HHsearch alignment for GI: 254780381 and conserved domain: PRK08471
>PRK08471 flgK flagellar hook-associated protein FlgK; Validated.
Probab=97.37 E-value=0.00041 Score=41.07 Aligned_cols=41 Identities=20% Similarity=0.205 Sum_probs=37.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 47652008999999999999999999999999999999636
Q gi|254780381|r 89 VSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129 (130)
Q Consensus 89 ~dgn~Vdl~~Em~~~~~~~~~Y~a~~~~~~~~~~~~~~al~ 129 (130)
T Consensus 569 ~svSGVnlDEE~~nLik~QqaY~AsArvista~em~dtLL~ 609 (612)
T PRK08471 569 QSISGVSTDEELTNLIKFQSSYGAAAKIITTVDQMLDTLLG 609 (612)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 85106039999999999999999999999999999999982