HHsearch alignment for GI: 254780381 and conserved domain: PRK12637
>PRK12637 flgE flagellar hook protein FlgE; Provisional.
Probab=98.04 E-value=2.8e-06 Score=52.66 Aligned_cols=44 Identities=23% Similarity=0.351 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 999999999999999999963100137776533221056766544
Q gi|254780381|r 7 FQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQN 51 (130)
Q Consensus 7 f~~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~~F~~~l~~~ 51 (130)
T Consensus 3 ~~~GvsGl~a~~~~l~vi~nNiAN~~T~gfK~~~~-~F~~~~~~~ 46 (473)
T PRK12637 3 FGQGLSGLNAASQNLDVIGNNIANSGTVGFKSGAA-SFADVYASS 46 (473)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC-CHHHHHCCC
T ss_conf 77899999998855325514767377600085667-166754558