HHsearch alignment for GI: 254780380 and conserved domain: PRK12624

>PRK12624 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=99.39  E-value=3.2e-12  Score=82.51  Aligned_cols=115  Identities=19%  Similarity=0.341  Sum_probs=82.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC---------C-----CEECC-
Q ss_conf             78888521568999999989888753125555667543320110001234322104754---------2-----10002-
Q gi|254780380|r    4 LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR---------V-----KKIGV-   68 (134)
Q Consensus         4 l~~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v~~~~~~~~~~gv~---------~-----~~i~~-   68 (134)
T Consensus         7 f~kT~~lL~kaLd~~~~Rq~vIa~NIAN~dTPg-------YK~~dv~Fe~~L~~al~~~~~~~~~~~~~~~t~~rHi~~~   79 (143)
T PRK12624          7 FMKTQDLLERGMNNSIQKRKVISDNIANADVPH-------FKRSEVIFESMIKRAIESEKIEKEKEVPTQISDERHIQFF   79 (143)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-------CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             026999999999999999999986011268999-------7632062999999998602223444566666872212567


Q ss_pred             -----CCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             -----65431000143211125023333056109999999999999999999999999999999999
Q gi|254780380|r   69 -----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD  130 (134)
Q Consensus        69 -----~~~~~~~~y~P~~p~Ad~~G~v~~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l~  130 (134)
T Consensus        80 ~~~~~~~~~~~~~~d~~t~~-r~DG----NnVDid~Em~~la~N~l~Y~al~~~l~~~~~~lr~vIk  141 (143)
T PRK12624         80 KPLDYREVQPKTNLDYLTTM-RADG----NNVDVEKEVVEASNSQMQYMLMIERLNQNYRLLKQVMR  141 (143)
T ss_pred             CCCCCCCCCCEEEECCCCCC-CCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             88873446742430467655-8998----72689999999999999999999999978999999973