HHsearch alignment for GI: 254780379 and conserved domain: PRK01699
>PRK01699 fliE flagellar hook-basal body protein FliE; Reviewed.
Probab=99.64 E-value=1.8e-15 Score=111.49 Aligned_cols=69 Identities=14% Similarity=0.186 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999999999999999999981489-89999999999999999999999999999999961889
Q gi|254780379|r 40 FSALLQDMAKGAIGDMEKAENVSLAALQGKT-SMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108 (108)
Q Consensus 40 F~~~L~~~i~~vn~~q~~a~~~~~~~~~G~~-dl~~vmia~~kA~lsl~~~vqVRnK~v~AYqeImrMqV 108 (108)
T Consensus 30 ~Gk~F~~ll~d~N~tQnna~~Av~~l~T~g~gn~hdvlIqmkKAes~mktaa~VRdn~IeaYKelinmQi 99 (99)
T PRK01699 30 EGKKFIDLLEDMNQTQNNAQTAVYDLLTKGVGETHDVLIQQKKAESQMKTAALVRDNLIENYKSLINMQI 99 (99)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 1026999999999988879999999884377729999999999999999999999999999999986129