HHsearch alignment for GI: 254780380 and conserved domain: PRK12685

>PRK12685 flgB flagellar basal body rod protein FlgB; Reviewed.
Probab=99.49  E-value=3.6e-13  Score=87.45  Aligned_cols=110  Identities=20%  Similarity=0.242  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf             47888852156899999998988875312555566754332011000123432210475421000265431000143211
Q gi|254780380|r    3 YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP   82 (134)
Q Consensus         3 ~l~~ai~Ia~SgL~Aq~~Rl~~iA~NIANa~T~~~~~~~~~y~~~~v~~~~~~~~~~gv~~~~i~~~~~~~~~~y~P~~p   82 (134)
T Consensus         4 ~~d~~~~~~~~aLd~~~~Rq~via~NIANadTPg-------YKakdl~F~~~l~~~~~~~~~----~~~~~~~~~~~~~~   72 (116)
T PRK12685          4 NLDAALGVHPQTLDFRVERSKVLASNLANAETPG-------YKARDLDFKAVMSQINAGMQP----KQQYELSYRVPYQN   72 (116)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-------CCCCCCCHHHHHHHHHCCCCC----CCCCCCCCCCCCCC
T ss_conf             3898865789999999999999986033168999-------876658899999998568998----87877541689886


Q ss_pred             CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             12502333305610999999999999999999999999999999999
Q gi|254780380|r   83 VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL  129 (134)
Q Consensus        83 ~Ad~~G~v~~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l  129 (134)
T Consensus        73 ~~DG------N~Vdld~Em~~~aeN~l~Y~a~~~~l~~~~~~lk~AI  113 (116)
T PRK12685         73 SADG------NTVELGKEQARYSQNAMDYQTSLTFLNMKISGLKSAI  113 (116)
T ss_pred             CCCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999------8537899999999999999999999999999999986