HHsearch alignment for GI: 254780381 and conserved domain: PRK06799
>PRK06799 flgK flagellar hook-associated protein FlgK; Validated.
Probab=97.41 E-value=0.00033 Score=41.59 Aligned_cols=40 Identities=18% Similarity=0.213 Sum_probs=36.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 7652008999999999999999999999999999999636
Q gi|254780381|r 90 SGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129 (130)
Q Consensus 90 dgn~Vdl~~Em~~~~~~~~~Y~a~~~~~~~~~~~~~~al~ 129 (130)
T Consensus 390 svsGVnlDEE~~nLl~~QqaY~A~AkvIst~demldtLLn 429 (431)
T PRK06799 390 SLEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFS 429 (431)
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2538388899999999999999999999999999999984