HHsearch alignment for GI: 254780380 and conserved domain: PRK12628

>PRK12628 flgC flagellar basal body rod protein FlgC; Provisional.
Probab=100.00  E-value=0  Score=287.84  Aligned_cols=131  Identities=27%  Similarity=0.432  Sum_probs=122.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH---------HCCCCCCCEECCCCC
Q ss_conf             90478888521568999999989888753125555667543320110001234322---------104754210002654
Q gi|254780380|r    1 MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---------GSGGVRVKKIGVDQS   71 (134)
Q Consensus         1 m~~l~~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v~~~~~~~---------~~~gv~~~~i~~~~~   71 (134)
T Consensus         1 M~-l~~~~~Ia~sgm~Aqr~Rl~viasNiANa~t~~~~~~-~~Y~~k~~vf~~~~~~~~~~~~~~~~~gV~v~~I~~~~~   78 (140)
T PRK12628          1 MS-LNAIFDIAASAMTAETVRLTTSAGNMSNANVEAGSPD-EVYQAKYPVFKSVQENANQWMGEQIKAGVKLDGIYESDA   78 (140)
T ss_pred             CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCEEECCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
T ss_conf             96-0778889999999999999999998863688888999-733531301344666554311555678748986663799


Q ss_pred             CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             31000143211125023333056109999999999999999999999999999999999646
Q gi|254780380|r   72 TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR  133 (134)
Q Consensus        72 ~~~~~y~P~~p~Ad~~G~v~~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l~i~r  133 (134)
T Consensus        79 ~~~~~YdP~hP~Ad~~GyV~~pnVn~~~EMvdm~~AsRsYEANv~v~~~aK~M~~~aL~IGk  140 (140)
T PRK12628         79 EPHRRYDPNSPIADKDGFVYTSNINYVEEMANIISASRSYQMNIELLNTTKQLMQRTLQLGE  140 (140)
T ss_pred             CCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             82203699999988898673489888999999999999999999999999999999986179