HHsearch alignment for GI: 254780380 and conserved domain: PRK08147
>PRK08147 flgK flagellar hook-associated protein FlgK; Validated.
Probab=98.84 E-value=1.1e-08 Score=64.18 Aligned_cols=42 Identities=19% Similarity=0.366 Sum_probs=39.2
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 305610999999999999999999999999999999999964
Q gi|254780380|r 91 KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132 (134)
Q Consensus 91 ~~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l~i~ 132 (134)
T Consensus 506 svSGVnlDEE~~nLi~~Q~aY~AsArvist~demldtLlni~ 547 (547)
T PRK08147 506 SVSGVNLDEEYGNLQRFQQYYLANAQVLQTASTLFDALLNIR 547 (547)
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 431766999999999999999999999999999999987759