HHsearch alignment for GI: 254780379 and conserved domain: PRK12728
>PRK12728 fliE flagellar hook-basal body protein FliE; Provisional.
Probab=99.93 E-value=2.4e-25 Score=169.96 Aligned_cols=77 Identities=22% Similarity=0.396 Sum_probs=72.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 78888665999999999999999999999999998148-989999999999999999999999999999999961889
Q gi|254780379|r 32 EGGSSPISFSALLQDMAKGAIGDMEKAENVSLAALQGK-TSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI 108 (108)
Q Consensus 32 ~~~~~~~sF~~~L~~~i~~vn~~q~~a~~~~~~~~~G~-~dl~~vmia~~kA~lsl~~~vqVRnK~v~AYqeImrMqV 108 (108)
T Consensus 20 ~p~~~~~sF~~~L~~al~~Vn~~Q~~a~~~~~~~~~G~~~~lhevmia~qkA~ls~q~~~qVRNK~v~AYqEIMrMqv 97 (97)
T PRK12728 20 TPSEKQVSFSDFLKEALNKVNDKQVEADNSTEALIKGEDVDLHDVMIAAQKASISLQLAVQVRNKVVEAYQEIMRMQL 97 (97)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999998889999999999999999999999999984898889999999999999999999999999999999982889