HHsearch alignment for GI: 254780380 and conserved domain: PRK07739
>PRK07739 flgK flagellar hook-associated protein FlgK; Validated.
Probab=99.15 E-value=2.1e-11 Score=78.36 Aligned_cols=40 Identities=18% Similarity=0.258 Sum_probs=38.2
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3056109999999999999999999999999999999999
Q gi|254780380|r 91 KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130 (134)
Q Consensus 91 ~~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l~ 130 (134)
T Consensus 454 s~SGVnlDEE~~nLi~~Q~aYqAnAkvItt~demldtLlN 493 (500)
T PRK07739 454 SVSAVSLDEEMTNMIQFQHAYNAAARMITAIDEMLDKIIN 493 (500)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7129669999999999999999999999999999999998