HHsearch alignment for GI: 254780380 and conserved domain: COG1558

Probab=100.00  E-value=0  Score=286.49  Aligned_cols=131  Identities=44%  Similarity=0.664  Sum_probs=121.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH---C---CCCCCCEECCCCCCCCC
Q ss_conf             04788885215689999999898887531255556675433201100012343221---0---47542100026543100
Q gi|254780380|r    2 DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---S---GGVRVKKIGVDQSTFVE   75 (134)
Q Consensus         2 ~~l~~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v~~~~~~~~---~---~gv~~~~i~~~~~~~~~   75 (134)
T Consensus         1 msl~~~~niagS~l~AQ~~RmnvissNiANa~St~~~~g~-pYrrk~vvF~~~~~~~~~~~~~~~VkV~~I~eD~s~~~~   79 (137)
T COG1558           1 MSLFSIFNIAGSALSAQSLRLNVISSNIANADSTRTPDGG-PYRRKQVVFSAELFAPTGATGGAGVKVSKIVEDPSPFKL   79 (137)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CEEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCEE
T ss_conf             9216565255477788899989987643035445689998-437545676551345444578863589887606997500


Q ss_pred             CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             0143211125023333056109999999999999999999999999999999999646
Q gi|254780380|r   76 EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR  133 (134)
Q Consensus        76 ~y~P~~p~Ad~~G~v~~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l~i~r  133 (134)
T Consensus        80 ~YdP~hP~Ad~~GYV~~PNVn~v~EM~dmisAsRsYeANv~v~~~~K~m~~~tL~i~~  137 (137)
T COG1558          80 VYDPGHPDADAKGYVKMPNVNVVIEMVDMISASRSYEANVEVLNTAKSMMQKTLELGQ  137 (137)
T ss_pred             EECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             1188998846367556587658999999999999899999999999999999997519