HHsearch alignment for GI: 254780381 and conserved domain: PRK05681

>PRK05681 flgC flagellar basal body rod protein FlgC; Reviewed.
Probab=99.94  E-value=1.3e-26  Score=160.97  Aligned_cols=128  Identities=20%  Similarity=0.176  Sum_probs=105.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC------CCCCCCCCHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             96014899999999999999999996310013777------6533221056766544-3211346651134566655555
Q gi|254780381|r    1 MQPITFFQIASQHANWLSERQKIVSENIANASTPN------YRAKDISSFETILNQN-FLMARTHETHLKESDSSGLHWN   73 (130)
Q Consensus         1 m~~~~~f~~~~~~l~~~~~R~~via~NIANadTPg------Yk~~dv~~F~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~   73 (130)
T Consensus         1 M~~~~~~~ia~sgl~aq~~rl~~~a~NiAN~~tt~t~~g~pYr~k~vv-f~~~~~~~~~~~~~~~gV~v~~i~~d~~~~~   79 (139)
T PRK05681          1 MSLFSSFNIAGSGLSAQSQRLNVISSNIANADSTAGPDGDPYRRKQVV-FAAFGSAELDRGQGTGGVKVAKIVEDQSPFK   79 (139)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCCCCCCEEEEEEECCCCCHH
T ss_conf             953888999999999999999999985532677789999876431245-5303310002467877658877743897422


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             57677776588776447652008999999999999999999999999999999636
Q gi|254780381|r   74 AHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR  129 (130)
Q Consensus        74 ~~~~~~~~~~~~~~~~dgn~Vdl~~Em~~~~~~~~~Y~a~~~~~~~~~~~~~~al~  129 (130)
T Consensus        80 ~~YdP~hP~AD~~GyV~~pNVd~~~Emvdm~~A~R~YeAN~~~~~~~k~m~~~~L~  135 (139)
T PRK05681         80 LVYDPGHPAADAKGYVKYPNVNVVVEMVDMISASRSYEANVEVLNAAKSMMQKTLT  135 (139)
T ss_pred             HHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             30478998888667154289888999999999999999999999999999999998