGQNVQILAQGDGFSVRSEGKAMNNAASGQQARAR-TASGQV 207
Query: 137 VSGSVVDTGTVRV 149
VSG G + +
Sbjct: 208 VSGIASGDGIILI 220
>gi|161723214|ref|YP_106896.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei K96243]
Length = 254
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 118 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 173
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 174 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 233
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 234 -MAAGQIVTAIVKDAATVEI 252
>gi|83647408|ref|YP_435843.1| flagellar basal body P-ring biosynthesis protein [Hahella
chejuensis KCTC 2396]
gi|83635451|gb|ABC31418.1| Flagellar basal body P-ring biosynthesis protein [Hahella
chejuensis KCTC 2396]
Length = 236
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV V + L L+ ++ ++R + + +DVVG
Sbjct: 99 WQIYVPVQM----ERYRQIVTIKSAVPRDYALAPEDLETKELNIIDLRYGFYTNAEDVVG 154
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
++TRR + ++L P +I++G V I + ++ G+A++D G I VK
Sbjct: 155 MITRRPVNAGSAPYPNMLEAPKLINKGDMVVIEAATHHFSVKMPGVAMADGRRGQQIMVK 214
Query: 130 NIDTGVMVSGSVVDTGTVR 148
N + MV V+ +G VR
Sbjct: 215 NSSSNRMVRAEVIGSGHVR 233
>gi|67641534|ref|ZP_00440311.1| flagella basal body P-ring formation protein FlgA [Burkholderia
mallei GB8 horse 4]
gi|121598829|ref|YP_994286.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
mallei SAVP1]
gi|124385761|ref|YP_001028065.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
mallei NCTC 10229]
gi|161579515|ref|YP_104793.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
mallei ATCC 23344]
gi|167001531|ref|ZP_02267326.1| flagella basal body P-ring formation protein FlgA [Burkholderia
mallei PRL-20]
gi|121227639|gb|ABM50157.1| flagella basal body P-ring formation protein FlgA [Burkholderia
mallei SAVP1]
gi|238522484|gb|EEP85928.1| flagella basal body P-ring formation protein FlgA [Burkholderia
mallei GB8 horse 4]
gi|243062733|gb|EES44919.1| flagella basal body P-ring formation protein FlgA [Burkholderia
mallei PRL-20]
Length = 254
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 118 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 173
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 174 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 233
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 234 -MAAGQIVTAIVKDAATVEI 252
>gi|167909120|ref|ZP_02496211.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei 112]
Length = 214
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 78 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 133
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 134 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 193
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 194 -MAAGQIVTAIVKDAATVEI 212
>gi|59889777|emb|CAH19132.1| Lateral flagellar P-ring addition protein (FlgA-like) [Escherichia
coli]
gi|284920041|emb|CBG33097.1| lateral flagellar P-ring addition protein (FlgA-like) [Escherichia
coli 042]
Length = 245
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 57/133 (42%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ V+ V+ ++ L + ++ S R + D +GL ++ L
Sbjct: 110 VAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRREVLMELDDAIGLSSKHALQ 169
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I L P ++ R V I+ +T S G+AL + G+++ V+N + ++
Sbjct: 170 PGKPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVI 229
Query: 138 SGSVVDTGTVRVV 150
S V ++G V V
Sbjct: 230 SAMVAESGVVTTV 242
>gi|197334457|ref|YP_002156706.1| flagellar basal body P-ring biosynthesis protein [Vibrio fischeri
MJ11]
gi|197315947|gb|ACH65394.1| flagellar basal body P-ring biosynthesis protein [Vibrio fischeri
MJ11]
Length = 211
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV ++ V ++ G ++ S L V + + ++ D+VG
Sbjct: 77 WKVYVPVKT----ELMMPLVTAISSLSRGHTISSSDLTLTMVNSRTYQRGGYINVDDLVG 132
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + + + + ++ R V I +G ++I T G AL D ++GD + VK
Sbjct: 133 ARIKRSVRAGETVEKNDI---CMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVK 189
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N + +V+G V G + +
Sbjct: 190 NDKSNRIVNGIVTSVGEISIR 210
>gi|58582190|ref|YP_201206.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
oryzae pv. oryzae KACC10331]
gi|188576751|ref|YP_001913680.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|188576942|ref|YP_001913871.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|58426784|gb|AAW75821.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|188521203|gb|ACD59148.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|188521394|gb|ACD59339.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 214
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I+AGE ++ + + + + I G
Sbjct: 65 NTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVL 124
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA
Sbjct: 125 ADPVAAVGKTARRILPAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAG 184
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 185 ENERVSVENSSSRRVVQGIVEASGTVVV 212
>gi|323171059|gb|EFZ56708.1| lateral flagellar P-ring addition protein [Escherichia coli LT-68]
Length = 245
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 62/151 (41%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
++ + F + ++ V+ V+ ++ L + ++ S R +
Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNVSAQRRDV 152
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ D +G ++ L P I L P ++ R V I+ +T S G+AL +
Sbjct: 153 LMVLDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNG 212
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+++ V+N + ++S V ++G V V
Sbjct: 213 HKGEMVKVRNASSQRVISAMVAESGVVTTVS 243
>gi|254562215|ref|YP_003069310.1| flageller protein FlgA [Methylobacterium extorquens DM4]
gi|254269493|emb|CAX25459.1| Flageller protein FlgA [Methylobacterium extorquens DM4]
Length = 348
Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
++ + A V + +N GE + + L + + + +
Sbjct: 189 LVVLGERQASLRVAGVAVETREVAVLTRSLNRGEAIASADLTVERRPRDGVPNDVQGAPT 248
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
VVG V +R L V+ + P +++RG V I+ +++S GIA +G
Sbjct: 249 LVVGQVAQRPLSAGAVLRSGDVAPPDLVARGDSVAIVFETPGVSLSLRGIANESGRLGAS 308
Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149
++V N + ++ V+ G V V
Sbjct: 309 VSVTNAASKKVLQAVVIAPGRVSV 332
>gi|167567650|ref|ZP_02360566.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
oklahomensis EO147]
Length = 225
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 59/140 (42%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I+ GE L+ + L + + + VG
Sbjct: 89 WTIYLQAKLAVQA----TYYVAARQISPGEALSAADLVARDGDLTMLPLAVITDPTEAVG 144
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 145 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 204
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 205 -MAAGQIVTAIVKDAATVEI 223
>gi|166712067|ref|ZP_02243274.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 214
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I+AGE ++ + + + + I G
Sbjct: 65 NTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVL 124
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA
Sbjct: 125 ADPVAAVGKTARRILPAGSLLSANDLVSQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAG 184
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 185 ENERVSVENSSSRRVVQGIVEASGTVVV 212
>gi|159184363|ref|NP_353578.2| flagellar basal body P-ring biosynthesis protein FlgA
[Agrobacterium tumefaciens str. C58]
gi|3913663|sp|Q44339|FLGA_AGRT5 RecName: Full=Flagellar protein flgA; Flags: Precursor
gi|1086562|gb|AAB68969.1| orfA; No significant homologies in the database; Method: conceptual
translation supplied by author [Agrobacterium
tumefaciens]
gi|2459715|gb|AAB71791.1| FlgA [Agrobacterium tumefaciens]
gi|159139677|gb|AAK86363.2| flagellar protein FLGA precursor [Agrobacterium tumefaciens str.
C58]
Length = 162
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 91/146 (62%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ S + L + + A+VP I GE ++ ++K ++VTN NI YA I +
Sbjct: 17 MCLASAFSLGALAPALAQAPMALVPVRTIYPGEAISPEQVKSVEVTNPNISAGYASDISE 76
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
V G+++++ LLP IP++ L P ++ RG V+++ GNMT+ +G +SD S+G+V+
Sbjct: 77 VEGMISKQTLLPGRTIPIAALREPSLVVRGTSVKLVFHIGNMTLMASGTPMSDGSLGEVV 136
Query: 127 AVKNIDTGVMVSGSVVDTGTVRVVVK 152
V+NID+GVMVSG+V+ GT++V+ K
Sbjct: 137 RVRNIDSGVMVSGTVMKDGTIQVMAK 162
>gi|182680547|ref|YP_001834693.1| flagellar basal body P-ring biosynthesis protein-like protein
[Beijerinckia indica subsp. indica ATCC 9039]
gi|182636430|gb|ACB97204.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Beijerinckia indica subsp. indica ATCC 9039]
Length = 166
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGH----AVVPSVVINAGEVLNESRLKEMQV--TNS 54
+ +RFL LS S V VP+ I G+ + E+ + E + ++
Sbjct: 9 ISSLRFLPLGVAACLSTLSAVHPVEASDALVLPVPTTTIYPGDTIKEAWIIEREFAANST 68
Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
RGN +VG RR LLP IP++ L P + GAKVRI+ + +TI+ G
Sbjct: 69 YARGNVLTERAALVGKAARRTLLPGVPIPINALSEPKAVLNGAKVRIVFMESGLTITAFG 128
Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
AL S+GD ++V+N+D+G+ VSG V G++RV
Sbjct: 129 SALQSGSVGDNVSVRNLDSGLTVSGIVQADGSIRV 163
>gi|116250483|ref|YP_766321.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
leguminosarum bv. viciae 3841]
gi|115255131|emb|CAK06205.1| putative flagellar protein FlgA precursor [Rhizobium leguminosarum
bv. viciae 3841]
Length = 160
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 60/141 (42%), Positives = 95/141 (67%), Gaps = 3/141 (2%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
+++ + +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G+YA SI V G+V
Sbjct: 23 IFLPADVDAG---MGYAVVPTTIIYPGDTLSSSQLQEVEVTNPNLAGDYAKSISQVEGMV 79
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
++R LLP I +S L Y ++RG+ +R++L+ G MTIS AG L D +IG V+ +N+
Sbjct: 80 SKRTLLPGRTISVSGLREAYTVTRGSSIRLVLSLGAMTISAAGTPLEDGTIGQVVRARNM 139
Query: 132 DTGVMVSGSVVDTGTVRVVVK 152
D+GV+VSG+V+ GTV V K
Sbjct: 140 DSGVIVSGTVLADGTVHVRAK 160
>gi|315179622|gb|ADT86536.1| Flagellar basal body P-ring biosynthesis protein [Vibrio furnissii
NCTC 11218]
Length = 233
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 5/147 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C + + ++ AS+ VV + G L S L T + + ++
Sbjct: 88 VRCEEGDTAWRI----NVTIKASLTLPVVVTQTALARGGRLEPSMLALEDRTLTR-QDDF 142
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
I + GL R L ++ +++ +P ++ +G +V II + + ST G+AL D
Sbjct: 143 FTRIDEASGLEVNRRLRAGQILDPTLVSKPPLVIKGNQVVIIAAKDGVNASTKGVALEDG 202
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTV 147
G+ I V+N + +V V V
Sbjct: 203 GRGEQIEVQNSASQSVVHAVVTGLNQV 229
>gi|326319093|ref|YP_004236765.1| flagella basal body P-ring formation protein FlgA [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323375929|gb|ADX48198.1| flagella basal body P-ring formation protein FlgA [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 259
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ CV +++++ + G A V + + +G VL E+ + +V +
Sbjct: 114 LRCVEGATAWNVFLPVTVKAY----GPAWVLTGNVASGAVLTEADATQAEVDWAAETTAI 169
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ ++ VG V R L+ + ++ P GA VR++ ++++AG A++
Sbjct: 170 VANPENWVGQVASRPLMAGQALRQHMVKAPMAFRAGAPVRVVAQGRGYSVTSAGQAVTAG 229
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
SIG+ + V+ +D G +++G V + GTV V +
Sbjct: 230 SIGETVRVR-MDNGRVIAGIVSNDGTVEVGL 259
>gi|323492342|ref|ZP_08097495.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
brasiliensis LMG 20546]
gi|323313389|gb|EGA66500.1| flagellar basal body P-ring biosynthesis protein FlgA [Vibrio
brasiliensis LMG 20546]
Length = 216
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 5/147 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C + + L S+ +++ + +V IN + + + Q T + ++
Sbjct: 71 VSCQSADVDWRL----NVSIKSTLTLNVLVAKSPINRDDSITRDLVTIEQRTLNRE-QDF 125
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
V + R + +I L P ++++G +V I +G + +T G+AL
Sbjct: 126 YTQFDQVRYKLATRRIRSGQIIDGRKLQTPALVAKGNQVIISAGKGGFSATTKGVALEQG 185
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTV 147
+ G I V+NI +G +V V V
Sbjct: 186 AHGQQIEVRNISSGKVVKAVVTGLNQV 212
>gi|86356313|ref|YP_468205.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
etli CFN 42]
gi|86280415|gb|ABC89478.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
Length = 160
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 59/128 (46%), Positives = 90/128 (70%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+G+AVVP+ +I G+ L+ S+L+E++VTN N+ G+YA SI V GLV++R LLP I +
Sbjct: 33 MGYAVVPTTIIYPGDTLSGSQLQEVEVTNPNLAGDYAKSISQVEGLVSKRTLLPGRTISV 92
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
S L PY ++RG+ +R++ + G MTIS AG L D + G V+ +N+D+GV+VSG+V+
Sbjct: 93 SALREPYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQVVRARNMDSGVIVSGTVLAD 152
Query: 145 GTVRVVVK 152
GT+ V K
Sbjct: 153 GTIHVRAK 160
>gi|289666042|ref|ZP_06487623.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
campestris pv. vasculorum NCPPB702]
gi|289670501|ref|ZP_06491576.1| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 214
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I+AGE ++ + + + + I G
Sbjct: 65 NTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVL 124
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA
Sbjct: 125 ADPVAAVGKTARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAG 184
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 185 ENERVSVENSSSRRVVQGIVEASGTVVV 212
>gi|327254550|gb|EGE66166.1| lateral flagellar P-ring addition protein [Escherichia coli
STEC_7v]
Length = 236
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 63/151 (41%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
++ + F + ++ V+ V+ ++ L + ++ S R +
Sbjct: 84 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRDV 143
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ + +GL ++ L P + L P +I R V I+ +T S G+AL +
Sbjct: 144 LMDLNEAIGLSSKHALQPGRPLTKEELVSPVLIERDQPVMIVYQSAGITASMPGVALKNG 203
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+++ V+N + ++S V ++G V V
Sbjct: 204 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 234
>gi|325921019|ref|ZP_08182901.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
gardneri ATCC 19865]
gi|325548501|gb|EGD19473.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
gardneri ATCC 19865]
Length = 214
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I+AGE ++ + + + + I G
Sbjct: 65 NTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVL 124
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RR+L ++ + L ++ RG V ++ G + + +G ALSDA
Sbjct: 125 ADPVAAVGKTARRILPAGSLLSSNDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAG 184
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 185 ENERVSVENSSSRRVVQGIVEASGTVVV 212
>gi|315121846|ref|YP_004062335.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495248|gb|ADR51847.1| flagellar basal body P-ring biosynthesis protein FlgA [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 149
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 102/140 (72%), Positives = 120/140 (85%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
YV L+++ A+ +G AVVPSVVINAGEVL+E +LKE+ VTNSN+RGNYA IKDV GLVT
Sbjct: 10 YVFCLNAVLANGLGRAVVPSVVINAGEVLSELKLKELDVTNSNLRGNYARYIKDVKGLVT 69
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
RR LLPD +I LS LHRPYVISRG KVRIIL QGNMTIS AG+ALSDAS+GD I+VKNID
Sbjct: 70 RRTLLPDRIILLSALHRPYVISRGDKVRIILNQGNMTISAAGVALSDASVGDAISVKNID 129
Query: 133 TGVMVSGSVVDTGTVRVVVK 152
TGV+VSGS +D GTVR+++K
Sbjct: 130 TGVIVSGSALDAGTVRIIIK 149
>gi|283784868|ref|YP_003364733.1| flagellar basal body P-ring protein [Citrobacter rodentium ICC168]
gi|282948322|emb|CBG87905.1| flagellar basal body P-ring protein [Citrobacter rodentium ICC168]
Length = 219
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV + I G L + + + + I + V+ R L
Sbjct: 87 LQVNVQATGNYVVAAAPITRGSKLTPASIALKRGRLDQLPPRTILDINQIQEAVSLRDLA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L++L + + I G +V ++ +++ G AL++A++ V+ + +G +V
Sbjct: 147 PGQPVQLNMLRQDWRIKAGQRVLVVANGDGFSVNAEGQALNNAAVAQNARVRML-SGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 206 SGIVDADGNILINL 219
>gi|241203107|ref|YP_002974203.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240856997|gb|ACS54664.1| flagella basal body P-ring formation protein FlgA [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 160
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 58/141 (41%), Positives = 94/141 (66%), Gaps = 3/141 (2%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
+++ + +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G+YA SI V G+V
Sbjct: 23 IFLPADVDAG---MGYAVVPTTIIYPGDTLSSSQLQEVEVTNPNLAGDYAKSISQVEGMV 79
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
++R LLP I +S L Y ++RG+ +R++L+ G +TIS AG L D + G V+ +N+
Sbjct: 80 SKRTLLPGRTISVSGLREAYTVTRGSSIRLVLSFGALTISAAGTPLEDGTTGQVVRARNM 139
Query: 132 DTGVMVSGSVVDTGTVRVVVK 152
D+GV+VSG+V+ GTV V K
Sbjct: 140 DSGVIVSGTVLADGTVHVRAK 160
>gi|121596113|ref|YP_988009.1| SAF domain-containing protein [Acidovorax sp. JS42]
gi|222112268|ref|YP_002554532.1| flagella basal body p-ring formation protein flga [Acidovorax
ebreus TPSY]
gi|120608193|gb|ABM43933.1| SAF domain protein [Acidovorax sp. JS42]
gi|221731712|gb|ACM34532.1| flagella basal body P-ring formation protein FlgA [Acidovorax
ebreus TPSY]
Length = 250
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ CV +++++ F G A V + + G VL+E E +V +
Sbjct: 105 LRCVDGPTRWNVFLPITVKAF----GPAWVLAGNVGTGAVLSEQDAIEAEVDWAAEPAAI 160
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ KD VG R L + +++ P + G+ VR+++ ++++G A+S
Sbjct: 161 VANPKDWVGQTATRPLSAGQALRQNMVRAPDLFKAGSAVRVVVQGPGYAVTSSGQAMSAG 220
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
+ G + V+ + G ++ G+V++ GT+
Sbjct: 221 AQGQSVRVR-MANGRIIGGTVLEDGTIE 247
>gi|226199833|ref|ZP_03795384.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei Pakistan 9]
gi|225928184|gb|EEH24220.1| flagellar basal body P-ring formation protein FlgA [Burkholderia
pseudomallei Pakistan 9]
Length = 295
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 159 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 214
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 215 ATALTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 274
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 275 -MAAGQIVTAIVKDAATVEI 293
>gi|92114102|ref|YP_574030.1| flageller protein FlgA [Chromohalobacter salexigens DSM 3043]
gi|91797192|gb|ABE59331.1| flagellar protein FlgA [Chromohalobacter salexigens DSM 3043]
Length = 251
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
S +V + I G+ L+ L + S N +G V + L+
Sbjct: 119 VQARVSASVRFLVAATAIQRGQRLSADMLGWERADVSRRPRNALDDPSQAIGKVVMQRLV 178
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ L +PY++ RG V +I +++ G AL++ GD I + D G ++
Sbjct: 179 KGMALRGDRLRQPYLVHRGEAVTLIARGDGFSVTREGEALNNGGKGDAIRARMPD-GQVI 237
Query: 138 SGSVVDTGTVRVV 150
G V G + V
Sbjct: 238 RGEVDAQGRLTVR 250
>gi|311105931|ref|YP_003978784.1| flagella basal body P-ring formation protein FlgA [Achromobacter
xylosoxidans A8]
gi|310760620|gb|ADP16069.1| flagella basal body P-ring formation protein FlgA [Achromobacter
xylosoxidans A8]
Length = 237
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 5/142 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++ YV + SV GH V + +I AG+ L L + + V G
Sbjct: 101 WTAYVQATV----SVPGHYYVAARLIAAGQALTPDDLAPRDGDLIALPPGAITDPQAVAG 156
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + + S L + RGA VRI +S+ G AL +A+ G + V+
Sbjct: 157 MTAVHRINAGQAVRSSGLRNAQSVLRGANVRINARGKGFVVSSEGQALDNAAPGATVQVR 216
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
G +VSG V + V + +
Sbjct: 217 -TAGGQVVSGVVRNASLVEIQL 237
>gi|260597441|ref|YP_003210012.1| flagellar basal body P-ring biosynthesis protein FlgA [Cronobacter
turicensis z3032]
gi|260216618|emb|CBA29909.1| Flagella basal body P-ring formation protein flgA [Cronobacter
turicensis z3032]
Length = 201
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
+ G+ VV S + G LNES L+ + + N ++ VT R L P
Sbjct: 70 QVNVQAFGNYVVASQPVARGGTLNESNLRLERGRLDLLPPNAMLNLDQAREAVTLRDLAP 129
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ + LS++ + + + G +V+II +I+ G AL++A++ V+ + +G +VS
Sbjct: 130 NQPVMLSMVRQSWRVKAGQQVQIIANGEGFSINGEGRALNNAAVAQNARVR-MASGQVVS 188
Query: 139 GSVVDTGTVRVVV 151
G V G + + +
Sbjct: 189 GIVGSDGIILINL 201
>gi|160896083|ref|YP_001561665.1| SAF domain-containing protein [Delftia acidovorans SPH-1]
gi|160361667|gb|ABX33280.1| SAF domain [Delftia acidovorans SPH-1]
Length = 254
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C++ + +++++ G A V + +G L+ + +V +
Sbjct: 110 LRCLQGAVAWNVFLPITVKA----WGPAWVLQNGVPSGRPLSADDAVQAEVDWAEESAAV 165
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ +D VGLV R L + ++L P + + GA+VR+++ G +++++G A+S A
Sbjct: 166 YANQQDWVGLVASRPLAAGQALRQNMLRTPALFAVGAEVRVLVNGGGFSVTSSGKAMSAA 225
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G + V+ +D G ++SG V G V V
Sbjct: 226 GEGQTVRVR-MDNGRLISGVVNPEGVVLV 253
>gi|167574682|ref|ZP_02367556.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
oklahomensis C6786]
Length = 229
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 59/140 (42%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I+ GE L+ + L + + + VG
Sbjct: 93 WTIYLQAKLAVQA----TYYVAARQISPGEALSAADLVARDGDLTMLPLAVITDPTEAVG 148
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 149 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 208
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 209 -MAAGQIVTAIVKDAATVEI 227
>gi|189426329|ref|YP_001953506.1| flagella basal body P-ring formation protein FlgA [Geobacter
lovleyi SZ]
gi|189422588|gb|ACD96986.1| flagella basal body P-ring formation protein FlgA [Geobacter
lovleyi SZ]
Length = 243
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 55/132 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
L V S + AG VL E+ L+ + + G +I D VG R +
Sbjct: 110 LRLLIDAQTEMVTASRQLLAGTVLTEADLQLQKQDLAQAGGLPVKNITDAVGKKLRITVR 169
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
I + L V+ G V II + I+ +G A S +G++I V+N+ + +
Sbjct: 170 AGTPIRSNQLVSVPVVVSGQLVTIIAENAGVRITVSGRARSAGGVGELIRVQNLVSNKEI 229
Query: 138 SGSVVDTGTVRV 149
VVD TV V
Sbjct: 230 PARVVDASTVEV 241
>gi|312884838|ref|ZP_07744530.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309367490|gb|EFP95050.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 265
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ +S+ VV IN + L + + T + + + + DV+ T R
Sbjct: 130 RINVTVKSSLTLDVVVAKTGINRDQALTPDSVHLVPRTLT-HQQEFYTHVSDVLEKTTTR 188
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ H+I L+ P ++ G +V I ++ + +T GIAL + G+ I V+N+ +G
Sbjct: 189 RIRSGHIITPKTLNAPAMVEVGNQVIISASKDRFSATTKGIALEKGNKGEQITVQNVSSG 248
Query: 135 VMVSGSVVDTGTVR 148
+ +V+ V+
Sbjct: 249 KTIQATVIGHNKVQ 262
>gi|218549200|ref|YP_002382991.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
fergusonii ATCC 35469]
gi|218356741|emb|CAQ89369.1| Flagella basal body P-ring formation protein flgA precursor
[Escherichia fergusonii ATCC 35469]
Length = 236
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV + I G V+N S + + + + V ++ R +
Sbjct: 104 LQVNVQASGNYVVAAAPITRGGVVNASNVTLKRGRLDQLPPRTVLEVAQVQDAISLRDIA 163
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L++L + + I G +V++I ++ G AL++A++ V+ + +G +V
Sbjct: 164 PGQPVQLNMLRQAWRIKAGQRVQVIAQGDGFNVNAEGQALNNAAVAQTARVRML-SGQVV 222
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 223 SGIVGADGNILINL 236
>gi|288958676|ref|YP_003449017.1| FlgA protein [Azospirillum sp. B510]
gi|288910984|dbj|BAI72473.1| FlgA protein [Azospirillum sp. B510]
Length = 259
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 60/136 (44%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V S A + V S I G+V+ + V + A + ++G+ +
Sbjct: 116 VRLPVSGRAFGVVQIPVLSRRIIPGDVIGPGDIDWQDVRADQTTSDTAATDAQLIGMTPK 175
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + + L L P +I +GA V I LT +MT++T G AL D G+VI V N +
Sbjct: 176 RGVSTNQPVRLRDLQSPRMIDKGAMVTITLTTPSMTLTTQGKALQDGGKGEVIRVVNTQS 235
Query: 134 GVMVSGSVVDTGTVRV 149
+V +V V V
Sbjct: 236 NRIVEATVAGPNVVAV 251
>gi|332704822|ref|ZP_08424910.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
africanus str. Walvis Bay]
gi|332554971|gb|EGJ52015.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
africanus str. Walvis Bay]
Length = 328
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 53/141 (37%), Gaps = 2/141 (1%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
L ++F S +N GE + + + + RG
Sbjct: 190 GRLVRQVAANVFVDHWVAVACASRPVNPGEAITPDMVTFQEKNLAYFRGAPWDGKGGP-- 247
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + + L +L ++ +G+ V ++ ++ ++ A+ +G+ I V+
Sbjct: 248 WQVKRPVGTEQPFSLDILEPVPLVVKGSTVNLVYQGRHVQLAIQAEAMQAGGLGETIPVR 307
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
NI +G +V V+ TV V
Sbjct: 308 NIHSGKLVQAVVMSKDTVAVR 328
>gi|167717655|ref|ZP_02400891.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
pseudomallei DM98]
Length = 184
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 48 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARNGDLTLLPLAVITDAQQAVG 103
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 104 ATALMRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 163
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 164 -MAAGQIVTAIVKDAATVEI 182
>gi|325927870|ref|ZP_08189094.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
perforans 91-118]
gi|325541710|gb|EGD13228.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
perforans 91-118]
Length = 214
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 61/148 (41%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I+AGE ++ + + + + I G
Sbjct: 65 NTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVL 124
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RRVL ++ + L ++ RG V ++ G + + +G ALSDA
Sbjct: 125 ADPVAAVGKTARRVLPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAG 184
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 185 ENERVSVENSSSRRVVQGIVEASGTVVV 212
>gi|162218050|ref|YP_622284.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
cenocepacia AU 1054]
gi|162227931|ref|YP_836667.2| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
cenocepacia HI2424]
Length = 310
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L+ + L + + +G
Sbjct: 174 WTVYLQAKVAVQA----TYYVAARQIAPGEPLSAADLVARDGDLTVMPLAVITDPAQAIG 229
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ TIS G L++A+ G + V+
Sbjct: 230 ATALARISAGLPLRQDMLKSAASVSAGQTVRVVAAGPGFTISAEGSVLANAAPGQSVRVR 289
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D GTV +
Sbjct: 290 -MAAGQIVTAIVKDAGTVEI 308
>gi|156934444|ref|YP_001438360.1| flagellar basal body P-ring biosynthesis protein FlgA [Cronobacter
sakazakii ATCC BAA-894]
gi|156532698|gb|ABU77524.1| hypothetical protein ESA_02275 [Cronobacter sakazakii ATCC BAA-894]
Length = 219
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
+ G+ VV S + G +L+ES ++ + + N ++ VT R L
Sbjct: 88 QVNVQAFGNYVVASQPVARGGMLDESNVRLERGRLDLLPPNAMLNLDQAREAVTLRDLAA 147
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ + LS++ + + + G +V+I+ +I+ G AL++A++ V+ + +G +VS
Sbjct: 148 NQPVMLSMVRQSWRVKAGQQVQILANGEGFSINGEGRALNNAAVAQNARVR-MASGQVVS 206
Query: 139 GSVVDTGTVRVVV 151
G V G + + +
Sbjct: 207 GIVGSDGIILINL 219
>gi|170021364|ref|YP_001726318.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
ATCC 8739]
gi|188492061|ref|ZP_02999331.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
53638]
gi|169756292|gb|ACA78991.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
ATCC 8739]
gi|188487260|gb|EDU62363.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
53638]
Length = 245
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 62/151 (41%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
++ + F + ++ V+ V+ ++ L + ++ S R +
Sbjct: 93 LNRMNFTVSCPQSWQMNVAVRPDVLVPVVMTKSLVARDTPLTANDVELKPYNVSAQRRDV 152
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ D +G ++ L P I L P ++ R V I+ ++ S G+AL +
Sbjct: 153 LMVLDDAIGFSSKHALQPGRPITKEELVSPVLVGRDQPVMIVYQSAGISASMPGVALKNG 212
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G+++ V+N + ++S V ++G V V
Sbjct: 213 RKGEMVKVRNASSQRVISAMVAESGVVTTVS 243
>gi|197120122|ref|YP_002140549.1| flagellar basal body P-ring formation protein FlgA [Geobacter
bemidjiensis Bem]
gi|197089482|gb|ACH40753.1| flagellar basal body P-ring formation protein FlgA [Geobacter
bemidjiensis Bem]
Length = 246
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ + VV + + GEVL S L + S RG Y + GL + +
Sbjct: 112 TVQVEVEALADMVVAARTLERGEVLLASDLSVAKRDLSLARGGYLKEPDEAAGLRVKATM 171
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ + L + V+ G V I+ + ++ +G A + GDVI V+N+ +
Sbjct: 172 RANTPVRKDNLEKVPVVKSGQMVTILAENDVVKVTASGRAKGAGAPGDVITVQNLSSQKE 231
Query: 137 VSGSVVDTGTVRV 149
++ VVD TV+V
Sbjct: 232 IAARVVDAATVKV 244
>gi|51246534|ref|YP_066418.1| flagellar protein (FlgA) [Desulfotalea psychrophila LSv54]
gi|50877571|emb|CAG37411.1| related to flagellar protein (FlgA) [Desulfotalea psychrophila
LSv54]
Length = 315
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
+ F + + I +V + L+ + ++ SNI +
Sbjct: 168 SIIFKIDGKVQKNLSIRGKLKAIAPVLVAREALRRDTELSPNNFSIIRRDISNI-SDPLF 226
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S + G RR + D VI S L V+ RG +V+I L GN+ + T G+A +D +
Sbjct: 227 SARQAEGQRLRRRIRKDDVIRASSLEHVPVVHRGDRVKIHLLSGNLQVVTLGVARADGGV 286
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
D I V+NI++ ++ VV G V+V +
Sbjct: 287 HDFIRVQNINSKKIIYCQVVAPGIVKVKL 315
>gi|290474968|ref|YP_003467852.1| basal-body periplasmic P ring assembly protein [Xenorhabdus
bovienii SS-2004]
gi|289174285|emb|CBJ81075.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring
[Xenorhabdus bovienii SS-2004]
Length = 223
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
++ V G ++ + I VL E + + + + K + + R +
Sbjct: 90 FIQVYVGVTGSYLMSNRAIQRNTVLTEKDFQVKTGALDKLPNDIIRNRKVIQNGIAIRNI 149
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
I +++ RP+ I G V +I+ + + G A+++A+ D I V+ + +G +
Sbjct: 150 PAGQFITRNMIRRPWAIRAGQNVVVIVDGHHFQVRYEGKAINNAASFDNIRVR-LASGQV 208
Query: 137 VSGSVVDTGTVRVVV 151
++G + G+V++++
Sbjct: 209 ITGETQENGSVKMML 223
>gi|52208324|emb|CAH34257.1| putative flagella basal body P-ring formation protein [Burkholderia
pseudomallei K96243]
Length = 307
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 171 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTLLPLAVITDAQQAVG 226
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 227 ATALTRVAAGLPLRRDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 286
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 287 -MAAGQIVTAIVKDAATVEI 305
>gi|224825773|ref|ZP_03698877.1| flagella basal body P-ring formation protein FlgA [Lutiella
nitroferrum 2002]
gi|224601997|gb|EEG08176.1| flagella basal body P-ring formation protein FlgA [Lutiella
nitroferrum 2002]
Length = 240
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
++ A + +V + ++AG+VL ++ Q + HS + VGL +R L
Sbjct: 110 TVRAELDARQLVATRDLDAGKVLGADDVEWAQRPVYELEEG-LHSPAEAVGLSSRSALRR 168
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ +L ++ RG V I+ ++ + ++ G +L DVI V+N+ +G ++
Sbjct: 169 GQPLRRKLLEAVVLVRRGDAVEIVASKEAIVVTAPGESLESGRRNDVIRVRNVGSGKILR 228
Query: 139 GSVVDTGTV 147
V + G V
Sbjct: 229 ARVTEAGRV 237
>gi|296103615|ref|YP_003613761.1| Flagella basal body P-ring formation protein FlgA [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295058074|gb|ADF62812.1| Flagella basal body P-ring formation protein FlgA [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 232
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 1/148 (0%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
R +L + S G V S + G ++ S ++ + + G +
Sbjct: 85 RTVLAQCGARRHFLPVRISAQGTWWVASQSLPGGAIVQRSDIEPVTGNLDHQPGGLIFNA 144
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
+++G R + + + L + + + G V ++ T I + G AL++A++ D
Sbjct: 145 DEIIGQRLTRAIDAGKPLLENQLRQQWRLRAGQTVDLVTTGAGFRIRSQGKALNNAAVDD 204
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
V+ VK + G VSG V G V ++ +
Sbjct: 205 VLKVKTVG-GRTVSGKVGADGQVMIISQ 231
>gi|322421661|ref|YP_004200884.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
M18]
gi|320128048|gb|ADW15608.1| flagella basal body P-ring formation protein FlgA [Geobacter sp.
M18]
Length = 238
Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 60/133 (45%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ + VV + + GEVL+ S L ++ + ++G Y I + GL + L
Sbjct: 104 TVLVEVEALAEMVVAARTLERGEVLSASDLAVVKRDLAQVQGRYFKEIGEAAGLRVKSTL 163
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ + L + ++ G V I+ + I+ G A + GD+I V+N+ +
Sbjct: 164 KANSPVRKDNLEKVPIVKSGQVVTIVAENDVVRITATGRAKVAGAQGDLITVQNLSSQKE 223
Query: 137 VSGSVVDTGTVRV 149
++ VVD TV+V
Sbjct: 224 IAARVVDAATVKV 236
>gi|170737034|ref|YP_001778294.1| flagella basal body P-ring formation protein FlgA [Burkholderia
cenocepacia MC0-3]
gi|169819222|gb|ACA93804.1| flagella basal body P-ring formation protein FlgA [Burkholderia
cenocepacia MC0-3]
Length = 252
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ + A + +V + + +G LNE+ K V + + + VG + R
Sbjct: 113 RATTYLVKAHIDAPVLVATTALRSGHTLNEADFK-QDVRDFALTPDALTDPALAVGRMLR 171
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + VI +L+ I RG V+I G + +S G A+ + ++ +VI VKN T
Sbjct: 172 RTVKAGQVIQARLLNGAETIRRGQAVQIEANTGPIRVSVPGTAMQNGAVDEVIRVKNAST 231
Query: 134 GVMVSGSVVDTGTVR 148
G ++ V TV
Sbjct: 232 GKVIFARVTGADTVE 246
>gi|209695768|ref|YP_002263698.1| flagellar basal body P-ring biosynthesis protein FlgA [Aliivibrio
salmonicida LFI1238]
gi|208009721|emb|CAQ80025.1| polar flagellar basal-body P-ring formation protein FlgA
[Aliivibrio salmonicida LFI1238]
Length = 248
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV A ++ V + ++ G L+ + L V + R + D++G
Sbjct: 114 WKIYVPVK----AELMMPLVTAATSLSKGLTLSANDLNLTLVNSRTYRRGGYINTNDLIG 169
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + V+ + + ++ R V I +G ++I T G AL DA++GD + V+
Sbjct: 170 SRIKRSVRAGDVVEKNDI---CMVCRNDSVIIKAVKGELSILTKGTALGDAALGDNVNVQ 226
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N + +++G V G + +
Sbjct: 227 NNKSKRIINGVVTAVGEISIR 247
>gi|325918872|ref|ZP_08180949.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
vesicatoria ATCC 35937]
gi|325534909|gb|EGD06828.1| flagella basal body P-ring formation protein FlgA [Xanthomonas
vesicatoria ATCC 35937]
Length = 214
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 61/148 (41%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I+AGE ++ + + + + I G
Sbjct: 65 NTVEVSCPQPAGWRLFVPLKVRRNQDVLVLRRGISAGETISLADISIEKRDAARIVGAVL 124
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RRVL ++ + L ++ RG V ++ G + + +G ALSDA
Sbjct: 125 ADPVAAVGKSARRVLPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMSGRALSDAG 184
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 185 ENERVSVENSSSRRVVQGIVEASGTVVV 212
>gi|294635606|ref|ZP_06714083.1| flagella basal body P-ring formation protein FlgA [Edwardsiella
tarda ATCC 23685]
gi|291091058|gb|EFE23619.1| flagella basal body P-ring formation protein FlgA [Edwardsiella
tarda ATCC 23685]
Length = 227
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
V G V +N G+ L+ ++ + Q + + + G R +
Sbjct: 99 VQVTGRYPVTVKALNRGQNLSATQFRLTQGRLDTLPPGTILDLTRLEGATVLRNIGAGQP 158
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
I +++ R +VI G +V+I+ +S+ G A+++A++ DV+ + +G ++SG
Sbjct: 159 IAATMVRRTWVIRAGQQVQILAQGDGFNVSSEGRAMNNAALADVVRAR-TASGQVISGKA 217
Query: 142 VDTGTVRVVV 151
GT+ V +
Sbjct: 218 SGPGTLSVTL 227
>gi|291085566|ref|ZP_06353375.2| flagella basal body P-ring formation protein FlgA [Citrobacter
youngae ATCC 29220]
gi|291071317|gb|EFE09426.1| flagella basal body P-ring formation protein FlgA [Citrobacter
youngae ATCC 29220]
Length = 267
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV + + G L + + + + + V V+ R L+
Sbjct: 135 LQVNVQATGNYVVAAAPVARGSALTPASVTLKRGRLDQLPPRAVLDLNQVQDAVSLRDLV 194
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I LS+L + + I G +V +I ++ G AL++A++ V+ I +G +V
Sbjct: 195 PGQPIQLSMLRQAWRIKAGQRVLVIANGEGFRVNAEGKALNNAAVAQNARVRMI-SGQVV 253
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 254 SGVVDSDGNILINL 267
>gi|224826244|ref|ZP_03699346.1| flagella basal body P-ring formation protein FlgA [Lutiella
nitroferrum 2002]
gi|224601345|gb|EEG07526.1| flagella basal body P-ring formation protein FlgA [Lutiella
nitroferrum 2002]
Length = 228
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+SL + + +G VV + + AGE+L ++ ++T+ + N + + +G
Sbjct: 92 WSLRLPVTIA--EKRMG--VVATRPLKAGELLAPDDVRLAEMTSPALSRNVLNRLDQAIG 147
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R + + +L +P VI +V+++ + G A +A+ G+ + V+
Sbjct: 148 QSMRSSVPAGAWLRSFMLQQPDVIRTNQRVKVLAQGDGFVATAEGTARGNAAAGESVRVR 207
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ +G VSG G+V V
Sbjct: 208 -MASGREVSGVAQADGSVLV 226
>gi|115523555|ref|YP_780466.1| flagellar basal body P-ring biosynthesis protein FlgA
[Rhodopseudomonas palustris BisA53]
gi|115517502|gb|ABJ05486.1| flageller protein FlgA [Rhodopseudomonas palustris BisA53]
Length = 352
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 8/157 (5%)
Query: 2 DCVRFLLFFSLY-------VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS 54
RF + F + + A V + EV+ S + + +
Sbjct: 170 RSGRFEVSFEIADETGLAPTKLRFTGTAIETVETAVLLRGLERNEVVKASDVVLERRPKA 229
Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
+ G+ V+G+ RR L + + L +P ++ R V + + ++ G
Sbjct: 230 EVGGDVL-GRDGVIGMQARRSLRAGQPLRGADLGKPDLVQRDQGVTLTYETTGIYLTVRG 288
Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
A+ + + GDV+ V N+ + VSG V+ G V +
Sbjct: 289 KAMENGAEGDVVNVVNLQSKRTVSGIVIGRGQVSISA 325
>gi|325295400|ref|YP_004281914.1| flagella basal body P-ring formation protein FlgA
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065848|gb|ADY73855.1| flagella basal body P-ring formation protein FlgA
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 321
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+L ++ A + I G+++ S +K +V + R + S+ +V+G
Sbjct: 180 GNLVKKIWITVKIDRKREATIAVKDIPKGKLITYSDVKIEKVPSKKARKSAI-SLNEVIG 238
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ +R + VI ++ L YV+ R V+II N+ I GIAL + +IGD+I +K
Sbjct: 239 KIAKRDIKKGEVIKITDLSPNYVVWRNKPVKIIYDIHNIHIELLGIALENGAIGDIIRIK 298
Query: 130 NIDTGVMVSGSVVDTGTVRVVVK 152
NI TG ++ V+ G V+ V K
Sbjct: 299 NISTGKVLICKVIGNGIVKFVYK 321
>gi|119469944|ref|ZP_01612749.1| putative flagellar biosynthesis; assembly of basal-body periplasmic
P-ring [Alteromonadales bacterium TW-7]
gi|119446654|gb|EAW27927.1| putative flagellar biosynthesis; assembly of basal-body periplasmic
P-ring [Alteromonadales bacterium TW-7]
Length = 235
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + I GEV+ + + +R Y K ++G ++R + I L
Sbjct: 112 MAPVVVTTDNIARGEVITSAHITVEMKPTHFVRVQYQDDPKALIGSRSKRNIREGMPILL 171
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
+ + ++ +G + I + + I T G+AL D ++G+ I V+N TG +++ V
Sbjct: 172 NQI---CMVCKGDAINIYASTKGLQIKTTGVALEDGTLGEQILVENKKTGKVLNARVDGV 228
Query: 145 GTVRV 149
+V+V
Sbjct: 229 ESVQV 233
>gi|260431747|ref|ZP_05785718.1| flagella basal body P-ring formation protein FlgA [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415575|gb|EEX08834.1| flagella basal body P-ring formation protein FlgA [Silicibacter
lacuscaerulensis ITI-1157]
Length = 138
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 6/138 (4%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
L V L LFA + VVP+ I A EV+ LK + +VG
Sbjct: 6 LMVCLLCPLFAQ--ANVVVPTRTIRAKEVITAEDLKIQPGDVA----GAVEDPDLLVGQE 59
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
R L P I S + P V+ R V ++ + +TI G AL ++G+ I N+
Sbjct: 60 ARIALYPGRPIRASDVRAPAVVDRNDLVTLVFVKNGLTIEVEGRALGRGAVGERIRAMNL 119
Query: 132 DTGVMVSGSVVDTGTVRV 149
+ V+G V G + V
Sbjct: 120 SSRSAVTGKVGPDGQIEV 137
>gi|256020224|ref|ZP_05434089.1| flagella basal body P-ring formation protein FlgA [Shigella sp. D9]
gi|260853462|ref|YP_003227353.1| putative lateral flagellar P-ring addition protein [Escherichia
coli O26:H11 str. 11368]
gi|260866409|ref|YP_003232811.1| putative lateral flagellar P-ring addition protein [Escherichia
coli O111:H- str. 11128]
gi|307313523|ref|ZP_07593144.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
W]
gi|331666542|ref|ZP_08367416.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
TA271]
gi|332281386|ref|ZP_08393799.1| lateral flagellar P-ring addition protein [Shigella sp. D9]
gi|257752111|dbj|BAI23613.1| predicted lateral flagellar P-ring addition protein [Escherichia
coli O26:H11 str. 11368]
gi|257762765|dbj|BAI34260.1| predicted lateral flagellar P-ring addition protein [Escherichia
coli O111:H- str. 11128]
gi|306906691|gb|EFN37202.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
W]
gi|315059538|gb|ADT73865.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli W]
gi|323158107|gb|EFZ44206.1| lateral flagellar P-ring addition protein [Escherichia coli
EPECa14]
gi|323178498|gb|EFZ64076.1| lateral flagellar P-ring addition protein [Escherichia coli 1180]
gi|323379903|gb|ADX52171.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
KO11]
gi|331065766|gb|EGI37650.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
TA271]
gi|332103738|gb|EGJ07084.1| lateral flagellar P-ring addition protein [Shigella sp. D9]
Length = 245
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 58/134 (43%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ V+ V+ ++ L + ++ S R + + D +GL ++ L
Sbjct: 110 VAVRPDVLVPVVMTKSLVARDMPLTANDVELKPYNVSAQRRDVLMELDDAIGLSSKHALQ 169
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I L P ++ R V I+ +T S G+AL + G+++ V+N + ++
Sbjct: 170 PGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVI 229
Query: 138 SGSVVDTGTVRVVV 151
S V ++G V V
Sbjct: 230 SAMVAESGVVTTVS 243
>gi|34497155|ref|NP_901370.1| flagella basal body P-ring formation protein flgA [Chromobacterium
violaceum ATCC 12472]
gi|34103012|gb|AAQ59375.1| probable flagella basal body P-ring formation protein flgA
[Chromobacterium violaceum ATCC 12472]
Length = 236
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Query: 34 VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
+ AG L + + + + GL +R L D + L P +
Sbjct: 120 DLPAGVALAPQDVAWARRPVGD-PADLFGQASPPQGLASRTPLRQDQPLRRRQLQPPQWV 178
Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
RG V I+ Q + +++AG AL++ G+VI V+N + +++ V G V
Sbjct: 179 KRGDAVSIVARQDGIEVTSAGEALANGRQGEVIRVRNTSSNKIINARVSAQGEV 232
>gi|78358197|ref|YP_389646.1| FlgA family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220602|gb|ABB39951.1| FlgA family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 343
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 59/149 (39%), Gaps = 2/149 (1%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ + + S+F V + +N G++L + ++ + +RG+
Sbjct: 196 LRLAEVRPTGDVVRQATGSVFVDVWTGVPAAAFPVNRGDLLGPDAVTMVRKNRAFMRGDP 255
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
R + VI + L ++RG +V ++ + ++ AL+D
Sbjct: 256 WDGKGGP--WRLTRAVGQGQVIYAADLEIMPTVARGDRVDLVFRGSRILLTVPAEALADG 313
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ GD I V+N+ + V +V D TV V
Sbjct: 314 AAGDSIPVRNLQSRRQVYATVKDPTTVIV 342
>gi|163852463|ref|YP_001640506.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
extorquens PA1]
gi|163664068|gb|ABY31435.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
extorquens PA1]
Length = 348
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
++ + A V + +N GE + + L + + + +
Sbjct: 189 LVVLGERQASLRVAGVAVETREVAVLTRSLNRGEAIASADLTVERRPRDGVPNDVQGAPT 248
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
VVG V +R L V+ + P +++RG V I+ +++S GIA +G
Sbjct: 249 LVVGQVAQRPLSAGAVLRSGDVAPPDLVARGDSVAIVFETPGVSLSLRGIANECGRLGAS 308
Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149
++V N + ++ V+ G V V
Sbjct: 309 VSVTNAASKKVLQAVVIAPGRVSV 332
>gi|327537338|gb|EGF24071.1| LfgA (potential lateral flagellar protein FlgA) [Rhodopirellula
baltica WH47]
Length = 476
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 52/125 (41%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
VV + G + + + + G+ + +V+G+ ++ + S
Sbjct: 335 VVVARRPLQRGHRVGPGDVHFQPSPVNELSGDRVMDVDEVMGMEVVGLIRSGVPLRPSDF 394
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
P ++ RG V + ++ G + ++T AL D + ++I ++ + + VV+ V
Sbjct: 395 AAPRLVRRGDLVEVQVSGGGIRVTTTAKALGDGAHNELIEIETLSPKRRLLAKVVEPSVV 454
Query: 148 RVVVK 152
+V +
Sbjct: 455 EIVTQ 459
>gi|32477361|ref|NP_870355.1| LfgA (potential lateral flagellar protein FlgA) [Rhodopirellula
baltica SH 1]
gi|32447912|emb|CAD77432.1| similar to LfgA (potential lateral flagellar protein similar to
FlgA) [Rhodopirellula baltica SH 1]
Length = 477
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 52/125 (41%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
VV + G + + + + G+ + +V+G+ ++ + S
Sbjct: 336 VVVARRPLQRGHRVGPGDVHFQPSPVNELSGDRVMDVDEVMGMEVVGLIRSGVPLRPSDF 395
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
P ++ RG V + ++ G + ++T AL D + ++I ++ + + VV+ V
Sbjct: 396 AAPRLVRRGDLVEVQVSGGGIRVTTTAKALGDGAHNELIEIETLSPKRRLLAKVVEPSVV 455
Query: 148 RVVVK 152
+V +
Sbjct: 456 EIVTQ 460
>gi|77748624|ref|NP_642314.2| flagellar basal body P-ring biosynthesis protein FlgA [Xanthomonas
axonopodis pv. citri str. 306]
Length = 214
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 59/148 (39%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ V L +V I AGE ++ + + + + I G
Sbjct: 65 NTVEVACPQPAGWRLFVPLKVRRNQDVLVLRRGIGAGETISLADISIEKRDAARIVGAVL 124
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
VG RR+L ++ + L ++ RG V ++ G + + G ALSDA
Sbjct: 125 ADPVAAVGKTARRILPAGSLLSANDLVTQRLVRRGDTVPLVSRNGGLEVRMTGRALSDAG 184
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ ++V+N + +V G V +GTV V
Sbjct: 185 ENERVSVENSSSRRVVQGIVEASGTVVV 212
>gi|87119683|ref|ZP_01075580.1| flagellar protein, putative [Marinomonas sp. MED121]
gi|86165159|gb|EAQ66427.1| flagellar protein, putative [Marinomonas sp. MED121]
Length = 242
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 60/137 (43%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
S + ++ AV I + +NES +V + +RG + GL+
Sbjct: 104 VWQSFLPVSQKILVSAVKAITPIRRKQTINESNTVIAKVDLTQVRGQIYSPNQAPYGLIA 163
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
+R + + I + P ++ RG + I G + + GIA D ++G I VKNI
Sbjct: 164 KRNININTFITKQLTELPIIVKRGQNILISAQSGQINVRMNGIAAEDGTLGQQIKVKNIS 223
Query: 133 TGVMVSGSVVDTGTVRV 149
+G V G VV G +RV
Sbjct: 224 SGRFVYGKVVSEGEIRV 240
>gi|227356005|ref|ZP_03840397.1| flagella basal body P-ring formation protein [Proteus mirabilis
ATCC 29906]
gi|227163993|gb|EEI48895.1| flagella basal body P-ring formation protein [Proteus mirabilis
ATCC 29906]
Length = 218
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ SV G +V IN +V+ +S +K ++ + + + + R +
Sbjct: 85 FIQVDVSVYGQYLVAKKEINRDDVITKSSIKIIKGDLEKLPYDVLRDAVFIKNAIAMRHI 144
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ I +++ RP+ I G V + + I G A+++A + I ++ + +G +
Sbjct: 145 ATEKPITSTMVRRPWAILAGQTVTVFAQGDHFQIRYEGKAINNAVANESIRIR-VKSGQI 203
Query: 137 VSGSVVDTGTVRV 149
++G ++ G+VR+
Sbjct: 204 ITGEALENGSVRI 216
>gi|218531219|ref|YP_002422035.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
chloromethanicum CM4]
gi|218523522|gb|ACK84107.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
chloromethanicum CM4]
Length = 348
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
++ + A V + +N GE + + L + + + +
Sbjct: 189 LVVLGERQASLRVAGVAVETREVAVLTRSLNRGEAVASADLTVERRPRDGVPNDVQGAPT 248
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
VVG V +R L V+ + P +++RG V I+ +++S GIA +G
Sbjct: 249 LVVGQVAQRPLSAGAVLRSGDVAPPDLVARGDSVAIVFETPGVSLSLRGIANESGRLGAS 308
Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149
++V N + ++ V+ G V V
Sbjct: 309 VSVTNAASKKVLQAVVIAPGRVSV 332
>gi|126738577|ref|ZP_01754282.1| flagellar basal-body P-ring formation protein FlgA [Roseobacter sp.
SK209-2-6]
gi|126720376|gb|EBA17082.1| flagellar basal-body P-ring formation protein FlgA [Roseobacter sp.
SK209-2-6]
Length = 138
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 9/147 (6%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
++ LL F + V + S + +VP I A E++ + L +V
Sbjct: 1 MKHLLAFLIAVTAQ-----SALADILVPLRTIRAKEIIQATDLTFKKVNL----PGALSD 51
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
VVG+ R L P + + P ++ R V + QG +TI T G +L S G
Sbjct: 52 ANVVVGMEARVALYPGRPMRAGDIGPPAIVDRNDLVTLAYRQGGLTIITEGRSLGRGSEG 111
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
++I V N+ + V+G + G+V V
Sbjct: 112 EIIKVMNLASRSTVTGRINADGSVEVR 138
>gi|260886212|ref|ZP_05897475.1| putative flagella basal body P-ring formation protein FlgA
[Selenomonas sputigena ATCC 35185]
gi|330839792|ref|YP_004414372.1| flagella basal body P-ring formation protein FlgA [Selenomonas
sputigena ATCC 35185]
gi|260863931|gb|EEX78431.1| putative flagella basal body P-ring formation protein FlgA
[Selenomonas sputigena ATCC 35185]
gi|329747556|gb|AEC00913.1| flagella basal body P-ring formation protein FlgA [Selenomonas
sputigena ATCC 35185]
Length = 244
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 67/146 (45%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
V LL Y +L V +V S + + L+E+ ++ + + +RG
Sbjct: 97 VSVLLDGRPYRRALSYYTVRVYDTVLVASRNLFPEQALSEADMRFEEREVTRVRGRCLKD 156
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+V+G V R++ V+ +L +P V+ GA V I+ + + +G+AL+ +G
Sbjct: 157 KGEVLGHVVSRMVQEGAVLSEDLLRQPVVMESGAAVTIVSRYNGIEVRVSGVALTRGRVG 216
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
I V+N + ++ V+D TV +
Sbjct: 217 QKIRVRNAASRKVMLARVLDASTVEI 242
>gi|260779351|ref|ZP_05888243.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605515|gb|EEX31810.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
coralliilyticus ATCC BAA-450]
Length = 265
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++ +++ + VV IN + ++ LK + T + ++ + V G+V R
Sbjct: 130 RINVAIKSALTLNVVVTKTGINRDQAISPMNLKLEKRTLNRE-QDFFTQLSQVSGMVASR 188
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ ++ L ++++G +V I ++ T ST G+AL + G+ I V+N +G
Sbjct: 189 RIRSGQILDPRKLESTPLVAKGNQVVITASKNGFTASTKGVALEQGTRGEQIDVQNSSSG 248
Query: 135 VMVSGSVVDTGTVR 148
++ V V+
Sbjct: 249 KVIKAVVTGLNQVQ 262
>gi|302037629|ref|YP_003797951.1| putative flagella basal body P-ring formation protein FlgA
[Candidatus Nitrospira defluvii]
gi|300605693|emb|CBK42026.1| putative Flagella basal body P-ring formation protein FlgA
[Candidatus Nitrospira defluvii]
Length = 265
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 65/146 (44%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ + + + I VVP I E + + ++ +++ + S
Sbjct: 118 IHLAVNGRFIKTIDATADVAAIVEVVVPVRSIKVDEEIAADDVTTERIVLYDLKQPFVTS 177
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+V+G R L P + I + + RP+ + +G +V I QG ++I T G+ S +G
Sbjct: 178 PAEVIGKAAIRPLPPQNAIRTTSVRRPFAVHKGDRVTIEARQGGLSIQTVGVTKSHGELG 237
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
I V N+D+G + +VV G VRV
Sbjct: 238 QTITVSNVDSGKELRATVVAPGVVRV 263
>gi|91776305|ref|YP_546061.1| flageller protein FlgA [Methylobacillus flagellatus KT]
gi|91710292|gb|ABE50220.1| flagellar protein FlgA [Methylobacillus flagellatus KT]
Length = 235
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 5/141 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++YV + V+ +V + + G ++ E L + + + +G
Sbjct: 99 WTIYVQANV----QVMAEYLVAAAPLAQGHIITEQDLAKSHGDLAKLPPGVFTDASQAIG 154
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
L V+ +L V+ +G KV + +S G AL+ A G + VK
Sbjct: 155 RAVYVPLSAGTVLRQEMLRVLPVVQQGQKVILNTMGEGFKVSAEGTALTSAGDGQRVKVK 214
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
+ G +VSG G + V+
Sbjct: 215 -VGNGRVVSGLARRGGLIEVI 234
>gi|91204382|emb|CAJ70882.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
Length = 339
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG-NYAH 62
VR L Y VV + IN ++L + ++ +++ G
Sbjct: 191 VRIYLDEKQYHKIPMYFTIRRYEEIVVANRKINRNDILTTKDICIKRIETTSMPGFTTID 250
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
S++ ++G + P + +++ P VI +G V+I++ GN++I T G+A D
Sbjct: 251 SVEPLLGKRVLYTIPPGKPLTQNMVDDPAVIKKGELVKILVKIGNLSILTKGVAKEDGYK 310
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G I V N+DT + G V D TV++++
Sbjct: 311 GRAIKVMNLDTKKELYGEVQDDCTVKIIL 339
>gi|269103194|ref|ZP_06155891.1| flagellar basal-body P-ring formation protein FlgA [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268163092|gb|EEZ41588.1| flagellar basal-body P-ring formation protein FlgA [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 231
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV L VV SV + G VL+++ L + + RG S + + G
Sbjct: 97 WQVYVPVRVQLLLPR----VVASVPLGRGMVLSQNNLTVALIESRFQRGAIYQSPQALFG 152
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + + + + ++ R KV I Q + I T G ALSD ++G+ I VK
Sbjct: 153 AKVKRNVKIGEAVQANDI---CMVCRNDKVVISAGQPGLKIITQGTALSDGTLGEQIRVK 209
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++S V G V V
Sbjct: 210 NNRSNKIISAQVSAVGEVDV 229
>gi|242278485|ref|YP_002990614.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
salexigens DSM 2638]
gi|242121379|gb|ACS79075.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
salexigens DSM 2638]
Length = 334
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 2/143 (1%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ + SLF + P IN E++ + +++
Sbjct: 193 SVDGKVIRRLAGSLFVDLWKPVPCPVRPINRKELVTPDLITWKSKNMAHLGNQVWDGKGG 252
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
+ + I S + VI+RG KV ++ N+ ++ AL DA +G I
Sbjct: 253 P--WRVKVPVGTGQPIMRSSIEPAPVIARGDKVTLMFRGKNLKLTVPVEALEDAGVGQNI 310
Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
V+N+ + V +VV+ TV+V
Sbjct: 311 TVRNLQSKRKVVATVVNAQTVQV 333
>gi|34496454|ref|NP_900669.1| flagella basal body P-ring formation protein flgA [Chromobacterium
violaceum ATCC 12472]
gi|34102307|gb|AAQ58673.1| probable flagella basal body P-ring formation protein flgA
[Chromobacterium violaceum ATCC 12472]
Length = 221
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 1/136 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ + VV + + AGE ++ ++ + ++N + GN VG V R
Sbjct: 86 SLRIPVRINEKRLGVVLNRAMMAGETISGGDVRLVDISNPALAGNVLTDASQAVGQVLRS 145
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ ++ PY++ +V++ + G AL +A+ GD I+V+ + TG
Sbjct: 146 GAPAGAWVRNFMVRAPYLVRSNQRVKVQAQGDGFSAEAEGTALGNAAQGDQISVR-LSTG 204
Query: 135 VMVSGSVVDTGTVRVV 150
+V G V G+V VV
Sbjct: 205 RVVLGVVQADGSVAVV 220
>gi|291613034|ref|YP_003523191.1| flagella basal body P-ring formation protein FlgA [Sideroxydans
lithotrophicus ES-1]
gi|291583146|gb|ADE10804.1| flagella basal body P-ring formation protein FlgA [Sideroxydans
lithotrophicus ES-1]
Length = 238
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+S++V + V +V S + VL+ S + + +G
Sbjct: 103 WSIFVQADI----KVTVDMLVASRPLAQNTVLSASDFRLQNGELGQ--PGILIDPQQAIG 156
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R + V+ +L PYV+ +G + + +S G AL++ + G + V+
Sbjct: 157 KTLRFPIGAGQVLRQDMLRAPYVVIQGKTTSVRVKDTGFYVSATGQALNNGAEGQNVQVR 216
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ +G +V G+ G+V V
Sbjct: 217 -MYSGQVVIGTAAADGSVEV 235
>gi|308186389|ref|YP_003930520.1| Flagella basal body P-ring formation protein flgA precursor
[Pantoea vagans C9-1]
gi|308056899|gb|ADO09071.1| Flagella basal body P-ring formation protein flgA precursor
[Pantoea vagans C9-1]
Length = 219
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ V G +V + ++N G ++ES + + V V R +
Sbjct: 87 IQVQVQVTGSYLVATRLLNQGSSVSESDFTLQTGRLDTLPARALLNADAVADAVVLRDIQ 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I S L +P+ + G V +I + S G AL++A+ + V+ + G +V
Sbjct: 147 PGQPINPSTLRQPWRVKAGQNVMVIASGDGFDASGEGKALNNAARSQSVRVR-MGNGQIV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V + G + + +
Sbjct: 206 SGKVREDGNILITL 219
>gi|294084427|ref|YP_003551185.1| SAF domain-containing protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664000|gb|ADE39101.1| SAF domain protein [Candidatus Puniceispirillum marinum IMCC1322]
Length = 295
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
V + + G+++ + + V+ + G DVVG + + +
Sbjct: 167 TARVVSLTRSMTRGDIITPEDVAFIDVSMREVVG-VFFDHDDVVGRRLKTSISARKPVFA 225
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
LH +++ + +V ++ G + +S G AL + G+ I VKN ++ +V G ++++
Sbjct: 226 RQLHPYWMVEKDQEVTLVNRAGAVAVSMLGYALENGQFGEWIKVKNANSDKIVHGQIINS 285
Query: 145 GTV 147
+
Sbjct: 286 KKI 288
>gi|322832560|ref|YP_004212587.1| flagella basal body P-ring formation protein FlgA [Rahnella sp.
Y9602]
gi|321167761|gb|ADW73460.1| flagella basal body P-ring formation protein FlgA [Rahnella sp.
Y9602]
Length = 260
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
S V G V + + AG L ++ +++ + + V +T R
Sbjct: 126 SYVQTKVQVSGTYWVAAKNVPAGAHLTQTDMQQKTGRLDLLPPKTILDSQQAVNGITLRN 185
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
+ + LS+L RP+++ G +V++ T +S+AG A+++A+ + + ++ + +G
Sbjct: 186 ISIGQPLTLSMLRRPWMVHAGQEVQVQATGSGFNVSSAGKAMNNAAANESVRIR-MPSGA 244
Query: 136 MVSGSVVDTGTVRV 149
+V+G+V G+V V
Sbjct: 245 IVNGTVGSDGSVTV 258
>gi|197285514|ref|YP_002151386.1| flagella basal body P-ring formation protein [Proteus mirabilis
HI4320]
gi|194683001|emb|CAR43457.1| flagella basal body P-ring formation protein [Proteus mirabilis
HI4320]
Length = 218
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ SV G +V IN +V+ S +K ++ + + + + R +
Sbjct: 85 FIQVDVSVYGQYLVAKKEINRDDVITTSSIKIIKGDLEKLPYDVLRDAVFIKNAIAMRHI 144
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ I +++ RP+ I G V + + I G A+++A + I ++ + +G +
Sbjct: 145 ATEKPITSTMVRRPWAILAGQTVTVFAQGDHFQIRYEGKAINNAVANESIRIR-VKSGQI 203
Query: 137 VSGSVVDTGTVRV 149
++G ++ G+VR+
Sbjct: 204 ITGEALENGSVRI 216
>gi|114562336|ref|YP_749849.1| flagellar basal body P-ring biosynthesis protein FlgA [Shewanella
frigidimarina NCIMB 400]
gi|114333629|gb|ABI71011.1| flagellar basal-body P-ring formation protein FlgA, putative
[Shewanella frigidimarina NCIMB 400]
Length = 235
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 7/138 (5%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ F + +Y+ + VV + +++ +++ E L+ M V +++G +
Sbjct: 93 NSPDFDYPWQMYLSVRV----EIQYPVVVANQLLSPDQIIGEHHLQVMYVDQYSLKGQFF 148
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
I ++G +R + D + + L + +G V I N+ I T G AL D +
Sbjct: 149 SDITTLIGSRVKRRVAKDSPVLSNNL---CFVCKGDTVSIYAKTTNVEIKTLGEALRDGN 205
Query: 122 IGDVIAVKNIDTGVMVSG 139
I +VI VKN +T
Sbjct: 206 IDEVIRVKNSNTSKQFDA 223
>gi|149191168|ref|ZP_01869426.1| flagellar basal body P-ring biosynthesis protein [Vibrio shilonii
AK1]
gi|148835006|gb|EDL51985.1| flagellar basal body P-ring biosynthesis protein [Vibrio shilonii
AK1]
Length = 235
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 6/145 (4%)
Query: 10 FSLYVLSL-----DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
++L + + AS+ AV + G+ L+ S + +
Sbjct: 91 WTLRCEAKKWSISATSSASLTIWAVTADKALRKGQRLSPSDIAIKPIKLYT-DKKVFFKP 149
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
+VVG +R + ++ S L+ Y + +G V ++ + + T G AL +GD
Sbjct: 150 SEVVGSKLKRSVKKGELLTTSRLYLDYDVEKGQAVDVVYQSETIRLETLGTALESGLVGD 209
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
++V+N +G ++ G V VRV
Sbjct: 210 TVSVQNQQSGKLLRGVVTKKNQVRV 234
>gi|188582485|ref|YP_001925930.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
populi BJ001]
gi|179345983|gb|ACB81395.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
populi BJ001]
Length = 348
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 56/146 (38%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
++ A V + +N GE + + L + + + +
Sbjct: 189 LIVLGERQASLRVGGVAVETREVAVLTRSLNRGEAVASADLTLERRPRDAVPADVQGAPS 248
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
VVG V +R L V+ + P +++RG V I+ +++S G+A +G
Sbjct: 249 LVVGQVAQRPLSAGSVLRSGDVAPPDLVARGDSVAIVFETPGVSLSMRGVANESGRLGAS 308
Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
++V N + ++ V+ G V V
Sbjct: 309 VSVTNGASKKVLQAVVIGPGRVSVSP 334
>gi|170747257|ref|YP_001753517.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
radiotolerans JCM 2831]
gi|170653779|gb|ACB22834.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
radiotolerans JCM 2831]
Length = 379
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 61/136 (44%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
S + V + +N GE + E + Q ++ + S+ ++G V +
Sbjct: 223 ASLRVSGVVMELREVAVLTRNLNRGEPVKEGDVALEQRPRDSVAPDAQGSVTTILGEVAQ 282
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
L+ V+ ++ P +++RG V I+ ++++S G++ +G V+ V N+ +
Sbjct: 283 NTLMAGTVLRVTDTAPPELVARGETVTIVYETPSISLSMRGLSNDSGRMGAVVNVINVAS 342
Query: 134 GVMVSGSVVDTGTVRV 149
++ +V+ G V V
Sbjct: 343 KKILQATVIGPGRVSV 358
>gi|152990360|ref|YP_001356082.1| flagellar protein FlgA [Nitratiruptor sp. SB155-2]
gi|151422221|dbj|BAF69725.1| flagellar protein FlgA [Nitratiruptor sp. SB155-2]
Length = 238
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ + + VV I G ++ + L ++ G +++++G V R +
Sbjct: 107 RAYVIIKTLANVVVAVHDIPRGSLIQKKDLAVQKMVT---HGKNYPDLQEIIGSVARVNI 163
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ I ++ Y + + VRII +G + I G+AL + GD+I VKNI T +
Sbjct: 164 YKNRKITRYMIEPNYAVKKRQNVRIIYAKGPIRIELLGLALQNGKRGDIIKVKNISTNKV 223
Query: 137 VSGSVVDTGTVR 148
+ V+ G V+
Sbjct: 224 LECKVLSDGVVQ 235
>gi|157146230|ref|YP_001453549.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter
koseri ATCC BAA-895]
gi|157083435|gb|ABV13113.1| hypothetical protein CKO_01987 [Citrobacter koseri ATCC BAA-895]
Length = 219
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV + + G L + + + + I + V+ R L+
Sbjct: 87 LQVNVQATGNYVVAAAPVARGGALGPANITLKRGRLDQLPPRTVLDINQIQDAVSLRDLV 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I LS+L + + I G +V ++ +++ G AL++A++ V+ + +G +V
Sbjct: 147 PGQPIQLSMLRQAWRIKAGQRVLVVANGDGFSVNAEGQALNNAAVAQNARVRML-SGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 206 SGTVDPDGNILINL 219
>gi|323181543|gb|EFZ66963.1| lateral flagellar P-ring addition protein [Escherichia coli 1357]
Length = 245
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 57/134 (42%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ V+ V+ ++ L + ++ S R + + D +G ++ L
Sbjct: 110 VAVRPDVLVPVVMTKSLVARDMPLTANDVELKPYNVSAQRRDVLMVLDDAIGFSSKHALQ 169
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I L P ++ R V I+ +T S G+AL + G+++ V+N + ++
Sbjct: 170 PGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVI 229
Query: 138 SGSVVDTGTVRVVV 151
S V ++G V V
Sbjct: 230 SAMVAESGVVTTVS 243
>gi|91976160|ref|YP_568819.1| flagellar basal body P-ring biosynthesis protein FlgA
[Rhodopseudomonas palustris BisB5]
gi|91682616|gb|ABE38918.1| Flageller protein FlgA [Rhodopseudomonas palustris BisB5]
Length = 366
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
++ V + A VV + + EV+ S + + + + + V+
Sbjct: 188 AGNVPVRLRVTGTAVETLATVVLTRPVERNEVIKISDVAIERRPKAEVASDAIAR-DAVI 246
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G+ RR L ++ + L +P +++R V +I + +++ G AL + GDV+ V
Sbjct: 247 GMQARRALRSGQIVRSTDLAKPDLVTRDQGVTLIYQAAGIYLTSRGKALETGTEGDVVNV 306
Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
N+ + VS +VV G V V
Sbjct: 307 LNLQSKRTVSATVVGRGQVMV 327
>gi|163856431|ref|YP_001630729.1| flagellar basal body P-ring biosynthesis protein FlgA [Bordetella
petrii DSM 12804]
gi|163260159|emb|CAP42461.1| flagella basal body P-ring formation protein FlgA [Bordetella
petrii]
Length = 241
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
++ YV + S+ G V + +I AG+ + + L + +V
Sbjct: 104 SWTQYVQATVSVR----GQYYVAAHMIPAGQTIQANDLDARDGDLVALPHGVVVDPAAIV 159
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G+ R + I + L ++RG +VRI IS+ G AL DA G + V
Sbjct: 160 GMRARYRIAAGQAIKGTALRSARAVTRGQQVRITARGAGFVISSEGEALDDAPPGAPVQV 219
Query: 129 KNIDTGVMVSGSVVDTGTVRVVV 151
+ +G +VSG V + V VV+
Sbjct: 220 RTP-SGQVVSGIVRNATLVEVVL 241
>gi|254464729|ref|ZP_05078140.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales
bacterium Y4I]
gi|206685637|gb|EDZ46119.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales
bacterium Y4I]
Length = 140
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
++P I A E++N L DV G+ R L +
Sbjct: 17 PAWADYLIPLRTIRAKEIVNPEDLALKNGEIL----GALSDPADVTGMEARVSLYAGRPL 72
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
+ P +I R V +I QG +TI+ G AL + G+ + V N+ + V+G +
Sbjct: 73 RPGDIGPPAIIERNDLVTLIFRQGVLTIAAEGRALGRGAAGEAVRVMNLSSRTTVTGRIK 132
Query: 143 DTGTVRV 149
+ G+V V
Sbjct: 133 EDGSVEV 139
>gi|262273533|ref|ZP_06051347.1| flagellar basal-body P-ring formation protein FlgA [Grimontia
hollisae CIP 101886]
gi|262222511|gb|EEY73822.1| flagellar basal-body P-ring formation protein FlgA [Grimontia
hollisae CIP 101886]
Length = 224
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 59/138 (42%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
Y A+V+ VV + G+ + + + V + +R + + ++G
Sbjct: 86 YWKIRVKAEAAVMVDVVVAKSPLKRGQAIQLTDVATKAVNIAYVRHGFFTDTEPLIGKQV 145
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
RR + P ++ ++ RP + R +V I + M GIAL + S GD+I VKN
Sbjct: 146 RRNISPGRILTPKLIDRPVWVKRDQEVIIEARRDTMIARMKGIALENGSEGDIIRVKNST 205
Query: 133 TGVMVSGSVVDTGTVRVV 150
+ + V GTV +
Sbjct: 206 SEKEIRARVSSPGTVSTI 223
>gi|240139800|ref|YP_002964277.1| Flageller protein FlgA [Methylobacterium extorquens AM1]
gi|240009774|gb|ACS41000.1| Flageller protein FlgA [Methylobacterium extorquens AM1]
Length = 348
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
++ + A V + +N GE + + L + + + +
Sbjct: 189 LVVLGERQASLRVAGVAVETREVAVLTRSLNRGEAVAGADLTVERRPRDGVPNDVQGAPT 248
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
VVG V +R L V+ + P +++RG V I+ +++S GIA +G
Sbjct: 249 LVVGQVAQRPLSAGAVLRSGDVAPPDLVARGDSVAIVFETPGVSLSLRGIANESGRLGAS 308
Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149
++V N + ++ V+ G V V
Sbjct: 309 VSVTNAASKKVLQAVVIAPGRVSV 332
>gi|171059416|ref|YP_001791765.1| flagella basal body P-ring formation protein FlgA [Leptothrix
cholodnii SP-6]
gi|170776861|gb|ACB35000.1| flagella basal body P-ring formation protein FlgA [Leptothrix
cholodnii SP-6]
Length = 255
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 5/151 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C + +++Y+ V G AVV + + A VL + L+ +V +
Sbjct: 110 LRCTEGPVAWNVYLPVTV----RVWGQAVVTAGSLPADTVLGAADLRLGEVDLAEQASPA 165
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
S+ +++G R L P + L + G VR+I +S+ A+S
Sbjct: 166 YTSMAELIGRRVARALPPGATLRADSLRARQWFAAGDTVRVITQGTGFAVSSEAQAMSPG 225
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G ++ ++G ++S V V +
Sbjct: 226 LEGQPARLR-TESGRILSAWPVGERRAEVRM 255
>gi|144897833|emb|CAM74697.1| Distal basal body ring component protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 317
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 60/139 (43%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
V + + V + +N G+++ E+ +K +++ R + + ++G
Sbjct: 171 AVRQRVNGRFFPVAKVPVLARPLNRGDIITEADIKWVELRADVARRDIIIDVDQIIGQEP 230
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
R+ + D + S L RP ++ R A V + L NM++++ A GDVI + N+
Sbjct: 231 RQPVRADAPLRASELRRPVLVERNAMVTVTLKTANMSLTSQAKATEAGGKGDVIRITNLQ 290
Query: 133 TGVMVSGSVVDTGTVRVVV 151
+ V V G V V
Sbjct: 291 SKRTVEAVVEGPGLVSVTP 309
>gi|15644289|ref|NP_229341.1| flagellar protein FlgA, putative [Thermotoga maritima MSB8]
gi|4982108|gb|AAD36608.1|AE001800_18 flagellar protein FlgA, putative [Thermotoga maritima MSB8]
Length = 286
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 9 FFSLYVL-----SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
FS+++ ++ + VV IN G+V+ E ++ + I G
Sbjct: 136 LFSVFLRFPDTYVTLNMLLRKERNVVVLKRNINVGDVIKEEDVRLEKRNVFEIYGEPFFD 195
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ +VVG ++RR L V+ ++ P + +G V + G++ ++T L + +G
Sbjct: 196 VSEVVGKISRRYLKEGTVLTADMVKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLG 255
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
+ + N+++ V G V +R++
Sbjct: 256 ETVRAMNVESRKYVFGRVERGPVLRIL 282
>gi|1857440|gb|AAC45658.1| FlgA [Proteus mirabilis]
Length = 218
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ ++ G +V IN +V+ S +K ++ + + + + R +
Sbjct: 85 FIQVDVNLYGQYLVAKKEINRDDVITTSSIKIIKGDLEKLPYDVLRDAVFIKNAIAMRHI 144
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
I +++ RP+ I G V + + I G A+++A + I ++ + +G +
Sbjct: 145 ATGKPITSTMVRRPWAILAGQTVTVFAQGDHFQIRYEGKAINNAVANESIRIR-VKSGQI 203
Query: 137 VSGSVVDTGTVRV 149
++G ++ G+VR+
Sbjct: 204 ITGEALENGSVRI 216
>gi|238796900|ref|ZP_04640404.1| Flagellar basal body P-ring biosynthesis protein [Yersinia
mollaretii ATCC 43969]
gi|238719160|gb|EEQ10972.1| Flagellar basal body P-ring biosynthesis protein [Yersinia
mollaretii ATCC 43969]
Length = 230
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 1/136 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ G I G + + + + + + +VG R +
Sbjct: 95 FIQISVQAQGTWWAARKTIKPGSEIQAENIVSRTGSLDRLPAGLVFNKESIVGQTAARTI 154
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
I + L R + I G +V I +T I G AL +A++G + + + +G +
Sbjct: 155 TRGQPIVQTQLRRRWAIVSGQEVEITVTGPGFRIRAKGKALDNAAVGKPVRI-AMRSGQI 213
Query: 137 VSGSVVDTGTVRVVVK 152
+ G G V + +K
Sbjct: 214 MPGVASSEGKVDINLK 229
>gi|222447129|pdb|3FRN|A Chain A, Crystal Structure Of Flagellar Protein Flga From
Thermotoga Maritima Msb8
Length = 278
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 9 FFSLYVL-----SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
FS+++ ++ + VV IN G+V+ E ++ + I G
Sbjct: 121 LFSVFLRFPDTYVTLNMLLRKERNVVVLKRNINVGDVIKEEDVRLEKRNVFEIYGEPFFD 180
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ +VVG ++RR L V+ ++ P + +G V + G++ ++T L + +G
Sbjct: 181 VSEVVGKISRRYLKEGTVLTADMVKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLG 240
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
+ + N+++ V G V +R++
Sbjct: 241 ETVRAMNVESRKYVFGRVERGPVLRIL 267
>gi|114777906|ref|ZP_01452820.1| flagellar protein [Mariprofundus ferrooxydans PV-1]
gi|114551693|gb|EAU54245.1| flagellar protein [Mariprofundus ferrooxydans PV-1]
Length = 234
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 61/134 (45%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + A+V I+A +L + + + G + + +VG+ T R L
Sbjct: 96 VPVQVRWMATAIVMRQNISARSLLTRDMMTNRRTDIAGHHGAWWQNSSTLVGMRTTRPLA 155
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
VI S + +P ++ RG V I+L G + I G A+ A G+ I V+N+ + M+
Sbjct: 156 AGDVILSSYVKQPPLVKRGDLVSILLDVGGLHIRAEGKAMRSAGKGESIPVRNMRSHEMI 215
Query: 138 SGSVVDTGTVRVVV 151
V TG VRV +
Sbjct: 216 QAVVEQTGLVRVSL 229
>gi|254500840|ref|ZP_05112991.1| flagella basal body P-ring formation protein FlgA [Labrenzia
alexandrii DFL-11]
gi|222436911|gb|EEE43590.1| flagella basal body P-ring formation protein FlgA [Labrenzia
alexandrii DFL-11]
Length = 152
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-HSIK 65
L+ F L +L+ + V I AG + L E + +
Sbjct: 7 LVAFCLAMLTAAPSAFAASIELPVARQTIPAGSEIGHRDLVERKFPSRTATQFAVASHRS 66
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
+VG VTRR LLP IP++ + +P ++ RG R++ + + I AL + G
Sbjct: 67 QLVGQVTRRTLLPGQPIPINSVEQPLLVKRGEPARLVFQEQGLVIVMQVEALQNGGAGSF 126
Query: 126 IAVKNIDTGVMVSGSVVDTGTVRV 149
+ V+N+D+G++VSG V GT+RV
Sbjct: 127 VRVRNVDSGLVVSGRVQQDGTIRV 150
>gi|148270381|ref|YP_001244841.1| SAF domain-containing protein [Thermotoga petrophila RKU-1]
gi|147735925|gb|ABQ47265.1| SAF domain [Thermotoga petrophila RKU-1]
Length = 280
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 9 FFSLYVL-----SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
FS+++ ++ + VV IN G+V+ E ++ + I G
Sbjct: 130 LFSVFLRFPETYVTLNMLLRKERNVVVLKRNINVGDVIKEEDVRLEKKNVFEIYGEPFFD 189
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ +VVG ++RR L V+ ++ P + +G V + G++ ++T L + +G
Sbjct: 190 VSEVVGKISRRYLKEGTVLTADMVKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLG 249
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
+ + N+++ V G V +R++
Sbjct: 250 ETVRAMNVESRKYVFGRVERGPVLRIL 276
>gi|56695099|ref|YP_165446.1| flagellar basal body P-ring biosynthesis protein FlgA [Ruegeria
pomeroyi DSS-3]
gi|56676836|gb|AAV93502.1| flagellar basal-body P-ring formation protein FlgA [Ruegeria
pomeroyi DSS-3]
Length = 138
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 4/132 (3%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
L + +VP+ I A E++ L +V+G R L
Sbjct: 10 LVLAQTAAAEVLVPTRTIRAKEIIGAEDLMLKSAEV----PGSFTDPAEVIGQEARVALY 65
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
I + + P ++ R V + G + I+T G AL + GDVI V N+ + V
Sbjct: 66 AGRPIRYADIGPPAIVDRNDLVTLFFDNGPLVITTEGRALGRGAAGDVIRVMNLTSRTTV 125
Query: 138 SGSVVDTGTVRV 149
SG + G++ V
Sbjct: 126 SGQIRPNGSIEV 137
>gi|148980287|ref|ZP_01815974.1| Flageller protein FlgA [Vibrionales bacterium SWAT-3]
gi|145961306|gb|EDK26616.1| Flageller protein FlgA [Vibrionales bacterium SWAT-3]
Length = 235
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 55/135 (40%), Gaps = 3/135 (2%)
Query: 17 LDSLFASVIGHAVVPS--VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
S ++ + + G+ L + + ++ G +R
Sbjct: 101 TLSATSTSTITVWTATANKTLKKGQRLTHDDIAIEPIKLYK-DQKVFFKANEIAGSKIKR 159
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ ++ S ++ Y + +G V ++ ++ + T G+AL IGD ++VKN +G
Sbjct: 160 SVNKGDLLTTSSMYLDYAVEKGHAVDVVFQSKSIRLETLGMALESGLIGDTVSVKNQQSG 219
Query: 135 VMVSGSVVDTGTVRV 149
++ G V++ VR+
Sbjct: 220 KLLRGVVIEKNRVRI 234
>gi|90423016|ref|YP_531386.1| flagellar basal body P-ring biosynthesis protein FlgA
[Rhodopseudomonas palustris BisB18]
gi|90105030|gb|ABD87067.1| Flageller protein FlgA [Rhodopseudomonas palustris BisB18]
Length = 370
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
Query: 2 DCVRFLLFFSLY-------VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS 54
RF + F + + A A V + + EVL S + + +
Sbjct: 185 RSGRFDVTFEIAGDGSAAPTKLRFTGTAIETVDAAVLARGVERNEVLKSSDVVVERRPKA 244
Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
I G+ A D VG+ RR L + L L +P ++SR V +I + ++ G
Sbjct: 245 EIGGDAASR-DDAVGMQARRQLRAGQALRLVDLSKPDLVSRDQAVTLIYQSTGLYLTVRG 303
Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
AL + GDV+ V N+ + V+G+V+ G V V
Sbjct: 304 KALESGTEGDVVNVINLQSKRTVAGTVIGRGQVAV 338
>gi|86750897|ref|YP_487393.1| flagellar basal body P-ring biosynthesis protein FlgA
[Rhodopseudomonas palustris HaA2]
gi|86573925|gb|ABD08482.1| Flageller protein FlgA [Rhodopseudomonas palustris HaA2]
Length = 358
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 7/154 (4%)
Query: 2 DCVRFLLFFSLY------VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN 55
RF + F + V + A A V + I EV+ S + + +
Sbjct: 174 RSGRFDINFEIAGSDNAPVRLRLTGTAVETVPATVLTRSIERNEVIKASDVAIERRPKAE 233
Query: 56 IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115
+ + +G+ RR L ++ + L +P +++R V +I + +++ G
Sbjct: 234 AASDIVVR-EVAIGMQARRTLRSGQLVRSADLAKPDLVTRDQGVTLIYQAAGIYLTSRGK 292
Query: 116 ALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
AL + GDVI V N+ + V+ +V+ G V V
Sbjct: 293 ALETGTEGDVINVLNLHSKRTVAATVIGRGQVMV 326
>gi|85859197|ref|YP_461399.1| flagellar basal body P-ring biosynthesis protein [Syntrophus
aciditrophicus SB]
gi|85722288|gb|ABC77231.1| flagellar basal body P-ring biosynthesis protein [Syntrophus
aciditrophicus SB]
Length = 244
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 56/132 (42%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
V + + + ++E + ++ S + + + ++G R +
Sbjct: 111 VPTRIEVCRDVALSARPLERNRNISEHDILIVKKWFSRLPQDLLADPERIIGKRLLRSIK 170
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
S+L P + +G V++I G ++I+T G+A + ++G + +KNI + ++
Sbjct: 171 ERSTFTASMLREPILFKKGKVVKVICDNGVLSITTLGLAEEEGTLGATVKIKNISSNKII 230
Query: 138 SGSVVDTGTVRV 149
V+ V+V
Sbjct: 231 HAKVIGNSVVKV 242
>gi|300817274|ref|ZP_07097492.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 107-1]
gi|300530250|gb|EFK51312.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 107-1]
Length = 245
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 58/134 (43%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ V+ V+ ++ L + ++ S R + + D +GL ++ L
Sbjct: 110 VAVRPDVLVPVVMTKSLVARDMPLTANDVELKPYNVSAQRRDVLMELDDAIGLSSKHALQ 169
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I L P ++ R V I+ +T S G+AL + G+++ V+N + ++
Sbjct: 170 PGRPITKEELVSPVLVGRDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQWVI 229
Query: 138 SGSVVDTGTVRVVV 151
S V ++G V V
Sbjct: 230 SAMVAESGVVTTVS 243
>gi|170288993|ref|YP_001739231.1| flagella basal body P-ring formation protein FlgA [Thermotoga sp.
RQ2]
gi|170176496|gb|ACB09548.1| flagella basal body P-ring formation protein FlgA [Thermotoga sp.
RQ2]
Length = 286
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 9 FFSLYVL-----SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
FS+++ ++ + VV IN G+V+ E ++ + I G
Sbjct: 136 LFSVFLRFPETYVTLNMLLRKERNVVVLKRNINVGDVIKEEDVRLEKKNVFEIYGEPFFD 195
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ +VVG ++RR L V+ ++ P + +G V + G++ ++T L + +G
Sbjct: 196 VSEVVGKISRRYLKEGTVLTADMVKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLG 255
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
+ + N+++ V G V +R++
Sbjct: 256 ETVRAMNVESRKYVFGRVERGPVLRIL 282
>gi|281412687|ref|YP_003346766.1| flagella basal body P-ring formation protein FlgA [Thermotoga
naphthophila RKU-10]
gi|281373790|gb|ADA67352.1| flagella basal body P-ring formation protein FlgA [Thermotoga
naphthophila RKU-10]
Length = 286
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 9 FFSLYVL-----SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
FS+++ ++ + VV IN G+V+ E ++ + I G
Sbjct: 136 LFSVFLRFPETYVTLNMLLRKERNVVVLKRNINVGDVIKEEDVRLEKKNVFEIYGEPFFD 195
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ +VVG ++RR L V+ ++ P + +G V + G++ ++T L + +G
Sbjct: 196 VSEVVGKISRRYLKEGTVLTADMVKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLG 255
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVV 150
+ + N+++ V G V +R++
Sbjct: 256 ETVRAMNVESRKYVFGRVERGPVLRIL 282
>gi|304397200|ref|ZP_07379079.1| flagella basal body P-ring formation protein FlgA [Pantoea sp. aB]
gi|304355349|gb|EFM19717.1| flagella basal body P-ring formation protein FlgA [Pantoea sp. aB]
Length = 219
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ V G +V + +++ G ++ES + + V V R +
Sbjct: 87 IQVQVQVTGSYLVANRLLSQGSSVSESDFTLQTGRLDTLPARALLNADSVADAVVLRDIQ 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I S L +P+ + G V +I + S G AL++A+ + V+ + G +V
Sbjct: 147 PGQPINPSTLRQPWRVKAGQNVMVIASGDGFDASGEGKALNNAARSQSVRVR-MGNGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V + G + + +
Sbjct: 206 SGKVREDGNILITL 219
>gi|300311348|ref|YP_003775440.1| flagellar basal body P-ring formation protein [Herbaspirillum
seropedicae SmR1]
gi|300074133|gb|ADJ63532.1| flagellar basal body P-ring formation protein [Herbaspirillum
seropedicae SmR1]
Length = 254
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 59/140 (42%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++YV + VI ++ +V + G+ ++ S + ++ S + V+G
Sbjct: 118 WTIYVRANV----QVISDYLIAAVPLAQGQTISASDISRVRGDMSALPAGVITEESQVIG 173
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
V L + + + V+ +G VR++ IST ALS+A+ G + +
Sbjct: 174 RVAGMSLRAGTPLRMDAIRNQRVVQQGQSVRVVSNGPGFQISTEARALSNANEGQMTQAR 233
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
G +VSG G + +
Sbjct: 234 -TAAGQVVSGIAKAGGILEI 252
>gi|332140540|ref|YP_004426278.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas
macleodii str. 'Deep ecotype']
gi|327550562|gb|AEA97280.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas
macleodii str. 'Deep ecotype']
Length = 238
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 3/131 (2%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
S + VV ++ G VL S L +V +R ++ ++G +R +
Sbjct: 109 SGQVTRTKEIVVTQGAVSPGTVLTSSNLTLAKVDVRRLRHTAFTDLEALIGARMKRRVTN 168
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
I ++L + +G ++ I M + TAGIA D +GD I V N + V
Sbjct: 169 GQAIQSNML---CFVCKGDRITITAEVAGMEVKTAGIAQQDGVVGDNIKVLNASSRKAVI 225
Query: 139 GSVVDTGTVRV 149
V V +
Sbjct: 226 ARVASPEEVVI 236
>gi|292669969|ref|ZP_06603395.1| flagellar basal body P-ring biosynthesis protein FlgA [Selenomonas
noxia ATCC 43541]
gi|292648381|gb|EFF66353.1| flagellar basal body P-ring biosynthesis protein FlgA [Selenomonas
noxia ATCC 43541]
Length = 255
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 6/151 (3%)
Query: 6 FLLFFSLYV------LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
F F++YV + +V +V I A ++ + + + +
Sbjct: 104 FPAVFAVYVDGVLHQRATSYYRLTVYDRVLVAMTDIRAETEISPANARVEERAVDTVPEL 163
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
+ G V R + D VI +L P V+ G V ++ + + G+A+
Sbjct: 164 TLTDFTRLEGRVAGRYIRRDTVITPPMLAMPLVVRAGNAVELVHNANGILVRAEGVAIES 223
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
IG I V+N +G ++ G ++D TV+++
Sbjct: 224 GRIGYTIRVRNARSGKIMRGRIIDAQTVQII 254
>gi|110677664|ref|YP_680671.1| flagellar basal body P-ring biosynthesis protein FlgA [Roseobacter
denitrificans OCh 114]
gi|109453780|gb|ABG29985.1| flagella basal body P-ring formation protein FlgA, putative
[Roseobacter denitrificans OCh 114]
Length = 140
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
VVP+ I A + S + + N N + DVVG R L I
Sbjct: 19 AEVVVPAKTIRANATITASDITLKPIQN----ENAYTLMADVVGQEARTTLYAGRPILFD 74
Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
+ P ++SR V + + I T G AL +GD + + N+D+ + G V G
Sbjct: 75 DIGPPAIVSRNQIVLLSYQSSGLKILTEGRALQRGGVGDRVRIMNLDSRATLFGQVQADG 134
Query: 146 TVRV 149
+VRV
Sbjct: 135 SVRV 138
>gi|226327750|ref|ZP_03803268.1| hypothetical protein PROPEN_01623 [Proteus penneri ATCC 35198]
gi|225203454|gb|EEG85808.1| hypothetical protein PROPEN_01623 [Proteus penneri ATCC 35198]
Length = 218
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 54/133 (40%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ SV G +V IN + + + + + + + + R +
Sbjct: 85 FIQVDVSVTGKYLVAKKDINRDDAIETASVSMITGELEKQPYDVLRDPTLIKNAIAMRQI 144
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
I +++ RP+ I G V + + I G A+++A + I V+ + +G +
Sbjct: 145 SAGKPITSTMIRRPWAILAGQTVTVFAQGDHFQIRYEGKAINNAVANETIRVR-VKSGQI 203
Query: 137 VSGSVVDTGTVRV 149
V G ++ G+VR+
Sbjct: 204 VIGEALENGSVRI 216
>gi|27380940|ref|NP_772469.1| flagellar basal body P-ring biosynthesis protein FlgA
[Bradyrhizobium japonicum USDA 110]
gi|27354106|dbj|BAC51094.1| blr5829 [Bradyrhizobium japonicum USDA 110]
Length = 382
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ A V + I+ ++L S + + + + G A +G+ RR +
Sbjct: 185 RFTGTAIETVEVAVLTRDIDRADLLKSSDVALERRPKAEVTGEAASR-DRTIGMQLRRPM 243
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
I ++ + +P + R V II + ++T G A+ + GD ++V N+ +
Sbjct: 244 RAGTPIRVADIVKPDFVQRDQNVTIIYQVPGLYLTTRGKAIESGAEGDTVSVLNLQSKRT 303
Query: 137 VSGSVVDTGTVRV 149
++G V G + V
Sbjct: 304 LTGVVTGRGQITV 316
>gi|312968855|ref|ZP_07783062.1| flagella basal body P-ring formation protein flgA [Escherichia coli
2362-75]
gi|312286257|gb|EFR14170.1| flagella basal body P-ring formation protein flgA [Escherichia coli
2362-75]
Length = 192
Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 60 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 119
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
PD I L+ + + + G +V +I + + + G AL++A++ V+ I +G +V
Sbjct: 120 PDQPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMI-SGQVV 178
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 179 SGVVDADGNILINL 192
>gi|255603613|ref|XP_002538081.1| Flagella basal body P-ring formation protein flgA precursor,
putative [Ricinus communis]
gi|223513891|gb|EEF24302.1| Flagella basal body P-ring formation protein flgA precursor,
putative [Ricinus communis]
Length = 288
Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++LYV + V G V + ++ G + + + S + + + G
Sbjct: 152 WTLYVQADV----QVWGEYAVTGLPVSQGSPVQTTDVVMQSGDLSKLPAGIITDLSMLEG 207
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
L V+ +L VI +G V++ IS G A+ A++G V+ VK
Sbjct: 208 KQAALNLPLGTVLRPELLKSVPVIKQGQTVQLNSRGDGFVISADGTAMQTANVGQVVDVK 267
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
+ +G +V G +G V V
Sbjct: 268 -VSSGQIVKGVAQSSGKVDVR 287
>gi|163733144|ref|ZP_02140588.1| flagella basal body P-ring formation protein FlgA, putative
[Roseobacter litoralis Och 149]
gi|161393679|gb|EDQ18004.1| flagella basal body P-ring formation protein FlgA, putative
[Roseobacter litoralis Och 149]
Length = 140
Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 58/146 (39%), Gaps = 9/146 (6%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+RF L L V VVP+ I A ++ S + + N N
Sbjct: 2 IRFALISWLVCSPFF-----VFAEVVVPAKTIRANATISASDITLKPIKN----ENAYSL 52
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ DVVG R L I + P ++SR V + + I T G AL +G
Sbjct: 53 MADVVGQEARTTLYAGRPILFDDVGPPAIVSRNQIVLLSYQSSGLKILTEGRALQRGGVG 112
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
D + + N+D+ + G V G++RV
Sbjct: 113 DRVRIMNLDSRATLFGQVQADGSIRV 138
>gi|237731003|ref|ZP_04561484.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter
sp. 30_2]
gi|226906542|gb|EEH92460.1| flagellar basal body P-ring biosynthesis protein FlgA [Citrobacter
sp. 30_2]
Length = 219
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV + + G L + + + + + V V+ R L+
Sbjct: 87 LQVNVQATGNYVVAAASVARGSTLTPASVTLKRGRLDQLPPRAVLDMSQVQDAVSLRDLV 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I LS+L + + I G +V +I ++ G AL++A++ V+ I +G +V
Sbjct: 147 PGQPIQLSMLRQAWRIKAGQRVLVIANGDGFRVNAEGKALNNAAVAQNARVRMI-SGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 206 SGVVDSDGNILINL 219
>gi|85058007|ref|YP_453709.1| flagellar basal body P-ring formation protein FlgA [Sodalis
glossinidius str. 'morsitans']
gi|84778527|dbj|BAE73304.1| flagellar basal body P-ring formation protein FlgA [Sodalis
glossinidius str. 'morsitans']
Length = 238
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ S G V + + +G L + + N + + V G +T
Sbjct: 90 ARRYFLQIKVSARGDYWVAARGLPSGTALGSKNVARENGELAGQPRNVIFATQPVTGSLT 149
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
R + + ++L P+ + +G V ++ + G A+SDA++GD + V+ +
Sbjct: 150 TRAIQAGQPLTANMLRAPWKVRQGNPVAVVSRGPGFQVRHYGKAMSDAAVGDALRVR-LA 208
Query: 133 TGVMVSGSVVDTGTV 147
+G MVSG+V + G V
Sbjct: 209 SGQMVSGAVDNQGVV 223
>gi|331646330|ref|ZP_08347433.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
M605]
gi|281178181|dbj|BAI54511.1| flagellar basal body P-ring protein FlgA precursor [Escherichia
coli SE15]
gi|330910886|gb|EGH39396.1| flagellar basal-body P-ring formation protein FlgA [Escherichia
coli AA86]
gi|331045082|gb|EGI17209.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
M605]
Length = 219
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
PD I L+ + + + G +V +I + + + G AL++A++ V+ I +G +V
Sbjct: 147 PDQPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMI-SGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 206 SGVVDADGNILINL 219
>gi|149189832|ref|ZP_01868112.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii
AK1]
gi|148836318|gb|EDL53275.1| flagellar basal body P-ring biosynthesis protein A [Vibrio shilonii
AK1]
Length = 240
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
S ++ V S +N + + ++ T + + + ++G R +
Sbjct: 109 SAKVTLSLPVAVASQTLNRDTQITAASVQLETRTLNRAVH-FVADLSQIIGNQVSRRMRT 167
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+I S + +P ++ +G +V II +G ST GIAL G+ I V+N + ++
Sbjct: 168 GQIIDASFVVKPPLVEKGNEVVIIAAKGKFNASTKGIALETGGAGEQIEVQNSQSKKVIR 227
Query: 139 GSVVDTGTV 147
V V
Sbjct: 228 AVVTGLNQV 236
>gi|222100098|ref|YP_002534666.1| Flagellar protein FlgA [Thermotoga neapolitana DSM 4359]
gi|221572488|gb|ACM23300.1| Flagellar protein FlgA [Thermotoga neapolitana DSM 4359]
Length = 287
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 63/135 (46%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
++ + VV IN G+V+ E + + I G +++ +VVG+V++R
Sbjct: 149 VTLNVVLKKERNVVVLKRNINVGDVIKEDFVTVEERDIFEINGEPFYNVSEVVGMVSKRY 208
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
L V+ ++L P + +G V + G++ +ST L + +G+ + N+++
Sbjct: 209 LRSGTVLTKNMLEHPPDVVKGQIVPAYVDLGSIKVSTFVEILENGHLGETVKAMNVESRK 268
Query: 136 MVSGSVVDTGTVRVV 150
V G V +R++
Sbjct: 269 YVFGRVEKGPVLRIL 283
>gi|284007177|emb|CBA72463.1| flagellar basal body P-ring biosynthesis protein FlgA [Arsenophonus
nasoniae]
Length = 224
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
L SV G+ V + I V+N+ + + + I + V+ R +
Sbjct: 90 LRLAVSVEGNYWVANQPIKRHSVINQHNVVAKRGLLEKLPRGIIRDIHAYINSVSLRDIA 149
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
I ++L R +VI G V + + + G A+++A+ + + +K + TG ++
Sbjct: 150 AGQPISQNMLRRAWVIQAGKHVTVYAQGRHFQVKYEGKAINNAAENESVRLK-MPTGQII 208
Query: 138 SGSVVDTGTVRVVVK 152
+ G ++ +K
Sbjct: 209 TAIAQKEGYAKITLK 223
>gi|317153843|ref|YP_004121891.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
aespoeensis Aspo-2]
gi|316944094|gb|ADU63145.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
aespoeensis Aspo-2]
Length = 338
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG--LVTRRVL 76
++F + V + +N E + + M++ + + D VG R L
Sbjct: 210 TVFVDIWKAVPVAAKPLNRFERVTTDNVTFMRMNLAYNP-----DLWDGVGGPWRMARTL 264
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ +S L R +I +G +V ++ + +S AL +A +G ++V+N+ + +
Sbjct: 265 GRNQPFSMSHLERVPLIEKGDRVNLVFQSQRVQLSMKAEALGEADMGQQVSVRNLQSNKV 324
Query: 137 VSGSVVDTGTVRVV 150
+ +VV TV V
Sbjct: 325 ILATVVGNNTVMVR 338
>gi|215486281|ref|YP_002328712.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O127:H6 str. E2348/69]
gi|218689025|ref|YP_002397237.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli ED1a]
gi|215264353|emb|CAS08710.1| assembly protein for flagellar basal-bodyperiplasmic P ring
[Escherichia coli O127:H6 str. E2348/69]
gi|218426589|emb|CAR07417.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli ED1a]
gi|320196446|gb|EFW71069.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia
coli WV_060327]
Length = 219
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
PD I L+ + + + G +V +I + + + G AL++A++ V+ I +G +V
Sbjct: 147 PDQPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMI-SGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 206 SGVVDADGNILINL 219
>gi|110641248|ref|YP_668978.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli 536]
gi|191172461|ref|ZP_03034002.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
F11]
gi|300982625|ref|ZP_07176209.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 200-1]
gi|306814079|ref|ZP_07448252.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli NC101]
gi|110342840|gb|ABG69077.1| flagella basal body P-ring formation protein FlgA precursor
[Escherichia coli 536]
gi|190907345|gb|EDV66943.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
F11]
gi|300307090|gb|EFJ61610.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 200-1]
gi|305852716|gb|EFM53164.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli NC101]
gi|324013346|gb|EGB82565.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 60-1]
Length = 219
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
PD I L+ + + + G +V +I + + + G AL++A++ V+ I +G +V
Sbjct: 147 PDQPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMI-SGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 206 SGVVDADGNILINL 219
>gi|315180469|gb|ADT87383.1| flagellar basal body P-ring biosynthesis protein flgA [Vibrio
furnissii NCTC 11218]
Length = 233
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ +S+ A+ + + G L + +VT S+ + + V+G RR +
Sbjct: 101 KATSVSSIDIEALTATRPLKKGHRLQGEDVAPSRVTLSS-KSAVYREREQVIGSKLRRPI 159
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
H+I + L + YV+ +G V + T+ T A ++ IGD I V++ D+G +
Sbjct: 160 RASHLITSAHLEQNYVVLQGHSVTLRYRTAGFTLETVATAENNGLIGDTIWVRSRDSGRL 219
Query: 137 VSGSVVDTGTVR 148
+S VV G V
Sbjct: 220 LSVKVVGDGEVE 231
>gi|91210224|ref|YP_540210.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli UTI89]
gi|117623258|ref|YP_852171.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli APEC O1]
gi|218557954|ref|YP_002390867.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli S88]
gi|237706942|ref|ZP_04537423.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
sp. 3_2_53FAA]
gi|91071798|gb|ABE06679.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring
[Escherichia coli UTI89]
gi|115512382|gb|ABJ00457.1| FlgA [Escherichia coli APEC O1]
gi|218364723|emb|CAR02413.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli S88]
gi|226898152|gb|EEH84411.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
sp. 3_2_53FAA]
gi|294490364|gb|ADE89120.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
IHE3034]
gi|307627458|gb|ADN71762.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli UM146]
gi|315287373|gb|EFU46784.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 110-3]
gi|323953242|gb|EGB49108.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
H252]
gi|323957896|gb|EGB53608.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
H263]
Length = 219
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
PD I L+ + + + G +V +I + + + G AL++A++ V+ I +G +V
Sbjct: 147 PDQPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMI-SGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 206 SGVVDADGNILINL 219
>gi|303328379|ref|ZP_07358817.1| FlgA family protein [Desulfovibrio sp. 3_1_syn3]
gi|302861709|gb|EFL84645.1| FlgA family protein [Desulfovibrio sp. 3_1_syn3]
Length = 417
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 61/149 (40%), Gaps = 5/149 (3%)
Query: 4 VRFLL---FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+RF + ++ ++ ++ S + G+ L + M++ S +R
Sbjct: 270 LRFAVQEADGTVLRRVSGTVNLTLWITVPAASRPLGKGDALTPEAVTFMRINASQLRDLP 329
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
R L+ I S L ++ RG + +I T+GN+ ++T AL+D
Sbjct: 330 WDGHGGP--WQVTRSLITGEPILQSDLASQLMVRRGTILSLIYTRGNLRMTTQAEALADG 387
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G I V+N+ T + +V D TV +
Sbjct: 388 EPGATIPVRNLQTKKQIYATVKDGSTVEI 416
>gi|260768766|ref|ZP_05877700.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
furnissii CIP 102972]
gi|260616796|gb|EEX41981.1| flagellar basal-body P-ring formation protein FlgA [Vibrio
furnissii CIP 102972]
Length = 233
Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ +S+ A+ + + G L + +VT S+ + + V+G RR +
Sbjct: 101 KATSVSSIDIEALTATRPLKKGHRLQGEDVAPSRVTLSS-KSAVYREREQVIGSKLRRPI 159
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
H+I + L + YV+ +G V + T+ T A S+ IGD I V++ D+G +
Sbjct: 160 RASHLITSAHLEQNYVVLQGHSVTLRYRTAGFTLETVATAESNGLIGDTIWVRSRDSGRL 219
Query: 137 VSGSVVDTGTVR 148
+S VV G V
Sbjct: 220 LSVKVVGDGEVE 231
>gi|90408053|ref|ZP_01216224.1| flagellar basal body P-ring biosynthesis protein [Psychromonas sp.
CNPT3]
gi|90310810|gb|EAS38924.1| flagellar basal body P-ring biosynthesis protein [Psychromonas sp.
CNPT3]
Length = 230
Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+S YV + + ++ + + GE LN + +K +T S +RG K ++G
Sbjct: 96 WSTYVRVR----SHRLFRTIISAQALRKGETLNNNNIKVTYLTKSQLRGGSFSQKKILIG 151
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + +I + + + +V I + + I T+GIAL++A+IG+ + VK
Sbjct: 152 SRLKRNMGAQKIIKNRDV---CFVCQKDQVIISAIKAGLVIKTSGIALNNANIGESVRVK 208
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + +V G+V V+V
Sbjct: 209 NSRSQRIVVGTVSAQKEVQV 228
>gi|124268258|ref|YP_001022262.1| flagellar basal body P-ring biosynthesis protein [Methylibium
petroleiphilum PM1]
gi|124261033|gb|ABM96027.1| flagellar basal body P-ring biosynthesis protein [Methylibium
petroleiphilum PM1]
Length = 239
Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 67/151 (44%), Gaps = 5/151 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C++ +++Y+ ++ G A+V + + AG VL + L+E ++ +
Sbjct: 94 LRCLQGEKKWNVYLPITVRVY----GRALVAASALPAGTVLTAADLREAEIDLAADPAAA 149
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
++ +G R++ + ++L + G V+++ ++ + G A++
Sbjct: 150 LTDPQEAIGRSLLRMVSAGEDLRQNLLRARQWFAAGETVQLVAVGPGFSVQSEGQAITPG 209
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G + V+ ++G +V+G V V + +
Sbjct: 210 LDGSPVRVR-TESGRIVTGLPVGERRVELRL 239
>gi|77918759|ref|YP_356574.1| flagellar basal body P-ring biosynthesis protein [Pelobacter
carbinolicus DSM 2380]
gi|77544842|gb|ABA88404.1| flagellar basal body P-ring biosynthesis protein [Pelobacter
carbinolicus DSM 2380]
Length = 240
Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 1/118 (0%)
Query: 34 VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
+ G +L L + + + +R + +VG RR + + L P +I
Sbjct: 124 DLPRGTILQAEDLSMVTMDLAGLRAPCL-DAQQMVGKKLRRPVRMGAPFTQTGLETPPLI 182
Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
RG V I + G +T++T G+A + I VKNI + + V V V +
Sbjct: 183 KRGDMVTITASVGALTVTTRGLAQESGIADETIRVKNIRSKKEIFCRVTAPSAVEVEL 240
>gi|317047687|ref|YP_004115335.1| flagella basal body P-ring formation protein FlgA [Pantoea sp.
At-9b]
gi|316949304|gb|ADU68779.1| flagella basal body P-ring formation protein FlgA [Pantoea sp.
At-9b]
Length = 219
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 55/134 (41%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ V G +V + + G + S + + S V + R +
Sbjct: 87 IQVQVQVTGLYLVANHQLMRGSNVTASDFRLQSGRLDTLPARTLFSADSVADAIAMRDIT 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + +++ P+ + G V ++ + S+ G AL++A+ ++ V+ + G +V
Sbjct: 147 PGQPVTATMVRLPWRVKAGQNVIVVASGNGFDASSEGQALNNATTAQMVRVR-MGNGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V + G + + +
Sbjct: 206 SGRVGEDGNILISL 219
>gi|254512113|ref|ZP_05124180.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae
bacterium KLH11]
gi|221535824|gb|EEE38812.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae
bacterium KLH11]
Length = 137
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+ + VVP+ I A EV++ S L+ V S + ++G R L P I
Sbjct: 14 TAMAEIVVPNRTIRAKEVISASDLEIRAVEA----QGAVRSAEALIGQEARIALYPGRPI 69
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
S + P ++ R V ++ + ++I+T G AL + G+ I V N+ + V+G +
Sbjct: 70 RPSDIGPPAIVDRNDLVMLVFDRVALSITTEGRALGRGAAGERIRVMNLSSRTTVTGVIR 129
Query: 143 DTGTVRV 149
G + V
Sbjct: 130 PDGQIEV 136
>gi|239995132|ref|ZP_04715656.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas
macleodii ATCC 27126]
Length = 238
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 3/131 (2%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
S + VV I+ G VL S L +V +R ++ ++G +R +
Sbjct: 109 SGQVTRTKEIVVTQGAISPGTVLTSSNLSLAKVDVRRLRHTAFTELEALIGARIKRRVTD 168
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
I ++L + +G ++ I M + TAGIA D +GD I V N + V
Sbjct: 169 GQAIQSNML---CFVCKGDRITITAEVAGMEVKTAGIAQQDGVVGDNIKVINASSQKAVI 225
Query: 139 GSVVDTGTVRV 149
V V +
Sbjct: 226 ARVASPEEVVI 236
>gi|167835106|ref|ZP_02461989.1| flagellar basal body P-ring biosynthesis protein FlgA [Burkholderia
thailandensis MSMB43]
Length = 152
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++Y+ + ++ A V + I GE L + L + + + VG
Sbjct: 16 WTIYLQAKLAVQA----TYYVAARQIAPGETLTAADLVARDGDLTMLPLAVITDAQQAVG 71
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
T + + +L +S G VR++ + TIS G L++A+ G + V+
Sbjct: 72 ATTLTRVAAGLPLRQDLLKSAASVSIGQTVRVVASGQGFTISAEGSVLNNAAPGQQVRVR 131
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
+ G +V+ V D TV +
Sbjct: 132 -MAAGQIVTAIVKDAATVEI 150
>gi|74317656|ref|YP_315396.1| flagellar basal body P-ring biosynthesis protein FlgA [Thiobacillus
denitrificans ATCC 25259]
gi|74057151|gb|AAZ97591.1| putative flagella basal body P-ring formation protein [Thiobacillus
denitrificans ATCC 25259]
Length = 237
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+++Y+ + L A+ V + A VL E+ L + N+ + A + ++
Sbjct: 100 SWTVYLGADVRLIAA----YAVTRHPVPANHVLTEADLTLREGNLGNLPTDVARDVGALL 155
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G T L + ++L P + +G R++L ++ T G AL++A G+ + V
Sbjct: 156 GYRTVSGLAAGAPLRAALLRAPLAVQQGQTTRLVLNGPGFSVQTEGQALANAGRGERVRV 215
Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
K +G +VSG D V V
Sbjct: 216 K-TRSGQVVSGVAQDGQQVVV 235
>gi|319787126|ref|YP_004146601.1| flagella basal body P-ring formation protein FlgA
[Pseudoxanthomonas suwonensis 11-1]
gi|317465638|gb|ADV27370.1| flagella basal body P-ring formation protein FlgA
[Pseudoxanthomonas suwonensis 11-1]
Length = 206
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ LYV VV + + AGE L L Q S + G +G
Sbjct: 69 WRLYVPVR----QRRSQQVVVLARGVAAGETLTADALATAQRDASRLAGATLSDPAQALG 124
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
V RR L+ V+ L P ++ RG +V ++ +G + + AG AL DA + + ++V+
Sbjct: 125 QVARRTLVAGSVLGAGDLASPRIVRRGDQVALVSRRGGVEVRVAGRALGDAGVDERVSVE 184
Query: 130 NIDTGVMVSGSVVDTGTVRVVV 151
N+ + ++ G V G V V
Sbjct: 185 NLSSRRILQGRVAPGGDVLVAP 206
>gi|163738059|ref|ZP_02145475.1| Flageller protein FlgA [Phaeobacter gallaeciensis BS107]
gi|161388675|gb|EDQ13028.1| Flageller protein FlgA [Phaeobacter gallaeciensis BS107]
Length = 138
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+VP I A E++ L Q V+G R L +
Sbjct: 15 PAWADILVPVRTIRAKEIVTAEDLVLKQAEVL----GAISDPSLVIGQEARVALYAGRPM 70
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
+ P ++ R V I +G +TI G +L + G+ I V N+ + +SG +
Sbjct: 71 RPGDVGPPAIVERNDLVTIRFKRGGLTILAEGRSLGRGADGEAIRVMNLSSRTTISGRIA 130
Query: 143 DTGTVRV 149
GTV V
Sbjct: 131 ADGTVEV 137
>gi|295097207|emb|CBK86297.1| flagella basal body P-ring formation protein FlgA [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 232
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 1/148 (0%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
R + S G V S + GE++ + + M + ++
Sbjct: 85 RTAVARCGMRKFYLPFSISAQGTFWVASHSLKGGEIVQQGDITPMTGSIDDLPVGLMFEA 144
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
+D+VG R L + + L + + + G V ++++ I + G AL++A++ D
Sbjct: 145 RDIVGQRLLRPLSAGKPVLQNQLRQQWRLRAGQTVELVMSGPGFFIRSQGKALNNAAVDD 204
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
+ VK G V+G V G V + ++
Sbjct: 205 TLRVKTTG-GRNVTGKVGRDGAVTIFLE 231
>gi|83747658|ref|ZP_00944694.1| FlgA [Ralstonia solanacearum UW551]
gi|207739741|ref|YP_002258134.1| flagella basal body p-ring formation protein [Ralstonia
solanacearum IPO1609]
gi|83725710|gb|EAP72852.1| FlgA [Ralstonia solanacearum UW551]
gi|206593123|emb|CAQ60029.1| flagella basal body p-ring formation protein [Ralstonia
solanacearum IPO1609]
Length = 295
Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 1/137 (0%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ + G V + + G+ L+ L+ S + + D VG V
Sbjct: 158 AWAAWVPATIQISGTYYVAARQLPPGKTLDMGDLEARTGDLSALPPSVVLQPADAVGRVL 217
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
L P+ + L P I G V+++ G +++ G AL+ A++G V V+
Sbjct: 218 LTSLAPNQPLRAESLRMPIAIQAGQTVKLVADGGGFQVTSDGRALNQAAVGQVAQVR-TA 276
Query: 133 TGVMVSGSVVDTGTVRV 149
G ++SG G V V
Sbjct: 277 NGNVISGIAQSPGVVAV 293
>gi|146278640|ref|YP_001168799.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter
sphaeroides ATCC 17025]
gi|145556881|gb|ABP71494.1| SAF domain [Rhodobacter sphaeroides ATCC 17025]
Length = 139
Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
VL L L + VV + I A EVL L T +GL R
Sbjct: 4 VLLLLCLASPAPADTVVATRTIRALEVLGPGDLALRPETL----PGTLTEPAQAIGLEAR 59
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
L + + + P +++R V + + G + I G AL+ +GDVI V N+ +
Sbjct: 60 VTLYAGRPVGIGDVGPPGIVNRNQIVPLAYSLGALEIRAEGRALARGGVGDVIRVMNLSS 119
Query: 134 GVMVSGSVVDTGTVRV 149
VSG + D G+V V
Sbjct: 120 RSTVSGRIADDGSVHV 135
>gi|75675313|ref|YP_317734.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrobacter
winogradskyi Nb-255]
gi|74420183|gb|ABA04382.1| flagellar protein FlgA [Nitrobacter winogradskyi Nb-255]
Length = 380
Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 1/137 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ A A V + ++ +L S + + + + N A VVG+ TRR
Sbjct: 210 RLRFTGTAVETVEAAVLARDVDRNTLLKSSDIVIERRPRAEVGNNPASR-DHVVGMQTRR 268
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ + L RP ++ R V +I + ++ G A + GDV++V N+ +
Sbjct: 269 QMRAGQALHGIDLTRPDLVQRDQAVTLIYQTAGIYLTVRGKATESGTEGDVVSVLNLQSN 328
Query: 135 VMVSGSVVDTGTVRVVV 151
+SG VV G V V
Sbjct: 329 RTISGVVVGRGQVSVSP 345
>gi|163742545|ref|ZP_02149931.1| flagellar basal-body P-ring formation protein FlgA [Phaeobacter
gallaeciensis 2.10]
gi|161384130|gb|EDQ08513.1| flagellar basal-body P-ring formation protein FlgA [Phaeobacter
gallaeciensis 2.10]
Length = 138
Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+VP I A E++ L Q V+G R L +
Sbjct: 15 PAWADILVPVRTIRAKEIVTAEDLVLKQAEVL----GAISDPSLVIGQEARVALYAGRPM 70
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
+ P ++ R V I +G +TI G +L + G+ I V N+ + +SG +
Sbjct: 71 RHGDVGPPAIVERNDLVTIRFKRGGLTILAEGRSLGRGADGEAIRVMNLSSRTTISGRIA 130
Query: 143 DTGTVRV 149
GTV V
Sbjct: 131 ADGTVEV 137
>gi|16764529|ref|NP_460144.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|167994036|ref|ZP_02575128.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|168234098|ref|ZP_02659156.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|168244771|ref|ZP_02669703.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|168467124|ref|ZP_02700966.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|194447951|ref|YP_002045172.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194472156|ref|ZP_03078140.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|197263841|ref|ZP_03163915.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|224584323|ref|YP_002638121.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|729518|sp|P40131|FLGA_SALTY RecName: Full=Flagella basal body P-ring formation protein flgA;
Flags: Precursor
gi|505360|dbj|BAA04977.1| FlgA protein [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|16419690|gb|AAL20103.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194406255|gb|ACF66474.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194458520|gb|EDX47359.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|195630342|gb|EDX48968.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197242096|gb|EDY24716.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|205328041|gb|EDZ14805.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205331936|gb|EDZ18700.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205336444|gb|EDZ23208.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|224468850|gb|ACN46680.1| flagellar basal body P-ring biosynthesis protein [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|261246384|emb|CBG24193.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267992946|gb|ACY87831.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157714|emb|CBW17206.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312912160|dbj|BAJ36134.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|321223791|gb|EFX48854.1| Flagellar basal-body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|323129443|gb|ADX16873.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|332988064|gb|AEF07047.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 219
Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + I G L + + + + I+ + V+ R L
Sbjct: 87 LQVNVQATGNYVAVAAPIARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +V
Sbjct: 147 PGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIV 205
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 206 SGTVDSDGNILINL 219
>gi|21672600|ref|NP_660667.1| flagella basal body P-ring formation protein [Buchnera aphidicola
str. Sg (Schizaphis graminum)]
gi|25008461|sp|Q8K9L0|FLGA_BUCAP RecName: Full=Flagella basal body P-ring formation protein flgA;
Flags: Precursor
gi|21623231|gb|AAM67878.1| flagella basal body P-ring formation protein [Buchnera aphidicola
str. Sg (Schizaphis graminum)]
Length = 222
Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G V+ I G + L ++ + + KD++ V R +
Sbjct: 90 LQVELQAEGEYVIAKKKILRGTKIRGDDLIKVVGRLDTLPRGAYLNEKDLINRVNLRDIF 149
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I + +++ V + + + + G +LS+ + I V+ + G ++
Sbjct: 150 PFQPITSFMTRPYWLVKMNQLVTVKMKGVDFEVIFVGKSLSNGAERQKIRVQ-LKNGKVL 208
Query: 138 SGSVVDTGTVRVVV 151
+G + + V V +
Sbjct: 209 TGVINNNSEVIVFL 222
>gi|161503739|ref|YP_001570851.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|160865086|gb|ABX21709.1| hypothetical protein SARI_01824 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 267
Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + + G L + + + + I+ + ++ R L
Sbjct: 135 LQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAISLRDLA 194
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +V
Sbjct: 195 PGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIV 253
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 254 SGTVDPDGNILINL 267
>gi|288574698|ref|ZP_06393055.1| flagella basal body P-ring formation protein FlgA
[Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570439|gb|EFC91996.1| flagella basal body P-ring formation protein FlgA
[Dethiosulfovibrio peptidovorans DSM 11002]
Length = 304
Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 4/146 (2%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+RF + + + AVV + G + + L + R Y
Sbjct: 161 LRFDVAG---AEQIYPARLRWLLPAVVADSYLRKGVYIKNTDLAIAAIEVRRNRK-YYDD 216
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
KD+VG+ R + + + P +I G +R++ G++ +ST+G A+ ++G
Sbjct: 217 PKDLVGMTVERDMAKGDPFTVRITEEPELIRTGDLIRLLYRSGSLLVSTSGRAMDRGALG 276
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
D I V+N T +V G V GTV V
Sbjct: 277 DRIKVRNDRTRKIVFGIVTGPGTVEV 302
>gi|207728342|ref|YP_002256736.1| flagella basal body p-ring formation protein [Ralstonia
solanacearum MolK2]
gi|206591588|emb|CAQ57200.1| flagella basal body p-ring formation protein [Ralstonia
solanacearum MolK2]
Length = 295
Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 1/137 (0%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ + G V + + G+ L+ L+ S + + D VG V
Sbjct: 158 AWAAWVPATIQISGTYYVAARQLPPGKTLDMGDLEARTGDLSALPPSVVLQPADAVGRVL 217
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
L P+ + L P I G V+++ G +++ G AL+ A++G V V+
Sbjct: 218 LTSLAPNQPLRAESLRMPIAIQAGQTVKLVADGGGFQVTSDGRALNQAAVGQVAQVR-TA 276
Query: 133 TGVMVSGSVVDTGTVRV 149
G ++SG G V V
Sbjct: 277 NGNVISGIAQSPGVVAV 293
>gi|291336858|gb|ADD96390.1| predicted flagellar basal body P ring biosynthesis protein
[uncultured organism MedDCM-OCT-S09-C206]
Length = 239
Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
V I+ G+V++E L I G Y + I V+G + + ++ L
Sbjct: 115 VAVLIKNISKGQVISEEYLGFEARPERQIHGAY-NHISGVLGRKAKNNIAAGTILKARHL 173
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
Y + + V +I +TI+T+ IAL + +GD+IAVKN+ + + V
Sbjct: 174 DTVYSVDKNDSVLVIAANKAITITTSAIALENGQVGDMIAVKNVKSEKTFKVIITGKKKV 233
>gi|194445224|ref|YP_002040427.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194403887|gb|ACF64109.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
Length = 219
Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + + G L + + + + I+ + V+ R L
Sbjct: 87 LQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + +++ G +V++I +++ G A+++A++ V+ + +G +V
Sbjct: 147 PGQPVQLTMIRQAWLVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIV 205
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 206 SGTVDSDGNILINL 219
>gi|296283229|ref|ZP_06861227.1| flagellar basal body P-ring biosynthesis protein FlgA
[Citromicrobium bathyomarinum JL354]
Length = 156
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 19 SLFASVIGHAVVP---SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
+L A G VV + I G++L+E +VT + RG+ A + G+ RR
Sbjct: 22 ALHAQSTGDGVVADVLTRPIQRGDLLSERDFAPEEVTAAQARGSLA--AQQAAGMEARRT 79
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
L + S L P ++ RG V+I + +G +TI+ G AL+DA++G+ + V + T
Sbjct: 80 LRAGMPVRASDLAEPRLVKRGETVKISVREGALTITAMGRALADAALGEQVRVFSEATNQ 139
Query: 136 MVSGSVVDTGTVRVVV 151
+ G V GTVRV+
Sbjct: 140 TLQGVVEGAGTVRVLA 155
>gi|148256793|ref|YP_001241378.1| flagellar basal body P-ring biosynthesis protein FlgA
[Bradyrhizobium sp. BTAi1]
gi|146408966|gb|ABQ37472.1| putative flagellar protein FlgA [Bradyrhizobium sp. BTAi1]
Length = 355
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 55/117 (47%)
Query: 33 VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
++ E++ S L+ + + + G S + VG+ RR + + + L +P +
Sbjct: 205 RNVDRNEMIRSSDLQIERRPRAELAGGEPASRELAVGMQMRRAVRAGQALKTTDLAKPDL 264
Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ R V +I + ++T G AL + GDV++V N+ + V+G V G V V
Sbjct: 265 VQRDQTVTLIYQTAGIYLTTRGKALEAGTDGDVVSVLNLQSKRTVTGRVTGRGQVSV 321
>gi|190574268|ref|YP_001972113.1| flagellar basal body P-ring biosynthesis protein FlgA
[Stenotrophomonas maltophilia K279a]
gi|190012190|emb|CAQ45813.1| putative flagella basal body P-ring formation protein
[Stenotrophomonas maltophilia K279a]
Length = 218
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 58/135 (42%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ +V + I GE L + + Q + I G +G + RR
Sbjct: 82 RLFVPVKVRRNQTVLVLNRGIGTGETLTAADITTAQRDAARIAGAVLADPNAAIGRIARR 141
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L ++ + L +I RG V ++ +G++ + AG A+ DA + ++V+N+ +
Sbjct: 142 PLQAGALLSNNDLVVQRLIKRGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSR 201
Query: 135 VMVSGSVVDTGTVRV 149
+V G+V G V V
Sbjct: 202 RIVQGTVDAAGDVIV 216
>gi|332284015|ref|YP_004415926.1| flagella basal body P-ring formation protein [Pusillimonas sp.
T7-7]
gi|330427968|gb|AEC19302.1| flagella basal body P-ring formation protein [Pusillimonas sp.
T7-7]
Length = 236
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 1/139 (0%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
S S+ G+ V + I GEV++ + + + N VG +
Sbjct: 99 VWTSHVKTTLSIQGYYYVANRNIEVGEVVSLDDMAAREGDILRLANNIIFDPSQAVGYIA 158
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
+ + I S L P I RG VR + G AL + + G I V+
Sbjct: 159 SQRIRAGGPIKSSALRDPDSIQRGQMVRTEARGAGFVATGEGQALQNGAPGAQIQVR-AS 217
Query: 133 TGVMVSGSVVDTGTVRVVV 151
+G ++SG VV+ TVR+V+
Sbjct: 218 SGQVISGVVVNAHTVRIVM 236
>gi|254524107|ref|ZP_05136162.1| flagellar protein [Stenotrophomonas sp. SKA14]
gi|219721698|gb|EED40223.1| flagellar protein [Stenotrophomonas sp. SKA14]
Length = 218
Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 58/135 (42%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ +V + I GE + + + Q + I G +G + RR
Sbjct: 82 RLFVPVKVRRNQSVLVLNRGIGTGETITAADITTAQRDAARIAGAVLADPNAAIGRIARR 141
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L ++ + L +I RG V ++ +G++ + AG A+ DA + ++V+N+ +
Sbjct: 142 PLQAGALLSNNDLVVQRLIKRGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSR 201
Query: 135 VMVSGSVVDTGTVRV 149
+V G+V G V V
Sbjct: 202 RIVQGTVDAAGDVIV 216
>gi|254477189|ref|ZP_05090575.1| flagella basal body P-ring formation protein FlgA [Ruegeria sp.
R11]
gi|214031432|gb|EEB72267.1| flagella basal body P-ring formation protein FlgA [Ruegeria sp.
R11]
Length = 138
Score = 97.7 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 4/127 (3%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+VP I A E++ L +V+G R L +
Sbjct: 15 PAWAEILVPVRTIRAKEIVTAEDLALKSADVL----GALSDPSEVIGKEARVALYAGRPV 70
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
+ P ++ R V I T+G +TI G +L + G+ I V N+ + V+G +
Sbjct: 71 RAGDVGPPAIVERNDLVTIRFTRGGLTIMAEGRSLGRGADGEAIRVMNLSSRTTVTGRIA 130
Query: 143 DTGTVRV 149
GTV V
Sbjct: 131 SDGTVEV 137
>gi|315296703|gb|EFU55998.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 16-3]
Length = 219
Score = 97.7 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPCTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
PD I L+ + + + G +V +I + + + G AL++A++ V+ I +G +V
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMI-SGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 206 SGVVDADGNILINL 219
>gi|118589980|ref|ZP_01547384.1| flagellar basal body P-ring biosynthesis protein A [Stappia
aggregata IAM 12614]
gi|118437477|gb|EAV44114.1| flagellar basal body P-ring biosynthesis protein A [Stappia
aggregata IAM 12614]
Length = 151
Score = 97.7 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-H 62
+R L + V S + A+ VP I AG ++ L E +
Sbjct: 3 IRSLFLALVLVFSTAAARAAGGIDLPVPRQTIQAGTEISHQDLIERSFPTRTAQQFAVST 62
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ +VG+V RR LLP +P+S + +P ++ RG R++ + + I AL +
Sbjct: 63 NRGQLVGMVARRTLLPGQPVPISSVEKPVLVRRGEPARLVFREQGLMIIMQVEALQNGGA 122
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G+ + V+N+D+G++VSG V + GT+RV
Sbjct: 123 GNFVRVRNVDSGLVVSGRVQEDGTIRV 149
>gi|258592559|emb|CBE68868.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 351
Score = 97.7 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 59/146 (40%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
V + LY ++ S++ VV + + V+ + ++ + +
Sbjct: 203 VEVWIDGRLYRAVSLAVRLSLMREVVVVNYPLPRHTVVKGADVRLERRDIGPLAHEPLQD 262
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ VG T R L V+ + P +I +G V +++ + ++ GIA G
Sbjct: 263 LTLAVGRRTTRTLAMGEVVVSESVELPPLIQKGEVVTLMVETPRLLVTAKGIAQEVGKAG 322
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
++ VKN +G V G + T+R+
Sbjct: 323 QLVRVKNTASGREVIGKLETDKTIRI 348
>gi|315497880|ref|YP_004086684.1| flagella basal body p-ring formation protein flga [Asticcacaulis
excentricus CB 48]
gi|315415892|gb|ADU12533.1| flagella basal body P-ring formation protein FlgA [Asticcacaulis
excentricus CB 48]
Length = 258
Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 55/135 (40%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ A + +V + ++AGEV+ + + V G+ + +G R
Sbjct: 108 ATQARAEAGRTKNVLVFTRSLSAGEVIAAADIAWQPVQAHLAGGSLVSDPEAAIGKTVRL 167
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ V+ L P VI R V + +T+S G A D ++GD+I V+N +
Sbjct: 168 PVRDGGVVRPGDLTAPLVIRRAEMVMVTFEMNGVTLSMTGPAQKDGAVGDLILVQNPASK 227
Query: 135 VMVSGSVVDTGTVRV 149
++ + G+ V
Sbjct: 228 KLIEAVITGPGSAAV 242
>gi|323976555|gb|EGB71643.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
TW10509]
Length = 219
Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I ++ V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLIDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P+ I L+ L + + + G +V +I + + G AL++A++ V+ + +G ++
Sbjct: 147 PEQPIQLTQLRQAWRVKAGQRVNVIANGDGFSANAEGQALNNAAVAQNARVR-MVSGQVI 205
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 206 SGVVDADGNILINL 219
>gi|209963566|ref|YP_002296481.1| flagella basal body P-ring formation protein FlgA, putative
[Rhodospirillum centenum SW]
gi|209957032|gb|ACI97668.1| flagella basal body P-ring formation protein FlgA, putative
[Rhodospirillum centenum SW]
Length = 215
Score = 97.3 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 2/142 (1%)
Query: 9 FFSLYVLSLDSLFASVIGH--AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ ++ S A VP+ + GE++ L + V + + D
Sbjct: 71 AILVAAEGRFAVEGSAWTEIEAAVPNRRLTPGEIIQPGDLASLPVRADQVSARAVVAPTD 130
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
++G RR L+P ++ + P V+ R V + G + ++ G AL +GDV+
Sbjct: 131 LIGKQVRRALVPGRLVQSGSVGEPVVVERSKPVTLEFRSGALLLTARGRALESGGVGDVV 190
Query: 127 AVKNIDTGVMVSGSVVDTGTVR 148
V N+D+ ++G V G V
Sbjct: 191 RVINLDSNRTITGVVSGPGVVS 212
>gi|32490786|ref|NP_871040.1| hypothetical protein WGLp037 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25165992|dbj|BAC24183.1| flgA [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 225
Score = 96.9 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +F V S +I +G +++E +K + NI N S + + G ++ +
Sbjct: 91 LLKIFVKSYTEYYVASKLIRSGTIISEKDIKIVYGNTKNIPQNIILSNQKISGKISTISI 150
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
I S+L P++I +G KV +I TI GI++ + +I D++ VK + +G +
Sbjct: 151 GIGQPITTSMLKSPWIIRQGDKVPVIFVGNGFTIKCFGISIRNYTIEDIVKVK-LPSGKI 209
Query: 137 VSGSVVDTGTVRV 149
G V++ V
Sbjct: 210 FQG-VLNKNEALV 221
>gi|331657133|ref|ZP_08358095.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
TA206]
gi|331055381|gb|EGI27390.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
TA206]
Length = 156
Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 24 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 83
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
PD I L+ + + + G +V +I + + + G AL++A++ V+ I +G +V
Sbjct: 84 PDQPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMI-SGQVV 142
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 143 SGVVDADGNILINL 156
>gi|300696909|ref|YP_003747570.1| assembly protein for flagellar basal-body periplasmic P ring
[Ralstonia solanacearum CFBP2957]
gi|299073633|emb|CBJ53153.1| assembly protein for flagellar basal-body periplasmic P ring
[Ralstonia solanacearum CFBP2957]
Length = 295
Score = 96.9 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 1/137 (0%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ + G V + + G+ L+ L+ S + + D VG V
Sbjct: 158 AWAAWVPATIQISGTYYVAARQLPPGKTLDMGDLEARTGDLSALPPSVVLQPADAVGRVL 217
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
L P+ + L P I G V+++ G +++ G AL+ A++G V V+
Sbjct: 218 LTSLAPNQPLRAESLRMPIAIQAGQTVKLVADGGGFQVTSDGRALNQAAVGQVAQVR-TA 276
Query: 133 TGVMVSGSVVDTGTVRV 149
G ++SG TG V V
Sbjct: 277 NGNVISGIAQSTGVVAV 293
>gi|17548562|ref|NP_521902.1| flagellar basal body P-ring biosynthesis protein FlgA [Ralstonia
solanacearum GMI1000]
gi|17430810|emb|CAD17492.1| putative flagella basal body p-ring formation protein [Ralstonia
solanacearum GMI1000]
Length = 295
Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 1/137 (0%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ + G V + + G+ L+ L+ S + + D VG V
Sbjct: 158 AWAAWVPATIQISGTYYVAARQLPPGKTLDMGDLEARTGDLSALPPSVILQPADAVGRVL 217
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
L P+ + L P + G V+++ G +++ G AL+ A++G V V+
Sbjct: 218 LTSLAPNQPLRAESLRMPIAVQAGQTVKLVADGGGFQVTSDGRALNQAAVGQVAQVR-TA 276
Query: 133 TGVMVSGSVVDTGTVRV 149
G ++SG G V V
Sbjct: 277 NGNVISGIAQSAGVVAV 293
>gi|332994168|gb|AEF04223.1| flagellar basal body P-ring biosynthesis protein FlgA [Alteromonas
sp. SN2]
Length = 240
Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
S + VV S ++ G VL+ S L V +R + + ++G +R ++
Sbjct: 111 SAQVTRTKEIVVTSGAVSPGTVLSASNLTLASVDIKRLRYSAFTDVDALIGARMKRRIVD 170
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ ++L + +G ++ I + G M + T+GIA D IGD I V N + V
Sbjct: 171 GQAVQSNML---CFVCKGDRITIRASLGGMAVKTSGIAQQDGVIGDTIKVLNASSQKPVI 227
Query: 139 GSVVDTGTVRV 149
V V V
Sbjct: 228 AEVASAQEVVV 238
>gi|109899408|ref|YP_662663.1| flagellar basal body P-ring biosynthesis protein FlgA
[Pseudoalteromonas atlantica T6c]
gi|109701689|gb|ABG41609.1| flagella basal body P ring formation protein FlgA
[Pseudoalteromonas atlantica T6c]
Length = 236
Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +Y++ + VV S ++ G +LN+S ++ + + + +R ++ DV+G
Sbjct: 102 WYMYLMVNV----KQMQPVVVISNAVSPGTILNQSNIELINMNRALLRRTTFSNVDDVMG 157
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+R + P I + L + +G + I + M + G+A+ D +IGD I+V
Sbjct: 158 ARIKRRVRPGQPITPNNL---CFVCKGDTIIINASNSMMQVKATGVAMQDGNIGDTISVT 214
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N + ++ V T V V
Sbjct: 215 NSRSKKQINARVASTSEVVV 234
>gi|194365685|ref|YP_002028295.1| flagellar basal body P-ring biosynthesis protein FlgA
[Stenotrophomonas maltophilia R551-3]
gi|194348489|gb|ACF51612.1| flagella basal body P-ring formation protein FlgA [Stenotrophomonas
maltophilia R551-3]
Length = 218
Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 58/135 (42%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ +V + I GE L + + Q + I G +G + RR
Sbjct: 82 RLFVPVKVRRNQTVLVLNRGIGTGETLTAADITTAQRDAARIAGAVLADPNAAIGRIARR 141
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L ++ + L +I RG V ++ +G++ + AG A+ DA + ++V+N+ +
Sbjct: 142 PLQAGALLSNNDLVVQRLIKRGDNVALVSRRGSVEVRIAGRAMGDAGENERVSVENLSSR 201
Query: 135 VMVSGSVVDTGTVRV 149
+V G+V G V V
Sbjct: 202 RIVQGTVDAAGDVIV 216
>gi|149203124|ref|ZP_01880095.1| putative flagellar basal-body P-ring formation protein FlgA
[Roseovarius sp. TM1035]
gi|149143670|gb|EDM31706.1| putative flagellar basal-body P-ring formation protein FlgA
[Roseovarius sp. TM1035]
Length = 138
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
SL + L + ++ + I E+L + L Q + + ++D++G
Sbjct: 3 SLAFMLGIFLSGPALADVILATRTIRPQEILGPADLLLQQGESHSDVA-----LEDLIGQ 57
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
R L P + + P V+ R V +I +G + I T G +L A IGD + V N
Sbjct: 58 EARVALYPGRPVRQGDVGPPTVVERNQVVPLIYLRGGLEIMTEGRSLDRAGIGDHVRVMN 117
Query: 131 IDTGVMVSGSVVDTGTVRV 149
+ + VSG V G + V
Sbjct: 118 LASRATVSGRVTANGQILV 136
>gi|332305609|ref|YP_004433460.1| flagella basal body P-ring formation protein FlgA [Glaciecola
agarilytica 4H-3-7+YE-5]
gi|332172938|gb|AEE22192.1| flagella basal body P-ring formation protein FlgA [Glaciecola
agarilytica 4H-3-7+YE-5]
Length = 236
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + VV S ++ G +LN+S +K + + + +R ++ DV+G +R +
Sbjct: 106 LMVNVKQMQPVVVISNAVSPGTILNQSNIKLVDMNRALLRRTTFSTLDDVLGARIKRRVR 165
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P I + L + +G + I + M + G+A+ D +IGD I+V N + +
Sbjct: 166 PGQPITPNNL---CFVCKGDTIVINASNPMMQVKATGVAMQDGNIGDTISVTNSRSKKQI 222
Query: 138 SGSVVDTGTVRV 149
+ V T V V
Sbjct: 223 NARVASTSEVVV 234
>gi|16760049|ref|NP_455666.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29142180|ref|NP_805522.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|197251473|ref|YP_002146870.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|213161848|ref|ZP_03347558.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213417745|ref|ZP_03350863.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213424676|ref|ZP_03357441.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213648922|ref|ZP_03378975.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|238911007|ref|ZP_04654844.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|289828584|ref|ZP_06546409.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25323459|pir||AF0639 flagellar basal body P-ring protein FlgA precursor [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16502343|emb|CAD08297.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29137810|gb|AAO69371.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|197215176|gb|ACH52573.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
Length = 219
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + + G L + + + + I+ + V+ R L
Sbjct: 87 LQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +V
Sbjct: 147 PGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIV 205
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 206 SGTVDSDGNILINL 219
>gi|94312665|ref|YP_585874.1| flagellar basal body P-ring biosynthesis protein FlgA [Cupriavidus
metallidurans CH34]
gi|93356517|gb|ABF10605.1| flagellar basal body P-ring biosynthesis protein FlgA [Cupriavidus
metallidurans CH34]
Length = 245
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++ Y+ + SV+ V + + GE + + L+ Q + + V G
Sbjct: 109 WTRYMQARV----SVLTDYYVAARAMGPGETITAADLEVRQGDLAMLPRAVVTDPSQVDG 164
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
V+ + + ++ +P + G V + + + +S+ G L+DA+ G+++ V+
Sbjct: 165 AVSANRIAAGSPMRTDLVRKPIAVKSGQTVNVTVEGDSFQLSSEGKVLTDAATGNMVQVR 224
Query: 130 NIDTGVMVSGSVVDTGTV 147
+ G +VSG V TV
Sbjct: 225 -LRNGQVVSGLVRSGDTV 241
>gi|161614605|ref|YP_001588570.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|168237254|ref|ZP_02662312.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|168264035|ref|ZP_02686008.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|194737046|ref|YP_002114172.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|198242724|ref|YP_002215964.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|207857319|ref|YP_002243970.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|161363969|gb|ABX67737.1| hypothetical protein SPAB_02355 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194712548|gb|ACF91769.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197289897|gb|EDY29258.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|197937240|gb|ACH74573.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|205347335|gb|EDZ33966.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|206709122|emb|CAR33455.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|322616543|gb|EFY13452.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322620516|gb|EFY17380.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322622510|gb|EFY19355.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629661|gb|EFY26436.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322632619|gb|EFY29365.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322636886|gb|EFY33589.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322641576|gb|EFY38214.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322644066|gb|EFY40612.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650033|gb|EFY46451.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322653959|gb|EFY50282.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322658491|gb|EFY54753.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322663349|gb|EFY59551.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322670083|gb|EFY66223.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322674853|gb|EFY70944.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322676677|gb|EFY72744.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322682599|gb|EFY78618.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322686648|gb|EFY82627.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323195762|gb|EFZ80938.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323198346|gb|EFZ83450.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203170|gb|EFZ88200.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323209173|gb|EFZ94110.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323209677|gb|EFZ94606.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323217867|gb|EGA02582.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323222155|gb|EGA06539.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323224927|gb|EGA09185.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323229669|gb|EGA13792.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323232894|gb|EGA16990.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323240629|gb|EGA24671.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323242943|gb|EGA26964.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323250260|gb|EGA34149.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323252635|gb|EGA36473.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323258837|gb|EGA42490.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323261026|gb|EGA44619.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323266935|gb|EGA50420.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323269976|gb|EGA53425.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
Length = 219
Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + + G L + + + + I+ + V+ R L
Sbjct: 87 LQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +V
Sbjct: 147 PGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIV 205
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 206 SGTVDSDGNILINL 219
>gi|258404728|ref|YP_003197470.1| flagella basal body P-ring formation protein FlgA [Desulfohalobium
retbaense DSM 5692]
gi|257796955|gb|ACV67892.1| flagella basal body P-ring formation protein FlgA [Desulfohalobium
retbaense DSM 5692]
Length = 326
Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 1/141 (0%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
L S V ++ ++ S L+ S + + + VG
Sbjct: 186 GRLVHKVSVSGRVRAEAEIVTARRNLDRESIVQASDLRRESRQLSRL-DDPVYEASVAVG 244
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R + V+ SVL P ++ RG V + +G + I+ +G+A D + + I V+
Sbjct: 245 QRVVRSVRAGEVLDRSVLAAPILVQRGKPVTLEAVRGALVITASGVAQEDGGLQETIRVE 304
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
N TG + G+VV TVRV
Sbjct: 305 NRRTGKEIFGTVVSADTVRVR 325
>gi|195952533|ref|YP_002120823.1| flagella basal body P-ring formation protein FlgA [Hydrogenobaculum
sp. Y04AAS1]
gi|195932145|gb|ACG56845.1| flagella basal body P-ring formation protein FlgA [Hydrogenobaculum
sp. Y04AAS1]
Length = 235
Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
++ +V +I G+++ + +K + N S + V+G + +
Sbjct: 100 VYIEWRVPVIVAKKLITRGQIITKDDIKSAVKYIRFVPQNLVVSKRQVIGATALQNIGIG 159
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM-VS 138
I S++ +I G VR+I G + I+T A+ + +G + ++ + +
Sbjct: 160 EPIRTSMISMVPIIRYGDIVRVIYDNGYIRITTKAKAMQNGYLGKFVRLQPLGNQKTFIV 219
Query: 139 GSVVDTGTVRVVV 151
G V+D TV +
Sbjct: 220 GKVIDKDTVLISP 232
>gi|168822615|ref|ZP_02834615.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205340989|gb|EDZ27753.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|320086387|emb|CBY96160.1| Flagella basal body P-ring formation protein flgA Flags: Precursor
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
Length = 219
Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V I G L + + + + I+ + V+ R L
Sbjct: 87 LQVNVQATGNYVAVDAPIARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +V
Sbjct: 147 PGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIV 205
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 206 SGTVDSDGNILINL 219
>gi|89902473|ref|YP_524944.1| flageller protein FlgA [Rhodoferax ferrireducens T118]
gi|89347210|gb|ABD71413.1| Flageller protein FlgA [Rhodoferax ferrireducens T118]
Length = 246
Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C+ + +++++ + G A V ++AG L + + E +V + R
Sbjct: 101 LRCLEGSVKWNVFLPVTIKAY----GQAWVVKGQVSAGAALTQDDVMEAEVDWAEQREAI 156
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ +G V R L + ++ V GA++R+ + I++ G ALS
Sbjct: 157 ISNPDQWLGQVANRALTSGQALRQGMIRPAEVFRAGAQIRVQVQGAGFEITSDGQALSAG 216
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
+G VK ++ G ++SG V+D+ TVR
Sbjct: 217 VVGQPARVK-MNNGHVMSGEVLDSRTVR 243
>gi|152979911|ref|YP_001353107.1| flagellar basal body P-ring biosynthesis protein [Janthinobacterium
sp. Marseille]
gi|151279988|gb|ABR88398.1| Flagellar basal body P-ring biosynthesis protein [Janthinobacterium
sp. Marseille]
Length = 234
Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 55/139 (39%), Gaps = 5/139 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++YV + + G + + + G+ + + +++ +N+ +G
Sbjct: 98 WTIYVSAQVRVH----GEYIAAAAPLAQGQNIGPGDIAKVKGDLTNLPSGVITDASQAIG 153
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + L I +G VR+IL ++S+ AL++A+ G + V+
Sbjct: 154 RTAATTIALGAPLRQDALRNQQAIQQGQAVRVILNGDGFSVSSEARALNNANEGQLTQVR 213
Query: 130 NIDTGVMVSGSVVDTGTVR 148
G ++SG G V
Sbjct: 214 -TAAGQVISGIAKLGGIVE 231
>gi|323697473|ref|ZP_08109385.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
sp. ND132]
gi|323457405|gb|EGB13270.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
desulfuricans ND132]
Length = 337
Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 3/141 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +FA V V S +N E + ++ ++ + R +
Sbjct: 200 GKVLSRRSAVVFADVWKAVPVASRPMNRMERVTRDKVSFKRMNLAYNR-DVWDGTGGP-- 256
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R L V LS L +I RG V ++ + +S A+ +A G + V+
Sbjct: 257 WRMARTLGRGQVFTLSHLEPVPLIERGEMVNLVYNGRGIHLSIKAEAMGEAGAGQQVEVR 316
Query: 130 NIDTGVMVSGSVVDTGTVRVV 150
NI + ++ +VVD TV V
Sbjct: 317 NIQSNKIILATVVDGETVVVR 337
>gi|149201629|ref|ZP_01878603.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
TM1035]
gi|149144677|gb|EDM32706.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
TM1035]
Length = 232
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
A+V + + G VL + L+E + + RG+ S + +G + L +
Sbjct: 106 PALVLTESLPRGTVLEATHLREAPIG-ARARGDLVMSPETAIGRRLKSNLGAGQPLLARH 164
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
L + + G V I G + I AG+AL +G I V N +G +V +V
Sbjct: 165 LEHDWQVDVGGPVTIATDLGGIRIEAAGVALEPGQMGQDIRVTNAGSGEVVHVTVTGRNK 224
Query: 147 VRVVV 151
V V
Sbjct: 225 VTVRP 229
>gi|217976226|ref|YP_002360373.1| flagella basal body P-ring formation protein FlgA [Methylocella
silvestris BL2]
gi|217501602|gb|ACK49011.1| flagella basal body P-ring formation protein FlgA [Methylocella
silvestris BL2]
Length = 148
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDV 67
F ++ + A+ VP++ I G+ + + L + ++ +RGN + +
Sbjct: 4 FVAICLFGRIPAHAAESHALPVPAITIYPGDPIKDEWLVDRDFGATSPLRGNVVTNRSAI 63
Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
+G + RR LLP IP +V+ ++ G KVRI+ Q + I+T G AL D ++GDVI+
Sbjct: 64 IGKIARRTLLPGAPIPANVVAERKIVGNGTKVRIVFEQPGIEIATYGAALQDGALGDVIS 123
Query: 128 VKNIDTGVMVSGSVVDTGTVRV 149
++NI+TG+ V+G V G+VRV
Sbjct: 124 LRNIETGLTVTGVVQADGSVRV 145
>gi|24112483|ref|NP_706993.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
flexneri 2a str. 301]
gi|30062610|ref|NP_836781.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
flexneri 2a str. 2457T]
gi|24051369|gb|AAN42700.1| flagellar basal body P-ring protein FlgA precursor [Shigella
flexneri 2a str. 301]
gi|30040856|gb|AAP16587.1| flagellar basal body P-ring protein FlgA precursor [Shigella
flexneri 2a str. 2457T]
gi|281600492|gb|ADA73476.1| Flagellar basal body P-ring protein FlgA [Shigella flexneri
2002017]
gi|332759617|gb|EGJ89922.1| flagella basal body P-ring formation protein flgA [Shigella
flexneri 2747-71]
Length = 219
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
PD I L+ + + + G +V +I + + + G AL++A++ V+ + + +V
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MVSEQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 206 SGVVDADGNILINL 219
>gi|39936962|ref|NP_949238.1| flagellar basal body P-ring biosynthesis protein FlgA
[Rhodopseudomonas palustris CGA009]
gi|39650819|emb|CAE29342.1| Flageller protein FlgA [Rhodopseudomonas palustris CGA009]
Length = 342
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 1 MDCVRFLLFFSL-----YVLSLDSLFASVIGHAV--VPSVVINAGEVLNESRLKEMQVTN 53
+ RF + + + + + + I V V + + EV+ S + +
Sbjct: 174 VRSGRFDISYEISGGEGTAPARLRVTGTAIETVVATVLTRPVQRNEVIKVSDIVIERRPK 233
Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
S + + S +G+ R+ L V+ + L +P +++R V +I + ++
Sbjct: 234 SEVASDA-ASRDAAIGMQARQTLRSGQVLRSADLAKPDLVTRDQGVTLIYRAAGIYLTAR 292
Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G AL + GDV+ V N+ + ++G+V+ G V +
Sbjct: 293 GKALDTGAEGDVVNVLNLQSKRTITGTVIGRGQVAI 328
>gi|116694215|ref|YP_728426.1| flagellar basal body P-ring biosynthesis protein FlgA [Ralstonia
eutropha H16]
gi|113528714|emb|CAJ95061.1| flagellar basal body P ring formation protein [Ralstonia eutropha
H16]
Length = 263
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
SV+ V + + GE + ++ ++ Q + + G VT +
Sbjct: 133 QARVSVLTDYYVAARALGPGEPVGQADIEVRQGDLGTLPRAVITDPAQLAGAVTANRIAA 192
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
I +L + + +G V + + I++ G L+DA+ G+ + V+ + +G +V+
Sbjct: 193 GSPIRSDLLRKAIAVRQGQTVTVAVEGDAFQITSEGKVLADAATGNTVQVR-LRSGQVVN 251
Query: 139 GSVVDTGTV 147
G V TV
Sbjct: 252 GLVRSGDTV 260
>gi|200389413|ref|ZP_03216024.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|199601858|gb|EDZ00404.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
Length = 219
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ IG+ V + + G L + + + + I+ + V+ R L
Sbjct: 87 LQVNVQAIGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPKTVLDIRQIQDAVSLRDLA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +V
Sbjct: 147 PGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIV 205
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 206 SGTVDSDGNILINL 219
>gi|218700425|ref|YP_002408054.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli IAI39]
gi|218370411|emb|CAR18218.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli IAI39]
Length = 219
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R +
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDIS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
PD I L+ + + + G +V +I + + + G AL++A++ V+ + TG +V
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MVTGQVV 205
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 206 SGVVDADGNILINL 219
>gi|254470124|ref|ZP_05083528.1| flageller protein FlgA, putative [Pseudovibrio sp. JE062]
gi|211960435|gb|EEA95631.1| flageller protein FlgA, putative [Pseudovibrio sp. JE062]
Length = 322
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 5/153 (3%)
Query: 2 DCVRFLLFFSLY-----VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNI 56
RF ++ AS + + ++ G ++ + +++ + S
Sbjct: 156 RTARFKAILNVVQEGQSKPISVIGNASQMVSITTLARNLDRGAIITANDVRQERKPASRY 215
Query: 57 RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116
G + D++G+ RR + I + P ++ RGAKV ++ M IST G A
Sbjct: 216 AGREFLAAADLIGMEVRRNMRSGSTITPRDVSTPVLVKRGAKVTVLYKIPGMNISTQGKA 275
Query: 117 LSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
S+ D+I + N + + V+ V
Sbjct: 276 KSEGGKNDLIEILNPTSKKTILAEVIGKNIAVV 308
>gi|62179690|ref|YP_216107.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|62127323|gb|AAX65026.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322714160|gb|EFZ05731.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 219
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + I G L + + + + I+ + V+ R L
Sbjct: 87 LQVNVQATGNYVAVAAPIARGGKLMPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +V
Sbjct: 147 PGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIV 205
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 206 SGTVDSDGNILINL 219
>gi|320530442|ref|ZP_08031500.1| flagella basal body P-ring formation protein FlgA [Selenomonas
artemidis F0399]
gi|320137275|gb|EFW29199.1| flagella basal body P-ring formation protein FlgA [Selenomonas
artemidis F0399]
Length = 254
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 56/146 (38%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ + L + + V H +V I ++ + + +
Sbjct: 107 ISVYVDGVLQRKTTNYYRVMVYDHVLVAMTDIRQETEISPANARIEERAVDTAPAVTLTD 166
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ G V R + D VI + L P VI G V +I + + G A+ IG
Sbjct: 167 FSKLGGRVAGRWIRKDTVITPNFLAMPLVIRVGNPVTLIFDMNGIVVRAEGAAMEGGRIG 226
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
I V+N+ +G ++ G V+D TV++
Sbjct: 227 YTIRVRNVRSGKILRGKVIDGETVQI 252
>gi|119947160|ref|YP_944840.1| flagellar basal body P-ring biosynthesis protein-like protein
[Psychromonas ingrahamii 37]
gi|119865764|gb|ABM05241.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Psychromonas ingrahamii 37]
Length = 234
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+S+ +++ + + +V + + G L + + N +Y ++ + G
Sbjct: 98 WSVNIVANINYYMAVATT----ASSLPRGHSLQPEDIVFREQRIRN--NDYYPNVAGLAG 151
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
T+R L +I + Y + R ++V II Q + ++ST GIAL +GD+I VK
Sbjct: 152 KKTKRKLRAGSIIKKKDIIIEYAVIRKSEVSIIFKQDSFSLSTLGIALKSGQLGDLIKVK 211
Query: 130 NIDTGVMVSGSVVDTGTVRVVVK 152
N +G +++ +V+ V V K
Sbjct: 212 NKRSGNIITTTVIGKNKVSVESK 234
>gi|85715051|ref|ZP_01046036.1| Flageller protein FlgA [Nitrobacter sp. Nb-311A]
gi|85698248|gb|EAQ36120.1| Flageller protein FlgA [Nitrobacter sp. Nb-311A]
Length = 362
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ A A V + ++ +L S + + + + + A VVG+ TRR
Sbjct: 193 RLRFTGVAVETVEAAVLARDVDRHTLLKFSDVVMERRPKAEVGRDAASH-DHVVGMQTRR 251
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ + + L RP ++ R V +I + ++ G A + GDV++V N+ +
Sbjct: 252 QMRAGQALHGADLTRPDLVQRDEAVTLIYQAAGIYLTVRGKATEAGTEGDVVSVLNLQSK 311
Query: 135 VMVSGSVVDTGTVRVVV 151
VSG VV G V V
Sbjct: 312 RTVSGVVVGRGQVSVSP 328
>gi|77464903|ref|YP_354407.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter
sphaeroides 2.4.1]
gi|332559801|ref|ZP_08414123.1| FlgA2 [Rhodobacter sphaeroides WS8N]
gi|77389321|gb|ABA80506.1| putative flagellar basal-body P-ring formation protein FlgA
[Rhodobacter sphaeroides 2.4.1]
gi|332277513|gb|EGJ22828.1| FlgA2 [Rhodobacter sphaeroides WS8N]
Length = 139
Score = 95.4 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 45/127 (35%), Gaps = 4/127 (3%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
VV + + A +L L + +G R L +
Sbjct: 13 PASAETVVAARTVRALSILGPEDLALAPQDM----PGALAELSQALGQEARVTLYAGRPV 68
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
+ L P +I R V + G + I G ALS +GD I V N+ + VSG +
Sbjct: 69 RAADLGPPAIIDRNQLVPLSYRLGALEIRAEGRALSRGGVGDEIRVMNLSSRTTVSGRIA 128
Query: 143 DTGTVRV 149
+ G V V
Sbjct: 129 EDGAVHV 135
>gi|325497620|gb|EGC95479.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
fergusonii ECD227]
Length = 156
Score = 95.4 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV + I G V+N S + + + + V ++ R +
Sbjct: 24 LQVNVQASGNYVVAAAPITRGGVVNASNVTLKRGRLDQLPPRTVLEVAQVQDAISLRDIA 83
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L++L + + I G +V++I ++ G AL++A++ V+ + +G +V
Sbjct: 84 PGQPVQLNMLRQAWRIKAGQRVQVIAQGDGFNVNAEGQALNNAAVAQTARVRML-SGQVV 142
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 143 SGIVGADGNILINL 156
>gi|299068728|emb|CBJ39967.1| assembly protein for flagellar basal-body periplasmic P ring
[Ralstonia solanacearum CMR15]
Length = 295
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 1/137 (0%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ + G V + + G+ L+ L+ S + + D VG V
Sbjct: 158 AWAAWVPATIQISGTYYVAAHQLPPGKTLDMGDLEARTGDLSALPPSVVLQPADAVGRVL 217
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
L P+ + L P + G V+++ G +S+ G AL+ A++G V V+
Sbjct: 218 LTSLAPNQPLRAESLRMPIAVQAGQTVKLVADGGGFQVSSDGRALNQAAVGQVAQVR-TA 276
Query: 133 TGVMVSGSVVDTGTVRV 149
G ++SG G V V
Sbjct: 277 NGNVISGIAQSAGVVAV 293
>gi|309779443|ref|ZP_07674204.1| flagella basal body p-ring formation protein [Ralstonia sp.
5_7_47FAA]
gi|308921684|gb|EFP67320.1| flagella basal body p-ring formation protein [Ralstonia sp.
5_7_47FAA]
Length = 268
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 1/137 (0%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ + G V S ++ G+ L+ L+ S + + DVVG V
Sbjct: 131 AWAAWVPATIQITGTYYVASHQLSPGKTLDLGDLEARTGDLSTLPASVVQQPADVVGHVL 190
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
+ + + L P + G V++I G +S+ G AL+ A++G V V+
Sbjct: 191 LTSVAANQPLRAESLRLPMAVQAGQTVKLIAEGGGFQVSSDGRALNQAAVGQVAQVR-TA 249
Query: 133 TGVMVSGSVVDTGTVRV 149
G +VSG G V +
Sbjct: 250 NGNVVSGIAQSAGVVAI 266
>gi|13472577|ref|NP_104144.1| flagellar basal body P-ring biosynthesis protein FlgA
[Mesorhizobium loti MAFF303099]
gi|14023323|dbj|BAB49930.1| flagellar protein; FlgA [Mesorhizobium loti MAFF303099]
Length = 174
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-HSIKDVVGLVTRRVLLPDHVIPLSV 86
++P+ VI GE + + LK++ + + + +++ G + +R LLP IP +
Sbjct: 49 VLIPNRVIYPGETIELAALKQVTLIAGKHKPDAMATHAEELQGKIAKRTLLPGRYIPTAA 108
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ +++ +GA V++ G +TI+ + L S GD+I V+N D+G ++SG+V+ GT
Sbjct: 109 IREAWLVEQGAAVQVFFIAGGLTITATAVTLQPGSAGDLIKVRNSDSGKILSGTVMADGT 168
Query: 147 VRVVV 151
++V
Sbjct: 169 IQVSA 173
>gi|332531614|ref|ZP_08407511.1| flagellar protein FlgA [Hylemonella gracilis ATCC 19624]
gi|332038977|gb|EGI75406.1| flagellar protein FlgA [Hylemonella gracilis ATCC 19624]
Length = 288
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
M CV+ +S+ + V+G A V + AG+ + + L+ +V +
Sbjct: 144 MRCVQGATRWSV----TLPVQVQVMGSAWVLRANVPAGQAVTDQDLERREVDLAEDNSPV 199
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ G VT R L + ++ V + GA+VR+++ IS G ALS
Sbjct: 200 LAT-DAWEGQVTSRGLRAGQTLRQNMFRAAKVFTSGAQVRVLVQGSGFQISAPGRALSVG 258
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+G + V+ ++ G +++ +VVD TVRV
Sbjct: 259 VVGQLAQVR-MENGRVMNATVVDARTVRV 286
>gi|221639445|ref|YP_002525707.1| Flagellar basal-body P-ring formation protein FlgA [Rhodobacter
sphaeroides KD131]
gi|221160226|gb|ACM01206.1| Flagellar basal-body P-ring formation protein FlgA [Rhodobacter
sphaeroides KD131]
Length = 220
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
V + G V+ L ++ D++G + L P + L
Sbjct: 103 VALIRPLARGSVIAAEDLASGPLSTRWH--------ADLIGRRLKVALAPGQPVLPRHLE 154
Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
++++RG V + + G + + AL D ++GD++ V+N+ +G ++ +V
Sbjct: 155 PDWLVTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVEVRNLSSGAILRATVTARNLAE 214
Query: 149 VVV 151
V
Sbjct: 215 VRP 217
>gi|56413840|ref|YP_150915.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|167553040|ref|ZP_02346790.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|197362763|ref|YP_002142400.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|56128097|gb|AAV77603.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197094240|emb|CAR59745.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|205322449|gb|EDZ10288.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
Length = 219
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + + G L + + + + I+ + V+ R L
Sbjct: 87 LQVNVQATGNYVAVAAPVARGGKLTSANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +V
Sbjct: 147 PGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIV 205
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 206 SGTVDSDGNILINL 219
>gi|213865509|ref|ZP_03387628.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
Length = 219
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + + G L + + + + I+ + V+ R L
Sbjct: 87 LQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + + + G +V++I ++++ G A+++A++ V+ + +G +V
Sbjct: 147 PGQPVQLTMIRQAWRVKAGQRVQVIANGEGVSVNAEGQAMNNAAVAQNARVR-MTSGQIV 205
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 206 SGTVDSDGNILINL 219
>gi|134095101|ref|YP_001100176.1| basal-body periplasmic P ring assembly protein [Herminiimonas
arsenicoxydans]
gi|133739004|emb|CAL62052.1| Flagella basal body P-ring formation protein FlgA precursor
[Herminiimonas arsenicoxydans]
Length = 235
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 55/139 (39%), Gaps = 5/139 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++YV + + G + + ++ G+ + + + ++ + + +G
Sbjct: 99 WTIYVQAKVQVH----GEYIAAAAPLSQGQTIGQGDIATLKGDLTTLPAGVITDASQAIG 154
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + L I +G VR+++ ++S+ AL++A+ G + V+
Sbjct: 155 RTAATTVALGAPLRQDALRNQQAIQQGQAVRVVVNGAGFSVSSEARALNNANEGQLTQVR 214
Query: 130 NIDTGVMVSGSVVDTGTVR 148
G ++SG G V
Sbjct: 215 TPA-GQVISGIAKLGGIVE 232
>gi|312115248|ref|YP_004012844.1| flagella basal body P-ring formation protein FlgA [Rhodomicrobium
vannielii ATCC 17100]
gi|311220377|gb|ADP71745.1| flagella basal body P-ring formation protein FlgA [Rhodomicrobium
vannielii ATCC 17100]
Length = 155
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGH-----AVVPSVVINAGEVLNESRLKEMQVTNSN 55
M + + + V + L + VP + G+V+ E L Q++ +
Sbjct: 1 MGSIMKSVMITAAVAAPFFLATPSLAEEGGRIVPVPKRALYPGDVITEEMLTSKQLSENE 60
Query: 56 IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115
+ VVG +RR LLP IP + P V+ +G V ++ + I+ +
Sbjct: 61 NASAFITEASGVVGKTSRRTLLPGLPIPKVAIREPVVVRQGKAVSLVYESDTVRITGLAM 120
Query: 116 ALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
AL S+G+ I+ +N D+GV++ G V+ G+VRV
Sbjct: 121 ALQSGSVGETISARNPDSGVVIHGVVMADGSVRV 154
>gi|192292790|ref|YP_001993395.1| flagellar basal body P-ring biosynthesis protein FlgA
[Rhodopseudomonas palustris TIE-1]
gi|192286539|gb|ACF02920.1| flagella basal body P-ring formation protein FlgA [Rhodopseudomonas
palustris TIE-1]
Length = 342
Score = 94.6 bits (234), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 1 MDCVRFLLFFSL-----YVLSLDSLFASVIGHAV--VPSVVINAGEVLNESRLKEMQVTN 53
+ RF + + + + + + I V V + + EV+ S + +
Sbjct: 174 VRSGRFDISYEISGGEGTAPARLRVTGTAIETVVATVLTRPVQRNEVIKVSDIVIERRPK 233
Query: 54 SNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
S + + A +G+ R+ L V+ + L +P +++R V +I + ++
Sbjct: 234 SEVASDAAS-RDAAIGMQARQTLRSGQVLRGADLAKPDLVTRDQGVTLIYRAAGIYLTAR 292
Query: 114 GIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G AL + GDV+ V N+ + ++G+V+ G V +
Sbjct: 293 GKALDTGAEGDVVNVLNLQSKRTITGTVIGRGQVAI 328
>gi|324113867|gb|EGC07841.1| flagella basal body P-ring formation protein FlgA [Escherichia
fergusonii B253]
Length = 156
Score = 94.6 bits (234), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV + I G V+N S + + + + V ++ R +
Sbjct: 24 LQVNIQASGNYVVAAAPITRGGVVNASNVTLKRGRLDQLPPRTVLEVAQVQDAISLRDIA 83
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L++L + + I G +V++I ++ G AL++A++ V+ + +G +V
Sbjct: 84 PGQPVQLNMLRQAWRIKAGQRVQVIAQGDGFNVNAEGQALNNAAVAQTARVRML-SGQVV 142
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 143 SGIVGADGNILINL 156
>gi|220924577|ref|YP_002499879.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
nodulans ORS 2060]
gi|219949184|gb|ACL59576.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
nodulans ORS 2060]
Length = 343
Score = 94.6 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 52/136 (38%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
S + V + + GE + + + + + +VG V +
Sbjct: 193 ASLRVSGQVIEMIEVAVLTRALARGESVGAADVTVQRRARDGSSADATADAASLVGQVAQ 252
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R L P + L RP ++ RG V I+ ++++ G A +G V+AV N +
Sbjct: 253 RALAPGQKLRAGDLARPELVQRGETVTILYEGPGVSLALRGQAKEGGPLGAVVAVVNPVS 312
Query: 134 GVMVSGSVVDTGTVRV 149
++ +V G V V
Sbjct: 313 KKVLQATVSGPGRVSV 328
>gi|313894969|ref|ZP_07828528.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp.
oral taxon 137 str. F0430]
gi|312976422|gb|EFR41878.1| flagella basal body P-ring formation protein FlgA [Selenomonas sp.
oral taxon 137 str. F0430]
Length = 233
Score = 94.6 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 57/146 (39%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ + L + + +V +V I ++ + + + +
Sbjct: 86 ISVYVDGVLQRKTTNYYRVTVYDRVLVAMTDIRQEAEISPANARIEERAVDTVPAVTLTD 145
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ G V R + D VI + L P VI G V +I + + G A+ IG
Sbjct: 146 FSKLGGRVAGRWIRKDTVITPNFLAMPLVIRVGNPVTLIFDMNGIVVRAEGAAMEGGRIG 205
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
I V+N+ +G ++ G V+D TV++
Sbjct: 206 YTIRVRNVRSGKILRGKVIDAETVQI 231
>gi|204930732|ref|ZP_03221605.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|204320191|gb|EDZ05395.1| flagella basal body P-ring formation protein FlgA [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
Length = 219
Score = 94.6 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + + G L + + + + I+ + V+ R L
Sbjct: 87 LQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +V
Sbjct: 147 PGLPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIV 205
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 206 SGTVDSDGNILINL 219
>gi|149927794|ref|ZP_01916045.1| Flageller protein FlgA [Limnobacter sp. MED105]
gi|149823416|gb|EDM82647.1| Flageller protein FlgA [Limnobacter sp. MED105]
Length = 238
Score = 94.6 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 1/148 (0%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
VR S + V +V I +G+ L + ++ + S + +
Sbjct: 92 VRVQCVGSDTAPFFVGVDVKVWAPVLVVKGTIQSGQTLGLNDVEFRTMDLSQLSHGWVSD 151
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ + R L P ++ L ++ G V++++ I +A+ +A +G
Sbjct: 152 LAHLNNKTAARQLWPGTLLKHDYLRGQALVKNGDTVKVMMKGPGFAIGGTAVAMGEAELG 211
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
+V+ +K G ++ G D V V +
Sbjct: 212 EVVKIKTTQ-GKILHGVARDALLVEVSL 238
>gi|89068732|ref|ZP_01156118.1| Flageller protein FlgA [Oceanicola granulosus HTCC2516]
gi|89045695|gb|EAR51757.1| Flageller protein FlgA [Oceanicola granulosus HTCC2516]
Length = 218
Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 57/134 (42%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
A VP I E++ E+ L +++ + ++ +VG+ RRVL
Sbjct: 84 RVMGLALATVPVPVPVRRILPDEIIAEADLDVVRLPMGRVGAFAVVDLEALVGMQVRRVL 143
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+ + P VI RG V I + G + ++ G A++ A G + V N+ + +
Sbjct: 144 SQGRPVMSQSVIEPLVIERGDAVSIRYSDGALELTAPGRAMAGAHRGQDVRVVNLASNRL 203
Query: 137 VSGSVVDTGTVRVV 150
V+G G V V+
Sbjct: 204 VTGIAARDGIVEVL 217
>gi|72122783|gb|AAZ64969.1| Flageller protein FlgA [Ralstonia eutropha JMP134]
Length = 290
Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
SV+ V + GE + + L+ Q S + VVG VT +
Sbjct: 160 QARVSVLSDYYVAVRALGPGEPVTPADLEVRQGDLSTLPKAVITDPSQVVGAVTANRVAA 219
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ +L + + G V + + I++ G L+DA+IG+ + ++ + G +VS
Sbjct: 220 GSPMRTDLLKKSIAVRSGQTVTVAVEGDAFQITSEGKVLADAAIGNSVQIR-LRNGQVVS 278
Query: 139 GSVVDTGTV 147
G V TV
Sbjct: 279 GLVRSGDTV 287
>gi|117926378|ref|YP_866995.1| flagellar basal body P-ring biosynthesis protein-like protein
[Magnetococcus sp. MC-1]
gi|117610134|gb|ABK45589.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Magnetococcus sp. MC-1]
Length = 236
Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 58/144 (40%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
V L+ + + + V + +++ + + S Y
Sbjct: 88 VTVLVDGTAQAVVDAVVVIRKNVTVAVLKRQLKRDDIVALGDIDWQTIQISREGFRYVSD 147
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
++++VG R + + + S P + RG +VR++L G + I+T G+A D +G
Sbjct: 148 VREIVGKAASRPVRANIALQASWFEEPVAVERGDRVRVLLKDGALVINTVGVAGKDGRVG 207
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTV 147
+ I V+N+ + V+ G V
Sbjct: 208 EAILVRNLSSNKSFLARVMAPGQV 231
>gi|83955139|ref|ZP_00963795.1| Flageller protein FlgA [Sulfitobacter sp. NAS-14.1]
gi|83840468|gb|EAP79641.1| Flageller protein FlgA [Sulfitobacter sp. NAS-14.1]
Length = 227
Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 62/137 (45%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V A V VP+ I E++ + +++ + + +VG R
Sbjct: 90 VPQRVWGLAMVTLTVPVPNRRIVPDEIVRAQDVSLVEMPMQRVGSYAINEYDQLVGQQVR 149
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R+L+ +P + + P +ISRG KV+I LT G + ++ G AL DA G + V N+ +
Sbjct: 150 RMLVTGRPVPRNSVMPPRIISRGEKVKIRLTHGGLQLTAKGRALDDAHKGQELRVVNLSS 209
Query: 134 GVMVSGSVVDTGTVRVV 150
+S + G V VV
Sbjct: 210 NKALSTIAMAAGVVEVV 226
>gi|83944161|ref|ZP_00956617.1| Flageller protein FlgA [Sulfitobacter sp. EE-36]
gi|83845028|gb|EAP82909.1| Flageller protein FlgA [Sulfitobacter sp. EE-36]
Length = 227
Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 63/137 (45%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V A V VP+ I E++ + +++ + + + +VG R
Sbjct: 90 VPQRVWGLAMVTLTVPVPNRRIVPDEIVRAQDVSLVEMPMQRVGSYAINEYEQLVGQQVR 149
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R+L+ +P + + P +ISRG KV+I LT G + ++ G AL DA G + V N+ +
Sbjct: 150 RMLVTGRPVPRNSVMPPRIISRGEKVKIRLTHGGLQLTAKGRALDDAHKGQELRVVNLSS 209
Query: 134 GVMVSGSVVDTGTVRVV 150
+S + G V VV
Sbjct: 210 NKALSTIAMAAGVVEVV 226
>gi|163782719|ref|ZP_02177715.1| flagellar protein FlgA [Hydrogenivirga sp. 128-5-R1-1]
gi|159881840|gb|EDP75348.1| flagellar protein FlgA [Hydrogenivirga sp. 128-5-R1-1]
Length = 211
Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 61/135 (45%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ +L +V + GE + ++ ++ S ++++ V
Sbjct: 74 FRRITATLELEWKCSLIVAQEDLLKGERVYPWQVAYEEMFMGRCPRQDIESTEELINYVA 133
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
R + V+ S L + ++ RG +V +I GN+ IS +G AL GDVI V++ +
Sbjct: 134 LRTVKRGEVLVKSYLKKEPLVRRGQEVSVIYRSGNLEISFSGKALDTGFYGDVIRVRSFN 193
Query: 133 TGVMVSGSVVDTGTV 147
TG ++ G V+ G+V
Sbjct: 194 TGKVLRGRVISEGSV 208
>gi|162147477|ref|YP_001601938.1| flagellar basal body P-ring biosynthesis protein FlgA
[Gluconacetobacter diazotrophicus PAl 5]
gi|161786054|emb|CAP55636.1| putative flagellar protein flgA precursor [Gluconacetobacter
diazotrophicus PAl 5]
Length = 325
Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 54/138 (39%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ + +V + ++A VL+ S ++ + + G+
Sbjct: 159 SFMLTGTVHAAQRVLVFARALSADTVLSSSDVRVDDAYVGRLSDGVMTDAGGIEGMTLMH 218
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
++ + LHR V+ +G + I T + ++ G AL D G + N+ +G
Sbjct: 219 NVVAGQPVLDRDLHRSVVMHKGNPILIAFTVPGIHLAATGRALEDGGDGQYVHALNVGSG 278
Query: 135 VMVSGSVVDTGTVRVVVK 152
++V+G V ++V +
Sbjct: 279 MIVTGRVTSASEIQVDSR 296
>gi|209545586|ref|YP_002277815.1| flagellar basal body P-ring biosynthesis protein FlgA
[Gluconacetobacter diazotrophicus PAl 5]
gi|209533263|gb|ACI53200.1| flagella basal body P-ring formation protein FlgA
[Gluconacetobacter diazotrophicus PAl 5]
Length = 326
Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 54/138 (39%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ + +V + ++A VL+ S ++ + + G+
Sbjct: 160 SFMLTGTVHAAQRVLVFARALSADTVLSSSDVRVDDAYVGRLSDGVMTDAGGIEGMTLMH 219
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
++ + LHR V+ +G + I T + ++ G AL D G + N+ +G
Sbjct: 220 NVVAGQPVLDRDLHRSVVMHKGNPILIAFTVPGIHLAATGRALEDGGDGQYVHALNVGSG 279
Query: 135 VMVSGSVVDTGTVRVVVK 152
++V+G V ++V +
Sbjct: 280 MIVTGRVTSASEIQVDSR 297
>gi|149912835|ref|ZP_01901369.1| putative flagellar basal-body P-ring formation protein FlgA
[Roseobacter sp. AzwK-3b]
gi|149813241|gb|EDM73067.1| putative flagellar basal-body P-ring formation protein FlgA
[Roseobacter sp. AzwK-3b]
Length = 139
Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 4/136 (2%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
L L V +V + I E++ + + A+ + V+G R
Sbjct: 7 LILLLAAGPVSADMIVAARTIRPQEIITLGDVGFQAGEIA----GIANRLDQVIGQEARV 62
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L I L+ + P V+ R V +I + I+T G AL A +G++I V N+ +
Sbjct: 63 ALYAGRPIRLTDIGEPAVVDRNQMVSLIFESHGLRIATEGRALDRAGVGEMIRVMNMSSR 122
Query: 135 VMVSGSVVDTGTVRVV 150
VSG V+ G +RV+
Sbjct: 123 ATVSGEVLPDGRIRVM 138
>gi|118581850|ref|YP_903100.1| SAF domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118504560|gb|ABL01043.1| SAF domain protein [Pelobacter propionicus DSM 2379]
Length = 238
Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 58/134 (43%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ + VV IN G V+ + L + + ++G Y +D VG R L
Sbjct: 104 TVWVEVEALVDMVVTVRQINHGSVITTADLALRKQDIAAVQGRYLARTEDAVGKKARVTL 163
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
P+ I L + +I G V II M I+ G + S + GD I V+N+ +
Sbjct: 164 RPNAAIRSDQLEKVPLIRAGQLVTIIAENERMRITATGKSKSAGAEGDTITVQNLGSLKE 223
Query: 137 VSGSVVDTGTVRVV 150
+ V+D+ TV +V
Sbjct: 224 LPARVLDSTTVLIV 237
>gi|260574400|ref|ZP_05842404.1| flagella basal body P-ring formation protein FlgA [Rhodobacter sp.
SW2]
gi|259023296|gb|EEW26588.1| flagella basal body P-ring formation protein FlgA [Rhodobacter sp.
SW2]
Length = 139
Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+RFL L+ ++V + I A VL E+ + +
Sbjct: 1 MRFLALILLFPTL-------AQADSLVATRTIRAQTVLAETDMTLVAADI----PGALTD 49
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+GL R L I L P ++ R V + G +TI T G A++ +G
Sbjct: 50 TGAALGLEARTTLYAGRPIRPGDLGAPAIVERNQVVSLAYHAGPLTILTEGRAMARGGVG 109
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
DVIAV N+D+ VSG + G V+V
Sbjct: 110 DVIAVMNLDSRTTVSGRIDAEGMVQV 135
>gi|85705077|ref|ZP_01036177.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
217]
gi|85670399|gb|EAQ25260.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
217]
Length = 232
Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
A+V + + G VL L+E+++ + + + +++ +G + L + + L
Sbjct: 107 ALVLAESLPRGTVLRAEHLREVEIATTG-QSDLVEAVETAIGRRLKSNLGAGQPLLVRHL 165
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
+ + G V I+ G + I AG+AL +G I V N +G +V +V V
Sbjct: 166 EHDWQVEEGGPVTIVTAMGGIRIEAAGVALEAGQVGQAIRVTNAGSGDVVHVTVTGRNKV 225
Query: 148 RVVV 151
V
Sbjct: 226 TVRP 229
>gi|317050616|ref|YP_004111732.1| flagella basal body P-ring formation protein FlgA
[Desulfurispirillum indicum S5]
gi|316945700|gb|ADU65176.1| flagella basal body P-ring formation protein FlgA
[Desulfurispirillum indicum S5]
Length = 249
Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRV 75
+ + A VP I GEVL E + + R +V+ R
Sbjct: 114 QVRAVINHMVEAYVPVRNITRGEVLREGDFRRQLFPATQARNAMDIGETDFASHIVSTRN 173
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
L ++ + L R Y + RG V +I +T+S A +A A +GDV+ +KN +G
Sbjct: 174 LQEGQIVRTTDLRREYAVQRGDIVEVIYRHDRLTLSMAAVATERAYLGDVVRLKNPSSGR 233
Query: 136 MVSGSVVDTGTVRVV 150
+++ ++ ++
Sbjct: 234 ILTARLLQGKKAEII 248
>gi|187926958|ref|YP_001893303.1| flagella basal body P-ring formation protein FlgA [Ralstonia
pickettii 12J]
gi|241665287|ref|YP_002983646.1| flagellar basal body P-ring biosynthesis protein FlgA [Ralstonia
pickettii 12D]
gi|187728712|gb|ACD29876.1| flagella basal body P-ring formation protein FlgA [Ralstonia
pickettii 12J]
gi|240867314|gb|ACS64974.1| flagella basal body P-ring formation protein FlgA [Ralstonia
pickettii 12D]
Length = 291
Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 1/137 (0%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ + G V S ++ G+ L+ L+ S + + DVVG V
Sbjct: 154 AWAAWVPATIQITGTYYVASHQLSPGKTLDMGDLEARTGDLSMLPPSVVQQPADVVGRVL 213
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
+ + + L P + G V+++ G +++ G AL+ A++G V V+
Sbjct: 214 VTSVAANQPLRAESLRLPIAVQAGQTVKLVAEGGGFQVTSDGRALNQAAVGQVAQVR-TA 272
Query: 133 TGVMVSGSVVDTGTVRV 149
G +VSG G V +
Sbjct: 273 NGNVVSGIAQSVGVVAI 289
>gi|307546972|ref|YP_003899451.1| flagellar basal body P-ring biosynthesis protein FlgA [Halomonas
elongata DSM 2581]
gi|307218996|emb|CBV44266.1| flagellar basal body P-ring biosynthesis protein FlgA [Halomonas
elongata DSM 2581]
Length = 235
Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 48/133 (36%), Gaps = 1/133 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
SVIG + + + AGE + L + + +G V R L
Sbjct: 102 FLQAEVSVIGAYLETARDVAAGETITRDHLVIRHGNLARLPRQTLREAGQAIGRVAMRPL 161
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
V+ L +P ++ RG V + ++ AL+ GD I V+ +D +
Sbjct: 162 SEGQVLRGYQLRKPRLVQRGEAVTLEARGSGFRVTRPAEALAPGGRGDRIRVR-LDNREI 220
Query: 137 VSGSVVDTGTVRV 149
+ VV + V
Sbjct: 221 LHARVVGERRLVV 233
>gi|205353089|ref|YP_002226890.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|205272870|emb|CAR37799.1| flagellar basal body P-ring protein FlgA precursor [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|326628169|gb|EGE34512.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 219
Score = 93.5 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + + G L + + + + I+ + V+ R L
Sbjct: 87 LQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + + + G +V++I +++ G +++A++ V+ + +G +V
Sbjct: 147 PGQPVQLTMIRQAWRVEAGQRVQVIANGEGFSVNAEGQVMNNAAVAQNARVR-MTSGQIV 205
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 206 SGTVDSDGNILINL 219
>gi|300693333|ref|YP_003749306.1| flagella basal body p-ring formation protein [Ralstonia
solanacearum PSI07]
gi|299075370|emb|CBJ34665.1| flagella basal body p-ring formation protein [Ralstonia
solanacearum PSI07]
Length = 293
Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 1/137 (0%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ + G V + + G+ L+ L+ S + + D VG V
Sbjct: 156 AWAAWVPATIQISGTYYVAARQLPPGKTLDMGDLEARTGDLSILPASVVQQPADAVGRVL 215
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
L P+ + L P + G V+++ G +++ G AL+ A++G V V+
Sbjct: 216 LTSLAPNQPLRAESLRMPIAVQAGQTVKLVAEGGGFQVTSDGRALNQAAVGQVAQVR-TA 274
Query: 133 TGVMVSGSVVDTGTVRV 149
G ++SG G V V
Sbjct: 275 NGNVISGIAQSVGVVAV 291
>gi|294679030|ref|YP_003579645.1| flagella basal body P-ring formation protein FlgA [Rhodobacter
capsulatus SB 1003]
gi|294477850|gb|ADE87238.1| flagella basal body P-ring formation protein FlgA [Rhodobacter
capsulatus SB 1003]
Length = 141
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 49/123 (39%), Gaps = 4/123 (3%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
VV + + A V+ ES L + VGL TR + P I + L
Sbjct: 22 VVAARTLRAQTVITESDLALSEEDV----PGALTDPLSAVGLETRTAIYPQQPISAADLV 77
Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
P VI R V + G+++I T G AL ++GD I V NI + + + G
Sbjct: 78 APAVIERNQMVPLAYRDGSLSILTEGRALDRGAVGDTIRVMNITSKATLFAQLGADGVAY 137
Query: 149 VVV 151
V
Sbjct: 138 VQP 140
>gi|220932493|ref|YP_002509401.1| Flagellar basal body P-ring biosynthesis protein [Halothermothrix
orenii H 168]
gi|219993803|gb|ACL70406.1| Flagellar basal body P-ring biosynthesis protein [Halothermothrix
orenii H 168]
Length = 336
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 59/149 (39%), Gaps = 2/149 (1%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ ++ ++ + +V + I G + + L + +RG +
Sbjct: 187 IEIIVNGKVWRRIYLGYKVELRMKVLVATRNIKRGSNICKEDLALTTEKITGVRGEIIND 246
Query: 64 IKD--VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
D + + + L ++ L +P VI G V + N+ +ST+ AL
Sbjct: 247 FNDPRLSYSIVKIPLQKGEILTTDHLEQPVVIHWGDIVEAEVIVRNVKVSTSVKALGSGR 306
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
+GD + V N +TG V+++ VRVV
Sbjct: 307 VGDYVKVINPETGYEFKARVINSRLVRVV 335
>gi|161611269|ref|YP_299813.2| flagellar basal body P-ring biosynthesis protein FlgA [Ralstonia
eutropha JMP134]
Length = 249
Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
SV+ V + GE + + L+ Q S + VVG VT +
Sbjct: 119 QARVSVLSDYYVAVRALGPGEPVTPADLEVRQGDLSTLPKAVITDPSQVVGAVTANRVAA 178
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ +L + + G V + + I++ G L+DA+IG+ + ++ + G +VS
Sbjct: 179 GSPMRTDLLKKSIAVRSGQTVTVAVEGDAFQITSEGKVLADAAIGNSVQIR-LRNGQVVS 237
Query: 139 GSVVDTGTV 147
G V TV
Sbjct: 238 GLVRSGDTV 246
>gi|226939515|ref|YP_002794588.1| flagella basal body P-ring formation protein FlgA [Laribacter
hongkongensis HLHK9]
gi|226714441|gb|ACO73579.1| probable flagella basal body P-ring formation protein FlgA
[Laribacter hongkongensis HLHK9]
Length = 224
Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 10 FSLYVLSLDSLFASVIGHAVVP-SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+SL + V +V + AG V+ ++ N I+DVV
Sbjct: 88 WSLRLPVRV-----VSQQGLVTFIRPLEAGAVITAEDIRLEPSRNGRAPAGSFTRIEDVV 142
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G R + + +L P ++ + +V++ ++ G+AL++ S G+VI V
Sbjct: 143 GKSLGRGVGTGVTLRREMLASPLLVRQNERVKVQAIGPAFSVWADGVALTNGSEGEVIGV 202
Query: 129 KNIDTGVMVSGSVVDTGTVRVV 150
+ G + G V G++++
Sbjct: 203 RMPG-GRTIQGVVAADGSIQLR 223
>gi|188592113|ref|YP_001796711.1| flagellar basal body p-ring biosynthesis protein flga [Cupriavidus
taiwanensis LMG 19424]
gi|170938487|emb|CAP63474.1| FlgA: Flagella basal body P-ring formation protein ; signal peptide
[Cupriavidus taiwanensis LMG 19424]
Length = 260
Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
SV+ V + + AGE + ++ ++ Q + + G VT +
Sbjct: 130 QARVSVLTDYYVAARALGAGEPVGQADVEIRQGDLGALPRAVITDPAQLAGAVTANRIAA 189
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ +L + + +G V + + I++ G L+DA+ G+ + V+ + G +V+
Sbjct: 190 GSPLRTDLLRKAIAVRQGQTVTVAVEGAAFQITSEGKVLADAATGNTVQVR-LRNGQVVN 248
Query: 139 GSVVDTGTV 147
G V TV
Sbjct: 249 GLVRSGDTV 257
>gi|77463603|ref|YP_353107.1| flagellar basal-body P-ring formation protein FlgA [Rhodobacter
sphaeroides 2.4.1]
gi|77388021|gb|ABA79206.1| flagellar basal-body P-ring formation protein FlgA [Rhodobacter
sphaeroides 2.4.1]
Length = 222
Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 8/123 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
V + G V+ L + D++G + L P + L
Sbjct: 105 VALIRPLARGSVIAAEDLASGPESARWH--------ADLIGRRLKVALAPGQPVLPRHLE 156
Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
++++RG V + + G + + AL D ++GD++ V+N+ +G + +V
Sbjct: 157 PDWLVTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVEVRNLSSGATLRATVTARNLAE 216
Query: 149 VVV 151
V
Sbjct: 217 VRP 219
>gi|313650479|gb|EFS14886.1| flagella basal body P-ring formation protein flgA [Shigella
flexneri 2a str. 2457T]
gi|332761415|gb|EGJ91699.1| flagella basal body P-ring formation protein flgA [Shigella
flexneri K-671]
gi|332767677|gb|EGJ97870.1| flagella basal body P-ring formation protein FlgA [Shigella
flexneri 2930-71]
gi|333019308|gb|EGK38591.1| flagella basal body P-ring formation protein flgA [Shigella
flexneri K-304]
Length = 156
Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 24 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 83
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
PD I L+ + + + G +V +I + + + G AL++A++ V+ + + +V
Sbjct: 84 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR-MVSEQVV 142
Query: 138 SGSVVDTGTVRVVV 151
SG V G + + +
Sbjct: 143 SGVVDADGNILINL 156
>gi|260466618|ref|ZP_05812806.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium
opportunistum WSM2075]
gi|259029624|gb|EEW30912.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium
opportunistum WSM2075]
Length = 182
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQ-VTNSNIRGNYAHSIKDVVGLVTR 73
+ + +V ++P+ VI GE + + LK++ + + A +++ G V +
Sbjct: 44 ATQIASNQAVGEVVLIPNRVIYPGETIELTALKQVTLIPGKHKPEAMATVAEELQGKVAK 103
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R LLP IP + + +++ +GA V++ G +TIS + L S GD+I V+N D+
Sbjct: 104 RTLLPGRYIPSTAIRDAWLVEQGAAVQVFFISGGLTISATAVTLQPGSAGDLIKVRNSDS 163
Query: 134 GVMVSGSVVDTGTVRVVV 151
G ++SG+V+ GT++V
Sbjct: 164 GKILSGTVMADGTIQVSA 181
>gi|255264087|ref|ZP_05343429.1| flagella basal body P-ring formation protein FlgA [Thalassiobium
sp. R2A62]
gi|255106422|gb|EET49096.1| flagella basal body P-ring formation protein FlgA [Thalassiobium
sp. R2A62]
Length = 137
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
++SL L A V V+ S I ++ S + A VVG+ +
Sbjct: 4 LISLLFLAAPVSAETVLASRTIRPQTIIAPSDIVLHSANTEW----AADHPDLVVGMEAK 59
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
L I + + P + R + I + G +T+ T +LS GD I V N+ +
Sbjct: 60 VALYAGRPIRVEDVGPPATVERNQIILITFSNGGLTMKTEARSLSRGGPGDRIRVMNLAS 119
Query: 134 GVMVSGSVVDTGTVRV 149
+S ++ GTV V
Sbjct: 120 RATISARILTDGTVSV 135
>gi|254292904|ref|YP_003058927.1| flagella basal body P-ring formation protein FlgA [Hirschia baltica
ATCC 49814]
gi|254041435|gb|ACT58230.1| flagella basal body P-ring formation protein FlgA [Hirschia baltica
ATCC 49814]
Length = 249
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 34 VINAGEVLNESRLKEMQVTNSNIRGNYAHSI-KDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
++ G+V++ L + + +R ++ ++VG +R + +S +H P +
Sbjct: 130 DMSRGDVVSAEDLIWIPAPENRLRPTGTPNLKSNIVGKELKRSVRAQTAFRISDVHTPAL 189
Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
I +G V + +G + +S G AL DA+ I V N + + V G RV+
Sbjct: 190 IRKGDPVTLTYLKGALRLSVDGKALMDAAQDAPIRVLNNYSKRTIDAIVSGAGEARVL 247
>gi|319944139|ref|ZP_08018417.1| flagella basal body P-ring formation protein FlgA [Lautropia
mirabilis ATCC 51599]
gi|319742633|gb|EFV95042.1| flagella basal body P-ring formation protein FlgA [Lautropia
mirabilis ATCC 51599]
Length = 312
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 2/131 (1%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
+L V G A+V + AG V + +V + + G +R L
Sbjct: 182 NLQLHVEGPALVARQQLAAGSVPQPADFSVQRVDWTRSPTPPLPIDTRLGGQELQRALAA 241
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ L I G V I I+T IAL+ A G I V+ G ++S
Sbjct: 242 GQSLHADHLRPAPSIRSGEVVAAIAEGDGFRIATDAIALASAGEGQSIRVRTPG-GKVLS 300
Query: 139 GSVVDTGTVRV 149
G V TV++
Sbjct: 301 GLVEG-KTVKI 310
>gi|319781680|ref|YP_004141156.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317167568|gb|ADV11106.1| flagella basal body P-ring formation protein FlgA [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 175
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNI-RGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
++PS VI GE +N + LK++ + A +++ G V +R LLP IP +
Sbjct: 50 VLIPSRVIYPGETINLAALKQVTLVVGKHKPEAVATRAEELDGKVAKRTLLPGRYIPSAA 109
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ +++ +GA V+I G +TIS + L + GD++ V+NID+G ++SG+V+ GT
Sbjct: 110 IREAWLVEQGASVQIFFIAGGLTISATAVTLQPGAAGDLVKVRNIDSGKILSGTVMADGT 169
Query: 147 VRVVV 151
++V
Sbjct: 170 IQVSA 174
>gi|126463745|ref|YP_001044859.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter
sphaeroides ATCC 17029]
gi|126105409|gb|ABN78087.1| SAF domain [Rhodobacter sphaeroides ATCC 17029]
Length = 139
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 45/123 (36%), Gaps = 4/123 (3%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + + A +L L + +G R L + +
Sbjct: 17 ETVVAARTVRALSILGPEDLALAPQDM----PGALAELSQALGQEARVTLYAGRPVRAAD 72
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
L P +I R V + G + I G ALS +GD I V N+ + VSG + + G
Sbjct: 73 LGPPAIIDRNQLVPLSYRLGALEIRAEGRALSRGGVGDEIRVMNLSSRTTVSGRIAEDGA 132
Query: 147 VRV 149
V V
Sbjct: 133 VHV 135
>gi|254459586|ref|ZP_05073002.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales
bacterium HTCC2083]
gi|206676175|gb|EDZ40662.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae
bacterium HTCC2083]
Length = 245
Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
AV + +N G+ L S ++ + + S VVG V + L P +
Sbjct: 117 AEAVYLKLPMNKGDRLKLSDVELRPIE-RLSSESVYASPDQVVGRVLGQSLTPSIAVMPR 175
Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
L R + + + I + +G + + + G+AL +GD I V+N+ + ++ G ++
Sbjct: 176 HLAREWSVQEEDILSIYIVRGGIEVVSTGVALQPGQLGDTIHVENLSSETVLIGRIIGEK 235
Query: 146 TVRVVVK 152
V ++ K
Sbjct: 236 KVEIIAK 242
>gi|23008124|ref|ZP_00049700.1| COG1261: Flagellar basal body P-ring biosynthesis protein
[Magnetospirillum magnetotacticum MS-1]
Length = 158
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHA--VVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYA 61
R LL L ++ G VP+V I G+ + E+ L+ + R
Sbjct: 8 RGLLIACLAAGPAHAVEGMAGGELMLPVPTVTIYPGDTIKETMLRMQAYPATYRARTAVI 67
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+ + G RR+LLP +P++ + P ++SRG ++I + + I+ G L +
Sbjct: 68 DASAAIAGRTARRMLLPGEPVPVNAVDDPRLVSRGTPTQMIFEENGLVITAIGAPLQNGG 127
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
+G+ I V+N DT +V G+V+ G +R+ +
Sbjct: 128 LGETIRVRNTDTNRIVLGTVMADGRIRIGAQ 158
>gi|92116935|ref|YP_576664.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrobacter
hamburgensis X14]
gi|91799829|gb|ABE62204.1| flagellar protein FlgA [Nitrobacter hamburgensis X14]
Length = 373
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 1/138 (0%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ A A V + ++ +L S + + + + + A + V+G+ R
Sbjct: 196 ARLRFTGTAVETVEAAVLARDVDRNSLLKFSDVVMERRPKAEVGNDAA-NRDHVIGMQAR 254
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + + L +P ++ R V +I + ++ G A + GDV++ N+ +
Sbjct: 255 RQMRAGQALRRADLTKPDLVQRDQAVTLIYQAAGIYLTVRGKATESGTEGDVVSALNLQS 314
Query: 134 GVMVSGSVVDTGTVRVVV 151
VSG VV G V V
Sbjct: 315 KRTVSGVVVGRGQVSVSP 332
>gi|332558459|ref|ZP_08412781.1| SAF domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|332276171|gb|EGJ21486.1| SAF domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 222
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 47/123 (38%), Gaps = 8/123 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
V + G V+ L ++ D++G + L + L
Sbjct: 105 VALIRPLARGSVIAAEDLASGPLSARWH--------ADLIGRRLKVALAAGQPVLPRHLE 156
Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
++++RG V + + G + + AL D ++GD++ V+N+ +G + +V
Sbjct: 157 PDWLVTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVEVRNLSSGATLRATVTARNLAE 216
Query: 149 VVV 151
V
Sbjct: 217 VRP 219
>gi|126462435|ref|YP_001043549.1| SAF domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
gi|126104099|gb|ABN76777.1| SAF domain [Rhodobacter sphaeroides ATCC 17029]
Length = 220
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 8/123 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
V + G V+ L + D++G + L P + L
Sbjct: 103 VALIRPLARGSVIAAEDLASGPESARWH--------ADLIGRRLKVALAPGQPVLPRHLE 154
Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
++++RG V + + G + + AL D ++GD++ V+N+ +G + +V
Sbjct: 155 PDWLVTRGGPVALRVAAGPIEVLAPAEALEDGALGDLVEVRNLSSGATLRATVTARNLAE 214
Query: 149 VVV 151
V
Sbjct: 215 VRP 217
>gi|329297214|ref|ZP_08254550.1| flagella basal body P-ring formation protein FlgA [Plautia stali
symbiont]
Length = 170
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
L V G +V + + G ++ + + + S ++ + R + P
Sbjct: 45 LQVQVTGEYLVANRQLARGSNVSANDFRL-----DTLPARALLSSSNLADAIALRDIAPG 99
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
+ ++L +P+ + G V +I + S+ G AL++AS + V+ + G++VSG
Sbjct: 100 QPVTATMLRQPWRVKAGQNVMVIASGNGFNASSEGRALNNASAAQTVRVR-MSNGLVVSG 158
Query: 140 SVVDTGTVRVVV 151
V + G + + +
Sbjct: 159 RVSEDGNILISL 170
>gi|260222463|emb|CBA32052.1| hypothetical protein Csp_D30190 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 245
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 5/151 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
M CV + +++ + +G A V +N+G ++ES + +V + +
Sbjct: 100 MRCVDGISRWNV----TLPVTVRAMGEAWVVRNQVNSGANISESDVTRGEVDWAEEQSPV 155
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+G R L + ++ V GA V+I+ IS+ ALS
Sbjct: 156 LADKTAWLGQTASRTLTTGQAMRQGMVRPAQVFQAGASVKIVAQGPGFQISSEAQALSAG 215
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
IG V+ +D G + SG+V+D TV++ +
Sbjct: 216 VIGQQARVR-MDNGRVASGTVLDMRTVKIDL 245
>gi|310816832|ref|YP_003964796.1| flagella basal body P-ring formation protein FlgA
[Ketogulonicigenium vulgare Y25]
gi|308755567|gb|ADO43496.1| flagella basal body P-ring formation protein FlgA
[Ketogulonicigenium vulgare Y25]
Length = 138
Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 4/129 (3%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+ VV + A ++ L +++GL R + +
Sbjct: 14 TAQADYVVAQRNLPANGIITADLLGLRPGEV----PGAITDPSEIIGLEARTPIYAGRPL 69
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
S +P ++ R + + T+G +TI G AL A GD+I V N+ + + +
Sbjct: 70 QASQFGQPAIVQRNQVIAMQFTRGALTIMAEGRALERAGPGDLIRVMNLQSRTTIMARIG 129
Query: 143 DTGTVRVVV 151
GT V
Sbjct: 130 VEGTAYVTP 138
>gi|256830175|ref|YP_003158903.1| flagella basal body P-ring formation protein FlgA [Desulfomicrobium
baculatum DSM 4028]
gi|256579351|gb|ACU90487.1| flagella basal body P-ring formation protein FlgA [Desulfomicrobium
baculatum DSM 4028]
Length = 316
Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 55/135 (40%), Gaps = 2/135 (1%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
++FA V + V+N G++L + + + + +
Sbjct: 183 SFTGTVFADVWKTVPCAARVLNRGDMLEPGLVGFARKNLAYMAREPWDGRNLPL--RMTA 240
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ VI + V+++G + +I + ++ +L D IG+ I V+N+ +
Sbjct: 241 AVGEGQVISADAVEFIPVVAKGQILTLIYAGQTLKLTVPVESLEDGGIGNTIRVRNMQSR 300
Query: 135 VMVSGSVVDTGTVRV 149
+V+ VVD TVRV
Sbjct: 301 RVVAAQVVDAETVRV 315
>gi|218528667|ref|YP_002419483.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
chloromethanicum CM4]
gi|218520970|gb|ACK81555.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
chloromethanicum CM4]
Length = 164
Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 4 VRFLLFFSLYV----LSLDSLFASVIGHA----VVPSVVINAGEVLNESRLKEMQVTNS- 54
VR L+ SL + + +A VP+V I G+ + ES L+ +
Sbjct: 7 VRGLVLASLAAGSAQPIAPAQAVEGMANAELMLPVPTVTIYPGDTIKESMLRMQAYPATY 66
Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
R + + G V RR+LLP +P++ + P ++SRGA ++I + + I+ G
Sbjct: 67 RARTAVIDASAAIAGRVARRMLLPGEPVPVNAVDDPRLVSRGAPTQMIFEENGLVITAVG 126
Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
L + +G+ I V+N DT ++ G+V+ G +R+ +
Sbjct: 127 APLQNGGLGETIRVRNTDTNRIILGTVMADGRIRIGAQ 164
>gi|159045793|ref|YP_001534587.1| flagellar basal body P-ring biosynthesis protein FlgA
[Dinoroseobacter shibae DFL 12]
gi|157913553|gb|ABV94986.1| flagellar basal body P-ring biosynthesis protein FlgA
[Dinoroseobacter shibae DFL 12]
Length = 141
Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 56/145 (38%), Gaps = 9/145 (6%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
R+L+ SL VL A +V + I A +L L +
Sbjct: 3 RWLIL-SLAVLMGVPAAA----ETLVAARTIRAQAILTAEDLNLTPGST----PGALSRP 53
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
++ +GL +R +L I + P ++ R V ++ M I+T G AL A +G+
Sbjct: 54 EEAIGLESRVILYAGRPILADQVGPPALVERNELVSLVYATPFMRIATEGRALGRAGLGE 113
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
+ V NI + V V G V
Sbjct: 114 SLRVLNISSKTTVRARVTGPGQAIV 138
>gi|326623713|gb|EGE30058.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Dublin str. 3246]
Length = 156
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + + G L + + + + I+ + V+ R L
Sbjct: 24 LQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 83
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +V
Sbjct: 84 PGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIV 142
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 143 SGTVDSDGNILINL 156
>gi|58039416|ref|YP_191380.1| flagellar basal body P-ring biosynthesis protein FlgA
[Gluconobacter oxydans 621H]
gi|58001830|gb|AAW60724.1| Flagella basal body P ring formation protein FlgA [Gluconobacter
oxydans 621H]
Length = 330
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 61/137 (44%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
S A++ AV ++ G+ + + V I + S +D VGL R
Sbjct: 173 AFNVSGTATMEVRAVTLRHAMHLGQPILPEDVTMTFVRIGLIPDDALQSPEDAVGLEARG 232
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
VL V+ +S L P ++ RG+ V + ++ ++ +G L GD + V N +
Sbjct: 233 VLAAGQVLSVSELAHPQLVHRGSPVVATFSGPSLHLTVSGTVLEAGGKGDTVHVYNASSR 292
Query: 135 VMVSGSVVDTGTVRVVV 151
++++G VVD V V+
Sbjct: 293 MVLTGRVVDRTEVEVIP 309
>gi|167626151|ref|YP_001676445.1| SAF domain-containing protein [Shewanella halifaxensis HAW-EB4]
gi|167356173|gb|ABZ78786.1| SAF domain [Shewanella halifaxensis HAW-EB4]
Length = 248
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 54/139 (38%), Gaps = 4/139 (2%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+SLYV + S+ + V + V+ GE + + + V + + ++VG
Sbjct: 111 WSLYVRASVSVSVKI----PVANRVLKRGEHILAADIDWKVVKLRPSDRDLVTGLDEIVG 166
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
R + I L P ++ G +V I + G AL G I V+
Sbjct: 167 RQVVRKVRRYQAIKAVQLSAPQWVNIGDRVIIEARSNGFYANMPGEALEGGGEGVAIRVR 226
Query: 130 NIDTGVMVSGSVVDTGTVR 148
N+ +G ++S + G V
Sbjct: 227 NLSSGKVISAYPIAKGRVE 245
>gi|126730133|ref|ZP_01745945.1| flagellar basal-body P-ring formation protein FlgA [Sagittula
stellata E-37]
gi|126709513|gb|EBA08567.1| flagellar basal-body P-ring formation protein FlgA [Sagittula
stellata E-37]
Length = 138
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
VV + I ++++ ++ Q T S S+ DV+G +R V+ P +
Sbjct: 15 AQAETVVATQTIRPQQIISPDAVRMDQATIS----GAYVSLDDVIGQESRYVIYPGRPLM 70
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
+ + P ++ R V +I G + I G AL + G+ I V N D+ ++ G++
Sbjct: 71 IGAVGEPALVDRNQIVELIYAHGGLRILAEGRALDRGAEGERIRVMNSDSRTVLFGTIQP 130
Query: 144 TGTVRV 149
G+V V
Sbjct: 131 DGSVLV 136
>gi|254488219|ref|ZP_05101424.1| flagella basal body P-ring formation protein FlgA [Roseobacter sp.
GAI101]
gi|214045088|gb|EEB85726.1| flagella basal body P-ring formation protein FlgA [Roseobacter sp.
GAI101]
Length = 123
Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VVP+ + A ++ E + V+ + + ++DV+G R VL I L
Sbjct: 1 MAQVVVPTRTVRADAIITEMDVMIGNVSAA----DGFDRLRDVIGQEARVVLYAGRPIML 56
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
+ P ++ R V + + I+T G AL +GD I V N+ + + G V
Sbjct: 57 DQIGPPAIVDRNQIVSLFFEGRGLRIATEGRALERGGVGDNIRVMNLASRATLFGQVQQD 116
Query: 145 GTVRVV 150
GT+++
Sbjct: 117 GTIQIR 122
>gi|254499119|ref|ZP_05111809.1| truncated Flageller protein FlgA [Legionella drancourtii LLAP12]
gi|254351658|gb|EET10503.1| truncated Flageller protein FlgA [Legionella drancourtii LLAP12]
Length = 288
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 44/137 (32%), Gaps = 2/137 (1%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V I +L+ + + + ++ V
Sbjct: 153 RSIPVWFAVKAYQAVFVAQHKIKQHTLLHSEDIALQRRNIAGLKNPPLTQFPQRVW--LT 210
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R + + ++ + + +G KV + + Q ++I +A SDA +G + ++N T
Sbjct: 211 RSINKNQILTHDDVRTTPEVMQGHKVNVNVRQHGISIMMEALAQSDAYLGQAVRMQNPQT 270
Query: 134 GVMVSGSVVDTGTVRVV 150
+V +V
Sbjct: 271 NKYFVATVTGKNQAEIV 287
>gi|146277660|ref|YP_001167819.1| flagellar basal body P-ring biosynthesis protein-like protein
[Rhodobacter sphaeroides ATCC 17025]
gi|145555901|gb|ABP70514.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Rhodobacter sphaeroides ATCC 17025]
Length = 225
Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
V + + G L L + R + ++G + L P I L
Sbjct: 105 VTLARPVARGSALAAEDLAPGDGSAEQKRWQ-----QALIGRRLKVALAPGQPILPRHLE 159
Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
++++RG V + + G + + TAG AL+DA++GD++ V+N+ +G ++ +V
Sbjct: 160 PDWLVTRGGPVALRVAVGPIEVLTAGEALADAALGDLVEVRNLSSGAILRATVTARNMAE 219
Query: 149 VVV 151
+
Sbjct: 220 LRP 222
>gi|84502380|ref|ZP_01000516.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola
batsensis HTCC2597]
gi|84389192|gb|EAQ01989.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola
batsensis HTCC2597]
Length = 222
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 55/134 (41%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
A VP + GE + E L +++ + I D+VG+ +R+
Sbjct: 87 VRLEGLAIATLDVPVPVARMLPGERIGEEDLGAVKLPLARIGAFTVTDPADLVGMQVKRL 146
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
L + + +P +I RG ++ I G + +S G AL A G I + N+ +
Sbjct: 147 LTQGRPVMTQSVIKPLIIDRGDRISIRYDDGLLALSAPGKALDAAHKGQEIRIVNLASNT 206
Query: 136 MVSGSVVDTGTVRV 149
++G V G V V
Sbjct: 207 SLTGVAVGRGIVEV 220
>gi|306846277|ref|ZP_07478838.1| flagella basal body P-ring formation protein FlgA [Brucella sp.
BO1]
gi|306273272|gb|EFM55141.1| flagella basal body P-ring formation protein FlgA [Brucella sp.
BO1]
Length = 160
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGN 59
+ R L + + A+ VVPS + G++++++ L E Q +
Sbjct: 8 LQTTRLALAGGFLLAATAGAGAADRIAFVVPSATVYPGQIVSDTALLEKQFFINAPAAAQ 67
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
Y S+ VG V R+ LLP I +S L P +++RG V ++ T G +TI+ G L
Sbjct: 68 YVLSLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGVPVPLVFTAGTLTITAMGTPLES 127
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
+ GD I V+N+D+G++VSG+V+ G ++V ++
Sbjct: 128 GAAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 160
>gi|332527905|ref|ZP_08403941.1| flagella basal body P-ring formation protein FlgA [Rubrivivax
benzoatilyticus JA2]
gi|332112481|gb|EGJ12274.1| flagella basal body P-ring formation protein FlgA [Rubrivivax
benzoatilyticus JA2]
Length = 185
Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 5/149 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C + +++++ V G VV + G VL +L +V +
Sbjct: 40 LRCRDGAVPWNVFLPITV----EVWGPGVVAVTALAPGTVLAPGQLALGEVDWAAAATPP 95
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
S++ + G R L P + L L + G V ++ +ST G AL
Sbjct: 96 LASVQALEGRTLARPLAPGQALRLDALKPREWFAAGEVVSVVARGDGYAVSTRGEALMRG 155
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G ++ V+ + G +V+G G V V
Sbjct: 156 VEGRLVRVR-TEAGRIVTGWPTAEGRVDV 183
>gi|326404068|ref|YP_004284150.1| flagellar basal-body ring component protein [Acidiphilium
multivorum AIU301]
gi|325050930|dbj|BAJ81268.1| flagellar basal-body ring component protein [Acidiphilium
multivorum AIU301]
Length = 332
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 54/137 (39%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
S A+ +V + GE++ + +K V + + D +G+ R
Sbjct: 174 SFELSGIAAQAERVIVARRTLEPGEIVTINDVKMSWVARAALPQGTLTQAADALGMQVDR 233
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ + V+ + +++RGA V + + + ++ G+AL+ G VI V N +
Sbjct: 234 RIAAGTPLSKRVVAQVMMVNRGATVNLAVEMPGLEVTAEGVALAAGPKGAVIPVLNPSSH 293
Query: 135 VMVSGSVVDTGTVRVVV 151
+V + V+
Sbjct: 294 EVVQAVIDGENHAHVIP 310
>gi|226944488|ref|YP_002799561.1| flagellar protein FlgA [Azotobacter vinelandii DJ]
gi|226719415|gb|ACO78586.1| Flagellar protein FlgA [Azotobacter vinelandii DJ]
Length = 231
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 1/131 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++G + I GE + L + + N A + +++G+ R +
Sbjct: 99 LQASVGILGEYAIARRAIEPGETVEADMLAMRRGRLERLPRNAAITTDEILGMQATRAIA 158
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
S L P +I R A+V + IS AL ++ ++ V+ + G ++
Sbjct: 159 EGSTFQRSALRAPELIERNAQVVLEARGPGFVISRKATALDSGALDSLVRVR-TEAGEIL 217
Query: 138 SGSVVDTGTVR 148
G VV ++
Sbjct: 218 RGRVVGRNRLQ 228
>gi|319405402|emb|CBI79021.1| Flagella basal body P-ring formation protein FlgA [Bartonella sp.
AR 15-3]
Length = 152
Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTN-SNIRGNYAHSIKDVVGLVTRRV 75
L + +A I +VP I AG+ +++ L E S+ Y +K ++ V +R
Sbjct: 18 LTAAYADRI-SFLVPDKSIYAGQRISDIGLSEKHFFIKSDAASLYVMDMKQILHKVAKRT 76
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
L I LS L P ++ RG ++I N+ I+ G+ L S GDVI V+N D+G
Sbjct: 77 LTAGRPISLSSLGDPVLVERGQATKLIFQAHNLQITALGVVLQSGSSGDVIRVRNSDSGR 136
Query: 136 MVSGSVVDTGTVRV 149
+V+G+V+ G VRV
Sbjct: 137 VVTGTVLQNGDVRV 150
>gi|323139655|ref|ZP_08074697.1| flagella basal body P-ring formation protein FlgA [Methylocystis
sp. ATCC 49242]
gi|322395087|gb|EFX97646.1| flagella basal body P-ring formation protein FlgA [Methylocystis
sp. ATCC 49242]
Length = 159
Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIG-HAVVPSVVINAGEVLNESRLKEMQVTN-SNIRGNYA 61
VR FF + ++L + A VP V I G+ + + L+E +
Sbjct: 9 VRSFTFFVVASMTLTLVAARAQESQVPVPRVTIYPGDQITDQVLEEKNYRLPNGADALVF 68
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
S +VG V RR LLP IP + P+V+ GA+VRI+ ++G M I+T G+A +
Sbjct: 69 LSRTGLVGKVARRTLLPGQPIPTIAVDNPHVVKVGAQVRIVFSEGGMQITTYGVAQQSGA 128
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+GDVI V+N ++G+ +SG V G++ V
Sbjct: 129 VGDVIRVRNQESGLFISGRVQSDGSILV 156
>gi|319406977|emb|CBI80614.1| Flagella basal body P-ring formation protein FlgA [Bartonella sp.
1-1C]
Length = 152
Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTN-SNIRGNYAHSIKDVVGLVTRRVLL 77
+ +A IG +VP I AG+ +++ L E S+ Y +K ++ V +R L
Sbjct: 20 AAYADRIG-FLVPDKSIYAGQRISDIGLSEKHFFIKSDAVSLYVTDMKQILHKVAKRTLT 78
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
I LS L P ++ RG ++I N+ I+ G+ L S GDVI V+N D+G +V
Sbjct: 79 AGRPISLSSLGDPVLVERGQATKLIFQTHNLQITALGVVLQSGSSGDVIRVRNSDSGRVV 138
Query: 138 SGSVVDTGTVRV 149
+G+V+ G VRV
Sbjct: 139 TGTVLQNGDVRV 150
>gi|163850064|ref|YP_001638107.1| FlgA, flagellar basal-body P-ring formation protein
[Methylobacterium extorquens PA1]
gi|240137198|ref|YP_002961667.1| Flagella basal body p ring formation protein FlgA [Methylobacterium
extorquens AM1]
gi|254559210|ref|YP_003066305.1| flagella basal body p ring formation protein FlgA [Methylobacterium
extorquens DM4]
gi|163661669|gb|ABY29036.1| FlgA, flagellar basal-body P-ring formation protein
[Methylobacterium extorquens PA1]
gi|240007164|gb|ACS38390.1| Flagella basal body p ring formation protein FlgA [Methylobacterium
extorquens AM1]
gi|254266488|emb|CAX22252.1| Flagella basal body p ring formation protein FlgA [Methylobacterium
extorquens DM4]
Length = 164
Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 4 VRFLLFFSLYV----LSLDSLFASVIGHA----VVPSVVINAGEVLNESRLKEMQVTNS- 54
VR L+ +L + + +A VP+V I G+ + ES L+ +
Sbjct: 7 VRGLVLAALAAGSAQPIAPAQAVEGMANAELMLPVPTVTIYPGDTIKESMLRMQAYPATY 66
Query: 55 NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
R + + G V RR+LLP +P++ + P ++SRGA ++I + + I+ G
Sbjct: 67 RARTAVIDASAAIAGRVARRMLLPGEPVPVNAVDDPRLVSRGAPTQMIFEENGLVITAVG 126
Query: 115 IALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
L + +G+ I V+N DT ++ G+V+ G +R+ +
Sbjct: 127 APLQNGGLGETIRVRNTDTNRIILGTVMADGRIRIGAQ 164
>gi|302878272|ref|YP_003846836.1| flagella basal body P-ring formation protein FlgA [Gallionella
capsiferriformans ES-2]
gi|302581061|gb|ADL55072.1| flagella basal body P-ring formation protein FlgA [Gallionella
capsiferriformans ES-2]
Length = 225
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+L + + +V + + G+++ E+ L +Q + G +VG V R
Sbjct: 92 STLIPVQIKITRELLVSAHALTLGQIVRETDLARLQTETTLNSG--ITDASLIVGKVLRY 149
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ +++ +L PY I +G V + + T+S++G+AL++AS G+ + + +G
Sbjct: 150 SVAAGYILREDMLRPPYSIKQGQTVNLSIQANGFTLSSSGVALNNASEGETVQAR-TSSG 208
Query: 135 VMVSGSVVDTGTVRV 149
++SG+ G + +
Sbjct: 209 RVISGTASADGVILI 223
>gi|221640824|ref|YP_002527086.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhodobacter
sphaeroides KD131]
gi|221161605|gb|ACM02585.1| SAF domain precursor [Rhodobacter sphaeroides KD131]
Length = 148
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 4/120 (3%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + + A +L L + +G R L + +
Sbjct: 18 ETVVAARTVRALSILGPEDLALAPQDM----PGALAELSQALGQEARVTLYAGRPVRAAD 73
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
L P +I R V + G + I G ALS +GD I V N+ + VSG + + G
Sbjct: 74 LGPPAIIDRNQLVPLSYRLGALEIRAEGRALSRGGVGDEIRVMNLSSRTTVSGRIAEVGR 133
>gi|114765243|ref|ZP_01444375.1| flagellar basal-body P-ring formation protein FlgA [Pelagibaca
bermudensis HTCC2601]
gi|114542378|gb|EAU45406.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
HTCC2601]
Length = 220
Score = 90.0 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 60/137 (43%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ A VP+ + GE+++ + +K + + + + + + G+ R
Sbjct: 83 ITHRLQGLAVAKLSLPVPTRRLMPGEIVSAADIKIVDLPIARVGVFTLTDAEMLEGMQVR 142
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R+L + + P VI RG KV I+ G + ++ G AL+DA G + + N+ +
Sbjct: 143 RMLAQGRPVMRQSVMEPLVIGRGDKVNILYDDGRLVVTAPGRALTDAHRGQDVRIVNLVS 202
Query: 134 GVMVSGSVVDTGTVRVV 150
++ + G V V+
Sbjct: 203 NNALTAVAREEGLVEVI 219
>gi|167645395|ref|YP_001683058.1| flagellar basal body P-ring formation protein FlgA [Caulobacter sp.
K31]
gi|167347825|gb|ABZ70560.1| flagellar basal body P-ring formation protein FlgA [Caulobacter sp.
K31]
Length = 247
Score = 90.0 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ + + AGE++ L ++V + + D++G+ +R L L
Sbjct: 107 EVLAYARSLAAGEIVQPEDLVWVKV--AASPSDSPRDADDLIGMTAKRPLRQGATASLRD 164
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ P VI G V + G + +S G A+++ ++G+ + V+N + ++ V G+
Sbjct: 165 VSTPQVIKAGDIVAVTYEDGGVALSLQGKAMANGAVGESLMVQNTASKKIIETVVTGPGS 224
Query: 147 VRVVVK 152
V +
Sbjct: 225 TAVGPQ 230
>gi|153011523|ref|YP_001372737.1| flagellar basal body P-ring biosynthesis protein FlgA [Ochrobactrum
anthropi ATCC 49188]
gi|151563411|gb|ABS16908.1| FlgA, flagellar basal-body P-ring formation protein [Ochrobactrum
anthropi ATCC 49188]
Length = 160
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHS 63
R +L + ++ A+ VVPS + G++++++ L E Q + Y S
Sbjct: 12 RLVLAGGFLLAAMAGASAADRIAFVVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLS 71
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
G V R+ LLP I +S L P +++RG ++ T G +TI+ G L ++G
Sbjct: 72 PDQAAGKVARKTLLPGKPILVSALGEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAVG 131
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
D I V+N+D+G++VSG+V+ G ++V ++
Sbjct: 132 DFIKVRNVDSGIIVSGTVLANGRIQVGMQ 160
>gi|85706166|ref|ZP_01037261.1| putative flagellar basal-body P-ring formation protein FlgA
[Roseovarius sp. 217]
gi|85669330|gb|EAQ24196.1| putative flagellar basal-body P-ring formation protein FlgA
[Roseovarius sp. 217]
Length = 139
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 10/146 (6%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+RFL F + +++ + VV + I A EVL + L G +
Sbjct: 2 MRFLTSFLMLIIAN-----PALADMVVATRTIRAQEVLGPADLLLKPGE-----GISDVT 51
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ D++G R L P I + P VI R V ++ + I T G +LS A +G
Sbjct: 52 LHDLIGQEVRVALYPGRQIRAVDVGPPTVIERNQIVPLVYAHSGLRIETEGRSLSRAGVG 111
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
D + V N+ + VSG V TG + V
Sbjct: 112 DYVRVMNLASRATVSGRVTQTGHILV 137
>gi|213616006|ref|ZP_03371832.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 135
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + + G L + + + + I+ + V+ R L
Sbjct: 3 LQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 62
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P + L+++ + + + G +V++I +++ G A+++A++ V+ + +G +V
Sbjct: 63 PGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIV 121
Query: 138 SGSVVDTGTVRVVV 151
SG+V G + + +
Sbjct: 122 SGTVDSDGNILINL 135
>gi|255322186|ref|ZP_05363332.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter showae RM3277]
gi|255300559|gb|EET79830.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter showae RM3277]
Length = 268
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 2/129 (1%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
S + + + ++L + V + + L T++ + V
Sbjct: 142 VSAKMPVLRATKPLTTRQMLGIDDFAKDWVELDEFSPDMMSEAPNAR-LATKQNIKSGEV 200
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
+ L +I +G +V +L+ G ++I AL + ++G+ I VKN D + S +
Sbjct: 201 LRLRQFTPLPLIKKGERVNAVLSDGALSIIVEVTALENGNLGETIKVKNND-KKVFSAQI 259
Query: 142 VDTGTVRVV 150
V V +
Sbjct: 260 VSKKQVMIR 268
>gi|319898638|ref|YP_004158731.1| flagella basal body P-ring formation protein FlgA [Bartonella
clarridgeiae 73]
gi|319402602|emb|CBI76147.1| Flagella basal body P-ring formation protein FlgA [Bartonella
clarridgeiae 73]
Length = 152
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTN-SNIRGNYAHSIKDVVGLVTRRVLL 77
+ +A IG +VP I AG+ +++ L E S+ Y +K ++ V +R L
Sbjct: 20 TAYADRIG-FLVPDKSIYAGQRISDIGLSERHFFIKSDAASLYVTDMKQILHKVAKRTLT 78
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
I LS L P ++ RG ++I N+ I+ G+ L S GDVI V+N D+G +V
Sbjct: 79 AGRPIALSSLGDPVLVERGQATKLIFQTHNLKITALGVVLQSGSSGDVIRVRNSDSGRVV 138
Query: 138 SGSVVDTGTVRV 149
+G+V+ G VRV
Sbjct: 139 TGTVLQNGDVRV 150
>gi|170741837|ref|YP_001770492.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
sp. 4-46]
gi|168196111|gb|ACA18058.1| flagella basal body P-ring formation protein FlgA [Methylobacterium
sp. 4-46]
Length = 176
Score = 89.2 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
VP+V I G+++ E+ L+E + R + +VG V RR LLP +P++ +
Sbjct: 51 PVPAVTIYPGDMIKETMLREQSFPPTFRARAAVIDAPLAIVGRVARRTLLPGEPVPVNAV 110
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
P ++SRG +I + + I+T G L + +G+VI V+N DTG +V G V G +
Sbjct: 111 DDPRLVSRGTPTTMIFEENGLIITTLGTPLQNGGLGEVIRVRNTDTGRIVVGVVQGDGRI 170
Query: 148 RV 149
R+
Sbjct: 171 RI 172
>gi|188579868|ref|YP_001923313.1| FlgA, flagellar basal-body P-ring formation protein
[Methylobacterium populi BJ001]
gi|179343366|gb|ACB78778.1| FlgA, flagellar basal-body P-ring formation protein
[Methylobacterium populi BJ001]
Length = 162
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
VP+V I G+ + +S L+ + R + + G RR+LLP +P++ +
Sbjct: 38 PVPTVTIYPGDTIKDSMLRMQAYPATYRARTAVIDASAAIAGRTARRMLLPGEPVPVNAV 97
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
P ++SRGA ++I + + I+ G L + +G+ I V+N DT +V G+V G +
Sbjct: 98 DDPRLVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIVLGTVTADGRI 157
Query: 148 RVVVK 152
R+ +
Sbjct: 158 RIGAQ 162
>gi|320354343|ref|YP_004195682.1| flagella basal body P-ring formation protein FlgA [Desulfobulbus
propionicus DSM 2032]
gi|320122845|gb|ADW18391.1| flagella basal body P-ring formation protein FlgA [Desulfobulbus
propionicus DSM 2032]
Length = 278
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 35 INAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS 94
+N G+V+N+S + MQ + Y S + ++G+ R + V+ + + P ++
Sbjct: 163 LNKGDVINDSNIAVMQQDIGGLNHPY-TSKEQLIGMQVARTVNAGTVLEQAHIAAPPIVK 221
Query: 95 RGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G V+I +G + +ST+G+A +D +G++I VKNI + ++ V G V V
Sbjct: 222 DGEMVKIFARKGALQLSTSGLAKTDGRLGEIIQVKNIGSNKLIHCRVDGPGMVSV 276
>gi|312880334|ref|ZP_07740134.1| flagella basal body P-ring formation protein FlgA [Aminomonas
paucivorans DSM 12260]
gi|310783625|gb|EFQ24023.1| flagella basal body P-ring formation protein FlgA [Aminomonas
paucivorans DSM 12260]
Length = 312
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
M V + S + VV + GE + + R
Sbjct: 157 MRSVSLNVATSEEPARFVRVVLRWYQPQVVAKSPLRKGETIRREDVFLRLGIQDTYR-LL 215
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
AHS + V G V R + + + VL R V+ G +V + G++ + G AL
Sbjct: 216 AHSFQQVEGKVLRIPVKAGVPVAMEVLVRDEVVHAGNQVVLSSVVGSVAVEAKGRALEQG 275
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
++GD I V+N+DT +VSG V+ G V ++ K
Sbjct: 276 AVGDTIRVRNLDTRQIVSGVVIGPGRVEILQK 307
>gi|295688783|ref|YP_003592476.1| flagella basal body P-ring formation protein FlgA [Caulobacter
segnis ATCC 21756]
gi|295430686|gb|ADG09858.1| flagella basal body P-ring formation protein FlgA [Caulobacter
segnis ATCC 21756]
Length = 254
Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 57/138 (41%), Gaps = 2/138 (1%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ + A + + + AGE++ L +++ + + V+GL +R
Sbjct: 103 RAGLTGAARGNVEVLAYARSMTAGEIVQPEDLVWVKM--AGAPADAPRDADAVIGLAAKR 160
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L + + V+ G + + + G +++S G A+S AS G+V AV+N +
Sbjct: 161 PLREGAAVSQRDVGAAQVVKTGDLITVTYSDGGISLSLQGKAMSAASTGEVFAVQNTASK 220
Query: 135 VMVSGSVVDTGTVRVVVK 152
++ + G V +
Sbjct: 221 KIIQAVAIGPGAAAVGPQ 238
>gi|328545504|ref|YP_004305613.1| flagellar basal body P-ring biosynthesis protein-like protein
[polymorphum gilvum SL003B-26A1]
gi|326415245|gb|ADZ72308.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Polymorphum gilvum SL003B-26A1]
Length = 154
Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG-NYAHSIKDVVGL 70
+ + S + VP V I+ G+ + L E + + R S +D+VG+
Sbjct: 14 MAASAALSGARAAGIDLPVPRVTIHPGDEIGADLLIERRFPANTTRQFAIVTSPRDLVGM 73
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
V RR LLP +PL + ++ RG R++ +G + I T AL G V+ V+N
Sbjct: 74 VARRTLLPGQPVPLGAVAPVMLVKRGEPARLVFKEGGLFIMTQVEALQSGGAGAVVRVRN 133
Query: 131 IDTGVMVSGSVVDTGTV 147
+D+GV+V+G+V G++
Sbjct: 134 VDSGVIVTGTVQADGSI 150
>gi|254720609|ref|ZP_05182420.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp.
83/13]
gi|265985649|ref|ZP_06098384.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp.
83/13]
gi|306838571|ref|ZP_07471408.1| flagella basal body P-ring formation protein FlgA [Brucella sp. NF
2653]
gi|264664241|gb|EEZ34502.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella sp.
83/13]
gi|306406357|gb|EFM62599.1| flagella basal body P-ring formation protein FlgA [Brucella sp. NF
2653]
Length = 160
Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGN 59
+ R L L + A+ VVPS + G++++++ L E Q +
Sbjct: 8 LQTTRLALAGGLLFAATAGAGAADRIAFVVPSATVYPGQIVSDTALLEKQFFINAPAAAQ 67
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
Y S+ VG V R+ LLP I +S L P +I+RG ++ T G +TI+ G L
Sbjct: 68 YVLSLDQAVGKVARKTLLPGKPILVSALGEPSLITRGVPAPLVFTAGTLTITAMGTPLES 127
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
+ GD I V+N+D+G++VSG+V+ G ++V ++
Sbjct: 128 GAAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 160
>gi|110632655|ref|YP_672863.1| flagellar protein FlgA [Mesorhizobium sp. BNC1]
gi|110283639|gb|ABG61698.1| flagellar protein FlgA [Chelativorans sp. BNC1]
Length = 157
Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDH 80
A VVP+ VI GE ++ L+EM + + A + D+ G V RR LLP
Sbjct: 26 AHAQEVVVVPTRVIYPGETVSAEALQEMMLRQPPRGAASIARTPGDLEGKVARRTLLPGR 85
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
+IPLS + PY++ +G+ V + T G +TIS + L + GD I V+N+D+G + +G
Sbjct: 86 LIPLSYVREPYLVEQGSTVTAVFTDGPLTISVLAVPLQPGAAGDFIKVRNVDSGAVFTGI 145
Query: 141 VVDTGTVRVVV 151
V+ GTV+V
Sbjct: 146 VMQDGTVKVGA 156
>gi|121602252|ref|YP_989399.1| flagellar basal body P-ring biosynthesis protein FlgA [Bartonella
bacilliformis KC583]
gi|120614429|gb|ABM45030.1| flagella basal body P-ring formation protein FlgA [Bartonella
bacilliformis KC583]
Length = 152
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTN-SNIRGNYAHSIKD 66
+FFSL +L+ + +A + +VP I G+ +++ L E S Y +K
Sbjct: 11 VFFSLCLLT--AAYADRV-SFLVPERSIYVGQRVSDVGLSEKNFIIKSEAASLYVIDMKQ 67
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
V+ V R L I L+ L P ++ RG +++I N+ I+ G+ L S GDV+
Sbjct: 68 VLNKVATRPLRAGRPIALTALGDPVLVERGQTIKLIFQSDNLQITAIGVVLQSGSSGDVV 127
Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
V+N D+G +V G+V+ G+VRV
Sbjct: 128 RVRNADSGRIVMGTVLQNGSVRV 150
>gi|148558735|ref|YP_001257214.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
ovis ATCC 25840]
gi|148370020|gb|ABQ62892.1| putative flagellar basal-body P-ring formation protein FlgA
[Brucella ovis ATCC 25840]
Length = 160
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGN 59
R L + ++ A+ VVPS + G++++++ L E Q +
Sbjct: 8 FQTARLALAGGFLLAAMAGAGAADRIAFVVPSATVYPGQIVSDTALLEKQFFINAPAATQ 67
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
Y S+ VG V R+ L P I +S L P +++RG ++ T G +TI+ G L
Sbjct: 68 YVLSLDQAVGKVARKTLFPGKPILVSALGEPSLVTRGIPAPLVFTAGTLTITAMGTPLES 127
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
GD I V+N+D+G++VSG+V+ G ++V ++
Sbjct: 128 GVAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 160
>gi|315638956|ref|ZP_07894127.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter upsaliensis JV21]
gi|315480985|gb|EFU71618.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter upsaliensis JV21]
Length = 220
Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
F + + I G+ + K + + + N S +D+ L+ + + +
Sbjct: 93 FIRANLEVLRSTRAIKRGDRIGAFDYKIVMMDFDKVPSNAL-SKEDLNNLLAKNNISKNT 151
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
++ ++ +I R +V +L + + ++L A++G+ I VK+ D G ++ G
Sbjct: 152 ILRQNMFKTTAIIKRNDQVIGVLKDKGIDVLIELVSLQSANLGERIRVKSKD-GRVMQGI 210
Query: 141 VVDTGTV 147
V+ V
Sbjct: 211 VMGKNRV 217
>gi|254460877|ref|ZP_05074293.1| flagella basal body P-ring formation protein FlgA [Rhodobacterales
bacterium HTCC2083]
gi|206677466|gb|EDZ41953.1| flagella basal body P-ring formation protein FlgA [Rhodobacteraceae
bacterium HTCC2083]
Length = 141
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
++ + + L A + + + I GEV++ + + ++ S S
Sbjct: 1 MILRAFPIALLLITSAPISAEVAIAARNIRPGEVMSVTDVMVIRGEAS----GAFKSADL 56
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
+VG + L VI S + + R V I + +++ST G AL S G I
Sbjct: 57 IVGAEAKVALYAGRVILTSQIVPAASVQRNQIVEIRFSSNGLSMSTDGRALGRGSAGQRI 116
Query: 127 AVKNIDTGVMVSGSVVDTGTVRV 149
V N+ + + G++ G+VRV
Sbjct: 117 RVMNLASKTSIFGTIQSDGSVRV 139
>gi|27381983|ref|NP_773512.1| flagellar basal body P-ring biosynthesis protein FlgA
[Bradyrhizobium japonicum USDA 110]
gi|27355153|dbj|BAC52137.1| flgA [Bradyrhizobium japonicum USDA 110]
Length = 175
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR-GNYAHSIKDVVGL 70
L VL + A+ VP+V I AGE++ + + E + + + + +VG
Sbjct: 33 LLVLVSARVAAAEEKRLPVPAVSIRAGELIRDDMITERAFAPNLLGVAQFIEGRQILVGR 92
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
+ RR LLP IP + + P+ ++RGA V++++ ++I T G A+ + G +I V+N
Sbjct: 93 MARRALLPGQPIPTNSVEDPWTVARGAMVKVVVEDSGLSIVTYGSAMQSGAAGALIPVRN 152
Query: 131 IDTGVMVSGSVVDTGTVRVV 150
DTGV++ G V GTV+VV
Sbjct: 153 TDTGVIIRGVVQPDGTVKVV 172
>gi|300938637|ref|ZP_07153366.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 21-1]
gi|300456422|gb|EFK19915.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 21-1]
Length = 219
Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 48/112 (42%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I GE L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|89056683|ref|YP_512134.1| flagellar basal body P-ring biosynthesis protein FlgA [Jannaschia
sp. CCS1]
gi|88866232|gb|ABD57109.1| flagellar basal-body P-ring formation protein FlgA [Jannaschia sp.
CCS1]
Length = 140
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 4/130 (3%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+V V+ + I ++ + + + I +G+ R L P
Sbjct: 11 ASPAVAQETVIAAGTIRGATMIGPADVAVVDGET----PGALSDIYQAIGMEARINLYPG 66
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
I L P ++ R V + G + + T G AL A+ G+ + V N+ + V+
Sbjct: 67 RPIRPGDLRAPAIVERNEIVSLRYNYGGLLVMTEGRALDRAAAGEALRVINLASRQTVTA 126
Query: 140 SVVDTGTVRV 149
+ G V V
Sbjct: 127 TATGPGLVTV 136
>gi|167576658|ref|ZP_02369532.1| flagella basal body P-ring formation protein FlgA [Burkholderia
thailandensis TXDOH]
Length = 253
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
+ + A + V + ++A E + L+ + T +++ + + +G +RR
Sbjct: 109 TKLTARAQITATIPVAARDLDARETIAAGDLRTARRTLTSLT-DTVTRADEAIGRTSRRS 167
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG- 134
L V+ +L P +I RG VRI+ G I GIA+ + + DVI V+
Sbjct: 168 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDVIRVRVGTRKD 227
Query: 135 -VMVSGSVVDTGTVRVVVK 152
+V+ V GT + +
Sbjct: 228 AKVVTVRVTGPGTAEPIAQ 246
>gi|222032825|emb|CAP75564.1| flagella basal body P-ring formation protein flgA [Escherichia coli
LF82]
gi|312945634|gb|ADR26461.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O83:H1 str. NRG 857C]
Length = 219
Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 48/112 (42%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I GE L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + I G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRIKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|23499917|ref|NP_699357.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
suis 1330]
gi|62317104|ref|YP_222957.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 1 str. 9-941]
gi|83269096|ref|YP_418387.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
melitensis biovar Abortus 2308]
gi|161620237|ref|YP_001594123.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
canis ATCC 23365]
gi|189022369|ref|YP_001932110.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus S19]
gi|225686013|ref|YP_002733985.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
melitensis ATCC 23457]
gi|254691411|ref|ZP_05154665.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 6 str. 870]
gi|254695291|ref|ZP_05157119.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 3 str. Tulya]
gi|254698166|ref|ZP_05159994.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 2 str. 86/8/59]
gi|254702577|ref|ZP_05164405.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
suis bv. 3 str. 686]
gi|254706291|ref|ZP_05168119.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
pinnipedialis M163/99/10]
gi|254711415|ref|ZP_05173226.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
pinnipedialis B2/94]
gi|254712014|ref|ZP_05173825.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
ceti M644/93/1]
gi|254715083|ref|ZP_05176894.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
ceti M13/05/1]
gi|254731834|ref|ZP_05190412.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 4 str. 292]
gi|256029955|ref|ZP_05443569.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
pinnipedialis M292/94/1]
gi|256059607|ref|ZP_05449805.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
neotomae 5K33]
gi|256111942|ref|ZP_05452893.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
melitensis bv. 3 str. Ether]
gi|256256597|ref|ZP_05462133.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 9 str. C68]
gi|256262864|ref|ZP_05465396.1| flagellar protein FlgA [Brucella melitensis bv. 2 str. 63/9]
gi|260544342|ref|ZP_05820163.1| flagellar protein FlgA [Brucella abortus NCTC 8038]
gi|260568515|ref|ZP_05838984.1| flagellar protein FlgA [Brucella suis bv. 4 str. 40]
gi|260757025|ref|ZP_05869373.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 6 str. 870]
gi|260759603|ref|ZP_05871951.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 4 str. 292]
gi|260762611|ref|ZP_05874945.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 2 str. 86/8/59]
gi|260882835|ref|ZP_05894449.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 9 str. C68]
gi|261215660|ref|ZP_05929941.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 3 str. Tulya]
gi|261216793|ref|ZP_05931074.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
ceti M13/05/1]
gi|261313735|ref|ZP_05952932.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
pinnipedialis M163/99/10]
gi|261319023|ref|ZP_05958220.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
pinnipedialis B2/94]
gi|261319660|ref|ZP_05958857.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
ceti M644/93/1]
gi|261323576|ref|ZP_05962773.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
neotomae 5K33]
gi|261753157|ref|ZP_05996866.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
suis bv. 3 str. 686]
gi|265986974|ref|ZP_06099531.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
pinnipedialis M292/94/1]
gi|265993389|ref|ZP_06105946.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
melitensis bv. 3 str. Ether]
gi|297249953|ref|ZP_06933654.1| flagella basal body P-ring formation protein FlgA [Brucella abortus
bv. 5 str. B3196]
gi|23463494|gb|AAN33362.1| flagellar basal-body P-ring formation protein FlgA, putative
[Brucella suis 1330]
gi|62197297|gb|AAX75596.1| FlgA, flagellar basal-body P-ring formation protein [Brucella
abortus bv. 1 str. 9-941]
gi|82939370|emb|CAJ12318.1| Flageller protein FlgA [Brucella melitensis biovar Abortus 2308]
gi|161337048|gb|ABX63352.1| FlgA, flagellar basal-body P-ring formation protein [Brucella canis
ATCC 23365]
gi|189020943|gb|ACD73664.1| Flageller protein FlgA [Brucella abortus S19]
gi|225642118|gb|ACO02031.1| flagella basal body P-ring formation protein FlgA [Brucella
melitensis ATCC 23457]
gi|260097613|gb|EEW81487.1| flagellar protein FlgA [Brucella abortus NCTC 8038]
gi|260155180|gb|EEW90261.1| flagellar protein FlgA [Brucella suis bv. 4 str. 40]
gi|260669921|gb|EEX56861.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 4 str. 292]
gi|260673034|gb|EEX59855.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 2 str. 86/8/59]
gi|260677133|gb|EEX63954.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 6 str. 870]
gi|260872363|gb|EEX79432.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 9 str. C68]
gi|260917267|gb|EEX84128.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
abortus bv. 3 str. Tulya]
gi|260921882|gb|EEX88450.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
ceti M13/05/1]
gi|261292350|gb|EEX95846.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
ceti M644/93/1]
gi|261298246|gb|EEY01743.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
pinnipedialis B2/94]
gi|261299556|gb|EEY03053.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
neotomae 5K33]
gi|261302761|gb|EEY06258.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
pinnipedialis M163/99/10]
gi|261742910|gb|EEY30836.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
suis bv. 3 str. 686]
gi|262764259|gb|EEZ10291.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
melitensis bv. 3 str. Ether]
gi|263092699|gb|EEZ16908.1| flagellar protein FlgA [Brucella melitensis bv. 2 str. 63/9]
gi|264659171|gb|EEZ29432.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
pinnipedialis M292/94/1]
gi|297173822|gb|EFH33186.1| flagella basal body P-ring formation protein FlgA [Brucella abortus
bv. 5 str. B3196]
Length = 160
Score = 86.9 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGN 59
R L + ++ A+ VVPS + G++++++ L E Q +
Sbjct: 8 FQTARLALAGGFLLAAMAGAGAADRIAFVVPSATVYPGQIVSDTALLEKQFFINAPAATQ 67
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
Y S+ VG V R+ LLP I +S L P +++RG ++ T G +TI+ G L
Sbjct: 68 YVLSLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGIPAPLVFTAGTLTITAMGTPLES 127
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
GD I V+N+D+G++VSG+V+ G ++V ++
Sbjct: 128 GVAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 160
>gi|183220920|ref|YP_001838916.1| flagellar protein FlgAide [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911016|ref|YP_001962571.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167775692|gb|ABZ93993.1| Endoflagellar basal body P-ring biosynthesis protein [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167779342|gb|ABZ97640.1| Flagellar protein FlgA; putative signal peptide [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 313
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 53/143 (37%), Gaps = 2/143 (1%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ F L A I + +L + ++ +++ Y +
Sbjct: 167 LDFYFAGKLVHSESVPFLIEEKKQAYFTKREIPSKTILTDEDVEVRSFFSADSLREY--T 224
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
++ VG LPD I + + I RG +V ++ T GN+ + AL+ + G
Sbjct: 225 DENPVGKTALNGFLPDTAIEKKQVRTLHTIERGQEVELVYTVGNLLLKIKTRALASGNRG 284
Query: 124 DVIAVKNIDTGVMVSGSVVDTGT 146
+ I + N+ + + V + G
Sbjct: 285 EEIPLLNLASQKTIRARVQNEGV 307
>gi|42522135|ref|NP_967515.1| flagellar protein FlgA [Bdellovibrio bacteriovorus HD100]
gi|39574666|emb|CAE78508.1| flagellar protein FlgA [Bdellovibrio bacteriovorus HD100]
Length = 310
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
S V V + +I GE + L+ + + ++D+ G + R L
Sbjct: 179 ISGTIRVSKLTPVTTRLILQGERVQADDLRMSMTDVTFAKDGSLR-MEDIQGQMAARSLP 237
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ S L R +G V+ +L + IS +A +GD+I VKN++T ++
Sbjct: 238 VGSTVWASDLKREPAAKKGQIVKALLGDDSFEISVNMMAEDSGFVGDLIKVKNLETQKVL 297
Query: 138 SGSVVDTGTVR 148
SG V + G V+
Sbjct: 298 SGLVTEKGVVK 308
>gi|119384848|ref|YP_915904.1| flagellar basal body P-ring biosynthesis protein FlgA [Paracoccus
denitrificans PD1222]
gi|119374615|gb|ABL70208.1| SAF domain [Paracoccus denitrificans PD1222]
Length = 138
Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 5/126 (3%)
Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
+ +VV + + AG V+ + + + I VVG R ++ I
Sbjct: 15 AMAGSVVANRTLPAGTVIAAGDVSLVD-----DQPGGVEDIAQVVGQQLRVMVYQGRRID 69
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
S L P ++ R V I + + I G ALS S G +I V N + V VSG V
Sbjct: 70 PSTLTAPTLVGRNQIVTIAYEKATLRIEAEGRALSAGSAGQIIRVMNNASRVTVSGRVAP 129
Query: 144 TGTVRV 149
GTV V
Sbjct: 130 DGTVIV 135
>gi|306841048|ref|ZP_07473772.1| flagella basal body P-ring formation protein FlgA [Brucella sp.
BO2]
gi|306288937|gb|EFM60237.1| flagella basal body P-ring formation protein FlgA [Brucella sp.
BO2]
Length = 160
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGN 59
R L + + A+ VVPS + G++++++ L E Q +
Sbjct: 8 FQTTRLALAGGVLFAATAGAGAADRIAFVVPSATVYPGQIVSDTALLEKQFFINAPAATQ 67
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
Y S+ VG V R+ LLP I +S L P +++RG ++ T G +TI+ G L
Sbjct: 68 YVLSLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGVPAPLVFTAGTLTITAMGTPLES 127
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
+ GD I V+N+D+G++VSG+V+ G ++V ++
Sbjct: 128 GAAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 160
>gi|222823746|ref|YP_002575320.1| flagellar basal body P-ring formation protein FlgA, [Campylobacter
lari RM2100]
gi|222538968|gb|ACM64069.1| flagellar basal body P-ring formation protein FlgA, putative
[Campylobacter lari RM2100]
Length = 228
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
F + + I+ E L+ + K +++ ++ L+ + + +
Sbjct: 101 FLKAKLEVLQSTRPISRNENLSPASFKILKIPFDKAPQGILK-KDEIANLIAKSNIRENM 159
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
++ ++ +I R V ++ G++++ AL ++ I +KN D G +V G
Sbjct: 160 ILKYNMFKTKTLIQRNDSVYGVIKDGDLSMIIELKALQSGNLNQRIRLKNKD-GKVVHGK 218
Query: 141 VVDTGTVR 148
V+ V
Sbjct: 219 VISKNYVE 226
>gi|194432426|ref|ZP_03064713.1| flagella basal body P-ring formation protein FlgA [Shigella
dysenteriae 1012]
gi|194419313|gb|EDX35395.1| flagella basal body P-ring formation protein FlgA [Shigella
dysenteriae 1012]
Length = 240
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 108 LQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 167
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 168 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 219
>gi|239834441|ref|ZP_04682769.1| flagella basal body P-ring formation protein FlgA [Ochrobactrum
intermedium LMG 3301]
gi|239822504|gb|EEQ94073.1| flagella basal body P-ring formation protein FlgA [Ochrobactrum
intermedium LMG 3301]
Length = 163
Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
VVPS + G++++++ L E Q + Y S+ G V R+ LLP I +S L
Sbjct: 39 VVPSATVYPGQIVSDTALLEKQFFINAPAASQYVLSLDQAAGKVARKTLLPGKPILVSAL 98
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
P +++RG ++ T G +TI+ G L + GD I V+N+D+G++VSG+V+ G +
Sbjct: 99 GEPSLVTRGVPAPLVFTAGTLTITAMGTPLESGAAGDFIKVRNVDSGIIVSGTVLADGRI 158
Query: 148 RVVVK 152
+V ++
Sbjct: 159 QVGMQ 163
>gi|116626489|ref|YP_828645.1| SAF domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229651|gb|ABJ88360.1| SAF domain [Candidatus Solibacter usitatus Ellin6076]
Length = 285
Score = 86.5 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 3/147 (2%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
V++ + + + V VV + + AG ++ +RL+ G Y
Sbjct: 137 SVKYAGQHRFALWARVQVLVPVAR--VVATEALQAGRPIDPARLRVESREELPATG-YLA 193
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+I++ G V RR + + L V+ G V++ + G + G+A++ ++
Sbjct: 194 AIEETAGKVPRRSIAAGTPLRAQWLEAARVVMSGDTVQVEIINGGAHLVLDGVAVTSGAV 253
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
GD + V N D+ V G VRV
Sbjct: 254 GDTVLVLNPDSKKQFRARVTAAGKVRV 280
>gi|324007912|gb|EGB77131.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 57-2]
Length = 240
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 48/112 (42%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I GE L +K + + I +V V+ R L
Sbjct: 108 LQVNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 167
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 168 PDQPIQLTQFRQAWRVKAGQRVNVIASGYGFSANAEGQALNNAAVAQNARVR 219
>gi|300918674|ref|ZP_07135255.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 115-1]
gi|300414168|gb|EFJ97478.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 115-1]
Length = 240
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 108 LQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 167
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 168 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 219
>gi|223040989|ref|ZP_03611249.1| putative flagella basal body P-ring formation protein FlgA
[Campylobacter rectus RM3267]
gi|222877745|gb|EEF12866.1| putative flagella basal body P-ring formation protein FlgA
[Campylobacter rectus RM3267]
Length = 273
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 2/124 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ + + ++L + V + + L ++ + V+ L
Sbjct: 152 PVLRATRPLATRQMLGVGDFVKDWVELGEFSPDMMSEAPNAR-LAAKQNIKSGEVLRLRQ 210
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+I +G +V +L+ G ++I AL + ++GD I VKN D + S +V
Sbjct: 211 FTSLPLIKKGERVGAVLSDGALSIIVEVTALENGNLGDTIKVKNND-KKVFSAQIVSKKQ 269
Query: 147 VRVV 150
V +
Sbjct: 270 VMIR 273
>gi|225628626|ref|ZP_03786660.1| flagella basal body P-ring formation protein FlgA [Brucella ceti
str. Cudo]
gi|237816666|ref|ZP_04595658.1| flagella basal body P-ring formation protein FlgA [Brucella abortus
str. 2308 A]
gi|225616472|gb|EEH13520.1| flagella basal body P-ring formation protein FlgA [Brucella ceti
str. Cudo]
gi|237787479|gb|EEP61695.1| flagella basal body P-ring formation protein FlgA [Brucella abortus
str. 2308 A]
gi|326410336|gb|ADZ67400.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
melitensis M28]
gi|326553628|gb|ADZ88267.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
melitensis M5-90]
Length = 165
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGN 59
R L + ++ A+ VVPS + G++++++ L E Q +
Sbjct: 13 FQTARLALAGGFLLAAMAGAGAADRIAFVVPSATVYPGQIVSDTALLEKQFFINAPAATQ 72
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
Y S+ VG V R+ LLP I +S L P +++RG ++ T G +TI+ G L
Sbjct: 73 YVLSLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGIPAPLVFTAGTLTITAMGTPLES 132
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
GD I V+N+D+G++VSG+V+ G ++V ++
Sbjct: 133 GVAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 165
>gi|57505378|ref|ZP_00371306.1| probable periplasmic protein Cj0769c [Campylobacter upsaliensis
RM3195]
gi|57016203|gb|EAL52989.1| probable periplasmic protein Cj0769c [Campylobacter upsaliensis
RM3195]
Length = 220
Score = 86.5 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
F + + I G+ + K + + + N S +D+ L+ + + +
Sbjct: 93 FIRANLEVLRSTRAIKRGDKIGAFDYKIVMMDFDKVPNNAL-SKEDLNNLLAKNNISKNT 151
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
++ ++ +I R ++ +L + + ++L A++G+ I VK+ D G ++ G
Sbjct: 152 ILRQNMFKTTAIIKRNDQIIGVLKDKGIDVLIELVSLQSANLGERIRVKSKD-GRVMQGI 210
Query: 141 VVDTGTV 147
VV V
Sbjct: 211 VVGKNRV 217
>gi|331667472|ref|ZP_08368336.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
TA271]
gi|331065057|gb|EGI36952.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
TA271]
Length = 219
Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|256014943|ref|YP_003104952.1| flagellar basal body P-ring biosynthesis protein [Brucella microti
CCM 4915]
gi|255997603|gb|ACU49290.1| flagellar basal body P-ring biosynthesis protein [Brucella microti
CCM 4915]
Length = 160
Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHS 63
R L + ++ A+ VVPS + G++++++ L E Q + Y S
Sbjct: 12 RLALAGGFLLAAMAGAGAADRIAFVVPSATVYPGQIVSDTALLEKQFFINAPAATQYVLS 71
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ VG V R+ LLP I +S L P +++RG ++ T G +TI+ G L G
Sbjct: 72 LDQAVGKVARKTLLPGKPILVSALGEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAG 131
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
D I V+N+D+G++VSG+V+ G ++V ++
Sbjct: 132 DFIKVRNVDSGIIVSGTVLANGRIQVGMQ 160
>gi|206889894|ref|YP_002249847.1| flagella basal body P-ring formation protein FlgA
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741832|gb|ACI20889.1| flagella basal body P-ring formation protein FlgA
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 231
Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 60/135 (44%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
V+ + + + GEV+ E ++ E++ S + ++G V +R L
Sbjct: 97 RAIANYEVLTRVYITQIPLKRGEVITEEKIMEIKQPLSRLPVGAITDKNLLIGKVVKRSL 156
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
+I L+ + +G+KV +I+ G + I T G+ SDA +G V+ TG
Sbjct: 157 TRGLIIKEDYLYSGMPVKKGSKVDVIINTGQVMIMTEGVLKSDAVVGGNARVQCFQTGKE 216
Query: 137 VSGSVVDTGTVRVVV 151
+ G +V VRV +
Sbjct: 217 IVGKLVGKDKVRVSL 231
>gi|323973339|gb|EGB68528.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
TA007]
Length = 209
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|167614833|ref|ZP_02383468.1| flagella basal body P-ring formation protein FlgA [Burkholderia
thailandensis Bt4]
gi|257141418|ref|ZP_05589680.1| flagella basal body P-ring formation protein FlgA [Burkholderia
thailandensis E264]
Length = 248
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 3/139 (2%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
+ + A V V + ++A E + L + T +++ + + +G +RR
Sbjct: 104 TKLTARAQVTATIPVAARDLDARETIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 162
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG- 134
L V+ +L P +I RG VRI+ G I GIA+ + + DVI ++
Sbjct: 163 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGAQDDVIRLRVGTRKD 222
Query: 135 -VMVSGSVVDTGTVRVVVK 152
+V+ V GT + +
Sbjct: 223 AKVVTVRVTGPGTAEPIAQ 241
>gi|16129035|ref|NP_415590.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli str. K-12 substr. MG1655]
gi|89107918|ref|AP_001698.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli str. K-12 substr. W3110]
gi|170080723|ref|YP_001730043.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli str. K-12 substr. DH10B]
gi|194438113|ref|ZP_03070206.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
101-1]
gi|238900326|ref|YP_002926122.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli BW2952]
gi|253773904|ref|YP_003036735.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|254161178|ref|YP_003044286.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli B str. REL606]
gi|256023230|ref|ZP_05437095.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
sp. 4_1_40B]
gi|297516831|ref|ZP_06935217.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli OP50]
gi|300928376|ref|ZP_07143910.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 187-1]
gi|300950167|ref|ZP_07164112.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 116-1]
gi|300954388|ref|ZP_07166842.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 175-1]
gi|301644984|ref|ZP_07244950.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 146-1]
gi|307137707|ref|ZP_07497063.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli H736]
gi|331641616|ref|ZP_08342751.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
H736]
gi|2494513|sp|P75933|FLGA_ECOLI RecName: Full=Flagella basal body P-ring formation protein flgA;
Flags: Precursor
gi|1787312|gb|AAC74156.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli str. K-12 substr. MG1655]
gi|4062649|dbj|BAA35880.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli str. K12 substr. W3110]
gi|169888558|gb|ACB02265.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli str. K-12 substr. DH10B]
gi|194423049|gb|EDX39043.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
101-1]
gi|238860029|gb|ACR62027.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli BW2952]
gi|242376876|emb|CAQ31593.1| flagellar biosynthesis; assembly of basal-body periplasmic P ring
[Escherichia coli BL21(DE3)]
gi|253324948|gb|ACT29550.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973079|gb|ACT38750.1| flagellar basal body P-ring biosynthesis protein A [Escherichia
coli B str. REL606]
gi|253977293|gb|ACT42963.1| flagellar basal body P-ring biosynthesis protein A [Escherichia
coli BL21(DE3)]
gi|260449788|gb|ACX40210.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
DH1]
gi|300318624|gb|EFJ68408.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 175-1]
gi|300450514|gb|EFK14134.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 116-1]
gi|300463634|gb|EFK27127.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 187-1]
gi|301076713|gb|EFK91519.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 146-1]
gi|309701344|emb|CBJ00645.1| flagellar basal body P-ring protein [Escherichia coli ETEC H10407]
gi|315135704|dbj|BAJ42863.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli DH1]
gi|315618242|gb|EFU98832.1| flagella basal body P-ring formation protein flgA [Escherichia coli
3431]
gi|323937812|gb|EGB34076.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
E1520]
gi|323942541|gb|EGB38708.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
E482]
gi|323962671|gb|EGB58249.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
H489]
gi|331038414|gb|EGI10634.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
H736]
Length = 219
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|83717277|ref|YP_438385.1| flagella basal body P-ring formation protein FlgA [Burkholderia
thailandensis E264]
gi|83651102|gb|ABC35166.1| flagella basal body P-ring formation protein FlgA [Burkholderia
thailandensis E264]
Length = 257
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 3/139 (2%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
+ + A V V + ++A E + L + T +++ + + +G +RR
Sbjct: 113 TKLTARAQVTATIPVAARDLDARETIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 171
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG- 134
L V+ +L P +I RG VRI+ G I GIA+ + + DVI ++
Sbjct: 172 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGAQDDVIRLRVGTRKD 231
Query: 135 -VMVSGSVVDTGTVRVVVK 152
+V+ V GT + +
Sbjct: 232 AKVVTVRVTGPGTAEPIAQ 250
>gi|182412220|ref|YP_001817286.1| flagellar basal body P-ring biosynthesis protein-like protein
[Opitutus terrae PB90-1]
gi|177839434|gb|ACB73686.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Opitutus terrae PB90-1]
Length = 233
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 54/146 (36%), Gaps = 1/146 (0%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
R L + L A++ + + + L +V R ++
Sbjct: 88 RVLADSIAVADATLVLRAALWRDVWAARQPLAKDSTFDPAVLDTRRVDLLREREALPVNV 147
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
D R + ++ + R ++ +G V + +G + I+ +A+ + S G+
Sbjct: 148 GDRS-YSFARTIGSGRLLTWHDIARRPLVRKGDLVEVSAVEGQLLITMQAMAMENGSQGE 206
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRVV 150
+ V+N + + +VVD V+V
Sbjct: 207 TVTVRNPVSRRDFAATVVDENRVQVR 232
>gi|163844347|ref|YP_001622002.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
suis ATCC 23445]
gi|163675070|gb|ABY39180.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 160
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGN 59
R L + ++ A+ VVPS + G++++++ L E Q +
Sbjct: 8 FQTARLALAGGFLLAAMAGAGAADRIAFVVPSATVYPGQIVSDTVLLEKQFFINAPAATQ 67
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
Y S+ VG V R+ LLP I +S L P +++RG ++ T G +TI+ G L
Sbjct: 68 YVLSLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGIPAPLVFTAGTLTITAMGTPLES 127
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
GD I V+N+D+G++VSG+V+ G ++V ++
Sbjct: 128 GVAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 160
>gi|187730893|ref|YP_001880756.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
boydii CDC 3083-94]
gi|187427885|gb|ACD07159.1| flagella basal body P-ring formation protein FlgA [Shigella boydii
CDC 3083-94]
Length = 219
Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|157160599|ref|YP_001457917.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli HS]
gi|170020532|ref|YP_001725486.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli ATCC 8739]
gi|157066279|gb|ABV05534.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
HS]
gi|169755460|gb|ACA78159.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
ATCC 8739]
Length = 219
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|331672592|ref|ZP_08373381.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
TA280]
gi|331070235|gb|EGI41601.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
TA280]
Length = 240
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 108 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 167
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 168 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 219
>gi|118474723|ref|YP_892063.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter fetus subsp. fetus 82-40]
gi|118413949|gb|ABK82369.1| flagella basal body P-ring formation protein FlgA, putative
[Campylobacter fetus subsp. fetus 82-40]
Length = 258
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 1/129 (0%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
+ +V I+ +LN S ++ V+ + L+TR + +
Sbjct: 131 IDANVNVLVAIKDIDRDHILNLSDYEQKSVSLKEYDKEALKEAPKNIKLITRTRIKRGKI 190
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
+ I +G + +L G + I AL D ++GD+I V+N + + +V
Sbjct: 191 LTNRQFKTLSDIKKGDLINAVLKDGALNIEVLVTALEDGNVGDIIQVRN-ENNQVFKANV 249
Query: 142 VDTGTVRVV 150
+ V +
Sbjct: 250 ISKNRVLIR 258
>gi|254438146|ref|ZP_05051640.1| SAF domain family [Octadecabacter antarcticus 307]
gi|198253592|gb|EDY77906.1| SAF domain family [Octadecabacter antarcticus 307]
Length = 224
Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 7 LLFFSLYVLSLDSLFASV--------IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
+ +S+ V + ++ AV + G+ + L+ +
Sbjct: 73 PVTWSILVRAQVQGAIALIPEASQGYTTQAVFLRRPLRGGDRIQVEDLELRPI-APLSSS 131
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
+ ++++DVVG V + L P + L R + + G V + + +G I T G+AL
Sbjct: 132 SVYNALEDVVGRVLVQSLSPRVPVMPRHLERDWAVDLGDVVSLRVVRGGTEIETFGVALE 191
Query: 119 DASIGDVIAVKNIDTGVMV 137
IGD I ++N +G +
Sbjct: 192 SGQIGDKIRIENRSSGREL 210
>gi|329296223|ref|ZP_08253559.1| flagellar basal body P-ring biosynthesis protein FlgA [Plautia
stali symbiont]
Length = 115
Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 37 AGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96
GE L+ L+ + + + + +VG V R L ++ L R + I +G
Sbjct: 1 PGETLSADDLRSVSGDLAALPPGALLQQQALVGQVPLRALAAGQILTQGQLRRSWRIRQG 60
Query: 97 AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
+V I+ + + G AL++A++G +AVK G V G V G +
Sbjct: 61 EEVDIVAQGQGFRLRSKGKALNNAAVGQTLAVK-TAAGQRVQGVVSADGKI 110
>gi|227886570|ref|ZP_04004375.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
83972]
gi|300974376|ref|ZP_07172588.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 45-1]
gi|301051144|ref|ZP_07197974.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 185-1]
gi|227836774|gb|EEJ47240.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
83972]
gi|300297165|gb|EFJ53550.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 185-1]
gi|300410619|gb|EFJ94157.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 45-1]
gi|307553074|gb|ADN45849.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
ABU 83972]
gi|315291066|gb|EFU50429.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 153-1]
Length = 240
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 49/112 (43%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I GE L +K + + I +V V+ R L
Sbjct: 108 LQVNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 167
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + ++ + G AL++A++ V+
Sbjct: 168 PDQPIQLTQFRQAWRVKAGQRVNVIASGYGVSANAEGQALNNAAVAQNARVR 219
>gi|300024605|ref|YP_003757216.1| flagella basal body P-ring formation protein FlgA [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526426|gb|ADJ24895.1| flagella basal body P-ring formation protein FlgA [Hyphomicrobium
denitrificans ATCC 51888]
Length = 153
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 4 VRFLLFFSLYVLSLDSLFA--SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
++ L +L+VL L + + VP+ VI G+++ L + QV S+
Sbjct: 2 MKSLALGTLFVLGLAGAASADDALRTVFVPNNVIYPGDMITADALVQRQVRVSSGNMAVF 61
Query: 62 -HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ KD++G + RR LL + +P S + + +G ++I +++I GIA
Sbjct: 62 GENPKDLIGKMARRTLLRNEYVPRSAVREQDAVLQGKPYKVIYNSESLSIVGEGIAQKAG 121
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
++GD+I+V+N TGVM V T+ V
Sbjct: 122 AVGDIISVRNTATGVMFKARVQADQTLAV 150
>gi|327398887|ref|YP_004339756.1| flagella basal body P-ring formation protein FlgA [Hippea maritima
DSM 10411]
gi|327181516|gb|AEA33697.1| flagella basal body P-ring formation protein FlgA [Hippea maritima
DSM 10411]
Length = 295
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 2/122 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
V + I +G ++ + + + Y + ++ V + LS
Sbjct: 175 IPVAAKDIESGSIITPDDITFKT--SDRVLSTYLTNKPSIINRVAISFIKKGSPFTLSNT 232
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
R + G V++++ GN+ I T AL ++I + + + + ++ V
Sbjct: 233 KRFRPVKVGDIVKVMVISGNIVIRTTAKALRGGYKDEIIPIMYLSSKRVFPAKIIGKKEV 292
Query: 148 RV 149
V
Sbjct: 293 LV 294
>gi|260564304|ref|ZP_05834789.1| flagellar protein FlgA [Brucella melitensis bv. 1 str. 16M]
gi|265989512|ref|ZP_06102069.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
melitensis bv. 1 str. Rev.1]
gi|260151947|gb|EEW87040.1| flagellar protein FlgA [Brucella melitensis bv. 1 str. 16M]
gi|263000181|gb|EEZ12871.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
melitensis bv. 1 str. Rev.1]
Length = 157
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGN 59
R L + ++ A+ VVPS + G +++++ L E Q +
Sbjct: 5 FQTARLALAGGFLLAAMAGAGAADRIAFVVPSATVYPGPIVSDTALLEKQFFINAPAATQ 64
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
Y S+ VG V R+ LLP I +S L P +++RG ++ T G +TI+ G L
Sbjct: 65 YVLSLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGIPAPLVFTAGTLTITAMGTPLES 124
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
GD I V+N+D+G++VSG+V+ G ++V ++
Sbjct: 125 GVAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 157
>gi|110805090|ref|YP_688610.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
flexneri 5 str. 8401]
gi|331652125|ref|ZP_08353144.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
M718]
gi|110614638|gb|ABF03305.1| Flagellar basal body P-ring biosynthesis protein [Shigella flexneri
5 str. 8401]
gi|331050403|gb|EGI22461.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
M718]
Length = 219
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|323174800|gb|EFZ60415.1| flagella basal body P-ring formation protein flgA [Escherichia coli
LT-68]
Length = 212
Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 80 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 139
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 140 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 191
>gi|150020565|ref|YP_001305919.1| flagellar basal body P-ring biosynthesis protein-like protein
[Thermosipho melanesiensis BI429]
gi|149793086|gb|ABR30534.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Thermosipho melanesiensis BI429]
Length = 310
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 8/151 (5%)
Query: 6 FLLFFSLYVLSLDSLF------ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
FL+ FSL + A I V + IN GE + + V ++ G
Sbjct: 158 FLVRFSLIKEGKIRGYFNVNLIAEYIRKIPVAARNINYGEQIKRDDVVFSDVNVLSLHGT 217
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
+ + +V ++ I L + + G + + + + A+
Sbjct: 218 PVDVSR--LPMVAKKYFKVGEPIFEEFLEKVPDVVVGQLIFGYVELPGVKVHALLRAMES 275
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
++GDVI +N+D+G +V G +V+ ++VV
Sbjct: 276 GNVGDVIKARNVDSGKIVYGVIVEGPMLKVV 306
>gi|15801189|ref|NP_287206.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O157:H7 EDL933]
gi|15830704|ref|NP_309477.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O157:H7 str. Sakai]
gi|168747152|ref|ZP_02772174.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4113]
gi|168758636|ref|ZP_02783643.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4401]
gi|168764484|ref|ZP_02789491.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4501]
gi|168767731|ref|ZP_02792738.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4486]
gi|168773917|ref|ZP_02798924.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4196]
gi|168783602|ref|ZP_02808609.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4076]
gi|168790007|ref|ZP_02815014.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC869]
gi|168802017|ref|ZP_02827024.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC508]
gi|195935462|ref|ZP_03080844.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O157:H7 str. EC4024]
gi|208805981|ref|ZP_03248318.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4206]
gi|208816357|ref|ZP_03257536.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4045]
gi|208822785|ref|ZP_03263104.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4042]
gi|209398728|ref|YP_002269918.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4115]
gi|217328503|ref|ZP_03444585.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. TW14588]
gi|254792454|ref|YP_003077291.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O157:H7 str. TW14359]
gi|261227023|ref|ZP_05941304.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O157:H7 str. FRIK2000]
gi|261256257|ref|ZP_05948790.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O157:H7 str. FRIK966]
gi|291282092|ref|YP_003498910.1| Flagellar biosynthesis [Escherichia coli O55:H7 str. CB9615]
gi|12514610|gb|AAG55818.1|AE005317_7 flagellar biosynthesis; assembly of basal-body periplasmic P ring
[Escherichia coli O157:H7 str. EDL933]
gi|13360914|dbj|BAB34873.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. Sakai]
gi|187770424|gb|EDU34268.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4196]
gi|188018189|gb|EDU56311.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4113]
gi|188999053|gb|EDU68039.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4076]
gi|189354582|gb|EDU73001.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4401]
gi|189363110|gb|EDU81529.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4486]
gi|189365539|gb|EDU83955.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4501]
gi|189370501|gb|EDU88917.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC869]
gi|189375925|gb|EDU94341.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC508]
gi|208725782|gb|EDZ75383.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4206]
gi|208733005|gb|EDZ81693.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4045]
gi|208738270|gb|EDZ85953.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4042]
gi|209160128|gb|ACI37561.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. EC4115]
gi|209773418|gb|ACI85021.1| flagella basal body P-ring formation protein FlgA [Escherichia
coli]
gi|209773420|gb|ACI85022.1| flagella basal body P-ring formation protein FlgA [Escherichia
coli]
gi|209773422|gb|ACI85023.1| flagella basal body P-ring formation protein FlgA [Escherichia
coli]
gi|209773424|gb|ACI85024.1| flagella basal body P-ring formation protein FlgA [Escherichia
coli]
gi|209773426|gb|ACI85025.1| flagella basal body P-ring formation protein FlgA [Escherichia
coli]
gi|217318930|gb|EEC27356.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
O157:H7 str. TW14588]
gi|254591854|gb|ACT71215.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli O157:H7 str. TW14359]
gi|290761965|gb|ADD55926.1| Flagellar biosynthesis [Escherichia coli O55:H7 str. CB9615]
gi|320189754|gb|EFW64410.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia
coli O157:H7 str. EC1212]
gi|320637523|gb|EFX07323.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O157:H7 str. G5101]
gi|320643084|gb|EFX12285.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O157:H- str. 493-89]
gi|320648542|gb|EFX17197.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O157:H- str. H 2687]
gi|320653856|gb|EFX21930.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320659336|gb|EFX26905.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O55:H7 str. USDA 5905]
gi|320664471|gb|EFX31622.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli O157:H7 str. LSU-61]
gi|326339294|gb|EGD63108.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia
coli O157:H7 str. 1125]
gi|326344746|gb|EGD68494.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia
coli O157:H7 str. 1044]
Length = 219
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLGAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|157158222|ref|YP_001462306.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli E24377A]
gi|193064598|ref|ZP_03045678.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
E22]
gi|193069445|ref|ZP_03050399.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
E110019]
gi|194428442|ref|ZP_03060982.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
B171]
gi|209918326|ref|YP_002292410.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli SE11]
gi|218553651|ref|YP_002386564.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli IAI1]
gi|218694606|ref|YP_002402273.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli 55989]
gi|256018671|ref|ZP_05432536.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella sp.
D9]
gi|260843312|ref|YP_003221090.1| assembly protein FlgA for flagellar basal-body periplasmic P ring
[Escherichia coli O103:H2 str. 12009]
gi|260854555|ref|YP_003228446.1| assembly protein FlgA for flagellar basal-body periplasmic P ring
[Escherichia coli O26:H11 str. 11368]
gi|260867435|ref|YP_003233837.1| assembly protein FlgA for flagellar basal-body periplasmic P ring
[Escherichia coli O111:H- str. 11128]
gi|293433362|ref|ZP_06661790.1| flagella basal body P-ring formation protein flgA [Escherichia coli
B088]
gi|300816774|ref|ZP_07096994.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 107-1]
gi|300821147|ref|ZP_07101296.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 119-7]
gi|300922598|ref|ZP_07138698.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 182-1]
gi|301328558|ref|ZP_07221619.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 78-1]
gi|309798066|ref|ZP_07692441.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 145-7]
gi|331676863|ref|ZP_08377559.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
H591]
gi|332279740|ref|ZP_08392153.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella sp.
D9]
gi|157080252|gb|ABV19960.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
E24377A]
gi|192927850|gb|EDV82464.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
E22]
gi|192957193|gb|EDV87642.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
E110019]
gi|194413494|gb|EDX29776.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
B171]
gi|209911585|dbj|BAG76659.1| flagellar basal body P-ring protein FlgA precursor [Escherichia
coli SE11]
gi|218351338|emb|CAU97044.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli 55989]
gi|218360419|emb|CAQ97971.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli IAI1]
gi|257753204|dbj|BAI24706.1| assembly protein FlgA for flagellar basal-body periplasmic P ring
[Escherichia coli O26:H11 str. 11368]
gi|257758459|dbj|BAI29956.1| assembly protein FlgA for flagellar basal-body periplasmic P ring
[Escherichia coli O103:H2 str. 12009]
gi|257763791|dbj|BAI35286.1| assembly protein FlgA for flagellar basal-body periplasmic P ring
[Escherichia coli O111:H- str. 11128]
gi|291324181|gb|EFE63603.1| flagella basal body P-ring formation protein flgA [Escherichia coli
B088]
gi|300421075|gb|EFK04386.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 182-1]
gi|300526446|gb|EFK47515.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 119-7]
gi|300530548|gb|EFK51610.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 107-1]
gi|300844950|gb|EFK72710.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 78-1]
gi|308118349|gb|EFO55611.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 145-7]
gi|323156879|gb|EFZ43013.1| flagella basal body P-ring formation protein flgA [Escherichia coli
EPECa14]
gi|323185805|gb|EFZ71166.1| flagella basal body P-ring formation protein flgA [Escherichia coli
1357]
gi|323947626|gb|EGB43630.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
H120]
gi|324017424|gb|EGB86643.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 117-3]
gi|324117357|gb|EGC11264.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
E1167]
gi|331075552|gb|EGI46850.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
H591]
gi|332102092|gb|EGJ05438.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella sp.
D9]
Length = 219
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|320173524|gb|EFW48720.1| Flagellar basal-body P-ring formation protein FlgA [Shigella
dysenteriae CDC 74-1112]
Length = 156
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 24 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 83
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 84 PDQPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135
>gi|191168474|ref|ZP_03030262.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
B7A]
gi|190901493|gb|EDV61254.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
B7A]
Length = 219
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|293414367|ref|ZP_06657016.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
B185]
gi|291434425|gb|EFF07398.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
B185]
Length = 219
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++AS+ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNASVAQNARVR 198
>gi|293409438|ref|ZP_06653014.1| flagella basal body P-ring formation protein flgA [Escherichia coli
B354]
gi|331662478|ref|ZP_08363401.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
TA143]
gi|331682574|ref|ZP_08383193.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
H299]
gi|284920895|emb|CBG33958.1| flagellar basal body P-ring protein [Escherichia coli 042]
gi|291469906|gb|EFF12390.1| flagella basal body P-ring formation protein flgA [Escherichia coli
B354]
gi|331060900|gb|EGI32864.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
TA143]
gi|331080205|gb|EGI51384.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
H299]
Length = 219
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|114706772|ref|ZP_01439672.1| flagellar basal body P-ring biosynthesis protein A [Fulvimarina
pelagi HTCC2506]
gi|114537720|gb|EAU40844.1| flagellar basal body P-ring biosynthesis protein A [Fulvimarina
pelagi HTCC2506]
Length = 153
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTN-SNIRGNY 60
++ L SL + A+ + VP VVI G+ + + L G +
Sbjct: 4 RLLKTALALSLGLSGATGSLAAEL-DMPVPGVVIYPGQDIVAAGLSTRTFIVKDEKVGLF 62
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+D+ G V RR LLP I + L P + G V +I + + I+ G+AL
Sbjct: 63 VVDREDLYGHVARRTLLPGKAIRRADLTTPDAVKAGTNVTLIYAEEGLVITGLGMALESG 122
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
G+ I V+N D+G+ +SG + GT+ V
Sbjct: 123 QEGETIRVRNTDSGITISGRISPDGTIAV 151
>gi|188494240|ref|ZP_03001510.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
53638]
gi|188489439|gb|EDU64542.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
53638]
Length = 219
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|237751781|ref|ZP_04582261.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
bilis ATCC 43879]
gi|229373147|gb|EEO23538.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
bilis ATCC 43879]
Length = 221
Score = 84.6 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
D +R+ + S+ + + + I AG + + S++
Sbjct: 88 DSIRYSINGSIQIHT--------------ATESIRAGSNITTNSFMTKTQDFSSL-ALIP 132
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
S +++ + + + +I + L + ++S+ + V+II + S +G AL +
Sbjct: 133 ASRYEILQSSAKVYIPVNTIIYRNKLAKRMLVSKDSNVKIIFRDNGIEASASGRALENGV 192
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
GD I ++N+++ ++ V+ V++
Sbjct: 193 QGDTIKIENLESKRTINAKVIAENVVQI 220
>gi|256043074|ref|ZP_05446018.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
melitensis bv. 1 str. Rev.1]
Length = 159
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGN 59
R L + ++ A+ VVPS + G +++++ L E Q +
Sbjct: 7 FQTARLALAGGFLLAAMAGAGAADRIAFVVPSATVYPGPIVSDTALLEKQFFINAPAATQ 66
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
Y S+ VG V R+ LLP I +S L P +++RG ++ T G +TI+ G L
Sbjct: 67 YVLSLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGIPAPLVFTAGTLTITAMGTPLES 126
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
GD I V+N+D+G++VSG+V+ G ++V ++
Sbjct: 127 GVAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 159
>gi|218704480|ref|YP_002411999.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli UMN026]
gi|293404356|ref|ZP_06648350.1| flgA [Escherichia coli FVEC1412]
gi|298380136|ref|ZP_06989741.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
FVEC1302]
gi|300899591|ref|ZP_07117830.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 198-1]
gi|218431577|emb|CAR12456.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli UMN026]
gi|291428942|gb|EFF01967.1| flgA [Escherichia coli FVEC1412]
gi|298279834|gb|EFI21342.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
FVEC1302]
gi|300356862|gb|EFJ72732.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 198-1]
Length = 219
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|301029714|ref|ZP_07192768.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 196-1]
gi|312971208|ref|ZP_07785386.1| flagella basal body P-ring formation protein flgA [Escherichia coli
1827-70]
gi|299877402|gb|EFI85613.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 196-1]
gi|310336410|gb|EFQ01596.1| flagella basal body P-ring formation protein flgA [Escherichia coli
1827-70]
gi|332092907|gb|EGI97975.1| flagella basal body P-ring formation protein flgA [Shigella
dysenteriae 155-74]
gi|332342617|gb|AEE55951.1| flagellar basal body P-ring formation protein FlgA [Escherichia
coli UMNK88]
Length = 156
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 24 LQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 83
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 84 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135
>gi|170748106|ref|YP_001754366.1| FlgA, flagellar basal-body P-ring formation protein
[Methylobacterium radiotolerans JCM 2831]
gi|170654628|gb|ACB23683.1| FlgA, flagellar basal-body P-ring formation protein
[Methylobacterium radiotolerans JCM 2831]
Length = 142
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS-IKDVVGLV 71
+ + ++ A + V + I AG+V+ + L+E VG +
Sbjct: 4 VMATGPAIAAEQMLPVPVAT--IYAGDVIKPTMLREQAFPEGYRPRLPVADTAARAVGRI 61
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
RR LLP IP L +++RGA I+ + +TIST G AL++A++ + + V+N
Sbjct: 62 ARRTLLPGETIPSIALEEAKLVTRGAPAVIVFEEHGVTISTVGTALANAAVNEAVNVRNA 121
Query: 132 DTGVMVSGSVVDTGTVR 148
TG +V G V G VR
Sbjct: 122 ATGRVVQGIVQPDGRVR 138
>gi|170681963|ref|YP_001744109.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli SMS-3-5]
gi|170519681|gb|ACB17859.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
SMS-3-5]
Length = 219
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R +
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDIS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|26247212|ref|NP_753252.1| flagellar basal body P-ring biosynthesis protein FlgA [Escherichia
coli CFT073]
gi|26107613|gb|AAN79812.1|AE016759_86 Flagella basal body P-ring formation protein flgA precursor
[Escherichia coli CFT073]
Length = 219
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 49/112 (43%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I GE L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGEKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + ++ + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGYGVSANAEGQALNNAAVAQNARVR 198
>gi|323967013|gb|EGB62439.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
M863]
gi|327253471|gb|EGE65109.1| flagella basal body P-ring formation protein flgA [Escherichia coli
STEC_7v]
Length = 219
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 48/112 (42%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I ++ V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLIDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
P+ I L+ L + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PEQPIQLTQLRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|300902463|ref|ZP_07120445.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 84-1]
gi|301304989|ref|ZP_07211091.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 124-1]
gi|300405495|gb|EFJ89033.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 84-1]
gi|300839707|gb|EFK67467.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 124-1]
gi|315253873|gb|EFU33841.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 85-1]
Length = 219
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|301023259|ref|ZP_07187056.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 69-1]
gi|300397104|gb|EFJ80642.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
MS 69-1]
Length = 219
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQSIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|114330357|ref|YP_746579.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrosomonas
eutropha C91]
gi|114307371|gb|ABI58614.1| putative flagella basal body P-ring formation protein [Nitrosomonas
eutropha C91]
Length = 231
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
++LYV VI + + + IN G++++ + +V I VV
Sbjct: 94 AWTLYVPVEI----EVIANVIHAAQPINMGKLVDTQDIVSKEVDLVRIPAGAVTDPDQVV 149
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G V L I L PY+I+RG K+R+ T +ST G AL+ A+ G+V+ +
Sbjct: 150 GKVAVTFLASGQPIRTHQLRAPYIITRGQKIRLTATGAGFAVSTEGEALAAAAEGEVVQI 209
Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
+N TG ++SG G V +
Sbjct: 210 RN-HTGRIMSGIARAGGIVEI 229
>gi|291288378|ref|YP_003505194.1| flagella basal body P-ring formation protein FlgA [Denitrovibrio
acetiphilus DSM 12809]
gi|290885538|gb|ADD69238.1| flagella basal body P-ring formation protein FlgA [Denitrovibrio
acetiphilus DSM 12809]
Length = 285
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 4/129 (3%)
Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
V S I GE ++ R+++ + S + G G++ + L +
Sbjct: 161 AFQDIYVTSSSIRKGEDVS-GRVQKERYELSRVHGEPVKDPS---GMIATKNLSSGRPLT 216
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
L + G V ++ G + ++T+G DA IG + VKN +G +V G
Sbjct: 217 LGDVMMKPDAFEGTTVLLVYRSGALNVTTSGELQEDAYIGKNVRVKNTASGKIVRGRYEQ 276
Query: 144 TGTVRVVVK 152
V V +
Sbjct: 277 GRKVVVNAQ 285
>gi|333008272|gb|EGK27746.1| flagella basal body P-ring formation protein flgA [Shigella
flexneri K-272]
gi|333019762|gb|EGK39034.1| flagella basal body P-ring formation protein flgA [Shigella
flexneri K-227]
Length = 156
Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 24 LQVNVQATGNYVVAAMPIVRGGKLEADNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 83
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 84 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135
>gi|213585153|ref|ZP_03366979.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 117
Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 34 VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
+ G L + + + + I+ + V+ R L P + L+++ + + +
Sbjct: 1 PVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLAPGQPVQLTMIRQAWRV 60
Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
G +V++I +++ G A+++A++ V+ + +G +VSG+V G + + +
Sbjct: 61 KAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSGTVDSDGNILINL 117
>gi|207091891|ref|ZP_03239678.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori HPKX_438_AG0C1]
Length = 218
Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 55/136 (40%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A + I E + + ++ ++ + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSASAIKKDENITANNTQKERIPFGALSNPLLEGAIDKV--SAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALHQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|256158117|ref|ZP_05456035.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
ceti M490/95/1]
gi|256252929|ref|ZP_05458465.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
ceti B1/94]
gi|261220020|ref|ZP_05934301.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
ceti B1/94]
gi|265996634|ref|ZP_06109191.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
ceti M490/95/1]
gi|260918604|gb|EEX85257.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
ceti B1/94]
gi|262550931|gb|EEZ07092.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
ceti M490/95/1]
Length = 160
Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGN 59
R L + ++ A+ V+P + G++++++ L E Q +
Sbjct: 8 FQTARLALAGGFLLAAMAGAGAADRIAFVMPLATVYPGQIVSDTALLEKQFFINAPAATQ 67
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
Y S+ VG V R+ LLP I +S L P +++RG ++ T G +TI+ G L
Sbjct: 68 YVLSLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGIPAPLVFTAGTLTITAMGTPLES 127
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
GD I V+N+D+G++VSG+V+ G ++V ++
Sbjct: 128 GVAGDFIKVRNVDSGIIVSGTVLANGRIQVGMQ 160
>gi|325111112|ref|YP_004272180.1| flagella basal body P-ring formation protein FlgA [Planctomyces
brasiliensis DSM 5305]
gi|324971380|gb|ADY62158.1| flagella basal body P-ring formation protein FlgA [Planctomyces
brasiliensis DSM 5305]
Length = 447
Score = 83.9 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 54/139 (38%), Gaps = 3/139 (2%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
L V + S + + G+V+ L+ ++ + ++V+G
Sbjct: 194 LPVARELRVVLSESPRVLALKRALPRGKVIRADDLQWVE---AEQTAGLFLDPQEVIGTE 250
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
T R + D + S + + ++ R V + G++++ +L +AS+G + + +
Sbjct: 251 TIRSVRADQPLQQSDVRQLPLVRRNEIVSVSANIGSISVRRYCRSLGEASLGQFVTLVPV 310
Query: 132 DTGVMVSGSVVDTGTVRVV 150
D ++ V V+
Sbjct: 311 DGKDKITARVTGLREAEVL 329
>gi|82777314|ref|YP_403663.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
dysenteriae Sd197]
gi|81241462|gb|ABB62172.1| assembly of basal-body periplasmic P ring [Shigella dysenteriae
Sd197]
Length = 219
Score = 83.9 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 46/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLGAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDPS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQSIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|254299690|ref|ZP_04967139.1| flagella basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 406e]
gi|157809683|gb|EDO86853.1| flagella basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 406e]
Length = 233
Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 3/139 (2%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
+ + A V V + ++A E + L + T +++ + + +G +RR
Sbjct: 89 TKLTARAQVTATIPVAARDLDAREPIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 147
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT 133
L V+ +L P +I RG VRI+ G I GIA+ + + DVI ++
Sbjct: 148 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDVIRLRVGTRRD 207
Query: 134 GVMVSGSVVDTGTVRVVVK 152
+V+ V GT + +
Sbjct: 208 AKVVAVRVTGPGTAEPIAQ 226
>gi|307310150|ref|ZP_07589800.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
W]
gi|306909868|gb|EFN40362.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
W]
gi|315060350|gb|ADT74677.1| assembly protein for flagellar basal-body periplasmic P ring
[Escherichia coli W]
gi|323379089|gb|ADX51357.1| flagella basal body P-ring formation protein FlgA [Escherichia coli
KO11]
Length = 219
Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPLRTVLDINQLVDAISLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|154249530|ref|YP_001410355.1| flagellar basal body P-ring biosynthesis protein-like protein
[Fervidobacterium nodosum Rt17-B1]
gi|154153466|gb|ABS60698.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Fervidobacterium nodosum Rt17-B1]
Length = 319
Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 8 LFFSLYVLSLDSLFASVIGHAV------VPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
+ +L + + S+ A+ V I E++ + ++ ++ ++
Sbjct: 170 VRITLKKSGRAAGYISLQYEAIWIRKIAVSKRRIEKEEIIGLNDVEFVEYNIYSLNKMPV 229
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
V +V +I + +I +G V+ I G + +ST AL + +
Sbjct: 230 FEEDLPVM--ADKVFQKGEIIDGKYISDVPLIVKGQVVKAISIVGGVMVSTLVQALENGN 287
Query: 122 IGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
+G VI+VKN++ GV++ G++ + GT+ V+
Sbjct: 288 VGKVISVKNLENGVIIKGTIQEDGTIIVL 316
>gi|320200967|gb|EFW75551.1| Flagellar basal-body P-ring formation protein FlgA [Escherichia
coli EC4100B]
Length = 219
Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPLRTVLDINQLVDAISLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 198
>gi|319409186|emb|CBI82830.1| Flagella basal body P-ring formation protein FlgA [Bartonella
schoenbuchensis R1]
Length = 152
Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTN-SNIRGNYAHSIKDVVGLVTRRVL 76
++ + + +VP+ + AG+ +++ L E S YA + ++ V +R L
Sbjct: 18 LTVVYADRVNFIVPNKSVYAGQRVSDVGLSEKSFFIKSEAASLYATQMNQLLNKVAKRTL 77
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
I L+ L P ++ RG ++I N+ I+ G+ L S GD+I V+N D+G +
Sbjct: 78 TAGRPISLASLGDPVLVERGQTTKLIFQMNNLQITALGVVLQSGSSGDLIRVRNADSGRI 137
Query: 137 VSGSVVDTGTVRV 149
V G+V+ G VRV
Sbjct: 138 VMGTVLQNGDVRV 150
>gi|167905086|ref|ZP_02492291.1| flagella basal body P-ring formation protein FlgA [Burkholderia
pseudomallei NCTC 13177]
Length = 233
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 3/139 (2%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
+ + A V V + ++A E + L + T +++ + + +G +RR
Sbjct: 89 TKLTARAQVTATIPVAARDLDAREPIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 147
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT 133
L V+ +L P +I RG VRI+ G I GIA+ + + DVI ++
Sbjct: 148 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDVIRLRVGTRRD 207
Query: 134 GVMVSGSVVDTGTVRVVVK 152
+V+ V GT + +
Sbjct: 208 AKVVAVRVTGPGTAEPIAQ 226
>gi|82544462|ref|YP_408409.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
boydii Sb227]
gi|81245873|gb|ABB66581.1| assembly of basal-body periplasmic P ring [Shigella boydii Sb227]
gi|320186982|gb|EFW61695.1| Flagellar basal-body P-ring formation protein FlgA [Shigella
flexneri CDC 796-83]
gi|332094040|gb|EGI99092.1| flagella basal body P-ring formation protein flgA [Shigella boydii
3594-74]
Length = 219
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ ++
Sbjct: 147 PDQPIQLTHFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARMR 198
>gi|167567746|ref|ZP_02360662.1| flagella basal body P-ring formation protein FlgA [Burkholderia
oklahomensis EO147]
gi|167574697|ref|ZP_02367571.1| flagella basal body P-ring formation protein FlgA [Burkholderia
oklahomensis C6786]
Length = 256
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 3/137 (2%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
A+V V + I A + + L + +++ + +D +G +R
Sbjct: 110 APFRLIARATVKATVPVAARDIEARQPIVADDLADEPRDIASLT-DTVTRAEDAIGRSSR 168
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NI 131
R + ++ L P +I RG VR++ G I G+A+ DVI V+
Sbjct: 169 RAVHAGQILRRRHLQTPELIRRGQTVRVVARVGRAEIVNTGVAMQSGGKDDVIRVRVGGR 228
Query: 132 DTGVMVSGSVVDTGTVR 148
V + GT
Sbjct: 229 SNHKTVDVRITAAGTAE 245
>gi|289549045|ref|YP_003474033.1| flagella basal body P-ring formation protein FlgA [Thermocrinis
albus DSM 14484]
gi|289182662|gb|ADC89906.1| flagella basal body P-ring formation protein FlgA [Thermocrinis
albus DSM 14484]
Length = 215
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 9/129 (6%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
++ I G VL + + ++ + + +T + +I S+
Sbjct: 90 TVLIAKEDIPKGRVLKPDMFYKEERWGRSVPSDLRLEDIHLSQYITSTFIPKGSIIRRSL 149
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV-----KNIDTGVMVSGSV 141
L + G V T GN+ + +L IG + V KN ++ V
Sbjct: 150 LKPIPAVEIGQTVEAFYTSGNLELKFHARSLDRGYIGKTVRVLPEGKKNP----ILRAKV 205
Query: 142 VDTGTVRVV 150
+ G V+++
Sbjct: 206 IAPGKVQIL 214
>gi|30248318|ref|NP_840388.1| flagellar basal body P-ring biosynthesis protein FlgA [Nitrosomonas
europaea ATCC 19718]
gi|30138204|emb|CAD84212.1| putative flagella basal body P-ring formation protein [Nitrosomonas
europaea ATCC 19718]
Length = 230
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
++LYV VI V + ++ G+ L + + I G A V+G
Sbjct: 94 WTLYVPVEI----EVITRVVHAAQPVSMGKQLEAQDIVSKEADLVRIPGEVATDPDQVIG 149
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
V L I L P+VISRG KVR+ T +S G AL+ A+ G+V+ V+
Sbjct: 150 KVATTFLASGQPIRTHQLRAPHVISRGQKVRLTATGAGFAVSMEGEALAAAAAGEVVQVR 209
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
N TG ++ G G V +
Sbjct: 210 N-HTGRIIRGIARAGGVVEI 228
>gi|333005620|gb|EGK25138.1| flagella basal body P-ring formation protein flgA [Shigella
flexneri K-218]
Length = 159
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 27 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 86
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 87 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 138
>gi|74311634|ref|YP_310053.1| flagellar basal body P-ring biosynthesis protein FlgA [Shigella
sonnei Ss046]
gi|73855111|gb|AAZ87818.1| flagellar protein for assembly of basal-body periplasmic P ring
[Shigella sonnei Ss046]
Length = 219
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRQDTLPPRTVLDINQLVDAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVTQNARVR 198
>gi|323190583|gb|EFZ75855.1| flagella basal body P-ring formation protein flgA [Escherichia coli
RN587/1]
gi|333004879|gb|EGK24399.1| flagella basal body P-ring formation protein flgA [Shigella
flexneri VA-6]
Length = 156
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 24 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 83
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 84 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135
>gi|157363240|ref|YP_001470007.1| SAF domain-containing protein [Thermotoga lettingae TMO]
gi|157313844|gb|ABV32943.1| SAF domain protein [Thermotoga lettingae TMO]
Length = 219
Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 65/146 (44%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
++F S S S ++ I +GE++ ++ ++ +GN+ ++
Sbjct: 71 IKFYNNRSFAGYVQASALISQPRKILIARRTIKSGEIIKREDVELVEFDVFGKKGNFTNN 130
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
++ V G V+R++ I L L + + G + + G++ + L D + G
Sbjct: 131 LEVVAGKVSRKMFREGEPIDLFYLVKAPDVRAGQVLLAVFETGSVLATALVRVLHDGNFG 190
Query: 124 DVIAVKNIDTGVMVSGSVVDTGTVRV 149
+++ +N+DTG ++ G + T+ +
Sbjct: 191 EIVKARNVDTGFLIQGILRSDYTILI 216
>gi|268317782|ref|YP_003291501.1| flagella basal body P-ring formation protein FlgA [Rhodothermus
marinus DSM 4252]
gi|262335316|gb|ACY49113.1| flagella basal body P-ring formation protein FlgA [Rhodothermus
marinus DSM 4252]
Length = 237
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 48/136 (35%), Gaps = 5/136 (3%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-----SIKDVVGLVTRRV 75
+ + +V + E ++ S L+ + + +R ++ L+ R
Sbjct: 98 YVARYDSVIVARQALRRDEPVDPSALEVVWQETTRLRTPPLTPTRLRQLQRQGPLLAVRS 157
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
+ V+ L PY + G V + +G + + A + +GD I + T
Sbjct: 158 VTAGQVLRADDLRPPYAVQTGETVWMRYRRGGILLRLRCQARAAGFVGDEIELYAPQTRA 217
Query: 136 MVSGSVVDTGTVRVVV 151
G +V G V +
Sbjct: 218 TYRGRIVAPGLVEWIA 233
>gi|304392505|ref|ZP_07374445.1| flagella basal body P-ring formation protein FlgA [Ahrensia sp.
R2A130]
gi|303295135|gb|EFL89495.1| flagella basal body P-ring formation protein FlgA [Ahrensia sp.
R2A130]
Length = 135
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG-NYAHSIKDVVGLVTRRVLLPDH 80
A +VP I GE + S L+ ++V R + +D +G V LL
Sbjct: 5 ALAQDQVLVPVRTIYPGETITASDLRLVEVAAGRERRQGVLRNWEDGIGRVATATLLARR 64
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
I L P+ + G VR+ + +TI T G AL ++G IAV++ +
Sbjct: 65 YIVTRTLVVPHAVKVGEVVRVTFRRAGLTIETKGQALQSGAVGKAIAVRSRGNAKVYQAV 124
Query: 141 VVDTGTVR 148
+ G V
Sbjct: 125 ITAPGMVE 132
>gi|323163753|gb|EFZ49572.1| flagella basal body P-ring formation protein flgA [Escherichia coli
E128010]
gi|323175698|gb|EFZ61292.1| flagella basal body P-ring formation protein flgA [Escherichia coli
1180]
Length = 156
Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 24 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 83
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 84 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 135
>gi|167725926|ref|ZP_02409162.1| flagella basal body P-ring formation protein FlgA [Burkholderia
pseudomallei DM98]
Length = 233
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
+ + A V V + ++A E + L + T +++ + + +G +RR
Sbjct: 89 TKLTARAQVTATIPVAARDLDAREPIAADDLGTARRTLTSLT-DTVTRADEAIGRTSRRS 147
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT 133
L V+ +L P +I RG VRI+ G I GIA+ + DVI ++
Sbjct: 148 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQSGAQDDVIRLRVGTRRD 207
Query: 134 GVMVSGSVVDTGTVRVVVK 152
+V+ V GT + +
Sbjct: 208 AKVVAVRVTGPGTAEPIAQ 226
>gi|170768237|ref|ZP_02902690.1| flagella basal body P-ring formation protein FlgA [Escherichia
albertii TW07627]
gi|170123003|gb|EDS91934.1| flagella basal body P-ring formation protein FlgA [Escherichia
albertii TW07627]
Length = 219
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 46/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + + + V+ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIMRGGKLEADSVKLKRGRLDTLPPRTVLDVNQLADAVSLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L +L + + + G +V +I + + + G AL++A + V+
Sbjct: 147 PDQPIQLPLLRQVWRVKAGQRVNVIASGDGFSANAEGQALNNAGVAQNARVR 198
>gi|158422257|ref|YP_001523549.1| flagellar basal-body P-ring formation protein [Azorhizobium
caulinodans ORS 571]
gi|158329146|dbj|BAF86631.1| flagellar basal-body P-ring formation protein [Azorhizobium
caulinodans ORS 571]
Length = 190
Score = 82.7 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
VP+V I G+ +++S L + + S + R A S + ++G V RR L IP++
Sbjct: 66 PVPAVAIYPGDTISDSMLVDRAYSVSPSDRVAVATSRQALIGKVARRGLQAGTPIPVNAY 125
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
P V+SRG ++L +G +TIS +A+ D S+G ++ +KN+D+G++++G+V G+V
Sbjct: 126 ADPQVVSRGHLAPVVLQEGGLTISGFAMAMEDGSVGKIVRLKNLDSGLIIAGTVQSDGSV 185
Query: 148 RV 149
RV
Sbjct: 186 RV 187
>gi|109948204|ref|YP_665432.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
acinonychis str. Sheeba]
gi|109715425|emb|CAK00433.1| putative flagella basal body P-ring formation protein FlgA
[Helicobacter acinonychis str. Sheeba]
Length = 218
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A + I E + + K+ ++ + S D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSTNTIKKDENITANNTKKERIAFGALSNPLLESAIDKV--SAKV 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ D ++ ++ + + + +G ++I + AL + S+ +I KN+++
Sbjct: 143 FIAADTLLNTDKTQDLIIVRKNDIITGVYEEGRISIEISLKALENGSLNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + V+++
Sbjct: 203 KILKAKVLSSSKVQIL 218
>gi|298735553|ref|YP_003728074.1| flagella basal body P-ring formation protein FlgA [Helicobacter
pylori B8]
gi|298354738|emb|CBI65610.1| flagella basal body P-ring formation protein FlgA [Helicobacter
pylori B8]
Length = 218
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 55/136 (40%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + K+ +V + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSISAIKKDENITANNTKKERVLFGTLSNPLLEGAIDRV--SAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ PD ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPDTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + V+++
Sbjct: 203 KILKAKVLSSSKVQIL 218
>gi|134280881|ref|ZP_01767591.1| flagella basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 305]
gi|134247903|gb|EBA47987.1| flagella basal body P-ring formation protein FlgA [Burkholderia
pseudomallei 305]
Length = 233
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
+ + A V V + ++A E + L + +++ + + +G +RR
Sbjct: 89 TKLTARAQVTATIPVAARDLDAREPIAADDLGTARRILTSLT-DTVTRADEAIGRTSRRS 147
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT 133
L V+ +L P +I RG VRI+ G I GIA+ + + DVI ++
Sbjct: 148 LHAGQVLSRRILQAPELIRRGQTVRIVARVGQAEIVNTGIAMQNGARDDVIRLRVGTRRD 207
Query: 134 GVMVSGSVVDTGTVRVVVK 152
+V+ V GT + +
Sbjct: 208 AKVVAVRVTGPGTAEPIAQ 226
>gi|15612435|ref|NP_224088.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori J99]
gi|4155997|gb|AAD06959.1| putative [Helicobacter pylori J99]
Length = 218
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 55/136 (40%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A + I E + + K+ +V + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSASTIKKDENITANNTKKERVLFGALSNPLLEGAIDKV--SAKH 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ PD ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPDTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALHQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|332758229|gb|EGJ88552.1| flagella basal body P-ring formation protein flgA [Shigella
flexneri 4343-70]
Length = 146
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 14 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLS 73
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 74 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 125
>gi|307638132|gb|ADN80582.1| Flagellar basal-body P ring formation protein [Helicobacter pylori
908]
gi|325996732|gb|ADZ52137.1| Flagellar basal-body P-ring formation protein [Helicobacter pylori
2018]
gi|325998326|gb|ADZ50534.1| putative P-ring biosynthesis protein [Helicobacter pylori 2017]
Length = 218
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A + I E + + K+ +V+ + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSASAIKKDENITANNTKKERVSFGALSNPLLEGAIDKV--SAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ PD ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPDTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|217031821|ref|ZP_03437324.1| hypothetical protein HPB128_199g29 [Helicobacter pylori B128]
gi|216946473|gb|EEC25075.1| hypothetical protein HPB128_199g29 [Helicobacter pylori B128]
Length = 206
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 55/136 (40%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + K+ +V + D V +
Sbjct: 73 RLPVRYSVIGSMQAFKSISAIKKDENITANNTKKERVLFGTLSNPLLEGAIDRV--SAKN 130
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ PD ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 131 FIPPDTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 190
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + V+++
Sbjct: 191 KILKAKVLSSSKVQIL 206
>gi|269792756|ref|YP_003317660.1| flagella basal body P-ring formation protein FlgA
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100391|gb|ACZ19378.1| flagella basal body P-ring formation protein FlgA
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 280
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+ V+ V+ G+V++ R+ S+ +V+G R +
Sbjct: 147 VSLRWHQPVVLARDVMKRGDVVSWERVVLGLGEKRGF-EELPSSVDEVLGRRVRTPVRAW 205
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
V+ S L + G V ++ G +++S G ++ +GD + V N+ T +V+G
Sbjct: 206 AVLRGSWLEGSSGVLGGQTVELVCRVGGVSVSAVGRSVDGGRVGDRVRVMNVQTRAIVTG 265
Query: 140 SVVDTGTVRV 149
V G VRV
Sbjct: 266 VVEAPGVVRV 275
>gi|320179229|gb|EFW54187.1| Flagellar basal-body P-ring formation protein FlgA [Shigella boydii
ATCC 9905]
Length = 219
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 45/110 (40%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V ++ R L
Sbjct: 87 LQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLS 146
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
PD I L+ + + + G +V +I + + + G AL++A++
Sbjct: 147 PDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNAR 196
>gi|317014892|gb|ADU82328.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori Gambia94/24]
Length = 218
Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A + I E + + K+ +V + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSASAIKKDENITANNTKKERVLFGALSNPLLEGAIDRV--SAKH 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ PD ++ + ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPDTLLSMDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|323165579|gb|EFZ51366.1| flagella basal body P-ring formation protein flgA [Shigella sonnei
53G]
Length = 156
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ VV ++ I G L +K + + I +V V+ R L
Sbjct: 24 LQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRQDTLPPRTVLDINQLVDAVSLRDLS 83
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
PD I L+ + + + G +V +I + + + G AL++A++ V+
Sbjct: 84 PDQPIQLTQFRQAWRVKAGQRVNVIASGNGFSANAEGQALNNAAVTQNARVR 135
>gi|283850808|ref|ZP_06368094.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
sp. FW1012B]
gi|283573731|gb|EFC21705.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
sp. FW1012B]
Length = 325
Score = 81.5 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 55/150 (36%), Gaps = 7/150 (4%)
Query: 5 RFLLFFSLYV---LSLDSLFASVIGHAVVPSVVINA--GEVLNESRLKEMQVTNSNIRGN 59
+F++ S V I G + +S + + I+G
Sbjct: 177 KFVVAGSGARILQQVPAEAVVEYFARVPVAIKPIMPKDGAAVEQSAYVYERRNMAGIKGR 236
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
RR + VI + ++ RG +V+++ ++ ++ G ALSD
Sbjct: 237 IFEPGD--SQWRARRGVGAGQVIMADEMEPMPLVLRGDQVKVVYEGRSLRLTLLGEALSD 294
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ G I VKN + ++G V D TV V
Sbjct: 295 GAPGGRITVKNPKSTREITGIVRDRSTVVV 324
>gi|208435345|ref|YP_002267011.1| hypothetical protein HPG27_1400 [Helicobacter pylori G27]
gi|208433274|gb|ACI28145.1| hypothetical protein HPG27_1400 [Helicobacter pylori G27]
Length = 218
Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ ++ + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSISAIKKDENITANNTQKERIPFGTLSNPLLEGAIDKV--SAKH 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSTDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|260429306|ref|ZP_05783283.1| flagella basal body P-ring formation protein FlgA [Citreicella sp.
SE45]
gi|260419929|gb|EEX13182.1| flagella basal body P-ring formation protein FlgA [Citreicella sp.
SE45]
Length = 139
Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
VV + I A EV+ ++ + S+ DVVG + P
Sbjct: 13 VPAQAETVVATRTIRALEVIPPDAVRLDPAEIAGAH----DSLADVVGQEALVAIYPGRP 68
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
+ + + P +I R V +I +G + I+T G AL+ ++G+ I V N+ + + G+V
Sbjct: 69 VLIGTVGIPALIERNQIVELIFAKGALQIATEGRALARGAVGERIRVMNLSSRTTLFGTV 128
Query: 142 VDTGTVRV 149
+ G V V
Sbjct: 129 TEAGAVIV 136
>gi|289523331|ref|ZP_06440185.1| flagella basal body P-ring formation protein FlgA [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503023|gb|EFD24187.1| flagella basal body P-ring formation protein FlgA [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 305
Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
S + I+ L S + + G+ ++G + L
Sbjct: 175 VSWVAPLFTARSRIDFDSTLELSHIAIQT--SKYEGGDIPQYADAILGKKLKTNLEAGSP 232
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
I L + Y++ RG +VR+ + G +++ T AL ++GD+I V N+D+ +S V
Sbjct: 233 IYLHDVEPLYLVKRGDRVRLYVNSGMISVETVAKALDSGALGDIIRVINLDSRRTISAKV 292
Query: 142 VDTGTV 147
G V
Sbjct: 293 AGKGAV 298
>gi|17989430|ref|NP_542063.1| flagellar basal body P-ring biosynthesis protein FlgA [Brucella
melitensis bv. 1 str. 16M]
gi|17985307|gb|AAL54327.1| flagella basal body p ring formation protein flga [Brucella
melitensis bv. 1 str. 16M]
Length = 137
Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
VVPS + G +++++ L E Q + Y S+ VG V R+ LLP I +S L
Sbjct: 13 VVPSATVYPGPIVSDTALLEKQFFINAPAATQYVLSLDQAVGKVARKTLLPGKPILVSAL 72
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
P +++RG ++ T G +TI+ G L GD I V+N+D+G++VSG+V+ G +
Sbjct: 73 GEPSLVTRGIPAPLVFTAGTLTITAMGTPLESGVAGDFIKVRNVDSGIIVSGTVLANGRI 132
Query: 148 RVVVK 152
+V ++
Sbjct: 133 QVGMQ 137
>gi|197104380|ref|YP_002129757.1| distal basal-body ring component protein FlaD [Phenylobacterium
zucineum HLK1]
gi|196477800|gb|ACG77328.1| distal basal-body ring component protein FlaD [Phenylobacterium
zucineum HLK1]
Length = 252
Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ + I AGEV+ + L + + V+G+ RR L +
Sbjct: 114 EVLTWARSIAAGEVIQPADLVW--GKAAAAPADAPSDPDAVIGMAARRPLREGAAVAGRD 171
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ V+ G V + +++S ALS + G+ I V+N + +V V G
Sbjct: 172 IAALEVVKAGEIVTLTFDADGISLSLQAKALSGGAAGETINVQNPSSKKIVQAVVTGPGQ 231
Query: 147 VRV 149
V
Sbjct: 232 AAV 234
>gi|32266858|ref|NP_860890.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
hepaticus ATCC 51449]
gi|32262910|gb|AAP77956.1| hypothetical protein HH_1359 [Helicobacter hepaticus ATCC 51449]
Length = 305
Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 52/126 (41%), Gaps = 1/126 (0%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ + IN + L + ++T + Y S +++ + + D I
Sbjct: 181 TLEVLKSTQNINVNDTLTPQNTRAERITFERVGAEYI-STQEIYNSGAKSYIRVDTAITK 239
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
+ ++ +G K+R+ +G +T +A +A ++I +N ++G ++ + D
Sbjct: 240 DKIKPRIIVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDE 299
Query: 145 GTVRVV 150
G ++
Sbjct: 300 GKGEIL 305
>gi|317010149|gb|ADU80729.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori India7]
Length = 218
Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 53/136 (38%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ +V + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSVSTIKKDENITANNTQKERVLFGALSNPLLEGAIDRV--SAKH 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + + +I KN+++
Sbjct: 143 FIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGAFNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|329901226|ref|ZP_08272751.1| Flagellar basal-body P-ring formation protein flgA
[Oxalobacteraceae bacterium IMCC9480]
gi|327549158|gb|EGF33750.1| Flagellar basal-body P-ring formation protein flgA
[Oxalobacteraceae bacterium IMCC9480]
Length = 245
Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 57/140 (40%), Gaps = 5/140 (3%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+++YV + VI V + + G+++ + + M+ + + +G
Sbjct: 109 WTVYVTAQV----KVIAEYVASAAPLAQGQLVGPNDVIRMRGDLTVLPAGILTDPAQAIG 164
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
L + L V+ +G VR++ + +++T G AL++A+ G + +
Sbjct: 165 RTMAMSLGMGSPLRTDALRIQQVVQQGQAVRLVSSGPGFSVATEGRALNNAAEGQIAQAR 224
Query: 130 NIDTGVMVSGSVVDTGTVRV 149
G +VSG G V V
Sbjct: 225 -TAAGQVVSGVARAGGYVDV 243
>gi|307747679|gb|ADN90949.1| Flagellar basal-body P-ring formation protein FlgA, putative
[Campylobacter jejuni subsp. jejuni M1]
Length = 220
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
F + I G+ L K + + + N + DV LV + + +
Sbjct: 93 FIQANLEVLKSERAIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
++ ++ +I R + +L++ N+ + +AL A++G+ I KN + G ++ G
Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210
Query: 141 VVDTGTVRV 149
VV + +
Sbjct: 211 VVGKNRIII 219
>gi|217033891|ref|ZP_03439315.1| hypothetical protein HP9810_870g23 [Helicobacter pylori 98-10]
gi|216943654|gb|EEC23099.1| hypothetical protein HP9810_870g23 [Helicobacter pylori 98-10]
Length = 211
Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 55/136 (40%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ +V + D V +
Sbjct: 78 RLPVRYSVIGSMQAFKSVGAIKKDENITANNTQKERVLFGVLSNPLLEGAIDKV--SAKN 135
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 136 FIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 195
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + V+++
Sbjct: 196 KILKAKVLSSSKVQIL 211
>gi|210135644|ref|YP_002302083.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori P12]
gi|210133612|gb|ACJ08603.1| flagella basal body P-ring formation protein FlgA [Helicobacter
pylori P12]
Length = 218
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ +V + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSIEAIKKDENITANNTQKERVLFGALSNPLLEGAIDKV--SAKH 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ PD ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPDTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|90415322|ref|ZP_01223256.1| flagellar protein [marine gamma proteobacterium HTCC2207]
gi|90332645|gb|EAS47815.1| flagellar protein [marine gamma proteobacterium HTCC2207]
Length = 400
Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 1/122 (0%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V I G+ + + + N+ + + R L ++ LS
Sbjct: 273 QVLVTQFGIARGQAVTRANIAMQDY-YGNLPQDSLQDYSSAERMQAIRNLPAGSLLRLSD 331
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
L +I +G V+++L G + I+ A AL DA + + + N D+G + G
Sbjct: 332 LTPVNIIRKGDNVQLVLRVGALEITVAMQALEDARMDQRVLLLNPDSGEEIQAIAAGVGR 391
Query: 147 VR 148
R
Sbjct: 392 AR 393
>gi|254779987|ref|YP_003058094.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori B38]
gi|254001900|emb|CAX30153.1| Putative flagellar protein FlgA; putative signal peptide
[Helicobacter pylori B38]
Length = 218
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ +V + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSIEAIKKDENITANNTQKERVLFGALSNPLLEGAIDRV--SAKH 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|308062741|gb|ADO04629.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori Cuz20]
Length = 218
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ +V + + + +
Sbjct: 85 RLPVRYSVIGSMQAFKSVGAIKKDENITANNTQKERVLFGTLSNPLLEGA--INKVSAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|319403962|emb|CBI77550.1| Flagellar protein flgA (fragment) [Bartonella rochalimae ATCC
BAA-1498]
Length = 109
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
Y +K ++ V +R L IPLS L P ++ RG ++I N+ I+ G+ L
Sbjct: 18 YVTDMKQILHKVAKRTLTAGRPIPLSSLGDPVLVERGQATKLIFQTHNLQITALGVVLQS 77
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
S GDVI V+N D+G +V+G+V+ G VRV
Sbjct: 78 GSSGDVIRVRNSDSGRVVTGTVLQNGDVRV 107
>gi|294853177|ref|ZP_06793849.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
gi|294818832|gb|EFG35832.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
Length = 163
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 52/89 (58%)
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
S+ VG V R+ LLP I +S L P +++RG ++ T G +TI+ G L
Sbjct: 1 MLSLDQAVGKVARKTLLPGKPILVSALGEPSLVTRGIPAPLVFTAGTLTITAMGTPLESG 60
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
GD I V+N+D+G++VSG+V+ G ++V
Sbjct: 61 VAGDFIKVRNVDSGIIVSGTVLANGRIQV 89
>gi|108563861|ref|YP_628177.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori HPAG1]
gi|107837634|gb|ABF85503.1| hypothetical protein HPAG1_1436 [Helicobacter pylori HPAG1]
Length = 218
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ ++ + S D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSIEAIKKDENITANNTQKERIPFGVLSNPLLESAIDKV--SAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ PD ++ + ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPDTLLSMDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALHQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|317178182|dbj|BAJ55971.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori F16]
Length = 218
Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ +V + + + +
Sbjct: 85 RLPVRYSVIGSMQAFKSVGAIKKDENITANNTQKERVLFGALSNPLLEGA--INKVSAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|329898293|ref|ZP_08272376.1| flagellar protein [gamma proteobacterium IMCC3088]
gi|328920858|gb|EGG28301.1| flagellar protein [gamma proteobacterium IMCC3088]
Length = 316
Score = 80.0 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
++ + I G+ L+ + + +V L T R L + S
Sbjct: 194 VLISNGSITRGQRLSPELFTP-TIQTEQAPKDALLQGVEVKHLETTRDLTSGEYLRKSNT 252
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
+ +G + + + +G ++I+ A IG+VI ++NID+G +V G VVD G V
Sbjct: 253 KPTLAVRKGEILTLSIVRGMISITAQVRASEGGKIGEVIELENIDSGNLVLGMVVDIGKV 312
Query: 148 RVV 150
++
Sbjct: 313 ELL 315
>gi|291280519|ref|YP_003497354.1| hypothetical protein DEFDS_2151 [Deferribacter desulfuricans SSM1]
gi|290755221|dbj|BAI81598.1| hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 286
Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 55/148 (37%), Gaps = 5/148 (3%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
V FLL + Y + V ++ E+L ++++ +V + IRG
Sbjct: 142 SVYFLLS-TYYHEYRIYAYIRGYKEVYVTKSRVSKNEMLT-DKVEKKRVEITKIRGFPCE 199
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
I +VV ++ + + V+ + + + +G V + N+ I GI +A
Sbjct: 200 KIDNVV---AKKTIPKNRVVTNAYVIQKPDAFKGDYVTVFYKGENVFIKAKGILQENAYR 256
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
+ + N + + + ++
Sbjct: 257 NKYVKIANPSSKKIFFAKYLGGRKAIII 284
>gi|283954337|ref|ZP_06371858.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
414]
gi|283794136|gb|EFC32884.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
414]
Length = 220
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
F + I G+ L K + + + N + DV L+ + + +
Sbjct: 93 FIQANLEVLKSERAIKRGDKLGTFDYKSVLIDFDKVPSNALT-LDDVNNLIAKSNINKNT 151
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
++ ++ +I R + +L++ N+ I +AL A++G+ I KN + G ++ G
Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDILIELVALQSANMGERIRAKNKE-GRVMQGI 210
Query: 141 VVDTGTVRV 149
VV + +
Sbjct: 211 VVGKNRMII 219
>gi|90418391|ref|ZP_01226303.1| putative flagellar basal body P-ring formation protein
[Aurantimonas manganoxydans SI85-9A1]
gi|90338063|gb|EAS51714.1| putative flagellar basal body P-ring formation protein
[Aurantimonas manganoxydans SI85-9A1]
Length = 165
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIR-GNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
VP+ VI G+ + L + + G YA +VG V RR LLP I LS
Sbjct: 40 ELPVPTTVIYPGQSVTGPGLHHKAFYVKDDKIGLYAVDDSALVGRVARRTLLPGKAIRLS 99
Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
L P ++ GA V ++ ++ + I+ G AL A G+ + V+N D+G++VSG V G
Sbjct: 100 DLKEPDLVRAGAAVTLVYSEAGLVITGQGTALRSAGAGETVRVRNADSGIIVSGIVSADG 159
Query: 146 TVRV 149
++R+
Sbjct: 160 SIRI 163
>gi|90422611|ref|YP_530981.1| flagellar basal body P-ring biosynthesis protein FlgA
[Rhodopseudomonas palustris BisB18]
gi|90104625|gb|ABD86662.1| Flageller protein FlgA [Rhodopseudomonas palustris BisB18]
Length = 161
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 10 FSLYVLSLD---SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG--NYAHSI 64
+S ++ S A VP+ VI G+++ + + + N+ G +
Sbjct: 15 WSAAFVATVISASALAEEPARFPVPATVIYPGDLIKDEMIIDRSF-APNLPGVAAFVGDR 73
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
VVG + RR LLP +IP++ L ++SRG+ V++++ G+++I T G +L S G
Sbjct: 74 PAVVGRIARRTLLPGQLIPINALEEQKLVSRGSVVKVVVEDGSLSIVTYGSSLQAGSPGS 133
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVRV 149
+I ++N+DTGV + G V G+VR+
Sbjct: 134 MIQLRNLDTGVTIRGIVQPDGSVRI 158
>gi|261838751|gb|ACX98517.1| hypothetical protein KHP_1328 [Helicobacter pylori 51]
Length = 218
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ +V + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSIGAIKKDENITANNTQKERVLFGALSNPLLEGAIDKV--SAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|317181160|dbj|BAJ58946.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori F32]
Length = 218
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SV+G A I E + + K+ +V + + + +
Sbjct: 85 RLPVRYSVVGSMQAFKSVGAIKKDENITANNTKKERVLFGTLSNPLLEGA--INKVSAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|157415040|ref|YP_001482296.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter jejuni subsp. jejuni 81116]
gi|157386004|gb|ABV52319.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
81116]
gi|315931184|gb|EFV10156.1| flagella basal body P-ring formation protein FlgA [Campylobacter
jejuni subsp. jejuni 327]
Length = 220
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
F + I G+ L K + + + N + DV LV + + +
Sbjct: 93 FIQANLEVLKSERTIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
++ ++ +I R + +L++ N+ + +AL A++G+ I KN + G ++ G
Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210
Query: 141 VVDTGTVRV 149
VV + +
Sbjct: 211 VVGKNRMII 219
>gi|224437628|ref|ZP_03658581.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
cinaedi CCUG 18818]
Length = 319
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 49/124 (39%), Gaps = 1/124 (0%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ I + E L+ ++E + + + SI+++ + + I
Sbjct: 197 RVAKSTQNIPSSENLSLQNVEEDFIKFERVGAEFV-SIEEIQKYSAKSYIRTQMPITKDK 255
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
L ++ +G V + Q ++I T +A + ++I +N D+G ++ +V
Sbjct: 256 LKPRILVKKGDMVSVFNKQEGVSIETLLVAKQSGAYNEIINAQNPDSGKILRIRIVSENK 315
Query: 147 VRVV 150
++
Sbjct: 316 GEIL 319
>gi|15646086|ref|NP_208268.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori 26695]
gi|2314666|gb|AAD08529.1| predicted coding region HP1477 [Helicobacter pylori 26695]
Length = 218
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ ++ + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSVSAIKKDENITANNTQKERILFGALSNPLLEGAIDKV--SAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSTDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|308185247|ref|YP_003929380.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori SJM180]
gi|308061167|gb|ADO03063.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori SJM180]
Length = 218
Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + K+ +V + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSIGAIKKDENITANNTKKERVLFGALSNPLLEGAIDRV--SAKH 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ PD ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPDTLLSTDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|313144080|ref|ZP_07806273.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
cinaedi CCUG 18818]
gi|313129111|gb|EFR46728.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
cinaedi CCUG 18818]
Length = 307
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 49/124 (39%), Gaps = 1/124 (0%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ I + E L+ ++E + + + SI+++ + + I
Sbjct: 185 RVAKSTQNIPSSENLSLQNVEEDFIKFERVGAEFV-SIEEIQKYSAKSYIRTQMPITKDK 243
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
L ++ +G V + Q ++I T +A + ++I +N D+G ++ +V
Sbjct: 244 LKPRILVKKGDMVSVFNKQEGVSIETLLVAKQSGAYNEIINAQNPDSGKILRIRIVSENK 303
Query: 147 VRVV 150
++
Sbjct: 304 GEIL 307
>gi|308183580|ref|YP_003927707.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori PeCan4]
gi|308065765|gb|ADO07657.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori PeCan4]
Length = 218
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ +V + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSMGAIKKDENITANNTQKERVLFGALSNPLLEGAIDKV--SAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGTLNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|149173756|ref|ZP_01852385.1| Flageller protein FlgA [Planctomyces maris DSM 8797]
gi|148847286|gb|EDL61620.1| Flageller protein FlgA [Planctomyces maris DSM 8797]
Length = 383
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 3/133 (2%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
I + +N G V+ L M+ + V+G R +
Sbjct: 206 RIICQLKRIPEILAAKYTLNKGTVVRADDLVWMRPEKDQTG---ITDPRLVIGRELTRTV 262
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
HV+ L +I GA V + +G +++ A +GD I + ++
Sbjct: 263 YQSHVMRSQDLIEVPLIRDGAIVTVYARRGGISVRREMRAQGTGGMGDPITLIALEGRDR 322
Query: 137 VSGSVVDTGTVRV 149
+ +V V
Sbjct: 323 LMATVTGYNQAEV 335
>gi|114797541|ref|YP_758988.1| flagellar basal body P-ring formation protein FlgA [Hyphomonas
neptunium ATCC 15444]
gi|114737715|gb|ABI75840.1| flagellar basal body P-ring formation protein FlgA [Hyphomonas
neptunium ATCC 15444]
Length = 135
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
L+ L + A +++ S VI AG+++ V S G+ A + V+G
Sbjct: 4 LFALGFTAFVALTDASSMIASEVIRAGDIVTP-------VNASAETGDVASMEEPVIGRE 56
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
+R + + + +++R V + G + IST G A+ +AS+ + + V N+
Sbjct: 57 AKRTIYAGQPVTMDNTRPARLVTRNQIVTVKYIHGGLEISTTGRAMGEASLNEPVTVLNL 116
Query: 132 DTGVMVSGSVVDTGTV 147
++ MV G V ++G V
Sbjct: 117 ESRQMVQGIVQESGWV 132
>gi|317182682|dbj|BAJ60466.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori F57]
Length = 218
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + K+ +V + + + +
Sbjct: 85 RLPVRYSVIGSMQAFKSIGAIKKDENITANNTKKERVLFGALSNPLLEGA--IGKVSAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|332296515|ref|YP_004438438.1| flagella basal body P-ring formation protein FlgA
[Thermodesulfobium narugense DSM 14796]
gi|332179618|gb|AEE15307.1| flagella basal body P-ring formation protein FlgA
[Thermodesulfobium narugense DSM 14796]
Length = 225
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESR-LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+ + V V + AG V+N + + + + S + ++A ++ G +
Sbjct: 95 LVRIWLNVYVAKVPLKAGSVINVNDNVVKDERELSTLPKDFAID-DNINGSTLNANIAMG 153
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
VI L ++ + I G +V ++ GN T S +ALS SIGD I V+ I + G
Sbjct: 154 QVIRLGLISKRIDIRLGQRVIVVGKVGNATFSLPAVALSSGSIGDDIKVRCITNNKVFIG 213
Query: 140 SVVDTGTVR 148
++ + V+
Sbjct: 214 KIISSSEVQ 222
>gi|121613741|ref|YP_001000458.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter jejuni subsp. jejuni 81-176]
gi|167005399|ref|ZP_02271157.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter jejuni subsp. jejuni 81-176]
gi|87249319|gb|EAQ72279.1| flagellar basal-body P-ring formation protein FlgA, putative
[Campylobacter jejuni subsp. jejuni 81-176]
Length = 220
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
F + I G+ L K + + + N + DV LV + + +
Sbjct: 93 FIQANLEVLKSERAIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
++ ++ +I R + +L++ N+ + +AL A++G+ I KN + G ++ G
Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210
Query: 141 VVDTGTVRV 149
VV + +
Sbjct: 211 VVGKNRMII 219
>gi|283957249|ref|ZP_06374710.1| flagellar basal-body P-ring formation protein FlgA, putative
[Campylobacter jejuni subsp. jejuni 1336]
gi|283791261|gb|EFC30069.1| flagellar basal-body P-ring formation protein FlgA, putative
[Campylobacter jejuni subsp. jejuni 1336]
Length = 220
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
F + I G+ L K + + + N + DV LV + + +
Sbjct: 93 FIQANLEVLKSERAIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
++ ++ +I R + +L++ N+ + +AL A++G+ I KN + G ++ G
Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210
Query: 141 VVDTGTVRV 149
VV + +
Sbjct: 211 VVGKNRMII 219
>gi|332674247|gb|AEE71064.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori 83]
Length = 218
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ +V + + + +
Sbjct: 85 RLPVRYSVIGSMQAFKSIGAIKKDENITANNTQKERVLFGALSNPLLEGA--IGKVSAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|57167765|ref|ZP_00366905.1| probable periplasmic protein Cj0769c [Campylobacter coli RM2228]
gi|57020887|gb|EAL57551.1| probable periplasmic protein Cj0769c [Campylobacter coli RM2228]
Length = 220
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 2/129 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
F + I G+ L K + + + N ++D L+ + + +
Sbjct: 93 FMQASLEVLKSERSIQRGDKLGAFDYKSVLMDFDKVPSNALA-LEDTHNLIAKSNISKNT 151
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
++ ++ +I R + +L+ GN+ + AL A +G+ I KN + G ++ G
Sbjct: 152 ILKENMFKTMALIRRNDPIIGVLSDGNVDVLIELTALHSADMGERIRAKNKE-GKVMQGI 210
Query: 141 VVDTGTVRV 149
V + +
Sbjct: 211 VTGKNRMII 219
>gi|188528248|ref|YP_001910935.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori Shi470]
gi|188144488|gb|ACD48905.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori Shi470]
gi|308064237|gb|ADO06124.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori Sat464]
Length = 218
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ +V + + + +
Sbjct: 85 RLPVRYSVIGSMQAFKSIGAIKKDENITATNTQKERVLFGALSNPLLEGA--INKVSAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|317179654|dbj|BAJ57442.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori F30]
Length = 218
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 12/117 (10%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Query: 34 VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
I E + + ++ +V + + + + + P+ ++ ++
Sbjct: 104 AIKKDENITANNTQKERVLFGALSNPLLEGA--IGKVSAKNFIPPNTLLSADKTQALIIV 161
Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
+ + + +G ++I + AL + ++ +I KN+++ ++ V+ + +++
Sbjct: 162 RKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL 218
>gi|57237614|ref|YP_178862.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter jejuni RM1221]
gi|86150237|ref|ZP_01068464.1| flagellar basal-body P-ring formation protein FlgA, putative
[Campylobacter jejuni subsp. jejuni CF93-6]
gi|86152102|ref|ZP_01070314.1| flagellar basal-body P-ring formation protein FlgA, putative
[Campylobacter jejuni subsp. jejuni 260.94]
gi|86153344|ref|ZP_01071548.1| flagella basal body P-ring formation protein FlgA [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|88597594|ref|ZP_01100828.1| flagellar basal-body P-ring formation protein FlgA, putative
[Campylobacter jejuni subsp. jejuni 84-25]
gi|148926937|ref|ZP_01810614.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205356737|ref|ZP_03223497.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|218562397|ref|YP_002344176.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|315124292|ref|YP_004066296.1| flagellar basal body P-ring biosynthesis protein [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
gi|57166418|gb|AAW35197.1| flagellar basal-body P-ring formation protein FlgA, putative
[Campylobacter jejuni RM1221]
gi|85839353|gb|EAQ56615.1| flagellar basal-body P-ring formation protein FlgA, putative
[Campylobacter jejuni subsp. jejuni CF93-6]
gi|85840887|gb|EAQ58137.1| flagellar basal-body P-ring formation protein FlgA, putative
[Campylobacter jejuni subsp. jejuni 260.94]
gi|85843070|gb|EAQ60281.1| flagella basal body P-ring formation protein FlgA [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|88190186|gb|EAQ94161.1| flagellar basal-body P-ring formation protein FlgA, putative
[Campylobacter jejuni subsp. jejuni 84-25]
gi|112360103|emb|CAL34897.1| putative flagellar protein FlgA [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|145845021|gb|EDK22118.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205345376|gb|EDZ32019.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|284926015|gb|ADC28367.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter jejuni subsp. jejuni IA3902]
gi|315018014|gb|ADT66107.1| flagellar basal body P-ring biosynthesis protein [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
gi|315058223|gb|ADT72552.1| Flagellar basal-body P-ring formation protein flgA [Campylobacter
jejuni subsp. jejuni S3]
gi|315928304|gb|EFV07620.1| flagella basal body P-ring formation protein FlgA [Campylobacter
jejuni subsp. jejuni DFVF1099]
gi|315929194|gb|EFV08416.1| flagella basal body P-ring formation protein FlgA [Campylobacter
jejuni subsp. jejuni 305]
Length = 220
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
F + I G+ L K + + + N + DV LV + + +
Sbjct: 93 FIQANLEVLKSERAIKRGDKLGAFDYKSVLIDFDKVPLNALT-LDDVDNLVAKSNINKNA 151
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
++ ++ +I R + +L++ N+ + +AL A++G+ I KN + G ++ G
Sbjct: 152 ILRANMFKTTALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKE-GKVMQGI 210
Query: 141 VVDTGTVRV 149
VV + +
Sbjct: 211 VVGKNRMII 219
>gi|317013247|gb|ADU83855.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori Lithuania75]
Length = 218
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 55/136 (40%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + K+ +V + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSVSAIKKDENITANNTKKERVLFGVLSNPLLEGAIDKV--SAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ + ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSMDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|317011612|gb|ADU85359.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori SouthAfrica7]
Length = 218
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 52/136 (38%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVI A I E + K+ ++ + D V +
Sbjct: 85 RLPVRYSVIASMQAFKSISAIKKDENITAHNTKKERIAFGALSNPLLEGAIDKV--SAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ PD ++ ++ + + + +G ++I + AL + S+ +I KN ++
Sbjct: 143 FIPPDTLLNADKTQDLIIVRKNDIITGVYEEGQISIEISLKALENGSLNQIIQAKNAESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + V+++
Sbjct: 203 KILKAKVLSSSKVQIL 218
>gi|304321134|ref|YP_003854777.1| hypothetical protein PB2503_07899 [Parvularcula bermudensis
HTCC2503]
gi|303300036|gb|ADM09635.1| hypothetical protein PB2503_07899 [Parvularcula bermudensis
HTCC2503]
Length = 125
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 11/123 (8%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
V + + AG V++ S L + + +VG R + P I S
Sbjct: 14 VHANARLPAGTVIDGSGLA-----------GNENDVDRLVGRQLTRTIFPGRTISFSDTK 62
Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
++ R + VRI+ +G M I T G AL + G+ I V N+++ ++ + G VR
Sbjct: 63 EADLVDRNSTVRIVAVKGPMRIETKGRALGAGAEGEEILVMNLESRRTITAVISGPGEVR 122
Query: 149 VVV 151
V +
Sbjct: 123 VEL 125
>gi|114762165|ref|ZP_01441633.1| flagellar basal-body P-ring formation protein FlgA [Pelagibaca
bermudensis HTCC2601]
gi|114545189|gb|EAU48192.1| flagellar basal-body P-ring formation protein FlgA [Roseovarius sp.
HTCC2601]
Length = 138
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
VV + + A +++ ++ ++DV+G R L P + +
Sbjct: 19 VVATRTVRAQDIVPADAVRLESADV----PGAHVVLEDVIGQEARVTLYPGRAVMRGAVG 74
Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
P ++ R V +I + + I T G AL A G+ + V N+ + + G+V +GTV
Sbjct: 75 APALVERNQIVELIFARNGLHIVTEGRALDRAGAGERVRVMNLSSRSTLFGTVTASGTVS 134
Query: 149 VV 150
V+
Sbjct: 135 VL 136
>gi|297380668|gb|ADI35555.1| flagella basal body P-ring formation protein FlgA [Helicobacter
pylori v225d]
Length = 218
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + ++ +V + + + +
Sbjct: 85 RLPVRYSVIGSMQAFKSMGAIKKDENITANNTQKERVLFGALSNPLLEGA--INKVSAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSTDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGTLNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|296447437|ref|ZP_06889362.1| flagella basal body P-ring formation protein FlgA [Methylosinus
trichosporium OB3b]
gi|296255057|gb|EFH02159.1| flagella basal body P-ring formation protein FlgA [Methylosinus
trichosporium OB3b]
Length = 149
Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAV-VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
+R L F + + A + P VVI GE + + L E G
Sbjct: 1 MRRALAFVIAAFVACPVVAGAQERMLPTPRVVIYPGEAIRDDMLAERAFN-GGAAGVVVE 59
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ ++G V RR LLPD IP+ + P +++ A+V+I+ +TI G AL +
Sbjct: 60 TRSALIGKVARRTLLPDRPIPVMAVDSPRIVAVNAQVKIVFEVTGLTIVAYGAALQAGGV 119
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVRV 149
GD I V+N D+G++V+G V G++RV
Sbjct: 120 GDFIRVRNQDSGLVVTGRVQPDGSIRV 146
>gi|167628702|ref|YP_001679201.1| hypothetical protein HM1_0585 [Heliobacterium modesticaldum Ice1]
gi|167591442|gb|ABZ83190.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 270
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 56/155 (36%), Gaps = 10/155 (6%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ LF V L + S V + I AGE + +K ++V + N+ N
Sbjct: 14 CIALSLFICFAVTPLFNSGISKKTDIVRVARDIKAGEQITRDMVKTVEVGSYNLPDNVVR 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS- 121
S+ +G + P I + L + + M+++ + S+
Sbjct: 74 SLDAALGKYAAADMAPGDYILNTKLTDSPAAENAYLYNLTGEKQAMSVTI--KSFSNGLS 131
Query: 122 ----IGDVIAVKNIDTGVMVSGSVVDT--GTVRVV 150
GD+++V D + +V+ V V+
Sbjct: 132 GKLISGDIVSVIAPDYRK-MGATVIPPELKYVEVI 165
>gi|153952192|ref|YP_001398303.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter jejuni subsp. doylei 269.97]
gi|152939638|gb|ABS44379.1| putative flagellar basal-body P-ring formation protein FlgA
[Campylobacter jejuni subsp. doylei 269.97]
Length = 220
Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
F + I G+ L K + + + N + DV L+ + + +
Sbjct: 93 FIQANLEVLKSKRAIRRGDKLGAFDYKSILIDFDKVPLNALT-LDDVDNLIAKSNINKNA 151
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
++ ++ +I R + IL++ N+ + +AL A++G+ I KN + G ++ G
Sbjct: 152 ILRANMFKTTALIRRNDPIIGILSEANVDVLIELVALQSANMGERIHAKNKE-GKVMQGI 210
Query: 141 VVDTGTVRV 149
VV + +
Sbjct: 211 VVGKNRMII 219
>gi|24215366|ref|NP_712847.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira
interrogans serovar Lai str. 56601]
gi|45657205|ref|YP_001291.1| flagella basal body P-ring formation protein precursor [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|24196477|gb|AAN49865.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira
interrogans serovar Lai str. 56601]
gi|45600443|gb|AAS69928.1| flagella basal body P-ring formation protein precursor [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 296
Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 48/135 (35%), Gaps = 4/135 (2%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI-KDVVGLVT 72
+ + +N G + +E ++ S +++G
Sbjct: 162 HTLRIRFQVEQMVTVLKAKRSLNQGIKITNEDFQEEEI---FTSEEILDSPGNELLGSTL 218
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
+ + + + + + RG ++ +I +G++ + T ALS +IG+ + V
Sbjct: 219 LKNMNEGEIFRKKHVRKIQDVQRGGEILMIYHKGSLVLKTKVKALSSGNIGEEVQVTTHS 278
Query: 133 TGVMVSGSVVDTGTV 147
+ VVD TV
Sbjct: 279 RENQMKAKVVDKNTV 293
>gi|261840153|gb|ACX99918.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori 52]
Length = 218
Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + K+ ++ + + + +
Sbjct: 85 RLPVRYSVIGSMQAFKSIGAIKKDENITANNTKKERILFGVLSNPLLEGA--IGKVSAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSTDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|315585864|gb|ADU40245.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori 35A]
Length = 218
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 55/136 (40%), Gaps = 4/136 (2%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A I E + + K+ ++ + + + +
Sbjct: 85 RLPVRYSVIGSMQAFKSIGAIKKDENITANNTKKERILFGALSNPLLEGA--INKVSAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
+ P+ ++ + ++ + + + +G ++I + AL + ++ +I KN+++
Sbjct: 143 FIPPNTLLSVDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGTLNQIIQAKNLESN 202
Query: 135 VMVSGSVVDTGTVRVV 150
++ V+ + +++
Sbjct: 203 KILKAKVLSSSKAQIL 218
>gi|217076994|ref|YP_002334710.1| flagella basal body P-ring formation protein FlgA [Thermosipho
africanus TCF52B]
gi|217036847|gb|ACJ75369.1| flagella basal body P-ring formation protein FlgA [Thermosipho
africanus TCF52B]
Length = 310
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 6 FLLFFSLYVLSLDSLFASV------IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
FL+ F+L S + +V I V + IN GE +N + V ++RG
Sbjct: 158 FLVRFALKKDSRTVGYFNVNLIGKCIRKIPVAARNINYGEQVNMDDVAFADVNIFSLRGT 217
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
K + +++R+ + R + G + + + + T AL
Sbjct: 218 PLDVSK--LPMISRKYFKVGEPLFEEYFERVPDVVVGQVIVGYVELPGVIVKTMLRALES 275
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
++GDVI +NI++G +V G +V+ ++VV
Sbjct: 276 GNVGDVIKARNIESGKIVYGLIVEGPMLKVV 306
>gi|160901816|ref|YP_001567397.1| flagellar basal body P-ring biosynthesis protein-like protein
[Petrotoga mobilis SJ95]
gi|160359460|gb|ABX31074.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Petrotoga mobilis SJ95]
Length = 310
Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 55/136 (40%), Gaps = 1/136 (0%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG-LVTRRV 75
S +V S + G +LNE + I G +
Sbjct: 172 TVIANVSKYEEVLVYSKDLTRGTILNEELTEPATKNVLTINNKPVDVELLRSGSYELTKD 231
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
+ ++ + L R + G V +++ + +ST A+++ + GD ++V+N+++G
Sbjct: 232 VKKGEIVDSTYLKRIPDVKPGDIVTVLVEFEGIRVSTLARAMTNGNFGDTLSVRNVESGN 291
Query: 136 MVSGSVVDTGTVRVVV 151
+++G + + + V +
Sbjct: 292 IITGKLKEGPILLVSL 307
>gi|239815250|ref|YP_002944160.1| flagella basal body P-ring formation protein FlgA [Variovorax
paradoxus S110]
gi|239801827|gb|ACS18894.1| flagella basal body P-ring formation protein FlgA [Variovorax
paradoxus S110]
Length = 351
Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 7/146 (4%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRL----KEMQVTNSNIRGNYAHSIK--- 65
+ + + V + + +G ++ L + +V +NI S
Sbjct: 206 VRTTAVTFEVNAWAPLPVATQSMRSGSQVDAVLLRGATESREVDLTNISHGTPVSSSAEL 265
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
D RR L V+ + L + RG + G +++ + L D G +
Sbjct: 266 DAGRQRLRRPLKSGEVLTHAHLEPVPAVVRGNWAHLQARSGAVSVESRVEVLQDGRTGQL 325
Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVV 151
+ VK V V G V V
Sbjct: 326 VRVKVPGASGEVLARVTGPGQVEVQP 351
>gi|154173812|ref|YP_001408259.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter curvus 525.92]
gi|112802783|gb|EAU00127.1| putative flagella basal body P-ring formation protein FlgA
[Campylobacter curvus 525.92]
Length = 268
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 47/124 (37%), Gaps = 2/124 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ I +L+ + + + + + S+ LV R + V+
Sbjct: 147 PVFIAINKIEHNHILSLTDYQSNYIEFEKYQKDMFSSMPS-SRLVARTAIKAGEVLSQRQ 205
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
++ RG + +L G +++ AL D ++GD+I ++ D ++ SV
Sbjct: 206 FSAMSLVKRGDILNAVLNDGGLSVIVEVRALEDGNLGDIIKIRTKD-NKILPASVSGKNQ 264
Query: 147 VRVV 150
V +
Sbjct: 265 VTLR 268
>gi|254473303|ref|ZP_05086700.1| flagella basal body P-ring formation protein FlgA [Pseudovibrio sp.
JE062]
gi|211957419|gb|EEA92622.1| flagella basal body P-ring formation protein FlgA [Pseudovibrio sp.
JE062]
Length = 124
Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRG-NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
P+++I G+ + E L+E ++ + + ++DVVGL RR L P IP + +
Sbjct: 2 PAMMIYPGDKIEEGMLREHGFFKKSVAQLSIVNRMQDVVGLEARRTLFPGKPIPKNAVQD 61
Query: 90 PYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
P V+ RG+ V ++ + + I A +IG I +N DTG+ V G V + G+
Sbjct: 62 PVVVKRGSSVLLVFKEEGLEIRAIVEAQESGAIGANIRARNPDTGLSVLGKVQEDGS 118
>gi|34557026|ref|NP_906841.1| flagellar basal body P-ring biosynthesis protein FlgA [Wolinella
succinogenes DSM 1740]
gi|34482741|emb|CAE09741.1| hypothetical protein WS0610 [Wolinella succinogenes]
Length = 319
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 50/128 (39%), Gaps = 1/128 (0%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
A+ + G+VL+ ++ ++ I + V + + P+ +
Sbjct: 192 IDATLEAIFTKETLKGGDVLDSGSVEIKRIPFERITSEWMR-KDQVGKVSVKSYTSPETL 250
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
+ + V+ RG +R+ + +G +++ + A + ++G I V+N +
Sbjct: 251 LTQDRIIPKIVVRRGDVIRVRIQEGAVSLEFSATAQQEGAVGSKIRVRNEKNKKSYDVKI 310
Query: 142 VDTGTVRV 149
+D T +
Sbjct: 311 IDPMTAII 318
>gi|87306344|ref|ZP_01088491.1| putative flagella basal body P-ring formation protein
[Blastopirellula marina DSM 3645]
gi|87290523|gb|EAQ82410.1| putative flagella basal body P-ring formation protein
[Blastopirellula marina DSM 3645]
Length = 287
Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
V I GEV+ L + G++ I+ +VG R L I +
Sbjct: 140 VVHTVRPIRRGEVIQAEDLTVQPLNTVRTDGDFETRIESLVGKEAIRSLPAQRPIESGSI 199
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDTGV 135
P VI + V +I G + I IA SDAS+GD++ V+ + D+
Sbjct: 200 REPVVIQQNDVVTVIAQIGGLVIRRDAIAASDASVGDLLMVQAISPDSKR 249
>gi|91791416|ref|YP_561067.1| flageller protein FlgA [Shewanella denitrificans OS217]
gi|91713418|gb|ABE53344.1| Flageller protein FlgA [Shewanella denitrificans OS217]
Length = 285
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 55/132 (41%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+L + SV + AG L +S+L + N ++ + RR +
Sbjct: 152 LALELTAKYRTWRASVPLKAGSPLYQSQLTQSWEPLVNSVNLVDLTLDFELDWKARRPIR 211
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ I +L + + G +V I+L G++TI T G AL +G+ + + V
Sbjct: 212 TEQKISRGMLLQASTVEVGDEVMIVLFNGSLTIDTTGRALERGYLGEQVFILVDGAKAPV 271
Query: 138 SGSVVDTGTVRV 149
G +V G V++
Sbjct: 272 KGVIVQKGVVKI 283
>gi|115523180|ref|YP_780091.1| flagellar basal body P-ring biosynthesis protein FlgA
[Rhodopseudomonas palustris BisA53]
gi|115517127|gb|ABJ05111.1| flageller protein FlgA [Rhodopseudomonas palustris BisA53]
Length = 161
Score = 73.8 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQV-TNSNIRGNYAHSIKDVVGLVTRRVLLP 78
A VP I G+++ + + + N + VVG RR LLP
Sbjct: 28 AIAEEPVRFPVPVTTIYPGDLIKDEMIIDRAFAPNMPGVAAFVGDRLTVVGRTARRTLLP 87
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+IP + + +++RG+ V++++ G ++I T G +L G I ++N+DTGV +
Sbjct: 88 GRLIPNNAVEDQKIVNRGSVVKVVIEDGALSIVTYGSSLQSGGPGAFIQLRNLDTGVTIR 147
Query: 139 GSVVDTGTVRV 149
G V G+VR+
Sbjct: 148 GIVQPDGSVRI 158
>gi|305432211|ref|ZP_07401375.1| flagella basal body P-ring formation protein FlgA [Campylobacter
coli JV20]
gi|304444754|gb|EFM37403.1| flagella basal body P-ring formation protein FlgA [Campylobacter
coli JV20]
Length = 127
Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 50/127 (39%), Gaps = 2/127 (1%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+ I G+ L K + + + N ++D L+ + + + ++
Sbjct: 2 QASLEVLKSERSIQRGDKLGAFDYKSVLMDFDKVPSNALA-LEDTHNLIAKSNISKNTIL 60
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVV 142
++ +I R + +L+ GN+ + AL A +G+ I KN + G ++ G V
Sbjct: 61 KENMFKTMALIRRNDPIIGVLSDGNVDVLIELTALHSADMGERIRAKNKE-GKVMQGIVT 119
Query: 143 DTGTVRV 149
+ +
Sbjct: 120 GKNRMII 126
>gi|83646787|ref|YP_435222.1| flagellar basal body P-ring biosynthesis protein [Hahella
chejuensis KCTC 2396]
gi|83634830|gb|ABC30797.1| Flagellar basal body P-ring biosynthesis protein [Hahella
chejuensis KCTC 2396]
Length = 328
Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 1/141 (0%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
L + S +G PS G ++ LK + + A +++
Sbjct: 187 SGVLLNSAPVWFDVSAMGEVWTPSTDAEKGTAVDVHPLKREFIDVAAAGIEPASR-REIE 245
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G R + I VL I G V + + G + + + A+ DA IGD I +
Sbjct: 246 GKEFSRRVESGQPITKDVLRAIPEIKNGDIVFVEVRVGTVFLRSRAEAMHDAYIGDRIKL 305
Query: 129 KNIDTGVMVSGSVVDTGTVRV 149
K++ +G + G V+ G V +
Sbjct: 306 KSVSSGETMLGVVLSAGRVWI 326
>gi|303248238|ref|ZP_07334501.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
fructosovorans JJ]
gi|302490376|gb|EFL50287.1| flagella basal body P-ring formation protein FlgA [Desulfovibrio
fructosovorans JJ]
Length = 324
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 52/150 (34%), Gaps = 7/150 (4%)
Query: 5 RFLLFFS---LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLK--EMQVTNSNIRGN 59
RF++ + + V + + ++ + ++I+G
Sbjct: 176 RFVVAGAGAKILQQIPAEAVVEQFARVPVAIKPVLPRDGAAREQVAYVWERRNMAHIKGR 235
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
RR + +I + +I RG +VR++ + ++ A++D
Sbjct: 236 VFEPGDG--QWRARRGVGTGQIIMADDMEPMPLILRGEQVRVVYQGRGVRLTLLAEAMTD 293
Query: 120 ASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
+ G I VKN + G V D TV V
Sbjct: 294 GAPGGKITVKNPKGNKEIMGVVRDRSTVVV 323
>gi|188997556|ref|YP_001931807.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188932623|gb|ACD67253.1| Flagellar basal body P-ring biosynthesis protein-like protein
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 170
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ + I + + + + KV I+ N+ I G+AL +
Sbjct: 80 YLDCTYLKDEEIVATIPITFRISAT---TKWAVVKNQKVSIVYLNKNIKIQMLGVALENG 136
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
GD I VKNI TG + G V+ TV +
Sbjct: 137 KEGDYIKVKNISTGKELVGKVISNDTVLIEA 167
>gi|157165005|ref|YP_001466855.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter concisus 13826]
gi|112801327|gb|EAT98671.1| putative flagella basal body P-ring formation protein FlgA
[Campylobacter concisus 13826]
Length = 268
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 47/124 (37%), Gaps = 2/124 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ +N +L+ + + S + + LVT+ + ++
Sbjct: 147 PVFIAINSMNTNHILSLLDYQPTMIEFSKWPRDALFGLSAST-LVTKVQIRSGEILTKRQ 205
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ ++ +G + +L++G + I AL D ++GD+I ++ ++ +V
Sbjct: 206 FNAISLVKKGQILNAVLSEGGVKIIAEVKALEDGNLGDMIKIR-TRENKILQATVSGKDE 264
Query: 147 VRVV 150
+
Sbjct: 265 AVIR 268
>gi|224418872|ref|ZP_03656878.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
canadensis MIT 98-5491]
gi|253827826|ref|ZP_04870711.1| flagellar basal body P-ring biosynthesis protein [Helicobacter
canadensis MIT 98-5491]
gi|313142389|ref|ZP_07804582.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
canadensis MIT 98-5491]
gi|253511232|gb|EES89891.1| flagellar basal body P-ring biosynthesis protein [Helicobacter
canadensis MIT 98-5491]
gi|313131420|gb|EFR49037.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
canadensis MIT 98-5491]
Length = 298
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 3/125 (2%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+V I+ G+ + ++ +++ I S + +G V R P V+
Sbjct: 172 DATLEGMVTIDEISGGQTITYQNIRVVEIPFDKIGSELMRSDE--IGKVAVRSYTPKEVL 229
Query: 83 PLSV-LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
L V+ +G K+ + + + + + AL + +IGDVI K ++ V
Sbjct: 230 VTHDRLVAKRVVKKGDKIVVSVQEEGVVLEFVLEALKNGAIGDVIRAKALEGKKTYQVKV 289
Query: 142 VDTGT 146
+D G
Sbjct: 290 IDEGR 294
>gi|309388847|gb|ADO76727.1| flagella basal body P-ring formation protein FlgA [Halanaerobium
praevalens DSM 2228]
Length = 323
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 2/135 (1%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR--RVL 76
+ S+ + + + L +S + + S ++ + R L
Sbjct: 188 PVKISLKTKVLTANKKLARNSKLKKSDFEREEKIVSGNLEKIVRDYAEIDFNKVQLTRDL 247
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
V+ S L PYV+ G K+ + + N+ IST A IGD+I V+N+ TG
Sbjct: 248 NQGEVLNKSYLKIPYVVKWGQKLNLRVKVNNIKISTLVKAKERGKIGDIIKVENLRTGYD 307
Query: 137 VSGSVVDTGTVRVVV 151
V+ V+++
Sbjct: 308 FQVLVISPTEVKLIS 322
>gi|213023590|ref|ZP_03338037.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 133
Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 45/107 (42%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + + G L + + + + I+ + V+ R L
Sbjct: 26 LQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 85
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
P + L+++ + + + G +V++I +++ G A+++A++
Sbjct: 86 PGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQ 132
>gi|309788128|ref|ZP_07682734.1| flagella basal body P-ring formation protein flgA [Shigella
dysenteriae 1617]
gi|308923980|gb|EFP69481.1| flagella basal body P-ring formation protein flgA [Shigella
dysenteriae 1617]
Length = 122
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 43/101 (42%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
+V ++ I G L +K + + I +V V+ R PD I L+
Sbjct: 1 MVAAMPIVRGGKLGAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDPSPDQSIQLTQFR 60
Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+ + + G +V +I + + + G AL++A++ V+
Sbjct: 61 QAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVR 101
>gi|89069817|ref|ZP_01157152.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola
granulosus HTCC2516]
gi|89044618|gb|EAR50734.1| flagellar basal-body P-ring formation protein FlgA [Oceanicola
granulosus HTCC2516]
Length = 136
Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V + I A E++ + L + +VG R + + +
Sbjct: 16 ETLVATRTIRAQEIIAAADLALDAAEFAGGT----SDAALLVGQEARVAIYAGRPVRPAD 71
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
+ P ++ R A + +I +TIST G AL A+ G++I V N+ + V+ + G
Sbjct: 72 VGPPAIVERNAILPLIYNSNGLTISTDGRALDRAASGEIIRVMNLSSRTTVTARIGPDG 130
>gi|16126304|ref|NP_420868.1| distal basal-body ring component protein FlaD [Caulobacter
crescentus CB15]
gi|221235081|ref|YP_002517517.1| flagella basal body P ring formation protein FlgA [Caulobacter
crescentus NA1000]
gi|13637765|sp|P12634|FLAD_CAUCR RecName: Full=Distal basal body ring component protein; Flags:
Precursor
gi|13423544|gb|AAK24036.1| distal basal-body ring component protein FlaD [Caulobacter
crescentus CB15]
gi|220964253|gb|ACL95609.1| flagella basal body P ring formation protein flgA [Caulobacter
crescentus NA1000]
Length = 267
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ + + + ++AGE++ L +++ + + V+GL +
Sbjct: 115 AGARLAGAPRANVEVLAYARSLSAGEIVQPQDLIWVKM--AGAPADAPRDADAVIGLAAK 172
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R L + + + VI G + I G +++S G A++ A+ GDV AV+N +
Sbjct: 173 RPLREGAPVGMKDVAAAQVIKSGDLITITYEDGGISLSLQGKAMAAAAAGDVFAVQNTLS 232
Query: 134 GVMVS 138
++
Sbjct: 233 KKIIQ 237
>gi|331005469|ref|ZP_08328848.1| hypothetical protein IMCC1989_1992 [gamma proteobacterium IMCC1989]
gi|330420745|gb|EGG95032.1| hypothetical protein IMCC1989_1992 [gamma proteobacterium IMCC1989]
Length = 317
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 50/137 (36%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
Y S +V I LN + + GN K +
Sbjct: 180 YQSYRFWYQVSAKQETLVAKNRIETKTPLNIDLFTIDYIDVTTFSGNPVTEYKKLDSRRA 239
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
+V+ + ++L + +++G + + + Q N+ IST IAL +I + I + N
Sbjct: 240 VKVIEKGTALTYNMLEKIPFVTKGQLINVYVRQHNVGISTKAIALKSGNINEKIPMLNPA 299
Query: 133 TGVMVSGSVVDTGTVRV 149
T G++V V V
Sbjct: 300 TKGKYMGTIVGEKQVVV 316
>gi|126734108|ref|ZP_01749855.1| putative flagellar basal-body P-ring formation protein FlgA
[Roseobacter sp. CCS2]
gi|126716974|gb|EBA13838.1| putative flagellar basal-body P-ring formation protein FlgA
[Roseobacter sp. CCS2]
Length = 138
Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
+ VV + I A V+ + + + + ++G+ R L
Sbjct: 13 SPAAAETVVAARTIRAQSVITVDDIIINE----ETTAAAIDAARAIIGMEARVALFVGRP 68
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
I + +P V+ R + ++ + + IST G AL A G+VI V N+ + VS +
Sbjct: 69 ILPGDVGQPAVVERNQIIPLLFEKNGLVISTDGRALGRAGPGEVIRVMNVGSRATVSAMI 128
Query: 142 VDTGTVRV 149
+ G V
Sbjct: 129 GNDGAAYV 136
>gi|330809231|ref|YP_004353693.1| flagella basal body P-ring formation protein flgA [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327377339|gb|AEA68689.1| putative flagella basal body P-ring formation protein flgA
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 232
Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 45/134 (33%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
A V A + L +++ + +V + + + D+ G +
Sbjct: 97 VTVWFKIQAWKQAWVYGRNGRADQALADAQPRLERVDLAAAQLSPGDLPNDLAGQWLTQS 156
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
+ + L ++ R A V +++ + + T G AL +G+ + V
Sbjct: 157 VNAGMPVLKRHLKAEPLVYRDAPVTVVVYGPGLMLRTEGKALRPGVLGERVPVMLDGAES 216
Query: 136 MVSGSVVDTGTVRV 149
+ V G V V
Sbjct: 217 SLLAVVAGKGEVHV 230
>gi|261886408|ref|ZP_06010447.1| flagellar basal body P-ring biosynthesis protein FlgA
[Campylobacter fetus subsp. venerealis str. Azul-94]
Length = 235
Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 41/109 (37%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
+ +V I+ +LN S ++ V+ + L+TR + +
Sbjct: 127 IDANVNVLVAIKDIDRDHILNLSDYEQKSVSLKEYDKEALKEAPKNIKLITRTRIKRGKI 186
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
+ I +G + +L G + I L D ++GD+I V+N
Sbjct: 187 LTNRQFKTLSDIKKGDLINAVLKDGALNIEVLVTELEDGNVGDIIQVRN 235
>gi|116327821|ref|YP_797541.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116331367|ref|YP_801085.1| endoflagellar basal body P-ring biosynthesis protein [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
gi|116120565|gb|ABJ78608.1| Endoflagellar basal body P-ring biosynthesis protein [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116125056|gb|ABJ76327.1| Endoflagellar basal body P-ring biosynthesis protein [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
Length = 294
Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 50/136 (36%), Gaps = 4/136 (2%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI-KDVVGLV 71
+ S ++N G + + KE +V S S +++G
Sbjct: 159 VHTLRIRFQVEQKIKVLKASRLLNKGVKIVKEDFKEEEVLTSE---EILDSPGNELLGST 215
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNI 131
+ + + + + + RG ++ +I +G++ + ALS +IG+ + V
Sbjct: 216 LLKDMNEGEIFRKKHVRKIQDVQRGGEILMIYHKGSLVLKAKVKALSSGNIGEEVQVTAH 275
Query: 132 DTGVMVSGSVVDTGTV 147
+ VVD TV
Sbjct: 276 SREGQLRAKVVDKNTV 291
>gi|144227|gb|AAA23036.1| basal body ring component protein (pot.); putative [Caulobacter
vibrioides]
Length = 267
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ + + + ++AGE++ L +++ + + V+GL +
Sbjct: 115 AGARLAGAPRANVEVLPYARSLSAGEIVQPQDLIWVKM--AGAPADAPRDADAVIGLAAK 172
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R L + + + VI G + I G +++S G A++ A+ GDV AV+N +
Sbjct: 173 RPLREGAPVGMKDVAAAQVIKSGDLITITYEDGGISLSLQGKAMAAAAAGDVFAVQNTLS 232
Query: 134 GVMVS 138
++
Sbjct: 233 KKIIQ 237
>gi|239907791|ref|YP_002954532.1| putative flagella basal body P-ring formation protein FlgA
[Desulfovibrio magneticus RS-1]
gi|239797657|dbj|BAH76646.1| putative flagella basal body P-ring formation protein FlgA
[Desulfovibrio magneticus RS-1]
Length = 350
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 4/137 (2%)
Query: 15 LSLDSLFASVIGHAVVPSVVINA--GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ G V I G + + + + I+G
Sbjct: 215 QAPAEAVVEHFGRVPVAIKNILPKDGAAMEQIAYVYERRNLAGIKGRVFEPGDG--QWRA 272
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
R+ + V+ + +I RG +V++I + ++ A++D + G I VKN
Sbjct: 273 RKGVGTGQVLMADDMEPMPLIVRGDQVKLIYQGRAVRLTMLAEAMTDGAPGGKITVKNSK 332
Query: 133 TGVMVSGSVVDTGTVRV 149
++G V D TV V
Sbjct: 333 FAKEITGLVKDKTTVVV 349
>gi|237755438|ref|ZP_04584063.1| hypothetical protein SULYE_0093 [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237692402|gb|EEP61385.1| hypothetical protein SULYE_0093 [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 170
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ + I + Y I + KV I+ N+ I G+AL +
Sbjct: 80 YLDCTYLKDEEIVATIPITFRISAT---TKYKIVKNQKVGIVYLNKNIKIQMLGVALENG 136
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
GD I VKNI TG + G V+ TV +
Sbjct: 137 KEGDYIKVKNISTGKELVGKVISNDTVLIEA 167
>gi|307721023|ref|YP_003892163.1| flagella basal body P-ring formation protein FlgA [Sulfurimonas
autotrophica DSM 16294]
gi|306979116|gb|ADN09151.1| flagella basal body P-ring formation protein FlgA [Sulfurimonas
autotrophica DSM 16294]
Length = 291
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 2/126 (1%)
Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
+ I L+ ++ + + R + V + L + +I
Sbjct: 167 AAVSVLTARNNIKKDSELSSVNTRKNSIILNKFRAMPLQGL-HVSRYQAKHNLKANDIIT 225
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
+ Y++ RG+ V + L + I + AL + +GD I+V + + VV
Sbjct: 226 SRDVIGLYLVKRGSNVNVSLQNAGIDIFFSAKALQNGRLGDSISVMQKNDKK-LKVVVVG 284
Query: 144 TGTVRV 149
V
Sbjct: 285 RNKAEV 290
>gi|78777321|ref|YP_393636.1| flagellar basal body P-ring biosynthesis protein FlgA [Sulfurimonas
denitrificans DSM 1251]
gi|78497861|gb|ABB44401.1| Flageller protein FlgA [Sulfurimonas denitrificans DSM 1251]
Length = 289
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ L+ S + V R +I L +R + D ++ +
Sbjct: 168 EVYKSKDSLKKDTNLSPSNTFKKSVRLDRFRDKPLQNIYKTS-LQVKRHIQKDAILTIRD 226
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ V+ R + + + + + M I+ + A DA + D+I V+N +G ++ V + +
Sbjct: 227 VEIADVVKRDSNINVTMHRDGMDITFSAKAQKDAKVNDIINVQN-SSGKILKVKVTGSNS 285
Query: 147 VRV 149
+
Sbjct: 286 AEI 288
>gi|291276510|ref|YP_003516282.1| flagellum ring component [Helicobacter mustelae 12198]
gi|290963704|emb|CBG39537.1| Putative flagellum ring component [Helicobacter mustelae 12198]
Length = 221
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 44/123 (35%), Gaps = 1/123 (0%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
V + I + + + + ++ + + D+ + + + +I S++
Sbjct: 100 VVFAKIGIKKSQDITKENTLIKTIPLGALQNSPI-GLSDIDNISAKIFIPSGGMIVNSLV 158
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
+I + I +GNM I IA D + +I N ++ + V+
Sbjct: 159 ANKILIRKNDSFLAIYKEGNMQIQLTLIAKQDGAKDAIIEAYNPESKKTLRVRVLSNAMG 218
Query: 148 RVV 150
++
Sbjct: 219 EIL 221
>gi|160893683|ref|ZP_02074467.1| hypothetical protein CLOL250_01237 [Clostridium sp. L2-50]
gi|156864668|gb|EDO58099.1| hypothetical protein CLOL250_01237 [Clostridium sp. L2-50]
Length = 286
Score = 68.8 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 8/155 (5%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L V L + S V I+ GE + +K ++V + N+ +
Sbjct: 14 CIVLSLIICFAVTPLFNKAMSEKTEIVRVVKPISVGEEITSDMVKTIEVGSYNLPDDVVK 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA-- 120
VVG L P I S + + + ++++ A ++
Sbjct: 74 HSDTVVGAFASADLAPGDYILTSKIAEEPAAENAYLYHLTGEKQAISVT--VKAFANGLS 131
Query: 121 ---SIGDVIAVKNIDTGVMVSGSVVDTGT-VRVVV 151
GD+++V D + V V+
Sbjct: 132 GKLKSGDIVSVIAPDYRKQGKTVIPAELQYVEVIA 166
>gi|149193821|ref|ZP_01870919.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Caminibacter
mediatlanticus TB-2]
gi|149135774|gb|EDM24252.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Caminibacter
mediatlanticus TB-2]
Length = 157
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Query: 27 HAVVPSVVINAGEVLNES-RLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
+ + +I + E+ + + ++ IK L+ +++ + +I
Sbjct: 37 PVFIATTIIKQNSPILENINVIKKEINFKRFYSKPLDKIK--KDLIASKIISKNSIITTL 94
Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
+ ++ RG V + + N+TI+T AL D +IGD+I ++ + VV+
Sbjct: 95 NTKKAPLVLRGENVNVTIKSKNITITTTAKALKDGNIGDIINIE--MNKRIYKAIVVNKN 152
Query: 146 TVR 148
V
Sbjct: 153 QVE 155
>gi|260752880|ref|YP_003225773.1| hypothetical protein Za10_0641 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552243|gb|ACV75189.1| hypothetical protein Za10_0641 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 188
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 8/124 (6%)
Query: 27 HAVVPSVVINAGEVLNESRLKEM-QVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
AVV I ++ L +V HS ++
Sbjct: 68 EAVVVDKPIAGSVSVHCPSLGWRIRVPLVRTASRVLHSRENPQNSQNSGSSK-------E 120
Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTG 145
++ RG V ++ + T+S GIA D ++GD I VK+ + V VV++G
Sbjct: 121 DSKGAILVKRGDPVELVAGNSSFTVSVQGIAQQDGALGDHIRVKSDPSKPPVIAVVVESG 180
Query: 146 TVRV 149
VR+
Sbjct: 181 KVRI 184
>gi|206603524|gb|EDZ40004.1| Hypothetical protein CGL2_11111025 [Leptospirillum sp. Group II
'5-way CG']
Length = 212
Score = 68.1 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 26/60 (43%)
Query: 93 ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
+ G VRI IS GIA GD I+V N +G V +V VR+ +K
Sbjct: 146 VRSGDTVRIQAVGTGFVISLPGIAQESGRNGDQISVFNPMSGSRVQATVTGPDRVRIRLK 205
>gi|124516716|gb|EAY58224.1| protein of unknown function [Leptospirillum rubarum]
Length = 213
Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 68 VGLVTRRVLLPDHVIPLSV--LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
+G R P + L + G VRI IS GIA GD
Sbjct: 120 IGHRFRSSGRPFSKRKNGMKSLEEEEGVRSGDTVRIQAVGTGFVISLPGIAQESGRNGDQ 179
Query: 126 IAVKNIDTGVMVSGSVVDTGTVRVVVK 152
IAV N +G V +V VR+ +K
Sbjct: 180 IAVFNPMSGSRVQATVTGPDRVRIRLK 206
>gi|56551515|ref|YP_162354.1| hypothetical protein ZMO0619 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241761159|ref|ZP_04759248.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|4378864|gb|AAD19732.1| flagellar protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543089|gb|AAV89243.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241374778|gb|EER64239.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 188
Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 49 MQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNM 108
++V HS ++ ++ RG V ++ +
Sbjct: 91 IRVPLVRTASRVLHSRENPQNSQNSGNSK-------EDSKGAILVKRGDPVELVAGNNSF 143
Query: 109 TISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRV 149
T+S GIA D ++GD I VK+ + V VV++G VR+
Sbjct: 144 TVSVQGIAQQDGALGDHIRVKSDPSKPPVIAVVVESGKVRI 184
>gi|46203670|ref|ZP_00209070.1| COG1261: Flagellar basal body P-ring biosynthesis protein
[Magnetospirillum magnetotacticum MS-1]
Length = 99
Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
L V+ + P +++RG V I+ +++S GIA + +G ++V N +
Sbjct: 9 SLSAGSVLRSGDVAPPDLVARGESVNIVFETPGVSLSMRGIANENGRLGASVSVTNSASK 68
Query: 135 VMVSGSVVDTGTVRVVV 151
++ VV G V V
Sbjct: 69 KVLQAVVVGPGRVSVSP 85
>gi|225849136|ref|YP_002729300.1| hypothetical protein SULAZ_1333 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643496|gb|ACN98546.1| hypothetical protein SULAZ_1333 [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 167
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 32/71 (45%)
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ VI + KV I+ G + I G+AL GD I VKNI TG +
Sbjct: 94 YRISQQKDGKLITVIQKNQKVNILYINGPIKIQLLGVALESGKEGDYIKVKNISTGKEIV 153
Query: 139 GSVVDTGTVRV 149
G VVD TV V
Sbjct: 154 GKVVDNQTVLV 164
>gi|302387441|ref|YP_003823263.1| Flp pilus assembly protein CpaB [Clostridium saccharolyticum WM1]
gi|302198069|gb|ADL05640.1| Flp pilus assembly protein CpaB [Clostridium saccharolyticum WM1]
Length = 277
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 10/151 (6%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L + L + + V + I GE + + ++ ++V N+ +
Sbjct: 14 CIVLSLLICFAITPLFNQSITQKTEIVRVTKPIKIGETITKDMVQTVEVGGYNLPEDVVR 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
V+G L P I S + + + +++S + +
Sbjct: 74 HTDTVIGKFASADLAPGDYIIASKIADAPAAENAYLYNLTGEKQAISVS--VKSFAAGLS 131
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGT--VRVVV 151
G +I +G +VS D V V+
Sbjct: 132 GKLI------SGDIVSIVAPDYKKQGVTVIP 156
>gi|153956473|ref|YP_001397238.1| hypothetical protein CKL_3890 [Clostridium kluyveri DSM 555]
gi|219856777|ref|YP_002473899.1| hypothetical protein CKR_3434 [Clostridium kluyveri NBRC 12016]
gi|146349331|gb|EDK35867.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219570501|dbj|BAH08485.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 276
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 10/151 (6%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L V L + S V + I GE + + ++ ++V N+ +
Sbjct: 14 CIVLSLLICFAVTPLFNQSISQKTEIVRVTKPIKIGEAITKDMVQTVEVGGYNLPEDVVR 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
V+G L+P I S + + + +++S + +
Sbjct: 74 HTDTVIGKFASADLVPGDYIIASKIADTPAAENAYLYNLTGKKQAISVS--VKSFAAGLS 131
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGT--VRVVV 151
G +I +G +VS D V V+
Sbjct: 132 GKLI------SGDIVSIVAPDYKKQGVTVIP 156
>gi|218677622|ref|ZP_03525519.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
etli CIAT 894]
Length = 66
Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ Y ++RG+ +R++ + G MTIS AG L D + G +I +N+D+GV+VSG+V+ GT
Sbjct: 1 MREAYTVTRGSSIRLVFSLGAMTISAAGTPLEDGATGQLIRARNMDSGVIVSGTVLADGT 60
Query: 147 VRVVVK 152
+ V K
Sbjct: 61 IHVRAK 66
>gi|254457883|ref|ZP_05071310.1| flageller protein FlgA [Campylobacterales bacterium GD 1]
gi|207085276|gb|EDZ62561.1| flageller protein FlgA [Campylobacterales bacterium GD 1]
Length = 289
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 2/119 (1%)
Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
+ IN L+ + + N +I L + + D VI +
Sbjct: 173 NKKINRDTELSPLNTVKKSILLDNFMAKPIQNIDSNA-LQGKHNIKKDEVITTRDVEILS 231
Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
V+ R + + + L NM+IS + AL D +GD I V+ +G + V +
Sbjct: 232 VVKRDSFIDVSLNSKNMSISFSAKALQDGKLGDTITVQ-KSSGKRLKVRVTGKNRAEMR 289
>gi|89897311|ref|YP_520798.1| hypothetical protein DSY4565 [Desulfitobacterium hafniense Y51]
gi|89336759|dbj|BAE86354.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 277
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 54/153 (35%), Gaps = 6/153 (3%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ LF + L + + V I +G V+ + ++ ++V + N+ N
Sbjct: 14 CIVLSLFICFVLTPLFNQGVARKATVVRVVKDIKSGGVITKDMVQTVEVGSYNLPENVIR 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS-DAS 121
+ V+G LLP I + + + +++S A
Sbjct: 74 QSETVIGKYAEADLLPGDSILTEKVSDTPASENAYLYSLNGDKRAISVSIKSFAQGLSGK 133
Query: 122 I--GDVIAVKNIDTGVMVSGSVVDTGT--VRVV 150
+ GD+++V D +V+ V V+
Sbjct: 134 LISGDIVSVIAPDYKKQ-GATVIPPELTYVEVI 165
>gi|212716655|ref|ZP_03324783.1| hypothetical protein BIFCAT_01588 [Bifidobacterium catenulatum DSM
16992]
gi|212660359|gb|EEB20934.1| hypothetical protein BIFCAT_01588 [Bifidobacterium catenulatum DSM
16992]
Length = 229
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 52/143 (36%), Gaps = 13/143 (9%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
+++ V+ + I G V+ L + N H D VGL
Sbjct: 49 AVFAALQCVRLTISTQPVVIAAQPIAKGSVITADSLALRDLPYDEALRNVFHDCDDAVGL 108
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNMTI---------STAGIALS 118
+ + + ++ ++ V+ G VR+ + N+++ + G A
Sbjct: 109 IAQVDVAEGGIVTSTMARASPVVPEGYTAIEVRLASSADNLSLGDIVTLSSATIFGEATP 168
Query: 119 DASIG-DVIAVKNIDTGVMVSGS 140
+AS D + ++ + +G +++
Sbjct: 169 EASPDTDAVTLRELCSGAILTAK 191
>gi|239817169|ref|YP_002946079.1| flagella basal body P-ring formation protein FlgA [Variovorax
paradoxus S110]
gi|239803746|gb|ACS20813.1| flagella basal body P-ring formation protein FlgA [Variovorax
paradoxus S110]
Length = 237
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 5/148 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C ++ YVL+ +V G +V + I+ G+ L + + +
Sbjct: 92 LRCHSEQKPWTRYVLA----HVAVEGRYLVAARNIDTGQALGAGDFIARNGDLTALPRSV 147
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ ++ G+V + + ++ VI +G ++++ +ST A+S A
Sbjct: 148 VTDLAELQGVVAANRIASGAPLRRELMRGVAVIQQGQTIKVVAEGPGYVVSTEARAMSSA 207
Query: 121 SIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
S G + + +D G MVSG + G VR
Sbjct: 208 SAGAAVRARTVD-GRMVSGVADEEGQVR 234
>gi|296534162|ref|ZP_06896655.1| flagella basal body P-ring formation protein FlgA [Roseomonas
cervicalis ATCC 49957]
gi|296265508|gb|EFH11640.1| flagella basal body P-ring formation protein FlgA [Roseomonas
cervicalis ATCC 49957]
Length = 107
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 44/84 (52%)
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
V+G R L +PLS L + + R + V+++ ++++T+G AL D ++G
Sbjct: 1 DAVLGRRIGRPLGAGQPVPLSELSAQHAVRRDSVVQLVHEASGLSLTTSGRALEDGALGA 60
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVR 148
I + N+ G ++ G V+ G VR
Sbjct: 61 TITILNLSNGAVLLGEVLAPGRVR 84
>gi|89897409|ref|YP_520896.1| hypothetical protein DSY4663 [Desulfitobacterium hafniense Y51]
gi|89336857|dbj|BAE86452.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 286
Score = 65.4 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 46/144 (31%), Gaps = 8/144 (5%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L + L + S V I AG+ + + + ++V N+ +
Sbjct: 26 CIVLSLVICFALTPLFNQSVSQKASVVRVVKEIKAGDAITKDMFQTVEVGEYNLPEDVIK 85
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
V+G L+P I + L + + +++S A
Sbjct: 86 QQDSVLGKYAVADLVPGDYILSAKLSDTPASENAYLYNLSGDKQAISVSIKNFA--GGLS 143
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGT 146
G +I +G +VS D
Sbjct: 144 GKLI------SGDIVSVIAPDYKK 161
>gi|220930147|ref|YP_002507056.1| SAF domain protein [Clostridium cellulolyticum H10]
gi|220000475|gb|ACL77076.1| SAF domain protein [Clostridium cellulolyticum H10]
Length = 294
Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 4/152 (2%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L V L + S V S I AG+ + + ++ ++V + N+
Sbjct: 14 CILLSLVICFAVTPLFNSSISQRTKIVRVSRDIKAGDKITGNMVQIVEVGSYNLPSGVIK 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS-DAS 121
+ D +G + I + L + + M+++ A
Sbjct: 74 NKDDAIGKYASADMKTGDYIFNTKLSAAPAAENSYLYSLNGEKQAMSVTVGSFASGLSGK 133
Query: 122 I--GDVIAVKNIDTGVMVSGSVVDTGT-VRVV 150
+ GD+++V D + + + V V+
Sbjct: 134 LMSGDIVSVIAPDYKNQGTAVIPEELQYVEVI 165
>gi|167769285|ref|ZP_02441338.1| hypothetical protein ANACOL_00608 [Anaerotruncus colihominis DSM
17241]
gi|167668253|gb|EDS12383.1| hypothetical protein ANACOL_00608 [Anaerotruncus colihominis DSM
17241]
Length = 281
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 49/153 (32%), Gaps = 4/153 (2%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L + L + S V I AG+ + ES ++ ++V N+ +
Sbjct: 14 CILLSLLICFGLTPLFNQSVSQKAEIVRVVQPIRAGDEITESMVQIVEVGGYNLPEDVLR 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS-DA- 120
+ VG L I S L + +Q +++S A
Sbjct: 74 QKESAVGKYATADLAVGDYIIPSKLSDAPAAENAYLYSLDGSQQAISVSIKSFAEGLSGK 133
Query: 121 -SIGDVIAVKNIDTGVMVSGSVVDTGT-VRVVV 151
GD+++V D V V ++
Sbjct: 134 LQSGDIVSVIAPDYKQQGQTVVPAELQYVEIIS 166
>gi|302387183|ref|YP_003823005.1| Flp pilus assembly protein CpaB [Clostridium saccharolyticum WM1]
gi|302197811|gb|ADL05382.1| Flp pilus assembly protein CpaB [Clostridium saccharolyticum WM1]
Length = 283
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 57/156 (36%), Gaps = 10/156 (6%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L + L + S V + I GEV+ + ++K ++V N+ N
Sbjct: 14 CIVLSLLICFGLTPLFNKGISQKTEIVRVTKEIKVGEVITQDKVKTVEVGGYNLPENVIR 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA-- 120
+ ++ VG L I + + + + ++ ++I+ + S+
Sbjct: 74 TKENAVGTYALADLSIGDYILNTKVSKTPSAENAYLYHLDGSKQAISITI--KSFSNGLS 131
Query: 121 ---SIGDVIAVKNIDTGVMVSGSVVDT--GTVRVVV 151
GD+++V D +V+ V V+
Sbjct: 132 GKLQSGDIVSVIAPDYKKQ-GATVIPPELKYVEVIS 166
>gi|242309211|ref|ZP_04808366.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pullorum MIT 98-5489]
gi|239524252|gb|EEQ64118.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pullorum MIT 98-5489]
Length = 298
Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
++ + I+ G+ + + +++ + + + +G V R P++V
Sbjct: 171 VDATLEGIITASEISGGQTITYQNSRIVEIPFDKVGSDLMQQGE--LGKVAVRSYTPENV 228
Query: 82 IPLSV-LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGS 140
+ L V+ +G K+ + + + + + AL +A+IGDVI K ++
Sbjct: 229 LVTKDRLIAKRVVKKGDKIIVSVQEEGVILEFILEALKNAAIGDVIKAKALEGKKTYEVK 288
Query: 141 VVDTGT 146
++D G
Sbjct: 289 IIDEGR 294
>gi|226225710|ref|YP_002759816.1| hypothetical protein GAU_0304 [Gemmatimonas aurantiaca T-27]
gi|226088901|dbj|BAH37346.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 181
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV-VGLVTRRVLLPDHVIPLSVLH 88
V + + GE L + + T + G VTRR + V+ +
Sbjct: 61 VAARAMVRGETLQAEDITLVDTTIVWRWSSIDPDTTRPSAGWVTRRAIAAGEVLRAPAVM 120
Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVR 148
P V++ GA V I G + + AG+A + A++G ++V+ ID + G + TVR
Sbjct: 121 APPVVTSGAAVTAIWQDGPLRLVLAGVATNTAAVGAPVSVR-IDRNRRLDGIAIAPNTVR 179
Query: 149 VV 150
+
Sbjct: 180 LR 181
>gi|167772246|ref|ZP_02444299.1| hypothetical protein ANACOL_03621 [Anaerotruncus colihominis DSM
17241]
gi|167665349|gb|EDS09479.1| hypothetical protein ANACOL_03621 [Anaerotruncus colihominis DSM
17241]
Length = 281
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 8/144 (5%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L + L + S V I AG+ + ES ++ ++V N+ +
Sbjct: 14 CIMLSLLICFGLTPLFNQSLSQKAEIVRVVQPIRAGDEITESMVQTVEVGGYNLPEDVLR 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ VG L I S L + +Q +++S + ++
Sbjct: 74 QKESAVGKYATADLAVGDYIIPSKLSDAPAAENAYLYSLDGSQQAISVSI--KSFAEGLS 131
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGT 146
G + +G +VS D
Sbjct: 132 GK------LQSGDIVSVIAPDYKQ 149
>gi|294508676|ref|YP_003572735.1| flagellar protein flgA [Salinibacter ruber M8]
gi|294345005|emb|CBH25783.1| Flagellar protein flgA [Salinibacter ruber M8]
Length = 242
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 5/137 (3%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-----VTR 73
+L + + I G + ++ + S++ G + V
Sbjct: 103 TLRVTRYDSVLTTRSRIKQGAPVKPEDVERTWMRVSDLHGEPLRASAFRAQRKKGALVAD 162
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R L P+ V+ + PY + G + +G ++ + + D++ V DT
Sbjct: 163 RYLRPERVLRARDVRPPYAVDPGTDTDMYYRRGRVSFRLSCTVRETGFVEDLVRVYCPDT 222
Query: 134 GVMVSGSVVDTGTVRVV 150
V V V
Sbjct: 223 RKTYQARVRTAEAVTWV 239
>gi|291457156|ref|ZP_06596546.1| putative flagella basal body P-ring formation protein FlgA
[Bifidobacterium breve DSM 20213]
gi|291380991|gb|EFE88509.1| putative flagella basal body P-ring formation protein FlgA
[Bifidobacterium breve DSM 20213]
Length = 188
Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
C+ + L ++ A V V+ I GE+++ + ++ + S + +Y
Sbjct: 7 RCIAAFCAGLAVLFGLGTVLAQVQTAPVVIADRPIARGEIISSADIRVELLPVSTVGSSY 66
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVR 100
A ++ GL+ + + + I + + G V
Sbjct: 67 ATDADEITGLIAQIDIAVNDPISTHMARDAPLPPTGTTVI 106
>gi|301168506|emb|CBW28096.1| hypothetical protein BMS_3353 [Bacteriovorax marinus SJ]
Length = 297
Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 57/135 (42%), Gaps = 3/135 (2%)
Query: 18 DSLFASVIGHAVVPSVVINA-GEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ + A+VP +I + L++ +E +V N + +I + + +
Sbjct: 165 LNAKLQIKTRALVPKGIIKIDNQPLSKQMFREEEVYTDN-PSSLFTNINTLNFYKVNKSI 223
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVM 136
D + ++ L ++ G ++IL G +++ + L A G+ + +++ +
Sbjct: 224 D-DRAVLINDLVPVSLVKAGIPTKVILDNGIISLKSVATPLRSARFGETVQLRSSKGNKI 282
Query: 137 VSGSVVDTGTVRVVV 151
+ G V+D V V +
Sbjct: 283 IVGKVIDYNKVSVEL 297
>gi|83815670|ref|YP_446740.1| hypothetical protein SRU_2642 [Salinibacter ruber DSM 13855]
gi|83757064|gb|ABC45177.1| hypothetical protein SRU_2642 [Salinibacter ruber DSM 13855]
Length = 242
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 41/137 (29%), Gaps = 5/137 (3%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-----VTR 73
+L + + I G + ++ + S++ G + V
Sbjct: 103 TLRVTRYDSVLTTRSRIKQGAPVKPEDVERTWMRVSDLHGEPLRASAFRAQRKKGALVAD 162
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
R L P+ V+ + PY + G + +G + + + DV+ V T
Sbjct: 163 RYLRPERVLRARDVRPPYAVDPGTDTDMYYRRGRVRFRLSCTVRETGFVEDVVRVYCPGT 222
Query: 134 GVMVSGSVVDTGTVRVV 150
V V V
Sbjct: 223 RKTYQARVRTAEAVTWV 239
>gi|291557188|emb|CBL34305.1| Flp pilus assembly protein CpaB [Eubacterium siraeum V10Sc8a]
Length = 318
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 48/144 (33%), Gaps = 8/144 (5%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L + L + S + + G+ + ++ ++V N+
Sbjct: 14 CIALALIICFAITPLFNASKSSTMKIIRIKNDVKIGQEITSKDIEVVEVGAYNMPSEVLQ 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+DVVG ++ + + + G + + ++I+ + +
Sbjct: 74 KSEDVVGKYAAAEMIKGEYVLSAKVSDTPASENGYLYGLTGEKRAISITIP--SFAGGLS 131
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGT 146
G +I +G +VS VD
Sbjct: 132 GKLI------SGDIVSIIAVDYKE 149
>gi|329888227|ref|ZP_08266825.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
diminuta ATCC 11568]
gi|328846783|gb|EGF96345.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
diminuta ATCC 11568]
Length = 121
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 38/101 (37%)
Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105
+ V + + V+GL +R L + L P VI+R V +
Sbjct: 1 MVWASVQSHLAPAGGPQDAEAVIGLQAKRALRAGSPVGPRDLASPQVIARNDMVEVAYIN 60
Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ ++ G A +AS G+ + + N+ + + V G
Sbjct: 61 DGVELTVTGKATRNASAGEAVPILNVQSNRTIDAVAVAPGR 101
>gi|225351088|ref|ZP_03742111.1| hypothetical protein BIFPSEUDO_02674 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225158544|gb|EEG71786.1| hypothetical protein BIFPSEUDO_02674 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 229
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 52/143 (36%), Gaps = 13/143 (9%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
+++ V+ + I G V+ L + N H D VGL
Sbjct: 49 AMFAALQCVRLTISTQPVVIAAQPIAKGSVITADSLALRDLPYDKALRNVFHDCADAVGL 108
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNMTI---------STAGIALS 118
+ + + ++ ++ V+S G VR+ + N+++ + G A
Sbjct: 109 IAQVDVAEGGIVTSTMARASPVVSEGYTVIEVRLASSADNLSLGDVVTLSSATIFGEATP 168
Query: 119 DASIG-DVIAVKNIDTGVMVSGS 140
+ S D + ++ + +G +++
Sbjct: 169 ETSPDTDAVTLRELCSGAILTAK 191
>gi|134298817|ref|YP_001112313.1| hypothetical protein Dred_0953 [Desulfotomaculum reducens MI-1]
gi|134051517|gb|ABO49488.1| hypothetical protein Dred_0953 [Desulfotomaculum reducens MI-1]
Length = 232
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 6/132 (4%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
VP+ VI AG V+ + + + ++ G V L P I
Sbjct: 41 QETISLPVPAHVIYAGHVITPGDITIRKFLKAAQEPTSIQDTTEITGRVAASDLYPMEQI 100
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG--DVIAVKN----IDTGVM 136
L P I + + + ++ G + + V+ ++N + +
Sbjct: 101 RADKLVPPENILNTGEAYVSIKADSLEQILGGQIQPNMQVDVYHVVDLENAPVLLAKSAI 160
Query: 137 VSGSVVDTGTVR 148
VSG V +G+V
Sbjct: 161 VSGIVGASGSVT 172
>gi|224283683|ref|ZP_03647005.1| hypothetical protein BbifN4_07627 [Bifidobacterium bifidum NCIMB
41171]
Length = 213
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 36/110 (32%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+ + + V VV + +I G + ++ Q+ S+ +
Sbjct: 28 AIAAFATLQCVTASIVTQPVVVAARLIPRGARIGAEDVEIRQMPVSDGWDTALDAANQAA 87
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
G + + + + +++ R V G V + G + AG +
Sbjct: 88 GGIAQTDIAAGQPLFGAIVSRRPVAEPGQTVIDVRVTGTVDGIAAGDVMD 137
>gi|310288050|ref|YP_003939309.1| hypothetical protein BBIF_1530 [Bifidobacterium bifidum S17]
gi|309251987|gb|ADO53735.1| conserved hypothetical protein [Bifidobacterium bifidum S17]
Length = 219
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 36/110 (32%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+ + + V VV + +I G + ++ Q+ S+ +
Sbjct: 34 AIAAFATLQCVTASIVTQPVVVAARLIPRGARIGAEDVEIRQMPVSDGWDTALDAANQAA 93
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
G + + + + +++ R V G V + G + AG +
Sbjct: 94 GGIAQTDIAAGQPLFGAIVSRRPVAEPGQTVIDVRVTGTVDGIAAGDVMD 143
>gi|313672413|ref|YP_004050524.1| flagella basal body p-ring formation protein flga [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939169|gb|ADR18361.1| flagella basal body P-ring formation protein FlgA [Calditerrivibrio
nitroreducens DSM 19672]
Length = 281
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 64/148 (43%), Gaps = 15/148 (10%)
Query: 3 CVRF--LLFFSLYV-------LSLDSLFASVIGHAVVPSVVINAGE-VLNESRLKEMQVT 52
+ F F ++YV + + I GE VL + +KE+QV
Sbjct: 130 SISFPDKPFGTVYVDLSNGIKNYKVYAYIKAFSRGYISDSKIEKGESVLGK--IKEVQVE 187
Query: 53 NSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIST 112
+N++ + + D + + + + VI L ++ + +G KV++I G + +
Sbjct: 188 VTNLKDDLFLNNFDAI---AIQPIPKNRVITLKMVRQMPEKMKGEKVKVIYNNGTIVLEF 244
Query: 113 AGIALSDASIGDVIAVKNIDTGVMVSGS 140
+ + DA G ++VKN+ + +++G
Sbjct: 245 EAVLMDDAYKGGRVSVKNLSSDKVLTGI 272
>gi|311064926|ref|YP_003971652.1| hypothetical protein BBPR_1589 [Bifidobacterium bifidum PRL2010]
gi|313140839|ref|ZP_07803032.1| cation transport ATPase [Bifidobacterium bifidum NCIMB 41171]
gi|310867246|gb|ADP36615.1| Conserved hypothetical protein [Bifidobacterium bifidum PRL2010]
gi|313133349|gb|EFR50966.1| cation transport ATPase [Bifidobacterium bifidum NCIMB 41171]
Length = 219
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 36/110 (32%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+ + + V VV + +I G + ++ Q+ S+ +
Sbjct: 34 AIAAFATLQCVTASIVTQPVVVAARLIPRGARIGAEDVEIRQMPVSDGWDTALDAANQAA 93
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
G + + + + +++ R V G V + G + AG +
Sbjct: 94 GGIAQTDIAAGQPLFGAIVSRRPVAEPGQTVIDVRVTGTVDGIAAGDVMD 143
>gi|258514750|ref|YP_003190972.1| Flp pilus assembly protein CpaB [Desulfotomaculum acetoxidans DSM
771]
gi|257778455|gb|ACV62349.1| Flp pilus assembly protein CpaB [Desulfotomaculum acetoxidans DSM
771]
Length = 286
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 8/144 (5%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L + L + S + I AG+ + + ++ ++V N+ +
Sbjct: 14 CIVLALIICFGLTPLFNQSVSQKAQIIRVVKDIKAGDAITKDMVQTVEVGGYNLPEDVIK 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ +G L P I + L + + +++S A
Sbjct: 74 QQEAALGKYAVADLSPGDYILTAKLSDTPASENAYLYNLNGDKQAISVSIKNFA--GGLS 131
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGT 146
G +I +G +VS D
Sbjct: 132 GKLI------SGDIVSVIAPDYKK 149
>gi|322378357|ref|ZP_08052813.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
suis HS1]
gi|321149214|gb|EFX43658.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
suis HS1]
Length = 221
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
++ + L+ S + ++ + R + P ++ + +
Sbjct: 104 KTMLRKDQNLDASNTYSENIPFTHFNTLPI-DASYINNSSARSFIAPHTILSIDRVGPKI 162
Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD--TGTV 147
+I + L +G + + T+ AL + + VI N+ + +V + G V
Sbjct: 163 LIYKHEIFSATLKEGPLFLETSLQALENGVLNQVIQALNVRSKKVVQVRITGLLKGEV 220
>gi|322380927|ref|ZP_08054998.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
suis HS5]
gi|321146650|gb|EFX41479.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
suis HS5]
Length = 221
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
++ + L+ S + ++ + R + P ++ + +
Sbjct: 104 KTMLRKDQNLDASNTYSENIPFTHFNTLPI-DASYINNSSARSFIAPHTILSIDRVGPKI 162
Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD--TGTV 147
+I + L +G + + T+ AL + + VI N+ + +V + G V
Sbjct: 163 LIYKHEIFSATLKEGPLFLETSLQALENGVLNQVIQALNVRSKKVVQVRITGLLKGEV 220
>gi|119025306|ref|YP_909151.1| hypothetical protein BAD_0288 [Bifidobacterium adolescentis ATCC
15703]
gi|118764890|dbj|BAF39069.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
Length = 266
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 36/101 (35%), Gaps = 3/101 (2%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
+++ A VV + G + ++ + + N H++ D VGL
Sbjct: 66 TVFATLQCVRAAIATQPIVVAVRNVAKGTAITREDVELREAPSDGSLSNAFHTLDDAVGL 125
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNM 108
+ + + V+ + V+ +G VR+ G +
Sbjct: 126 IAQVGIGAHDVLMSGMARASPVVPQGHTSIEVRLASVAGGL 166
>gi|299066529|emb|CBJ37719.1| putative flagellar protein FlgA precursor [Ralstonia solanacearum
CMR15]
Length = 356
Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 3/139 (2%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS---IKDVVGL 70
S S V + +G L++ ++ ++ + + + + V L
Sbjct: 216 RTVPVSFDVSAYERGYVTDLAEASGSPLDQIHMQPKEIDLTALPSKAVLTSLKPEAVANL 275
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
RR + + L + ++RG + G + + + L D G ++ VK
Sbjct: 276 RLRRPMAAGEAVTLDSVESRPAVARGDWATLHAVAGAVNLESRVEVLEDGRNGQLVHVKL 335
Query: 131 IDTGVMVSGSVVDTGTVRV 149
+ + VV V V
Sbjct: 336 PNATSPMLARVVGERMVEV 354
>gi|251795111|ref|YP_003009842.1| SAF domain protein [Paenibacillus sp. JDR-2]
gi|247542737|gb|ACS99755.1| SAF domain protein [Paenibacillus sp. JDR-2]
Length = 237
Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 48/149 (32%), Gaps = 18/149 (12%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
L+ L + +V + AG L E+ + ++ K VG+
Sbjct: 24 LFQLQKLQVTRGETVEVIVAKQFVEAGRRLTEADIAYKRIPREGYEHEMLVDAKQAVGME 83
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI-STAGIALSDA-SIGDVIAV- 128
T L + I + + +++ G + I ++S+ GD + V
Sbjct: 84 TVIPLGTNEPILGWKIDKYHLLPTG-------LESTFQIPRDYVRSISNGIRAGDKVTVY 136
Query: 129 ---KNIDTGVMVS-----GSVVDTGTVRV 149
+N + + SV + V +
Sbjct: 137 LSGENEPSRRIFDSLVTVASVKSSSNVEI 165
>gi|218507130|ref|ZP_03505008.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
etli Brasil 5]
Length = 109
Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/107 (41%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 12 LYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
+ A +G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A SI V GL
Sbjct: 3 AVAGIVVPAGADAGMGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVEGL 62
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
V++R LLP I +S L PY ++RG+ +R++ + G MTIS AG L
Sbjct: 63 VSKRTLLPGRTIAVSGLREPYTVTRGSSIRLVFSLGPMTISAAGTPL 109
>gi|315452623|ref|YP_004072893.1| Flagellar basal body P-ring biosynthesis protein [Helicobacter
felis ATCC 49179]
gi|315131675|emb|CBY82303.1| Flagellar basal body P-ring biosynthesis protein [Helicobacter
felis ATCC 49179]
Length = 223
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
+ L+ S L V + T+ L + ++ + +
Sbjct: 106 KSALKKDTNLDNSVLYAQSVPFERFNTLPI-DSSYINNSSTKSFLGANTLLSVDKVAPKI 164
Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD--TGTV 147
++ + LT G++++ T+ AL + S+ VI N+ + V + G V
Sbjct: 165 LVYKNEIFSATLTSGSISLETSLQALQNGSLNQVIEALNVQSKKRVQVRITGLLKGEV 222
>gi|296122948|ref|YP_003630726.1| flagella basal body P-ring formation protein FlgA [Planctomyces
limnophilus DSM 3776]
gi|296015288|gb|ADG68527.1| flagella basal body P-ring formation protein FlgA [Planctomyces
limnophilus DSM 3776]
Length = 423
Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 42/129 (32%), Gaps = 4/129 (3%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
L + V + GE++ + L + V+G+ RR
Sbjct: 252 VTLKLKLTPQVRMVAFRRAMQKGEIVQQGDLMWK---LDTAQAECCTEPGQVIGMECRRA 308
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT-G 134
++ L L +I G V L + I +LS A+ G+ + + ++D
Sbjct: 309 TKAGELVNLKDLASAPLIRNGDIVTASLRVKGIVIRGQYKSLSTAARGETVTLVSLDDVR 368
Query: 135 VMVSGSVVD 143
V+
Sbjct: 369 ERVTAVATG 377
>gi|229818382|ref|ZP_04448663.1| hypothetical protein BIFANG_03684 [Bifidobacterium angulatum DSM
20098]
gi|229784252|gb|EEP20366.1| hypothetical protein BIFANG_03684 [Bifidobacterium angulatum DSM
20098]
Length = 221
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 2/110 (1%)
Query: 7 LLFFSLYVLSLDSLFASVIGH--AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
+F L V + ++ G V + I G + + M V S + G H+
Sbjct: 35 AMFLCLAVFGVLYSLDAITGTDTIVTAATPIARGTTIRHDDVVMMTVPASPVTGKALHTT 94
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
VG + + + + + + I+ G V I ++ G
Sbjct: 95 DKAVGSIAQHPIEAGQPLYAGSVGKAPTITTGDTVLDIAVANSINALIPG 144
>gi|89892806|ref|YP_516293.1| hypothetical protein DSY0060 [Desulfitobacterium hafniense Y51]
gi|89332254|dbj|BAE81849.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 274
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 8/144 (5%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L V L + S V I AG+ + + ++ ++V + N
Sbjct: 14 CILLSLLICFGVTPLFNKSVSQKTEIVRVVKEIKAGDEITKDTVQTVEVGGFGLPDNVIR 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ V+G + L I + L + T+ M+++ + ++
Sbjct: 74 QSETVIGKYAKSDLSIGDYILNTKLSDTPAAENAYLYNLDGTKQAMSVTI--KSFANGLS 131
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGT 146
G + +G +VS D
Sbjct: 132 GK------LQSGDIVSVIAADYKK 149
>gi|325288260|ref|YP_004264441.1| Flp pilus assembly protein CpaB [Syntrophobotulus glycolicus DSM
8271]
gi|324963661|gb|ADY54440.1| Flp pilus assembly protein CpaB [Syntrophobotulus glycolicus DSM
8271]
Length = 274
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 8/144 (5%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L V L + S V I AG+ + + ++ ++V + N
Sbjct: 14 CILLSLLICFGVTPLFNKSVSQKTEIVRVVKEIKAGDEITKDTVQTVEVGGFGLPDNVIR 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ V+G + L I + L + T+ M+++ + ++
Sbjct: 74 QSEMVIGKYAKSDLSIGDYILNTKLSDTPAAENAYLYNLDGTKQAMSVTI--KSFANGLS 131
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGT 146
G + +G +VS D
Sbjct: 132 GK------LQSGDIVSVIAADHKK 149
>gi|289807482|ref|ZP_06538111.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 84
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
V+ R L P + L+++ + + + G +V++I +++ G A+++A++
Sbjct: 2 QDAVSLRDLAPGQPVQLTMIRQAWRVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNAR 61
Query: 128 VKNIDTGVMVSGSVVDTGTVRVVV 151
V+ + +G +VSG+V G + + +
Sbjct: 62 VR-MTSGQIVSGTVDSDGNILINL 84
>gi|25027510|ref|NP_737564.1| hypothetical protein CE0954 [Corynebacterium efficiens YS-314]
gi|259507082|ref|ZP_05749982.1| secreted protein [Corynebacterium efficiens YS-314]
gi|23492792|dbj|BAC17764.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165360|gb|EEW49914.1| secreted protein [Corynebacterium efficiens YS-314]
Length = 215
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 18/152 (11%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
++ L+ SL S VV S I AG + + L+ ++ + +
Sbjct: 27 LIVAGFLFAGSLISTDP----RVVVFSRDIPAGTEITDQDLELRRIPADLVPDQVIRIPE 82
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVIS--RGAKVRIILTQGNMTISTAGIALSDASI- 122
+ +G +T + + ++S + + L+D SI
Sbjct: 83 EALGRITASSVTAGEWVTAPRFVGTELVSSLTDDIDPAAASTDPFN--MVPLKLADPSII 140
Query: 123 -----GDVIAV--KNIDTGVMVSGSVVDTGTV 147
GD I+V +N DTG + ++ G V
Sbjct: 141 PLLLPGDTISVISQNPDTG--LPATIASGGKV 170
>gi|326204891|ref|ZP_08194744.1| Flp pilus assembly protein CpaB [Clostridium papyrosolvens DSM
2782]
gi|325984940|gb|EGD45783.1| Flp pilus assembly protein CpaB [Clostridium papyrosolvens DSM
2782]
Length = 283
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 7/137 (5%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C+ L V L + S V S I AG+ +N + ++ ++V + N+
Sbjct: 12 VSCILLSLVICFAVTPLFNSSLSQRTSIVRVSRDIKAGDKINGNMVQTVEVGSYNLPSGV 71
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
S DV+ + I ++ L V + + ++++ + +
Sbjct: 72 IKSKDDVIDKYVLADMKEGDYILITKLSAAPVAENSYLHSLNGEKQAISVT--VRSFASG 129
Query: 121 SI-----GDVIAVKNID 132
GD+++V D
Sbjct: 130 LSGKLMPGDIVSVIAPD 146
>gi|251772411|gb|EES52978.1| protein of unknown function [Leptospirillum ferrodiazotrophum]
Length = 217
Score = 58.0 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
++ G V + I +GIA SD +GD + V N +GV +SG V V VV+
Sbjct: 153 MVKAGDNVHVTARGDGFLIRFSGIAQSDGGVGDAVPVVNPVSGVSMSGQVTGRDAVMVVL 212
>gi|254446190|ref|ZP_05059666.1| hypothetical protein VDG1235_4439 [Verrucomicrobiae bacterium
DG1235]
gi|198260498|gb|EDY84806.1| hypothetical protein VDG1235_4439 [Verrucomicrobiae bacterium
DG1235]
Length = 64
Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
++ +G V + G + I+ IA D + GD+I ++NID+ S V+ V
Sbjct: 1 MERALVRKGDVVEVSAVNGLLAITMRAIARQDGTDGDLILLRNIDSAKEFSARVIGENRV 60
Query: 148 RVV 150
V+
Sbjct: 61 EVI 63
>gi|23466106|ref|NP_696709.1| hypothetical protein BL1553 [Bifidobacterium longum NCC2705]
gi|23326839|gb|AAN25345.1| hypothetical protein BL1553 [Bifidobacterium longum NCC2705]
Length = 220
Score = 57.7 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 10/123 (8%)
Query: 7 LLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
L + L+++ A V VV + I G+++ + ++ + S I ++A +I+
Sbjct: 43 LCVGLAVLFGLEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAIGPSWACNIE 102
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
DVVG V + + I + V G V + ++ D GD
Sbjct: 103 DVVGKVAQIDIEAADPISTHMARDAPVAPTGTTVIEVRLASSV---------DDVLAGDQ 153
Query: 126 IAV 128
+ +
Sbjct: 154 VRL 156
>gi|160940635|ref|ZP_02087978.1| hypothetical protein CLOBOL_05529 [Clostridium bolteae ATCC
BAA-613]
gi|158436370|gb|EDP14137.1| hypothetical protein CLOBOL_05529 [Clostridium bolteae ATCC
BAA-613]
Length = 288
Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 3/128 (2%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
+ + + + + S V + G+ + L+ ++V + N+ + A
Sbjct: 13 SILLAAVIAFVAIPVVTKKTSSTLEIVRVVNPLERGQQITAQDLELIEVGSYNLPASVAI 72
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA--GIALSD- 119
++DV G L+P I + + + S A I ++++T ALSD
Sbjct: 73 RLEDVTGTYAAASLMPGDYILPNKVSSSPLSSDPALYSIPDGMVAISVTTQTLATALSDK 132
Query: 120 ASIGDVIA 127
GD+I
Sbjct: 133 LQSGDIIR 140
>gi|224372860|ref|YP_002607232.1| flagella basal body P-ring formation protein FlgA [Nautilia
profundicola AmH]
gi|223589880|gb|ACM93616.1| flagella basal body P-ring formation protein FlgA [Nautilia
profundicola AmH]
Length = 199
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 7/123 (5%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
+ VI+ E++ + + I L+ +++ + VI S
Sbjct: 82 VFKATRVIHLNELVQP-NTTSEIIKFRSFYSQPLTVI--PNNLIASKIISKNAVINRSNT 138
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK-NIDTGVMVSGSVVDTGT 146
+I +G V +I N+ I + G AL+DA++ + + VK N + +G G
Sbjct: 139 KIRPLILKGDSVSVIFKDKNIEIYSKGTALNDANLNENVKVKINT---KIYNGIANKNGE 195
Query: 147 VRV 149
V +
Sbjct: 196 VII 198
>gi|313682363|ref|YP_004060101.1| flagella basal body p-ring formation protein flga [Sulfuricurvum
kujiense DSM 16994]
gi|313155223|gb|ADR33901.1| flagella basal body P-ring formation protein FlgA [Sulfuricurvum
kujiense DSM 16994]
Length = 287
Score = 56.9 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 15/129 (11%), Positives = 44/129 (34%), Gaps = 2/129 (1%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
+ + ++ E L+ + + + SI + R L +
Sbjct: 161 VRATISVLHSNQKVSRKERLSGFNTLLKPIPFVSFKDIPLTSIPN-QPARFRSNLKGGQL 219
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSV 141
+ + + ++ + KV + + + + A + ++ D+I ++ D G V
Sbjct: 220 LTVRNIETIPLVLKNEKVIVEVQDKGVIVEFGARATQEGALYDIITIQKND-GKRAKAKV 278
Query: 142 VDTGTVRVV 150
+ V ++
Sbjct: 279 IGENRVELL 287
>gi|316936686|gb|ADU60339.1| FlgA [Salmonella enterica subsp. enterica serovar Typhimurium]
Length = 132
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 34/87 (39%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ G+ V + I G L + + + + I+ + V+ R L
Sbjct: 46 LQVNVQATGNYVAVAAPIARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVSLRDLA 105
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILT 104
P + L+++ + + + G +V++I
Sbjct: 106 PGQPVQLTMIRQAWRVKAGQRVQVIAN 132
>gi|306823596|ref|ZP_07456971.1| SAF domain protein [Bifidobacterium dentium ATCC 27679]
gi|309802885|ref|ZP_07696986.1| SAF domain protein [Bifidobacterium dentium JCVIHMP022]
gi|304553303|gb|EFM41215.1| SAF domain protein [Bifidobacterium dentium ATCC 27679]
gi|308220352|gb|EFO76663.1| SAF domain protein [Bifidobacterium dentium JCVIHMP022]
Length = 213
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 51/137 (37%), Gaps = 8/137 (5%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
+++ + AVV + I G+ + S + + N H+I DV G+V
Sbjct: 40 VFLGLQCLRSTAETRPAVVTTQRIRRGDTITASVVAVRDIPYDAAWNNAFHTIDDVTGMV 99
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNM-------TISTAGIALSDASIGD 124
+ + ++ ++ +I +G + ++ ++ +G + GD
Sbjct: 100 AQIDIPDGGIVTATMARASPMIPQGHTAVDVRLASSIDELDVGDEVTLSGAVPAQGDAGD 159
Query: 125 V-IAVKNIDTGVMVSGS 140
A++ + + V G
Sbjct: 160 DGGALRELASRATVIGK 176
>gi|296282285|ref|ZP_06860283.1| flagellar protein [Citromicrobium bathyomarinum JL354]
Length = 192
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV--MVSGSVVDTGTVRV 149
V+SRG V I++ G ++S +AL + +IG I V+ + VV G V V
Sbjct: 130 VVSRGETVAIVVEGGGFSLSRQAVALEEGAIGSWIKVRPAQDRKAEPLRAQVVRPGQVAV 189
Query: 150 VVK 152
++
Sbjct: 190 RLR 192
>gi|171741303|ref|ZP_02917110.1| hypothetical protein BIFDEN_00382 [Bifidobacterium dentium ATCC
27678]
gi|283455337|ref|YP_003359901.1| hypothetical protein BDP_0400 [Bifidobacterium dentium Bd1]
gi|171276917|gb|EDT44578.1| hypothetical protein BIFDEN_00382 [Bifidobacterium dentium ATCC
27678]
gi|283101971|gb|ADB09077.1| Hypothetical protein BDP_0400 [Bifidobacterium dentium Bd1]
Length = 213
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 50/137 (36%), Gaps = 8/137 (5%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
+++ AVV + I G+ + S + + N H+I DV G+V
Sbjct: 40 VFLGLQCLRSTVETRPAVVTTQRIRRGDTITASVVAVRDIPYDAAWNNAFHTIDDVTGMV 99
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNM-------TISTAGIALSDASIGD 124
+ + ++ ++ +I +G + ++ ++ +G + GD
Sbjct: 100 AQIDIPDGGIVTATMARASPMIPQGHTAVDVRLASSIDELDVGDEVTLSGAVPAQGDAGD 159
Query: 125 V-IAVKNIDTGVMVSGS 140
A++ + + V G
Sbjct: 160 DGGALRELASRATVIGK 176
>gi|254420864|ref|ZP_05034588.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
sp. BAL3]
gi|196187041|gb|EDX82017.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
sp. BAL3]
Length = 203
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 3/99 (3%)
Query: 48 EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN 107
+V G + + + VI+R VR+ G
Sbjct: 88 LRRVAVRRSTGPV---SAAAAQTDLQASAPQNRPVYRPAGGGQQVIARNDMVRVTYQVGG 144
Query: 108 MTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ +S G A+ +A++G+ +AV N + ++ G
Sbjct: 145 VNLSIMGKAMRNAALGEPVAVLNTASNRVIDAVASGPGQ 183
>gi|329849715|ref|ZP_08264561.1| distal basal body ring component protein [Asticcacaulis
biprosthecum C19]
gi|328841626|gb|EGF91196.1| distal basal body ring component protein [Asticcacaulis
biprosthecum C19]
Length = 193
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 30/51 (58%)
Query: 96 GAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
G + + + G +T++ G+A DA++GD+I ++N + M+ V+ +G
Sbjct: 125 GEAISVTWSSGGLTLTITGVAQKDAAVGDLIQIQNPSSKKMIDAVVIGSGR 175
>gi|289178132|gb|ADC85378.1| hypothetical protein BIF_01377 [Bifidobacterium animalis subsp.
lactis BB-12]
Length = 223
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 39/97 (40%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ + +L+ A+ AVV + ++AG V+ ++ +++ + + +
Sbjct: 41 LALSVGVALFCTLQCVALATATRQAVVAARDLDAGLVIATGDVEMVEMPDHDALRHALGC 100
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVR 100
D VGLVT+ + ++ + + + V
Sbjct: 101 PDDAVGLVTQTRIEKGDILLTTDVGELPQVPEHHTVI 137
>gi|85710157|ref|ZP_01041222.1| hypothetical protein NAP1_14768 [Erythrobacter sp. NAP1]
gi|85688867|gb|EAQ28871.1| hypothetical protein NAP1_14768 [Erythrobacter sp. NAP1]
Length = 182
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
V++RG + I + T+ AG A+ + S GD IAV+ V + G
Sbjct: 118 KAEPVVTRGDPLTIAVRGRGFTVQQAGEAMENGSPGDWIAVRTSRDAQPVRARIERPGLA 177
Query: 148 RVVV 151
+
Sbjct: 178 IIPA 181
>gi|258405292|ref|YP_003198034.1| Flp pilus assembly protein CpaB [Desulfohalobium retbaense DSM
5692]
gi|257797519|gb|ACV68456.1| Flp pilus assembly protein CpaB [Desulfohalobium retbaense DSM
5692]
Length = 295
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 12/138 (8%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
A VV ++ I+AG L E L+ Q N+ ++G V +
Sbjct: 45 APSTQEVVVAALDISAGSQLTEEMLQTGQYLKKNLPPGSFTDPDQLLGRVALAPFKKNEP 104
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAG-IALS-DASI--GDVIAVK----NIDT 133
I + P I G V ++++GN +S G L + G + V + D+
Sbjct: 105 I-VDHRLAPTDIKSGG-VSALISKGNRAVSLGGNKVLGISGFVLPGSRVDVMVTWNDPDS 162
Query: 134 GVMVSGSVVDTGTVRVVV 151
G ++ ++D V+++
Sbjct: 163 GEQITKRILDN--VKILA 178
>gi|239620983|ref|ZP_04664014.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239516084|gb|EEQ55951.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 208
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 10/123 (8%)
Query: 7 LLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
L + L+++ A V VV + I G+++ + ++ + S ++ +I+
Sbjct: 31 LCVGLAVLFGLEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIE 90
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
DVVG V + + I + V G V + ++ D GD
Sbjct: 91 DVVGKVAQIDIEAADPISTHMARDAPVAPTGTTVIEVRLASSV---------DDVLAGDQ 141
Query: 126 IAV 128
+ +
Sbjct: 142 VRL 144
>gi|160941850|ref|ZP_02089177.1| hypothetical protein CLOBOL_06746 [Clostridium bolteae ATCC
BAA-613]
gi|158435347|gb|EDP13114.1| hypothetical protein CLOBOL_06746 [Clostridium bolteae ATCC
BAA-613]
Length = 278
Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 50/136 (36%), Gaps = 8/136 (5%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L L + S V I AG+ + + +++ ++V N+ N
Sbjct: 14 CIVLSLAICFLATPLFNQAISEKTDIVRVQKAIKAGDEITKDKVQMVEVGGYNLPENVMK 73
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ VVG LLP + S + + ++ T+ ++++ + +
Sbjct: 74 DLGSVVGAYATADLLPGDYVLYSKISVQPPGADTYLYQLDGTKQAISVT--VKSFAAGVS 131
Query: 123 GDVIAVKNIDTGVMVS 138
G + +G +VS
Sbjct: 132 GK------LRSGDIVS 141
>gi|294013080|ref|YP_003546540.1| flagellar protein [Sphingobium japonicum UT26S]
gi|292676410|dbj|BAI97928.1| flagellar protein [Sphingobium japonicum UT26S]
Length = 182
Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 33/72 (45%)
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ + R V+ +G V+++ N ++S +A D ++G I V+ G +
Sbjct: 105 ARYAPAARPVAREAVVKKGDPVQLMAGNENFSVSRMMVADEDGAVGQTIRVREDKKGAPI 164
Query: 138 SGSVVDTGTVRV 149
VV+ G VRV
Sbjct: 165 LAQVVEMGIVRV 176
>gi|219682833|ref|YP_002469216.1| cation transport ATPase [Bifidobacterium animalis subsp. lactis
AD011]
gi|219620483|gb|ACL28640.1| cation transport ATPase [Bifidobacterium animalis subsp. lactis
AD011]
Length = 192
Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 39/97 (40%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ + +L+ A+ AVV + ++AG V+ ++ +++ + + +
Sbjct: 10 LALSVGVALFCTLQCVALATATRQAVVAARDLDAGLVIATGDVEMVEMPDHDALRHALGC 69
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVR 100
D VGLVT+ + ++ + + + V
Sbjct: 70 PDDAVGLVTQTRIEKGDILLTTDVGELPQVPEHHTVI 106
>gi|326386924|ref|ZP_08208538.1| hypothetical protein Y88_1562 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208604|gb|EGD59407.1| hypothetical protein Y88_1562 [Novosphingobium nitrogenifigens DSM
19370]
Length = 168
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVD 143
+ VI RG V + +T +S + A+ ++G I V+ V VV
Sbjct: 100 RADPSATPVIQRGQLVTVAVTGDGFAVSQSAEAMEAGAVGAWIRVRTGPKTDPVQARVVR 159
Query: 144 TGTVRV 149
G V V
Sbjct: 160 PGLVEV 165
>gi|227546443|ref|ZP_03976492.1| cation transport ATPase [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|322689956|ref|YP_004209690.1| hypothetical protein BLIF_1777 [Bifidobacterium longum subsp.
infantis 157F]
gi|227213100|gb|EEI80979.1| cation transport ATPase [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|320461292|dbj|BAJ71912.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 189
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 10/123 (8%)
Query: 7 LLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
L + L+++ A V VV + I G+++ + ++ + S ++ +I+
Sbjct: 12 LCVGLAVLFGLEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIE 71
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
DVVG V + + I + V G V + ++ D GD
Sbjct: 72 DVVGKVAQIDIEAADPISTHMARDAPVAPTGTTVIEVRLASSV---------DDVLAGDQ 122
Query: 126 IAV 128
+ +
Sbjct: 123 VRL 125
>gi|312133843|ref|YP_004001182.1| flga [Bifidobacterium longum subsp. longum BBMN68]
gi|311773134|gb|ADQ02622.1| FlgA [Bifidobacterium longum subsp. longum BBMN68]
Length = 189
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 10/123 (8%)
Query: 7 LLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
L + L+++ A V VV + I G+++ + ++ + S ++ +I+
Sbjct: 12 LCVGLAVLFGLEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIE 71
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
DVVG V + + I + V G V + ++ D GD
Sbjct: 72 DVVGKVAQIDIEAADPISTHMARDAPVAPTGTTVIEVRLASSV---------DDVLAGDQ 122
Query: 126 IAV 128
+ +
Sbjct: 123 VRL 125
>gi|183601919|ref|ZP_02963288.1| hypothetical protein BIFLAC_06556 [Bifidobacterium animalis subsp.
lactis HN019]
gi|241190409|ref|YP_002967803.1| hypothetical protein Balac_0354 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241195815|ref|YP_002969370.1| hypothetical protein Balat_0354 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|183218804|gb|EDT89446.1| hypothetical protein BIFLAC_06556 [Bifidobacterium animalis subsp.
lactis HN019]
gi|240248801|gb|ACS45741.1| hypothetical protein Balac_0354 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240250369|gb|ACS47308.1| hypothetical protein Balat_0354 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295793396|gb|ADG32931.1| hypothetical protein BalV_0343 [Bifidobacterium animalis subsp.
lactis V9]
Length = 185
Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 39/97 (40%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ + +L+ A+ AVV + ++AG V+ ++ +++ + + +
Sbjct: 3 LALSVGVALFCTLQCVALATATRQAVVAARDLDAGLVIATGDVEMVEMPDHDALRHALGC 62
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVR 100
D VGLVT+ + ++ + + + V
Sbjct: 63 PDDAVGLVTQTRIEKGDILLTTDVGELPQVPEHHTVI 99
>gi|239908022|ref|YP_002954763.1| Flp pilus assembly CpaB domain protein [Desulfovibrio magneticus
RS-1]
gi|239797888|dbj|BAH76877.1| Flp pilus assembly CpaB domain protein [Desulfovibrio magneticus
RS-1]
Length = 300
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 1/101 (0%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
A+ VV + I G L+ S +K +++ G ++ R + PD
Sbjct: 41 AAPKVEVVVAARAIPKGGRLDASMVKSKGFEAEAAPQGALRDVQEAYGRISARDISPDDP 100
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
I L S G + + TI + + +
Sbjct: 101 ITPDKLMPKGATSGGLDASVAPGKRAFTIKGS-KIMGSGGL 140
>gi|154486709|ref|ZP_02028116.1| hypothetical protein BIFADO_00530 [Bifidobacterium adolescentis
L2-32]
gi|154084572|gb|EDN83617.1| hypothetical protein BIFADO_00530 [Bifidobacterium adolescentis
L2-32]
Length = 206
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 35/101 (34%), Gaps = 3/101 (2%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
+++ A VV + G + ++ + + N H++ D VGL
Sbjct: 6 TVFATLQCVRAAIATQPIVVAVRNVAKGTAITREAVELREAPSDGSLSNAFHTLDDAVGL 65
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNM 108
+ + + V+ + V+ +G VR+ +
Sbjct: 66 IAQVGIGAHDVLMSGMARASPVVPQGHTSIEVRLASVADGL 106
>gi|103488384|ref|YP_617945.1| flagellar protein [Sphingopyxis alaskensis RB2256]
gi|98978461|gb|ABF54612.1| flagellar protein [Sphingopyxis alaskensis RB2256]
Length = 170
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
P V+ RG VR+ + N +IS A IA+ D +GD IA++ D +
Sbjct: 97 PVAAPFARAAPSAPVVRRGDHVRVSIDTPNYSISYAAIAVEDGRVGDSIALRGSDRKSTL 156
Query: 138 SGSVVDTGTVRV 149
S +V G R+
Sbjct: 157 SATVTGPGAARI 168
>gi|225872753|ref|YP_002754210.1| putative flp pilus assembly protein CpaB [Acidobacterium capsulatum
ATCC 51196]
gi|225791215|gb|ACO31305.1| putative flp pilus assembly protein CpaB [Acidobacterium capsulatum
ATCC 51196]
Length = 271
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 30/157 (19%)
Query: 10 FSLYVLSLDSLFASVIGH---AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
F+L + + A + + I GEV+ + +K + + + KD
Sbjct: 19 FTLLLGRKLTHSAHRAAPQKQYMAAARPIAVGEVIQAADVKTILWPANLPLQGGMATTKD 78
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVI 126
V+G + I + L P G+ + I N IAL DVI
Sbjct: 79 VIGRAAIFPVTVGQPILSTDLAAP-----GSSLGITTRIPN---GMRAIAL---HTDDVI 127
Query: 127 AV----------------KNIDTGVMVSGSVVDTGTV 147
AV +N + ++ +V+ V
Sbjct: 128 AVGGFIFPGSHVDVLVTYRNPGSPQPITATVLQNALV 164
>gi|317483025|ref|ZP_07942027.1| SAF domain-containing protein [Bifidobacterium sp. 12_1_47BFAA]
gi|316915526|gb|EFV36946.1| SAF domain-containing protein [Bifidobacterium sp. 12_1_47BFAA]
Length = 208
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 10/123 (8%)
Query: 7 LLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
L + ++++ A V VV + I G+++ + ++ + S ++ +I+
Sbjct: 31 LCVGLAVLFGIEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIE 90
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
DVVG V + + I + V G V + ++ D GD
Sbjct: 91 DVVGKVAQIDIEAADPISTHMARDAPVAPTGTTVIEVRLASSV---------DDVLAGDQ 141
Query: 126 IAV 128
+ +
Sbjct: 142 VRL 144
>gi|225017400|ref|ZP_03706592.1| hypothetical protein CLOSTMETH_01326 [Clostridium methylpentosum
DSM 5476]
gi|224949810|gb|EEG31019.1| hypothetical protein CLOSTMETH_01326 [Clostridium methylpentosum
DSM 5476]
Length = 290
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 4/128 (3%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAV-VPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
C+ + + L + AV V + VI G + ++ S + + A
Sbjct: 16 CILLAVLVCFGITPLFNAGLKAQTEAVRVKAEVIPRGTYITADMVEVYTRGASGMPDSIA 75
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL-SDA 120
S+ +VVG T L + + L + ++ ++ ++++ A
Sbjct: 76 TSLDEVVGRYTDVELRKNTDVNTGWLSSEPLTQYEYLTKLDGSKVAISVTIPTFAKGGSG 135
Query: 121 SI--GDVI 126
+ GD+I
Sbjct: 136 KVEAGDII 143
>gi|46190327|ref|ZP_00121647.2| COG2217: Cation transport ATPase [Bifidobacterium longum DJO10A]
gi|189440534|ref|YP_001955615.1| Flagellar basal body P-ring biosynthesis protein [Bifidobacterium
longum DJO10A]
gi|189428969|gb|ACD99117.1| Flagellar basal body P-ring biosynthesis protein [Bifidobacterium
longum DJO10A]
Length = 189
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 10/123 (8%)
Query: 7 LLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
L + ++++ A V VV + I G+++ + ++ + S ++ +I+
Sbjct: 12 LCVGLAVLFGIEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIE 71
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
DVVG V + + I + V G V + ++ D GD
Sbjct: 72 DVVGKVAQIDIEAADPISTHMARDAPVAPTGTTVIEVRLASSV---------DDVLAGDQ 122
Query: 126 IAV 128
+ +
Sbjct: 123 VRL 125
>gi|322691896|ref|YP_004221466.1| hypothetical protein BLLJ_1707 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320456752|dbj|BAJ67374.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 189
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 10/123 (8%)
Query: 7 LLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
L + ++++ A V VV + I G+++ + ++ + S ++ +I+
Sbjct: 12 LCVGLAVLFGIEAVLAVVETEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIE 71
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
DVVG V + + I + V G V + ++ D GD
Sbjct: 72 DVVGKVAQIDIEAADPISTHMARDAPVAPTGTTVIEVRLASSV---------DDVLAGDQ 122
Query: 126 IAV 128
+ +
Sbjct: 123 VRL 125
>gi|291516490|emb|CBK70106.1| Flagellar basal body P-ring biosynthesis protein [Bifidobacterium
longum subsp. longum F8]
Length = 189
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 10/123 (8%)
Query: 7 LLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
L + ++++ A V VV + I G+++ + ++ + S ++ +I+
Sbjct: 12 LCVGLAVLFGIEAVLAVVKTEPMVVAARSIRRGDIILAADVQLADMPVSAAGPSWTGNIE 71
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
DVVG V + + I + V G V + ++ D GD
Sbjct: 72 DVVGKVAQIDIEAADPISTHMARDAPVAPTGTTVIEVRLASSV---------DDVLAGDQ 122
Query: 126 IAV 128
+ +
Sbjct: 123 VRL 125
>gi|213693112|ref|YP_002323698.1| SAF domain protein [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|296454899|ref|YP_003662043.1| SAF domain-containing protein [Bifidobacterium longum subsp. longum
JDM301]
gi|213524573|gb|ACJ53320.1| SAF domain protein [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|296184331|gb|ADH01213.1| SAF domain protein [Bifidobacterium longum subsp. longum JDM301]
Length = 208
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 7 LLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
L + L+++ A V VV + I G+++ ++ + S I ++A +I+
Sbjct: 31 LCVGLAVLFGLEAVLAVVETEPMVVAARSIRRGDIILAVDVQLAAMPVSAIGPSWAGNIE 90
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVR 100
DVVG V + + I + V G V
Sbjct: 91 DVVGKVAQIDIEAADPISTHMARDAPVTPTGTTVI 125
>gi|148554195|ref|YP_001261777.1| hypothetical protein Swit_1274 [Sphingomonas wittichii RW1]
gi|148499385|gb|ABQ67639.1| hypothetical protein Swit_1274 [Sphingomonas wittichii RW1]
Length = 191
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ +G V+++ + +IS A+ DA IG + V G + V+D G
Sbjct: 125 ASANAAVRKGDPVQLVAQGSSFSISVDATAMEDADIGRRVRVATNSKGSTIFAEVIDVGR 184
Query: 147 VRVV 150
VR++
Sbjct: 185 VRLI 188
>gi|325067747|ref|ZP_08126420.1| hypothetical protein AoriK_07996 [Actinomyces oris K20]
Length = 250
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 30/106 (28%), Gaps = 9/106 (8%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+V S I+AG VL E + + + + S VG L V+
Sbjct: 11 ERGQQVLVASRSISAGAVLTEQDVSISNLPAGALPQSPLTSAGQAVGSRAAISLEKGTVL 70
Query: 83 PLSVLHRPYVISRGA---------KVRIILTQGNMTISTAGIALSD 119
S+ G V L + + G A D
Sbjct: 71 TASMTSGYLAQQLGDDERLVQVPVDVGAELARPGARVDIIGQASED 116
>gi|168699692|ref|ZP_02731969.1| hypothetical protein GobsU_09224 [Gemmata obscuriglobus UQM 2246]
Length = 282
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 28/60 (46%)
Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
++ +V + ++ + + G A SD +G + V+N ++ +V V G + + +
Sbjct: 218 LVRARQRVEVSVSSVGLKMIMTGEAQSDGLLGQTVMVQNSESKKLVPAKVTGAGKLVIEL 277
>gi|303248301|ref|ZP_07334563.1| Flp pilus assembly protein CpaB [Desulfovibrio fructosovorans JJ]
gi|302490326|gb|EFL50238.1| Flp pilus assembly protein CpaB [Desulfovibrio fructosovorans JJ]
Length = 304
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 35/111 (31%), Gaps = 4/111 (3%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V + I G L+ + L+ + G ++ + G V R + D I
Sbjct: 47 DVLVAARAIPKGARLDAAMLRLKPYEAEAVPGGALRAVAEAEGRVAARDISKDDPITPDK 106
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI---GDVIAVKNIDTG 134
L V G + + +T+ + + G + V +
Sbjct: 107 LMAKGVTRGGLDAAVAPGKRAVTVKGT-KVMGSGGLVTPGSRVDVVVTYSR 156
>gi|91783010|ref|YP_558216.1| putative signal peptide protein, CpaB like [Burkholderia xenovorans
LB400]
gi|91686964|gb|ABE30164.1| Putative signal peptide protein, CpaB like protein [Burkholderia
xenovorans LB400]
Length = 316
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 43/157 (27%), Gaps = 23/157 (14%)
Query: 4 VRFLLFFSL---YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
V L ++L + VV + + G+ + L+ + +
Sbjct: 18 VLGLFAWTLSRRPAPVAVTPAVHASFPVVVATRALAPGKPITVDDLRIQSLPIN--PNGA 75
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV-------------ISRGAKVRIILTQGN 107
+ G V + D + S L + G V L GN
Sbjct: 76 FTEPAQLAGRVPNAEIGADSPVLESQLSSGLAERVEVGERALAVRVDEGNAVGNRLRPGN 135
Query: 108 -----MTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
T+ G ++ + D + + + V V
Sbjct: 136 FVDVFFTLKRDGGSMGNGGEIDRTQARLLMSKVRVLA 172
>gi|302383957|ref|YP_003819780.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
subvibrioides ATCC 15264]
gi|302194585|gb|ADL02157.1| flagella basal body P-ring formation protein FlgA [Brevundimonas
subvibrioides ATCC 15264]
Length = 210
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 33/101 (32%)
Query: 46 LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105
+ + + + G + P VI+R V + +
Sbjct: 91 VVVREASLAPATGGNTAVAATIPTTTLPPPAPTVSAPPQRQARAARVIARNDMVEVAYSV 150
Query: 106 GNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
G + ++ G A DA+ G+ + + N+ +G + G
Sbjct: 151 GGVMLTVTGRATRDAAAGESVPILNVASGRTIDAVATGPGR 191
>gi|51245388|ref|YP_065272.1| hypothetical protein DP1536 [Desulfotalea psychrophila LSv54]
gi|50876425|emb|CAG36265.1| hypothetical protein DP1536 [Desulfotalea psychrophila LSv54]
Length = 285
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 32/115 (27%), Gaps = 6/115 (5%)
Query: 4 VRFLLFFSLYVLSLDSLFA------SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57
+ F + F +Y V ++ G + ++ +
Sbjct: 16 IAFSVSFVVYKKMSTPNVVMEQKPGQATTDIAVAVKDMSRGSKIGSEDVQMATYLQETLP 75
Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIST 112
+ ++ VVG + L I S L + G I T+ M I
Sbjct: 76 SGHFTDLEQVVGRIVLSPLTTTEPILNSDLAPQDLTKGGLAAVITPTKRAMAIKV 130
>gi|296158793|ref|ZP_06841622.1| Flp pilus assembly protein CpaB [Burkholderia sp. Ch1-1]
gi|295890998|gb|EFG70787.1| Flp pilus assembly protein CpaB [Burkholderia sp. Ch1-1]
Length = 316
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 43/157 (27%), Gaps = 23/157 (14%)
Query: 4 VRFLLFFSL---YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
V L ++L + VV + + G+ + L+ + +
Sbjct: 18 VLGLFAWTLSRRPAPVAVTPATHASFPVVVATRALAPGKPITVDDLRIQSLPIN--PNGA 75
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV-------------ISRGAKVRIILTQGN 107
+ G V + D + S L + G V L GN
Sbjct: 76 FTEPAQLAGRVPNAEIGADSPVLESQLSSGLAERVEAGERALAVRVDEGNAVGNRLRPGN 135
Query: 108 -----MTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
T+ G ++ + D + + + V V
Sbjct: 136 FVDVFFTLKRDGGSMGNGGEIDRTQARLLMSKVRVLA 172
>gi|283852072|ref|ZP_06369346.1| Flp pilus assembly protein CpaB [Desulfovibrio sp. FW1012B]
gi|283572462|gb|EFC20448.1| Flp pilus assembly protein CpaB [Desulfovibrio sp. FW1012B]
Length = 300
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 30/104 (28%), Gaps = 1/104 (0%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
+ +V + + G L+ + ++ +VVG VT R +
Sbjct: 39 PAAETKKIEVLVAARPLAKGARLDTTMVRLKPYDPEAAPLGAMRDASEVVGRVTAREISQ 98
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
D I L G + + +T+ + +
Sbjct: 99 DDPITPDKLLPKGAAGGGLDASVEPGKRALTVKGT-KVMGSGGL 141
>gi|307293793|ref|ZP_07573637.1| flagellar protein [Sphingobium chlorophenolicum L-1]
gi|306879944|gb|EFN11161.1| flagellar protein [Sphingobium chlorophenolicum L-1]
Length = 182
Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV 137
+ + R V+ +G V+++ + ++S +A D ++G I V+ +
Sbjct: 105 ARYAPAARPIAREAVVKKGDPVQLMAGNASFSVSRMMVADEDGAVGQTIRVREDKKAAPI 164
Query: 138 SGSVVDTGTVRV 149
VV+ G VRV
Sbjct: 165 LAQVVEMGIVRV 176
>gi|320459290|dbj|BAJ69911.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 172
Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 32/81 (39%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
L VV + I G+++ ++ + S I ++A +I+DVVG V + +
Sbjct: 9 LAVVETEPMVVAARSIRRGDIILAVDVQLAAMPVSAIGPSWAGNIEDVVGKVAQIDIEAA 68
Query: 80 HVIPLSVLHRPYVISRGAKVR 100
I + V G V
Sbjct: 69 DPISTHMARDAPVTPTGTTVI 89
>gi|326773108|ref|ZP_08232392.1| flp pilus assembly protein CpaB [Actinomyces viscosus C505]
gi|326637740|gb|EGE38642.1| flp pilus assembly protein CpaB [Actinomyces viscosus C505]
Length = 261
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 38/126 (30%), Gaps = 14/126 (11%)
Query: 7 LLFFSLYVLSLDSLFASVIGH-----AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
++ L L +L G +V S I+AG +L + + + + +
Sbjct: 1 MVALCLGTAVLVALSVLRPGPQRGQQVLVASHAISAGAILTDQDVSISTLPTGALPQSPL 60
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVL---------HRPYVISRGAKVRIILTQGNMTIST 112
S + VG L V+ S+ ++ V L + +
Sbjct: 61 TSTEQAVGNRAAISLEKGTVLTASMTSGSLAQQLGDDERLVQVAIDVGAELARPGARVDI 120
Query: 113 AGIALS 118
G A
Sbjct: 121 IGQAPE 126
>gi|270284475|ref|ZP_05966188.2| putative hemagglutinin-related protein [Bifidobacterium gallicum
DSM 20093]
gi|270276969|gb|EFA22823.1| putative hemagglutinin-related protein [Bifidobacterium gallicum
DSM 20093]
Length = 257
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 41/111 (36%), Gaps = 9/111 (8%)
Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG------NYA 61
+ +YV+ + VV I G V+ + ++ Q ++ G + A
Sbjct: 11 VALLVYVVLGAVMGLHATRQVVVARHTIERGSVIGATDVQYQQFPATDSAGSTTPWADAA 70
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK---VRIILTQGNMT 109
++ V + + + V+ L ++ + V+ G V++ +T
Sbjct: 71 DDLQLVSNHIAQFTITAGSVVFLDMVAQQPVLQAGQTIVDVQLASRSQALT 121
>gi|283769331|ref|ZP_06342230.1| Flp pilus assembly protein CpaB [Bulleidia extructa W1219]
gi|283103988|gb|EFC05372.1| Flp pilus assembly protein CpaB [Bulleidia extructa W1219]
Length = 228
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 48/109 (44%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
++F +L+++S + + V S I A + + E L+ +V + + A + +
Sbjct: 16 MVFLALFLISSSAGRGAQSTAVYVASKNIKANQQITEDMLEYKKVPGNLVVEGAAKNKDE 75
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115
++G + + +L + VI +++ + + ++ +G IS
Sbjct: 76 LLGKMAKVDILKNSVISKENVYKEGEPEKNGGLTYVIAKGKRAISFPVE 124
>gi|85859140|ref|YP_461342.1| flp pilus assembly protein [Syntrophus aciditrophicus SB]
gi|85722231|gb|ABC77174.1| flp pilus assembly protein [Syntrophus aciditrophicus SB]
Length = 295
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 40/132 (30%), Gaps = 4/132 (3%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ + VV + + VL + ++ ++ Y +VG +
Sbjct: 31 TATAKAKPQEMQKVVVAAFDVPWSTVLTKDMVRTATFLKESLPNGYYLDPAQIVGRTVIQ 90
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVKNID 132
+ + I + L + + G I ++ M++ + I G+ + V
Sbjct: 91 PIRTNEPITEARLAPTSIRTGGVAAVITPSKRAMSVKVDKVVGVSGYIHPGNRVDVLVTL 150
Query: 133 TGVMVSGSVVDT 144
G V
Sbjct: 151 NEQ--RGEVTAP 160
>gi|256833036|ref|YP_003161763.1| SAF domain-containing protein [Jonesia denitrificans DSM 20603]
gi|256686567|gb|ACV09460.1| SAF domain protein [Jonesia denitrificans DSM 20603]
Length = 241
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 47/140 (33%), Gaps = 11/140 (7%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
L+ S+++ + + A V + + G+ + E+ L+ + V NY
Sbjct: 36 LVALSVWIGAWALDSGRTLDTAFVAARTLQPGDAITEADLQAVDVELGQHLNNYLTPETM 95
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILT-------QGNMTISTAGIALS 118
GLV + ++ ++ + V I + + A A
Sbjct: 96 GEGLVAVVPVHQGQLVAVTSTGSAADVDSRIMAVPITGQLPAQVVPGSTIDLWYAPEATP 155
Query: 119 DASIGDVIAVKNIDTGVMVS 138
+GD V +G+ VS
Sbjct: 156 TGEVGDPDQV---ASGLTVS 172
>gi|253577450|ref|ZP_04854765.1| SAF domain-containing protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843150|gb|EES71183.1| SAF domain-containing protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 377
Score = 50.3 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 12/123 (9%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V + I AG+ L ++ ++V ++ + + + VVG + + L + + S+
Sbjct: 65 RILVAARPIPAGKTLGNGDIQAVEVVHALVPSDSFKDPQMVVGKIAKIDLQSNTPLIASM 124
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK-NIDTGVMVSGSVVDTG 145
L+ I R L + L V+ V+ N TG V+
Sbjct: 125 LYEEGAIPRD------LRMQEFNVIQLPTHLQ---KDQVVDVRINFPTGEDY--IVLSKK 173
Query: 146 TVR 148
VR
Sbjct: 174 KVR 176
>gi|303241416|ref|ZP_07327919.1| SAF domain protein [Acetivibrio cellulolyticus CD2]
gi|302591025|gb|EFL60770.1| SAF domain protein [Acetivibrio cellulolyticus CD2]
Length = 255
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 53/136 (38%), Gaps = 8/136 (5%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ LF + + + + S + GEV+ ++L+ ++V N+ N
Sbjct: 16 CIVLSLFICFILTPMFNSGLKAQTEIIRISSDMKKGEVIAGNKLEVVKVGAYNLPQNIIK 75
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+DVVG L+ I S + ++ + T+ M+I+ + +
Sbjct: 76 RKEDVVGKYVNCDLMKGDYILSSKVTDKPLLEFEYLNDLDGTKVAMSITI--KSFAAGLS 133
Query: 123 GDVIAVKNIDTGVMVS 138
G +++G +V+
Sbjct: 134 GK------LESGDIVT 143
>gi|237733157|ref|ZP_04563638.1| predicted protein [Mollicutes bacterium D7]
gi|229383701|gb|EEO33792.1| predicted protein [Coprobacillus sp. D7]
Length = 229
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 11/143 (7%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ + ++ + SL +F +V + + A + ES +V +++ NY
Sbjct: 8 ISLIIIIVAGLILSGSLFMIFVGNTTEVLVATQDVKANTKIKESMFTTERVDTASLPDNY 67
Query: 61 AH--SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
S KDVVG T VI S + + GA + +G ++ + L
Sbjct: 68 LSADSAKDVVGYYTYIGFTKGSVISKSNIATSAKKASGA-----IEKGKTLLTISAENLP 122
Query: 119 DA-SIGDVIAVK---NIDTGVMV 137
GD + + N D+G V
Sbjct: 123 TGIQSGDKVNIIIGANTDSGNKV 145
>gi|168703131|ref|ZP_02735408.1| flp pilus assembly protein [Gemmata obscuriglobus UQM 2246]
Length = 442
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 17/144 (11%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRL----KEMQVTNSNIRGNYAHSI 64
+ ++ + S VV + + G +L + L K ++ + +
Sbjct: 17 LVAAFLTAQMSAKPIEQMEVVVAAKDLPVGTMLGKEDLKAAVKIVKRPKEGLPPTVVLNP 76
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
+++V R + + VI L + VI+ ++ Q AG A + +G
Sbjct: 77 EELVDKRLSRPIRAEEVINSQDLSKGGVITLPEGYHMVSLQLG-----AGQA-AAGFVG- 129
Query: 125 VIAVKNIDTGVMVSGSVVDTGTVR 148
+ V V ++ +
Sbjct: 130 ------PGSRVNVHATMRLGNKIE 147
Score = 40.3 bits (93), Expect = 0.083, Method: Composition-based stats.
Identities = 6/67 (8%), Positives = 19/67 (28%), Gaps = 5/67 (7%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR----GNYAHSIKDVVGLVTRRVLLPDH 80
+ +V I + L + + + G + + +G R +
Sbjct: 279 MVKVLVAKSDIKPNTEITA-DLIREEFEEATLPKQFAGGALGDLNEALGQFLRTGVAKGQ 337
Query: 81 VIPLSVL 87
+ ++
Sbjct: 338 WVTPGMV 344
>gi|149184201|ref|ZP_01862519.1| hypothetical protein ED21_25823 [Erythrobacter sp. SD-21]
gi|148831521|gb|EDL49954.1| hypothetical protein ED21_25823 [Erythrobacter sp. SD-21]
Length = 88
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG---VMVSGSVVDTGTVR 148
+I RG V I+ T++ G A D + G I V+ +G + V+ G V
Sbjct: 27 MIKRGETVSILARGKGFTLTRHGSAAEDGAQGQWIKVR--ASGERLETLRAVVLGPGKVG 84
Query: 149 VVV 151
+ +
Sbjct: 85 IDL 87
>gi|329943872|ref|ZP_08292143.1| Flp pilus assembly protein CpaB [Actinomyces sp. oral taxon 170
str. F0386]
gi|328531578|gb|EGF58414.1| Flp pilus assembly protein CpaB [Actinomyces sp. oral taxon 170
str. F0386]
Length = 362
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 23/145 (15%)
Query: 7 LLFFSLYVLSLDSLFASV--IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
L+ F L + ++S+ + V + V + + + L E+ ++ +V HS
Sbjct: 133 LVTFGLVLSYVNSVASQVGPMTTVVTLTRDVESLTSLTEADVEVKEVPKRWAPNGALHSF 192
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA-KVRIILTQGNMTISTAGIALSDASIG 123
K+ GLVT ++ +L P + G +V II+ G
Sbjct: 193 KETSGLVTAGTYHKGDMLQSGMLESPPGLQSGYREVAIIVDA------------ETGVAG 240
Query: 124 DVIAVKNIDTGVMVS--GSVVDTGT 146
I +G V +V D T
Sbjct: 241 K------ISSGETVDIIATVEDPNT 259
>gi|332088756|gb|EGI93868.1| flagella basal body P-ring formation protein flgA [Shigella boydii
5216-82]
Length = 90
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 33/69 (47%)
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
I +V ++ R L PD I L+ + + + G +V +I + + + G AL++A
Sbjct: 1 MLDINQLVDAISLRDLSPDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNA 60
Query: 121 SIGDVIAVK 129
++ V+
Sbjct: 61 AVAQNARVR 69
>gi|294786498|ref|ZP_06751752.1| LPXTG-motif cell wall anchor domain protein [Parascardovia
denticolens F0305]
gi|315226071|ref|ZP_07867859.1| conserved hypothetical protein [Parascardovia denticolens DSM
10105]
gi|294485331|gb|EFG32965.1| LPXTG-motif cell wall anchor domain protein [Parascardovia
denticolens F0305]
gi|315120203|gb|EFT83335.1| conserved hypothetical protein [Parascardovia denticolens DSM
10105]
Length = 274
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 31/84 (36%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
FL+ + L L S A V + I+ G+ ++ + ++++ + + S
Sbjct: 74 FLISLMAFCLIQIGLTVSSNQSAFVAARDISQGQEIHPGDIAQVRMRTNPLATRTVKSAS 133
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHR 89
V+G L + + +
Sbjct: 134 AVLGRRAAIPLRKGDPLVPTAVKA 157
>gi|94495417|ref|ZP_01301997.1| flagellar protein [Sphingomonas sp. SKA58]
gi|94424805|gb|EAT09826.1| flagellar protein [Sphingomonas sp. SKA58]
Length = 193
Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ V+ +G V+++ + ++S IA ++GD I V+ V +VD G
Sbjct: 125 APKEDVVRKGDPVQLMAGNASFSVSRMMIADEGGAVGDTIRVREDRKSPPVFAQIVDMGV 184
Query: 147 VRV 149
VR+
Sbjct: 185 VRI 187
>gi|266619843|ref|ZP_06112778.1| Flp pilus assembly protein CpaB [Clostridium hathewayi DSM 13479]
gi|288868552|gb|EFD00851.1| Flp pilus assembly protein CpaB [Clostridium hathewayi DSM 13479]
Length = 283
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 50/144 (34%), Gaps = 8/144 (5%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L + + + V + I GE + + + ++ N+ N +
Sbjct: 15 CIVVSLLICFGITPMFNDALKSKVTLVRVTKEIRTGEQITDKMVTSVEAVGYNLPSNVIY 74
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
I++VVG L I S L ++ ++ +++S + +
Sbjct: 75 KIEEVVGKYANADLYKGDYILKSKLSDTPMLRNAYLNKLNGENRAISVSI--KSFASGLS 132
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGT 146
G ++ G +VS D G+
Sbjct: 133 GK------LEAGDIVSLIAADVGS 150
>gi|302387867|ref|YP_003823689.1| SAF domain protein [Clostridium saccharolyticum WM1]
gi|302198495|gb|ADL06066.1| SAF domain protein [Clostridium saccharolyticum WM1]
Length = 283
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 47/146 (32%), Gaps = 8/146 (5%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
C+ L + + + V + I G+ + + ++ N+ + +
Sbjct: 15 CIITALIICFGLTPMFNNALQSKVELVRVTTEIKKGDEITAGMITAVETGGYNLPSDVIY 74
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+DV+G L I S L + + T ++++ + +
Sbjct: 75 KKEDVIGKFANADLYKGDYILKSKLSDTPQLKNEYLSGLDGTNRAISVTI--KSFAAGLS 132
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGTVR 148
G ++ G +VS D G R
Sbjct: 133 GK------LERGDIVSLIASDVGEAR 152
>gi|229587502|ref|YP_002860540.1| SAF domain family [Clostridium botulinum Ba4 str. 657]
gi|229260297|gb|ACQ51334.1| SAF domain family [Clostridium botulinum Ba4 str. 657]
Length = 208
Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 4 VRFLLFFSLYVLSLDSLF---ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
++F + L++ L + S +V IN G+++ E ++ +++N N+ +
Sbjct: 5 LKFGVIGILFLFVLFYIILKNVSGTTKVIVLKNDINKGKIITEQDVETKEISNKNVLPDI 64
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIIL 103
+ KD+VG + L + IP ++ + + +V + +
Sbjct: 65 VLNQKDIVGKSLKVDRLQNDFIPKKIIGDTAIKLKSNEVLLTI 107
>gi|94969951|ref|YP_591999.1| hypothetical protein Acid345_2924 [Candidatus Koribacter versatilis
Ellin345]
gi|94552001|gb|ABF41925.1| hypothetical protein Acid345_2924 [Candidatus Koribacter versatilis
Ellin345]
Length = 180
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
V+ G ++ +I + ++T ++LS +G+ I V+ + ++ VVD TV
Sbjct: 117 RPAPVVHAGNRLTLIRQGNGVRLTTTVVSLSAGRVGESIHVREYRSSRSINSVVVDAHTV 176
Query: 148 R 148
Sbjct: 177 T 177
>gi|329945240|ref|ZP_08293071.1| putative Flp pilus assembly protein CpaB [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328529283|gb|EGF56204.1| putative Flp pilus assembly protein CpaB [Actinomyces sp. oral
taxon 170 str. F0386]
Length = 261
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 14/126 (11%)
Query: 7 LLFFSLYVLSLDSLFASVIGH-----AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
++ L L +L G +V + ++AG ++ E + ++ S++ +
Sbjct: 1 MVAVCLGTAVLVALSVLRPGPEQGRQVLVAARQVSAGTLITEQDVTTSRLPASSLPQSGL 60
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVL---------HRPYVISRGAKVRIILTQGNMTIST 112
S + VVG L P V+ S+ ++ V L +
Sbjct: 61 ASSEQVVGTRAAITLEPGTVLTSSMTSGHEAEQLGPDERLVQVPVDVGAELAHPGTRVDV 120
Query: 113 AGIALS 118
G A
Sbjct: 121 IGQAPE 126
>gi|154499687|ref|ZP_02037725.1| hypothetical protein BACCAP_03344 [Bacteroides capillosus ATCC
29799]
gi|150271285|gb|EDM98542.1| hypothetical protein BACCAP_03344 [Bacteroides capillosus ATCC
29799]
Length = 296
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 7/131 (5%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
+ + L + + V + + GE + + ++V N+ N AH
Sbjct: 19 SLVLAAVIAFVALPTIARQTNGKTEIVRITQPVLKGETITSDNAEVVEVGGYNLPSNVAH 78
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA-- 120
S+ DV GL L I S + V S + G + IS L+
Sbjct: 79 SMDDVEGLYVTADLAEGDYILTSKVSTVPVSS--DVALNDIPSGKVAISLTVKTLASGLS 136
Query: 121 ---SIGDVIAV 128
GD+I +
Sbjct: 137 DKLQPGDIIRI 147
>gi|257793106|ref|YP_003186504.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479798|gb|ACV60115.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 272
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 40/121 (33%), Gaps = 3/121 (2%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+ +V + + A V + + GEV+ + V S + +
Sbjct: 27 LVTAFVTDRVASHKVPMATAYVAAHDLTVGEVIGPKDVTRTVVPVSTLPPGALT--ASPI 84
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAK-VRIILTQGNMTISTAGIALSDASIGDVIA 127
G + V+ L + + + +T+ST + L+D S+G +
Sbjct: 85 GKTVTAPVYQGQVLVGGDLGHMGGVDGVMRLYGMQTRAYPLTLSTQSVPLTDISVGQAVD 144
Query: 128 V 128
V
Sbjct: 145 V 145
>gi|320532996|ref|ZP_08033744.1| putative Flp pilus assembly protein CpaB [Actinomyces sp. oral
taxon 171 str. F0337]
gi|320134787|gb|EFW26987.1| putative Flp pilus assembly protein CpaB [Actinomyces sp. oral
taxon 171 str. F0337]
Length = 319
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 38/128 (29%), Gaps = 14/128 (10%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGH-----AVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
++ L L +L G +V S I+AG +L + + + ++ +
Sbjct: 57 HLVVAVCLGTAVLVALSVLRPGPERGQQVLVASRAISAGALLTDQDVSTSTLPAGSLPQS 116
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGA---------KVRIILTQGNMTI 110
S VG L V+ S+ GA V L + +
Sbjct: 117 PLTSTGQAVGSRAAISLEKGTVLTASMTSGGMAQELGADERLVQVPVDVGAELARPGARV 176
Query: 111 STAGIALS 118
G A
Sbjct: 177 DVIGQAPE 184
>gi|320161550|ref|YP_004174774.1| hypothetical protein ANT_21480 [Anaerolinea thermophila UNI-1]
gi|320161814|ref|YP_004175039.1| hypothetical protein ANT_24130 [Anaerolinea thermophila UNI-1]
gi|319995403|dbj|BAJ64174.1| hypothetical protein ANT_21480 [Anaerolinea thermophila UNI-1]
gi|319995668|dbj|BAJ64439.1| hypothetical protein ANT_24130 [Anaerolinea thermophila UNI-1]
Length = 290
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 46/152 (30%), Gaps = 13/152 (8%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ +L ++ ++L VV + + G VL E L ++ S
Sbjct: 5 IPLVLAIVVFAVALALNQPEPQVSVVVAAGDLPEGRVLTEGDLTAKELPKSLAPEGAVSD 64
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI- 122
+ +VG R + L G + + + + +S A A +
Sbjct: 65 PQSLVGQRLRVARSAGDPVLPVHLG-------GETLELRPNERAVALSVTA-AQGLAGLL 116
Query: 123 --GDV--IAVKNIDTGVMVSGSVVDTGTVRVV 150
GD + V + + + V +
Sbjct: 117 KPGDRVGVTVIVNASQQTFAKYIAGGLRVLWI 148
>gi|317506822|ref|ZP_07964596.1| SAF domain-containing protein [Segniliparus rugosus ATCC BAA-974]
gi|316254896|gb|EFV14192.1| SAF domain-containing protein [Segniliparus rugosus ATCC BAA-974]
Length = 227
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + + G L + L ++ + A + + +VG + + +
Sbjct: 52 PVVVAAHDLKPGAALLPADLGIRRLPPDQVPEGAATAAEQLVGRTVAGPVRTGETLTDAR 111
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDA-SIGDVIAV 128
+ P + + + + AL+D GDV+ V
Sbjct: 112 VIAPRLA---QLATSVPEARIVPVRLPDQALADMLRPGDVVDV 151
>gi|283780138|ref|YP_003370893.1| hypothetical protein Psta_2363 [Pirellula staleyi DSM 6068]
gi|283438591|gb|ADB17033.1| hypothetical protein Psta_2363 [Pirellula staleyi DSM 6068]
Length = 328
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDT 144
V+ RG VR+ +T++T+ A++D +IG+VI ++ VS VV
Sbjct: 252 RDARGEIVVKRGESVRVRAIAAGVTVTTSAKAMADGAIGEVIELEVDGHRSRVSARVVAP 311
Query: 145 GTVRVVV 151
+ +
Sbjct: 312 QLLEIYA 318
>gi|269836549|ref|YP_003318777.1| Flp pilus assembly protein CpaB [Sphaerobacter thermophilus DSM
20745]
gi|269785812|gb|ACZ37955.1| Flp pilus assembly protein CpaB [Sphaerobacter thermophilus DSM
20745]
Length = 326
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
+ VV + I A VL+E ++ +V + + A + VVG+ L+ I +
Sbjct: 44 ANVVVAARDIPANTVLSEDDIEIAEVDATGVAPGSATAPAQVVGMAVSGNLVKGQQILSA 103
Query: 86 VLHRP 90
L P
Sbjct: 104 NLLAP 108
>gi|170725114|ref|YP_001759140.1| Flp pilus assembly protein CpaB [Shewanella woodyi ATCC 51908]
gi|169810461|gb|ACA85045.1| Flp pilus assembly protein CpaB [Shewanella woodyi ATCC 51908]
Length = 298
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPDHVI 82
+ VV + + G++++E+ + ++ + + H +VG + + P +
Sbjct: 49 MAQVVVATQELRKGDIISEANMSVRKIQADTLPLDAIHPKDFNQIVGQMLLEPMSPGRPL 108
Query: 83 PLSVLHRP 90
+ L
Sbjct: 109 MGTYLPGH 116
>gi|253576735|ref|ZP_04854062.1| SAF domain-containing protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843945|gb|EES71966.1| SAF domain-containing protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 318
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 29/72 (40%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
VP+ I AG + S LK +++ +++ + S + + G + L +
Sbjct: 61 QRTVQGWVPTRDIPAGNRIAASDLKRVELPANSVPADLFKSQEAIAGKYAKIALRSMTPL 120
Query: 83 PLSVLHRPYVIS 94
++++ +
Sbjct: 121 TEALVYEEAPVP 132
>gi|297626968|ref|YP_003688731.1| hypothetical protein PFREUD_18030 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296922733|emb|CBL57311.1| Hypothetical protein PFREUD_18030 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 211
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 39/117 (33%), Gaps = 5/117 (4%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
+ VL+ AS V+ S + AG + + +QV +G V
Sbjct: 31 VAVLTALDPSASSSHTVVIASRPLAAGVAVGADDVTTLQVPAEVATSATLADPGAAIGQV 90
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
V+ S +++ + ++ I G+A +G+ I+V
Sbjct: 91 VAVPRPAGTVLTSSDFVGKGLVADSDGLTLV----PFRIEDKGVAGVLG-VGNQISV 142
>gi|260904284|ref|ZP_05912606.1| SAF domain-containing protein [Brevibacterium linens BL2]
Length = 209
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 22/75 (29%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + + G L L ++ + S+ D T L + S
Sbjct: 50 PIVVANRNLPPGSQLRTQDLTLVEFPARLVPDKAFTSVSDADHKRTSAGLSKGSPLTQSA 109
Query: 87 LHRPYVISRGAKVRI 101
+ + G+ +
Sbjct: 110 VLDQQALPDGSTDLL 124
>gi|237752267|ref|ZP_04582747.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
winghamensis ATCC BAA-430]
gi|229376509|gb|EEO26600.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
winghamensis ATCC BAA-430]
Length = 303
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 65 KDVVGLVTRRVLLPDHVIPLSV-LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
+ +G V R P VI L V+ +G ++ I + + + + A DA++G
Sbjct: 217 EGEMGRVAVRSYTPKDVIITRDRLISKRVVKKGDRILISVVENGVLLEFTLEAQKDAAVG 276
Query: 124 DVIAVKNIDTGVMVSGSVVDTGT 146
DVI + I+ +++ G
Sbjct: 277 DVIKARVINGKKTYEVEIIEEGK 299
>gi|209886527|ref|YP_002290384.1| Flp pilus assembly protein CpaB [Oligotropha carboxidovorans OM5]
gi|209874723|gb|ACI94519.1| Flp pilus assembly protein CpaB [Oligotropha carboxidovorans OM5]
Length = 272
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 43/148 (29%), Gaps = 23/148 (15%)
Query: 6 FLLFFSLYVLSLDSLFAS--VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
FL S + + A +V I G+ + + + ++
Sbjct: 21 FLASGSDQKPAEVAAPAPKLETTDVLVAKADIPLGQTIKAEDMTWQTWPAATASSSFIRK 80
Query: 64 IK------DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
+ D+ G + R L I + L + G+ + M + I+
Sbjct: 81 SERASAVADLTGSIARSPFLAGEPIRETKLVKS----NGSGFMAAILPSGMRAVSTEISP 136
Query: 118 SDASIG-----DVIAV------KNIDTG 134
+ G D + V +N D+
Sbjct: 137 ETGAGGFILPNDRVDVMLSRRQRNPDSN 164
>gi|296134297|ref|YP_003641544.1| Flp pilus assembly protein CpaB [Thermincola sp. JR]
gi|296032875|gb|ADG83643.1| Flp pilus assembly protein CpaB [Thermincola potens JR]
Length = 257
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
VV +V I A V+ + V + N + V+G V+ + +
Sbjct: 37 TKKVVVANVNIPARTVITGDMVSVKDVPEEFVHPNAVLDEEQVIGFVSGSDISAGEQVLR 96
Query: 85 SVLHRPYVISRGAKVRIILTQG 106
+ + G V +
Sbjct: 97 EKI----LRKEGNPVSLSYQVP 114
>gi|269926136|ref|YP_003322759.1| Flp pilus assembly protein CpaB [Thermobaculum terrenum ATCC
BAA-798]
gi|269789796|gb|ACZ41937.1| Flp pilus assembly protein CpaB [Thermobaculum terrenum ATCC
BAA-798]
Length = 258
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 28/89 (31%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
L ++ + ++ VV + I G + S L+ SI D
Sbjct: 22 LTVINVTRAAREAKPVIKQVQVVVAAQDIAQGSPITASMLETKPFPADFAPSEAVSSIND 81
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISR 95
V + ++ +I +L + +
Sbjct: 82 AVNRYSATNIVKGQIITRPLLSDTKQVGK 110
>gi|258510582|ref|YP_003184016.1| SAF domain-containing protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257477308|gb|ACV57627.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 264
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 41/121 (33%), Gaps = 3/121 (2%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+ +V+ + + A V S + GE + + V S + +
Sbjct: 27 LVTAFVMDRVATHKVPMATAYVASHDLTVGETIGAKDVTRTVVPVSTLPPGALT--ASPI 84
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAK-VRIILTQGNMTISTAGIALSDASIGDVIA 127
G + V+ L ++ + + +T+ST + ++D S+G +
Sbjct: 85 GKTVTAPVYQGQVLVGGDLGHMGGVNGVMRLYGMQTRAYPLTLSTQSVPMTDISVGQAVD 144
Query: 128 V 128
V
Sbjct: 145 V 145
>gi|300856049|ref|YP_003781033.1| putative cell wall-binding protein [Clostridium ljungdahlii DSM
13528]
gi|300436164|gb|ADK15931.1| putative cell wall binding protein [Clostridium ljungdahlii DSM
13528]
Length = 321
Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 51/138 (36%), Gaps = 14/138 (10%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
A+ +V + I+ G ++++ +K++QV + I NY + G T + +
Sbjct: 36 AAKKTTILVAAETISPGTLIDKKMIKKIQVPYNPIFDNYIKDSSKIAGKYTTETISKNEG 95
Query: 82 IPLSVLHRPYVISRGAKVRIILTQG--NMTISTAGIALSDASIG-----DVIAVKNIDTG 134
+ L G ++ + + ++IS G G D + + +
Sbjct: 96 FHIDKLLEK----GGDELNLKIDNDYRAISISVTG---DSGVSGLLKPKDYVDIIVYTSE 148
Query: 135 VMVSGSVVDTGTVRVVVK 152
VV ++V++
Sbjct: 149 KRDGIKVVRPDEAKIVLQ 166
>gi|169834850|ref|YP_001715940.1| SAF domain-containing protein [Clostridium botulinum A3 str. Loch
Maree]
gi|169408957|gb|ACA57367.1| SAF domain family [Clostridium botulinum A3 str. Loch Maree]
Length = 208
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Query: 4 VRFLLFFSLYVLSLDSLF---ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
++F + L++ ++ + S V IN G+++ E ++ +++N N+ +
Sbjct: 5 LKFGIVGILFLFTVFYIILKNVSGTTKVAVLKNDINKGKIITEQDVETKEISNKNVLPDI 64
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
S KD+VG + L + IP I +++ + +TI DA
Sbjct: 65 VLSPKDIVGKSLKVDRLQNDFIPKK-------IIGDTSIKLKSNEMLLTIFMP---REDA 114
Query: 121 SI---GDVIAVKNIDTG-----VMVSGSVV 142
+ GD IA+ I+ ++ G ++
Sbjct: 115 KLISTGDEIALALIENNANENPQIIKGLII 144
>gi|317154606|ref|YP_004122654.1| Flp pilus assembly protein CpaB [Desulfovibrio aespoeensis Aspo-2]
gi|316944857|gb|ADU63908.1| Flp pilus assembly protein CpaB [Desulfovibrio aespoeensis Aspo-2]
Length = 273
Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 2/113 (1%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + VV + G L + L+ Q T + + G V +
Sbjct: 37 VAAPRAETVPVVVALTDLRPGIKLTPAMLETRQFTPDSRPSGAFGEPGLLDGRVLGVAVG 96
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
+ + + L VI G I + M++ + + GD + V
Sbjct: 97 ANEAVTEAKLADASVIGGGVSALIEPGKRAMSVKGNAVMGLAGFVRPGDRVDV 149
>gi|258651609|ref|YP_003200765.1| SAF domain-containing protein [Nakamurella multipartita DSM 44233]
gi|258554834|gb|ACV77776.1| SAF domain protein [Nakamurella multipartita DSM 44233]
Length = 214
Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI- 64
L+ ++ + + S S ++AG V+ L ++V + G Y
Sbjct: 27 LLVIAAIVLGARVMAAGSQTTPVWAASRSLSAGTVIGAGDLTAVEVNLGDQAGAYLTPAG 86
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHR 89
VG L ++ S +
Sbjct: 87 DSPVGRTLVAPLGAGELLAGSAVEP 111
>gi|284048527|ref|YP_003398866.1| Flp pilus assembly protein CpaB [Acidaminococcus fermentans DSM
20731]
gi|283952748|gb|ADB47551.1| Flp pilus assembly protein CpaB [Acidaminococcus fermentans DSM
20731]
Length = 339
Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 21/64 (32%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
V + I VL E LK ++V + + K +G T L ++
Sbjct: 69 TVVEAARDIAPQTVLTEEMLKTVEVPANLVPAGALTDKKQALGKKTGIDLFAGDILTERK 128
Query: 87 LHRP 90
L
Sbjct: 129 LTSH 132
>gi|257792958|ref|YP_003186357.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479650|gb|ACV59968.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 235
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 24/64 (37%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
V + A + S ++ ++V S + + + + ++G T + + + V+
Sbjct: 37 VYVARTQLPADTPIQASDVERIRVPKSEVSPDAITNAEGLMGTYTAQPVDQNQVLTALDT 96
Query: 88 HRPY 91
Sbjct: 97 EPDP 100
>gi|148253053|ref|YP_001237638.1| hypothetical protein BBta_1513 [Bradyrhizobium sp. BTAi1]
gi|146405226|gb|ABQ33732.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 309
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 15/138 (10%)
Query: 8 LFFSLYVLSLDSLFASVIGH----AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH- 62
+ + + S +V + I G +L + + V +R Y
Sbjct: 23 IAWFSQMRSRPVAVVERSVESRPAVLVAARTIALGTLLRKEDIAWKDVMPGEVRPGYLMR 82
Query: 63 ---SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
S + +G ++RR D + S +P + +L G+ IS A
Sbjct: 83 GQVSEAEFLGAISRRNFAQDEPLIASEFVKP---GDRQFLAAVLKPGSRAISIFVDAAQS 139
Query: 120 AS----IGDVIAVKNIDT 133
A+ GD + V +
Sbjct: 140 AAGMALPGDRVDVILTQS 157
>gi|323702114|ref|ZP_08113782.1| Flp pilus assembly protein CpaB [Desulfotomaculum nigrificans DSM
574]
gi|323532996|gb|EGB22867.1| Flp pilus assembly protein CpaB [Desulfotomaculum nigrificans DSM
574]
Length = 234
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VVP I +L +K + I+ A KDVVG VTR L P+ I LS
Sbjct: 40 QVVVPKQTIGPNTMLTAQMVKVKDIPVEMIQPGTAMDTKDVVGKVTRSDLYPEEPILLSR 99
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
LH+ + + I Q +T+ ++ + GD + +
Sbjct: 100 LHQDKDSTGELALAIPTGQRALTVEVDAVSGVAGMLKPGDHVDI 143
>gi|226325180|ref|ZP_03800698.1| hypothetical protein COPCOM_02972 [Coprococcus comes ATCC 27758]
gi|225206528|gb|EEG88882.1| hypothetical protein COPCOM_02972 [Coprococcus comes ATCC 27758]
Length = 497
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 37/125 (29%), Gaps = 7/125 (5%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ S V + I+AG+ ++ S L + V NS + T
Sbjct: 304 RIAEAFSGTTEVVAATKTIHAGDEISASDLAFVSVPNSTVADGAITKKDIDDSSKTPVGR 363
Query: 77 LPDHVI-PLSVLHRPYVISRGAKVRIILTQG----NMTISTAGIALSDA--SIGDVIAVK 129
+ I S L + + G +TIS + + D + V
Sbjct: 364 VATQYIAKGSQLTNASTAGKDNPESLAAAIGDGMEAVTISVDAQSGMGGMLRVNDRVKVI 423
Query: 130 NIDTG 134
+ G
Sbjct: 424 QPNDG 428
>gi|156744073|ref|YP_001434202.1| SAF domain-containing protein [Roseiflexus castenholzii DSM 13941]
gi|156235401|gb|ABU60184.1| SAF domain protein [Roseiflexus castenholzii DSM 13941]
Length = 267
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 5/59 (8%), Positives = 15/59 (25%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
V + + G + + + + N + + R + S+
Sbjct: 64 PVAARPLAPGNTIGPDDILLKDYPVNLVPVNALTDTTQIENRILARTVGQGDPFQKSMF 122
>gi|323341956|ref|ZP_08082189.1| flp pilus assembly CpaB [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322464381|gb|EFY09574.1| flp pilus assembly CpaB [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 269
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 30/106 (28%), Gaps = 4/106 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + A + + ++ V + VVG VT + +
Sbjct: 36 LTQVVVALKPLTAQTRITQDMIEVKNVHKDAAPEGAFADAERVVGKVTTTKMSVGDMFTG 95
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKN 130
+ S G + T+ G G +I V N
Sbjct: 96 EKVEVVGQGSSGLSTVLTDNMRAYTVKLEG---QYGMQG-LIRVGN 137
>gi|134097376|ref|YP_001103037.1| hypothetical protein SACE_0770 [Saccharopolyspora erythraea NRRL
2338]
gi|291009066|ref|ZP_06567039.1| hypothetical protein SeryN2_31485 [Saccharopolyspora erythraea
NRRL 2338]
gi|133909999|emb|CAM00111.1| hypothetical protein SACE_0770 [Saccharopolyspora erythraea NRRL
2338]
Length = 183
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 17/62 (27%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
AS +V + + G VL + + G + + G V
Sbjct: 18 ASDGVPVLVAARDLAPGHVLEPDDVARRTMPAELAPGGVLSEVDEATGRVLGTASRSGEP 77
Query: 82 IP 83
+
Sbjct: 78 LT 79
>gi|317133361|ref|YP_004092675.1| hypothetical protein Ethha_2449 [Ethanoligenens harbinense YUAN-3]
gi|315471340|gb|ADU27944.1| hypothetical protein Ethha_2449 [Ethanoligenens harbinense YUAN-3]
Length = 287
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 12/117 (10%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L + V +I G + + ++ QV+ N++ N + VVG +
Sbjct: 59 LVNRLTMATVPVVRAKEIIPQGTQITPNMIEVDQVSKYNLQSNVTGNTSLVVGAYATTEI 118
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA-----SIGDVIAV 128
+P I L + + L G M +S LSDA GD++ V
Sbjct: 119 MPQDNITGDKLSKSNPVY-------TLDTGEMLVSVPVKNLSDALAGQLKAGDIVRV 168
>gi|213966094|ref|ZP_03394282.1| SAF domain protein [Corynebacterium amycolatum SK46]
gi|213951292|gb|EEB62686.1| SAF domain protein [Corynebacterium amycolatum SK46]
Length = 205
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 45/133 (33%), Gaps = 9/133 (6%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGH------AVVPSVVINAGEVLNESRLKEMQVTNSNI 56
+R ++ ++++ ++ + V+ + I AG + E + + +
Sbjct: 20 TIRRIVALTVFLCAVGLAAVESLTPRSGHTRVVISAKSIAAGASVAEQDVAFKDIPRDLV 79
Query: 57 RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI- 115
G I V G + P I +++ +T++ +GI
Sbjct: 80 PGGAVTDIAAVRGRTLATGMSPGE-IFTEQRMVGPSLAKSLTGTSESKIIAITLTDSGIV 138
Query: 116 -ALSDASIGDVIA 127
AL D+++
Sbjct: 139 SALHTGDSVDIVS 151
>gi|317122047|ref|YP_004102050.1| Flp pilus assembly protein CpaB [Thermaerobacter marianensis DSM
12885]
gi|315592027|gb|ADU51323.1| Flp pilus assembly protein CpaB [Thermaerobacter marianensis DSM
12885]
Length = 236
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 44/134 (32%), Gaps = 12/134 (8%)
Query: 6 FLLFFSLYVLSLDSLFASVIG---------HAVVPSVVINAGEVLNESRLKEMQVTNSNI 56
+ L V L + + V VV + + A L L QV +
Sbjct: 12 LPVLVGLAVTVLVAFYIRVPAGQAESGPRVPVVVATRPVPAQTRLEADMLAVRQVPADLV 71
Query: 57 RGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA 116
++D VG VT+ L + S L R + G R+ +T++ +
Sbjct: 72 GRGAIGRLEDAVGKVTKVPLAEGEFVLASKLARG-DGTDGLAYRLPEGTRALTVAADPVI 130
Query: 117 LSDASI--GDVIAV 128
+ GD + V
Sbjct: 131 AVGGFVQPGDRVDV 144
>gi|330719627|gb|EGG98195.1| Flagellar basal-body P-ring formation protein flgA [gamma
proteobacterium IMCC2047]
Length = 205
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ +YV + V + + + L+ S + + S + Y S+ +V+G
Sbjct: 101 WQIYVPVSVKAY----QKVVTAAAPLTREQRLDASVIALTEKEVSRLTQGYYSSVNEVLG 156
Query: 70 LVTRRVLLPDHVIPLSVLHRPYV 92
+R + + VI +++ V
Sbjct: 157 KSLKRPVPLNGVIQPNMVVEAIV 179
>gi|261406226|ref|YP_003242467.1| SAF domain-containing protein [Paenibacillus sp. Y412MC10]
gi|261282689|gb|ACX64660.1| SAF domain protein [Paenibacillus sp. Y412MC10]
Length = 367
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 26/66 (39%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ A VP I G + +KE+++ GN +++ G + LL I
Sbjct: 66 MQAAWVPVRDIPPGHFIEAKDIKEVRLPYDGTSGNLFSGREEIAGKGAKIELLQGMPITG 125
Query: 85 SVLHRP 90
++L
Sbjct: 126 AMLFEE 131
>gi|313902408|ref|ZP_07835811.1| Flp pilus assembly protein CpaB [Thermaerobacter subterraneus DSM
13965]
gi|313467339|gb|EFR62850.1| Flp pilus assembly protein CpaB [Thermaerobacter subterraneus DSM
13965]
Length = 302
Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 4/114 (3%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L L A+ VV + + A + + + + + + V+G V RR +
Sbjct: 24 LIYLDATASLPVVVATRPLRAPLNVEADMVSVVPLPAAAVHPRAVGDPSRVIGHVLRRDV 83
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
+ + + G + Q I T ++ GD + V
Sbjct: 84 EAGEPLLEADVVAGE--GAGLSAFLEEHQQAFFIPTRLEQGLGGAVEPGDRVDV 135
>gi|332798621|ref|YP_004460120.1| Flp pilus assembly protein CpaB [Tepidanaerobacter sp. Re1]
gi|332696356|gb|AEE90813.1| Flp pilus assembly protein CpaB [Tepidanaerobacter sp. Re1]
Length = 264
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 38/115 (33%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ C+ L S S V + I + + +T S+ NY
Sbjct: 16 VTCISLYLIVSNLQKGGSIALNSKTITVVTATQNIAPYTKITAEMVSAQNITASDGIQNY 75
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115
I DVVG + + + VI + + IS G ++ +TI+
Sbjct: 76 FTQIGDVVGKICKSDIYAGEVITSNRIAGEKDISLGLATQLENGMRAVTIAVDVE 130
>gi|297572143|ref|YP_003697917.1| SAF domain protein [Arcanobacterium haemolyticum DSM 20595]
gi|296932490|gb|ADH93298.1| SAF domain protein [Arcanobacterium haemolyticum DSM 20595]
Length = 203
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 10/119 (8%)
Query: 4 VRFLLFFSLYVLSLDSLF---ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ F +++ SL S A AVV + + AG L++S L + + + + G+
Sbjct: 7 IGFAALVAVFAQSLVSALDSSAPARYRAVVAATDLPAGHQLSDSDLSVLPLP-TQLPGST 65
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRII-----LTQGNMTISTAG 114
++ DV G + +I + P + + + +I G +++ G
Sbjct: 66 V-NVTDVSGHHLLVSVPKGALISTHHVLSPQTLEQASPGYVIAPVLLADTGGLSLIHTG 123
>gi|229587471|ref|YP_002860509.1| hypothetical protein CLJ_0202 [Clostridium botulinum Ba4 str. 657]
gi|229260129|gb|ACQ51166.1| hypothetical protein CLJ_0202 [Clostridium botulinum Ba4 str. 657]
Length = 242
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 6 FLLFFSLYVLS-----LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ + YV L +L S ++ VIN GE++NE ++E + +NI N
Sbjct: 26 MAIAGAYYVSEYANINLPTLNKSSKAPVIIAKRVINEGELINEGDIEEKIMPINNIAKNT 85
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVL 87
+ KD++G +T L P+ I +
Sbjct: 86 INVKKDLIGKITVNKLEPNEQIKKYDV 112
>gi|117928960|ref|YP_873511.1| hypothetical protein Acel_1753 [Acidothermus cellulolyticus 11B]
gi|117649423|gb|ABK53525.1| conserved hypothetical protein [Acidothermus cellulolyticus 11B]
Length = 236
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 4/97 (4%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
L+ S+ + A + + G L+ S L ++V + Y
Sbjct: 38 LLIVVSIAAGAKILDSARHYDTVWAAARDLAPGTTLSHSDLTPVKVRFRDHGARYVAGGS 97
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRII 102
D+ G R + +IP S + G VR++
Sbjct: 98 DLAGWTVTRPVPAGELIPRSAVSERA----GTPVRLV 130
>gi|260204206|ref|ZP_05771697.1| hypothetical protein MtubK8_07852 [Mycobacterium tuberculosis K85]
gi|289573628|ref|ZP_06453855.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289538059|gb|EFD42637.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length = 218
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 28/86 (32%), Gaps = 3/86 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFA---SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57
+ RF + + + +L + VV + + G VL ++ + + + +
Sbjct: 26 VRARRFAAAGLVMLAGVAALRSNPEDDRAEVVVAAHDLRPGTVLTPGDVRLEKRSATTLP 85
Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIP 83
+ VVG V+
Sbjct: 86 DGSQADLDAVVGSTLASPTRRGEVLT 111
>gi|127511580|ref|YP_001092777.1| SAF domain-containing protein [Shewanella loihica PV-4]
gi|126636875|gb|ABO22518.1| SAF domain protein [Shewanella loihica PV-4]
Length = 298
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 6/61 (9%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLVTRRVLLPDHV 81
+ +V + + G++++++ + Q+ + + +V G + + + P
Sbjct: 48 AMADVIVATQPLKKGDIISQANMSVRQIRADTLPLDAIHPSRFGEVAGQMLLQPMAPGRP 107
Query: 82 I 82
+
Sbjct: 108 L 108
>gi|187923644|ref|YP_001895286.1| Flp pilus assembly protein CpaB [Burkholderia phytofirmans PsJN]
gi|187714838|gb|ACD16062.1| Flp pilus assembly protein CpaB [Burkholderia phytofirmans PsJN]
Length = 316
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 27/87 (31%), Gaps = 5/87 (5%)
Query: 4 VRFLLFFSL---YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
V L +SL L + VV + + AG+ + ++ + +
Sbjct: 18 VLGLFAWSLSRRPALVAVTPATQASFRVVVATHTLPAGKAITVDDVRVQSLPIN--PNGA 75
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVL 87
+ G V + + + S L
Sbjct: 76 FTDPAQLAGRVPNAEIGAESPVLESQL 102
>gi|119961714|ref|YP_948564.1| Flp pilus assembly protein [Arthrobacter aurescens TC1]
gi|119948573|gb|ABM07484.1| putative Flp pilus assembly protein CpaB family [Arthrobacter
aurescens TC1]
Length = 269
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Query: 5 RFLLFFSLYVLSLDSLF-----ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
R + L V + ++ + VV + + G L ES L + V
Sbjct: 70 RLAVALLLCVAAGIAVHQLTPASEQRVSVVVAARDLPTGTSLTESDLTSVGVPPDLALSG 129
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
+SI +VG L + S L
Sbjct: 130 ALNSIGTLVGRQLASPLGKGQIPTESSL 157
>gi|169834865|ref|YP_001715910.1| hypothetical protein CLK_A0283 [Clostridium botulinum A3 str. Loch
Maree]
gi|169408972|gb|ACA57382.1| hypothetical protein CLK_A0283 [Clostridium botulinum A3 str. Loch
Maree]
Length = 242
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 6 FLLFFSLYVLS-----LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ + YV L +L S ++ VI+ GE++NE ++E + +NI N
Sbjct: 26 MAIAGAYYVSEYANINLPTLNKSSKAPVIIAKRVISEGELINEGDIEEKIMPINNIAKNT 85
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVL 87
+ KD++G +T L P+ I +
Sbjct: 86 INVKKDLIGKITVNKLEPNEQIKKYDV 112
>gi|330719628|gb|EGG98196.1| hypothetical protein imdm_386 [gamma proteobacterium IMCC2047]
Length = 44
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 108 MTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTVRVVV 151
M++ + GIA+++ +G I VKN + +++ VV++ V VV+
Sbjct: 1 MSVKSPGIAINNGRVGQQIQVKNKSSKRVITARVVNSRLVEVVM 44
>gi|261856885|ref|YP_003264168.1| Flp pilus assembly protein CpaB [Halothiobacillus neapolitanus c2]
gi|261837354|gb|ACX97121.1| Flp pilus assembly protein CpaB [Halothiobacillus neapolitanus c2]
Length = 258
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVL 76
+ + VVP + G+VL+ L + + + + + +G + L
Sbjct: 39 TAAPQKMRTVVVPVHNLKVGDVLSAKDLATRDIPVAYVPADALTPDDYESHLGQMLTTPL 98
Query: 77 LPDHVIPLSVLHR 89
I +
Sbjct: 99 AQGAPISAMAMEP 111
>gi|117927367|ref|YP_871918.1| hypothetical protein Acel_0157 [Acidothermus cellulolyticus 11B]
gi|117647830|gb|ABK51932.1| hypothetical protein Acel_0157 [Acidothermus cellulolyticus 11B]
Length = 238
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 27/93 (29%), Gaps = 1/93 (1%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ VV + AG + ++ ++ + H + +V G +
Sbjct: 57 LTPRPPATVDVVVAQRDLPAGATIRDADVRLAAFPTNLQPAGTLHRLVEVTGRRLISPVR 116
Query: 78 PDHVIPLSVLHRPYVISRG-AKVRIILTQGNMT 109
+ + G V I + G +T
Sbjct: 117 RGEPLTDVRFGGGAHPAPGLVAVPIHVADGAVT 149
>gi|332187912|ref|ZP_08389645.1| hypothetical protein SUS17_3030 [Sphingomonas sp. S17]
gi|332012073|gb|EGI54145.1| hypothetical protein SUS17_3030 [Sphingomonas sp. S17]
Length = 165
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 25/60 (41%)
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ VI RG V I +I+ G+A++DA+ G V+ + + +G
Sbjct: 98 VKAEPVIRRGDPVVIEAGSDGFSITREGVAMADAAPGGHFPVRIDAARQPIQAVALASGR 157
>gi|329930829|ref|ZP_08284228.1| SAF domain protein [Paenibacillus sp. HGF5]
gi|328934531|gb|EGG31036.1| SAF domain protein [Paenibacillus sp. HGF5]
Length = 367
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 26/66 (39%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ A VP I G + +KE+++ GN +++ G + LL I
Sbjct: 66 MQVAWVPVRDIPPGHFIEAKDIKEVRLPYDGTSGNLFSGREEIAGKGAKIELLRGMPITG 125
Query: 85 SVLHRP 90
++L
Sbjct: 126 AMLFEE 131
>gi|218290612|ref|ZP_03494714.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239396|gb|EED06593.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 267
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 45/121 (37%), Gaps = 3/121 (2%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+ +V+ + + A V + + GEV+ + +V + + V
Sbjct: 28 LVTAFVIERVATHKVPMAMAFVAAHDLTVGEVIGPKDVTRTKVPVATLPPGAMTV--SPV 85
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRII-LTQGNMTISTAGIALSDASIGDVIA 127
G + + V+ L R ++ ++ +T+ST + ++D S+G +
Sbjct: 86 GKMVTSPVYQGQVLVGGDLGRMGGVNGVMRLYGTQTRAYPLTLSTQSVPMNDVSVGQAVD 145
Query: 128 V 128
V
Sbjct: 146 V 146
>gi|325676315|ref|ZP_08155994.1| hypothetical protein HMPREF0724_13777 [Rhodococcus equi ATCC 33707]
gi|325552876|gb|EGD22559.1| hypothetical protein HMPREF0724_13777 [Rhodococcus equi ATCC 33707]
Length = 234
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 34/118 (28%), Gaps = 10/118 (8%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVI----GHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57
D R + L V + L + +V + + G VL ++ + + ++
Sbjct: 37 DTARRVTAGVLIVAAGVLLLRDGLRDSGAPVLVAAHDLTPGTVLTPDDVRVVARPDPDLP 96
Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIP------LSVLHRPYVISRGAKVRIILTQGNMT 109
+ D G + ++ + V + LT ++
Sbjct: 97 EGSVRVVADASGRTVASPVRAGEMLTDVRLLGPRLTEAAAGAPDARMVPVRLTDPGLS 154
>gi|315646608|ref|ZP_07899726.1| SAF domain protein [Paenibacillus vortex V453]
gi|315278251|gb|EFU41571.1| SAF domain protein [Paenibacillus vortex V453]
Length = 365
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 25/66 (37%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ A VP I G + +KE+++ N +++ G + LL I
Sbjct: 66 MQVAWVPVRDIPPGHFIEAKDIKEVRLPYEGASNNLLSVKEEIAGKGVKIELLQGTPITR 125
Query: 85 SVLHRP 90
++L
Sbjct: 126 TMLFEE 131
>gi|78486069|ref|YP_391994.1| Flp pilus assembly CpaB [Thiomicrospira crunogena XCL-2]
gi|78364355|gb|ABB42320.1| Flp (type IV) pilus assembly protein CpaB homolog [Thiomicrospira
crunogena XCL-2]
Length = 296
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 12/130 (9%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNI-RGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV S I GE + +K + V + + ++ VG V + + I
Sbjct: 56 IVVASRDIYRGEKIEADDVKVLNVPMEGLVVKGVIINPQNAVGHVAHQKIYAGEWILAKK 115
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG--------DVIAV-KNIDTGVMV 137
L SR V +L + I +G DVI+V ++ D+ MV
Sbjct: 116 LKLESQ-SRFQSVEALLEKTRRAIRLPIEP-DTGLLGIISPGDHVDVISVFESADSKRMV 173
Query: 138 SGSVVDTGTV 147
S +++ TV
Sbjct: 174 SRTILQNITV 183
>gi|157283957|ref|YP_001468225.1| SAF domain-containing protein [Kineococcus radiotolerans SRS30216]
gi|151363099|gb|ABS06101.1| SAF domain protein [Kineococcus radiotolerans SRS30216]
Length = 252
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 37/123 (30%), Gaps = 7/123 (5%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
++ S ++ A + + + AG+ + L+ +V S
Sbjct: 69 LIIVGSATAGAVLYSSAGDRHDVLALARDVPAGQKITAEDLRVAEVNGSGFSAVIKEHAD 128
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
VVG L ++ + + G + + G SDA G
Sbjct: 129 QVVGSTAISSLPEGALLTNKMYQDDPIPEPGNVIVGASLKP-------GSVPSDAQPGRR 181
Query: 126 IAV 128
+AV
Sbjct: 182 VAV 184
>gi|226307879|ref|YP_002767839.1| hypothetical protein RER_43920 [Rhodococcus erythropolis PR4]
gi|226186996|dbj|BAH35100.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 248
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 23/62 (37%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
A+ VV S + G+V+ +S ++ ++ + + VVG +
Sbjct: 65 ATDTVAVVVSSRDLTPGQVIADSDVEIREIDSKQLPEGVVSDTDLVVGRTVAGPIRSGET 124
Query: 82 IP 83
+
Sbjct: 125 VT 126
>gi|304405122|ref|ZP_07386782.1| SAF domain protein [Paenibacillus curdlanolyticus YK9]
gi|304346001|gb|EFM11835.1| SAF domain protein [Paenibacillus curdlanolyticus YK9]
Length = 240
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 9/104 (8%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VVP I AGE L + L + S ++ + + + G L + +
Sbjct: 37 MVRIVVPKRFIAAGERLEAADLTYRSIAKSAVQQDMVLELVEADGWEAVVPLGAEEPLLK 96
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTI-STAGIALSDA-SIGDVI 126
L R ++ +Q I + +++S+ GD++
Sbjct: 97 WKLDRYRLLPD-------QSQSTFQIPRSYVLSVSNGIRAGDLV 133
>gi|154250525|ref|YP_001411349.1| SAF domain-containing protein [Parvibaculum lavamentivorans DS-1]
gi|154154475|gb|ABS61692.1| SAF domain protein [Parvibaculum lavamentivorans DS-1]
Length = 317
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 4/111 (3%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
L A +V + + G+ ++E+ L ++ + +G V +
Sbjct: 69 LAAENAVTVLVAARDVVRGQRISEADLGLRRME-GPAPSGSFADAQSAIGRVATDDIRSS 127
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAV 128
+I L + G + Q I A + GD + V
Sbjct: 128 QIIFQQALSSEPAAA-GIAALVPEGQRAFAIRIAEEDIVGGFLQAGDRVDV 177
>gi|313902402|ref|ZP_07835805.1| Flp pilus assembly protein CpaB [Thermaerobacter subterraneus DSM
13965]
gi|313467333|gb|EFR62844.1| Flp pilus assembly protein CpaB [Thermaerobacter subterraneus DSM
13965]
Length = 236
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 12/139 (8%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIG---------HAVVPSVVINAGEVLNESRLKEMQV 51
+ + + L V L + + V VV + + A L L QV
Sbjct: 7 VRYLLLPVLAGLAVTILVAFYVRVPAGEAGKEPRVPVVVATRPVPAQTPLQADMLAVRQV 66
Query: 52 TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111
+ I++ VG VT+ L + S L R S G R+ +TI+
Sbjct: 67 PADVVGRGAVGRIEEAVGKVTKVPLAEGEFVLTSKLARG-DGSDGLAYRLPEGTRALTIA 125
Query: 112 TAGIALSDA--SIGDVIAV 128
+ GD + V
Sbjct: 126 ADPVLAVGGFVQPGDRVDV 144
>gi|218289538|ref|ZP_03493766.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218240406|gb|EED07588.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 235
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 7/64 (10%), Positives = 24/64 (37%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
V + A + + ++ ++V S + + + + ++G T + + + V+
Sbjct: 37 VYVARTQMPADTPIQATDVERIRVPKSEVSPDAITNAEGLIGAYTAQPVDQNQVLTALDT 96
Query: 88 HRPY 91
Sbjct: 97 EPDP 100
>gi|227487790|ref|ZP_03918106.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227542431|ref|ZP_03972480.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092292|gb|EEI27604.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227181629|gb|EEI62601.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 192
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+R + SL +L+ V S ++AGE L S V S I N
Sbjct: 15 LRRIAAVSLVILAATLSLTRKDPTVVTLSRTVSAGETLAPSDFSRTSVPQSLIPDNAVTD 74
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96
G V L ++ + + G
Sbjct: 75 DTAAHGNVAVTTLSRGQILTSTSYTGEGITPAG 107
>gi|331694666|ref|YP_004330905.1| SAF domain-containing protein [Pseudonocardia dioxanivorans CB1190]
gi|326949355|gb|AEA23052.1| SAF domain protein [Pseudonocardia dioxanivorans CB1190]
Length = 224
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 8/109 (7%)
Query: 5 RFLLFFSLYVLSLDSLF---ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
R ++ +L V ++ A VV + AG L + + + G A
Sbjct: 31 RRVIAGALVVTAVVLALRPAADPGVPVVVAVHDLPAGTTLAAADVAVRSWPQGLVPGGVA 90
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI 110
+ DV G V + ++ V +++
Sbjct: 91 AAPSDVTGRVLAGPARAGEPLT-----DLRLVGPALAVVATGRADAVSV 134
>gi|163846486|ref|YP_001634530.1| SAF domain-containing protein [Chloroflexus aurantiacus J-10-fl]
gi|222524269|ref|YP_002568740.1| SAF domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163667775|gb|ABY34141.1| SAF domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222448148|gb|ACM52414.1| SAF domain protein [Chloroflexus sp. Y-400-fl]
Length = 269
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 1/84 (1%)
Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKD 66
L + + L AS V+ + + G+ ++ L + + ++ S
Sbjct: 28 LLITAVFTVIAFLEASRSEPVVILARDVPYGQQISADDLAVVLLPRHRPVQLTGISSPAL 87
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRP 90
VG R L + ++ S+L
Sbjct: 88 AVGQYAARHLAANDLLQPSMLMEH 111
>gi|148657460|ref|YP_001277665.1| SAF domain-containing protein [Roseiflexus sp. RS-1]
gi|148569570|gb|ABQ91715.1| SAF domain [Roseiflexus sp. RS-1]
Length = 260
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 18/76 (23%), Gaps = 4/76 (5%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
V + + G + + + N + V R +
Sbjct: 53 TIKLPVAARSLTPGNAIGPDDILLKDFPVDLVPVNALTETTQIESRVLARAVGQGDPFQR 112
Query: 85 SVLHRPYVISRGAKVR 100
S+ V RG V
Sbjct: 113 SMF----VGERGESVS 124
>gi|260431083|ref|ZP_05785054.1| Flp pilus assembly protein CpaB [Silicibacter lacuscaerulensis
ITI-1157]
gi|260414911|gb|EEX08170.1| Flp pilus assembly protein CpaB [Silicibacter lacuscaerulensis
ITI-1157]
Length = 293
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 38/138 (27%), Gaps = 10/138 (7%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
L+ + +V + + GE L E ++ + + + + +
Sbjct: 44 ALASAKVDVVPTVGVLVANRPLKYGERLTEEDIRVVDWPENAVPEGAFTEMAALFPETGA 103
Query: 74 RVLLPDHVIPLSVLHRPYVISR-GAKVRIILT----QGNMTISTAGIALSDA--SIGDVI 126
+ +++ G + IS + GDV+
Sbjct: 104 NERFVLRAMEKDEAIMEVKVTKPGELAGLTSRLEKGMRAFAISVDVASGVSGFLRPGDVV 163
Query: 127 AVKNIDTGVMVSGSVVDT 144
V + +SG+V
Sbjct: 164 DVYWTGS---LSGAVEGA 178
>gi|312199830|ref|YP_004019891.1| SAF domain protein [Frankia sp. EuI1c]
gi|311231166|gb|ADP84021.1| SAF domain protein [Frankia sp. EuI1c]
Length = 287
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 13/126 (10%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA---H 62
++ S+ + + A V + AG V++ L ++ S+
Sbjct: 52 LIVLVSVVLGARLFATADRTSAWVAAKADLPAGHVVSAGDLVTVRAQLSDATAGRYYPGR 111
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+K+VVG R + +I S + V I++ G L D +
Sbjct: 112 RLKEVVGGTLARPVGAGDLISGSDF-AGPDTAATRLVPIVVQAGR---------LPDLAP 161
Query: 123 GDVIAV 128
GD + V
Sbjct: 162 GDHVDV 167
>gi|257790639|ref|YP_003181245.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243]
gi|257474536|gb|ACV54856.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243]
Length = 432
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 22/52 (42%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
+ VV + + AGE + E+ L+ V + + A + DV G +
Sbjct: 257 NVVVTNRDVAAGETITEADLETQAVPKAYCPTDAATKVSDVAGHTSLTTQTA 308
>gi|111022595|ref|YP_705567.1| hypothetical protein RHA1_ro05629 [Rhodococcus jostii RHA1]
gi|110822125|gb|ABG97409.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 237
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 20/56 (35%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
VV + + G VL ++ ++ + + + ++ DV G +
Sbjct: 70 VVVAARDLQPGVVLTDADVELVDLEAGTLPDGAVTALADVDGRTLAGPTRAGEALT 125
>gi|218848027|ref|YP_002454867.1| hypothetical secreted protein [Bacillus cereus G9842]
gi|218546158|gb|ACK98551.1| hypothetical secreted protein [Bacillus cereus G9842]
Length = 303
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 51/149 (34%), Gaps = 26/149 (17%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL--LPDHVIPLS 85
VV I + + E + S I A ++V+G T+ + + +
Sbjct: 38 VVVTKQDIAPHTKITADMIAEKEFPVSGIPPKTALKKEEVLGKWTKDGYGIAANSYMNST 97
Query: 86 VLHRPYVISRGAKVRIILTQGNMTI-----STAGIA--------------LSDASIGDVI 126
L + ++ + + + T+ ++ G A L +G +
Sbjct: 98 KLAKEEELTDAGVISLKEGEHAFTLPVDIETSNGNAIVPNTYVDLYLAANLDAEKLGQAV 157
Query: 127 AVKNIDTGVMVSGSV----VDTGTVRVVV 151
++N++ +S +V + VRV+
Sbjct: 158 GIQNLE-KKFISPTVKYFGLAAKKVRVIS 185
>gi|312138618|ref|YP_004005954.1| hypothetical protein REQ_11700 [Rhodococcus equi 103S]
gi|311887957|emb|CBH47269.1| hypothetical protein REQ_11700 [Rhodococcus equi 103S]
Length = 206
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 34/118 (28%), Gaps = 10/118 (8%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVI----GHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57
D R + L V + L + +V + + G VL ++ + + ++
Sbjct: 9 DTARRVTAGVLIVAAGVLLLRDGLRDSGAPVLVAAHDLTPGTVLTPDDVRVVARPDPDLP 68
Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIP------LSVLHRPYVISRGAKVRIILTQGNMT 109
+ D G + ++ + V + LT ++
Sbjct: 69 EGSVRVVADASGRTVASPVRAGEMLTDVRLLGPRLTEAAAGAPDARMVPVRLTDPGLS 126
>gi|297618080|ref|YP_003703239.1| Flp pilus assembly protein CpaB [Syntrophothermus lipocalidus DSM
12680]
gi|297145917|gb|ADI02674.1| Flp pilus assembly protein CpaB [Syntrophothermus lipocalidus DSM
12680]
Length = 242
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 39/117 (33%), Gaps = 5/117 (4%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + I V+ ++K V + +VVG V ++ I
Sbjct: 38 LVQVVVAATDIPKNSVITREKVKLELVPAQFAHPAAVRDLDEVVGRVAASYIVAGEEILS 97
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK---NIDTGVM 136
+ + + + + + +++ ++ + GD + V + +G
Sbjct: 98 AKIISDAEKTNKLAYAVPMGKRAVSVPVNAVSGVSGLVRPGDRVDVIATVELASGQE 154
>gi|326202872|ref|ZP_08192739.1| SAF domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986949|gb|EGD47778.1| SAF domain protein [Clostridium papyrosolvens DSM 2782]
Length = 216
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 31/91 (34%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
Y+ + + VV + I G V+ E L++ QV S + I +V G
Sbjct: 26 AYIFTKYPINTEKTVAVVVATENIKEGTVIEEGFLRKKQVYASGVNSGVETEIGNVAGKK 85
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRII 102
+ D I L R + II
Sbjct: 86 ALTNIHRDDYIRAHDLLERKDWYRDDERIII 116
>gi|51468905|emb|CAE47778.1| pilus assembling protein [Bdellovibrio bacteriovorus]
Length = 314
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 44/115 (38%), Gaps = 6/115 (5%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
VV I + + ++ ++ ++ I+ + +++G V + ++
Sbjct: 54 TKRVVVAKEDIAEMQTIYDTMVETKELPADFIQPDAITIPDEIIGNVAAVPIRKGQMVVK 113
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTI---STAGIALSDASIGDVIAVK-NIDTGV 135
+ L G +++ ++ +TI G+A GD I + +D+G
Sbjct: 114 NNLL-TPGPDTGISLQVAPSKRAVTIPVDEVRGVAKLI-RPGDRIDIYAAVDSGK 166
>gi|31792181|ref|NP_854674.1| hypothetical protein Mb1017c [Mycobacterium bovis AF2122/97]
gi|121636917|ref|YP_977140.1| hypothetical protein BCG_1045c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|215402806|ref|ZP_03414987.1| hypothetical protein Mtub0_03760 [Mycobacterium tuberculosis
02_1987]
gi|215410589|ref|ZP_03419397.1| hypothetical protein Mtub9_04524 [Mycobacterium tuberculosis
94_M4241A]
gi|215426268|ref|ZP_03424187.1| hypothetical protein MtubT9_07731 [Mycobacterium tuberculosis T92]
gi|215445138|ref|ZP_03431890.1| hypothetical protein MtubT_04052 [Mycobacterium tuberculosis T85]
gi|224989389|ref|YP_002644076.1| hypothetical protein JTY_1017 [Mycobacterium bovis BCG str. Tokyo
172]
gi|260185899|ref|ZP_05763373.1| hypothetical protein MtubCP_07697 [Mycobacterium tuberculosis
CPHL_A]
gi|260200017|ref|ZP_05767508.1| hypothetical protein MtubT4_07787 [Mycobacterium tuberculosis T46]
gi|289442410|ref|ZP_06432154.1| hypothetical protein TBLG_03153 [Mycobacterium tuberculosis T46]
gi|289446571|ref|ZP_06436315.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289744726|ref|ZP_06504104.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289749518|ref|ZP_06508896.1| hypothetical protein TBDG_01743 [Mycobacterium tuberculosis T92]
gi|289757073|ref|ZP_06516451.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294995178|ref|ZP_06800869.1| hypothetical protein Mtub2_11847 [Mycobacterium tuberculosis 210]
gi|298524484|ref|ZP_07011893.1| hypothetical protein TBAG_03051 [Mycobacterium tuberculosis
94_M4241A]
gi|31617769|emb|CAD93878.1| HYPOTHETICAL PROTEIN Mb1017c [Mycobacterium bovis AF2122/97]
gi|121492564|emb|CAL71032.1| Hypothetical protein BCG_1045c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224772502|dbj|BAH25308.1| hypothetical protein JTY_1017 [Mycobacterium bovis BCG str. Tokyo
172]
gi|289415329|gb|EFD12569.1| hypothetical protein TBLG_03153 [Mycobacterium tuberculosis T46]
gi|289419529|gb|EFD16730.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289685254|gb|EFD52742.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289690105|gb|EFD57534.1| hypothetical protein TBDG_01743 [Mycobacterium tuberculosis T92]
gi|289712637|gb|EFD76649.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298494278|gb|EFI29572.1| hypothetical protein TBAG_03051 [Mycobacterium tuberculosis
94_M4241A]
gi|326904784|gb|EGE51717.1| hypothetical protein TBPG_02700 [Mycobacterium tuberculosis W-148]
Length = 218
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 27/86 (31%), Gaps = 3/86 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFA---SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57
+ RF + + + +L + VV + + G L ++ + + + +
Sbjct: 26 VRARRFAAAGLVMLAGVAALRSNPEDDRAEVVVAAHDLRPGTALTPGDVRLEKRSATTLP 85
Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIP 83
+ VVG V+
Sbjct: 86 DGSQADLDAVVGSTLASPTRRGEVLT 111
>gi|229495106|ref|ZP_04388852.1| SAF domain protein [Rhodococcus erythropolis SK121]
gi|229318037|gb|EEN83912.1| SAF domain protein [Rhodococcus erythropolis SK121]
Length = 234
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 23/62 (37%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
A+ VV S + G+V+ +S ++ ++ + + VVG +
Sbjct: 51 ATDTVAVVVSSRDLTPGQVIADSDVEIREIDSKQLPEGVVSDTDLVVGRTVAGPIRSGET 110
Query: 82 IP 83
+
Sbjct: 111 VT 112
>gi|215429850|ref|ZP_03427769.1| hypothetical protein MtubE_04012 [Mycobacterium tuberculosis
EAS054]
gi|289753048|ref|ZP_06512426.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289693635|gb|EFD61064.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length = 218
Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 27/86 (31%), Gaps = 3/86 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFA---SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57
+ RF + + + +L + VV + + G L ++ + + + +
Sbjct: 26 VRARRFAAAGLVILAGVAALRSNPEDDRAEVVVAAHDLRPGTALTPGDVRLEKRSATTLP 85
Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIP 83
+ VVG V+
Sbjct: 86 DGSQADLDAVVGSTLASPTRRGEVLT 111
>gi|228989141|ref|ZP_04149159.1| Hypothetical secreted protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228770568|gb|EEM19115.1| Hypothetical secreted protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 303
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 51/149 (34%), Gaps = 26/149 (17%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL--LPDHVIPLS 85
VV I + + E + S I A +DV+G T+ + + +
Sbjct: 38 VVVTKQDIAPHTKITADMIAEKEFPVSGIPPKTALKKEDVLGKWTKDGYGIAANSYMNST 97
Query: 86 VLHRPYVISRGAKVRIILTQGNMTI-----STAGIA--------------LSDASIGDVI 126
L + ++ + + + T+ ++ G A L +G +
Sbjct: 98 KLAKEEELTDAGVISLKEGEYAFTLPVDIETSNGNAIVPNTYVDLYLAANLDAEKLGQAV 157
Query: 127 AVKNIDTGVMVSGSV----VDTGTVRVVV 151
++N++ +S +V + VRV+
Sbjct: 158 GIQNLE-KKFISPTVKYFGLAAKKVRVIS 185
>gi|218290594|ref|ZP_03494696.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239378|gb|EED06575.1| SAF domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 261
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 9/92 (9%), Positives = 26/92 (28%), Gaps = 3/92 (3%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD---VVGLVTRRVLL 77
A+ V + I + S + + + + + + V+G+ +
Sbjct: 29 RANATVQVPVAAQTIPPYTTITSSDITWKSIPRNALPSDLVTNPVGRLTVLGVAAGDPIE 88
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMT 109
+ L V + ++ +T
Sbjct: 89 SSELAAQGSLQAYAASQDDVLVPVNVSPSPIT 120
>gi|228949326|ref|ZP_04111589.1| Hypothetical secreted protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228810309|gb|EEM56667.1| Hypothetical secreted protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 303
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 51/149 (34%), Gaps = 26/149 (17%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL--LPDHVIPLS 85
VV I + + E + S I A +DV+G T+ + + +
Sbjct: 38 VVVTKQDIAPHTKITADMIAEKEFPVSGIPPKTALKKEDVLGKWTKDGYGIAANSYMNST 97
Query: 86 VLHRPYVISRGAKVRIILTQGNMTI-----STAGIA--------------LSDASIGDVI 126
L + ++ + + + T+ ++ G A L +G +
Sbjct: 98 KLAKEEELTDAGVISLKEGEYAFTLPVDIETSNGNAIVPNTYVDLYLAANLDAEKLGQAV 157
Query: 127 AVKNIDTGVMVSGSV----VDTGTVRVVV 151
++N++ +S +V + VRV+
Sbjct: 158 GIQNLE-KKFISPTVKYFGLAAKKVRVIS 185
>gi|257057235|ref|YP_003135067.1| SAF domain-containing protein [Saccharomonospora viridis DSM 43017]
gi|256587107|gb|ACU98240.1| SAF domain-containing protein [Saccharomonospora viridis DSM 43017]
Length = 221
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 23/84 (27%), Gaps = 1/84 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V + + G L+E ++ +V + V +
Sbjct: 59 PVLVAARTLPLGSTLSEDDVRVAEVPAELRPDGALVTPDQAVDRRLVGAAREGEPLTDLR 118
Query: 87 LHRPYVISRGA-KVRIILTQGNMT 109
G+ V + LT MT
Sbjct: 119 FLDARNGPPGSTTVPLRLTDAGMT 142
>gi|39936739|ref|NP_949015.1| hypothetical protein RPA3677 [Rhodopseudomonas palustris CGA009]
gi|192292565|ref|YP_001993170.1| Flp pilus assembly protein CpaB [Rhodopseudomonas palustris TIE-1]
gi|39650595|emb|CAE29118.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
gi|192286314|gb|ACF02695.1| Flp pilus assembly protein CpaB [Rhodopseudomonas palustris TIE-1]
Length = 193
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 34/115 (29%), Gaps = 10/115 (8%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS------IKDVV 68
+ + +V I G+ + L+ + N+ D+
Sbjct: 36 PGAPAAPVAQTVEVLVAKNDIPLGQAVTPGDLQWQTWPAATASSNFIRRDLHPGATTDIG 95
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
G +TR + I L + + V + G IST AL + G
Sbjct: 96 GSITRAPFIAGEPIRRQKLVQ---ADGSSSVPAFVPTGMRAISTE-TALEPGATG 146
>gi|148656324|ref|YP_001276529.1| SAF domain-containing protein [Roseiflexus sp. RS-1]
gi|148568434|gb|ABQ90579.1| SAF domain [Roseiflexus sp. RS-1]
Length = 304
Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 9/85 (10%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKD 66
+ SL + + + V+ + I + L +++ ++ +
Sbjct: 30 IMTSLAAAAYGYIESRRTERVVIAARDIPYAAQITVDDLAVIELPLHRPVQVAGITDPQA 89
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPY 91
V+G R + + ++ +L
Sbjct: 90 VIGQYATRQIGMNDLLNPGMLAASP 114
>gi|116626780|ref|YP_828936.1| SAF domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229942|gb|ABJ88651.1| SAF domain [Candidatus Solibacter usitatus Ellin6076]
Length = 309
Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
LL + Y + + VV S + G +L +S LK + +I +++
Sbjct: 18 LLLTWFYYANA-VAPKQEKTLRVVVASRDMAIGTLLKKSDLKVVNYPEKDIPKGAVFTLQ 76
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
V + + + L +
Sbjct: 77 GAENRVVMVPMNTNEPVLQGKLSDTTTV 104
>gi|325108089|ref|YP_004269157.1| Flp pilus assembly protein CpaB [Planctomyces brasiliensis DSM
5305]
gi|324968357|gb|ADY59135.1| Flp pilus assembly protein CpaB [Planctomyces brasiliensis DSM
5305]
Length = 418
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 14/107 (13%), Positives = 35/107 (32%), Gaps = 4/107 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+V + I+ G +LN++ ++ + + S ++ ++ +I
Sbjct: 38 TVEVLVAAQDISPGVLLNQANCAFKKLPVEGVPSDAVRSKEEYAERGLLVPVMAGDIIRK 97
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAVK 129
S L I+ I ++I GD + ++
Sbjct: 98 SKLGARGEIAA--SASIPAGMRTVSIQVNDTKTHSGLLQPGDRVDLQ 142
>gi|42521753|ref|NP_967133.1| putative flp pilus assembly protein CpaB [Bdellovibrio
bacteriovorus HD100]
gi|39574283|emb|CAE77787.1| putative flp pilus assembly protein CpaB [Bdellovibrio
bacteriovorus HD100]
Length = 301
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 44/115 (38%), Gaps = 6/115 (5%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
VV I + + ++ ++ ++ I+ + +++G V + ++
Sbjct: 41 TKRVVVAKEDIAEMQTIYDTMVETKELPADFIQPDAITIPDEIIGNVAAVPIRKGQMVVK 100
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTI---STAGIALSDASIGDVIAVK-NIDTGV 135
+ L G +++ ++ +TI G+A GD I + +D+G
Sbjct: 101 NNLL-TPGPDTGISLQVAPSKRAVTIPVDEVRGVAKLI-RPGDRIDIYAAVDSGK 153
>gi|297568754|ref|YP_003690098.1| Flp pilus assembly protein CpaB [Desulfurivibrio alkaliphilus AHT2]
gi|296924669|gb|ADH85479.1| Flp pilus assembly protein CpaB [Desulfurivibrio alkaliphilus AHT2]
Length = 292
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
L+ A+ VV ++ GE + + ++ V + + S+++VV
Sbjct: 44 ALAKPEETAADWPRIVVAGQPLSRGEPITAAAVQL--VPARLVPPDSFSSLEEVVERRPA 101
Query: 74 RVLLPDHVIPLSVLHR 89
L +
Sbjct: 102 VSLQIGEPLTKRHFLP 117
>gi|184200331|ref|YP_001854538.1| hypothetical protein KRH_06850 [Kocuria rhizophila DC2201]
gi|183580561|dbj|BAG29032.1| hypothetical protein [Kocuria rhizophila DC2201]
Length = 223
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 32/115 (27%), Gaps = 4/115 (3%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V+ + + V + + AG L L Q + S + G +
Sbjct: 38 VVLRLAPPGARTAPVVTAAHEVPAGTSLGAGDLAVSQFPEALAPTGAYASPAEAQGQTSA 97
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
L P + S + G + +S + L GD + V
Sbjct: 98 VALTPGQPVTSS-TVLGPGVLTGQPTGTTA--ATVRVSDPAV-LRHVRPGDAVDV 148
>gi|269957599|ref|YP_003327388.1| SAF domain-containing protein [Xylanimonas cellulosilytica DSM
15894]
gi|269306280|gb|ACZ31830.1| SAF domain protein [Xylanimonas cellulosilytica DSM 15894]
Length = 227
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 40/130 (30%), Gaps = 18/130 (13%)
Query: 12 LYVLSLDSLFASV---IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+ S + + VVP+ + G L L + V + D V
Sbjct: 39 IAASSTVQVLRPAPPPMRSVVVPTHRLEPGVELRAGDLTVVSVPAALAPDGALTDTADAV 98
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA-----SIG 123
G V L + S++ G +V + G + + L DA G
Sbjct: 99 GRVPAVALEAGLPLSASLVA-------GGEVAALAPTGTVVVPVR---LDDATAALLRAG 148
Query: 124 DVIAVKNIDT 133
D + + + +
Sbjct: 149 DRVDLVSTAS 158
>gi|218460754|ref|ZP_03500845.1| flagellar basal body P-ring biosynthesis protein FlgA [Rhizobium
etli Kim 5]
Length = 95
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+G+AVVP+ +I G+ L+ S+L+E++VTN N+ G++A SI V GLV++R LLP I
Sbjct: 33 MGYAVVPTTIIYPGDTLSASQLQEVEVTNPNLAGDFAKSISQVEGLVSKRTLLPGRTI 90
>gi|225389628|ref|ZP_03759352.1| hypothetical protein CLOSTASPAR_03376 [Clostridium asparagiforme
DSM 15981]
gi|225044308|gb|EEG54554.1| hypothetical protein CLOSTASPAR_03376 [Clostridium asparagiforme
DSM 15981]
Length = 281
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 44/131 (33%), Gaps = 7/131 (5%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
+ + L + + V + + GE + + ++V N+ N AH
Sbjct: 15 SLVLAAVIAFVALPTIARQTNGKAEIVRITQPVLKGEKITSDNAEVVEVGGYNLPSNVAH 74
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA-- 120
S+ DV GL L I S + V S A I G + IS L+
Sbjct: 75 SLSDVEGLYVTADLAEGDYILTSKVSSVPVSSDVALNDI--PSGKVAISMTVKTLASGLS 132
Query: 121 ---SIGDVIAV 128
D+I +
Sbjct: 133 DKLQPNDIIRI 143
>gi|15608130|ref|NP_215505.1| hypothetical protein Rv0990c [Mycobacterium tuberculosis H37Rv]
gi|15840415|ref|NP_335452.1| hypothetical protein MT1019 [Mycobacterium tuberculosis CDC1551]
gi|148660771|ref|YP_001282294.1| hypothetical protein MRA_0997 [Mycobacterium tuberculosis H37Ra]
gi|167968056|ref|ZP_02550333.1| hypothetical protein MtubH3_08483 [Mycobacterium tuberculosis
H37Ra]
gi|254231287|ref|ZP_04924614.1| hypothetical protein TBCG_00979 [Mycobacterium tuberculosis C]
gi|254363908|ref|ZP_04979954.1| hypothetical protein TBHG_00974 [Mycobacterium tuberculosis str.
Haarlem]
gi|306775124|ref|ZP_07413461.1| hypothetical protein TMAG_00929 [Mycobacterium tuberculosis
SUMu001]
gi|306781961|ref|ZP_07420298.1| hypothetical protein TMBG_01621 [Mycobacterium tuberculosis
SUMu002]
gi|306783684|ref|ZP_07422006.1| hypothetical protein TMCG_00603 [Mycobacterium tuberculosis
SUMu003]
gi|306788039|ref|ZP_07426361.1| hypothetical protein TMDG_03597 [Mycobacterium tuberculosis
SUMu004]
gi|306792372|ref|ZP_07430674.1| hypothetical protein TMEG_00874 [Mycobacterium tuberculosis
SUMu005]
gi|306796774|ref|ZP_07435076.1| hypothetical protein TMFG_02809 [Mycobacterium tuberculosis
SUMu006]
gi|306802661|ref|ZP_07439329.1| hypothetical protein TMHG_00166 [Mycobacterium tuberculosis
SUMu008]
gi|306806841|ref|ZP_07443509.1| hypothetical protein TMGG_03063 [Mycobacterium tuberculosis
SUMu007]
gi|306967040|ref|ZP_07479701.1| hypothetical protein TMIG_03552 [Mycobacterium tuberculosis
SUMu009]
gi|306971230|ref|ZP_07483891.1| hypothetical protein TMJG_02659 [Mycobacterium tuberculosis
SUMu010]
gi|307078960|ref|ZP_07488130.1| hypothetical protein TMKG_01481 [Mycobacterium tuberculosis
SUMu011]
gi|307083518|ref|ZP_07492631.1| hypothetical protein TMLG_01695 [Mycobacterium tuberculosis
SUMu012]
gi|2052124|emb|CAB08150.1| HYPOTHETICAL PROTEIN Rv0990c [Mycobacterium tuberculosis H37Rv]
gi|13880585|gb|AAK45266.1| hypothetical protein MT1019 [Mycobacterium tuberculosis CDC1551]
gi|124600346|gb|EAY59356.1| hypothetical protein TBCG_00979 [Mycobacterium tuberculosis C]
gi|134149422|gb|EBA41467.1| hypothetical protein TBHG_00974 [Mycobacterium tuberculosis str.
Haarlem]
gi|148504923|gb|ABQ72732.1| hypothetical protein MRA_0997 [Mycobacterium tuberculosis H37Ra]
gi|308216331|gb|EFO75730.1| hypothetical protein TMAG_00929 [Mycobacterium tuberculosis
SUMu001]
gi|308325350|gb|EFP14201.1| hypothetical protein TMBG_01621 [Mycobacterium tuberculosis
SUMu002]
gi|308331529|gb|EFP20380.1| hypothetical protein TMCG_00603 [Mycobacterium tuberculosis
SUMu003]
gi|308335333|gb|EFP24184.1| hypothetical protein TMDG_03597 [Mycobacterium tuberculosis
SUMu004]
gi|308339140|gb|EFP27991.1| hypothetical protein TMEG_00874 [Mycobacterium tuberculosis
SUMu005]
gi|308342811|gb|EFP31662.1| hypothetical protein TMFG_02809 [Mycobacterium tuberculosis
SUMu006]
gi|308346664|gb|EFP35515.1| hypothetical protein TMGG_03063 [Mycobacterium tuberculosis
SUMu007]
gi|308350579|gb|EFP39430.1| hypothetical protein TMHG_00166 [Mycobacterium tuberculosis
SUMu008]
gi|308355270|gb|EFP44121.1| hypothetical protein TMIG_03552 [Mycobacterium tuberculosis
SUMu009]
gi|308359224|gb|EFP48075.1| hypothetical protein TMJG_02659 [Mycobacterium tuberculosis
SUMu010]
gi|308363136|gb|EFP51987.1| hypothetical protein TMKG_01481 [Mycobacterium tuberculosis
SUMu011]
gi|308366793|gb|EFP55644.1| hypothetical protein TMLG_01695 [Mycobacterium tuberculosis
SUMu012]
gi|323720557|gb|EGB29638.1| hypothetical protein TMMG_02985 [Mycobacterium tuberculosis
CDC1551A]
Length = 218
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 27/86 (31%), Gaps = 3/86 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFA---SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57
+ RF + + + +L + VV + + G L ++ + + + +
Sbjct: 26 VRARRFAAAGLVMLAGVAALRSNPEDDRSEVVVAAHDLRPGTALTPGDVRLEKRSATTLP 85
Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIP 83
+ VVG V+
Sbjct: 86 DGSQADLDAVVGSTLASPTRRGEVLT 111
>gi|309790167|ref|ZP_07684739.1| SAF domain protein [Oscillochloris trichoides DG6]
gi|308227752|gb|EFO81408.1| SAF domain protein [Oscillochloris trichoides DG6]
Length = 274
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKD 66
L ++ + L L + VV + G+ ++ L + V
Sbjct: 31 LLGAVTLAILGFLESRKSETVVVMVRDVPYGQQISAEDLGTVTVPLHRPAQLAGVSDPAT 90
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPY 91
VVG R L + ++ S+L
Sbjct: 91 VVGQYAARNLGSNDLLQPSMLMAAP 115
>gi|118619767|ref|YP_908099.1| hypothetical protein MUL_4696 [Mycobacterium ulcerans Agy99]
gi|118571877|gb|ABL06628.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length = 224
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 6/57 (10%), Positives = 19/57 (33%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
VV + ++ G L + ++ + + + + +VG ++
Sbjct: 55 EVVVAARDLSPGTPLTIADVRLETRSAATLPDGPQTDVGALVGATLASPTRRGEMLT 111
>gi|152967080|ref|YP_001362864.1| SAF domain protein [Kineococcus radiotolerans SRS30216]
gi|151361597|gb|ABS04600.1| SAF domain protein [Kineococcus radiotolerans SRS30216]
Length = 241
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 6/119 (5%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+L + +V I G+ + + L +V A ++ + VG
Sbjct: 49 SALVVHRSGDRVDVLVARHDIAPGQRITAADLGTARVAADGAAVVPAAALGNFVGTYATS 108
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
+ D ++ ++ G V + + + GDV+ + +
Sbjct: 109 RVPADTLLNRTMFLA------GDTVPADAAVVGVVLGAEQRPTDALAAGDVVRAFLVAS 161
>gi|220913319|ref|YP_002488628.1| SAF domain protein [Arthrobacter chlorophenolicus A6]
gi|219860197|gb|ACL40539.1| SAF domain protein [Arthrobacter chlorophenolicus A6]
Length = 242
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 30/106 (28%), Gaps = 23/106 (21%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH---- 80
A+ + + AG + S L ++V + + G L
Sbjct: 67 TVTALSAARDLPAGTAVTASDLVPVRVPPGLLSEGVLSGQAEAAGKQLATPLRKGQLVTD 126
Query: 81 -------------------VIPLSVLHRPYVISRGAKVRIILTQGN 107
+ ++ ++S G V ++LT GN
Sbjct: 127 VQLLGPGLLTGTPPGSAAVPLRMADASSIQLVSPGQLVNVVLTSGN 172
>gi|76663414|emb|CAE47790.1| pilus assembling protein [Bdellovibrio bacteriovorus]
Length = 302
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 44/115 (38%), Gaps = 6/115 (5%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
VV I + + ++ ++ ++ I+ + +++G V + +I
Sbjct: 41 TKRVVVAKEDIAEMQTVYDTMVETKELPADFIQPDAITVPDEIIGNVAAVPIRKGQMIVK 100
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTI---STAGIALSDASIGDVIAVK-NIDTGV 135
+ L G +++ ++ +TI G+A GD I + +D+G
Sbjct: 101 NNLL-TPGPDTGISLQVAPSKRAVTIPVDEVRGVAKLI-RPGDRIDIYAAVDSGK 153
>gi|148822199|ref|YP_001286953.1| hypothetical protein TBFG_11008 [Mycobacterium tuberculosis F11]
gi|218752660|ref|ZP_03531456.1| hypothetical protein MtubG1_04075 [Mycobacterium tuberculosis GM
1503]
gi|253799982|ref|YP_003032983.1| hypothetical protein TBMG_02999 [Mycobacterium tuberculosis KZN
1435]
gi|254549974|ref|ZP_05140421.1| hypothetical protein Mtube_05853 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289555228|ref|ZP_06444438.1| hypothetical protein TBXG_02978 [Mycobacterium tuberculosis KZN
605]
gi|289761124|ref|ZP_06520502.1| hypothetical protein TBIG_02544 [Mycobacterium tuberculosis GM
1503]
gi|297633515|ref|ZP_06951295.1| hypothetical protein MtubK4_05303 [Mycobacterium tuberculosis KZN
4207]
gi|297730500|ref|ZP_06959618.1| hypothetical protein MtubKR_05383 [Mycobacterium tuberculosis KZN
R506]
gi|313657829|ref|ZP_07814709.1| hypothetical protein MtubKV_05383 [Mycobacterium tuberculosis KZN
V2475]
gi|148720726|gb|ABR05351.1| hypothetical protein TBFG_11008 [Mycobacterium tuberculosis F11]
gi|253321485|gb|ACT26088.1| hypothetical protein TBMG_02999 [Mycobacterium tuberculosis KZN
1435]
gi|289439860|gb|EFD22353.1| hypothetical protein TBXG_02978 [Mycobacterium tuberculosis KZN
605]
gi|289708630|gb|EFD72646.1| hypothetical protein TBIG_02544 [Mycobacterium tuberculosis GM
1503]
gi|328459724|gb|AEB05147.1| hypothetical protein TBSG_03018 [Mycobacterium tuberculosis KZN
4207]
Length = 218
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 27/86 (31%), Gaps = 3/86 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFA---SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57
+ RF + + + +L + VV + + G L ++ + + + +
Sbjct: 26 VRARRFAAAGLVMLAGVAALRSNPEDDRSEVVVAAQDLRPGTALTPGDVRLEKRSATTLP 85
Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIP 83
+ VVG V+
Sbjct: 86 DGSQADLDAVVGSTLASPTRRGEVLT 111
>gi|84685163|ref|ZP_01013062.1| pilus assembly protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666895|gb|EAQ13366.1| pilus assembly protein [Rhodobacterales bacterium HTCC2654]
Length = 275
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 23/88 (26%), Gaps = 1/88 (1%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + + I GE + L + S ++G
Sbjct: 32 QAAPTVAVPETVVLIAAARDIRFGEPIRRDDLVPQTWPADLVPTGAFDSATVLLGAEGTA 91
Query: 75 VLLPDHVIPLSVLHRPYVISR-GAKVRI 101
I + +S GA V I
Sbjct: 92 PRRATQTIREGDVVLAANVSEFGASVTI 119
>gi|159043679|ref|YP_001532473.1| SAF domain-containing protein [Dinoroseobacter shibae DFL 12]
gi|157911439|gb|ABV92872.1| SAF domain protein [Dinoroseobacter shibae DFL 12]
Length = 280
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 42/139 (30%), Gaps = 8/139 (5%)
Query: 5 RFLLFFSLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
RF + ++ L A+V + V I GE + + +++++ + +
Sbjct: 26 RFDQYQTVVAKQQQKLAAAVDVVEVYVMDTPIRYGEKIGKDDVRKVRWPADALPEGAFQT 85
Query: 64 IKDVVGLVTRRVLLPDHVIPLSV-LHRPYVISRGAKVRIILTQG----NMTISTAGIALS 118
+ + R+ + + + V G + G IS +
Sbjct: 86 EEGLFPDAEGRLRTATRAMEANEPVLAVKVTEPGQDAGVSSRLGKGMRAFAISVTVTSGV 145
Query: 119 DA--SIGDVIAVKNIDTGV 135
GD + V +
Sbjct: 146 SGFLRPGDRVDVYWSGSSK 164
>gi|221195348|ref|ZP_03568403.1| SAF domain protein [Atopobium rimae ATCC 49626]
gi|221184535|gb|EEE16927.1| SAF domain protein [Atopobium rimae ATCC 49626]
Length = 262
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 28/94 (29%), Gaps = 5/94 (5%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + + VV + I AG+ ++ S + + + D++G +
Sbjct: 40 IERYGGEVVNLVVATKPIEAGDTISSSNTQVKSWVSDLAPEGSFTNADDIMGKQVTIPIS 99
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111
+ V + ++IS
Sbjct: 100 AGTPLTKLNFRTN-----ETTVTVPKGLVGISIS 128
>gi|332970970|gb|EGK09944.1| hypothetical protein HMPREF9374_2747 [Desmospora sp. 8437]
Length = 245
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 34/115 (29%), Gaps = 10/115 (8%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIG----------HAVVPSVVINAGEVLNESRLKEMQV 51
+ F + L LF V I + E+L + ++
Sbjct: 7 RAIIFAVLSVLLATVAGFLFLEETAALQAGLGAPTTVYVAKQEIASREILRPEFFEAKEI 66
Query: 52 TNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106
+ + + ++ G V+ L + S+L ++ G ++L
Sbjct: 67 PSKYVTSSMVTDPAEIDGQVSVVPLGKGDQLTKSMLKPARQLNDGESRMVLLRTS 121
>gi|126725968|ref|ZP_01741810.1| CpaB family protein [Rhodobacterales bacterium HTCC2150]
gi|126705172|gb|EBA04263.1| CpaB family protein [Rhodobacterales bacterium HTCC2150]
Length = 284
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 8/100 (8%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ V S ++ G++L E ++E V +I + D+ + ++
Sbjct: 47 LKTVFVASKTLDYGDMLTEEDVREAMVPVDSIPEGAFMAKADLFDENPNKPRQILRLMTE 106
Query: 85 SVLHRPYVISR-----GAKVRIILTQGNMTIS---TAGIA 116
+ + Y +++ G + +I T G+A
Sbjct: 107 NEILLAYKVTKPGEEAGVATLLTPGMRAFSIRVDDTTGVA 146
>gi|310642358|ref|YP_003947116.1| saf domain protein [Paenibacillus polymyxa SC2]
gi|309247308|gb|ADO56875.1| SAF domain protein [Paenibacillus polymyxa SC2]
Length = 325
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 11/105 (10%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
G AVV I+ GE + + LK ++V S N + +V G + L V+
Sbjct: 64 TGWAVV--RDISPGEQITSNDLKGIKVPGSQAPSNLLANKNEVSGTTAKIELKKGSVLTS 121
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK 129
+++ + L + + +L GD + ++
Sbjct: 122 AMITANEPTPKD------LRNRELKVVVLPSSLKS---GDEVDIR 157
>gi|115526291|ref|YP_783202.1| Flp pilus assembly CpaB [Rhodopseudomonas palustris BisA53]
gi|115520238|gb|ABJ08222.1| putative pilus assembly protein cpaB [Rhodopseudomonas palustris
BisA53]
Length = 268
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 39/135 (28%), Gaps = 21/135 (15%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD------VVG 69
+ +V + G+++ S ++ + N+ + V G
Sbjct: 36 AQVPTAQLKTVDVLVAKTNLALGQLVGPSDVQWQNWPADSANSNFIRRDQHPNFDTTVAG 95
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG-----D 124
+ R + I L V G+ + M + I+ + G D
Sbjct: 96 SIARSPFVAGEPIREVKL----VRPNGSGFMAAILPSGMRAISTEISPETGAGGFILPND 151
Query: 125 VIAV------KNIDT 133
+ V +N D+
Sbjct: 152 RVDVILSKRERNSDS 166
>gi|54026930|ref|YP_121172.1| hypothetical protein nfa49560 [Nocardia farcinica IFM 10152]
gi|54018438|dbj|BAD59808.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 221
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 17/61 (27%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+ VV + + G VL + L ++ + G + P V
Sbjct: 53 AARIPVVVAARELPPGTVLAAADLTVAPHEAGSLPAGAVRDPAVLTGATLTAAMHPGEVF 112
Query: 83 P 83
Sbjct: 113 T 113
>gi|328545280|ref|YP_004305389.1| Flp pilus assembly CpaB [polymorphum gilvum SL003B-26A1]
gi|326415022|gb|ADZ72085.1| Flp pilus assembly CpaB [Polymorphum gilvum SL003B-26A1]
Length = 258
Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 28/115 (24%), Gaps = 6/115 (5%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+V + I G+ L S + + + + + I
Sbjct: 44 TVAVLVATRDIRLGDHLAASDISWAEWPENVVPQGAITRQNQPDAEELMVGQIAKAPIYS 103
Query: 85 SVLHRPYVISRGA----KVRIILTQGNMTISTAGIALSDASI--GDVIAVKNIDT 133
R + R + + + + + I GD + V +
Sbjct: 104 GEPIRGQRLIRTDRGFMAAILPKGKRAIAVGVEAETTAGGFILPGDKVDVILTRS 158
>gi|134299960|ref|YP_001113456.1| SAF domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134052660|gb|ABO50631.1| SAF domain protein [Desulfotomaculum reducens MI-1]
Length = 234
Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VVP+ + ++ + +K + I+ A + +DVVG +TR L P+ I L+
Sbjct: 40 QVVVPTQPLGPKTLITDKMVKVKDIPVELIQPGTAIAPQDVVGKITRSELYPEEPIMLNR 99
Query: 87 LHRPYVISRGAKVRIILTQG 106
+++ G +I
Sbjct: 100 IYKDSNTD-GDLALLIPEGQ 118
>gi|258510599|ref|YP_003184033.1| SAF domain-containing protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257477325|gb|ACV57644.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 261
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 26/92 (28%), Gaps = 3/92 (3%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD---VVGLVTRRVLL 77
A V S I + S + QV + + + + V+G+ +
Sbjct: 29 RAHATVEIPVASQTILPYTTITPSDITWKQVPRAAVPSDLVTNPVGRLTVLGVAAGDPIE 88
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMT 109
+ L V + ++ +T
Sbjct: 89 SSELAAQGSLQAYAASQNDVLVPVNVSPSPIT 120
>gi|325964059|ref|YP_004241965.1| SAF domain-containing protein [Arthrobacter phenanthrenivorans
Sphe3]
gi|323470146|gb|ADX73831.1| SAF domain-containing protein [Arthrobacter phenanthrenivorans
Sphe3]
Length = 257
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 34/106 (32%), Gaps = 23/106 (21%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH---- 80
A+ + ++AG ++ + + ++V + + + D G L
Sbjct: 84 TVTALAAARDLSAGAAISPADVSAVRVPPGMMADGFLQNAGDAAGKQLAAPLRKGQLLTD 143
Query: 81 -------------------VIPLSVLHRPYVISRGAKVRIILTQGN 107
+ ++ ++S G V ++LT GN
Sbjct: 144 AQLLGPGLLAGTPPGSAAVPLRMADPSSIQLVSPGQLVNVVLTAGN 189
>gi|317124027|ref|YP_004098139.1| SAF domain protein [Intrasporangium calvum DSM 43043]
gi|315588115|gb|ADU47412.1| SAF domain protein [Intrasporangium calvum DSM 43043]
Length = 270
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 5/131 (3%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+L V +L VV I AG V++ S + + + A I VV
Sbjct: 66 AVALGVSALRPAATDAGLPTVVAVRAIAAGAVISASDVHVENRPVEHRPESAAADIAAVV 125
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G + +L + G + MT+ IAL+ G + +
Sbjct: 126 GRRAAAPIEA-----RGMLTGERLAGAGLLAGRSDDRAAMTVPVMDIALTGVEAGGRVDL 180
Query: 129 KNIDTGVMVSG 139
+G V
Sbjct: 181 YATGSGEQVVA 191
>gi|169628178|ref|YP_001701827.1| hypothetical protein MAB_1083c [Mycobacterium abscessus ATCC 19977]
gi|169240145|emb|CAM61173.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 224
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 7/72 (9%), Positives = 24/72 (33%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
+L+ A VV + ++ G +L+ ++ + + + + + G
Sbjct: 40 AALLAFRPDPADDRAEVVVAARDLSPGTILSSDDVRLEKRSTTILPDGVRTESATLFGAT 99
Query: 72 TRRVLLPDHVIP 83
+ ++
Sbjct: 100 LAGPVRRGEMLT 111
>gi|108801257|ref|YP_641454.1| hypothetical protein Mmcs_4293 [Mycobacterium sp. MCS]
gi|119870408|ref|YP_940360.1| SAF domain-containing protein [Mycobacterium sp. KMS]
gi|108771676|gb|ABG10398.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119696497|gb|ABL93570.1| SAF domain [Mycobacterium sp. KMS]
Length = 218
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 4/85 (4%)
Query: 3 CVRFLLFFSLYVLSLDSLFASV----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
R ++ L +L+ + S VV + + G L ES ++ + + +
Sbjct: 25 TARRIVAAVLVMLAAVAAVRSDPDGDQVDVVVAATDLTPGTELAESDVRVERRPLTTVPD 84
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIP 83
A V+G V+
Sbjct: 85 GAAVDPTAVIGATVAGPTRRGEVLT 109
>gi|56697918|ref|YP_168289.1| CpaB family protein [Ruegeria pomeroyi DSS-3]
gi|56679655|gb|AAV96321.1| CpaB family protein [Ruegeria pomeroyi DSS-3]
Length = 305
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 12/124 (9%), Positives = 26/124 (20%), Gaps = 7/124 (5%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
L V S + GE L + ++ + + I +
Sbjct: 51 LARERQARAQIVPTKTVYVASRPLRYGERLTKEDVRAVNWPENAIPEGTFLDAAMLFPER 110
Query: 72 TRRVLLPDHVIPLSVLHRPYVISR-GAKVRIILT----QGNMTISTAGIALSDA--SIGD 124
+ +++ G + I + GD
Sbjct: 111 QEENRYVLRAMEKDEAIMAIKVTKPGEDAGLTSQLARGMRAFAIKVDVTSGVSGFLRPGD 170
Query: 125 VIAV 128
+ V
Sbjct: 171 RVDV 174
>gi|207108996|ref|ZP_03243158.1| flagellar basal body P-ring biosynthesis protein FlgA [Helicobacter
pylori HPKX_438_CA4C1]
Length = 186
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 35/99 (35%), Gaps = 4/99 (4%)
Query: 17 LDSLFASVIG--HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ SVIG A + I E + + ++ ++ + D V +
Sbjct: 85 RLPVRYSVIGSMQAFKSASAIKKDENITANNTQKERIPFGALSNPLLEGAIDKV--SAKN 142
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
+ P+ ++ ++ + + + +G ++I +
Sbjct: 143 FIPPNTLLSADKTQALIIVRKNDIITGVYEEGQISIEIS 181
>gi|183984494|ref|YP_001852785.1| hypothetical protein MMAR_4524 [Mycobacterium marinum M]
gi|183177820|gb|ACC42930.1| conserved hypothetical membrane protein [Mycobacterium marinum M]
Length = 219
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 7/57 (12%), Positives = 19/57 (33%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
VV + ++ G L + ++ + + + + +VG V+
Sbjct: 55 EVVVAARDLSPGTPLTTADVRLEMRSAATLPDGSQTDVGALVGATLASPTRRGEVLT 111
>gi|220927571|ref|YP_002504480.1| SAF domain protein [Clostridium cellulolyticum H10]
gi|219997899|gb|ACL74500.1| SAF domain protein [Clostridium cellulolyticum H10]
Length = 218
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 31/91 (34%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
Y+ + L VV + I G V+ E L++ V S + + I ++ G
Sbjct: 26 AYIFTKYPLNMEKQVSVVVATADIKKGTVIEERFLRKKDVWESTVNSSIERDIGNIEGKK 85
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRII 102
+ D I L + + I+
Sbjct: 86 ALTDIYKDDYIRSCDLLEKKDWYKDDERIIV 116
>gi|78357402|ref|YP_388851.1| putative pilus assembly protein CpaB [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78219807|gb|ABB39156.1| putative pilus assembly protein CpaB [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 272
Score = 42.6 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 32/108 (29%), Gaps = 2/108 (1%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ F + + + ASV+ V + + G + ++ + S
Sbjct: 22 LVFRMMQAPARTAQPPKVASVM--LAVAAADMTKGTRIRAEQITMAEFLLQTAPAGAFSS 79
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111
++ G V + I + L V G I + + +
Sbjct: 80 ADELTGRVLASAVTAGEPITPARLVEDTVRYGGVSTMISPGKRAVAVK 127
>gi|257793127|ref|YP_003186525.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479819|gb|ACV60136.1| SAF domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 261
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 25/92 (27%), Gaps = 3/92 (3%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD---VVGLVTRRVLL 77
A V S I + S + V + + + + V+G+ +
Sbjct: 29 RAHATVEIPVASQTILPYTTITPSDITWKPVPRAAVPSDLVTNPVGRLTVLGVAAGDPIE 88
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMT 109
+ L V + ++ +T
Sbjct: 89 SSELAAQGSLQAYAASQNDVLVPVNVSPSPIT 120
>gi|83589202|ref|YP_429211.1| Flp pilus assembly CpaB [Moorella thermoacetica ATCC 39073]
gi|83572116|gb|ABC18668.1| Flp pilus assembly CpaB [Moorella thermoacetica ATCC 39073]
Length = 229
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ + +Y S + +VP+ INA + L QV + A
Sbjct: 28 LAVAVASGIYYQRYISTH-QAMTQVIVPAHNINAYTQIKPGDLTWRQVPVGAVEPGTARK 86
Query: 64 IKDVVGLVTRRVLLPDHVIP 83
D+VG V L +
Sbjct: 87 PDDLVGKVALAELYQGEQVR 106
>gi|308234323|ref|ZP_07665060.1| Flp pilus assembly protein CpaB [Atopobium vaginae DSM 15829]
Length = 272
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 7/87 (8%), Positives = 27/87 (31%), Gaps = 2/87 (2%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + + VV + + G+ + + + + + DV+G + +
Sbjct: 40 IASYGGDVVRLVVTAHPLQIGDTIKAEDIVVRDWVSDLAPKDAYLNSDDVIGKEVKVAVG 99
Query: 78 PDHVIPLSVLHRPY--VISRGAKVRII 102
+ + ++ +V +
Sbjct: 100 ENVPLSTMHFTESDDELVIPNGRVALS 126
>gi|328943875|ref|ZP_08241340.1| hypothetical protein HMPREF0091_10565 [Atopobium vaginae DSM 15829]
gi|327491844|gb|EGF23618.1| hypothetical protein HMPREF0091_10565 [Atopobium vaginae DSM 15829]
Length = 255
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 7/87 (8%), Positives = 27/87 (31%), Gaps = 2/87 (2%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + + VV + + G+ + + + + + DV+G + +
Sbjct: 23 IASYGGDVVRLVVTAHPLQIGDTIKAEDIVVRDWVSDLAPKDAYLNSDDVIGKEVKVAVG 82
Query: 78 PDHVIPLSVLHRPY--VISRGAKVRII 102
+ + ++ +V +
Sbjct: 83 ENVPLSTMHFTESDDELVIPNGRVALS 109
>gi|126729099|ref|ZP_01744913.1| CpaB family protein [Sagittula stellata E-37]
gi|126710089|gb|EBA09141.1| CpaB family protein [Sagittula stellata E-37]
Length = 288
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 35/126 (27%), Gaps = 9/126 (7%)
Query: 11 SLYVLSLDSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS-----I 64
+ V + SV V + I G+ + E ++ +
Sbjct: 32 TALVQARQQTHVSVPTKQIYVSARPIAYGQEITEEDIRLAPWPEEIMPEGIFDEETPLLT 91
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SI 122
+++ V R + I S + + S G + + I +
Sbjct: 92 ENMEPRVALRAIDAFEAIVPSKVSQ-PGGSAGLTHYLKPGESAFAIRVDVASGVSGFLRP 150
Query: 123 GDVIAV 128
GD + V
Sbjct: 151 GDRVDV 156
>gi|156741391|ref|YP_001431520.1| SAF domain-containing protein [Roseiflexus castenholzii DSM 13941]
gi|156232719|gb|ABU57502.1| SAF domain protein [Roseiflexus castenholzii DSM 13941]
Length = 298
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 7/71 (9%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDVVGLVTRRVLLPDH 80
+ ++ + + G+ + L +++ I+ V+G R + +
Sbjct: 44 SRRTERVIIAARDVPYGQQITIDDLAIIELPLHRPIQVAGITDPNIVIGQYATRQIGTND 103
Query: 81 VIPLSVLHRPY 91
++ +L
Sbjct: 104 LLNPGMLSPDP 114
>gi|262201376|ref|YP_003272584.1| SAF domain-containing protein [Gordonia bronchialis DSM 43247]
gi|262084723|gb|ACY20691.1| SAF domain protein [Gordonia bronchialis DSM 43247]
Length = 220
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 20/58 (34%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
+V + G+ L + ++V +S + S + +G + ++
Sbjct: 59 QPVLVAVHELRPGQPLTAEDVTVVRVPSSLMPDGALVSPAEGLGRTVAGRVRVGELVT 116
>gi|326331487|ref|ZP_08197777.1| putative membrane protein [Nocardioidaceae bacterium Broad-1]
gi|325950743|gb|EGD42793.1| putative membrane protein [Nocardioidaceae bacterium Broad-1]
Length = 224
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 34/105 (32%), Gaps = 7/105 (6%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
+V I G ++ +K +Q++ + S DV+G + ++
Sbjct: 60 TQDVLVARHTIERGSLIEADDIKRIQISADPALEALPGSSYGDVIGKKAGLDIAAGALLT 119
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
+ G V + ++T+ + GD + V
Sbjct: 120 EEATTSSPMPPDGMSVV------GLALATSHSPAVNLRTGDRVRV 158
>gi|84516632|ref|ZP_01003991.1| CpaB family protein [Loktanella vestfoldensis SKA53]
gi|84509668|gb|EAQ06126.1| CpaB family protein [Loktanella vestfoldensis SKA53]
Length = 277
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 28/105 (26%), Gaps = 5/105 (4%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ A V V + + GE L ++ + + + + + T+
Sbjct: 39 QIAAQALVTVDVYVTTRSVTYGEYLTADDVRLVPYPRDYLPEGTFATEQSLFPQGTQTPR 98
Query: 77 LPDHVIPLSVL-----HRPYVISRGAKVRIILTQGNMTISTAGIA 116
+ + + L SRG + + A
Sbjct: 99 VVVLPMIANELVLTTKVSEPGASRGLTALVEPGFRAFPVEGRVAA 143
>gi|312794261|ref|YP_004027184.1| SAF domain-containing protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181401|gb|ADQ41571.1| SAF domain protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 194
Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASV---IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
++ + ++ V L +F S + V +I+ GE+++++ + +++ + +
Sbjct: 4 RIIKLAVIPAVLVALLSYIFISRQTNMIQVPVAKNLIHQGEIIDDNDITFLKLPSYALPP 63
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101
+ +VG + V+ YV + I
Sbjct: 64 GTVKEKEQLVGKRAGVTRVAGDFFYDDVIKSVYVQVYEDETLI 106
>gi|300781680|ref|ZP_07091534.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300533387|gb|EFK54448.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length = 212
Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 29/76 (38%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ A+ + + ++ GE L+ ++ ++ + + + DV G +
Sbjct: 33 VTGRAANDPAVLAFTREVSPGEPLSADDVELQRMPEAIVPDGAFDQVSDVEGQIVASTAS 92
Query: 78 PDHVIPLSVLHRPYVI 93
V+ + L P ++
Sbjct: 93 AGEVVTPTRLLGPDLV 108
>gi|218710407|ref|YP_002418028.1| Flp pilus assembly protein CpaB [Vibrio splendidus LGP32]
gi|218323426|emb|CAV19603.1| Flp pilus assembly protein CpaB [Vibrio splendidus LGP32]
Length = 279
Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 24/70 (34%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V + A VV S I AG ++ E L + I N ++VG V
Sbjct: 62 VQPTVEVEAVERHPVVVASQEIEAGTIIEEQFLATKLMEVDWINENNFSDASELVGKVVA 121
Query: 74 RVLLPDHVIP 83
+ V+
Sbjct: 122 NTIYAGEVLH 131
>gi|187919323|ref|YP_001888354.1| Flp pilus assembly protein CpaB [Burkholderia phytofirmans PsJN]
gi|187717761|gb|ACD18984.1| Flp pilus assembly protein CpaB [Burkholderia phytofirmans PsJN]
Length = 269
Score = 42.2 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 28/72 (38%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
S ++ VV + IN G+ + LK ++++ I+ + G V + LL
Sbjct: 21 VSQSSNATTRVVVAAADINLGQRIGPDYLKLTDWPSNSVPPGSYSDIQKLDGRVLKESLL 80
Query: 78 PDHVIPLSVLHR 89
I + L
Sbjct: 81 RGEPILDAKLTP 92
>gi|284992651|ref|YP_003411205.1| SAF domain-containing protein [Geodermatophilus obscurus DSM 43160]
gi|284065896|gb|ADB76834.1| SAF domain protein [Geodermatophilus obscurus DSM 43160]
Length = 317
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 30/94 (31%), Gaps = 1/94 (1%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
+ A + + AG VL L + V ++ G Y + G R
Sbjct: 55 ARVVTAADATVPVWSAAGDLAAGTVLAAGDLVAVDVRLDDVAGAYLATSTRPEGRTLARA 114
Query: 76 LLPDHVIPLSVLHRPY-VISRGAKVRIILTQGNM 108
+ ++P + L P ++ V+ +
Sbjct: 115 VRNGELLPRTALEEPAELVQLALPVQAGYVPPGL 148
>gi|110679398|ref|YP_682405.1| pilus assembly domain-containing protein [Roseobacter denitrificans
OCh 114]
gi|109455514|gb|ABG31719.1| pilus assembly domain protein [Roseobacter denitrificans OCh 114]
Length = 282
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 28/111 (25%), Gaps = 7/111 (6%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
V + + G+ L ++ + + I I + T L +
Sbjct: 47 TQQVFVATRHLRYGDTLKPEDVRAVNWPVNAIPQGVFTDIAALFPEGTDEPRLIIRPMEP 106
Query: 85 SVLHRPYVISR-----GAKVRIILTQGNMTISTAGIALSDA--SIGDVIAV 128
S I+ G R+ I + GD + V
Sbjct: 107 SEAVLAVKITEPGEDIGLTTRLEKGMRAFAIRVDVASGVSGFLRPGDKVDV 157
>gi|302391028|ref|YP_003826848.1| Flp pilus assembly protein CpaB [Acetohalobium arabaticum DSM 5501]
gi|302203105|gb|ADL11783.1| Flp pilus assembly protein CpaB [Acetohalobium arabaticum DSM 5501]
Length = 278
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 6/133 (4%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
VV I E + S+++ QV + SI V + ++ +
Sbjct: 39 ASVVVAKQNIEPREQITRSKVQLKQVPQETVHSQAVTSISQAVEKFALKDIISGEQLLKP 98
Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVKNIDT----GVMVSG 139
L +S G + + +T+ ++ + GD + V ++ + V+
Sbjct: 99 RLLGKEEVSSGLAFNLADDKRAVTVPVTEVSGVAGFLTPGDYVDVVSVFSTYEAQQTVAK 158
Query: 140 SVVDTGTVRVVVK 152
+V+ V V +
Sbjct: 159 TVLQKVKVLAVAQ 171
>gi|117619605|ref|YP_855990.1| Flp pilus assembly protein CpaB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561012|gb|ABK37960.1| Flp pilus assembly protein CpaB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 296
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 19/150 (12%), Positives = 49/150 (32%), Gaps = 15/150 (10%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS---NIRGNY---AHSIKDVV 68
+ + ++ + +V + + AG ++ L + + N+ G + K +
Sbjct: 37 QAPEPAASARLAQVLVAAHRVQAGAFIHPEDLVWQTLPAAEEMNLPGLFLFGFTDTKALK 96
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVI 126
G + R L ++ L RP + +T++ A S G+ +
Sbjct: 97 GSLVTRTLEAGQIVSADDLVRPEQSHY-LSAMMAPGMRAVTLALGREAASHGLIRPGNRV 155
Query: 127 AVKNIDTGVMVS-----GSVVDTGTVRVVV 151
V + + V + +++
Sbjct: 156 DVI-LTSKHTHQRNAQGAEVTSKQSAEIIL 184
>gi|240169343|ref|ZP_04748002.1| hypothetical protein MkanA1_08521 [Mycobacterium kansasii ATCC
12478]
Length = 221
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 4/83 (4%)
Query: 5 RFLLFFSLYVLSLDSLFASVI----GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
R + L +L+ + S VV + + G L + ++ + + +
Sbjct: 29 RRIAAGGLVLLAGVAALRSNTDADGSKVVVAARDLRPGSALTYNDIRLETRSAATLPDGS 88
Query: 61 AHSIKDVVGLVTRRVLLPDHVIP 83
+ VVG V+
Sbjct: 89 QTDLGAVVGSTLAGPARRGEVLT 111
>gi|229819398|ref|YP_002880924.1| SAF domain protein [Beutenbergia cavernae DSM 12333]
gi|229565311|gb|ACQ79162.1| SAF domain protein [Beutenbergia cavernae DSM 12333]
Length = 207
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 24/61 (39%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V + I A + + + ++ + + + + + DVVG L + + +
Sbjct: 37 DVLVAAHDIAAAQEIVPADVRVVALPADAVPPDALDAADDVVGRQLAHALPAGYPLGPGM 96
Query: 87 L 87
+
Sbjct: 97 V 97
>gi|296156488|ref|ZP_06839326.1| Flp pilus assembly protein CpaB [Burkholderia sp. Ch1-1]
gi|295893087|gb|EFG72867.1| Flp pilus assembly protein CpaB [Burkholderia sp. Ch1-1]
Length = 269
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 29/72 (40%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
S ++ VV + IN G+ + LK + ++++ I+ + G V + LL
Sbjct: 21 VSQSSNATTKVVVAATDINLGQRIGPDFLKLTEWPSNSVPPGSFTDIQKLDGRVLKESLL 80
Query: 78 PDHVIPLSVLHR 89
+ + L
Sbjct: 81 HGEPVLEAKLTP 92
>gi|269217390|ref|ZP_06161244.1| Flp pilus assembly protein CpaB family protein [Actinomyces sp.
oral taxon 848 str. F0332]
gi|269213171|gb|EEZ79511.1| Flp pilus assembly protein CpaB family protein [Actinomyces sp.
oral taxon 848 str. F0332]
Length = 195
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 23/76 (30%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
+LS A VV + G L S L +V+ S++D+ V
Sbjct: 12 AAILSTIRGLAPATVSVVVAKKDLTPGTALGSSNLTIAEVSAELAPEGLTRSLEDLNERV 71
Query: 72 TRRVLLPDHVIPLSVL 87
+ + +
Sbjct: 72 LITSVPKGAPVTRKMT 87
>gi|223984146|ref|ZP_03634297.1| hypothetical protein HOLDEFILI_01590 [Holdemania filiformis DSM
12042]
gi|223963878|gb|EEF68239.1| hypothetical protein HOLDEFILI_01590 [Holdemania filiformis DSM
12042]
Length = 238
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 11/133 (8%), Positives = 41/133 (30%), Gaps = 6/133 (4%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ V L+F +++ + + + + ++ L + V ++ ++ +
Sbjct: 12 LTAVLVLIFSGIFLFRRELTRRLSLVSVPISVSTLPPRHLITVDDLTWIDVPSAYLQADI 71
Query: 61 AHSIKDVVG--LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN---MTISTAGI 115
++VG + +L V ++ + ++ + I
Sbjct: 72 LWEEAELVGLWTRLEGTIPAGSFFYQEMLDA-PEAMADFSVTLLNKDQAVFPLAVTISEI 130
Query: 116 ALSDASIGDVIAV 128
+ G + +
Sbjct: 131 SGQLMQPGQQVDL 143
>gi|126437236|ref|YP_001072927.1| SAF domain-containing protein [Mycobacterium sp. JLS]
gi|126237036|gb|ABO00437.1| SAF domain [Mycobacterium sp. JLS]
Length = 218
Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 20/57 (35%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
VV + + G L ES ++ + + + A V+G+ V+
Sbjct: 53 DVVVAATDLTPGMDLAESDVRVERRPLTTVPDGAAKDPTAVIGMTVAGPTRRGEVLT 109
>gi|163840497|ref|YP_001624902.1| hypothetical protein RSal33209_1753 [Renibacterium salmoninarum
ATCC 33209]
gi|162953973|gb|ABY23488.1| conserved hypothetical protein [Renibacterium salmoninarum ATCC
33209]
Length = 227
Score = 42.2 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 7/121 (5%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
A+ S + AG ++ S + ++V + I +G L ++ +
Sbjct: 53 TALAASKDLPAGSTISASDMVLLKVPLAAIPQAALARPSQAIGQQLAGALRKGQILTDTS 112
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVK--NIDT-GVMVSGSVVD 143
L +++ G + + +S AG A A G ++ V N D+ G +G+V+
Sbjct: 113 LLGQSLLT-GTPAGSVAV--PLRLSDAGTAKLVA-PGQLVTVVLTNEDSTGRAENGTVLA 168
Query: 144 T 144
Sbjct: 169 A 169
>gi|308069314|ref|YP_003870919.1| SAF domain protein [Paenibacillus polymyxa E681]
gi|305858593|gb|ADM70381.1| SAF domain protein [Paenibacillus polymyxa E681]
Length = 328
Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
G AVV I+ GE + + LK ++V +S N +V G + L V+ +
Sbjct: 65 GWAVV--RDISPGEQIASNDLKGIKVPSSQTPSNLLTDKSEVSGTTAKIELKKGSVLTSA 122
Query: 86 VLHRPYVISRG 96
++ +
Sbjct: 123 MITADEPTPKD 133
>gi|20808475|ref|NP_623646.1| hypothetical protein TTE2077 [Thermoanaerobacter tengcongensis
MB4]
gi|20517094|gb|AAM25250.1| hypothetical protein TTE2077 [Thermoanaerobacter tengcongensis
MB4]
Length = 187
Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Query: 10 FSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
F L + V + INAG V+ + L + +++ + + +++VG
Sbjct: 14 FVFLAAFLILNSVQGTVNVVAAAKPINAGTVITQDMLTTKSIP-ASLAADLVKNPQEIVG 72
Query: 70 LVTRRVLLPDHVIPLSVLHRP 90
+ IP S++ +
Sbjct: 73 KSLNTSRVKGDFIPHSIVMQK 93
>gi|225023053|ref|ZP_03712245.1| hypothetical protein CORMATOL_03101 [Corynebacterium matruchotii
ATCC 33806]
gi|224944276|gb|EEG25485.1| hypothetical protein CORMATOL_03101 [Corynebacterium matruchotii
ATCC 33806]
Length = 216
Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 49/153 (32%), Gaps = 10/153 (6%)
Query: 4 VRFLLFFSLYVLS---LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+R ++ +L V + + VV S + AG + + + + V+ S + +
Sbjct: 16 LRKVVAATLMVTAVGITVTDRLHQHISVVVYSRDVAAGSRITAADVTVVHVSESVLPQDR 75
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ VG + ++ + ++S+ + I L+D
Sbjct: 76 LATTDAAVGNIVVASRSRGAMVSAADFVDSALVSQTMT-NTTSNDAGVKTHMVPITLADP 134
Query: 121 SI------GDVIAVKNIDTGVMVSGSVVDTGTV 147
++ GD I + + G V
Sbjct: 135 TLASLLRPGDTITIITAADDNSAPRVIAAGGKV 167
>gi|134295594|ref|YP_001119329.1| SAF domain-containing protein [Burkholderia vietnamiensis G4]
gi|134138751|gb|ABO54494.1| SAF domain protein [Burkholderia vietnamiensis G4]
Length = 314
Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
A+ V+ + + AG+ + +K + +++ VVG V R +
Sbjct: 39 PAVAANPAPVVIATRTLPAGQPIAADAVKLQAI--ASVPTGAVVDPATVVGRVPARDIPA 96
Query: 79 DHVIPLSVL 87
I L
Sbjct: 97 SAPITPDAL 105
>gi|296393686|ref|YP_003658570.1| SAF domain-containing protein [Segniliparus rotundus DSM 44985]
gi|296180833|gb|ADG97739.1| SAF domain protein [Segniliparus rotundus DSM 44985]
Length = 227
Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 34/104 (32%), Gaps = 4/104 (3%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
AVV + + G L + L ++ ++ + ++G + +
Sbjct: 51 AAAVVAAHDLRPGVALGPADLAVRSLSPGDVPAGAVADPRQLLGRTVAGPVRSGEALTDV 110
Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA-SIGDVIAV 128
+ P + I +++ L+D GDV+ V
Sbjct: 111 RIITPRLAG---LATAIPDARAVSVRLPDQTLADMLRPGDVVDV 151
>gi|188586926|ref|YP_001918471.1| Flp pilus assembly protein CpaB [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351613|gb|ACB85883.1| Flp pilus assembly protein CpaB [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 233
Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
VV + ++ G +L + L +V +++ G V ++ ++ V+ S +
Sbjct: 51 VVVATSNLDTGTILTQDHLDTRKVPEQTAHPQAVTDKEEITGEVLKQDVVEHEVLMSSRV 110
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAV 128
++ ++V I + M+++ ++ GD + V
Sbjct: 111 LGEEEANKLSEV-IPENKRAMSVAVDQVSGVAGFIQAGDYVDV 152
>gi|86740443|ref|YP_480843.1| hypothetical protein Francci3_1738 [Frankia sp. CcI3]
gi|86567305|gb|ABD11114.1| putative membrane protein [Frankia sp. CcI3]
Length = 230
Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 30/97 (30%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
+ +V + + G VL ++E++++ + A V+G
Sbjct: 52 CAAAGLVAGARVGSREPVLVLARPVTVGHVLAAEDVREVRISADGVDTIPAGDRDSVLGK 111
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN 107
L V+ + + V G + + +
Sbjct: 112 PVAYSLPAGTVLSRAAVGAAQVPPPGEAIAAVALKAG 148
>gi|120405786|ref|YP_955615.1| SAF domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119958604|gb|ABM15609.1| SAF domain [Mycobacterium vanbaalenii PYR-1]
Length = 217
Score = 41.9 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 3 CVRFLLFFSLYVLSLDSLFA----SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
R ++ +L VL+ + + + VV ++ G + + ++ + S +
Sbjct: 26 TARRVVAGALVVLAGVAAWRGDPQAEQSDVVVTLHDLSPGAEITAADVRVETRSASTVPE 85
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIP 83
+ VVG ++
Sbjct: 86 GAHSDVDAVVGATLAGPTRRGEIVT 110
>gi|118465730|ref|YP_880352.1| hypothetical protein MAV_1099 [Mycobacterium avium 104]
gi|118167017|gb|ABK67914.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 226
Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 4/83 (4%)
Query: 5 RFLLFFSLYVLSLDSLF----ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
R + +L VL+ + A VV + G L + ++ + + +
Sbjct: 29 RRIAAGTLVVLAAIAALRSDPAGDYAPVVVAEHDLRPGAALTAADVRLEKRLAATVPEGS 88
Query: 61 AHSIKDVVGLVTRRVLLPDHVIP 83
I V+G V+
Sbjct: 89 PAEIGAVLGSTLAGPARRGEVLT 111
>gi|257064753|ref|YP_003144425.1| Flp pilus assembly protein CpaB [Slackia heliotrinireducens DSM
20476]
gi|256792406|gb|ACV23076.1| Flp pilus assembly protein CpaB [Slackia heliotrinireducens DSM
20476]
Length = 273
Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 8/73 (10%), Positives = 21/73 (28%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + V + I GE ++E+ + + + + + V ++
Sbjct: 40 LARYGGEQTEVWVATRDIAPGETVDETNAEYRMWLVELLPHDAVSDLAGLESRVATSPIV 99
Query: 78 PDHVIPLSVLHRP 90
VI
Sbjct: 100 QGEVISAQRFVAD 112
>gi|298488960|ref|ZP_07006983.1| Flp pilus assembly protein RcpC/CpaB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298156458|gb|EFH97555.1| Flp pilus assembly protein RcpC/CpaB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 319
Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 19/144 (13%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + + A + L ++ + I +VG T R
Sbjct: 53 PPTPPVEDALRHNVVVLARDVPAYTPITAEDLTVERLKVA--PPGSFEHIDKLVGRSTWR 110
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV---- 128
L + + ++R I + + + + + + GD + V
Sbjct: 111 TLTAGTWLSENSFEAGGTLAR----MIRPHERALALQVDEVIGASGQLSPGDYVDVLLYL 166
Query: 129 ------KNIDTGVMVSG-SVVDTG 145
N + V+V V+ G
Sbjct: 167 PEDTSNLNRSSQVVVPALRVLGVG 190
>gi|296128692|ref|YP_003635942.1| SAF domain protein [Cellulomonas flavigena DSM 20109]
gi|296020507|gb|ADG73743.1| SAF domain protein [Cellulomonas flavigena DSM 20109]
Length = 235
Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 23/74 (31%)
Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
+ + AG L L + V G + D +G V L + SVL
Sbjct: 73 LAHDVPAGTALTAHDLVLVDVPVGTAPGGAFRAPDDALGQVPAVDLPARLPLTPSVLADA 132
Query: 91 YVISRGAKVRIILT 104
+ V + +
Sbjct: 133 QLAGPDGTVVVAVR 146
>gi|326383759|ref|ZP_08205444.1| SAF domain-containing protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326197523|gb|EGD54712.1| SAF domain-containing protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 182
Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 28/92 (30%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ LL + + S + + + G VL L + + + + +
Sbjct: 1 MALLLVIAATASVVYSHRRPDAPRVLTAAADLRPGTVLTADDLTSVPMPAATVPASALRD 60
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISR 95
VG + +I + L + ++
Sbjct: 61 TGKAVGQRLTGPVTRGEIITETRLLTSRLAAQ 92
>gi|71737039|ref|YP_276549.1| CpaB family Flp pilus assembly protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557592|gb|AAZ36803.1| Flp pilus assembly protein CpaB family [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 313
Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 19/144 (13%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + + A + L ++ + I +VG T R
Sbjct: 47 PPTPPVEDALRHNVVVLARDVPAYTPITAEDLTVERLKVA--PPGSFEHIDKLVGRSTWR 104
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV---- 128
L + + ++R I + + + + + + GD + V
Sbjct: 105 TLTAGTWLSENSFEAGGTLAR----MIRPHERALALQVDEVIGASGQLSPGDYVDVLLYL 160
Query: 129 ------KNIDTGVMVSG-SVVDTG 145
N + V+V V+ G
Sbjct: 161 PEDTSNLNRSSQVVVPALRVLGVG 184
>gi|288920028|ref|ZP_06414348.1| SAF domain protein [Frankia sp. EUN1f]
gi|288348592|gb|EFC82849.1| SAF domain protein [Frankia sp. EUN1f]
Length = 241
Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 36/105 (34%), Gaps = 10/105 (9%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIR---GNYAHSIKDVVGLVTRRVLLPDHVIP 83
V + + G + S L ++V A + ++VG L +I
Sbjct: 68 EVVTLTRPLARGTEVTPSDLAVVRVDVEGSGVRLTAPAAARGELVGRQALIDLPAGTLIS 127
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
++ + + V + +T+S + + G+ ++V
Sbjct: 128 PEMVGSVALPT--GTVTL-----GVTVSAQDLPSAAMRPGEQVSV 165
>gi|296118260|ref|ZP_06836841.1| putative secreted protein [Corynebacterium ammoniagenes DSM 20306]
gi|295968818|gb|EFG82062.1| putative secreted protein [Corynebacterium ammoniagenes DSM 20306]
Length = 223
Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 46/129 (35%), Gaps = 16/129 (12%)
Query: 8 LFFSLYVLSLDSLFASVIGH---AVVPSVVINAGEVLNESRLKEMQVTNSNIR-GNYAHS 63
+ + V + + S + +V + ++AG+ L + ++V + I H
Sbjct: 16 VIGVILVFAAVVVALSGLRENPEILVFARDVDAGQELTAADTHLVRVPHDVIPDEGALHD 75
Query: 64 IKDVVGLVTRRVLLPDHVIP----LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
+VVG + + + L ++ G V + L + ++ IS
Sbjct: 76 PDEVVGRIITAPAVAGEFVTELRLLGDELTSQLVPGGHMVPLKLAEPDL-ISLL------ 128
Query: 120 ASIGDVIAV 128
GD + V
Sbjct: 129 -HHGDTVNV 136
>gi|260892925|ref|YP_003239022.1| Flp pilus assembly protein CpaB [Ammonifex degensii KC4]
gi|260865066|gb|ACX52172.1| Flp pilus assembly protein CpaB [Ammonifex degensii KC4]
Length = 233
Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
VV + I L S LK + +S + I+D VG VT L+ V+
Sbjct: 38 YVSVVVAAQDIPVRTSLTPSLLKLQDLPSSCVHPLAVRRIEDAVGRVTTVPLVRGEVLLQ 97
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV------KNIDTGVM 136
S L + + + + +T++ ++ + GD + V ++ T
Sbjct: 98 SKLASSKDEKQELALSLQPGERAVTLAVNAVSGVGGVLKPGDRVDVVATFDLESQGTKTT 157
Query: 137 VSGSVVDTGTVRVVV 151
+ V VRV+
Sbjct: 158 YTALVASN--VRVLA 170
>gi|292491518|ref|YP_003526957.1| Flp pilus assembly protein CpaB [Nitrosococcus halophilus Nc4]
gi|291580113|gb|ADE14570.1| Flp pilus assembly protein CpaB [Nitrosococcus halophilus Nc4]
Length = 265
Score = 41.9 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 5/124 (4%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ A VV ++ I G+ + LK + N+ H V G V +
Sbjct: 34 PGPVEVVAPETAPVVVAALEIPFGQKIETMHLKVISWPADNMPEGIFHETSAVEGRVASQ 93
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVKNID 132
+ P I + + + +T+ + + G+ + V +
Sbjct: 94 KIYPGEPIMK-DRAVEQLGGSTLSAIVPRDKRAVTVRVNDVIGVAGFLLPGNQVDV--LS 150
Query: 133 TGVM 136
+ +
Sbjct: 151 SRKI 154
>gi|85373132|ref|YP_457194.1| pilus assembly protein CpaB [Erythrobacter litoralis HTCC2594]
gi|84786215|gb|ABC62397.1| pilus assembly protein CpaB [Erythrobacter litoralis HTCC2594]
Length = 371
Score = 41.9 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 35/124 (28%), Gaps = 10/124 (8%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--- 61
R + + + ++ +V + G ++ L ++ Y
Sbjct: 24 RSMFAGASAPEATAAVQEPQGPKVLVAQRGLPVGTIITADALGFQMWPEELVQDAYFIEG 83
Query: 62 -HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK-VRIILTQGNMTISTAGIALSD 119
I ++G V R + + ++S G + M T ++ +
Sbjct: 84 ESDITQLLGTVVRHPVTAGEPLTQ-----GTLVSPGDRGFLAAALGPGMRAITVPVSANT 138
Query: 120 ASIG 123
G
Sbjct: 139 GVAG 142
>gi|305681758|ref|ZP_07404562.1| SAF domain protein [Corynebacterium matruchotii ATCC 14266]
gi|305658231|gb|EFM47734.1| SAF domain protein [Corynebacterium matruchotii ATCC 14266]
Length = 216
Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 49/153 (32%), Gaps = 10/153 (6%)
Query: 4 VRFLLFFSLYVLS---LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+R ++ +L V + + VV S + AG + + + + V+ S + +
Sbjct: 16 LRKVVAATLMVTAVGITVTDRLHQHISVVVYSRNVAAGSRITATDVTVVHVSESVLPQDR 75
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ VG + ++ + ++S+ + I L+D
Sbjct: 76 LATTDAAVGNIVVASRSRGAMVSAADFVDSALVSQTMT-NTTSNDAGVKTHMVPITLADP 134
Query: 121 SI------GDVIAVKNIDTGVMVSGSVVDTGTV 147
++ GD I + + G V
Sbjct: 135 TLASLLRPGDTITIITAADDNSAPRVIAAGGKV 167
>gi|257483348|ref|ZP_05637389.1| CpaB family Flp pilus assembly protein [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 319
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 19/144 (13%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + + A + L ++ + I +VG T R
Sbjct: 53 PPTPPVEDALRHNVVVLARDVPAYTPITAEDLTVERLKVA--PPGSFEHIDKLVGRSTWR 110
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV---- 128
L + + ++R I + + + + + + GD + V
Sbjct: 111 TLTAGTWLSENSFEAGGTLAR----MIRPHERALALQVDEVIGASGQLSPGDYVDVLLYL 166
Query: 129 ------KNIDTGVMVSG-SVVDTG 145
N + V+V V+ G
Sbjct: 167 PEDTSNLNRSSQVVVPALRVLGVG 190
>gi|294102190|ref|YP_003554048.1| Flp pilus assembly protein CpaB [Aminobacterium colombiense DSM
12261]
gi|293617170|gb|ADE57324.1| Flp pilus assembly protein CpaB [Aminobacterium colombiense DSM
12261]
Length = 288
Score = 41.5 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 27/75 (36%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ + VV + +A ++ +K +++ S+I S+ +VVG + L
Sbjct: 32 KIARAERELVSVVVAARPKDAFSIITAEDVKVVRMPRSSIPTGEVLSLDEVVGKASMLAL 91
Query: 77 LPDHVIPLSVLHRPY 91
+ L
Sbjct: 92 SEGDPVLKGKLSLDP 106
>gi|218886984|ref|YP_002436305.1| N-acylneuraminate-9-phosphate synthase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757938|gb|ACL08837.1| N-acylneuraminate-9-phosphate synthase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 354
Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
+V + I AG V+ L + + I V+G R + D V+ S L
Sbjct: 299 LVAARPIAAGAVITRDDLTWKR-PAHGVSP---REIDAVLGKRARADIAEDTVLQWSHLE 354
>gi|320322729|gb|EFW78822.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. glycinea
str. B076]
gi|320330486|gb|EFW86465.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330873796|gb|EGH07945.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 319
Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 19/144 (13%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + + A + L ++ + I +VG T R
Sbjct: 53 PPTPPVEDALRHNVVVLARDVPAYTPITAEDLTVERLKVA--PPGSFEHIDKLVGRSTWR 110
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV---- 128
L + + ++R I + + + + + + GD + V
Sbjct: 111 TLTAGTWLSENSFEAGGTLAR----MIRPHERALALQVDEVIGASGQLSPGDYVDVLLYL 166
Query: 129 ------KNIDTGVMVSG-SVVDTG 145
N + V+V V+ G
Sbjct: 167 PEDTSNLNRSSQVVVPALRVLGVG 190
>gi|119716448|ref|YP_923413.1| SAF domain-containing protein [Nocardioides sp. JS614]
gi|119537109|gb|ABL81726.1| SAF domain [Nocardioides sp. JS614]
Length = 224
Score = 41.5 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 16/144 (11%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTR 73
+ + +V S I GE + L ++V+ + + G
Sbjct: 50 TAFAFTSVNDTQEVLVVSNDIKRGETIEAGDLAVVRVSVDPALTPVPGSQKAVLEGSRAA 109
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
L ++ + V G + ++++ A + GDV+ +
Sbjct: 110 VDLWAGTLLTAQAVTDNLVPGEGESLV------GVSLTPAQMPSEPLYGGDVVRIVTTPG 163
Query: 134 GV---------MVSGSVVDTGTVR 148
+ +VV V
Sbjct: 164 DQGEITDEDPVTIEATVVGVNRVE 187
>gi|294676058|ref|YP_003576673.1| Flp pilus assembly protein CpaB [Rhodobacter capsulatus SB 1003]
gi|294474878|gb|ADE84266.1| Flp pilus assembly protein CpaB [Rhodobacter capsulatus SB 1003]
Length = 291
Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 33/126 (26%), Gaps = 19/126 (15%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG---------LVT 72
A + VV + GE + L +++ ++ HS+ G +
Sbjct: 44 APQLVDVVVLRRPLAYGERFTAADLGVIKMQVGHLPAGIFHSVATPQGAPEEAQAASVFP 103
Query: 73 RRVLLPDHVIPLSVLHRPYV--------ISRGAKVRIILTQGNMTISTAGIALSDA--SI 122
P + + + + G + TIS
Sbjct: 104 GGETRPRAALRAYDAYEAILANKITAPGVDAGITASLSPNMRAFTISVDATTGVSGFLRP 163
Query: 123 GDVIAV 128
GD + V
Sbjct: 164 GDRVDV 169
>gi|219848639|ref|YP_002463072.1| SAF domain-containing protein [Chloroflexus aggregans DSM 9485]
gi|219542898|gb|ACL24636.1| SAF domain protein [Chloroflexus aggregans DSM 9485]
Length = 265
Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 1/84 (1%)
Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKD 66
L + + L A V+ + + G L+ L + + I+ S
Sbjct: 28 LIVTAVFTVIAFLEAGQSEPVVILARDVPYGHQLSADDLTVVLLPRHRPIQLTGIASPAQ 87
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRP 90
V+G R L + ++ S++
Sbjct: 88 VIGQYAARNLSANDLLQPSMVTAQ 111
>gi|86739485|ref|YP_479885.1| hypothetical protein Francci3_0772 [Frankia sp. CcI3]
gi|86566347|gb|ABD10156.1| hypothetical protein Francci3_0772 [Frankia sp. CcI3]
Length = 257
Score = 41.5 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 34/122 (27%), Gaps = 13/122 (10%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA---HSIKDVVGLVT 72
+ A VV V + AG ++ L + + + D++G
Sbjct: 50 ARLFASADATRQWVVAKVDLPAGHIIVAGDLATVSARLDERTSGHYYPGSRLDDLIGATL 109
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
R + ++ V II+ G L GD + V
Sbjct: 110 ARPVDTGELVSGPDF-AGQNTQPTRLVPIIVKAGR---------LPTLGPGDHVDVFVFQ 159
Query: 133 TG 134
+G
Sbjct: 160 SG 161
>gi|317122041|ref|YP_004102044.1| Flp pilus assembly protein CpaB [Thermaerobacter marianensis DSM
12885]
gi|315592021|gb|ADU51317.1| Flp pilus assembly protein CpaB [Thermaerobacter marianensis DSM
12885]
Length = 284
Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 9/133 (6%)
Query: 3 CVRFLLFFSLYVLSLDSLF-----ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR 57
R + + +L+ S + A+ VV + + A + + V + +
Sbjct: 5 SWRAVASLGVALLAGTSAYVLYLDATASLPVVVATQALQAPLKIEPGMVAVSHVPAAAVH 64
Query: 58 GNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIAL 117
VVG V RR + + + + G + + Q I
Sbjct: 65 PEAVSDPAAVVGRVLRRDVEAGEPLLAADVAAGQ--GAGLSLYLEEGQQAFFIPARLEQG 122
Query: 118 SDASI--GDVIAV 128
++ GD + V
Sbjct: 123 LGGAVEPGDRVDV 135
>gi|289625313|ref|ZP_06458267.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289647838|ref|ZP_06479181.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. aesculi
str. 2250]
gi|330867147|gb|EGH01856.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330871035|gb|EGH05744.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 319
Score = 41.5 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 19/144 (13%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + + A + L ++ + I +VG + R
Sbjct: 53 PPTPPVEDALRHNVVVLARDVPAYTPITAEDLTVERLKVA--PPGSFEHIDKLVGRSSWR 110
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV---- 128
L + + ++R I + + + + + + GD + V
Sbjct: 111 TLTAGTWLSENSFEAGGTLAR----MIRPHERALALQVDEVIGASGQLSPGDYVDVLLYL 166
Query: 129 ------KNIDTGVMVSG-SVVDTG 145
N + V+V V+ G
Sbjct: 167 PEDTSNLNRSSQVVVPALRVLGVG 190
>gi|316933040|ref|YP_004108022.1| Flp pilus assembly protein CpaB [Rhodopseudomonas palustris DX-1]
gi|315600754|gb|ADU43289.1| Flp pilus assembly protein CpaB [Rhodopseudomonas palustris DX-1]
Length = 266
Score = 41.5 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 48/153 (31%), Gaps = 26/153 (16%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK------DVVGLVT 72
+ +V I G+ + L+ ++ ++ D+ G +
Sbjct: 42 PVARMQTVEVLVAKNDIPLGQAVAPGDLQWQTWPSATASSHFIRRNDQPNATTDLAGSIA 101
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG-----DVIA 127
R + I L + G+ + M + I+ + G D +
Sbjct: 102 RSPFIAGEPIREQKLVKA----NGSGFMAAILPSGMRAISTEISPETGAGGFILPNDRVD 157
Query: 128 V------KNID--TG-VMVSGSVVDTGTVRVVV 151
V KN D +G +VS ++ VRV+
Sbjct: 158 VILSKREKNSDRPSGEQIVSEIILSN--VRVLA 188
>gi|300743849|ref|ZP_07072869.1| putative N-acetyl neuramic acid synthetase NeuB [Rothia
dentocariosa M567]
gi|300380210|gb|EFJ76773.1| putative N-acetyl neuramic acid synthetase NeuB [Rothia
dentocariosa M567]
Length = 747
Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
+V + I GEV+ E+ + ++ NY ++G +R + L
Sbjct: 405 LVATRSIAKGEVITEADVTVKS-PGRGLQPNYL---PQLLGRTIQRDVEEGSFFFEGDLK 460
Query: 89 RPYVISRG 96
V R
Sbjct: 461 DDLVTRRN 468
>gi|171317112|ref|ZP_02906315.1| Flp pilus assembly protein CpaB [Burkholderia ambifaria MEX-5]
gi|171097746|gb|EDT42573.1| Flp pilus assembly protein CpaB [Burkholderia ambifaria MEX-5]
Length = 308
Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
+ FA+ VV + + AG+ + LK + +VG V + +
Sbjct: 39 TTFAANPVPVVVATRALPAGQPIAADALKLQ--PIAPAPTGAFGDPAMLVGRVPAKEIAA 96
Query: 79 DHVIPL 84
I
Sbjct: 97 SSPIVA 102
>gi|330892475|gb|EGH25136.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. mori str.
301020]
Length = 319
Score = 41.5 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 19/144 (13%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + + A + L ++ + I +VG T R
Sbjct: 53 PPTPPVEDALRHNVVVLARDVPAYTPITAEDLTVERLKVA--PPGSFEHIDKLVGRSTWR 110
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV---- 128
L + + ++R I + + + + + + GD + V
Sbjct: 111 TLTAGTWLSENSFEAGGTLAR----MIRPHERALALQVDEVIGASGQLSPGDYVDVLLYL 166
Query: 129 ------KNIDTGVMVSG-SVVDTG 145
N + V+V V+ G
Sbjct: 167 PEDTSNLNRSSQVVVPALRVLGVG 190
>gi|302185188|ref|ZP_07261861.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. syringae
642]
Length = 319
Score = 41.5 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 19/144 (13%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + I A + L ++ + +I +VG + R
Sbjct: 53 PPTPPVEDALRHNVVVLARDIPAYTAITADDLTIERLKVA--PPGSFEAIDKIVGRSSWR 110
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK--- 129
L + S ++R I + + + + + + GD + V
Sbjct: 111 TLTAGSWLTESNFEAGGTLAR----MIRPHERALALQVDEVTGASGQLSPGDYVDVLLYL 166
Query: 130 -------NIDTGVMVSG-SVVDTG 145
N + V+V ++ G
Sbjct: 167 PEDASNPNRSSQVVVPALRILGVG 190
>gi|330989177|gb|EGH87280.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 319
Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 19/144 (13%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + + A + L ++ + I +VG T R
Sbjct: 53 PPTPPVEDALRHNVVVLARDVPAYTPITAEDLTVERLKVA--PPGSFEHIDKLVGRSTWR 110
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV---- 128
L + + ++R I + + + + + + GD + V
Sbjct: 111 TLTAGTWLSENSFEAGGTLAR----MIRPHERALALQVDEVIGASGQLSPGDYVDVLLYL 166
Query: 129 ------KNIDTGVMVSG-SVVDTG 145
N + V+V V+ G
Sbjct: 167 PEDTSNLNRSSQVVVPALRVLGVG 190
>gi|163733543|ref|ZP_02140986.1| pilus assembly domain protein [Roseobacter litoralis Och 149]
gi|161393331|gb|EDQ17657.1| pilus assembly domain protein [Roseobacter litoralis Och 149]
Length = 276
Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 29/124 (23%), Gaps = 7/124 (5%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
L V + + G+ LN ++ + + I I +
Sbjct: 28 LARAQQMQSAIVPTQPVFVATRHLRYGDTLNPEDVRAVNWPTNAIPDGIFTDIAVLFPEG 87
Query: 72 TRRVLLPDHVIPLSVLHRPYVISR-----GAKVRIILTQGNMTISTAGIALSDA--SIGD 124
T L + + I+ G R+ I GD
Sbjct: 88 TDEPRLIIRPMEPNEALLAVKITEPGEDIGLTTRLEKGMRAFAIRVDVATGVSGFLRPGD 147
Query: 125 VIAV 128
+ V
Sbjct: 148 KVDV 151
>gi|332982946|ref|YP_004464387.1| hypothetical protein Mahau_2401 [Mahella australiensis 50-1 BON]
gi|332700624|gb|AEE97565.1| hypothetical protein Mahau_2401 [Mahella australiensis 50-1 BON]
Length = 332
Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
VV + IN + + + S + G+ V+G +T +P +IP
Sbjct: 29 TKQVVVVTKEINDTMEITSDMITVKALPVSAVPGDVLTDPNAVIGKMTTVGRIPGDLIPK 88
Query: 85 SVLHRPYVI-SRGAKVRIILTQGN 107
S+L +P I + +V + + +
Sbjct: 89 SILAKPEDIAVKDNEVLLTMNIPS 112
>gi|331012567|gb|EGH92623.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 319
Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 19/144 (13%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + + A + L ++ + I +VG T R
Sbjct: 53 PPTPPVEDALRHNVVVLARDVPAYTPITAEDLTVERLKVA--PPGSFEHIDKLVGRSTWR 110
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV---- 128
L + + ++R I + + + + + + GD + V
Sbjct: 111 TLTAGTWLSENSFEAGGTLAR----MIRPHERALALQVDEVIGASGQLSPGDYVDVLLYL 166
Query: 129 ------KNIDTGVMVSG-SVVDTG 145
N + V+V V+ G
Sbjct: 167 PEDTSNLNRSSQVVVPALRVLGVG 190
>gi|299132282|ref|ZP_07025477.1| Flp pilus assembly protein CpaB [Afipia sp. 1NLS2]
gi|298592419|gb|EFI52619.1| Flp pilus assembly protein CpaB [Afipia sp. 1NLS2]
Length = 273
Score = 41.1 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 10/115 (8%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA------HSIKDVV 68
+ +V I G+ + +K + ++ +IKD+
Sbjct: 33 RVAAPVPQLETTDVLVAKSDIPLGQTITADDMKWQSWPAATASSSFVKKSERADAIKDMT 92
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
G + R L I + L + G+ + M + I+ + G
Sbjct: 93 GSIVRSPFLAGEPIRETKLVKA----NGSGFMAAILPSGMRAISTEISPETGAGG 143
>gi|114321312|ref|YP_742995.1| Flp pilus assembly protein CpaB-like protein [Alkalilimnicola
ehrlichii MLHE-1]
gi|114227706|gb|ABI57505.1| Flp pilus assembly protein CpaB-like protein [Alkalilimnicola
ehrlichii MLHE-1]
Length = 316
Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 36/111 (32%), Gaps = 8/111 (7%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
V + G+++ E+ + + ++V+GL + ++
Sbjct: 57 PVVFAVTELEPGQLVGEADIHTET--LRRVPPLAFSDPEEVIGLRVEAPIQEGELLTAPR 114
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVKNIDTGV 135
+SRG ++ + + IS + + GD + V +
Sbjct: 115 FSVASQVSRG----LLPGERAVAISVDDVIGVGGYLSPGDRVDVMLYLSQR 161
>gi|330976800|gb|EGH76835.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 329
Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 43/132 (32%), Gaps = 19/132 (14%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ VV + I A + L ++ + +I +VG + R L + S
Sbjct: 75 NVVVLAKDIPAYTAITADDLTIERLKVA--PPGSFEAIDKIVGRSSWRTLTAGSWLTESN 132
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK----------NIDTG 134
++R I + + + + + + GD + V N +
Sbjct: 133 FEAGGTLAR----MIRPHERALALQVDEVTGASGQLSPGDYVDVLLYLPEDVSNPNRSSQ 188
Query: 135 VMVSG-SVVDTG 145
V+V V+ G
Sbjct: 189 VVVPALRVLGVG 200
>gi|220918103|ref|YP_002493407.1| Flp pilus assembly protein CpaB [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955957|gb|ACL66341.1| Flp pilus assembly protein CpaB [Anaeromyxobacter dehalogenans
2CP-1]
Length = 309
Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 26/87 (29%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ V L + Y+ + + VV V I + L + + +
Sbjct: 33 LAAVGVALLLTRYMDARVAAVRVPTSGVVVAQVDIPVATPIKPEWLGVVPWPVTALPPGA 92
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVL 87
A +VG V + + S L
Sbjct: 93 ASEPAALVGQVAIVPITRGEAVLPSKL 119
>gi|296169796|ref|ZP_06851411.1| SAF domain protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895590|gb|EFG75289.1| SAF domain protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 225
Score = 41.1 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 23/83 (27%), Gaps = 4/83 (4%)
Query: 5 RFLLFFSLYVLSLDSLF----ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
R + L VL+ + A VV + G L + ++ + + +
Sbjct: 28 RRVAAGGLVVLAGLAALRANPAGDYADVVVADHDLRPGAALTPADVRLEKRLATTLPDGA 87
Query: 61 AHSIKDVVGLVTRRVLLPDHVIP 83
+ V V+
Sbjct: 88 LADVSAVANSTLTGPARRGEVLT 110
>gi|303233382|ref|ZP_07320051.1| Flp pilus assembly protein CpaB [Atopobium vaginae PB189-T1-4]
gi|302480511|gb|EFL43602.1| Flp pilus assembly protein CpaB [Atopobium vaginae PB189-T1-4]
Length = 335
Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 26/72 (36%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
+ + VV + + G+V+ S + + + + ++DVVG + L
Sbjct: 41 ARYGGETVELVVSTKALRVGDVIEPSDVVKRDWVSMLAPADAYTRMEDVVGKTVKVPLSE 100
Query: 79 DHVIPLSVLHRP 90
+ I +
Sbjct: 101 NAPITQTTFAAM 112
>gi|330830433|ref|YP_004393385.1| Flp pilus assembly protein CpaB [Aeromonas veronii B565]
gi|328805569|gb|AEB50768.1| Flp pilus assembly protein CpaB [Aeromonas veronii B565]
Length = 296
Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 43/145 (29%), Gaps = 13/145 (8%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY------AHSIKDVVGLVT 72
SL + +V + + AG ++ L+ + + R K + G +
Sbjct: 41 SLAPDRVAQVLVAAHRVQAGSFIHPEDLRWQALPEAEERNLPGLFLFGFTDTKALKGSLV 100
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAVKN 130
R L ++ L RP + +T++ A S G+ + V
Sbjct: 101 TRTLEAGQIVSADDLVRPEQSHY-LSAMMAPGMRAVTLALGREAASHGLIRPGNRVDVIL 159
Query: 131 IDTGVMVS----GSVVDTGTVRVVV 151
V + +++
Sbjct: 160 TSKHARQHNAQGAEVTSNQSAEIIL 184
>gi|269796338|ref|YP_003315793.1| SAF domain-containing protein [Sanguibacter keddieii DSM 10542]
gi|269098523|gb|ACZ22959.1| SAF domain-containing protein [Sanguibacter keddieii DSM 10542]
Length = 261
Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 23/69 (33%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V+ S VV S + AG L L+ +++ ++ VVG
Sbjct: 71 VVHRLSPTPEPRDPVVVASTALPAGTTLTADHLRTVRLPSAVTPEGAPDDADTVVGRTLA 130
Query: 74 RVLLPDHVI 82
+ V+
Sbjct: 131 VPVTTGTVL 139
>gi|116623254|ref|YP_825410.1| SAF domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226416|gb|ABJ85125.1| SAF domain [Candidatus Solibacter usitatus Ellin6076]
Length = 300
Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 8/84 (9%)
Query: 7 LLFFSLYVLSLD--------SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
L ++L V + A+ VV + + AG L+ +K V
Sbjct: 14 SLVWALMVSAAFFRLAGGGGRTRAASRKQVVVATRPLPAGSTLDRDAVKLRSVPEDVFPA 73
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVI 82
++DV+ + P+ +
Sbjct: 74 GAFSRVEDVLERPVISAIQPEEPV 97
>gi|167841424|ref|ZP_02468108.1| putative pilus assembly protein CpaB [Burkholderia thailandensis
MSMB43]
Length = 281
Score = 41.1 bits (95), Expect = 0.052, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 29/73 (39%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +S + V + +N GE L ++L+ + +++ +K + G V R L
Sbjct: 28 LVQTSSSAVTPVAVAATDVNLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHR 89
+ + L
Sbjct: 88 ARGEPVLGTKLAP 100
>gi|118469802|ref|YP_889718.1| hypothetical protein MSMEG_5481 [Mycobacterium smegmatis str. MC2
155]
gi|118171089|gb|ABK71985.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
Length = 216
Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 7/57 (12%), Positives = 17/57 (29%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
V + + G L ++ + S + + +VG + V+
Sbjct: 54 DVAVAARDLVPGTALTAEDVRLESRSASTLPDGAQSDVGAIVGATLAGPMRRGEVLT 110
>gi|167924331|ref|ZP_02511422.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
BCC215]
Length = 281
Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 29/73 (39%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +S + V + ++ GE L ++L+ + +++ +K + G V R L
Sbjct: 28 LVQTSSSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHR 89
+ + L
Sbjct: 88 ARGEPVLGTKLAP 100
>gi|147677784|ref|YP_001211999.1| flp pilus assembly protein CpaB [Pelotomaculum thermopropionicum
SI]
gi|146273881|dbj|BAF59630.1| flp pilus assembly protein CpaB [Pelotomaculum thermopropionicum
SI]
Length = 242
Score = 41.1 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 2/104 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
V I A + ++ + I A S +++VG + + +LP I
Sbjct: 40 RVAVARQRITARTRITAQMIELKDIPAKYINELAAVSPEEIVGKIAKSEILPGEQILRDR 99
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
L + + G + + +T++ ++ I GD + V
Sbjct: 100 LAQGSSATDGLAFMLQPGKRAVTVAVNEVSGLAGLIKPGDRVDV 143
>gi|254192395|ref|ZP_04898834.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
S13]
gi|169649153|gb|EDS81846.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
S13]
Length = 281
Score = 41.1 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 29/73 (39%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +S + V + ++ GE L ++L+ + +++ +K + G V R L
Sbjct: 28 LVQTSSSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHR 89
+ + L
Sbjct: 88 ARGEPVLGTKLAP 100
>gi|330938338|gb|EGH41970.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. pisi str.
1704B]
Length = 319
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 19/144 (13%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + I A + L ++ + +I +VG + R
Sbjct: 53 PPTPPVEDALRHNVVVLAKDIPANTAITADDLTIERLKVA--PPRSFEAIDKIVGRSSWR 110
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK--- 129
L + S ++R I + + + + + + GD + V
Sbjct: 111 TLTAGSWLTESNFEAGGTLAR----MIRPHERALALQVDEVTGASGQLSPGDYVDVLLYL 166
Query: 130 -------NIDTGVMVSG-SVVDTG 145
N + V+V ++ G
Sbjct: 167 PEDVSNPNRSSQVVVPALRILGVG 190
>gi|167744174|ref|ZP_02416948.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 14]
Length = 281
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 29/73 (39%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +S + V + ++ GE L ++L+ + +++ +K + G V R L
Sbjct: 28 LVQTSSSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHR 89
+ + L
Sbjct: 88 ARGEPVLGTKLAP 100
>gi|53723206|ref|YP_112191.1| pilus assembly-related, exported protein [Burkholderia pseudomallei
K96243]
gi|76817358|ref|YP_336468.1| pilus assembly transmembrane protein [Burkholderia pseudomallei
1710b]
gi|126444606|ref|YP_001064075.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
668]
gi|126455786|ref|YP_001076988.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1106a]
gi|167829714|ref|ZP_02461185.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 9]
gi|167899812|ref|ZP_02487213.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
7894]
gi|167916475|ref|ZP_02503566.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
112]
gi|217424287|ref|ZP_03455786.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
576]
gi|226194084|ref|ZP_03789685.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
Pakistan 9]
gi|237507313|ref|ZP_04520028.1| Flp pilus assembly protein CpaB [Burkholderia pseudomallei MSHR346]
gi|242313081|ref|ZP_04812098.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1106b]
gi|254182584|ref|ZP_04889178.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1655]
gi|254187135|ref|ZP_04893650.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
Pasteur 52237]
gi|254262844|ref|ZP_04953709.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1710a]
gi|254296484|ref|ZP_04963940.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
406e]
gi|52213620|emb|CAH39674.1| putative pilus assembly-related, exported protein [Burkholderia
pseudomallei K96243]
gi|76581831|gb|ABA51305.1| pilus assembly transmembrane protein [Burkholderia pseudomallei
1710b]
gi|126224097|gb|ABN87602.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
668]
gi|126229554|gb|ABN92967.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1106a]
gi|157806446|gb|EDO83616.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
406e]
gi|157934818|gb|EDO90488.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
Pasteur 52237]
gi|184213119|gb|EDU10162.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1655]
gi|217392752|gb|EEC32775.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
576]
gi|225934029|gb|EEH30015.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
Pakistan 9]
gi|234999518|gb|EEP48942.1| Flp pilus assembly protein CpaB [Burkholderia pseudomallei MSHR346]
gi|242136320|gb|EES22723.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1106b]
gi|254213846|gb|EET03231.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1710a]
Length = 281
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 29/73 (39%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +S + V + ++ GE L ++L+ + +++ +K + G V R L
Sbjct: 28 LVQTSSSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHR 89
+ + L
Sbjct: 88 ARGEPVLGTKLAP 100
>gi|319937910|ref|ZP_08012310.1| hypothetical protein HMPREF9488_03146 [Coprobacillus sp. 29_1]
gi|319806816|gb|EFW03455.1| hypothetical protein HMPREF9488_03146 [Coprobacillus sp. 29_1]
Length = 223
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Query: 6 FLLFFSLYVLSLDS-LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS- 63
F + F+ V F + +V + + G + ES L +V S++ NY +
Sbjct: 13 FSIVFAAIVSISLYFAFIGNMTDVLVVNQTVRGGTQITESMLSVKKVDKSSLPDNYLKAS 72
Query: 64 -IKDVVGLVTRRVLLPDHVIPLSVL 87
+VVG L V+ +
Sbjct: 73 LRDEVVGKYFDLGLTSGGVLTKDNI 97
>gi|222530414|ref|YP_002574296.1| hypothetical protein Athe_2455 [Caldicellulosiruptor bescii DSM
6725]
gi|222457261|gb|ACM61523.1| conserved hypothetical protein [Caldicellulosiruptor bescii DSM
6725]
Length = 194
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASV---IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
++ + ++ V L +F S + V +I+ GE++N++ + +++ + +
Sbjct: 4 RVIKLAVIPAVLVALLSYIFISRQTNMIQIPVAKNLIHQGEIINDNDITFLKLPSYALPR 63
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101
+ +VG + V+ YV + I
Sbjct: 64 GVIKEKEKLVGKRAGVTRVAGDFFYDDVIKTVYVQVYEDETLI 106
>gi|299067806|emb|CBJ39017.1| Putative pilus assembly (cpaB), transmembrane protein [Ralstonia
solanacearum CMR15]
Length = 295
Score = 40.7 bits (94), Expect = 0.058, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 1/88 (1%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
V +V +N G+ L+ ++ + +++ + G VTR L P +
Sbjct: 43 TTKVAVAAVDVNLGQRLSPEFIRLVDWPAASLPPGAISDEHAIDGRVTRTSLSPGEPVLE 102
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTIST 112
S L G I + +T+
Sbjct: 103 SKLTPV-GTKGGLSAVIADGKRAITVRV 129
>gi|284029612|ref|YP_003379543.1| SAF domain-containing protein [Kribbella flavida DSM 17836]
gi|283808905|gb|ADB30744.1| SAF domain protein [Kribbella flavida DSM 17836]
Length = 219
Score = 40.7 bits (94), Expect = 0.059, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN--IRGNYAHSIKDVV 68
+ + A + AG L L ++V ++ G Y + D+
Sbjct: 40 TALAGARLLASADDTTTIWAAERDLPAGTKLTSDDLTTVRVRFTSSEAAGQYVAADADLK 99
Query: 69 GLVTRRVLLPDHVIPLS 85
GLV R + +P
Sbjct: 100 GLVMSRAVKAGEFVPRR 116
>gi|227504186|ref|ZP_03934235.1| SAF domain protein [Corynebacterium striatum ATCC 6940]
gi|227199230|gb|EEI79278.1| SAF domain protein [Corynebacterium striatum ATCC 6940]
Length = 226
Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 53/152 (34%), Gaps = 8/152 (5%)
Query: 4 VRFLLFFSLYVLSLDSLFASV--IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
VR +L L + + S + + AVV + + AG L L V + + +
Sbjct: 21 VRRVLAAVLIIGAGLSALHARRELPQAVVFARDVPAGSTLQAEDLTLAPVPSHILPDSAV 80
Query: 62 -HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVIS---RGAKVRIILTQGNMT--ISTAGI 115
++ + G V ++ + L P ++ + + + +M
Sbjct: 81 DTDLEKLEGRVVVAAAASGELVTDARLLSPELVDNLVNNSTLNTSGEESHMIPLKLAEPD 140
Query: 116 ALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
L GD + V ++ + G+ G+V
Sbjct: 141 ILPHLHHGDTVNVIAGNSNSDLIGTTSPAGSV 172
>gi|329847252|ref|ZP_08262280.1| flp pilus assembly protein CpaB [Asticcacaulis biprosthecum C19]
gi|328842315|gb|EGF91884.1| flp pilus assembly protein CpaB [Asticcacaulis biprosthecum C19]
Length = 311
Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 18/48 (37%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
A ++ + + AG ++E+ L + +++ Y G
Sbjct: 44 AVATARVLIAARELKAGTRISEADLTWQEWPVASLNAAYIVDGGMPAG 91
>gi|86748908|ref|YP_485404.1| Flp pilus assembly CpaB [Rhodopseudomonas palustris HaA2]
gi|86571936|gb|ABD06493.1| Flp pilus assembly CpaB [Rhodopseudomonas palustris HaA2]
Length = 265
Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 34/123 (27%), Gaps = 15/123 (12%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK------DVVGL 70
+ +V I G+ + S ++ + N+ + + G
Sbjct: 35 TAPVAQLATVEVLVAKSDIPLGQPVGPSDVQWQTWPAATASSNFILRSERPDASVQLAGS 94
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG-----DV 125
+ R + I L + G+ + M + I+ + G D
Sbjct: 95 IARSPFIAGEPIREQKLVKS----NGSGFMAAILPTGMRAISTEISPETGAGGFILPNDR 150
Query: 126 IAV 128
+ V
Sbjct: 151 VDV 153
>gi|83717368|ref|YP_440455.1| pilus assembly protein [Burkholderia thailandensis E264]
gi|167617228|ref|ZP_02385859.1| pilus assembly protein [Burkholderia thailandensis Bt4]
gi|257141103|ref|ZP_05589365.1| pilus assembly protein [Burkholderia thailandensis E264]
gi|83651193|gb|ABC35257.1| pilus assembly protein [Burkholderia thailandensis E264]
Length = 279
Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +S + V + +N GE L ++L+ + +++ +K + G V R L
Sbjct: 28 LVQTSSSAVTPVAVAATDVNLGEPLGPNQLRIVNWPTASVPPGAFTDLKSLEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIST 112
+ + L G I +T+
Sbjct: 88 ARGEPVLGTKLAPV-GTKGGLSAVIAPGDRAITVRV 122
>gi|167579113|ref|ZP_02371987.1| pilus assembly protein [Burkholderia thailandensis TXDOH]
Length = 279
Score = 40.7 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +S + V + +N GE L ++L+ + +++ +K + G V R L
Sbjct: 28 LVQTSSSAVTPVAVAATDVNLGEPLGPNQLRIVNWPTASVPPGAFTDLKSLEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIST 112
+ + L G I +T+
Sbjct: 88 ARGEPVLGTKLAPV-GTKGGLSAVIAPGDRAITVRV 122
>gi|326388865|ref|ZP_08210447.1| Flp pilus assembly CpaB [Novosphingobium nitrogenifigens DSM 19370]
gi|326206465|gb|EGD57300.1| Flp pilus assembly CpaB [Novosphingobium nitrogenifigens DSM 19370]
Length = 347
Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 15/135 (11%), Positives = 39/135 (28%), Gaps = 20/135 (14%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIG----------HAVVPSVVINAGEVLNESRLKEMQVTN 53
+ F + SL +L + ++ +V + G ++ +
Sbjct: 13 LIFAIATSLAARALLTGGSTPQAIAAAKVLDGPKVLVAQRALPVGTIITADAVSYQAWPK 72
Query: 54 SNIRGNYA----HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK-VRIILTQGNM 108
++ Y ++ ++G V R + I +++ G + M
Sbjct: 73 DLVQDAYFLQDKTDMQKLLGTVVRNPITAGQPITT-----GSLVAPGDRGFLAAALGPGM 127
Query: 109 TISTAGIALSDASIG 123
T ++ G
Sbjct: 128 RAVTIPVSTRTGVAG 142
>gi|256397696|ref|YP_003119260.1| SAF domain-containing protein [Catenulispora acidiphila DSM 44928]
gi|256363922|gb|ACU77419.1| SAF domain protein [Catenulispora acidiphila DSM 44928]
Length = 197
Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ V ++ ++ + ++ + S + + I AG+V+ + +K ++V ++ G
Sbjct: 7 VTSVALVVTGAV-LFTVAAWQISGRAPVLAVAQPIAAGQVVTQDDVKIVKVGAASDLGLV 65
Query: 61 AH-SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN 107
+ +VVG V L ++ ++ G V + +
Sbjct: 66 PSINEAEVVGHVAAVPLAAGTLLTAHMVGTADFPPPGQAVIGVALKAG 113
>gi|167725246|ref|ZP_02408482.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
DM98]
Length = 245
Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 29/73 (39%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +S + V + ++ GE L ++L+ + +++ +K + G V R L
Sbjct: 28 LVQTSSSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHR 89
+ + L
Sbjct: 88 ARGEPVLGTKLAP 100
>gi|330963439|gb|EGH63699.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 357
Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 38/116 (32%), Gaps = 8/116 (6%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ + ++ + VV + I A + L ++ + I+ +VG + R
Sbjct: 91 PATPPVEEALRHNVVVLARDIPAYTPITAEDLVIERLKVA--PPGSFERIEILVGRSSWR 148
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
L S ++R I + + + + + + GD + V
Sbjct: 149 TLTAGTWPSESSFDAGGTLAR----MIRPHERALALQVDEVTGASGQLSPGDYVDV 200
>gi|167851181|ref|ZP_02476689.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
B7210]
Length = 253
Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 29/73 (39%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +S + V + ++ GE L ++L+ + +++ +K + G V R L
Sbjct: 28 LVQTSSSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHR 89
+ + L
Sbjct: 88 ARGEPVLGTKLAP 100
>gi|167821373|ref|ZP_02453053.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei 91]
Length = 251
Score = 40.7 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 29/73 (39%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +S + V + ++ GE L ++L+ + +++ +K + G V R L
Sbjct: 28 LVQTSSSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHR 89
+ + L
Sbjct: 88 ARGEPVLGTKLAP 100
>gi|146296447|ref|YP_001180218.1| hypothetical protein Csac_1426 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410023|gb|ABP67027.1| hypothetical protein Csac_1426 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 194
Score = 40.7 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASV---IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
++ + ++ V L +F S + V I+ GE++++S + +++ + +
Sbjct: 4 RVIKLAVIPAVLVALLSYIFISRQTNMIQIPVAKNFIHQGEIIDDSDITFLKLPSYALPQ 63
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI 101
+ +VG + V+ YV + I
Sbjct: 64 GVIKEKEKLVGKRAGVTRVAGDFFYDDVIKTVYVQVYEDETLI 106
>gi|239917956|ref|YP_002957514.1| SAF domain-containing protein [Micrococcus luteus NCTC 2665]
gi|239839163|gb|ACS30960.1| SAF domain-containing protein [Micrococcus luteus NCTC 2665]
Length = 215
Score = 40.3 bits (93), Expect = 0.078, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVG 69
S+ + + + + G + L+ ++V S Y G
Sbjct: 34 SIAGVVALVASSQRTAAYWTAAEDLPPGTPIAAGDLRPVEVNLSEAGERYLSADAPAPEG 93
Query: 70 LVTRRVLLPDHVIPLSVL 87
+ + ++P + L
Sbjct: 94 RMVSGTVRAGELLPAAAL 111
>gi|289705098|ref|ZP_06501502.1| SAF domain protein [Micrococcus luteus SK58]
gi|289558126|gb|EFD51413.1| SAF domain protein [Micrococcus luteus SK58]
Length = 215
Score = 40.3 bits (93), Expect = 0.080, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVG 69
S+ + + + + G + L+ ++V S Y G
Sbjct: 34 SIAGVVALVASSQRTAAYWTAAEDLPPGTPIAAGDLRPVEVNLSEAGERYLSADAPAPEG 93
Query: 70 LVTRRVLLPDHVIPLSVL 87
+ + ++P + L
Sbjct: 94 RMVSGTVRAGELLPAAAL 111
>gi|330873640|gb|EGH07789.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 319
Score = 40.3 bits (93), Expect = 0.080, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 38/116 (32%), Gaps = 8/116 (6%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ + ++ + VV + I A + L ++ + I+ +VG + R
Sbjct: 53 PATPPVEEALRHNVVVLARDIPAYTPITAEDLIIERLKVA--PPGSFERIESLVGRSSWR 110
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
L S ++R I + + + + + + GD + V
Sbjct: 111 TLTAGTWPSESSFDAGGTLAR----MIRPHERALALQVDEVTGASGQLSPGDYVDV 162
>gi|91788410|ref|YP_549362.1| Flp pilus assembly CpaB [Polaromonas sp. JS666]
gi|91697635|gb|ABE44464.1| Flp pilus assembly CpaB [Polaromonas sp. JS666]
Length = 284
Score = 40.3 bits (93), Expect = 0.080, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 3/108 (2%)
Query: 7 LLFFSLYVLSL-DSLFASV-IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
L F ++ V + S AS V +V I+ G L+ ++ + S +
Sbjct: 16 LAFGAVIVAARWISAQASADTSKVAVAAVDISLGARLSPEMVRMVDWPASAMPPGAITDA 75
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIST 112
K + VTR + + L G + + MT+
Sbjct: 76 KQLETRVTRTSIQRGEPVMEGKLAP-PGTQGGLSAVVAEGKRAMTVRV 122
>gi|187478777|ref|YP_786801.1| pilus assembly protein [Bordetella avium 197N]
gi|115423363|emb|CAJ49897.1| putative pilus assembly protein [Bordetella avium 197N]
Length = 270
Score = 40.3 bits (93), Expect = 0.081, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD--VVGLVTRRVLLPDHV 81
V+ +V + AG++L E + ++ + + ++G + ++
Sbjct: 59 VMVTRLVAWADLEAGQLLTEDDIASREIPKNWAPHQSLSPEQTGLLIGSRLKVPVMAGQP 118
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIA--LSDASIGDVIAV 128
I + + +S G R+ + + +T+ +A D GD + +
Sbjct: 119 ILQADIE---FVSPGTAARLGVGKRALTLPVRELADMPPDMREGDRLDI 164
>gi|167584956|ref|ZP_02377344.1| Flp pilus assembly CpaB [Burkholderia ubonensis Bu]
Length = 280
Score = 40.3 bits (93), Expect = 0.082, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 1/109 (0%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
V L + L S + V + +N GE + ++++ + ++
Sbjct: 15 VAGLAAVAFASRWLVQTSTSAVTQVAVATTDLNLGEPIGPAQIRTISWPTGSVPPGAFTD 74
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIST 112
K + G V R L + + L G I +T+
Sbjct: 75 TKSLEGRVVRTSLARGEPVLEAKLAPL-GTKGGLSAVIGAGNRAITVRV 122
>gi|148976663|ref|ZP_01813350.1| Flp pilus assembly protein CpaB [Vibrionales bacterium SWAT-3]
gi|145964014|gb|EDK29272.1| Flp pilus assembly protein CpaB [Vibrionales bacterium SWAT-3]
Length = 249
Score = 40.3 bits (93), Expect = 0.084, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 24/70 (34%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V + VV S I AG V+ E L + I N ++++G V
Sbjct: 32 VQPTIEVEKVERHPVVVASQEIEAGTVIEEQFLTTKLMEVDWINENNYSDKEELIGKVVA 91
Query: 74 RVLLPDHVIP 83
+ V+
Sbjct: 92 NTIYAGEVLH 101
>gi|66047617|ref|YP_237458.1| Flp pilus assembly CpaB [Pseudomonas syringae pv. syringae B728a]
gi|63258324|gb|AAY39420.1| Flp pilus assembly CpaB [Pseudomonas syringae pv. syringae B728a]
gi|330969408|gb|EGH69474.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 319
Score = 40.3 bits (93), Expect = 0.084, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 19/144 (13%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + I A + L ++ + +I +VG + R
Sbjct: 53 PPTPPVEDALRHNVVVLARDIPAYTAITADDLTIERLKVA--PPGSFEAIDKIVGRSSWR 110
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK--- 129
L + S ++R I + + + + + + GD + V
Sbjct: 111 TLTAGSWLTESSFDTGGTLAR----MIRPHERALALQVDEVTGASGQLSPGDYVDVLLYL 166
Query: 130 -------NIDTGVMVSG-SVVDTG 145
N + V+V ++ G
Sbjct: 167 PEDVSNPNRSSQVVVPALRILGVG 190
>gi|28871965|ref|NP_794584.1| hypothetical protein PSPTO_4850 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855218|gb|AAO58279.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 357
Score = 40.3 bits (93), Expect = 0.088, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 36/116 (31%), Gaps = 8/116 (6%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + I A + L ++ + I +VG + R
Sbjct: 91 PVTPPVEEALRHNVVVLARDIPAYTPITAEDLAIERLKIA--PPGSFERIDSLVGRSSWR 148
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
L S ++R I + + + + + + GD + V
Sbjct: 149 TLTAGTWPSESSFDAGGTLAR----MIRPYERALALQVDEVTGASGQLSPGDYVDV 200
>gi|17545375|ref|NP_518777.1| pilus assembly transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|17427667|emb|CAD14186.1| probable pilus assembly cpab transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 288
Score = 40.3 bits (93), Expect = 0.088, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 1/88 (1%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
V +V +N G+ L+ ++ + +++ + G VTR L P +
Sbjct: 36 TTKVAVAAVDVNLGQRLSPEFIRLVDWPAASLPPGAISDEHAIDGRVTRTSLSPGEPVLE 95
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTIST 112
S L G I + +T+
Sbjct: 96 SKLTPV-GTKGGLSAVIADGKRAITVRV 122
>gi|289642191|ref|ZP_06474342.1| SAF domain protein [Frankia symbiont of Datisca glomerata]
gi|289508037|gb|EFD28985.1| SAF domain protein [Frankia symbiont of Datisca glomerata]
Length = 275
Score = 40.3 bits (93), Expect = 0.089, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 2/116 (1%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
V + VV + + G + + ++ + + + S +D VG
Sbjct: 40 AVAAARPARPPSPTPVVVAAADLAGGATMAATDVRMVSLPTDVVPVGAVRSPQDAVGRTL 99
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
+ I + + P +I+R ++ + I+ AG L +GD + V
Sbjct: 100 TAAVRQGEPITDARVLGPGLITRRQAAAGLVAAP-VRITDAGSVLF-LRVGDHVNV 153
>gi|78186672|ref|YP_374715.1| pilus assembly protein CpaB [Chlorobium luteolum DSM 273]
gi|78166574|gb|ABB23672.1| pilus assembly protein CpaB [Chlorobium luteolum DSM 273]
Length = 266
Score = 40.3 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Query: 6 FLLFFSLYVLSLDSLFASVIGH-AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI 64
F + + + + V G V+ + I+AG + E++LK +Q S + +
Sbjct: 16 MAAFITARWMGVVQSRSEVSGPTVVIAARAIDAGTAIAENQLKAVQWPRSTVPEGASART 75
Query: 65 KDVVGLVTRRVLLPDHVIPLSVLHR 89
DV G + R ++ + L
Sbjct: 76 DDVAGRIARVSMIAGEPVLPGKLAP 100
>gi|323525745|ref|YP_004227898.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1001]
gi|323382747|gb|ADX54838.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1001]
Length = 320
Score = 40.3 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ + + VV + V+ AG+ + L+ + + V G V
Sbjct: 31 APAPVAPVRQTVFPVVVATRVLPAGKPIAADALRVQPLPIN--PNGAFADPSLVAGRVPA 88
Query: 74 RVLLPDHVIPLSVL 87
+ + + L
Sbjct: 89 ADIGAEAPVLEEQL 102
>gi|209515950|ref|ZP_03264811.1| Flp pilus assembly protein CpaB [Burkholderia sp. H160]
gi|209503608|gb|EEA03603.1| Flp pilus assembly protein CpaB [Burkholderia sp. H160]
Length = 375
Score = 40.3 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 44/142 (30%), Gaps = 18/142 (12%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFA--SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
+ V ++F +L+V + A + V + + G +L ES L +V + +
Sbjct: 13 LASVGAIIFRALFVAASQPGQARPPAMDRVRVAAADLPEGMLLRESDLAWKEVPHKQVLQ 72
Query: 59 NYA-------HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111
D+ G V R + ++ + + P + M
Sbjct: 73 GALVKGDAESAEATDLKGDVLRHAVTAGTMLGTADVIPPNAPG----FLAAALKPGMRAI 128
Query: 112 TAGIALSDA-----SIGDVIAV 128
+ I GD + V
Sbjct: 129 SVAIDDVSGNAGLIQPGDYVDV 150
>gi|331014709|gb|EGH94765.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 357
Score = 40.3 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 36/116 (31%), Gaps = 8/116 (6%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + I A + L ++ + I +VG + R
Sbjct: 91 PVTPPVEEALRHNVVVLARDIPAYTPITAEDLAIERLKIA--PPGSFERIDSLVGRSSWR 148
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
L S ++R I + + + + + + GD + V
Sbjct: 149 TLTAGTWPSESSFDAGGTLAR----MIRPYERALALQVDEVTGASGQLSPGDYVDV 200
>gi|302530357|ref|ZP_07282699.1| predicted protein [Streptomyces sp. AA4]
gi|302439252|gb|EFL11068.1| predicted protein [Streptomyces sp. AA4]
Length = 216
Score = 40.3 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 4/100 (4%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
VV + + AG VL + ++ + + +S +I VG + I L
Sbjct: 53 VVSARDLPAGSVLRAADVRTVALPDSLRPSGALSAIDAAVGRLLSGAARAGEPITDVRLL 112
Query: 89 RPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
+ G + + + ++ A +A G + V
Sbjct: 113 GNNLPVTGEPDAVTV---AVRLADAAVA-ELLQPGQRVDV 148
>gi|225174960|ref|ZP_03728957.1| Flp pilus assembly protein CpaB [Dethiobacter alkaliphilus AHT 1]
gi|225169600|gb|EEG78397.1| Flp pilus assembly protein CpaB [Dethiobacter alkaliphilus AHT 1]
Length = 238
Score = 40.3 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 17/111 (15%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ VV S I A + L + + N + S+ D G + ++
Sbjct: 41 NVVVASSTIPAHTRITAEMLDVVSIPNDAVHPEALRSVDDAAG-----GISRTEIVRGEQ 95
Query: 87 LHRPYVISRGAKVRIILTQG----NMTI---STAGIALSDASI--GDVIAV 128
+ V++ + + ++I G+A I GD I V
Sbjct: 96 VIDARVVTEDRRATLSYRVPEGMRAISIPVGEVTGVA---GYISAGDNIDV 143
>gi|302335340|ref|YP_003800547.1| SAF domain protein [Olsenella uli DSM 7084]
gi|301319180|gb|ADK67667.1| SAF domain protein [Olsenella uli DSM 7084]
Length = 229
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 32/97 (32%), Gaps = 3/97 (3%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + + VV + G+V++++ + E + S+ DVVG +
Sbjct: 40 IARYGGEVVRLVVSRGPLEPGDVVDQADVSERDWVTDLAPSDALTSLDDVVGREVTVPVA 99
Query: 78 PDHVIPL---SVLHRPYVISRGAKVRIILTQGNMTIS 111
+ + + I G I + +S
Sbjct: 100 ANAPVTALAFRDVAAMADIPAGHVALSIPITDKLGVS 136
>gi|167908128|ref|ZP_02495333.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
NCTC 13177]
Length = 256
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 29/73 (39%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +S + V + ++ GE L ++L+ + +++ +K + G V R L
Sbjct: 28 LVQTSSSAVTPVAVAATDVSLGEPLGPNQLRIVNWPTASVPPGAFTDLKPLEGRVARTSL 87
Query: 77 LPDHVIPLSVLHR 89
+ + L
Sbjct: 88 ARGEPVLGTKLAP 100
>gi|323700358|ref|ZP_08112270.1| Flp pilus assembly protein CpaB [Desulfovibrio sp. ND132]
gi|323460290|gb|EGB16155.1| Flp pilus assembly protein CpaB [Desulfovibrio desulfuricans ND132]
Length = 273
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 25/81 (30%)
Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
+ G L E L+ + T + +K V G V + + + L
Sbjct: 50 AKTDLGRGVKLTEDMLEIRKFTQDSRPSGAFAEVKQVEGRVLNQTVGMGDALTPLKLADK 109
Query: 91 YVISRGAKVRIILTQGNMTIS 111
++ G I + M +
Sbjct: 110 SIMGGGVSALITPGKRAMAVK 130
>gi|289424445|ref|ZP_06426228.1| SAF domain protein [Propionibacterium acnes SK187]
gi|289155142|gb|EFD03824.1| SAF domain protein [Propionibacterium acnes SK187]
Length = 205
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 30 ATSSSGREVIVAAHAIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASIRITEG 88
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 89 TILTSSAVLSGSAVGSGKALVGIHLADSSMVGML-------QVGQRVSVVSPS 134
>gi|328908302|gb|EGG28061.1| SAF domain protein [Propionibacterium sp. P08]
Length = 219
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S VV + I G V+ S L+ +++ + A + V G +
Sbjct: 55 ATSSSGREVVVAARAIEGGRVIQRSDLRTIRIDPGILPHEAAA-LAQVEGRQASVRITEG 113
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + G + I + + +G ++V +
Sbjct: 114 TILTTSAVLSGSATGSGKALVGIHLADSSMVGML-------QVGQQVSVVSPS 159
>gi|296140955|ref|YP_003648198.1| SAF domain protein [Tsukamurella paurometabola DSM 20162]
gi|296029089|gb|ADG79859.1| SAF domain protein [Tsukamurella paurometabola DSM 20162]
Length = 218
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 14/129 (10%)
Query: 3 CVRFLLFFSLYVLSLDSLFASV----IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
R L VL+L S + + + G L ++ L+ V
Sbjct: 25 TARRAAAGVLTVLALVVAVTSEPSGPQTEVLTAARELGPGGRLADADLRLTTVPAELAPP 84
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
+ S VG + ++ + + + G+ +AL
Sbjct: 85 DALTSTGQAVGRSVTGPVGAGEILTDRRVLTDRTAGQ-------IRPGS---RLVPVALQ 134
Query: 119 DASIGDVIA 127
DA+ D++
Sbjct: 135 DAATMDLLR 143
>gi|227832659|ref|YP_002834366.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
gi|262182856|ref|ZP_06042277.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
gi|227453675|gb|ACP32428.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
Length = 214
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 14/114 (12%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-HSIKDVVGLVTRRVLLPDHVIP-- 83
VV + + AGE L S + +V +S + + D VG V ++
Sbjct: 43 RVVVMARDVAAGETLALSDVSVARVPSSALPATALGSNPDDAVGRVLVAAASTGEILTST 102
Query: 84 ---LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTG 134
S L + + G + + L + + + GD + + + D G
Sbjct: 103 RLLSSDLIADFGMEDGHLIPLTLAEPEIA--------RNLHHGDTVNIVSTDDG 148
>gi|85705149|ref|ZP_01036249.1| CpaB family protein [Roseovarius sp. 217]
gi|85670471|gb|EAQ25332.1| CpaB family protein [Roseovarius sp. 217]
Length = 289
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 12/116 (10%), Positives = 32/116 (27%), Gaps = 7/116 (6%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
V + +I GE L ++ + ++ S +++ V +
Sbjct: 47 TVDIYVANQLIKYGEPLTTEAVRLIAFPKDSLPEGAFSSTEELFPSGASVVRKALRRMEK 106
Query: 85 SVLHRPYVISR-GAKVRIILT----QGNMTISTAGIALSDA--SIGDVIAVKNIDT 133
+ +++ G + I I + GD + + +
Sbjct: 107 NEPILAVKVTKPGEEAGITSQLERGMRAFAIKVDVTSGVSGFLRPGDTVDIYWTGS 162
>gi|255020087|ref|ZP_05292158.1| Flp pilus assembly protein CpaB [Acidithiobacillus caldus ATCC
51756]
gi|254970449|gb|EET27940.1| Flp pilus assembly protein CpaB [Acidithiobacillus caldus ATCC
51756]
Length = 419
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 10/109 (9%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPDHVI 82
AVVP I G +L+ S + + + + G LL I
Sbjct: 65 TIKAVVPVQDIAPGTILDLSMVAARSIPADTAPSDVITPETFDQYAGHRVNVPLLQGRPI 124
Query: 83 PLSVLHRPYVISRGAKVRII-LTQGNMTISTAGIALSDA--SIGDVIAV 128
S Y+ R I+ + MT + ++ D GD + V
Sbjct: 125 LAS-----YLSGRRTLADIVDPDKLAMTFTVDNVSTLDGLLQPGDHVDV 168
>gi|115376401|ref|ZP_01463638.1| Flp pilus assembly CpaB, putative [Stigmatella aurantiaca DW4/3-1]
gi|310822673|ref|YP_003955031.1| Flp pilus assembly protein CpaB [Stigmatella aurantiaca DW4/3-1]
gi|115366608|gb|EAU65606.1| Flp pilus assembly CpaB, putative [Stigmatella aurantiaca DW4/3-1]
gi|309395745|gb|ADO73204.1| Flp pilus assembly protein CpaB [Stigmatella aurantiaca DW4/3-1]
Length = 270
Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 31/105 (29%), Gaps = 7/105 (6%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLVTRRVLLPDHVI 82
+ VV + I G V++ + + V + + S VV L +
Sbjct: 39 LVPVVVAAQDIPEGSVISFEMISQRSVPEQFVTSSVVKPDSANYVVNQKVLVPLQAGDPL 98
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
S R + + + ++ + + +G I
Sbjct: 99 LWSQFETTKAAER---LSTKVQKKGRAVTIEAKSTTS--VGGWIR 138
>gi|314969437|gb|EFT13535.1| SAF domain protein [Propionibacterium acnes HL037PA1]
Length = 166
Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 2 ATSSSGREVIVAAHAIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASIRITEG 60
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 61 TILTSSAVLSGSAVGSGKALVGIHLADSSMVGML-------QVGQRVSVVSPS 106
>gi|242003723|ref|XP_002422836.1| Sialic acid synthase, putative [Pediculus humanus corporis]
gi|212505706|gb|EEB10098.1| Sialic acid synthase, putative [Pediculus humanus corporis]
Length = 376
Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+G VV + + G+V+ + I GNY H+ ++G + + D I
Sbjct: 314 EKLGKTVVAAKPLKKGDVITWDNVSLKVAEPKGIPGNYLHN---IIGKTINKTVDEDESI 370
Query: 83 PLSVL 87
+
Sbjct: 371 LENFF 375
>gi|170696787|ref|ZP_02887896.1| Flp pilus assembly protein CpaB [Burkholderia graminis C4D1M]
gi|170138303|gb|EDT06522.1| Flp pilus assembly protein CpaB [Burkholderia graminis C4D1M]
Length = 318
Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ + + VV + V+ AG+ + L+ + + V G V
Sbjct: 36 APAPVASVKQTVFPVVVATRVLPAGKPIGADALRVQPLPIN--PNGAFADPSLVAGRVPA 93
Query: 74 RVLLPDHVIPLSVL 87
+ D + L
Sbjct: 94 ADIGADSPVLEEQL 107
>gi|260768626|ref|ZP_05877560.1| putative pilus assembly protein [Vibrio furnissii CIP 102972]
gi|260616656|gb|EEX41841.1| putative pilus assembly protein [Vibrio furnissii CIP 102972]
Length = 312
Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 20/150 (13%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGH-----AVVPSVVINAGEVLNESRLKEMQVTNSNIRG 58
V FL+ L A+V A V + G ++ + +
Sbjct: 23 VVFLVSGMLTANPSPPKNAAVSKPIEQYDAWVVVDDLTQGTLITRDM--MKPTRVTQLGD 80
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
+ + +G ++ ++ + +L + + + I G L+
Sbjct: 81 SLIQNPDVALGRRVKQDVIAGAYLTSKMLVPNRPVIDD----LPENYRAIAIRA-GEVLT 135
Query: 119 DA---SIGDVIAVK-----NIDTGVMVSGS 140
GD + V N ++G + S
Sbjct: 136 VGGYLQPGDHVDVMLLLKPNKESGAITSAR 165
>gi|314922116|gb|EFS85947.1| SAF domain protein [Propionibacterium acnes HL001PA1]
gi|314965200|gb|EFT09299.1| SAF domain protein [Propionibacterium acnes HL082PA2]
gi|314982336|gb|EFT26429.1| SAF domain protein [Propionibacterium acnes HL110PA3]
gi|315092623|gb|EFT64599.1| SAF domain protein [Propionibacterium acnes HL110PA4]
gi|315093960|gb|EFT65936.1| SAF domain protein [Propionibacterium acnes HL060PA1]
gi|315104610|gb|EFT76586.1| SAF domain protein [Propionibacterium acnes HL050PA2]
gi|327329490|gb|EGE71250.1| SAF domain protein [Propionibacterium acnes HL103PA1]
Length = 191
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 27 ATSSSGREVIVAAHTIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASVRISEG 85
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 86 TILTSSAVLSGSSVGSGKALVGIHLADSSMVGML-------QVGQQVSVVSPS 131
>gi|289428376|ref|ZP_06430062.1| SAF domain protein [Propionibacterium acnes J165]
gi|289158348|gb|EFD06565.1| SAF domain protein [Propionibacterium acnes J165]
Length = 194
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 30 AASSSGREVIVAAHAIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASIRITEG 88
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 89 TILTSSAVLSGSAVGSGKALVGIHLADSSMVGML-------QVGQRVSVVSPS 134
>gi|84387246|ref|ZP_00990267.1| Flp pilus assembly protein CpaB [Vibrio splendidus 12B01]
gi|84377893|gb|EAP94755.1| Flp pilus assembly protein CpaB [Vibrio splendidus 12B01]
Length = 249
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 23/70 (32%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V + VV S I AG ++ + L + I N D++G V
Sbjct: 32 VQPTVEVETVERRPVVVASQEIEAGTIIEDQFLTTRLMEVDWINENNYSDKADLIGKVVA 91
Query: 74 RVLLPDHVIP 83
+ V+
Sbjct: 92 NTIYAGEVLH 101
>gi|313806640|gb|EFS45147.1| SAF domain protein [Propionibacterium acnes HL087PA2]
gi|313826714|gb|EFS64428.1| SAF domain protein [Propionibacterium acnes HL063PA1]
gi|327333556|gb|EGE75276.1| SAF domain protein [Propionibacterium acnes HL096PA3]
gi|327445418|gb|EGE92072.1| SAF domain protein [Propionibacterium acnes HL013PA2]
Length = 166
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 2 AASSSGREVIVAAHAIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASIRITEG 60
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 61 TILTSSAVLSGSAVGSGKALVGIHLADSSMVGML-------QVGQRVSVVSPS 106
>gi|282853565|ref|ZP_06262902.1| SAF domain protein [Propionibacterium acnes J139]
gi|282583018|gb|EFB88398.1| SAF domain protein [Propionibacterium acnes J139]
Length = 194
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 30 ATSSSGREVIVAAHTIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASVRISEG 88
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 89 TILTSSAVLSGSSVGSGKALVGIHLADSSMVGML-------QVGQQVSVVSPS 134
>gi|83589197|ref|YP_429206.1| hypothetical protein Moth_0329 [Moorella thermoacetica ATCC 39073]
gi|83572111|gb|ABC18663.1| hypothetical protein Moth_0329 [Moorella thermoacetica ATCC 39073]
Length = 212
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 4/93 (4%)
Query: 3 CVRFLLFFSLYVLSLDSL---FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
+ L F+ +L+ + A+ V I AGE + + ++V ++
Sbjct: 10 SLILALIFTAAILAAGNGKYRQATKTVEVVKAVRFIPAGERITADSITTVRVP-ESMASG 68
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV 92
A + KD+ G + LL D +
Sbjct: 69 LATNPKDLEGKEAKVSLLKDQFVWKDAAGELAA 101
>gi|319795778|ref|YP_004157418.1| flp pilus assembly protein cpab [Variovorax paradoxus EPS]
gi|315598241|gb|ADU39307.1| Flp pilus assembly protein CpaB [Variovorax paradoxus EPS]
Length = 327
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ +V VV + + AG+++ L+ ++T + G V
Sbjct: 42 TASAKTQQAVTYPVVVAAKALPAGQIIPADALRVERLTIN--PSGAFQDTAVATGRVPVL 99
Query: 75 VLLPDHVIPLSVL 87
L + L
Sbjct: 100 DLGEGTPLLEGQL 112
>gi|328954938|ref|YP_004372271.1| Flp pilus assembly protein CpaB [Coriobacterium glomerans PW2]
gi|328455262|gb|AEB06456.1| Flp pilus assembly protein CpaB [Coriobacterium glomerans PW2]
Length = 223
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 46/134 (34%), Gaps = 16/134 (11%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + + V + I GE L+E+ ++ + S + A S++DV G +
Sbjct: 40 LARYGGDLVSVCVATRTIEPGETLDETNVQVKEWVASLLPQGAATSLRDVAGTRVTSRVP 99
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI-----STAGIALSDASIGDVIAVKNID 132
V+ G + + + +++ G A+ GD + V
Sbjct: 100 SHAVLCPVYTETS-----GETLDVPSGKVAVSVPVDDQHALGGAVES---GDTVDVYVSK 151
Query: 133 ---TGVMVSGSVVD 143
+ + ++D
Sbjct: 152 DGLSDRLCEARIID 165
>gi|327455631|gb|EGF02286.1| SAF domain protein [Propionibacterium acnes HL083PA2]
Length = 166
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 2 ATSSSGREVIVAAHAIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASIRITEG 60
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 61 TILTSSAVLSGSAVGSGKALVGIHLADSSMVGML-------QVGQRVSVVSPS 106
>gi|300692330|ref|YP_003753325.1| pilus assembly (cpaB), transmembrane protein [Ralstonia
solanacearum PSI07]
gi|299079390|emb|CBJ52061.1| Putative pilus assembly (cpaB), transmembrane protein [Ralstonia
solanacearum PSI07]
Length = 284
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 24/68 (35%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
AS I V S + G+ L+ +K + +++ + G V + L
Sbjct: 33 ASGITKVAVASADVELGQRLSPEMVKLVDWPAASLPPGVVTDAHALDGRVVKASLTRGEP 92
Query: 82 IPLSVLHR 89
+ S L
Sbjct: 93 VLESKLTP 100
>gi|332674895|gb|AEE71711.1| hypothetical protein PAZ_c05150 [Propionibacterium acnes 266]
Length = 194
Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + + A + V G +
Sbjct: 30 AASSSGREVIVAAHAIEGGRVIQRSDLHTVRIDHGVLPHETAT-LAQVEGRQASIRITEG 88
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 89 TILTSSAVLSGSAVGSGKALVGIHLADSSMVGML-------QVGQRVSVVSPS 134
>gi|313835437|gb|EFS73151.1| SAF domain protein [Propionibacterium acnes HL037PA2]
gi|314928544|gb|EFS92375.1| SAF domain protein [Propionibacterium acnes HL044PA1]
gi|314970476|gb|EFT14574.1| SAF domain protein [Propionibacterium acnes HL037PA3]
Length = 191
Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S VV + I G V+ S L+ +++ + A + V G +
Sbjct: 27 ATSSSGREVVVAARAIEGGRVIQRSDLRTIRIDPGILPHEAAA-LAQVEGRQASVRITEG 85
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + G + I + + +G ++V +
Sbjct: 86 TILTTSAVLSGSATGSGKALVGIHLADSSMVGML-------QVGQQVSVVSPS 131
>gi|295130055|ref|YP_003580718.1| SAF domain protein [Propionibacterium acnes SK137]
gi|291376350|gb|ADE00205.1| SAF domain protein [Propionibacterium acnes SK137]
Length = 194
Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 30 ATSSSGREVIVAAHAIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASIRITEG 88
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 89 TILTSSAVLSGSAVGSGKALVGIHLADSSMVGML-------QVGQRVSVVSPS 134
>gi|327454776|gb|EGF01431.1| SAF domain protein [Propionibacterium acnes HL087PA3]
gi|328755832|gb|EGF69448.1| SAF domain protein [Propionibacterium acnes HL087PA1]
Length = 166
Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 2 ATSSSGREVIVAAHAIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASIRITEG 60
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 61 TILTSSAVLSGSAVGSGKALVGIHLADSSMVGML-------QVGQRVSVVSPS 106
>gi|313765398|gb|EFS36762.1| SAF domain protein [Propionibacterium acnes HL013PA1]
gi|313772616|gb|EFS38582.1| SAF domain protein [Propionibacterium acnes HL074PA1]
gi|313810837|gb|EFS48551.1| SAF domain protein [Propionibacterium acnes HL083PA1]
gi|313814319|gb|EFS52033.1| SAF domain protein [Propionibacterium acnes HL025PA1]
gi|313815198|gb|EFS52912.1| SAF domain protein [Propionibacterium acnes HL059PA1]
gi|313817183|gb|EFS54897.1| SAF domain protein [Propionibacterium acnes HL046PA2]
gi|313821753|gb|EFS59467.1| SAF domain protein [Propionibacterium acnes HL036PA1]
gi|313824356|gb|EFS62070.1| SAF domain protein [Propionibacterium acnes HL036PA2]
gi|313828503|gb|EFS66217.1| SAF domain protein [Propionibacterium acnes HL063PA2]
gi|313831956|gb|EFS69670.1| SAF domain protein [Propionibacterium acnes HL007PA1]
gi|313834503|gb|EFS72217.1| SAF domain protein [Propionibacterium acnes HL056PA1]
gi|314915959|gb|EFS79790.1| SAF domain protein [Propionibacterium acnes HL005PA4]
gi|314916988|gb|EFS80819.1| SAF domain protein [Propionibacterium acnes HL050PA1]
gi|314921507|gb|EFS85338.1| SAF domain protein [Propionibacterium acnes HL050PA3]
gi|314926860|gb|EFS90691.1| SAF domain protein [Propionibacterium acnes HL036PA3]
gi|314931169|gb|EFS95000.1| SAF domain protein [Propionibacterium acnes HL067PA1]
gi|314954773|gb|EFS99179.1| SAF domain protein [Propionibacterium acnes HL027PA1]
gi|314958940|gb|EFT03042.1| SAF domain protein [Propionibacterium acnes HL002PA1]
gi|314961235|gb|EFT05336.1| SAF domain protein [Propionibacterium acnes HL002PA2]
gi|314974504|gb|EFT18599.1| SAF domain protein [Propionibacterium acnes HL053PA1]
gi|314977303|gb|EFT21398.1| SAF domain protein [Propionibacterium acnes HL045PA1]
gi|314985596|gb|EFT29688.1| SAF domain protein [Propionibacterium acnes HL005PA1]
gi|314987554|gb|EFT31645.1| SAF domain protein [Propionibacterium acnes HL005PA2]
gi|314988981|gb|EFT33072.1| SAF domain protein [Propionibacterium acnes HL005PA3]
gi|315081893|gb|EFT53869.1| SAF domain protein [Propionibacterium acnes HL078PA1]
gi|315082613|gb|EFT54589.1| SAF domain protein [Propionibacterium acnes HL027PA2]
gi|315086324|gb|EFT58300.1| SAF domain protein [Propionibacterium acnes HL002PA3]
gi|315097575|gb|EFT69551.1| SAF domain protein [Propionibacterium acnes HL038PA1]
gi|315099792|gb|EFT71768.1| SAF domain protein [Propionibacterium acnes HL059PA2]
gi|315101901|gb|EFT73877.1| SAF domain protein [Propionibacterium acnes HL046PA1]
gi|315110380|gb|EFT82356.1| SAF domain protein [Propionibacterium acnes HL030PA2]
gi|327331573|gb|EGE73312.1| SAF domain protein [Propionibacterium acnes HL096PA2]
gi|327335082|gb|EGE76793.1| SAF domain protein [Propionibacterium acnes HL097PA1]
gi|327447032|gb|EGE93686.1| SAF domain protein [Propionibacterium acnes HL043PA1]
gi|327449932|gb|EGE96586.1| SAF domain protein [Propionibacterium acnes HL043PA2]
gi|328756612|gb|EGF70228.1| SAF domain protein [Propionibacterium acnes HL025PA2]
gi|328758662|gb|EGF72278.1| SAF domain protein [Propionibacterium acnes HL020PA1]
gi|328761703|gb|EGF75218.1| SAF domain protein [Propionibacterium acnes HL099PA1]
Length = 166
Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 2 ATSSSGREVIVAAHAIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASIRITEG 60
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 61 TILTSSAVLSGSAVGSGKALVGIHLADSSMVGML-------QVGQRVSVVSPS 106
>gi|314980540|gb|EFT24634.1| SAF domain protein [Propionibacterium acnes HL072PA2]
gi|315087573|gb|EFT59549.1| SAF domain protein [Propionibacterium acnes HL072PA1]
Length = 166
Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 2 AASSSGREVIVAAHAIEGGRVIQRSDLHTVRIDPGILPHETAT-LAQVEGRQASIRITEG 60
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 61 TILTSSAVLSGSAVGSGKALVGIHLADSSMVGML-------QVGQRVSVVSPS 106
>gi|254478346|ref|ZP_05091725.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653]
gi|214035704|gb|EEB76399.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653]
Length = 181
Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
VV I AG V++E +K + V S +R YA S+ DVVG V + + I
Sbjct: 29 TEKVVVVEKDIPAGTVISEDAVKIIDVPASAVRPEYARSLTDVVGKVVKEGRVRGDFI 86
>gi|33867071|ref|NP_898629.1| hypothetical protein PBD2.014 [Rhodococcus erythropolis]
gi|33668905|gb|AAP73899.1| conserved hypothetical protein [Rhodococcus erythropolis]
Length = 235
Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 53/148 (35%), Gaps = 11/148 (7%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTN-SNIRGNYAH 62
+ ++ F + ++L + V + +V S I G+ + L QV + I
Sbjct: 51 IALVVVFVIGAVALVNGMRQVT-NVLVVSQDIAQGQQITSQDLTTKQVNAHAGIASVAIE 109
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
VVG V + V+ + + + ++G + +T+S A +
Sbjct: 110 DKATVVGQVAAVPIPSGTVLNPNAVTSAVIPTKGLTLV------GVTVSYAKLPAEPLRA 163
Query: 123 GDVIAVKNIDTGV---MVSGSVVDTGTV 147
GD++ + + V G + V
Sbjct: 164 GDMVRIVDTPRDQDDSPVQGPITSKAQV 191
>gi|229830045|ref|ZP_04456114.1| hypothetical protein GCWU000342_02151 [Shuttleworthia satelles DSM
14600]
gi|229791343|gb|EEP27457.1| hypothetical protein GCWU000342_02151 [Shuttleworthia satelles DSM
14600]
Length = 544
Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 36/120 (30%), Gaps = 6/120 (5%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG--NYAHSIKDVVGLVTRRVLL 77
+ + +V + GE +N S + Q+ + G + + +
Sbjct: 14 IHIHPRDNVLVALEDLKEGEQINLSEIDLSQMDQGQMAGKADAVSNPGQGNAYSNQPDTA 73
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG----IALSDASIGDVIAVKNIDT 133
D I L + RG KV + + G IA + G + N T
Sbjct: 74 RDVSIRAGSLTLLEDVKRGHKVALTDIPAGGRVIKYGNPIAIAKEEIRAGAWVHTHNART 133
>gi|119961944|ref|YP_948401.1| hypothetical protein AAur_2686 [Arthrobacter aurescens TC1]
gi|119948803|gb|ABM07714.1| conserved hypothetical protein [Arthrobacter aurescens TC1]
Length = 214
Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 28/100 (28%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
L+ S+ + A I G+V+ E+ L ++V ++ +Y
Sbjct: 27 LLVLASISGVIALVGTADRTTQVYTAREDIAVGQVVTEADLSIVKVRLDDVESSYVTVEN 86
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ 105
V + + + V I +
Sbjct: 87 GVAEGKVALQRVAKNQLVPQESLGVPDALNRKPVAIATEE 126
>gi|296271147|ref|YP_003653779.1| SAF domain-containing protein [Thermobispora bispora DSM 43833]
gi|296093934|gb|ADG89886.1| SAF domain protein [Thermobispora bispora DSM 43833]
Length = 212
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 36/116 (31%), Gaps = 7/116 (6%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V +L L + + + G L+ S + +++ + + G V
Sbjct: 25 VCALHRLAPPRGVPVLAAARDLPGG-RLSASDVTVVRLPPDALPDGVLRPGTPMAGRVVA 83
Query: 74 RVLLPDHVIP-LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
+ I + +L + ++G + + S GDV+ V
Sbjct: 84 GPMRRGEPITDVRLLGPGILRAQGQGLVATPVR-----IADARVAELLSPGDVVDV 134
>gi|83749639|ref|ZP_00946622.1| TRANSMEMBRANE PILUS ASSEMBLY PROTEIN; cpaB1 [Ralstonia solanacearum
UW551]
gi|207728107|ref|YP_002256501.1| pilus assembly protein cpab [Ralstonia solanacearum MolK2]
gi|207744157|ref|YP_002260549.1| pilus assembly protein cpab [Ralstonia solanacearum IPO1609]
gi|83723700|gb|EAP70895.1| TRANSMEMBRANE PILUS ASSEMBLY PROTEIN; cpaB1 [Ralstonia solanacearum
UW551]
gi|206591352|emb|CAQ56964.1| pilus assembly protein cpab [Ralstonia solanacearum MolK2]
gi|206595561|emb|CAQ62488.1| pilus assembly protein cpab [Ralstonia solanacearum IPO1609]
Length = 284
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 28/69 (40%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
+S I VV + I+ G+ L+ +K + ++++ + G V R L+
Sbjct: 33 SSGITKVVVAAADIDLGQRLSPDFIKTVDWPSASLPPGAISDTHALDGRVVRTSLIRGEP 92
Query: 82 IPLSVLHRP 90
+ S L
Sbjct: 93 VLESKLTPQ 101
>gi|83950065|ref|ZP_00958798.1| CpaB family protein [Roseovarius nubinhibens ISM]
gi|83837964|gb|EAP77260.1| CpaB family protein [Roseovarius nubinhibens ISM]
Length = 281
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 4/43 (9%), Positives = 16/43 (37%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
V + G+ L + + +++ + +++D+
Sbjct: 39 TVDVYVAKRALAYGDRLTKEDVVQVKYPARALPEGVFQTVEDL 81
>gi|172060494|ref|YP_001808146.1| Flp pilus assembly protein CpaB [Burkholderia ambifaria MC40-6]
gi|171993011|gb|ACB63930.1| Flp pilus assembly protein CpaB [Burkholderia ambifaria MC40-6]
Length = 311
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 14/142 (9%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
+ A+ VV + + G+ + LK + + +VG V R +
Sbjct: 39 QVIAASPVPVVVATRALPVGQPIAADALKVQ--PIAPVPTGAFADPAILVGRVPARDIPA 96
Query: 79 DHVIPLSVLHRPYV--ISRGAKVRIILTQGNMTISTAGIALSDASIGDV-IAVKNIDTGV 135
+ L + G + I + G L + DV + +K +G
Sbjct: 97 SAPVVSDSLVSGLAEDVQPGERAIAIRVDET---NAVGNRLRPGNFVDVFVNLKREASGP 153
Query: 136 MVSGSVVD------TGTVRVVV 151
M+ G V VRV+
Sbjct: 154 MLDGEVSQTQARLLMSKVRVLS 175
>gi|320161465|ref|YP_004174689.1| hypothetical protein ANT_20630 [Anaerolinea thermophila UNI-1]
gi|319995318|dbj|BAJ64089.1| hypothetical protein ANT_20630 [Anaerolinea thermophila UNI-1]
Length = 376
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 43/119 (36%), Gaps = 7/119 (5%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-HSIKDVVGLVTR 73
S + V+ I+ G NE+ + + ++ I++V+G +
Sbjct: 45 TSAPPTPVEEMTSIVISVQPISRGLEFNETNVTTIPYPKKDLVEGAFITDIQEVLGKRAK 104
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS----IGDVIAV 128
+ I +++L P ++ + + G + I+ LS + GD + V
Sbjct: 105 FDIEARTPITMTMLVDP--TTKNSPAAFQIPPGQVAITIPVSKLSSVAYGLEPGDHVNV 161
>gi|284033647|ref|YP_003383578.1| SAF domain-containing protein [Kribbella flavida DSM 17836]
gi|283812940|gb|ADB34779.1| SAF domain protein [Kribbella flavida DSM 17836]
Length = 203
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 8/84 (9%), Positives = 24/84 (28%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ L S + + + + G ++ +++ S + D+ V
Sbjct: 31 FALVAVSPPPAASTPVLAAARDLPGGLTPAAGDIRTLRLPTSTVPAGVLPPGTDLSHRVL 90
Query: 73 RRVLLPDHVIPLSVLHRPYVISRG 96
+ + + P + G
Sbjct: 91 ATAVRSGEPLTDARFLTPTAVPPG 114
>gi|50841975|ref|YP_055202.1| hypothetical protein PPA0492 [Propionibacterium acnes KPA171202]
gi|50839577|gb|AAT82244.1| hypothetical protein PPA0492 [Propionibacterium acnes KPA171202]
Length = 219
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 55 ATSSSGREVIVAAHAIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASIRITEG 113
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 114 TILTSSAVLSGSAVGSGKALVGIHLADSSMVGML-------QVGQRVSVVSPS 159
>gi|315636301|ref|ZP_07891551.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315479390|gb|EFU70073.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 131
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 36/107 (33%), Gaps = 9/107 (8%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V I E ++ S + +V + N + + + H I ++
Sbjct: 20 TVLVSKTAIKYEEKIDPSNVIVKEVESINKACTPLT-----LQQLESNQFVTTHYINKNM 74
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIAL-SDASIGDVIAVKNID 132
+ + ++ G + I G + + + I +KN+D
Sbjct: 75 IICDKDVKSSENEGVVFNFGGVRIEKKGRIIFEN---NEFIRIKNLD 118
>gi|306817241|ref|ZP_07450987.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
gi|307700399|ref|ZP_07637438.1| putative Flp pilus assembly protein CpaB [Mobiluncus mulieris
FB024-16]
gi|304649921|gb|EFM47200.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
gi|307614384|gb|EFN93614.1| putative Flp pilus assembly protein CpaB [Mobiluncus mulieris
FB024-16]
Length = 198
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 30/80 (37%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
V + L A+V V I AG +N L+E ++ + +Y +V G
Sbjct: 23 VVGATIFLPRPAGTRALVARVPICAGCEINPKDLRERRLDPGALPQHYFVQAGEVAGKKA 82
Query: 73 RRVLLPDHVIPLSVLHRPYV 92
L P V+ +L +
Sbjct: 83 AVALEPGTVVAPGLLLENSL 102
>gi|307730007|ref|YP_003907231.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1003]
gi|307584542|gb|ADN57940.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1003]
Length = 317
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ + + VV + ++ AG+ + L+ + V G V
Sbjct: 31 APAPVTSVRQSLFPVVVAARLLPAGKPIAADALRVQPLPIH--PNGAFAEPSLVAGRVPA 88
Query: 74 RVLLPDHVIPLSVL 87
+ + + L
Sbjct: 89 ADIGAEAPVLEEQL 102
>gi|227876349|ref|ZP_03994461.1| hypothetical protein HMPREF0577_1762 [Mobiluncus mulieris ATCC
35243]
gi|269975913|ref|ZP_06182917.1| putative pilus assembly transmembrane protein [Mobiluncus mulieris
28-1]
gi|227842890|gb|EEJ53087.1| hypothetical protein HMPREF0577_1762 [Mobiluncus mulieris ATCC
35243]
gi|269935741|gb|EEZ92271.1| putative pilus assembly transmembrane protein [Mobiluncus mulieris
28-1]
Length = 198
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 30/80 (37%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
V + L A+V V I AG +N L+E ++ + +Y +V G
Sbjct: 23 VVGATIFLPRPAGTRALVARVPICAGCEINPKDLRERRLDPGALPQHYFVQAGEVAGKKA 82
Query: 73 RRVLLPDHVIPLSVLHRPYV 92
L P V+ +L +
Sbjct: 83 AVALEPGTVVAPGLLLENSL 102
>gi|114764945|ref|ZP_01444118.1| CpaB family protein [Pelagibaca bermudensis HTCC2601]
gi|114542657|gb|EAU45681.1| CpaB family protein [Roseovarius sp. HTCC2601]
Length = 286
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 29/116 (25%), Gaps = 6/116 (5%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK--DVVGLVTRRVL 76
++ A G V + I GE+L +K + + V G R V+
Sbjct: 41 AVEAVPTGRIYVMTRPIARGEILTPDAVKLAPWPMEIMPEGIFTEKRPLFVEGDAPRVVV 100
Query: 77 LPDHVIPL--SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAV 128
G R+ + I GD + V
Sbjct: 101 NAMDKFDAVLDGRVSEPGGDAGLTSRLERGERAFAIKVDVATGVSGFLRPGDRVDV 156
>gi|300704929|ref|YP_003746532.1| pilus assembly (cpab), transmembrane protein [Ralstonia
solanacearum CFBP2957]
gi|299072593|emb|CBJ43943.1| Putative pilus assembly (cpaB), transmembrane protein [Ralstonia
solanacearum CFBP2957]
Length = 284
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 26/66 (39%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
I VV + I+ G+ L+ +K + ++++ + G V R L+ +
Sbjct: 36 ITKVVVAAADIDLGQRLSPDFIKTVDWPSASLPPGAISDTHALDGRVVRTSLIRGEPVLE 95
Query: 85 SVLHRP 90
S L
Sbjct: 96 SKLTPQ 101
>gi|116671247|ref|YP_832180.1| hypothetical protein Arth_2701 [Arthrobacter sp. FB24]
gi|116611356|gb|ABK04080.1| hypothetical protein Arth_2701 [Arthrobacter sp. FB24]
Length = 214
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 6/119 (5%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
S+ + A I GE L + ++V ++ G+Y + +
Sbjct: 32 SVAGVVSLVGAADQTTEVYAAKGPIAVGERLTAENVNRVKVRLGDVEGHYVTAEAGLPDG 91
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG------IALSDASIG 123
+ + + V I + + AG +AL DA G
Sbjct: 92 MVAVQRIGPDQLVPRDSLGKPDALNRKPVAITIDEALPEQVAAGSRVDAWVALPDARNG 150
>gi|322434103|ref|YP_004216315.1| Flp pilus assembly protein CpaB [Acidobacterium sp. MP5ACTX9]
gi|321161830|gb|ADW67535.1| Flp pilus assembly protein CpaB [Acidobacterium sp. MP5ACTX9]
Length = 291
Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 7/126 (5%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
V S + +GE L ++ + SN +D+VG + D + L
Sbjct: 41 YVAASRPLQSGEQLKPDSMELVNWPASNPIAGGFLKPEDLVGRSVLYPVEKDQPLT-DKL 99
Query: 88 HRPYVISRGAKVRIILTQGNMTISTA---GIA--LSDASIGDV-IAVKNIDTGVMVSGSV 141
G RI +++ + G+A LS S DV + + V+ +V
Sbjct: 100 LSTAGSGPGLAARIPAGMRAISLKSDEIMGVAGFLSPGSHLDVLVTYRTDKNPEPVTLTV 159
Query: 142 VDTGTV 147
+ V
Sbjct: 160 LQDAEV 165
>gi|289807531|ref|ZP_06538160.1| flagellar basal body P-ring biosynthesis protein FlgA [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 136
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 6/55 (10%), Positives = 17/55 (30%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ G+ V + + G L + + + + I+ + V+
Sbjct: 79 LQVNVQATGNYVAVAAPVARGGKLTPANVTLKRGRLDQLPPRTVLDIRQIQDAVS 133
>gi|313792921|gb|EFS40988.1| SAF domain protein [Propionibacterium acnes HL110PA1]
gi|313802627|gb|EFS43849.1| SAF domain protein [Propionibacterium acnes HL110PA2]
gi|313840265|gb|EFS77979.1| SAF domain protein [Propionibacterium acnes HL086PA1]
gi|314964338|gb|EFT08438.1| SAF domain protein [Propionibacterium acnes HL082PA1]
gi|315078648|gb|EFT50679.1| SAF domain protein [Propionibacterium acnes HL053PA2]
gi|327456876|gb|EGF03531.1| SAF domain protein [Propionibacterium acnes HL092PA1]
Length = 166
Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 2 ATSSSGREVIVAAHAIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASIRITEG 60
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V + +
Sbjct: 61 TILTSSAVLSGSAVGSGKALVGIHLADSSMVGML-------QVGQRVSVVSPN 106
>gi|167039378|ref|YP_001662363.1| SAF domain-containing protein [Thermoanaerobacter sp. X514]
gi|300914019|ref|ZP_07131336.1| SAF domain protein [Thermoanaerobacter sp. X561]
gi|307725296|ref|YP_003905047.1| SAF domain-containing protein [Thermoanaerobacter sp. X513]
gi|166853618|gb|ABY92027.1| SAF domain [Thermoanaerobacter sp. X514]
gi|300890704|gb|EFK85849.1| SAF domain protein [Thermoanaerobacter sp. X561]
gi|307582357|gb|ADN55756.1| SAF domain protein [Thermoanaerobacter sp. X513]
Length = 181
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
V+ I AG V++E +K + + S +R +YA S+ DVVG V + + I
Sbjct: 29 TEKVVIVEKDIPAGTVISEDAVKVVDIPASAVRPDYARSLTDVVGKVVKEGRVRGDFI 86
>gi|320107043|ref|YP_004182633.1| hypothetical protein AciPR4_1833 [Terriglobus saanensis SP1PR4]
gi|319925564|gb|ADV82639.1| hypothetical protein AciPR4_1833 [Terriglobus saanensis SP1PR4]
Length = 176
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 92 VISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT-----GVMVSGSVVDTGT 146
+ G V ++ QG I GI+ ++ IGD I ++ I + + + SV G
Sbjct: 112 AVHAGQTVDLLYEQGPAKIHLRGISEANGYIGDRIVLRPIASLGSPPELRLHASVTAEGE 171
>gi|311113094|ref|YP_003984316.1| N-acylneuraminate-9-phosphate synthase [Rothia dentocariosa ATCC
17931]
gi|310944588|gb|ADP40882.1| N-acylneuraminate-9-phosphate synthase [Rothia dentocariosa ATCC
17931]
Length = 747
Score = 38.8 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
+V + I GEV+ E+ + ++ NY ++G +R + L
Sbjct: 405 LVATRGIAKGEVITEADVTVKS-PGRGLQPNYL---PQLLGRTIQRDVEEGSFFFEGDLK 460
Query: 89 RPYVISRG 96
V R
Sbjct: 461 DDLVTRRD 468
>gi|302381757|ref|YP_003817580.1| Flp pilus assembly protein CpaB [Brevundimonas subvibrioides ATCC
15264]
gi|302192385|gb|ADK99956.1| Flp pilus assembly protein CpaB [Brevundimonas subvibrioides ATCC
15264]
Length = 310
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 5/39 (12%), Positives = 14/39 (35%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ +V + + G+ L E+ L+ + +
Sbjct: 47 MAKVLVAARDLAPGQRLVEADLEWKDWPVDEVNPAFITD 85
>gi|91775996|ref|YP_545752.1| Flp pilus assembly CpaB [Methylobacillus flagellatus KT]
gi|91709983|gb|ABE49911.1| Flp pilus assembly CpaB [Methylobacillus flagellatus KT]
Length = 299
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
+ +V+ VV I AG VL L + + + + D+VG + +
Sbjct: 37 APLPAVLYPLVVARQDIPAGHVLLPEDLALEE--SESQNPLAYSATTDLVGRMVESSIEK 94
Query: 79 DHVIPLSVLHRP 90
+ I S +
Sbjct: 95 NAPILSSHFAQR 106
>gi|85713504|ref|ZP_01044494.1| Flp pilus assembly CpaB [Nitrobacter sp. Nb-311A]
gi|85699408|gb|EAQ37275.1| Flp pilus assembly CpaB [Nitrobacter sp. Nb-311A]
Length = 260
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 32/115 (27%), Gaps = 15/115 (13%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS------IKDVVGLVTRRVLLP 78
+V I G+ + + + + ++ + G + R +
Sbjct: 40 TVDVLVAKSDIQLGQTVTANDVAWQTWPADSASNSFIRRDRRPDATTQLAGSIARSPFIA 99
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG-----DVIAV 128
I V ++G+ + M + I+ + G D + V
Sbjct: 100 GEPIR----EPKLVSAKGSGFMAAILPTGMRAISTEISPETGAGGFILPNDRVDV 150
>gi|320526981|ref|ZP_08028170.1| putative Flp pilus assembly protein CpaB [Solobacterium moorei
F0204]
gi|320132566|gb|EFW25107.1| putative Flp pilus assembly protein CpaB [Solobacterium moorei
F0204]
Length = 237
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 47/146 (32%), Gaps = 10/146 (6%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+L F Y+ +L + I + L +QV ++ + D
Sbjct: 22 ILAFRYYLAKTINL-----KTTYIAKHDIPPRTQIQTEDLTTIQVPEKYMQAYTWNEKSD 76
Query: 67 VVGL--VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGD 124
+VG + ++ + +L+ + A ++ T+ T AL G
Sbjct: 77 IVGKYTTVQGMIPKGSMFYKDMLYNEKEVRDLAITKLQEGMTIFTLETNVSALGSIEEGM 136
Query: 125 VIAVKNIDTGV---MVSGSVVDTGTV 147
+ + + ++G ++ V
Sbjct: 137 YVDIYVSISQKKDVPITGILIRHAEV 162
>gi|326330144|ref|ZP_08196455.1| putative membrane protein [Nocardioidaceae bacterium Broad-1]
gi|325951957|gb|EGD43986.1| putative membrane protein [Nocardioidaceae bacterium Broad-1]
Length = 223
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 29/105 (27%), Gaps = 7/105 (6%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
+V I + S ++ +++++ + A +VG + ++
Sbjct: 59 TEEVLVARTTIERWSTIEASDIERVRISSDAALTPVPASDYNKIVGTRAAVDIAAGGLLT 118
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
G + + AL GD + V
Sbjct: 119 PESTTSDGFPPTGKSIVGVSLTAA---QAPATAL---RGGDPVRV 157
>gi|221633004|ref|YP_002522229.1| putative membrane fimbriae assembly protein [Thermomicrobium roseum
DSM 5159]
gi|221156453|gb|ACM05580.1| putative membrane fimbriae assembly protein [Thermomicrobium roseum
DSM 5159]
Length = 331
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 24/57 (42%)
Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
+ + AG VL + ++ +++ A VVGLV L+ I L+ L
Sbjct: 49 AARDVRAGSVLTSEDVTVVETDPASVAPGTARQPDQVVGLVVAGDLVAGQRILLANL 105
>gi|89068016|ref|ZP_01155433.1| CpaB family protein [Oceanicola granulosus HTCC2516]
gi|89046255|gb|EAR52312.1| CpaB family protein [Oceanicola granulosus HTCC2516]
Length = 281
Score = 38.8 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 39/138 (28%), Gaps = 11/138 (7%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV 71
L + A+ + I GE L + ++ + + +++
Sbjct: 34 LARERAVAAQATPTVEVYAVTRQIGYGEQLTPDDVTLVKYAEPFLPDGVFRAEEELFPEG 93
Query: 72 TRRVLLPDHVIPLSV-LHRPYVISRGAKVRIILTQG----NMTISTAGIALSDA--SIGD 124
++ + + ++ + V G I G I + GD
Sbjct: 94 DTQLRVVLRPMEVNEPVLAVKVTEPGEDAGITSRLGRGMRAFAIRVDVASGVSGFLRPGD 153
Query: 125 VIAV----KNIDTGVMVS 138
+ + +N G V+
Sbjct: 154 KVDIYWTGRNSRGGEEVT 171
>gi|84498693|ref|ZP_00997446.1| hypothetical protein JNB_16856 [Janibacter sp. HTCC2649]
gi|84381030|gb|EAP96917.1| hypothetical protein JNB_16856 [Janibacter sp. HTCC2649]
Length = 191
Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 8/99 (8%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRG---NYAHSIKDVVGLVTRRVLLPDHV 81
A+V + + +G VL L+ Q+ + ++D+VG + + +
Sbjct: 18 TTSALVAARDLPSGAVLTADDLRTTQIRGESDSPGTVGAVGRVRDLVGRLLTSPVAAGEL 77
Query: 82 IPLSVLHRPYVIS--RGAKV---RIILTQGNMTISTAGI 115
+ S L G V + + ++ + +AG
Sbjct: 78 VTTSRLVPRTAAEGLPGDTVAAHVLHADERSLDLVSAGQ 116
>gi|149179166|ref|ZP_01857734.1| flagellar P-ring protein precursor [Planctomyces maris DSM 8797]
gi|148841984|gb|EDL56379.1| flagellar P-ring protein precursor [Planctomyces maris DSM 8797]
Length = 591
Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 36/114 (31%), Gaps = 4/114 (3%)
Query: 34 VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
+ L L++ + S G + P P+++
Sbjct: 141 DLVRQAALTAG-LQQERSPGSGQTVQQIALSAGSPGKMISAGYSPRQNPTQPD---PFLV 196
Query: 94 SRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGTV 147
+ V+I+ ++I G L + + I V +T ++ +V+ V
Sbjct: 197 QQQQPVQIVAAYHGISIKLPGTPLQNGQLHQKIKVVPANTNTLMPATVLSQNLV 250
>gi|145222484|ref|YP_001133162.1| SAF domain-containing protein [Mycobacterium gilvum PYR-GCK]
gi|315442930|ref|YP_004075809.1| flagellar basal body P-ring biosynthesis protein [Mycobacterium sp.
Spyr1]
gi|145214970|gb|ABP44374.1| SAF domain [Mycobacterium gilvum PYR-GCK]
gi|315261233|gb|ADT97974.1| flagellar basal body P-ring biosynthesis protein [Mycobacterium sp.
Spyr1]
Length = 217
Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 7/57 (12%), Positives = 15/57 (26%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
VV + G L + ++ + + +VV V+
Sbjct: 54 EVVVTVRDLAPGVALTAADVRVESRAAPLLPDGALTDVDEVVDATLAGPARQGEVLT 110
>gi|210629922|ref|ZP_03296169.1| hypothetical protein COLSTE_00052 [Collinsella stercoris DSM 13279]
gi|210160739|gb|EEA91710.1| hypothetical protein COLSTE_00052 [Collinsella stercoris DSM 13279]
Length = 258
Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 41/138 (29%), Gaps = 16/138 (11%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ + V + I+ GE +++ + ++ + S+ DV G
Sbjct: 42 ARRETLEQYGGELVSVCVATRDIDPGEQIDDGNAVVTEWVSTLLPAEAVTSLADVAGRTA 101
Query: 73 RRVLLPDHVIPLSVLHRP---YVISRGAKVRIIL------------TQGNMTISTAGIAL 117
+ + + + + RG + + + G AL
Sbjct: 102 TARIPAHAPLSEAYFEQRESAVDVPRGKVAVSVASDAEHAVGGVLERGDLVDVYVQGDAL 161
Query: 118 SDASIG-DVIAVKNIDTG 134
+D +VI + +G
Sbjct: 162 ADKLTDAEVIDTSALASG 179
>gi|194335912|ref|YP_002017706.1| Flp pilus assembly protein CpaB [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308389|gb|ACF43089.1| Flp pilus assembly protein CpaB [Pelodictyon phaeoclathratiforme
BU-1]
Length = 263
Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 11 SLYVLSL-DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG 69
+ ++ + S+ + + VV I AG+ + +++ + S + + + I VVG
Sbjct: 18 AAFLAARWMSVAQTSMSRVVVVEQPIEAGKAIKAHQIRSIDWPGSAVPRDASTRIASVVG 77
Query: 70 LVTRRVLLPDHVIPLSVLHR 89
+ ++P + L
Sbjct: 78 RIALVSMMPGEPVLPGKLAP 97
>gi|85707703|ref|ZP_01038769.1| pilus assembly protein CpaB [Erythrobacter sp. NAP1]
gi|85689237|gb|EAQ29240.1| pilus assembly protein CpaB [Erythrobacter sp. NAP1]
Length = 365
Score = 38.8 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 39/129 (30%), Gaps = 22/129 (17%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVIP 83
+V + + AG ++ + ++ Y + ++G V R + +
Sbjct: 46 VLVANRALPAGTIITADAMGYQMWPEELVQDAYFIEGESDMSQLLGTVVRFPVTAGEPVT 105
Query: 84 LSVLHRPYVISRGAK-VRIILTQGNMTISTAGIALSDASI-----GDVIAVKNIDTGVMV 137
++S G + M T ++ GD + V ++
Sbjct: 106 Q-----GSLVSPGDRGFLAAALGPGMRAVTVPVSAKTGVAGFVFPGDRVDV-------VL 153
Query: 138 SGSVVDTGT 146
+ +V G
Sbjct: 154 TQTVSGEGR 162
>gi|315106591|gb|EFT78567.1| SAF domain protein [Propionibacterium acnes HL030PA1]
Length = 166
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+S +V + I G V+ S L +++ + A + V G +
Sbjct: 2 ATSSSGREVIVAAHAIEGGRVIQRSDLHTVRIDPGVLPHETAT-LAQVEGRQASIRITEG 60
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
++ S + + G + I + + +G ++V +
Sbjct: 61 TILTSSAVLSGSAVGSGKALVGIHLADSSMVGML-------QVGQRVSVVSPS 106
>gi|309778770|ref|ZP_07673543.1| Flp pilus assembly protein CpaB [Ralstonia sp. 5_7_47FAA]
gi|308922478|gb|EFP68102.1| Flp pilus assembly protein CpaB [Ralstonia sp. 5_7_47FAA]
Length = 307
Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 33/107 (30%), Gaps = 10/107 (9%)
Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
+ VV + + AG+ + ++ Q+ + + VVG + +
Sbjct: 43 AVYPVVVTTKPLEAGKPITADQVAIEQLPIN--PAEAFSDVTKVVGREPILPVGVGVPLI 100
Query: 84 LSVLHRPYV--ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
S L + G + I + + + GD + V
Sbjct: 101 ASQLSSGLAQQVEAGQRAVAINVDEVIGVGNRVM------PGDYVDV 141
>gi|260574617|ref|ZP_05842620.1| Flp pilus assembly protein CpaB [Rhodobacter sp. SW2]
gi|259023034|gb|EEW26327.1| Flp pilus assembly protein CpaB [Rhodobacter sp. SW2]
Length = 284
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 31/111 (27%), Gaps = 7/111 (6%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS-----IKDVVGLVTRRVLLPD 79
+ V + +N G+ L + ++++ + + + VG +
Sbjct: 47 LVEVYVVNKPLNYGDPLTKEDVQKIYWPQNALPETIFTDEALLFPANAVGQRFVLRQMEK 106
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAV 128
L+V G R+ I + GD + V
Sbjct: 107 FEPLLAVKVTEPGQDAGLTARLAKGMRAFAIKVDATSGVSGFLHPGDNVDV 157
>gi|157738158|ref|YP_001490842.1| hypothetical protein Abu_1950 [Arcobacter butzleri RM4018]
gi|157700012|gb|ABV68172.1| hypothetical protein Abu_1950 [Arcobacter butzleri RM4018]
Length = 131
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 36/107 (33%), Gaps = 9/107 (8%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V I E ++ S + +V + N + + + H I ++
Sbjct: 20 TVLVSKTAIKYEEKIDPSNVIVKEVESINKACTPLT-----LQQLESNQFITTHYINKNM 74
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIAL-SDASIGDVIAVKNID 132
+ + ++ G + I G + + + I +KN+D
Sbjct: 75 IICDKDVKSSENEGVVFNFGGVKIEKKGRIIFEN---NEFIRIKNLD 118
>gi|170720035|ref|YP_001747723.1| Flp pilus assembly protein CpaB [Pseudomonas putida W619]
gi|169758038|gb|ACA71354.1| Flp pilus assembly protein CpaB [Pseudomonas putida W619]
Length = 315
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 35/121 (28%), Gaps = 16/121 (13%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + A L + ++ + + V+G + R L + S
Sbjct: 62 PIVVLRKALPANTPLTAEDVLLERLQV--VPAGAFQQVDHVIGRSSARPLAAGSWLDESS 119
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK--------NIDTGVM 136
++R I + + + + + + GD + V N +
Sbjct: 120 FQPGGPLAR----MIRAHERAVAVGVDEVVGAAGQLYPGDFVDVLLYLREEANNPQSSAQ 175
Query: 137 V 137
V
Sbjct: 176 V 176
>gi|188581659|ref|YP_001925104.1| Flp pilus assembly protein CpaB [Methylobacterium populi BJ001]
gi|179345157|gb|ACB80569.1| Flp pilus assembly protein CpaB [Methylobacterium populi BJ001]
Length = 260
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLV------------T 72
+ +V + + G+ L L+ + I GL
Sbjct: 45 MSEVLVAAAELPMGQTLKPEDLRWIPWPEQAIAPGLIDRRAAPKGLEDAVGAIIRTGFSA 104
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
+ P+ +I ++ G + I T + S G L + + D+I N
Sbjct: 105 NEPIRPERLIKAGSGFMSAILPPGMRAVAITTDTRGSSSAGGFILPNDHV-DIIKTSNEG 163
Query: 133 TGV 135
+
Sbjct: 164 SDQ 166
>gi|221066740|ref|ZP_03542845.1| Flp pilus assembly protein CpaB [Comamonas testosteroni KF-1]
gi|220711763|gb|EED67131.1| Flp pilus assembly protein CpaB [Comamonas testosteroni KF-1]
Length = 352
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 12/107 (11%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + + AG+ L LK + T + G S + VG T L D +
Sbjct: 59 MHDVVVTAKPVAAGQKLTAEDLKLVSKTAAVADG--VLSAEAAVGRTTLTALAADAPLLE 116
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA---SIGDVIAV 128
L G ++I Q ++I+ ++ GD + V
Sbjct: 117 QQLIS------GLSLQIEPGQRALSIAVK-EPMAAGNHVRPGDFVDV 156
>gi|260906843|ref|ZP_05915165.1| SAF domain-containing protein [Brevibacterium linens BL2]
Length = 216
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 32/94 (34%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
A+ + + G+V++ L +V ++I Y + + + R ++
Sbjct: 37 AANATTRVWASASPLVPGQVVSADDLTIAEVNLADIGDKYLSADAGIPDRSSVRTVIAAG 96
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
+ + P G V I + T+ G
Sbjct: 97 ELLPASALAPVAELDGRIVAIDVAGSVPTVVDTG 130
>gi|254823442|ref|ZP_05228443.1| hypothetical protein MintA_26166 [Mycobacterium intracellulare ATCC
13950]
Length = 216
Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 25/83 (30%), Gaps = 4/83 (4%)
Query: 5 RFLLFFSLYVLSLDSLF----ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
R + L VL+ + A VV + G L + ++ + S +
Sbjct: 19 RRVAAGGLVVLAGIATLRSNPAGDYTQVVVADHDLRPGNALTAADVRIEKRLASTVPDGA 78
Query: 61 AHSIKDVVGLVTRRVLLPDHVIP 83
+ VVG V+
Sbjct: 79 RADVGAVVGSTLAGPARRGEVLT 101
>gi|187926426|ref|YP_001892771.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12J]
gi|241665913|ref|YP_002984272.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12D]
gi|187728180|gb|ACD29344.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12J]
gi|240867940|gb|ACS65600.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12D]
Length = 307
Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 4/81 (4%)
Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
+ VV + + AG+ + ++ Q+ + + VVG + +
Sbjct: 43 AVYPVVVTTKPLEAGKPITADQVAIEQLPIN--PAEAFSDVTKVVGREPILPVGVGVPLI 100
Query: 84 LSVLHRPYV--ISRGAKVRII 102
S L + G + I
Sbjct: 101 ASQLSSGLAQQVEAGQRAVAI 121
>gi|21234163|ref|NP_639740.1| hypothetical protein SCP1.167 [Streptomyces coelicolor A3(2)]
gi|13620649|emb|CAC36688.1| putative membrane protein [Streptomyces coelicolor A3(2)]
Length = 227
Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 2/107 (1%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYA 61
C+ + +L + + + + + AG+ L + + +V+ + A
Sbjct: 39 CIVLAVICALTAAWAVNSASDRT-RVLALARDVPAGQALTSADVTVAEVSADAALSPLPA 97
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNM 108
VVG T L ++ S L + + + + M
Sbjct: 98 TDKSSVVGKRTAVDLRKGGLLLASHLAPGSGLGDDQEQVGVQIKRGM 144
>gi|119773844|ref|YP_926584.1| Flp pilus assembly protein CpaB-like protein [Shewanella
amazonensis SB2B]
gi|119766344|gb|ABL98914.1| Flp pilus assembly protein CpaB-like protein [Shewanella
amazonensis SB2B]
Length = 298
Score = 38.4 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLVTRRVLLPDHVI 82
+ VV + + G++++E+ + + I + +V G + + P +
Sbjct: 49 MVDVVVATQELRKGDIVDETNMSVRSIRADVIPLDAIRPSQFNEVAGQMLLSEMSPGRPL 108
Query: 83 PLSVLH 88
+ L
Sbjct: 109 ISAYLP 114
>gi|269125159|ref|YP_003298529.1| SAF domain-containing protein [Thermomonospora curvata DSM 43183]
gi|268310117|gb|ACY96491.1| SAF domain protein [Thermomonospora curvata DSM 43183]
Length = 378
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
A + + + G L E ++ + + ++ + VVG V + +
Sbjct: 46 APAGVRVLTAARDLPGGTELREQDIRPVMMPSAAVPDGALRD--RVVGRVLAGPMRRGEI 103
Query: 82 IP 83
+
Sbjct: 104 VT 105
>gi|111220768|ref|YP_711562.1| hypothetical protein FRAAL1311 [Frankia alni ACN14a]
gi|111148300|emb|CAJ59972.1| hypothetical protein; putative signal peptide [Frankia alni ACN14a]
Length = 260
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 38/133 (28%), Gaps = 16/133 (12%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA---HSIKDVVGLVT 72
+ A VV + AG V+ L + ++D+ G
Sbjct: 49 ARLFASADATRQWVVAKGSLPAGHVIVAGDLTTVSARLDARTSGRYYPGGRLRDLTGATL 108
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNID 132
R + ++ + V +I+ G + AL GD + V
Sbjct: 109 ARPVDAGELVSGADF-AGRNTQSTRLVPVIVKAGRL------PALE---PGDHVDVYVFS 158
Query: 133 TGVMVSGSVVDTG 145
G S + +G
Sbjct: 159 AG---SAAATGSG 168
>gi|229816461|ref|ZP_04446762.1| hypothetical protein COLINT_03515 [Collinsella intestinalis DSM
13280]
gi|229808003|gb|EEP43804.1| hypothetical protein COLINT_03515 [Collinsella intestinalis DSM
13280]
Length = 226
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 27/69 (39%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
V I G+ ++E +K ++ +S + + S+ D GLV + + +
Sbjct: 49 RVCVALREIEPGDEISEGNVKVVEWVSSLMPEDALTSMGDASGLVATARIPAHTPLAKAH 108
Query: 87 LHRPYVISR 95
R + +
Sbjct: 109 FLRDERVVQ 117
>gi|75674500|ref|YP_316921.1| Flp pilus assembly CpaB [Nitrobacter winogradskyi Nb-255]
gi|74419370|gb|ABA03569.1| Flp pilus assembly CpaB [Nitrobacter winogradskyi Nb-255]
Length = 275
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 33/116 (28%), Gaps = 15/116 (12%)
Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK------DVVGLVTRRVLL 77
+V I G+ + + + + ++ + + G + R +
Sbjct: 54 RTVDVLVAKSDIPLGQAVTANDVAWQTWPADSASHSFIRRDQRPDATTQLAGSIARSPFI 113
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG-----DVIAV 128
I V ++G+ + M + I+ + G D + V
Sbjct: 114 AGEPIR----ELKLVSAKGSGFMAAILPTGMRAISTEISPETGAGGFILPNDRVDV 165
>gi|41407019|ref|NP_959855.1| hypothetical protein MAP0921c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395370|gb|AAS03238.1| hypothetical protein MAP_0921c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 226
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 17/59 (28%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
VV + G L + ++ + + + I V+G V+
Sbjct: 53 YAPVVVAEHDLRPGAALTAADVRLEKRLAATVPEGSPAEIGAVLGSTLAGPARRGEVLT 111
>gi|254773979|ref|ZP_05215495.1| hypothetical protein MaviaA2_04794 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 226
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 17/59 (28%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
VV + G L + ++ + + + I V+G V+
Sbjct: 53 YAPVVVAEHDLRPGAALTAADVRLEKRLAATVPEGSPAEIGAVLGSTLAGPARRGEVLT 111
>gi|220905152|ref|YP_002480464.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869451|gb|ACL49786.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 356
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
+V + I AG + + L + + NY +V+G+ R L D V+ S L
Sbjct: 296 LVTARAIPAGTPVTAADLTWKRPAHGISPRNY----DEVLGMRARHDLAEDTVLHWSDLE 351
>gi|325111215|ref|YP_004272283.1| Flp pilus assembly protein CpaB [Planctomyces brasiliensis DSM
5305]
gi|324971483|gb|ADY62261.1| Flp pilus assembly protein CpaB [Planctomyces brasiliensis DSM
5305]
Length = 349
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 6/104 (5%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
+ I AG ++ + ++ + + + ++G + + I S L
Sbjct: 45 VPMAGSDIPAGTLITSDHIVRGRLREDKMTRETILNDEAIIGRYSLTDIKQAQPILTSDL 104
Query: 88 HRPYVISRGAKVRIILTQGNMTIST-AGIALSDASI--GDVIAV 128
Y + + +T+S ++ D I GD + V
Sbjct: 105 ---YAPGERPPLELEPGMQAVTVSLGDSTSVVDGLIEPGDYVDV 145
>gi|213968017|ref|ZP_03396163.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301383667|ref|ZP_07232085.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. tomato
Max13]
gi|302059964|ref|ZP_07251505.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. tomato
K40]
gi|302131630|ref|ZP_07257620.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213927360|gb|EEB60909.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 357
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 36/116 (31%), Gaps = 8/116 (6%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRR 74
+ ++ + VV + I A + L ++ + I +VG + R
Sbjct: 91 PVTPPVEEALRHNVVVLARDIPAYTPITVEDLAIERLKIA--PPGSFERIDSLVGRSSWR 148
Query: 75 VLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
L S ++R I + + + + + + GD + V
Sbjct: 149 TLTAGTWPSESSFDAGGTLAR----MIRPYERALALQVDEVTGASGQLSPGDYVDV 200
>gi|158314424|ref|YP_001506932.1| SAF domain-containing protein [Frankia sp. EAN1pec]
gi|158109829|gb|ABW12026.1| SAF domain protein [Frankia sp. EAN1pec]
Length = 229
Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+V + + G VL + ++E++V + A V+G L
Sbjct: 60 ARVGSREPVLVLARPVTVGHVLVAADVREVRVAADGVDTVPAGERDSVLGKPVAYSLPAG 119
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGN 107
V+ + + V G + + +
Sbjct: 120 TVLSRAAVGAAQVPPPGEAIAAVALKAG 147
>gi|86147468|ref|ZP_01065780.1| Flp pilus assembly protein CpaB [Vibrio sp. MED222]
gi|85834761|gb|EAQ52907.1| Flp pilus assembly protein CpaB [Vibrio sp. MED222]
Length = 249
Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 23/70 (32%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V + VV S I AG V+ + L + I N +++G V
Sbjct: 32 VQPTIEVEEVERHPVVVASQEIEAGTVIEDQYLTTKLMEVDWINENNYSDQNELIGKVVA 91
Query: 74 RVLLPDHVIP 83
+ V+
Sbjct: 92 NTIYAGEVLH 101
>gi|167036494|ref|YP_001664072.1| SAF domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320114922|ref|YP_004185081.1| SAF domain-containing protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166855328|gb|ABY93736.1| SAF domain [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319928013|gb|ADV78698.1| SAF domain protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 180
Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
+ F+ ++ VV I AG V+++ +K V S +R NYA S+ D
Sbjct: 12 AVVFAAFMFVFMQ-NIQKTEKVVVVEKDIPAGTVISQDAVKVTDVPASVVRPNYAKSLAD 70
Query: 67 VVGLVTRRVLLPDHVI 82
V+G V + + I
Sbjct: 71 VIGKVVKEGRVQGDFI 86
>gi|161524906|ref|YP_001579918.1| Flp pilus assembly protein CpaB [Burkholderia multivorans ATCC
17616]
gi|189350344|ref|YP_001945972.1| pilus assembly protein [Burkholderia multivorans ATCC 17616]
gi|160342335|gb|ABX15421.1| Flp pilus assembly protein CpaB [Burkholderia multivorans ATCC
17616]
gi|189334366|dbj|BAG43436.1| pilus assembly protein [Burkholderia multivorans ATCC 17616]
Length = 313
Score = 38.0 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
A+ VV + + G+ + LK +++ +VG V R +
Sbjct: 39 PTVAANPVSVVVATRTLPVGQPIAADALKVQ--PIASVPAGAFADPAVLVGRVPARDIPA 96
Query: 79 DHVIPLSVL 87
+ L
Sbjct: 97 SAPVVSDAL 105
>gi|33593024|ref|NP_880668.1| hypothetical protein BP1995 [Bordetella pertussis Tohama I]
gi|33563399|emb|CAE42275.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332382436|gb|AEE67283.1| hypothetical protein BPTD_1965 [Bordetella pertussis CS]
Length = 313
Score = 38.0 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
VV I AG+ L LK + N + ++G + R+ + +
Sbjct: 48 TYPVVVAGKPIAAGDRLAADLLKIERWPV--QPANGYAESEALLGQMVRQDIPAGEPVTA 105
Query: 85 SVL 87
+L
Sbjct: 106 PML 108
>gi|145295050|ref|YP_001137871.1| hypothetical protein cgR_0993 [Corynebacterium glutamicum R]
gi|140844970|dbj|BAF53969.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 217
Score = 38.0 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 9/109 (8%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
AVV I AG + S L + S + SI DVVGLV L +
Sbjct: 44 TAVVIVQEIPAGTKVESSDLGLQAIPTSLLPSTSYDSIDDVVGLVAASTLSSGEIATKPR 103
Query: 87 LHRPYVISRGAKVRIILTQGNM-TISTAGIALSDASI------GDVIAV 128
+I + V + + I+ ++L++ S+ GD I+V
Sbjct: 104 FVGTELI--NSIVTNVTDGSLVEEINMVPLSLAEPSVIPLLQHGDTISV 150
>gi|298345527|ref|YP_003718214.1| hypothetical protein HMPREF0573_10401 [Mobiluncus curtisii ATCC
43063]
gi|298235588|gb|ADI66720.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
Length = 211
Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 1/92 (1%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
V ++ + V+ + + + G +V + AG + ++ + G Y
Sbjct: 22 VALMILAVILVIVTVRVTSHLEG-YLVAKTTLVAGHTVQSGDIEVISANPGRAAGQYLRE 80
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISR 95
+ G V + + +IP + L + +
Sbjct: 81 GEMQEGSVVVQTIAGGQLIPKASLSQTEPFRK 112
>gi|330811038|ref|YP_004355500.1| hypothetical protein PSEBR_a4092 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379146|gb|AEA70496.1| Hypothetical protein; putative exported protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 271
Score = 38.0 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 26/59 (44%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
+ VV +V I G+++ ++ +++ I + S + VG + +L ++
Sbjct: 39 LRSVVVATVEIPFGQMVEAQQVTTVRMPMDTIPDDAFDSSEQAVGKIATFDILRGDIVR 97
>gi|237798382|ref|ZP_04586843.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021234|gb|EGI01291.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 318
Score = 38.0 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 44/132 (33%), Gaps = 19/132 (14%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ VV + I A + + ++ + S++ +VG + R L + S
Sbjct: 64 NVVVVARDIPAYTPITADDVVIERLKVA--PPGSFDSVERLVGRSSWRTLNAGTWLSESS 121
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK----------NIDTG 134
++R I + + + + + + GD + V N +
Sbjct: 122 FDAGGTLAR----MIRPYERALALQVDEVISASGQLSPGDYVDVLLYLPEDTLNPNRSSQ 177
Query: 135 VMVSG-SVVDTG 145
V+V ++ G
Sbjct: 178 VVVPALRILGIG 189
>gi|170750188|ref|YP_001756448.1| Flp pilus assembly protein CpaB [Methylobacterium radiotolerans JCM
2831]
gi|170656710|gb|ACB25765.1| Flp pilus assembly protein CpaB [Methylobacterium radiotolerans JCM
2831]
Length = 271
Score = 38.0 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 38/115 (33%), Gaps = 13/115 (11%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV------------VGLVT 72
+V ++ + G+VL + L+ + + Y + G +T
Sbjct: 44 TTDVLVAAIDMPMGQVLRAADLRWQPWPDGAVANGYMTRKINPKALEETVGASVRSGFLT 103
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIA 127
+ ++ ++ G + I+T T S G L + + DVI
Sbjct: 104 GEPIRAQKLVRPESGFMAAILPPGMRAVAIVTDSRGTNSAGGFILPNDRV-DVIR 157
>gi|325525577|gb|EGD03367.1| Flp pilus assembly protein CpaB [Burkholderia sp. TJI49]
Length = 277
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 35/98 (35%), Gaps = 3/98 (3%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L S + V + +N GE L +++ + ++ K++ G V R L
Sbjct: 28 LVQTSTSSVTPIAVAATDLNLGEPLGPNQVHTVSWPTGSVPPGAFTDPKELDGRVVRTSL 87
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAG 114
+ S L + + ++ +G+ I+
Sbjct: 88 ARGEPVIESKLAP---VGTKGGLSAVIAEGSRAITVRV 122
>gi|92116014|ref|YP_575743.1| Flp pilus assembly CpaB [Nitrobacter hamburgensis X14]
gi|91798908|gb|ABE61283.1| Flp pilus assembly CpaB [Nitrobacter hamburgensis X14]
Length = 260
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 34/115 (29%), Gaps = 15/115 (13%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK------DVVGLVTRRVLLP 78
+V I G+ + + + ++ ++ + + G + R +
Sbjct: 40 TVDVLVAKSDIPLGQAVTANDVAWQAWPANSASSSFIRRDQRPDATTQLAGSIARSPFIA 99
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG-----DVIAV 128
I V ++G+ + M + I+ + G D + V
Sbjct: 100 GEPIR----ELKLVSAKGSGFMAAILPTGMRAISTEISPETGAGGFILPNDRVDV 150
>gi|319943381|ref|ZP_08017663.1| SAF domain protein [Lautropia mirabilis ATCC 51599]
gi|319743196|gb|EFV95601.1| SAF domain protein [Lautropia mirabilis ATCC 51599]
Length = 339
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRR 74
+ A + VV + ++ GE+++ + V + + +VG
Sbjct: 46 RLAPVAQQMVDVVVANATLDKGEIVSGETMAIRSVPAEYVSSSVVTPEQFDALVGQRLLL 105
Query: 75 VLLPDHVIPLSVL 87
+ P ++ + +
Sbjct: 106 PMRPGEMLSTAAV 118
>gi|289675700|ref|ZP_06496590.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. syringae
FF5]
Length = 160
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ VV + I A + L ++ + + +I +VG + R L + S
Sbjct: 65 NVVVLARDIPAYTAITADDLTIERLKVAPL--GSFEAIDKIVGRSSWRTLTAGSWLTESN 122
Query: 87 LHR 89
Sbjct: 123 FEA 125
>gi|33600810|ref|NP_888370.1| hypothetical protein BB1825 [Bordetella bronchiseptica RB50]
gi|33568410|emb|CAE32322.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 313
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
VV I AG+ L LK + N + ++G + R+ + +
Sbjct: 48 TYPVVVAGKPIAAGDRLAADLLKIERWPV--QPANGYAESEALLGQMVRQDIPAGEPVTA 105
Query: 85 SVL 87
+L
Sbjct: 106 PML 108
>gi|78060315|ref|YP_366890.1| Flp pilus assembly CpaB [Burkholderia sp. 383]
gi|77964865|gb|ABB06246.1| Flp pilus assembly CpaB [Burkholderia sp. 383]
Length = 279
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L S + V + +N GE L +++ + + ++ K + G V R L
Sbjct: 28 LVQTSTSSVTPVAVATTDLNLGEPLGPNQIHMVSWPSGSVPTGAFTDTKGLEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHR 89
+ S L
Sbjct: 88 SRGEPVIESKLAP 100
>gi|84515250|ref|ZP_01002612.1| polysialic acid capsule biosynthesis protein SiaC [Loktanella
vestfoldensis SKA53]
gi|84510533|gb|EAQ06988.1| polysialic acid capsule biosynthesis protein SiaC [Loktanella
vestfoldensis SKA53]
Length = 343
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
VV + AG V+ E+ + + S Y V+G T R L + + S L
Sbjct: 286 VVADRDLPAGHVITEADI-WARRPGSGEIAGY--DFDKVLGRTTTRALPRNTQLKWSDLD 342
>gi|218546633|gb|ACK98963.1| flp pilus assembly protein FlpB [Aeromonas salmonicida subsp.
masoucida]
Length = 91
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS---NIRGNYAHSIKD 66
L+ +S + + +V + + AG ++ L + + N+ G + D
Sbjct: 37 LTSESTASDRVAQVLVAAHRVQAGSFIHPEDLVWQTLPAAEEMNLPGLFLFGFTD 91
>gi|90425196|ref|YP_533566.1| Flp pilus assembly CpaB [Rhodopseudomonas palustris BisB18]
gi|90107210|gb|ABD89247.1| Flp pilus assembly CpaB [Rhodopseudomonas palustris BisB18]
Length = 265
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 16/143 (11%), Positives = 33/143 (23%), Gaps = 15/143 (10%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS------IKDVV 68
+ +V I G+ L ++ + + +V
Sbjct: 31 PPAAPVAQLPTVDVLVAKSDIPLGQALTPGDVQWQVWPAATASEMFIRRNVRPDATTQIV 90
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG----- 123
G + R + I L + G+ + M + I+ + G
Sbjct: 91 GSIARSAFIAGEPIRDLKLVKA----NGSGFMAAILPSGMRAVSTEISPETGAGGFILPN 146
Query: 124 DVIAVKNIDTGVMVSGSVVDTGT 146
D + V G
Sbjct: 147 DRVDVILSKREKNPDARASGDGV 169
>gi|332671590|ref|YP_004454598.1| SAF domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332340628|gb|AEE47211.1| SAF domain protein [Cellulomonas fimi ATCC 484]
Length = 205
Score = 38.0 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 21/71 (29%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
VL VV + + AG L ++ + V A + +V+
Sbjct: 22 VLGTLRPAPPETRPVVVAGLPLVAGTRLTADDVRVVDVPTRLAADGAAARVDEVLDRSLA 81
Query: 74 RVLLPDHVIPL 84
L P +
Sbjct: 82 VDLTPGSPLVP 92
>gi|293394190|ref|ZP_06638490.1| HlyD family secretion protein [Serratia odorifera DSM 4582]
gi|291423168|gb|EFE96397.1| HlyD family secretion protein [Serratia odorifera DSM 4582]
Length = 311
Score = 38.0 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 37/107 (34%), Gaps = 2/107 (1%)
Query: 39 EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK 98
E ++++ V + + + + T D I +H I+RG+
Sbjct: 122 EEIDQANNVLQTVQHQLAKSIAVRDLAKLDLERTTVRAPADGWITNLNVHAGEFITRGST 181
Query: 99 VRIILTQGNMTISTAGI--ALSDASIGDVIAVKNIDTGVMVSGSVVD 143
++ + + L S GD + + + + ++ G+V
Sbjct: 182 AVALVKKNTFYVLAYLEETKLHGLSKGDRVEITPLGSNRIMHGTVDS 228
>gi|283852033|ref|ZP_06369308.1| N-acylneuraminate-9-phosphate synthase [Desulfovibrio sp. FW1012B]
gi|283572583|gb|EFC20568.1| N-acylneuraminate-9-phosphate synthase [Desulfovibrio sp. FW1012B]
Length = 357
Score = 38.0 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 21/67 (31%), Gaps = 4/67 (5%)
Query: 24 VIGHAVVPSVVINAGEVLNESRLK-EMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
V A+ + AG L L+ + + + + ++G R L +
Sbjct: 293 VQRRALRAVRDLPAGHALTPDDLEALRPIPEDGLPP---YELDALLGKTLARALGRGEHL 349
Query: 83 PLSVLHR 89
L R
Sbjct: 350 TRRHLAR 356
>gi|119714038|ref|YP_919180.1| SAF domain-containing protein [Nocardioides sp. JS614]
gi|119525947|gb|ABL79317.1| SAF domain [Nocardioides sp. JS614]
Length = 259
Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 11/109 (10%)
Query: 27 HAVVPSVVINAGEVLNESRLK------EMQVTNSNIRGNYA-HSIKDVVGLVTRRVLLPD 79
+V + I AG + E ++ + + S I G + V G T LLP
Sbjct: 70 EVLVVAQPIPAGHPITEDDVRTSKDPLLVSRSVSGIDGAILVSDVDSVFGQRTTVALLPG 129
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
V+ L + G ++ + T L+ S+ D IAV
Sbjct: 130 QVLTQDSLTSDLLPQEGKRLIAVNLPAGRVPDT----LAPGSVVDAIAV 174
>gi|33596968|ref|NP_884611.1| hypothetical protein BPP2375 [Bordetella parapertussis 12822]
gi|33566419|emb|CAE37672.1| putative membrane protein [Bordetella parapertussis]
Length = 313
Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
VV I AG+ L LK + N + ++G + R+ + +
Sbjct: 48 TYPVVVAGKPIAAGDRLAAELLKIERWPV--QPANGYAESEALLGQMVRQDIPAGEPVTA 105
Query: 85 SVLHR 89
+L R
Sbjct: 106 PMLAR 110
>gi|294678479|ref|YP_003579094.1| sialic acid synthase [Rhodobacter capsulatus SB 1003]
gi|294477299|gb|ADE86687.1| sialic acid synthase [Rhodobacter capsulatus SB 1003]
Length = 342
Score = 38.0 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
VV + AG ++ E+ + + S Y VVG T R L + + S L
Sbjct: 286 VVADRDLPAGHLITEADI-WARRPGSGEIAGY--DFDKVVGKRTTRALPRNTQLKWSDL 341
>gi|77456877|ref|YP_346382.1| Flp pilus assembly CpaB [Pseudomonas fluorescens Pf0-1]
gi|77380880|gb|ABA72393.1| putative Flp pilus assembly protein [Pseudomonas fluorescens Pf0-1]
Length = 312
Score = 37.6 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 33/117 (28%), Gaps = 8/117 (6%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V + + VV I L + + + S+ V+G
Sbjct: 45 VDTPAPVEDPTRQPVVVLVRDIAPFVTLTAADVTVEK--LRTAPAGSLASVDQVIGRTPW 102
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
R L + ++R I + + ++ + + + GD + V
Sbjct: 103 RALSAGTWLTQESFEAGSPLAR----MIRPGERALAVAVDEVINAGGQLAPGDYVDV 155
>gi|116671413|ref|YP_832346.1| hypothetical protein Arth_2867 [Arthrobacter sp. FB24]
gi|116611522|gb|ABK04246.1| hypothetical protein Arth_2867 [Arthrobacter sp. FB24]
Length = 213
Score = 37.6 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 40/131 (30%), Gaps = 28/131 (21%)
Query: 5 RFLLFFSLYVLSLDSL-----FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
R ++ L + ++ + A+ + + AG L+ + + ++V +
Sbjct: 13 RLVVALLLCAAAGIAVQQLTPAPAHTVTALATARDLAAGTALSGNEVVPVKVPPGMVPSG 72
Query: 60 YAHSIKDVVGLVTRRVLLPDHVI-----------------------PLSVLHRPYVISRG 96
+ + G L +I ++ +++ G
Sbjct: 73 AVADVSSIQGKQLAAPLRKGQLISDTQLLGPGLLAGTKPGSAAVPLRMADPSSIQLVAPG 132
Query: 97 AKVRIILTQGN 107
V I++T G
Sbjct: 133 QLVNIVMTNGT 143
>gi|187927688|ref|YP_001898175.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12J]
gi|187724578|gb|ACD25743.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12J]
Length = 283
Score = 37.6 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 34/100 (34%), Gaps = 11/100 (11%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASV-----------IGHAVVPSVVINAGEVLNESRLKEM 49
M R ++ + +++ + S + VV + ++ G+ L +L+ +
Sbjct: 1 MKNARAIVMLIVALVAGIAAVVSASRWLSQQSTSSVKQVVVAASDMDLGQPLGNEQLRTV 60
Query: 50 QVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
++ K + G V R L I + L
Sbjct: 61 SWPAGSLPPGTFDDPKALQGRVVRASLQKGEPILENKLAP 100
>gi|317486066|ref|ZP_07944919.1| NeuB family protein [Bilophila wadsworthia 3_1_6]
gi|316922693|gb|EFV43926.1| NeuB family protein [Bilophila wadsworthia 3_1_6]
Length = 352
Score = 37.6 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
+V + I AG+++++ L + +Y +V+G+ R + D V+ + L
Sbjct: 297 LVANRNIPAGKIIDKDDLTWKRPAGGISPRHYY----EVLGMAARADIEEDTVLQWAHLE 352
>gi|241662166|ref|YP_002980526.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12D]
gi|309780761|ref|ZP_07675502.1| Flp pilus assembly protein CpaB [Ralstonia sp. 5_7_47FAA]
gi|240864193|gb|ACS61854.1| Flp pilus assembly protein CpaB [Ralstonia pickettii 12D]
gi|308920443|gb|EFP66099.1| Flp pilus assembly protein CpaB [Ralstonia sp. 5_7_47FAA]
Length = 283
Score = 37.6 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 23/60 (38%)
Query: 30 VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
V + I+ G+ L+ +K + S++ + + G V R L + S L
Sbjct: 41 VAATDIDLGQRLSPEAIKLVDWPASSLPPGAINDPHALDGRVVRASLTRGEPVLDSKLTP 100
>gi|218546639|gb|ACK98965.1| flp pilus assembly protein FlpB [Aeromonas hydrophila]
Length = 90
Score = 37.6 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 6/54 (11%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS---NIRGNYAHSIK 65
+ + ++ + +V + + AG ++ L + + N+ G +
Sbjct: 37 QAPEPAASARLAQVLVAAHRVQAGAFIHPEDLVWQTLPAAEEMNLPGLFLFGFT 90
>gi|254255253|ref|ZP_04948569.1| Flp pilus assembly protein CpaB [Burkholderia dolosa AUO158]
gi|124900990|gb|EAY71740.1| Flp pilus assembly protein CpaB [Burkholderia dolosa AUO158]
Length = 323
Score = 37.6 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L S + V + +N GE L +++ + + ++ K + G V R L
Sbjct: 70 LVQTSTSAVTSVAVAATDLNLGEPLGANQIHMVSWPSGSVPTGAFTDTKALEGRVVRTSL 129
Query: 77 LPDHVIPLSVLHR 89
+ S L
Sbjct: 130 ARGEPVIESKLAP 142
>gi|295396211|ref|ZP_06806393.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
49030]
gi|294970999|gb|EFG46892.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
49030]
Length = 173
Score = 37.6 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 18/63 (28%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV I+ G V+ + I N VVG + L + +
Sbjct: 11 RIVVAHTRIDPGTVITARLVTTRVFPPQLIPENAVTDPAQVVGTTSASSLDAGTPVTTTA 70
Query: 87 LHR 89
L
Sbjct: 71 LLE 73
>gi|315501061|ref|YP_004079948.1| saf domain protein [Micromonospora sp. L5]
gi|315407680|gb|ADU05797.1| SAF domain protein [Micromonospora sp. L5]
Length = 222
Score = 37.6 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDVVGLVTR 73
+ G + + ++ G L L ++V+ ++ A + +V+GL
Sbjct: 46 AAFAVTSVRSTGTYLAVARPVDVGHQLTADDLVPVRVSGGRELQPVPADRMDEVLGLRAA 105
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAK 98
L P ++ + L ++ G +
Sbjct: 106 VRLTPGTLLTPAQLTEAPLLGPGQQ 130
>gi|260892668|ref|YP_003238765.1| SAF domain protein [Ammonifex degensii KC4]
gi|260864809|gb|ACX51915.1| SAF domain protein [Ammonifex degensii KC4]
Length = 221
Score = 37.6 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ F + L V + A VV + G V+ + + + +
Sbjct: 24 LMSALFGVAAGLAVWFALQV-ARPTVPVVVALRDMQVGHVVRPDEVAVRKYPPVAVPPDA 82
Query: 61 AHSIKDVVGLVTR 73
++ VG
Sbjct: 83 VRKPEEAVGKTVT 95
>gi|121607247|ref|YP_995054.1| SAF domain-containing protein [Verminephrobacter eiseniae EF01-2]
gi|121551887|gb|ABM56036.1| SAF domain [Verminephrobacter eiseniae EF01-2]
Length = 306
Score = 37.6 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 33/99 (33%), Gaps = 4/99 (4%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLV 71
V ++++ +V + G++L + ++ N + + G
Sbjct: 42 VAAIEARSKKETIALLVAKRELKKGDLLATGNVAVREIPLDYAHSNAIAPEHFERIEGQG 101
Query: 72 TRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTI 110
L ++ S++ + RI + + +T+
Sbjct: 102 IEHGLKAGEMLLWSLMQTRKAATF--SARIEIGRRAITV 138
>gi|257784838|ref|YP_003180055.1| SAF domain-containing protein [Atopobium parvulum DSM 20469]
gi|257473345|gb|ACV51464.1| SAF domain protein [Atopobium parvulum DSM 20469]
Length = 275
Score = 37.6 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 23/71 (32%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
+ + +V + I GE L+ S + + I + + V+G V+
Sbjct: 40 IQKYGGELTSILVATKQIEPGETLSSSNTQVKSWISDLIPEGAITNPESVMGRTVSSVIG 99
Query: 78 PDHVIPLSVLH 88
+ L
Sbjct: 100 VGMPVVSLHLR 110
>gi|227548266|ref|ZP_03978315.1| SAF domain protein [Corynebacterium lipophiloflavum DSM 44291]
gi|227079584|gb|EEI17547.1| SAF domain protein [Corynebacterium lipophiloflavum DSM 44291]
Length = 206
Score = 37.6 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Query: 19 SLFASVIGHAVVPS--VVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
S S +V + +AG+VL S L+ + + N I G +
Sbjct: 37 SAAVSRGADPMVLAFAQPASAGDVLEPSHLQLRRFPADAVPDNALTDIDAATGQILAAAA 96
Query: 77 LPDHVIPLS 85
V+ +
Sbjct: 97 SRGEVVTST 105
>gi|167574002|ref|ZP_02366876.1| putative pilus assembly protein CpaB [Burkholderia oklahomensis
C6786]
Length = 282
Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 30/73 (41%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +S + V ++ +N GE L ++L+ + +++ +K + G V R L
Sbjct: 28 LVQTSSSAVTPVAVAAIDVNLGEPLVPNQLRVVNWPTASVPPGAFTDVKSLEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHR 89
+ S L
Sbjct: 88 ARGEPVLGSKLAP 100
>gi|256372256|ref|YP_003110080.1| hypothetical protein Afer_1484 [Acidimicrobium ferrooxidans DSM
10331]
gi|256008840|gb|ACU54407.1| hypothetical protein Afer_1484 [Acidimicrobium ferrooxidans DSM
10331]
Length = 231
Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 9/98 (9%)
Query: 2 DCVRFLLFFSLYVLSLDSLFA-------SVIGHAVVPSVVINAGEVLNESRLKEMQVTNS 54
V + ++ + + +L S VV + + GEV +S L V
Sbjct: 8 RSVALKIAGTVALGAAVTLGVYSFFSKQSQTVDIVVAAKPLVPGEVPTKSDLAVEAVPQQ 67
Query: 55 NIRGN--YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
++ +++ + V + + + +S L
Sbjct: 68 SVTPGMIPVANVRVLNNQVVTTTIPQNAPVLVSELAPH 105
>gi|257790303|ref|YP_003180909.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243]
gi|325830168|ref|ZP_08163625.1| Flp pilus assembly protein CpaB [Eggerthella sp. HGA1]
gi|257474200|gb|ACV54520.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243]
gi|325487635|gb|EGC90073.1| Flp pilus assembly protein CpaB [Eggerthella sp. HGA1]
Length = 215
Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 6/98 (6%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI---P 83
V I AGE ++ S ++ + S DVVG +L V+
Sbjct: 49 EVCVAKRDIAAGESVDASAVETRLWVADLLPAEAFRSSDDVVGKKASSTILAGEVLSERR 108
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+ G + + + G A++ S
Sbjct: 109 FRDAGSRLDVPEGLTALSVPAKD---VQAVGGAVAAGS 143
>gi|255327311|ref|ZP_05368385.1| N-acylneuraminate-9-phosphate synthase [Rothia mucilaginosa ATCC
25296]
gi|283458602|ref|YP_003363235.1| sialic acid synthase [Rothia mucilaginosa DY-18]
gi|255295591|gb|EET74934.1| N-acylneuraminate-9-phosphate synthase [Rothia mucilaginosa ATCC
25296]
gi|283134650|dbj|BAI65415.1| sialic acid synthase [Rothia mucilaginosa DY-18]
Length = 747
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
+V + I GEV+ E+ + ++ NY ++G +R + L
Sbjct: 405 LVATRHIAKGEVVTEADVAVKS-PGRGLQPNYL---PQLLGRTMQRDVEEGSFFFEGDLK 460
Query: 89 RPYVISRG 96
V R
Sbjct: 461 DDLVTRRD 468
>gi|167566933|ref|ZP_02359849.1| putative pilus assembly protein CpaB [Burkholderia oklahomensis
EO147]
Length = 274
Score = 37.6 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 30/73 (41%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L +S + V ++ +N GE L ++L+ + +++ +K + G V R L
Sbjct: 20 LVQTSSSAVTPVAVAAIDVNLGEPLVPNQLRVVNWPTASVPPGAFTDVKSLEGRVVRTSL 79
Query: 77 LPDHVIPLSVLHR 89
+ S L
Sbjct: 80 ARGEPVLGSKLAP 92
>gi|20559814|gb|AAM27589.1|AF498403_8 ORF_8; similar to NeuB family [Pseudomonas aeruginosa]
Length = 361
Score = 37.6 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
VV + I AG ++ L + + G S+ ++VG ++R L +
Sbjct: 310 VVAARDIEAGMIITRDDLTTAR----SGHGLPPTSLWELVGSTSKRAFLAGETL 359
>gi|103486618|ref|YP_616179.1| Flp pilus assembly CpaB [Sphingopyxis alaskensis RB2256]
gi|98976695|gb|ABF52846.1| Flp pilus assembly CpaB [Sphingopyxis alaskensis RB2256]
Length = 345
Score = 37.6 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 32/122 (26%), Gaps = 16/122 (13%)
Query: 23 SVIGH-AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLL 77
+ G +V + + G ++ + + Y + +VG V R +
Sbjct: 42 EITGPMILVATRQLPVGTIVGPDSFRFQPWPKDLVENAYFVKEKTDVNTLVGTVVRHPIT 101
Query: 78 PDHVIPLSVLHRPYVISRGAK-VRIILTQGNMTISTAGIALSDASI-----GDVIAVKNI 131
+ ++ + M T ++ GD + V
Sbjct: 102 AGQPLTQ-----GALVHPNDRGFLAAALGPGMRAITVKVSQEQGVAGFVFPGDRVDVVLT 156
Query: 132 DT 133
T
Sbjct: 157 QT 158
>gi|218887828|ref|YP_002437149.1| Flp pilus assembly protein CpaB [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758782|gb|ACL09681.1| Flp pilus assembly protein CpaB [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 274
Score = 37.6 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 25/98 (25%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ + A V + + G L ++K S+ VG V
Sbjct: 31 RAAAPQMAAPEQVELAVAAADVPRGAKLAAEQIKLAPFLKSSAPSGAFTKDTLPVGRVLS 90
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIS 111
+ I + L + G I + +
Sbjct: 91 SAVAAGEPITEARLLQDGASHGGVSTLIAPGMRAVAVK 128
>gi|86159250|ref|YP_466035.1| Flp pilus assembly CpaB [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775761|gb|ABC82598.1| Flp pilus assembly CpaB [Anaeromyxobacter dehalogenans 2CP-C]
Length = 307
Score = 37.6 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 26/73 (35%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
YV + + VV ++ + L L +Q ++N+ A +V V
Sbjct: 47 YVETRTAAARVSTTPVVVATIDLPEATTLRADVLTVVQWPSANVPEGAASDPAKLVDRVV 106
Query: 73 RRVLLPDHVIPLS 85
R ++ + S
Sbjct: 107 RARVIKGEPVIES 119
>gi|62389769|ref|YP_225171.1| hypothetical protein cg1002 [Corynebacterium glutamicum ATCC 13032]
gi|21323646|dbj|BAB98273.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41325104|emb|CAF19585.1| putative secreted protein [Corynebacterium glutamicum ATCC 13032]
Length = 217
Score = 37.2 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
AVV I AG + S L + S + SI DVVGLV L +
Sbjct: 44 TAVVIVQEIPAGTKVEASDLGLQAIPTSLLPSTSYDSIDDVVGLVAASTLSSGEIATKPR 103
Query: 87 LHRPYVISRGAKVRIILTQGNM-TISTAGIALSDASI------GDVIAV 128
+I + + + I+ ++L++ S+ GD I+V
Sbjct: 104 FVGTELI--NSIATNVTDSSLVEEINMVPLSLAEPSVIPLLQHGDTISV 150
>gi|319779650|ref|YP_004130563.1| SAF domain protein [Taylorella equigenitalis MCE9]
gi|317109674|gb|ADU92420.1| SAF domain protein [Taylorella equigenitalis MCE9]
Length = 325
Score = 37.2 bits (85), Expect = 0.66, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 38/121 (31%), Gaps = 18/121 (14%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLP 78
V+ +V + I G +++ S L + + + + + + G + L
Sbjct: 40 HRQVMIPRIVAAGDIPEGTIIDSSILAVRDIPENWVSSDSLSPDEFERIEGKIITSPLTA 99
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVS 138
+ + KV + G ++ D I N +G++V
Sbjct: 100 GDPVLWAHTSTVSRRPFSEKVAV----GRRAVTMPV---------DTI---NSVSGLIVP 143
Query: 139 G 139
G
Sbjct: 144 G 144
>gi|229194284|ref|ZP_04321123.1| hypothetical protein bcere0002_58680 [Bacillus cereus ATCC 10876]
gi|228589183|gb|EEK47163.1| hypothetical protein bcere0002_58680 [Bacillus cereus ATCC 10876]
Length = 286
Score = 37.2 bits (85), Expect = 0.67, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N S K+V+G T
Sbjct: 41 VVVAAKDIPAHTEIKEEMLVERTLPGDGIPPNALRVSKKEVIGKWTNDGQPITEN 95
>gi|309811232|ref|ZP_07705024.1| SAF domain protein [Dermacoccus sp. Ellin185]
gi|308434844|gb|EFP58684.1| SAF domain protein [Dermacoccus sp. Ellin185]
Length = 760
Score = 37.2 bits (85), Expect = 0.68, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
+V + I AGE L + + ++ +VG RR + + L
Sbjct: 408 LVATRDIAAGEKLTRADVTIKSPGRGLQPN----RLEALVGRTMRRPIESGDFFYATDLT 463
Query: 89 R 89
Sbjct: 464 D 464
>gi|229819753|ref|YP_002881279.1| SAF domain protein [Beutenbergia cavernae DSM 12333]
gi|229565666|gb|ACQ79517.1| SAF domain protein [Beutenbergia cavernae DSM 12333]
Length = 219
Score = 37.2 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 31/104 (29%), Gaps = 1/104 (0%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
L+ S+ + + A + + G+ L+ L Q+ G Y +
Sbjct: 33 LLVAASVALGTWAVQAADESVAVYAATDDLAPGDRLDADDLTVRQIRWDGEGGTYLLAED 92
Query: 66 DV-VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNM 108
V +V R + ++P S + + +
Sbjct: 93 GVPDDVVVTRPVGAGELVPSSATGPADAVDTRPVAMPVPAGSGI 136
>gi|264680619|ref|YP_003280529.1| signal peptide protein, CpaB like protein [Comamonas testosteroni
CNB-2]
gi|262211135|gb|ACY35233.1| putative signal peptide protein, CpaB like protein [Comamonas
testosteroni CNB-2]
Length = 329
Score = 37.2 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 4/85 (4%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
V+ S I AG+VL L+ +Q+ I I+ VG V + + +
Sbjct: 52 VVMASQPIPAGQVLKAEDLQVLQLPA--IPDGAYSEIQAAVGSVPAVDIPKGAPVLQGQM 109
Query: 88 HRPYV--ISRGAKVRIILTQGNMTI 110
+S G + + N+ +
Sbjct: 110 VTGLALKVSEGERAVAVKVDENIGV 134
>gi|228912580|ref|ZP_04076242.1| hypothetical protein bthur0013_66390 [Bacillus thuringiensis IBL
200]
gi|228847049|gb|EEM92041.1| hypothetical protein bthur0013_66390 [Bacillus thuringiensis IBL
200]
Length = 286
Score = 37.2 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N S K+V+G T
Sbjct: 41 VVVAAKDIPAHTEIKEEMLVERTLPGDGIPPNALRVSKKEVIGKWTNDGQPITEN 95
>gi|229182299|ref|ZP_04309574.1| hypothetical protein bcere0005_56080 [Bacillus cereus 172560W]
gi|228601155|gb|EEK58701.1| hypothetical protein bcere0005_56080 [Bacillus cereus 172560W]
Length = 286
Score = 37.2 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N S K+V+G T
Sbjct: 41 VVVAAKDIPAHTEIKEEMLVERTLPGDGIPPNALRVSKKEVIGKWTNDGQPITEN 95
>gi|332188388|ref|ZP_08390113.1| flp pilus assembly protein CpaB [Sphingomonas sp. S17]
gi|332011617|gb|EGI53697.1| flp pilus assembly protein CpaB [Sphingomonas sp. S17]
Length = 329
Score = 37.2 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 10/102 (9%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH----SIKDVVGLVTRRVLLPDHVI 82
+V + + G +++ + LK + G Y + + G V R + +
Sbjct: 50 EVLVATRALPVGTIIDATALKFQPWPKEMVGGAYYLKGQADLAKLQGTVVRYAITAGQPL 109
Query: 83 PLSVLHRPYVISRGAK-VRIILTQGNMTISTAGIALSDASIG 123
V+ G + M T ++ G
Sbjct: 110 TQ-----GAVVQPGDRGFLAAALTPGMRAVTVPVSAQTGVAG 146
>gi|239817411|ref|YP_002946321.1| Flp pilus assembly protein CpaB [Variovorax paradoxus S110]
gi|239803988|gb|ACS21055.1| Flp pilus assembly protein CpaB [Variovorax paradoxus S110]
Length = 331
Score = 37.2 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
VV + + AG+ + L+ ++T + + G V L +
Sbjct: 52 TYPVVVAAKPLPAGQAIPADALRVERLTVN--PAGAFQEVATATGRVPVIDLSEGSPLMD 109
Query: 85 SVLHRPYVISRGA 97
+ L + G
Sbjct: 110 NQLVSGLALRVGE 122
>gi|46580523|ref|YP_011331.1| hypothetical protein DVU2118 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449942|gb|AAS96591.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234262|gb|ADP87116.1| Flp pilus assembly protein CpaB [Desulfovibrio vulgaris RCH1]
Length = 272
Score = 37.2 bits (85), Expect = 0.74, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 28/83 (33%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
VV +V + G + +LK +++ K +VG V + VI + L
Sbjct: 45 VVAAVDMEKGAKIRADQLKTSTFLSASAPPGGFTDAKSLVGRVLATPVTTGEVITETRLL 104
Query: 89 RPYVISRGAKVRIILTQGNMTIS 111
S G I + +
Sbjct: 105 PADATSGGVSTMIAPGMRAVAVK 127
>gi|238754638|ref|ZP_04615991.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Yersinia ruckeri
ATCC 29473]
gi|238707097|gb|EEP99461.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Yersinia ruckeri
ATCC 29473]
Length = 311
Score = 37.2 bits (85), Expect = 0.74, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 36/107 (33%), Gaps = 2/107 (1%)
Query: 39 EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK 98
E + +S V + + A + + T + +H I+RG+
Sbjct: 122 EEIEQSTNVLQTVRHQLAKAIAARELAKLDLQRTTVRAPAQGWVTNLNIHTGEFINRGST 181
Query: 99 VRIILTQGNMTISTAGI--ALSDASIGDVIAVKNIDTGVMVSGSVVD 143
V ++ + I L GD + + + + ++ G+V
Sbjct: 182 VVALVKKNTFYILAYLEETKLEGVGQGDRVEITPLGSNRILHGTVDS 228
>gi|197106458|ref|YP_002131835.1| pilus assembly protein CpaB [Phenylobacterium zucineum HLK1]
gi|196479878|gb|ACG79406.1| pilus assembly protein CpaB [Phenylobacterium zucineum HLK1]
Length = 287
Score = 37.2 bits (85), Expect = 0.74, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 4/63 (6%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS----IKDVVGLVTRRVLLPDHVI 82
+V + + G +L S ++ Y S + G V R L P +
Sbjct: 51 QVLVAAQALPPGTILKPSHVRWQAWPADAPTAGYLTSAASGPAQIAGAVVRGELQPGQPL 110
Query: 83 PLS 85
+
Sbjct: 111 TTT 113
>gi|323497096|ref|ZP_08102119.1| Sialic acid synthase [Vibrio sinaloensis DSM 21326]
gi|323317940|gb|EGA70928.1| Sialic acid synthase [Vibrio sinaloensis DSM 21326]
Length = 343
Score = 37.2 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 6 FLLFFSL--YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
F S V + + +VV + ++ G+VL + + + + + +
Sbjct: 263 FNALGSFERVVSQEEYAQRENMRRSVVSARQLSKGDVLTLTDIVLKR-PGTGVPAD---R 318
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLH 88
+ V+G V + + D VI LS L
Sbjct: 319 YESVIGKVVTQDIAADQVIDLSALK 343
>gi|163851902|ref|YP_001639945.1| Flp pilus assembly protein CpaB [Methylobacterium extorquens PA1]
gi|254561620|ref|YP_003068715.1| pilus assembly protein cpaB [Methylobacterium extorquens DM4]
gi|163663507|gb|ABY30874.1| Flp pilus assembly protein CpaB [Methylobacterium extorquens PA1]
gi|254268898|emb|CAX24859.1| pilus assembly protein cpaB [Methylobacterium extorquens DM4]
Length = 261
Score = 37.2 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 37/118 (31%), Gaps = 8/118 (6%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS------IKDVVGLVT 72
+ + +V + + G+ L L+ + I ++D VG +
Sbjct: 40 PVAPVPMSEVLVAAAELPMGQTLKPEDLRWIAWPEQAISPGLIERRAAPKGLEDSVGAII 99
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
R + I L + A + + +T T G + + + D + V
Sbjct: 100 RTGFSANEPIRPERLVKAGSGFMSAILPPGMRAVAITTDTRGSSSAGGFVLPNDHVDV 157
>gi|320533999|ref|ZP_08034557.1| SAF domain protein [Actinomyces sp. oral taxon 171 str. F0337]
gi|320133787|gb|EFW26177.1| SAF domain protein [Actinomyces sp. oral taxon 171 str. F0337]
Length = 235
Score = 37.2 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 39/123 (31%), Gaps = 10/123 (8%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
+ I AG+V+++ L V++ A I VVG R + ++ S
Sbjct: 70 AQMLAAKDTIKAGQVIDKEDLVSASVSSDLTTLVRADQIDQVVGRTARVEISKGQLLDTS 129
Query: 86 VLHRPYVISRG-AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMV--SGSVV 142
L V V + G GD + V +I + ++ V+
Sbjct: 130 QLATDPVPGGDLQVVGVSANAGRFPAGGL-------QPGDKVDVVDIGSQNVIVSDAQVL 182
Query: 143 DTG 145
Sbjct: 183 AAK 185
>gi|19552105|ref|NP_600107.1| hypothetical protein NCgl0844 [Corynebacterium glutamicum ATCC
13032]
Length = 184
Score = 37.2 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
AVV I AG + S L + S + SI DVVGLV L +
Sbjct: 11 TAVVIVQEIPAGTKVEASDLGLQAIPTSLLPSTSYDSIDDVVGLVAASTLSSGEIATKPR 70
Query: 87 LHRPYVISRGAKVRIILTQGNM-TISTAGIALSDASI------GDVIAV 128
+I + + + I+ ++L++ S+ GD I+V
Sbjct: 71 FVGTELI--NSIATNVTDSSLVEEINMVPLSLAEPSVIPLLQHGDTISV 117
>gi|148261012|ref|YP_001235139.1| SAF domain-containing protein [Acidiphilium cryptum JF-5]
gi|326404412|ref|YP_004284494.1| putative pilus assembly protein [Acidiphilium multivorum AIU301]
gi|146402693|gb|ABQ31220.1| SAF domain protein [Acidiphilium cryptum JF-5]
gi|325051274|dbj|BAJ81612.1| putative pilus assembly protein [Acidiphilium multivorum AIU301]
Length = 275
Score = 37.2 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 12/118 (10%), Positives = 29/118 (24%), Gaps = 4/118 (3%)
Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
+ + S A + + + G +L + S + +
Sbjct: 21 VAWLDMHPSHPHAKAPKMVALLATGRPLAPGTLLQPADFVAENRPPSKVPADAVPDT--P 78
Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISR--GAKVRIILTQGNMTISTAGIALSDASIG 123
+ H + L ++ R + Q M + G+ + G
Sbjct: 79 ANRAAYTGAMVRHRLSAGDLLATDIVIRPGDHGFLAAVLQPGMRAVSVGVDAITGAAG 136
>gi|126735047|ref|ZP_01750793.1| N-acylneuraminate-9-phosphate synthase [Roseobacter sp. CCS2]
gi|126715602|gb|EBA12467.1| N-acylneuraminate-9-phosphate synthase [Roseobacter sp. CCS2]
Length = 343
Score = 37.2 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
VV + AG V+ E+ + + S Y V+G + + + + + L
Sbjct: 286 VVADRDLPAGHVITEADI-WARRPGSGEIAGY--DFDKVLGKTLKAAVTRNTQLKWTDLD 342
>gi|189234957|ref|XP_973182.2| PREDICTED: similar to CG17754 CG17754-PC [Tribolium castaneum]
Length = 886
Score = 37.2 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 14/121 (11%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+G ++V + + G++L +K I + V+G + V+ D I
Sbjct: 290 LGKSLVAATTLRKGDILQHENIKIKVAEPKGIDASLLKD---VIGKHVKGVINEDESILQ 346
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA----SIGDVIAVKNIDTGVMVSGS 140
L + ++ + G ++GDV G ++
Sbjct: 347 ENLDNNGKKVQAHRLVLSAASEYFAAMFTGNLRESGESEITLGDV-------NGDVLQAV 399
Query: 141 V 141
V
Sbjct: 400 V 400
>gi|39937141|ref|NP_949417.1| Flp pilus assembly CpaB [Rhodopseudomonas palustris CGA009]
gi|39650999|emb|CAE29522.1| possible pilus assembly protein cpaB [Rhodopseudomonas palustris
CGA009]
Length = 270
Score = 37.2 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 7/65 (10%), Positives = 19/65 (29%), Gaps = 6/65 (9%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI------KDVVGLVTRRVLLP 78
+V I G+++ S ++ + ++ + G + R +
Sbjct: 45 TVDVLVAKSNIALGQLVTPSDVRWQSWPADSASEHFLRRDKMPNTEAFLAGTIARSPFVA 104
Query: 79 DHVIP 83
I
Sbjct: 105 GEPIR 109
>gi|126461332|ref|YP_001042446.1| putative Flp pilus assembly protein CpaB [Rhodobacter sphaeroides
ATCC 17029]
gi|126102996|gb|ABN75674.1| putative Flp pilus assembly protein CpaB [Rhodobacter sphaeroides
ATCC 17029]
Length = 274
Score = 37.2 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 31/113 (27%), Gaps = 4/113 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV--VGLVTRRVLLPDHVI 82
+ V + +N G L + ++ + + + D+ R VL
Sbjct: 47 MVEVFVTNKPLNYGAPLTRADVRTIMWPANALPETIFQKESDLFPDPAKPRYVLRQMEKF 106
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAVKNIDT 133
+ + A +R+ I + GD + V +
Sbjct: 107 EPVLGVKVTAPGIEAGIRLASGMRAFAIKVDVASGVSGFLQPGDRVDVYWTGS 159
>gi|166033613|ref|ZP_02236442.1| hypothetical protein DORFOR_03339 [Dorea formicigenerans ATCC
27755]
gi|166026798|gb|EDR45555.1| hypothetical protein DORFOR_03339 [Dorea formicigenerans ATCC
27755]
Length = 700
Score = 36.9 bits (84), Expect = 0.84, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 61/169 (36%), Gaps = 28/169 (16%)
Query: 12 LYVLSLDSLFASVIGHA---VVPSVVINAGEV----LNESRLKEMQVTNSNIRGN---YA 61
L++ + + + + G++ L+ + + +
Sbjct: 109 LFLPYSVRACITAVKSVKYLWMGVRTLAKGKIEVPVLDATAIGVSMFRGDIATAGSVMFL 168
Query: 62 HSIKD-VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI----ILTQGNMTIST---- 112
I + + ++ + + + +++S G +V + + + + I
Sbjct: 169 LGIGEILEEWTHKKSVGDLARSMSLNISKVWLVSDGQEVLVPFSSVKSGDRIRIHMGNVI 228
Query: 113 -------AGIALSDASI--GDVIAVKNIDTGVMVSGSVVDTGTVRVVVK 152
G A+ + + G+ +AV+ I+ G + +G+VV+ G + + V+
Sbjct: 229 PFDGTVVEGEAMVNQASLTGESVAVRKIENGEVYAGTVVEEGELTIRVR 277
>gi|28899194|ref|NP_798799.1| putative pilus assembly protein [Vibrio parahaemolyticus RIMD
2210633]
gi|153836767|ref|ZP_01989434.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AQ3810]
gi|260361568|ref|ZP_05774595.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus K5030]
gi|260876725|ref|ZP_05889080.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AN-5034]
gi|260898196|ref|ZP_05906692.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus Peru-466]
gi|260900396|ref|ZP_05908791.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AQ4037]
gi|28807418|dbj|BAC60683.1| putative pilus assembly protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149749913|gb|EDM60658.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AQ3810]
gi|308089099|gb|EFO38794.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus Peru-466]
gi|308091466|gb|EFO41161.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AN-5034]
gi|308109142|gb|EFO46682.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus AQ4037]
gi|308114026|gb|EFO51566.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus K5030]
gi|328474269|gb|EGF45074.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus 10329]
Length = 251
Score = 36.9 bits (84), Expect = 0.84, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 24/64 (37%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV ++ + G +L+E L + I + +G + + ++ +
Sbjct: 45 PVVVATMELEPGTILDEKHLTTKLMEVDWIDDETLKVPEQALGRIVANTIYAGELVNPNR 104
Query: 87 LHRP 90
L +P
Sbjct: 105 LAQP 108
>gi|306835635|ref|ZP_07468644.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304568479|gb|EFM44035.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length = 241
Score = 36.9 bits (84), Expect = 0.85, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS-IKDVVGLVTRRVLLPD 79
A + +V S + AG L+ + + ++ +S+I + D+ G +
Sbjct: 46 RAKELPQVLVFSHDLPAGAELSAADVSLERLPSSSIPSSALADAPSDLAGRIITAAAGKG 105
Query: 80 HVIPLSVLHRPYVI 93
V+ L ++
Sbjct: 106 EVVTSQRLLGQELV 119
>gi|184200536|ref|YP_001854743.1| hypothetical protein KRH_08900 [Kocuria rhizophila DC2201]
gi|183580766|dbj|BAG29237.1| hypothetical protein [Kocuria rhizophila DC2201]
Length = 224
Score = 36.9 bits (84), Expect = 0.85, Method: Composition-based stats.
Identities = 7/87 (8%), Positives = 20/87 (22%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
+ + + G+ + L + + + G Y + + +
Sbjct: 50 ATTNRSEPYYAAAEDLAVGQRITPEDLTTVDAHLAQVAGGYVPGGQPLQENAVVTQRVAR 109
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQG 106
+ + V I L
Sbjct: 110 GQLVPAASIGTADALDRTPVGIALQTP 136
>gi|146351302|ref|YP_001210529.1| hypothetical protein pAL1.082 [Arthrobacter nitroguajacolicus]
gi|146218866|emb|CAL09937.1| putative membrane protein [Arthrobacter nitroguajacolicus]
Length = 238
Score = 36.9 bits (84), Expect = 0.86, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 30/143 (20%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
S I G ++ S L +Q+ + I A + DV+G + ++ +
Sbjct: 76 TVFSASKDITRGAIVQASDLTTVQIPANQPIPALSASNASDVIGKTAAVDIPQGTLLSQN 135
Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI-------GDVIAVKNI------- 131
+ G S GI+L+ A + GD + + +
Sbjct: 136 NTTSDTGLQAGN-------------SIVGISLTSAQLPPYPLKAGDQVRIVDTPINQGEP 182
Query: 132 --DTGVMVSGSVVDTGTVRVVVK 152
+T + +V+ + T V K
Sbjct: 183 PKETPNSIKATVITSKTDSVSGK 205
>gi|315656141|ref|ZP_07909032.1| hypothetical protein HMPREF0576_0073 [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315493143|gb|EFU82743.1| hypothetical protein HMPREF0576_0073 [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 211
Score = 36.9 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 1/92 (1%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
V ++ + V+ + + + G +V + AG + ++ + G Y
Sbjct: 22 VALMILAVILVIMTVRVASHLEG-YLVAKTTLVAGHTVQSGDIEVISANPGRAAGQYLRE 80
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISR 95
+ G V + + +IP + L + +
Sbjct: 81 GEIQEGSVVVQTIAGGQLIPKASLSQTEPFRK 112
>gi|192292976|ref|YP_001993581.1| Flp pilus assembly protein CpaB [Rhodopseudomonas palustris TIE-1]
gi|192286725|gb|ACF03106.1| Flp pilus assembly protein CpaB [Rhodopseudomonas palustris TIE-1]
Length = 270
Score = 36.9 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 7/65 (10%), Positives = 19/65 (29%), Gaps = 6/65 (9%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI------KDVVGLVTRRVLLP 78
+V I G+++ S ++ + ++ + G + R +
Sbjct: 45 TVDVLVAKSNIALGQLVTPSDVRWQSWPADSASEHFLRRDKMPNTEAFLAGTIARSPFVA 104
Query: 79 DHVIP 83
I
Sbjct: 105 GEPIR 109
>gi|303325648|ref|ZP_07356091.1| NeuB family protein [Desulfovibrio sp. 3_1_syn3]
gi|302863564|gb|EFL86495.1| NeuB family protein [Desulfovibrio sp. 3_1_syn3]
Length = 353
Score = 36.9 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ + + ++V + + AG+ L + L + + NY +V+GL
Sbjct: 281 ALPAEEPARQHA-RRSLVTTRAVPAGQALTPADLTWKRPAHGISPRNY----DEVLGLRA 335
Query: 73 RRVLLPDHVIPLSVLHR 89
RR L D V+ + L R
Sbjct: 336 RRDLPEDTVLTWADLDR 352
>gi|256826164|ref|YP_003150124.1| SAF domain-containing protein [Kytococcus sedentarius DSM 20547]
gi|256689557|gb|ACV07359.1| SAF domain-containing protein [Kytococcus sedentarius DSM 20547]
Length = 218
Score = 36.9 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
V +V I G L L+ +++ + S++++ G L P +
Sbjct: 52 PVTTEVLVADAEIAPGTTLTAEHLRTIELPEGAAAWDA-GSVEELTGRTVTIPLAPGDPV 110
Query: 83 PLSVLHR 89
+
Sbjct: 111 TPRSVLP 117
>gi|218530653|ref|YP_002421469.1| Flp pilus assembly protein CpaB [Methylobacterium chloromethanicum
CM4]
gi|218522956|gb|ACK83541.1| Flp pilus assembly protein CpaB [Methylobacterium chloromethanicum
CM4]
Length = 261
Score = 36.9 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 37/118 (31%), Gaps = 8/118 (6%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS------IKDVVGLVT 72
+ + +V + + G+ L L+ + I ++D VG +
Sbjct: 40 PVAPVPMSEVLVAAAELPMGQTLKPEDLRWLAWPEQAISPGLIERRAAPKGLEDAVGAII 99
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
R + I L + A + + +T T G + + + D + V
Sbjct: 100 RTGFSANEPIRPERLVKAGSGFMSAILPPGMRAVAITTDTRGSSSAGGFVLPNDHVDV 157
>gi|118589702|ref|ZP_01547107.1| Flp pilus assembly CpaB [Stappia aggregata IAM 12614]
gi|118437788|gb|EAV44424.1| Flp pilus assembly CpaB [Stappia aggregata IAM 12614]
Length = 256
Score = 36.9 bits (84), Expect = 0.89, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 30/122 (24%), Gaps = 12/122 (9%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI------KDVVG 69
+ +V I G L+ + + ++ G
Sbjct: 36 VQAPVAEQTKTQVLVAQRDIPLGAKLSPDDMSWANWPEDAVPFGAVTKEAAPLANEEYAG 95
Query: 70 LVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQ-GNMTISTAGIALSDASI--GDVI 126
+ R + + L +G I+ + +S + I GD +
Sbjct: 96 RIARAPIFAGEPVRPERLINT---DKGFMAAILPKGKRAIAVSVEEETSAGGFILPGDKV 152
Query: 127 AV 128
V
Sbjct: 153 DV 154
>gi|77462454|ref|YP_351958.1| putative Flp pilus assembly protein CpaB [Rhodobacter sphaeroides
2.4.1]
gi|221638317|ref|YP_002524579.1| Flp pilus assembly protein CpaB [Rhodobacter sphaeroides KD131]
gi|332560338|ref|ZP_08414660.1| Flp pilus assembly protein CpaB [Rhodobacter sphaeroides WS8N]
gi|77386872|gb|ABA78057.1| Putative Flp pilus assembly protein CpaB [Rhodobacter sphaeroides
2.4.1]
gi|221159098|gb|ACM00078.1| Flp pilus assembly protein CpaB precursor [Rhodobacter sphaeroides
KD131]
gi|332278050|gb|EGJ23365.1| Flp pilus assembly protein CpaB [Rhodobacter sphaeroides WS8N]
Length = 274
Score = 36.9 bits (84), Expect = 0.89, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 31/113 (27%), Gaps = 4/113 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV--VGLVTRRVLLPDHVI 82
+ V + +N G L + ++ + + + D+ R VL
Sbjct: 47 MVEVFVTNKPLNYGAPLTRADVRTIMWPANALPETIFQKESDLFPDPAKPRYVLRQMEKF 106
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAVKNIDT 133
+ + A +R+ I + GD + V +
Sbjct: 107 EPVLGVKVTAPGIEAGIRLASGMRAFAIKVDVASGVSGFLQPGDRVDVYWTGS 159
>gi|310830505|ref|YP_003965606.1| hypothetical protein PPSC2_p0144 [Paenibacillus polymyxa SC2]
gi|309249972|gb|ADO59538.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
Length = 273
Score = 36.9 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 21/63 (33%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
V + +N + + +KE+ V S + ++A K + + I +
Sbjct: 36 VYVFNKDLNVNHQITAADIKEVSVPQSGVTQDFALEPKQFLNKYVGTEVYAGSFIYKKQI 95
Query: 88 HRP 90
Sbjct: 96 KDK 98
>gi|227501477|ref|ZP_03931526.1| SAF domain protein [Corynebacterium accolens ATCC 49725]
gi|227077502|gb|EEI15465.1| SAF domain protein [Corynebacterium accolens ATCC 49725]
Length = 241
Score = 36.9 bits (84), Expect = 0.93, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS-IKDVVGLVTRRVLLPD 79
A + +V S + AG L+ + + ++ +S+I + D+ G +
Sbjct: 46 RAKELPQVLVFSHDLPAGAELSAADVSLERLPSSSIPSSALADAPSDLAGRIITAAAGKG 105
Query: 80 HVIPLSVLHRPYVI 93
V+ L ++
Sbjct: 106 EVVTSQRLLGQELV 119
>gi|86137992|ref|ZP_01056568.1| CpaB family protein [Roseobacter sp. MED193]
gi|85825584|gb|EAQ45783.1| CpaB family protein [Roseobacter sp. MED193]
Length = 286
Score = 36.9 bits (84), Expect = 0.93, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 31/112 (27%), Gaps = 8/112 (7%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
V + + GE L E +++++ + I +++ + L
Sbjct: 47 TTDVFVATKQLKYGERLTEDAVRKVRWPSDAIPEGAFTTLETLFPPANPGDLRVVLRTME 106
Query: 85 SV--LHRPYVISRGAKVRIILTQG----NMTISTAGIALSDA--SIGDVIAV 128
L + + G I IS + GD + V
Sbjct: 107 KDEALLEAKLTNPGQDAGITSQLQRGMRAFAISVDVSSGVSGFLRPGDHVDV 158
>gi|254478253|ref|ZP_05091634.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653]
gi|214035849|gb|EEB76542.1| SAF domain family protein [Carboxydibrachium pacificum DSM 12653]
Length = 181
Score = 36.9 bits (84), Expect = 0.94, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
V+ I AG V++E +K + V S + +YA S DVVG V + + I
Sbjct: 29 TEKVVIVEKDIPAGTVISEDAVKVIDVPASVVNPDYARSPADVVGKVVKEGRVRGDFI 86
>gi|139438675|ref|ZP_01772159.1| Hypothetical protein COLAER_01160 [Collinsella aerofaciens ATCC
25986]
gi|133775755|gb|EBA39575.1| Hypothetical protein COLAER_01160 [Collinsella aerofaciens ATCC
25986]
Length = 224
Score = 36.9 bits (84), Expect = 0.95, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 25/56 (44%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
V + I+ GE L+E+ + + S + + ++ V G VT + + VI
Sbjct: 54 EVCVAARDIDVGETLDETNVITQEWLTSLLPRDAVTELRQVRGDVTTSRIPKNAVI 109
>gi|73542328|ref|YP_296848.1| Flp pilus assembly CpaB [Ralstonia eutropha JMP134]
gi|72119741|gb|AAZ62004.1| Flp pilus assembly CpaB [Ralstonia eutropha JMP134]
Length = 280
Score = 36.9 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + +N G+ LN S+L+ + +++ +K + G V R L + +
Sbjct: 38 QVVVAANDLNLGQPLNGSQLRLVNWPTASVPPGAFEDLKLLEGRVVRTSLQRGEPVLDAK 97
Query: 87 LHRPYVISRGAKVRIILTQGNMTIST 112
L G I + +T+
Sbjct: 98 LAPI-GTKGGLSAVINDGKRAITVRV 122
>gi|311899773|dbj|BAJ32181.1| hypothetical protein KSE_64220 [Kitasatospora setae KM-6054]
Length = 223
Score = 36.9 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 38/131 (29%), Gaps = 17/131 (12%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
V + + G+V++ L + +R A ++ +GL L ++ S
Sbjct: 56 VVALARDVPMGQVISSDDLVVAHIAGDPALRPLDARDLQGTIGLRATTDLKRGALLVKSD 115
Query: 87 LHRPYVISRGAKVRIILTQ----------GNMTI-STAGIALSDASIGDVIAVKNIDTGV 135
L G ++ + + + I A S G +
Sbjct: 116 LTSDPATQAGQQIVGVYAKRSQLPATKLQPGLQILIVNAPAGDGGSAGAT-----TRSPD 170
Query: 136 MVSGSVVDTGT 146
++ V G
Sbjct: 171 TLTAVVAAVGR 181
>gi|303241713|ref|ZP_07328210.1| Flp pilus assembly protein CpaB [Acetivibrio cellulolyticus CD2]
gi|302590714|gb|EFL60465.1| Flp pilus assembly protein CpaB [Acetivibrio cellulolyticus CD2]
Length = 250
Score = 36.9 bits (84), Expect = 0.98, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 29/85 (34%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
+ V + + A + E+ +K+ +VT + + D++G +
Sbjct: 30 ATVKPDVVEYIDVYVAAKTMAAKYEITEADIKKTRVTKEYLNTDAVLVQADIIGKRLKES 89
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVR 100
++ I S L + + V
Sbjct: 90 VIEGEQILRSRLVQEDNFTLAYNVP 114
>gi|126733572|ref|ZP_01749319.1| Flp pilus assembly CpaB [Roseobacter sp. CCS2]
gi|126716438|gb|EBA13302.1| Flp pilus assembly CpaB [Roseobacter sp. CCS2]
Length = 258
Score = 36.9 bits (84), Expect = 0.98, Method: Composition-based stats.
Identities = 7/67 (10%), Positives = 23/67 (34%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
S A PS + GE+L ++ ++ ++ + +++ +
Sbjct: 29 SATAIRTVDIYAPSRDLTYGELLTADDVQIIKYARDHLPEGVFATEEELFPEGLNTPRVV 88
Query: 79 DHVIPLS 85
+ ++
Sbjct: 89 RLPMQVN 95
>gi|315497466|ref|YP_004086270.1| flp pilus assembly protein cpab [Asticcacaulis excentricus CB 48]
gi|315415478|gb|ADU12119.1| Flp pilus assembly protein CpaB [Asticcacaulis excentricus CB 48]
Length = 304
Score = 36.9 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 28/115 (24%), Gaps = 6/115 (5%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+V + + GE + E+ L I +Y V + +
Sbjct: 47 TVKVLVAARHLKVGERIAEADLAWKAWPEDGITESYFTDKP-VTPVAPAEAKSAEDKALE 105
Query: 85 SVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSG 139
+ + + M G+ + + I + +V
Sbjct: 106 EKVKNGAAQVADVADKTLNPTRGMDAVLGGVVREEMLANEPIVAR-----KVVRA 155
>gi|220922778|ref|YP_002498080.1| Flp pilus assembly protein CpaB [Methylobacterium nodulans ORS
2060]
gi|219947385|gb|ACL57777.1| Flp pilus assembly protein CpaB [Methylobacterium nodulans ORS
2060]
Length = 267
Score = 36.9 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 25/74 (33%), Gaps = 6/74 (8%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS------IKDVVGLVTRRV 75
+ +V + + G++L L+ +++ + ++D +G R
Sbjct: 41 VADTVDVLVAAADLPMGQILKPGDLRWQAWPKTSLNDGFLQREQNANALEDTLGSFVRSP 100
Query: 76 LLPDHVIPLSVLHR 89
L I L +
Sbjct: 101 FLGGEPIRREKLIK 114
>gi|307265038|ref|ZP_07546599.1| SAF domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306920023|gb|EFN50236.1| SAF domain protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 181
Score = 36.9 bits (84), Expect = 1.00, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
VV I AG V++E +K + V S + +YA S DVVG V + + I
Sbjct: 29 TEKVVVVEKDIPAGTVISEDAVKVIDVPASVVNPSYARSPADVVGKVVKDGRVKGDFI 86
>gi|218546631|gb|ACK98962.1| flp pilus assembly protein FlpB [Aeromonas salmonicida subsp.
achromogenes]
Length = 90
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS---NIRGNYAHSIK 65
L+ +S + + +V + + AG ++ L + + N+ G +
Sbjct: 37 LTSESTASDRVAQVLVAAHRVQAGSFIHPEDLVWQTLPAAEEMNLPGLFLFGFT 90
>gi|186474102|ref|YP_001861444.1| Flp pilus assembly protein CpaB [Burkholderia phymatum STM815]
gi|184196434|gb|ACC74398.1| Flp pilus assembly protein CpaB [Burkholderia phymatum STM815]
Length = 282
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 1/95 (1%)
Query: 18 DSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLL 77
++ V+ S ++ G+ ++ LK ++ + +K + G V + L
Sbjct: 29 VQQTSTSTTKVVIASADMSLGQRVSPEMLKVSDWPAGSVPPGTFNDVKKLEGRVLKASLS 88
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTIST 112
+ + L G I + +T+
Sbjct: 89 RGEPVLEAKLSPV-GTLGGLSAVINEGKRAITVRV 122
>gi|313677870|ref|YP_004055866.1| n-acetylneuraminate synthase [Marivirga tractuosa DSM 4126]
gi|312944568|gb|ADR23758.1| N-acetylneuraminate synthase [Marivirga tractuosa DSM 4126]
Length = 353
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ L F + L+ +S+ A +++ + I G V+ + L + I +
Sbjct: 272 ITLLGDFEVKKLASESISAENARRSLIATSDIPKGTVITKDHLTWKR-PAYGISPKFI-- 328
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLH 88
++G T + D V+ ++
Sbjct: 329 -DQLIGKKTLFDIKEDDVLKWNLFE 352
>gi|77454606|ref|YP_345474.1| hypothetical protein pREL1_0039 [Rhodococcus erythropolis PR4]
gi|77019606|dbj|BAE45982.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 234
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASV-----IGHAVVPSVVINAGEVLNESRLKEMQVTNSN- 55
+ + +L V+++ + A+V +V + + G+++ L V
Sbjct: 42 RPIYLAIGVALVVVAVIGMLAAVSAMRATTDVLVLARDVQQGQIIESKDLTVKTVNVDAD 101
Query: 56 IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115
+ A V+G+ L V+ + + + G + ++ +T+ +
Sbjct: 102 LGALSAGERGRVIGMSAGTRLPAGTVLMPAAVTDQ--VVPGEGLTMV----GITVGYPHL 155
Query: 116 ALSDASIGDVIAV 128
GD+I V
Sbjct: 156 PSEAILPGDMIRV 168
>gi|229827062|ref|ZP_04453131.1| hypothetical protein GCWU000182_02446 [Abiotrophia defectiva ATCC
49176]
gi|229788680|gb|EEP24794.1| hypothetical protein GCWU000182_02446 [Abiotrophia defectiva ATCC
49176]
Length = 278
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 28/90 (31%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
V I GE++ +L+ + V + + SI + G + I
Sbjct: 38 EVVRVKEKITEGELITADKLETVNVGAYGLSPDVVKSIDGITGKYAKTDFYKGSYITGEG 97
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIA 116
L + I + ++I+ A
Sbjct: 98 LSDVALEEDTYLNDIPEDKYAISITIQSFA 127
>gi|304391083|ref|ZP_07373035.1| hypothetical protein HMPREF0574_1813 [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304325966|gb|EFL93212.1| hypothetical protein HMPREF0574_1813 [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 187
Score = 36.9 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 32/89 (35%), Gaps = 1/89 (1%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
++ + V+ + + + G +V + AG + ++ + G Y +
Sbjct: 1 MILAVILVIVTVRVTSHLEG-YLVAKTTLVAGHTVQSGDIEVISANPGRAAGQYLREGEM 59
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISR 95
G V + + +IP + L + +
Sbjct: 60 QEGSVVVQTIAGGQLIPKASLSQTEPFRK 88
>gi|27381082|ref|NP_772611.1| polysaccharide biosynthesis related protein [Bradyrhizobium
japonicum USDA 110]
gi|27354248|dbj|BAC51236.1| blr5971 [Bradyrhizobium japonicum USDA 110]
Length = 641
Score = 36.9 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 4/64 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
+V + I AG V+++ + + ++G + +R + D S L
Sbjct: 299 LVAARDIEAGTVISDDDIAVKSPGQGLSP----LKMPALIGKILKRKMAADDYFFQSDLD 354
Query: 89 RPYV 92
Sbjct: 355 EGAA 358
>gi|229492883|ref|ZP_04386679.1| SAF domain protein [Rhodococcus erythropolis SK121]
gi|229320157|gb|EEN85982.1| SAF domain protein [Rhodococcus erythropolis SK121]
Length = 234
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASV-----IGHAVVPSVVINAGEVLNESRLKEMQVTNSN- 55
+ + +L V+++ + A+V +V + + G+V+ L V
Sbjct: 42 RPIYLAVGIALVVVAVIGMLAAVSAMRATTDVLVLARDVQQGQVIESKDLTVKTVNVDAD 101
Query: 56 IRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115
+ A V+G+ L V+ + + + G + ++ +T+ +
Sbjct: 102 LGALSAGERGRVIGMSAGTRLPAGSVLMPAAVTDQ--VVPGEGLTMV----GITVGYPHL 155
Query: 116 ALSDASIGDVIAV 128
GD+I V
Sbjct: 156 PSEAIVPGDMIRV 168
>gi|27381103|ref|NP_772632.1| hypothetical protein blr5992 [Bradyrhizobium japonicum USDA 110]
gi|27354269|dbj|BAC51257.1| blr5992 [Bradyrhizobium japonicum USDA 110]
Length = 356
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 6/41 (14%), Positives = 16/41 (39%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
V ++V + + AGE++ + + + +Y
Sbjct: 300 VPVARKSIVAARALRAGEIIGPADITAKRPGAGRPPIDYWS 340
>gi|296122068|ref|YP_003629846.1| Flp pilus assembly protein CpaB [Planctomyces limnophilus DSM 3776]
gi|296014408|gb|ADG67647.1| Flp pilus assembly protein CpaB [Planctomyces limnophilus DSM 3776]
Length = 334
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 27/69 (39%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
+ + I G ++ E + V NS ++ + + + +VG V R +
Sbjct: 38 VIATRNVPMAISDIEPGTLITEGHIGLGPVQNSQLKPDMLLANRVIVGRVARTKIRAAEP 97
Query: 82 IPLSVLHRP 90
I L++P
Sbjct: 98 IRAGQLYQP 106
>gi|298345610|ref|YP_003718297.1| hypothetical protein HMPREF0573_10484 [Mobiluncus curtisii ATCC
43063]
gi|304390701|ref|ZP_07372654.1| SAF domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315657893|ref|ZP_07910773.1| SAF domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|298235671|gb|ADI66803.1| hypothetical protein HMPREF0573_10484 [Mobiluncus curtisii ATCC
43063]
gi|304326457|gb|EFL93702.1| SAF domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315491690|gb|EFU81301.1| SAF domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 198
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 29/86 (33%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
L +++V L VV + AG + ++ + S + ++
Sbjct: 17 LAILAVFVAVTLFLPEKAAATVVVVKHEVCAGCEITAQDVRLSALAPSAVPQDHFQKADR 76
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYV 92
V+G L V+ ++L V
Sbjct: 77 VIGKTAAVSLTSGTVLQPALLVENAV 102
>gi|107028249|ref|YP_625344.1| Flp pilus assembly CpaB [Burkholderia cenocepacia AU 1054]
gi|116687160|ref|YP_840407.1| Flp pilus assembly CpaB [Burkholderia cenocepacia HI2424]
gi|105897413|gb|ABF80371.1| Flp pilus assembly CpaB [Burkholderia cenocepacia AU 1054]
gi|116652875|gb|ABK13514.1| Flp pilus assembly CpaB [Burkholderia cenocepacia HI2424]
Length = 279
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 25/73 (34%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L S + V + +N GE L +++ + ++ K + G V R L
Sbjct: 28 LVQTSTSSVTSVAVATTDLNLGEPLGPNQIHMVSWPAGSVPTGAFTDTKTLEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHR 89
+ S L
Sbjct: 88 ARGEPVIESKLAP 100
>gi|256827719|ref|YP_003151678.1| SAF domain-containing protein [Cryptobacterium curtum DSM 15641]
gi|256583862|gb|ACU94996.1| SAF domain-containing protein [Cryptobacterium curtum DSM 15641]
Length = 210
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 25/98 (25%), Gaps = 8/98 (8%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP--- 83
V + I GE + + ++ ++ D+ G + VI
Sbjct: 49 QVCVATRDIAPGETYSSANVELRSWIAELSPRQAVGTVADIEGKQAAGPVSSGEVITTVR 108
Query: 84 -LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
V + V I + G +L
Sbjct: 109 CADNTAAIQVPAGKQAVSIAVESS----QAVGGSLEAG 142
>gi|323702231|ref|ZP_08113897.1| SAF domain-containing protein [Desulfotomaculum nigrificans DSM
574]
gi|323532721|gb|EGB22594.1| SAF domain-containing protein [Desulfotomaculum nigrificans DSM
574]
Length = 212
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 20 LFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPD 79
A+ + I G + ES +KE+ ++ N K++VG +L D
Sbjct: 30 AAATKPTKVYQAAKFIPQGTTIKESDIKEVDFP-ESLSSNLIKDKKEIVGKGAVVSMLKD 88
Query: 80 HVIPLSVLHR 89
I +
Sbjct: 89 QKIYKGSVSP 98
>gi|296444396|ref|ZP_06886361.1| Flp pilus assembly protein CpaB [Methylosinus trichosporium OB3b]
gi|296258043|gb|EFH05105.1| Flp pilus assembly protein CpaB [Methylosinus trichosporium OB3b]
Length = 264
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 14/116 (12%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK------DVVGLVTRRVLLP 78
+V + + G L E+ ++ S + + D+ G R L
Sbjct: 44 TDQVLVAARDLPFGAALAEADTSWIEWPISAVPPGVLRKSEAPEIKKDIEGAFVRTPLAN 103
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTI------STAGIALSDASIGDVIAV 128
I L + I + + I + G L + + DVI +
Sbjct: 104 GEPIRRERLIKGQTPGL-MSTMISAGRRAVAIDVSPNTTAGGFILPNDHV-DVIRL 157
>gi|240139025|ref|YP_002963500.1| pilus assembly protein cpaB [Methylobacterium extorquens AM1]
gi|240008997|gb|ACS40223.1| pilus assembly protein cpaB [Methylobacterium extorquens AM1]
Length = 261
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 37/118 (31%), Gaps = 8/118 (6%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS------IKDVVGLVT 72
+ + +V + + G+ L L+ + I ++D VG +
Sbjct: 40 PVVPVPMSEVLVAAAELPMGQTLKPEDLRWIAWPEQAISPGLIERRAAPKGLEDSVGAII 99
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
R + I L + A + + +T T G + + + D + V
Sbjct: 100 RTGFSANEPIRPERLVKAGSGFMSAILPPGMRAVAITTDTRGSSSAGGFVLPNDHVDV 157
>gi|238062116|ref|ZP_04606825.1| SAF domain-containing protein [Micromonospora sp. ATCC 39149]
gi|237883927|gb|EEP72755.1| SAF domain-containing protein [Micromonospora sp. ATCC 39149]
Length = 219
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDVVGLVTR 73
+ G + + + G L L +QV +R A + DVVG+
Sbjct: 47 AAFAVTSVRATGSYLAVARPVEVGRTLGADDLVTVQVAGGQGLRPVPAAQLDDVVGMRAA 106
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAK 98
L P ++ L L ++ G +
Sbjct: 107 VALTPGTLLTLGQLTDDPLLGPGQQ 131
>gi|221197780|ref|ZP_03570826.1| Flp pilus assembly protein CpaB [Burkholderia multivorans CGD2M]
gi|221204662|ref|ZP_03577679.1| Flp pilus assembly protein CpaB [Burkholderia multivorans CGD2]
gi|221175519|gb|EEE07949.1| Flp pilus assembly protein CpaB [Burkholderia multivorans CGD2]
gi|221181712|gb|EEE14113.1| Flp pilus assembly protein CpaB [Burkholderia multivorans CGD2M]
Length = 309
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
A+ V+ + + AG+ + LK S + +VG V R +
Sbjct: 42 AASPVPIVIATRTLPAGQPIAADALKIQ--PTSPVPAGAFADASTLVGRVPARDIPASSP 99
Query: 82 IPLSVL 87
+ L
Sbjct: 100 VVSDAL 105
>gi|221213140|ref|ZP_03586116.1| Flp pilus assembly protein CpaB [Burkholderia multivorans CGD1]
gi|221167353|gb|EED99823.1| Flp pilus assembly protein CpaB [Burkholderia multivorans CGD1]
Length = 309
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
A+ V+ + + AG+ + LK S + +VG V R +
Sbjct: 42 AASPVPIVIATRTLPAGQPIAADALKIQ--PTSPVPAGAFADASTLVGRVPARDIPASSP 99
Query: 82 IPLSVL 87
+ L
Sbjct: 100 VVSDAL 105
>gi|228925187|ref|ZP_04088297.1| hypothetical protein bthur0011_60590 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228834526|gb|EEM80055.1| hypothetical protein bthur0011_60590 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 286
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N + K+VVG T
Sbjct: 41 IVVAAKDIPAHTEIKEDMLVERTLPGDAIPPNALRANKKEVVGKWTNDGQPITEN 95
>gi|254466356|ref|ZP_05079767.1| Flp pilus assembly protein CpaB [Rhodobacterales bacterium Y4I]
gi|206687264|gb|EDZ47746.1| Flp pilus assembly protein CpaB [Rhodobacterales bacterium Y4I]
Length = 285
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 34/112 (30%), Gaps = 8/112 (7%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV----VGLVTRRVLLPDH 80
V + + GE L++ ++ ++ + I ++ + G R VL
Sbjct: 47 TVDVFVATKPLKYGERLSQDAVRAVRWPENAIPEGAYTTLDALFPPQSGDKLRVVLRAME 106
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQG--NMTISTAGIALSDA--SIGDVIAV 128
+ + A + L +G I + GD + V
Sbjct: 107 KDEAVMAVKVTAPGEDAGITSRLQRGMRAFAIKVDVSSGVSGFLRPGDKVDV 158
>gi|120603674|ref|YP_968074.1| N-acylneuraminate-9-phosphate synthase [Desulfovibrio vulgaris DP4]
gi|120563903|gb|ABM29647.1| N-acetylneuraminate synthase [Desulfovibrio vulgaris DP4]
Length = 352
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
+V + I AG+VL + L + I +VVG+ R + D V+ L
Sbjct: 297 LVAARAIPAGKVLEPADLTWKR-PAHGISPRCY---DEVVGMKARADIAEDTVLKWGHLE 352
>gi|46578765|ref|YP_009573.1| NeuB family protein [Desulfovibrio vulgaris str. Hildenborough]
gi|46448177|gb|AAS94832.1| NeuB family protein [Desulfovibrio vulgaris str. Hildenborough]
gi|311232632|gb|ADP85486.1| N-acetylneuraminate synthase [Desulfovibrio vulgaris RCH1]
Length = 352
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
+V + I AG+VL + L + I +VVG+ R + D V+ L
Sbjct: 297 LVAARAIPAGKVLEPADLTWKR-PAHGISPRCY---DEVVGMKARADIAEDTVLKWGHLE 352
>gi|330959994|gb|EGH60254.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 319
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 37/114 (32%), Gaps = 8/114 (7%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
+ ++ VV + + A + L ++ + +I +VG + R L
Sbjct: 55 TPPVEDALRHDVVVVARDVPAYTPITPEDLLIERLKVA--PPGSFDTIDKLVGRSSWRTL 112
Query: 77 LPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
+ S ++R I + + + + + + GD + V
Sbjct: 113 SAGTWLSESNFEAGGTLAR----MIRPHERALALQVDEVIGASGQLSPGDYVDV 162
>gi|257068486|ref|YP_003154741.1| SAF domain-containing protein [Brachybacterium faecium DSM 4810]
gi|256559304|gb|ACU85151.1| SAF domain-containing protein [Brachybacterium faecium DSM 4810]
Length = 211
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 26/66 (39%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + G L+ + L+ ++ + A I+DVVG R + P + +
Sbjct: 48 EIVVADAELTPGTALSRADLRTARIAPELLPEGAAQQIEDVVGQTARLPIEPGTPLLPGL 107
Query: 87 LHRPYV 92
L P
Sbjct: 108 LEDPAA 113
>gi|218546637|gb|ACK98964.1| flp pilus assembly protein FlpB [Aeromonas salmonicida subsp.
smithia]
Length = 86
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS---NIRGNYA 61
L+ +S + + +V + + AG ++ L + + N+ G +
Sbjct: 37 LTSESTASDRVAQVLVAAHRVQAGSFIHPEDLVWQTLPAAEEMNLPGLFL 86
>gi|104779899|ref|YP_606397.1| Flp pilus assembly protein CpaB [Pseudomonas entomophila L48]
gi|95108886|emb|CAK13582.1| putative Flp pilus assembly protein CpaB [Pseudomonas entomophila
L48]
Length = 316
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 16/121 (13%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + A L E + ++ + + V+G + R L + S
Sbjct: 63 PIVVLRKAVPANVPLTEDDVLVERLQV--VPAGAFQQLDQVLGRSSSRPLAAGSWLDDSS 120
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK--------NIDTGVM 136
++R I + + ++ + + + GD + V N +
Sbjct: 121 FQAGGPLAR----MIRANERAVAVAVDDVIGAAGQLRPGDFVDVLLFLREENNNPQSSAQ 176
Query: 137 V 137
V
Sbjct: 177 V 177
>gi|269958186|ref|YP_003327974.1| SAF domain protein [Xylanimonas cellulosilytica DSM 15894]
gi|269306867|gb|ACZ32416.1| SAF domain protein [Xylanimonas cellulosilytica DSM 15894]
Length = 234
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 49/131 (37%), Gaps = 12/131 (9%)
Query: 11 SLYVLSLDSLFA----SVIGHAVVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYAHSIK 65
++ + +L S++A S + + G+V+ + L ++++ +
Sbjct: 49 TVCLGALVSVWAFQSTSDAQEVLAVRETVVRGQVITKDDLMSVRISVDPALHPVATSQSA 108
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
VVG L+ V+ + V + G V + +++A + +GD
Sbjct: 109 TVVGKRAALDLVAGGVVTAEQVTDTPVPADGQSVV------GLNLTSAMLPAQQIRVGDK 162
Query: 126 IAVKNIDTGVM 136
+ + + +G
Sbjct: 163 VRIVST-SGQT 172
>gi|254473714|ref|ZP_05087109.1| Flp pilus assembly protein CpaB [Pseudovibrio sp. JE062]
gi|211957100|gb|EEA92305.1| Flp pilus assembly protein CpaB [Pseudovibrio sp. JE062]
Length = 259
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 34/111 (30%), Gaps = 12/111 (10%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS------IKDVVGLVTRRVLLPDH 80
+V + + G L E L + ++ ++ +G + + +
Sbjct: 46 EILVAAQDLKVGTALTEGDLSWAKWPEESVSDGVILRSSSPQADEEFLGQIIKAAMFSGE 105
Query: 81 VIPLSVLHRPYVISRGAKVRIILTQ-GNMTISTAGIALSDASI--GDVIAV 128
I L +G I+ + + ++ + I GD + V
Sbjct: 106 PIRAERLINT---DKGFLAAILPKGKRAVAVPVDAVSTAGGFILPGDKVDV 153
>gi|254762576|ref|ZP_05214416.1| Flp pilus assembly protein CpaB [Bacillus anthracis str.
Australia 94]
Length = 201
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N + K+VVG T
Sbjct: 41 IVVAAKDIPAHTEIKEDMLVERTLPGDAIPPNALRANKKEVVGKWTNDGQPITEN 95
>gi|47568973|ref|ZP_00239664.1| conserved hypothetical protein protein [Bacillus cereus G9241]
gi|301068118|ref|YP_003786889.1| hypothetical protein BACI_pCIXO100760 [Bacillus anthracis CI]
gi|47554357|gb|EAL12717.1| conserved hypothetical protein protein [Bacillus cereus G9241]
gi|300379208|gb|ADK08111.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 286
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N + K+VVG T
Sbjct: 41 IVVAAKDIPAHTEIKEDMLVERTLPGDAIPPNALRANKKEVVGKWTNDGQPITEN 95
>gi|317489752|ref|ZP_07948251.1| SAF domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|316911098|gb|EFV32708.1| SAF domain-containing protein [Eggerthella sp. 1_3_56FAA]
Length = 215
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 6/98 (6%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI---P 83
V I AGE ++ S ++ + S DVVG +L V+
Sbjct: 49 EVCVAKRDIAAGESVDASAVETRLWVADLLPAEAFRSSGDVVGKKASSTILAGEVLSERR 108
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+ G + + + G A++ S
Sbjct: 109 FRDAGSRLDVPEGLTALSVPAKD---VQAVGGAVAAGS 143
>gi|227811503|ref|YP_002811514.1| Flp pilus assembly protein CpaB [Bacillus anthracis str. CDC 684]
gi|254687774|ref|ZP_05151630.1| Flp pilus assembly protein CpaB [Bacillus anthracis str.
CNEVA-9066]
gi|254739264|ref|ZP_05196966.1| Flp pilus assembly protein CpaB [Bacillus anthracis str. Western
North America USA6153]
gi|254745060|ref|ZP_05202737.1| Flp pilus assembly protein CpaB [Bacillus anthracis str. Kruger
B]
gi|254756463|ref|ZP_05208492.1| Flp pilus assembly protein CpaB [Bacillus anthracis str. Vollum]
gi|227008105|gb|ACP17847.1| Flp pilus assembly protein CpaB [Bacillus anthracis str. CDC 684]
Length = 286
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N + K+VVG T
Sbjct: 41 IVVAAKDIPAHTEIKEDMLVERTLPGDAIPPNALRANKKEVVGKWTNDGQPITEN 95
>gi|163745847|ref|ZP_02153206.1| CpaB family protein [Oceanibulbus indolifex HEL-45]
gi|161380592|gb|EDQ05002.1| CpaB family protein [Oceanibulbus indolifex HEL-45]
Length = 286
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 27/111 (24%), Gaps = 7/111 (6%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
V + G+ L ++ + + I + T+ + I
Sbjct: 47 TQTVWVAEKPLKYGQPLTREDVRAVNWPENAIPEGSFIEETLLFPENTKDHRIVLRNIEK 106
Query: 85 SVLHRPYVISR-----GAKVRIILTQGNMTISTAGIALSDA--SIGDVIAV 128
++ G R+ TI + GD + V
Sbjct: 107 DEAIMAVKVTEPGEDSGLTSRLARGMRAFTIKVDVSSGVSGFLRPGDRVDV 157
>gi|91977984|ref|YP_570643.1| Flp pilus assembly CpaB [Rhodopseudomonas palustris BisB5]
gi|91684440|gb|ABE40742.1| Flp pilus assembly CpaB [Rhodopseudomonas palustris BisB5]
Length = 266
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 32/115 (27%), Gaps = 15/115 (13%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK------DVVGLVTRRVLLP 78
+V I G+ + ++ + N+ + + G + R +
Sbjct: 43 TVEVLVAKSDIPLGQPVGPGDMQWQTWPAATASANFIRRNERPEATTQLAGSIARSQFIA 102
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG-----DVIAV 128
I L + G+ + M + I+ + G D + V
Sbjct: 103 GEPIREQKLVKA----NGSGFMAAILPTGMRAVSTEISPETGAGGFILPNDRVDV 153
>gi|167648153|ref|YP_001685816.1| Flp pilus assembly protein CpaB [Caulobacter sp. K31]
gi|167350583|gb|ABZ73318.1| Flp pilus assembly protein CpaB [Caulobacter sp. K31]
Length = 296
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 4/39 (10%), Positives = 13/39 (33%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ +V + G+ L + + + I + +
Sbjct: 47 MTQVLVAKRDLAIGQRLTAADVTWQPWPSDTINAAFITN 85
>gi|78062907|ref|YP_372815.1| Flp pilus assembly CpaB [Burkholderia sp. 383]
gi|77970792|gb|ABB12171.1| Flp pilus assembly CpaB [Burkholderia sp. 383]
Length = 342
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 5/87 (5%)
Query: 8 LFFSLYVLSLDSLFASVI--GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
+ LYV + A+ V + + G +L ++ L ++ + + +
Sbjct: 20 ILRELYVAASTPSVATETDQARVRVAAADLPEGLLLRDNDLAWKRMPRAQVPAGAFVESQ 79
Query: 66 ---DVVGLVTRRVLLPDHVIPLSVLHR 89
D+ G + R + I + +
Sbjct: 80 PGADLKGALLRNHVGAGAPIRVENVIP 106
>gi|167038605|ref|YP_001666183.1| SAF domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116994|ref|YP_004187153.1| SAF domain-containing protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166857439|gb|ABY95847.1| SAF domain [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319930085|gb|ADV80770.1| SAF domain protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 181
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
V+ I AG V++E +K + V S ++ NYA S+ +VVG V + + I
Sbjct: 29 TEKVVIVEKDIPAGTVISEDAVKVVDVPASAVKPNYARSLSNVVGKVVKEGRVRGDFI 86
>gi|189016770|ref|YP_001711809.1| hypothetical protein CMS_pCSL0080 [Clavibacter michiganensis subsp.
sepedonicus]
gi|167728941|emb|CAQ03323.1| hypothetical protein pCSL0080 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 231
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY-AHSIKDVVGLVTRRVLLPDHVIPL 84
V S I G++++++ L + ++ DV+G L ++
Sbjct: 64 QQVFVSSRDIARGQIISQTDLGTLDISQGQNTQGIPVADAADVIGQTATVDLPAGSLVTS 123
Query: 85 SVLHRPYVISRG 96
S + + G
Sbjct: 124 SSVAPALSVPDG 135
>gi|319795563|ref|YP_004157203.1| flp pilus assembly protein cpab [Variovorax paradoxus EPS]
gi|315598026|gb|ADU39092.1| Flp pilus assembly protein CpaB [Variovorax paradoxus EPS]
Length = 319
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 18/70 (25%), Gaps = 2/70 (2%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPDHVIPL 84
VV I G + + + V N + + S G + +
Sbjct: 59 DVVVARQPIGEGSQVLPGMVAKRSVPNEYLHNDALTPESFAQFAGRQLTVPVAAGKPLLA 118
Query: 85 SVLHRPYVIS 94
S P +
Sbjct: 119 SFFAAPRKVF 128
>gi|289704896|ref|ZP_06501313.1| hypothetical protein HMPREF0569_0663 [Micrococcus luteus SK58]
gi|289558392|gb|EFD51666.1| hypothetical protein HMPREF0569_0663 [Micrococcus luteus SK58]
Length = 747
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 7/61 (11%), Positives = 15/61 (24%), Gaps = 4/61 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
+V + + AG + + + +VG R + L
Sbjct: 405 LVAARPLQAGATITADDVTVKSPGRGLQPN----ELPRLVGRTLHREMAEGDFFFAGDLT 460
Query: 89 R 89
Sbjct: 461 D 461
>gi|283782738|ref|YP_003373492.1| hypothetical protein HMPREF0424_0231 [Gardnerella vaginalis 409-05]
gi|283441123|gb|ADB13589.1| hypothetical protein HMPREF0424_0231 [Gardnerella vaginalis 409-05]
Length = 284
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 33/95 (34%), Gaps = 2/95 (2%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAV-VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
+ L + +L + ++ S + V I G ++ + + ++V +
Sbjct: 57 IIVLCAGMMALLVVSTIIDSQETQVIAVAKHNIQKGSRVSVNDIAYVRVPKHKVFNQALS 116
Query: 63 -SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96
+I ++ + I ++L + I G
Sbjct: 117 NNISANASIIATCEIRKGMPILQTLLSKIPRIPEG 151
>gi|228969250|ref|ZP_04130128.1| hypothetical protein bthur0004_59710 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228790443|gb|EEM38166.1| hypothetical protein bthur0004_59710 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 286
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N + K+VVG T
Sbjct: 41 IVVAAKDIPAHTEIKEDMLVERTLPGDAIPPNALRANKKEVVGKWTNDGQPITEN 95
>gi|197123318|ref|YP_002135269.1| Flp pilus assembly protein CpaB [Anaeromyxobacter sp. K]
gi|196173167|gb|ACG74140.1| Flp pilus assembly protein CpaB [Anaeromyxobacter sp. K]
Length = 307
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 25/70 (35%)
Query: 13 YVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
YV + + VV ++ + L L +Q ++N+ A +V V
Sbjct: 47 YVETRTAAARVSTTPVVVATIDLPEATTLRADVLSVVQWPSANVPEGAASDPAKLVDRVV 106
Query: 73 RRVLLPDHVI 82
R ++ +
Sbjct: 107 RARVIKGEPV 116
>gi|134291858|ref|YP_001115627.1| SAF domain-containing protein [Burkholderia vietnamiensis G4]
gi|134135047|gb|ABO59372.1| SAF domain protein [Burkholderia vietnamiensis G4]
Length = 281
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 23/62 (37%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
V + +N GE L +++ + ++ K++ G V R L + S L
Sbjct: 39 VAVATTDLNLGEPLGPNQIHMVSWPAGSVPTGAFTDTKELEGRVVRTSLARGEPVIESKL 98
Query: 88 HR 89
Sbjct: 99 AP 100
>gi|33601079|ref|NP_888639.1| hypothetical protein BB2096 [Bordetella bronchiseptica RB50]
gi|33575514|emb|CAE32592.1| putative exported protein [Bordetella bronchiseptica RB50]
Length = 277
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 27/78 (34%), Gaps = 7/78 (8%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLVT 72
+ + AS +V + + AG L++ + + + + + G V
Sbjct: 44 QARVPMVAS-----LVAARDLEAGTPLHDELVAVRDMPQAWLPAGALPPDEAARLDGAVL 98
Query: 73 RRVLLPDHVIPLSVLHRP 90
R + + ++L P
Sbjct: 99 RAPVKAGEALQAALLSYP 116
>gi|228918617|ref|ZP_04082054.1| hypothetical protein bthur0012_57520 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228841025|gb|EEM86230.1| hypothetical protein bthur0012_57520 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 286
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N S +DVVG T
Sbjct: 41 IVVAAKDIPAHTEIKEDMLVERTLPGDAIPPNALRVSKRDVVGKWTNDGQPITEN 95
>gi|228969168|ref|ZP_04130064.1| Hypothetical secreted protein [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228790514|gb|EEM38219.1| Hypothetical secreted protein [Bacillus thuringiensis serovar
sotto str. T04001]
gi|326943829|gb|AEA19719.1| hypothetical protein CT43_P72025 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 269
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 11/81 (13%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSV-----------VINAGEVLNESRLKEMQVTNSN 55
L +L + + V S I + + L+ +V+NS+
Sbjct: 9 KLAITLAASIGLVVAIVGYENYAVSSKVNLQKVYFTKVDIPPRTKITKDMLQVREVSNSS 68
Query: 56 IRGNYAHSIKDVVGLVTRRVL 76
I N + D+VG T
Sbjct: 69 IPPNAIKNPNDIVGKYTVNGF 89
>gi|229065593|ref|ZP_04200823.1| hypothetical protein bcere0026_55960 [Bacillus cereus AH603]
gi|228715662|gb|EEL67455.1| hypothetical protein bcere0026_55960 [Bacillus cereus AH603]
Length = 286
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + +I N S K+VVG T
Sbjct: 41 IVVAAKDIPAHTEIKEDMLVERTLPGDSIPPNALRVSKKEVVGKWTNDGQPITEN 95
>gi|225871553|ref|YP_002752911.1| Flp pilus assembly protein CpaB [Bacillus cereus 03BB102]
gi|225785587|gb|ACO25805.1| Flp pilus assembly protein CpaB [Bacillus cereus 03BB102]
Length = 286
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N S KDVVG T
Sbjct: 41 IVVAAKDIPAHTEIKEDMLVERTLPGDAIPPNALRVSKKDVVGTWTNDGQPITEN 95
>gi|103487065|ref|YP_616626.1| N-acylneuraminate-9-phosphate synthase [Sphingopyxis alaskensis
RB2256]
gi|98977142|gb|ABF53293.1| N-acetylneuraminate synthase [Sphingopyxis alaskensis RB2256]
Length = 749
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
V+ ++V + I AG+ + + ++ Y ++VG + +R ++
Sbjct: 400 EVLAKSLVAARPIRAGQQIADEDIQIRSPGQGLQP--YFR--AELVGRIAKRDMIEGDFF 455
Query: 83 PLSVLHRPYVISRGA 97
S L +R
Sbjct: 456 FQSDLADAVASARDY 470
>gi|326943576|gb|AEA19469.1| hypothetical protein CT43_P281127 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 286
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N + K+VVG T
Sbjct: 41 IVVAAKDIPAHTEIKEDMLVERTLPGDAIPPNVLRANKKEVVGKWTNDGQPITEN 95
>gi|157502150|ref|YP_001485249.1| hypothetical protein pBMB67_063 [Bacillus thuringiensis]
gi|228942717|ref|ZP_04105245.1| Hypothetical secreted protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228975828|ref|ZP_04136358.1| Hypothetical secreted protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982331|ref|ZP_04142607.1| Hypothetical secreted protein [Bacillus thuringiensis Bt407]
gi|87133455|gb|ABD24365.1| hypothetical secreted protein [Bacillus thuringiensis]
gi|228777436|gb|EEM25727.1| Hypothetical secreted protein [Bacillus thuringiensis Bt407]
gi|228783854|gb|EEM31903.1| Hypothetical secreted protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228816928|gb|EEM63025.1| Hypothetical secreted protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 272
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 11/81 (13%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSV-----------VINAGEVLNESRLKEMQVTNSN 55
L +L + + V S I + + L+ +V+NS+
Sbjct: 12 KLAITLAASIGLVVAIVGYENYAVSSKVNLQKVYFTKVDIPPRTKITKDMLQVREVSNSS 71
Query: 56 IRGNYAHSIKDVVGLVTRRVL 76
I N + D+VG T
Sbjct: 72 IPPNAIKNPNDIVGKYTVNGF 92
>gi|312126639|ref|YP_003991513.1| SAF domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311776658|gb|ADQ06144.1| SAF domain protein [Caldicellulosiruptor hydrothermalis 108]
Length = 208
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 1/82 (1%)
Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
L F+ Y L ++ +V I AG + +L +V + A + K +
Sbjct: 19 LAFAEYYLLTNTANKPQYQLIIVAKQDIPAGAQITLDKLSVARVDV-RTPVHAATTRKQI 77
Query: 68 VGLVTRRVLLPDHVIPLSVLHR 89
+G + I L
Sbjct: 78 LGRYALYDIKAGEPIIPEHLTD 99
>gi|154250688|ref|YP_001411512.1| SAF domain-containing protein [Parvibaculum lavamentivorans DS-1]
gi|154154638|gb|ABS61855.1| SAF domain protein [Parvibaculum lavamentivorans DS-1]
Length = 250
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 38/120 (31%), Gaps = 7/120 (5%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+V S + G+ + L+ + ++++ G Y + L + +
Sbjct: 43 TTEVLVASSNLQLGQRIGGGDLRWQRWPDTSLNGAYITRNQSPAALEEYTGSVARASLLS 102
Query: 85 SV--LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG-----DVIAVKNIDTGVMV 137
V GA L + M + I ++ G D + + ++ G +
Sbjct: 103 GEPVTSEKLVTLTGAGFMSALIEPGMRATAISITPETSAGGFILPNDRVDIVDLAKGQTI 162
>gi|44004393|ref|NP_982061.1| hypothetical protein BCE_A0054 [Bacillus cereus ATCC 10987]
gi|190015216|ref|YP_001966616.1| hypothetical protein pPER272_AH820_0071 [Bacillus cereus]
gi|190015481|ref|YP_001966942.1| hypothetical protein pPER272_0071 [Bacillus cereus]
gi|190015561|ref|YP_001967244.1| hypothetical protein BcAH187_pCER270_0101 [Bacillus cereus]
gi|217956754|ref|YP_002335848.1| Flp pilus assembly protein CpaB [Bacillus cereus AH187]
gi|218848261|ref|YP_002454968.1| Flp pilus assembly protein CpaB [Bacillus cereus AH820]
gi|229020887|ref|ZP_04177586.1| hypothetical protein bcere0030_53460 [Bacillus cereus AH1273]
gi|229027753|ref|ZP_04183934.1| hypothetical protein bcere0029_59380 [Bacillus cereus AH1272]
gi|229035191|ref|ZP_04189127.1| hypothetical protein bcere0028_52090 [Bacillus cereus AH1271]
gi|229113409|ref|ZP_04242860.1| hypothetical protein bcere0018_55820 [Bacillus cereus Rock1-15]
gi|229142563|ref|ZP_04271044.1| hypothetical protein bcere0013_56190 [Bacillus cereus BDRD-ST26]
gi|229164946|ref|ZP_04292761.1| hypothetical protein bcere0009_56190 [Bacillus cereus R309803]
gi|42741459|gb|AAS44904.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
gi|116584468|gb|ABK00585.1| hypothetical protein BcAH187_pCER270_0101 [Bacillus cereus]
gi|116584892|gb|ABK01007.1| hypothetical protein pPER272_AH820_0071 [Bacillus cereus]
gi|116585162|gb|ABK01271.1| hypothetical protein pPER272_0071 [Bacillus cereus]
gi|217068624|gb|ACJ82872.1| Flp pilus assembly protein CpaB [Bacillus cereus AH187]
gi|218540312|gb|ACK92708.1| Flp pilus assembly protein CpaB [Bacillus cereus AH820]
gi|228618530|gb|EEK75541.1| hypothetical protein bcere0009_56190 [Bacillus cereus R309803]
gi|228640857|gb|EEK97207.1| hypothetical protein bcere0013_56190 [Bacillus cereus BDRD-ST26]
gi|228670023|gb|EEL25415.1| hypothetical protein bcere0018_55820 [Bacillus cereus Rock1-15]
gi|228728083|gb|EEL79123.1| hypothetical protein bcere0028_52090 [Bacillus cereus AH1271]
gi|228733545|gb|EEL84348.1| hypothetical protein bcere0029_59380 [Bacillus cereus AH1272]
gi|228740419|gb|EEL90718.1| hypothetical protein bcere0030_53460 [Bacillus cereus AH1273]
Length = 286
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N + K+VVG T
Sbjct: 41 IVVAAKDIPAHTEIKEDMLVERTLPGDAIPPNALRVNKKEVVGKWTNDGQPITEN 95
>gi|78066130|ref|YP_368899.1| Flp pilus assembly CpaB [Burkholderia sp. 383]
gi|77966875|gb|ABB08255.1| Flp pilus assembly CpaB [Burkholderia sp. 383]
Length = 300
Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V + + A+ VV + + AG+ + LK Q ++ +VG V
Sbjct: 34 VAPVAATVATQSVPVVVTTRALPAGQPIPADALKVQQ--STAAPQGAFADPLQLVGRVPA 91
Query: 74 RVLLPDHVIPLSVL 87
+ I S L
Sbjct: 92 ADIPAQAAIVASAL 105
>gi|254512153|ref|ZP_05124220.1| Flp pilus assembly protein CpaB [Rhodobacteraceae bacterium KLH11]
gi|221535864|gb|EEE38852.1| Flp pilus assembly protein CpaB [Rhodobacteraceae bacterium KLH11]
Length = 290
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 31/122 (25%), Gaps = 7/122 (5%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
L+ +V + + GE L + ++ +Q + I I +
Sbjct: 44 ALANAKAGLVPTVDVLVSNRSLKYGEQLTQEDIRVVQWPENAIPEGTFVEIAALFPDTRD 103
Query: 74 RVLLPDHVIPLS-VLHRPYVISRGAKVRIILTQG----NMTISTAGIALSDA--SIGDVI 126
+ + V + G + IS + GD +
Sbjct: 104 NERFVLRAMEKDEAIMAVKVTAPGETAGLRSQLPKGMRAFAISVDVASGVSGFLRPGDTV 163
Query: 127 AV 128
V
Sbjct: 164 DV 165
>gi|27376551|ref|NP_768080.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27349692|dbj|BAC46705.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
Length = 269
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 11/111 (9%), Positives = 29/111 (26%), Gaps = 7/111 (6%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+V I G+ + ++ + + + G+ +
Sbjct: 45 TVDVLVAKNDIGLGQTVKPEDVQWQTWPAATASATFIRRNERPEGVTQVTGSIARAPFIQ 104
Query: 85 SVLHRPYVISR--GAKVRIILTQGNMTISTAGIALSDASIG-----DVIAV 128
R + + G+ + M + I+ + G D + V
Sbjct: 105 GEPIRDQKLVKAEGSGFMAAILPTGMRAISTEISPETGAGGFILPNDRVDV 155
>gi|254506783|ref|ZP_05118923.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus 16]
gi|219550364|gb|EED27349.1| Flp pilus assembly protein CpaB [Vibrio parahaemolyticus 16]
Length = 233
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 12/128 (9%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
++ S I AG + E + + ++G V + P V+ +
Sbjct: 31 PVIIASQEIPAGTPIEEQHITTKLLEVEWRNEGQFTDQNAILGQVVATTIFPGEVLHQNR 90
Query: 87 LHRPYVISRGAKV--RIILTQGNMTISTAGIALSDASI--GDVIAVKNIDTGVMVSGSVV 142
L V G+ + I + +TI + + G+ + V N + S
Sbjct: 91 LT---VPGEGSTLASLIPENKRAVTIRVNDVIGVAGFLLPGNRVDVLN-----TIKYSAT 142
Query: 143 DTGTVRVV 150
TV V+
Sbjct: 143 SANTVTVL 150
>gi|87199102|ref|YP_496359.1| Flp pilus assembly CpaB [Novosphingobium aromaticivorans DSM 12444]
gi|87134783|gb|ABD25525.1| Flp pilus assembly CpaB [Novosphingobium aromaticivorans DSM 12444]
Length = 342
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 12/124 (9%), Positives = 34/124 (27%), Gaps = 10/124 (8%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--- 61
R L + + + +V + G ++ + ++ Y
Sbjct: 24 RSLFAGNSTPQAEAAAKVPTGPKVLVAQRALPVGTIITADSINFQAWPKDMVQDAYFVEG 83
Query: 62 -HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK-VRIILTQGNMTISTAGIALSD 119
++ ++G V R + + +++ G + M T ++
Sbjct: 84 EADMQKLLGTVVRNPITAGEPVTKGN-----LVAPGDRGFLAAALGAGMRAVTIPVSART 138
Query: 120 ASIG 123
G
Sbjct: 139 GVAG 142
>gi|254418623|ref|ZP_05032347.1| Flp pilus assembly protein CpaB [Brevundimonas sp. BAL3]
gi|196184800|gb|EDX79776.1| Flp pilus assembly protein CpaB [Brevundimonas sp. BAL3]
Length = 305
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 5/48 (10%), Positives = 14/48 (29%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVT 72
+ +V + + G+ L E+ L + + +
Sbjct: 45 MAKILVAAKNLEPGKRLAEADLAWKDWPVDEVNPAFITDGSTPIPAKP 92
>gi|83747918|ref|ZP_00944950.1| SIGNAL PEPTIDE HYPOTHETICAL; CpaB2 [Ralstonia solanacearum UW551]
gi|207739459|ref|YP_002257852.1| pilus assembly protein cpab [Ralstonia solanacearum IPO1609]
gi|83725451|gb|EAP72597.1| SIGNAL PEPTIDE HYPOTHETICAL; CpaB2 [Ralstonia solanacearum UW551]
gi|206592835|emb|CAQ59741.1| pilus assembly protein cpab [Ralstonia solanacearum IPO1609]
Length = 277
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 4/78 (5%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + AG+ + ++ + + + VVG + + S
Sbjct: 48 PVVVTVKPLEAGKPITADQVAVESLPIN--PADAFADAGKVVGREPITPIGTGVPLIGSQ 105
Query: 87 LHRPYV--ISRGAKVRII 102
L ++ G + I
Sbjct: 106 LSSGLALQVAPGQRAVAI 123
>gi|289581916|ref|YP_003480382.1| peptidase M29 aminopeptidase II [Natrialba magadii ATCC 43099]
gi|289531469|gb|ADD05820.1| peptidase M29 aminopeptidase II [Natrialba magadii ATCC 43099]
Length = 388
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 18/148 (12%), Positives = 53/148 (35%), Gaps = 16/148 (10%)
Query: 12 LYVLSLDSLFASVIGHAVVPSVVINAG--EVLNES--RLKEMQV--TNSNIRGNYAHSIK 65
+Y+ S + + + + E+ + + N ++ + +
Sbjct: 112 VYLSIRGGRNTSATADVPGETRTAHRQARDEIREARYDTRWVSTVHPNRSLAQQANMAYE 171
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI-ALSDASIGD 124
+ +L + + + ++ G++VR++ ++T+S G A++ A+
Sbjct: 172 EYQEFAYDAILRDWESLADEMANMKDLLDEGSEVRLVSEGTDLTMSIEGRTAVNSAA--- 228
Query: 125 VIAVK----NIDTGVMVSGSVVDTGTVR 148
+V N+ +G + + G V
Sbjct: 229 --SVAYDSHNLPSGEVFTAPAATEGEVT 254
>gi|110833079|ref|YP_691938.1| hypothetical protein ABO_0218 [Alcanivorax borkumensis SK2]
gi|110646190|emb|CAL15666.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 298
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 10/105 (9%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
V + +N G ++ + ++ S + + VVG + + ++
Sbjct: 56 TYWVATRELNIGSIVADDDF--QKIDVSAPLSSALQADAQVVGQRLFQHVRNGEILSQVH 113
Query: 87 LHRPYVISRGAKVRIILTQGNMTI---STAGIALSDASIGDVIAV 128
L ++ V + I S G L GD++ V
Sbjct: 114 LEAGNRLA--QSVPAQFRAFAIDIDNASAVGGLLE---PGDLVDV 153
>gi|207724790|ref|YP_002255187.1| pilus assembly protein cpab [Ralstonia solanacearum MolK2]
gi|206590015|emb|CAQ36976.1| pilus assembly protein cpab [Ralstonia solanacearum MolK2]
Length = 311
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 4/78 (5%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + AG+ + ++ + + + VVG + + S
Sbjct: 48 PVVVTVKPLEAGKPITADQVAVESLPIN--PADAFADAGKVVGREPITPIGTGVPLIGSQ 105
Query: 87 LHRPYV--ISRGAKVRII 102
L ++ G + I
Sbjct: 106 LSSGLALQVAPGQRAVAI 123
>gi|228912543|ref|ZP_04076208.1| hypothetical protein bthur0013_66020 [Bacillus thuringiensis IBL
200]
gi|228847113|gb|EEM92102.1| hypothetical protein bthur0013_66020 [Bacillus thuringiensis IBL
200]
Length = 286
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHVIPLSV 86
VV + I A + E L E + I N + K+VVG T S
Sbjct: 41 IVVAAKDIPAHTEIKEEMLVERTLPGDAIPPNALRVNKKEVVGKWTNDGQPITEN---SY 97
Query: 87 LHRPYVISRGA 97
L + V+ +
Sbjct: 98 LFKNKVVKKED 108
>gi|297242988|ref|ZP_06926926.1| hypothetical protein GVAMD_1000 [Gardnerella vaginalis AMD]
gi|296889199|gb|EFH27933.1| hypothetical protein GVAMD_1000 [Gardnerella vaginalis AMD]
Length = 259
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAV-VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
+ L + +L + ++ S + V I G ++ + + ++V +
Sbjct: 32 IIVLCAGMMALLVVSTIIDSQETQVIAVAKHNIQQGSRVSVNDIAYVRVPKHKVFNQALS 91
Query: 63 -SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96
+I +V + I ++L + I +G
Sbjct: 92 NNISANASIVATCEIRKGMPILQTLLSKIPRIPKG 126
>gi|208702085|ref|YP_002267403.1| Flp pilus assembly protein CpaB [Bacillus cereus H3081.97]
gi|208657940|gb|ACI30310.1| Flp pilus assembly protein CpaB [Bacillus cereus H3081.97]
Length = 286
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N + K++VG T
Sbjct: 41 IVVAAKDIPAHTEIKEDMLVERTLPGDAIPPNALRVNKKEIVGKWTNDGQPITEN 95
>gi|206559893|ref|YP_002230657.1| flp type pilus assembly protein [Burkholderia cenocepacia J2315]
gi|198035934|emb|CAR51826.1| flp type pilus assembly protein [Burkholderia cenocepacia J2315]
Length = 301
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V + + A+ VV + + AG+ + LK Q ++ +VG
Sbjct: 34 VAPVAATVATQSVPVVVTTRPLQAGQPIPADALKVQQ--STAAPQGAFADPLQLVGRTPA 91
Query: 74 RVLLPDHVIPLSVL 87
+ + S L
Sbjct: 92 ADIPAQAAVVASAL 105
>gi|253701799|ref|YP_003022988.1| Flp pilus assembly protein CpaB [Geobacter sp. M21]
gi|251776649|gb|ACT19230.1| Flp pilus assembly protein CpaB [Geobacter sp. M21]
Length = 291
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 24/72 (33%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
S A VV + I G + ++LK +I A I+ V V R +
Sbjct: 35 SAKAIQPQRIVVAAADIPIGTAITPAQLKVTSWPKDSIPPGSARDIEAVANRVAIRPITG 94
Query: 79 DHVIPLSVLHRP 90
+ + L
Sbjct: 95 GDAVTEAKLKPR 106
>gi|170734869|ref|YP_001773983.1| Flp pilus assembly protein CpaB [Burkholderia cenocepacia MC0-3]
gi|169820907|gb|ACA95488.1| Flp pilus assembly protein CpaB [Burkholderia cenocepacia MC0-3]
Length = 279
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 25/73 (34%)
Query: 17 LDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVL 76
L S + V S +N GE L +++ + ++ K + G V R L
Sbjct: 28 LVQTSTSSVTSVAVASTDLNLGEPLGPNQIHMVSWPAGSVPTGAFTDTKALEGRVVRTSL 87
Query: 77 LPDHVIPLSVLHR 89
+ S L
Sbjct: 88 ARGEPVIESKLAP 100
>gi|56459660|ref|YP_154941.1| sialic acid synthase [Idiomarina loihiensis L2TR]
gi|56178670|gb|AAV81392.1| Sialic acid synthase [Idiomarina loihiensis L2TR]
Length = 357
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 6/54 (11%), Positives = 16/54 (29%), Gaps = 4/54 (7%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+V + G+V+ + + +Y ++G R +
Sbjct: 306 LVTVNPLKKGQVITADDIAVKRPGGGRSPYDYWK----IIGQQCDRDYQSGDTL 355
>gi|307726634|ref|YP_003909847.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1003]
gi|307587159|gb|ADN60556.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1003]
Length = 365
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 24/93 (25%), Gaps = 2/93 (2%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPD 79
VVP+ + AG L+ S ++ + + + + + +
Sbjct: 52 VHDAVQVVVPARDLPAGTPLSSSDFVSREIQGDLVYDDMIRPDNFEQYRTSHLVKPVRRG 111
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTIST 112
+ + + + I T
Sbjct: 112 LPLRAGDIDALRGRDFSDILPAGQRAVTVEIDT 144
>gi|148557762|ref|YP_001265344.1| SAF domain-containing protein [Sphingomonas wittichii RW1]
gi|148502952|gb|ABQ71206.1| SAF domain [Sphingomonas wittichii RW1]
Length = 332
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 10/102 (9%), Positives = 25/102 (24%), Gaps = 10/102 (9%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVI 82
V + G ++ + + + Y + + G V R + +
Sbjct: 47 EVAVAVRPLPVGTIIGPESFRYQRWPAELVSKTYFIKGESDLAALNGSVVRYAITAGAPV 106
Query: 83 PLSVLHRPYVISRGAK-VRIILTQGNMTISTAGIALSDASIG 123
++ G + M T ++ G
Sbjct: 107 TQ-----GALVKPGDRGFLAAALGPGMRAVTISVSAQSGVAG 143
>gi|258652943|ref|YP_003202099.1| SAF domain-containing protein [Nakamurella multipartita DSM 44233]
gi|258556168|gb|ACV79110.1| SAF domain protein [Nakamurella multipartita DSM 44233]
Length = 224
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 7/102 (6%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV I GEV+ + L ++V + ++ VVG L+ ++ S+
Sbjct: 63 PVVVVKSDIAMGEVIERADLSTVEV-AGGVTAIAGANLDSVVGQRAAVGLMTGTLLQRSM 121
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
L + + + G + G + G+ + GD + V
Sbjct: 122 LTQDHSMPDGMVQVGVAVTGG-RLPAGGV-----TTGDRVQV 157
>gi|302864767|ref|YP_003833404.1| SAF domain-containing protein [Micromonospora aurantiaca ATCC
27029]
gi|302567626|gb|ADL43828.1| SAF domain protein [Micromonospora aurantiaca ATCC 27029]
Length = 222
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Query: 15 LSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDVVGLVTR 73
+ G + + ++ G L L ++V+ ++ A + +V+GL
Sbjct: 46 AAFAVTSVRSTGTYLAVARQVDVGHQLTADDLVPVRVSGGRELQPVPADRMDEVLGLRAA 105
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAK 98
L P ++ + L ++ G +
Sbjct: 106 VRLTPGTLLTPAQLTEAPLLGPGQQ 130
>gi|197295152|ref|YP_002153693.1| putative flp type pilus assembly protein [Burkholderia cenocepacia
J2315]
gi|195944631|emb|CAR57235.1| putative flp type pilus assembly protein [Burkholderia cenocepacia
J2315]
Length = 279
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
V + +N GE L +++ + + ++ K + G V R L + S L
Sbjct: 39 VAVATTDLNLGEPLGPNQIHMVSWPSGSVPTGAFTDTKALEGRVVRTSLSRGEPVIESKL 98
Query: 88 HRPYVISRGAKVRIILTQGNMTISTAG 114
+ + ++ G+ I+
Sbjct: 99 AP---VGTKGGLSAVIADGSRAITVRV 122
>gi|254252521|ref|ZP_04945839.1| Flp pilus assembly protein CpaB [Burkholderia dolosa AUO158]
gi|124895130|gb|EAY69010.1| Flp pilus assembly protein CpaB [Burkholderia dolosa AUO158]
Length = 308
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
V+ + + AG+ + LK ++I + +VVG V + + I
Sbjct: 47 PFVIATRTLPAGQPIAADALKVQS--TTSIPAGAFANPGEVVGRVPAKDIAASSPIVA 102
>gi|145219385|ref|YP_001130094.1| SAF domain-containing protein [Prosthecochloris vibrioformis DSM
265]
gi|145205549|gb|ABP36592.1| SAF domain protein [Chlorobium phaeovibrioides DSM 265]
Length = 262
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 25/63 (39%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
V+ + I G+ + ++K + ++I +VVG + R ++P + L
Sbjct: 35 VVIVAQPIELGKAITTEQIKTVNWPGADIPQGAVSKATEVVGRIARVSMMPGEPVLPGKL 94
Query: 88 HRP 90
Sbjct: 95 APK 97
>gi|228938208|ref|ZP_04100823.1| hypothetical protein bthur0008_8760 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228971086|ref|ZP_04131719.1| hypothetical protein bthur0003_8680 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228788609|gb|EEM36555.1| hypothetical protein bthur0003_8680 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228821441|gb|EEM67451.1| hypothetical protein bthur0008_8760 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 286
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGLVTRRVLLPDHV 81
VV + I A + E L E + I N S K+V+G T
Sbjct: 41 IVVAAKDIPAHTEIKEDMLVERTLPGDGIPPNALRVSKKEVIGKWTNDGQPITEN 95
>gi|70734200|ref|YP_257840.1| hypothetical protein PFL_0698 [Pseudomonas fluorescens Pf-5]
gi|68348499|gb|AAY96105.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 311
Score = 36.1 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 32/120 (26%), Gaps = 8/120 (6%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL 70
S+ + S VV + L L + +I VG
Sbjct: 43 SVVEPTTTSAEDQTRQPVVVLVRDVPPFVPLAADDLALEK--LRTAPAGSLSAISQAVGR 100
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
R L + ++R I + + ++ + + + GD + V
Sbjct: 101 TPWRQLNAGTWLNEQSFSTGGALAR----MIHSDERALAVAVDEVIGAAGQLSPGDYVDV 156
>gi|317489770|ref|ZP_07948269.1| flp pilus assembly protein CpaB [Eggerthella sp. 1_3_56FAA]
gi|316911116|gb|EFV32726.1| flp pilus assembly protein CpaB [Eggerthella sp. 1_3_56FAA]
Length = 306
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 39/136 (28%), Gaps = 14/136 (10%)
Query: 10 FSLYVLSLDSLFASVIG-HAVVPSVVINAGEVLNESRLKEMQVT-----NSNIRGNYAHS 63
+S A+ +V + I AG+ + + V S + G +
Sbjct: 101 WSAAASRAAVEHATAGALPTLVAAADIRAGDAITAEAVTVQDVPATYRAASALGGEALDA 160
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG 123
G + + S + G ++ L + T + + G
Sbjct: 161 EGLAAGGRAIVDIPAGTQLSSSFVTG----MGGDRLSAEL-GAGLQAVTLAVDVETGLAG 215
Query: 124 DVIAVKNIDTGVMVSG 139
V+ DT +VS
Sbjct: 216 H---VRPYDTVRIVSA 228
>gi|227496332|ref|ZP_03926623.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
gi|226834133|gb|EEH66516.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
Length = 219
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 36/118 (30%), Gaps = 8/118 (6%)
Query: 11 SLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK----- 65
+L L+L + +V + + AGEVL ++ L ++ + + +
Sbjct: 37 ALVTLTLLRPGPGEVAQVIVTTRQVVAGEVLQDADLARRELPVAALPRTGLADGEVVGTR 96
Query: 66 ---DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ + + +L V+ +V L + + A
Sbjct: 97 AAVTLEEGTVLTTSMTSQSLTSDLLPHERVVQVPVEVGAELARPGAVVDLVAEAPQAG 154
>gi|227494992|ref|ZP_03925308.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
gi|226831444|gb|EEH63827.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
Length = 211
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 19/159 (11%), Positives = 46/159 (28%), Gaps = 18/159 (11%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN---IRGNYAH 62
FL+ S+ + +L A + I AG+++ S LK + +R
Sbjct: 30 FLIIISISLTTLLINKARGGQEYYEATKDIPAGQIITLSDLKVISARVDGDAYLRAGQLT 89
Query: 63 SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRI-ILTQGNMTISTAGIALSDA- 120
+ + +LP + I +I + + + +
Sbjct: 90 ENTLTTRTINKGEMLPKAALVKENSQAYRQIVINVTPKIPTSVKVGSKVELWVVPEENGN 149
Query: 121 --------SIGDVIAVKNI--DTGVMVSGSVVDTGTVRV 149
+ + + V N+ +++ V +
Sbjct: 150 SPEPNKAQRLSEQVIVYNLPESQNRILTERAQA---VEI 185
>gi|255714166|ref|XP_002553365.1| KLTH0D15070p [Lachancea thermotolerans]
gi|238934745|emb|CAR22927.1| KLTH0D15070p [Lachancea thermotolerans]
Length = 2050
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 34/117 (29%), Gaps = 11/117 (9%)
Query: 31 PSVVINAGEV-LNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHR 89
P I GEV + + E N ++ G + V+ + +
Sbjct: 1281 PKNPIQGGEVTITAKDIAEFTHAIGNKCEDFVSRP----GRKLLAPMDFAIVVGWRAIIK 1336
Query: 90 --PYVISRGAKVRIILTQGNMTISTAGIALSDA---SIGDVIA-VKNIDTGVMVSGS 140
G ++++ + L + S VI V N +G +V
Sbjct: 1337 AIFPKTVDGDLLKLVHMSNGYRMIPGAEPLQEGDVISSNAVIKSVVNQPSGKIVEVI 1393
>gi|228950016|ref|ZP_04112204.1| hypothetical protein bthur0007_60880 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228809663|gb|EEM56096.1| hypothetical protein bthur0007_60880 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 286
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIKDVVGL 70
VV + I A + E L E + I N S +DVVG
Sbjct: 41 IVVAAKDIPAHTEIKEDMLVERTLPGDAIPPNALRVSKRDVVGK 84
>gi|329890997|ref|ZP_08269340.1| flp pilus assembly protein CpaB [Brevundimonas diminuta ATCC
11568]
gi|328846298|gb|EGF95862.1| flp pilus assembly protein CpaB [Brevundimonas diminuta ATCC
11568]
Length = 310
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 4/39 (10%), Positives = 12/39 (30%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ +V + + G L ++ L + +
Sbjct: 45 MAKVLVAARDLEPGRRLVDADLSWKDWPADELNPLFITD 83
>gi|302038298|ref|YP_003798620.1| putative n-acetylneuraminate synthase [Candidatus Nitrospira
defluvii]
gi|300606362|emb|CBK42695.1| putative N-acetylneuraminate synthase [Candidatus Nitrospira
defluvii]
Length = 348
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
+ +VV V I G V+ + + ++ + A +K V+G V + + D
Sbjct: 282 VAWARESVVSEVAIPRGTVITPTMV-WVKRPSPGPGAVAAKDLKKVIGKVAKTDIPKDSQ 340
Query: 82 IPLSVLHR 89
I L+
Sbjct: 341 IRWEQLNA 348
>gi|158313204|ref|YP_001505712.1| SAF domain-containing protein [Frankia sp. EAN1pec]
gi|158108609|gb|ABW10806.1| SAF domain protein [Frankia sp. EAN1pec]
Length = 221
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 14/112 (12%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIR---GNYAHSIKDVVGLVTRRVLLPDHVI 82
AVV + +N GE++ L +V+ + + + +VG L ++
Sbjct: 55 ADAVVLTRPLNRGELIETGDLAIARVSVEGTGVRLASPQAARESLVGRQALLDLPAGTLV 114
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVKNID 132
+ + A+V + A AL A I GD + V D
Sbjct: 115 TPEMAGSALPPAGLARVGL---------RLAPEALPSAQIQPGDWVQVVYPD 157
>gi|296284551|ref|ZP_06862549.1| Flp pilus assembly protein CpaB [Citromicrobium bathyomarinum
JL354]
Length = 353
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 11/94 (11%)
Query: 8 LFFSLYVLSLDSLFASVIGHA-------VVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ S++ + A+ G +V + G ++ + + +R Y
Sbjct: 22 IARSMFAGASAPEVAAATGPVEPTGPRVLVAQRSLPVGTIITQDAISYQAWPQELVRDAY 81
Query: 61 A----HSIKDVVGLVTRRVLLPDHVIPLSVLHRP 90
+ ++G V R + + L P
Sbjct: 82 FIDGEADVSKLLGTVVRYQITAGEPVTQGALVAP 115
>gi|89053489|ref|YP_508940.1| Flp pilus assembly CpaB [Jannaschia sp. CCS1]
gi|88863038|gb|ABD53915.1| Flp pilus assembly CpaB [Jannaschia sp. CCS1]
Length = 274
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 34/118 (28%), Gaps = 7/118 (5%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV-----VGLVTRRVLLPD 79
+V S + GE + ++ ++ ++ ++ ++ G T ++
Sbjct: 44 TVELIVVSRQLRYGEQITPDDVQLIRWPAEHVPFGAFTTMDELFPPDEEGARTVLRMMEQ 103
Query: 80 HVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAVKNIDTGV 135
L V G R+ + + + GD + V G
Sbjct: 104 DEPILLVKVTAPGEDAGVASRLEAGMRAIALRVDVNSGVSGFLRPGDRVDVYWTGPGR 161
>gi|107022593|ref|YP_620920.1| Flp pilus assembly CpaB [Burkholderia cenocepacia AU 1054]
gi|116689542|ref|YP_835165.1| Flp pilus assembly CpaB [Burkholderia cenocepacia HI2424]
gi|170732846|ref|YP_001764793.1| Flp pilus assembly protein CpaB [Burkholderia cenocepacia MC0-3]
gi|105892782|gb|ABF75947.1| Flp pilus assembly CpaB [Burkholderia cenocepacia AU 1054]
gi|116647631|gb|ABK08272.1| Flp pilus assembly CpaB [Burkholderia cenocepacia HI2424]
gi|169816088|gb|ACA90671.1| Flp pilus assembly protein CpaB [Burkholderia cenocepacia MC0-3]
Length = 301
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V + + A+ VV + + AG+ + LK Q ++ +VG +
Sbjct: 34 VAPVAATVATQSVPVVVTTRPLQAGQPIPAEALKVQQ--STAAPQGAFADPLQLVGRIPA 91
Query: 74 RVLLPDHVIPLSVL 87
+ + S L
Sbjct: 92 ADIPAQAAVVASAL 105
>gi|223982946|ref|ZP_03633158.1| hypothetical protein HOLDEFILI_00437 [Holdemania filiformis DSM
12042]
gi|223965107|gb|EEF69407.1| hypothetical protein HOLDEFILI_00437 [Holdemania filiformis DSM
12042]
Length = 266
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 5/48 (10%), Positives = 17/48 (35%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
V + + +G V+ ++ ++V + + ++G
Sbjct: 47 IPVAARYLKSGTVIQREDIQMIEVPRPVVLEGVEKDPELLLGQAVDTY 94
>gi|83954513|ref|ZP_00963224.1| CpaB family protein [Sulfitobacter sp. NAS-14.1]
gi|83840797|gb|EAP79968.1| CpaB family protein [Sulfitobacter sp. NAS-14.1]
Length = 287
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 29/109 (26%), Gaps = 9/109 (8%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG------LVTRRVLLPDHV 81
V + + G+ L +++++ I + V R + D
Sbjct: 50 VYVANGPLKYGQRLTREDVRQVKWPEDAIPEGTFIEEAALFPENSDDLRVVLRAMEKDEA 109
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAV 128
I + + G ++ I + GD + V
Sbjct: 110 IMAAKVTE-PGADTGLTSQLERGSRAFAIRVDVSSGVSGFLRPGDRVDV 157
>gi|315655932|ref|ZP_07908830.1| hypothetical protein HMPREF0388_1726 [Mobiluncus curtisii ATCC
51333]
gi|315489996|gb|EFU79623.1| hypothetical protein HMPREF0388_1726 [Mobiluncus curtisii ATCC
51333]
Length = 187
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 34/97 (35%), Gaps = 1/97 (1%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
++ + V+ + + + G +V + AG + ++ + G Y +
Sbjct: 1 MILAVILVIMTVRVTSHLEG-YLVAKTTLVAGHTVQSGDIEVISANPGRAAGQYLREGEL 59
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIIL 103
G V + + +IP + L + + + +
Sbjct: 60 QEGSVVVQTIAGGQLIPKASLSQTEPFRKRIVLNLAA 96
>gi|300858083|ref|YP_003783066.1| hypothetical protein cpfrc_00665 [Corynebacterium
pseudotuberculosis FRC41]
gi|300685537|gb|ADK28459.1| putative secreted protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302205806|gb|ADL10148.1| Putative secreted protein [Corynebacterium pseudotuberculosis C231]
gi|302330365|gb|ADL20559.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
1002]
gi|308276041|gb|ADO25940.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
I19]
Length = 250
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 18/55 (32%)
Query: 32 SVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
I+ GEV+ E L+ + + + +D+ R P S
Sbjct: 50 RRDIHLGEVITEKDLQAFSIPTHLLPNHAITQEEDIRFSYQRDNAHPHAAPSPSQ 104
>gi|82703478|ref|YP_413044.1| Flp pilus assembly CpaB [Nitrosospira multiformis ATCC 25196]
gi|82411543|gb|ABB75652.1| Flp pilus assembly CpaB [Nitrosospira multiformis ATCC 25196]
Length = 261
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 20/65 (30%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
+V S I+ G L L+ + + K + V + L+ + +
Sbjct: 29 ATVIVASRDIDVGTRLTPDMLQPSDWPRATVPEGSFQDAKLLDTRVVKVNLVRGEPLLEA 88
Query: 86 VLHRP 90
L
Sbjct: 89 KLAPQ 93
>gi|289641009|ref|ZP_06473178.1| SAF domain protein [Frankia symbiont of Datisca glomerata]
gi|289509129|gb|EFD30059.1| SAF domain protein [Frankia symbiont of Datisca glomerata]
Length = 271
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQ---VTNSNIRGNYAHSIKDVVGLVT 72
+ A + VV + + AG V+ + L + + R ++VG
Sbjct: 56 ARLFATADRSQNWVVAAADLPAGHVVVAADLTTASAHLRSTTAARYFPGERRSELVGATL 115
Query: 73 RRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQG 106
R + + + + V I++ G
Sbjct: 116 ARPVSAGELFSGADFVLD-DVRPTRLVSIVVKDG 148
>gi|218670668|ref|ZP_03520339.1| Flp pilus assembly protein CpaB [Rhizobium etli GR56]
Length = 133
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 30/102 (29%), Gaps = 12/102 (11%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + + G+ + L+ + ++ SI+ VVG +
Sbjct: 24 TLVVAAKPMRFGDRIRSENLRAIPWPSNETPAGSFVSIEAVVGNEAQP------------ 71
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
+ I G V G +T AL I V
Sbjct: 72 RYAMAAIDPGEPVLSSKITGTGERATLSAALDQGMKAVSIRV 113
>gi|330816714|ref|YP_004360419.1| Flp pilus assembly CpaB [Burkholderia gladioli BSR3]
gi|327369107|gb|AEA60463.1| Flp pilus assembly CpaB [Burkholderia gladioli BSR3]
Length = 305
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + + G+ + LK Q + + +VG V + + S
Sbjct: 48 PVVVAARPLKGGQPIPADGLKVQQ--AAALPEGAFADPVQIVGRVPIADVPEQAAVLESS 105
Query: 87 L 87
L
Sbjct: 106 L 106
>gi|197117447|ref|YP_002137874.1| Flp pilus assembly protein CpaB [Geobacter bemidjiensis Bem]
gi|197086807|gb|ACH38078.1| Flp pilus assembly protein CpaB [Geobacter bemidjiensis Bem]
Length = 291
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 26/72 (36%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
S A+ VV +V I G + ++LK +I A I+ V V R +
Sbjct: 35 SAKAAQPQRIVVAAVDIPIGTAITPAQLKVASWPKDSIPPGSARGIEAVANRVAIRPITG 94
Query: 79 DHVIPLSVLHRP 90
+ + L
Sbjct: 95 GDAVTEAKLKPR 106
>gi|299532818|ref|ZP_07046205.1| putative signal peptide protein, CpaB like protein [Comamonas
testosteroni S44]
gi|298719042|gb|EFI60012.1| putative signal peptide protein, CpaB like protein [Comamonas
testosteroni S44]
Length = 329
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
VV + I AG+ L L+ Q+ I+ VG V + + +
Sbjct: 52 VVVAAQAIPAGQALKTEDLQLTQLPAK--PDGAYGEIQAAVGSVPAVDVPKGAPVLQGQM 109
>gi|87301557|ref|ZP_01084397.1| hypothetical protein WH5701_02744 [Synechococcus sp. WH 5701]
gi|87283774|gb|EAQ75728.1| hypothetical protein WH5701_02744 [Synechococcus sp. WH 5701]
Length = 300
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 50/142 (35%), Gaps = 9/142 (6%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
F + + ++ + A+VP V + GE L + L Q +R A
Sbjct: 6 FNFLATAPLALTLAIGPAASAQALVPYVYVPKGEELEAAGLGIAQAATRLLRLGQADDAA 65
Query: 66 DVVGLVTR---RVLLPDHVIPLSVLHRPYVISRGAKV----RIILTQGNMTISTAGIALS 118
+ GL + ++ + L + + G + ++ + + +AL
Sbjct: 66 RLAGLTVQLLPNDPRGWVLLAEAQLRSNQIKAAGQSLARAKQLDPRNPGIWFAEGSLALR 125
Query: 119 DASIGDVIAVKNIDTGVMVSGS 140
D G I + ++TG+ G
Sbjct: 126 DGQPGQAIGL--LETGLKFDGK 145
>gi|313106824|ref|ZP_07793036.1| putative pilus assembly protein [Pseudomonas aeruginosa 39016]
gi|310879538|gb|EFQ38132.1| putative pilus assembly protein [Pseudomonas aeruginosa 39016]
Length = 299
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 33/105 (31%), Gaps = 8/105 (7%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V S + A V+ + L + + ++G + ++ +
Sbjct: 53 PVLVASRDLPALAVIGKDDLSVER--LRTAPVGSYDRPEALLGKRVWVAVPAGSILSAAT 110
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK 129
L ++R I + M I+ + + GD + V
Sbjct: 111 LEPGGPLAR----TIRPDERAMAIAVDEVVGGGGFVLPGDYVDVM 151
>gi|156542518|ref|XP_001600478.1| PREDICTED: similar to dynein heavy chain [Nasonia vitripennis]
Length = 4476
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 7/73 (9%), Positives = 17/73 (23%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
I +V + + G+ L M+ V + + V
Sbjct: 2036 RAIKSVLVVAGKLKRGDRLRPEDQVLMRALRDFNTPKIVTDDVPVFMGLIGDLFPALDVP 2095
Query: 83 PLSVLHRPYVISR 95
+ + +
Sbjct: 2096 RKRDMEFEKAVRQ 2108
>gi|118581114|ref|YP_902364.1| SAF domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118503824|gb|ABL00307.1| SAF domain protein [Pelobacter propionicus DSM 2379]
Length = 291
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
VV S I G LN + LK M ++I K ++ ++ R + P + + L
Sbjct: 44 IVVASADIPVGSKLNTTHLKMMAWPATSIPPGSFTDTKALIDRISIRPIGPGEPLTEAKL 103
Query: 88 HRP 90
Sbjct: 104 MPR 106
>gi|257790321|ref|YP_003180927.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243]
gi|325830034|ref|ZP_08163491.1| Flp pilus assembly protein CpaB [Eggerthella sp. HGA1]
gi|257474218|gb|ACV54538.1| Flp pilus assembly protein CpaB [Eggerthella lenta DSM 2243]
gi|325487501|gb|EGC89939.1| Flp pilus assembly protein CpaB [Eggerthella sp. HGA1]
Length = 306
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 35/131 (26%), Gaps = 4/131 (3%)
Query: 10 FSLYVLSLDSLFASVIG-HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
+S A+ +V + I AG+ + + V + +
Sbjct: 101 WSAAASRAAVEHATAGALPTLVAAADIRAGDAITAEAVTVQDVPATYRAASALGGEALDA 160
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
+ + + L +V G + T + + G V
Sbjct: 161 EGLAAGGRAIVDIPAGTQLSSSFVTGMGGDRLSAELGAGLQAVTLAVDVETGLAGH---V 217
Query: 129 KNIDTGVMVSG 139
+ DT +VS
Sbjct: 218 RPYDTVRIVSA 228
>gi|149189201|ref|ZP_01867488.1| sialic acid synthase [Vibrio shilonii AK1]
gi|148836955|gb|EDL53905.1| sialic acid synthase [Vibrio shilonii AK1]
Length = 751
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
VV V I G+V+ E L + + ++V V R + + + S +
Sbjct: 406 VVADVNIKKGDVITEEMLAIKSPGKGLAP----YKLSELVNRVAVRDIPKNDFLYQSDID 461
Query: 89 RPYVISRGAKVRIIL 103
V ++ K+ +
Sbjct: 462 GNVVQAQKYKLPLKY 476
>gi|120602160|ref|YP_966560.1| SAF domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120562389|gb|ABM28133.1| SAF domain [Desulfovibrio vulgaris DP4]
Length = 272
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 28/83 (33%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
VV +V + G + +LK +++ K +VG V + VI + L
Sbjct: 45 VVSAVDMEKGAKIRADQLKTSTFLSASAPPGGFTDAKSLVGRVLATPVTTGEVITETRLL 104
Query: 89 RPYVISRGAKVRIILTQGNMTIS 111
S G I + +
Sbjct: 105 PADATSGGVSTMIAPGMRAVAVK 127
>gi|78358296|ref|YP_389745.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220701|gb|ABB40050.1| N-acetylneuraminate synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 351
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLH 88
VV I AG++L++ + ++ + A + V+G V +R L + +
Sbjct: 294 VVAIRDIRAGDILSKDNI-WVKRPGT--GEILARDYERVLGRVAKRPLQKNAQLAWDDFD 350
>gi|194434897|ref|ZP_03067143.1| P-hydroxybenzoic acid efflux pump subunit AaeA [Shigella
dysenteriae 1012]
gi|194416873|gb|EDX32996.1| P-hydroxybenzoic acid efflux pump subunit AaeA [Shigella
dysenteriae 1012]
gi|332086516|gb|EGI91663.1| hypothetical protein SD15574_3784 [Shigella dysenteriae 155-74]
Length = 250
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 12/107 (11%), Positives = 35/107 (32%), Gaps = 2/107 (1%)
Query: 39 EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK 98
E ++++ V + + + + T D + ++ I+RG+
Sbjct: 62 EEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGST 121
Query: 99 VRIILTQGNMTISTAGI--ALSDASIGDVIAVKNIDTGVMVSGSVVD 143
++ Q + + L G + + + ++ G+V
Sbjct: 122 AVALVKQNSFYVLAYMEETKLEGGRPGYRAEITPLGSNKVLKGTVDS 168
>gi|317403406|gb|EFV83919.1| flp pilus assembly protein CpaB [Achromobacter xylosoxidans C54]
Length = 279
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 16/66 (24%), Gaps = 2/66 (3%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA--HSIKDVVGLVTRRVLLP 78
+ +V + + AG L + L + V+G L
Sbjct: 46 HREAMVSRLVAARDLPAGTELTPAHLAIRDIPAQWAPAASIEPRDGDSVLGTRLGLALAQ 105
Query: 79 DHVIPL 84
+
Sbjct: 106 GDPVLS 111
>gi|323529160|ref|YP_004231312.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1001]
gi|323386162|gb|ADX58252.1| Flp pilus assembly protein CpaB [Burkholderia sp. CCGE1001]
Length = 363
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 7/64 (10%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPDHVIPLS 85
VVP+ + AG L+ S ++ + + + + + + +
Sbjct: 58 VVVPARDLPAGTPLSSSDFVSREIQGDLVYDDMVRPENFDQYRASHLVKPVRRGLPLRAA 117
Query: 86 VLHR 89
+
Sbjct: 118 DIDA 121
>gi|319791193|ref|YP_004152833.1| flp pilus assembly protein cpab [Variovorax paradoxus EPS]
gi|315593656|gb|ADU34722.1| Flp pilus assembly protein CpaB [Variovorax paradoxus EPS]
Length = 319
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 20/70 (28%), Gaps = 2/70 (2%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPDHVIPL 84
VV + + G + + + + V N + + + G + +
Sbjct: 59 DVVVANRALGDGTTVLPTMVAKRSVPNEYVHNDAITPETFSQFAGRQLSVPVAAGKPLLA 118
Query: 85 SVLHRPYVIS 94
S P +
Sbjct: 119 SFFSAPRKVF 128
>gi|319653978|ref|ZP_08008071.1| hypothetical protein HMPREF1013_04690 [Bacillus sp. 2_A_57_CT2]
gi|317394300|gb|EFV75045.1| hypothetical protein HMPREF1013_04690 [Bacillus sp. 2_A_57_CT2]
Length = 221
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 31/84 (36%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
++ LD + V+ VI V+ + Q+ N + ++ DVV
Sbjct: 20 MGAVAANELDLFKSLTTTQVVMAKDVIEKDTVITNENVWIFQMPNELVTDEMYRNVNDVV 79
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYV 92
G +V+LP + L + +
Sbjct: 80 GKTATQVILPSQYVSAKALDQSLL 103
>gi|312621778|ref|YP_004023391.1| SAF domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202245|gb|ADQ45572.1| SAF domain protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 209
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 2/81 (2%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
L F Y+L+ +V I AG + +L +V + A +
Sbjct: 19 LAFGEYYLLTNI-ANKPQYQLIIVAKQDIPAGAQITLDKLSVARVDI-QTPIHAAKTRNQ 76
Query: 67 VVGLVTRRVLLPDHVIPLSVL 87
++G + I L
Sbjct: 77 ILGKYALYDIKAGEPIIPEHL 97
>gi|226365103|ref|YP_002782886.1| hypothetical protein ROP_56940 [Rhodococcus opacus B4]
gi|226243593|dbj|BAH53941.1| hypothetical protein [Rhodococcus opacus B4]
Length = 227
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 6/50 (12%), Positives = 19/50 (38%)
Query: 34 VINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
+ G VL ++ ++ +++ ++ ++ DV G +
Sbjct: 66 DLQPGVVLTKADVELVELEAGSLPDGAVTAVADVDGRTLAGPTRAGETLT 115
>gi|256833186|ref|YP_003161913.1| SAF domain-containing protein [Jonesia denitrificans DSM 20603]
gi|256686717|gb|ACV09610.1| SAF domain protein [Jonesia denitrificans DSM 20603]
Length = 221
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 22 ASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHV 81
A+ + V + + AGEV+ + + V +VVG R + V
Sbjct: 42 ATTVVEVPVATRPLAAGEVVMAQDVSFVSVEVLGSPAVSFAG-DEVVGAHVRVGVGLGEV 100
Query: 82 IPLSVLHRPYVISRG-AKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDT 133
+ +VL + G A V + + ++ LS ++GD +AV D+
Sbjct: 101 LSGAVLTQSPAPPDGFATVSVSVANPSV--------LSVVAVGDHVAVVPRDS 145
>gi|116052339|ref|YP_792650.1| putative pilus assembly protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|115587560|gb|ABJ13575.1| putative pilus assembly protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 303
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 33/105 (31%), Gaps = 8/105 (7%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V S + A V+ + L + + ++G + ++ +
Sbjct: 57 PVLVASRDLPALAVIGKDDLSVER--LRTAPVGSYDRPEALLGKRVWVAVPAGSILSAAT 114
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK 129
L ++R I + M I+ + + GD + V
Sbjct: 115 LEPGGPLAR----TIRPDERAMAIAVDEVVGGGGFVLPGDYVDVM 155
>gi|307721766|ref|YP_003892906.1| SAF domain-containing protein [Sulfurimonas autotrophica DSM 16294]
gi|306979859|gb|ADN09894.1| SAF domain protein [Sulfurimonas autotrophica DSM 16294]
Length = 292
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
V + + G++L+ +K+ ++ S I +++ R + D I L
Sbjct: 43 EVFVAAKNLKKGDLLDAGSIKKAKLPKSYISFTPLTD-SEIISHYARVNIYKDEPIRLEK 101
Query: 87 LHRPYVISR 95
+ + +
Sbjct: 102 ISALKPVEK 110
>gi|197106488|ref|YP_002131865.1| Flp pilus assembly protein CpaB [Phenylobacterium zucineum HLK1]
gi|196479908|gb|ACG79436.1| Flp pilus assembly protein CpaB [Phenylobacterium zucineum HLK1]
Length = 310
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 31/109 (28%), Gaps = 7/109 (6%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + I G+ L L + + ++ V+ + +
Sbjct: 46 PVVVAAREIKYGDKLVPGMLTIVNAPAGLVPQGAFQTVDQVLSADKGGPPVALTRLAARE 105
Query: 87 -LHRPYVISRGAKVRIILTQG------NMTISTAGIALSDASIGDVIAV 128
+ + G++ + G + + + A GD + V
Sbjct: 106 PVLPTKISGPGSRPTVSAEVGEGMRAYTLKVDASSGVGGHALPGDRVDV 154
>gi|146276365|ref|YP_001166524.1| Flp pilus assembly protein CpaB-like protein [Rhodobacter
sphaeroides ATCC 17025]
gi|145554606|gb|ABP69219.1| Flp pilus assembly protein CpaB-like protein [Rhodobacter
sphaeroides ATCC 17025]
Length = 274
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 30/108 (27%), Gaps = 4/108 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL--VTRRVLLPDHVI 82
+ V + +N G L+ ++++ + + + R VL
Sbjct: 47 MVEVFVTNKPLNYGAPLSREDVQKILWPANALPETIFKDETALFPETGKPRYVLRQMEKF 106
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAV 128
+ + A +R+ I + GD + V
Sbjct: 107 EPVLAVKVTEPGVEAGLRLASGMRAFAIKVDVASGVSGFLQPGDRVDV 154
>gi|269966891|ref|ZP_06180964.1| putative pilus assembly protein [Vibrio alginolyticus 40B]
gi|269828558|gb|EEZ82819.1| putative pilus assembly protein [Vibrio alginolyticus 40B]
Length = 251
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 33/109 (30%), Gaps = 3/109 (2%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V ++ + G +L+E L + I + +G + + ++
Sbjct: 45 PVLVAAMELEPGTILSEKHLSTKLMEVDWIDDETLKVKEQALGRIVANTIYAGELVNP-H 103
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVKNIDT 133
I + +TI + + G+ + V N +
Sbjct: 104 RLALPGEGATLAALIPENKRAITIRVNDVIGVAGFLLPGNKVDVLNTVS 152
>gi|226315004|ref|YP_002774900.1| hypothetical protein BBR47_54190 [Brevibacillus brevis NBRC 100599]
gi|226097954|dbj|BAH46396.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 1506
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLH-RPYVISRGAKVRIILTQGNMTISTAGIALSDASI 122
+ V + ++ ++ + + + ++ G AL+
Sbjct: 346 KEHYQFYVQYNNTPLVSDLKVNDTPLNDPNVNTNPTYITVPSLNRLNLNMDGKALNA--- 402
Query: 123 GDVIAVKNIDTGVMVSGSVVDTGT 146
D + VKN+ TG +V V TG+
Sbjct: 403 -DTVEVKNLRTGDVVKTQVNRTGS 425
>gi|226349288|ref|YP_002776402.1| hypothetical membrane protein [Rhodococcus opacus B4]
gi|226245203|dbj|BAH55550.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 235
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 36/107 (33%), Gaps = 7/107 (6%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDVVGLVTRRVLLPDHV 81
+V + + GE + L V + A VVG+ L V
Sbjct: 69 RATTDVLVLTNEVQQGETIESKDLAAKSVNVDADLGALPASERGRVVGMSASTRLPAGTV 128
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
+ S + + G + ++ +T+S + + GD++ V
Sbjct: 129 LLPSAITDQ--VVPGEGLTMV----GITVSYSHLPSEPIVPGDMVRV 169
>gi|332163125|ref|YP_004299702.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|325667355|gb|ADZ43999.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330863505|emb|CBX73622.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Yersinia
enterocolitica W22703]
Length = 311
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 2/107 (1%)
Query: 39 EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK 98
E +++S V + + + + T + + +H I+RGA
Sbjct: 122 EEIDQSSNVLQTVRHQLAKAVAVRDLAKLDLERTTVRAPAEGWVTNLNVHAGEFINRGAT 181
Query: 99 VRIILTQGNMTISTAGI--ALSDASIGDVIAVKNIDTGVMVSGSVVD 143
++ + I L GD + + + ++ G+V
Sbjct: 182 AVALVKKDTFYILAYLEETKLEGVKPGDRAEITPLGSNRILHGTVDS 228
>gi|237718671|ref|ZP_04549152.1| N-acetylneuraminate synthase [Bacteroides sp. 2_2_4]
gi|229452131|gb|EEO57922.1| N-acetylneuraminate synthase [Bacteroides sp. 2_2_4]
Length = 335
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 29 VVPSVVINAGEVLNESRLKEMQ 50
+V + I GE+L E L +
Sbjct: 284 IVAARPIKKGELLTEDNLTVKR 305
>gi|217978827|ref|YP_002362974.1| Flp pilus assembly protein CpaB [Methylocella silvestris BL2]
gi|217504203|gb|ACK51612.1| Flp pilus assembly protein CpaB [Methylocella silvestris BL2]
Length = 338
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 21/137 (15%)
Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS----IKDVVGLVTRRVLLPDHVIPLSV 86
+ I AGE+L + V + ++ + G +TRR + S
Sbjct: 53 ATRAIPAGELLRSDDIGWKNVGAAGVQAGNLLRGQVAETEFFGAITRRDFAAGEGLIASD 112
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS----IGDVIAVKNIDT--------G 134
L +P + +L G +S + A A+ GD + V
Sbjct: 113 LVKPNDRR---FLAAVLKPGRRALSVSVDAAQSAAGLVLPGDYVDVILTQDFGDKIDIGR 169
Query: 135 VMVSGSVVDTGTVRVVV 151
VS +V+ VRV+
Sbjct: 170 RTVSETVLWN--VRVIA 184
>gi|111026111|ref|YP_708394.1| hypothetical protein RHA1_ro10043 [Rhodococcus jostii RHA1]
gi|110824954|gb|ABH00236.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 235
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 36/107 (33%), Gaps = 7/107 (6%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSN-IRGNYAHSIKDVVGLVTRRVLLPDHV 81
+V + + GE + L V + A VVG+ L V
Sbjct: 69 RATTDVLVLTNEVQQGETIESKDLAAKSVNVDADLGALPASERGRVVGMSASTRLPAGTV 128
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
+ S + + G + ++ +T+S + + GD++ V
Sbjct: 129 LLPSAITDQ--VVPGEGLTMV----GITVSYSHLPSEPIVPGDMVRV 169
>gi|308050060|ref|YP_003913626.1| Flp pilus assembly protein CpaB [Ferrimonas balearica DSM 9799]
gi|307632250|gb|ADN76552.1| Flp pilus assembly protein CpaB [Ferrimonas balearica DSM 9799]
Length = 288
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 23/65 (35%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
+ ++ + +G ++ E L V + + VVG+V + L+ +
Sbjct: 38 QPVMTMAISVPSGTIIQEKHLVLKSVPPGLVPDEVLSKPEQVVGMVAKFPLVEGDFLSRQ 97
Query: 86 VLHRP 90
L
Sbjct: 98 KLVPK 102
>gi|298253092|ref|ZP_06976884.1| hypothetical protein GV51_0271 [Gardnerella vaginalis 5-1]
gi|297532487|gb|EFH71373.1| hypothetical protein GV51_0271 [Gardnerella vaginalis 5-1]
Length = 284
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 33/95 (34%), Gaps = 2/95 (2%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAV-VPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH 62
+ L + +L + ++ S + V I G ++ + + ++V +
Sbjct: 57 IIVLCAGMMALLVVSTIIDSQETQVIAVAKHNIQQGSRVSVNDIAYVRVPKHKVFNQALS 116
Query: 63 -SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG 96
+I ++ + I ++L + I G
Sbjct: 117 NNISANASIIATCEIRKGMPILQTLLSKIPRIPEG 151
>gi|114797097|ref|YP_759868.1| putative Flp pilus assembly protein CpaB [Hyphomonas neptunium ATCC
15444]
gi|114737271|gb|ABI75396.1| putative Flp pilus assembly protein CpaB [Hyphomonas neptunium ATCC
15444]
Length = 295
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 37/111 (33%), Gaps = 12/111 (10%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGL-VTRRVLLPDHVIP 83
+ V I G++++ S ++ S + ++ D+ +R +++ +
Sbjct: 45 MTQIAVARATIEPGKLIDASMVEMRDWPESAVPAGAMRAVTDLGETAYSRGLVVAGEPLL 104
Query: 84 LSVLHRPYVISRGAKVRIILT-QGNMTISTAGIALSDASI-----GDVIAV 128
+ G+ + + Q M + +A GD + V
Sbjct: 105 AEKIDTT-----GSVLTLAANIQPGMRAVSVVVANDTGVAGFVLPGDRVDV 150
>gi|152989266|ref|YP_001350208.1| Flp pilus assembly protein CpaB [Pseudomonas aeruginosa PA7]
gi|150964424|gb|ABR86449.1| Flp pilus assembly protein CpaB [Pseudomonas aeruginosa PA7]
Length = 303
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 32/105 (30%), Gaps = 8/105 (7%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V S + A V+ + L + ++G + ++ +
Sbjct: 57 PVLVASRDLPALAVIGKDDLVVEM--LRTAPAGSYDKPEALLGKRVWVAVPAGSILSAAT 114
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK 129
L ++R I + M I+ + + GD + V
Sbjct: 115 LEPGGPLAR----TIRADERAMAIAVDEVIGGGGFVLPGDYVDVM 155
>gi|27375778|ref|NP_767307.1| CtpC protein [Bradyrhizobium japonicum USDA 110]
gi|27348916|dbj|BAC45932.1| CtpC protein [Bradyrhizobium japonicum USDA 110]
Length = 270
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 33/115 (28%), Gaps = 11/115 (9%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI------KDV 67
+L +V I G+ + L+ + G + +
Sbjct: 31 APALPVAEKLPTVEVLVAKNDIQLGQAVKPEDLQWQSWPAATASGAFIRRDSRPEAQTQI 90
Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMT-ISTAGIALSDAS 121
G + R L+ I L V + G+ + M +ST A + A
Sbjct: 91 AGSIARVPLMQGEPIREQKL----VRAEGSGFMAAILPSGMRAVSTDVTAETSAG 141
>gi|108759025|ref|YP_632818.1| putative Flp pilus assembly protein CpaB [Myxococcus xanthus DK
1622]
gi|108462905|gb|ABF88090.1| putative Flp pilus assembly protein CpaB [Myxococcus xanthus DK
1622]
Length = 271
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPDHVI 82
+ VV + + G V+ + + V + + S +V L +
Sbjct: 39 LVPVVVAAQDVPEGTVITFEMISQRSVPEQFVTSSVVRPDSASYIVNQKVLVALQAGDPL 98
Query: 83 PLSVLHRPYVISR 95
S R
Sbjct: 99 LWSQFETTKAAER 111
>gi|115351455|ref|YP_773294.1| CpaB family Flp pilus assembly protein [Burkholderia ambifaria
AMMD]
gi|115281443|gb|ABI86960.1| Flp pilus assembly protein CpaB family [Burkholderia ambifaria
AMMD]
Length = 301
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
A+ VV + V+ AG+ + LK QV + +VG V
Sbjct: 37 VATPTVAAQSVPLVVAARVLPAGQPIPADALKLAQVPM--MPTGGFSDPTALVGRVPAND 94
Query: 76 LLPDHVIP 83
+L +
Sbjct: 95 ILAAAPVL 102
>gi|269126095|ref|YP_003299465.1| Flp pilus assembly protein CpaB [Thermomonospora curvata DSM 43183]
gi|268311053|gb|ACY97427.1| Flp pilus assembly protein CpaB [Thermomonospora curvata DSM 43183]
Length = 245
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNE----SRLKEMQVTNSNIRGNYAHSIKDV-VGLVTR 73
+L + +V + I AG + + S++ + I+DV +VT
Sbjct: 33 ALRGQRAVNVLVAAKAIPAGTAITRLVADGYAVTRKFPASSVPDDVLSRIEDVDSDMVTG 92
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTA 113
+ P +I +P ++ RG+ + +G + ++
Sbjct: 93 SPVRPGELIR-----KPLLVPRGSSQTFTVPEGKIALTVE 127
>gi|300694112|ref|YP_003750085.1| flp pilus assembly protein precursor (cpab) [Ralstonia solanacearum
PSI07]
gi|299076149|emb|CBJ35462.1| putative Flp pilus assembly protein precursor (CpaB) [Ralstonia
solanacearum PSI07]
Length = 310
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 12/104 (11%), Positives = 29/104 (27%), Gaps = 10/104 (9%)
Query: 7 LLFFSLYVLSLDSLFASV------IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ + + A + VV + AG+ + ++ + + +
Sbjct: 22 AVAWKNAHRPPAPVAAQQNENGKTLYPVVVTVKPLEAGKPITADQVGVESLPIN--PADA 79
Query: 61 AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYV--ISRGAKVRII 102
+ VVG + + S L + G + I
Sbjct: 80 FADVSKVVGREPIVPIGVGVPLIGSQLSSGLALQVVPGQRAVAI 123
>gi|270263274|ref|ZP_06191544.1| p-hydroxybenzoic acid efflux system component [Serratia odorifera
4Rx13]
gi|270042962|gb|EFA16056.1| p-hydroxybenzoic acid efflux system component [Serratia odorifera
4Rx13]
Length = 311
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 14/107 (13%), Positives = 38/107 (35%), Gaps = 2/107 (1%)
Query: 39 EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK 98
E ++++ V + + + + T D + +H I+RG+
Sbjct: 122 EEIDQANNVLQTVQHQLAKAVATRELAQLDLERTTVRAPADGWVTNLNVHSGEYITRGSV 181
Query: 99 VRIILTQGNMTISTAGI--ALSDASIGDVIAVKNIDTGVMVSGSVVD 143
++ + I L+ + GD + + + + ++ G+V
Sbjct: 182 AVALVKKNTFYILAYLEETKLNGLNKGDRVEITPLGSNRIMHGTVDS 228
>gi|28493099|ref|NP_787260.1| hypothetical protein TWT132 [Tropheryma whipplei str. Twist]
gi|28476139|gb|AAO44229.1| unknown [Tropheryma whipplei str. Twist]
Length = 254
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 16/129 (12%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGH-----AVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
R L+ +L S +F + + V + ++ G+ + + ++
Sbjct: 12 RILIGLALIAASFIGVFFVIKTNNSKSQVYVATRPLSIGDKFDAKQFSIVEANLGANLDK 71
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
Y + V R ++P +P S L + V ++ + AG D
Sbjct: 72 YIT-PGSLPNAVFNRPIMPGEFLPKSALVP---VLDKDIVAVV-------LRIAGDLPGD 120
Query: 120 ASIGDVIAV 128
GD++ V
Sbjct: 121 VKEGDLVDV 129
>gi|258512891|ref|YP_003186325.1| Nitrate reductase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479617|gb|ACV59936.1| Nitrate reductase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 677
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 114 GIALSDA-SIGDVIAVKNIDTGVMVSGSVVDTGTVRVV 150
G+A GD + V+N V+ V G RVV
Sbjct: 580 GVAAERGIQDGDWVRVRNKKASVIARARVQAEGHPRVV 617
>gi|291278785|ref|YP_003495620.1| N-acetylneuraminate synthase [Deferribacter desulfuricans SSM1]
gi|290753487|dbj|BAI79864.1| N-acetylneuraminate synthase [Deferribacter desulfuricans SSM1]
Length = 338
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+ +V + GE+L+E L + I +++GL R +I
Sbjct: 276 DIARKYIVAKRDMKKGEILSEENLTVKRTGKKGISPMRW---GEIIGLKAPRDFKKGEII 332
Query: 83 P 83
Sbjct: 333 M 333
>gi|332999318|gb|EGK18904.1| hypothetical protein SFK272_4049 [Shigella flexneri K-272]
gi|333014687|gb|EGK34033.1| hypothetical protein SFK227_3898 [Shigella flexneri K-227]
Length = 310
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 12/107 (11%), Positives = 35/107 (32%), Gaps = 2/107 (1%)
Query: 39 EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK 98
E ++++ V + + + + T D + ++ I+RG+
Sbjct: 122 EEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGST 181
Query: 99 VRIILTQGNMTISTAGI--ALSDASIGDVIAVKNIDTGVMVSGSVVD 143
++ Q + + L G + + + ++ G+V
Sbjct: 182 AVALVKQNSFYVLAYMEETKLEGGRPGYRAEITPLGSNKVLKGTVDS 228
>gi|317494217|ref|ZP_07952633.1| HlyD family secretion protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917990|gb|EFV39333.1| HlyD family secretion protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 311
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 2/107 (1%)
Query: 39 EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK 98
E +++S V + + + T D + +H+ I+RGA
Sbjct: 122 EEIDQSSNVLATVRQQLAKAQSTRDLAKLDLERTVVRAPADGWVTNLNVHQGEFINRGAT 181
Query: 99 VRIILTQGNMTISTAGI--ALSDASIGDVIAVKNIDTGVMVSGSVVD 143
++ +G I L GD + + + + ++ G+V
Sbjct: 182 AVALVKKGTFYILAYMEETKLDGIKRGDRVEITPLGSNRILYGTVDS 228
>gi|302801502|ref|XP_002982507.1| hypothetical protein SELMODRAFT_445219 [Selaginella moellendorffii]
gi|300149606|gb|EFJ16260.1| hypothetical protein SELMODRAFT_445219 [Selaginella moellendorffii]
Length = 469
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIR---GNYAHSIKDVVGLVTRRV 75
S+ S+ + + + + L + L++ + + G + V + V
Sbjct: 363 SVMESITAGVPMITRPLMGDQTLTAAMLRQASMPAIALPTSKGGAVTKTEIVAAIEELMV 422
Query: 76 LLPDHVIPLSVLHRPYVISRGAK 98
+ ++ G +
Sbjct: 423 RERGAELRRRAGDAAALVRSGME 445
>gi|148256956|ref|YP_001241541.1| putative pilus assembly protein CpaB [Bradyrhizobium sp. BTAi1]
gi|146409129|gb|ABQ37635.1| Putative pilus assembly protein cpaB [Bradyrhizobium sp. BTAi1]
Length = 266
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 36/123 (29%), Gaps = 14/123 (11%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNI-----RGNYAHSIKDVVGL 70
++ + +V I G+ + L + RG+ + +VG
Sbjct: 33 AVAPVAQLPTVEVLVAKNDIGLGQAIKPGDLVWQTWPEAASNIFIRRGDRPEAANQLVGT 92
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG-----DV 125
+ R + I L + G+ + M + I+ + G D
Sbjct: 93 IARAPFVIGEPIREQKLVKSD----GSGFMAAILPAGMRAISTEISPETGAGGFILPNDR 148
Query: 126 IAV 128
+ V
Sbjct: 149 VDV 151
>gi|134298813|ref|YP_001112309.1| SAF domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134051513|gb|ABO49484.1| SAF domain protein [Desulfotomaculum reducens MI-1]
Length = 215
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 3/100 (3%)
Query: 1 MDCVRFLLFFSLYVLSLDSLFASVIGHAVVPSVV--INAGEVLNESRLKEMQVTNSNIRG 58
+ + L+F + S ++ +A+ V +V I AG+ + + +K +V +
Sbjct: 9 ISLILSLVFTGAVIFSSNTKYAAATKTVEVAAVNQYIPAGKKITKDDIKMDRVP-EKMAI 67
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK 98
N DVVG L+ D I + + G
Sbjct: 68 NLVQKADDVVGKTILVSLVKDQYIWKKAIAQGEAKKEGYI 107
>gi|83859356|ref|ZP_00952877.1| Flp pilus assembly CpaB [Oceanicaulis alexandrii HTCC2633]
gi|83852803|gb|EAP90656.1| Flp pilus assembly CpaB [Oceanicaulis alexandrii HTCC2633]
Length = 268
Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 8/124 (6%), Positives = 29/124 (23%), Gaps = 7/124 (5%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV-VGLVTRRVLL 77
A + +V + ++ ++ + + + + +
Sbjct: 40 QAAAPEVVQVLVAARDMSPSSRVSGADFRWTNWPVEAVIPAFITREARPDAMDELSGAVT 99
Query: 78 PDHVIPLSVLHRPYVISRGAK-VRIILTQGNMTISTAGIALSDASIG-----DVIAVKNI 131
+ + ++ G + M I+ + G D + V
Sbjct: 100 RAAFVDGEPILPGKLVQPGEAGFMAAVIDPGMRAVAVPISAESGAGGFILPNDRVDVLVT 159
Query: 132 DTGV 135
+
Sbjct: 160 TSAR 163
>gi|260814354|ref|XP_002601880.1| hypothetical protein BRAFLDRAFT_86357 [Branchiostoma floridae]
gi|229287183|gb|EEN57892.1| hypothetical protein BRAFLDRAFT_86357 [Branchiostoma floridae]
Length = 264
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 9/91 (9%)
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS 121
+++ + S + + R + + + +G +
Sbjct: 44 SGLQEWREWRSEVANSATQSSKQSHMATGVHVMRN---NLSSQGPGIRVRESG----SGN 96
Query: 122 IGDVIAVKNIDTGVMVSG-SVVDTGT-VRVV 150
G I V+ +G G V ++G+ VRV
Sbjct: 97 QGPGIRVRESGSGNQGPGFRVRESGSGVRVR 127
>gi|171705318|gb|ABH06368.2| MassB [Pseudomonas fluorescens]
Length = 4307
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 4/103 (3%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAG-EVLNESRLKEMQVTNSNIRGNYA 61
+ FS L+ + VVP+ I AG + S L +Q+T I
Sbjct: 2158 SADVRVLFSQPSLAALAAAVGSGREIVVPANGIPAGCTQITPSMLSLVQLTPQAIARIV- 2216
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILT 104
G + + P + +L+ +G +
Sbjct: 2217 --ANVPGGAANIQDIYPLAPLQEGILYHHISAEQGDPYLLQSR 2257
>gi|114799072|ref|YP_761692.1| pilus assembly protein CpaB [Hyphomonas neptunium ATCC 15444]
gi|114739246|gb|ABI77371.1| pilus assembly protein CpaB [Hyphomonas neptunium ATCC 15444]
Length = 281
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 47/147 (31%), Gaps = 30/147 (20%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSI------KDVVGLVTRRVLLPDHV 81
+ S + GE + L+ + +++ G V + +
Sbjct: 53 VLTASRDLTIGEQIKAEDLQWSIWPELGVAEGQYTETAAPGAVEELTGAVVKMPIYKLEP 112
Query: 82 IPLSVLHRPYVISRGAKVRI-ILTQGNMTISTAGIALSDASIG-----DVIAVK------ 129
I V+ RG + +L +M + GI+ AS G D + +
Sbjct: 113 I-----MPQRVVKRGEAGLLPVLMGEDMRAVSIGISPESASGGFILPNDRVDLILTYEQT 167
Query: 130 -----NIDTGVMVSGSVVDTGTVRVVV 151
+ + VS +V+ VRV+
Sbjct: 168 PSATNGLTSARTVSMTVLQN--VRVLA 192
>gi|293189446|ref|ZP_06608166.1| SAF domain protein [Actinomyces odontolyticus F0309]
gi|292821536|gb|EFF80475.1| SAF domain protein [Actinomyces odontolyticus F0309]
Length = 194
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
L+ SL S S + I GE L ++E+ ++ + Y + +
Sbjct: 11 LIIASLIAFSALSGLLRGGSRVYTATTTIAPGETLTADNVREVVLSVDS--DVYVPTSEA 68
Query: 67 VVGLVTRRVLLPDHVIPLSVLHR 89
+G V R + P ++ + L +
Sbjct: 69 PMGSVVTRQITPGQIVMRTDLSQ 91
>gi|13475418|ref|NP_106982.1| pilus assembly protein [Mesorhizobium loti MAFF303099]
gi|14026170|dbj|BAB52768.1| pilus assembly protein [Mesorhizobium loti MAFF303099]
Length = 354
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV +V + G+ L+ +L+E+ + + ++++ P +
Sbjct: 44 TVVVAAVALKFGDTLSADKLREVAWPAGAVPAGAFKTTEELLTKDVLPGAAPKQALQAIG 103
Query: 87 LHRPYVISR----GAKVRIILTQG 106
++ P + ++ G + + G
Sbjct: 104 VNEPVLATKITGPGQRATLSAVLG 127
>gi|89899602|ref|YP_522073.1| Flp pilus assembly CpaB [Rhodoferax ferrireducens T118]
gi|89344339|gb|ABD68542.1| Flp pilus assembly CpaB [Rhodoferax ferrireducens T118]
Length = 286
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 6/57 (10%), Positives = 15/57 (26%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
G V + I G ++ ++ + + G V + +
Sbjct: 35 GRIAVANTDIELGGRISPEMIRMADWPLGSTPTGAYKEAAKLEGRVVLVSMQRGEPL 91
>gi|74313772|ref|YP_312191.1| p-hydroxybenzoic acid efflux subunit AaeA [Shigella sonnei Ss046]
gi|123616034|sp|Q3YX06|AAEA_SHISS RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
Short=pHBA efflux pump protein A
gi|73857249|gb|AAZ89956.1| putative membrane protein [Shigella sonnei Ss046]
Length = 310
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 12/107 (11%), Positives = 35/107 (32%), Gaps = 2/107 (1%)
Query: 39 EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK 98
E ++++ V + + + + T D + ++ I+RG+
Sbjct: 122 EEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGST 181
Query: 99 VRIILTQGNMTISTAGI--ALSDASIGDVIAVKNIDTGVMVSGSVVD 143
++ Q + + L G + + + ++ G+V
Sbjct: 182 AVALVKQNSFYVLAYMEETKLEGGRPGYRAEITPLGSNKVLKGTVDS 228
>gi|308178037|ref|YP_003917443.1| hypothetical protein AARI_22500 [Arthrobacter arilaitensis Re117]
gi|307745500|emb|CBT76472.1| hypothetical protein AARI_22500 [Arthrobacter arilaitensis Re117]
Length = 236
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 21/66 (31%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV I AG + ++L V S++ V G L V+
Sbjct: 63 EVVVVISDIPAGSQITSNQLAVQTVRLDPQDDEVFESLEPVSGQRAAVALPAGTVLRSYS 122
Query: 87 LHRPYV 92
L P +
Sbjct: 123 LVGPQL 128
>gi|320181511|gb|EFW56429.1| Fusaric acid resistance protein fusE [Shigella boydii ATCC 9905]
Length = 310
Score = 34.9 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 12/107 (11%), Positives = 35/107 (32%), Gaps = 2/107 (1%)
Query: 39 EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK 98
E ++++ V + + + + T D + ++ I+RG+
Sbjct: 122 EEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGST 181
Query: 99 VRIILTQGNMTISTAGI--ALSDASIGDVIAVKNIDTGVMVSGSVVD 143
++ Q + + L G + + + ++ G+V
Sbjct: 182 AVALVKQNSFYVLAYMEETKLEGGRPGYRAEITPLGSNKVLKGTVDS 228
>gi|28572304|ref|NP_789084.1| membrane/secreted protein [Tropheryma whipplei TW08/27]
gi|28410435|emb|CAD66821.1| putative membrane/secreted protein [Tropheryma whipplei TW08/27]
Length = 248
Score = 34.5 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 16/129 (12%)
Query: 5 RFLLFFSLYVLSLDSLFASVIGH-----AVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
R L+ +L S +F + + V + ++ G+ + + ++
Sbjct: 12 RILIGLALIAASFIGVFFVIKTNNSKSQVYVATRPLSIGDKFDAKQFSIVEANLGANLDK 71
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD 119
Y + V R ++P +P S L + V ++ + AG D
Sbjct: 72 YIT-PGSLPNAVFNRPIMPGEFLPKSALVP---VIDKDIVAVV-------LRIAGDLPGD 120
Query: 120 ASIGDVIAV 128
GD++ V
Sbjct: 121 VKEGDLVDV 129
>gi|323137424|ref|ZP_08072502.1| Flp pilus assembly protein CpaB [Methylocystis sp. ATCC 49242]
gi|322397411|gb|EFX99934.1| Flp pilus assembly protein CpaB [Methylocystis sp. ATCC 49242]
Length = 267
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 3/69 (4%), Positives = 18/69 (26%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
+ + +V + + G + + + ++ +++ +
Sbjct: 32 APVVVAPPPMNTEQVLVATRDLTYGTEIVDQDMAWVEWPKTSVPVGSLTKTESPNAQEEV 91
Query: 74 RVLLPDHVI 82
+ I
Sbjct: 92 KSSYVRIPI 100
>gi|307327609|ref|ZP_07606794.1| SAF domain protein [Streptomyces violaceusniger Tu 4113]
gi|306886721|gb|EFN17722.1| SAF domain protein [Streptomyces violaceusniger Tu 4113]
Length = 228
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 58/162 (35%), Gaps = 14/162 (8%)
Query: 3 CVRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNS-NIRGNYA 61
CV + L + + + + + + AG+ L + L +V++ + A
Sbjct: 40 CVVLAVLCGLGAAAAVTSASDR-KQVLAVARDVPAGQALTAADLSVAEVSSDAALTPVPA 98
Query: 62 HSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQ-----GNMTISTAGI 115
V+G L ++ S L + +V + + + G + +
Sbjct: 99 ADKAGVIGKRPAVDLRKGGLLTTSQLAGGTGLGDDQQQVGVQIKRGQAPAGTLAPGDKVL 158
Query: 116 ALSDASIGDVIAVKNIDTGVMVSGSVV------DTGTVRVVV 151
A+S + GD A K+ + +VV +GTV V +
Sbjct: 159 AVSTPAQGDEQAAKDDGPPSTIEAAVVSVSRPDASGTVVVNL 200
>gi|119715033|ref|YP_921998.1| SAF domain-containing protein [Nocardioides sp. JS614]
gi|119535694|gb|ABL80311.1| SAF domain [Nocardioides sp. JS614]
Length = 211
Score = 34.5 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 17/53 (32%)
Query: 31 PSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
+ + AG VL L+ + ++ + D VG L +
Sbjct: 53 AARDLTAGTVLAPGDLRAVGFAPDSVPAGASDDAIDAVGRTLAAPLRAGEPVT 105
>gi|256396011|ref|YP_003117575.1| SAF domain-containing protein [Catenulispora acidiphila DSM 44928]
gi|256362237|gb|ACU75734.1| SAF domain protein [Catenulispora acidiphila DSM 44928]
Length = 222
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 1/82 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK-DVVGLVTRRVLLPDHVIPLS 85
+V + G+V++ LK + + + + VVG L+PD V+
Sbjct: 64 PVLVVGAPVQVGQVISADDLKVVDIAPGTLAHVAFADEEKQVVGQPAAVPLVPDEVLTWQ 123
Query: 86 VLHRPYVISRGAKVRIILTQGN 107
++ G V +
Sbjct: 124 LIGAASYPPAGYGVATTQMKAG 145
>gi|329900777|ref|ZP_08272581.1| SAF domain protein [Oxalobacteraceae bacterium IMCC9480]
gi|327549366|gb|EGF33934.1| SAF domain protein [Oxalobacteraceae bacterium IMCC9480]
Length = 323
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 7/37 (18%), Positives = 11/37 (29%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA 61
VV +N G VL+ + Q+
Sbjct: 51 TIPVVVAKGDLNKGTVLSADNVAVRQIPREFAHSASV 87
>gi|27378603|ref|NP_770132.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27351751|dbj|BAC48757.1| blr3492 [Bradyrhizobium japonicum USDA 110]
Length = 329
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 25/166 (15%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAV-------VPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
L+ +++ + + + G A V + ++ G + + +
Sbjct: 34 LIAYNMNLPKQVPVAVTEQGPAPPSTVGYFVAARPLSRGTLARDEDFAVRSALPERLPAG 93
Query: 60 YAHSIKD----VVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIIL-TQGNMTISTAG 114
D + G + R+ + I L + RP RG ++ ++I
Sbjct: 94 AILETPDAKAGLTGSLVRKFVEAGSPITLQDVLRP--RDRGFLASVLAPDSRAISIKVDE 151
Query: 115 IALSDA--SIGDVIAV-------KNIDTGVMVSGSVVDTGTVRVVV 151
+ GD + V K +S V+ VRV+
Sbjct: 152 ESGVSGLIRPGDHVDVLLTQVFEKADPARRALSEVVLGN--VRVIA 195
>gi|158317577|ref|YP_001510085.1| SAF domain-containing protein [Frankia sp. EAN1pec]
gi|158112982|gb|ABW15179.1| SAF domain protein [Frankia sp. EAN1pec]
Length = 258
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 36/118 (30%), Gaps = 13/118 (11%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA---HSIKDVVGL 70
+ A VV + + AG ++ +S L + +++G
Sbjct: 49 AGARLFATADRTRQWVVAAADLPAGHIVVDSDLTTATAHLDGAMSDRYYPGDRRSELLGA 108
Query: 71 VTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
R + ++ + + V +I+ G + D S GD + V
Sbjct: 109 TLARPVSSGELLSGADFAGEGAAATR-LVPVIVKAGRV---------PDLSPGDHVDV 156
>gi|297563018|ref|YP_003681992.1| SAF domain protein [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296847466|gb|ADH69486.1| SAF domain protein [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 218
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 24/70 (34%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V S + A + L E L + ++ G + GL + VI +
Sbjct: 51 RVLVASRDLGAADPLTEGDLTARDLPAGSVPGGALAADTAAAGLRLNAPVRRGEVITDAR 110
Query: 87 LHRPYVISRG 96
L P + G
Sbjct: 111 LADPPARAYG 120
>gi|326333348|ref|ZP_08199595.1| putative Flp pilus assembly protein CpaB [Nocardioidaceae bacterium
Broad-1]
gi|325948992|gb|EGD41085.1| putative Flp pilus assembly protein CpaB [Nocardioidaceae bacterium
Broad-1]
Length = 219
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 5/84 (5%)
Query: 2 DCVRFLLFFSLYVLSLDSLFAS--VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGN 59
+ FLL S + + V S + G VL + L +++ ++ +
Sbjct: 21 RLLAFLLTASAVAIGFSATRPDPPDTSTMAVASRDLPVGTVLTAADLTDIETDPGSVPAD 80
Query: 60 YAHSIKDVVGLVTRRVLLPDHVIP 83
+ +G L +
Sbjct: 81 L---AEAPLGERLAAPLRQGEPVT 101
>gi|307293449|ref|ZP_07573295.1| Flp pilus assembly protein CpaB [Sphingobium chlorophenolicum L-1]
gi|306881515|gb|EFN12731.1| Flp pilus assembly protein CpaB [Sphingobium chlorophenolicum L-1]
Length = 338
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 13/115 (11%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA----HSIKDVVGLVTRRVLLPDHVIP 83
+V + + G +L+ + + Y + +VG V R + +
Sbjct: 49 VLVATKALPVGTILDAESFRFQPWPKELVEQAYYLKGQSDPQKLVGSVIRTAISAGQPMT 108
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSD---ASI--GDVIAVKNIDT 133
L + +P RG M T ++ + + GD + + +
Sbjct: 109 LGSVIKP--GERG--FLAAALGPGMRAVTVPVSAQNSVAGFVFPGDRVDLMLTQS 159
>gi|300021853|ref|YP_003754464.1| Flp pilus assembly protein CpaB [Hyphomicrobium denitrificans ATCC
51888]
gi|299523674|gb|ADJ22143.1| Flp pilus assembly protein CpaB [Hyphomicrobium denitrificans ATCC
51888]
Length = 267
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG--LVTRRVLLPDHVIPL 84
+V + I+ G+++NE S + +Y G + ++
Sbjct: 43 EVLVAATDISVGQIVNEGNFHWATWPKSAVTADYVTKANSGPGKAHEFTGAVARSAILSG 102
Query: 85 SVLHRPYVISRGA-KVRIILTQGNMT-ISTAGIA 116
+ +I G V + M IST A
Sbjct: 103 EPVTTQKLIKAGQGGVLAAILPQGMRAISTKIKA 136
>gi|218886923|ref|YP_002436244.1| N-acylneuraminate-9-phosphate synthase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757877|gb|ACL08776.1| N-acylneuraminate-9-phosphate synthase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 394
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 4/85 (4%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
V ++ A + ++V + + AG VL L + VVG
Sbjct: 290 VTPHEAAMAVKLRKSLVAARDLAAGTVLAPDDLTVKS-PGDGLSPELW---DAVVGNALT 345
Query: 74 RVLLPDHVIPLSVLHRPYVISRGAK 98
L D + ++L P
Sbjct: 346 VALPRDGQLLPAMLAMPVHTGEADI 370
>gi|227114875|ref|ZP_03828531.1| hypothetical protein PcarbP_18020 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 314
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 7/109 (6%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
+V + ++ G+ ++ S L+ R +D L+ L S
Sbjct: 45 AAVLVAAKDLHPGDFIDPSSLRWQTTDEPVSRSFNFVRGQDNQSLLLGATLRETVT-QGS 103
Query: 86 VLHRPYVISRGAK--VRIILTQG--NMTISTAGIALSDA--SIGDVIAV 128
L V+ V +L +G +++ T+ IA + S GD + V
Sbjct: 104 WLSSNVVVKPNEPGFVAAVLHKGMRAISVPTSAIASNAGLVSAGDRVDV 152
>gi|170740622|ref|YP_001769277.1| Flp pilus assembly protein CpaB [Methylobacterium sp. 4-46]
gi|168194896|gb|ACA16843.1| Flp pilus assembly protein CpaB [Methylobacterium sp. 4-46]
Length = 268
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 6/71 (8%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS------IKDVVGLVTRRVLLP 78
+V + + G+ L + L+ ++ + ++D VG R L
Sbjct: 45 TVDVLVAAADLPMGQTLKPADLRWQAWPKGSVNDGFIQRGQNPRALEDTVGSFVRGPFLG 104
Query: 79 DHVIPLSVLHR 89
I L R
Sbjct: 105 GEPIRREKLIR 115
>gi|209548020|ref|YP_002279937.1| N-acylneuraminate-9-phosphate synthase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533776|gb|ACI53711.1| N-acylneuraminate-9-phosphate synthase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 338
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 5/22 (22%), Positives = 12/22 (54%)
Query: 29 VVPSVVINAGEVLNESRLKEMQ 50
VV + + AG+V++ + +
Sbjct: 283 VVLNRPLKAGDVISAGDISVKR 304
>gi|291529651|emb|CBK95237.1| SAF domain [Eubacterium rectale M104/1]
Length = 273
Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 8/105 (7%)
Query: 28 AVVPSVVINAGEVLNESR----LKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
V+ S I G ++ + K+ V + + + IK + G V + V
Sbjct: 54 VVIASADIPQGTIITKDNAENYFKKENVNSDLVTKSTVTDIKSIEGKFLTNVAAGEIVTS 113
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
V + G+ S G GD++ +
Sbjct: 114 DRYYETKDTRDLKNPVSLTFAAGSAENSVNGTIRG----GDIVDI 154
>gi|312898066|ref|ZP_07757469.1| DNA-directed RNA polymerase, beta' subunit [Megasphaera
micronuciformis F0359]
gi|310620836|gb|EFQ04393.1| DNA-directed RNA polymerase, beta' subunit [Megasphaera
micronuciformis F0359]
Length = 1410
Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 15/126 (11%)
Query: 38 GEVLNESRLKEM---QVTNSNIRG---NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPY 91
VL L + ++ ++RG + + + + P+ I ++
Sbjct: 910 DHVLTNDDLDTVIEYKIPKLSLRGSQMDINDDLNHTNKIENVMLGAPEDSIRDALREAMV 969
Query: 92 VISRGAKV-RIILTQGNMTISTAGIALSDASIG-------DVIAVKNID-TGVMVSGSVV 142
G V R + I AG AL++ +I + + V+N D GV V+ V
Sbjct: 970 ENMLGKTVERTVYDSMGTEICPAGTALTEEAIERILLSDVEEVKVRNNDIRGVEVTAIVE 1029
Query: 143 DTGTVR 148
G +
Sbjct: 1030 GDGIIE 1035
>gi|228982437|ref|ZP_04142696.1| hypothetical protein bthur0002_55700 [Bacillus thuringiensis Bt407]
gi|228776620|gb|EEM24928.1| hypothetical protein bthur0002_55700 [Bacillus thuringiensis Bt407]
Length = 267
Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 21/68 (30%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ I A + E L + + + +A S KD+VG L+
Sbjct: 35 TVWQFNRDIPANTQITEGDLVKTTIPAQAVTKGFALSPKDIVGKYNNSKLVTGEYALKQK 94
Query: 87 LHRPYVIS 94
L I
Sbjct: 95 LVDKKNID 102
>gi|308235642|ref|ZP_07666379.1| hypothetical protein GvagA14_05378 [Gardnerella vaginalis ATCC
14018]
gi|311115187|ref|YP_003986408.1| hypothetical protein HMPREF0421_21303 [Gardnerella vaginalis ATCC
14019]
gi|310946681|gb|ADP39385.1| hypothetical protein HMPREF0421_21303 [Gardnerella vaginalis ATCC
14019]
Length = 223
Score = 34.2 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 40/124 (32%), Gaps = 11/124 (8%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK 65
F + + + V I+ G ++ + L + V +++ + +
Sbjct: 41 FFISVATLIAINMITSCQETQIIPVAIRDISKGTLIKQDDLSYVNVPKNSVFNHVINKDL 100
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTISTAGIALSDASIGD 124
++ + I S + + I G + I L N D +IG+
Sbjct: 101 IKNAIIATCNIKYGMPIFTSQITQQAKIPPGFTTISIKLASNN----------QDLNIGE 150
Query: 125 VIAV 128
I++
Sbjct: 151 NISI 154
>gi|167582064|ref|ZP_02374938.1| Flp pilus assembly protein CpaB family [Burkholderia thailandensis
TXDOH]
Length = 192
Score = 34.2 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + + AG+ + LK Q + V G + ++ +
Sbjct: 46 LVPVVVATRALPAGQPIPADALKVQQTPAPIA--GAFPNPTLVTGRIPANDIVAQAPVLE 103
Query: 85 S 85
S
Sbjct: 104 S 104
>gi|84687278|ref|ZP_01015158.1| CpaB family protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664711|gb|EAQ11195.1| CpaB family protein [Rhodobacterales bacterium HTCC2654]
Length = 274
Score = 34.2 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 9/111 (8%), Positives = 28/111 (25%), Gaps = 7/111 (6%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
V + G+ + + ++ + I + +++ +R +
Sbjct: 37 TAEIYVVKESVAYGDRITDENIRLTRFPVDAIPEGAFKTEEELFPQGEKRYRTVLRAMEK 96
Query: 85 SVLHRPYVISR-----GAKVRIILTQGNMTISTAGIALSDA--SIGDVIAV 128
++ G R+ I + GD + +
Sbjct: 97 DEALLAVKVTEAGADAGVAARLASGMRAFAIRVDVASGVSGFLRPGDKVDI 147
>gi|167824387|ref|ZP_02455858.1| Flp pilus assembly protein CpaB family [Burkholderia pseudomallei
9]
Length = 201
Score = 34.2 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + + AG+ + LK Q + V G + + +
Sbjct: 46 MVPVVVAARALPAGQPIPADALKVQQTPTPIA--GAFPNPMLVTGRIPASDIGAQAPVLE 103
Query: 85 S 85
S
Sbjct: 104 S 104
>gi|256372054|ref|YP_003109878.1| SAF domain protein [Acidimicrobium ferrooxidans DSM 10331]
gi|256008638|gb|ACU54205.1| SAF domain protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 237
Score = 34.2 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
VV + I AG + + L +T ++ D VG + P ++ S++
Sbjct: 62 VVVTRPIPAGATIERADLGLASITVPQAVRATLLAVDDAVGRTAAVTIAPGTLLERSMV 120
>gi|167816011|ref|ZP_02447691.1| Flp pilus assembly protein CpaB family [Burkholderia pseudomallei
91]
Length = 183
Score = 34.2 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + + AG+ + LK Q + V G + + +
Sbjct: 46 MVPVVVAARALPAGQPIPADALKVQQTPTPIA--GAFPNPMLVTGRIPASDIGAQAPVLE 103
Query: 85 S 85
S
Sbjct: 104 S 104
>gi|288921587|ref|ZP_06415859.1| SAF domain protein [Frankia sp. EUN1f]
gi|288347005|gb|EFC81310.1| SAF domain protein [Frankia sp. EUN1f]
Length = 230
Score = 34.2 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 14/107 (13%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH---SIKDVVGLVTRRVLLPDHVIP 83
AVV + + GE++ + L +V+ + + + +VG L ++
Sbjct: 58 DAVVLTRPVRRGELIETTDLAVARVSAAGTAVRLVSPQVARRALVGRQALLDLPAGTLVT 117
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
+ + A+V + A AL + GD + V
Sbjct: 118 PEMAGSALPPAGSARVGL---------RLAPEALPSPQVQPGDWVQV 155
>gi|229588196|ref|YP_002870315.1| hypothetical protein PFLU0648 [Pseudomonas fluorescens SBW25]
gi|229360062|emb|CAY46916.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 313
Score = 34.2 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 26 GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
VV + A L + L + + + +G + R L +
Sbjct: 57 QPVVVLVHDVPAYRALTAADLVVER--LRTVPVGSLTQLDQAIGRMPLRALGAGTWLTED 114
Query: 86 VLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV----KNIDTGVMVSG 139
++R I + + ++ + + + GD + V + + S
Sbjct: 115 SFTGGGPLAR----MIRPDERALAVAVDEVIGAAGQLTPGDYVDVLLFLRQDASNAEQSA 170
Query: 140 SVV 142
+V
Sbjct: 171 QIV 173
>gi|256374774|ref|YP_003098434.1| SAF domain protein [Actinosynnema mirum DSM 43827]
gi|255919077|gb|ACU34588.1| SAF domain protein [Actinosynnema mirum DSM 43827]
Length = 191
Score = 34.2 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 5/61 (8%), Positives = 15/61 (24%), Gaps = 1/61 (1%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+V + + G L ++ +++ + VG +
Sbjct: 25 PATTTVLVAARDLPPGVALAREDVRAVELPPGVAPEGVVA-AEVAVGRALVSTARAGEPL 83
Query: 83 P 83
Sbjct: 84 T 84
>gi|154509492|ref|ZP_02045134.1| hypothetical protein ACTODO_02024 [Actinomyces odontolyticus ATCC
17982]
gi|153799126|gb|EDN81546.1| hypothetical protein ACTODO_02024 [Actinomyces odontolyticus ATCC
17982]
Length = 194
Score = 34.2 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
L+ S+ S S + I GE L ++E+ ++ + Y + +
Sbjct: 11 LIIASVIAFSALSGLLRGGSRVYTATTTIAPGETLTADNVREVVLSVDS--DVYVPTSEA 68
Query: 67 VVGLVTRRVLLPDHVIPLSVLHR 89
+G V R + P ++ + L +
Sbjct: 69 PMGSVATRQITPGQIVMRTDLSQ 91
>gi|83589608|ref|YP_429617.1| N-acetylneuraminate synthase [Moorella thermoacetica ATCC 39073]
gi|83572522|gb|ABC19074.1| N-acetylneuraminate synthase [Moorella thermoacetica ATCC 39073]
Length = 337
Score = 34.2 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
+V + I AGE++ +S L + + I N VVG RR + ++ ++
Sbjct: 283 LVAARDIAAGEIITDSCLTAKR-PGTGIPPNLW---DVVVGRQARRDIAAGSILSWDMI 337
>gi|170701751|ref|ZP_02892687.1| Flp pilus assembly protein CpaB [Burkholderia ambifaria IOP40-10]
gi|170133334|gb|EDT01726.1| Flp pilus assembly protein CpaB [Burkholderia ambifaria IOP40-10]
Length = 301
Score = 34.2 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
A+ VV + ++ AG+ + LK QV S + + +VG V
Sbjct: 37 VATPTVAAQSVPIVVAARLLPAGQPIPADALKLAQV--SMMPTGGFNDPTALVGRVPAND 94
Query: 76 LLPDHVIP 83
+L +
Sbjct: 95 ILAAAPVL 102
>gi|167894494|ref|ZP_02481896.1| Flp pilus assembly protein CpaB family [Burkholderia pseudomallei
7894]
Length = 204
Score = 34.2 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + + AG+ + LK Q + V G + + +
Sbjct: 46 MVPVVVAARALPAGQPIPADALKVQQTPTPIA--GAFPNPMLVTGRIPASDIGAQAPVLE 103
Query: 85 S 85
S
Sbjct: 104 S 104
>gi|76810330|ref|YP_333339.1| CpaB family Flp pilus assembly protein [Burkholderia pseudomallei
1710b]
gi|76579783|gb|ABA49258.1| Flp pilus assembly protein CpaB family [Burkholderia pseudomallei
1710b]
Length = 348
Score = 34.2 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + + AG+ + LK Q + V G + + +
Sbjct: 95 MVPVVVAARALPAGQPIPADALKVQQTPTPIA--GAFPNPMLVTGRIPASDIGAQAPVLE 152
Query: 85 S 85
S
Sbjct: 153 S 153
>gi|260459390|ref|ZP_05807645.1| peptidase C14 caspase catalytic subunit p20 [Mesorhizobium
opportunistum WSM2075]
gi|259034944|gb|EEW36200.1| peptidase C14 caspase catalytic subunit p20 [Mesorhizobium
opportunistum WSM2075]
Length = 558
Score = 34.2 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNY--AHSIKDVVGLVTRRVLLPDHVIPLSV 86
++ + ++AGEVL ES V + + + + V+G + + P
Sbjct: 15 IILAWTLSAGEVLAESDASRSAVPINRVPTSAHGERRLALVIGNSAYQFVQPLKNPNADA 74
Query: 87 -LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
L + G V ++L + + + IA A D + V
Sbjct: 75 TLIAKSLEQVGFSVELVLDANQLQMKRSLIAFGKALRRDNVDV 117
>gi|317125617|ref|YP_004099729.1| SAF domain protein [Intrasporangium calvum DSM 43043]
gi|315589705|gb|ADU49002.1| SAF domain protein [Intrasporangium calvum DSM 43043]
Length = 238
Score = 34.2 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 39/123 (31%), Gaps = 11/123 (8%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-SIK 65
L+ S + + A V + AG+ + + + + V S+ G Y
Sbjct: 42 LVLVSATLGARLVASADERTPYFVAVDDLVAGDRVTGATFRRVDVALSDGMGGYLRADFP 101
Query: 66 DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDV 125
VG R L ++P S L P + +T+ T A G
Sbjct: 102 VPVGKALTRDLRAGELVPSSALSDPGEVD----------VQRVTVRTDATATVGLDRGQR 151
Query: 126 IAV 128
+ V
Sbjct: 152 VDV 154
>gi|146297616|ref|YP_001181387.1| SAF domain-containing protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|145411192|gb|ABP68196.1| SAF domain protein [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 219
Score = 34.2 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+ +V S+ I GE + + +L ++V + A + +V+ + I +
Sbjct: 41 NIIVASMDIKKGEKITQDKLALVRV-AAPTPIPAAKNPVEVLNKYVLYDIKRGEPIIPAK 99
Query: 87 LHRPY--VISRGAKVRII 102
L +S+G +I
Sbjct: 100 LTVKPPIDVSKGQYSMLI 117
>gi|168180869|ref|ZP_02615533.1| spore coat polysaccharide biosynthesis protein SpsE [Clostridium
botulinum NCTC 2916]
gi|182668308|gb|EDT80287.1| spore coat polysaccharide biosynthesis protein SpsE [Clostridium
botulinum NCTC 2916]
Length = 343
Score = 34.2 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+IG ++V + + AGEVL + + + + ++G ++ + D ++
Sbjct: 273 EIIGRSIVAARDLEAGEVLRKEDIDYKRPGWGIRP----YDENKIIGAHLQKSIKKDDIL 328
Query: 83 PLSVLHRP 90
L R
Sbjct: 329 QLDYFMRK 336
>gi|163857692|ref|YP_001631990.1| putative Flp pilus assembly protein [Bordetella petrii DSM 12804]
gi|163261420|emb|CAP43722.1| putative Flp pilus assembly protein [Bordetella petrii]
Length = 320
Score = 34.2 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
V+ + I AG L+ LK Q G +D+ G V R + I
Sbjct: 54 TYPVVLAAKDIQAGTRLDAGMLKVQQWPIPLAHG--YAKPEDLAGQVARLDIAGGEPIT 110
>gi|153941362|ref|YP_001392003.1| NeuB family protein [Clostridium botulinum F str. Langeland]
gi|152937258|gb|ABS42756.1| NeuB family protein [Clostridium botulinum F str. Langeland]
gi|295320018|gb|ADG00396.1| NeuB family protein [Clostridium botulinum F str. 230613]
Length = 343
Score = 34.2 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+IG ++V + + AGEVL + + + + ++G ++ + D ++
Sbjct: 273 EIIGRSIVAARDLEAGEVLRKEDIDYKRPGWGIRP----YDENKIIGAHLQKSIKKDDIL 328
Query: 83 PLSVLHRP 90
L R
Sbjct: 329 QLDYFMRK 336
>gi|209546484|ref|YP_002278402.1| Flp pilus assembly protein CpaB [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537728|gb|ACI57662.1| Flp pilus assembly protein CpaB [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 305
Score = 34.2 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 41/125 (32%), Gaps = 15/125 (12%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V + + G+ + L+ + ++ SI+ VVG +
Sbjct: 46 TLIVAAKPMRFGDRIRPENLRAIPWPSNETPAGSFVSIETVVGSDAQP------------ 93
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ I G V G +T AL I V N G V+G V +
Sbjct: 94 RYAMAAIDPGEPVLSSKITGAGERATLSAALDQGMKAVSIRV-NDVLG--VAGFVRPSDR 150
Query: 147 VRVVV 151
V V++
Sbjct: 151 VDVLL 155
>gi|293606492|ref|ZP_06688850.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815115|gb|EFF74238.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 198
Score = 34.2 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV I AG ++ + + + + N ++ + G V R + I S+
Sbjct: 56 PVVVAKQAIPAGTRIDAQNMLTVAQWQAAL-SNSFNTPDPLEGAVARVDIAAGDPIVPSL 114
Query: 87 LHR 89
L +
Sbjct: 115 LAQ 117
>gi|208701981|ref|YP_002267168.1| SAF domain protein, putative [Bacillus cereus H3081.97]
gi|228943661|ref|ZP_04106082.1| hypothetical protein bthur0008_62160 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228956198|ref|ZP_04118081.1| hypothetical protein bthur0006_54880 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|332287970|ref|YP_004169156.1| hypothetical protein pBMB0558_00225 [Bacillus thuringiensis CT43]
gi|208658273|gb|ACI30639.1| SAF domain protein, putative [Bacillus cereus H3081.97]
gi|228803515|gb|EEM50251.1| hypothetical protein bthur0006_54880 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228816013|gb|EEM62217.1| hypothetical protein bthur0008_62160 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|315273042|gb|ADU03111.1| hypothetical protein pBMB0558_00225 [Bacillus thuringiensis serovar
chinensis CT-43]
gi|326943372|gb|AEA19267.1| SAF domain protein [Bacillus thuringiensis serovar chinensis CT-43]
Length = 249
Score = 34.2 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH--SIKDVVGLVTRRVLLPDHVI 82
+V I + + +K + V + ++ ++ + I
Sbjct: 36 TTDVIVAKQDIKFKSEITKDDIKVVSVRKDIAVHDALKPEDVQLLLNKHASIDIKKGTQI 95
Query: 83 PLSVLHRPYVISR 95
++ +I
Sbjct: 96 YSKLVDTYNLIPN 108
>gi|17549310|ref|NP_522650.1| signal peptide protein [Ralstonia solanacearum GMI1000]
gi|17431562|emb|CAD18240.1| probable flp pilus assembly cpab; signal peptide protein [Ralstonia
solanacearum GMI1000]
Length = 208
Score = 34.2 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 32/102 (31%), Gaps = 6/102 (5%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + AG+ + ++ + + + + VVG + + S
Sbjct: 48 PVVVTVKPLEAGKPITADQVGVESLPIN--PADAFSEVNKVVGREPIVPIGIGVPLIGSQ 105
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
L + +V + +T+ + GD + V
Sbjct: 106 LSSGLAL----QVALGQRAVAITVDEVVGVGNRVMPGDYVDV 143
>gi|126439530|ref|YP_001058806.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
668]
gi|126219023|gb|ABN82529.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
668]
Length = 299
Score = 34.2 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + + AG+ + LK Q + V G + + +
Sbjct: 46 MVPVVVAARALPAGQPIPADALKVQQAPTPIA--GAFPNPMLVTGRIPASDIGAQAPVLE 103
Query: 85 SVLH 88
S L
Sbjct: 104 SELM 107
>gi|53723521|ref|YP_102955.1| hypothetical protein BMA1291 [Burkholderia mallei ATCC 23344]
gi|67641295|ref|ZP_00440076.1| Flp pilus assembly protein CpaB [Burkholderia mallei GB8 horse 4]
gi|121600825|ref|YP_993099.1| hypothetical protein BMASAVP1_A1779 [Burkholderia mallei SAVP1]
gi|124385109|ref|YP_001026124.1| hypothetical protein BMA10229_A0116 [Burkholderia mallei NCTC
10229]
gi|126449256|ref|YP_001080604.1| putative pilus assembly protein CpaB [Burkholderia mallei NCTC
10247]
gi|167002483|ref|ZP_02268273.1| putative pilus assembly protein CpaB [Burkholderia mallei PRL-20]
gi|254177688|ref|ZP_04884343.1| putative pilus assembly protein CpaB [Burkholderia mallei ATCC
10399]
gi|254199897|ref|ZP_04906263.1| putative pilus assembly protein CpaB [Burkholderia mallei FMH]
gi|254206229|ref|ZP_04912581.1| putative pilus assembly protein CpaB [Burkholderia mallei JHU]
gi|254358354|ref|ZP_04974627.1| putative pilus assembly protein CpaB [Burkholderia mallei
2002721280]
gi|52426944|gb|AAU47537.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|121229635|gb|ABM52153.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|126242126|gb|ABO05219.1| putative pilus assembly protein CpaB [Burkholderia mallei NCTC
10247]
gi|147749493|gb|EDK56567.1| putative pilus assembly protein CpaB [Burkholderia mallei FMH]
gi|147753672|gb|EDK60737.1| putative pilus assembly protein CpaB [Burkholderia mallei JHU]
gi|148027481|gb|EDK85502.1| putative pilus assembly protein CpaB [Burkholderia mallei
2002721280]
gi|160698727|gb|EDP88697.1| putative pilus assembly protein CpaB [Burkholderia mallei ATCC
10399]
gi|238522204|gb|EEP85650.1| Flp pilus assembly protein CpaB [Burkholderia mallei GB8 horse 4]
gi|243061823|gb|EES44009.1| putative pilus assembly protein CpaB [Burkholderia mallei PRL-20]
Length = 299
Score = 34.2 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + + AG+ + LK Q + V G + + +
Sbjct: 46 MVPVVVAARALPAGQPIPADALKVQQTPTPIA--GAFPNPMLVTGRIPASDIGAQAPVLE 103
Query: 85 S 85
S
Sbjct: 104 S 104
>gi|269960732|ref|ZP_06175103.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834396|gb|EEZ88484.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 916
Score = 34.2 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 14/90 (15%)
Query: 30 VPSVVINAGEVLN-------ESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
VP+ + G+V+ + ++ ++ +I + V I
Sbjct: 130 VPARTLVPGDVIKISTGDILPADVRIVEANRLSIDEAALTGESEPV-------TKQVSAI 182
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTIST 112
+ I+ G I+ T + I T
Sbjct: 183 HSKQVSLGDQINMGFMTTIVTTGSGLGIVT 212
>gi|167845918|ref|ZP_02471426.1| Flp pilus assembly protein CpaB family [Burkholderia pseudomallei
B7210]
Length = 207
Score = 34.2 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + + AG+ + LK Q + V G + + +
Sbjct: 46 MVPVVVAARALPAGQPIPADALKVQQTPTPIA--GAFPNPMLVTGRIPASDIGAQAPVLE 103
Query: 85 SVLH 88
S L
Sbjct: 104 SELM 107
>gi|167570106|ref|ZP_02362980.1| Flp pilus assembly protein CpaB family [Burkholderia oklahomensis
C6786]
Length = 168
Score = 34.2 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
VV + + G+ + LK Q+ S + V G + ++ + +
Sbjct: 1 PVVVATRALPTGQPIPADALKVQQMPASIA--GAFSNPALVTGRIPASDIVAQAPVLEN 57
>gi|53719510|ref|YP_108496.1| putative membrane fimbriae assembly protein [Burkholderia
pseudomallei K96243]
gi|126451660|ref|YP_001066057.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1106a]
gi|134282337|ref|ZP_01769042.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
305]
gi|167902900|ref|ZP_02490105.1| Flp pilus assembly protein CpaB family [Burkholderia pseudomallei
NCTC 13177]
gi|167911137|ref|ZP_02498228.1| Flp pilus assembly protein CpaB family [Burkholderia pseudomallei
112]
gi|167919160|ref|ZP_02506251.1| Flp pilus assembly protein CpaB family [Burkholderia pseudomallei
BCC215]
gi|217423802|ref|ZP_03455303.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
576]
gi|226199689|ref|ZP_03795242.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
Pakistan 9]
gi|237812066|ref|YP_002896517.1| Flp pilus assembly protein CpaB [Burkholderia pseudomallei MSHR346]
gi|242315361|ref|ZP_04814377.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1106b]
gi|254179958|ref|ZP_04886557.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1655]
gi|254188632|ref|ZP_04895143.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
Pasteur 52237]
gi|254197581|ref|ZP_04904003.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
S13]
gi|254259533|ref|ZP_04950587.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1710a]
gi|52209924|emb|CAH35896.1| putative membrane fimbriae assembly protein [Burkholderia
pseudomallei K96243]
gi|126225302|gb|ABN88842.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1106a]
gi|134246375|gb|EBA46464.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
305]
gi|157936311|gb|EDO91981.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
Pasteur 52237]
gi|169654322|gb|EDS87015.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
S13]
gi|184210498|gb|EDU07541.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1655]
gi|217393660|gb|EEC33681.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
576]
gi|225928275|gb|EEH24309.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
Pakistan 9]
gi|237503330|gb|ACQ95648.1| Flp pilus assembly protein CpaB [Burkholderia pseudomallei MSHR346]
gi|242138600|gb|EES25002.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1106b]
gi|254218222|gb|EET07606.1| putative pilus assembly protein CpaB [Burkholderia pseudomallei
1710a]
Length = 299
Score = 34.2 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + + AG+ + LK Q + V G + + +
Sbjct: 46 MVPVVVAARALPAGQPIPADALKVQQTPTPIA--GAFPNPMLVTGRIPASDIGAQAPVLE 103
Query: 85 SVLH 88
S L
Sbjct: 104 SELM 107
>gi|157372624|ref|YP_001480613.1| p-hydroxybenzoic acid efflux subunit AaeA [Serratia proteamaculans
568]
gi|254801259|sp|A8GK45|AAEA_SERP5 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
Short=pHBA efflux pump protein A
gi|157324388|gb|ABV43485.1| efflux transporter, RND family, MFP subunit [Serratia
proteamaculans 568]
Length = 311
Score = 33.8 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 38/107 (35%), Gaps = 2/107 (1%)
Query: 39 EVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAK 98
E ++++ V + + + + T D I +H I+RG+
Sbjct: 122 EEIDQANNVLQTVEHQLAKAVATRELAKLDLERTTVRAPADGWITNLNVHAGEYITRGSV 181
Query: 99 VRIILTQGNMTISTAGI--ALSDASIGDVIAVKNIDTGVMVSGSVVD 143
++ + + I L+ + GD + + + ++ G+V
Sbjct: 182 AVALVKKNSFYILAYLEETKLNGLNKGDRAEITPLGSNRIMHGTVDS 228
>gi|297161942|gb|ADI11654.1| SAF domain protein [Streptomyces bingchenggensis BCW-1]
Length = 203
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
Query: 8 LFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDV 67
+ S +L + G +V + + AG VL L++++V S A V
Sbjct: 19 VVVSAVGFALVASAVGERGQVLVLARDVPAGHVLTAGDLRQVEV-ASETGVVAAAGRSGV 77
Query: 68 VGLVTRRVLLPDHVIPLSVLHRPYVIS 94
+G R L+ ++
Sbjct: 78 LGRRARVPLVAGSLLAPGQFGGRRAFP 104
>gi|116620531|ref|YP_822687.1| SAF domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223693|gb|ABJ82402.1| SAF domain [Candidatus Solibacter usitatus Ellin6076]
Length = 299
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Query: 21 FASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDH 80
A + + + + G +L E +K + +KDV+G +
Sbjct: 36 AAPTMVQVALATRNLEVGTLLKEDDVKLSDWP-GAVPIGATAQVKDVLGRGVTTAIFAKE 94
Query: 81 VIPLSVLHRP 90
I S L
Sbjct: 95 PIIESRLAPK 104
>gi|94309565|ref|YP_582775.1| OmpA/MotB [Cupriavidus metallidurans CH34]
gi|93353417|gb|ABF07506.1| putative OmpA/MotB (family of outer membrane porins precursor)
[Cupriavidus metallidurans CH34]
Length = 572
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 34/112 (30%), Gaps = 4/112 (3%)
Query: 6 FLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS-- 63
+ ++L + + A V VV + + A + + L+ + + + GN +
Sbjct: 27 WQPAWNLLLGTFV--IAVVGTAIVVATRRVRARQRASRDVLEAINASLDALPGNIRRNTP 84
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGI 115
+ VVG + + + R+ + G
Sbjct: 85 LALVVGDRAGAPARAFGEALVQITDTAIWVRVDDSTRLAHVADALKRWREGQ 136
>gi|186682720|ref|YP_001865916.1| multi-sensor signal transduction histidine kinase [Nostoc
punctiforme PCC 73102]
gi|186465172|gb|ACC80973.1| multi-sensor signal transduction histidine kinase [Nostoc
punctiforme PCC 73102]
Length = 928
Score = 33.8 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 5/112 (4%)
Query: 9 FFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVV 68
F++ ++ LD+ + V +I AG L S L E + + +R
Sbjct: 745 AFTVVIVHLDTASRKLTTDIEVAQKLIKAGRDLAHSGLTEARRSIKALRSQLLED----G 800
Query: 69 GLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA 120
+ + S H + G + N + AL++A
Sbjct: 801 NIFNALNRFATQMFSPSNTHIVCQLI-GEIYPLSPDVENNLLRIGQEALTNA 851
>gi|29826723|ref|NP_821357.1| hypothetical protein SAV_183 [Streptomyces avermitilis MA-4680]
gi|29603819|dbj|BAC67892.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 234
Score = 33.8 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 13/130 (10%)
Query: 8 LFFSLYVLSLDSLFASVI-------GHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNY 60
+ SL +++ +V+ V + + G+VL+E L + +
Sbjct: 40 IALSLALIAAGGAGVAVLLLQVGHRTEVVTVARDVQVGQVLSEEDLGKASIALDPAVKAV 99
Query: 61 -AHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRG-AKVRIILTQGNMTISTAGIALS 118
A + VVG L P ++ S + ++ G V I L + AL
Sbjct: 100 RAGDLDSVVGKRAAVELRPGSLLAPSQVTEDSLVKAGEQLVPIGLKSEQV----PATALV 155
Query: 119 DASIGDVIAV 128
+++ V
Sbjct: 156 PGQKVELVHV 165
>gi|296391004|ref|ZP_06880479.1| Flp pilus assembly protein CpaB [Pseudomonas aeruginosa PAb1]
Length = 303
Score = 33.8 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 32/105 (30%), Gaps = 8/105 (7%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V S + A V+ + L + ++G + ++ +
Sbjct: 57 PVLVASRDLPALAVIGKDDLSVEL--LRTAPVGSYDRPEALLGKRVWVAVPAGSILSAAT 114
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK 129
L ++R I + M I+ + + GD + V
Sbjct: 115 LEPGGPLAR----TIRPDERAMAIAVDEVVGGGGFVLPGDYVDVM 155
>gi|188592031|ref|YP_001796629.1| flp pilus assembly cpab [Cupriavidus taiwanensis LMG 19424]
gi|170938405|emb|CAP63392.1| putative Flp pilus assembly CpaB [Cupriavidus taiwanensis LMG
19424]
Length = 316
Score = 33.8 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 33/117 (28%), Gaps = 10/117 (8%)
Query: 14 VLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTR 73
S A + VV + AG+ L+ LK + + V G V
Sbjct: 32 AQPAASAGARPMHAVVVTTRPAEAGKPLDAEALKVEMLPID--PAGAYRDVARVTGQVPL 89
Query: 74 RVLLPDHVIPLSVLHRPYV--ISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAV 128
L + + S L + G + + + + GD + V
Sbjct: 90 VALGANVPVLESQLLSGLAAQVPEGERAVAVSVDEVIGVGNQV------QPGDYVDV 140
>gi|167620225|ref|ZP_02388856.1| Flp pilus assembly protein CpaB family [Burkholderia thailandensis
Bt4]
Length = 266
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ VV + + AG+ + LK Q + V G + ++ +
Sbjct: 46 LVPVVVATRALPAGQPIPADALKVQQTPAPIA--GAFPNPTLVTGRIPANDIVAQAPVLE 103
Query: 85 S 85
S
Sbjct: 104 S 104
>gi|254229331|ref|ZP_04922748.1| Flp pilus assembly protein CpaB [Vibrio sp. Ex25]
gi|262393416|ref|YP_003285270.1| flp pilus assembly protein RcpC/CpaB [Vibrio sp. Ex25]
gi|151938139|gb|EDN56980.1| Flp pilus assembly protein CpaB [Vibrio sp. Ex25]
gi|262337010|gb|ACY50805.1| flp pilus assembly protein RcpC/CpaB [Vibrio sp. Ex25]
Length = 251
Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 21/59 (35%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
+V ++ + G +L+E L + I + +G + + ++ +
Sbjct: 45 PVLVAAMELEPGTILSEKHLSTKLMEVDWIDDETLKVQEQALGRIVANTIYAGELVNSN 103
>gi|307244531|ref|ZP_07526636.1| chaperonin HslO [Peptostreptococcus stomatis DSM 17678]
gi|306492058|gb|EFM64106.1| chaperonin HslO [Peptostreptococcus stomatis DSM 17678]
Length = 291
Score = 33.8 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 59 NYAHSIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALS 118
N + + + + + + ++G K+ +I+ G + + +
Sbjct: 24 NMVETARGFHNTTKVATAALGRTLTATSMMGLMMKNKGDKITVIIKGGGPIGTILTSSNA 83
Query: 119 DASI-GDV----IAVKNIDTGVM-VSGSVVDTGTVRVV 150
+ + G V + V+N +G + V+G+V + GT+RV+
Sbjct: 84 NGIVKGYVTNPDVEVENYASGKLNVAGAVGNQGTIRVI 121
>gi|327189766|gb|EGE56910.1| putative cpaB pilus assembly protein [Rhizobium etli CNPAF512]
Length = 304
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 40/125 (32%), Gaps = 15/125 (12%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + + G+ + LK + ++ SI+ VVG + I
Sbjct: 46 TLVVAAKPMRFGDRIRSENLKAIPWPSNETPAGSFVSIETVVGND-DQPRYAMAAIDP-- 102
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
G V G +T AL I V N G V+G V +
Sbjct: 103 ---------GEPVLSSKITGAGERATLSAALDQGMKAVSIRV-NDVLG--VAGFVRPSDR 150
Query: 147 VRVVV 151
V V++
Sbjct: 151 VDVLL 155
>gi|294139869|ref|YP_003555847.1| Flp pilus assembly protein CpaB [Shewanella violacea DSS12]
gi|293326338|dbj|BAJ01069.1| Flp pilus assembly protein CpaB, putative [Shewanella violacea
DSS12]
Length = 288
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 54/157 (34%), Gaps = 29/157 (18%)
Query: 3 CVRFLLFFSLY--VLSLDSLFASVIGH--------------AVVPSVVINAGEVLNESRL 46
V+ L++FS++ + L L+ S+ +V +I +G+ + S
Sbjct: 2 TVKRLMYFSVFISLAGLIGLYLSISAPQKQINIKTENVRHEILVAKQLIKSGQRFSASLF 61
Query: 47 KEMQVTNSNIRG--NYAH----SIKDVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVR 100
+ + + +Y I V H++ LS +P G +
Sbjct: 62 EWQALNEDQLTNLVDYIDRDKFDILKFNDSVLVSSFTAGHIMSLSDFLKP---EEGGFLS 118
Query: 101 IILTQGNMTISTAG--IALSDASI--GDVIAVKNIDT 133
+ L G +S + + + GD + V + +
Sbjct: 119 VSLRPGYRAVSVPVDQVTANSGLVGPGDFVDVLLLAS 155
>gi|220913391|ref|YP_002488700.1| SAF domain protein [Arthrobacter chlorophenolicus A6]
gi|219860269|gb|ACL40611.1| SAF domain protein [Arthrobacter chlorophenolicus A6]
Length = 251
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Query: 28 AVVPSVVINAGEVLNE--SRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
+V I AG +N+ + L V + I S+ G V L+P +
Sbjct: 42 VLVVEKPIPAGTPINDMTASLVIEDVPATAIAPTALTSLDSKAGTVAAVDLVPGEQLLAE 101
Query: 86 VLHRPYVISRGAKVRI 101
L P + V+I
Sbjct: 102 RLVAPEALKAEGGVQI 117
>gi|107100111|ref|ZP_01364029.1| hypothetical protein PaerPA_01001132 [Pseudomonas aeruginosa PACS2]
gi|254244884|ref|ZP_04938206.1| hypothetical protein PA2G_05757 [Pseudomonas aeruginosa 2192]
gi|126198262|gb|EAZ62325.1| hypothetical protein PA2G_05757 [Pseudomonas aeruginosa 2192]
Length = 303
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 32/105 (30%), Gaps = 8/105 (7%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V S + A V+ + L + ++G + ++ +
Sbjct: 57 PVLVASRDLPALAVIGKDDLSVEL--LRTAPVGSYDRPEALLGKRVWVAVPAGSILSAAA 114
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK 129
L ++R I + M I+ + + GD + V
Sbjct: 115 LEPGGPLAR----TIRPDERAMAIAVDEVVGGGGFVLPGDYVDVM 155
>gi|187251613|ref|YP_001876095.1| pilus assembly protein [Elusimicrobium minutum Pei191]
gi|186971773|gb|ACC98758.1| Pilus assembly protein [Elusimicrobium minutum Pei191]
Length = 253
Score = 33.8 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 15/139 (10%), Positives = 44/139 (31%), Gaps = 14/139 (10%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAH-----SIKDVVGLVTRRVLL 77
S + V+ + +V+ + L +++ N ++ + I + + R+ +
Sbjct: 34 SKLERVVIAIRDLPERKVITKGDLGVIEMPNKFLQKDAFTVTRDSDITKLENNLVTRIAI 93
Query: 78 PDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA-SIGDVIAV-------- 128
P G R+ ++ ++++ D + V
Sbjct: 94 PKGNQVSKAALTSLSPEAGLSARVSPLWRGFVLTDVPSSVANLIKPDDWVDVLLTFDAYM 153
Query: 129 KNIDTGVMVSGSVVDTGTV 147
KN ++ +++ V
Sbjct: 154 KNTGQKEKITATILQRIKV 172
>gi|83943940|ref|ZP_00956397.1| CpaB family protein [Sulfitobacter sp. EE-36]
gi|83845187|gb|EAP83067.1| CpaB family protein [Sulfitobacter sp. EE-36]
Length = 287
Score = 33.8 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 28/109 (25%), Gaps = 9/109 (8%)
Query: 28 AVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVG------LVTRRVLLPDHV 81
V + + G+ L ++++ + I + V R + D
Sbjct: 50 VYVANGPLKYGQRLTREDVRQVNWPENAIPEGTFIEEAALFPENSDDLRVVLRAMEKDEA 109
Query: 82 IPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDA--SIGDVIAV 128
I + G ++ I + GD + V
Sbjct: 110 IMAVKVTE-PGADTGLTSQLERGSRAFAIRVDVSSGVSGFLRPGDRVDV 157
>gi|218681775|ref|ZP_03529537.1| N-acylneuraminate-9-phosphate synthase [Rhizobium etli CIAT 894]
Length = 228
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 29 VVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSVL 87
VV + + AG+V++ + + ++ + G R L D V+ S L
Sbjct: 173 VVLNRPLKAGDVISAGDISVKRPGTGIEP----KHLETLAGRRVIRNLDSDAVLQWSDL 227
>gi|187251719|ref|YP_001876201.1| SAF domain-containing protein [Elusimicrobium minutum Pei191]
gi|186971879|gb|ACC98864.1| SAF domain protein [Elusimicrobium minutum Pei191]
Length = 207
Score = 33.8 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Query: 4 VRFLLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHS 63
+ F + F V + V + IN G V+ + L +++
Sbjct: 29 IMFAVLFIFAHKKRMHETKHV--NIFVAAEDINKGTVITQRLLSPVKMIAHEPGAFLVGD 86
Query: 64 IKDVVGLVTRRVLLPDHVIPLSVLHRPYVI 93
I+ ++G ++ + ++ VI
Sbjct: 87 IQLLLGSYALVDIVQGSQMTKHIITAEPVI 116
>gi|114568969|ref|YP_755649.1| Flp pilus assembly CpaB [Maricaulis maris MCS10]
gi|114339431|gb|ABI64711.1| Flp pilus assembly CpaB [Maricaulis maris MCS10]
Length = 278
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 30/113 (26%), Gaps = 16/113 (14%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYA-----HSIKDVVGLVTRRVLLPDHV 81
+ + GE ++ + + + Y +I D G V R +
Sbjct: 45 RILAARRDVEIGERISAADFYWQAWPDEALAPGYIVENRGQTIADFAGSVVRAPISQGEP 104
Query: 82 IPLSVLHRPYVISRGAK-VRIILTQGNMTISTAGIALSDASIG-----DVIAV 128
I ++ G + M I+ + G D + V
Sbjct: 105 ITGR-----RLVQPGDAGFMAAVLTPGMRAVAVPISAETGAGGFILPNDRVDV 152
>gi|256393174|ref|YP_003114738.1| SAF domain-containing protein [Catenulispora acidiphila DSM 44928]
gi|256359400|gb|ACU72897.1| SAF domain protein [Catenulispora acidiphila DSM 44928]
Length = 230
Score = 33.8 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 44/137 (32%), Gaps = 15/137 (10%)
Query: 2 DCVRFLLFFSLYVLSLDSLFASVIGH------AVVPSVVINAGEVLNESRLKEMQVTNSN 55
V + + + FA+ + + + AG+V+ S L +QV +
Sbjct: 35 RSVPYAVLGGALAVVFAVGFAATSLNFGGKQSYLAVVKPVRAGQVIQASDLATVQVATNA 94
Query: 56 IRGNYAHSIK-DVVGLVTRRVLLPDHVIPLSVLHRPYVISRGAKVRIILTQGN---MTI- 110
G S + VVG L P ++ + G +V + + M +
Sbjct: 95 GLGLIPASAQNSVVGQAAALPLAPGALVTRREVGPASFPPAGQQVIAVAVKTGQYPMELA 154
Query: 111 ----STAGIALSDASIG 123
G A + S G
Sbjct: 155 PGAHVIVGTAPASGSSG 171
>gi|330895616|gb|EGH27923.1| Flp pilus assembly protein CpaB [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 115
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
+ VV + I A + L ++ + +I +VG + R L
Sbjct: 64 NVVVLARDIPAYTAITADDLTIERLKVA--PPGSFEAIDKIVGRSSWRTLTA 113
>gi|325275758|ref|ZP_08141635.1| Flp pilus assembly protein CpaB [Pseudomonas sp. TJI-51]
gi|324099109|gb|EGB97078.1| Flp pilus assembly protein CpaB [Pseudomonas sp. TJI-51]
Length = 318
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 34/112 (30%), Gaps = 9/112 (8%)
Query: 19 SLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
+ VV + A L E + ++ + + V+G + R L
Sbjct: 55 PVEVPRTA-VVVLRKSVPANTPLTEDDVLVERLQVA--PAGAYQQVAQVIGRSSARPLAA 111
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAV 128
+ + ++R I + + + + + + GD + V
Sbjct: 112 GTWLEEASFQAGGPLAR----MIRAHERAVALGVDEVVGAAGQLRPGDYVDV 159
>gi|86360579|ref|YP_472467.1| putative cpaB pilus assembly protein [Rhizobium etli CFN 42]
gi|86284681|gb|ABC93740.1| putative cpaB pilus assembly protein [Rhizobium etli CFN 42]
Length = 304
Score = 33.8 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 40/125 (32%), Gaps = 15/125 (12%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
VV + + G+ + L+ + ++ SI VVG +
Sbjct: 46 TLVVAATPMRFGDRIRSENLRAIPWPSNETPTGSFVSIDLVVGNDAQP------------ 93
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGVMVSGSVVDTGT 146
+ I G V G +T AL I V N G V+G V +
Sbjct: 94 RYAMAAIDPGEPVLSSKITGAGERATLSAALDQGMKAVSIRV-NDVLG--VAGFVRPSDR 150
Query: 147 VRVVV 151
V V++
Sbjct: 151 VDVLL 155
>gi|302343420|ref|YP_003807949.1| Flp pilus assembly protein CpaB [Desulfarculus baarsii DSM 2075]
gi|301640033|gb|ADK85355.1| Flp pilus assembly protein CpaB [Desulfarculus baarsii DSM 2075]
Length = 279
Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 3/107 (2%)
Query: 24 VIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIP 83
VV +V + AG L+ RL Q + ++K ++G V ++ ++ +
Sbjct: 43 RTAPLVVAAVDLPAGLELSAGRLAVAQWPVEARPPGHFGAVKPLLGRVLQQPVVKGEPLL 102
Query: 84 LSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDAS--IGDVIAV 128
L + I +TIS + +GD + V
Sbjct: 103 AGKLSPEGAAAG-LAAAIKPGWRAVTISADEVVGVAGYLKVGDRVDV 148
>gi|256424960|ref|YP_003125613.1| hypothetical protein Cpin_5998 [Chitinophaga pinensis DSM 2588]
gi|256039868|gb|ACU63412.1| hypothetical protein Cpin_5998 [Chitinophaga pinensis DSM 2588]
Length = 288
Score = 33.8 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 12/134 (8%), Positives = 40/134 (29%), Gaps = 9/134 (6%)
Query: 16 SLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRV 75
+ S + + ++ G+ M + + + + + G+ V
Sbjct: 13 GNITQLVSAQNKVL-LKISMDPGKTYKTQMTTIMDMEMTVKGDSAIINQLNASGMQLPIV 71
Query: 76 LLPDHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIGDVIAVKNIDTGV 135
+ + + + + Q +M+ S +G + + +N
Sbjct: 72 MHMKQQFANTTKTGQQRADKKTPLTMTFDQMSMSQSVSGQ--------ETVQNENPFADA 123
Query: 136 MVSGSVVDTGTVRV 149
++ G+ G + +
Sbjct: 124 VIEGTTNGDGKISI 137
>gi|153834044|ref|ZP_01986711.1| Flp pilus assembly protein CpaB [Vibrio harveyi HY01]
gi|148869599|gb|EDL68589.1| Flp pilus assembly protein CpaB [Vibrio harveyi HY01]
Length = 251
Score = 33.8 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 21/59 (35%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLS 85
+V ++ + G +L E L + I + + +G + + ++ +
Sbjct: 45 PVLVAAMELEPGTILEEKHLTTKLMEVDWIEESTLKVSEQALGRIVANTIYSGEMVNPN 103
>gi|146338124|ref|YP_001203172.1| putative pilus assembly protein CpaB [Bradyrhizobium sp. ORS278]
gi|146190930|emb|CAL74935.1| Putative pilus assembly protein, cpaB [Bradyrhizobium sp. ORS278]
Length = 248
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 46/147 (31%), Gaps = 25/147 (17%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIK------DVVGLVTRRVLLP 78
+V I G+ + L+ S ++ + +V G + R +
Sbjct: 25 TVDVLVAKADIGLGQSIKPELLQWQSWPASTASSSFIRRNERPEGQNEVTGTIARAPFIA 84
Query: 79 DHVIPLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASIG-----DVIAV----- 128
I L + G+ + M + I+ + G D + V
Sbjct: 85 GEPIREQKLVKSD----GSGFMAAILPAGMRAVSTEISPETGAGGFILPNDRVDVILSKR 140
Query: 129 -KNID---TGVMVSGSVVDTGTVRVVV 151
+N D G +VS ++ +RV+
Sbjct: 141 ERNPDQPNAGDVVSSEIILAN-IRVLA 166
>gi|315654208|ref|ZP_07907116.1| SAF domain protein [Mobiluncus curtisii ATCC 51333]
gi|315491243|gb|EFU80860.1| SAF domain protein [Mobiluncus curtisii ATCC 51333]
Length = 198
Score = 33.8 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%)
Query: 7 LLFFSLYVLSLDSLFASVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKD 66
L +++V+ L VV + AG + +K + S + N+
Sbjct: 17 LAILAVFVVVTLFLPEKAAATVVVVKHEVCAGCEITAQNVKLSALAPSAVPQNHFQKADR 76
Query: 67 VVGLVTRRVLLPDHVIPLSVLHRPYV 92
V+G L V+ ++L V
Sbjct: 77 VIGKTAAVSLTSGTVLQPALLVENAV 102
>gi|254429646|ref|ZP_05043353.1| Flp pilus assembly protein CpaB [Alcanivorax sp. DG881]
gi|196195815|gb|EDX90774.1| Flp pilus assembly protein CpaB [Alcanivorax sp. DG881]
Length = 278
Score = 33.4 bits (75), Expect = 9.3, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
V + +N G+ L+E L + N + + VVG R+ P ++ +
Sbjct: 47 RYWVVTQSLNVGDTLDEESLAVVSSPAPIA--NVLTADETVVGKELRQFARPGELLSRNH 104
Query: 87 LHR 89
L
Sbjct: 105 LEP 107
>gi|119717338|ref|YP_924303.1| SAF domain-containing protein [Nocardioides sp. JS614]
gi|119537999|gb|ABL82616.1| SAF domain [Nocardioides sp. JS614]
Length = 244
Score = 33.4 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Query: 27 HAVVPSVVINAGEVLN----ESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+V + I AGE + ++ V + S+ G V + P +
Sbjct: 41 DVLVATQPIAAGETVEAARAADKIGTRSVALRDRLDGALTSLDGHAGQVALVPIQPGEQL 100
Query: 83 PLSVL 87
+ L
Sbjct: 101 LPAKL 105
>gi|330953052|gb|EGH53312.1| Flp pilus assembly protein CpaB [Pseudomonas syringae Cit 7]
Length = 319
Score = 33.4 bits (75), Expect = 9.5, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 44/136 (32%), Gaps = 19/136 (13%)
Query: 23 SVIGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVI 82
+V + V + + A + L ++ + +I +VG + R L +
Sbjct: 61 AVRHNVVGLARDVPAYTAITADDLTIERLKVA--PPGSFEAIDKIVGRSSWRTLTAGSWL 118
Query: 83 PLSVLHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK----------N 130
S ++R I + + + + + + GD + V N
Sbjct: 119 TESSFDTGGTLAR----MIRPHERALALQVDEVTGASGQLSPGDYVDVLLYLPEDVSNPN 174
Query: 131 IDTGVMVSG-SVVDTG 145
+ V+V ++ G
Sbjct: 175 RSSQVVVPALRILGVG 190
>gi|258515698|ref|YP_003191920.1| Flp pilus assembly protein CpaB [Desulfotomaculum acetoxidans DSM
771]
gi|257779403|gb|ACV63297.1| Flp pilus assembly protein CpaB [Desulfotomaculum acetoxidans DSM
771]
Length = 247
Score = 33.4 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 23 SVIGHAVVPSVVINAGEVLNE----SRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLP 78
+ + VV V I A + E L + + I+ + ++++G VTR V+
Sbjct: 35 TAVLPVVVAKVEIPAYTPITEENEKEMLAVENIPKAAIKQGMFPNSQNLIGKVTRTVIPA 94
Query: 79 DHVIPLS 85
+ +
Sbjct: 95 GYPVSKD 101
>gi|218893397|ref|YP_002442266.1| RcpC [Pseudomonas aeruginosa LESB58]
gi|218773625|emb|CAW29439.1| RcpC [Pseudomonas aeruginosa LESB58]
Length = 303
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 32/105 (30%), Gaps = 8/105 (7%)
Query: 27 HAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPLSV 86
+V S + A V+ + L + ++G + ++ +
Sbjct: 57 PVLVASRDLPALAVIGKDDLSVEL--LRTAPVGSYDRPEALLGKRVWVAVPAGSILSAAT 114
Query: 87 LHRPYVISRGAKVRIILTQGNMTISTAGIALSDASI--GDVIAVK 129
L ++R I + M I+ + + GD + V
Sbjct: 115 LEPGGPLAR----TIRPDERAMAIAVDEVVGGGGFVLPGDYVDVM 155
>gi|167624206|ref|YP_001674500.1| SAF domain-containing protein [Shewanella halifaxensis HAW-EB4]
gi|167354228|gb|ABZ76841.1| SAF domain protein [Shewanella halifaxensis HAW-EB4]
Length = 270
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 19/66 (28%)
Query: 25 IGHAVVPSVVINAGEVLNESRLKEMQVTNSNIRGNYAHSIKDVVGLVTRRVLLPDHVIPL 84
+ + + G ++ L V + + I + G V + L V+
Sbjct: 39 TSNVITMVTEVPLGTIIERKHLALTPVPENLVPKGAITDITEAEGQVVKHRLYQGEVLRK 98
Query: 85 SVLHRP 90
L
Sbjct: 99 ERLTPK 104
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.307 0.144 0.361
Lambda K H
0.267 0.0444 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,305,833,504
Number of Sequences: 14124377
Number of extensions: 50981326
Number of successful extensions: 170035
Number of sequences better than 10.0: 1879
Number of HSP's better than 10.0 without gapping: 1514
Number of HSP's successfully gapped in prelim test: 365
Number of HSP's that attempted gapping in prelim test: 167487
Number of HSP's gapped (non-prelim): 1946
length of query: 152
length of database: 4,842,793,630
effective HSP length: 115
effective length of query: 37
effective length of database: 3,218,490,275
effective search space: 119084140175
effective search space used: 119084140175
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 76 (33.8 bits)