HHsearch alignment of GI: 254780380 and MMDB domain: 1ucu_A_1-40_455-494

>1ucu_A (A:1-40,A:455-494) Phase 1 flagellin; flagellar filament, cryo-electron microscopy, helical reconstruction, structural protein; 4.00A {Salmonella typhimurium}

Probab=93.37  E-value=0.13  Score=27.36  Aligned_cols=42  Identities=21%  Similarity=0.303  Sum_probs=39.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             056109999999999999999999999999999999999646
Q gi|254780380|r   92 YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR  133 (134)
Q Consensus        92 ~snVd~~~Em~~m~~a~r~yean~~~~~~~~~m~~~~l~i~r  133 (134)
                      ..++|.+.||+++...+-..++...++..+.++-+..|.|+|
T Consensus        39 sADaD~A~E~~~~tk~qIL~Qa~~amLaQAN~~pq~vl~LLq   80 (80)
T 1ucu_A           39 SADSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR   80 (80)
T ss_dssp             TSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             CCHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
T ss_conf             821319999999999999999999999997416789998409