HHsearch alignment for GI: 254780381 and conserved domain: PRK12624
>PRK12624 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=100.00 E-value=1.6e-34 Score=203.03 Aligned_cols=125 Identities=19% Similarity=0.328 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC-----------CCCCCCCCCCCCCCCC
Q ss_conf 01489999999999999999999631001377765332210567665443211-----------3466511345666555
Q gi|254780381|r 3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMA-----------RTHETHLKESDSSGLH 71 (130)
Q Consensus 3 ~~~~f~~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~~F~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~ 71 (130)
T Consensus 7 f~kT~~lL~kaLd~~~~Rq~vIa~NIAN~dTPgYK~~dv-~Fe~~L~~al~~~~~~~~~~~~~~~t~~rHi~~~~~~~-- 83 (143)
T PRK12624 7 FMKTQDLLERGMNNSIQKRKVISDNIANADVPHFKRSEV-IFESMIKRAIESEKIEKEKEVPTQISDERHIQFFKPLD-- 83 (143)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC--
T ss_conf 026999999999999999999986011268999763206-29999999986022234445666668722125678887--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 55576777765887764476520089999999999999999999999999999996369
Q gi|254780381|r 72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG 130 (130)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~dgn~Vdl~~Em~~~~~~~~~Y~a~~~~~~~~~~~~~~al~G 130 (130)
T Consensus 84 ~~~~~~~~~~d~~t~~r~DGNnVDid~Em~~la~N~l~Y~al~~~l~~~~~~lr~vIk~ 142 (143)
T PRK12624 84 YREVQPKTNLDYLTTMRADGNNVDVEKEVVEASNSQMQYMLMIERLNQNYRLLKQVMRM 142 (143)
T ss_pred CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 34467424304676558998726899999999999999999999999789999999736