HHsearch alignment for GI: 254780381 and conserved domain: PRK12714
>PRK12714 flgK flagellar hook-associated protein FlgK; Provisional.
Probab=98.66 E-value=2e-08 Score=64.03 Aligned_cols=42 Identities=21% Similarity=0.339 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 1489999999999999999999631001377765332210567
Q gi|254780381|r 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFET 46 (130)
Q Consensus 4 ~~~f~~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~~F~~ 46 (130)
T Consensus 1 msll~ig~sgL~a~Q~al~vt~~NIAN~nT~GYsRq~v~-~~~ 42 (624)
T PRK12714 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVE-FAT 42 (624)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE-EEC
T ss_conf 971789999999999999988475651689980312778-751