HHsearch alignment for GI: 254780380 and conserved domain: PRK12627

>PRK12627 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=99.56  E-value=5.6e-14  Score=91.63  Aligned_cols=119  Identities=22%  Similarity=0.245  Sum_probs=83.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH-HHHHHHHHCCCCC-----CCEECCC--CCC
Q ss_conf             9047888852156899999998988875312555566754332011000-1234322104754-----2100026--543
Q gi|254780380|r    1 MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-SFEEVMHGSGGVR-----VKKIGVD--QST   72 (134)
Q Consensus         1 m~~l~~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v-~~~~~~~~~~gv~-----~~~i~~~--~~~   72 (134)
T Consensus         2 ~~~-l~lf~l~~~~~~~la~Rq~ViA~NIANADTPg-------YkarDl~~F~~~l~~~~~~~~~~t~~~H~~~~~~~~~   73 (128)
T PRK12627          2 FEK-LEIFRMASAMARHAGERQAVIAQNVANADTPG-------YRARDLADFAETYASMTAGGLRATRPGHLNGAAAGAA   73 (128)
T ss_pred             CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-------CCHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             861-28999999999999999999997410379999-------8500004199999844122334477100156767778


Q ss_pred             CCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             10001432111250233330561099999999999999999999999999999999996469
Q gi|254780380|r   73 FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD  134 (134)
Q Consensus        73 ~~~~y~P~~p~Ad~~G~v~~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l~i~r~  134 (134)
T Consensus        74 ~~~~~~~~~~~~-~d----GN~V~le~Em~~~aen~~~Y~~~~~~~~~~~~~lrtAi--Gk~  128 (128)
T PRK12627         74 DPVVTDAGGPAS-PN----GNSVSLEEEMLRSAEAKRQHDRALAIYKSSMSLLRTSL--GRS  128 (128)
T ss_pred             CCCCCCCCCCCC-CC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCC
T ss_conf             764015899859-99----88355999999999999999999999999999999986--779