HHsearch alignment for GI: 254780380 and conserved domain: PRK06665
>PRK06665 flgK flagellar hook-associated protein FlgK; Validated.
Probab=98.63 E-value=6.2e-08 Score=60.39 Aligned_cols=46 Identities=28% Similarity=0.471 Sum_probs=42.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 90478888521568999999989888753125555667543320110001234
Q gi|254780380|r 1 MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53 (134)
Q Consensus 1 m~~l~~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v~~~~ 53 (134)
T Consensus 1 M~s~F~~L~ig~sgL~a~Q~aL~ttg~NIANvnT~G-------YsRQ~v~~~a 46 (628)
T PRK06665 1 MDSTFSGIEIGKRSLFAHKQAMQTTGHNISNASKPG-------YSRQRVTMKT 46 (628)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-------CCCEEEEEEC
T ss_conf 985242699999999999999998857664179988-------0521766412