HHsearch alignment for GI: 254780379 and conserved domain: PRK01482
>PRK01482 fliE flagellar hook-basal body protein FliE; Reviewed.
Probab=99.38 E-value=2.5e-12 Score=92.83 Aligned_cols=73 Identities=11% Similarity=0.194 Sum_probs=67.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 88866599999999999999999999999999814--89899999999999999999999999999999999618
Q gi|254780379|r 34 GSSPISFSALLQDMAKGAIGDMEKAENVSLAALQG--KTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKM 106 (108)
Q Consensus 34 ~~~~~sF~~~L~~~i~~vn~~q~~a~~~~~~~~~G--~~dl~~vmia~~kA~lsl~~~vqVRnK~v~AYqeImrM 106 (108)
T Consensus 33 n~~a~sF~~~lln~~~~vN~sQl~~~k~~eq~i~~P~SVDVHDv~IA~~kA~msLs~~k~v~dr~Vkayqdi~n~ 107 (108)
T PRK01482 33 NKKAKTFKDTLLNAIDDVNNSQLNVSKVTEQAILDPESVDVHDVTIAMAKANMNLSIAKAVVERSIKAYQDIINI 107 (108)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 223656999999999887387604999988652695644299999999874003899999999999999998714