HHsearch alignment for GI: 254780381 and conserved domain: PRK05682
>PRK05682 flgE flagellar hook protein FlgE; Validated.
Probab=98.20 E-value=1.2e-06 Score=54.51 Aligned_cols=43 Identities=21% Similarity=0.341 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99999999999999999963100137776533221056766544
Q gi|254780381|r 8 QIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51 (130)
Q Consensus 8 ~~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~~F~~~l~~~ 51 (130)
T Consensus 4 ~tgvSGl~a~~~~l~visnNiAN~nT~GyK~~~~-~F~~~~~~~ 46 (414)
T PRK05682 4 NTGVSGLNAASNDLDVIGNNIANANTTGFKESRA-EFADLYANS 46 (414)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCC-CHHHHHHHC
T ss_conf 8999999999860167767787677530087755-167865212