HHsearch alignment for GI: 254780380 and conserved domain: PRK06802

>PRK06802 flgC flagellar basal body rod protein FlgC; Reviewed.
Probab=100.00  E-value=0  Score=280.97  Aligned_cols=130  Identities=28%  Similarity=0.462  Sum_probs=115.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH----------CCCCCCCEECCCC
Q ss_conf             904788885215689999999898887531255556675433201100012343221----------0475421000265
Q gi|254780380|r    1 MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----------SGGVRVKKIGVDQ   70 (134)
Q Consensus         1 m~~l~~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v~~~~~~~~----------~~gv~~~~i~~~~   70 (134)
T Consensus         1 Ms-~~~~~~Ia~Sgl~Aqr~Rm~~ia~NiANa~tt~~~~-g~~y~~k~~vf~~~~~~~~~~~~~~~~~~~V~v~~i~~~~   78 (141)
T PRK06802          1 MS-FNQIYRIAGSAMTAQTIRLNTVASNLANAESPAASA-ATVYKARSPVFSAVYSARTAADPRGVQSAQVQVLDVVEVG   78 (141)
T ss_pred             CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
T ss_conf             96-077888999999999999999999887268889899-9866343332456553443113557788625887543589


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             431000143211125023333056109999999999999999999999999999999999646
Q gi|254780380|r   71 STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR  133 (134)
Q Consensus        71 ~~~~~~y~P~~p~Ad~~G~v~~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l~i~r  133 (134)
T Consensus        79 ~~~~-~YdP~hP~Ad~~GyV~~PnVn~~~EMvdm~~AsRsYeANv~~~~~aK~m~~~aL~IGk  140 (141)
T PRK06802         79 GSVQ-RYEPNNPLANPQGYVFYPDVNVVSEMADMMSASRSFETNVEVLNSVKSMQQSLLKLGE  140 (141)
T ss_pred             CCHH-HCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             7331-1599999989898884689898999999999999999999999999999999998637