HHsearch alignment for GI: 254780380 and conserved domain: PRK12625

>PRK12625 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=99.49  E-value=3.4e-13  Score=87.58  Aligned_cols=115  Identities=19%  Similarity=0.294  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC----CCCC-----EECC--CCC
Q ss_conf             4788885215689999999898887531255556675433201100012343221047----5421-----0002--654
Q gi|254780380|r    3 YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG----VRVK-----KIGV--DQS   71 (134)
Q Consensus         3 ~l~~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v~~~~~~~~~~g----v~~~-----~i~~--~~~   71 (134)
T Consensus         4 ~fd~~~~~~~~aL~~~~~Rq~via~NIANadTPg-------YKa~dl~Fe~~L~~a~~~~~~~~l~~T~~~H~~~~~~~~   76 (132)
T PRK12625          4 NFDKALGVHQYTLGIRAQRAEVISSNIANADTPH-------YKARDVDFSAAMQAARSQQQGLEMTGSDEKHFDLAALTG   76 (132)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-------CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             4888861789999999999999987143068999-------886538899999998754788866547745467767787


Q ss_pred             CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             3100014321112502333305610999999999999999999999999999999999
Q gi|254780380|r   72 TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL  129 (134)
Q Consensus        72 ~~~~~y~P~~p~Ad~~G~v~~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l  129 (134)
T Consensus        77 ~~~~~~~~~~~~~-~D----GN~Vdid~Em~~~aeN~l~Y~a~~~~l~~k~~~l~~aI  129 (132)
T PRK12625         77 QHVKFRVPNQPDT-GD----GNTVDIQQEQSAFMQNALEYQMSLGFLDSKFSGMKKAL  129 (132)
T ss_pred             CCCEEECCCCCCC-CC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             6540235787747-89----98114799999999999999999999999999999987