HHsearch alignment for GI: 254780380 and conserved domain: PRK07739
>PRK07739 flgK flagellar hook-associated protein FlgK; Validated.
Probab=98.95 E-value=1.6e-09 Score=68.54 Aligned_cols=48 Identities=31% Similarity=0.437 Sum_probs=44.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 9047888852156899999998988875312555566754332011000123432
Q gi|254780380|r 1 MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55 (134)
Q Consensus 1 m~~l~~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v~~~~~~ 55 (134)
T Consensus 1 M~s~f~~Lnia~SGL~a~Q~~l~vt~~NIANanT~G-------YsRq~v~~~~~~ 48 (500)
T PRK07739 1 MPSTFMGLETARRGLFAQQAALYVTGHNIANANTPG-------YTRQRVNLAATP 48 (500)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-------CCCEEEEEECCC
T ss_conf 984053599999999999999999977573279998-------052056764346