HHsearch alignment for GI: 254780381 and conserved domain: PRK12625

>PRK12625 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=100.00  E-value=2.9e-33  Score=196.37  Aligned_cols=121  Identities=23%  Similarity=0.305  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH------HHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             01489999999999999999999631001377765332210567665443------211346651134566655555576
Q gi|254780381|r    3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF------LMARTHETHLKESDSSGLHWNAHV   76 (130)
Q Consensus         3 ~~~~f~~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~~F~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~   76 (130)
T Consensus         5 fd~~~~~~~~aL~~~~~Rq~via~NIANadTPgYKa~dl-~Fe~~L~~a~~~~~~~~l~~T~~~H~~~~~~~~~~~---~   80 (132)
T PRK12625          5 FDKALGVHQYTLGIRAQRAEVISSNIANADTPHYKARDV-DFSAAMQAARSQQQGLEMTGSDEKHFDLAALTGQHV---K   80 (132)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC---E
T ss_conf             888861789999999999999987143068999886538-899999998754788866547745467767787654---0


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             777765887764476520089999999999999999999999999999996369
Q gi|254780381|r   77 IEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG  130 (130)
Q Consensus        77 ~~~~~~~~~~~~~dgn~Vdl~~Em~~~~~~~~~Y~a~~~~~~~~~~~~~~al~G  130 (130)
T Consensus        81 ~~~---~~~~~~~DGN~Vdid~Em~~~aeN~l~Y~a~~~~l~~k~~~l~~aI~G  131 (132)
T PRK12625         81 FRV---PNQPDTGDGNTVDIQQEQSAFMQNALEYQMSLGFLDSKFSGMKKALRG  131 (132)
T ss_pred             EEC---CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             235---787747899811479999999999999999999999999999998758