HHsearch alignment for GI: 254780381 and conserved domain: PRK05841
>PRK05841 flgE flagellar hook protein FlgE; Validated.
Probab=97.99 E-value=2.2e-06 Score=53.17 Aligned_cols=42 Identities=14% Similarity=0.180 Sum_probs=39.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 447652008999999999999999999999999999999636
Q gi|254780381|r 88 QVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129 (130)
Q Consensus 88 ~~dgn~Vdl~~Em~~~~~~~~~Y~a~~~~~~~~~~~~~~al~ 129 (130)
T Consensus 561 aLE~SNVDLa~Eft~mIvtQR~yQANsKvITTsD~mLqelin 602 (605)
T PRK05841 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 (605)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCHHHCEEEEEHHHHHHHHHH
T ss_conf 620133058999999999876520541278768999999986